LOCUS       DATIRS010000001         1825 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1081624, whole genome shotgun sequence.
ACCESSION   DATIRS010000001 DATIRS010000000
VERSION     DATIRS010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1825
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1081624"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1032
                     /locus_tag="VLM90_00005"
     CDS             <1..1032
                     /locus_tag="VLM90_00005"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HSQ11362.1"
                     /translation="YGQIAMAAAVPAALYYLALFTQVDLEAAKHGLGGLPKDQIPKFR
                     GVIRIGWVFLFPLGFLVYVLMWENWEAGKAGMATVILTFIVGALQKETRPTLRKILGC
                     IEDTGRTLLDIVVITALAGLVIGALQLSGLTFKLSLILVALSGGNVLALLALTAIVCI
                     LLGMSMPTAVVYITLAVLVGPALAQLGIDPLAAHLFLFYFGMLSLITPPDCLATYTAA
                     AIAGSDFWQTGWTGMRLGIAAYVVPFVFALHPALILKGPLGEIIFAVVACAIGTFLLA
                     VGCAGYLYRLLNWPKRALFCLAGLMLMLPTWQGAWLIFDAGGLLLGVGLFLWERSKAS
                     ASVSSAQFT"
     gene            complement(1025..>1825)
                     /locus_tag="VLM90_00010"
     CDS             complement(1025..>1825)
                     /locus_tag="VLM90_00010"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ11363.1"
                     /translation="ASLISGDLEVGYTGGTSVLGAAAAGPYLKILSSISSKLTHTMLA
                     NPSLKTAEQLRGKRFGIQSMGGTTWMHTILGLEHVGLDVKRDNINILMIGDSVLIGQA
                     LEAGRVDAAVLDGVLARRLISKGFSVIVDLTPFNIPMVNQAVVVAPDFVQKRPELAER
                     ILMVLVDSLAFTLAPMNRSVVIKTIMRRLQIDDPKVGEEGYQDLMTSIERKPFPSLEG
                     LRNIRRLMATQNPKAANVKVEELIDARIIRKLDENGYMDKVAAGYGLK"
BASE COUNT          313 a          551 c          529 g          432 t
ORIGIN      
        1 tatggccaga tcgctatggc cgccgcggtt ccggccgcgc tttactacct cgcgctgttc
       61 acgcaggtcg atctcgaagc ggccaagcac ggcctcggcg gactgccgaa ggatcagata
      121 ccgaaatttc gcggcgtgat caggatcggc tgggtctttc tctttccact tggttttctg
      181 gtctatgttt tgatgtggga gaactgggaa gctggcaaag ccggaatggc gacggtcatc
      241 ctcaccttta tcgtcggcgc cttgcaaaaa gagacgcgtc cgaccctccg aaaaattctc
      301 ggttgcatcg aagacaccgg ccgcactctg ctcgatatcg tcgtcatcac cgcgttggcc
      361 gggctggtca tcggcgcgct gcaactatca gggttgacgt tcaaattgtc gctgatcttg
      421 gtcgccctgt ccggcggcaa cgtcctcgcg ctcttagctc tgacagccat cgtgtgcatt
      481 ctcctgggaa tgtcgatgcc gacggccgtg gtctacatca ccctcgcggt tctcgtcggc
      541 ccggccctcg cgcagctcgg tatcgacccg ctcgccgccc atttatttct tttctatttc
      601 ggcatgctgt ccctcatcac gccacccgac tgtctggcaa cgtacacggc cgcggctatc
      661 gccggctcag acttctggca aaccggctgg accggcatgc gcctcgggat cgccgcgtac
      721 gtagtgccct ttgtcttcgc gctgcatccg gcgttgattc tcaagggccc gctgggcgaa
      781 atcatctttg ccgtcgtcgc ttgcgcgatc ggaacatttc tcctcgccgt cggctgcgcc
      841 ggctatctat atcgcttgct caattggccc aagcgcgccc tattctgcct ggctggtcta
      901 atgctaatgt tgcctacttg gcaaggcgcc tggctgatct tcgacgccgg cggattactt
      961 ttgggggttg gtttgttcct ttgggagcga agcaaagcat ccgcgagcgt atctagcgct
     1021 caattcactt gagcccatac cccgccgcga ctttgtccat gtaaccgttc tcgtcgagct
     1081 tgcggatgat ccgggcatcg atcagctctt cgaccttgac gtttgcggct ttaggatttt
     1141 gcgtggccat gagccggcga atattgcgca gcccttcgag tgaaggaaac ggtttgcgct
     1201 cgatgctcgt catcagatcc tgataacctt cctcgccgac cttggggtcg tcgatctgaa
     1261 gccggcgcat gatggttttg atcacgacgc ttctgttcat cggcgccaag gtaaaagcca
     1321 ggctatccac caacaccatg agaatacgtt cggcgagctc gggacgcttt tggacaaaat
     1381 cgggggccac gacaacggcc tggttgacca tgggaatatt gaacggcgtg agatcgacga
     1441 tgaccgagaa tcccttgctg atcagcctac gcgccagcac gccgtcgagc accgcggcgt
     1501 cgacccggcc ggcctcgagc gcttggccga tcagcaccga gtcgccgatc atcagtatgt
     1561 tgatgttgtc tcgtttgacg tcgaggccga catgttcgag gccgagaatg gtgtgcatcc
     1621 atgtggtgcc gcccatgctc tggatgccga agcgcttgcc gcgcaattgc tcggcggtct
     1681 tgagactcgg attggcgagc atcgtatgcg tgagcttgct ggagatcgag gagagaattt
     1741 ttaggtacgg ccctgccgcc gccgcaccga gcacagatgt gccgccggtg tagccgactt
     1801 cgagatctcc ggagatgaga ctggc
//
LOCUS       DATIRS010000002         2917 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1376643, whole genome shotgun sequence.
ACCESSION   DATIRS010000002 DATIRS010000000
VERSION     DATIRS010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2917
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1376643"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            195..653
                     /locus_tag="VLM90_00015"
     CDS             195..653
                     /locus_tag="VLM90_00015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11364.1"
                     /translation="MAYENGRSMDERVTSLFQPDTLLPDQYLDTFRRKLHLEPEKKLM
                     LAILEDAVSCFQKYLFAGDSKGRAQFRDTEDWVFQRDDSGVFSFSIVCETLGLNPNYL
                     RRGLAQWQQQRVAQQGQGQVIQLRPLRDKPRRGMAISGRPKPRLRRAAGR"
     gene            764..1795
                     /locus_tag="VLM90_00020"
     CDS             764..1795
                     /locus_tag="VLM90_00020"
                     /inference="COORDINATES: protein motif:HMM:NF015251.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HSQ11365.1"
                     /translation="MARLKRRRSPLGQFLYDLRYRVGEYWLRGFVAGMTYIPFRVVER
                     FTTLLAWLSFKLMSQYRRRMEENIALTLGKEFPSEAARKDLVRRAWKSFARGVLDTTA
                     VMHHSKARIVGSIRLDGEEHLQNALAKGKGVFALSAHLGSFTMIGPRLAAAGYPFSVV
                     VKHPGDERFARLTDDYRSQLGIQTIPAKPRRQAVRGMLKALRENRIVLVIADEFKSGD
                     VMVEFFGMQLPAPRGPATLALRTGAVTLPMFATREGDDSLLLSVGAAIAAVEGEDLEA
                     SVVATTAVYTRYLEAAIRRYPDQWNWLGLPNRNGKLSRAELALRRKEANKNADIGNAS
                     ETKKTGTGV"
     gene            complement(2034..2636)
                     /locus_tag="VLM90_00025"
     CDS             complement(2034..2636)
                     /locus_tag="VLM90_00025"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSQ11366.1"
                     /translation="MMQRYDYLKAIGASSQDALVVSTGWGSREWWAVRPGDGNLKTRT
                     LGLVSSIAAGLAIALPHRKVIAIDGDGAFLMNLCGLPTIAQQSPGNLVHLLFDNEIYE
                     ASGGTATASRSTDAVAIAKGAGYPHAMWVDSLETFRGEFLRAWERNELTLIAVKVDPG
                     QPKDLPPLKLDEIENKYRFMRYLEATENKGILNPGFDSKL"
     gene            complement(2633..2845)
                     /locus_tag="VLM90_00030"
     CDS             complement(2633..2845)
                     /locus_tag="VLM90_00030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11367.1"
                     /translation="MIYYAGDIGDRGFTTLGAVTEPVLQAMGFRSYVLRKPEDIEEVL
                     AGAQILADDSKKPVAVLLTKSVLGVK"
BASE COUNT          577 a          830 c          886 g          624 t
ORIGIN      
        1 gatgatcggc gtgtggagcg aagtgcagca gaagattaac gcagtgctca gtgggacgac
       61 gattgcgggc ttgcgacgtt taccctgtcg ggaatttatt ggctcctctt ctctttcgag
      121 tgcggcgtag ccgggatgcg aaatttcgtg ttgcaaccgg gatctaggcc gcgccctaac
      181 gggaggtggt tttcatggct tacgagaatg gacggagtat ggacgagcgg gtgacttcac
      241 tgtttcagcc ggacacactg ctgccggatc aatatctcga taccttccgg cgcaagctgc
      301 acttggagcc ggagaaaaag ctcatgctgg cgattctgga ggatgccgtc tcctgttttc
      361 aaaaatattt gttcgccggc gacagcaagg gcagggccca gtttcgcgac accgaggatt
      421 gggtttttca gcgcgacgat tcaggagtct tctccttcag tatcgtctgc gagacgttgg
      481 ggctcaatcc taactacctg cgccgcggct tggcgcaatg gcaacagcag cgcgtcgccc
      541 agcagggcca ggggcaagtg attcaactac ggccgctgcg cgataaaccg cgccgtggca
      601 tggcgatttc cggccggcct aaaccccggc tgcgccgggc cgcaggccgc taatcgatca
      661 ttcgatttac ctcaacaccg gcagcaatgg gattaaccca atgccgccgg tttcgcttta
      721 gcgcgagctt gaaaagccca ccaaacgaat tcatagatta ttcatggcta ggttaaagcg
      781 gcggcgctcg ccgctcggac agtttcttta cgacttgcgc taccgtgtcg gcgaatattg
      841 gttgcgcgga ttcgtcgctg gtatgactta cattcccttt cgagtcgtcg agcggtttac
      901 cacgctgctg gcttggcttt ccttcaagct gatgtcccag taccgccggc gcatggaaga
      961 aaacatcgcc ttgaccttgg gcaaggaatt tcctagcgag gcggcacgta aggatttggt
     1021 tcggcgcgct tggaaaagct ttgcccgcgg tgtgctcgat actacggcgg tcatgcatca
     1081 ttcgaaagcg cggatcgtcg gcagcattcg actcgacggc gaagagcatc tgcaaaacgc
     1141 cttggccaaa ggcaaaggcg tcttcgccct gagcgcgcat ctcggcagtt tcaccatgat
     1201 cggcccgcgt ctggcggcgg cgggctatcc cttcagcgtg gtggtgaaac atccgggcga
     1261 tgaacggttt gcccggctca ccgacgacta ccggtcgcag ctcggcattc aaacgatccc
     1321 cgccaaacca cggcgtcaag cggtacgcgg aatgctcaag gcgctgcgcg aaaatcgcat
     1381 cgtgctggtg atcgccgatg agttcaagtc gggcgacgtg atggtggaat tttttggcat
     1441 gcaactgccg gcgccgcgcg gcccggcgac gctggctctg cgcaccggcg ccgtcacctt
     1501 gcctatgttc gctacccgcg agggcgacga ttctttgcta ttgtcggtgg gcgctgccat
     1561 cgccgcggtg gagggtgaag atctcgaagc gagtgtggtg gcgaccacgg cggtctacac
     1621 aaggtacctc gaagcggcga ttcgccgcta ccccgatcag tggaattggc tcggcttacc
     1681 caatcgcaat ggtaaattat cgcgtgccga actggcgctg cgcaggaaag aagcgaataa
     1741 aaatgccgat atcggcaacg cctccgaaac gaaaaaaacc ggcaccggcg tttaaccgga
     1801 aggtggcgat tggcattggc gcgaggcgca atctttccat cgtgaagaca ctggattgcc
     1861 gccctgagca agtaacgatc cctgctgttt tgcggttcac ccgcgagcaa agcaacggtg
     1921 tggcctactc tcagaatgac tttgtaaccg gatgcttggg tgtcttcata actccagggc
     1981 cgtgcctcgc gcggccggcg cgcagcgcac ccggtggcat tctaacccgc cgtttataat
     2041 tttgagtcga atcccggatt cagaatgcct ttgttctcgg tggcttccaa gtagcgcatg
     2101 aagcggtatt tgttctcgat ctcgtcgagt tttagcggcg gtaaatcttt gggctggccg
     2161 ggatcgactt tcacggcgat caaggtcagc tcgttgcgct cccaggcgcg caggaattca
     2221 ccgcgaaacg tttccagtga gtcgacccac atggcgtgtg ggtaacccgc tcctttggcg
     2281 atggccaccg catcggtgct gcgcgacgcg gtagcggtgc cgccggacgc ttcatagatt
     2341 tcattgtcaa aaagcaaatg aacgagattt cccgggctct gttgggcaat ggtcggcagg
     2401 ccgcataggt tcatcaaaaa ggcgccgtcg ccatcgatgg caatcacttt gcgatgcggt
     2461 aaagcgatgg ctaaacctgc ggcgatggag gaaaccaagc cgagggtgcg ggtcttgaga
     2521 ttgccgtcgc cagggcgcac ggcccaccat tcgcgcgagc cccaaccggt ggataccacc
     2581 agggcgtcct gcgacgacgc accgatcgct tttagatagt cataccgttg catcatttta
     2641 ctcccaggac gctcttggtc agcagcaccg ccaccggttt tttcgaatcg tcagcgagaa
     2701 tctgcgcgcc ggccaggacc tcctcgatgt cttctggctt gcgcaacacg tagctgcgga
     2761 accccatcgc ctgcaagact ggttcggtga ccgcgccgag ggtggtaaag ccgcggtcgc
     2821 cgatatcgcc ggcgtagtag atcatccagc gcttcgccta ttacgtctgg gccgggctcg
     2881 gctgctggta ctacatccgg cgcaagggga aggtgga
//
LOCUS       DATIRS010000003         2878 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1278319, whole genome shotgun sequence.
ACCESSION   DATIRS010000003 DATIRS010000000
VERSION     DATIRS010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2878)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2878)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2878
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1278319"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..779
                     /locus_tag="VLM90_00035"
     CDS             <1..779
                     /locus_tag="VLM90_00035"
                     /inference="COORDINATES: protein motif:HMM:NF040249.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HSQ11368.1"
                     /translation="WTKRLHPGWSAHGGVIATLLAQEGFRGPAKVFEGTNGFFPSFGG
                     KNDYRYEKITELGKVWEIPRLTFKSYPCGSISHPYMDCALKIRQRHGPAPARIRQVVC
                     RTAEGPVHRLWEPLADKQKPISSYGAKFSLPYSIAVMLVHGRAGLEEFSDEAIHDAEV
                     LGLAAKVGYELDATIDYPRHFSGHVKVYLDDGTVLEENQPHPRGGLEDPLPPSDIESK
                     FRANAKLAIPTERVEKVLDAVQHLQQLSSTRELSDLLCQS"
     gene            823..1476
                     /locus_tag="VLM90_00040"
     CDS             823..1476
                     /locus_tag="VLM90_00040"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HSQ11369.1"
                     /translation="MTKRSMVRAAGYVFIVIASLGCGGDSFDNVRNLRSTNEAIVCLG
                     DSLTEGVGANGGEDYPAVLSLELAFPVRNHGRRGDTTKLALARLSEVLAGNPRLVIVL
                     LGGNDFLRQVPRAETKQNLGEMVRRIQAQGALVAIAGMRLGIFTDEYGPIYEETAKQF
                     GAYYIPQVMQGILTDAQLKSDPIHPNGAGYRLMGPRIAEKIRPLLREADRLTGRRGF"
     gene            complement(1424..2365)
                     /locus_tag="VLM90_00045"
     CDS             complement(1424..2365)
                     /locus_tag="VLM90_00045"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HSQ11370.1"
                     /translation="MKSWQPHQRLLLYLLLALALACAISPILSLGADWFMTQWPALMP
                     QRIPFHRTFDRAFMISGILLFIVGRRALIPARLKDLWRVGAAPASRDFAVGLGLALAS
                     MFLVIAAMTVAEVFTPFLRLTSSVAVERVARAAAAGIFAGVFEEIFFRGILFMGLRTR
                     SYDVRAYLLANLFYAALHFVRPGDAYFLDSLDLGAGFRHLGYTFTPFLDPLSLLPGLI
                     GLLLGGAVLSFAVERAGNLYLAIGLHAGWVFCLKALRVFGDFQREGLGWLFGSSDPKF
                     VSCVATWAAILLAGVAVYYLTKSRAVRSNDLPRAAAA"
     gene            2398..>2878
                     /locus_tag="VLM90_00050"
     CDS             2398..>2878
                     /locus_tag="VLM90_00050"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ11371.1"
                     /translation="MASSGDKKLLGKVALITGGSRGIGRAIAAAYADQGAQVFICGRD
                     PTEINRAVAEIRQSGGEIAGVPGDIGNATDVRRIVAAALVRFAAIDILVNNAGILGPR
                     VAIADYPIADWEEVLRINLNGVFFITREVLPIMLARKGGAVINLTSGVGRLGKARWGA
                     "
BASE COUNT          618 a          812 c          903 g          545 t
ORIGIN      
        1 cctggaccaa gcgtttacac ccaggttggt cggcccatgg cggcgtcatc gcgacgctct
       61 tggcccagga gggctttcgc ggaccggcga aagttttcga aggcaccaac ggtttctttc
      121 cgtccttcgg cggcaagaac gattaccgct atgaaaaaat caccgagctc ggcaaagtct
      181 gggagattcc caggctgacc tttaaatctt atccctgcgg ttcgatctct catccctaca
      241 tggattgcgc cctcaagatt agacagcggc atgggccggc gccggcgcgg ataagacaag
      301 tcgtgtgccg caccgccgag gggccggttc atcggctgtg ggagccgctg gcagacaaac
      361 agaagccgat cagttcctat ggcgccaagt ttagtttgcc ctacagcatc gcggtgatgt
      421 tagtgcacgg gcgggccggc ttggaggagt ttagcgacga agcgattcac gatgccgaag
      481 tcttaggtct cgcggctaaa gttggttatg aactcgatgc gaccatcgat tatccgcgcc
      541 acttttccgg ccatgtcaaa gtttatctcg acgacggcac tgtgctcgaa gagaaccagc
      601 cccatccgcg cggcggcttg gaagatccat tgccgccctc cgacatcgag tcgaagttcc
      661 gcgccaacgc caagctagcg atacccacgg agcgggtcga aaaagttctc gacgcggtgc
      721 agcatttgca gcagttatct tcgacccgag agctgagcga tctgctgtgt cagtcatgac
      781 gctttacccg gcttctgcct agcggtgcag ttggtcctgg ccatgaccaa gcgaagtatg
      841 gtgcgcgccg ccggttatgt ttttatcgtt attgcgtcac tcggttgcgg tggcgacagc
      901 tttgataacg tgcgtaactt gcgatcgacg aacgaggcga tcgtctgttt gggtgacagc
      961 ttgaccgaag gcgtcggtgc caacggcggc gaagactatc ctgcggtgct gtcgctcgaa
     1021 ctggcctttc cggtgcgcaa ccatggccgg cgcggcgaca ccacgaagct ggcgctggcg
     1081 cggttatcgg aagtcctcgc gggcaatccg cggctggtga ttgttttatt gggcggcaac
     1141 gatttcttgc gccaggtgcc gcgcgcggag acgaagcaga atttagggga gatggtgcgg
     1201 cgcattcagg cgcaaggagc cctggtggcg atcgccggca tgcggcttgg gatatttaca
     1261 gatgaatacg gcccgatcta cgaagagacc gccaagcagt tcggcgccta ctacattccc
     1321 caggtgatgc aaggaattct taccgacgcc cagctcaaaa gcgatccgat ccatcccaat
     1381 ggcgcgggct atcgcttgat ggggccgcgc atcgccgaga aaatcaggcc gctgctgcgc
     1441 gaggcagatc gtttgaccgg acggcgcggc ttttagtcaa gtaatatacc gccacgccgg
     1501 ccaatagaat cgccgcccag gtggctacgc agctgacgaa tttcggatcg ctggagccga
     1561 agagccagcc taagccttcg cgttggaagt cgccgaagac tcgtaaagct tttaagcaaa
     1621 acacccatcc cgcgtgcaag ccgatggcga gatacaaatt gccggcgcgc tccacggcaa
     1681 atgataatac ggcgccgccg agcagtagtc cgatcaggcc gggtagtagt gacagcgggt
     1741 cgagaaatgg cgtgaaggtg taccccaagt ggcggaagcc ggcgccgagg tcgaggctgt
     1801 caagaaagta ggcatcgccc ggtctgacga aatggagcgc ggcataaaat aagttggcca
     1861 ggagataggc gcggacgtcg tagctccggg tgcgtagtcc catgaacaag atgccgcgaa
     1921 aaaatatttc ctcgaacacg ccggcaaata ttcccgccgc cgcggccctg gcaactcgtt
     1981 cgacggcgac cgaacttgtg aggcgaagaa acggcgtaaa gacttcggcc acggtcatcg
     2041 cggcgatgac caggaacatt gaagccaacg ccaagccgag gccgacggca aagtctcggc
     2101 tcgctggggc agcgccgacc cgccacaggt cttttaaccg cgcgggaatc agcgcgcgcc
     2161 ggccaacaat gaacagcagg ataccggaaa tcatgaaggc gcgatcgaag gtgcgatgga
     2221 acggaatgcg ctgcggcatt agcgccggcc actgggtcat gaaccagtcg gcgcccagcg
     2281 acaagatcgg gctgatggcg caagcgaggg cgagcgcgag caacaggtag agtagtaatc
     2341 gctggtgcgg ttgccacgat ttcatgaatc tttcaactat gttatagcga caaaacgatg
     2401 gcaagtagcg gcgacaaaaa actcctcggc aaggtcgcgc tgatcaccgg cggcagccgt
     2461 ggcatcggcc gtgccatcgc cgcggcctat gcggatcaag gcgcccaagt gtttatctgc
     2521 gggcgtgatc caacggaaat taatcgcgcg gtggcggaaa ttcgccaatc cggtggcgag
     2581 atcgctggag tcccgggcga tatcggcaac gccacagacg tccggcgcat cgtcgctgcc
     2641 gcgctggtga gatttgccgc catcgatatc ttggtcaaca acgccggcat cctcggaccg
     2701 cgggtggcga tcgccgatta tccgatcgcc gactgggaag aagtcttgcg gatcaatctc
     2761 aatggggtgt tttttattac ccgcgaagtt ttgccgatca tgttggcgcg caagggcggc
     2821 gccgtcatta acctgacttc gggtgtcggc cgacttggca aggcgcgctg gggcgcct
//
LOCUS       DATIRS010000004         1694 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1671726, whole genome shotgun sequence.
ACCESSION   DATIRS010000004 DATIRS010000000
VERSION     DATIRS010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1694
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1671726"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..863
                     /gene="cysD"
                     /locus_tag="VLM90_00055"
     CDS             <1..863
                     /gene="cysD"
                     /locus_tag="VLM90_00055"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR02039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004781 - sulfate adenylyltransferase
                     (ATP) activity [Evidence IEA];
                     GO_process: GO:0019419 - sulfate reduction [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HSQ11372.1"
                     /translation="IEIFREVAATAARPVMLYSIGKDSSVMLRLAQKAFYPGPMPFPL
                     LHIDTGWKFREMIAFRDRVVEEIGCQLIRYTNPRGAAEGIGPFTHGSAFHTDVMKTEA
                     LKQALDLHGFDVAFGGARRDEEKSRAKERIFSFRAPGHRWEPKAQRPELWNLYNTRIH
                     PGESIRVFPLSNWTEADIWGYIQQEQIPIVPLYFAAPRPVVQRYGQWIMVDDHRLPLE
                     PGEAPELRLVRFRTLGCYPLTAAVESSAVTLTEIVAETLGATTSERQGRVIDHDGAGS
                     MERKKQEGYF"
     gene            863..>1694
                     /locus_tag="VLM90_00060"
     CDS             863..>1694
                     /locus_tag="VLM90_00060"
                     /inference="COORDINATES: protein motif:HMM:TIGR02034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HSQ11373.1"
                     /translation="MDILRFITCGSVDDGKSTLIGRLLYETKLIFEDQLEALMADSKK
                     FGTQGERLDLALLVDGLQAEREQGITIDVAYRFFSTSKRRFIVADTPGHEQYTRNMAT
                     GASTADAAVLLIDARKGVLTQTKRHSRIAAMFGVRHIALAVNKMDLVDWSQSRFEEID
                     AAYRQFAQDLEFSSITAIPLSALEGQNILEPAPATMPWYHGQSLLHWLETVPSAEREL
                     TKPFTMPVQWVNRPNLDFRGFSGRIGSGSLRPGDRVRVSPSGVVSGVKEISVWGGPLP
                     E"
BASE COUNT          339 a          498 c          508 g          349 t
ORIGIN      
        1 ccatcgaaat cttccgcgag gtggcggcga cggcggctcg gccggtgatg ctctactcca
       61 tcggcaagga ctcctcggtg atgttgcggc tggcgcagaa ggccttttat ccggggccga
      121 tgccgttccc gctgctgcat atcgataccg gttggaagtt tcgtgagatg atcgccttcc
      181 gcgaccgggt tgtcgaagaa atcggctgcc aattgattcg ctataccaat ccgcgcggtg
      241 ctgccgaagg gataggtccg ttcacccatg gctcggcatt tcataccgat gtcatgaaga
      301 ccgaagcgct gaagcaagcg ctcgatctgc acggcttcga cgttgctttc ggcggcgccc
      361 ggcgcgatga ggagaagtcg cgcgccaagg aaagaatttt ttccttccgt gcgccgggcc
      421 atcgctggga gcccaaagcc cagcggccgg aactgtggaa cctgtacaac acgcgaatcc
      481 atccaggcga atcgatccgg gtatttcctt tgtccaattg gaccgaggcg gatatttggg
      541 gctacattca gcaggaacag attcccatcg tgccgctcta tttcgcggcc ccgcggccag
      601 tggttcaacg ctacggccaa tggatcatgg tggacgacca taggctgcca ctcgaaccgg
      661 gggaggcccc cgagctgcgc cttgtgcgtt ttcgcaccct cggctgctat ccgctgacgg
      721 cggctgtcga aagcagcgcc gttaccctta cggagatcgt cgccgaaact ctcggcgcga
      781 ccacatcgga gcgccaaggg cgggtgatag atcacgacgg cgccggctcc atggagcgaa
      841 aaaaacagga agggtatttt taatggatat cctacgcttc attacctgcg gcagcgtcga
      901 cgacggcaaa tcgacgttga tcggccgctt gctgtatgaa accaagctaa tcttcgaaga
      961 tcagctcgaa gcgctcatgg ccgattcgaa gaaatttggc acccagggcg aacgcctcga
     1021 tcttgcgctg ctcgtcgacg gcttgcaggc cgaacgtgag caaggcatca ccatcgatgt
     1081 tgcctatcgt tttttctcga cctccaagcg gcggtttatc gtcgctgata cccctggcca
     1141 cgagcaatat acccgtaaca tggccaccgg tgcttccacc gccgacgctg cggtgctgtt
     1201 gatcgacgcg cgcaaaggcg tgctcacgca gaccaaacgg cacagccgaa tcgcggcgat
     1261 gtttggcgtc cgtcatatcg ccctggcggt caacaagatg gacctggtgg actggtcgca
     1321 gtccaggttt gaagaaattg atgcagccta ccgacagttc gcgcaggact tagagttcag
     1381 cagcatcacg gcgatcccgc tgtcagcgct tgaagggcag aatattcttg aaccagcccc
     1441 agcgacgatg ccttggtatc atggccagag tttgctgcac tggctggaaa cggtgcccag
     1501 cgccgaacgc gagttgacca agcccttcac catgccggtg cagtgggtca atcggcccaa
     1561 cctggatttt cgcggctttt ctggacgcat tggcagcggt tcacttagac cgggcgatcg
     1621 cgtgcgtgtc agtccatcag gggttgtcag cggcgtcaag gaaatctcgg tttggggtgg
     1681 ccccctgcca gagg
//
LOCUS       DATIRS010000005         2030 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1376855, whole genome shotgun sequence.
ACCESSION   DATIRS010000005 DATIRS010000000
VERSION     DATIRS010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1376855"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..382
                     /locus_tag="VLM90_00065"
     CDS             <1..382
                     /locus_tag="VLM90_00065"
                     /inference="COORDINATES: protein motif:HMM:NF021378.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SHOCT domain-containing protein"
                     /protein_id="HSQ11374.1"
                     /translation="TFYAIIVNVGFAFDRHSAAEVDMNASELAGFLRLDDFILSLLAV
                     QAPYEWGWRMHPMWSSGWGIGMMIMMALFWGAIIVAVILGLRWLVGQRKNSPVDSAMT
                     ILRERFARGEIEKDEFETKKRALT"
     gene            420..674
                     /locus_tag="VLM90_00070"
     CDS             420..674
                     /locus_tag="VLM90_00070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11375.1"
                     /translation="MEDADLKHHFHLMQTEIEATASLLKDAKIDLTSAIDSIKIELEI
                     LKTYMARNHPEFAKTYAALREEAIQAIDPEWPGAEPTRKQ"
     gene            688..1128
                     /locus_tag="VLM90_00075"
     CDS             688..1128
                     /locus_tag="VLM90_00075"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSQ11376.1"
                     /translation="MAKSIKRLTVGDCMSVDPVTVAPNDSLQRVVELLRRRDIRAVPV
                     VEDGKLIGIVSDRDVRQVAPAYPLFRDEDEIRRYTENLTVTAAMTADPMTVAVDTPLV
                     DAAKVLETYRISSLPVLDRHRLVGILSVTDLLRVFVEQNTEIAA"
     gene            1125..1661
                     /locus_tag="VLM90_00080"
     CDS             1125..1661
                     /locus_tag="VLM90_00080"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSQ11377.1"
                     /translation="MKLQELMVKDVIQAAPDETVGVAGKRMRESAVGCLVVTVAGAVK
                     GIVTDRDLLACLAATHDPYRCQIATHMRRPVHVLRPDEDHTIAAQVMRERRIKRLPIA
                     HNGKLLGIVSLSDLAAIAGWEAEGLRTALRFFTAVVRTQASQSEPGREAKLTSRVVSP
                     PAEYADDDREGLDTGGPG"
     gene            1668..>2030
                     /locus_tag="VLM90_00085"
     CDS             1668..>2030
                     /locus_tag="VLM90_00085"
                     /inference="COORDINATES: protein motif:HMM:NF036998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11378.1"
                     /translation="MIAEANAPSSALLTDLYQLTMLQGYFDRRMEETAVFEFFVRKLP
                     AQRNFLIAAGLEQALGFLENLRFTAEELNWLSNHGAFRPAFVNYLDRLRFTGDVHAMA
                     EGTLFFANEPILRVTAPIM"
BASE COUNT          417 a          559 c          640 g          414 t
ORIGIN      
        1 cacattctat gcgattatcg tcaatgtcgg attcgctttt gaccgacata gcgccgcgga
       61 ggtggatatg aatgccagcg aattggcggg gttcctgcgt ctcgatgatt tcattctgtc
      121 gctacttgcg gtgcaagcgc cttacgaatg gggctggcgc atgcatccga tgtggagctc
      181 gggttggggc atcggcatga tgatcatgat ggcgttgttc tggggtgcga tcatcgtcgc
      241 ggttattctt ggcctgcgat ggctcgtcgg ccaacgcaaa aattcgccgg tggactcggc
      301 gatgactatc ctcagagaac ggtttgccag gggcgagatc gagaaggacg agtttgaaac
      361 taagaaacga gcactaacgt aagcgcgcgc cggtgcgcaa accaacagga ggtattcaaa
      421 tggaagatgc ggatctcaaa caccattttc atctaatgca aacggaaatc gaggcgacgg
      481 catcgttgtt gaaggatgcc aaaatcgatc tcacgtcggc catcgactcg atcaaaatcg
      541 agttggagat cttgaagact tacatggcgc gtaatcatcc ggagtttgcc aagacttatg
      601 cggccctccg ggaagaagcg atccaggcga tcgatcccga atggccgggc gcggaaccga
      661 cgcggaaaca atgaagcggg gtgacctatg gcgaagtcga taaagaggtt gacggtcggc
      721 gactgcatgt ccgtcgaccc ggtgaccgtg gcaccgaacg attccttgca gcgggtggtg
      781 gagttgttgc gccggcgcga cattcgcgcg gtgccggtgg tggaggacgg caaactcatc
      841 ggcatagtct ccgaccgcga tgtgcgccag gtggcgccgg cgtatccgct gtttcgcgat
      901 gaagacgaga tccgccgcta caccgagaat ctcacggtca cggcggcgat gaccgccgac
      961 ccgatgacgg ttgccgtcga tacgccgttg gtggatgcgg caaaggtcct cgaaacctat
     1021 cgtatcagtt ccttgccggt gctcgatcgg cacaggctgg tcggcatact ttcggtgacc
     1081 gatttgctgc gcgtgtttgt cgagcaaaac accgagatcg ccgcatgaaa ttgcaggaat
     1141 tgatggttaa ggacgtgatt caggccgcgc ccgacgaaac cgtcggcgtg gccggcaagc
     1201 gcatgcgtga aagcgcggtg ggctgcttgg tggtcaccgt ggcgggcgcg gtgaaaggaa
     1261 tcgtcaccga ccgcgatttg ctcgcctgcc tcgccgccac gcacgatccc tatcgctgcc
     1321 agatcgccac gcatatgcgc cggccagtgc atgtgctgcg tccggacgag gatcatacca
     1381 tcgccgcgca ggtgatgcgt gagcggcgca tcaagcgctt gccgatcgcg cacaacggca
     1441 agcttttggg cattgtctcg ctatcggatc tcgcagcgat tgccggctgg gaggcggaag
     1501 gacttcggac tgcgctcaga tttttcaccg ccgtcgtgcg cacccaggcg tcgcagagcg
     1561 agccgggcag agaagcaaag ttgacgagcc gcgtggtatc gccgccggcg gaatatgccg
     1621 acgatgaccg ggaaggtctt gataccggcg gacctggata gtggccgatg attgccgaag
     1681 cgaacgcgcc gtcaagcgcg ctgttaaccg atctctacca gctcaccatg ctccaaggtt
     1741 atttcgatcg gcgcatggaa gagacggcgg tctttgaatt tttcgtgcgc aagctaccgg
     1801 cacagcgcaa ttttctgatc gccgcggggc tagagcaagc gctcgggttt cttgagaacc
     1861 tgcgcttcac tgcagaagaa cttaactggc tgtcgaacca cggcgctttt cgtcccgcct
     1921 tcgtcaacta cttggaccga ctgcgcttca ctggcgacgt ccacgccatg gccgaaggca
     1981 cgttgttttt cgccaacgaa ccgatcctgc gcgtgactgc gccgatcatg
//
LOCUS       DATIRS010000006         1923 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1770168, whole genome shotgun sequence.
ACCESSION   DATIRS010000006 DATIRS010000000
VERSION     DATIRS010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1923
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1770168"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..589)
                     /locus_tag="VLM90_00090"
     CDS             complement(<1..589)
                     /locus_tag="VLM90_00090"
                     /inference="COORDINATES: protein motif:HMM:NF021141.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2459 domain-containing protein"
                     /protein_id="HSQ11379.1"
                     /translation="MLWWRQLLPLGLAAILLCLADRLAYPEAASQWACTDSEPTCKSV
                     SIVHNSWHAAIVLRKSDFAEKTMPELADFPAAQFIEFSWGDKDYFPDPQSGVLGAIKA
                     ALWSSGSVIHLVGFTDTVEHFYRGANIAELRLNRTAYQRMVSYIDETFRREQPAGRVR
                     AAPGLFSYSRFYSASRSFSLLRTCNTWVAAALEHAG"
     gene            complement(662..>1923)
                     /locus_tag="VLM90_00095"
     CDS             complement(662..>1923)
                     /locus_tag="VLM90_00095"
                     /inference="COORDINATES: protein motif:HMM:NF012885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11380.1"
                     /translation="KLIRKTPLRSIRSRSMLAFQLTAPAITDLWLERLAANGIHELRT
                     SDPSNTPKYWRQAVDGAKRVGLKTILNIIYSISPKHTDEYFIQRCREAAKLDVERICF
                     KDPGGLLTPETTRRLVPLIQRAATGKPVEFHTHCNTGLGALCCIEAIQLGITSINTAI
                     PPLAEGSSNPSLFNVAMNSRALGYQTMVDEEMVKHVRDHFMRVAKQENLPIGRPLAYD
                     ALHPLHQVPGGMISNFRFQLANLAKLDQLPAVLEEVTRVRAEFGYPIMVTPYSQFFGV
                     QAAINVMVGARYQEVTDEVLLYALGYWGEEEAESINANLRDRLVNSARAKELAKVKVP
                     DIGLAEFRMKFGGDGVSDDDKLLNFFAGAEALAALKAAGEPRDYARTATPLVALIEQL
                     SRRQDPKQVYIKREGFSLRMARRRPAD"
BASE COUNT          388 a          552 c          584 g          399 t
ORIGIN      
        1 cgcctgcatg ttccagcgct gcggcaaccc aggtgttaca ggtgcgcagc agactaaaac
       61 tgcggcttgc cgaataaaag cggctgtagg aaaacaaccc cggagcggcg cgcacgcggc
      121 cagctggctg ttcgcgtcgg aaagtttcgt cgatgtaaga gaccatgcgt tggtaggcgg
      181 tccggtttaa gcgcagttcc gcgatattgg cgccgcggta gaaatgttcg accgtgtccg
      241 tgaatccgac aaggtgaatc acgctgccac tggaccacaa cgccgccttg atggcgccca
      301 agactcctga ttgcggatcg ggaaaatagt ctttgtcgcc ccagctgaat tcaataaact
      361 gggccgcggg aaaatccgcc agctcgggca tggttttttc tgcgaagtcg cttttgcgca
      421 ggacgatggc ggcgtgccag gagttgtgaa cgatggatac ggatttacaa gtcggttcgc
      481 tatccgtgca agcccactga gaggcggctt cggggtaagc gagccgatct gcaaggcaaa
      541 gcagtattgc cgccaagccc aacggtaaca gttgtcgcca ccagagcatg gccacagcta
      601 gcctcggatg gtccgctcaa tcaacctcaa gagtgcggct gccagtgcgt catgccgtgc
      661 ctcaatcagc cggccgccgt cgtgccattc gcaaactaaa tccctcacgt ttgatataga
      721 cttgctttgg gtcctggcgc cggctcaact gctcgatcag agcgacgagc ggcgtcgccg
      781 tgcgggcgta atctcttggc tcgccggctg cttttagagc cgccaaggct tccgcgccgg
      841 caaaaaagtt gagtagcttg tcgtcgtcgc tgacgccgtc gccgccaaat ttcattctga
      901 attctgccaa gccgatgtcg gggactttga ccttggccaa ttctttggcg cgcgcgctgt
      961 tcactaagcg atccctgaga ttggcgttga tggactccgc ttcctcttcg ccccagtagc
     1021 ccaaggcgta cagcagcacc tcatcggtga cttcctggta gcgcgcgccg accatgacgt
     1081 tgatggcggc ttggacgccg aagaactgcg agtagggcgt caccatgatc ggatagccga
     1141 actcggcacg gacgcgggtg acttcttcga gcaccgccgg cagctggtca agcttggcca
     1201 aattagccag ctgaaaacga aagttggaaa tcatgccgcc gggcacctgg tgcaaaggat
     1261 gcaacgcgtc gtatgccaac ggccgcccta tcggcaaatt ctcctgcttg gccaccctca
     1321 tgaaatggtc gcgcacgtgt ttgaccatct cctcgtcgac catggtctga tagccaagcg
     1381 cgcggctatt catggcgacg ttgaaaagcg atggattcga cgaaccttcg gcgagcggcg
     1441 ggatcgccgt attgatcgac gtgatgccga gctggatcgc ttcgatacaa caaagcgcgc
     1501 ccaggccggt gttgcagtgg gtgtgaaact caacaggttt gccagtcgct gcgcgctgga
     1561 tcaacggcac cagacggcgc gtcgtttccg gggtcaacag cccgccggga tctttgaagc
     1621 atatccgttc gacgtcgagc ttggccgctt cgcggcagcg ctggataaaa tattcgtcgg
     1681 tatgcttggg cgagatcgaa taaataatgt tcaagatcgt cttcaggccg acgcgtttgg
     1741 cgccgtcgac cgcttggcgc cagtatttcg gcgtgttcga cggatcggag gtgcgcagtt
     1801 cgtggatgcc gttggcggcc aaccgttcga gccacagatc ggtgatcgcc ggcgcggtca
     1861 actgaaacgc cagcatcgag cggctgcgaa tcgagcgcaa cggggttttc ctgatcagct
     1921 tcg
//
LOCUS       DATIRS010000007         2103 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_983649, whole genome shotgun sequence.
ACCESSION   DATIRS010000007 DATIRS010000000
VERSION     DATIRS010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2103
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_983649"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            136..1185
                     /locus_tag="VLM90_00100"
     CDS             136..1185
                     /locus_tag="VLM90_00100"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ11381.1"
                     /translation="MKPIAGAVLIALSIAGSAWAQGKMSTEQLAAYNKPDREKMLYAG
                     AKAEGKVTWYTSLAGESYKKLAAAYEARYPGVSVESYRATRQEMSARILAESQSQRYI
                     ADTMETTIPLLKLLKDNNWLVPYYFSTMAKYPDHVKEKAPKGLVFWAIDRESHIGLAY
                     NKNLIPAKSVPRNYEGLLRPELKDKISFAGSDTGVTVIGALLKFKGEEFVRKLKTLNP
                     SVHNVSGRALLDMVISGEVGVSPTTFRNHVEVSLKAGAPIEWIPMDVVPANSGSTAVL
                     AKAPHPHAALLLADFILGPGGQKVLEEYEYGNPSKEYGFKRWYPEQGMTAEQIDTLEG
                     KWRTIMRDMTKRSSF"
     gene            1409..>2103
                     /locus_tag="VLM90_00105"
     CDS             1409..>2103
                     /locus_tag="VLM90_00105"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSQ11382.1"
                     /translation="MNTGSYVDGKWFHPKSNRLVRNLNPADPDEVIAEFPAATAEDVT
                     RAIDAAQAAFRSWRKTPGPERGRVLWRAADIARQRADEIARTLTREEGKILKEAKGEV
                     MKGISLLEYYAGEGFRMHGMTLPSEARDTFTYTIRRPLGVVGLIAPWNFPWAIPVWKS
                     APALAAGNCVIFKPAELTPATASLLTEIYAEAGLPAGVFNMLVGSGSVVGEAMVHSPV
                     LRAISFTGSNEVGG"
BASE COUNT          484 a          641 c          566 g          412 t
ORIGIN      
        1 actctggagc agatcgagaa agaattcaaa gtaccccagg aattctccca ctacacccgg
       61 cccgagcggc tacgctcgtt ctacaaactt ttctaccatc aactcatgga aaccggttat
      121 taaaggagat cgccaatgaa acctatcgcc ggagcagttc tcatcgccct atccatcgca
      181 ggttcggcat gggcgcaggg caaaatgtcc accgaacaac tggccgccta caacaagccc
      241 gaccgcgaaa agatgctcta cgccggcgcc aaagcggaag gcaaggtcac ctggtatacc
      301 tcgctggcag gcgaatcata taaaaagctc gccgccgcgt atgaggcgag atatcccggc
      361 gtttctgtcg agtcctaccg cgccacgcgc caggaaatga gcgcgcgcat cttggccgag
      421 tcgcagtcgc agcgctacat cgccgacacc atggagacga cgatcccgct gttgaagcta
      481 ttgaaagata acaattggct ggtgccgtat tatttttcga cgatggcgaa gtatcccgat
      541 cacgtcaaag agaaagctcc caaaggtttg gtcttctggg ccatcgaccg tgagtcccat
      601 atcggtctcg cctacaacaa gaatttaatt ccggcgaaat cggtgccgcg caactatgaa
      661 ggcctcttgc ggccggagct gaaagacaaa atctccttcg cgggcagcga cacgggtgtc
      721 accgtcatcg gcgccttgct caaattcaaa ggcgaagagt ttgtccgcaa actgaaaacc
      781 ttgaatccat cggtgcataa cgtttccggc cgcgccctgc ttgacatggt gatctccggc
      841 gaagtcggcg tttcgcccac caccttccgt aaccatgtcg aagtgtcgct caaagccggt
      901 gcccccatcg aatggattcc catggacgtg gtgccagcca actccggctc caccgcggtg
      961 ttagccaaag cgccccatcc ccacgccgcg ttgctcttgg ccgacttcat ccttggcccg
     1021 ggcggacaga aagtactcga agaatacgag tacggcaacc caagcaagga gtacggcttc
     1081 aaacgctggt accccgagca gggcatgacc gccgaacaaa tcgacaccct cgaaggcaaa
     1141 tggcgcacga ttatgcgcga tatgactaag cggtcgtcgt tctaaacatt tcaggaccac
     1201 acaaaaaacc cgcatagacc gtaacccgac cccatccgtc attgccgcac aggccggaag
     1261 gtatccaggt tcaattccca acggtgaaaa aaacctggat tgccgttttc acggcaatga
     1321 cggatattgc tcctgcaaga gctatggtct ttgcctaacc tgctggagat atttttaagc
     1381 cagaattttc tttcacagcg aggtcatcat gaacaccggt tcatatgtcg acggcaaatg
     1441 gtttcatccg aagtccaatc gtctagtgcg taatctcaac ccggccgatc ccgatgaagt
     1501 gatcgccgag tttcccgccg ccacggccga ggatgttacc cgcgcgatcg acgcggcgca
     1561 ggcggcgttt cgaagttggc gaaagacccc cggcccggag cgcggccgcg tgctctggcg
     1621 cgcggcggat atcgcgcgcc agcgcgccga cgagatcgcc cgaacgctca cccgcgaaga
     1681 aggtaaaatt ctcaaagaag ccaagggcga agtgatgaaa ggcatctcgc tattggaata
     1741 ctacgctggc gaaggatttc gcatgcacgg catgaccttg ccgtccgaag cgcgcgacac
     1801 gtttacttac acgattcgcc gcccgctcgg cgtcgtcggc ctgatcgcgc cgtggaattt
     1861 tccctgggcg atcccggttt ggaaatccgc cccggcgttg gccgcgggta attgtgtgat
     1921 tttcaaaccc gctgaactga cgccggccac agcgtctctg cttaccgaga tttacgccga
     1981 agccggcctg cctgccggcg tgttcaacat gctcgtcggc tccggctcag tggtcggcga
     2041 agcgatggtg cactcgccgg tgctgcgcgc gatctccttc acgggttcga atgaagtcgg
     2101 cgg
//
LOCUS       DATIRS010000008         2585 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_197274, whole genome shotgun sequence.
ACCESSION   DATIRS010000008 DATIRS010000000
VERSION     DATIRS010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2585)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2585)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2585
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197274"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1040)
                     /locus_tag="VLM90_00110"
     CDS             complement(<1..1040)
                     /locus_tag="VLM90_00110"
                     /inference="COORDINATES: protein motif:HMM:TIGR02226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HSQ11383.1"
                     /translation="MEFLNPTALLGLLALPLLLIPYLIRRKPQRLAFSSLLLFIEAGE
                     SASAKPWGRIHFPPLFFLQLMLLALLIFALSEPVLSIRPTNIAIVLDNSASMQALEDG
                     KTRFSLAQERANALAGELGAGGKVDLYLTTPTLEKVHAVPLSPSEVTAIVGKLAPYDL
                     GDAPIDYDKVLAQLARQYKYQRVYLLSDRPGRGQSAVARVITVGQPRGNFALTAFDVQ
                     RSSLVNARLEASVEVTNYSERDEKIKILLKGKGAELAHREIVVGTGKSAAVSFEGIAD
                     HPSYEAEIANRDALPVDNRRFAVAPASRNLRILGITPRPRELESLKAIPGVQIDIVAP
                     ADYDKVERAGYG"
     gene            complement(1045..1938)
                     /locus_tag="VLM90_00115"
     CDS             complement(1045..1938)
                     /locus_tag="VLM90_00115"
                     /inference="COORDINATES: protein motif:HMM:NF013998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HSQ11384.1"
                     /translation="MLPNPFTPNFLSQLEALRLRTRKEFLGSHPGSYSSPRRGTSLEF
                     ADYRRYTPGDDLRYLDWGIYARTDRLYVKLFREEVDLYAYVFIDASASMGYPSRELKF
                     LPATHVALALSYVVLANHDHVKLHLLQENNRANTTPFYGDRRRMTDCVNFATSAIPGG
                     ALQLAPALADHLKKMRRPGKAILVSDFLMPASSYQPGLNLLRAFNLDIAVIQILSRHE
                     VDPRFPNGSLALVDSETEQEIKYQWNVNARQDYQAKLAHHNAELRSFCHQSRIHYSLY
                     VTDRDLSDFVFATLPAIGLFK"
     gene            complement(1953..>2585)
                     /gene="queC"
                     /locus_tag="VLM90_00120"
     CDS             complement(1953..>2585)
                     /gene="queC"
                     /locus_tag="VLM90_00120"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: protein motif:HMM:NF018242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HSQ11385.1"
                     /translation="ALAQQAGFAIHALSFRYGQRHTCEIDAARRVADFFKASSHLVID
                     FDLRAIGGSALTDQIDVPKSRSTTEISQGIPVTYVPARNTIFLSFGLALAERIDAHDI
                     FFGANQLDYSGYPDCREEYIRAFEAMANLATKAGVEGESRLKIHAPLLHMTKAAIISK
                     GSELGVDFGLTWSCYDPSQDGRACGLCDSCQLRVKGFSQAGVIDPIAYVE"
BASE COUNT          526 a          705 c          824 g          530 t
ORIGIN      
        1 aagccgtagc cggcgcgctc gactttgtca tagtcggcgg gcgcgacgat atcgatctgc
       61 acgccgggga tcgcttttaa gctttccaac tcgcgtggcc gcggggtaat tcccagtatg
      121 cgcaggttgc gcgatgctgg cgccacggcg aaacgccggt tgtcgacggg taaagcgtcg
      181 cggttggcga tctcggcttc gtagctggga tggtcggcaa taccctcgaa ggaaactgcc
      241 gcactcttgc ctgtgccgac gacgatctcg cggtgcgcca attccgcgcc cttgcctttt
      301 agaagtattt tgattttttc atcgcgctcg gaataattgg tgacttcgac cgacgcttcc
      361 aagcgggcgt tgaccagcga cgagcgctgc acgtcgaaag ccgtcagcgc gaagttgccg
      421 cgcggttggc cgacggtgat cactcgcgcg accgcgcttt gcccgcgccc cgggcgatcg
      481 ctaagcagat atacccgctg gtatttgtac tggcgcgcca gttgcgccag caccttgtcg
      541 taatcgatcg gcgcatcgcc caagtcgtag ggcgctagct tgccgacgat cgcggtgact
      601 tcgctgggcg aaagcggtac ggcgtgaact ttctccagtg tcggtgtggt caaataaaga
      661 tcgactttgc cgccggcgcc gagttcgccg gccagcgcgt tggcccgctc ttgcgccagt
      721 gaaaagcgcg tcttgccgtc ttccagcgcc tgcatgctcg cggaattgtc cagaacgatg
      781 gcgatgttgg tgggccgaat cgacaacacc ggttcgctca aggcgaaaat taacagcgcc
      841 aagagcatta gttgcaggaa aaatagcggc gggaagtgga ttcgccccca aggtttggcg
      901 ctggccgatt cgccggcttc gataaacagc agcaagctcg aaaacgccag gcgctggggt
      961 ttgcgccgga tcaaatacgg aatcagcagc agcggtagcg ccaggaggcc gagcagggcg
     1021 gtgggattga gaaattccat tggcttattt aaacaggccg atggccggca atgtggcgaa
     1081 gacgaagtcg cttagatcgc gatcggtgac atacagcgaa tagtggatac ggctttgatg
     1141 gcaaaagctg cgcagctcgg cattgtgatg ggccagctta gcctgataat cctggcgcgc
     1201 gttaacgttc cattgatatt tgatttcctg ctcggtctcg ctgtcgacca aggccaaact
     1261 gccgttggga aagcgcggat cgacctcgtg gcgcgacagg atttgaatga ccgcgatgtc
     1321 gagattgaag gcgcgcagta gattcaagcc gggctgatag gacgacgccg gcatcaaaaa
     1381 atcagagacc aaaatcgctt tgcccggccg gcgcattttc ttcaaatgat cggccaacgc
     1441 tggtgccaat tgtagggcgc cgcctgggat tgccgaggtg gcgaagttga cgcagtcggt
     1501 catgcgtcgc cggtcgccat agaatggcgt agtgttggcg cggttgttct cttgcagcaa
     1561 gtgcagcttc acatggtcgt gattggcgag aacgacatag ctcagcgcca gagcgacatg
     1621 agtcgccggc agaaacttca gctcccgcga cgggtaaccc atggacgcgc tggcgtcgat
     1681 gaagacataa gcgtacaggt cgacttcttc gcgaaaaagt ttcacgtaga gccggtcggt
     1741 gcgcgcgtag atgccccagt cgagataacg caagtcgtcg cctggtgtgt aacggcggta
     1801 gtcggcgaac tccaaactgg tgccgcgccg cggcgacgaa tagctgcccg gatggctacc
     1861 gagaaattcc ttgcgcgtgc gcaggcgcag agcttccagc tgactgagaa agttcggtgt
     1921 gaaggggttg ggcagcatgt tttctatcta gtttactcga cgtaggcgat ggggtcgatc
     1981 acgccggcct ggctaaatcc tttgacgcgc aactggcagc tatcgcatag gccgcaggcg
     2041 cggccatctt ggctggggtc gtagcaactc caggtcagac caaagtcgac gccgagctcg
     2101 cttcctttgg atatgatagc ggcttttgtc atgtgcaaca gcggcgcgtg gattttcaac
     2161 cggctttcac cctcgacgcc agccttggtg gcgagattgg ccatggcttc aaaggcgcgg
     2221 atatattctt cgcggcagtc gggatagccg ctgtagtcaa gctgattggc gccaaagaaa
     2281 atgtcgtggg cgtcgatgcg ttccgccaaa gcgagaccaa aggacagaaa aatcgtgttg
     2341 cgcgccggca cgtaggtcac cgggatgccc tgggagatct ccgtcgtgct gcggcttttg
     2401 ggcacgtcga tttgatcggt gagcgccgag ccgccgatgg cacgcaggtc gaaatcgatg
     2461 accaagtggc tactcgcttt aaaaaaatcc gccacgcgcc gcgccgcgtc gatctcgcaa
     2521 gtgtgacgct ggccgtagcg gaaactgagc gcatgaatcg caaagccggc ttgttgggcg
     2581 agcgc
//
LOCUS       DATIRS010000009         3250 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_394264, whole genome shotgun sequence.
ACCESSION   DATIRS010000009 DATIRS010000000
VERSION     DATIRS010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3250
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_394264"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            83..1552
                     /gene="tcuA"
                     /locus_tag="VLM90_00125"
     CDS             83..1552
                     /gene="tcuA"
                     /locus_tag="VLM90_00125"
                     /inference="COORDINATES: protein motif:HMM:NF006130.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent tricarballylate dehydrogenase
                     TcuA"
                     /protein_id="HSQ11386.1"
                     /translation="MRTESIAVVVVGGGSAAFEAAVAAKQAGAPQVVMLEKAPEPEFG
                     GNARYSHTGFRWVFSGPEEIRKFLPDMDDELFAKLHIPAYTAEQFNADLQRVTKGRIS
                     KELSEVLVTQSTAAIHWMREVGIKWDIDSYVIIDGKYYFEPGMVIHPRGGVEGGLDQL
                     MQWREIATKMGIELRYESRVAALLGNDRRIEGVRVSDPNEEYEIRANSVILCAGGFQA
                     SAEKRARYLGPNADLMKVRGSKHDTGEVLMMAIDMGAKTAGHWQGAHATPIDATFPDV
                     EISNKANRYGYTYGITVNSLGQRFFDEGEARHSYTYAKTGWAVLGQPGAIAYQIYDQK
                     ALGLLNKRYYEFSHPIEANTIEELAQKISIEPMILKRTIDEFNGAIRKDIPFDATKLD
                     GRCTEGITPKKSHWADTLDKPPYFAYAITGGVTFTFGGLQINTQAQVLNTSNNPIRGL
                     FASGDIVGLFFHNYPSCTGQTRNVVFSRLAGRNAAAQGL"
     gene            1714..2727
                     /locus_tag="VLM90_00130"
     CDS             1714..2727
                     /locus_tag="VLM90_00130"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ11387.1"
                     /translation="MFWAALLMICPGDVHSAEQFYEGKTIQLLVASGPGATTDFGARL
                     VGRYLGKHMPGNPGVVVRNMSGAGGLIAANYLYNVAKPDGLTILAVSRANYMEQIIGR
                     PEAKADFRKFNWIGSFNKAPMMAACRSDTEYKSIAAIRAAKTPPRFGQSGTGSISYIF
                     ANLMERLLDIKLKNVTGFQGGRDTDLGLERGEIDCRATSDVTVIRAPWNRWIKENYVT
                     FIIQQGPEKSALLPPVPTVAELARPEAKPYLNLMNVMLAYTEFDRPFAAPPGVSRERV
                     QILRDSFERMLKDSEFVAEAKKLLDWDGTTYLSGDQLQKKIIATVTQPADVVKRVKEI
                     MAE"
     gene            complement(2968..>3250)
                     /locus_tag="VLM90_00135"
     CDS             complement(2968..>3250)
                     /locus_tag="VLM90_00135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11388.1"
                     /translation="FLDARTNGGKKGHPSDPAYWENMFPVCEFSKQKLTSIKIYPIDQ
                     GFGRPRPQRGRPMLAEGEVANRVIERVVRLSKHYGTKVMNQGGVGVIEP"
BASE COUNT          708 a          916 c          966 g          660 t
ORIGIN      
        1 gattgatggg tatcgctgcg ctccacccat cctacacagg caaatacatt aaacagtttg
       61 tccggataga tggaggaaac tcgtgagaac tgaaagcatt gccgttgtag ttgtcggcgg
      121 cggcagcgcc gcctttgaag cggcggtggc ggccaagcaa gccggcgcgc cgcaagtcgt
      181 gatgctggag aaagcgccgg agccggagtt tggcggcaac gcgcgatatt cgcacaccgg
      241 ttttcgctgg gtgttttccg gccccgaaga gattcgcaag ttcctgccgg acatggacga
      301 cgagctcttc gccaagctgc atatcccagc ctataccgcg gagcagttta acgccgacct
      361 gcagcgggtg accaagggac ggatcagcaa agaactgtcc gaggtgttgg tgacacagtc
      421 caccgcggcg atccattgga tgcgcgaagt cggcatcaaa tgggacatcg acagctatgt
      481 gatcatcgac gggaaatatt acttcgaacc ggggatggtg atccatccgc gcggcggcgt
      541 tgagggcgga ctggatcaac tcatgcagtg gcgcgagatc gccaccaaga tgggtatcga
      601 gctgcgctac gagtcgcggg ttgcggcgct gctcggcaac gaccggcgaa tcgagggtgt
      661 gcgcgtctcc gatcctaacg aagagtatga aattcgcgcc aactcggtga ttctgtgcgc
      721 cggcggattt caggcgagcg cggagaagcg ggcacgctat ctcggcccca acgccgacct
      781 gatgaaggtg cgcggcagca agcatgatac cggcgaagtg ctgatgatgg cgatcgacat
      841 gggcgccaaa accgcgggcc attggcaggg cgcccatgcg acgccgatcg acgcgacctt
      901 tcccgatgtc gaaatcagca acaaggccaa tcgctacggc tacacctacg gcatcaccgt
      961 caattctctc ggccagcgct ttttcgacga gggcgaagcg cgccattcct acacctacgc
     1021 caagaccggt tgggcggtgc tcgggcagcc gggcgccatc gcctaccaaa tctacgatca
     1081 gaaggcgttg gggcttttga acaagcgcta ttacgaattc tcccatccca tcgaagcgaa
     1141 cacgatcgaa gagttggcgc agaagatcag cattgagccg atgattctca agcggaccat
     1201 cgacgagttc aacggcgcga tccgcaaaga catcccgttc gacgcgacca aactggacgg
     1261 ccgctgcacc gagggcatca cgccgaaaaa atcccactgg gccgataccc tcgacaagcc
     1321 gccctacttc gcctacgcga ttaccggcgg cgtgaccttc acttttggtg gcttgcagat
     1381 caacacccag gcccaggtgc tcaacacctc gaacaatccg atccgcgggc tattcgcttc
     1441 cggcgacatc gtcggtttgt tttttcacaa ctatccgtcc tgcaccggtc agacgcgcaa
     1501 tgtggttttc tcgcggctgg ctggaagaaa tgccgcggcc caggggctgt gacgccgcgg
     1561 gacgcggcgt atttcagatt tcaattgccg attgaatgcg tgaggagttt gattctgtga
     1621 ttgcctatgc ggacagactt acgcgtggtt gagcggacga tgggtatcgc ttcgttctcc
     1681 ccgtcctaca gaaagaattt accgctgaga ttgatgtttt gggctgctct gctgatgatc
     1741 tgccccggtg acgttcattc agcggaacaa ttctatgagg gcaagacgat tcaattgctg
     1801 gtggcgagcg gccccggcgc gaccaccgac ttcggtgccc gtttggtggg ccgttatctg
     1861 ggaaaacata tgccgggaaa tcccggcgtc gtcgtgcgca acatgtcggg cgccggcggg
     1921 ttgatcgcgg ctaactatct ctacaatgtc gccaagccgg atggattgac gatattggcg
     1981 gtgagccggg ccaactacat ggagcaaatc atcggccggc ccgaggctaa ggcggacttt
     2041 cgcaaattca attggatcgg cagcttcaac aaagcgccga tgatggcggc ttgccgttcg
     2101 gatacggaat ataaaagcat tgcggcgatc cgcgcggcca aaaccccacc gcgcttcggc
     2161 caatcgggca ccggcagcat cagttatata ttcgccaact tgatggagcg actgctcgac
     2221 atcaagttga aaaatgtcac cggatttcag ggcggccgcg acaccgatct cggcttggag
     2281 cggggcgaga tagattgccg ggcgacttcc gatgtcacgg tgattcgcgc gccgtggaat
     2341 cgttggataa aagaaaacta tgtcactttt attattcagc aagggccgga gaaaagcgcg
     2401 ctattgccgc cggtacccac ggtggcggaa ctcgcgcgcc ccgaggctaa gccttattta
     2461 aacctaatga atgtcatgct cgcttacacc gagttcgacc ggcccttcgc ggcgccgccg
     2521 ggagtatcca gagaacgcgt gcagattctt cgcgacagct tcgagcgcat gttgaaggat
     2581 agcgagtttg tcgccgaggc gaaaaagctg ctcgactggg acggcacgac atacctgagc
     2641 ggcgaccaac tgcaaaaaaa aatcatcgca accgtcactc aacccgcgga tgtcgtcaaa
     2701 cgagtgaagg aaatcatggc ggaataggaa acttcaccgc tgcggctggt tggaatccct
     2761 cgcgcgaagg gtatttgaag acttgtcatg ccggcgcagg ccggcatcca tcttcgcttg
     2821 tgctgcaagt caaagaaagc ctggattccg gcctgcaccg gaatgacgga attaagaatt
     2881 ctgctgctag tcgacgtatg caaacttcct cggttttatc ccacaggcat tcagtttgcg
     2941 gaatcgccgt gatgcccgcg gtcaacgcta cggttcgatc accccaacac cgccttgatt
     3001 catcaccttc gtcccataat gtttcgagag gcgcaccact cgctcgatca cccgattggc
     3061 cacttcgcct tcggcgagca tggggcggcc gcgttgcggc cttggccggc caaagccttg
     3121 gtcgatgggg tagattttta tgctggttaa tttctgcttg ctgaactcgc agaccgggaa
     3181 catgttttcc caataggcag gatcgctggg atggcctttt ttgccgccgt tggtgcgggc
     3241 gtcgaggaag
//
LOCUS       DATIRS010000010         2294 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1279180, whole genome shotgun sequence.
ACCESSION   DATIRS010000010 DATIRS010000000
VERSION     DATIRS010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2294
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1279180"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1318)
                     /locus_tag="VLM90_00140"
     CDS             complement(<1..1318)
                     /locus_tag="VLM90_00140"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSQ11389.1"
                     /translation="MTAEFAQFNLNGSLLKALTELGYTTPTAIQSGMIPLMLTGVDVI
                     GQAQTGTGKTAAFALPILNNYQPRKSPQALVLAPTRELALQVAEAMQGYGRHLGVKVL
                     AVYGGQGYGQQVMQLRRGVDIVVGTPGRLLDLLDRKLLDFSAIQTVVLDEADEMLKMG
                     FIDDVEAILAKTPPARQTALFSATMPAPIRRLADKYMRDPQSVTIQRGQVTAVAIEQR
                     YYLVRQSDKVAALTRILEHEDAKRALIFARTRIGTAELATALTRQGFPAETLNGDLTQ
                     EARERVLNRFRNNQIQILVATDVAARGLDIDDISHVFNHDLPSEVEVYVHRIGRTGRA
                     SKTGIAISLIAPAEHAHLRRIEAFTRQKFLRATLPSVEDIMKRRSAQLTEQVSLWLKR
                     GRINRERTIVDELVAQGHDPLDIAAAALKLDRGDETKRTIAPVAEVE"
     gene            1654..1848
                     /gene="rpoZ"
                     /locus_tag="VLM90_00145"
     CDS             1654..1848
                     /gene="rpoZ"
                     /locus_tag="VLM90_00145"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HSQ11390.1"
                     /translation="MARITVEDCLEKIPSRFILVQLASKRARQLLKGAKPLIESDNRE
                     IVIALREIADGKVRWATPKT"
BASE COUNT          450 a          635 c          700 g          509 t
ORIGIN      
        1 cttcgacttc ggccaccggg gcgatggtgc gcttcgtctc gtcgccgcgg tcgagtttca
       61 aagcggcggc ggcgatgtcc aacgggtcgt ggccctgggc aaccagttca tccacgatgg
      121 ttcgttcacg attgatccgg ccgcgcttga gccagaggct cacttgctcg gtcagctgcg
      181 cgctgcgccg tttcatgatg tcttcgacgc tcggcagcgt ggcgcggaga aacttctgcc
      241 gggtaaacgc ttcgatgcgg cgcaaatggg cgtgctcggc cggggcgatc agcgagatgg
      301 cgatgccggt cttgctggcg cggccggtgc ggccgatgcg atggacgtag acttcgactt
      361 cgctcggcag gtcatggttg aaaacatggg agatgtcgtc gatgtcgaga ccccgcgcgg
      421 cgacgtcggt ggccaccagg atctgaattt gattgttgcg aaagcgattg agcacgcgct
      481 cgcgtgcttc ctgggtgaga tcgccgttga gagtttcggc ggggaagccc tgccgggtaa
      541 gcgcggtggc caattcggca gtgccaatgc gcgtgcgcgc aaagatcaag gcgcgtttcg
      601 catcttcgtg ttcgagaata cgcgtgagcg cggcgacttt atcggactgc cgcaccaggt
      661 aatagcgttg ttcaatggcc accgcggtga cttgaccgcg ctgaatggtc accgactgcg
      721 ggtcacgcat atacttgtcg gccagacggc ggatcggcgc cggcatggtg gcggaaaaaa
      781 gcgcggtctg ccgcgccggc ggggttttag ctaaaatggc ttcgacatcg tcgataaatc
      841 ccatcttgag catttcatcc gcttcgtcga gcacgaccgt ctgaatggcg ctgaaatcga
      901 gcaacttgcg atccagcaaa tcgagcaatc ggcccggcgt gccgacgacg atatcgacgc
      961 cgcggcgcag ttgcatgacc tgctggccat aaccctggcc gccatagacc gccagcacct
     1021 tgacgcccaa gtggcgtccg taaccttgca tggcttcggc gacttgcaag gccaactcac
     1081 gggtgggcgc gagcaccaag gcttgcgggc tcttgcgcgg ttgatagttg ttgagaatcg
     1141 gcagggcgaa ggcggcggtc ttgccggtgc cggtctgggc ttggccgatg acgtcgacgc
     1201 cggtgagcat gagcggaatc atgcccgatt gaatcgccgt tggcgtcgtg taaccgagct
     1261 cggtcaacgc ttttagcaat gacccattta gattgaattg ggcaaactct gcggtcatga
     1321 gaggctcctt cagatactta tgtgtagacg ttcattttgc tgcaacgtct ctgcagatac
     1381 cgttgtggtt caacaatcgg acccatcaca taagcacgag ccgctctgtt gcatctaaac
     1441 gtccgaccca tggggcggac acattgggcg ataccaagcc ctgacgattt gccactttcg
     1501 gaaggtgaag cacaatagca tattaaatac tcaacttcga ccagggcaga ttggtcgggg
     1561 acggcgagcg ccacaacgta aatgtcgggg aagggccttg tcgagtttgt cgtgccgcct
     1621 tgtgttgtca cccttggcgg actaaagtgc cttatggcta gaatcacagt ggaagattgt
     1681 ttagaaaaaa ttcccagtcg ctttatcctt gtacagctcg cctcgaaacg agccaggcag
     1741 cttctcaaag gcgccaaacc gctcatcgaa tcggacaacc gagagatcgt catcgccttg
     1801 cgcgagatcg ccgacggcaa agtccgctgg gcgacgccta agacctaacg cattgacgca
     1861 atagcctgcc tcgtatcttc aaaaatagtt tcggcaatca attggcgcct aagtcgttct
     1921 aacgccgtcg cattgtttcg cgtggctccg gccgcgcgcc aaactgctgc cgattcctta
     1981 tgggtgcgta agaaattcgc ccaagctgaa cgcgacggcg cgatttattc ttgcagcttc
     2041 tgcttgccgc tttcttggaa ttgcggaagt tcattaccgc ttggacgtct tgttcgagct
     2101 cccttgcaac ggtaattttg acctgaccaa agtaaggtca ccgctgcttc acgacttcga
     2161 gaggttgacg acgctgggcc gtcctgtggt aagcgttagg ggaaatgaaa ttgccgaggt
     2221 tgttaaggcg cgcgccgttg ccaaacctgc ggctgtggct gatcgctttg ttgctgttcc
     2281 ttgcgcccgg caac
//
LOCUS       DATIRS010000011         1582 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1574128, whole genome shotgun sequence.
ACCESSION   DATIRS010000011 DATIRS010000000
VERSION     DATIRS010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1582
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1574128"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..362
                     /locus_tag="VLM90_00150"
     CDS             <1..362
                     /locus_tag="VLM90_00150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11391.1"
                     /translation="GNVFIVLQVNPKPHPELAKVPNAVDFAANDNAKQILKFGGHDPA
                     AITRPYAMAPGTPKDRVQLLRKGFTETLKDPEFIADAKRSRLDTDPLTGEEIEKIVLQ
                     LFKIEPGMVSQLKEILK"
     gene            404..1420
                     /locus_tag="VLM90_00155"
     CDS             404..1420
                     /locus_tag="VLM90_00155"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ11392.1"
                     /translation="MKPRSANWLLLILLAMSFDAFAQDNFYRGKTVRIIVVATAGGGY
                     DTYARTIARHMGKHVAGNPTFIVDNMPGAGFLISANYMYKIAKPDGLTIGHFIGGLFL
                     QQLLGKPGVEFDARKFEYIGVPAQDNYMLGVHKSTGITSIEQWLSSKTMIKFGGVGAG
                     SATDDIPKVLGPAIGLPFQLVSGYKGTADVRLAFNSGEINGICNSWESFKATWSKELA
                     AGEVVIVLQNIAKPHPDQPKLPLAINFAKTEEGQKLIKALVHSVGPTARPFMLPPATP
                     KDRVQLLRKAYMDTMKDPEFLADATKARLDVNPLDGAELEKNVREVFNLDKTLIPRAK
                     EILK"
BASE COUNT          376 a          488 c          409 g          309 t
ORIGIN      
        1 ccggcaacgt cttcatcgtc ttgcaagtga acccaaaacc gcaccccgaa ttggcgaaag
       61 tccctaacgc cgtcgacttc gccgctaatg acaacgccaa gcaaatcctc aaattcggcg
      121 gccacgatcc cgccgcgatc acccgcccct acgccatggc gccggggacg ccaaaggacc
      181 gcgtgcaact gctgcgcaag gggttcaccg agacgctcaa ggatcccgag ttcatcgccg
      241 acgccaaacg ttcacgcctc gataccgatc cgctgaccgg cgaggaaatt gaaaaaatcg
      301 tgctgcagct cttcaagatc gagccaggca tggtaagcca gttaaaagag atactgaaat
      361 aaccaatcac ggtcatcgtc taataatgtt acaaggagcc tccatgaaac cacggtctgc
      421 caattggttg ctgctcattt tgctggctat gagtttcgac gcctttgccc aggataattt
      481 ttatcgcggc aagaccgtgc ggatcattgt cgtcgccacc gccggcggcg gctacgacac
      541 ctacgcccgc actatcgccc gccacatggg caaacatgtc gccggcaacc cgaccttcat
      601 cgtcgacaat atgccgggtg caggattcct catctcggcc aactacatgt acaagatcgc
      661 caagccagac ggcctgacca tcggccattt catcggcggt ttgttcttgc agcagttgct
      721 cggtaaaccc ggcgtcgaat tcgacgcgcg caaattcgaa tacatcggcg tgccggcgca
      781 ggacaactac atgctcggcg tgcacaagag caccggcatc accagcatcg aacaatggtt
      841 gtcgtcaaaa accatgatta aattcggcgg cgtcggcgcc ggctcagcca ccgacgatat
      901 tcccaaagtt ctcggtcctg ccatcggtct gccgtttcag ttggtgtcgg gttacaaagg
      961 caccgccgat gtgcggcttg cctttaatag cggcgagatc aacggcattt gcaattcttg
     1021 ggagtcgttc aaggccacct ggagtaagga gcttgccgcc ggcgaagtgg tgattgtctt
     1081 gcaaaatatc gccaagcccc atcccgatca gcctaaactg ccgctggcga ttaactttgc
     1141 caagactgaa gaaggtcaga agctgatcaa agcgttggtc catagcgtcg gcccgacggc
     1201 gcgcccgttc atgctgccgc cggcaacgcc caaggatcgc gtccagctac tgcgcaaagc
     1261 ctacatggac acaatgaaag acccggagtt tctcgccgac gcgaccaaag cgcgcttgga
     1321 tgtgaacccg ctcgacggcg ccgagttgga aaaaaacgtc cgagaagttt tcaacctgga
     1381 caagacgctg attccgcgcg ctaaagaaat cctcaaatag cgcgaagcgc gctgcggtga
     1441 tggagtattg gaatggtgga gtgacgggct ctcgaccgga ccaccactcc gatactccac
     1501 tactccatca ctccaattcg ctcaccttca gaagccgcaa tccttcggcg tcacatcgat
     1561 ggacgcgata tgctgcttgt cc
//
LOCUS       DATIRS010000012         1561 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_197715, whole genome shotgun sequence.
ACCESSION   DATIRS010000012 DATIRS010000000
VERSION     DATIRS010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1561)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1561)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1561
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197715"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..704)
                     /locus_tag="VLM90_00160"
     CDS             complement(<1..704)
                     /locus_tag="VLM90_00160"
                     /inference="COORDINATES: protein motif:HMM:NF020896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050485 - oxidoreductase activity, acting
                     on X-H and Y-H to form an X-Y bond, with a disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine/sarcosine/betaine reductase component B
                     subunit"
                     /protein_id="HSQ11393.1"
                     /translation="MKLEIAEFPVKQIRLSHRFSYENQLLEVDEGALLALVREDARIE
                     DVALAVALPEEKTRITGIRDIVEPRCKVSGGGQIFAGVLGAVEDLGAGRTHRLSGMSV
                     VAAAAYEGTIRAGTTVQRSAILDMSGPGAAVSRFSSLCHLVVSFKIVDGLAELDAHTA
                     IQLAEFKVAERLARITAELAPANVTTYALTASDSRLPNVMLIQGVITDPQHVHSGVGY
                     YGLSLRSSLATYVHPN"
     gene            complement(818..>1561)
                     /locus_tag="VLM90_00165"
     CDS             complement(818..>1561)
                     /locus_tag="VLM90_00165"
                     /inference="COORDINATES: protein motif:HMM:NF024739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ11394.1"
                     /translation="AVDVVQVDLSYGYQLMNANLVQAYQVPGANRYFDGTFDPSGNWH
                     SMYSLTTALLYNSAAVKPDQAPKSYEELLSPSWKGKMLFDPEAGYILAAMEAAWGRDK
                     AVNYLTRLSKQDLSYRRGGTLTTQVVTSGEYPIGIAINGETSAAIREKGAPLGFKVLA
                     PAIVKPEGLFIAKNAPHPHAALLFAEWVLSDEAQGFLAGTLGKGSAMKGVRSKFKEFQ
                     VKPDYVVNPKLGANLQTYIQDFRKIMGAP"
BASE COUNT          330 a          509 c          407 g          315 t
ORIGIN      
        1 tcgttgggat gaacgtaggt cgccagcgaa ctgcgcagcg acaagccgta ataaccgacg
       61 cccgagtgaa catgctgtgg atcggtgata acgccttgga tcagcatcac gttgggcagg
      121 cgggaatcgc tggcggttaa agcataagta gtaacattcg ccggtgccaa ttcggcggtg
      181 attcgcgcca agcgctcggc gactttgaac tccgccaatt gaatcgccgt gtgcgcatcg
      241 agctccgcca gaccgtcaac aatcttgaag ctgacaacga ggtgacagag cgaactaaaa
      301 cgcgacaccg ccgcgccagg ccccgacatg tcgaggatcg cactgcgctg caccgtcgta
      361 cccgcgcgaa tcgtcccttc ataagccgcc gccgcgacca cgctcatgcc ggatagccga
      421 tgagtccgcc ccgcgccgag gtcttcgacc gcgcccaaca ccccggcaaa aatctgcccg
      481 ccgccggaaa ctttgcatcg cggctcgacg atgtcgcgaa tgccggtaat gcgcgtcttc
      541 tcttccggca gcgccaccgc caacgcaaca tcctcaatcc gcgcgtcctc gcgcaccagc
      601 gcgagcagcg ccccttcatc gacctcgagc agctggttct cgtacgagaa acgatggctc
      661 aagcgaattt gctttaccgg aaattccgcg atctcaagtt tcataattac cggtgaccga
      721 ctgcagtcca aataaacgat tggaacgttt cgaacgtctg aaacgcgaag tcatttccga
      781 acgccttacc ccttacccgc ttacccctta ccgatttcta cggcgccccc ataattttgc
      841 gaaagtcctg aatataagtc tgcaagttcg cccccagctt cggattcacc acatagtccg
      901 gcttcacctg aaactctttg aacttgctgc gcacgccctt catggcgctg cccttgccca
      961 aggtcccggc taagaaaccc tgcgcttcat ccgacagcac ccattcagcg aacagcagcg
     1021 cagcatgggg gtgcggcgcg ttcttggcga tgaacaatcc ttcgggcttg acgatcgccg
     1081 gggccaggac tttgaaacca agcggcgcgc ccttctcgcg aatcgccgcc gaagtctcgc
     1141 cgttgattgc gataccgatg ggatattctc ccgaggtcac cacttgggtc gtcaaggtgc
     1201 cgccgcgccg gtagctcaag tcctgcttcg ataggcgcgt caagtagttt accgctttgt
     1261 cgcgccccca cgccgcttcc atggctgcga gaatatagcc cgcctccgga tcgaagagca
     1321 ttttgccctt ccacgacgga ctgagtaatt cttcatagct cttcggcgcc tggtccggct
     1381 tcaccgcggc gctgttgtac aacaaagccg tggttagaga gtacatgctg tgccagttgc
     1441 cgctgggatc gaaggtccca tcaaagtaac ggttcgcgcc ggggacttga tacgcctgca
     1501 ccagattggc gttcatcaac tgatagccat agctcaggtc aacttgcacc acatccaccg
     1561 c
//
LOCUS       DATIRS010000013         1713 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_99411, whole genome shotgun sequence.
ACCESSION   DATIRS010000013 DATIRS010000000
VERSION     DATIRS010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1713
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99411"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1578
                     /gene="treZ"
                     /locus_tag="VLM90_00170"
     CDS             <1..1578
                     /gene="treZ"
                     /locus_tag="VLM90_00170"
                     /inference="COORDINATES: protein motif:HMM:TIGR02402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malto-oligosyltrehalose trehalohydrolase"
                     /protein_id="HSQ11395.1"
                     /translation="PWEDASWLGLPLPRYVIYELHVGTFTSAGTFDAIVAHLAELKDF
                     GITAIELMPVGQFPGSRNWGYDGVLPYAVQDSYGGPQGLKRLVNACHKIGLAVILDVV
                     YNHLGPEGNYLADFGPYFTERYRTPWGPALNFDGPDSDPVRRYFIDNALYWVCEFHID
                     ALRLDAVHTILDHSPYTFLEQLGDEVHQAATTLNRQILLFPESAANDARLIRSREVGG
                     YGLDGQWNDDFHHALRGVLSDERSGYYEDYGKFSQLVKAFREGFVYSGEYSKHRRHRH
                     GTSTQDIAAERFVVFSQNHDQVGNRMLGERLSQLVSFESLKLAAAAVILSPYVPLLFM
                     GEEYGEEAPFQYFISHGDAGLIDAVRNGRRGEFASFGWLDEPPDPQDEKTFLRAKLNH
                     QLKGDGKYRVLWDFYRELLRLRQEVAPLAQLSKERCEVIGFDNDRVLLMRRWQGKQVV
                     VTLFNFNSAPVSLALPIAPGRWRKALDSSEARWRGAGSELPAQFDCAASVALRLPPSS
                     SALFMRVKQHPKKSFES"
BASE COUNT          340 a          497 c          503 g          373 t
ORIGIN      
        1 ccctgggaag atgcctcctg gttgggtttg ccgctgccac gctacgttat ttacgaactg
       61 cacgtcggca ctttcactag cgccggcacg ttcgatgcca tcgtggcgca tctcgccgag
      121 ctcaaagact tcggcatcac ggccatcgaa ctgatgccgg tggggcagtt tcccggaagc
      181 cgcaactggg gctacgacgg cgtgctacct tacgccgtgc aagattccta tggcgggccg
      241 caaggtctca aacgcttggt caacgcttgt cataagattg gcttggcggt gattctcgac
      301 gtcgtctaca accatcttgg gccggaggga aactatctcg ccgatttcgg cccttatttt
      361 accgaacggt atagaactcc gtggggcccg gcgctgaatt tcgacggacc ggatagcgac
      421 ccggtgcgcc gttactttat cgacaacgcg ctctactggg tctgtgaatt tcacatcgat
      481 gcgctgcgtt tggacgcggt gcacacgatt ttggatcact cgccgtacac tttcctcgaa
      541 caattgggag acgaagtcca ccaagccgca acgaccctga atcgccagat attgcttttc
      601 ccggaaagcg ccgccaacga cgcgcgcctg attcgctcgc gcgaggttgg cggctacgga
      661 ctcgacggcc agtggaacga cgattttcac cacgcgctgc gcggcgtgtt gagcgacgaa
      721 cgctccggct attatgagga ctacggcaag tttagccagt tagtcaaagc tttccgcgag
      781 ggcttcgtct attccggcga gtattctaaa catcgccggc accgccacgg cacatcgacg
      841 caagacattg ccgccgagcg ctttgtcgtg ttttcgcaaa atcacgacca ggtgggcaat
      901 cgtatgctcg gcgaacggct gagccaattg gtttcgttcg aatccttgaa gctggccgca
      961 gcggcggtga tcctttcgcc gtatgttccg ctgcttttca tgggcgagga atacggcgaa
     1021 gaggcgccgt ttcagtattt catcagccac ggcgacgccg gtctaatcga tgccgtgcgc
     1081 aacggccggc gcggcgagtt cgcttccttc ggttggctgg acgaaccacc cgatccccag
     1141 gatgaaaaga cttttttgcg cgccaagctc aatcatcagc tgaaaggcga cggcaaatac
     1201 cgcgtgctat gggatttcta ccgagagctg ctgcgcctgc gtcaagaggt ggcgcccttg
     1261 gcgcagttga gcaaagagcg ctgcgaagtc atcggcttcg acaacgatcg cgtgctgttg
     1321 atgcgccggt ggcagggcaa gcaagtcgtc gtgaccctat tcaatttcaa ttctgcgccg
     1381 gtgtcgctgg cgctgccgat agcgcccggc cgctggcgca aagcgctcga ctcgagcgag
     1441 gcgcgttggc gcggcgctgg cagcgagctg ccggcgcaat tcgactgcgc ggcaagcgtc
     1501 gcgttgcgtt taccgccgtc gtcgtcggcg ctattcatgc gcgtcaaaca acatccaaaa
     1561 aaaagctttg aaagttaaaa cgacgacgat gaaaatgtgg ccaggcaaac cttatcctct
     1621 cggcgccggc tggaatggcg ccggaattaa tttttcgatc ttttccgaaa acgccacagg
     1681 cgtcgatctt tgactattgg atgggcctga tgg
//
LOCUS       DATIRS010000014         1824 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_197772, whole genome shotgun sequence.
ACCESSION   DATIRS010000014 DATIRS010000000
VERSION     DATIRS010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1824)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1824)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1824
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197772"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..469)
                     /locus_tag="VLM90_00175"
     CDS             complement(<1..469)
                     /locus_tag="VLM90_00175"
                     /inference="COORDINATES: protein motif:HMM:NF014877.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11396.1"
                     /translation="MNQPPRNKKKLTRQLFGTDGVRGVANQEPMTSEMALKLGRAIAK
                     VLSESERDLPGRMPSPAFARRNGETDKHRFKILIGKDTRLSGYMLETALASGIVSMGA
                     DVLLVGPLPTPGVAFLTRSMRADAGVVISASHNPYQDNGIKFFSWDGFKLPDKV"
     gene            complement(494..1423)
                     /locus_tag="VLM90_00180"
     CDS             complement(494..1423)
                     /locus_tag="VLM90_00180"
                     /inference="COORDINATES: protein motif:HMM:NF019561.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CdaR family protein"
                     /protein_id="HSQ11397.1"
                     /translation="MKQLWEKIVALAGSNFGLKAVALTIAVGLWLAGHRDIERSIEVP
                     VEFRNIPGDLMVMDNRVDFVALRVTGPRTLVSTIDADEMKLSLDLISAKPGSLSYPLG
                     GSLFNIPRGVTVARITPPVVHLRMEPVIKLTLPVSVRLSGKPAAGFRVAQTTVQPARV
                     TVQGPAEEVRRLTAVETVPVDLHETRGVAKRQVRLATDGKPLTFSPDQVEISVALEEE
                     QASRDFAQVEINTQGYKGLFTFSPRTVFLRVAGAKSIVDKLQLNPDTVTLSLTGLAPG
                     EHSLAPVIKLPAGIEVVEQRPLSVRIRIAKPAP"
     gene            complement(1420..>1824)
                     /locus_tag="VLM90_00185"
     CDS             complement(1420..>1824)
                     /locus_tag="VLM90_00185"
                     /inference="COORDINATES: protein motif:HMM:NF014510.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA integrity scanning protein DisA
                     nucleotide-binding domain protein"
                     /protein_id="HSQ11398.1"
                     /translation="SLASKRVGALVVFQRDVGLSEFMEIGTRLDAWVIRELLESVFLP
                     HSPIHDGALVIQKNRVTAVRCLLPLSTNPHLRKSWGTRHRAALGVTEETDAVAVVVSE
                     QEGTVALVVGGNVTENIDGTRLRSALRDLIKS"
BASE COUNT          371 a          570 c          540 g          343 t
ORIGIN      
        1 cgaccttgtc gggaagtttg aagccgtccc aggaaaaaaa cttgatgccg ttgtcttgat
       61 agggattatg cgatgccgag atcaccacgc cggcatcggc gcgcatgctg cgggtgagaa
      121 atgccacccc cggggtcggc aacggaccga ccagcaacac gtcggcgccc atggaaacga
      181 tcccggaggc cagcgcggtt tcgagcatgt agcccgagag ccgggtatcc ttgccgatga
      241 gaatcttgaa gcgatgcttg tcggtctcgc cgttgcggcg ggcgaacgcc ggcgacggca
      301 tgcggccggg cagatcccgc tccgattcag ataaaacctt ggcgatggcg cggccgagct
      361 tgagcgccat ctccgaggtc atgggctctt ggttggcgac gccgcgcacg ccgtcggtgc
      421 cgaacagttg gcgcgtcaat tttttcttat ttcgtggcgg ttgattcatc ctggttgact
      481 ccctcgattg cattcacggc gccggcttgg cgatccgaat cctgacgctg agcggccttt
      541 gttcgacgac ctcgataccc gccggcaatt tgattactgg agccagacta tgttcgcctg
      601 gggccaaccc cgtcaaactc aaagtaaccg tgtctggatt caattgtagc ttgtcgacga
      661 tacttttggc accggcgacg cgtaaaaaaa ccgtcctagg cgaaaacgtg aacagccctt
      721 tatatccctg cgtgttgatc tcgacctggg cgaagtcgcg actggcctgc tcttcttcga
      781 gggcaacgga aatctccacc tggtcgggcg agaaggtaag cggtttgcca tcggtcgcca
      841 gccgcacttg acgcttagcg acaccgcggg tctcgtgcag atccaccggc acggtttcca
      901 ccgccgtgag gcggcgcact tcttccgccg gcccctgcac ggtcacccgc gcaggctgca
      961 ccgtggtttg ggcgacgcgg aaccccgccg cgggcttgcc cgataagcgc accgaaaccg
     1021 gcagggtcag cttgatcacc ggctccatgc gcagatggac caccggcggg gtaatgcgcg
     1081 ccaccgtcac gccgcgcggg atattgaaca aactgccacc caaaggatag ctgagcgacc
     1141 caggcttggc gctgatgaga tcgagcgaca gtttcatttc atcggcatcg atggtcgaaa
     1201 ccaacgtgcg cggtccggtg acgcgcaagg ccacgaaatc gacacgatta tccatcacca
     1261 tgagatcgcc gggaatattg cgaaactcca ccggcacttc gatggagcgc tcgatatcgc
     1321 ggtggccggc gagccaaagc cccacggcga tggtcaaagc caccgccttg aggccaaagt
     1381 tgctgccggc cagcgcgacg atcttttccc agagctgttt catgacttga tcaaatcccg
     1441 caacgctgaa cgcaacctgg tgccatcgat attttcggtg acattgccgc cgaccaccag
     1501 cgccacggtg ccttcctgct ccgacaccac gacggcgacg gcatcggtct cctcggtgac
     1561 gccaagggcg gcacgatggc gcgtgcccca ggatttacgc aggtgcggat tggtgctgag
     1621 cggcagcaaa cagcgcaccg cggtcacccg gtttttttga atcaccaggg cgccgtcatg
     1681 aatcggcgaa tggggcagaa agacactttc caacagctca cggatgaccc aagcatcgag
     1741 ccgcgtgccg atttccataa attcgctcaa gccaacatcc cgttgaaaca ccaccaaggc
     1801 gccgacacgc ttgctggcga gcga
//
LOCUS       DATIRS010000015         1941 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1672918, whole genome shotgun sequence.
ACCESSION   DATIRS010000015 DATIRS010000000
VERSION     DATIRS010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1941)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1941)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1941
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1672918"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            394..1755
                     /gene="radA"
                     /locus_tag="VLM90_00190"
     CDS             394..1755
                     /gene="radA"
                     /locus_tag="VLM90_00190"
                     /inference="COORDINATES: protein motif:HMM:TIGR00416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HSQ11399.1"
                     /translation="MAKAKSVYACQNCGNQSPKWLGKCPDCNQWNTYAEEHFEKATTT
                     RGELSLGSKEEPTSIGDINTAEEGRVQSGIGEFDRVLGGGLVPGSVILIGGDPGIGKS
                     TLLLQAVAAVSQKGLTCLYVSGEESQRQIKMRAERLGVTAANLLVLSETSLERILEHV
                     KKIKPGLLVIDSVQTMFSSTIPSAPGSIAQVRETSGSIIVLAKKTGLTTFLIGHVTKD
                     GAIAGPRLLEHMVDTVLYFEGERGHSFRILRAVKNRFGSTNEIGVFEMKEAGLAEVSN
                     PSEIFLMERPLQVPGSAVVCSIEGTRPILVELQALVCRSFLAVPRRTTIGVDHNRVAL
                     LVAVLEKKMGAKLFDQDIFVNVAGGVNVDEPAVDLGVIAAISSSSREAALDPKTVFFG
                     EVGLAGEVRGISQAETRVKEAGKLGFERCILPASNVAQLKHIQHPKLAAVSSIQECWK
                     LLF"
BASE COUNT          451 a          594 c          528 g          368 t
ORIGIN      
        1 tgaatagcgg tagagccgtg gcgatgagcg tctacataat ccgggccttt ttgaagctga
       61 gggaaaccct agcggcaaac caactgattc ttaaacgcct agctgaaatt gacaagacgc
      121 tactccagca cgatagcgcg cttcgcgata tataccgaaa gctgctgccg ctcctacaac
      181 cgccgccgga accacctcgg cggcgaatcg gttttcgcca ggacaagtag cgatcactct
      241 caacgattac caagagcggg ttttggacta gcaagtaaac ttcatcactt cacgctgaac
      301 ttactggcag catcgagcga acgtccgagg ctatccgtca ctgaaaaatt gccaagcgac
      361 aaattggcga tcagcgtgat aagagtcact accatggcta aagctaagtc cgtctacgcc
      421 tgccagaatt gcggcaacca gtcgcccaag tggctgggca aatgccccga ctgcaatcag
      481 tggaatacct acgccgaaga acatttcgaa aaagccacca cgacccgtgg cgagctgagc
      541 ctcggcagca aagaagaacc cacctccatc ggtgatatca acaccgccga agagggccgg
      601 gtgcagtcgg gcatcggcga gttcgaccgc gtcctcggcg gcggtctggt gcccggctcg
      661 gtgatcctca tcggcggcga tcccggcatc ggcaaatcaa cgctgctgct ccaagccgtc
      721 gccgcggtca gtcagaaagg gctcacctgt ctctacgttt ccggcgagga atcccaacgg
      781 caaataaaaa tgcgcgccga acgactcggc gttacggcgg ccaatctgct cgtcctaagc
      841 gaaacctcgc tggaacgcat tctcgaacat gtgaaaaaga tcaaaccggg tctgttggtc
      901 atcgactcgg tgcagacgat gttctcgtcg accatcccgt ccgcccccgg cagcatcgcc
      961 caggtgcgcg aaacctcggg ctcgatcatc gtcctggcga agaaaaccgg actgacaact
     1021 ttcttgatcg gccatgtcac caaggacggc gccatcgccg ggccgcgcct gctcgaacat
     1081 atggtcgaca ccgtgctcta cttcgaaggc gagcgcggcc atagttttag aatcctgcgc
     1141 gcggtcaaaa accgcttcgg ctcgaccaac gagatcggtg tcttcgagat gaaagaagcc
     1201 ggcctcgccg aagtcagcaa tccctcggaa atatttctaa tggagcggcc gctgcaagtg
     1261 cccggctccg ccgtcgtttg cagcatcgaa ggcaccaggc cgatcttggt tgagttgcag
     1321 gcgctggtct gccggtcgtt tctcgccgtg ccgcggcgca ccaccatcgg cgtcgaccac
     1381 aaccgcgtcg ctctgttagt cgccgtgttg gaaaagaaga tgggcgccaa gctgttcgat
     1441 caagatattt tcgtcaacgt cgccggcggc gtcaatgtcg acgaaccggc ggtggatttg
     1501 ggcgtcatcg ccgccattag ttcgagcagc cgcgaagccg ccctcgaccc caaaaccgtt
     1561 ttcttcggcg aagtcggcct cgccggcgaa gtccgcggca tctcccaggc cgaaacccgg
     1621 gtcaaagaag ccggtaaact cggcttcgaa cgctgcatcc tccccgcgag caacgttgcc
     1681 cagttaaaac atatccaaca tcccaagctc gccgccgtca gctctataca ggaatgttgg
     1741 aaactgctct tctgaacaaa ttggaatgtc tcctgcaaag ccgcacaggc cgtaaaggtg
     1801 acgggccggt gcccgtgatc ccgagcgaat gcgagggatc aagatagatt tctccctgtg
     1861 gtcgaaatga caagatttcc gaacttagcg cctttgcgcc ttagcgggaa aatctccgaa
     1921 tcagataacc tgcggattgc c
//
LOCUS       DATIRS010000016         2024 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1377928, whole genome shotgun sequence.
ACCESSION   DATIRS010000016 DATIRS010000000
VERSION     DATIRS010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2024
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1377928"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1006)
                     /locus_tag="VLM90_00195"
     CDS             complement(<1..1006)
                     /locus_tag="VLM90_00195"
                     /inference="COORDINATES: protein motif:HMM:NF014605.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HSQ11400.1"
                     /translation="MKDEKKQVAGAVTEIGVNQLEFHDPRLFRDLLGQHDQHIKILQN
                     TLQVKIRVRGSTLEIEGDPLQVELGSQILRQLYALLEKGYPVYASDVDYAIRILSGDS
                     RARLQDIFLDTIYISAHKRTITPKSIAQKAYIDAIRRHDIVFGIGPAGTGKTYLAMAM
                     AVAELMKNNYVRIILTRPAVEAGEKLGFLPVDLAEKVNPYLRPLYDALHDMVDFDRAR
                     KLVERGTIEVAPLAFMRGRTLNDSFVILDEAQNTTPEQMKMFLTRLGYGSKAVITGDA
                     TQIDLPAGKPSGLKEASRILKNVTGIRFIKFTEKDVARHHLVQEIITAYERDENRSIP
                     P"
     gene            complement(1003..1431)
                     /locus_tag="VLM90_00200"
     CDS             complement(1003..1431)
                     /locus_tag="VLM90_00200"
                     /inference="COORDINATES: protein motif:HMM:TIGR00149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="secondary thiamine-phosphate synthase enzyme
                     YjbQ"
                     /protein_id="HSQ11401.1"
                     /translation="MLTIRTKKITENAAGFCDIIDITAKLREHIEGENIRSGLASLFV
                     SGSTAALTTIEYEPGLIEDLKEFVEKHMPSTRRYHHDDRWNDDNGFSHLRASLFGPSL
                     TIPIETGQPCLGTWQQVVLLDFDNRPRTREIVVQLIGETE"
     gene            complement(1500..>2024)
                     /locus_tag="VLM90_00205"
     CDS             complement(1500..>2024)
                     /locus_tag="VLM90_00205"
                     /inference="COORDINATES: protein motif:HMM:NF014342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHHA1 domain-containing protein"
                     /protein_id="HSQ11402.1"
                     /translation="GALDLIHNYEQRLKEIGDLVRGSADDAVDKVKKLLDRQKELEKE
                     IEKLRGQYEKDQILALLAKKQSVNGADILISRVDGLDGRQLRDIADQLKEKLGTGVVV
                     LASAGEANVNLVASVSKDLTKRFHAGNIIKELAAMVGGGGGGRPDFAQAGGKEPAKID
                     AALKRAEELIQQAK"
BASE COUNT          370 a          574 c          589 g          491 t
ORIGIN      
        1 cgggcgggat ggagcgattt tcgtcgcgct cgtaggcggt gatgatttcc tgcaccaagt
       61 ggtggcgcgc cacgtctttt tcggtgaact tgataaagcg aatgccagta acgtttttaa
      121 gtatgcgcga cgcttccttc aatcctgatg gttttcccgc cggcaagtcg atctgggtgg
      181 cgtcgccggt gatcaccgct ttcgagccgt agcccagccg cgtcaagaac atcttcatct
      241 gctcgggcgt ggtgttttgc gcttcgtcca gaatcacgaa cgaatcgttc aaggtgcggc
      301 cgcgcataaa cgccagtggc gcgacttcga tggtcccgcg ttccaccagc ttgcgcgcgc
      361 ggtcgaaatc gaccatgtcg tgcagggcgt cgtaaagcgg gcgcaagtag ggattgacct
      421 tctccgccag atcgacgggc aagaagccga gtttttctcc ggcttccacc gccgggcgcg
      481 tgaggatgat tctcacgtaa ttattcttca tcaattcagc cacggccatc gccatggcga
      541 gataagtctt gccggtgccc gccgggccga taccgaagac gatatcgtgg cggcggatcg
      601 cgtcgatgta ggctttttgg gcgatgcttt taggcgtgat cgtgcgcttg tgcgccgaga
      661 tataaatcgt gtcgagaaaa atatcttgca gccgggcgcg gctgtcgccg ctcaagatgc
      721 gaatcgcgta gtcgacgtcg ctggcgtaaa ccgggtagcc tttttccaac agagcgtaga
      781 gttggcgtag aatctggctg ccgagctcga cctgcagcgg atctccttca atctccaagg
      841 tggagccgcg cacgcggatt ttcacctgca acgtattctg caggatcttg atatgctggt
      901 cgtgttggcc caaaagatcg cggaacaaac ggggatcgtg aaactccagt tgattgacac
      961 cgatctccgt caccgcgccg gcgacctgtt tcttttcgtc tttcactcgg tttctcctat
     1021 gagttggacg acgatttcac gcgtgcgtgg acgattgtcg aagtcaagga ggaccacctg
     1081 ctgccaggta cccaggcaag gctggccggt ttctatcggg atcgtcagcg aagggccgaa
     1141 cagcgaggcg cgcaggtggg agaaaccgtt atcgtcgttc caccggtcgt cgtgatgata
     1201 gcggcgggtg gacggcatgt gtttttcgac gaactctttc aaatcctcaa tgagccccgg
     1261 ttcatattca atggtcgtca gcgccgcggt ggagccgctc acgaatagcg acgccaaacc
     1321 gctgcgaata ttttctcctt cgatatgttc tctcaacttg gcggtgatat caatgatgtc
     1381 gcagaatccg gccgcgttct cggtgatttt cttagtgcga attgtgagca cgctatctca
     1441 ccgagcgccg cgcgcccgcg tccggcaaag aatggccatt ttgtatgaac cgcttttgct
     1501 catttagctt gctggatgag ttcctcggca cgtttgagag ccgcgtcgat cttcgccggc
     1561 tccttgccgc cggcttgagc gaagtcgggc cgcccgccgc cgccaccgcc gaccatggcc
     1621 gcgagctctt tgatgatgtt gccggcatga aagcgcttgg ttaagtcctt actcacggag
     1681 gcgactagat tgacgttggc ttcaccggcg ctggccaata ccacgacccc cgtgcccagt
     1741 ttctccttca actgatcggc gatgtcgcgc aactgcctgc catcgaggcc gtcgacacgg
     1801 ctgatcaaaa tatcggcgcc attgaccgac tgtttcttgg ccaggagcgc gaggatctgg
     1861 tccttttcgt actggccgcg cagcttttcg atttccttct ccagctcttt ttgtcgatcg
     1921 agcagttttt tgaccttgtc gacggcgtcg tcggcgctgc cgcgcacgag atcgccgatc
     1981 tctttcagcc gctgttcata gttgtgaatg agatcgagag cacc
//
LOCUS       DATIRS010000017         1714 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_591443, whole genome shotgun sequence.
ACCESSION   DATIRS010000017 DATIRS010000000
VERSION     DATIRS010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1714
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_591443"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..683
                     /locus_tag="VLM90_00210"
     CDS             <1..683
                     /locus_tag="VLM90_00210"
                     /inference="COORDINATES: protein motif:HMM:NF016032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0042398 - cellular modified amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glutamate-cysteine ligase family protein"
                     /protein_id="HSQ11403.1"
                     /translation="IWTDTDKSRQGLLKFAFAPDASFTHYVEYALDVPMYFIIRHHDY
                     INMTGVTFREYLKYGRNGERATIEDWADHLTTLFPETRIKRYIEVRSVDSQPPELMPA
                     LSALIKGAFYDNDCLHAAWDLVKGWSWDERNEVYLDSHVNALTTRFRRHTLLDLAKEF
                     LEIAAEGLRRQNVVNDLGQDETIYLEPLKTLLAKGKCPADIILEKWQGELHGNIQKLI
                     DFTAYKLP"
     gene            complement(788..>1714)
                     /gene="nagZ"
                     /locus_tag="VLM90_00215"
     CDS             complement(788..>1714)
                     /gene="nagZ"
                     /locus_tag="VLM90_00215"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: protein motif:HMM:NF003740.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HSQ11404.1"
                     /translation="QVRELSLEVASLSREWPHWISVDQEGGRVARLRRPFTEWPPMMT
                     LGRSGDPELAGDFASALAAELRAAGVNLDYTPVLDIHTNSKNPVIGDRALGTTADVVA
                     AFGAALIRKLHEGGIVACGKHFPGHGDADKDSHFDLPIVRKSMEELQAIELAPFADAC
                     RNQIESLMTAHVAYPALDPKLPATLSEAIVTGLLRHQLGYDGVVFSDDLAMRAISDRY
                     SVDEAAALAVRAGVDVLLFCHEIDKAAAAFEFLCAEAERDPVLRARVEESYRRVTELK
                     RRYLTRFTGVAENDIIARLAELNHRKLLNELV"
BASE COUNT          356 a          513 c          504 g          341 t
ORIGIN      
        1 atatctggac cgacaccgac aagagccgcc aaggcctgct gaaattcgcc ttcgcgccgg
       61 acgcatcctt cacccactat gtcgaatacg ccctcgacgt gccgatgtat ttcatcattc
      121 gccatcacga ctatatcaac atgaccggcg tgacctttcg cgagtatttg aagtatggcc
      181 gcaacggcga gcgcgcgacc attgaagatt gggccgatca tctgaccacg ctgtttcccg
      241 agacccgcat caagcgctac atcgaagtgc gctcggttga cagccagccg ccggaactga
      301 tgccggcgct gtcggcgttg atcaaagggg cgttttacga caacgattgc ttgcacgcgg
      361 cttgggatct ggtcaaaggc tggagttggg acgagcgcaa cgaagtctat ctcgattccc
      421 atgtcaacgc cctgacgacg cgcttccggc gccatacgct gctcgatctc gccaaggagt
      481 ttttggaaat cgccgcggaa ggtttgcggc ggcaaaacgt cgtcaacgat ttgggccagg
      541 atgagacgat ctatctcgaa ccgctcaaga cgcttttggc caaaggcaaa tgtcccgccg
      601 acatcatctt ggaaaaatgg cagggcgagt tgcacggcaa tatccaaaaa ttgatagact
      661 tcaccgccta caaactgccg taagttttag ttggacgtca ttccggcgta ggccggaatc
      721 catccgatgg atttgaccct ggatgccggt ttgcaccggc atgacggaag ggtctgtctt
      781 tcccagttca aaccaattca ttgagtaact ttcggtggtt caactccgct agccgcgcga
      841 tgatgtcatt ctccgccacg ccggtgaagc gtgtcaaata acgccgcttg agttccgtga
      901 cccgccggta gctctcttcg acgcgcgcgc gcaggactgg gtcgcgctcg gcttcagcgc
      961 agagaaattc aaacgccgcc gccgctttgt cgatttcatg gcaaaacagc aggacatcga
     1021 cgccagcccg gacggcgagg gctgcggcct cgtcgacgct atagcggtcg ctgatcgcgc
     1081 gcatggccaa gtcatcgctg aatacgacgc cgtcgtaacc caactggtgg cgcaggagtc
     1141 cggtgacgat cgcttcggac agagtggccg gcagtttcgg atcgagggcg ggataggcga
     1201 catgggcggt catcaaggat tcgatttgat tgcggcaggc atcggcaaag ggcgcgagtt
     1261 cgatggcttg gagctcttcc attgatttcc gcactatcgg caagtcgaag tgcgaatctt
     1321 tgtcggcgtc cccatgaccg ggaaagtgtt tgccgcaagc gacgatgccg ccctcgtgca
     1381 gcttgcggat gagcgcggcg ccgaacgcgg ccaccacatc ggccgtggtg ccgagcgcgc
     1441 ggtcaccaat cacgggattc ttcgagttgg tatggatatc gaggacgggc gtgtaatcga
     1501 ggttcactcc ggcggcccga agctcggccg caagcgccga cgcgaaatcc ccggccagtt
     1561 caggatcgcc actgcgcccc agcgtcatca tcggcggcca ctcggtgaac ggacgccgga
     1621 gccgcgccac tcgtccaccc tcctgatcga cactgatcca atgcggccat tcacgggaga
     1681 gagatgccac ttccagcgac agttcgcgca cctg
//
LOCUS       DATIRS010000018         1977 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1673067, whole genome shotgun sequence.
ACCESSION   DATIRS010000018 DATIRS010000000
VERSION     DATIRS010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1977)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1977)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1977
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1673067"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1844)
                     /gene="uvrB"
                     /locus_tag="VLM90_00220"
     CDS             complement(<1..1844)
                     /gene="uvrB"
                     /locus_tag="VLM90_00220"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: protein motif:HMM:NF003673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HSQ11405.1"
                     /translation="MLRDQDSGRFRLVSEFKPQGDQPQAIDNLVKGLAAKRRHQVLLG
                     VTGSGKTFTMANVVAQVNRPTLVMAPNKTLAAQLYEEFRLLFPENAVRYFVSYYYYYQ
                     PEAYLPSTDTYIEKDSSINDEIDKLRHSATKALLERRDTLIVASVSCIYGLGSPEAYF
                     DLMVYVEEGTTVNRDQMLRKLVDIQYQRSDYDFHRGTFRVRGDIVEVFPAYEDRSALR
                     IEFFDETIESIHEIDPIRGKVLRRIDKATIYPASHYVTGQDRRKQAVLGIRLELKERL
                     KELQDQRKLLEAQRLQQRTLYDLELLEEMGFCPGIENYSRHLTGRQPGEPPPTLLSYF
                     PNDFLLVIDESHVTVPQIGGMYRGDRSRKETLVEYGFRLPSALDNRPLNFDEFAAMIN
                     QMIYVSATPAPFELRESNGAVIEQVIRPTGLMDPAIVVRPARTQVDDLLEEIRKRVER
                     KERVLVTTLTKRMAEDLTQYYQDLNVKVRYLHSDIETLERVEIIRQLRSGQFDVLVGI
                     NLLREGLDLPEVSLVAILDADKEGFLRSDRSLIQTIGRAARNVNGTVILYADGVTDSM
                     NRAMDETERRRRLQAAFNKKHGITPQTIIKALGSPMVKIYDADYVDIP"
BASE COUNT          384 a          579 c          578 g          436 t
ORIGIN      
        1 atcggaatgt cgacataatc cgcgtcgtag atcttcacca tgggcgagcc cagggccttg
       61 ataatagttt gcggcgtgat cccatgcttt ttgttgaacg ccgcctgcaa tcggcgccgc
      121 cgctcggttt catccatggc acgattcatc gaatcggtga caccgtcggc gtagaggatc
      181 accgtgccgt tgacgttgcg cgcagcccgg ccgatggtct gtatcagcga tcggtccgat
      241 cgtaaaaagc cttctttgtc ggcgtcgagt atcgccacca acgacacttc cggcaaatcc
      301 aacccttcgc gcaataaatt gatgccgacc aggacatcga actggccgct gcgcagttgg
      361 cggatgatct cgactcgttc caaggtctcg atgtccgaat ggaggtagcg cactttgacg
      421 ttgagatctt gataatactg ggtgagatcc tcggccatgc gcttggtcaa ggtggtcacc
      481 aagacgcgct ctttgcgctc gacccgtttg cggatctcct ccaacaggtc gtccacctgg
      541 gtgcgcgccg ggcgcacgac gatggccgga tccatcaaac cggtggggcg gatcacctgc
      601 tcgatcacgg cgccgttgct ttcgcgcagc tcgaagggcg ccggggtcgc tgacacgtag
      661 atcatttggt tgatcatcgc cgcgaactca tcgaaattga gcggccggtt gtcgagggcc
      721 gacggcaagc gaaagccgta ttcgaccaag gtttctttgc gcgagcggtc gccgcggtac
      781 atgccgccga tctgcggcac ggtgacatgg ctctcgtcga tcaccaggag aaaatcgttg
      841 ggaaagtaac tgagcaaagt cggcggcggc tcgcccggct ggcgcccggt cagatggcgc
      901 gagtaattct cgattcccgg acagaagccc atctcttcca acagttcgag gtcgtagagc
      961 gtgcgctgct gcagacgctg cgcttccaac aatttgcgct ggtcttgcag ctccttcagc
     1021 cgctctttta attccagacg aatgcccagg actgcctgct tccgacggtc ctgccccgtg
     1081 acataatggc ttgccggata aatcgtcgcc ttgtcgatcc ggcgcaaaac cttgccgcgg
     1141 atcggatcga tctcgtggat cgactcgatg gtctcgtcga aaaattcgat gcgcagcgcc
     1201 gaacgatctt cgtaggccgg gaacacttcg acgatgtcac cgcgcacgcg aaacgtgccc
     1261 cgatggaaat cgtaatcgct gcgttgatat tgaatatcca ccagcttgcg cagcatctga
     1321 tcgcgattga ccgtcgtgcc ttcttcgaca tagaccatca aatcgaagta cgcttccggc
     1381 gagcccaagc cgtagatgca cgagacgctg gcgacgatca gagtatcgcg ccgctcgagc
     1441 agcgccttgg tcgccgagtg acgaagttta tcgatctcgt cgttgatcga cgaatctttc
     1501 tcgatgtagg tgtcggtgga cggcaggtag gcttccggct ggtagtaata gtagtagctg
     1561 acgaagtaac gcaccgcgtt ttccgggaac agcaggcgaa attcttcata gagttgcgcc
     1621 gccagggtct tgttaggcgc catgacgagg gtcggccggt tcacctgggc aacgacgttg
     1681 gccatggtga acgtcttgcc cgacccggtg acccccaaca gcacctggtg gcgccgcttg
     1741 gcggcgagcc ctttaaccag gttatcgatc gcctggggct gatctccttg cggtttgaac
     1801 tccgaaacca gccggaatcg gccgctgtct tgatcgcgta gcatgacgcg ccgaactatc
     1861 tcgcctgccc gccgtaaagc ttatcgatat agccgctctt atcgatttcg gtgagcgtgc
     1921 gcgcgtcgat aaaatcgccg ggcttatact gcgcgtactt gggctggttt tccgcca
//
LOCUS       DATIRS010000019         2429 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_296891, whole genome shotgun sequence.
ACCESSION   DATIRS010000019 DATIRS010000000
VERSION     DATIRS010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2429)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2429)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2429
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_296891"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            71..1132
                     /locus_tag="VLM90_00225"
     CDS             71..1132
                     /locus_tag="VLM90_00225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11406.1"
                     /translation="MRTKKMFPTYFFGILYLLAVAPPSVHSQTPFFQGKTIKIINNDP
                     GGTAGLRVKVVMTYLRKYIPGNPTLLIEFVEGGGGRRAANQVFQNAKPDGLTVGALSS
                     AIIGLQVMKETGVMYDIDKFIYLGTPVSENHNVIYTRRELGLNSLDKLRAASGLRLGA
                     QEVGAVAYISARLFGYFLDIKAPKFVTGYTSLEADVALRNGEIDSRSNNVTSVLSRNR
                     DWIDKGIMDFHAIIAVPKDDKPSHPRLAQLPEIESFAKTDRERKLLTMWRSFRTATSP
                     FVLPPGTPKDRVEILQEAMRKVFNDPEFRAEFKKLANDDASPLMAEELAKVIQDMPRD
                     AEIVELLKKFSGVDPLPMR"
     gene            1176..2261
                     /locus_tag="VLM90_00230"
     CDS             1176..2261
                     /locus_tag="VLM90_00230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11407.1"
                     /translation="MKNHSLRLGLLVCGVYVASVARSYAAEKPFYEGKTLTVLINYAA
                     GGPTDVEGRLLARHLGRHVAGQPNVIVQNISGAGGIIGTNFLGQVAKADGLTMGYFTG
                     ALFHQQVRNPALRTDLSKYAFISGIQGVTVSYIRSDVAPGIKKPGDLLKAQRFKAGGL
                     SNDSFKDVAFRLSFDLLGLQYDYVTGYNSSADARLAVQRNEVQYHDETLPAYRSQVEP
                     NMVKPGQVTALYHADLIDADGGVTDSPDVPELSSFTKFYTQVLGKPPSGIKYEALKAA
                     NIAGTNMTRAILLPPGAPKEAVAALKQAAASLSKDEEYLADAVKVMRFRPRFEMGASG
                     ERLYQRATGISPDLAKFIRQFIEQERK"
BASE COUNT          534 a          664 c          715 g          516 t
ORIGIN      
        1 gattggcttt gtcccgtgcc gctggttggc ctgcgatgat tcggataatt cgtgaatccc
       61 ggaggttcgc atgagaacga aaaaaatgtt tccgacatac tttttcggca tcttgtatct
      121 gcttgcggtg gctccgccat cggttcattc ccagacgcca ttttttcagg gcaagacaat
      181 caagatcatc aataacgatc ccggcggcac cgcagggctg cgggtcaagg tcgtgatgac
      241 ctacctgcgc aaatatattc ctggtaatcc aacgttgctt atcgagttcg tcgaaggcgg
      301 cggcggacgt cgggcggcca accaggtttt tcagaacgct aagccggacg gtctgactgt
      361 cggcgcgctc agcagcgcga tcatcggcct tcaggtcatg aaagagacag gtgtcatgta
      421 tgacatcgat aagttcatct atctcggcac gccggtgagc gagaaccaca acgtcatcta
      481 cacgcggcgc gagttgggac tcaattcctt ggacaaactg cgcgcggcca gcgggcttcg
      541 ccttggcgcc caggaagttg gcgcggtggc gtatatctcg gcgcggctgt tcgggtactt
      601 tctcgatatt aaggcgccta agttcgtcac cggctacaca tcgctggaag ccgacgtggc
      661 gttgcgcaac ggcgagatcg attcgcgctc gaataacgtg acttcggttc tgagccgcaa
      721 tcgcgactgg atcgacaagg gcattatgga ttttcacgcg atcatcgccg tgccgaaaga
      781 cgacaagcca tcgcacccgc gcctggcgca actgccggag atcgagagct tcgccaaaac
      841 cgatagagag cgaaagctac tgaccatgtg gcgcagtttc cgaaccgcca cttcgccgtt
      901 cgtgttgccg ccggggacgc cgaaggatcg cgtggagatc ctgcaagagg cgatgcgcaa
      961 ggtgttcaat gatcccgagt tccgcgctga gtttaagaag ctcgccaacg acgatgcttc
     1021 accgctgatg gccgaagagc ttgccaaagt gattcaggac atgccgcgtg acgcggagat
     1081 cgtcgagttg ctgaagaagt tctccggtgt cgacccgctg cctatgcgat aaactgcgag
     1141 ctgcggggta tggatcccta aaaaaggagt agggaatgaa gaatcattca ttacgtcttg
     1201 gcttgttggt ttgcggcgtt tacgttgcgt cggttgcacg cagttatgcc gccgagaaac
     1261 cgttctacga gggcaagacg ctcacggttt tgatcaatta tgccgccggc ggccccaccg
     1321 atgtcgaggg ccggcttttg gcgcgccatc tgggcaggca tgtggcggga caaccgaacg
     1381 tcatcgtgca aaatatttcc ggcgcgggcg gcattatcgg caccaacttc ttggggcaag
     1441 tcgctaaagc cgacgggctg accatgggct atttcaccgg cgcgctgttt catcagcagg
     1501 tgcgaaaccc cgcgctgcgc accgatctgt cgaaatatgc tttcatctcg ggcatccagg
     1561 gcgtcaccgt gtcttacatt cgctcggatg tcgctcccgg catcaagaag cccggcgatc
     1621 tgctaaaagc gcagcggttc aaagccggcg gtctgagcaa cgacagcttc aaggatgtcg
     1681 cttttcggct ttccttcgat cttttaggct tgcagtacga ctacgtgacc ggttacaact
     1741 ccagcgccga cgccagattg gcggtgcagc gcaacgaagt gcagtatcat gatgaaaccc
     1801 tgccggcgta ccgatcgcag gtcgagccca acatggtaaa acccggccaa gtgacagcgc
     1861 tgtaccacgc ggacttgatc gatgctgacg gcggtgtcac cgatagtccg gatgttccag
     1921 agttgtcgtc gttcacgaaa ttttacaccc aagtgttggg caagccgcct tccggtatca
     1981 agtacgaagc tttgaaagca gccaacatcg ccggcaccaa catgacccgg gcgatattac
     2041 tgccgcccgg cgcgcccaag gaggcggtag ccgcgctgaa gcaagccgct gcgtcgctat
     2101 cgaaggacga agaatatctc gccgatgcag tgaaggtaat gcgctttcgc ccgaggtttg
     2161 aaatgggcgc gagcggcgaa cggctctatc aacgcgccac ggggatttcg cctgatttgg
     2221 ccaaattcat ccggcaattt atcgagcagg agagaaagta agcccgcgtc aatgggaatt
     2281 aaggttgaga tggagttcca attgattgca ctcagtaaga aagatttctc gctgcgctcg
     2341 aaatgacaga tcgcgagttg ccgtcatccc gagcgacaga tgtatgaaac tctttaggag
     2401 tccttcgacg gcgctcaggg cgaacggag
//
LOCUS       DATIRS010000020         2087 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_591935, whole genome shotgun sequence.
ACCESSION   DATIRS010000020 DATIRS010000000
VERSION     DATIRS010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2087
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_591935"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..537)
                     /locus_tag="VLM90_00235"
     CDS             complement(<1..537)
                     /locus_tag="VLM90_00235"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ11408.1"
                     /translation="MALAANVAAQSQPLKKIRIGYPSLSFRQSNVWVAREVGLFTKYG
                     LEVEPIFLRGGQMATQALVAGDPPIVNIGTVVQASLQGYNLVLVAAVVTKYDQIVFAR
                     KGINKLEELKGKKFGISGYGSATHNAANILFQHLNLEINKDIVLVPTGPDAERMGAMM
                     AGRIDATFFTSSAAAPARK"
     gene            complement(623..814)
                     /locus_tag="VLM90_00240"
                     /pseudo
     CDS             complement(623..814)
                     /locus_tag="VLM90_00240"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
     gene            complement(1062..>2087)
                     /locus_tag="VLM90_00245"
     CDS             complement(1062..>2087)
                     /locus_tag="VLM90_00245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11409.1"
                     /translation="SENASEVYRVLADAYEERGLIDRALTYHELAGSPKEKLDALNDK
                     AARALLNAASKSKSRSGQENYLKAVVDYHPDSSAAAEATKKLAALAKDENQGMRMSKQ
                     FLLEHPEIRGPQGLALKASLFDGNPRNMEIAERGAILLNDNDLMVYYQTPWGVRSQNH
                     RLTKAATERFYVALREKNQQVAAADANQRGKDSVGGIRNVPSAIVRGERERRGQSSDE
                     REDATFTLIREAGGSSYRRVLDAELITENERNPGSQYQLPPIQGSISASRFSMTGALP
                     TGFGGSQLAVGTDQGAPYGGVQFPIPLLQGFIPVDFMVQGRPGGISVYPRIRTGVDSG
                     SDSELYR"
BASE COUNT          392 a          579 c          636 g          480 t
ORIGIN      
        1 ctttcgcgcc ggtgctgccg cggaagaggt gaagaatgtc gcatcgatcc gtcccgccat
       61 cattgctccc atccgttccg cgtccggccc ggtgggaacc agcacgatat ccttgttgat
      121 ctccagattg aggtgctgaa ataggatatt ggcggcgtta tgggtcgccg agccgtagcc
      181 gctgatgcca aacttcttgc ctttgagctc ttctagtttg ttaatgcctt tgcgcgcgaa
      241 aacaatctga tcgtacttgg tcacgacggc ggcgaccagc accaggttgt agccttgcaa
      301 actcgcttgc acgacggtgc cgatattgac gatcggcgga tcgccggcca ccagcgcctg
      361 ggtggccatc tggccgccgc gcagaaagat cggttcgact tccagtccgt atttggtgaa
      421 caggccgact tcccgagcga cccagacgtt gctttggcga aagctcaaag acggatagcc
      481 gatgcgaatc ttcttgagcg gctggctttg cgcggcgaca ttcgcggcta gggccatgac
      541 tatgcatact aagagattga ttgaacgcaa tactgttttc atacgattcg ttgctgggaa
      601 tcctttctcc aagatgtttt cattagcaaa ttttcattgc aatttcatgt accgcttgaa
      661 gccggcgagc ttcggcggcg acgacggcga gcagggcgcg gctgacgccc aagcacaagc
      721 cggtgataat aaacggcagg gcgccgggca ggcgaatctt gtaggtggtc tgccagctcg
      781 acaaacgcat cgactgagcg agctcgagcc agactgggtc gaggtttgag cagttcgttt
      841 tccactaata atcgcgcccg cagttcccgc agcgcgatgc cggcgaactc ggagatacag
      901 ccgcgcagga cttcctttct gacagggtgg ccgatgatcg tcattgctga tttactcacc
      961 gaggatggaa gatcgaggat ggtaaatccg aatttccatc ttccttcctc aatcctccat
     1021 cctcaacttt cttactgcta attgcgaacg gcgcggcgcc ttcagcgata aagttccgag
     1081 tccgagccgc tatcgacgcc ggtacggatg cgcggataga ccgagatgcc gccggggcgg
     1141 ccttggacca tgaagtcgac agggatgaag ccttgcaaga gcggtatagg gaattgtacg
     1201 ccgccataag gcgcgccctg atccgtgccc actgccaact ggctgccgcc aaagccggtg
     1261 ggcagagcgc cggtcatgct aaagcggctg gccgatatgc tgccttgaat cggcggtagt
     1321 tgatattggc tgccgggatt gcgttcgttt tcggtgatca gctcggcatc gagcacccgg
     1381 cgataggacg agccgccggc ttcgcggatc aaggtgaagg ttgcgtcttc gcgctcgtcg
     1441 gaggattggc cgcggcgttc gcgttcgcca cggacgatcg cgcttggcac gttcctgatg
     1501 ccgccgacgc tgtctttgcc gcgctggttg gcatcggcgg cggcgacttg ctggtttttt
     1561 tcgcgcaggg cgacgtagaa acgctcggtg gccgctttgg tcagacgatg gttttggctg
     1621 cgcacgcccc aaggggtctg gtagtaaacc atcaggtcgt tgtcattgag caaaatcgcg
     1681 ccccgttcgg cgatctccat gttgcgcgga ttaccgtcga acagggacgc cttgagcgcc
     1741 aagccttggg gaccccggat ctccggatgc tccaatagga attgcttgct catgcgcatg
     1801 ccttgatttt catctttggc gagcgcggcg agcttcttgg ttgcttcggc ggcggcgctc
     1861 gagtcgggat gataatcgac caccgccttc aaataatttt cctggccgct gcgggatttc
     1921 gacttgctgg ctgcgtttaa caaagcgcgg gcggctttgt cattgagggc gtcgagtttt
     1981 tctttaggcg aaccggcaag ctcgtgatag gtgagagcgc gatcgatcag gccgcgttct
     2041 tcataggcgt cggcgagcac acgataaact tcgctggcgt tttccga
//
LOCUS       DATIRS010000021         1832 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1673790, whole genome shotgun sequence.
ACCESSION   DATIRS010000021 DATIRS010000000
VERSION     DATIRS010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1832)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1832)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1832
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1673790"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..335
                     /locus_tag="VLM90_00250"
     CDS             <1..335
                     /locus_tag="VLM90_00250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11410.1"
                     /translation="EEFEPHQFKEGVNLSSAFGSLALMNRAPHPNAAKVFINWLLSRE
                     GQTLFQKTISIPGDARNSRRVDVPKDHVPASHARRDKMAYFDTDDPDTKDLTPLYKLL
                     DEVLPVKK"
     gene            354..1496
                     /locus_tag="VLM90_00255"
     CDS             354..1496
                     /locus_tag="VLM90_00255"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ11411.1"
                     /translation="MLKAKGFIVWSMATCAVALSLVRPSIAAESKPAGQADWDKTVAA
                     ARKEGRLNFYVGRYGSEKLLNEFRKEFPEIRIVSTNGAGNSLGTRIVAEARSGAMVAD
                     LYSGGAVTNFEILYKGKVLDSIKSALITPEVLDESKWYGGKHRYNDPEQQHVFIYIAN
                     PTSASLYFNTNMVNPKEFKSFWDLVQPKWKGKFVSQEPTGTGIGPSLQFFYYHPELGP
                     EFLRKLFVDQQPVYSKDRRQMTDWLAQGKFALCMGCRDSEKANKQGLPVDDLDMVDWK
                     EGAHVSSGGGSLGLIKGAPHPNAAKLFINWFLSRRGQIALQTYEDLYGEDPPNSRRID
                     IPKDALPATSRLVEGRRYFDFSDAKHSDMTPIYQLTKEFMKGREGK"
     gene            1499..>1832
                     /locus_tag="VLM90_00260"
     CDS             1499..>1832
                     /locus_tag="VLM90_00260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11412.1"
                     /translation="MIAVQLIILILAGLGWVPSGIAADAKPVWQASWEKTVAAAKKEG
                     KLNFYVGRYGSEPLLNEFRKEFPEIKLVTVNGAGNTLGTRIITETRAGHVLADLFSGG
                     ANTNYEVLY"
BASE COUNT          418 a          505 c          535 g          374 t
ORIGIN      
        1 tggaagaatt cgaaccgcac cagtttaagg aaggcgtgaa tttgtcatcg gcgttcggct
       61 ccctggcgct gatgaaccgc gcgcctcatc ctaatgcggc caaggttttc atcaattggc
      121 tgctgtctcg cgaaggccag acgctgtttc aaaaaaccat cagcattccc ggcgacgcac
      181 gcaactcacg gcgcgtcgac gtgcccaagg atcacgtgcc ggccagtcac gcgcggcgcg
      241 acaagatggc ctatttcgac accgatgacc ccgataccaa ggatctgacg ccgctctata
      301 aattgctcga cgaagtgctg ccggtgaaga aataaccggc ttggagagac agtatgctta
      361 aggcaaaagg attcatcgtt tggagcatgg caacttgcgc cgtggcattg tcgctcgtac
      421 ggccctcaat cgccgccgag agcaaaccgg cggggcaagc tgactgggat aagacggtcg
      481 ccgccgccag gaaagaaggg cggctcaact tctatgtcgg ccgctatggc agtgagaaat
      541 tgttgaacga gtttcgcaag gaattccccg agatcaggat cgtcagcacc aacggcgccg
      601 gcaattcgct gggcacgcgg attgtcgccg aggcgcgctc gggcgccatg gtcgccgatc
      661 tctatagcgg cggcgctgtg accaattttg agattctcta caaaggcaag gtgctcgact
      721 cgatcaagtc ggcgttgatc acgccggagg tgctcgacga gtccaaatgg tacggcggca
      781 agcaccgcta caacgacccg gaacagcagc atgtgtttat ctacatcgcc aatccgactt
      841 cggcgagtct ttatttcaac accaatatgg tcaatcccaa ggagttcaaa tcgttctggg
      901 atttggtcca acccaagtgg aaaggcaaat tcgtctccca agagcccacc ggcaccggca
      961 tcgggccgtc gctgcaattt ttctactatc acccggagct cgggccggag tttttgcgca
     1021 agctgtttgt cgatcagcag ccggtctatt cgaaagaccg ccgccaaatg accgattggc
     1081 tggcccaggg aaagttcgcg ttgtgcatgg gctgccggga ttcggagaag gccaacaagc
     1141 agggactgcc ggtggatgat ctggacatgg tcgattggaa ggaaggcgct catgtttcgt
     1201 ccggcggcgg ttctctcggt ttgatcaaag gcgcgccgca tcccaacgcc gccaagctat
     1261 tcatcaactg gtttttgtcg cggcgcgggc aaatcgccct gcaaacatac gaggatctct
     1321 acggcgaaga cccgcccaac tcgcggcgca tcgatattcc caaagatgct cttccggcga
     1381 cgagcaggct cgtggaaggg cggcgctact tcgacttctc cgacgccaag cattccgata
     1441 tgacgccgat ctatcaattg accaaggaat tcatgaaagg gcgtgaggga aaataaatat
     1501 gatagctgtt cagttgatca ttctgattct cgctggcctt ggctgggtgc cgtctggtat
     1561 tgccgccgat gccaaaccgg tctggcaggc gagttgggag aaaaccgtcg ccgcggcaaa
     1621 gaaagagggc aagctcaact tctatgtcgg gcgttacggt agcgagccgt tgctgaacga
     1681 gttccgcaag gaatttcccg agatcaaact ggtcacggtg aatggcgccg gtaatacgtt
     1741 gggcacgaga atcataaccg agacccgtgc cggccatgtg ctcgccgatc tgttcagcgg
     1801 tggggcgaat accaattacg aagtgctcta tg
//
LOCUS       DATIRS010000022         2020 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1870358, whole genome shotgun sequence.
ACCESSION   DATIRS010000022 DATIRS010000000
VERSION     DATIRS010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2020
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1870358"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1793)
                     /gene="aspS"
                     /locus_tag="VLM90_00265"
     CDS             complement(<1..1793)
                     /gene="aspS"
                     /locus_tag="VLM90_00265"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: protein motif:HMM:NF001750.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HSQ11413.1"
                     /translation="MAERVFNDQLGDWQRSCYCGEARASSVDQELTLVGWVHGRRDHG
                     GVIFVDLRDRSGICQIVFNPEGDAASHEKAKQLRSEDVIAVRGILAKRSLENINPELP
                     TGEVELKSRGLRLLNASQVPPFIIDDETDANENTRLKYRYLDLRRPQSLAPLLLRYRM
                     TKLIRDYLDGLGFIDVETPVLTKSTPEGARDYLVPSRIYHGKFYALPQSPQLFKQILM
                     VGGLDRYFQIVKCFRDEDLRADRQPEFTQLDMELSFVQPDEVMDIVEGMISLLFKELK
                     GIELKRPFAKLTYEDAMNRFGSDKPDMRFGLELSDFSDALRNCQAKVFTGAMQKGGVV
                     KGMRIPNGGAMSRKDLDDMTPFVATFGAKGVAWTKITAEGWQSPIAKFLSDAEQKEVE
                     RICQAQVGDVVLFSADSAKIVHDSLGNLRLHLGEKLGLIPAKDYALVWVVDFPLMEYD
                     AEEKRYVALHHPFTAPLDEDLHLLDSEPAKARSKAYDLAMNGTEVGGGSIRIHQVELQ
                     KKVLGLMGIDAEEAQAKFGFLLEALSFGAPPHGGIAFGIDRLAMLLSGAKSLRDVIAF
                     PKSQRAVCMLTDAPSEVAPRQLRELGIRVSA"
     gene            complement(1793..>2020)
                     /locus_tag="VLM90_00270"
     CDS             complement(1793..>2020)
                     /locus_tag="VLM90_00270"
                     /inference="COORDINATES: protein motif:HMM:NF015113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="His/Gly/Thr/Pro-type tRNA ligase C-terminal
                     domain-containing protein"
                     /protein_id="HSQ11414.1"
                     /translation="HRLRQQGIGVEIEAETRSLKSQMRRAYKLKARSVVILGDDELAK
                     GQAVLRDMTHKQQEEISLDNFESALTARKAN"
BASE COUNT          420 a          606 c          559 g          435 t
ORIGIN      
        1 atagcgctga cccgtatgcc caactcgcgc agttgccgtg gcgccacttc ggagggcgcg
       61 tcggtaagca tacagacggc ccgctggctt ttcgggaagg cgatgacgtc gcgcaacgac
      121 ttggcgccgc tcaaaagcat cgccaagcga tcgatgccga aagcgatacc gccatgaggc
      181 ggcgcgccga agctcaacgc ttcgagcaag aaaccgaact tggcctgcgc ctcttcggcg
      241 tcaatgccca tgaggccgag aacttttttt tgtaactcga cttgatgaat acggatgctg
      301 ccgccgccga cttcggtgcc attcatcgct aagtcgtagg ccttggagcg ggctttggcc
      361 ggctcgctgt cgagcagatg caggtcttcg tccaaaggcg cggtgaacgg atgatgcaag
      421 gcgacgtatc gtttctcctc cgcgtcatat tccatcagcg ggaagtccac cacccagacc
      481 agtgcgtaat ctttggccgg gatcagcccg agcttttcgc ccagatgcaa acgcaagttg
      541 cccagtgaat catggacgat cttggcgctg tcggcggaga aaagcacgac atcgccgacc
      601 tgcgcctggc aaattctttc gacttctttt tgctccgcgt cggacaaaaa cttggcgatg
      661 ggcgactgcc aaccctcagc ggtaatcttc gtccatgcga cgcccttggc gccgaaggtc
      721 gccacgaagg gcgtcatgtc gtccaaatcc ttgcgcgaca tggcgccgcc attgggaata
      781 cgcatgcctt tgaccacacc gcccttttgc atcgcgccgg tgaagacctt ggcctggcag
      841 ttacgcagcg catcgctaaa atcgctgagc tctaaaccga agcgcatgtc cggcttgtcc
      901 gacccgaagc gattcatcgc gtcttcatag gtcagcttgg cgaagggccg cttaagctcg
      961 attcccttca gttctttgaa caagagcgag atcataccct cgacaatgtc catgacctcg
     1021 tccggttgaa caaacgacag ctccatatcg agctgggtga actccggctg gcggtcggcg
     1081 cgcaaatctt cgtcgcgaaa acatttgacg atctgaaaat agcgatccag gccgccgacc
     1141 atcaagatct gcttgaacaa ctgcggcgac tgcggcaacg cgtaaaactt gccatgatag
     1201 atgcggctcg gcacgagata atcgcgcgcc ccctccggtg tgctcttggt cagcaccggc
     1261 gtctcgacgt cgataaaacc caagccgtcg agataatcgc ggatcagctt ggtcatgcgg
     1321 tagcgcaaga gcagcggtgc caggctctgg ggccggcgca ggtccaggta gcgatacttg
     1381 agccgggtgt tttcattggc gtcggtttca tcgtcgatga tgaacggcgg cacctgggaa
     1441 gcgttgagca ggcgcaggcc gcggctcttc aattccactt caccggtggg cagttccgga
     1501 ttgatgtttt ctagcgaccg cttggcaagg atgccgcgca cggcgatgac atcttcggaa
     1561 cggagttgtt tggctttctc gtgcgaagcc gcatcgcctt cgggattgaa gacgatctga
     1621 caaatgccgc tgcgatcacg taaatcgacg aagatcacgc caccatgatc gcgccggcca
     1681 tgcacccaac cgaccaaagt caattcttgg tccaccgacg acgcccgcgc ttcgccgcaa
     1741 taacaactgc gctgccaatc gcccaactga tcgttaaaaa ctcgctccgc catcaatttg
     1801 ccttcctagc cgtcaacgct gattcaaaat tgtccagcga gatttcttct tgttgtttat
     1861 gggtcatatc gcgcagtacc gcttgcccct tggcgagttc atcgtcgccg aggatcacca
     1921 ccgaacgggc tttaagttta taggcccggc gcatttgact ttttaagctg cgagtctcgg
     1981 cttcgatctc gacgccaatg ccctgctggc gtagtctatg
//
LOCUS       DATIRS010000023         2505 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1870394, whole genome shotgun sequence.
ACCESSION   DATIRS010000023 DATIRS010000000
VERSION     DATIRS010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2505
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1870394"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(182..1222)
                     /locus_tag="VLM90_00275"
     CDS             complement(182..1222)
                     /locus_tag="VLM90_00275"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ11415.1"
                     /translation="MNASYAPIDADGHVMETDDELRRYLPAPFEGRRALTALFPSLDG
                     WPRSTRKAPDPTPCLERWRMFLNASGVAGSVLYPTMGLAMAHIKDVQWATVMARCYND
                     YLYGEYLAQEPERLWGVALLPIQDVAAAADELERCVKDLRMVGGVIPAVGLSKGLGHP
                     MYDPLYRTAVRLNVPLAVHGGSSAGLGLDILDSFVKILVLEHAVAQQIHFTSFLLDGG
                     PVRFPDLKIAFLEAGVGWVPYLMERLDEKYEKLPHQAPLLTKAPSEYVRDGSIYFSCE
                     LEEKILSYVIGLGLEKQIMYPSDFPHERPTLEQFLADIPHFQAREDLSAPVKKLILRD
                     NCIDFYSLNLAK"
     gene            complement(1235..2221)
                     /locus_tag="VLM90_00280"
     CDS             complement(1235..2221)
                     /locus_tag="VLM90_00280"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ11416.1"
                     /translation="MKPVSRYFLCLVLCWHMQGANASAEPLAVGYSAVSSVFLPFWIG
                     KEAGFYKKEGLDAQLVYIASSTTMAQAMFARQVAISSVNSGSVVTSTLQGGDLVLMGA
                     VMNVAGFYIMTRPEIANVQELRGKKIGVTRLGSSSDFAVREYLQRNKLNPSRDVNIVQ
                     IGGMPELAAALNNGSISAAPLSAPSFHIAEQRGNRIIANLANEGIYFVIAGLTTTRRY
                     LREQRGEAKAFLRAFGRATHFMFQQKDEAKKLLTKYAKIDDAGMLEGSMKYAYDFTEK
                     IPLVKREGVQVVLDQEAAKIPQAKDFTAERFYDNGLVQELINEGFYKSLWGK"
     gene            2262..>2505
                     /locus_tag="VLM90_00285"
     CDS             2262..>2505
                     /locus_tag="VLM90_00285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11417.1"
                     /translation="MSIWQLPFSAHSHDGFGFRLFVARPAFSRAKDSSATLEHFIERS
                     LPRNFCWCVAVLSLTTLLEITETYKLFARSFSDENLI"
BASE COUNT          530 a          738 c          680 g          557 t
ORIGIN      
        1 acaacatcac cctgtcggtg gtcatctgga gcttttggag ctccggccag catggaccgt
       61 cggccgccat gagcctagtg atgattttac tgatgcttcc ggtaatgatc ctctactggc
      121 gcgtcggcaa tcgcgtcggc gagtcgttgt ccggcaccag agaatgaatt ctgcgaggtg
      181 gctacttcgc caaattcaac gagtaaaaat cgatgcagtt gtcgcgcaga attaatttct
      241 ttaccggtgc cgacagatcc tcgcgcgctt gaaagtgcgg aatgtcggcg aggaactgtt
      301 cgagggtcgg ccgctcgtgc gggaagtccg acggatacat gatttgtttt tccaagccca
      361 ggccgatgac ataggaaaga attttttctt ctagctcgca ggaaaaatag atcgagccgt
      421 cccggacata ttcgctcggc gctttggtca ggagcggcgc ctggtgcggc agcttctcat
      481 atttttcgtc gagtcgttcc atcaaataag gcacccagcc cacgccggct tcgaggaaag
      541 cgattttaag atcgggaaaa cgcaccggtc cgccgtcgag cagaaaactg gtaaaatgaa
      601 tctgctgcgc cacagcgtgt tcaaggacga gaatcttcac gaacgaatca agaatatcca
      661 ggccaagacc cgcgctcgat ccgccatgca ccgccagcgg cacgttcaac cgcacagcgg
      721 ttcgatagag cggatcgtac atcggatggc cgagcccttt cgacaaaccg acggcaggaa
      781 tcaccccgcc gaccattcgc aaatccttga cgcaacgttc aagttcgtcg gctgccgctg
      841 cgacatcttg tatcggcagc aaagccacgc cccacagccg ctctggctcc tgggcgagat
      901 attcgccgta aagatagtcg ttgtaacagc gcgccatcac cgtcgcccat tggacgtctt
      961 tgatatgcgc catggccaga cccatggtcg gatagagcac cgagcccgcc acgccggagg
     1021 cattcagaaa catccgccac ctttctaaac aaggcgttgg gtccggcgcc ttgcgcgtgc
     1081 tgcgcggcca gccgtcgagg gatggaaaca gcgcggttag cgcgcgccgc ccctcgaacg
     1141 gcgccggtaa atagcggcgc agttcgtcgt cggtctccat cacatggccg tcggcatcga
     1201 tcggtgcata acttgcgttc atccaaactc cctttcactt accccaaagc gatttgtaga
     1261 acccttcgtt gataagctct tgcaccaaac cgttgtcgta aaaacgctcg gcggtgaaat
     1321 ccttcgcctg gggaatcttc gccgcctctt gatcgagcac cacttgcacg ccctcgcgct
     1381 tcactagggg aatcttctcg gtaaagtcat aggcgtattt catgctgcct tcgagcatgc
     1441 cggcgtcatc gatcttggca tatttggtca agagcttttt cgcctcgtcc ttttgttgaa
     1501 acatgaagtg ggtggcgcgg ccgaaggcgc gcagaaaagc tttggcttcg ccgcgttgct
     1561 cgcgcagata gcggcgcgtc gtcgtcagtc cggcgatgac aaagtaaatt ccttcgttag
     1621 cgaggttggc gatgatccgg ttaccccgtt gttcggcgat atggaaactc ggcgccgaca
     1681 acggcgccgc gctgatcgag ccattgttca atgccgcggc caattccggc atgccgccga
     1741 tctggacgat gttgacgtca cggctgggat tcagcttatt tctttgcaga tattcgcgca
     1801 cggcgaaatc cgaagacgag cctaagcgcg tcacgccgat tttcttgccg cgcagctcct
     1861 gaacattggc gatctccggc cgagtcatga tgtaaaatcc ggccacattc atcaccgcgc
     1921 ccatgaggac cagatcgccg ccctgaagcg tgctggtgac gacactgccg ctgttaaccg
     1981 aagagatcgc cacctggcgg gcaaacatcg cttgcgccat ggtggtcgag ctggcgatgt
     2041 agacgagctg cgcgtcgagg ccttccttct tgtaaaagcc cgcttctttg ccgatccaga
     2101 acggcaagaa caccgaactc accgccgagt agccgaccgc cagtggttcg gcagacgcat
     2161 ttgccccctg catgtgccag cacaacacca ggcacaagaa ataccgtgaa acaggcttca
     2221 tgatcgtcgc ccctttccgt tgagcgcacg ctaatcggaa tttgtcgatt tggcaattac
     2281 ctttcagcgc ccactcccac gacggtttcg gctttcggct gtttgtcgcg cggccggctt
     2341 tttccagggc taaggattcg tcggcgacgc tggaacattt tatcgagcgt tcgctgccac
     2401 ggaatttttg ttggtgtgtt gccgtcctca gcttaaccac gctgcttgaa atcaccgaaa
     2461 cctataaact gttcgctcga tcgtttagtg atgaaaacct gatca
//
LOCUS       DATIRS010000024         1525 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_395716, whole genome shotgun sequence.
ACCESSION   DATIRS010000024 DATIRS010000000
VERSION     DATIRS010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1525
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_395716"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            179..1279
                     /locus_tag="VLM90_00290"
     CDS             179..1279
                     /locus_tag="VLM90_00290"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ11418.1"
                     /translation="MSENGIRIIDVDGHVREADDLFEKYLEPAFRARAPKVEKVPNGQ
                     LLFRLEGERHHRRPDETPFRLKNDGSPVNEHRQLATDPKDRLKAMDRDGIERGLLFPS
                     AGLYLPSVQEDAYAAALCRAYNNWLYDYCAADRRRLMGVGVIPVQDVQLAIDEAKRAV
                     NELGCKGIFVRPNPVKGRNIDDPYYDPLYKTVVELGVPLLVHEGSGAFLPTAGADRFA
                     GQWFFTHTISHPLEQMLASLSLICRGALERHPELQCGFLESGAGWLPYWLWRMDEHYE
                     VLPFQVPWLKMKPSDYFRRQCFVSFEADETRLGEVISSIGADHVVFASDYPHWDATFP
                     GVTDMIMNRKDLDADTQRKIMGANAAKLLKLD"
BASE COUNT          325 a          467 c          433 g          300 t
ORIGIN      
        1 atgaagaggt cgcgctggaa tcccatgcta tctatgcacg cctgctgatc gaggacgcgc
       61 gaccgttggc cgatgccgtc aagaccgtgc tcgagcagca gggaaaaccc gacctgccgt
      121 tggatcgcgt cgtcgactcc agcatcgtcg aggaagttct gcgtgaacgg agatagtcat
      181 gtctgagaac ggaatccgaa tcatcgatgt cgacggccac gtgcgcgaag ccgacgactt
      241 gttcgagaaa tatttagagc cggcttttcg cgcccgagcg ccgaaggtcg aaaaagtgcc
      301 caacggccag ttgctgtttc gtctggaggg tgagcgccat caccgccgcc ccgatgaaac
      361 tccgtttcgc ctcaaaaacg acggctcgcc cgtcaacgag caccgccaac tcgcgaccga
      421 ccccaaagac cggcttaaag ccatggaccg cgacggcatc gagcgcggcc tgctgtttcc
      481 gtcagcagga ttgtatctgc cgtcggtaca agaagacgcc tacgccgcgg cgctctgccg
      541 ggcgtataac aattggctct acgattattg cgcggcggat cgcagacgcc tgatgggcgt
      601 gggcgtgatt ccagtacaag acgtgcagct cgccatcgac gaagccaagc gcgccgtcaa
      661 cgaactcggc tgcaaaggca tcttcgtgcg gccaaatccg gtgaaaggcc gcaacatcga
      721 cgatccttat tacgacccgc tctacaaaac cgtcgtcgag ctcggcgtgc cgctgctggt
      781 gcacgaggga tcaggagcat ttctgcccac cgccggcgcc gaccggttcg ccggccagtg
      841 gtttttcacc cacacgattt cccatccgtt ggagcagatg ctcgccagcc taagtttgat
      901 ctgccgcggt gccctggaac gccatcctga attgcagtgc gggtttctcg aatccggcgc
      961 cggctggctg ccctactggc tgtggcgcat ggacgagcac tacgaagtgc tgccgtttca
     1021 agtgccctgg ttgaagatga aaccgagcga ctactttcgc cgccaatgct tcgtctcgtt
     1081 cgaagccgac gaaacccgcc tgggtgaagt gatctcgtcc atcggcgccg atcatgtcgt
     1141 gttcgcctcc gactatcccc actgggacgc gacctttccc ggcgttaccg acatgatcat
     1201 gaaccgcaaa gatctcgacg ccgataccca gcgtaaaatc atgggagcca atgccgcgaa
     1261 gttgctgaag ttagattaac tgtaacggtt acgcgtgggg ggctttgggt tcctcttggg
     1321 aacctcgaaa ccgcaaaccc gtgacccgaa accaaaaacc ggaggattta tggccgacgt
     1381 tccgaaactc gtttccgcaa tgggccgcgc cgagctcgac aagatctacg tgcgcaacta
     1441 cgatttgaat aaagagctgc tcggcaagat cagcttctca caaatggtct gtttgatgct
     1501 ccagggccgc ttgcccactg ccgat
//
LOCUS       DATIRS010000025         3026 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_887601, whole genome shotgun sequence.
ACCESSION   DATIRS010000025 DATIRS010000000
VERSION     DATIRS010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3026
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_887601"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2292
                     /gene="polA"
                     /locus_tag="VLM90_00295"
     CDS             <1..2292
                     /gene="polA"
                     /locus_tag="VLM90_00295"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HSQ11419.1"
                     /translation="LEGYEADDLLATLTKHAREEGCDVTVVTGDRDILQLVRDGVAVI
                     MTRRGISDVIRYDVPTVVERYGVTPEKWIDFVALKGEAADNLPGVPGVGDKTAAQLIN
                     KYGDIEQVIGHADELTPKLREAVKNHASQVRINKELGHLLDDVRLDLDPAKLRLEAWD
                     EEAVRSLFHSLELRSLHERLKALKFHGDAASPALKLSSTSELTSASDLRPGETLAIAW
                     NDDWLAVSDADGEARILPLSDAIPRLADAFKDPNRQKIAHDAKGLFRSALDAGVEIEA
                     LNCDTKIAAYLLEPGSSSGYELRDTVSRYLGVSLDREKSEPQAGEQTTLSFATDDKHS
                     VCLRAVAVRAVAPVVEEKLRAQGAWELATTLEFPLIPVLARMEHAGILVDRDYLYNLN
                     ADFGQKMTALEQTIQQLAGEQFNVNSNLQLQRILFDKLALPKTRKIKTGYSTDAAELE
                     KLAGRHSIVASLLEYREVSKLKNGFSEMLLGLIDPKSRRIHTTYEQTTAATGRLSSSA
                     PNLQNIPIRGDLGRQIRRAFVAPPGQVLLSADYSQIELRVLAHLSADETFCQAFAQGH
                     DFHATIAARVYDVGLSNVTSEMRNKVKQFSYGIAYGMSTYGVSQRLGVEMDEAATFVE
                     TYYAQFPKVKEFLAAQVEKAKVDGFTTTLFGRRRYLPELQSSNFRLRALGERMALNAP
                     IQGSAADILKKAMINVDTALRKQQIAKMLLTVHDELVFEVLAGSVSEARALIEREMTQ
                     AADLRCGLAVEVHSGANWAEAHA"
     gene            2420..>3026
                     /locus_tag="VLM90_00300"
     CDS             2420..>3026
                     /locus_tag="VLM90_00300"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSQ11420.1"
                     /translation="MINKFDTIVCGLGAMGSAALYQMAKRAKKVLGLDQFSPPHDNGS
                     SHGESRIIRQAIGEGEEYVPLALRSYELWREIEKATGWEILTITGGLTLESQNSAAVM
                     HGRRDFLDQAFRCAKKFNIRHEILDTADIRKRYPQFAVTDERAYFEYETGFLRPNLCI
                     EAQLHLARQHGAVVQTQETIVSVASGADSGVTVTTSRGAYCA"
BASE COUNT          681 a          892 c          875 g          578 t
ORIGIN      
        1 ctggaaggct atgaggccga cgacctgctg gcgaccttga ccaagcatgc gcgcgaagaa
       61 ggttgcgatg tgactgtcgt caccggcgac cgcgatatcc ttcaactagt tcgcgacggc
      121 gtcgccgtca tcatgacccg gcgcggcatt tccgacgtga tccgctacga cgtgccgacc
      181 gtagtcgagc gctacggcgt aacacctgag aagtggatcg atttcgtcgc gctcaagggt
      241 gaagccgcgg acaacctacc gggagtgccc ggcgtgggcg acaagaccgc agctcagctc
      301 atcaataaat acggcgatat cgagcaggtc atcggtcatg ccgacgagct gacaccgaaa
      361 ctccgcgaag cggtcaagaa ccacgccagt caggttcgga tcaataaaga gctgggccat
      421 ctgctcgacg acgtgcgact cgatctcgat ccggcgaaac tccgcctcga agcgtgggac
      481 gaggaagcgg tgcgcagcct ctttcactcg cttgagcttc gcagcctgca cgagcgactc
      541 aaggcgctca agtttcatgg tgacgcggca tcgccggcgc tcaagcttag ctcgacttcg
      601 gagttgactt cggcgagtga tctacgcccg ggggaaacgc tcgcgattgc ttggaatgat
      661 gattggcttg ccgtgagcga tgcggacgga gaagcgcgta ttttgccatt gagcgatgcc
      721 atacccaggc ttgccgatgc tttcaaagat cctaaccggc aaaaaatcgc tcatgacgcc
      781 aaaggacttt tccgttccgc cctcgacgcc ggggtcgaaa tcgaagcctt aaattgcgat
      841 accaagatcg ctgcctatct cctcgaaccc ggttcctcgt cagggtacga gcttcgcgat
      901 accgtgagtc gttatctagg cgttagcctg gatagggaga agagcgagcc gcaagcgggt
      961 gagcaaacca ccctgtcttt tgcaaccgac gacaagcaca gtgtttgtct gagggccgtg
     1021 gcggtaagag ctgtagcgcc ggtcgtcgag gagaaactcc gcgcgcaagg cgcctgggag
     1081 cttgccacga ccctggagtt tcccctgatc ccggtgctgg cgcgcatgga gcacgccgga
     1141 attcttgtcg atcgcgacta tctctataac ctgaatgctg acttcggcca gaagatgaca
     1201 gccctagagc agacgattca acagctcgcc ggcgaacaat tcaacgtcaa ctccaacctg
     1261 cagctgcagc gcattctttt cgacaaactg gcgttgccga aaaccagaaa aatcaaaacc
     1321 ggttactcca cggacgcggc tgagttggag aagctcgccg gtcgccattc gatcgtcgcc
     1381 tcactgctcg aataccgcga ggtatcaaag ctcaaaaatg gcttcagcga gatgctcctc
     1441 ggactcatcg atccgaagag ccggcgcatc catacgacct acgagcaaac cacggcggcc
     1501 accggacgct tgtcatcgag cgcgcccaac ttgcaaaaca ttcccattcg cggcgatctc
     1561 ggccggcaaa tccgccgcgc tttcgtcgcg ccgccggggc aggttttgct gtcggccgat
     1621 tattcccaga tcgagctgcg cgtgctcgcg catctttccg cagacgagac gttttgccag
     1681 gcattcgcgc agggtcacga ctttcacgcg accatcgcgg cgagagtcta tgacgtcgga
     1741 ttgagcaacg tcacttcgga gatgcgcaat aaggtcaagc aattttccta cggcatcgct
     1801 tacggcatgt cgacctacgg cgtctcgcag cggctcggcg tcgaaatgga cgaagcggcc
     1861 actttcgtcg aaacctacta cgcgcaattt ccgaaagtga aagagtttct cgccgcgcag
     1921 gtggagaaag cgaaagtcga cggctttacc acgaccctgt tcggccgtcg ccgctatctg
     1981 ccggagttgc aatcgtcaaa ctttcggctg cgcgcattgg gcgagcgcat ggcgctcaac
     2041 gcgccgatcc agggcagcgc cgccgacatt ctcaagaaag cgatgatcaa cgtcgacacc
     2101 gcattgcgca aacagcagat cgccaaaatg ctgctgacgg ttcacgacga gctggttttc
     2161 gaagtgctag cgggcagcgt cagtgaggcg cgcgcattga tcgagagaga aatgactcaa
     2221 gccgccgacc tgcgctgcgg cttggccgtg gaagtgcaca gcggcgccaa ttgggccgaa
     2281 gcgcacgcgt gaactgactg gtgctggttc aaaacgttca agccgatcaa ccgcttcgct
     2341 ccgttcaagc cgtgtgacgg atcacggaac acgaatacct ccggaacccg atcggtgtcg
     2401 cgggccgaaa aacatagtaa tgatcaataa gttcgacacg atcgtatgcg gtctcggcgc
     2461 gatgggaagc gctgcgcttt accaaatggc caaacgggcg aagaaagtgc ttggcctcga
     2521 tcagttttcc ccgccccatg ataacggctc atctcacggc gagagtcgga ttattcgcca
     2581 agcgattgga gaaggcgagg agtatgtgcc cttggcgttg cgctcctatg aattgtggcg
     2641 cgagatcgaa aaagccaccg gctgggagat cctgacgatc acgggcggcc tgaccctgga
     2701 gagtcaaaac agcgcggccg tcatgcacgg ccggcgtgat tttttagacc aagccttccg
     2761 ctgtgcaaag aagttcaata tccgccatga aatcctcgac accgcggaca taagaaagcg
     2821 ctatccgcag ttcgccgtaa ccgatgagcg cgcttacttt gaatacgaaa cgggatttct
     2881 acggccaaac ctttgcatcg aggcccaact gcatcttgcg cgccagcatg gcgcagttgt
     2941 tcaaactcaa gagaccattg tgtcagtcgc aagcggcgcg gactccggag taacggtcac
     3001 gaccagccgc ggcgcctatt gtgccg
//
LOCUS       DATIRS010000026         1523 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1575909, whole genome shotgun sequence.
ACCESSION   DATIRS010000026 DATIRS010000000
VERSION     DATIRS010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1523
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1575909"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1447
                     /locus_tag="VLM90_00305"
     CDS             <1..1447
                     /locus_tag="VLM90_00305"
                     /inference="COORDINATES: protein motif:HMM:NF004801.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="chlorohydrolase family protein"
                     /protein_id="HSQ11421.1"
                     /translation="VMKTLIQGGYVVGFDGKEHEIIKDGVVVFDGNRIEFVGKEYAQP
                     VDKMVDAKGCLVSPGFIDTHFHSGINASDYILNDSTKTDFFASNYLAHGGPTREGAHS
                     AHLKDVDIGQRYSLIHVLKSGVTTTFDIGGAGGEPERYVDMIDRVGIRCVAGPSYKNV
                     SFFHDREGRLEYDWDDERGSKGLKTAVDFAKKFNGACSGRMTAMLFPGHVDSCTPALL
                     KDTKKAAKETGVGIQIHATINLFEFHTVMQRERCTTIELLKKIGFLDPETSLSHCIFV
                     SGHSWLAYPYGDDLKIIADSGASVAYSPLKYLKLGIVMESFDKYRQAGINMGIGTDTF
                     PKDILSDMRYAALASRVADKSFLSGHPRDVFNAITLGGAKMFGRDDLGRLQKGAKADI
                     TIVNLRDLAFGAVRDPIRSLMETAVSRDVRTVIVDGETLVDNGKYLRLDEQELLEKVQ
                     AKGEQVWDSVSKWHWTGKNIDEVVPPSFRMK"
BASE COUNT          348 a          443 c          429 g          303 t
ORIGIN      
        1 cgtgatgaaa acactcatcc agggcggcta cgttgtcggc ttcgacggca aggaacacga
       61 gatcatcaaa gacggcgtcg tcgtattcga cggcaaccgc atcgagttcg tcggcaagga
      121 gtatgcccaa ccggtcgaca agatggtcga cgccaaaggc tgcctggttt ctcccggctt
      181 tatcgatacg cactttcact ccggtatcaa cgcaagcgat tatatactca acgactccac
      241 caagactgat tttttcgctt cgaattatct cgctcacggc gggccgacgc gcgaaggtgc
      301 gcactcggcg cacttgaagg atgtcgacat tggacaacgc tattcgttaa tccatgtgct
      361 caagagcggc gtgacgacga cgttcgacat tggcggcgcc ggcggcgagc cggaacgata
      421 cgtcgacatg atcgatcggg tcggcatccg ttgcgtcgcc ggaccgagct acaaaaacgt
      481 cagcttcttt cacgaccgag agggtcgttt ggaatatgac tgggacgacg agcgcggcag
      541 caaagggctg aaaaccgccg tcgacttcgc caagaaattc aacggcgcgt gcagcggccg
      601 catgaccgcg atgctcttcc ccggccacgt cgactcgtgc actccggcat tgctgaagga
      661 cacgaagaag gcggccaaag aaaccggcgt ggggattcag attcacgcga cgatcaatct
      721 gtttgaattc catacggtta tgcagcgcga acggtgcacc actatcgagc tgctcaagaa
      781 gatcggcttt ctcgatcccg aaacgtctct gtcgcactgt atcttcgtca gcggccatag
      841 ttggctggcg tatccctacg gcgacgatct caagattatc gccgactcag gcgcttccgt
      901 cgcttacagt ccgctcaaat atttaaagct cggcatcgtc atggagtctt tcgacaagta
      961 tcgccaggcc ggtatcaaca tgggcatcgg cacggacact tttcccaagg atattctctc
     1021 cgacatgcgc tacgcggcgc tcgcatcgcg cgtcgccgac aagagctttc tctccggcca
     1081 cccgcgcgac gttttcaacg cgatcacgct cggcggcgcg aagatgttcg gccgcgacga
     1141 cttgggccgg ctgcaaaaag gcgcaaaggc cgatatcacc atcgtcaatc tgcgcgacct
     1201 ggccttcggc gccgtgcgcg acccgatccg ctcgctgatg gaaaccgccg tcagccgcga
     1261 tgtgcgcacc gttatcgtcg acggcgaaac cctcgtcgac aacggcaagt atctgcgcct
     1321 ggacgagcag gaactgctgg aaaaggttca agccaaaggc gagcaagtct gggacagcgt
     1381 gtccaaatgg cattggacgg ggaagaatat cgatgaggtt gtgccgccga gtttcaggat
     1441 gaagtaaatc gattcgtaag caaacgagac tgtgagtcaa ttggtctcac agacccttct
     1501 gagactcgct acaaggcctt taa
//
LOCUS       DATIRS010000027         1630 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_101095, whole genome shotgun sequence.
ACCESSION   DATIRS010000027 DATIRS010000000
VERSION     DATIRS010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1630
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101095"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..908
                     /locus_tag="VLM90_00310"
     CDS             <1..908
                     /locus_tag="VLM90_00310"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ11422.1"
                     /translation="FYTGFSKLTGIKLNRIEGGEDALFERIKAEGAASPADVFLTVDV
                     ARLWRAEQAGIFAPLKSELLAKRIPAHFRDPNGNWFGFSSRVRVIAYDRRKVSPGDVA
                     RYEQLADPKWKSEICTRPSSHPYNLSLISSMILHLGEDKARDWARGVATNLARPPRGG
                     DTDQLTAVGVGECSIALSNHYYYVRLMRSTKPEDRALVEKVHIVWPNQNDRGAHVNIS
                     GGGILKNAPHRDAAVKFLEYLASDTAQAYFADGNNEWPTVKGVKLANPQLETFGRFRT
                     DALPLANLGKTQAAAQRLADQVGWK"
     gene            942..>1630
                     /locus_tag="VLM90_00315"
     CDS             942..>1630
                     /locus_tag="VLM90_00315"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSQ11423.1"
                     /translation="MTTIAAALRSKTISGLTVPRIGGLGVVSLITAALVVAPIAAVVW
                     NIFLPSEATWAHLIATVLPEYIATTFLLLVLVAAGVVCCGVLSAWLVTAYEFPGRRVL
                     EWALVLPMAIPAYVMAYAYTDWLQTSGPVQSMLREFTGWRVREYWFPEIRSLPGAATM
                     LSLALYPYVYLLTRSAFLEQSRSSYEAAQLAGYGAWGRFWRVSLPLARTGIVAGVALA
                     LMETLADFGTVS"
BASE COUNT          305 a          500 c          483 g          342 t
ORIGIN      
        1 ctttttacac cggctttagc aaactcaccg gcatcaagct caatcgcatc gaaggcggcg
       61 aagacgcgct atttgaacgt atcaaggccg aaggggccgc tagtccggcg gatgttttct
      121 tgaccgtcga tgtcgcccgg ctgtggcgcg cggagcaggc gggcatcttc gcgccgctca
      181 agtcggaact gctggctaag cgcatccccg ctcactttcg cgatccaaat ggcaactggt
      241 tcggcttctc atcccgtgtt cgggttatcg cctatgatcg gcgcaaggtc agccccggcg
      301 atgtcgcgcg ctatgagcag ttggccgatc ccaagtggaa aagcgaaatc tgcacacgcc
      361 cgagcagcca cccgtataac ctttctttaa tatccagcat gatcctccac ttgggcgagg
      421 ataaggcgcg cgactgggcg cgcggcgttg ccacgaacct ggcgcggccg ccaagaggcg
      481 gcgacaccga ccaattgacc gcggtgggcg tcggtgaatg ttcgatcgcg ctgtcaaacc
      541 attactacta tgtccggctt atgcgttcga ccaagccgga agatcgcgcg ctggtggaaa
      601 aggtccacat cgtttggccc aatcagaacg atcgcggcgc tcatgtcaac atatccggcg
      661 gcggcatact gaagaacgcc ccccatcgcg acgctgcggt taagtttctc gagtatctcg
      721 ccagcgacac ggcacaagct tattttgccg atggcaacaa cgaatggccc accgtcaaag
      781 gtgtgaagct ggcgaatccc cagctcgaga ctttcggccg gtttaggacc gatgcgttgc
      841 cattggcaaa tttgggcaag acccaggcgg cggcccagcg actggccgac caggtcggct
      901 ggaaatgaag cctcaaccct agcacttgac cgagagacac catgacaacg attgccgctg
      961 ctttgcgctc gaaaaccatc agcggcctca ccgtcccgcg gatcggtggt cttggcgtgg
     1021 tgtcgttgat aaccgccgcc ctggtggtgg cgccgattgc tgcagtcgtc tggaacatat
     1081 tcttgcccag cgaggctacc tgggcgcacc tgatagcgac ggtcctaccc gagtacatcg
     1141 ccaccacatt tctgctgctt gtattggtcg ctgcgggagt tgtttgctgc ggcgtgctct
     1201 ccgcgtggtt ggtgaccgcc tatgaattcc ctggccgacg cgtcctggaa tgggcgctgg
     1261 tgttgccaat ggcgatcccc gcatatgtca tggcctatgc ttacaccgat tggctccaga
     1321 cctcgggacc ggtgcaaagc atgctgcgcg aattcaccgg ttggcgggtg cgcgagtact
     1381 ggtttccgga aatccgctca ttgccaggcg ccgccaccat gctgtcgctc gcgctctatc
     1441 cctatgttta cctgctgaca cgcagcgcct tcctcgaaca gtcacgcagc agctatgagg
     1501 ccgcccaact ggccggctat ggcgcgtggg gaagattttg gcgagtgtca ttgccgctgg
     1561 cgcgcaccgg aattgtcgcc ggcgtcgcct tggcgctgat ggagacactc gctgatttcg
     1621 gcaccgtttc
//
LOCUS       DATIRS010000028         1587 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_199528, whole genome shotgun sequence.
ACCESSION   DATIRS010000028 DATIRS010000000
VERSION     DATIRS010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199528"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            73..1104
                     /locus_tag="VLM90_00320"
     CDS             73..1104
                     /locus_tag="VLM90_00320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11424.1"
                     /translation="MLNLKVGVTKNPRFEPLIDGSVKSAKATLDIHVTTPPELFFRNL
                     KNDEFDVFEMSLSEFLITRERAKGERWQWAALPIFPAKAFVWMTLFINTGAGIQALCD
                     LKGKRVGIPDYVMTAGLWFRVILKELCNIQPNDISWYIGRVQELSHGGLLGMDSRPPA
                     GVSTTWLTKEQTFDVMLDKGEIDAAYGFAPRHDPKLMTLNMDRYGGTPLEGNPRLRKM
                     FADGGLSIVDQFYKKTGIVPANHVIVAQRRVLEQNPELPREILRLFSESKRIAYERGN
                     FGNPAYLYFEHSDRASQEQMVGTDPFPFGIEKNKPMLETLFRSSHEEGLTQRLAKIDE
                     VFFPGLLDT"
     gene            1169..>1587
                     /locus_tag="VLM90_00325"
     CDS             1169..>1587
                     /locus_tag="VLM90_00325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11425.1"
                     /translation="MANLFGTVDADGHLEENHIYWKAQLPEKYKSQAPERRDSGNGQL
                     RTIIEGKAWPRPSGLGIGVGGPYSRPHPRRPGMTDPKARLVDMDSEKIDVAVLFGAGL
                     AGTVPALEDGGLAAALASARNTWLAEYCAADPKRIKGT"
BASE COUNT          365 a          492 c          433 g          297 t
ORIGIN      
        1 ccgaccgcgg agtttgacct tcctgcgtgc ctcggcgtat gaaggacaca tcttgaagaa
       61 acgagttatt caatgttgaa cctaaaagtc ggtgtcacca agaatccccg ctttgagccg
      121 ctcatcgacg gtagcgtcaa atcggccaag gcgactctgg atattcacgt caccacaccg
      181 ccggagctat ttttcaggaa tcttaagaac gacgaattcg atgtcttcga aatgtcgctc
      241 tccgaatttc tcatcacccg cgagcgggcc aagggcgagc gctggcagtg ggcggcgcta
      301 ccgatcttcc ccgccaaagc ctttgtctgg atgacgctgt tcatcaacac cggcgccggc
      361 atccaagcgc tctgcgatct caaaggtaaa cgagtcggca tccctgacta cgtcatgact
      421 gcgggtttgt ggttcagagt tattctaaag gaactttgta atatccaacc gaatgatatc
      481 tcctggtaca tcggccgggt ccaagagctg agtcatggcg gcctgctcgg catggacagc
      541 aggccccccg ccggcgtctc tacgacctgg ctcactaagg agcagacctt cgatgtcatg
      601 ctcgacaagg gcgagatcga cgccgcctac ggcttcgcgc cgcgccatga ccccaagctg
      661 atgactttga atatggaccg ttacggcggc acgccgctgg aaggcaaccc gcggctgcgc
      721 aaaatgttcg ccgacggcgg cctatccatc gtcgaccagt tctacaagaa aaccggcatc
      781 gtgccggcca accacgtcat cgtcgcccag cgccgagtcc tcgaacaaaa tcctgaactg
      841 ccgcgcgaaa ttttgcgcct gttcagcgaa agcaaacgca tcgcctacga gcgcggcaac
      901 ttcggcaacc cggcttatct ctatttcgaa cacagcgatc gcgccagcca ggaacaaatg
      961 gtcggcaccg accccttccc cttcggcatc gagaaaaata agccaatgct ggaaacgctc
     1021 tttcgcagtt cgcacgaaga aggcctaacc caacgcctgg cgaaaatcga cgaagtcttt
     1081 ttccccggtc tgctcgacac ctaacgctgg ggaactttgg aatctggaat ttgtagtcgg
     1141 taattccaac gagcgaagcg aggaatttat ggcaaaccta ttcggcaccg tcgacgccga
     1201 tggccacttg gaagaaaatc atatctactg gaaagcgcag ctgccagaaa agtacaaaag
     1261 ccaggctccc gagcggcgcg acagcggcaa cggccagttg cgcacaatca ttgaaggcaa
     1321 agcctggccc cgccccagcg gcctcggcat cggcgtcggc ggcccctaca gccggcctca
     1381 tccgcgccgg cccggcatga ccgatcccaa agcccggttg gtggatatgg acagcgagaa
     1441 gatcgatgtc gcggtgttgt tcggcgccgg cttggcgggg accgtcccgg cgttggaaga
     1501 tggcggactc gccgcggccc tcgccagcgc gcgcaacact tggttagccg agtattgcgc
     1561 cgcagatcca aaacgcatca aaggcac
//
LOCUS       DATIRS010000029         3192 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1477927, whole genome shotgun sequence.
ACCESSION   DATIRS010000029 DATIRS010000000
VERSION     DATIRS010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3192
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1477927"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2532)
                     /locus_tag="VLM90_00330"
     CDS             complement(<1..2532)
                     /locus_tag="VLM90_00330"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HSQ11426.1"
                     /translation="MTDLALSEKLAQFLRGTWTGSKRIQGVQGGARAYLLALAAAHGQ
                     RPMLVIAPSANQAETLYDDLAFFLGEERGLAPLRRRLHLFPSWEVLPFENLSPHPENI
                     AGRLEGLYKLIEEPAPILIATPAALMQRVIPKETLKQSYLYIVVGQDLPREGLLDHLI
                     HWGFQNVPLVEERGDFSVRGGIVDLFPPGYGRPIRLEFDGDRLESIREFNPANQRSEA
                     VQEEFILLPMKEFALKRAGIDESIKRLEQRALELEVDRHERQALLESLREGIPVAGVE
                     FLLPFFCPELVPVTHYLPTNTLVWFDGADRVEAESERFGQHAWVRNRQAKEDHRLVAP
                     VEQLYLNEHEWSATIEPFSAIHGEALMLLAAAEKAQATTLNVEAFLTTDLRQDPALHG
                     KDVSLAPLVESLKSWSNEKVIFVAPTKGDAVRLRDLLGGYQVEVALVEDAIPTVLARP
                     EIARGIVRGNLNQGFRLPEAQLIFVTFDEIFATRKRQPTTATKSYPSHFLSSLSELKQ
                     DDYVVHLDHGIGVYRGLKFLKVAGVKGEFLHLEYEAGDRLYLPVDRINMVQKYIGGDG
                     AQPSLDRVGGTAWGKVKAKAKKTVLAMAEELVQLYALREARGGTAFAPPDNLYKEFEA
                     AFEFEETPDQQRAIDDTLASMQSRKPMDRLVCGDVGYGKTEVAMRAAFLAVEGGKQVA
                     VLAPTTILAQQHMQTFRHRFRNHPVRIEMVSRFLTSKEVAQVLSDTAKGQVDIVVGTH
                     RLLQKDVEFRDLGLVIIDEEHRFGVVHKERLKKMRALVDVLSLTATPIPRTLHMSLVG
                     IRDLSIIETPPVDRLAIQTYVTRYDDRLIRDAILREIERGGQVFFL"
     gene            complement(2540..2908)
                     /locus_tag="VLM90_00335"
     CDS             complement(2540..2908)
                     /locus_tag="VLM90_00335"
                     /inference="COORDINATES: protein motif:HMM:NF015690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF309 domain-containing protein"
                     /protein_id="HSQ11427.1"
                     /translation="MDARLHDGIRLFNDRKFFACHEILEEFYRDSEAENKAFLEGLIQ
                     LAAAFRMFVDFAEVKGAVRGIYQALIRFENYQPVFLQVRVKELCAEAEAWAKAAEPPG
                     STPSALNIPKIQLQRFSLFS"
BASE COUNT          670 a          980 c          920 g          622 t
ORIGIN      
        1 caggaaaaac acctgaccgc cccgttcgat ctcgcgcagg atggcgtctc ggatcagccg
       61 atcgtcatag cgagtaacgt aggtctgaat agccagccgg tccaccggcg gcgtttcaat
      121 aatgcttaaa tcgcgaatgc caaccagcga catatgcaaa gtgcgcggaa ttggcgtcgc
      181 ggtaaggctc aagacatcga ccagcgcgcg catttttttc agccgctctt tgtgcaccac
      241 gccgaaacgg tgctcctcgt cgatgatcac cagacccaag tccctgaact cgacgtcctt
      301 ctgcaacagc cgatgggtgc cgacgacgat atcgacctgc cctttggcag tgtcgctgag
      361 gacctgcgca acttctttgc tggtcaaaaa ccggctgacc atctcgatgc gcaccggatg
      421 attgcggaag cgatggcgaa aggtctgcat atgctgctgc gccaagatcg tcgtcggcgc
      481 caggaccgcc acctgcttgc cgccctcgac ggcgagaaac gcggcgcgca tggcaacttc
      541 ggttttgccg tagccgacat cgccgcagac caagcggtcc atcggctttc tgctctgcat
      601 gctcgccagc gtgtcgtcga tggcgcgctg ctggtccggc gtctcttcga actcgaaggc
      661 ggcctcgaac tctttgtaca ggttgtccgg cggcgcgaac gccgtgccgc cgcgcgcttc
      721 gcgcaaggcg tagagctgga ccaactcttc ggccatggcg agcacggttt ttttcgcttt
      781 ggctttgact tttccccagg ccgtgccgcc cacccggtcg agggacggct gcgcgccatc
      841 gccgccgatg tatttctgca ccatgttgat gcggtcgacg ggtaaataga gccggtcgcc
      901 cgcttcatat tcaagatgga gaaactcgcc cttgacgccg gccaccttga gaaacttgag
      961 gccgcggtaa acgccgatgc catggtcgag atggacgacg taatcgtcct gcttcaactc
     1021 gctcaggctg gagagaaaat ggctcggata actcttggtc gccgtggtcg gctggcgctt
     1081 gcgcgtggcg aagatctcgt cgaaggtgac gaagatcagc tgcgcttcgg gcaagcgaaa
     1141 gccttgattc aaattgccgc ggacgattcc tcgcgcgatc tccgggcgcg ccaacaccgt
     1201 cggaatggca tcttcgacta gcgccacttc aacttggtag ccacccagga ggtcgcgcaa
     1261 gcgcaccgca tcgcccttgg tcggcgcgac gaagatgact ttctcgttgc tccaggattt
     1321 caaactttct accagcggcg ccagcgaaac atccttgccg tgaagcgccg ggtcctggcg
     1381 caaatcggtg gtcagaaaag cctcgacgtt caacgtcgtc gcctgggcct tctccgcggc
     1441 ggcaagcagc atcaacgctt cgccgtgaat ggcggaaaac ggctcgatcg ttgcgctcca
     1501 ctcatgttcg tttaagtaga gctgctccac cggcgccact aggcggtgat cttctttggc
     1561 ctgccggttg cgcacccagg catgctggcc aaagcgttcg ctttccgctt cgacgcggtc
     1621 ggcgccatcg aaccagacca gagtattggt cggcagataa tgggtcactg gcaccaattc
     1681 ggggcagaag aatggcagca agaattctac gccggccacc gggatgcctt cgcggagcga
     1741 ttcgagcagc gcctggcgct cgtgccgatc gacttccaac tccagcgcgc gctgctccaa
     1801 acgcttgatc gactcgtcga tgccggcgcg tttgagcgcg aactccttca tcggcagaag
     1861 tataaattct tcctgcaccg cctcggagcg ctgattggcc ggattgaact cgcgaataga
     1921 ttccaagcgg tcgccgtcga attcgaggcg aatcggccgg ccatagccgg gcggaaacag
     1981 atcgacgata ccgccgcgca cactgaaatc gccgcgctcc tcgaccaaag ggacattttg
     2041 aaaaccccag tggatcagat gatcgagcaa cccctcgcgc ggcaaatctt ggccgacgac
     2101 gatgtagaga taggattgct ttaaggtctc tttcggaatc acccgctgca tcagcgccgc
     2161 cggcgtcgcg atcaagatcg gcgccggctc ttcgatgagc ttgtagagcc cttccaaacg
     2221 gccggcgata ttttccggat ggggcgatag attttcaaag ggcaagactt cccaggatgg
     2281 aaacagatgg agccggcggc gcaacggcgc caaaccgcgc tcctcgccga gaaaaaaagc
     2341 caaatcgtcg taaagagttt ccgcctggtt ggcgctcggc gcgatcacca gcatcggacg
     2401 ctggccatgg gccgccgcga gagccagcag ataggcgcgc gcgccgccct ggacgccttg
     2461 aatgcgcttg ctgcccgtcc aggttccgcg caggaactga gcgagctttt cgctgagcgc
     2521 aagatcggtc ataggtcggt catgaaaaga ggctgaaacg ttggagctgg atcttcggaa
     2581 tgttcaatgc cgacggcgtg gagcccggcg gctcggccgc tttggcccaa gcctcggctt
     2641 ccgcgcaaag ttccttcact cgcacttgaa gaaacaccgg ctgatagttc tcaaagcgaa
     2701 tcagcgcctg ataaatcccc cgcaccgccc ccttcacttc ggcgaagtcg acaaacatac
     2761 gaaacgccgc cgccagctga atcaaacctt cgagaaacgc tttgttctcc gcctcgctgt
     2821 cacggtaaaa ctcctccagg atctcgtggc aagcgaagaa cttccggtcg ttaaataggc
     2881 gtatgccgtc gtgcagccga gcatccataa gtgtgaaaaa tctacgctag caacttctcc
     2941 gcaacggctc aaggcgagtt gcttcgaccg ctgtgaacca atgattttac cggctgaatt
     3001 gtttgaatta cccgaacggc ttgaaaacgt ttaacgccgc gcccacaacc gctggtcgta
     3061 cagcgccacc gccggcaccg cggcgagcca gatgcagacg tcggagattg ccagtagcaa
     3121 ggtggaaagc gtaaacgaca tggtatagct gccggtccag tcgtggaaca cgccgccgaa
     3181 gaaagagcat aa
//
LOCUS       DATIRS010000030         1673 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1772957, whole genome shotgun sequence.
ACCESSION   DATIRS010000030 DATIRS010000000
VERSION     DATIRS010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1673
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1772957"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            254..>1673
                     /locus_tag="VLM90_00340"
     CDS             254..>1673
                     /locus_tag="VLM90_00340"
                     /inference="COORDINATES: protein motif:HMM:NF013761.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HSQ11428.1"
                     /translation="MANVTAEQEVQRLARELYQNAARQKPALFDAQDLLGRMIAWSLD
                     DESLRVALFRFVDVLPSLESSSEIGRHLEEYFSRVDHALSGLAILAQALHAGTLVAPI
                     VRRNVIQLARRFIAEESGNHLTSVLSSLRKEPAAFTIDVVGEATVSDGEAAAMQQRYL
                     ELMRRLVAASAKWSECAQIDQSPNGKIPQVNLSVKLSSLCARFDPLDPNTDAIVSARL
                     RGLFREAARLDAAVTVDMEQYAFRELTLAIFCTVLEEDEFHERPYAAIALQAYLKDAE
                     KDVSDLIRWARGQERRVGVRLVKGAYWDSEIAWAKQKNWPIPVFLDKAATDANYERLS
                     RLLLEGHDVIDAAFGSHNLRSLAHAIVAAQEIGVPASGYEMQMLYGMAEPVRQAIVQN
                     GQRVRVYLPVGELLPGISYLIRRLMENTSNTSFLRQTYAEKKAVESLIKAPVPATPVT
                     HLLDYAAARREFRNQAPIDFSSE"
BASE COUNT          344 a          486 c          502 g          341 t
ORIGIN      
        1 acatgttggt gttagttttt ggatagcaat gcaatacgaa ggacacgaag gtatcggacc
       61 atttgaactg caaacttcgt gatcttcgtg tccgtcgtgg aaaaccaagc aaactgaacg
      121 cgacacatgc cccagtcaaa agtctaaccc cccaaaatcc tagctggcgc caaaggtaac
      181 aggctcgcgc gccgctcaca atcggttttc cgccgcagcg cggcaggttt atgatagagt
      241 tccggacgag accatggcga atgtaaccgc cgagcaagaa gtccaacggc tggcgcggga
      301 gctataccag aacgcggcgc ggcagaagcc agcgctgttt gacgcccagg atttgctcgg
      361 ccggatgatc gcctggtcgt tggacgatga gtccctgcgg gtggcgctgt ttcgctttgt
      421 cgacgtgctg ccgagtctgg aatcatcttc cgagatcggc cgtcatctcg aagagtactt
      481 ttctcgggtc gatcatgcgc tgagcggctt ggcgattctc gcccaggcgc tccacgccgg
      541 tactcttgtt gcgcccatcg tccggcgcaa cgtcatccag ctcgcgcgcc gcttcatcgc
      601 cgaggaaagc ggcaatcatt tgacctcggt gctgtcgagt ctgcgcaagg agcccgccgc
      661 gtttaccatc gatgtcgtcg gcgaggcgac ggtgagcgac ggcgaagcgg cggcgatgca
      721 acagcgctat ctcgagctca tgcgccggct tgtggcagcg agcgccaagt ggtccgagtg
      781 cgcgcagatc gatcaatcgc cgaacggcaa aatcccccag gtcaatcttt cggtaaagct
      841 gtcatcctta tgcgcgcgct tcgacccgct cgatccgaat accgacgcca tcgtcagcgc
      901 gcgcttgcgc gggctgtttc gcgaagcggc tcgcttggac gccgcagtga cggtcgacat
      961 ggagcaatat gcttttcgcg aactaaccct ggcgattttt tgcaccgtgc tcgaagagga
     1021 cgagtttcat gagcggccct atgcggcgat cgcgctccaa gcgtatctta aagatgccga
     1081 aaaggatgtc agcgatttga ttcgctgggc gcgtggccaa gagcgccgcg tcggagttcg
     1141 cctcgtcaaa ggcgcctatt gggacagtga gatcgcttgg gcgaagcaaa agaactggcc
     1201 aattccagtt tttttggaca aggctgcaac tgacgccaac tacgaacggc tgagccgttt
     1261 gctgctcgaa ggccacgacg tgatcgacgc cgccttcggc agtcacaatc tgcgcagcct
     1321 ggcccacgcc atcgtcgcgg cgcaagagat cggcgtgccg gccagcggtt acgagatgca
     1381 gatgctctac ggcatggccg agccggtgcg ccaggcgatc gtgcagaatg gccagcgcgt
     1441 gcgcgtctat ctgccggtgg gcgagttgct gccgggcatt tcttatctga ttcggcgctt
     1501 gatggagaac acctcgaaca cttctttttt gcgtcaaacc tacgccgaga aaaaagcggt
     1561 tgaaagtttg atcaaagcac ccgtgccggc aacgccggtg acgcatctat tggactatgc
     1621 cgcggcacga agggaatttc gcaaccaagc gccaatcgat ttttcctccg agg
//
LOCUS       DATIRS010000031         1607 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_3165, whole genome shotgun sequence.
ACCESSION   DATIRS010000031 DATIRS010000000
VERSION     DATIRS010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1607
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3165"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..248
                     /locus_tag="VLM90_00345"
     CDS             <1..248
                     /locus_tag="VLM90_00345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11429.1"
                     /translation="INDPDILQSAYDAFAKRLVNRRLIVPAKMVAETIENAREDGTVI
                     RRKPNEVFDNIFVENLDKSGFMKELWGGKVPEETRKP"
     gene            305..1486
                     /locus_tag="VLM90_00350"
                     /pseudo
     CDS             305..1486
                     /locus_tag="VLM90_00350"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
BASE COUNT          341 a          439 c          488 g          339 t
ORIGIN      
        1 ggataaacga ccccgacatc ctgcaatccg cttatgacgc tttcgccaag cgcttggtta
       61 accggcgctt gatcgtgccg gcgaagatgg ttgccgagac catcgaaaat gcccgcgaag
      121 acggcacggt gattcgccgc aagccgaacg aggtgttcga caacatattc gtcgaaaatc
      181 tagacaagag cggcttcatg aaagagctgt ggggcgggaa agttcccgaa gaaacgagaa
      241 agccgtagta tcaccgtcat aacacccatc ctcgactgaa agtcactccc cagtttgcga
      301 atccatgaaa atctttctta gttacgcgtc gcaagatcgc gagccggcga aatccgtgta
      361 tctggcgcta cgggatcagg gccatacggt tttcttcgac cgcgccgacc tgcctgccgg
      421 ggaggagtat cacaatcgca tccggtctgc ggtcgagggt tccgatctgt ttatattctt
      481 gatcacggcc aatgctgttg acgccggcag ttataccttg accgaattgg atattgccga
      541 aaagtccggg gtcaaattgt tgcccgtggc gctcggtacc atcgatcttg aaaggttgcc
      601 ggctctactt aaagcggtga cgtttctcca gatcgacggc aacctgcccg ctgccgttgc
      661 cgctgaggtc tatcgaattg ccggcgagcg atggcgcaag cggctcaaat atttcgccac
      721 agcgctggtg gcggccggag ttattgctgg cgggattttc tatagcctgc gcggccgaga
      781 gagcatggag aggtccggta aagatggcgc gccggcagtt ttaattcctg ccggggcttt
      841 tgtcgcgggc gatgatgaaa actcgccgcg tcgcgagcta ttcgtcgacc cgttttacct
      901 cgaccgctac gaagtgaccg ttggccgtta tgcgatcttt ttgcaggcca ccggaaacgt
      961 caggccgccg gaggaatggc aaaccgtcga tctcaagaac ggcgctgact tgccggtggt
     1021 cggcgtcgat tggcaggatg ccaacggtta ctgacagtgg gttggccggc gcttgccgac
     1081 cgatgcggag tgggagcggg cagcgcgcgg cgcggatgaa agaaagtttc cttggggcaa
     1141 tgaaccgccg acatcagagc ttgcgcgctt tgcgcagaag tcccagagcg cggtttacca
     1201 ggacggtgtc gctcgagtcg gcagccatcc taaaggcgcc agtcctttcg gcatacagga
     1261 tatgtcgggc aatgcctggg agtgggtggc ggattggttc tcggaaagct tcccagccgc
     1321 ggaccggcgc aaccccaggg ggccaagcag cggtaccagc aaagtgctgc gcggcggcgg
     1381 ctggtacgat caagcggatc ggctggccag caccaaacga atgcacgcca atcccgagca
     1441 gcgcgataac agtatcggtt ttcgctgcgc cagtgacgcg aaataatctg actgcgatgc
     1501 acattttcaa tgtctgactt tgaaatccat tcccagctgc tcgccgattg ccatccgctt
     1561 ggccgattgg aattctgtca tgtgttgttg aacaaaaatg cgctgct
//
LOCUS       DATIRS010000032         2392 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_986478, whole genome shotgun sequence.
ACCESSION   DATIRS010000032 DATIRS010000000
VERSION     DATIRS010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2392)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2392)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2392
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_986478"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            47..727
                     /locus_tag="VLM90_00355"
     CDS             47..727
                     /locus_tag="VLM90_00355"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HSQ11430.1"
                     /translation="MDVDKLKQDIVTASHILHQQGIAAAFGHVSARIPGTNTFIFPPR
                     MSPALVRLDNLLTLDVDGNQLSGEGRPNTEFWIHARIYQARPDVQSVCHVHPPSCVVL
                     GALGETVRPLHASGAVFRNDVQVFDPITLIRTRELGDAVAKTLGKHGAMLLRGHGVNV
                     ADRDVRRVCIMTLWMEEAANYQLRAMSAGKPRYFTEEELAVIYPQVSGAEVSNRAWEY
                     FSSRVESR"
     gene            794..1477
                     /locus_tag="VLM90_00360"
     CDS             794..1477
                     /locus_tag="VLM90_00360"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HSQ11431.1"
                     /translation="MALKHSELRQSVIESANFLVRIGAISMSHHGNFSVRVPGTDTIL
                     LTASSSFDNLQPENLALLDLDGKLVEGEINPTNAEIVHMHAIVYKQRPETGAVVHTHS
                     TYATSFALASRALACSYEALVRNEMADGVPLAKYGPRGSGESIANIVTALNGTKNTKA
                     VLLENHGVLAFGANPAAAARANLIVEEAAQMAIYAEVLGGAKIIPPELLKATVGRRDE
                     FARAGVQKV"
     gene            1511..2374
                     /locus_tag="VLM90_00365"
     CDS             1511..2374
                     /locus_tag="VLM90_00365"
                     /inference="COORDINATES: protein motif:HMM:NF025091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/PEP mutase family protein"
                     /protein_id="HSQ11432.1"
                     /translation="MAMTANEKRKALKAMMQQPTCHLAPSCNDGIQARLVEWQGFPLV
                     HISGSGQHRSLGFADAGLLTLTEMINKAREIVDAVNIPIVSDAETGYGNAVNVYRAVK
                     EFDRTGVAAIHIEDQMTPKRAGHEGFDVGLISREEFVAKIKAAVDARTDQDLVIIARS
                     EAKDSLQERLERTQACIEAGADASWVSARTEEEILAYAKLGKPLVGVPPRGVMTIQRY
                     GELGGRVGCIPTVLQVAMLHGMRQCLEELKKNGTEAAYFKNTPGIEDTRKWYANMGNA
                     ELKEMEKKYGY"
BASE COUNT          549 a          738 c          676 g          429 t
ORIGIN      
        1 cgccttggca taagtgattt gagataatct gtgaaggggc gcacccatgg acgtcgacaa
       61 actcaaacaa gacatcgtca ccgccagcca cattctccac cagcaaggca tcgccgccgc
      121 ctttggccat gtcagcgcgc gtattcctgg cacgaatacg ttcatattcc cgccgcgcat
      181 gagtcccgcg ctggtgcgac tggataatct tttgacgctc gatgtcgacg gcaatcagct
      241 ttccggcgaa ggccggccca acaccgaatt ctggattcac gcgcgaattt atcaagcccg
      301 ccccgatgtc caatcggtat gccatgtgca tccgccgagc tgcgtggtgt tgggcgctct
      361 cggtgaaact gtgcgcccgc tgcacgcgtc gggcgcggtg tttagaaatg acgtccaggt
      421 cttcgatccg atcaccttga ttcgcacccg cgaattgggc gatgccgtgg ccaagactct
      481 cggcaagcat ggcgccatgt tgctgcgcgg ccatggcgtc aatgtcgccg accgagatgt
      541 ccggcgcgtc tgcatcatga ccctatggat ggaagaagcg gccaattatc agctgcgcgc
      601 catgtcggcg ggcaagccgc gctatttcac ggaggaggaa ctggcggtca tatatccgca
      661 agtctccggt gcagaagtct ccaaccgggc gtgggaatat ttcagcagcc gagtcgaatc
      721 tcgatagcca aaggcttgag accgtccaac tgatcgcgat attgtcggtt gcaacaatac
      781 gaggagaaaa ccaatggcac taaaacacag cgaactgcgc caatcggtca tcgagagcgc
      841 gaattttctc gtccgcatcg gcgcgatctc gatgagccac catggcaact ttagcgtgcg
      901 cgtgcccggc accgatacga tcttgctcac cgcatcgagc tccttcgata atttgcagcc
      961 ggagaatctc gcattgcttg atctcgatgg caaactcgtc gaaggcgaga tcaacccgac
     1021 caacgccgag atcgtccaca tgcacgccat cgtctacaaa caacggccgg agaccggcgc
     1081 cgtcgtccac acccactcga cctatgccac cagcttcgcc ctggcgagcc gcgccttggc
     1141 ttgctcctat gaagcgttgg tacgcaatga aatggccgac ggcgtgccgt tagcgaaata
     1201 tggcccgcgc ggctccggcg aatccatcgc caacatcgtc accgccttga atgggacgaa
     1261 gaacaccaaa gccgtgctct tggaaaacca cggcgtgctc gccttcggcg ccaatcccgc
     1321 cgccgcggcg cgggccaatt tgattgtcga agaagcggcg caaatggcga tctacgccga
     1381 ggttttgggc ggcgccaaga tcatcccgcc ggaattactg aaagccaccg tcggccgccg
     1441 cgatgaattt gcccgcgccg gcgtgcaaaa ggtttaaata acgataacga accaggaagg
     1501 aagaaagaaa atggctatga ccgcaaatga aaaacgtaaa gcgttgaaag cgatgatgca
     1561 gcagcccacc tgtcatctgg cgccgagttg taacgatggc attcaagccc gcttggttga
     1621 gtggcagggc tttccgctgg tgcatatttc cggcagcgga caacaccgct cgctcggatt
     1681 tgccgacgcc ggcttgctta ccctcaccga gatgatcaac aaagcgcgcg aaatcgtcga
     1741 cgccgtcaac attcccatcg tcagcgacgc cgagaccggc tacggcaacg ccgtcaacgt
     1801 ctatcgcgcg gtaaaggaat tcgaccgtac cggcgtcgcc gccatccaca tcgaagacca
     1861 aatgacgccc aagcgcgccg gccatgaagg cttcgatgtc ggcttgatct cgcgcgagga
     1921 attcgtcgcc aaaatcaaag ccgccgtcga cgcacgcacc gaccaggacc tcgtcatcat
     1981 cgcccgctcg gaagccaagg actcgctgca agaacgcctc gaacgcaccc aggcctgcat
     2041 cgaagccggc gccgacgcct cctgggtcag cgcgcgcacg gaggaagaaa tcctggctta
     2101 tgccaagctc ggcaagccgc tggtcggcgt gccgccgcgg ggcgtgatga cgatccagcg
     2161 ttacggcgag ttgggcggcc gcgtcggctg catccctacg gtgctgcaag tcgccatgct
     2221 gcacggcatg cgccaatgct tggaagaact gaaaaagaac ggcacagaag cggcctattt
     2281 caaaaacact cccggcatcg aggatacgcg caaatggtac gccaacatgg gcaatgccga
     2341 gctcaaggaa atggaaaaga agtacggcta ctgagcaggt cgtattcatg ac
//
LOCUS       DATIRS010000033         1752 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1576370, whole genome shotgun sequence.
ACCESSION   DATIRS010000033 DATIRS010000000
VERSION     DATIRS010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1576370"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..481
                     /locus_tag="VLM90_00370"
     CDS             <1..481
                     /locus_tag="VLM90_00370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11433.1"
                     /translation="TEIASLNRQINELANRPNTPGYTTEQLDQEVAEKTAALKSQLSQ
                     RDELVKSKTSMFKKAEADFRANIMELEQRLKDAEGTLQRQETQLKDKETVLQATAAKE
                     VEIGKLIKRLSLECENLSNELQEKTRLMGQLDGKKPQTQSDKNVWRRMIGRLQDEPL"
     gene            complement(621..1490)
                     /locus_tag="VLM90_00375"
     CDS             complement(621..1490)
                     /locus_tag="VLM90_00375"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ11434.1"
                     /translation="MPAYMAEDKGFFKRRELDTRMVTFSRSNDINALVSGDIQFDLTA
                     PDKVVHSALGGFPVKMVMGTARGLNLALTVHPSIRSAADLKGKSVAITGFSGLPYTGL
                     LLCLRELGMTKEQVVPLNIGGKSARFEALLGNRVPAAILDPPYTTLAAKEGYRLLVDL
                     APLDVPYLRNIVAVSEKTLRDDGRMVARFVAGLAEGMQFYRNKSNKDDSMKILAKYLR
                     LPLEKNRAMIEEGYETYREMILKKPYADAGAMKILLEIIAESNPKAKSVNLASLVDSS
                     FVERLDREGMFDR"
     gene            complement(1491..1637)
                     /locus_tag="VLM90_00380"
     CDS             complement(1491..1637)
                     /locus_tag="VLM90_00380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11435.1"
                     /translation="MEYWSDGIIARNRQFTTRLIYFWVLSMPALVNAQIKSIIIGEGV
                     RGAM"
BASE COUNT          410 a          550 c          459 g          333 t
ORIGIN      
        1 aaccgagatc gcatcgctaa accgccagat caacgaactg gccaaccgcc ccaacacccc
       61 cggctacacg accgagcagc ttgaccagga agtcgccgaa aaaaccgcag cgctcaagag
      121 ccaactgagc cagcgcgacg agctggttaa gtcaaaaacc agcatgttta aaaaagctga
      181 agcggatttt cgcgcgaata tcatggagct cgaacagcgg ctcaaagacg ccgaggggac
      241 attgcagcgt caagaaactc agctcaaaga caaagagacc gtccttcaag cgacggcggc
      301 gaaagaagtg gaaattggca agctgatcaa acggctttcc ctggaatgcg aaaacctgag
      361 caatgagtta caggaaaaga cccggctgat gggccaactc gacggcaaaa agccgcaaac
      421 ccaatccgac aagaacgtct ggcgccgcat gatcggccgg ctccaggacg aaccgcttta
      481 gtaattccct cgacgcagtg ttctcgctgc cttaccatga acattatggt tcggtggaaa
      541 acccaactcg ttctccgttc gccctgtgcg agtcgaagtg cttcgtgcag cgcacacagc
      601 cacgctgcgg cacgccgctg ctagcggtcg aacatcccct cacggtccaa acgctcgaca
      661 aacgacgagt ccactagaga cgctaagtta acgctcttgg ccttaggatt ggactcggcg
      721 attatttcca gcagaatttt catcgcgccg gcatcggcat aaggtttttt caatatcatt
      781 tcacgatagg tttcgtagcc ttcctcgatc atggcgcggt ttttctccag cggcaggcgc
      841 agatacttcg ccaagatctt catactgtcg tctttgttgc tcttgttgcg gtagaactgc
      901 atgccctcgg ccaggccggc gacaaagcgc gccaccatgc ggccatcgtc gcgcagggtt
      961 ttctccgaca ccgcgacgat gttgcgcaaa tagggcacgt ccagcggcgc gagatcgacg
     1021 agcaagcggt acccttcctt cgccgccagt gtcgtgtagg gcggatcgag gatcgccgcc
     1081 ggcacgcgat tgccgagcaa ggcttcgaag cgcgcggact tgccgccgat attgagcggc
     1141 acgacctgct ccttggtcat accgagctcg cgcaaacaga gcagcaggcc ggtgtagggc
     1201 aatccggaaa agccggtgat tgctaccgac ttgcctttga gatcggccgc cgaacgaatc
     1261 gatggatgca ccgtcaaggc gagattcaac ccgcgcgccg tgcccatcac catcttcact
     1321 gggaagccgc cgagagcgct atgcacgacc ttatccggcg ccgtcagatc gaattgaata
     1381 tcgcccgaca ccaaggcatt gatgtcgttg ctgcggctga acgtcaccat gcgggtatcg
     1441 agctcacgcc gcttgaagaa gcctttgtcc tcggccatgt acgccggcaa ttacatcgcc
     1501 ccgcgcactc cctcgccgat gatgatcgac ttgatctgcg catttaccag cgccggcatt
     1561 gacagcaccc agaaataaat cagccgggtc gtgaactgcc tattccgagc tattattcca
     1621 tcactccaat actccattac tccactcctc cctcgtgcac cgccaccgtc tgcatttgcg
     1681 tcgcggtgcg ccccgtaata tacgccgact tggcgcccgc gccaccggcg accacgagcc
     1741 aaatatcctc gg
//
LOCUS       DATIRS010000034         1620 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1084805, whole genome shotgun sequence.
ACCESSION   DATIRS010000034 DATIRS010000000
VERSION     DATIRS010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1620)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1620)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1620
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1084805"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..794)
                     /locus_tag="VLM90_00385"
     CDS             complement(<1..794)
                     /locus_tag="VLM90_00385"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HSQ11436.1"
                     /translation="METGITYAIIAGLFWGTSPVLVKRGLVHADVSAATLYQQATILV
                     TLIVAALVEGELFAGIISPLAIGVFAGTGVIGAYLGRTLFVKTVDQIGASRAQSLNNS
                     SPLITVLLAGLLLGEPLTWSVLAGVGLIISGVFFIAETDTQDSRRDGNKVLTVTSIMA
                     TICYGIVPVLKKFGTANGGPPVMGALVMHATGLLLLVTLGSLLKIEFKPERIATSSVV
                     CFVSAGFLYAIGSIMTLKALTYAPASVAAPVWSAQPIVSFFLAKSML"
     gene            complement(804..1487)
                     /locus_tag="VLM90_00390"
     CDS             complement(804..1487)
                     /locus_tag="VLM90_00390"
                     /inference="COORDINATES: protein motif:HMM:NF015146.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HSQ11437.1"
                     /translation="MKGVDELNARIVGCRKCPRLVRWREACAKKPPRRYLGEDYWAKP
                     LAGVGDPRARVLIVGLAPAAHGGNRTGRMFTGDRSGDWLYGALYQAGFANQPNSNHRN
                     DGLKLTDCYVTAAVHCAPPANKPNLIEFKRCRPYLVEELRLFGAIQVVIVLGKIAFDS
                     VLTAYRETGGSLPKPRPKFGHGASYELADGLRLICSYHPSQQNTFTGKLTRSMFKSVF
                     DQAKAALSA"
BASE COUNT          373 a          478 c          459 g          310 t
ORIGIN      
        1 agcatcgatt tcgccaagaa gaagctgacg atcggctgcg cgctccacac cggcgccgcc
       61 accgatgccg gcgcgtaggt caaagctttg agcgtcatga tcgagccgat cgcgtagaga
      121 aatccggcgc taacgaagca aaccacgctg ctggtggcga ttcgttcggg tttgaactcg
      181 atcttgagta aactgcctaa agtcactagc agcagcaaac ctgtcgcgtg cataaccagc
      241 gcgcccatca ccggcgggcc accgttcgca gtgccgaact ttttcagcac cggcacgatg
      301 ccgtaacaga tcgtcgccat gatcgatgtg acagtgagaa ctttgttccc gtcacgccgg
      361 ctgtcttggg tatcggtctc ggcaataaag aatactccgg aaatgatcaa gccgacaccg
      421 gctaacacgg accaagtcag cggttcaccc agcagcaacc ccgccaacaa cacggtgatc
      481 aatggcgagg agttattgag cgactgcgct cgtgacgcac cgatctgatc gacagtcttg
      541 acgaacagag tgcggccgag ataagcgcca atcactccgg taccggcaaa caccccaatg
      601 gccagcggcg agatgattcc agcgaagagt tcgccttcga ccagcgccgc gacgatcaac
      661 gtgaccagaa tagtagcttg ctggtacagc gtcgcggcgc tcacgtcggc gtgcactagg
      721 ccgcgcttga ccaacaccgg actggttccc caaaaaagac cggcaatgat ggcgtaggtt
      781 attccggttt ccacgtttgg aaattacgcc gacaatgcgg ccttggcctg atcgaagaca
      841 cttttaaaca tcgaccgggt gagcttgccg gtaaacgtgt tctgttggct cggatgatag
      901 gaacagatga gccgaagtcc gtcggcgagt tcatacgagg cgccatggcc gaatttcggt
      961 cgcggtttgg gcaacgagcc gccggtttcg cgataggccg tgagcacaga gtcgaaggct
     1021 atcttgccaa gcacgataac gacttggatg gcgccaaaca gccgcagctc ctcgacgaga
     1081 taaggccggc aacgtttgaa ttcgattaaa ttgggtttat tcgcgggcgg cgcacaatgc
     1141 accgccgcgg tgacgtagca atcggtcagc tttaagccgt cgtttcgatg attggaattg
     1201 ggctggttgg cgaacccagc ctggtaaagt gcgccataaa gccagtcgcc gctacggtcg
     1261 ccggtaaaca tcctgccggt gcgattaccg ccatgggcgg cgggcgccag tccgacgatc
     1321 agcacccgcg ctctgggatc gccgacccct gcaagcggtt tggcccagta atcttcacca
     1381 agatagcggc gcggcggctt tttcgcgcaa gcctcgcgcc aacgcaccaa gcgcgggcac
     1441 ttacggcaac caacgatgcg cgcgttaagt tcatcgacgc ccttcatggt gttactagaa
     1501 tcagtttgaa tactggacgc taacaactgc cgcagttgtt gtcgaatagc tcggcccgca
     1561 gacaacacct atcacaaccg cgcgggagaa tctgcaattt tcgccacctc cgtcaatcgc
//
LOCUS       DATIRS010000035         4276 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_101564, whole genome shotgun sequence.
ACCESSION   DATIRS010000035 DATIRS010000000
VERSION     DATIRS010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4276
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101564"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..554
                     /locus_tag="VLM90_00395"
     CDS             <1..554
                     /locus_tag="VLM90_00395"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ11438.1"
                     /translation="FAAGVLFGAIPLHMVLIHQVAAVNDAGYSKEVAALALGLIGLFT
                     APSMILMGLLADRIGRPRCYALGSASLMLGIAFLMIIGFSQQDWLLYAFPPLIAFGFS
                     SRQSLYPTIAADLFHGKSFGAIIGAIALFIGAGAGIGPWLGGAVYDWTGSYLGAFWLA
                     QILSFLSVCFIGWAARAATPAKI"
     gene            681..1988
                     /locus_tag="VLM90_00400"
     CDS             681..1988
                     /locus_tag="VLM90_00400"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HSQ11439.1"
                     /translation="MHIRAKYVGLWLFALVVMPHSLSAAVIEQLIAVIDGEPYTLTNV
                     STFAKSRLAKSFPSGNLQQINVADREVLEQFITDKLMEAEVREAGIRVTDDDVNHYIE
                     QVKKNNRLSEEDFKASLAREGLNLASYKISVNTEMEKAEILDRQVKRKVNITDEDVER
                     YYKLNSKNYRANERARIRHILLSLPEKAPADQVNAVSAKARELYKRIVAGEDFAAVAR
                     EYSEGAGRADGGDIGWVNKGTLIAGLEEVAFEKLSPGKVSEPFRTSMGMHIVKLEARE
                     AGSVLPLSTVAPKIKQELLTKAREERFAKWLKSDLRRKHRVDVKLAGVTFKPEESKEE
                     TVNALMARSNRPARREPRSALSYLNPMSYIVNETPFEDEDPKSPLSNKSVVSIFGMPL
                     FVTDKADDSPDIFAPPPEEKAGQSKGIFSSIVDSLNPFSSKKP"
     gene            2011..3078
                     /gene="pdxA"
                     /locus_tag="VLM90_00405"
     CDS             2011..3078
                     /gene="pdxA"
                     /locus_tag="VLM90_00405"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: protein motif:HMM:TIGR00557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050570 - 4-hydroxythreonine-4-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HSQ11440.1"
                     /translation="MEIIEQLSLTTLHHCMPYKPIIAVTMGDPSGIGPEIILKALADP
                     MIKRVARPLILGDWGVLQRTRVRRKQPKLICWQPGQRLLPMLDDPKAFTVCSLSALSA
                     RDSRPGVAAKIAGHGTFSYIRVAAKLALSKVADAIATAPLSKNILIDAGYNYPGHTEL
                     FAELGGTPECRMMLIGAKLRVVPVTGHIPFAKVARSLNQENLLKTFALTHTSLKKSFG
                     IAQPRIAVAALNPHGGEKGNFGAEEIDIIAPAVKAARQRGIPVHGPFPADSLFHHAAR
                     GDYDAVVCMYHDQGLIPLKLHHFYGGVALTLGPPFIRTSVDHGTAYDIDGKDKADETS
                     MKEALLLAVRLARQNHRPKKI"
     gene            3075..>4276
                     /locus_tag="VLM90_00410"
     CDS             3075..>4276
                     /locus_tag="VLM90_00410"
                     /inference="COORDINATES: protein motif:HMM:NF014877.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HSQ11441.1"
                     /translation="MNPAVFREYDIRGLAEIDFDKEFALLLGKVHGTMIAETGGTRAT
                     VGRDCRATSDAYADAVIAGLASAGLQVYDLGVCPSPLLYFSLFHLDVDGGIEITASHN
                     PSPYNGFKICLGKDTLYGERIQEIRQKMERGEFRERPGGHVERYEILPPYHQHLLADV
                     PKLARPLKIVVDAGSGVGGPVAPPIFRQLGCQVWEIGCAPDGNFPLHHPDPTVPENLA
                     MLIAKVRKEKADLGVAYDGDADRIGAVDEQGNILWGDELLILFARDMLKRNPGAVVIS
                     EVKCSQRLFDDIAKHGGQPIMWKAGHSLLKAKMKETGALLAGEMTGHMFFNDRYFGYD
                     DAVYASVRLLEILADSGKPLSTLLADLPTSVSTPELRVDCPDDRKFIIADKAAEYFRR
                     HYDVVDIDG"
BASE COUNT          905 a         1213 c         1250 g          908 t
ORIGIN      
        1 cctttgccgc cggcgtgctg ttcggcgcga ttccgctgca tatggtgttg attcaccaag
       61 tggcggcggt caacgacgcc ggctattcca aggaggttgc cgctttggcc ctaggattga
      121 tcggtttgtt cactgcgccc agtatgattc tcatggggtt gcttgccgat cgcatcggcc
      181 gtccgcgctg ttatgctctc ggctcggcct cgctgatgct tggcatcgca ttcttgatga
      241 ttatcggttt ctcacagcag gactggctgc tttacgcttt cccgccactg atcgcattcg
      301 gtttttcgtc gcgccagtcg ctctatccga ccatcgcggc ggatttattt cacggcaagt
      361 cctttggcgc gatcatcggc gccattgcgc tgttcatcgg cgccggcgcc ggcatcggcc
      421 cctggctcgg cggcgcggtg tatgactgga ccggcagcta tctaggggca ttttggctcg
      481 cccagatcct gtcatttctt tcggtctgct tcatcggctg ggcggcacgg gcggcgaccc
      541 cggcaaaaat ttagataatc ggcatcgacg cccgccggtg tttaagccct atacaacggc
      601 aatccctggg gatttgctgg tttggaattc aaaattgact atgttacctt tcagcgagtt
      661 tggcagcggg gatcttgacc atgcacatac gagcgaaata tgtcgggttg tggctgtttg
      721 cgctagtcgt catgccgcat agcctgtcag cggccgtgat cgagcagctg atcgctgtga
      781 ttgatggcga gccttatacg ctcaccaatg tcagcacctt cgcgaaaagt cgcctggcga
      841 aatccttccc gtcgggaaat ttgcagcaga tcaatgtcgc cgaccgcgag gttttagagc
      901 agttcatcac ggacaagctc atggaagcgg aagtgcgcga agccggaatt cgggtcacgg
      961 acgacgatgt caatcactat atcgaacagg tcaagaaaaa taatcggctt tccgaagagg
     1021 atttcaaggc gagtcttgcc cgcgaggggt tgaatctggc gagctataaa atctcggtta
     1081 ataccgagat ggaaaaagcc gagatcctcg accgccaagt caagcgcaag gtcaacatca
     1141 ccgacgagga cgtcgaacgc tactacaagc tcaactcgaa aaactaccgg gccaatgaac
     1201 gggcgcgcat ccggcatatc ttgttgtcct tgccggaaaa agctcccgcc gaccaagtca
     1261 atgccgtgtc tgccaaggct cgggagttgt acaaaagaat tgtcgcaggg gaagacttcg
     1321 ccgccgtggc gcgggagtat tccgagggcg ccgggcgggc cgatggcggc gacatcggct
     1381 gggtgaacaa aggtacgttg atcgccgggc tcgaagaagt tgcctttgaa aagctcagtc
     1441 ccggtaaagt aagcgagccg ttccgcacca gcatgggaat gcatatcgtc aaactggaag
     1501 cgcgcgaagc cggtagtgtc ctgccgctca gtacggtagc gccgaaaatc aagcaagagc
     1561 tgctcaccaa agccagggaa gagcgcttcg ctaaatggct caaatccgat ttgcgccgca
     1621 aacatcgcgt cgatgtcaag ctcgccgggg tgacgtttaa accggaagaa tcgaaagaag
     1681 aaaccgtcaa tgcgttgatg gcgcgttcga atcggccggc gcgccgcgag ccgcgctcgg
     1741 cattgagcta tttgaatccg atgtcctaca tcgtcaacga gacgccattc gaggacgaag
     1801 atcccaagag cccgttgtcg aacaaaagcg tcgttagtat cttcggtatg ccgctattcg
     1861 tcaccgacaa agccgacgat tcgccggata tcttcgcgcc gccgcctgaa gaaaaggccg
     1921 ggcagtcgaa gggaatattc tcgtcgatcg tcgattcgct caatccgttc tcgtcaaaaa
     1981 agccttaatc tcttgcctga ccgttcgtaa gtggagataa tcgagcaact atctctcacg
     2041 acgttgcacc actgcatgcc ctacaaaccg attatcgccg ttaccatggg cgatccgtca
     2101 gggatcggcc cggaaatcat tctcaaggcg ctcgcagacc caatgatcaa gagagtcgcc
     2161 cggccgctga tcttgggcga ctggggcgtg ttgcagcgaa cccgtgtgcg ccgcaaacag
     2221 ccgaaattga tctgctggca gcctggccag aggctgttgc cgatgcttga cgatcccaag
     2281 gcattcacgg tctgttcgct atcggcgctt agcgccagag attcgcgccc cggtgtcgcg
     2341 gccaaaatcg ccggacacgg caccttcagc tacattcggg tggcggccaa gctcgcactc
     2401 tcgaaagtcg ccgatgccat tgccaccgcg cctctgagca aaaacatcct catcgatgcc
     2461 ggatataatt accctggcca caccgaactg ttcgccgagc tcggcggcac gcccgaatgc
     2521 cgcatgatgc taatcggcgc taagctgcgg gtggtgccgg tgaccggcca tattccgttc
     2581 gccaaggtgg cgcgcagttt gaaccaggaa aatctgctaa agacttttgc tttgacgcat
     2641 acaagcttga aaaaatcctt cggcatcgcc cagccgcgca tcgcggtggc ggcgctcaat
     2701 ccccatggcg gtgaaaaagg caacttcggc gccgaggaga ttgacatcat cgcgccggcg
     2761 gtcaaggcgg cgcgccagcg cgggattccc gtgcatggac cgtttcccgc ggatagtttg
     2821 tttcatcatg cggcgcgggg cgattacgat gcggtggtgt gcatgtatca cgatcaaggt
     2881 ttgatcccgc tcaaactgca ccatttctac ggtggcgtgg cactgactct gggaccgcca
     2941 ttcatccgca cctcggtgga ccatggcacc gcctacgata tcgacggcaa ggacaaagcc
     3001 gatgaaacca gcatgaaaga agcgctcctg ctggcagtgc ggctcgcgcg gcaaaaccat
     3061 cggccgaaaa aaatatgaat ccggcggtgt ttcgcgagta cgatattcgc ggtctagcgg
     3121 aaatcgattt cgacaaagag ttcgccctgc tgctcggcaa ggtgcatggc accatgatcg
     3181 ccgaaacagg cggcacgcga gccactgtgg ggcgggactg ccgggcgacc tccgatgctt
     3241 acgccgacgc tgtgatcgct ggcctggcgt cggctggcct gcaggtttac gatcttggtg
     3301 tttgcccgtc gccgttgctc tatttttctc tatttcacct ggatgtcgat ggcggtattg
     3361 agatcaccgc cagccacaac ccgtcgccgt acaatggctt caaaatttgc ctgggcaaag
     3421 acacgctcta tggcgagcgg attcaagaga tccgccagaa gatggagcgc ggcgaatttc
     3481 gcgagcggcc gggcggccat gtggaacgtt atgaaatcct gccgccctat caccaacatt
     3541 tattggctga cgtgccgaag ctggcgcgcc cgttaaaaat tgtcgtcgat gccggcagtg
     3601 gcgttggcgg accggtagcg ccaccgattt ttcgccaatt gggttgccag gtgtgggaga
     3661 tcggctgcgc gccggatggt aatttcccgt tgcaccatcc tgatccgacg gtgccggaaa
     3721 atctagccat gctgattgcc aaagtcagaa aagagaaagc cgatctcggc gtcgcctacg
     3781 acggcgacgc cgaccgcatc ggcgccgtcg atgagcaggg caatattctc tggggcgacg
     3841 agttattgat cttgttcgcc cgggacatgc tcaagcgcaa tcccggagcg gtggtgatct
     3901 cggaggtgaa atgttcgcaa cggctgtttg acgacatcgc caaacatggc ggccagccga
     3961 tcatgtggaa ggccggccat tccttgctca aggcgaagat gaaagagacc ggcgcgctgt
     4021 tggccggcga gatgaccggg catatgtttt tcaatgatcg ctacttcggc tatgacgacg
     4081 ccgtctatgc ctcggtccgt ctattagaga tactcgccga ttccggcaag ccgctgtcga
     4141 cgctgctcgc cgatttgccg accagcgtgt cgacgccgga gctgcgcgtc gattgccccg
     4201 atgacagaaa gtttatcatc gccgacaagg ccgcagaata ttttcgccgg cactatgatg
     4261 tcgtcgatat cgatgg
//
LOCUS       DATIRS010000036         3601 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1871378, whole genome shotgun sequence.
ACCESSION   DATIRS010000036 DATIRS010000000
VERSION     DATIRS010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3601
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1871378"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..301)
                     /locus_tag="VLM90_00415"
     CDS             complement(<1..301)
                     /locus_tag="VLM90_00415"
                     /inference="COORDINATES: protein motif:HMM:NF013843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxynucleoside kinase"
                     /protein_id="HSQ11442.1"
                     /translation="MAKAKYIVVEGPIGVGKTSLARILADEFQSRRLFERVEDNPFLS
                     KFYQSRETYAFQNQTFFLLSRYRQQTELGQQDLFTEGTVSDYLFAKDQIFAALTLS"
     gene            361..1431
                     /gene="nagZ"
                     /locus_tag="VLM90_00420"
     CDS             361..1431
                     /gene="nagZ"
                     /locus_tag="VLM90_00420"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: protein motif:HMM:NF013126.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HSQ11443.1"
                     /translation="MNPLRQKIGQLFLVGCQSDALTSDERLLIEEYQFAGLILFKNNC
                     GAPAQLVSLCRAIWESFDGVPPFIAVDQEGGRVHRLPAPFSHFPAAARIGARNDPALA
                     YRLGRATAAELTLAGINLNFAPVLDVQSNRQSPIIGDRAFAAEPLGVIEIASAWTNGL
                     RDGGIIPCGKHFPGHGDTDKDSHFELPLVRKSLAEIQATELPPFAEACRNQLEALMTA
                     HVVYPALDAKLPATLSEAIITGLLRQQLGFDGVIFSDDLAMRAISDRYGVEEATALAI
                     RAGVDVLLFCHEIYQAVVAFEFLCDEADRDASVRARIEESYRRVMQLKQRYLTSFTGV
                     AENEIAARLERLNHRELLSVFG"
     gene            complement(1635..2978)
                     /locus_tag="VLM90_00425"
     CDS             complement(1635..2978)
                     /locus_tag="VLM90_00425"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HSQ11444.1"
                     /translation="MSVIEKSEELEAYFQTAGKPRERWRVGTEYEKVGVDRSTGQAIP
                     YFGPRGVDRILREMIERYGWEPEEQNGNIIALSRDRTQITLEPGGQIELSGEPCDSIH
                     CTYAEFTQHIRELLEVCEPLGIVFLGLGMQPVSRLDEIQWVPKKRYGIMGPYMPTVGT
                     LGQRMMKQTATVQANIDFLDETDAMVKFRTGMGLAPVLIAMFANSPICDGQVNGYRSY
                     REHIWTDTDKSRQGLLKFAFAPEASFAHYVEYALDVPMYFIIRHHDYINMTGVTFRQY
                     LQYGHNGERATVEDWADHLTTLFPETRIKRYIEVRSVDSQPPELMPALSALIKGAFYD
                     NDCLLAAWDLVKGWTWDERNEVYLDSHANALAARFRRHTLLDLAKEFLEIAAEGLRRQ
                     HVVNDLGNDETIYLEPLKTLLSQGKCPADVILEKWHGELHRDVRKLIDFTAYKLP"
     gene            complement(2965..>3601)
                     /gene="mtnA"
                     /locus_tag="VLM90_00430"
     CDS             complement(2965..>3601)
                     /gene="mtnA"
                     /locus_tag="VLM90_00430"
                     /EC_number="5.3.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF004326.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046523 -
                     S-methyl-5-thioribose-1-phosphate isomerase activity
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="S-methyl-5-thioribose-1-phosphate isomerase"
                     /protein_id="HSQ11445.1"
                     /translation="NKMIGRYGVPLLRDAKRIMTHCNAGALATAGYGTALGVLRALKE
                     AGRQFEVFVNETRPFLQGARLTAWELKQEKIPATLVTDNMVGYLMQQGRVDAVVVGCD
                     RVAANGDVANKIGTYTVAVLAKRHAIPFYVAGPTSSIDIDCPAGKDIPIEQRDGKEVS
                     HIFGKALAPKGTKVFNPAFDVTDHELVTAIITERGVINPPYRQKIRSHVSH"
BASE COUNT          720 a         1057 c         1054 g          770 t
ORIGIN      
        1 tgctcagcgt caaagcggcg aagatctggt ccttggcaaa cagatagtcc gaaaccgtgc
       61 cctcggtgaa taaatcctgc tgcccgagct cggtctgctg gcgataacgg ctcaacagaa
      121 agaacgtctg gttttggaac gcgtaggttt cccgcgactg gtagaacttc gacaaaaacg
      181 gattgtcttc gacccgctcg aagagccggc gcgactgaaa ctcgtcggcg agaatcctgg
      241 ccagactggt cttgcccaca ccgatcggcc cttcgaccac tatgtatttc gccttggcca
      301 tggaatgaat gaatttacac gttggtcgga agcttgtcta ggttataatg acacagcgat
      361 atgaacccac tacggcaaaa aatcggccaa ctgtttctcg tcggctgtca aagtgacgct
      421 ctcactagcg acgaacggtt gctgatcgaa gagtatcagt tcgccggcct aatcctgttc
      481 aagaataact gcggcgcgcc ggcgcagctg gtatccttat gccgcgccat ctgggaatcc
      541 ttcgatggcg tgccgccctt catcgccgtc gaccaggaag gcggccgcgt ccatcggttg
      601 ccggcgccgt tcagccattt ccccgccgct gcgcgcatcg gcgcgcgcaa cgatcccgcg
      661 ctcgcctacc gactgggccg ggcgactgcg gcggagctga cgctggcggg cataaattta
      721 aacttcgcgc cggtgctcga tgtccagtcg aaccggcaaa gtccgatcat cggcgaccgc
      781 gccttcgccg ccgaacccct gggcgtgatc gaaatcgcct cggcctggac caacgggctg
      841 cgcgatggcg gcatcattcc ttgcggcaaa cattttcccg gccatggcga caccgacaaa
      901 gattcgcact ttgagttgcc cctggtgcgc aagtcgctgg cggagattca ggccaccgaa
      961 ctgccgccct tcgccgaagc ttgccgaaat caacttgaag cgttgatgac cgcccacgtc
     1021 gtctatccgg ccctcgatgc gaagctgccg gcgactctgt ccgaagcgat tatcaccggt
     1081 ctgctacgtc aacagttggg ttttgacggg gtgattttca gcgacgattt agccatgcgg
     1141 gcgatcagcg accgctacgg cgttgaagaa gccaccgccc tggcaatccg cgccggcgtc
     1201 gatgtcctgc tgttctgcca tgagatctac caagccgtcg tcgcctttga atttctctgc
     1261 gatgaagcgg accgcgacgc gtcggtgcgc gcgcgcattg aagaaagcta tcggcgggtc
     1321 atgcaactca agcagcgata tttgaccagc ttcaccggcg tggccgagaa cgaaatcgcg
     1381 gcgcggctgg agaggttaaa ccaccgagag ttgctcagtg tcttcggctg agccggggat
     1441 actttctaac tggcgaaccc tgccatttgt catgccggtc cttcgacatg tcttcggata
     1501 aactccggcg ggcagccagg tgacgaaccg tgtccgtcat accgttgaag aacggtatcc
     1561 aggtggatga tgggtctgga ttccggccta cgccggaatg acggaaaaga aacagaattc
     1621 actttgcccg atattcacgg cagcttgtaa gcagtgaagt cgatcaattt tctgacgtca
     1681 cggtgcagct cgccgtgcca tttttctaaa atcacatcgg ctggacactt gccctgggac
     1741 aagagagtct tgagcggctc gagataaatc gtttcatcgt tacctaagtc attgacaaca
     1801 tgctggcggc gcaatccctc cgcggcgatt tccaaaaatt ccttggcgag gtcgagcagg
     1861 gtatggcgcc ggaaacgtgc cgccagcgcg ttggcatggg aatcgagata aacttcgttg
     1921 cgttcgtccc aagtccagcc tttgaccaga tcccacgccg ccagcaagca gtcgttatca
     1981 tagaaggcgc ctttgatcag cgccgacagc gccggcatca attccggcgg ctggctatcg
     2041 acggagcgga cttcgatgta gcgtttgatg cgagtctcgg gaaacagcgt ggtcaggtga
     2101 tcggcccaat cttcgacggt ggcgcgctcg ccgttgtggc catactgcaa atactggcga
     2161 aaggtcacgc cggtcatatt gatatagtcg tggtggcgaa tgatgaagta catcggcacg
     2221 tcgagggcat actcaacata gtgggcgaaa gacgcttccg gcgcgaaggc gaatttcagc
     2281 aagccttgcc ggctcttgtc ggtgtcggtc cagatatgtt cgcggtagct gcggtagccg
     2341 ttcacctggc cgtcgcagat cggtgagttg gcgaacatgg cgatgagcac cggcgccagc
     2401 cccatgccgg tgcgaaattt caccatcgca tcagtctcgt cgaggaaatc gatattggcc
     2461 tgcaccgtgg cggtctgctt catcatgcgc tggcccaagg tgccgacggt cggcatatac
     2521 ggtcccatga tgccatagcg ctttttcggc acccactgaa tctcgtccaa gcggctgacc
     2581 ggctgcatgc cgagaccgag aaaaacaatg ccgagaggct cgcagacttc caacagttcg
     2641 cggatatgtt gggtgaattc ggcataggtg cagtgaatgc tatcgcaggg ctcgccgctg
     2701 agctcgatct ggccgcccgg ttctaaagtg atctgcgtcc gatcgcggct gagcgcgatg
     2761 atgttgccgt tttgctcttc cggctcccag ccgtagcgct cgatcatttc ccgcaggatg
     2821 cgatcgacgc cgcgtggacc gaagtaggga atcgcctggc cggtgctccg gtcgacgccg
     2881 actttttcgt actcggtgcc gacgcgccag cgttcgcgcg gtttgccggc ggtctgaaag
     2941 taggcttcga gttcttcgga tttctcaatg actgacatgg ctgcgaatct tctgtcggta
     3001 gggaggattt atcactccgc gttcggtaat gatagccgtg acgagctcgt gatcggtcac
     3061 gtcgaatgcc ggattgaata ccttcgtgcc cttgggcgcc aacgctttgc caaaaatatg
     3121 cgacacctct ttgccatcgc gctgctcgat gggaatatct tttccggccg gacaatcgat
     3181 atcgatcgac gaggtcggcc cggcgacgta gaagggaatg gcgtggcgct tggctaacac
     3241 ggcgaccgtg taagtgccga tcttattggc gacatcgcca ttggccgcca cccgatcaca
     3301 gcccaccacc accgcgtcga ctctcccctg ctgcatcaag taaccgacca tgttatcggt
     3361 caccagcgtc gccgggattt tctcttgctt gagttcccag gcggtcagtc tagcgccctg
     3421 gagaaacggc cgggtctcgt taacgaaaac ttcaaactgc cggcccgcct ccttcagcgc
     3481 gcgcaagacg cccagggccg tgccataacc ggcggtggcg agggcaccgg cgttgcagtg
     3541 ggtcatgatc cgtttggcgt cgcgcaagag cggcacgcca taccggccga tcattttgtt
     3601 g
//
LOCUS       DATIRS010000037         1921 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1379893, whole genome shotgun sequence.
ACCESSION   DATIRS010000037 DATIRS010000000
VERSION     DATIRS010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1921
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1379893"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(342..542)
                     /locus_tag="VLM90_00435"
     CDS             complement(342..542)
                     /locus_tag="VLM90_00435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11446.1"
                     /translation="MKHKERLAYKPTPTASVATSMLDLLSRSSPQGASATPEGLIETR
                     FVNEPERAGFLRRDEPTVWQVG"
     gene            complement(539..1789)
                     /locus_tag="VLM90_00440"
     CDS             complement(539..1789)
                     /locus_tag="VLM90_00440"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ11447.1"
                     /translation="MTTHPSHLSLFRQRDFCVFWTGSFLSSMGTQFTTVAMAWQIYEL
                     TNSAMQIGLLGLARALPQIVLLLVGGLLADAMDRRKLMMCTQTGLFCISTTLALLTYF
                     GKASPHILYAATMLLAIFTSLEQPSRQSMIPNLVPRDHLTQALALQGTQRYVPVIAGP
                     SLAGVVLAFSGPAACYAVDACSWLAMLSALRMLRTKIPEGGGWKSVSLASLREDWAFV
                     WSHSVIFPLMLLDFSATFFGNARGLFPIFVRDILFVGPAGLGLLYAARAVGSLLAAIG
                     MTLLGPVRRGGRWIVIGIGIYGLSTALFARSQLFWFSIIMLTLTGAGDTISSILRSTI
                     NQLSTPDELRGRMSSINSIFTSNGPQLGQFESGLVAAWLGAQMSALTGGLATLMILAA
                     VTAGYPVLRRYRIPQGGLTEERPR"
BASE COUNT          448 a          533 c          591 g          349 t
ORIGIN      
        1 ggaagagaaa cgacgcttaa ccacatgggg cctagcgcgg caccgctgca accgaagaag
       61 ataaaagatt tagccgcata gaacatagcg cagcagagcc gcaaccaaat gggaaagagt
      121 tttcaccacg gagctcacga aggacacgaa gggttcgaaa aattattact ccgaacttcg
      181 tgctcttcgt atccttcgtg gtgagattgg atttcttcat tgagcacggc aacttaggag
      241 taccggaaaa tttgcgcaag ccacgcaatc tttgagctat tgcagtgcaa agttcgcaaa
      301 aacaatagga tttgtcggag cgggtttcaa agccgccctg tttaacctac ttgccatact
      361 gtcggttcat ctcttcgaag aaagccggcc ctttccggtt cgttaacgaa gcgggtttcg
      421 attaagcctt ccggggtggc gctggcgcct tgagggctgg agcgcgacag cagatcgagc
      481 atcgacgtcg cgacactcgc cgtgggcgtc ggtttatacg ccagccgttc tttatgcttc
      541 atcgtgggcg ctcctctgtc aagccaccct gaggaatccg atagcgccgc agcacaggat
      601 atccggccgt caccgccgcc agaatcatca gcgtcgccaa gccgccggtg agcgcggaca
      661 tttgggcgcc gagccaagcg gcgacgagac cggattcgaa ttggccgagc tgcggtccat
      721 tgctggtgaa gatgctgttg atcgacgaca tgcggccgcg caattcgtcg ggcgtgctta
      781 actggttgat ggtcgagcgc aggatcgaac tgatggtgtc gccggcgccg gtgagtgtga
      841 gcatgattat ggaaaaccaa aatagttgcg accgagcgaa cagcgcagtg gacagaccgt
      901 agattccgat gccgatgacg atccagcggc cgccccgtct taccgggcca agcagtgtca
      961 tgccgatggc ggcgagcagc gagccgacgg cacgagcggc atagagtaat ccgaggcctg
     1021 ccggcccgac gaaaaggatg tcgcggacga agatcgggaa taatccgcgc gcgttgccaa
     1081 agaacgtcgc gctgaagtcg agcagcatca gcggaaaaat cacgctgtgc gaccagacga
     1141 aagcccagtc ttcgcgcaac gacgccagcg aaacgctctt ccagccgccc ccttcaggga
     1201 tcttggtgcg gagcatacgc aaggccgaga gcatcgccag ccaagagcag gcatcgacgg
     1261 catagcaggc ggcgggaccg gagaaggcga gaaccacgcc ggcgagcgac ggtccggcga
     1321 tcaccggcac gtagcgctgc gtgccttgca gcgccaacgc ttgggtcaaa tggtcgcgcg
     1381 gcaccaagtt gggaatcatc gattggcgcg acggctgttc cagcgacgtg aagatcgcca
     1441 gcagcatggt cgcggcgtaa agtatatgcg gcgaagcttt gccgaaataa gtgagtagcg
     1501 ccagggttgt cgagatgcaa aacagaccgg tctgtgtgca catcatgagc ttgcgccggt
     1561 ccatggcgtc agcgagcagg ccaccgacca gcagcaagac gatctgcggc aaagcgcggg
     1621 ctaagcctag caggccgatt tgcatggctg aattggtcag ctcgtagatc tgccacgcca
     1681 tcgccaccgt ggtgaactgc gtgcccatgc tggagagaaa cgaaccggtc cagaagacgc
     1741 aaaaatcccg ctggcggaat aacgagaggt ggctcgggtg tgtggtcatg ttgtgaaact
     1801 tcgctgtcaa tttttatctc aatgatcggc caacgacaaa ccgccgcgcg ccgcgctagc
     1861 gacctatgct tagcgcttga cgcctcggct cgactggaac tattgtcctt agggtgctcc
     1921 a
//
LOCUS       DATIRS010000038         2537 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_396718, whole genome shotgun sequence.
ACCESSION   DATIRS010000038 DATIRS010000000
VERSION     DATIRS010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2537
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_396718"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..218)
                     /locus_tag="VLM90_00445"
     CDS             complement(<1..218)
                     /locus_tag="VLM90_00445"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HSQ11448.1"
                     /translation="MLSYDVVQWGKPLEKIERATPVAKGTEVLVQLKYCGVCHSDVHI
                     RDGYFDLGGGNRLHMSERGMAPPVTLGH"
     gene            complement(300..677)
                     /locus_tag="VLM90_00450"
     CDS             complement(300..677)
                     /locus_tag="VLM90_00450"
                     /inference="COORDINATES: protein motif:HMM:NF019032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1499 domain-containing protein"
                     /protein_id="HSQ11449.1"
                     /translation="MGVKDGHLFPCPASPNCVSSDAPDTAHSVAPFRLIVPPTDGWRA
                     VQAALDGLPRTKMVIAADDYLHVECSSAVFGFVDDLELHLRPAEKLIAVRSASRLGHS
                     DFGVNRKRVEQLRSLLIKQGLVR"
     gene            complement(786..1136)
                     /locus_tag="VLM90_00455"
     CDS             complement(786..1136)
                     /locus_tag="VLM90_00455"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HSQ11450.1"
                     /translation="MSDHFHDENDLKLMREMRKLAPDDYNAWLGLEKTVGRDGGAIPR
                     KYRELIAIAVSATTQCPYCMEAHAKAAHAAGATREEVVEASFIAAALRAGAAATHGAM
                     ALKFFDKQTEQKKE"
     gene            1289..2347
                     /locus_tag="VLM90_00460"
     CDS             1289..2347
                     /locus_tag="VLM90_00460"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HSQ11451.1"
                     /translation="MLSGALSAVYRTFGIKRSPRNPNICTRCSTHVEEGRMVEITVLF
                     ADLSSFTEMTQDLGAEKTHEVVDAFLRMATEVLVKHGAFIDKYVGDAVMALFNVPLRH
                     DDHALRAVTSATELSMALKTLGVHFGLNLKASIGIATGFARVGRLGSDDSKDYTAIGD
                     VVNLAARLQSKASAGEVLISEESYRKHAANFAAATSEQVMLKGFRDPVSAYRLLGDNA
                     TRLIGDPPEHSPAKATSVGAIIFGILGAPCAVVTLIGPLAVALGAGSVFGLAGLLTFL
                     DQSLLRVPVLALTTLAAIANLYTLSHARKLRIDAEVPAQLKTMTSLEKRRTTFVLAAS
                     VVTLGIVAFEVVAHMLLH"
BASE COUNT          519 a          805 c          703 g          510 t
ORIGIN      
        1 tcatgcccca aggtcaccgg cggcgccatg ccgcgctcgc tcatgtgcaa ccggttgccg
       61 ccgccgagat cgaagtagcc gtcccgaata tggacgtcgc tgtgacacac accgcagtac
      121 ttgagctgga cgagcacttc cgtgcccttc gccaccggcg tcgcgcgctc gatcttttcg
      181 agcggcttgc cccattggac aacatcgtag ctcagcatgt caggtactca catcggatat
      241 cactcaagct cgcgccgcaa ctgatcgatc ttttgcgatt tccatcgcct catcaaacct
      301 caacgcacca ggccttgctt gatcagcagc gagcgaagtt gctccacccg cttgcgattg
      361 acgccgaagt cgctgtgacc gaggcgcgac gccgaacgca ccgcgatcag cttctccgcc
      421 ggccgtaggt gcagttcgag atcgtcaacg aagccaaata ccgcgctgct gcactcgacg
      481 tgaagatagt cgtccgccgc aatgaccatt tttgtacgcg gtagtccgtc gagagcggct
      541 tgaaccgcgc gccagccatc cgttggcggc acaatcagcc gaaacggcgc caccgaatgg
      601 gcagtgtcgg gcgcatcgct cgacacgcag ttgggcgacg ccggacaggg aaataagtgg
      661 ccgtctttga ctcccaaatc ggcaggtctg gttccggagc atgaaaatag cggcatagtg
      721 ataacgctcg cggcgagaag cccgagaact tgctgcttca aggtagcgaa cacccgcacg
      781 acggcctatt cctttttctg ctccgtctgc ttgtcaaaaa acttgagggc catggcgccg
      841 tgggttgctg ccgctccggc acgcagcgcc gcagcgataa aagacgcttc gacaacttct
      901 tcccgcgtcg cgccagcggc gtgagccgcc ttggcgtggg cttccatgca gtacggacac
      961 tgggtcgtcg ccgacacggc gatagcaatc aactcgcggt acttacgggg aatcgcaccg
     1021 ccatcgcgcc cgactgtttt ctcgaggccg agccaggcgt tataatcgtc cggcgccagc
     1081 ttgcgcatct cgcgcatcaa cttcaaatcg ttctcgtcat gaaagtgatc cgacattgaa
     1141 aatatcctcc tgagagtcgc cgcattattc ccgtaaacgg cacgcgaagc aatcacattg
     1201 acatcgttgc taaccctaag ttacttcttc tcctatgcac gatcattcgc gcccgcaact
     1261 ggcggcacaa tgcagcgtct gcggcaccat gctgtccggt gcgctgagcg ccgtctaccg
     1321 caccttcggc atcaaacgga gcccgcgcaa tccaaacatc tgcacccgct gcagcaccca
     1381 tgtcgaagaa gggagaatgg tggaaatcac cgtgctgttc gccgacctgt cgtcgttcac
     1441 cgagatgacc caagatttgg gcgcggaaaa gacccacgaa gtcgtcgatg cgtttttacg
     1501 catggccacc gaagtgctgg tcaagcatgg cgcgttcatc gacaaatatg tcggcgacgc
     1561 ggtcatggcg ctgttcaacg tgccgctccg tcacgacgac catgctctgc gtgcggtcac
     1621 ctcggcgacc gaattgagca tggcgctaaa aactctcgga gtgcattttg gcttaaacct
     1681 gaaggcgtcc atcggcatcg ccaccggttt cgctcgcgtc ggccgcttgg gttccgacga
     1741 ctcgaaggac tacacggcga tcggcgacgt ggtcaatctg gcggcgcgcc tgcaaagcaa
     1801 agccagcgcc ggcgaagtgc tcatcagcga ggaaagttat cgaaagcacg ccgcgaactt
     1861 cgccgcggca acttccgaac aagtcatgct caagggtttt cgcgatccgg tttccgccta
     1921 tcgtctgctc ggcgataacg cgacacgctt gatcggcgat ccacccgagc attcgccagc
     1981 caaggcgacc agcgtcggcg cgatcatctt cggcatcctt ggcgcgccct gcgccgtggt
     2041 cacactgatc ggaccattgg cagttgcgtt aggagccggc agcgtgttcg gcttagccgg
     2101 cctgctgaca ttcctcgacc aaagcctgtt gcgcgtgcct gtgctcgcgc tcacgacact
     2161 cgccgctatc gccaatctct acacattgtc ccatgccaga aagctgagga ttgacgccga
     2221 agttccagcc cagctaaaaa ccatgacgag cttggaaaag cggcgcacga ccttcgtgct
     2281 cgccgcctcg gtcgtcaccc tcggaatcgt cgccttcgaa gtcgttgcgc atatgctgct
     2341 gcattgagtt ctaatcccgc gaagggcagc aaaatcaaag gcccacagct gcgggccttt
     2401 gacgtggttc tacagttgcc ggcgaatgat tattttttgt aactatcggg atcgaacgcc
     2461 tcgccgttga aagtgaagtg gcgcgtcacc ggcgtcggat tcaggatcgt ctgcatgatg
     2521 taacaacccg cttcggc
//
LOCUS       DATIRS010000039         1573 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_101706, whole genome shotgun sequence.
ACCESSION   DATIRS010000039 DATIRS010000000
VERSION     DATIRS010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1573
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101706"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1573)
                     /locus_tag="VLM90_00465"
     CDS             complement(<1..>1573)
                     /locus_tag="VLM90_00465"
                     /inference="COORDINATES: protein motif:HMM:NF023478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3536 domain-containing protein"
                     /protein_id="HSQ11452.1"
                     /translation="SYGHHHRYGDMALAYALDQIETKKLARLTNYGEFLEKHPPTHEV
                     EIAEKTSWSCAHGIDRWWSDCSCNSGAHPDWRQQWRTPLRNALDSLRDTVTPLWKQQA
                     TDYFKNIWFARDTYIEVILDRSEDFRERFLARHAARPLRDDEKVTALKLLELQRQLLL
                     MYTSCGWFFDDISGIETVQVLQFAGRAVQLAQELFGDSLEERFIERLGAAHSNLPDQG
                     DGKRIYEQRVRPARVDWERVGAHYAVSSLFESIPEQTKIYCYRAERKNLQTYVAGNAK
                     LAVGEVELTSEITGETTCLSFGALHLGDHNVNAGVRPSLGDNVDSYLARELAEPFMRG
                     DFPTVLRLMDRRFGESNYSLRSLFHDEQRKLIGQILQSALGETESLYRQIYDHRAPLL
                     RFLHSLDLPQPSALRGPAESVINSDLRRQLEQDEIDTDQLKQLLAAATAEGIALDCAT
                     LEFTYRKNLERNAEVFASQPSLTGLQSLNRAATAIAMLPFTVNLWKVQNLLYRFSQHF
                     STDNPQASQWHAADRD"
BASE COUNT          305 a          430 c          490 g          348 t
ORIGIN      
        1 gtcccgatcg gcggcgtgcc actggctggc ctgtggattg tcggtgctga agtgctggct
       61 gaatcggtag agcaaatttt gcactttcca caaattgacc gtgaatggca gcatggcgat
      121 cgccgtggcg gctcggttca agctctgcag gccggtgagt gacggttggc tggcgaaaac
      181 ttccgcgttt cgttcgaggt ttttccggta ggtgaattcc aacgtcgcgc agtcgagcgc
      241 gatgccctcg gcggtcgccg cggcgagtaa ctgtttcaac tggtcggtgt cgatctcatc
      301 ctgctccaat tggcggcgca ggtcgctgtt aatgaccgat tccgctggcc cgcgcagcgc
      361 gctcggttgc ggcaagtcca agctatgtaa aaagcgcaat agcggggcgc ggtggtcgta
      421 gatttgccgg tagagcgact cggtttcgcc tagggcggac tgcaagatct ggccaatcag
      481 tttgcgctgc tcgtcgtgaa acagcgagcg cagcgagtag ttcgactcgc cgaagcggcg
      541 atccatcaga cgcaggactg tcgggaaatc accgcgcatg aagggctcgg cgagctcgcg
      601 ggcgagataa ctatcgacgt tgtcgccaag ggatgggcgc acaccggcgt tgacgttatg
      661 atcgcccagg tgcagcgcgc cgaaactcag acaggtggtt tcgccggtga tttccgaggt
      721 cagttcgact tcaccaaccg ccagcttggc gttgccagcg acataggtct ggaggttctt
      781 tcgctcggcg cggtagcaat aaatttttgt ctgctctggt atgctttcga acagcgaact
      841 gacggcataa tgagcgccga ccctctccca gtccacacgc gcgggccgga cccgttgctc
      901 gtagatccgt ttgccgtcac cctggtcagg caggttgctg tgcgcagcgc cgagccgctc
      961 gataaagcgt tcttccagcg agtcgccaaa aagttcttga gctaactgga cggcacggcc
     1021 ggcgaactgg aggacttgga cggtctcaat gcccgagatg tcgtcgaaaa accagccgca
     1081 gctcgtgtac atgagcaaca gttgcctttg tagttcgagc aacttgaggg cggtgacttt
     1141 ctcatcgtcg cgcaaaggcc gggcggcgtg gcgggcgaga aatcgttctc taaaatcttc
     1201 cgagcgatcg aggatcactt caatatacgt atcccgagca aaccaaatat ttttaaaata
     1261 atccgtggct tgttgcttcc acagcggtgt gaccgtatcg cgcaggctgt cgagagcgtt
     1321 gcgcagcggc gtgcgccact gttgacgcca atcaggatgc gcgccggagt tgcaactgca
     1381 atcgctccac cagcggtcga tgccgtgggc gcaactccag gaagtttttt cggcgatctc
     1441 gacttcgtgg gtgggcggat gtttttcgag aaactcaccg tagttggtca aacgcgccag
     1501 ctttttggtt tcaatctggt ccagggcgta ggccagcgcc atgtcgccat agcgatgatg
     1561 atggccataa ctc
//
LOCUS       DATIRS010000040         1554 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_888381, whole genome shotgun sequence.
ACCESSION   DATIRS010000040 DATIRS010000000
VERSION     DATIRS010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1554
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_888381"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(309..1430)
                     /locus_tag="VLM90_00470"
     CDS             complement(309..1430)
                     /locus_tag="VLM90_00470"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11453.1"
                     /translation="MAIPFRADNIGSLLRPAELLEARAALRDGRMDERQVREIEDRAI
                     LQALAMQKATGVDVFTDGEYRRDIFTADITKAMDGLVPGKPVVKFEWRGRGKELAAES
                     KEGNLQYIVGAKLTRKGRFTPNEAPFLKQHAPGPFKVCTPAAMQHAIMRYRPGVSDKF
                     YPTVHDMLQDVAAIMRQEVQALIDEGASYVQLDAPSYSNFFDQSRRAVLTQSGIDLSE
                     ALDAAIAADNAMIDGVKRNSDVAIGIHFCRGNKRSAWGAEGGYEPIAEKAFGSLKMDR
                     YLLEFDSDRAGGFEPLRFVPKGKTVVLGLITTKEPELESADELMRRIEQAQKYVAVEN
                     LALSTQCGFASAASGNLITWDDMQRKLELVAKMARRVWG"
BASE COUNT          316 a          512 c          379 g          347 t
ORIGIN      
        1 cggactcctg aggcaacggc cccacaaggt ctccggcaat tgcaaatcgg cgctgtactg
       61 cgcctgcccc gtcactttcg ccacgccctc cactctcggt gtcgatcttc ccacaacctg
      121 cgtcatttat tttcctccac aatagaattc ttcgcggcat tgctgccttg cagacttttt
      181 aaaccggaac ccgacaactt gtccagcgct tcatgcggaa actctaaaac cgctttgcgc
      241 gtttgaagac gcttgattca ctctccgaac cttgaacttt tgaaccttga acccttgaac
      301 gaaataattt acccccacac ccgccgcgcc atcttagcga cgagctccaa cttccgctgc
      361 atatcgtccc aggtaatcaa attcccggac gccgccgagg cgaaaccgca ctgggtgctg
      421 agagcgagat tctccaccgc cacatacttt tgcgcctgct cgatgcggcg catcagttca
      481 tctgcggatt cgagttccgg ctccttggtc gtgatcaagc ccaacaccac ggtcttgccc
      541 ttgggcacga aacgcaacgg ctcgaagccg ccggcccggt cgctgtcgaa ctccagtaaa
      601 tagcgatcca tcttgagtga gccgaaggcc ttctcggcga tcggttcgta accgccctcg
      661 gcgccccagg cgctgcgctt gttgccacgg cagaagtgaa tgccgatggc gacatcgctg
      721 ttgcgcttaa cgccgtcgat catggcgttg tccgccgcga tggcggcatc gagcgcctca
      781 gacaaatcga tgccgctctg ggtcaacacg gcgcgccggc tctggtcgaa gaagttggaa
      841 taggacggtg catccaattg cacataggat gccccctcgt cgatcagcgc ctgcacttct
      901 tggcgcatga tcgccgcgac atcctgcagc atgtcatgca ccgtcggata gaacttatcc
      961 gacacccctg gccgatagcg catgatcgca tgctgcatcg ccgccggcgt gcacaccttg
     1021 aacggcccgg gcgcatgttg tttcaagaat ggcgcctcgt tgggtgtgaa acggcctttt
     1081 ctcgtcagct tggcgccgac gatgtattgg agattgcctt ctttcgattc ggcggctaac
     1141 tctttacctc tgccgcgcca ttcgaacttg actacaggtt tgccaggcac cagcccatcc
     1201 atcgccttgg tgatatccgc ggtaaaaata tcccgccgat actcgccgtc ggtaaagaca
     1261 tcgacgccgg tagctttttg catcgccaac gcctggagga tcgcacggtc ttcgatctcc
     1321 cgcacctgcc gctcatccat gcgcccgtcg cgcagcgccg cccgcgcttc aagcaactcc
     1381 gccggccgca acaaactgcc gatattatcc gcccgaaatg gtatcgccat aaattagact
     1441 cccttccgag gctgaactgt tgaacccgta tcgttcaaca gttcaaaggt tcaaccgttc
     1501 aacgtccgaa tccgaaacca accttgaaat ttttgaacct ttgaaccttg aacg
//
LOCUS       DATIRS010000041         3250 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1773370, whole genome shotgun sequence.
ACCESSION   DATIRS010000041 DATIRS010000000
VERSION     DATIRS010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3250
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1773370"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(214..459)
                     /locus_tag="VLM90_00475"
     CDS             complement(214..459)
                     /locus_tag="VLM90_00475"
                     /inference="COORDINATES: protein motif:HMM:NF015947.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HSQ11454.1"
                     /translation="MEIVLKLNEKSQIVISKQMRQALGLKPGDQLAAVVESDRIILRP
                     KPKNPAARLRGIGKGAWGDRTKIDAYLDKLRDEWQHT"
     gene            732..2420
                     /locus_tag="VLM90_00480"
     CDS             732..2420
                     /locus_tag="VLM90_00480"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ11455.1"
                     /translation="MYDLILKGGRIYDGSGLPSFNGDVAIRDGKIAAIGRINEAADRV
                     LDVGGLAVAPGIIDFHTHFDAQLWWDPLASSSNEHGVTTVVTGNCGLTLAPCKPESRD
                     ALIGTFVRVEAMPRASLQAGIPWQWTTHAEFLNALERRPLGLNVATLIGHCAVRQHAM
                     GEASVEREAKNSEIAAMEESVRQAMAAGAFGFSTNSNQSHYREDGKPVASRFSSLEEI
                     ARLCRVVGESQRGLVQFTHGAFATPEHVAHISQWYDTILQETRRPLIGESIRHRWSEP
                     ELWRKQLHDVEARARQGYAAYAMTSTRRSMRRWTLKDGARLDIIPAWKKLSALPIAKR
                     MEKLRDANLRAELAEETVDGKPIDFSRRWDLIGVNKAARKENQSLEGKSIAEIATAQH
                     KSPIDAMLDLALAEDLETTFEDSTTQGDEQAVKEIFCNPNVLLGQSDAGAHVASGNPG
                     FGYATLMLAYWVRERKLMTLEDAIKKLTFLPASIFGIHDRGLLRRGLAADIFVFDPER
                     IDLATPAKVNDLPEGAPRFVQGAKGIHYTIVNGKVLMDNGAHTGAYPGKVLRSS"
     gene            complement(2593..>3250)
                     /locus_tag="VLM90_00485"
     CDS             complement(2593..>3250)
                     /locus_tag="VLM90_00485"
                     /inference="COORDINATES: protein motif:HMM:NF024739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ11456.1"
                     /translation="PEAAAYPEELKGTTWLATDLIYIVPAWNTSKVKKDEEPKQFEDF
                     ADPRWKNRLIAEPRDFQLLLGLAKHKYKNDDKAVALLKRIAANNLEFHKGHSQLAELL
                     VAGQAAACLTCYSHHYPVRKRKGAPVDYMLTEGTGDIDATAIMKSAPHPNTALLFARW
                     SASEEGQKVYALGGRLPAHPKVEPTEKTRPAKVYPVGEDDIKDYPKYEKLWKEIFGLR
                     "
BASE COUNT          679 a          939 c          942 g          690 t
ORIGIN      
        1 ctaccccgcc gacccgcgct ggggcgacag ctatgcgaaa catgtggagg agtttcgcga
       61 gatatttttc aagtaagccg agcggttagg cgcgcgctta acccgaacac aggttcgaca
      121 aggtccgcgt agggcgcaac atcctcgata aaatagatca acggcgcggt gtcgagaccg
      181 acgatttggt gcttttctat agcccggcga aatttaagtg tgttgccatt catcgcgaag
      241 tttgtcgagg taggcgtcga tcttggtgcg atcgccccag gcgcctttac cgataccgcg
      301 caaccgggcc gcggggttct tgggtttcgg ccgcaggatt attctgtcac tctctaccac
      361 cgcggctaat tgatcgccgg gttttagtcc caaggcctgg cgcatctgct tggaaattac
      421 gatttgtgac ttttcgttaa gttttagcac tatttccatc tttgtcaccc attttaatgg
      481 tttcgggtaa aattagcaga tatgggctac tttagcaatt tgtcagcggg agaacggtaa
      541 ggaggctcgt aggtccgaga agattggggt ggcgattaac ttgaaaacga caaagcagat
      601 cggcgtggcg atcctgttcc agcgcgaccg acgcgccgga ctaattttac aattgcgccg
      661 agaacttcgc cgccgtatag tcgcgctgtt cgtgtgaacc ggtctaagca tcctatacat
      721 gaggtgcggc aatgtatgac ttgattctca aaggcgggcg catctacgac ggctccggct
      781 tgccgtcgtt caatggcgac gtggcgattc gcgacggcaa gattgccgcc atcggtagaa
      841 tcaacgaagc ggctgaccgc gtgctcgacg ttggcggttt ggccgtcgcg cccggaatca
      901 tcgattttca cactcacttc gatgcccagc tttggtggga cccgctcgct tcatcatcga
      961 atgaacatgg cgtcaccacc gtggtcaccg gcaactgcgg cttgacgctg gcgccgtgca
     1021 aaccggagag ccgagatgcc ttgatcggca ctttcgtgcg cgtcgaagcg atgccgcggg
     1081 cgagcctgca agcgggcatt ccctggcagt ggacgacaca tgcggaattt ctcaacgcgc
     1141 tcgagcgccg gccgctcggc ttgaacgtcg cgacgctcat cggccactgc gccgtgcgcc
     1201 aacatgccat gggcgaagcc agcgtcgagc gcgaagccaa gaacagtgaa atcgccgcga
     1261 tggaggaatc ggtccgccaa gctatggcgg ctggcgcctt cgggttttcg acgaactcga
     1321 accaaagcca ctatcgcgaa gacggcaagc cggtggcaag ccgattctcc agcttggaag
     1381 aaatcgcccg cctgtgccgc gtcgtcggcg agtcccagcg cggcttggtg caattcaccc
     1441 atggcgcctt cgccacgccg gagcatgtcg cgcacatcag ccaatggtac gacacgattc
     1501 tacaggaaac ccgccggccg ttgatcggtg aaagcatccg ccaccgttgg agcgaaccgg
     1561 agctatggcg caagcagttg cacgacgtcg aagcgcgtgc ccgtcagggc tacgccgcct
     1621 acgccatgac cagcacgcgc cgatcgatgc gccgctggac gctcaaagac ggcgctcgtc
     1681 tcgatatcat cccggcttgg aaaaaacttt cggcgttgcc gatcgccaaa cgaatggaga
     1741 aactgcgcga tgccaacctg cgcgcggaac tggcggaaga aaccgtcgat ggaaaaccga
     1801 tcgatttctc gcgccgatgg gatttgatcg gcgtcaataa agcagcgcgc aaagaaaatc
     1861 aaagtctcga aggcaagagc atcgcggaga tcgccaccgc gcagcataag tcgcccatcg
     1921 atgccatgct cgatctcgcc ctggcggaag atttggaaac cactttcgaa gactcgacga
     1981 cccagggcga cgagcaagcg gtcaaagaaa tcttctgtaa ccccaacgtc ctgctcggcc
     2041 agtccgacgc cggcgcccat gtcgccagcg gcaatcccgg tttcggctac gcgacgttga
     2101 tgctcgccta ttgggtgcgc gagcgaaagc taatgacact cgaagacgcc atcaagaaac
     2161 tcacgttctt gccggcgtcg atcttcggca ttcacgaccg cggcctgctg cgccgcggcc
     2221 tggccgccga catatttgtc ttcgatcctg agaggataga cttagccacg ccggcaaaag
     2281 tcaatgatct ccccgaaggc gcgcctcgtt tcgttcaagg cgccaaggga attcattaca
     2341 cgattgttaa cggcaaagtg ctcatggata acggcgctca cactggcgcc tatccgggaa
     2401 aagtcctgcg gagttcgtga agacgaagat aattttctcg caaaggcgca aagacgctaa
     2461 ggtgacgggc gatgcccgtc atcccgaggg aacacgaggg atctagatta ctcccttcgg
     2521 tcgaaatgac aacgattccg aacttcgcgc ctttgcgcct ttgcgggaga tcctccgatt
     2581 tttgggttca gctcagcgca gcccaaaaat ctctttccac aacttctcat acttcgggta
     2641 atctttgatg tcgtcttcac cgaccgggta aactttcgcc ggccgggttt tttccgtcgg
     2701 ctcgactttc ggatgggccg gcaatctgcc gccgagagcg taaacttttt ggccttcttc
     2761 gctcgccgac cagcgggcga atagcagcgc ggtattggga tgcggcgcac ttttcataat
     2821 cgccgtggcg tcgatgtcgc cggtgccttc ggtcagcatg tagtccaccg gcgcgccttt
     2881 gcgtttgcgc accggataat ggtgcgaata gcaggtcaaa caggcggcgg cctgtccggc
     2941 gaccaacagc tcggccaact gcgaatggcc tttgtgaaat tccagattgt tggcggcgat
     3001 gcgcttgagc agcgccacgg ccttgtcgtc gtttttgtat ttgtgcttgg ccaggccgag
     3061 cagcaattgg aaatcccgcg gctcggcgat caaacgattt ttccaacgcg gatcggcgaa
     3121 atcttcgaac tgcttgggct cttcgtcttt ttttaccttc gaggtattcc aagccggcac
     3181 gatgtaaatc aagtcggtgg cgagccacgt ggtgcctttg agttcctccg gataggcagc
     3241 cgcttccggg
//
LOCUS       DATIRS010000042         2109 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1085193, whole genome shotgun sequence.
ACCESSION   DATIRS010000042 DATIRS010000000
VERSION     DATIRS010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2109
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1085193"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..499
                     /locus_tag="VLM90_00490"
     CDS             <1..499
                     /locus_tag="VLM90_00490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11457.1"
                     /translation="KGEDPSYWRDLGTIEAYYDASMDLCSIDPSFNLYNRAWPLRTVG
                     YADPPAKFVFDWADRRGMAVDSVVAEGTIISGSDVRNCIVGRNVRIHSYSHIENSVIM
                     DWVEIGRHCRIRNAIIDKANVIPTGTEIGYDLDKDRERYFVSPTGIVVLGRGPRKTTW
                     VMANS"
     gene            553..>2109
                     /locus_tag="VLM90_00495"
     CDS             553..>2109
                     /locus_tag="VLM90_00495"
                     /inference="COORDINATES: protein motif:HMM:NF015052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3536 domain-containing protein"
                     /protein_id="HSQ11458.1"
                     /translation="MERYICIHGHFYQPPRENPWLEAIELQDSAYPYHDWNERITAEC
                     YAPNSVARIVDGDNRIIKLINNYARISFNFGPTLLSWLEAKAPEVYGAILDADRDSQR
                     RFSGHGSALAQVYNHAIMPLANSRDRKTQIRWGIGDFTKRFQRAPEGMWLAETAVDVE
                     TLELLAEQDIQFVVLAPHQAARVRSIGARQCQQITGDAIDPSRAYRQLLPSGRAIGLF
                     FYDSPIARAVAFEGVLSHGDRFVDKLMGGFADGRDWPQLVHIATDGESYGHHHRYGDM
                     ALAYALDQIETKKLARLTNYGEFLEKHPPTHEVEIVEKTSWSCAHGIDRWWSDCSCNS
                     GAHPDWRQQWRTPLRNDLDSLRDTVTPLWQQQATDYFKNIWFARDTYIEVILDRSAAS
                     RERFLARHAARPLTGDEKIRALKLLELQRQLLLMYTSCGWFFDDISGIEPVQVLQFAG
                     RAVQLAQELFGDSLGERFIERLGAAHSNLPDQGDGKQIYEQRVRPARVDWERVGAHYA
                     VSSLFESIPEQ"
BASE COUNT          442 a          653 c          603 g          411 t
ORIGIN      
        1 caagggcgag gacccgagct actggcgcga cctgggcacc atcgaagcct actacgacgc
       61 tagcatggac ctctgctcca tcgatccgtc gttcaattta tacaaccgcg cttggccgct
      121 gcgcaccgtc ggttacgccg acccgccggc aaaattcgtt ttcgattggg ccgaccgtag
      181 aggcatggcg gtcgattcgg tggtcgccga gggcacgatc atcagcggca gcgatgtccg
      241 caactgcatt gttgggcgca acgtgcgcat tcatagctat agccatatcg aaaactcggt
      301 gatcatggat tgggtggaga tcggcaggca ctgccggatc cgcaacgcca tcatcgacaa
      361 ggccaacgta attcccaccg gcacagagat cggctacgac ctggataaag accgcgagcg
      421 ctactttgtc tcgcccaccg gtatcgtcgt gctcggccgc gggccgcgaa aaaccacctg
      481 ggtcatggcc aattcctaag cgcagtctgc agcaagttgc cgatagggca cgccgagaat
      541 attaatcgaa tcatggaacg ctacatttgc atacacggcc atttctacca gccaccgcgg
      601 gaaaacccct ggctcgaagc catcgagctg caagactcgg cgtaccccta ccatgactgg
      661 aacgagcgca tcaccgcgga gtgctacgcg ccgaactcag tggcgcgcat cgtcgatggc
      721 gacaatcgca tcatcaaact gatcaacaat tacgcgcgca tcagtttcaa cttcggcccg
      781 accttattgt cctggctcga ggccaaggcg ccggaagtgt atggcgcgat cctcgacgca
      841 gaccgcgata gccagcggcg cttctccggc catggctcgg cgctggcgca agtttacaat
      901 catgcgatca tgccgctcgc caatagccgg gaccgaaaga cgcaaatccg ctggggcatc
      961 ggcgatttca ccaagcgctt tcagcgcgcg ccggaaggca tgtggctggc ggagaccgcc
     1021 gtcgatgtcg aaactttgga gttgctggcc gaacaggata tccagtttgt cgttcttgcg
     1081 ccgcaccagg ccgctcgcgt gcgttccatc ggcgcgcgcc agtgtcaaca aatcactggg
     1141 gacgccatcg atccgagccg cgcctaccgg cagctgctgc cctccgggcg tgccatcggg
     1201 ttatttttct acgacagtcc gatcgcccga gcggtcgcct tcgaaggcgt gctatcccac
     1261 ggcgaccgtt tcgtcgacaa actcatgggc ggttttgccg atggccgcga ttggcctcag
     1321 ctggtccata tcgccaccga tggcgagagt tatggccatc atcatcgcta tggcgacatg
     1381 gcgctggcct acgccctgga ccagattgaa accaaaaagc tggcgcgttt gaccaactac
     1441 ggtgagtttc tcgaaaaaca tccgcccacc cacgaagtcg agatcgtcga aaaaacttcc
     1501 tggagttgcg cccacggcat cgaccgctgg tggagcgatt gcagctgcaa ctccggcgcg
     1561 catcctgatt ggcgtcaaca gtggcgcacg ccgctgcgca acgatctcga cagcctgcgc
     1621 gatacggtca caccgctgtg gcagcaacaa gccacggatt attttaaaaa tatttggttt
     1681 gcccgggata cgtatattga agtgatcctc gatcgctcgg cggcatcaag agaacgtttt
     1741 ctcgcccgcc acgctgcccg gccgttgact ggtgacgaga aaatccgcgc gctcaagttg
     1801 ctcgaactgc agcggcaatt gttgctcatg tacaccagtt gcggctggtt tttcgacgac
     1861 atctcgggca tcgaacccgt ccaagtcctc cagttcgccg gccgtgccgt ccagttagct
     1921 caagaacttt ttggcgactc gctgggagaa cgctttatcg agcggctcgg cgctgcgcac
     1981 agcaacctgc ctgaccaggg ggacggcaaa cagatctacg agcaaagggt ccggcccgcg
     2041 cgtgtcgact gggagcgggt tggcgctcat tatgccgtca gttcgctgtt cgaaagcata
     2101 ccagagcag
//
LOCUS       DATIRS010000043         1559 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1478527, whole genome shotgun sequence.
ACCESSION   DATIRS010000043 DATIRS010000000
VERSION     DATIRS010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1559
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1478527"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..684)
                     /locus_tag="VLM90_00500"
     CDS             complement(<1..684)
                     /locus_tag="VLM90_00500"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: protein motif:HMM:NF003792.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HSQ11459.1"
                     /translation="MAAIKTKYIFVTGGVVSSLGKGLAAASIGALLESRGLKVTILKM
                     DPYINVDPGTMSPYQHGEVFVTDDGAETDMDLGHYERYVSTAMGRKNNCTTGQIYETV
                     IGKERRGDYLGGTVQVIPHITDEIKRRIFAAAEGFDIAIGEVGGTVGDIEGLPFLEAV
                     RQVAWDLGRENVLYIHLTLVPYITGGGELKTKPTQHSVKELTGLGIQPDILLCRTDRI
                     LDKKIKNKIA"
     gene            complement(694..1467)
                     /gene="kdsB"
                     /locus_tag="VLM90_00505"
     CDS             complement(694..1467)
                     /gene="kdsB"
                     /locus_tag="VLM90_00505"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: protein motif:HMM:NF003950.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008690 - 3-deoxy-manno-octulosonate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HSQ11460.1"
                     /translation="MSVVAIIPARFGSTRLPAKPLAQICGRPMIQHVYESAAKAKVLD
                     RVIVATDDRRIEAVVKGFGGEVVMTSADHSSGTDRLAEVARKIKAELLVNVQGDLPFI
                     SAKTIGQAVQPLRRNRAIPMGTVCTAIYRESEWRDPNIVKVLTDKARLALFFTRAPIP
                     FRRNDGIDPNGKKIARRNQRRLWGYRHLGLYVYRRDFLLKFARLRPTALEQIESLEQL
                     RALENGYRIYVAQVDERSVEVDTPADLLRAESYLKRRSN"
BASE COUNT          341 a          474 c          400 g          344 t
ORIGIN      
        1 ggcgatctta tttttgattt tcttgtcaag tatacgatcg gtgcggcaga gcagaatatc
       61 gggctgaatc cccaaaccgg tcagctcttt gacgctatgc tgggtcggct tggtcttgag
      121 ctcgccgcct ccggtaatat agggaaccag agtcaggtga atatagagaa cattctcccg
      181 gcccaagtcc caggccactt ggcgcaccgc ttccaagaac ggtagacctt cgatatcgcc
      241 caccgtgccg ccaacttcgc cgatggcgat atcgaagcct tcagcggcgg cgaagatgcg
      301 ccgtttgatc tcgtcggtga tatgcggaat cacctggacg gtgccgccga gataatcgcc
      361 gcgccgttct ttgccaataa ccgtctcgta aatctgcccg gtcgtgcagt tgtttttccg
      421 ccccatagcg gtggacacat aacgttcata gtgaccgagg tccatatcgg tctcagcacc
      481 gtcgtcggtg acgaagacct cgccatgttg atacgggctc atggtgcccg gatcgacgtt
      541 gatgtacggg tccatcttca agatcgtcac tttgagaccg cggctttcca aaagcgcgcc
      601 gatggaagcc gccgccaacc ctttgcccaa agacgacacc acaccgcccg tgacgaaaat
      661 atatttagtt tttatcgccg ccatcgccac ctctcagttc gaacgtcgct ttaaataact
      721 ttccgcccgc aggagatcgg ctggtgtatc cacctccacc gaccgctcgt cgacctgcgc
      781 gacgtaaatt cgatagccgt tttccaaggc tcgtaactgt tccaaacttt caatttgctc
      841 caacgcggtc ggccgcagcc gggcgaattt caataggaaa tcccgccgat aaacatataa
      901 gccgagatga cgatagcccc aaagtcggcg ctggttccgc cgggcaatct ttttgccgtt
      961 gggatcaatg ccgtcgttgc gccggaaagg tatcggcgcc cgggtaaaaa acaacgccaa
     1021 cctggccttg tccgtgagca ccttcacgat attcggatcg cgccattcgg actcacggta
     1081 aatcgccgtg cataccgtgc ccatcgggat agcgcgattg cgccgcaacg gctgcaccgc
     1141 ctggccaatc gttttagcgc taataaacgg caaatcgccc tggacgttca ccagcagttc
     1201 ggccttgatc ttgcgcgcca cctcggccaa acggtcggtg ccgctgctat gatcggctga
     1261 ggtcatcaca acttcgccac cgaatccttt caccaccgct tcaatgcgcc gatcgtcggt
     1321 ggcgactatc acccggtcca gcactttagc tttggcagcg ctctcgtaga catgttgaat
     1381 catcggccgg ccgcagattt gagctaaggg cttagccggc agccgggtcg atccaaagcg
     1441 cgccgggata atcgccacaa cgctcatgga ctcacgaatt cacggatgca atgacaatcg
     1501 attgaatggt taatactggc atggcgtcgc caaaaacaaa aaaccgcaat ggctttccc
//
LOCUS       DATIRS010000044         1754 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_298968, whole genome shotgun sequence.
ACCESSION   DATIRS010000044 DATIRS010000000
VERSION     DATIRS010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1754)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1754)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1754
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_298968"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..587)
                     /locus_tag="VLM90_00510"
     CDS             complement(<1..587)
                     /locus_tag="VLM90_00510"
                     /inference="COORDINATES: protein motif:HMM:NF015715.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HSQ11461.1"
                     /translation="MDVAAFLVNAIRGGLGNLAAYLAAHVLLCLLPAFYIAGAMTALI
                     PKESVTRFLGRDTRRVVSYPAAALAGGLLAVCSCTIVPLFAGIHKKGAGIGPAITFLF
                     FAPAANILALVYTGSVIGVDLAVARLFLSLAFGVGIGMIMALLFRADDAAHDAATSQM
                     FAPQNVKGMSRTALIFLLTWVALLLVGTLKLDILTG"
     gene            complement(704..1189)
                     /locus_tag="VLM90_00515"
     CDS             complement(704..1189)
                     /locus_tag="VLM90_00515"
                     /inference="COORDINATES: protein motif:HMM:NF015941.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine-specific kinase"
                     /protein_id="HSQ11462.1"
                     /translation="MELKTVAIEKPDDINFILGQSHFIKTVEDIHEALVQAIPGIKFG
                     VGFCEASGAMLVRWSGTDPAMIDLAKRNALALSAGHSFILFLGAGYFPVSILNVVKMV
                     PEVCRIFCATANPVEVVIAETAQGRGILGVIDGGKSQGLEDEAGIAWRKELLRKIGYK
                     L"
     gene            complement(1345..>1754)
                     /locus_tag="VLM90_00520"
     CDS             complement(1345..>1754)
                     /locus_tag="VLM90_00520"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSQ11463.1"
                     /translation="LAEKVLPHVMVLASKLKLDMQLVRTYSLPPDAYVVADGVIAQGP
                     AQYRKNLHEESEKYLDGKVASLQADGFTAVSATVIEGDAASELIDLAAEPPQSLIAMS
                     THGRSGLGRWVLGSVAEKVVQHSLAPVLLIRAL"
BASE COUNT          393 a          516 c          504 g          341 t
ORIGIN      
        1 ccggtgagga tatcgagctt caacgtgccg actagcagca gcgccaccca ggtgagcaga
       61 aaaatcagcg cggtgcggct catgccctta acgttttgcg gagcgaacat ctgactggtc
      121 gccgcatcgt gagccgcgtc atccgcgcga aacagcaggg ccatgatcat gccaatgccg
      181 acaccgaagg cgagcgagag aaacaatcgg gccacggcca ggtcgacgcc gatgacgctg
      241 ccggtgtaaa ccaacgccaa aatgttggcc gcaggggcga aaaaaagaaa cgtgatcgcc
      301 gggccgatgc cggcgccctt tttgtgaatg ccggcgaaaa gcggcacgat cgtgcaagaa
      361 cacaccgcca gcagcccccc cgccaaggcg gctgccggat acgaaaccac tcgccgcgtg
      421 tcgcggccga gaaatcgcgt cacgctttcc ttcgggatca gcgcggtcat cgccccggcg
      481 atataaaatg ccggcaacaa acacaagagg acatgtgccg caaggtaggc ggccagatta
      541 ccgagaccgc cacgaattgc attgaccaaa aacgccgcaa catccatcac ccgctccgtt
      601 ctcgtcgccg ggcaactgga atcatttgat ggatctgttc caagatcatg atgaaggatc
      661 gttggtaaat gtaaccgtga aaatttttgg ccatccgggt gaactacagt ttgtaaccga
      721 ttttgcgcag gagctctttg cgccaggcga tgccggcttc atcctccaag ccttggcttt
      781 tgccgccgtc gatgacgccg aggatgccgc gcccttgcgc tgtttcagca ataaccactt
      841 cgaccgggtt cgccgtggcg cagaaaatgc ggcagacttc cggcaccatc ttcacaacgt
      901 tgaggatgct tacagggaaa tatccggcgc cgagaaatag aataaaactg tgaccggcgg
      961 agagcgccag ggcgttgcgc ttggccagat cgatcatcgc cggatccgtg ccgctccagc
     1021 gcaccagcat ggcgccggag gcttcgcaga agccgacacc gaacttgatt cccgggatcg
     1081 cttgaaccaa agcctcgtga atgtcctcga cagtcttgat gaagtggctc tggccaagga
     1141 tgaagttgat gtcgtcgggc ttttcaatgg cgacggtttt gagctccatt tactctttcc
     1201 tgtggctgtg cggcgtgggg ttcatgggcg tgaagcaaga gaggacataa gatctatgaa
     1261 agatttctcc ctgcggtcga aatgacagcg tatttaacat tggcgtcttt gcgccttgcg
     1321 ggagaaagat tcaaatccgg aaaactagag cgcgcggatc agcagcaccg gggcgaggga
     1381 gtgctggacg actttctccg cgacactgcc gagcacccag cggccgagtc ccgacctgcc
     1441 gtgggtcgac atggcgatta gactttgtgg cggctccgcc gccagatcga tcagctcgct
     1501 cgccgcgtcg ccctcgatca cagttgcaga cacggcggta aaaccgtcgg cttgcagact
     1561 ggccactttt ccgtccaaat atttctcgct ctcctcatgc agattcttgc gatactgcgc
     1621 cggcccctgg gcgatcacgc catccgcgac cacataggcg tcgggcggca ggctataggt
     1681 tcgcaccaac tgcatgtcga gttttagttt acttgccagc accatgacat ggggcagcac
     1741 cttttcagcc aatc
//
LOCUS       DATIRS010000045         2482 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1675601, whole genome shotgun sequence.
ACCESSION   DATIRS010000045 DATIRS010000000
VERSION     DATIRS010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2482)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2482)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2482
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1675601"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            508..741
                     /locus_tag="VLM90_00525"
     CDS             508..741
                     /locus_tag="VLM90_00525"
                     /inference="COORDINATES: protein motif:HMM:NF015927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF350 domain-containing protein"
                     /protein_id="HSQ11464.1"
                     /translation="MELIVEYLKTFGWGVTGAITMAVSLWILLKVFTWLTPIDEWEEL
                     KKGNLGIAIILAAVIIGFGLVVASMVAPPGVVK"
     gene            complement(973..2112)
                     /locus_tag="VLM90_00530"
     CDS             complement(973..2112)
                     /locus_tag="VLM90_00530"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: protein motif:HMM:NF004677.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HSQ11465.1"
                     /translation="MKPILPGAAIGVLGSGQLGRMFAIAARQMGYRVHTFSSETDTPT
                     GQVADVEIAASYDDLDAVRRFAQAVQVVTFEFENVPAACVEAAAAFVPVRPGGSLLHI
                     AQNRLREKSFLARNGFPTTEFAAVRGLDDLPAATEKIGFPAIMKTASSGYDGKGQAKV
                     VNLDDAVQAFHGCGGQEMIVEGFVDFELEFSVVMARGLDGQFVHWGAIQNRHKHHILD
                     VSFAPARMGQAASARAIEVSRALADKLDLIGVLCIEFFLTRNGEILFNELAPRPHNSG
                     HLTINASRTSQFEQQLRAVCGLPLGSTEFVGAAAMANLLGDLWHGGEPNWPAACALPD
                     VKLHLYGKIEPRPGRKMGHLTALAATADSAAQIVLLARENLQPVR"
     gene            complement(2121..>2482)
                     /locus_tag="VLM90_00535"
     CDS             complement(2121..>2482)
                     /locus_tag="VLM90_00535"
                     /inference="COORDINATES: protein motif:HMM:NF012934.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AIR carboxylase family protein"
                     /protein_id="HSQ11466.1"
                     /translation="TPAWLSEFAGGAEGRGIEVIIAGAGGAAHLPGMTAAQTLLPVLG
                     VPVESAALKGMDSLLSIVQMPGGIPVGTMAIGKAGALNAALLAIAILANSRPELREKL
                     RQFRANQTAAVRQQKLP"
BASE COUNT          539 a          738 c          718 g          487 t
ORIGIN      
        1 gctctgcgag cacggcgctt gccgtcgctg aggtcgcgag ccgagcctgg ccgcctgaca
       61 ccaaggcgca cttggttgcg gtcctagatc gagccatgtc aacggccgtg gattggaccg
      121 aaaatggctt caaagatgag cgggcgtggc tcgaagatat tctggcgacc tcgaccgcta
      181 agctacaagc gtccggtatc agcgtctctg caatcgtcaa gggaggtgat cccaaagaag
      241 ttctcgtaga agaagccgag aggctcagag ttgattgcat ctttctggga gccagagggc
      301 tcagacgcct tgagcgtttt ttgctcggca gtgtctccac cgcagtcgcc acgcgcgccc
      361 aatgttctgt tgaaatccta cggccccggt aaacaaccgc gcaataaaat ttgcccgcaa
      421 agcatggcgc tggccatcgg cgccaagaaa acgaatcaat tgcagcccag gtgacgatag
      481 gatagggcta ttcaacagag gaaaaccatg gaactaatag ttgaatatct aaagactttt
      541 ggctggggag taacgggcgc cattacgatg gccgtgtccc tgtggatatt gctcaaggtt
      601 tttacctggc tcacaccgat agatgagtgg gaggagttga aaaaaggcaa tcttgggatt
      661 gccatcatcc tagccgctgt gattatcggt tttggtctgg tagttgcgtc gatggtagct
      721 cctcccggag ttgttaaatg aggttgtaaa ttacagtgaa ttcccgctag aaaaaagaag
      781 gtatctaagt tcagcctttt cattttgggt tggatccatc ttaccgcgcc ctctcccaca
      841 acgtcccagc aaatcgctcg aactcgatcc gctggacagg tgccagtccc tgcgccgctc
      901 gcgtgatagg gttgactaca tcgaagcgcc accgattcca acaagaacat tgggcgcaac
      961 ggtatagctc gactaacgaa ccggttgcaa attttcccgg gccaagagaa cgatctgcgc
     1021 cgcgctatca gccgtcgctg ccagagccgt cagatggccc atcttgcgcc caggacgagg
     1081 ctcgatcttg ccgtagagat gaagcttcac gtccggcagc gcacaggccg ccggccaatt
     1141 gggctcgccg ccgtgccaca agtctcccag taaattggcc atggccgcag cgccgacaaa
     1201 ttccgtcgag ccgagcggca ggccgcagac cgcgcgcagt tgttgttcaa attgactggt
     1261 gcgcgacgcg ttgatcgtca aatggccgga gttatgtggc cgaggcgcga gctcgttgaa
     1321 cagaatctcg ccatttcgcg tcaggaaaaa ctcgatacac agcacgccga tcaggtcgag
     1381 cttatccgca agcgctcggg aaacttcaat ggcgcgagcg ctggctgcct ggcccatccg
     1441 cgccggcgca aatgatacgt cgaggatgtg atgtttgtgg cgattttgaa tcgctcccca
     1501 gtggacaaac tgaccgtcca ggccgcgcgc catcaccacc gagaattcca gttcgaaatc
     1561 gacaaaccct tcgacaatca tctcctggcc gccgcaaccg tgaaatgcct gcacggcgtc
     1621 atcgagattc acaaccttcg cctgcccttt gccatcgtaa cccgagctgg cggttttcat
     1681 gatcgccggg aagccgattt tctctgtcgc cgcggggaga tcgtcaagcc cacgcacggc
     1741 agcaaactct gtcgtcggga aaccgttccg cgcgagaaag ctcttttcgc gcaggcgatt
     1801 ctgagcgatg tgcaacagcg aaccgccggg acgcaccggc acgaaagcgg ccgccgcctc
     1861 gacgcaggcc gccgggacat tttcgaattc gaaagtcacc acttgaaccg cctgggcaaa
     1921 ccggcgcacg gcgtcaagat cgtcatagga cgcggcgatc tcgacatcgg ctacctgccc
     1981 tgtcggtgtg tcggtttcag atgaaaaggt gtggacgcgg tagcccatct ggcgcgccgc
     2041 aatggcgaac atgcggccca attggccgct gccaagaaca ccgatggctg cccctggaag
     2101 aatgggtttc actctgctgc tcacggcaac ttctgctggc gcacggcggc ggtctgattg
     2161 gcgcggaact ggcgcagttt ctcgcgcagc tccggacgtg aattggcgag gatcgcgatg
     2221 gcgagcaaag ccgcgttgag cgccccggct ttgccgatgg ccattgtgcc tacaggaatg
     2281 ccaccgggca tctggacaat cgacaataat gagtccatgc ctttgagcgc ggcactctca
     2341 accggcacgc cgagcacagg aagcagagtc tgcgccgccg tcatgcccgg cagatgcgca
     2401 gcgccgccgg cgccggcaat gatcacttcg atgccgcgcc cttccgcgcc accagcgaac
     2461 tcactcagcc aagccggcgt cc
//
LOCUS       DATIRS010000046         1716 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1478851, whole genome shotgun sequence.
ACCESSION   DATIRS010000046 DATIRS010000000
VERSION     DATIRS010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1716)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1716)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1716
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1478851"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..489)
                     /locus_tag="VLM90_00540"
     CDS             complement(<1..489)
                     /locus_tag="VLM90_00540"
                     /inference="COORDINATES: protein motif:HMM:NF014215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSQ11467.1"
                     /translation="MSESKTVDIRLDVPYGGGAARNLCVDLYLPTGAGAHPALLCLHG
                     GAWLRGSQRQYKSWGPWLAERGYAVVAVDYRLSSQASPAWPGVWQDVCRALEWLIDQA
                     PALNLDPLRLGAIGDSAGGHMAAMLSLHEATAKHIRAMVGVYGIYDLPDWWRVTQPPK
                     RTD"
     gene            653..>1716
                     /locus_tag="VLM90_00545"
     CDS             653..>1716
                     /locus_tag="VLM90_00545"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ11468.1"
                     /translation="MSANGSKSSQVRTQLDHPIIDTDGHTVELTPVFFDYIKAIGGAG
                     MIERYKTAVGSRANNRWMELTDDERRYSRATCPPWWARPAKNTLDRATASLPRLLHRR
                     MDELGMDFTVLYPTFGLTEPPRIEEEEVRRIACRALNAFHSDIYRDYADRMTPVAVIP
                     VHSPQEAMEELEFAVKQQGFKAAVISHVQRPVPKMLQEHRDLAANMTYIDLLALDSEY
                     DYDPFWAKCVELKIAVTTHATGQGWGSRRSVSNYMFNHIGHFGAAGEAMCKALFFGGV
                     TRRFPTLNFAFLEGGVHWACGVYSDIVGHWKKRNAKAIHDLDPANLDRALMRQLIGEH
                     GNEKMTAKVDAIMDWLSQPQR"
BASE COUNT          356 a          564 c          480 g          316 t
ORIGIN      
        1 gtcggtgcgc ttgggtggct gggtgacgcg ccaccaatcc ggcaaatcgt aaatgccgta
       61 aaccccgacc atggcgcgaa tatgtttcgc cgtggcttca tgcagcgaca gcatcgccgc
      121 catgtggccg ccggcagagt cgccgatggc accgagccgc aatggatcga gattgagcgc
      181 tggggcttgg tcgatcaacc actccaacgc gcggcagaca tcttgccaca cgcccggcca
      241 cgccggactc gcttggctcg acagacgata atcgaccgcc actacggcgt agccgcgctc
      301 cgccagccat ggcccccagc tcttgtattg ccgctgcgac ccgcgcaacc acgcgccacc
      361 gtgcagacag agcagtgccg gatgcgctcc tgcgccagtc ggcaaataga gatcgacaca
      421 aagatttctc gccgccccgc cgccatacgg cacatcgagg cgaatatcca cggttttgct
      481 ctcgctcatg tcaacaccct ttcgcatcat cgactcgctt agcgtccttt gcgcctttgc
      541 gcgagataat ccctctactg cttccgatac acgtagcacc gcaacctggc ccgagcaatc
      601 gaattgacag tcaggaagcc cgcgtaatat accgggcata gaggtattcg atatgtcagc
      661 gaacggttcc aaatcatccc aggtccgcac gcagctcgat cacccgatca tcgacaccga
      721 cggccacacc gtcgagctga cgccagtgtt tttcgattac attaaagcga tcggcggcgc
      781 cggcatgatc gaacgctaca agacagccgt cggcagccgg gccaacaacc gctggatgga
      841 actgaccgat gacgagcgcc gctattcgcg tgcgacttgt ccgccctggt gggcgcgccc
      901 ggcgaaaaac accctcgacc gcgcgaccgc ctcgctgccg cgcttgctgc accggcgcat
      961 ggatgagctc ggcatggatt tcaccgtgct ctacccgacc ttcggtctaa ccgaaccgcc
     1021 gcgcattgag gaagaagaag tgcgccggat cgcttgccgc gctttgaatg cctttcactc
     1081 agacatctat cgcgactatg ccgaccgcat gacgccggtg gcggtgatcc cggtccactc
     1141 gccgcaagaa gccatggagg aattggaatt tgccgtgaag caacagggct tcaaggccgc
     1201 ggtgatttct catgtgcaac ggccggtgcc gaaaatgttg caggaacatc gcgacttggc
     1261 cgccaacatg acgtatatcg atctgctcgc cctcgacagc gagtatgact atgacccgtt
     1321 ctgggccaaa tgcgtcgagc tcaaaatcgc cgttaccact catgccaccg gccagggctg
     1381 gggcagccgc cgctcggtgt ccaattatat gttcaaccac atcggccact tcggcgccgc
     1441 cggcgaagcg atgtgcaagg cgctgttttt cggcggcgtg acgcgccgtt ttccgacgtt
     1501 gaacttcgct tttctcgaag gcggcgtgca ctgggcctgc ggcgtttact cggacatcgt
     1561 cggccactgg aagaaacgca acgccaaggc gattcacgat ctcgatcccg ccaacctgga
     1621 tcgcgcactg atgcgccaac tgatcggcga acatggcaat gagaaaatga ccgccaaggt
     1681 tgacgccatc atggactggc taagccagcc ccagcg
//
LOCUS       DATIRS010000047         1860 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1380643, whole genome shotgun sequence.
ACCESSION   DATIRS010000047 DATIRS010000000
VERSION     DATIRS010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1860)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1860)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1860
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1380643"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..613)
                     /locus_tag="VLM90_00550"
     CDS             complement(<1..613)
                     /locus_tag="VLM90_00550"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HSQ11469.1"
                     /translation="MSIEQLKQDLVTASHILHHQGIAAAFGHVSARIPGTDTFIFPPR
                     MSPALVRSDNLLVLDVEGHQLSGDGRPNTEFWIHARIFKARPDVQSVCHVHPPSCVVL
                     GSLGETIRPLHASGAIFRNNVQVFDPVTLIRTRELGDQVAKTLGSHGAMLLRGHGVNV
                     ADKDVRRVCVMTLWMEEAANYQLRAMSAGKPRYFTPEELDLMYS"
     gene            905..>1860
                     /locus_tag="VLM90_00555"
     CDS             905..>1860
                     /locus_tag="VLM90_00555"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HSQ11470.1"
                     /translation="MATIDPNDPGVIQRVYCQSVEVARLLREYASCWQISAFLPEALP
                     DHEIASAVVIGHSPTVFSDTLRRAIEQNAVRLIYVTGAGMDLPPAVRQIPIFAFVQTP
                     VQAAPLSGLINAAFENLALTRRQAVLERELDRSRNDISLLNEIGIALSTQRDRASLLN
                     LILQKSREITRSDAGSLYLAEEHAGGEKRLRFEITQNDSVEFPFNDFVLPIDDASVAG
                     YVALTGQEVHLDDVYRIPASLPFRFNRKLDEESGYRSKSILAVPMKRPQGEIIGVLQL
                     INCKRDARLRVSASTADDAVVPYPDECRTLLGSLASQAAVAI"
BASE COUNT          370 a          517 c          571 g          402 t
ORIGIN      
        1 ggctgtacat tagatccagt tcttccggtg taaagtagcg tggcttgccg gcggacatgg
       61 cgcgcaattg ataatttgcc gcttcttcca tccagagcgt catcacgcag acgcgccgca
      121 cgtctttatc ggcgacattg acgccgtggc cgcgcagtaa catggcgcca tgcgagccaa
      181 gcgtttttgc gacctgatcg ccgagctcgc gcgtgcggat caaggtcacg gggtcgaaaa
      241 cctggacgtt gtttctaaaa atcgccccgg aagcgtgcag cggccgaata gtttcgccga
      301 gggagccgag cacgacacag ctcggcgggt ggacgtgaca gaccgactgg acatcggggc
      361 gggctttgaa gatgcgcgcg tgaatccaga actccgtgtt gggccggccg tcgccggaca
      421 actgatgacc ttcgacatcg agcacgagca aattgtcgct acgaaccagc gccggactca
      481 tgcgcggcgg aaaaataaag gtgtcggttc ccggtatgcg cgcgcttaca tggccgaacg
      541 cggcggctat gccttgatgg tgcagtatgt ggctggcggt gacgagatct tgcttgagtt
      601 gttcgatgct catgggattt ttctctctgc cggattagtc ttaagaccca tacgccacat
      661 ggcgaaaaat gtctacggac tggtacatgg ggtgatttcc tttgatcgcg cgtcgcggtc
      721 gcgtgtttta ctgcgtggct tgacatagcg gcgggtttga cgcccttgca tgcgtcatag
      781 cgcaaaggag gctatgttgg cgttgagggc ggatttccga taggttttaa tcgggctcgg
      841 tgaaggatct taacggaagc ggcggggcaa aagctccatc ggctagatcg gcgtaacgga
      901 atcgatggcg actattgatc caaacgaccc aggcgtgatt cagcgcgtgt attgtcagag
      961 cgttgaagtc gcgcggctct tacgcgaata cgcttcgtgt tggcagatat ctgctttttt
     1021 acccgaagca ctgccggatc acgagatcgc ttctgcggtc gtgatcggcc actcgccaac
     1081 agtattttcg gatactctac gccgagccat tgaacaaaac gcggtacggc tgatttatgt
     1141 aaccggcgcc gggatggatc taccgccggc ggtcaggcag attccgatct ttgcgtttgt
     1201 ccagactccc gtgcaggcgg cgccgctaag cggtttaatc aatgcggcgt tcgaaaacct
     1261 cgcgctcacg cggcgccaag ctgttctgga gcgagagctt gatcgctcgc gcaacgacat
     1321 tagcctgctc aatgagatcg gcatcgcgct ctccacccag cgggaccgcg cgtccttgct
     1381 taacttgatc ctgcaaaaga gccgggagat cacccgcagc gacgcgggct cgctctacct
     1441 cgccgaagaa cacgccggcg gcgagaagcg cctccgtttc gagatcacgc aaaacgacag
     1501 tgtggagttt cccttcaatg atttcgtctt gcccatcgac gacgcgagcg tggcgggata
     1561 tgtggctttg accggccagg aggttcatct cgatgacgtt tatcggattc cggcgtcgct
     1621 gccttttcga ttcaatcgca aattagacga ggagagcggc tatcgcagca agtcgatcct
     1681 cgctgtgccg atgaagcggc cacagggtga aatcatcggc gtgttgcaac tgatcaattg
     1741 caagcgggac gcgcggttgc gcgtctccgc atccaccgcg gatgacgcag tcgtgccgta
     1801 cccggacgaa tgccgcacgc tcctcggctc gttggccagc caggcggccg tggccatcga
//
LOCUS       DATIRS010000048         1723 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_200744, whole genome shotgun sequence.
ACCESSION   DATIRS010000048 DATIRS010000000
VERSION     DATIRS010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1723
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200744"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..410)
                     /locus_tag="VLM90_00560"
     CDS             complement(<1..410)
                     /locus_tag="VLM90_00560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11471.1"
                     /translation="MANTNNGWRPPEFIAREQCIKDTEEVLGMPDIPIKSTEDIFRIN
                     TLGMDWDLGMVVHEPVDSSKIPTGADGKKAGFFLLHGGSRDFKGIERHAKMLASKFGF
                     RVIAGTFPGRFYFSDPSRDWPDDTIHADGTVRTP"
     gene            596..1690
                     /locus_tag="VLM90_00565"
     CDS             596..1690
                     /locus_tag="VLM90_00565"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ11472.1"
                     /translation="MKVLITGGLGVNGAVTARLMVKDGLRPVLMDNRMDLTLMGDIKD
                     QVDIVIGDICDQAALEKAVDDYAVTHIAHLAALMPEPAEANPRLGVKVSTEGTINVLE
                     VARAKNIKRVVFTSSKAAYGEITGEYAPPTCKPVREDYPKRPADLYGSLKVCCEELGR
                     YYRETYGIEFIALRFVSIYGPGKEARHGPLSFYGQLIERARSGEKWSIPQGGDQLNDA
                     VYVGDVGRAVYLAIKAPTPSEWTFNIGTGSASTPRDFLNAAAKLFPNHKIELGPGPSK
                     LGRSKQSYCVFDISAAEKNLDYEPAYDVERGVRDYVATLDMLGRYRRALTTKATKAMK
                     FSKNYYAELCALRVLRGEKSVSITTVNSGF"
BASE COUNT          393 a          450 c          527 g          353 t
ORIGIN      
        1 atcggtgtgc gcacggtgcc gtcggcgtgg atcgtatcgt cgggccagtc gcggctggga
       61 tcggaaaaat aaaatctgcc gggaaaggtg ccggcgatga cgcgaaagcc gaacttgctc
      121 gcgagcatct tggcgtggcg ctcgatgcct ttgaagtctc tcgatccgcc gtgcaggaga
      181 aagaagccgg ctttcttgcc gtcggcgccg gttgggatct tgctcgaatc caccggctcg
      241 tggacgacca tgcccaggtc ccaatccatg ccgagggtgt tgatgcggaa aatgtcctcg
      301 gtgctcttga tcgggatgtc cggcatgccc aagacttctt ccgtgtcctt gatgcattgc
      361 tcccgagcga tgaactcagg cggacgccag ccattgtttg tgttcgccat cttgactctc
      421 cttactttac gcttcgtttt actagggcac gcgaaggcgt gtcaacaccg ggtgagagtt
      481 ttcgagtcca actagagacg cgaaactgca aaccagaaac tctatcgtcg cgcactagac
      541 aaaggtgtcg gaaaccggct agaaggagtt ttgcattcga gagaaggagc cgacgatgaa
      601 agtgctgatt accggcgggc taggagtcaa cggcgcggtg accgcgcggt tgatggtcaa
      661 ggacggactg cggccggtgc tgatggataa tcgaatggat ctgactttga tgggcgacat
      721 caaagaccag gtcgacatcg tcatcggcga tatctgcgat caggcggcct tggagaaagc
      781 cgtcgacgat tatgcagtga cgcatatcgc gcacctggcg gcgttgatgc cggagccggc
      841 tgaggccaat cctcggctcg gcgtgaaggt tagcaccgaa ggcactataa acgtgttgga
      901 agtggcgcgc gcaaaaaata tcaaacgcgt tgtctttacc agctcgaaag cggcctacgg
      961 cgagatcacc ggcgagtatg cgccgccgac ctgcaaaccc gtgcgtgaag attatccaaa
     1021 acggccggcg gatctctatg gttcgctgaa agtttgctgt gaagagctgg gccgctatta
     1081 tcgcgagacc tacggcatcg agttcatcgc cctgcgattc gtatcgatct acggcccggg
     1141 aaaagaagcg cgccacggcc cgctgtcttt ctacggccag cttatcgaaa gggcgcggag
     1201 cggcgagaaa tggtcgatac cgcagggcgg cgatcagctc aatgatgcgg tctatgtcgg
     1261 cgacgtgggc cgcgcggtct atctcgcaat caaagcgccg acgccgagcg agtggacttt
     1321 taacatcggc accggcagcg cttcgacgcc gcgagatttc ttgaacgcgg cggccaaact
     1381 atttcccaat cataaaatcg agcttggccc agggccgagc aagctgggcc ggagcaaaca
     1441 gagctactgc gtgttcgata tttccgcggc ggaaaaaaat ctcgactacg agccggccta
     1501 cgacgtcgag cgcggcgtgc gcgattacgt cgcgacgctg gatatgttgg gaaggtatag
     1561 aagagcactc accacgaagg ccacgaaggc catgaagttt tcgaaaaatt attatgctga
     1621 actttgtgct cttcgtgtcc ttcgtggtga aaaatcagtt tcgataacaa cggtaaattc
     1681 gggattctaa taacggagga acaatggcag aagcacctaa agg
//
LOCUS       DATIRS010000049         1847 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_594134, whole genome shotgun sequence.
ACCESSION   DATIRS010000049 DATIRS010000000
VERSION     DATIRS010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1847)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1847)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1847
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_594134"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1847
                     /locus_tag="VLM90_00570"
     CDS             <1..>1847
                     /locus_tag="VLM90_00570"
                     /inference="COORDINATES: protein motif:HMM:NF012361.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HSQ11473.1"
                     /translation="AIGLEPKDYDIVPGGWSGAELEGIVCRHPWLDRESKIVLGDYVT
                     QDQGTGCVHIAPGHGQEDYEVGVRYGLPVMAPVDPTGKFTAEAGDLQGESVFRADPRI
                     VQKLVENRALLKEDRLTHSYPHCWRCKKPVIFRATEQWFISMEKNDLRGQALRAIDEV
                     KWIPPWGRDRIRGMLEARPDWCISRQRSWGVPIPAVYCKKCNRALLTQAICNHVAAIF
                     EKAGSDAWFTQPVNQLMPANLKCPECGGQDFSREEDILDVWFDSGVSYASVVEQDPRL
                     GGRADLYLEGSDQHRGWFHTALLTSLATRDRAPYASVLTHGFTLDGKGRKMSKSMGNT
                     IAPQDIAKKFGAEILRLWVSAEDYREDVRISDEILNRLVEAYRRVRNTARFLISNLYD
                     FDPAKDRVPAADLDDLDRWILGRTESLLSRCRDAYEKCEFHVVYHSVNNFCAVDLSAQ
                     YLDIVKDRLYCEGTNSTKRRAAQTALYRILDVLVHLTAPILSFTAEEIWNYLPDKAER
                     PKSVFLSLMPEADTKVVDAEFGEKWERIFRERGEVLKALEQARSAGIIGHSLDAKVVF
                     AKHGNHQGAKLSEWVNTDRARLQDLLIVSQADNGGETAAATNDSAASYD"
BASE COUNT          399 a          548 c          542 g          358 t
ORIGIN      
        1 agccatcggc ctggaaccca aggattatga catcgttccc ggtggctgga gcggcgccga
       61 acttgaaggc atcgtctgcc gtcatccctg gctcgaccgc gagtcgaaga tcgtgctggg
      121 cgactacgtg acccaagatc aaggcaccgg ctgcgtccac atcgcccccg gccatggtca
      181 ggaagattat gaagtcggcg tgcgctatgg cttgccggtc atggcgccgg tggacccgac
      241 agggaaattc accgcggaag cgggggattt gcaaggcgaa tcggttttca gagccgaccc
      301 gcgcatcgtc caaaagttag tcgaaaaccg cgccctgctt aaagaagaca ggctgaccca
      361 tagctatccg cactgttggc gctgcaaaaa gccggtaatc tttcgcgcca ccgaacagtg
      421 gtttatctcc atggagaaaa acgacctgcg cggccaggcg ctccgcgcca tcgacgaagt
      481 caaatggatt ccgccctggg gcagggatcg gattcgcggc atgctcgaag cgcgcccgga
      541 ctggtgcatc tcgcgccagc gttcgtgggg cgtgccgatc ccggctgtct actgcaagaa
      601 atgtaaccga gccttactga cccaggcgat ctgcaatcat gtcgcggcga tttttgagaa
      661 agccggatcg gatgcttggt tcacccagcc ggtgaaccag ctgatgccgg ccaatctcaa
      721 gtgtcccgag tgtggcggcc aagatttttc acgggaagaa gacattctcg atgtctggtt
      781 cgattcgggc gtcagttacg cttcagtagt cgaacaagac ccgcgtctcg gcggtcgcgc
      841 cgatctttat ctcgaaggca gcgatcaaca tcgcggctgg tttcacaccg cgctattgac
      901 ttcgctggcg acccgcgacc gcgcgcctta cgccagcgtg ctcactcatg gcttcacctt
      961 ggacggcaag ggcagaaaaa tgtccaagtc catgggcaat accatcgccc cgcaagacat
     1021 tgcgaaaaaa ttcggcgccg agattctgcg cttgtgggtc tccgccgagg actatcgcga
     1081 agatgtgcgc atctcggatg agattttgaa tcgcctggtc gaggcctatc ggcgcgtgcg
     1141 caataccgcg cgctttttaa tcagcaatct ctatgatttc gatccagcga aggatcgcgt
     1201 gccagcggcc gatctcgacg acctcgaccg ttggatcctc gggcgcacgg aaagcctgct
     1261 cagccgctgc cgcgacgctt atgagaagtg tgagttccac gtcgtctatc acagcgtcaa
     1321 taacttctgc gctgtcgatc tcagcgcgca gtatctggac atcgtcaaag accggcttta
     1381 ctgcgaaggg accaattcga ccaagcgccg cgcggcgcag acggcgttgt atagaatact
     1441 tgacgtgcta gtgcatttga ccgcgccgat cctgtcgttt accgccgaag aaatctggaa
     1501 ctacctgccg gacaaagccg agcggccgaa gagcgtcttt ctatcgctaa tgccggaagc
     1561 cgacaccaag gttgtcgatg ccgaatttgg tgagaaatgg gagcgcatct tccgcgagcg
     1621 cggcgaagtg ctcaaggcgc tggaacaggc gcgcagcgcc ggcatcatcg gccactccct
     1681 cgacgccaag gtggttttcg ccaaacacgg caaccatcag ggcgcaaaat tgagcgaatg
     1741 ggtgaacacc gaccgcgccc ggttgcagga tctgttgatc gtatctcaag ccgataacgg
     1801 cggtgaaacc gccgccgcca ccaacgattc agcggcaagc tacgacg
//
LOCUS       DATIRS010000050         2340 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_4209, whole genome shotgun sequence.
ACCESSION   DATIRS010000050 DATIRS010000000
VERSION     DATIRS010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2340)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2340)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2340
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4209"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..824
                     /locus_tag="VLM90_00575"
     CDS             <1..824
                     /locus_tag="VLM90_00575"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HSQ11474.1"
                     /translation="RNYMSDLKQITANIDEDVGIAWLTFNRPEKKNALSVALLAEIAT
                     TLRELANNDKIRCIVTAGAGDSYSSGRDLYDMRGQDNRRRTRGFGGVAEIVDIMRRLP
                     QVTVAKVRGWCLGGGLAMINGHDLVISSDTAKFGMPEVIRGSYGATATPSLFHAGIPF
                     KKAFFISLTGRNLTGVEAERVGLVSDVVPEKDLDSYVDTLAKELASRNGPTLENAKIA
                     AYMQKDLPFDMALRADDLVQHRLRYYTNPLNDVEGYLHSQKGGGTVKYVKPEDRK"
     gene            904..1923
                     /locus_tag="VLM90_00580"
     CDS             904..1923
                     /locus_tag="VLM90_00580"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ11475.1"
                     /translation="MKIRLRCLSLLVVFSVIAWQASSLHSQVTPQSKLIEGAKKESRF
                     VWYTSMAIDLSRPLLDAFTKEYPFLKGEVVRAGNEQITNRVLNETRAGKWAFDLLSIS
                     SAELFVDRGILTPYLSPERDAYIDEFKDPQGHWTSLYNRNLVLMYNTRLVHERDVPKN
                     YLDLLDAKWKGKLLMDSTDYDWFGTLALAWGKTRAVNYMKQLARQDLTWRRGHGLVAQ
                     LIGAGELPLGWAYTFRVERMKKEGAPVDWSDTFDPIVTTVHGIGVSSKAANPNTARLF
                     VDFALSRRSQQMIRDLRLVPSRRDVEPLVAKMDQNRLKVKRIPKEVSLNTDQYAKEFR
                     ELFGL"
     gene            1946..>2340
                     /locus_tag="VLM90_00585"
     CDS             1946..>2340
                     /locus_tag="VLM90_00585"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ11476.1"
                     /translation="MKPTRHVLANLLAIFAFILIQAQWVIAADRIRVGLSSFTPINAA
                     LWIAEEKGLFKKYGIESEVVLIGGASAGGVSSLIAGDVQFLGGGGGVISAALSGADVI
                     MIGAIVNKGVQRVVARSDLRRPEELRGKK"
BASE COUNT          533 a          695 c          662 g          450 t
ORIGIN      
        1 ggagaaatta catgtccgac ctgaaacaaa tcaccgccaa catcgacgaa gacgtcggca
       61 tcgcctggct gaccttcaat cggccggaaa agaaaaacgc cctgagcgtc gccctgctcg
      121 ccgagatcgc gaccaccctg cgcgagctgg cgaataacga caaaattcgc tgcatcgtca
      181 ccgccggcgc cggcgactcc tactcttcgg gccgcgatct ctacgacatg cgcggccagg
      241 acaatcggcg ccgcacccgc ggcttcggcg gcgttgccga gatcgtcgac atcatgcgta
      301 gacttccgca agtcaccgtc gccaaagtgc gcggctggtg cctgggcggc ggtctggcga
      361 tgatcaacgg tcacgatctc gtcatcagct ccgacacggc aaagttcggc atgcccgaag
      421 tgatccgcgg cagctacggc gccaccgcga caccatcgct atttcatgcg ggaatcccgt
      481 tcaagaaagc tttctttatc tcactcacag gcagaaatct caccggcgtt gaagccgagc
      541 gcgtcggtct ggtttccgac gtggtgccgg aaaaagactt ggacagctat gtcgacaccc
      601 tggcgaaaga actcgccagc cgcaacggcc cgaccttgga gaacgccaag atcgccgcct
      661 acatgcaaaa agatttgccc ttcgacatgg cgctgcgcgc cgacgacctc gtccaacacc
      721 gcctgcgcta ctacaccaat ccattgaacg acgtcgaagg ctacctgcac tcgcaaaaag
      781 gcggcggcac ggtgaaatac gtcaagccgg aagatcggaa ataaactagc cttcgtcttg
      841 cggataaagc gcaatgctta gtccatgaca atacggtccg ccgggctatt aaggaggagc
      901 aggatgaaga ttcgcttgcg ctgcctttca ctcctcgttg tcttttcagt tattgcttgg
      961 caggcgtcca gtctgcactc ccaggtcacc ccacagtcca aactgatcga aggcgccaag
     1021 aaggagagcc gattcgtttg gtacacttcg atggccatcg atctttccag gccgttgctc
     1081 gacgccttca cgaaagaata cccgtttctc aagggcgagg tggtgcgcgc cggcaacgag
     1141 caaattacca accgggtgtt gaacgaaacg cgcgcgggca agtgggcgtt cgatctgctc
     1201 agcatcagca gcgctgagct tttcgtcgac cggggaattc ttacacccta tctttcgccg
     1261 gaacgggacg cctacatcga cgaatttaaa gacccccagg gccattggac gagtctttac
     1321 aacagaaatc tcgtgctcat gtacaacacc cgcctggtcc atgaaagaga cgtcccaaaa
     1381 aattatctcg acctgctgga cgccaagtgg aaaggcaaat tactcatgga ctccacggat
     1441 tacgactggt ttggcacact agcgctggcg tgggggaaaa cccgagcggt caattacatg
     1501 aagcaattgg cgcggcagga cttaacctgg cgccgcggcc atgggttggt cgctcaactg
     1561 atcggcgcgg gtgaattgcc actgggctgg gcctatacct tccgcgtcga acgtatgaaa
     1621 aaagagggag cgccggtgga ttggtccgac accttcgatc ccatcgttac gacggtgcac
     1681 ggcatcggtg tcagcagcaa agcggccaac ccgaataccg ccaggctttt cgtcgacttc
     1741 gccctcagcc ggcgcagcca acagatgatt cgcgacttgc gattggtgcc gtcgcgtcgg
     1801 gatgtcgaac ctttggtcgc caagatggac cagaatcggc taaaggtaaa acgtatcccg
     1861 aaagaagtgt cgttgaatac cgatcagtac gccaaagagt tccgtgagct tttcggcctt
     1921 taacggcaag taaccaggag gttcgatgaa acctactcgg cacgtcctcg caaacctgct
     1981 ggcgattttt gctttcatat tgatccaggc gcaatgggta atcgcggccg atcgcatccg
     2041 cgtcggtctc agctccttca cgccgatcaa tgccgcttta tggatcgccg aggagaaagg
     2101 gctgttcaag aaatacggta tcgagagcga agtggttttg atcggcggcg cttccgccgg
     2161 cggcgtgagc tcgctcatcg ccggcgacgt gcagtttctc ggtggcggcg gcggggtgat
     2221 cagcgcggcg ctcagcggcg ccgatgtgat catgatcggc gccatcgtca acaaaggcgt
     2281 gcagcgagtc gtcgcccgca gcgacctcag acggcccgaa gagctgcgcg gcaaaaaaat
//
LOCUS       DATIRS010000051         1697 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1282556, whole genome shotgun sequence.
ACCESSION   DATIRS010000051 DATIRS010000000
VERSION     DATIRS010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1697)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1697)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1697
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1282556"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..626
                     /gene="pheS"
                     /locus_tag="VLM90_00590"
     CDS             <1..626
                     /gene="pheS"
                     /locus_tag="VLM90_00590"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: protein motif:HMM:NF013568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HSQ11477.1"
                     /translation="NFEALNIPQDHPARDMQDTFFVAGGRLLRTHTSPVQIRTMESRK
                     PPLQVIVPGAVYRHDDDATHSPMFHQVEGFMVDENISFADLKGVLTHFLRQIFQRDAG
                     VRFRPSFFPFTEPSAEIDIQCVICGGSGSIKSGQSCRVCKASGWLEILGAGMIDPAVF
                     EFVGYDPEKVSGFAFGMGVERIAMLKYGIDDIRLFFQNDLRFLKQFR"
     gene            714..>1697
                     /locus_tag="VLM90_00595"
     CDS             714..>1697
                     /locus_tag="VLM90_00595"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: protein motif:HMM:NF015448.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HSQ11478.1"
                     /translation="MKFTFNWLKEFVTFSGAPERLAELLTMAGLEVESLTPLREPNTD
                     KQDWLFEVGVTPNRGDCLGIIGIAREVAALAEETLRFPASSAAKKAPATNKRISLKIE
                     APSLCARYSARIVDDLQVAPSPGWMRYRLEACGIRAINNVVDITNYVMLETGQPLHAF
                     DLDRLEAKEIIVRAAGADKKFTTLDGVERKLVAGDLLICNGDIPVALAGVMGGMDSEV
                     RDTTRSVLLESANFAPAAIRRTAKRLALHGEASHRFERGVDPEGTIAALNRAVQLLSE
                     VAGGRPLAGVADLYARKEKAPTISLREERIVRLLGLKIELKRVEKLLKSLGM"
BASE COUNT          344 a          488 c          500 g          365 t
ORIGIN      
        1 acaacttcga ggcgctcaat atcccccaag accatccggc gcgagacatg caggatactt
       61 ttttcgtcgc cggcggccgt ttactgcgca cccatacctc gccggtgcag atccgcacga
      121 tggaaagccg caaaccgccg ctgcaagtga tcgttccggg cgcggtctac cgccacgacg
      181 atgacgcgac ccactcgccg atgtttcacc aagtggaggg atttatggtg gacgagaaca
      241 tctcgttcgc cgatctcaaa ggggtgctca cgcatttctt gcggcagatt tttcagcgcg
      301 acgccggcgt gcgctttcga cccagttttt tcccgtttac agaaccgagc gcggagatcg
      361 acatccaatg cgtcatctgc ggtggcagcg gttcgataaa gtcgggacag agctgccggg
      421 tctgcaaggc ttccggttgg ctggaaatcc tcggcgccgg catgatcgat ccggcggtgt
      481 ttgagttcgt cggttacgat ccggaaaaag tttccggctt cgccttcggc atgggcgtgg
      541 aacgcatcgc catgctcaag tacggcatcg atgacatacg gctctttttc caaaatgatt
      601 tgcggtttct gaagcagttt cggtagacac aggcgaatgg agtggcggag cattggagtg
      661 atgggtttta agagcaatac tccggtactc caatattcta ttactccaat cttatgaaat
      721 tcactttcaa ttggctcaaa gagtttgtga ctttctccgg tgcgccggag cggctcgccg
      781 agttgctcac catggcggga ttggaagtag agtcgctcac tcctctacgc gagccgaaca
      841 cggataagca ggattggctg ttcgaagtcg gcgtcacgcc caatcgtggc gactgtctcg
      901 gcattatcgg cattgcccgc gaagtcgcgg cgctcgccga ggagacgttg cgctttcccg
      961 cttcgagcgc cgctaagaaa gctccggcca ccaacaagcg gatttctctc aagatcgaag
     1021 ccccaagctt gtgcgcccgt tactcggcgc ggatcgtcga cgacctgcag gtcgcgccgt
     1081 cgcctggttg gatgcgttac cgtctcgaag cttgcggcat tcgcgccatc aacaatgtcg
     1141 tcgatatcac caactacgtg atgctcgaaa ccgggcagcc gctccatgcc ttcgatcttg
     1201 atcgcctgga agctaaagaa atcatcgtca gagcggcggg agccgataag aaatttacca
     1261 ctctcgacgg cgtcgagaga aagttggttg cgggcgattt gctcatttgc aacggcgata
     1321 ttcccgtcgc tcttgccggc gtaatgggag ggatggactc cgaggtgcgt gacacgaccc
     1381 gttcggtctt gctcgaaagc gccaactttg cgccggcggc aatccgtcgc acggccaagc
     1441 ggttggcgct gcacggcgag gcctcgcatc gtttcgagcg cggtgtcgat cccgaaggga
     1501 cgattgcggc gttgaaccgc gccgtgcaac tgctcagtga agtcgctggc ggacggcccc
     1561 tcgccggcgt ggccgatctt tacgcccgca aagaaaaagc gccgacgatc tcgctacgcg
     1621 aggaacggat cgtcagactg ctcggtttga agatcgaact gaaacgagtc gagaagctgc
     1681 tcaaatccct cggcatg
//
LOCUS       DATIRS010000052         1646 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1085891, whole genome shotgun sequence.
ACCESSION   DATIRS010000052 DATIRS010000000
VERSION     DATIRS010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1646
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1085891"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1599)
                     /locus_tag="VLM90_00600"
     CDS             complement(<1..1599)
                     /locus_tag="VLM90_00600"
                     /inference="COORDINATES: protein motif:HMM:NF021504.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydratase activase-related protein"
                     /protein_id="HSQ11479.1"
                     /translation="MIPPTPELLGALGIALLALQRAHGALGSATELLTLAAPEMQRTS
                     QFTCGACTMYCSIDHFEVAGRRFPFGGRCSLYENVWKRKTRMVAAPDLVETRSKLLFG
                     RPNGDHPANGSRIGIPKALTAHSLFPLYSTFFAGLGMDVVLSNIDPRGELKSNAGFCF
                     PAQIAHGAVLDLVQRGVELIFLPHVMRMPAREAWKESYLCPITQASPYFLAKAYPQIH
                     LLSPLLDFSDGYAASSALVEMAVNELGQTRAFAERQWTAAVQAQTEAESEVQKLGQAA
                     LAEAIAASKPAIVLAGHSYNAFTPEGSQSVGKKLSSMGVAAIPADCLMPEGAGPTSWH
                     FANQVMNAVNVFKQHANLFLLCVSNFSCTIDAFTQSMLAAELGSKPYLILEIDAHTAD
                     AGVQTRLEAFLDIVRNFRVGQSGLADRFNPARLIAGRQVIRSNGEQVALTDPRVKLYF
                     PNFSQYHSESLAMSVGWLGLHAGAVTPLERRHLGRGLQYTSGRECLPLPICIGQLLDI
                     HEQRAAGEIAGFYMLEGGAPCVIDA"
BASE COUNT          341 a          487 c          511 g          307 t
ORIGIN      
        1 ggcatcgatg acgcaaggcg cgccgccttc cagcatgtag aatccggcga tctcgccggc
       61 cgcgcgctgc tcgtgaatat ccaacaactg gccgatgcaa atcggcaagg gcaggcactc
      121 ccgtcccgac gtgtattgca aacctctgcc cagatgacgg cgctcaaggg gcgtcaccgc
      181 tcccgcgtgt aagcccaacc agccaaccga catcgccaga gattccgagt ggtactgcga
      241 aaaattgggg aaatagagct tgacccgcgg gtcggtgagc gccacttgtt cgccgttgct
      301 gcggatcact tgccggccgg cgataagtcg agccgggttg aatcgatcgg caaggccgct
      361 ctggccgacc cggaagtttc tgacgatgtc gaggaaggct tccaagcgtg tttgcacgcc
      421 ggcgtcggcg gtgtgggcgt cgatttcgag aatcagatag ggcttggagc ccaactcggc
      481 agcgagcatc gattgggtga aggcgtcaat ggtgcaacta aaattgctca cgcagaggag
      541 aaacagattg gcatgctgtt tgaagacgtt taccgcattc atcacctggt tagcgaagtg
      601 ccacgaggtc ggcccggcgc cttccggcat aaggcagtct gcgggaatcg ccgccacacc
      661 catgctcgag agtttcttgc ccactgactg cgagccttcc ggagtgaaag cattgtagct
      721 gtggcccgcc agaacgatcg ccggcttgct cgcagcgatg gcttcggcca aggcggcttg
      781 tcccaacttt tgcacttcgg actcggcttc ggtttgcgcc tggacggccg ccgtccactg
      841 ccgctccgcg aacgcacgag tttgtcctag ctcattcacg gccatttcca ccaaggcgga
      901 gctggcggca taaccgtcgc tgaagtccag cagtggcgag agcagatgaa tctgcgggta
      961 agccttggcc aggaagtagg ggctcgcctg ggtgatcgga cataagtaag attctttcca
     1021 agcttcgcgc gccggcatgc gcatcacgtg gggcaggaag atcagctcga caccccgttg
     1081 aaccaagtcc aagactgcac cgtgggcgat ctgcgcggga aaacaaaagc cggcattcga
     1141 cttgagttcg ccgcgcgggt cgatgttcga caggaccacg tccatgccca aaccggcgaa
     1201 gaacgtcgaa tagaggggaa acagcgagtg cgcggtcagc gccttgggga taccgatgcg
     1261 gctgccgttg gctgggtgat caccattggg ccgcccgaaa agtagtttgc ttctcgtctc
     1321 aactagatcg ggcgccgcca ccatgcgggt ttttcgtttc caaacattct catacagact
     1381 gcaacgcccg ccgaagggaa agcgccgtcc ggccacttcg aaatggtcga tgctgcaata
     1441 catcgtacag gcgccgcaag tgaattgact ggtgcgctgc atttccggcg ccgccagggt
     1501 caaaagctcc gtcgcgcttc cgagcgcgcc gtgcgctcgt tgcagcgcga gcagggctat
     1561 acccaacgcg ccgagcaact ccggggtagg tggaatcacg acttggcggc cgacactatg
     1621 agcgaaagca tggccgatag cgcgat
//
LOCUS       DATIRS010000053         1743 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1774218, whole genome shotgun sequence.
ACCESSION   DATIRS010000053 DATIRS010000000
VERSION     DATIRS010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1743
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1774218"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            16..1305
                     /locus_tag="VLM90_00605"
                     /pseudo
     CDS             16..1305
                     /locus_tag="VLM90_00605"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
     gene            1305..>1743
                     /locus_tag="VLM90_00610"
     CDS             1305..>1743
                     /locus_tag="VLM90_00610"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HSQ11480.1"
                     /translation="MAQAAQQEEVLGKAYDLRLIRRLWKFIIPYKRLFFFTMLLLPLQ
                     QAFGVAQPYLMKIGIDQYIAGKDLWGLQNVMLLFLAALIGETVAAFAHHYFSMLVAQR
                     CLADLRAAVFAHVQKLPMSYFDRNPVGRLVTRMTTDVDVLQEMF"
BASE COUNT          336 a          493 c          544 g          370 t
ORIGIN      
        1 ggcctgatgc tgtcgatgga cgtgcgcatg acgttggcgg cgttggcgcc atttccgttg
       61 ttgatgtttg tcgcccgcgt gtttcgcggc agaatcatga agagctccct ggaagtacag
      121 cagcagatgt cggtgttgag cagccatgtg caggaaaact tgagcggcat gcatgtggtt
      181 aaagcttact cccaggagga ttttcaaact cagcaattca tcggcctcaa caaagactac
      241 gaaatcaaaa gcatgcagat ggccaagatg cgcggcatcg tcaatccggt gatgcagggc
      301 attaacggcc tcacggtgct gatcgtcatt tggtacggcg gcgtgcgagt gttgcgcggc
      361 gatttgctgg tggccgatat cgtcgccttc atcgcctacc tgaacgtttt agcctggccg
      421 acggcggcct ttggctggat gctctcgctg gtcgagcgcg ggcgggcggc gatgcggcgg
      481 ctcgaggaaa ttctcgaaac cgagccggcc atcgccagcc caccggcgcc ggtgcccgcc
      541 catgggctca aagacggcat cgagtttcgc aatgtctcgt tcgcttacaa tagccagcgc
      601 aacggccact cggccctcaa agggatcaat ttcaagcttg cggtcggcaa atcggtcgga
      661 ttggtcggtc gcatcggttc gggcaagagc actgtggcgc aattggtgcc gcgcctgttc
      721 gacgtcggca gcggcgagat tcttctggac ggccgcaacc tcacccagct agcgctttcg
      781 gatctgcgtc ggatgatggg ctatgtgccc caggacccgt ttctattttc gaactagctg
      841 cgccgcaata tcgccctggg ccgtgaagag tatagcgaag aagagctcga gcgggcgatc
      901 aagatcgcca agctcgaccg cgatttggag atctttccca aaggtttgga aaccatggtc
      961 ggcgagcgcg gcgtgacgct atccggcggg caaaagcagc gggcgacgct ggcgcgggcg
     1021 ctcctgatgg actcgccggt gctggtgctg gacgactgtt tgtcgagcgt cgacgcccaa
     1081 accgaggcgg agattctcgc cggactgcgg ccctttctca aggaaaaaac ctgcctgatc
     1141 atttcccacc gcatctcagc ggtgaaagac gccgatgaga tcctcgtgct cgacggcggc
     1201 aagatcatcg agcgcggcga tcacgaagca ttggtgcgcc gtggcggcgt ctacgccgat
     1261 ctctaccagc agcagcgctt gagcgaggag ctcgaacaaa tctaatggcc caggccgcgc
     1321 agcaagaaga agttctcggc aaagcctacg acctgcggct gatccggcgc ttgtggaaat
     1381 tcatcattcc gtacaaacgg ctgtttttct tcaccatgct gcttttgccc ttgcaacagg
     1441 ccttcggcgt ggcgcagccc tacctgatga agatcggcat cgaccagtat attgccggca
     1501 aggatctgtg gggcttgcag aatgtcatgc tgttgtttct cgccgcgctg atcggcgaga
     1561 cagtggcggc gtttgcgcac cactatttct ccatgttggt agcgcagcgc tgtttggccg
     1621 acctgcgggc ggcggtgttt gcccacgtgc agaaattgcc gatgagttac ttcgaccgca
     1681 acccggtggg ccggttggtg acgcgcatga ccaccgacgt cgacgtgctc caggaaatgt
     1741 ttt
//
LOCUS       DATIRS010000054         1532 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1774280, whole genome shotgun sequence.
ACCESSION   DATIRS010000054 DATIRS010000000
VERSION     DATIRS010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1532
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1774280"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..298
                     /locus_tag="VLM90_00615"
     CDS             <1..298
                     /locus_tag="VLM90_00615"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSQ11481.1"
                     /translation="SVGANSVGTARVVWHRGAAKIGRMAGLKSYRRRGVGRRLLTRAV
                     AVARRSHARRIYLHAQVAVSGFYERLNFRGTGSIFDEAGIAHRKMIWRGRLSDR"
     gene            723..>1532
                     /locus_tag="VLM90_00620"
     CDS             723..>1532
                     /locus_tag="VLM90_00620"
                     /inference="COORDINATES: protein motif:HMM:NF033768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AgmX/PglI C-terminal domain-containing protein"
                     /protein_id="HSQ11482.1"
                     /translation="MEYSQAIVLHGNKRCIELRENAIVSIPGLLEASPAAPDMAKLTA
                     KIRAMTIAMVGLLAMPLCGLMAGDENLWAKLQALIETERVTKTQSTVLAVDTLGLSVR
                     SKSASASTKEFFEQAAMEHLARLHHTFNSWSDRKQELMGSVSLKLMVDAAGNVVRVEP
                     VNSHVNNSSFVKTVIDDVREWKFPKGSAEAAEITVPLLFIPKGMDPEMIVQWERQVRR
                     APGDDDAPRPLPIAMARTAVNVAEKVADLTAATPMRIEHEQKSVAAAPAQRQ"
BASE COUNT          341 a          422 c          462 g          307 t
ORIGIN      
        1 ctccgtcggc gccaattcgg ttgggacggc aagggtggtg tggcatcgcg gcgccgccaa
       61 gatcggccgc atggcggggt tgaaaagcta ccggcgcaga ggcgtgggcc ggcggttgct
      121 aacgcgggcg gtggcggtcg cgcgacggtc gcacgcgcgt cggatttact tgcacgcaca
      181 agtcgccgtg agcggtttct acgagcgcct aaactttcgc ggcaccggat cgatcttcga
      241 cgaagcaggc atcgcccacc ggaaaatgat ctggcgcggg cgcctgtcgg atcgttaacg
      301 acgggtcaat cacaccagtc gagcaaagcc aggaagtgtc ccgtcatatc gaagatcaat
      361 tccgccgcgt ggttccggtg gcgcggtttg ctaaacgccg gacctgagtg ggtcaagtcc
      421 cgtagccgaa agttcccaaa tcacgccgaa atatctctag attgccgatt tgcttgttca
      481 gtttctcact gtgacggtcc aattcggtcg gtccatcttt cgtagaactt ccagaagtgc
      541 gaatttcttc ctagcctcac cgaggttcaa ttggcctcac cgttgctacc ttgtctcggc
      601 gacgactcaa tcgcaaagtt tcctaactaa tcataaccat cccggcagtc ggcaatttag
      661 cgcgcatgcg ccattgaaac tcaatgggct gacagtgtcg ccgggagaaa ttggagggac
      721 ccatggaata cagtcaagca atcgtgctcc acggcaacaa aagatgcatt gaactcagag
      781 aaaatgccat cgtttcgatc cctggtttat tggaggcaag tccagcagcg ccggatatgg
      841 cgaaactgac agcaaagatt cgcgcgatga ccatcgccat ggtcggactc ctagcgatgc
      901 cgctttgcgg tctgatggca ggggacgaaa atctctgggc aaagctccag gctttaatcg
      961 agacggaaag agttacaaag actcagagca cggtgttagc cgtggacacc ctgggcctga
     1021 gtgtgcgctc gaaaagcgct tcggcgtcga ccaaagagtt ttttgaacag gcagcgatgg
     1081 aacatctcgc ccggctgcac cacacgttca atagctggtc cgatcgtaag caggagctga
     1141 tgggtagtgt gtcgttgaag ctcatggtcg acgctgccgg caatgtggtg cgcgtcgaac
     1201 cggtgaattc tcacgtcaac aattccagct ttgtcaaaac cgtgatcgac gatgtgcgtg
     1261 aatggaaatt ccccaagggc agcgccgaag cggcggagat caccgtgccg ctcttgttca
     1321 ttcccaaagg aatggaccca gagatgatcg tccaatggga gcgccaagtg cgccgcgcgc
     1381 cgggcgatga cgatgcgccg cgtcctttgc cgattgcgat ggcgcggacg gcggtcaacg
     1441 tggctgaaaa agttgctgac ctcacggccg ccacgccgat gcggattgag catgagcaaa
     1501 aatccgttgc cgcggcgccg gcacagcggc ag
//
LOCUS       DATIRS010000055         1725 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1086090, whole genome shotgun sequence.
ACCESSION   DATIRS010000055 DATIRS010000000
VERSION     DATIRS010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1725
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1086090"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..267)
                     /locus_tag="VLM90_00625"
     CDS             complement(<1..267)
                     /locus_tag="VLM90_00625"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSQ11483.1"
                     /translation="MLKRIAVVDDDPTMRVALGEALGGLGHGVEIFANGDEAQAHLLR
                     EGADLVISDVRMPGLSGLELLKRFHQLRFILISGFATVPQAVDAM"
     gene            complement(261..1544)
                     /locus_tag="VLM90_00630"
     CDS             complement(261..1544)
                     /locus_tag="VLM90_00630"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSQ11484.1"
                     /translation="MTPGPIINSHRSTSIVTPLAHPAGNVESLNSLIGWFNHNSVELI
                     DEYRRLEERLDYLKNQLEVKNRELEKSLQAREQARAYLLSVLESLKGGVAVLDHELHP
                     TFVNRRLTELAGKVNDQRIRQWLGDKLVASLQGGDNRFLPFECEKVVQGPDGAMVPVH
                     FSVAEVATGDPASHYVLVFQDVTTLKRMEAEAARTRRLASLGMMASELAHQVKNPLGG
                     IELCASLLKEKSTGDGQRLAGEILGATRRLSTTVSKLLAFAAEPAIASDVLSVATLMK
                     DVLQECVALFDDPAWSIVVDIERELPPVWGDRGLLVQALVNLIVNAKEAMPKGGRVCL
                     KARLSPFSTLNGQIHKAVEIKVRDHGVGIAAEDREHIFDPFFSTKSQGTGLGLAFAHK
                     IISAHRGSIEIASLLQTGSEFTIGLAAAEEIGAAC"
BASE COUNT          357 a          518 c          488 g          362 t
ORIGIN      
        1 catggcatcg acggcttgcg gcacggtggc aaaaccgctg atgagaataa atcgcagctg
       61 gtggaagcgc ttcaataact cgaggccgct caaccccggc atgcgcacgt cgctgatgac
      121 cagatcggcg ccctcgcgga gtaaatgtgc ttgggcctcg tcgccattgg caaaaatttc
      181 taccccatgg ccaagcccgc cgagcgcctc gccgagcgcc acgcgcatgg tcgggtcgtc
      241 gtcgacgacg gcgatacgct tcagcatgcg gcgccaatct cctcggcggc tgccaagcca
      301 atggtaaatt cgctgccggt ctgcagcaaa gaggcaattt caatggagcc gcggtgggcg
      361 ctgataattt tatgagcgaa tgccaatccg agaccggttc cctggctctt ggtgctgaaa
      421 aacggatcga aaatatgctc gcgatcttcc gccgcgatgc cgacgccgtg atcgcgcacc
      481 ttgatttcaa cggccttgtg gatctgcccg ttgagcgtcg agaacggtga cagccgcgcc
      541 ttcaagcaca cccggccacc cttgggcatg gcttccttgg cgttgacgat caggttgacc
      601 aaggcttgca cgagcagacc gcgatcgccc cacaccggcg gcagttcgcg ctcgatgtcg
      661 acaacgatcg accacgcggg atcgtcgaac agagcgacgc actcttgcaa aacatctttc
      721 atcagggtgg caaccgataa aacatccgac gcgatcgcgg gctccgcggc gaaagctaac
      781 agcttggaca ccgtcgtcga cagacgtcga gtagcgccga ggatttcgcc ggcgagccgc
      841 tggccatctc cagtcgactt ttccttcaag agcgaggcgc acagctcgat gccgccaagg
      901 ggatttttta cttgatgcgc caattcggat gccatcatgc cgagggacgc caaccggcgc
      961 gtgcgcgccg cctccgcctc catgcgtttc aacgtcgtga catcttgaaa caccagcaca
     1021 taatggcttg ccggatcgcc ggtggcgacc tcggcaacgg agaaatgcac cggcaccatc
     1081 gcaccgtccg gtccctggac tactttttca cattcgaaag gcagaaagcg gttgtcaccg
     1141 ccctggaggc ttgcaaccaa tttgtcgccc agccattggc ggatgcgctg gtcgttgacc
     1201 ttgccggcga gctcggtcag acggcgattg acgaaggttg gatggagttc gtggtcgagc
     1261 accgcgaccc cgcccttgag actctcgagt actgacagca agtacgcccg cgcttgttca
     1321 cgcgcttgca aacttttctc gagttcgcga ttctttacct ccaactgatt ttttaagtaa
     1381 tcgaggcgct cttcaagccg gcgatactca tcgatcagtt ccacgctgtt gtggttaaac
     1441 cagccgatca agctgttgag cgattcgaca ttccctgcgg gatgggccag cggcgttaca
     1501 atggaggtac tcctgtgaga atttatgatc ggtccaggcg tcattatttc accgttgagc
     1561 aagcgttatg ttagtggata ttgtaacttg accgcgatta tatcgctgac tttgctaggc
     1621 ttccgccggc atgggcactg gcaaattcca attgggaaag agcggtgccg tcaatgaaat
     1681 attcgcctcc gccattttcc cgacgctcgc ggagcgcatc acggc
//
LOCUS       DATIRS010000056         2502 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_889445, whole genome shotgun sequence.
ACCESSION   DATIRS010000056 DATIRS010000000
VERSION     DATIRS010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2502
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_889445"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(191..619)
                     /locus_tag="VLM90_00635"
     CDS             complement(191..619)
                     /locus_tag="VLM90_00635"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSQ11485.1"
                     /translation="MASSKIFLVPVDFSRGAERAFDYARGLARENRAKLVALNVVPAE
                     LIYPPTGGQFDFYGLMERDARDRFAKLAKRKGVKPAECRLVLARGTDFADVIVRQAKK
                     LRAAMIVMGCHGRTGLRRFLLGSVAERTLRYADCPVLIVK"
     gene            complement(641..2332)
                     /locus_tag="VLM90_00640"
     CDS             complement(641..2332)
                     /locus_tag="VLM90_00640"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSQ11486.1"
                     /translation="MAEQETLFNPLETESQETAPAPGMKRPGTAMESHEATYADSHLI
                     ELDLDKYVDDFNRRVIGAYQEGKGSAVLPADLGVARSLIPPGTGALRDFSYIAPEIPE
                     FDFAKCVGCMSCVTECPDTAILGKAIPAARVERALAEIDDEKERAWVGSHWARTRKYF
                     DLPEKKGEDGALFGIFIDPTKCKGCAECVQVCDDLEYHALKMVPKDEQTLPRYRAAFN
                     LFRQIGPTPRSYINEKALADFMLDEASALLYVGGAGSCMGCGEATAIRMMLAATGFVY
                     QPENIGIVASTGCNTVYGSTYPYNPYLVPWTNSLFENAPADAMGIRARWDQMGWQQRK
                     LWVIGGDGAMYDIGFQSLSRMLTSAMDINVLILDTQAYSNTGGQASTASFPGQDAKMA
                     SFGKASPGKRERRKELAQICMMHPDIYVAQTTAAHINHFYKAIMEANEYPGPAVVNVY
                     TTCQPEHGVPDCNSSHQAKLAVESRAFPLFIYDPRKGDKLRERLSLVGNPAQKQDWWT
                     PPNGDKPFQFVDFARTEGRFAKQFGADGAPSETLLHAQADRVKNWRLLQELAGLR"
BASE COUNT          496 a          801 c          691 g          514 t
ORIGIN      
        1 cacccgccgg cggatatctc cgccatcgag gatcttttgc tgcgcgtcgc ccgcctcgtt
       61 gaagaaatac ccgagatcac ggaattagat ttgaatccgg tcatagccct gccgcccggc
      121 caaggctgtt gcatcgtcga cgcgcgcatc cgcgtttcgt cattcgagta gaaccgcccc
      181 ggcggtcgcc ctacttcacg atcagcaccg gacaatcggc ataacgcagc gtccgctccg
      241 ccacactgcc caagagaaac cgccgcaagc cggtccggcc atgacaaccc atgacgatca
      301 tcgcggcgcg taattttttg gcctgacgaa cgatcacatc cgcgaagtcg gtgccacgtg
      361 ccaagacgag ccggcactct gccggtttga cgcctttgcg cttcgccaac ttggcaaagc
      421 gatcgcgcgc atctcgctcc atcagaccgt agaagtcgaa ttgtccgccg gtgggcggat
      481 agatcaactc tgccggcacg acgtttagcg ctaccagctt ggctctattt tcgcgcgcca
      541 gcccgcgcgc gtaatcgaag gcgcgctccg cgccacgaga aaaatccacc ggcacgagaa
      601 atatttttga acttgccata acaccccccc attgccgtca tcagcgcaat cccgccagct
      661 cctggagcag acgccagttc ttgacccggt ccgcttgggc atgcaacagc gtctccgacg
      721 gtgcgccatc ggcgccaaac tgcttggcga accgtccctc ggtgcgggca aagtcgacaa
      781 attgaaacgg cttgtcgcca ttgggcggcg tccaccaatc ctgtttctgc gccggattgc
      841 cgaccaagct caagcgctcg cgcagcttat cgcctttgcg cgggtcgtaa ataaacagcg
      901 gaaacgcccg gctctccacc gccagtttgg cttggtgcga agaattgcag tccggcacgc
      961 catgctcggg ctggcaggtg gtgtaaacat tgaccaccgc cggtccggga tattcgttgg
     1021 cttccatgat cgctttgtaa aaatggttga tgtgcgccgc ggtggtctgg gcgacataaa
     1081 tatcaggatg catcatgcaa atctgtgcca gctccttgcg ccgctcgcgt ttgcccggtg
     1141 acgccttgcc gaaggacgcc atcttggcat cctgcccggg gaaagacgcc gtggacgcct
     1201 ggccgccggt gttggaatag gcttgggtat cgagaattag cacgttgatg tccatggcgc
     1261 tggtgagcat gcggctcaag ctttgaaaac cgatatcgta catggcgccg tcgccgccga
     1321 tcacccagag cttgcgctgc tgccagccca tttgatccca gcgcgcgcga atgcccatgg
     1381 cgtccgccgg cgcgttttca aatagcgaat tggtccaagg caccagatac gggttgtacg
     1441 gataggtcga gccataaacg gtgttgcatc ctgtcgacgc aacgatgccg atgttctccg
     1501 gctgatagac gaaaccggtg gccgccaaca tcatgcggat cgccgtcgcc tcgccgcagc
     1561 ccatgcaaga gccggcgccg ccgacataga gcaacgccga tgcttcatcg agcatgaagt
     1621 ccgccaaggc cttctcattg atatagctcc tcggtgtcgg gccgatctgg cgaaacagat
     1681 tgaacgcggc gcgatagcgc ggcaaggttt gctcatcctt gggcaccatc ttgagcgcgt
     1741 gatattctag gtcgtcgcac acctgcacgc actccgcgca gcctttgcac ttggtcgggt
     1801 cgatgaagat gccgaagagc gcgccatcct cgcctttttt ctccggcaga tcaaaatatt
     1861 tgcgcgtgcg cgcccaatgg gagcccaccc acgcgcgctc cttctcgtcg tcgatctcag
     1921 cgagagcgcg ctccactctt gcggcgggaa tcgctttgcc gagaatcgcc gtgtccggac
     1981 attcggtgac acagctcatg cagccgacgc acttggcaaa atcgaattca ggaatctccg
     2041 gcgcgatgta actgaaatcg cgcaacgcgc cggtgccggg cggaatcaaa ctgcgcgcca
     2101 cgccgagatc ggccggcaac acggccgagc ccttgccctc ctgataggcg ccgatcacgc
     2161 gccggttgaa gtcgtcgacg tacttgtcga gatcgagctc gatcagatgg ctgtcggcgt
     2221 aggtcgcctc atggctctcc atcgcggtac ccggccgttt catgcccggc gccggcgcag
     2281 tctcctgact ctccgtctca aggggattaa acagtgtctc ttgttccgcc ataacgatat
     2341 ctcacagcaa accgcttatt aatttttgaa tttttaattg tcatcatcca catgtttcgc
     2401 caaatcggtc accgacaata taccgaccgg tttgatatgc ccgtcgactc gctccgcgac
     2461 caccagccga tgaatgtgct tttcattgag cagcagcacc gc
//
LOCUS       DATIRS010000057         1992 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1479511, whole genome shotgun sequence.
ACCESSION   DATIRS010000057 DATIRS010000000
VERSION     DATIRS010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1992)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1992)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1992
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1479511"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            164..>1992
                     /locus_tag="VLM90_00645"
     CDS             164..>1992
                     /locus_tag="VLM90_00645"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSQ11487.1"
                     /translation="MRFIGERVAAVAADTLEQADAALELIEVQYEDLPAVFDPVAAAK
                     DDAPLVHPDMNSYKGLPKQFDEPTNAFVQDVFTRGDVASGFAQADVIVENTYTVPRVH
                     QGFLEPHCCLVWIDEQERIQMWSPCKVPQGLKSSMAAAFDIPKDKIRVNPVTIGGDFG
                     GKGAPIDEPICYLLALRSGRPVKMVMEYREEFIAGAPRHAGVMRLKTGVKRDGTIVAH
                     EMEAFLDAGAYGGFRPGAVIGGVAHAGGCYRAAHARIAVSRVYTNNLPGGQFRAPGEP
                     QGVFAAESHIDCVAHKVGMDPAAFRLQNLMQEGDETLTGSHYKDIKAKETLSAALKAS
                     GYDGPKAKNVGRGVAMGYRGPGGGNTAMQLSLNPDGSIVIHTGLFEQGTGTYTTLRQI
                     GAEVLGCDPEKILIDTLDTDLGVSFDSGIGGSRGTRVASGAAYTAACDAREKLLALAE
                     KLLGWPKAEITLAGEFLMRQKKRQRWDELLRRVGRSISGEAVTRDDGHSPVTAFAAQV
                     AEVSVDPATGEVTLRKLTTAHDTGAIMNPVGHQGQIDGGVVQGVGYGLIEYLPVQDGR
                     VEVANFGEYKIPNIQDIPPLKTVIVESASGVGPYKVKGIGENP"
BASE COUNT          388 a          600 c          664 g          340 t
ORIGIN      
        1 caagacggaa atgtcccgat agcgccggcc atagagaatg ccgcgcacgt cattgccggt
       61 cagaaccgcg cgcacccccg gcgcctgctc ggcgcggcta gtgtcgatgc gcacaatccg
      121 cgcatgagcg tggggactgc gcaacgtctt ggcccaggac aaggtgcgct tcattggcga
      181 gcgagtggcg gcagtggcgg cggatactct cgagcaggcc gacgcggcgt tggagttgat
      241 cgaggtccag tacgaagatc tgccggcggt gttcgatccg gtggcagcgg caaaggacga
      301 tgcgccgctg gttcaccccg atatgaatag ctataagggc ttgcccaagc agttcgacga
      361 gccgaccaac gctttcgtcc aggatgtgtt tacccgcggc gatgtcgcga gcggcttcgc
      421 ccaggccgat gtcatcgtcg agaacaccta caccgtgccg cgggtgcatc aggggtttct
      481 cgaaccccat tgctgcctcg tctggatcga cgagcaggag cgcattcaga tgtggtcgcc
      541 gtgcaaggtg ccgcaggggt tgaagtcgag catggcggcg gccttcgata ttcccaagga
      601 taaaatacgc gtcaatccgg tcaccatcgg cggcgatttc ggcggcaagg gcgcgcccat
      661 cgacgagccg atttgctatc tgctggcgtt gcgcagcggc cggccggtga agatggtgat
      721 ggaatatcgc gaagagttca tcgccggcgc gccgcgccac gccggcgtga tgcgtttgaa
      781 aaccggcgtc aagcgcgacg gcaccatcgt cgcccacgag atggaagcgt ttctcgatgc
      841 cggcgcctac ggcggttttc gtcccggcgc ggtgatcggc ggcgtcgctc atgcgggcgg
      901 ctgttatcgc gccgcccatg cgcggattgc ggtttcgcgg gtttacacca acaatcttcc
      961 cggcggccag ttccgcgcgc cgggcgaacc ccagggcgtg ttcgcggcgg agtcgcacat
     1021 cgattgtgtc gcgcacaagg tcggcatgga cccggcggca tttcgcttgc aaaacctaat
     1081 gcaagaaggg gacgagacgc tcaccggcag tcactacaaa gacatcaaag ccaaggaaac
     1141 gctgtcggcg gcgctgaagg cgtccggcta cgatgggccg aaagcgaaga acgtcggccg
     1201 cggtgtggcg atgggttatc gcggtcccgg cggcggcaac acggcgatgc agctttcgct
     1261 caaccccgac ggatctatcg tcatccacac gggtctgttc gagcagggca cgggaactta
     1321 cacgacactt cgacagatcg gcgcggaagt gctgggctgc gatccggaga aaattctcat
     1381 agacaccctc gacaccgatc tcggcgtctc tttcgattcg ggtatcggcg gcagccgcgg
     1441 caccagggtc gccagcggcg cggcttacac cgcggcgtgc gacgcccgcg agaagctgct
     1501 cgcgttggcc gagaagctgc tcggttggcc caaggcggaa attactcttg ccggcgagtt
     1561 tctgatgcgc cagaagaagc ggcagcgctg ggatgaatta ctccggcgcg tcggccggtc
     1621 gatcagcggc gaagcggtga cccgcgacga cggtcattcg ccggtgaccg cgtttgccgc
     1681 gcaggtcgcg gaagtctcgg tcgatcccgc tactggggaa gtgacgctgc gcaagttgac
     1741 caccgcccat gacaccggcg cgatcatgaa cccggtgggc catcaaggac agatcgacgg
     1801 cggcgtggtg cagggcgtcg gttacggctt gatcgaatac ctgccggtgc aagacggcag
     1861 agtcgaagtg gccaacttcg gcgaatacaa aattcccaac atccaagata ttccaccgct
     1921 aaaaaccgtc atcgtcgaga gcgccagcgg cgtcgggccg tacaaagtca aaggcatcgg
     1981 cgaaaatccg at
//
LOCUS       DATIRS010000058         3610 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_201356, whole genome shotgun sequence.
ACCESSION   DATIRS010000058 DATIRS010000000
VERSION     DATIRS010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3610)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3610)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3610
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201356"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(181..552)
                     /locus_tag="VLM90_00650"
     CDS             complement(181..552)
                     /locus_tag="VLM90_00650"
                     /inference="COORDINATES: protein motif:HMM:NF015048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hotdog domain-containing protein"
                     /protein_id="HSQ11488.1"
                     /translation="MAEPSDPTLRVTMLPRDTNARGTIFGGVILSHIDLAGGIAAARR
                     AARNFVTRAMREVEFIAPVYVGDVVSFYTTVIREGNTSVTVQVSIEAERAKDPALRVK
                     VTEAEVIYVAVDEAGKPIPLR"
     gene            complement(607..1527)
                     /locus_tag="VLM90_00655"
     CDS             complement(607..1527)
                     /locus_tag="VLM90_00655"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: protein motif:HMM:NF005146.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transaminase"
                     /protein_id="HSQ11489.1"
                     /translation="MSLKTEKIWMDGALVPWEDAKIHVLSHGLHYGTGYFEGIRCYEL
                     ADGRSAVFRLQEHMQRLVDSGKILGFPLPYSIEQMCQATVEVIRANHLKACYVRPLAF
                     LGLGELGIYAPNNPVNVCIAVWPWGAYLGDDGIKNGIRAKVSSYTRHHVNATMTKSKT
                     SANYVNSVLAKAEVKKAGYDEAIMLDTEGYVSEASGENIFIVRHGKIKTTPLTSILPG
                     ITRESIITLARDKGYQVVEERFTRDELYIADEAFFTGTAAELTPIREVDDRQVGAGRR
                     GPVTEDIQHTFFDVIKGKAAEKYASWLYPV"
     gene            complement(1667..1936)
                     /locus_tag="VLM90_00660"
     CDS             complement(1667..1936)
                     /locus_tag="VLM90_00660"
                     /inference="COORDINATES: protein motif:HMM:NF012442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HSQ11490.1"
                     /translation="MTKGELVDAVAKSANITKLAAGEAVDATFEGIAKAIRKHKRFQV
                     PGFGTFTVRSRKARKGVNPQTGDVISIKASRTVGFKAAPVLKKGL"
     gene            complement(2048..2959)
                     /locus_tag="VLM90_00665"
     CDS             complement(2048..2959)
                     /locus_tag="VLM90_00665"
                     /inference="COORDINATES: protein motif:HMM:NF014587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA phosphatase family protein"
                     /protein_id="HSQ11491.1"
                     /translation="MDVGTNTILCLIADIRDTGRFRVLDDLAEIAGLGRGVDQTGMIG
                     AAGEARALEILGRYRDRCRDLGVEAITAVGTSALRDAKNSDEVRERIRSALGIDIRVI
                     SGAEEAAYSFLAVQRGLSLLGQELLVIDIGGGSTEFIRGNEDGVTRAASIDVGSVRLT
                     EHYLHADPVHPAEFAAMAAAVDVALAPIAAAFSSQASSLALVGIAGTFTTLAAIEKRL
                     ARYSHSQVHGSVLTLAEVQRQVALLQEKSITQRQQIVGLEPKRADVIFAGAYLIEKIM
                     ESFGASQVVVSDQGVRYGLLHEAAKTL"
     gene            complement(2980..>3610)
                     /gene="trmFO"
                     /locus_tag="VLM90_00670"
     CDS             complement(2980..>3610)
                     /gene="trmFO"
                     /locus_tag="VLM90_00670"
                     /inference="COORDINATES: protein motif:HMM:NF003739.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methylenetetrahydrofolate--tRNA-(uracil(54)-
                     C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO"
                     /protein_id="HSQ11492.1"
                     /translation="AVGLIDPRTGNRPYAVVQLRQENRQRTLYNLVGFQTKMTYPEQR
                     RVLAMIPGLANAEFVRLGSLHRNTFINAPQHLTPTLQWRQRESLFFAGQMTGVEGYIE
                     SAAMGMLAGINAARLLAALPPLVPPPTTALGALLRYITDPERKRFQPMNVNFGLLPSL
                     SVRLRGKAKKEMHSQRALADLAAWLGHTGLVNGAAEFHDPIDAATAALP"
BASE COUNT          729 a         1110 c         1024 g          747 t
ORIGIN      
        1 tgccgctggc gatccttgat ctcgtcgagg agctgcgcgc cattgtgctt gtccttggca
       61 tcgtcggcga actgcaccgg aatatcgagc atcgctttga gcagcgggcg cgccggcggc
      121 tatacggatc tggcagcttg aatcaactta ctggggtatc ttatggagcc ccgcgaatcg
      181 ctatcttagc ggaatcggct taccggcttc gtcgacggca acgtagatca cttcggcctc
      241 ggtcactttc acgcgcagtg ccgggtcctt ggcccgctcc gcctcgatgc ttacctgcac
      301 cgttaccgaa gtgttcccct cgcgaatcac ggtggtgtag aaactcacga catcgccgac
      361 gtacaccggc gcgatgaact cgacctcgcg catcgcccgg gtgacgaagt tccgcgccgc
      421 ccggcgcgcc gctgcgatcc ctccggccaa gtcgatatgg ctcaaaatca cgccgccgaa
      481 gatcgtgccg cgcgcgttgg tatcgcgcgg cagcatggtc acccgcagtg tcggatcgct
      541 gggctcagcc atctgtgaat taatcgaagt ttgcggtcaa tttcacctaa aaatttccgg
      601 cgagaatcac acgggataga gccagctggc gtatttttcc gcggccttcc ctttgatgac
      661 atcgaagaag gtatgttgaa tatcctcggt caccggaccg cgccggccgg cgccgacctg
      721 gcggtcgtcg acttcgcgga tcggcgtcag ctcggccgcc gtaccggtaa aaaacgcttc
      781 gtccgcgatg tagagctcat cgcgcgtgaa gcgttcctcg acgacctggt aacctttgtc
      841 gcgcgccaag gtgatgatcg attcccgcgt gatccccggc aggatcgatg tcaacggcgt
      901 ggttttgatt ttgccgtggc gcacgatgaa aatattttcg ccgctcgcct ccgagacata
      961 gccttcagtg tcgagcatga tcgcttcgtc gtagccggcc tttttcactt ccgctttggc
     1021 gagcaccgaa ttgacgtagt tcgccgaagt cttgctcttg gtcatggtcg cgttgacatg
     1081 gtgccgggtg taggacgaca ccttggcgcg aatgccgttc ttgatgccat cgtcgcccag
     1141 gtacgcgccc cacggccaca ccgcgatgca cacgttgacc ggattgttgg gcgcgtaaat
     1201 gcccaattcg ccaagaccga gaaatgccaa gggccgaacg tagcaggcct tgagatggtt
     1261 ggcgcgaatc acttccaccg tcgcctggca catctgctca atggaataag gcagcggaaa
     1321 tccaagaatc ttgcccgagt cgacgagccg ctgcatatgt tcttgcaggc gaaatactgc
     1381 cgagcgaccg tcggccaatt cgtagcaacg aataccttca aaatatcccg tgccgtaatg
     1441 caatccatgg gacagcacat ggatcttagc atcctcccac ggcaccagcg caccatccat
     1501 ccagattttt tcggttttaa gcgacataac gattctctcg aaatcctgtc tccaacaaat
     1561 ttttcgccat tgtacgttcc acggcgagta tcatcaagcg cataaaaaag gcgcataaaa
     1621 aaggccaccc ggttgcccgc ggtggccttg gcgggtaaac gtaaagctac aacccctttt
     1681 tgagcaccgg cgcggctttg aaaccgacgg tacggctcgc cttgatgctg atcacgtcgc
     1741 cggtctgcgg attaacgccc ttgcgcgcct tgcgcgagcg cacggtgaac gtgccaaaac
     1801 cgggaacttg aaatcgttta tgcttgcgga tcgccttggc gatcccttcg aaggtcgcat
     1861 cgacggcctc ccccgctgcg agtttggtaa tgttagcgct cttggccacc gcgtcgacta
     1921 actctccttt ggtcattgcc tttcatcctc cctctgataa gcccgtgaat atcccaccac
     1981 acggcagccc cgcggcctca gaacagtggc agatatttcc caattcgcgg ggaaatgtca
     2041 acaatattta cagtgttttt gccgcttcgt gtagcagacc gtagcgcacg ccttgatcac
     2101 tgaccactac ctggctggcg ccgaaacttt ccatgatttt ctcgatcaga taagcaccgg
     2161 caaaaatcac gtcggcgcgc ttcggctcca agccgacgat ctgctggcgt tgggtgatgg
     2221 acttttcttg cagcagagcg acctggcgct gcacttcggc caaggtcagc acgctgccat
     2281 gcacctggct gtgggagtag cgcgcgagtc tcttctcgat ggcggccagc gtcgtgaaag
     2341 ttcccgcgat accgactagc gcgagactag aagcttggga agaaaatgcc gccgcgatgg
     2401 gcgccagcgc gacatccacg gcggcagcca tggcggcgaa ttccgctggg tgcaccggat
     2461 cagcatgcaa ataatgctcg gtcaagcgca ccgaaccgac atcgatgctt gcggcgcgcg
     2521 tcacgccgtc ctcgttgcca cgaataaact ccgtgctgcc gccgccgata tcgattacca
     2581 ggagttcttg gccgagaagc gacaaaccgc gctgcaccgc aagaaaagaa tatgccgctt
     2641 cttcggcgcc ggaaatcacg cggatgtcaa tgccaagtgc gctgcggatg cgctccctga
     2701 cttcatcgct attcttagca tcgcgcaacg cgctggtgcc cacggcagtg atcgcctcga
     2761 cgccgagatc gcgacaacgg tcgcggtatc ggccgaggat ctccagggcg cgcgcttcac
     2821 cggcggcgcc gatcatgccg gtctggtcga caccccgacc caagccggcg atttcggcca
     2881 aatcatccaa cacacgaaag cggccggtgt ctcggatatc ggcaatcagg caaagaatcg
     2941 tgttggtgcc gacgtcgatg aaggcaccgc gtcacggact catgggagcg ccgccgttgc
     3001 agcgtcaatt gggtcatgaa attccgccgc gccgttgacc aggccggtgt ggcccagcca
     3061 tgccgccaaa tcggcgaggg cgcgctggga atgcatttct ttcttggcct taccgcgtag
     3121 ccgcactgac aatgacggta acaggccaaa gttcacgttc atcggctgaa aacgcttgcg
     3181 ctccggatcg gtgatataac gcaacagcgc ccctagcgcc gtggttggcg gcggcaccaa
     3241 aggtggcagt gccgcgagca accgcgccgc gttgatcccg gcgagcatac ccattgccgc
     3301 cgattctatg taaccttcga ccccggtcat ttgtccggca aaaaacagcg actcgcgttg
     3361 gcgccattgc agcgtcggcg tcagatgctg cggcgcgttg ataaacgtgt tgcggtgcaa
     3421 actgccgagc cgaacgaatt cggcgttggc caggccggga atcatcgcca acacgcggcg
     3481 ctgctcggga taggtcatct tggtttgaaa accgacaaga ttataaagcg tccgctggcg
     3541 attctcctgg cgcagttgca ccactgcgta gggacgattg ccagtgcgcg gatcgatcaa
     3601 gccaaccgcg
//
LOCUS       DATIRS010000059         2315 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_496303, whole genome shotgun sequence.
ACCESSION   DATIRS010000059 DATIRS010000000
VERSION     DATIRS010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2315
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_496303"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..211
                     /locus_tag="VLM90_00675"
     CDS             <1..211
                     /locus_tag="VLM90_00675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11493.1"
                     /translation="PLPDRRDDPLGARSIAIAHSRSVIGDGNKRNNHAAMAANAPPAD
                     SSGGVVVRDLPRRRHGIAVAVLAQR"
     gene            156..1805
                     /locus_tag="VLM90_00680"
     CDS             156..1805
                     /locus_tag="VLM90_00680"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSQ11494.1"
                     /translation="MIFLVVAMGLPLLFLLSGSFNLSAPGKPAVYGIDNWRHAFTDSA
                     TLNALWMSFLLSVVRLIPAMILSVSFAWLIARTDMPGGKFIEAVCWIAYFVPDFPLVL
                     AWILLLDPNFGFLNSVAKSLPGVDGALFTPYGFWGIVWVHTSTGGIWFKVMLLVPVFR
                     RLGATLEEAARVAGANTATMLWRITLPVLAPMILAVSVLSFIRGLQSFNTELLLGTPA
                     GIYVYSTKIYDLLQREPRAYGEATALGSVFLLVLAVLLFFYWKYLSGGKNFAVVTGQG
                     YSTLRVKLGQWRYIAFAGCLFYVAVTMLLPLAFLVIGSFMRRYGFFNIASPFTLTHWH
                     NMLSDPIFLIALKNSLIIAGTTAIGGVLLYSALAYLLVSRRTITGPLLESLCWIPHVL
                     PGILLSLGVLWLFLATPLRFFLYGSVWGIAVALILADSPVTTQAFKAGLLQLGGDLEE
                     AARVSGASWRYTYRRVLLPLLAPIAAAVGLMNFGSALTSISTPVLLYSHQSRPLAILL
                     LEYSFTGELERAAALGLLITVIIGVMMLVGRKLGLQLAGSD"
     gene            1859..>2315
                     /locus_tag="VLM90_00685"
     CDS             1859..>2315
                     /locus_tag="VLM90_00685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11495.1"
                     /translation="MFAIVGLTNAWAQAKAGEKEWAAVIEAAKKEGKVVVAGSPDPVM
                     RNDIIPKFTARFGIAVEFVAGRSSQIVSRVETERASGIFSIDIFLAGPDTSANELYND
                     KMIDPLKSLLVMPEVADGSKWKTGKVWLVDPQEQFIVRAFSSVATLLFIN"
BASE COUNT          374 a          646 c          718 g          577 t
ORIGIN      
        1 accgctaccc gatcggcgcg acgatccgct tggcgctcga tccatcgcaa ttgcacattc
       61 gcgcagcgtg attggcgatg gcaataaacg caacaaccat gccgcgatgg cggcgaatgc
      121 acctccggcc gattcgtctg gcggagttgt cgttcgtgat cttcctcgtc gtcgccatgg
      181 gattgccgtt gctgttcttg ctcagcggta gtttcaacct gagcgcgccc ggaaaaccgg
      241 cggtttacgg catcgacaat tggcgtcatg cctttaccga cagcgctacg ttaaacgcct
      301 tgtggatgag ttttctgctc tcagtcgtgc ggctgattcc ggcgatgatc ttgtcggtgt
      361 cattcgcgtg gctgatcgcg cgcaccgaca tgcccggcgg caaatttatc gaggcggtct
      421 gctggatcgc gtacttcgtg ccggatttcc ccttggtgct cgcgtggata ttgctgctcg
      481 atcccaactt cggctttctc aatagcgtgg caaaaagttt accgggggtc gacggcgcgc
      541 tgttcactcc ctacggtttt tggggcatcg tctgggtgca cacctccacg ggcggcattt
      601 ggttcaaggt aatgttgctg gtgccggtgt ttcgccgctt gggcgcgact ctcgaagagg
      661 cggcgcgggt ggctggcgcc aataccgcga ccatgctctg gcgtattacc ctgccggttt
      721 tggcgccgat gatcttggcg gtctcggtgc tgagcttcat tcgcggcttg caatccttca
      781 acaccgagct gctgctcggc acgccggcgg gaatctacgt ctactcgacc aagatttatg
      841 acctgcttca gcgcgagccg cgcgcttacg gcgaggcgac ggcgttgggc tcggtgtttc
      901 tattggtcct cgcggtgctg ctgttttttt attggaagta cttgagcggc ggcaagaatt
      961 ttgccgtggt caccggccag ggttattcca cattacgcgt gaagttgggc cagtggcgtt
     1021 acattgcttt cgccggctgc ctgttctacg tcgccgtgac gatgcttttg ccgctggcgt
     1081 ttctggtcat cggctcgttc atgcgccgtt acggcttttt caacatcgcg tcgccgttca
     1141 cgttgaccca ctggcacaac atgctcagtg atccgatctt tttgatcgcg ctaaaaaata
     1201 gtttgatcat cgccggcacg acggccatcg gcggcgtctt gctctattcc gccctggctt
     1261 atttgctagt ctcgcggcgc accattaccg ggccactgtt ggaaagtctt tgttggatac
     1321 ctcatgtgct gccggggatt cttttaagcc tcggcgtgct ctggctgttc ctggcgactc
     1381 cgctgcggtt ttttctttac ggcagcgttt ggggtatcgc cgtggcgctg attctcgctg
     1441 acagtccggt gaccacccag gccttcaaag ccgggctgct gcaattgggc ggcgatttgg
     1501 aagaggcggc gcgggtgagc ggcgcgtcct ggcgctacac gtaccggcgc gtgctcctgc
     1561 cgctgttggc gccgatcgcg gcggcggtgg ggctgatgaa tttcggcagc gccttgacca
     1621 gcatcagtac ccctgtgcta ctttacagcc accagtcgcg cccgctggcg atcttgttgc
     1681 tcgaatatag cttcaccggc gagctggaac gggcggcggc gctggggttg ctgattaccg
     1741 tgatcatcgg cgtcatgatg ctggtggggc gaaagttggg tttgcagttg gcggggagcg
     1801 actaatgcga tttcaaatcg ggagagatgc gatgtggcga gcgttgttac tcatgttcat
     1861 gtttgcgatt gttggactta caaacgcttg ggcacaggct aaggccggcg aaaaggaatg
     1921 ggccgccgtg atcgaggcgg cgaagaagga aggcaaagtc gtggttgccg gctcgcccga
     1981 tccggtgatg cgcaatgaca tcatacctaa attcaccgcg cgcttcggta ttgccgttga
     2041 gtttgtcgcc ggccggtcga gccagatcgt ctcccgcgtc gagaccgagc gggcttcggg
     2101 gattttcagc atcgatattt ttctcgccgg cccggacacc tcggcgaacg agctctacaa
     2161 cgataaaatg atcgacccgc tcaagtcgtt gctggtcatg ccggaagtgg ccgacggttc
     2221 gaaatggaag accggtaaag tctggttagt cgatccgcag gagcagttta tcgtccgcgc
     2281 gttcagcagc gtcgcgacgc tgctgttcat caaca
//
LOCUS       DATIRS010000060         7476 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_594816, whole genome shotgun sequence.
ACCESSION   DATIRS010000060 DATIRS010000000
VERSION     DATIRS010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 7476)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7476)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7476
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_594816"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..516
                     /locus_tag="VLM90_00690"
     CDS             <1..516
                     /locus_tag="VLM90_00690"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HSQ11496.1"
                     /translation="EVPLSTKDGKPRKGHKSTPKDIEWMKQMVKLPVVVKGIMGAADA
                     KIAVDSGADAVVVSNHGGRILDFNRSALEALPEVVDAVGAKVPVLLDSGIRSGGDIVK
                     ALALGAKAVLIGRPVAWGVGAFGARGVERVFNVLAEEMQRVLVMTGVARVRDVTQEIL
                     IRDDWGKGRLT"
     gene            513..1070
                     /locus_tag="VLM90_00695"
     CDS             513..1070
                     /locus_tag="VLM90_00695"
                     /inference="COORDINATES: protein motif:HMM:NF015944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HSQ11497.1"
                     /translation="MIFVIWGIVFVAGIWIISTYNTLTALRLRVQNGWHQINVQLKRR
                     YDLIPNLVETVKGYMQFEQDTLQKVIDARTKAMVSTGVKQTAEAQGALSESLGKVFVL
                     MENYPDLKSNQNVLDLQEELATTENQIAFSRQYYNDLVTQYNTKQQVFPGNLIAGFFK
                     FQPSELFSVPEGEMALPKVNLSLPR"
     gene            1088..2044
                     /locus_tag="VLM90_00700"
     CDS             1088..2044
                     /locus_tag="VLM90_00700"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HSQ11498.1"
                     /translation="MIDFAQRQAHNQRWSALLAGGFIVFFLIIGSAVDFLYFDGFTPA
                     GSPLPIATVLALGFATFTTVTAYYGGSRLILGSLGAEKLDIQIAEHRELRNIVTEMAL
                     ASGGAMPQVYVMDDAAPNALATGTNEKNAAICVTTGLLTLLDREETQGVVAHEMSHIR
                     NEDILLMTLVSVLVGGIAILADWGQRGAFRARSNRRDGAKNPALFIPLLLLVAVSPLL
                     AQLLAMAVSRQREYLADATAAEYTRNPRGLARALEKIRAAGAPVNKATRGTAPLFFCD
                     PLRRRLDDSESGLANLLTTHPPIARRIALLYEMAGMAQASIR"
     gene            2175..3353
                     /gene="cdaA"
                     /locus_tag="VLM90_00705"
     CDS             2175..3353
                     /gene="cdaA"
                     /locus_tag="VLM90_00705"
                     /EC_number="2.7.7.85"
                     /inference="COORDINATES: protein motif:HMM:TIGR00159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004016 - adenylate cyclase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diadenylate cyclase CdaA"
                     /protein_id="HSQ11499.1"
                     /translation="MPFATITIGEIVDVLLVAILVYTAIVWLRRTRAAFVVRGILILG
                     AAYMLVRYLDLQMTAWIFQAFFAVFVVMIVVIFQEELRQMFERIAVWSFSRQSVPTAT
                     SASADVVVRTLADLARDHIGALVVIAGKDPIDRHITGGIALNGRLSVPLLRSIFDTHS
                     PGHDGAVVIEHDRLTRFAVHLPLSKDLAQTAHAGTRHSAALGLAELCDALCLVVSEER
                     GTISIARNGRLRQLEGSQELGASIQKFLHEMFPVKANGSLRLGLLRENWLTKAVSICL
                     AIALWYLFVPGSKVVEMNYKVPVTVENLPANLQIEAIDPPVVSATFSAPLRTFYLFDR
                     KQIRISADVAMAELGRRTFTISDKDLRFPKELTLQEFSPTSVRISVKKAPQANPPNRG
                     "
     gene            3381..5426
                     /locus_tag="VLM90_00710"
     CDS             3381..5426
                     /locus_tag="VLM90_00710"
                     /inference="COORDINATES: protein motif:HMM:NF023324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-1,4-glucan--maltose-1-phosphate
                     maltosyltransferase"
                     /protein_id="HSQ11500.1"
                     /translation="MNKRKRKNNTGAIRLPRTAAPIVTEGRERVVIDAVRPIADGGRF
                     AIKRIEGERVVVEADIFADGHDELSAALLYRHGERGEWIEVPMQPSANDIWRAQFQVA
                     GLGDYYYTVRAWIDRFKSWRHGFEKKLAVGQDVDVELLAGAELVTHGAKRANGSHRKT
                     LERFAKALRAKSMKASELALTDELATLMAQYPDRRWAVTYSKALRVAVERRRAQFSAW
                     YEMFPRSCAPTPGVHGTFKDCIARLPYVASMGFDVLYLPPIHPIGKSFRKGKNNAMSA
                     APDDVGSPWAIGAKEGGHKSIHPQLGTLADFHQLVAKAKEQGLEIALDIAFQCTPDHP
                     YVKEHPEWFRKRPDGSIQYAENPPKKYQDIYPIDFESEDWQELWRELKSIVIYWCEQG
                     VRIFRVDNPHTKALPFWEWAIAEVRKEYPDAIFLAEAFTRPKVMYRLAKLGFSQSYSY
                     FAWRNTSAELTEYFTELSQTAVAEYFRANLWPTTPDILTEYLQFGGRPAFMARLVLAA
                     MLGANYGIYGPAFELCENVAREAGSEEFLNSEKYQLKHWDLAKPDSLKEIVALVNRIR
                     RDNPALHGDRSLRFHPVDNSELICFSKQSEDLTNAIVVVVNLDPHHSQSGWVELDAEL
                     LGLEAKKPYQMHELLTGARYLWHGARNFLQLDPLSMPAQIFRVRHKLRREQDFDYFL"
     gene            5447..>7476
                     /gene="treS"
                     /locus_tag="VLM90_00715"
     CDS             5447..>7476
                     /gene="treS"
                     /locus_tag="VLM90_00715"
                     /EC_number="5.4.99.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR02456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047471 - maltose
                     alpha-D-glucosyltransferase activity [Evidence IEA];
                     GO_process: GO:0005991 - trehalose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maltose alpha-D-glucosyltransferase"
                     /protein_id="HSQ11501.1"
                     /translation="MSRQPRNRESASLEENPYWYKDAVIYEIHVRAFCDGNGDGIGDF
                     VGLTEKLDYLQDLGVTALWLLPFYPSPLRDDGYDIADYTRIHADYGTLQDFRTFLREA
                     HRRGLRVITELVVNHTSDQHPWFQRAREAKPGSAARDYYVWHDNQERYQEARIIFKDF
                     ESSNWSWDPVAKAYFWHRFYAHQPDLNFDNPEVKKALFAALDFWLDMGVDGLRLDAVP
                     YLYERDSTNCENLPETHAFLKELRRHVDKQYNNRMLLAEANQWPEDAVAYFGAGDECH
                     MAFHFPVMPRLFMALHMEDRFPIIDILEQTPAIPESSQWAMFLRNHDELTLEMVTDED
                     RDYMYKVYANDPRARINLGIRRRLAPLLGNNRRRMELLNSLLFSLTGTPVIYYGDEIG
                     MGDNIYLGDRNGVRTPMQWSADRNAGFSRANPQKLFLPVIIDPEHHYETVNVEAHQQN
                     PSSLLWWMKRLILLRKSYRAFGEGSIDFLLPENRKALVFIRRYKDEIILVAANLSRFV
                     NCAELDLSAYKGMVPVELFGNTRFPPIGELPYFLTFGPHAFYWFKLLPPQLSQARSVI
                     DGFEPAKLTVAGAWEHILEGKPRVVFERTLPAYFMSCRWFGGKGQQIRSVKNIDVIPF
                     DADGVNAYITTWEVQFLGATPESYLLPLAFSTGERAFELRQANPQAVVAQLTV"
BASE COUNT         1549 a         2177 c         2182 g         1568 t
ORIGIN      
        1 gaggtgccgt tgtcgaccaa ggacggcaaa ccgcgcaagg gccataagtc gacgcccaaa
       61 gacatcgagt ggatgaagca gatggtaaaa ctaccggtgg tggtcaaagg catcatgggc
      121 gcggctgacg ccaagattgc agtcgactcc ggcgccgatg ccgtggtggt ttccaatcat
      181 ggcgggcgga ttctcgattt caaccgctcg gctttggaag cgttgcccga agtcgtcgat
      241 gcggtcggcg ctaaagttcc ggtgctgctc gacagcggca ttcgcagcgg cggcgatatc
      301 gtcaaagcct tggcgctggg cgccaaggcg gtgctcatcg gccggccggt ggcttggggc
      361 gtcggcgcct ttggcgcgcg cggcgtcgag cgggtgttca atgttctcgc cgaagagatg
      421 cagcgcgtgc tggtgatgac cggcgtcgcg cgggtgcgcg acgtgaccca ggaaattctc
      481 atacgcgacg actggggaaa gggacgctta acatgatctt cgtcatttgg ggtatcgttt
      541 ttgtcgccgg tatctggatc atctcgacct ataacacgct gaccgcgctg cgcttgcggg
      601 tgcaaaacgg ctggcaccag atcaacgtcc agctcaagcg gcgctacgat ttgattccca
      661 atttggtcga aaccgtcaaa ggctacatgc agttcgaaca ggacaccctg caaaaggtca
      721 tcgacgcgcg caccaaggcg atggtatcga cgggcgtcaa gcagacggcc gaggcgcagg
      781 gcgcattgag cgaatccctc ggcaaagtct tcgtgctgat ggagaactat cccgacttga
      841 aatccaacca aaatgtactc gacctgcagg aagagctggc gacgacggaa aatcagattg
      901 ccttttcacg ccagtactac aacgatctgg tcactcaata taacaccaag cagcaagtgt
      961 tccccggcaa tctgatcgcc ggtttcttca aattccagcc cagcgaattg ttctccgtgc
     1021 ccgaaggcga aatggcgctg ccgaaagtca atttgtcctt gcctcgctaa gctcgccgcg
     1081 cacaccgttg atcgatttcg cccaacgcca ggcccataat cagcgctgga gtgccttgct
     1141 ggcgggtggc ttcatcgttt tctttctcat catcggcagc gccgtcgact ttttatattt
     1201 cgatggcttc acaccagcag gatcgccgtt gcccattgcc acggtgttgg cgctggggtt
     1261 tgccaccttc acgaccgtca ccgcgtacta tggcggcagc cgtttgatcc tcggctccct
     1321 gggcgcggaa aaattagaca ttcaaatcgc cgagcaccgc gaattgcgca acatcgtcac
     1381 cgagatggcg ttggcgtccg gaggcgcaat gccgcaggtc tacgttatgg atgacgccgc
     1441 ccctaacgcg ttggccaccg gtaccaatga aaaaaacgcc gccatctgcg tcaccacagg
     1501 cctgctgacc ttgctcgacc gcgaagagac ccaaggcgtg gtcgcccatg agatgtcgca
     1561 tattcgcaac gaagatattc tgctgatgac cttggtcagc gtcctggtcg gcggcatcgc
     1621 gatcttggcg gattggggac agcgcggcgc ttttcgcgcg cgctcaaacc gccgcgacgg
     1681 cgctaagaat cccgcgctat ttattccgct gttgttgctg gtcgcggtgt cgccgttgct
     1741 cgcccagctg ttggcgatgg cggtgtcgcg ccaaagagaa tacctcgccg acgcgacggc
     1801 ggccgagtac acccgcaatc cgcgcggttt ggcgcgggcg ctggaaaaga ttcgcgctgc
     1861 cggcgcgccg gtaaacaaag ccacgcgcgg caccgcgccg ctgttttttt gcgatccgct
     1921 gcgccgccgg ttagacgaca gcgagagcgg cctggctaac ttgctaacga cccacccacc
     1981 gattgcccgg cgcatcgcgc tgctgtacga gatggcgggg atggctcaag caagcattcg
     2041 ctagaagcac cgccacccgg taagtcgctg gcaaaatcgc gcaacgttag gaaaaatcct
     2101 gtgattaccc tgagacaggc taaaagtacc agcttgaatc aggtatccta gcaacaatga
     2161 acagcgatac gcttatgcca ttcgcgacca tcaccatcgg cgagatcgtc gatgtcttgc
     2221 tggttgcgat tctggtctac accgcgatcg tatggttgcg ccgcaccaga gccgcgttcg
     2281 tggtgcgcgg gatcctgatt ctcggtgccg cctacatgct ggtgcgctat ctggacttgc
     2341 agatgactgc gtggattttt caagcgttct tcgcggtttt tgtcgtgatg atcgtggtga
     2401 tcttccaaga ggagttgcgc cagatgttcg agcgcatcgc ggtgtggagt tttagccgcc
     2461 agtcggtgcc gacggcgact tcggccagcg ccgatgtcgt ggttcgcacg ttggccgact
     2521 tggcgcgcga tcatatcggt gccctggtgg tgatcgcggg gaaggatcca atcgatcggc
     2581 atatcacggg cgggattgcg ctcaacggtc gattgagcgt gccgctcttg cgcagcattt
     2641 tcgacaccca ttcacccggc catgacggcg cggtagtgat tgagcacgat cggctgacgc
     2701 ggttcgcggt ccatctgccg ctgtcgaagg atctagcgca aacggctcat gcgggcaccc
     2761 gccatagcgc ggcgttggga ctggcggagc tttgcgacgc gctctgttta gtcgtctcag
     2821 aagaacgcgg cacgatttcc atcgcccgca acggccggct ccggcagctc gagggctccc
     2881 aggagctcgg tgcgtcgatt caaaaattct tgcatgagat gtttccagtc aaggcgaacg
     2941 gctcgctgcg cttgggactg ttgcgcgaaa attggcttac caaagccgta tcgatctgtc
     3001 tggcgatcgc gctttggtat ctgttcgtgc cgggatcgaa ggtcgtcgag atgaattaca
     3061 aggtgcctgt cacggtcgag aacctgccgg caaacctgca aatcgaagcg atcgatccgc
     3121 cggtggttag cgccactttc agcgcgccgc tgcgcacttt ttaccttttc gatcggaagc
     3181 agattcgcat cagcgccgat gtcgctatgg cggagttggg ccggcgcacg tttaccattt
     3241 ccgataaaga cctgcgcttt cccaaggagc tgaccttgca agaattcagc cccacttcgg
     3301 tgcggatttc ggtcaagaaa gcgccgcaag cgaacccgcc caatcgtgga tgaggtgaaa
     3361 agaaacaatc ggatggcgag atgaacaaga ggaaacgaaa aaacaacacc ggcgctattc
     3421 gtctgccgcg aacggccgcg ccgatagtca ccgaggggcg cgagcgggtg gtcattgacg
     3481 ccgtcaggcc gattgccgac ggtggccgtt tcgcgatcaa gcgcatcgaa ggcgagcgag
     3541 tcgttgtcga agcagatatc ttcgccgatg gccacgatga attatcggcg gcgctcttgt
     3601 accgccacgg cgagcgcggc gagtggatcg aagtgccgat gcagccttcg gccaacgata
     3661 tctggcgcgc ccaattccaa gtcgccggac tgggcgatta ctattatacg gtccgagcct
     3721 ggatcgatcg cttcaaatca tggcgccatg gtttcgagaa aaaactcgca gtcggacagg
     3781 atgtcgacgt cgagctgctc gccggagccg aactcgtgac acacggtgct aagcgtgcga
     3841 acggcagcca tcgcaaaacg ctagaacgct tcgctaaggc gttacgggca aaatccatga
     3901 aagcatctga gctcgcgttg acggacgaac tggccacatt gatggcgcag taccccgacc
     3961 ggcgttgggc ggtgacctat agcaaagcac tgcgcgtcgc cgtggagcgc agacgggctc
     4021 agtttagcgc ctggtacgaa atgttcccgc gctcgtgcgc accgactccc ggcgtccatg
     4081 ggacgttcaa agattgcatc gcccggctgc cctacgtcgc gtccatggga ttcgacgttc
     4141 tctatttgcc gccgatccat ccgatcggca agtcgtttcg caaaggtaaa aacaatgcca
     4201 tgagcgccgc gcccgacgat gtcggcagtc cctgggcgat cggcgccaag gagggcggtc
     4261 ataaatcgat tcatccgcaa ctcgggacgc tggcggattt tcaccagttg gtcgccaagg
     4321 ccaaggagca gggtctggaa atcgctctcg acatcgcatt tcagtgcacg ccggatcatc
     4381 cttatgtgaa agagcatccc gaatggtttc gtaaacgtcc tgacggttcg atccaatacg
     4441 ccgagaatcc gccgaagaaa taccaagaca tctaccccat cgatttcgag agcgaggatt
     4501 ggcaagagct ttggcgcgag ctgaaaagta ttgtgatcta ttggtgcgag cagggcgtgc
     4561 ggatctttcg ggtcgataat ccccacacca aggctctgcc cttctgggag tgggccatcg
     4621 ccgaagttag aaaagaatac cccgacgcaa tctttctcgc cgaagctttc acgcgcccga
     4681 aagtcatgta ccgtctggcc aagctcggct ttagccagtc gtacagttat tttgcctggc
     4741 gtaacacgag cgccgagcta accgagtatt tcaccgagct tagccagacc gcagtcgccg
     4801 aatacttccg cgcgaacctg tggccgacga cgccggacat cctgaccgag tatctgcaat
     4861 ttggcgggcg tcccgcgttc atggcgcgct tggtgctggc ggcgatgctc ggggcaaact
     4921 acgggatcta cggtcccgcc ttcgagcttt gcgaaaatgt cgcgcgggag gccggcagcg
     4981 aggaatttct caactcggaa aaataccagc tcaaacattg ggatctggcg aaaccggaca
     5041 gcttgaaaga gatcgttgcc ctcgtaaacc ggattcgacg cgacaatccg gcgctgcacg
     5101 gcgaccgcag cctgagattt cacccagtcg ataattccga gctgatttgc ttcagtaaac
     5161 agtccgaaga tctgactaac gccatcgtcg tcgttgtcaa tctcgacccc catcatagtc
     5221 aatccggctg ggttgaactt gacgccgagc tgctcgggct cgaagcgaag aagccctatc
     5281 aaatgcatga actgttaacc ggcgcccgct atctctggca tggcgcgcga aactttctcc
     5341 aactcgaccc gctgagcatg ccggcgcaga ttttccgggt gcgccataaa ctgcgccgcg
     5401 agcaggactt cgattatttc ctgtaaaacg aaatggaccc atgcctatga gccgtcaacc
     5461 acgaaaccgc gaaagcgcct ccctggaaga gaatccgtat tggtataaag acgcggtgat
     5521 ctatgaaatc cacgtgcgcg ctttttgcga cggcaatggc gacggcatag gcgattttgt
     5581 cggcctcacg gaaaagctcg attatttgca ggatctgggc gtcacggcgc tgtggctttt
     5641 gcctttttat ccctcgccgc tgcgtgacga tggctacgat atcgccgact acactcgcat
     5701 ccatgccgac tatggcacac tgcaagattt ccgaacgttt ttgcgcgaag cacaccggcg
     5761 cgggcttcgc gtgatcaccg aattggtcgt caaccatact tccgaccagc atccctggtt
     5821 tcagcgcgcc cgcgaggcca agccgggaag cgccgcgcgc gattattatg tttggcacga
     5881 caatcaggag cgctatcaag aggcgcggat tatttttaaa gactttgagt cgtccaattg
     5941 gtcctgggat ccagtcgcca aggcctattt ttggcaccgc ttctatgccc atcagccgga
     6001 tctgaacttt gacaatccgg aagtgaagaa agcgcttttc gccgccttgg atttttggct
     6061 cgacatgggc gtcgacggtc tgcgcctcga tgccgtgccc tatctttacg agcgcgacag
     6121 caccaactgc gaaaatctgc cggaaaccca tgccttttta aaagaattga gacgccatgt
     6181 cgacaagcaa tataacaacc gcatgctgct cgccgaggcg aatcaatggc cggaggacgc
     6241 cgtggcctat ttcggcgccg gcgacgagtg ccacatggcg tttcattttc cggtgatgcc
     6301 gcggctgttc atggcgttgc acatggagga ccgtttcccg atcatcgaca tcctcgagca
     6361 gactccggcg attccggaat cgagccagtg ggcgatgttt ctgcgcaatc atgacgagct
     6421 gacgctcgag atggtcaccg acgaagaccg cgactacatg tacaaagtct acgccaacga
     6481 tccgcgcgcg cgcatcaatc tcggcatccg ccgccgtttg gcgccgctct tgggcaacaa
     6541 ccgccggcgc atggagttgc tcaatagctt gctgttctcg ctcaccggca cgccggtgat
     6601 ttattacggc gacgagatcg gcatgggcga taatatttat ctcggcgacc gcaacggcgt
     6661 gcgcacgccc atgcaatgga gcgccgatcg caacgcgggt ttctcccggg ccaatccgca
     6721 aaagctgttt ttgccggtga tcatcgatcc cgagcatcat tatgaaacgg tcaacgtcga
     6781 agcgcaccag caaaatccca gctcgctgct ctggtggatg aagcgtttga tcctgctgcg
     6841 caaaagctac cgcgccttcg gcgaaggcag catcgatttt ctcttgccgg aaaatcgcaa
     6901 ggcgctggtg ttcatccgtc gctacaaaga tgaaatcatc ctggtggccg ccaatctttc
     6961 ccgcttcgtc aattgcgcgg agctcgattt gtcggcttac aaaggcatgg tgccggtgga
     7021 gttgttcggc aacacgcgct ttccaccgat cggcgagttg ccctattttc tcaccttcgg
     7081 cccgcatgcc ttctactggt tcaaattgtt gccgccgcag ctttcccaag cgcgctcggt
     7141 gatcgacggc ttcgagccgg caaaattgac ggtggccggc gcttgggagc acatccttga
     7201 gggcaagccg cgggtggttt tcgagcgcac cctgccggcg tatttcatga gttgccggtg
     7261 gttcggcggc aaggggcagc aaatccgttc ggtaaaaaat atcgacgtca ttccgttcga
     7321 tgccgacggc gtaaacgctt acatcacgac ctgggaagtc cagtttctcg gtgccacgcc
     7381 ggagagctac ttgctgcctc tcgccttttc gacgggagaa cgcgcgttcg agctgcgcca
     7441 ggccaacccg caagcagtgg tcgcgcaatt gaccgt
//
LOCUS       DATIRS010000061         2352 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1479776, whole genome shotgun sequence.
ACCESSION   DATIRS010000061 DATIRS010000000
VERSION     DATIRS010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2352
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1479776"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..367)
                     /locus_tag="VLM90_00720"
     CDS             complement(<1..367)
                     /locus_tag="VLM90_00720"
                     /inference="COORDINATES: protein motif:HMM:NF021486.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2203 domain-containing protein"
                     /protein_id="HSQ11502.1"
                     /translation="MDVNFPRLFTVNEANGLLPVLRPLVEQILDNIRRLKGVSEKVIR
                     REQLDPDAANLMERLREDGEVLKLVTQIKDWVMAINGHGCVCKGVEQGLIDFPCMLGS
                     EVVFLCWQIGEASVAHYHRI"
     gene            complement(427..1722)
                     /gene="lpxC"
                     /locus_tag="VLM90_00725"
     CDS             complement(427..1722)
                     /gene="lpxC"
                     /locus_tag="VLM90_00725"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: protein motif:HMM:TIGR00325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HSQ11503.1"
                     /translation="MEELAVNKTILVVDDEDDVRESVREVLRDEGYRVIDTGDGTQVL
                     ELIRQERPELVLLDIWMPQVDGIGLLKEIRSQEPDLNVVMISGHGNIHTAVTATKFGA
                     FDFLEKPVSLDGLLLTVQRALGESSNTLGRQSRAKKKSAAAKAGDAPSVGVASSNVKQ
                     RTLKKSVVLSGQGLHSGVKTGLILHPLPPNSGIRFTGISGEITVPAHLDYVGSTGYAT
                     SLRTQGFAVGTVEHLLAVLHSYGIGNLLIKVQGEVPILDGSSLEFCQALDEAGIQQED
                     EETAEIVIDRTYRVEAKGGESIAIEPADSFSVHYDLRYPNPVGEQQYTYRHRGAASFR
                     EEIAPARTFGFLKDIAKLQTMGLANGGRLSNFILIDDEKIVNTELRFADEFARHKILD
                     ILGDFYLLGRPIRGAIHARMTGHSDNIALLRKIREGMKL"
     gene            complement(1735..>2352)
                     /locus_tag="VLM90_00730"
     CDS             complement(1735..>2352)
                     /locus_tag="VLM90_00730"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSQ11504.1"
                     /translation="SAERLRKRYASMLGGDGGILDKCTTTIIQQVEELKSLVNEFSQF
                     ARLPSAKLVTQDLNEIVSESLFLFNEGHKGIQFHFSSGVIPALDLDRDQIKRVLINLL
                     DNAVAAVQDDGEIKLSTVYNRGRGVVTLEVADNGSGLAPETRTKIFEPYFSTKENGTG
                     LGLTIVSQIIEDHRGYIRALPNEPRGTRFSIEFPASEVAKRAVHS"
BASE COUNT          476 a          707 c          649 g          520 t
ORIGIN      
        1 cgattcgatg atagtgcgcc acgctggctt cgccgatctg ccagcacaga aacaccactt
       61 ccgaaccgag catgcaggga aagtcaatca atccctgctc gacgcctttg cacacgcagc
      121 catggccatt aatcgccatc acccaatcct tgatctgggt gacgagtttc aagacctcgc
      181 catcctcgcg caaacgttcc atcaaattgg ccgcgtcggg atcgagctgc tcgcgccgga
      241 tcactttttc gctgacgccc ttcaagcgcc ggatattatc taggatctgc tccaccagcg
      301 gccgcagcac cggcaagagt ccgttggctt cgttgacggt gaagagtcgg gggaaattga
      361 catccatgtt tggcttcttt caaattctct tcggtctcgg agggttcagc aaccccgcgc
      421 cggcgcttac agcttcatgc cttcgcggat cttgcgcagc agcgcgatgt tgtccgagtg
      481 gccggtcatg cgcgcgtgaa tcgcgccgcg aatcggccgg ccgagcaaat agaaatcgcc
      541 gagaatgtcg agaattttgt ggcgcgcaaa ttcgtcggcg aagcgcagct cggtgttgac
      601 gatcttttcg tcgtcgatca ggataaaatt gctcaaacgt ccgccgttgg ccagacccat
      661 ggtttgcagc ttggcgatgt ctttgagaaa gccgaaggtc cgcgccggtg cgatctcctc
      721 gcgaaacgat gcggcgccgc gatgacgata ggtgtactgc tgctcgccga ccggattggg
      781 atagcgcaga tcgtaatgca ccgagaagct atccgccggt tcgatggcga tggactcgcc
      841 gcccttggct tcaacccggt aagtgcggtc gatgacgatc tcagcggttt cttcgtcttc
      901 ctgctgaatg ccggcttcgt cgagggcctg gcaaaactcc agcgacgagc cgtcgaggat
      961 cggcacttcg ccctgcactt tgatgagcaa attgccgatc ccataactgt gcagtaccgc
     1021 gagcaagtgc tcgaccgtgc cgacggcgaa tccttgggta cgcaacgagg tcgcgtaacc
     1081 ggtggagccg acatagtcca aatgcgccgg cactgtgatt tcgccggaaa taccggtaaa
     1141 gcgaatgccg ctgttgggcg gcaatggatg caaaatcaag ccggtcttca cgcctgaatg
     1201 aagcccttgg ccggacagca cgacgctttt tttcaaggtc ctttgcttga cgttgctcga
     1261 tgccacgccg accgaaggcg catctccggc tttagctgcg gctgacttct tcttggctcg
     1321 gctttgccgt cccagggtat tcgacgactc gcccaaagcg cgctgcacgg tcaagagcag
     1381 gccgtctagg gaaaccggct tttcgagaaa atcgaaggcg ccgaacttcg tcgcggtcac
     1441 cgccgtatga atgttgccgt ggccggaaat catcacgaca ttgaggtccg gctcctgaga
     1501 cctgatttcc ttgagcaagc cgatgccgtc gacctgaggc atccagatgt cgagtagaac
     1561 tagttcgggc cgttcttggc gaattaattc caatacctga gtgccgtcgc cggtatcgat
     1621 gacgcggtag ccttcgtcgc gcagcacttc gcgaaccgac tcgcgcacat cgtcttcgtc
     1681 gtcgaccact aaaatcgttt tgttgaccgc cagctcttcc acacgccctc caagttacga
     1741 atgtaccgcc cgtttagcaa cctccgaagc agggaactca atgctaaagc gcgtccccct
     1801 gggttcgttg ggcaacgccc gaatatagcc gcgatgatcc tcgatgattt gactgacgat
     1861 ggtcaggccc aggccagtgc cgttctcctt ggtggaaaaa tacggttcga atattttcgt
     1921 gcgcgtctcc ggcgccaaac cgctgccgtt atcggccact tccaaggtca ccacgccccg
     1981 cccgcgattg taaacggtcg atagcttgat ctcgccgtca tcttgcaccg ccgccactgc
     2041 gttgtcgagc agattgatca gcactcgctt gatctggtcg cggtccagat ccaacgccgg
     2101 tatcaccccg gagctaaaat gaaattgaat acctttgtgc ccttcattga acagaaacag
     2161 cgactcgctg acgatctcat tgagatcctg ggtcactagc ttggccgacg gcagccgcgc
     2221 gaattgggaa aactcattga ccaggctttt gagctcttcg acctgctgaa tgatcgtcgt
     2281 cgtgcatttg tctaaaatgc cgccgtcgcc accgagcatg ctggcgtagc gcttgcgcag
     2341 ccgctcggcc ga
//
LOCUS       DATIRS010000062         2670 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_201579, whole genome shotgun sequence.
ACCESSION   DATIRS010000062 DATIRS010000000
VERSION     DATIRS010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2670
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201579"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(195..494)
                     /gene="fliE"
                     /locus_tag="VLM90_00735"
     CDS             complement(195..494)
                     /gene="fliE"
                     /locus_tag="VLM90_00735"
                     /inference="COORDINATES: protein motif:HMM:TIGR00205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HSQ11505.1"
                     /translation="MSIVKNVDLVYRPAPLANVKNLDEPAKGDFNNVLKSAMGEVGEL
                     QEKAKHSIQQMVGEGKGDLQETMIALEKADVSFKLMMQIRNKVLDAYQEIMRMQV"
     gene            complement(529..978)
                     /gene="flgC"
                     /locus_tag="VLM90_00740"
     CDS             complement(529..978)
                     /gene="flgC"
                     /locus_tag="VLM90_00740"
                     /inference="COORDINATES: protein motif:HMM:TIGR01395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009425 - bacterial-type flagellum basal
                     body [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HSQ11506.1"
                     /translation="MDLFKIFSISGSGMAAQKSRMTVVAGNLANSESTRTVDGGPYRR
                     RDVIFQAAPPPGEFTDELNDIAADRERAQGVEVVGVKQSNRPPRRIFDPSHPDASSEG
                     YVAMPDINPMEEMVDMLSAVRSYEANLSAFNTTKSLIRKILDMGRYQ"
     gene            complement(981..1409)
                     /gene="flgB"
                     /locus_tag="VLM90_00745"
     CDS             complement(981..1409)
                     /gene="flgB"
                     /locus_tag="VLM90_00745"
                     /inference="COORDINATES: protein motif:HMM:TIGR01396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009429 - bacterial-type flagellum basal
                     body, proximal rod [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HSQ11507.1"
                     /translation="MAGLRLFGTTHQLLELSLRGRAARHEVLSANIANADTPGYRPRD
                     LDFNAAMRSASESGALGSGEAPQRGDASATAGLDLASAIYESEYPDSRHGEDRLDGNA
                     VSLDRQMALITENSLAYETSLTFLSRALAGLRYAISEGRR"
     gene            complement(1411..>2670)
                     /locus_tag="VLM90_00750"
     CDS             complement(1411..>2670)
                     /locus_tag="VLM90_00750"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSQ11508.1"
                     /translation="LREGADLVISDVRMPGLSGLELLKRFHQLRFILISGFATVPQAV
                     DAMKLGAYDFLVKPFSHRELISLVETALEGKTADNPSGRAADEFVTANPRMRGLLEFA
                     RQIAKSQASILIQGESGTGKELLARYLHSHSRRHAGPFVAVNCAALPEGLLESELLGY
                     ERGAFTGAVTGKAGKFELAHDGTLLLDEISEMPLALQAKLLRVLQEREVDRLGGKKPL
                     PIDIRVISTTNRELREMIRAGSFREDLFYRINVVPTRIIPLRERLDDIAPLAASFFSK
                     RGYPGLSLAQSTLARLQDNPWRGNVRELFNVLERAAIMAEDGAILPEHLLLEDEPPSW
                     SRTAAPVAVLPEAWPVTDSALPRASLEYAGSRQRSVREMEEQLIFQTLKQANNNRTQA
                     AKLLGISVRTLRNKLKSYRERIQLVEA"
BASE COUNT          519 a          777 c          792 g          582 t
ORIGIN      
        1 caaagacaaa attcgaaacc cgaaattcga aatccgaaac aaacgcagtt aatttgaact
       61 caaactcgga acatccaaaa cgctgaattc gctccgacct gtttggagca ttagggtttt
      121 tggtcatttg aattcgtttc ggtccgcggg gccgctttcg gatttcgagt tttcatttgg
      181 ttttcggcat tgaatcacac ctgcatgcgc atgatctcct ggtaggcgtc gaggactttg
      241 ttacggattt gcatcatcag tttgaaggat acgtccgcct tctcgagagc gatcatggtt
      301 tcctgaagat cgcccttgcc ctcgccgacc atttgttgaa tcgaatgttt ggctttctcc
      361 tgcaactcgc cgacttcgcc catggcgctc ttgagcacat tgttgaagtc gcccttggcc
      421 ggctcatcga gattcttaac gttggcgagg ggcgccggac ggtagaccag atcgacgttt
      481 ttgacgatac tcatggcgat agtttctcct taagcaaaca attcgcgatt actggtatcg
      541 gcccatatcc aagatttttc gaatcaatga cttggtggtg ttgaatgccg ataaattagc
      601 ctcgtaggaa cgcactgccg agagcatgtc gaccatttct tccattgggt tgatatccgg
      661 catcgcgaca taaccctcgc tgctggcatc gggatggctg ggatcgaaga tccggcgcgg
      721 cggccggttg ctttgcttga cgccaaccac ctccacgccc tgggcgcgct ctcgatccgc
      781 cgcgatgtca ttgagttcgt cagtaaattc accggggggc ggcgccgcct gaaaaatcac
      841 gtcgcggcgg cggtaggggc caccgtcgac ggtgcgcgtc gattcgctat tggccaagtt
      901 gccggcgaca acggtcatgc ggctcttctg agccgccatg ccggagccgc tgatggagaa
      961 tattttaaac agatccatgg ttaccttcgt ccttcgctga tggcgtagcg cagccccgcc
     1021 agcgcccgcg acaagaaagt tagagaggtt tcgtaagcca gcgagttttc ggtgatcagc
     1081 gccatttgcc gatcgaggct gacggcgttg ccgtcgagcc ggtcttcgcc gtggcggcta
     1141 tcgggatact ccgactcgta aatcgccgac gctaggtcca gcccggcggt ggccgaagcg
     1201 tcgccgcgct ggggagcttc gccggagcct agggcgccgc tctccgaggc ggagcgcatc
     1261 gcggcgttga agtccaaatc gcgcggccgg taaccggggg tatcggcatt ggcgatgttg
     1321 gcactgagca cttcatggcg tgccgcgcgc ccgcgcaggg acaactcgag taactggtgc
     1381 gtcgtaccga aaagccttag tccggccatt tcatgcctcc accaattgga ttcgttcgcg
     1441 ataactcttc aatttgttac gcagcgtgcg cacgctgatg cccaataact tggccgcctg
     1501 cgtgcggttg ttgttggctt gcttgagggt ttgaaaaatc agttgttctt ccatctcgcg
     1561 caccgagcgt tgccggctgc cggcgtattc caggctcgcc cgtggcagcg cactgtcggt
     1621 aaccggccag gcttcaggca acactgccac gggagcggcg gtccggctcc acgacggcgg
     1681 ttcatcttcg aggagtaagt gctccggtaa gatcgcgcca tcttcggcca tgatcgcggc
     1741 ccgttcgagc acgttaaaca gctcgcgcac gttgccgcgc cagggattat cttgtaaccg
     1801 cgccaaagtc gactgcgcca aggacagccc cggatagccg cgctttgaga aaaatgacgc
     1861 tgccagcggt gcgatgtcgt cgagccgttc gcgcagcgga ataatccgcg tgggcacgac
     1921 gttgatgcgg taaaacaagt cctcgcgaaa actaccggcg cgaatcattt cgcggagctc
     1981 ccgattggtc gtggaaatca cccgaatatc gatcggcagc ggtttcttgc cacccaagcg
     2041 gtcgacctcc cgttcctgca ggacgcgcaa gagcttcgcc tgcagcgcga ggggcatttc
     2101 gctgatctcg tcgagcagca gggtgccgtc atgggcgagt tcgaattttc ccgctttacc
     2161 ggtgaccgcg ccggtaaaag cgccgcgctc gtaacctaac agctcggact ccaagagccc
     2221 ctcgggcaac gccgcgcaat tgaccgcgac gaaggggccg gcatggcgcc ggctatggct
     2281 gtgcagatag cgcgccaaca gttccttgcc cgtgccgctt tcaccttgga tcaggatcga
     2341 agcctgggac ttggctatct gacgggcaaa ttcgagcaag cctcgcattc gcgggttggc
     2401 ggtgacgaac tcgtcggcgg cgcggccgct cgggttatcg gcggttttgc cctccagggc
     2461 cgtttcgacc agggaaatca attcacggtg cgaaaacggc ttgacgagga aatcgtaagc
     2521 gcccagtttc atggcatcga cggcttgcgg cacggtggca aaaccgctga tgagaataaa
     2581 tcgcagctgg tggaagcgct tcaataactc gaggccgctc aaccccggca tgcgcacgtc
     2641 gctgatgacc agatcggcgc cctcgcggag
//
LOCUS       DATIRS010000063         2338 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1479830, whole genome shotgun sequence.
ACCESSION   DATIRS010000063 DATIRS010000000
VERSION     DATIRS010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2338
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1479830"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..488)
                     /locus_tag="VLM90_00755"
     CDS             complement(<1..488)
                     /locus_tag="VLM90_00755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11509.1"
                     /translation="MTPQEAFAVVDRCARDEEIDQLLVDLLRYPSPQTERLEDEPQIK
                     KFIADKVAPCFAELTGRAGAVDAMGNLIWRLGGASTGGLMLMAYAMTFPAASMKQPFS
                     GALVDGKAFEVAGQCALGRGACEQKGALAGMIYAATIVARDRAALRAPLILAVSLAGE
                     TGR"
     gene            complement(505..1677)
                     /locus_tag="VLM90_00760"
     CDS             complement(505..1677)
                     /locus_tag="VLM90_00760"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF012678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HSQ11510.1"
                     /translation="MAGSTFIFNNPRVERIVSGRGSIGKLAEEIDRVGGTRALVVISP
                     SVARTFLLERIKSGLGAKCAAVFDAVKPHSPTDSIEQAVERARDARIDVLVSAGGGSA
                     IDSAKGVAALLAEGGSLPRFGVRFTPPNTKEVPPMPAPKLPHIAIPTTLSGGEYSYSA
                     GISEGGKKYIVADPKLAPRTVLLDPEAAATAPGRLLAASGMNALAHCVEAVYSTETQP
                     LTEAYCLTGIGLIARYLPRAVENSRDLEALSYIQVAACLSGMGVYSAWTGIHHAIVHV
                     VGGRYKAPHAEIHALMLPYAMRWNLDVAIGAYTRMAREIGMEGADDIALAAAVPEHVF
                     AMNRRLGLPLKLRDLGVPRDGLKQLAIDALDDYSIHTNPKPVTAAGQVLEVLEQAW"
     gene            complement(1687..>2338)
                     /locus_tag="VLM90_00765"
     CDS             complement(1687..>2338)
                     /locus_tag="VLM90_00765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11511.1"
                     /translation="VPAQDNFVFGVAKTTGITSAEQWLAAKTAVKFGAIAAGDGTYDT
                     SKVVEVALGLPIQIVSGYKGTAPIRLAFNSGEVGGLSNSWQSFRSTWRKELETGEVMI
                     VLQLSAKPHPDLPKVPLAMNLAKTDESRKLIQAVAQAHGAAVRPYVLPPGTPKDRVDI
                     LRKAFMEAIKDPELLNEAGKANLEINPGSGEELERNVRELLRLEPSVVARLKEILK"
BASE COUNT          467 a          739 c          660 g          472 t
ORIGIN      
        1 cgaccggtct ccccggccaa gctcaccgcc aaaatcagcg gcgcgcgcaa ggctgctcgg
       61 tcgcgagcga cgatcgtggc tgcatagatc atcccggcca acgcgccttt ttgttcgcag
      121 gcaccgcgac cgagagcgca ctgccccgcc acttcgaatg ccttaccgtc caccagcgcg
      181 ccagagaacg gttgcttcat cgaagcggcc ggaaaggtca tggcgtaagc catgagcatc
      241 agtccgccgg tgctcgcgcc acccagccgc cagatcaaat tgcccatggc gtcgaccgca
      301 ccggcgcgtc cggtcaattc agcaaaacac ggcgcgactt tatcggcgat aaattttttg
      361 atctgaggct cgtcttccaa ccgttcggtc tgcggcgacg gataacgcag gagatcgacc
      421 agtagctggt cgatctcttc atcgcgcgcg caacgatcga cgaccgcgaa agcctcttga
      481 ggggtcatgg ttggcggcga gaaactacca agcttgctcc aacacttcga ggacttgccc
      541 ggcggcggtc acgggtttgg gattggtgtg gatgctgtaa tcatccaacg catcgatggc
      601 gagctgtttt aaaccatcgc gcggtacccc taagtcgcgc agctttaacg gcagacccaa
      661 ccttcggttc atggcaaaaa catgttcagg aacagccgcg gccaacgcga tgtcgtcggc
      721 gccttccatg ccgatctctc gtgccatacg cgtataggct ccaattgcga cgtcgaggtt
      781 ccagcgcatg gcgtacggca gcatcaaagc gtggatctct gcgtgcggcg ctttgtagcg
      841 gccgccgacc acgtgaacga tcgcgtgatg aatgccggtc catgcgctgt aaacccccat
      901 accggaaaga caggctgcca cttggatgta actcaacgct tcaagatccc gtgaattttc
      961 caccgcgcgc ggcaggtagc gcgcgatcag gccgataccc gtaagacaat aggcttcggt
     1021 aagcggctgc gtttcggtgg agtacacggc ttcgacgcaa tgcgccagcg cattcattcc
     1081 ggaggctgcg agcaatcttc ctggcgccgt tgccgcggct tcggggtcga ggagaaccgt
     1141 gcgcggagca agtttgggat cggcgacgat atactttttc ccgccttcgc tgatacccgc
     1201 cgaataactg tactccccgc ccgacaatgt cgttgggatc gcgatatgcg gcagcttcgg
     1261 cgcgggcatc ggcggaactt ccttcgtatt cggtggcgtg aagcgaacac cgaagcgcgg
     1321 caacgagccg ccttcggcaa gcaaggccgc gacccctttc gcgctatcga tggcgcttcc
     1381 cccgcccgcg ctcaccagca cgtcgatgcg cgcgtcgcgc gcgcgttcga ccgcttgctc
     1441 aatcgagtcc gtaggcgaat gcggtttgac cgcatcgaag accgccgcgc acttcgcgcc
     1501 gaggccggac ttgatccgct ccagcaagaa cgtccgggcg accgacggcg agatcacaac
     1561 caacgcgcgc gttccgccaa ccctgtcgat ttcttcggcc aattttccaa tcgacccgcg
     1621 gccggaaacg atgcgctcga ccctgggatt gttaaaaata aaagtagaac ccgccatctt
     1681 gcttgcctac tttagaattt ccttcagccg tgcgaccaca gagggctcga gacgaagaag
     1741 ctctctgacg tttcgctcga gctcttcgcc cgatcccgga ttgatttcca gattcgcctt
     1801 gccggcttca ttgagcagtt ccggatcctt gatagcctcc ataaaagcct tgcgcaggat
     1861 atccactcga tccttcggcg tgccgggagg caggacatag ggacgcacag cggcgccgtg
     1921 agcttgggcc acggcctgaa tgagtttgcg tgactcgtct gtcttagcca gattcatggc
     1981 caaaggcact ttgggcaggt ccgggtgggg cttcgcgcta agctgaagca caatcatcac
     2041 ttccccggtt tcaagttcct tcctccacgt tgaccgaaac gattgccatg agttactcag
     2101 accgccgact tcgccgctgt tgaatgccaa gcgaattggc gcggttcctt tatatcccga
     2161 tacaatctgg atcggcaggc caagagcaac ctcgacgacc ttggaggtat cgtaggtccc
     2221 gtcaccggct gctatggcgc caaatttcac cgctgtcttg gctgccaacc attgctcggc
     2281 gcttgtgatg cccgtcgtct tggccacgcc aaagacaaaa ttatcctgag ccggcaca
//
LOCUS       DATIRS010000064         4102 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1185190, whole genome shotgun sequence.
ACCESSION   DATIRS010000064 DATIRS010000000
VERSION     DATIRS010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4102
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1185190"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..316
                     /locus_tag="VLM90_00770"
     CDS             <1..316
                     /locus_tag="VLM90_00770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11512.1"
                     /translation="DWRKLSWVSLGVLRDTPGLKRTMRERFPRSQLLTGEQVLCADGK
                     LRYYQPLRVEMYRQMVSWIRRAAPTVKVYLCMESREVWEQVFGYAPSCEKELGNQMAP
                     DS"
     gene            327..1127
                     /gene="murI"
                     /locus_tag="VLM90_00775"
     CDS             327..1127
                     /gene="murI"
                     /locus_tag="VLM90_00775"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008881 - glutamate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HSQ11513.1"
                     /translation="MINQDSAIGVFDSGIGGLTVLHQIIEALPGENTVYLGDTARSPY
                     GTKSVETVMRYSFENSKFLVEKGVKLVVVACNTSTAIALSRLQESLSVPVIGVIEPGV
                     RRAIKSTKNRKVGVIGTEATIQSGAYTRALKAADPKIEVYSRACPLFVPLVEEGWTDN
                     AVVEMTVAAYLGSLKQSGIDTLVLGCTHYPLLKKAIRKFMGRGVRLVDSAEETASEVA
                     AALKKGASGRKAGKGIHSFFVTDAPERFVKVGRRFLGENVESAVRIER"
     gene            1246..>4102
                     /gene="secA"
                     /locus_tag="VLM90_00780"
     CDS             1246..>4102
                     /gene="secA"
                     /locus_tag="VLM90_00780"
                     /inference="COORDINATES: protein motif:HMM:TIGR00963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HSQ11514.1"
                     /translation="MWDFIKKIVGTKNDREIKRIRPYVDEINKLEPEYQRLSDDELKA
                     KTDQFKRRLDEATATLKSELEEAQNRASVAEPEEREELKTQAEELDKELRQKEAEILD
                     QLLPEAFAAVREASRRTIGLRHYDVQLIGGAVLHSGKIAEMKTGEGKTLVATLALYLN
                     ALTGRGAHLITVNDYLARRDVQWMGPIYHKLGLTAASIVHEVSYLFDPTYLTKDYRFL
                     NLRPIQRQEAYHADITYGTNNEFGFDYLRDNMKFSLEEYVQRELNFVVVDEVDNILID
                     EARTPLIISGPAEESTDKYYLIDRMIPKLQRGAVIQGDPTQEDRAAIEAKGDYTVDEK
                     SRSVTLTETGVAKVERLLGVHNLYDPRQIDTLHHVQQALKAHAIFKRDVDYVIKEGEV
                     IIVDEFTGRLMPGRRWSDGLHQAVEAKERVHIREENQTLATITIQNYFRMYKKLAGMT
                     GTADTEAPEFQKIYKLDVTVVPTHRNMVRQDNADVVYRTDNEKYDAVVSEIEERHRQG
                     QPVLVGTTSVAKSEKLSRLLKKKNIKHNVLNAVNHEAEASIIAQAGRFGALTIATNMA
                     GRGTDILLGGNPEFLARSDMENEWINRASKLPLQGAARYEDSLRELREKYEEEVQRAE
                     KKFLKDSELFDQQRSEALKRTTELQREIRIASPFGELREKYEDVSATQLIEALHSARP
                     IPESYLKAKEIFEGAVLAVTNGQAVPLPDEFVEARDEFQATLDRWQQRADERNALTDF
                     LDEKRRVYEQRLIDLEFDRAKAALTQGDLAGSVDEYEQAHRSFEEAEERCEELRLPYE
                     QAIQDAQQNYETKRQEYLRMVEDIREQLEKAPDEYRLRFDEMLAQYNTGCAAEKDKVI
                     AAGGLHILGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLEDDLMRIFGADRIQGIM
                     SRLGMEEGEPIEHGLVTRAIENAQKKVEAHNFDIRKHL"
BASE COUNT          968 a         1128 c         1239 g          767 t
ORIGIN      
        1 cgactggcgc aagctttcct gggtcagtct cggcgtcttg cgcgacacac ctgggttgaa
       61 gcgtactatg cgcgagcgct ttccacgcag ccagttgctc accggcgagc aggtgctctg
      121 tgccgacggc aagctgcgtt attatcagcc tctgcgggtc gaaatgtacc gccaaatggt
      181 tagctggatt cgccgcgccg cgccaacggt gaaagtttat ctatgcatgg aatcccgcga
      241 agtgtgggag caggtattcg gttatgcgcc gtcctgcgaa aaagagctag gcaaccagat
      301 ggcgccggac agctaaattg cgatcgatga taaaccaaga tagtgccatc ggggtgttcg
      361 actcgggcat cggtgggctt accgtactgc atcagatcat cgaggcgttg ccaggcgaga
      421 acacggtcta tttgggcgac acggcgcgct ccccctacgg taccaagtcg gtggaaaccg
      481 tcatgcgcta ttccttcgag aacagcaaat tcctggtcga aaagggcgtc aagctggtgg
      541 tcgtcgcctg caatacctcc acggccatcg cgctgagccg cttgcaagaa agtctgtcgg
      601 tgccggtcat cggcgtgatc gagcccgggg tgcgccgggc gatcaagagc accaagaaca
      661 gaaaggtcgg cgtcatcggt accgaagcga ccatccaaag tggcgcctac acccgtgccc
      721 tgaaggccgc cgacccgaag atcgaagtct acagtcgggc gtgtccgctg ttcgtgccgc
      781 tggtcgaaga aggctggacc gataatgcgg tggtcgagat gactgtcgca gcgtatctcg
      841 gcagtctcaa acagagtggc atcgacacgt tggtattagg ttgcacccac tatccattgc
      901 tcaaaaaggc gatccgcaag ttcatgggca ggggggtgcg tctggtcgac tccgccgaag
      961 agaccgccag cgaagtggcg gcggcgctca aaaagggcgc gagcgggcgc aaggcgggta
     1021 aagggattca cagttttttt gttaccgatg cgccggagcg cttcgttaaa gtcggccggc
     1081 gctttcttgg cgagaacgtc gagtccgcgg tacggatcga acgctaagct cccgcgcgct
     1141 cctaagaaca gctttaagtc gcctgtcaat tcgtgtattt taataccatc tttagcagct
     1201 aaacggctcc tccgtctcca gcgaattcgg gagtatattt ttaacatgtg ggatttcatc
     1261 aaaaagattg tcggcaccaa aaatgaccgc gagatcaagc gcatccgccc ctatgtcgat
     1321 gaaatcaata agctcgagcc ggaataccag cggctgagcg atgacgaact caaggcgaaa
     1381 actgatcagt tcaagcgtcg gcttgatgaa gccacggcga cgttgaagag cgagttggaa
     1441 gaagcccaga accgggcgag cgtcgccgag ccggaggagc gcgaggaact caagacccaa
     1501 gccgaggaac tcgacaagga actacgccag aaagaggccg agatactgga tcaactgttg
     1561 ccggaggctt tcgcggcggt gcgcgaagcc tcacgtcgga cgattggctt acgccattac
     1621 gatgttcagt tgatcggcgg cgcagtgctt cactccggca aaattgccga gatgaaaacc
     1681 ggcgagggca agactttggt tgctaccttg gcgctatatt tgaatgcgct taccggccgc
     1741 ggcgcgcact taatcactgt caatgactac ttggctcggc gcgacgtgca gtggatgggg
     1801 ccgatttacc acaagttagg actcaccgcg gcctccatcg tgcatgaagt cagttatcta
     1861 ttcgatccca cttatctgac caaggactat cgttttttga atctgcggcc gatccaacgc
     1921 caagaggctt accacgccga tatcacttac ggcaccaata acgagttcgg cttcgactat
     1981 ctgcgcgaca atatgaagtt ctccctggaa gagtatgtcc agcgcgagct caacttcgtc
     2041 gtcgtcgacg aggtcgataa tatattgatc gacgaagcgc gcacgccgtt gattatttcc
     2101 ggaccagcgg aggagtcgac cgacaagtac tatctcatcg accgaatgat tcccaagctg
     2161 caacggggcg cggtgatcca gggcgatccg acgcaggaag accgtgccgc catcgaggcc
     2221 aagggcgatt acaccgtcga cgaaaaaagc cgctcggtga ccttgaccga aaccggcgtg
     2281 gccaaagtcg agcggttgct gggcgtgcac aatctttacg acccgcgcca gatcgatacc
     2341 ttgcaccatg ttcagcaagc gcttaaagcc cacgcgattt tcaaacgcga tgtcgactac
     2401 gtcatcaaag aaggcgaagt gatcatcgtc gatgagttca ccggccgttt gatgccgggg
     2461 cggcgctggt ccgacggact gcaccaggcg gtggaagcca aggagcgcgt tcatattcgc
     2521 gaggaaaacc agaccctggc gaccatcaca attcagaact acttccgcat gtacaagaag
     2581 ctcgcgggca tgaccggtac cgccgatacc gaggcgcccg agtttcaaaa aatttacaag
     2641 ctcgatgtca ccgtagtgcc gacccaccgc aacatggtgc gccaggacaa tgccgatgtg
     2701 gtttatcgta ccgacaacga aaagtacgat gccgtggtgt cggagatcga agagcggcac
     2761 aggcaggggc agccggtgct ggtcgggaca acctcggtgg ccaagtcgga aaagctatcg
     2821 cgcctgctca aaaagaaaaa catcaagcac aacgttttga acgccgtcaa ccatgaagcc
     2881 gaagcgagca tcatcgctca ggccggacgc ttcggcgcgc tcaccatcgc caccaacatg
     2941 gccggtcgcg gcacggatat attgctcggt ggcaatcccg agtttctcgc gcgctcggac
     3001 atggaaaacg aatggatcaa ccgggcttcg aaattgccgc tgcagggcgc ggcgcgctat
     3061 gaggactcgc tgcgtgaatt gcgcgagaaa tacgaagagg aagtccagcg cgccgagaag
     3121 aaatttctca aagacagcga actgttcgat caacagcgca gcgaggcgtt gaaacgcacc
     3181 accgaattgc agcgtgagat ccgcatcgcg tcgcctttcg gcgagcttag agagaagtac
     3241 gaagatgtgt cagccaccca attgatcgaa gccttgcaca gcgcgcggcc gatcccggaa
     3301 agttacttga aggccaagga gatctttgaa ggggcggtgc tggcggtgac caacggccaa
     3361 gcggtgccgc tgccggacga atttgtcgag gctcgggacg agttccaggc caccctggac
     3421 cgctggcagc aaagggccga cgagcgcaac gcgttgactg actttctcga cgagaagcgg
     3481 cgtgtctatg aacagcggct gatcgatctg gaatttgacc gtgccaaagc ggcgctcact
     3541 cagggcgatt tggctgggtc ggtcgatgaa tatgagcagg cgcatcggtc gttcgaggag
     3601 gcggaggagc gttgcgagga gttgcggctg ccctacgaac aggcgatcca ggacgcgcaa
     3661 caaaactatg aaaccaagcg ccaggaatat ttgcgcatgg tcgaggacat tcgcgagcag
     3721 ctggaaaagg cgccggacga gtaccggctt cgttttgacg agatgctggc gcagtataat
     3781 acaggttgcg ccgcggaaaa ggacaaagtg atcgctgccg gcgggttgca tatcctcggc
     3841 accgagcgcc atgaaagccg gcgcatcgat aatcagctgc gcggccgcgc cgggcgccaa
     3901 ggcgatcccg gctcgtcgcg attttacctt tccctcgagg acgatctcat gcgcattttc
     3961 ggcgccgacc ggattcaagg catcatgagc cggttgggca tggaggaagg cgagccgatc
     4021 gagcatgggc tggtcacccg cgccatcgag aatgcgcaga agaaagtcga agcgcataac
     4081 ttcgatatcc gcaagcatct tc
//
LOCUS       DATIRS010000065         1821 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_398614, whole genome shotgun sequence.
ACCESSION   DATIRS010000065 DATIRS010000000
VERSION     DATIRS010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1821
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_398614"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..296
                     /locus_tag="VLM90_00785"
     CDS             <1..296
                     /locus_tag="VLM90_00785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11515.1"
                     /translation="LLVNTVELLCTAGIPAIYTRVLTEQALPGWAYYSYLALYNLAYM
                     ADDSLMLAIAVLTLSGHKLQERGGRWLKLLSGIVMLALGLVLLLRPEWLGKIG"
     gene            331..990
                     /locus_tag="VLM90_00790"
     CDS             331..990
                     /locus_tag="VLM90_00790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11516.1"
                     /translation="MRRRTTVIPLLLILGISGCGWIRQNRVVNSPGLGRIDNNIYTSP
                     RQSFRLRLPWLAPGARLRDEQPTADTLLVTIEDDLCREFVVSERPGSLGKESLQSWVD
                     GHIVEELKRLGFDVRSKPLTTRNGTVIELRYRAPAAAPCRQTKDADGKPVAAKLDADV
                     GWYVYHRDGVFYRLIYVVAIGPGAPRLWYINRDPVEAVLGQFAEGFEILEVNARQGPT
                     N"
     gene            1344..1664
                     /locus_tag="VLM90_00795"
     CDS             1344..1664
                     /locus_tag="VLM90_00795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11517.1"
                     /translation="MTGVIFLIAGVIIIGLYFVVAPAVLSSYRRYRGRRTIICPETDQ
                     IVEMELKAGRAGVMAALGKQDLRVKWCSLWPRRKGCAEECVKDDWPAAGEPRADDRSH
                     ANGV"
BASE COUNT          377 a          523 c          537 g          384 t
ORIGIN      
        1 cgttgctggt gaacaccgtg gagctgctct gcaccgccgg cattccggcg atctacacaa
       61 gagtgctgac cgagcaggct ctgcccggct gggcgtacta cagctacttg gccctataca
      121 atctcgccta catggctgac gatagtttga tgctggcgat cgccgtgttg actctcagcg
      181 ggcacaaact ccaagaacgc ggcggccgct ggctaaagct cttgagcggc atcgttatgc
      241 tggcactcgg tctggtcttg ctgctcagac ccgagtggct cgggaagatt ggctgatagg
      301 cgccgtagcc ggaaacacag gcggtcaata atgcgacgcc gcacaacggt aattcctctg
      361 ttgttgatcc tcgggatatc cggctgtggc tggatccgcc aaaaccgcgt ggtaaattct
      421 ccaggactgg gtcgcatcga caacaatatc tacaccagtc cgcgccaatc ttttcggctt
      481 cgccttccct ggcttgcacc cggcgccaga ttgcgcgacg agcaaccgac agctgataca
      541 ctactcgtga ccatcgagga tgacctgtgc cgtgaatttg tcgtttccga gcggcctggc
      601 tctctgggta aggagtcgct ccaatcatgg gtcgatgggc atatcgtcga ggagctaaag
      661 cggcttggat tcgatgtccg gagcaagccg ttaacgacgc gcaacggcac ggtgatagag
      721 ctgcgctatc gggcacccgc cgctgctcct tgtcggcaaa caaaggatgc agatggcaaa
      781 ccggtcgccg ccaagctcga tgccgacgtc ggttggtatg tttatcatcg cgatggcgtg
      841 ttctaccgct tgatctatgt cgtagccata ggcccgggcg ccccgcgcct atggtatatc
      901 aatcgcgatc ctgtcgaagc ggtgctgggg caattcgccg agggctttga aatacttgag
      961 gtgaacgccc ggcaaggtcc gacaaactaa gctgagcaag gcccggccgt ttcgcctcag
     1021 gctggtgcca aaccatcgac ccgctaatca tcgcgcacat cctggattca agatgacgat
     1081 agagcaatgg catacctcga tgtcaatctc agactgctgg gcatggcggt cgattattca
     1141 cgcaaacgcg accgcccagc cgtcactcac gagaattggc aacgatagtt ttgtcagttg
     1201 tgaaaaatat ttaccgccgc ctcgacgcag gcccatggca cggcgcttgc gctgctattg
     1261 gcttgacggg cgcgttatca aacagccggt gatacttcgc gcccagagtt ccgcggcatg
     1321 ccggctgacc aaggagtctg accatgactg gcgtaatttt cctcatcgcc ggggttatca
     1381 ttatcggcct ctatttcgtc gtcgctcctg cggttcttag cagctaccgc cgctaccgcg
     1441 gccgccgaac gatcatctgc ccggaaaccg atcaaatcgt cgaaatggaa ttgaaagccg
     1501 gtcgggccgg tgtcatggca gcgctcggga agcaggatct gcgcgtcaaa tggtgcagcc
     1561 tttggccacg acggaagggt tgtgcggagg aatgcgtaaa ggacgattgg cccgcagccg
     1621 gtgaaccgcg cgccgacgat aggagtcatg cgaacggcgt ttagaaacag cgagtgctga
     1681 aagctttgtc atagggttga gaatttgccc gccgcgcgca aatctttgca tggctcagcg
     1741 catagacgcc gatgcgcgat taaggagaat tatgctcgtg ggttgaagca tccaccagcg
     1801 ccgccactcg gcggccttcg g
//
LOCUS       DATIRS010000066         2109 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_5328, whole genome shotgun sequence.
ACCESSION   DATIRS010000066 DATIRS010000000
VERSION     DATIRS010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2109
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5328"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            124..972
                     /locus_tag="VLM90_00800"
     CDS             124..972
                     /locus_tag="VLM90_00800"
                     /inference="COORDINATES: protein motif:HMM:NF041278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CmcJ/NvfI family oxidoreductase"
                     /protein_id="HSQ11518.1"
                     /translation="MLQAGEQNSQIESVQSTLNYIIPGGEKPVTESNLPGEVRVTSNT
                     GNYQAHAVTIRNGRLASGFSLDKEGFLLVKHETKMKDFYNDDEVKRVYYPEIEQLVKR
                     ATGAARVLVFDHTLRAENDAVREEKFASRPVRSVHNDYTEWSGPQRVRDLLPQEEAEA
                     LMQKRFSVIQVWRPVRNPVVSAPLAIADSQSIAAKDLIGTERRYPDRVGEIYHLTHNP
                     NHRWFYFPNMQTDEAIVFKCYDSMKDGRARWSAHAAFDDPNSPASSTGAPARESIEMR
                     TLAFFD"
     gene            complement(1234..>2109)
                     /locus_tag="VLM90_00805"
     CDS             complement(1234..>2109)
                     /locus_tag="VLM90_00805"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HSQ11519.1"
                     /translation="MFAMRPPIATDDFVDQAIAGLKELGVAGERVGVDYLNLTAIDGL
                     KAKGVNLVDGCQTVHQARVVKTVDELQLIRWTTKAKAKGYDLVRGALRKADPPEDQLS
                     RIMLDYLMDQGFEAGSEFISIYDSSTIDSRPHNEPMGADLVVKEGDLVICDATVAGPG
                     GYYSDFCRTFSRGAPTAETKQRYKEAYGSLQQAIQFVRPGSCAEAFKSFGKGASARLP
                     GFDGFHGVGLCIYESPWLRGGDPEKYMISLEENMIVACEINHYPVKLEHLLRVTKDGG
                     EILSEYPVDPELVPA"
BASE COUNT          483 a          575 c          621 g          430 t
ORIGIN      
        1 agtggcagaa ggcgttgcgc gagctcgggc gaaaatcatg attgggatgg actcgttcaa
       61 accgttcaaa tagttcaaaa cgttcaagtc gtcagaacca acagtaatcg acggaggtct
      121 ctcatgttgc aggccggtga acagaattca caaatagagt cggtgcaatc gacgttgaat
      181 tacatcattc caggcggtga gaaaccggtg accgagtcca acttgccggg cgaagtgcgg
      241 gtcaccagca ataccggaaa ctaccaggcg catgcggtga caatccgcaa cggccggctg
      301 gcgagtggat tctctctcga caaggaaggc ttcctcttgg tcaaacatga aaccaagatg
      361 aaggatttct acaacgacga cgaagtgaaa cgggtttact acccggagat cgagcaactg
      421 gtaaagcggg cgaccggcgc cgcgcgggtc ttggtattcg atcatacgct gcgcgcggag
      481 aatgacgcag tgcgcgaaga aaaattcgcc agccggccgg tgcgcagtgt gcacaatgat
      541 tacaccgagt ggtcggggcc gcagcgggtg cgcgatctat tgccgcagga agaagctgag
      601 gcgttgatgc aaaaacgttt cagcgtgatt caagtgtggc gtccagtgcg taacccggtg
      661 gtttccgcgc cgctggcgat cgccgattcg caaagcatcg ccgctaaaga tttgatcggc
      721 accgaaaggc gctatccaga ccgcgtcggc gagatctatc atctcaccca caatcccaac
      781 catcgctggt tctactttcc caacatgcag accgacgaag cgattgtttt caagtgctac
      841 gattcgatga aagacggccg cgcgcgctgg tccgcccatg cggcgttcga cgatcccaac
      901 agcccagcta gttcaaccgg cgcgccggcg cgcgagagta tcgagatgcg cacactggcg
      961 ttcttcgatt gatcggatga tttaaccaca aagagcccag cgcggcacag ccgcaaccga
     1021 aggaaagaag agatttaacc acaaagggca catagttcac aaagttcgga tttggagaat
     1081 taaccgcaaa aggcttagcg cggcatagcc gcaaccaaaa gaagaatggc cgcaaagaac
     1141 gtaaagttcg caaaaagaag aattggattc gtttgggcgc agcttgctgc gcccttctag
     1201 tgtgaccttg tgctctttgt ggttaaattc ttcctaggcc ggaaccagtt ccggatcgac
     1261 cggatactct gacaggatct cgccgccgtc tttggtcact cgcagcagat gttcgagctt
     1321 cactgggtag tggttgatct cgcaggcgac gatcatgttt tcttccagcg agatcatgta
     1381 tttttccgga tcgccgccgc gcagccaggg cgattcataa atacacaaac cgacgccgtg
     1441 gaagccgtcg aagccgggca ggcgggcgct ggcgcctttg ccgaaggatt tgaacgcctc
     1501 ggcgcaggag cctgggcgga cgaactggat cgcttgctgc agcgaaccat aggcttcttt
     1561 gtagcgctgt ttagtttcgg ccgtcggcgc gccgcggcta aaggtgcggc agaagtcgct
     1621 gtagtaaccg ccggggccgg cgacggtggc gtcgcagatg actagatcgc cttccttgac
     1681 caccagatcg gcgcccatcg gctcgttgtg cggccgcgag tcgatggtcg aggaatcgta
     1741 gattgaaata aattcgctgc cggcttcgaa gccttgatcc attaaataat cgagcatgat
     1801 gcggctcaac tgatcttccg gcgggtcggc tttgcgcagg gcgccgcgca ccagatcgta
     1861 acccttagcc ttggctttgg tcgtccagcg gattagttgc agttcatcca ctgttttgac
     1921 gacgcgcgcc tggtgcacgg tctggcagcc gtcgaccagg ttcacgccct tggctttcaa
     1981 tccgtctatc gccgtcaagt tcagataatc gacgccgacg cgctcgccgg caacgcccag
     2041 ttccttcaaa ccggcgattg cctgatcgac aaagtcgtcg gtggcgatgg gtgggcgcat
     2101 ggcgaacat
//
LOCUS       DATIRS010000067         6656 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_988835, whole genome shotgun sequence.
ACCESSION   DATIRS010000067 DATIRS010000000
VERSION     DATIRS010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 6656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6656
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_988835"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..319
                     /locus_tag="VLM90_00810"
     CDS             <1..319
                     /locus_tag="VLM90_00810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11520.1"
                     /translation="GSTSWHIDCCTEQSIRNSRTERDNMEAMEAVEAVEVLEPVVTNE
                     VSAVYDIHYENATFQAAVCHRCGAKMFPVELLEAHMDRHQLKDMFLESELKKLQYAMN
                     RMR"
     gene            598..1635
                     /locus_tag="VLM90_00815"
     CDS             598..1635
                     /locus_tag="VLM90_00815"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HSQ11521.1"
                     /translation="MKAVRMHGYGGAEQLLYESCEPPKLTEPNEVIVKLKAAALNHID
                     IWNRMGATGIDVAMPHILGADGAGVVVETGAKVENVHVGDAVCLYPPTGCGQCEFCRT
                     ERDFMCIRLRVLGERLEGTYAQYVKLPGQNCFPIPNGYSFHEAAAFPLVFITLWRMAI
                     TNAALQPGETMLIIGIGGGVASATLQVAKQIGARVIVTSSSDAKLERAKSLGADHGVN
                     HHRESFVTAVQSLTDRRGVDVVLDCVGGEVWRQSLASLASGGRLITCGATAGGQPQDD
                     IAAIIAKQLKIYGSTLGSRREFFQLISFLNATKIKPIIDSVFPLRDAASAQRYLEAAK
                     QFGKVVLEMPD"
     gene            complement(1720..2031)
                     /locus_tag="VLM90_00820"
     CDS             complement(1720..2031)
                     /locus_tag="VLM90_00820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11522.1"
                     /translation="MNSRIRSIQFLAGTLLLSSSVLWAADGVISRSPDASGQSCHLKF
                     PAIRENTLHFDRPQLKDPSEGDIIDFYGPCNYDPLGKAEVMRQREDYRRYRNRFDGET
                     D"
     gene            complement(2123..3085)
                     /locus_tag="VLM90_00825"
     CDS             complement(2123..3085)
                     /locus_tag="VLM90_00825"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ11523.1"
                     /translation="MQHAKINFGVLLPTREAIMSGRADPSALFQIAERAEALGFHSVW
                     VGDSLTARPRIDALTTLAAIGARTQRVRLGTAIFLAALRNPILLAYQLASLDWMTGGR
                     VDLGVGYGRPKDPAAEHEFEILGLDPSARMKMSEELVQVMRRLWSENDVTHAGKFSHF
                     DHVTLEPKPSQPGGVPIWLASNAVEPGLKRVARLADGWLNNIKSPELFGECWQKIQEY
                     AAAAGRKPESIHPGIYFTLAAGGKDAVVEGQQFLAQYYNRSYEAVANAMLCVTGSWDE
                     VIDWTEKYVEAGARTVVLRFAANDQLRTLEACAEALKRRGLFAQ"
     gene            complement(3179..3634)
                     /locus_tag="VLM90_00830"
     CDS             complement(3179..3634)
                     /locus_tag="VLM90_00830"
                     /inference="COORDINATES: protein motif:HMM:NF024844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /protein_id="HSQ11524.1"
                     /translation="MIGKTFEEFHAGERYSTGRRTITEHDILTFVNLVGLTEPLFLDM
                     EYIRKESLYGERIAPGSLTFGMAEGLTVQTGLIHGTGMAFAGLDKMRLFSPVKVNDTI
                     QVEIEVLDTKPVPARGGGIVRYRQWVKNQHGETIMEYDVARLIRGAENS"
     gene            complement(3631..4833)
                     /locus_tag="VLM90_00835"
     CDS             complement(3631..4833)
                     /locus_tag="VLM90_00835"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HSQ11525.1"
                     /translation="MSEANNGALHGIRVLYLTRVLAGPYCTMFLGDLGAEVVKVEQPG
                     VGDDTRGWGPPFAGGESAYFLCTNRNKKSLTVDFKSADGIALVRQLAERADVLIENFR
                     PGAMERLGLGEKLLREKNSRLVYASLSGFGADGPMADIPGYDLIVQAWGGLMSVTGSA
                     ESGPLKVGVAIIDLVAGLMLGKSIVAALYAREKLGVGQKLDTSLLEAEVAALINAGSN
                     YLIGGQVPGRWGNAHPTIVPYQSFQTADSFLVLGAASETIWQRLCPALGRAELADDPR
                     FAKNADRVENRKELIARLSTIFLTRTTNDWVAALTAADVPCAPVQTIDQVFAAPQVLH
                     RNMLVEVDHPTAGKVKLAGIPVKFSATPASVRLPPPLLGEHCADVLSSWLGMSIEEIE
                     RLKRKSVL"
     gene            complement(4896..5270)
                     /locus_tag="VLM90_00840"
     CDS             complement(4896..5270)
                     /locus_tag="VLM90_00840"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HSQ11526.1"
                     /translation="MAQDAKDAFEKTALGAQNKAYDLIAQMDPEYFEKLKGIYVDGTF
                     GREGALPRKTKELIMVGICCALNRPRGVKLHSERALTLGAAPREVLEAVEVAAIPGGM
                     PGLWLGVETLNDILKAKGIEFK"
     gene            complement(5470..>6656)
                     /locus_tag="VLM90_00845"
     CDS             complement(5470..>6656)
                     /locus_tag="VLM90_00845"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSQ11527.1"
                     /translation="LLGEPINVENPDAERSRVSPRIAGDPEAFADAAKMLAHAKRPLI
                     VAGSAIARARATEELIKFAELVAAPVVMEPRYSFLSFPTTHPQSFQIAERQPSFDLPV
                     WGEPDVIIAIGCRLIREYRYIPEPVIKPSTKIFHIEEDPWEIGKVFPVDIGIVADAKS
                     ALKSLIECYAKVEPATGVKSERLECLRKAKDQATGEIDSRVSKGWDATPINAARVART
                     MDRLVEKDALIVNESPTSKDLLMSNFQFSPGRDYFSNSSGGYLGWGLGAAIGAKLAAP
                     KRRVVACLGDGSTMFGLQGLWTLARYRIPLVVIVFNNRAYMAVKNQFRGTEERIRISA
                     DMGAEITGPEINFARLAETFGIHGERVEHPDAIEAALKRALDQSGPALVDVVISQNTR
                     KD"
BASE COUNT         1298 a         1902 c         2038 g         1418 t
ORIGIN      
        1 cggctcaaca agctggcata ttgattgctg tacagagcaa tcgatccgta attctaggac
       61 agagagggac aacatggaag ctatggaagc cgtggaagct gtggaagttt tggaacctgt
      121 cgtcaccaac gaagtaagcg cagtctatga cattcactac gaaaacgcga ctttccaggc
      181 ggcggtgtgc caccgttgcg gcgccaagat gttcccagtg gagctgctcg aagcgcatat
      241 ggatcgccac caacttaaag atatgttcct cgagagtgag ctcaagaaac tccagtacgc
      301 aatgaatcga atgcgatagg ctgacgattt cgccggctcc ggccggcaac ctgtgttccc
      361 aggcgcaggc gtggattcct cctcggttca cgcttgcagt atcatcccca gggtgtcccc
      421 aataagggga cacccttccc ttaaaaaatc tcccatattt caagttcttt gcgattgcgc
      481 cactgcgttg gctgatttgc catcggtatg gcgcgatgcg tgtgacggcg tctgtggccc
      541 gtcaaattga cttcaaagtt tcgccttgtt aaccaatgat ctccagggag aatcctattg
      601 aaagccgttc gcatgcatgg ttacggcggc gcggagcaac tgttatacga aagctgcgag
      661 ccgccgaagc taaccgaacc caacgaagtc atcgttaagc tcaaggccgc tgcgctcaat
      721 cacatagata tctggaaccg catgggcgcg acggggatcg acgtcgcgat gccgcatatt
      781 ctcggcgccg acggcgccgg cgtagtggtt gagaccggcg ctaaggttga gaatgtccat
      841 gtcggcgacg cggtctgtct ctatccgccg accggctgcg gccagtgcga attttgccgc
      901 accgagcggg attttatgtg tatccggctg cgcgtgctcg gcgagcggct cgaaggcacc
      961 tacgcccaat atgtgaaatt gccggggcaa aactgttttc cgatccccaa cggttattca
     1021 ttccatgaag ccgcggcgtt tccgctggtg ttcatcacgt tgtggcgcat ggcgattacc
     1081 aacgcggcgc ttcagccggg cgagaccatg ctgattatcg gcatcggcgg tggtgtggcg
     1141 agcgcaactc tgcaagtggc caaacagatc ggcgcccggg tgatcgtcac ctcaagcagc
     1201 gatgccaagc tcgagcgcgc caagagtctc ggcgccgatc acggcgtcaa tcatcaccga
     1261 gagagttttg tcacggccgt gcagtcgctg accgatcggc gcggcgtcga tgtcgtgctc
     1321 gattgcgtcg gcggtgaagt gtggcggcag agtctggctt cgttggcgag cggcggcagg
     1381 ttgatcacct gcggcgccac ggcgggcggg cagcctcaag acgatatcgc ggcgatcatt
     1441 gccaagcagt tgaagattta tgggtcgacg ctgggcagcc gccgggaatt ttttcagctc
     1501 atcagttttc tcaatgcgac taagatcaaa ccgattattg acagcgtatt cccgctccgt
     1561 gatgcggcca gcgcgcagcg ctatctcgaa gcagcgaagc agttcggtaa agtggtgctg
     1621 gagatgccgg actgagaatt ggcgcggcgc gacgctgcgc agcgattgtt cctctgattc
     1681 taatcgattg gcggcgcggg attggcgccg atccgcgtct caatcagtct cgccgtcaaa
     1741 gcgattgcgg tagcgccggt agtcttcgcg ctggcgcatg acctccgctt ttcccaacgg
     1801 gtcgtaatta cagggtccgt agaagtcgat gatatcgccc tcgctgggat ccttgagctg
     1861 gggacggtca aaatgaaggg tattttcacg gatcgccggg aacttgagat ggcaagattg
     1921 tcccgaagca tcggggctgc gcgagatgac gccgtcggct gcccagagca ccgaactgga
     1981 tagcagcagt gtgccagcga gaaattgaat ggatcgaatt cgactgttca taaaccgctc
     2041 ctttcagacg acaattgatc gcgatgtcaa ttatcctaca tcaggacttg cccaggtgat
     2101 agaccccccg gtgcgcttac gatcactgcg caaacaagcc gcggcgtttg agcgcttcgg
     2161 cgcaagcttc gagagtgcgt agttggtcgt tggcggcgaa gcgcaagacc acagtgcggg
     2221 cgccagcctc gacatacttc tcggtccaat cgatcacttc atcccaggag ccggtgacgc
     2281 agagcatggc attggccacc gcttcatagg agcgattata gtactgcgcc aagaactgtt
     2341 gcccctctac caccgcgtcc ttgccgcctg ccgccagggt gaaataaatt cccggatgga
     2401 tcgactcggg cttgcgcccg gcggctgcgg cgtattcttg aatcttttgc caacactcgc
     2461 caaagagttc ggggcttttg atgttgttga gccagccgtc ggcgagccgg gcgacgcgct
     2521 tcaggccggg ctctacggcg ttcgacgcca gccagatcgg caccccgcca ggttggctcg
     2581 gtttcggttc gagggtcacg tgatcgaaat ggctgaactt gccggcatgg gtgacgtcgt
     2641 tttcgctcca gagccgacgc atgacttgga ccagctcttc gctcattttc atgcgcgcgc
     2701 tgggatcgag gccgaggatt tcaaactcat gttccgccgc cgggtccttc ggccggccgt
     2761 agccgacgcc gagatcgacc cgtccgccgg tcatccagtc gaggctggcg agctggtaag
     2821 cgagcaggat cggattgcgc agcgcggcga gaaatatcgc cgtgcccaaa cggacccgct
     2881 gcgtgcgcgc gccaatggct gccaaggtgg tcagcgcatc gatgcgcggc cgcgccgtca
     2941 aactatcgcc gacccacacc gagtgaaagc ccaaagcctc ggcgcgttcg gcaatttgaa
     3001 acagagccga cggatcggcg cgtccggaca ttatcgcttc gcgggtgggt aataatacac
     3061 caaagttgat ttttgcgtgc tgcattggat cgctcgctgt attttccttt aagtttattg
     3121 aactcgtaaa gggtgaaagg caaggcgtcg ggatcgctaa ccctttaccc ctcacgcctc
     3181 acgagttctc cgcgccgcga atcaatcgcg cgacatcgta ctccatgatc gtttcgccgt
     3241 gctgattctt gacccactgg cggtagcgga cgatgccgcc gccgcgggcc gggacgggct
     3301 tggtatccaa cacttcgatt tccacttgga tggtatcgtt gactttgacc gggctgaaca
     3361 ggcgcatttt gtcgagtccg gcgaaggcca tgccggtgcc gtgaattaga cctgtctgca
     3421 cggtcagccc ctcggccatg ccgaaggtga gactgcccgg cgcgatgcgc tcgccgtaga
     3481 gactttcctt gcgaatgtat tccatgtcca aaaacagcgg ctcggtgagg ccgaccaagt
     3541 tcacaaaggt caggatgtcg tgctcggtaa tcgtccgccg gccggtgctg tagcgctcgc
     3601 cggcatggaa ctcttcgaaa gtcttaccaa tcataggacg ctctttcttt ttaatcgttc
     3661 gatctcttcg atactcattc cgagccagga tgacaagaca tctgcgcaat gctcgcccaa
     3721 tagcggcggg ggcagccgca ccgatgccgg ggtggcggaa aactttaccg gaatgccggc
     3781 gagtttcacc ttgccggcgg tgggatggtc gacttcgacg agcatatttc ggtgcagcac
     3841 ttgcggcgcg gcaaaaactt gatcgatggt ttgcaccggc gcgcagggga cgtcggcggc
     3901 ggtgagcgcg gcaacccagt cgttggtcgt gcgggtcaga aaaatggttg agagcctggc
     3961 gatcaactct ttacgattct cgacgcggtc ggcgttctta gcgaagcgcg gatcgtcggc
     4021 gagttcggcc cgtcccagcg ccgggcagag gcgctgccag atcgtttcgc tggcggcgcc
     4081 aagcaccaaa aaactgtcgg cggtctgaaa gctctggtag ggcacgatgg tcggatgggc
     4141 gttgccccag cggccgggaa cttggccacc gatgagatag ttgctgccgg cgttgatcag
     4201 cgcggcgact tcagcttcca aaagtgaagt gtcgagcttt tggccgaccc cgagtttttc
     4261 tctggcataa agcgcggcga cgatcgactt gccgagcatc aaacccgcga ccaggtcgat
     4321 gatcgcgacg ccgaccttga gcggtccgct ctcggcgctg ccggtgacac tcatcaagcc
     4381 gccccaggct tggacgatca aatcatagcc cggtatgtcc gccatcggcc cgtcggcgcc
     4441 gaaacccgat agcgaagcat aaaccagccg cgaatttttt tcacgcaaca gtttttcgcc
     4501 caagcccaaa cgctccatgg cgccgggacg aaagttttca attagcacgt cggcgcgctc
     4561 ggcgagctgg cggacaagcg cgatgccatc ggccgacttg aagtcgacgg tgaggctttt
     4621 tttgttgcga ttggtacaga gaaaataagc gctctcgccg ccggcgaagg gcggccccca
     4681 gccgcgggtg tcgtcgccga cgccgggctg ctcgactttc acgacttcgg cgccgagatc
     4741 gcccaagaac atggtgcagt aggggccggc gaggacacgg gtgaggtata ggacgcggat
     4801 gccgtgtaag gcgccgttat tcgcttcgct catagaagtg ggactcgttc aaaaggttca
     4861 accgttgtgc tcggtgcaag cggttcgccc ctacgctatt tgaattcgat gcctttggct
     4921 ttgagaatgt cgttcaacgt ttcgacgccg agccagaggc cgggcatgcc gccggggatg
     4981 gccgcgactt cgacggcttc caagacttcg cgcggcgcag cgcccagggt cagcgcgcgt
     5041 tcgctgtgca gtttcactcc gcgcgggcgg ttgagcgcgc agcagatgcc gaccatgatc
     5101 agctccttgg tcttgcgcgg cagggcgcct tcgcggccga aggtgccgtc gacgtatatg
     5161 cctttgagct tctcgaaata ctccgggtcc atttgcgcga tcaagtcgta ggccttgttc
     5221 tgcgcgccca acgcggtttt ttcaaaagca tcttttgcat cttgagccat ggttgcctcc
     5281 ttatgagttc gcaccgttaa gattattctc tcgcaaaggc gcaaagacgc caagttcgga
     5341 atcgttgtca tttcgaccag agggagaaat ctctcttaga ttccttgcct tcgctcggga
     5401 tgacgggcac cggcctgtca cctttgcgcg ccttgcgcct ttgcgggaga tattccgatt
     5461 tctctagcat caatccttcc gggtgttctg gctgatcacg acgtcgacca gcgctgggcc
     5521 ggattgatcc aaggcgcgct tgagcgctgc ttcgatggcg tcgggatgtt cgacgcgctc
     5581 tccatggata ccgaaggttt cggcgagcct ggcgaagttg atttccggac cggtgatctc
     5641 ggcgcccata tcggctgaga tgcgaatgcg ctcctcggtc ccgcggaact gatttttaac
     5701 cgccatatag gcgcgattgt tgaagacgat gacgaccagg ggaatgcggt acctggcaag
     5761 cgtccataaa ccctggaggc cgaacatcgt gctgccgtcg cccaagcagg cgacaacgcg
     5821 ccgtttcggc gcggcgagct tggcgccgat ggcggcgccc aagccccaac ctaagtagcc
     5881 gccggatgag ttggaaaaat aatcccgtcc cggcgaaaac tgaaagttgg acatcaaaag
     5941 atctttactg gtggggctct cgttgacgat caaggcatct ttctcgacca gccggtccat
     6001 ggtgcgggcg accctcgcgg cgttgatcgg cgtggcgtcc caacctttgc tgacacggct
     6061 atcgatctcg ccggtggctt gatccttggc tttgcgtaga cattccaaac gctcggattt
     6121 cactccagtt gccggctcga ctttcgcgta gcattcgatc agcgacttga gtgcgctctt
     6181 ggcgtcggcg acgatgccga tgtcgacggg aaaaaccttg ccgatctccc agggatcttc
     6241 ttcgatgtga aagatcttcg tcgacggttt gattaccggt tcggggatat agcggtactc
     6301 gcggatcagg cggcaaccga tggcgatgat gacgtcgggt tcgccccata cgggaagatc
     6361 gaaagagggt tggcgctcgg cgatttgaaa actctgcggg tgggtggtcg gaaaggacag
     6421 aaatgaatag cgcggttcca tcaccaccgg cgcggcgacc aactcggcga atttgatcag
     6481 ttcctcggtg gcgcgtgccc tggcgatggc gctgccggcg acgatcaacg gccgcttggc
     6541 gtgggcgagc attttggcgg catcggcaaa ggcttcggga tcgccagcga tgcgcggcga
     6601 gacgcgcgaa cgctcagcgt cgggattctc tacattgatc ggttcaccca gcaggt
//
LOCUS       DATIRS010000068         1801 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_300669, whole genome shotgun sequence.
ACCESSION   DATIRS010000068 DATIRS010000000
VERSION     DATIRS010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1801
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_300669"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..544)
                     /gene="pyrH"
                     /locus_tag="VLM90_00850"
     CDS             complement(<1..544)
                     /gene="pyrH"
                     /locus_tag="VLM90_00850"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: protein motif:HMM:TIGR02075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HSQ11528.1"
                     /translation="MNNGAPKYKRIILKVTGEVFAGPGNFGIDGKTVKAFAQEIKEVK
                     DLGCELALVIGGGNIFRGAVASEIGMDRASADTMGMLATVINSLALQDALEKIGVSTR
                     VLSALEMRQVAEPYIRRRATRHLEKGRVVIFAGGTGNPYFTTDTTASLRAMEVGAEVI
                     LKATKVDGIYDADPFKQSDAN"
     gene            complement(564..1172)
                     /gene="tsf"
                     /locus_tag="VLM90_00855"
     CDS             complement(564..1172)
                     /gene="tsf"
                     /locus_tag="VLM90_00855"
                     /inference="COORDINATES: protein motif:HMM:NF013085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HSQ11529.1"
                     /translation="MEVTASLVKELREKTGAGMMDCKKALAETAGDLSKAVDYLRQKG
                     LAAAAKKADRVAADGAIGAYVHAGGKLGVLVEINCETDFVARTAEFQSLLKDVAMQVA
                     ATNPRCVRREEVSADEFEREKVIYRQQALESGKPEKVIEMIVQGKMEKFYSEVCLLEQ
                     SFVKDPDKKVIDVVNDAIARLGENIQVRRFARYHLGEGVAKG"
     gene            complement(1178..>1801)
                     /gene="rpsB"
                     /locus_tag="VLM90_00860"
     CDS             complement(1178..>1801)
                     /gene="rpsB"
                     /locus_tag="VLM90_00860"
                     /inference="COORDINATES: protein motif:HMM:TIGR01011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HSQ11530.1"
                     /translation="DLEAVVRDLAASGGHVLFVGTKKQAQDAIREEATRCGMYYVHNR
                     WLGGTLTNFTTIRQSIERLRKIEEMENDPKVVDALTKKEMLGLSREKDKLEQSLGGIK
                     AMKKLPDAIFVIDPKQEEIAVKEARKLGVPVIAVIDSNCDPDMIDYKVPGNDDAIRAI
                     RLFCSAIAEAVIEGRTMYEQSLVKEKGDDRQGGDGAAATMESAVGGV"
BASE COUNT          352 a          558 c          449 g          442 t
ORIGIN      
        1 tattggcgtc ggattgcttg aacgggtcgg catcgtaaat accgtccact ttagtcgcct
       61 tgagaatcac ttcggctccc acttccatgg cgcgcaagct cgccgtggta tccgtggtga
      121 aataaggatt gccggtgccg ccggcaaata tgacgacgcg gcctttttct aaatggcggg
      181 tggcgcgccg gcggatatac ggctcggcga cctggcgcat ttcgagggcg gacaagaccc
      241 gtgtcgacac cccgatcttc tccaaagcat cttgcagcgc gagactgtta atgacggtgg
      301 cgagcatgcc catggtatcg gcactggcgc ggtccatgcc gatctcgctc gccactgcgc
      361 cacggaaaat gttgccgccg ccgatgacga gtgcgagttc acagccgaga tccttgacct
      421 ctttgatttc ctgggcgaaa gccttaacgg tcttgccgtc gatgccgaaa ttaccggggc
      481 cggcaaacac ctcgccggtc actttcaaaa tgatccgttt atatttcggt gcaccgttgt
      541 tcatgacgtg attccgctaa gcgctagccc ttcgccaccc cttcgccaag gtgatagcgg
      601 gcaaagcggc gcacctgaat attctctccc aatcgcgcga tcgcatcgtt gacgacatca
      661 atgactttct tatcgggatc tttaacaaac gactgttcca gcaagcagac ttcagagtaa
      721 aacttctcca tcttgccctg gacaatcatc tcgatgactt tttccggctt gcccgactcc
      781 agcgcttgtt ggcgatagat aaccttttcg cgctcgaatt cgtcggctga gacttcctca
      841 cgacggacgc aacgcggatt ggtcgccgcg acttgcatgg cgacatcctt cagcaaactt
      901 tggaattctg cggtacgggc gacgaaatcg gtctcgcaat tgatttcgac caagacgcca
      961 agcttgccgc cggcatggac ataagcgccg atggcgccat ccgcagccac gcgatcggct
     1021 ttctttgccg ccgcggccaa ccccttttga cgcaaataat cgaccgcctt tgacaaatct
     1081 ccagcggtct cggcaagcgc ttttttacaa tccatcatac cggctccggt tttttcccga
     1141 agctctttga ctaaactcgc tgtcacttcc atgtcgccta aactcctccg accgcgcttt
     1201 ccatcgtcgc cgcggcgcca tcgccaccct gccggtcatc gcccttctcc tttactaagg
     1261 actgctcgta catcgttcgc ccttcaatca ccgcctcggc gatcgccgag cagaacaatc
     1321 gaatcgcccg gatcgcgtcg tcattgccgg gcaccttgta atcgatcata tctggatcgc
     1381 aattactgtc gatcaccgcg attactggga caccaagctt acgtgcttct ttgacggcga
     1441 tttcttcttg tttcggatcg atgacaaaaa tggcgtcggg cagtttcttc atcgccttga
     1501 tcccacctag cgattgctcc agcttgtctt tttcacggct gagaccgagc atttccttct
     1561 tggttagcgc atcgacgacc ttaggatcgt tctccatctc ttcgatctta cgcaatcgtt
     1621 cgatgctctg gcgaatcgtc gtaaagttgg ttagcgtacc gccgagccag cgattgtgga
     1681 catagtacat gccgcagcgg gtcgcttctt cgcggatcgc atcctgggct tgtttcttag
     1741 tgccgacaaa cagcacatgg ccgccggagg ccgccaggtc gcgcaccacc gcttcgagat
     1801 c
//
LOCUS       DATIRS010000069         1870 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1677358, whole genome shotgun sequence.
ACCESSION   DATIRS010000069 DATIRS010000000
VERSION     DATIRS010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1870)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1870)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1870
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1677358"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            52..1071
                     /locus_tag="VLM90_00865"
     CDS             52..1071
                     /locus_tag="VLM90_00865"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ11531.1"
                     /translation="MAVIDADAHVIENESTWDYMLESERQFRPKVVGATSAKDAFDYW
                     LVDGRVIPRNNVGRDLPVAAREMSDLTVRIKHMDELGIDCQVIYPTFFITPVSRRPDI
                     DLAVARSYNRWMADIVKKAPDRFRWVLVPPLQSTEHLAEELKFGKENGACGVYMRGLE
                     VERSLSDPYFYPLYEQASALDLPICVHSANGAFTTYDFFADDPGFSKFKLAVIGAFHS
                     FVFHGVPQRFPKLRIGIIEVSAQWIPYAVHDLARRFARRGRQFPASVLKENRIYVTCQ
                     TDDDLDQVLRYADEDNLVIGTDYGHADNAAEIEALRKLRNDGKLPGRVIDKILDDNAR
                     ALYAI"
     gene            1103..>1870
                     /locus_tag="VLM90_00870"
     CDS             1103..>1870
                     /locus_tag="VLM90_00870"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ11532.1"
                     /translation="MLTIDADAHVIECEKTWDYLEGDDKRYRPVPIAVDMPTGKKQNF
                     WIIGGRLIGGRDNVGQDTAKESREMANIDSRLKHMDEIGTGVQVLYPTLFLRPVTDNP
                     RIELALCRSYNRWMADIWSKNKKRLRWAVQLPLMTMDKALDELRWSHGNGACAVFMRG
                     IETHHTLHDPYFYPLYEEASRLNMPIGIHSGIGNFTVNDMLGAEPFRVAKLIVIGGFH
                     SMILNGIPEKFPKMRIGAIEVAAQWVPYLVHDLNLRFP"
BASE COUNT          412 a          540 c          543 g          375 t
ORIGIN      
        1 ggcaatagcc attaagcaac aggcaatagt gaagaagaaa ggtaagccaa gatggcagtg
       61 atcgatgcgg atgcgcacgt gatcgagaat gaatcgacgt gggattacat gctcgaatcc
      121 gagcgccagt tcagacctaa agtcgtcggc gcgaccagcg cgaaggatgc ttttgattat
      181 tggctggtcg atgggcgagt gattccccgc aacaacgtcg gccgagatct ccccgtggcg
      241 gcgcgcgaga tgagtgatct caccgtgcgc attaagcaca tggatgagct cggcatcgat
      301 tgccaggtga tctatccgac cttcttcatc acgccggtga gccgccggcc ggacatcgat
      361 cttgccgtcg cgcgcagcta caaccgctgg atggccgaca tcgttaagaa agcgccggat
      421 cgtttccgct gggtcctggt gccgcccttg cagagcacgg agcatctcgc cgaagagctc
      481 aagttcggca aagagaacgg cgcctgcggc gtttacatgc gcggcctgga agtcgaacgc
      541 agtctgagtg acccctattt ttatccgtta tacgagcaag ctagcgccct ggatctgccg
      601 atctgcgttc attccgccaa cggcgcgttt accacctatg attttttcgc cgacgacccg
      661 ggtttttcca agttcaaact ggcggtgatc ggcgcgtttc attccttcgt attccacggc
      721 gtgccgcagc gctttccgaa gctgcgtatc ggcatcatcg aagtgagcgc ccagtggatt
      781 ccctacgccg tgcatgatct tgcgcgccgg tttgcccggc gcggcaggca atttccggcc
      841 agcgtgctca aggaaaatcg aatttatgtc acctgccaaa ccgatgacga cttggaccag
      901 gtgctcagat acgccgacga agacaatctg gtcatcggca cggactacgg ccacgccgac
      961 aacgccgccg agatcgaagc actgcgcaag ttgcgaaatg acggcaaatt acccggtcgg
     1021 gtgattgaca agattctcga cgacaatgcg cgggcgctct acgcaatata gatgaagcaa
     1081 gaggttttgg aggtttgaag cgatgcttac gatcgatgcc gatgcgcatg tcatagaatg
     1141 cgagaagacc tgggactact tggaaggcga tgacaaacgc taccggccgg tgcccatcgc
     1201 cgtcgacatg ccgacaggca agaagcagaa cttttggatc attggcggac ggctcatcgg
     1261 cgggcgcgac aatgtcggcc aagacaccgc caaggagtcg cgcgagatgg ccaacatcga
     1321 ttcgcgcttg aagcacatgg acgaaatcgg caccggcgtg caggtgcttt acccgacgct
     1381 gtttctccgg ccggtcaccg acaacccgcg catcgagctg gcgctctgcc gctcctataa
     1441 ccgctggatg gccgacatct ggtccaaaaa taagaagcgc ctgcgctggg cggtgcaact
     1501 gccgctgatg accatggaca aagcgctcga cgaactgcgc tggtcgcacg gcaatggtgc
     1561 ctgcgcagta tttatgcgcg gcatcgaaac ccatcacacg ctgcacgatc cttactttta
     1621 tccgctctac gaagaggcga gccgactcaa catgcccatc ggcattcatt ccggcatcgg
     1681 caactttacg gtgaacgaca tgctcggcgc cgagccgttc cgggtcgcca agctgatcgt
     1741 gatcggcggc tttcactcca tgattctgaa cggcatcccg gaaaagtttc ccaaaatgcg
     1801 catcggcgcg attgaggtcg cggcgcagtg ggtgccgtat ctggtgcatg atttaaactt
     1861 gcgcttcccc
//
LOCUS       DATIRS010000070         1628 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_595824, whole genome shotgun sequence.
ACCESSION   DATIRS010000070 DATIRS010000000
VERSION     DATIRS010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1628)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1628)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_595824"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..869
                     /locus_tag="VLM90_00875"
     CDS             <1..869
                     /locus_tag="VLM90_00875"
                     /inference="COORDINATES: protein motif:HMM:NF014822.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0043169 - cation binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha amylase C-terminal domain-containing
                     protein"
                     /protein_id="HSQ11533.1"
                     /translation="LRRLNHVVYESYPDVQTIAEESTDWPMVSRPAQLGGLGFGLKWD
                     MGWMHDTLAYFRKDPVHRRYHQNNLTFRMIYAFHENFVMPLSHDESVHGKGSLLEKMA
                     GDDWQKFANLRALYGYMYAQPGKRLLFMGGEFAQRREWAHDSSLDWELLDYPAHAGVQ
                     RWVRDLNQLYRQEPALHELDCDPAGFEWIDCDDVESSVVSLLRKGRSTANLVVAVCNF
                     TPVPRCGYRLGVPRGGFWRESLNSDAVEYGGSGIGNHGGLESEPVAHHGRPCSLVLTL
                     PPLSISFFINNP"
     gene            897..>1628
                     /locus_tag="VLM90_00880"
     CDS             897..>1628
                     /locus_tag="VLM90_00880"
                     /inference="COORDINATES: protein motif:HMM:NF019924.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch synthase"
                     /protein_id="HSQ11534.1"
                     /translation="MIASEASPFAKTGGLADVLGTLSPALERLGHQVTLMIPAYRSVL
                     RGEFALQETGMTLSVPLSDRQEPASVLQTTIGKSVTVFLVRADKYFDRDFLYGTPIQD
                     YADNAERFVFFCRAALEILAAEPVDIVHAHDWQAALAIVFLKTQAPRYRATAGAKTVF
                     TVHNLAFQGNFSALDWHLLNLEAAFFTPQFLEYYGDVNFLKGALVFADTLTTVSPTYA
                     QEIMTPEQGFGLEGVLRQRAGDLVGI"
BASE COUNT          301 a          510 c          477 g          340 t
ORIGIN      
        1 tgctgcgccg gctgaaccat gtggtctacg aatcttatcc cgacgtccaa accatcgccg
       61 aagaatccac cgactggccg atggtctcgc ggccggcgca attgggcggc ctcggcttcg
      121 gtctcaagtg ggacatgggc tggatgcacg acacgctggc atactttcgc aaagacccgg
      181 tgcaccggcg ctaccatcaa aacaatctca cctttcgcat gatctacgcc tttcacgaga
      241 actttgtcat gccgctgtcg cacgacgaat cggtccacgg caaaggctcg ctgctagaga
      301 aaatggccgg cgacgattgg cagaagttcg ccaatctgcg tgcgctctac ggctacatgt
      361 atgcccagcc gggaaagaga ctactgttca tgggcggcga attcgcccag cggcgcgagt
      421 gggcccatga ctccagtctc gattgggaac tgctggatta tccggcccat gccggcgtgc
      481 agcgctgggt gcgcgacttg aatcagcttt atcgccaaga gccggcgctc catgagctcg
      541 actgcgaccc cgccgggttc gagtggatcg attgcgatga cgtagagagc agtgtcgtca
      601 gcttgctgcg caagggccga tcgaccgcga acctggtcgt ggccgtgtgc aattttacgc
      661 cggtgccccg ctgcggttat cgcctcggcg tgccgcgcgg cggcttttgg cgcgaatcct
      721 tgaatagtga cgccgtcgag tacggcggca gcggcatcgg caatcacggc ggactcgaga
      781 gtgagccggt ggcgcaccat ggccgccctt gttccctggt gctgaccttg ccgccactat
      841 ccatctcatt tttcatcaac aatccgtgat tcacgaccgt aacgatgaag atcgccatga
      901 tcgcttccga ggccagcccc ttcgccaaga ccggcggtct ggccgacgtt ctgggcacgc
      961 tctcgccggc gctagagagg ctcggtcacc aggtcacgct gatgatcccg gcttaccgca
     1021 gcgtgctccg gggtgagttt gcactgcaag aaaccggcat gaccctgtca gttccgctgt
     1081 ccgatcgcca ggaaccagcg tcggtgctac agacgaccat cggcaaatcg gtcaccgtct
     1141 ttctggttcg cgccgataag tatttcgacc gcgattttct ctatggcacg ccgatccagg
     1201 actatgccga caatgccgaa cgttttgtct tcttctgccg cgccgcattg gaaatcctcg
     1261 ccgccgagcc ggtcgacatc gtccacgccc atgactggca agccgccttg gccattgtgt
     1321 ttttgaaaac gcaagcgccg cgctaccgcg ccaccgccgg cgcaaaaacc gtattcaccg
     1381 tgcacaacct ggcctttcaa gggaacttct cggcgcttga ctggcacctg ttgaatctcg
     1441 aggcggcgtt tttcacgccg cagttcttgg agtactacgg cgacgttaac tttctcaaag
     1501 gtgcgttggt tttcgccgac acgcttacga ctgtgagccc gacctacgcc caggagatca
     1561 tgacgccgga gcaagggttc ggtctcgagg gcgtgctgcg ccagcgcgcc ggtgatttgg
     1621 tgggaatc
//
LOCUS       DATIRS010000071         1586 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1775645, whole genome shotgun sequence.
ACCESSION   DATIRS010000071 DATIRS010000000
VERSION     DATIRS010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1586
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1775645"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..526
                     /locus_tag="VLM90_00885"
     CDS             <1..526
                     /locus_tag="VLM90_00885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11535.1"
                     /translation="YPRDYQLLVIGGTPQTYAALVAGSIDAAALSLPVNYAAEEQGFN
                     EIGRFVDVIANYQLAALSTKRTWAEKNRPVLVRVMRAMAQTMRWIHQNKEPAADYLAK
                     EMNLKPDHARRGWEFYTSTKTWHPDGDLNIDGLQNVTQIYWEQTQSKGPVPSAAKYVD
                     QSYLREAVKELTAR"
     gene            659..>1586
                     /locus_tag="VLM90_00890"
     CDS             659..>1586
                     /locus_tag="VLM90_00890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11536.1"
                     /translation="MKHRFAVCLFVLISWLFMVGKGSAGNHEFYRGKTVRLVVGYAPG
                     GGYDFYARAVARYMGKHVPGNPAFVVDNMPGAGSLASANHLYRIAKADGLTLGHFSGS
                     LFPLQAMGQKEISFDAARFEYVGAVAKVEIVCGFPKAGGIDSVDKWLAAKTPPRLGGT
                     APGTGGHDTTRLLAATIGAPAQLVLGYKSTGDMRLAIERGELTGLCTGWESFRSLWKK
                     QIDSGEFVIILQALAKPHPELPKVPLAVTYAKNDEARQLLQVGAHDLASLARPFVMAP
                     GTPKERVEIFRKAFTATMSDPCFLADAERANLD"
BASE COUNT          314 a          475 c          487 g          310 t
ORIGIN      
        1 gtatccgcgt gattaccagc tactggtcat cggcggcacg ccgcaaacct atgcggctct
       61 ggtcgccggc tccatcgatg cggcggcgct ttcgctgccg gtgaattacg ctgccgaaga
      121 gcagggcttt aacgaaatcg gtcgtttcgt cgacgtgatt gccaattacc agttggcggc
      181 actttcgacc aagcggacat gggcggaaaa aaatcggccg gtgctggtgc gcgtcatgcg
      241 cgccatggcg cagaccatgc gctggattca ccagaacaaa gagcccgcgg ctgactatct
      301 cgccaaggaa atgaatctca aacccgacca tgcccggcgc ggctgggaat tttacacgtc
      361 gaccaagacg tggcaccccg acggcgatct gaacatcgac ggcctgcaaa acgtcacgca
      421 aatctattgg gagcaaaccc agtccaaagg cccggtgccg agcgcggcca agtatgtcga
      481 tcaaagttat ctgcgcgagg cggtgaaaga gttgaccgcg cgctaaagtg ctctccctct
      541 gaattccacg cgcatgaatc cgctggagct accactccag caggcgcggg cggcgttgag
      601 taaacactag tttgtgttac aaattcacga ttactttcgc ggtcggaggg cggctctttt
      661 gaaacatcgc tttgcggtct gtcttttcgt tctcattagc tggttgttca tggtcggcaa
      721 aggcagcgcc ggcaatcatg aattttaccg cggcaagacc gtgcgcttgg tggtcggcta
      781 cgcgccgggc ggcggctatg atttctatgc ccgcgcggtg gcgcgttaca tgggtaagca
      841 tgtccccggc aacccggcgt tcgtcgtcga caacatgccg ggggccggca gtctggcgtc
      901 cgccaatcat ctttatcgga tcgccaaagc ggacggcttg accctcggcc acttcagcgg
      961 ctcgctattt ccgcttcaag ccatggggca gaaagagatt agcttcgacg cggcgcggtt
     1021 tgagtatgtc ggcgcagtgg ccaaggtcga gatcgtttgc ggctttccca aggccggggg
     1081 tatcgatagc gtggacaaat ggctggcggc caagacgccg ccccgtttgg gcggcacggc
     1141 gcctggcacc ggcggccatg acacgacgag gctgctcgca gcgaccatcg gcgcgccggc
     1201 gcagttggtg ttgggttaca agagcaccgg cgacatgcgt ctggcgattg agcgcggcga
     1261 gttgaccggg ctatgcaccg gctgggaaag ctttcgctcg ctgtggaaga aacaaatcga
     1321 cagcggcgag tttgtcatca ttctccaagc cctcgcgaag ccccacccgg agttgcccaa
     1381 ggtgcctctg gccgtgacct acgccaagaa cgacgaagcg cgccagctct tgcaagtcgg
     1441 tgcccatgat ctcgcatccc tcgccaggcc cttcgtcatg gcgccgggca cgccgaaaga
     1501 gcgggtggag atttttcgca aagccttcac cgcaaccatg agcgatcctt gctttctggc
     1561 cgacgccgaa cgggccaacc tcgaca
//
LOCUS       DATIRS010000072         1881 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_497487, whole genome shotgun sequence.
ACCESSION   DATIRS010000072 DATIRS010000000
VERSION     DATIRS010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1881)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1881)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1881
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_497487"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..524)
                     /locus_tag="VLM90_00895"
     CDS             complement(<1..524)
                     /locus_tag="VLM90_00895"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ11537.1"
                     /translation="MKTQWNSFRLRLGCFTLLGLVVSLLTLPLPVRAERIAIATPSRG
                     LFEFPVVVAMRKGFFKSEGLDVDKIQMQPAIGVKALISGDVDYLLAWGSALRAAVTGV
                     PIKAVVGLASRPLHVLIARQDIKTPKDLKGKVIGVDSVAGTVDYLSRVAVRHFGFEPE
                     KDVKIIVTGESPTRL"
     gene            complement(538..1362)
                     /locus_tag="VLM90_00900"
     CDS             complement(538..1362)
                     /locus_tag="VLM90_00900"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HSQ11538.1"
                     /translation="MAAKKSAGITATIVKYGGGVSAVRALPKAKGRRPAVIILHERYG
                     IDQHTKDLTVRLAQAGFVGLAPDLFHRYTGDRKAVLSGAQRVDLTDDGALEDLNGAVE
                     YLKKLKEVDPARIGIIGVCQTGRQPLLLAAKRNDIAGAVVLYGAIGGKEWMGNNLRPT
                     PIEELVAQVTCPVLGIFGETDHIISIDDVVRLRNCFEKAKKNCHIRIYSDAPHGWLND
                     TMPGRYRKDAAKDAWILMMTFLKQCFAGGWNKDRIVCKYESDYSRKYNFTKNVRLE"
     gene            1498..1815
                     /locus_tag="VLM90_00905"
     CDS             1498..1815
                     /locus_tag="VLM90_00905"
                     /inference="COORDINATES: protein motif:HMM:NF016001.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase/quinone reductase family protein"
                     /protein_id="HSQ11539.1"
                     /translation="MNLKNGSNVVADLTTIGRKSGERRTVELRFLHFNGNFYATSSKI
                     QGKHWCQNMIKNPVVDISVKGEKLSCMATQVTNEALRKQILTLRDSPPQLDRVVFEIR
                     PRN"
BASE COUNT          387 a          565 c          522 g          407 t
ORIGIN      
        1 aggcgcgtcg gactctcgcc ggtaacgatg atctttacgt ctttctcagg ctcgaagccg
       61 aagtggcgga cggccacgcg cgacagatag tcgactgtgc cggcaaccga atcgacgccg
      121 atcactttgc ctttgaggtc cttcggcgtc ttgatgtcct ggcgggcgat gagcacgtgc
      181 agcggccggc tggcgaggcc caccacggcc ttgatcggca cgccggtcac cgcggcacgc
      241 agggccgatc cccacgcaag cagatagtcc acgtcgccgg agatcaaagc tttgacgccg
      301 atggccggct gcatctgaat cttatcgacg tctaagcctt cgctcttgaa gaaacctttg
      361 cgcatcgcga ccaccacggg aaattcaaag agtccgcggc tcggcgtcgc gatagcgatg
      421 cgttccgcgc gcaccggcaa cggcagggtg aggagcgaaa ccacgagccc caagagagtg
      481 aaacagccga gtcgaagccg aaaggagttc cactgcgttt tcatggcgat cgctccttca
      541 ttccaaccga acgttcttgg taaagttgta cttcctcgag tagtcgcttt cgtacttgca
      601 gacgatccgg tccttgttcc agccgccggc gaagcattgt ttcaaaaacg tcatcatcag
      661 gatccaggca tctttcgcgg cgtctttgcg gtagcgtccc ggcatggtgt cgttgagcca
      721 gccgtgcggc gcgtcggagt agatgcgtat gtggcaattc tttttcgctt tctcgaaaca
      781 attgcgcagg cgcaccacgt cgtcgatgga gatgatatga tcggtttcgc cgaagatgcc
      841 caacaccggg caagtcactt gcgcaaccag ctcttcgatg ggtgtcgggc gcagattgtt
      901 gcccatccac tccttgccgc cgatggcgcc gtaaagcacg accgccccgg cgatgtcgtt
      961 gcgcttcgcc gcaagcaaaa gcggctggcg cccggtttgg cagacgccga tgatgccgat
     1021 gcgcgcggga tccacttcct taagtttctt tagatactcc acggcgccgt tcaggtcttc
     1081 cagcgcgccg tcgtcggtga ggtcaacccg ctgcgcgccg ctcaagaccg ctttgcgatc
     1141 accggtatat cgatgaaaca agtccggcgc caggccgacg aagccggctt gcgccaatct
     1201 taccgtgaga tctttcgtat gctggtcgat gccgtaacgc tcgtggagaa taatgaccgc
     1261 cggacgtctg cctttggctt tgggcaaagc gcgtaccgca ctgacgccgc cgccgtactt
     1321 cactatcgtt gcagtgattc ccgcggactt cttcgctgcc atcgttgcct ccgagcggat
     1381 tcaaatcgcc tagatttgtt tgtcaaattt cgccaagctt atccccgcct ccgcgaacta
     1441 gtcaaggcgg cggcattcaa cttgtcacgg ctcgttcgga aacgtatatt caccgccatg
     1501 aacctaaaaa acgggtcgaa cgtagtcgcc gatctcacta cgattgggcg aaaatccggc
     1561 gagcggcgca cagtggaatt gcgctttctt catttcaacg gaaattttta tgccacgtcc
     1621 agcaagattc aaggcaagca ctggtgtcag aacatgatca agaatcccgt cgtcgatatt
     1681 agcgtcaaag gcgagaaact gtcgtgcatg gccacgcaag taacgaacga agctcttagg
     1741 aagcagatcc tgaccttgcg cgactcaccg ccgcagctcg accgagtggt gttcgagatc
     1801 aggccgcgca attagaccca gcgtcggctg gcaaaactca aggaatccaa tttttacttc
     1861 ttcgtcgctt ccttctcctc g
//
LOCUS       DATIRS010000073         2218 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1186004, whole genome shotgun sequence.
ACCESSION   DATIRS010000073 DATIRS010000000
VERSION     DATIRS010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2218)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2218)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2218
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1186004"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..208)
                     /locus_tag="VLM90_00910"
     CDS             complement(<1..208)
                     /locus_tag="VLM90_00910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11540.1"
                     /translation="MLKVIPVEEAVGLPLAHDITEIIPGKHKGPAFRRGHIIRPEDVS
                     KLLDVGKANIYVMNLEPDELHEEDA"
     gene            305..1468
                     /gene="chrA"
                     /locus_tag="VLM90_00915"
     CDS             305..1468
                     /gene="chrA"
                     /locus_tag="VLM90_00915"
                     /inference="COORDINATES: protein motif:HMM:TIGR00937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate efflux transporter"
                     /protein_id="HSQ11541.1"
                     /translation="MTLAELVRYFLYLGAFGFGGPVALVGFMHRDLVEKRGSITEDTY
                     KLSLALAQIMPGPLAAQVAIAIGYFEAGIAGATLAGIAFVLPSFLMVVGISLVYVAYG
                     GLWWMQALFYAIGATVIAIIAIAAYKLARSTNKRDPLLWGIFAVLTAVTLWAQAELAE
                     FFILAGLVVLVVKAWPGAKQGSLMVFGGVVLGLLIWLLEAWLRQTGSAADSGNMLVQI
                     LLFFTKAGAFVFGSGLAIIPFLQQGVVEQFHWLTDHHFLDAVAVAMITPGPVVITVAF
                     IGFIVAGFAGAVMAAIGIFLPVYIFTIVPAPWFKRHRDNPQLKAFVDGATAAATGAIT
                     GAVLVLGARAIKDVPTALIAIVSLAILWRYKIPEPVIVSVAGMVGLILYPILH"
     gene            1480..1920
                     /locus_tag="VLM90_00920"
     CDS             1480..1920
                     /locus_tag="VLM90_00920"
                     /inference="COORDINATES: protein motif:HMM:NF021357.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromate resistance protein ChrB
                     domain-containing protein"
                     /protein_id="HSQ11542.1"
                     /translation="MKWVTRKQIRVNRVATAWLIRRFIDRQAEFIFVEPADVAEVQKR
                     EKAQGFDAPGATYPHKDSQGRCSFEALVSEYCSSDAVLKEMARMVRGADFADESHLTE
                     ESVGIRTISQGFPLVTNDDHETVEKASFLYDALYASIKAQQPSN"
     gene            complement(1955..>2218)
                     /locus_tag="VLM90_00925"
     CDS             complement(1955..>2218)
                     /locus_tag="VLM90_00925"
                     /inference="COORDINATES: protein motif:HMM:NF015436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter associated domain-containing
                     protein"
                     /protein_id="HSQ11543.1"
                     /translation="VETLPGEKRDAFQTLGGFIFTQMGRVPAVAESFEWRGLRFEIVD
                     MDGKRIDKVLVLSKDAVDFVNAAPESASQSQPKTPSGIGNQTP"
BASE COUNT          409 a          669 c          610 g          530 t
ORIGIN      
        1 ccgcatcttc ttcgtgcagt tcatccggct ccaaattcat gacgtaaatg ttggccttgc
       61 cgacatccaa aagtttcgag acgtcttccg gacgaatgat atggccgcgc cgaaacgccg
      121 gccctttatg tttgccggga atgatttcgg taatgtcgtg cgccagcggc aaaccgaccg
      181 cttcttcgac ggggatgact ttgagcatgt gaatgactcc tcgctaatat ctctagtaaa
      241 tccgcggtga tttttccacc agggactggt cttgtccgga cagcctgtgc tattagccgg
      301 gggcatgacg cttgctgaac tggtccgcta ctttctctac ctcggcgcct ttggcttcgg
      361 tggcccagtc gcattggtcg gtttcatgca ccgcgatcta gtcgagaaac gaggatccat
      421 caccgaagat acctacaagc tgtccttggc gctcgcccag atcatgcccg gacctttggc
      481 cgcgcaagtc gccatagcca tcggttattt cgaggccggc atcgccggtg cgaccttggc
      541 tggaatcgcc ttcgttttgc cttcgtttct aatggtggtc ggcatctcgc tggtttacgt
      601 cgcctacggc gggctctggt ggatgcaggc gctgttctat gcgatcggcg cgacggtcat
      661 tgcgatcatc gccatcgcgg catacaagct cgcccgcagc acgaacaagc gcgatccgct
      721 gctctgggga atctttgccg tacttaccgc ggtcactcta tgggcccagg cggaactggc
      781 ggagtttttt attctcgccg gcctcgtcgt tctcgttgtc aaggcttggc caggagcgaa
      841 gcaaggatcc cttatggttt tcggcggagt cgtgctcggc ttgctcattt ggctgctcga
      901 agcatggctg cgccaaaccg gttcggcagc cgattccggc aacatgctcg tgcaaattct
      961 tttgttcttc accaaagccg gtgcttttgt ctttggcagt ggtctagcga tcattccgtt
     1021 cttgcagcaa ggcgtcgtcg agcaattcca ctggttgacc gatcatcatt tcctcgacgc
     1081 cgtcgccgtg gcgatgatca cgcccggacc tgtcgtcatt accgtcgcgt tcatcggctt
     1141 tatcgttgcc ggcttcgcgg gagcggtgat ggccgccatc ggcatctttc tgccggttta
     1201 tatcttcacc atcgttcctg ccccctggtt taaacgccac cgcgacaacc cgcaactcaa
     1261 agcgtttgtc gacggcgcca ccgccgcggc caccggcgcc atcactggcg cggttttggt
     1321 gctcggcgct cgggcgatta aagacgtacc cacagcgctg atcgccatcg tcagcttggc
     1381 gatcctttgg cgctacaaaa tccccgagcc ggtcattgtt tcagtcgccg gtatggtcgg
     1441 tttaattctt tatccgattc ttcattgaga gagggtcgca tgaagtgggt cacgcgcaaa
     1501 cagattcgtg tcaaccgggt cgccaccgcc tggctgatcc gccggttcat cgaccgccag
     1561 gccgaattta tcttcgttga gccggcggac gttgccgaag tacaaaaacg tgaaaaggcc
     1621 caaggcttcg atgcccccgg cgcgacctat ccgcataaag acagtcaggg ccgctgctcc
     1681 ttcgaagccc tggttagcga atactgttcg agcgatgccg tgctcaagga aatggcgcgc
     1741 atggtgcgcg gcgccgactt tgccgatgaa tctcacttga ccgaagaatc ggtgggaatt
     1801 cgcacgatct cccaaggctt tccgctggtc accaacgacg atcacgagac cgtcgaaaaa
     1861 gcatcttttc tctacgacgc cctctatgcg tcgatcaaag cacagcaacc gagcaactag
     1921 cagattgcta gacacagaat cgccggagcg gcgatcacgg tgtctgatta ccgatcccgc
     1981 tcggtgtttt tggctgggat tgcgacgcgc tttccggcgc agcatttacg aagtcgacag
     2041 cgtccttgga cagcaccagc actttgtcga tgcgcttgcc gtccatgtcg acgatctcga
     2101 agcgtaatcc ccgccattcg aaggactctg ccaccgctgg gacgcggccc atctgggtga
     2161 aaataaaacc gcccaaggtc tggaacgcat cgcgcttttc ccccggcagg gtctcgac
//
LOCUS       DATIRS010000074         1807 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_497622, whole genome shotgun sequence.
ACCESSION   DATIRS010000074 DATIRS010000000
VERSION     DATIRS010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1807)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1807)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1807
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_497622"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            226..1335
                     /locus_tag="VLM90_00930"
     CDS             226..1335
                     /locus_tag="VLM90_00930"
                     /inference="COORDINATES: protein motif:HMM:TIGR02818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004024 - alcohol dehydrogenase activity,
                     zinc-dependent [Evidence IEA];
                     GO_function: GO:0051903 - S-(hydroxymethyl)glutathione
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006113 - fermentation [Evidence IEA];
                     GO_process: GO:0009404 - toxin metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-(hydroxymethyl)glutathione dehydrogenase/class
                     III alcohol dehydrogenase"
                     /protein_id="HSQ11544.1"
                     /translation="MKSRAAVAWEAGKPLIIEEVEVGAPKQGEALLKIAATGVCHTDA
                     YTLSGKDPEGLFPAIMGHEGGATVLEVGAGVTSVKPGDHVIPLYIPECGACKFCLSGR
                     TNLCGAIRLTQGKGVMPDGSSRFSLGGKTILHYMGTSTFSEYTVLPEIALAKINPAAP
                     LDKVCLLGCGITTGIGAVLNTAKVRPGSTAAVFGLGGIGLSVIQGLVMAKAERIIAVD
                     MNEKKFEMAKNLGATDFIVPEPDGTPVQQAIIDMTDGGVDYSFECIGNVNTMRAALEC
                     CHKGWGESTIIGVAAAGQEIATRPFQLVTGRVWRGTAFGGVKGRSQLPGYVERYLNGE
                     IKVDPMITHVLPLERINDAFDLMHEGKSIRSVIKF"
     gene            1559..>1807
                     /locus_tag="VLM90_00935"
     CDS             1559..>1807
                     /locus_tag="VLM90_00935"
                     /inference="COORDINATES: protein motif:HMM:NF012339.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HSQ11545.1"
                     /translation="MNKKIKFRVNGKRHEVEVPTNRMLIDCLRYDLGLTGTKEGCSVG
                     VCGACTVLMDGDMISSCLTLAVMADGHELTTVEGLAKNG"
BASE COUNT          409 a          510 c          523 g          365 t
ORIGIN      
        1 tattcgtcat ccctggtttc aacacataag ttctcatctc aagaaacata gcgccacctc
       61 caataattag tccctactct ttcccacaaa tggtgcaagt attgcaaccg tgcgtcaacc
      121 gttttcatgg catcacgaat ctgctaagag gcttagggta caccatcaca gggaacatct
      181 tgcagcggag taccgcttcg cctgcattgt aactcaggag gtcctatgaa atcgcgcgcg
      241 gccgtcgcct gggaagccgg caaaccgttg atcattgaag aagtcgaagt cggggcgccg
      301 aaacagggcg aggcgctgct caagatcgcc gccaccggtg tctgccacac cgatgcctac
      361 acgctttccg gcaaagatcc cgaaggattg tttccggcga tcatgggcca tgaaggcggc
      421 gccacggtgc tggaagtcgg cgccggcgtg accagcgtta agcccggcga ccatgtgatt
      481 ccgctgtaca ttcccgagtg tggcgcgtgt aaattttgcc tgtcgggacg gaccaatctt
      541 tgcggcgcca tcaggctgac gcaaggcaaa ggcgtcatgc ccgacggctc ctcgcggttc
      601 tctttgggcg gcaaaaccat cctgcactac atgggcacct cgacgttttc ggaatacacc
      661 gtgctgccgg agatcgcctt ggcgaaaatc aatccggcgg cgcccctcga caaagtctgc
      721 ctgctcggct gcggtatcac gaccggaatc ggcgcggtgt taaacacggc taaagtgcgg
      781 ccgggctcca cagccgccgt cttcggcctc ggcggcatcg gtctcagcgt catccaagga
      841 ctggtgatgg ccaaggccga gagaatcatc gccgtcgaca tgaacgaaaa gaagttcgag
      901 atggcgaaaa atttgggcgc caccgatttc atcgtgcccg agccggatgg cacgccggtg
      961 cagcaggcga ttatcgacat gaccgacggc ggcgtcgatt attcattcga atgcatcggt
     1021 aatgtgaaca ccatgcgcgc ggcgctggag tgctgccata aaggttgggg cgaatcgacc
     1081 atcatcggcg tcgccgcggc gggccaagag atcgccaccc ggccgtttca actggtcacc
     1141 ggacgggtgt ggcgcggcac cgccttcggc ggcgtcaaag gccgctcgca actacccggt
     1201 tatgtcgagc gctatttgaa cggcgagatc aaagtcgatc cgatgatcac ccatgtttta
     1261 ccgctcgaac ggatcaatga cgccttcgat ttgatgcatg aaggcaaaag catccgctcg
     1321 gtgatcaagt tttagtccca tcacggcttg cgtaagcaca aaacgttgga gttggggcgc
     1381 cgccgcgata gtaaatccag cgacgccgat tggcggccgt caagcgatcg tttcccagga
     1441 gaatttgccg ggaaaatggc ttgcagtttg aaaaatttct cactataaga aggccctagt
     1501 ggttttttcc agcctgtgct gaaaactccg cgcaacagac tctgagaaag gaacagcgat
     1561 gaataagaag atcaaatttc gcgttaacgg caaacgacat gaggtcgagg tcccgactaa
     1621 tcgtatgtta atcgactgtt tgcgctacga tctcgggctg accggcacca aggaagggtg
     1681 cagcgtcggc gtctgcggcg cctgcaccgt gctgatggac ggagacatga tcagctcctg
     1741 cctgacgtta gcagtcatgg ccgacggcca tgaactcacc acggttgagg gtctggcgaa
     1801 aaatggc
//
LOCUS       DATIRS010000075         1804 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1874218, whole genome shotgun sequence.
ACCESSION   DATIRS010000075 DATIRS010000000
VERSION     DATIRS010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1804)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1804)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1804
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1874218"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..777)
                     /locus_tag="VLM90_00940"
     CDS             complement(<1..777)
                     /locus_tag="VLM90_00940"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ11546.1"
                     /translation="MIGRALLAVVIAALLAAPVDARAADKFTTIYSARVMAQALPWIA
                     EEAGLFKKYNLDHSLVFIASSSIVTAALLGGDPDMTMTGGVGNVIAFVRGSTDIAYVG
                     SAKNLMTQNIIAGGNLKRPEDLKGKRIAVSRIGSNSHYFTIQALRRHNLEPNRDYTFL
                     QSGGDPESLIALLAGGVEVACLTPPTDVQALSRGYHYVIYGPILRYPMPPRPLSPNAR
                     PLPGGPSRWRSICGRWVRHRRSCTASVNSFTKSWPSSCAST"
     gene            complement(774..1772)
                     /locus_tag="VLM90_00945"
     CDS             complement(774..1772)
                     /locus_tag="VLM90_00945"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ11547.1"
                     /translation="MANVKTLAALFLVIGSAGHTFAAAAPDKLVGIHSSRVMSQSFPW
                     VAHEAGLFKKYNLDFNLVFISSSSIVAAALLGGDAEMTVTGGIGNVAAYVKGTTDVVF
                     TGGVKNVMTQTLIAGGNIKKPEDLRGKRIGVSRIGGNSHYFTIQALRRHKMEPNRDYS
                     FLQTGGDPETLAALFSGALEVANLTPPSDAMAIAKGYHYVIYGPDLKIPYSATAFVTK
                     RSVIAKRPVVIGNFMRAMAEASKLVHTDREIFYKVLGKYLRIQDRAVLESAYNAEIKA
                     LEPRLTIKLESLQAILDELAATDPRAKNVKPAEMVDSRYLDEMNKSGFMDQLWSKK"
BASE COUNT          377 a          519 c          520 g          388 t
ORIGIN      
        1 cgtcgatgcg caactgcttg gccaagactt tgtaaacgaa ttcacgctcg ctgtgcatga
       61 tcttcgatgc ctcacccatc gcccgcatat actgcgccat cggctggggc ctccgggcaa
      121 tggtcgagcg tttggtgaca aaggacgtgg cggcataggg tatcttaaga tcgggccata
      181 gatgacataa tgatagccgc gcgaaagcgc ctgcacgtct gtcggcggtg ttaaacaggc
      241 gacttcgacg ccgccggcga gcaacgcaat aagcgactcg gggtcgccgc ccgattgcag
      301 aaaagtgtaa tcgcggttgg gctccagatt gtgacggcgc aatgcttgaa tggtaaagta
      361 atgtgagttg ctgccgatgc ggctcactgc gatccgtttg cctttcagat cctcgggccg
      421 tttcagattg ccgccggcga tgatgttctg cgtcatcaga ttctttgcgc tgccgacata
      481 ggcgatgtcc gtcgagccgc gcacgaatgc gatgacgttg ccgaccccgc cggtcatggt
      541 catgtcgggg tcgccgccga gcagtgcggc ggtgacgatg ctcgacgacg cgatgaaaac
      601 gagactgtga tcaagattgt atttcttgaa tagcccggcc tcctcggcga tccacggcag
      661 cgcttgggcc atcacccgcg ccgaatagat ggttgtaaac ttgtccgctg cgcgggcatc
      721 aaccggcgcc gccaagagcg ccgctatcac aaccgccagc agcgcgcgcc cgatcatttt
      781 ttgctccaca gttgatccat aaaaccgctc ttgttcattt cgtcaagata gcggctatcc
      841 accatctccg ccggtttgac gttcttggcg cgaggatcgg tagccgccaa ttcgtcaagg
      901 atcgcctgca aggattccag tttgatcgtc aagcgcggct ccaacgcctt gatttcagca
      961 ttgtacgccg actcgagcac ggcgcggtcc tggatgcgca gatatttgcc caatactttg
     1021 tagaaaatct cgcggtcggt atgcaccagc ttggaggctt ccgccatcgc ccgcatgaag
     1081 ttgccgatca ccaccggccg cttggcgatc accgagcgct tggtcacgaa cgccgtcgcc
     1141 gaatagggaa tcttcaaatc cggaccgtaa atcacatagt ggtacccctt ggcgatcgcc
     1201 atagcatcgc tggggggggt caagttggcg acttccaatg cgccgctgaa cagagctgcc
     1261 agggtttcag gatcgccgcc ggtctggaga aaactatagt cgcgattggg ctccatcttg
     1321 tgccggcgca atgcctggat ggtaaagtag tgcgagttgc cgccgatgcg gctgacaccg
     1381 atgcgtttgc cgcgaagatc ttcgggcttt ttgatattgc cgccggcgat cagggtttgc
     1441 gtcatgacgt ttttcacccc gccggtgaag accacatccg tcgttccttt gacataagcg
     1501 gcgacgttgc cgatgccgcc ggtgaccgtc atctcggcat cgccgccaag gagggctgcc
     1561 gcgacgatgc tggatgaaga aataaacacg agattgaaat cgagattgta tttcttgaac
     1621 aatcccgctt catgggccac ccagggaaag gactgggaca tgacgcggga agaatggatg
     1681 ccgaccaact tgtcgggcgc cgccgcggca aaagtatgac cggccgaccc aatcaccagg
     1741 aaaagcgctg cgagtgtctt aacgttagcc ataaagctcc tttacaaacc cactctcttc
     1801 taac
//
LOCUS       DATIRS010000076         1524 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_694723, whole genome shotgun sequence.
ACCESSION   DATIRS010000076 DATIRS010000000
VERSION     DATIRS010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1524
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_694723"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            396..>1524
                     /locus_tag="VLM90_00950"
     CDS             396..>1524
                     /locus_tag="VLM90_00950"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: protein motif:HMM:NF012389.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HSQ11548.1"
                     /translation="MTILRMTDIDLRGKRVFIRADLNVPQDDAGKITDDTRIRASVPA
                     IRHALDAGAAVMVTSHLGRPTEGELKPEDSLAPVAKRLSELLGTPVPLRTNWVDGVDV
                     KAGEVVLLENCRVNKGEKKNDETLARKMAALCDVYVNDAFGTAHRAEATTHGMARFAP
                     VACAGPLMAAELDALGKALTAPKRPLVAIVAGSKVSTKLSILGELAKKVDHLIVGGGI
                     ANTFLLAEGLPVGKSLVEADLVGEANSISETIKAKGGVVPIPVDVVCAKEFSAQAKAT
                     VKDAGDVAADDLILDIGPKTASKFADALRKAGTIVWNGPVGVFEFSQFGEGTKTIAHA
                     IAASTAFSLAGGGDTVAAIAKYGIEKKIGYISTGGGAFLEFL"
BASE COUNT          324 a          422 c          502 g          276 t
ORIGIN      
        1 agcaagcggc gggagccaca attccaaagc ttcagcaatc ggatgctgga tgttacggta
       61 gcacttgcga atgcgaaatg ataaccgtac gtattgccca ctcgttgcgg cggacgctaa
      121 tctggcgcgg caatgcgcca ggttaagcgc gcacaggaag cggcgggagc cacaacgaac
      181 ggggattttc caatcgcatg ctcgacacca cagtcgcact gatgaaggct aagtgagccg
      241 atcggggcat gatccattcg ttgtgttgat gaacgcgaag caggcagaaa tattggctgc
      301 ggcgcgcact tcaaaagcag agactgggtg tttcgcgcgc cgttgtctct attccctccg
      361 tatttcttgt ggcggaaagg cgttgacttg aaaccatgac gatcctgcgc atgaccgata
      421 tcgatctgcg cggcaagcgc gttttcattc gcgccgatct gaacgtgccg caggacgatg
      481 ccggcaaaat taccgacgac acccgcatcc gtgcctcggt gccggcgatc aggcacgcgc
      541 tggacgccgg ggccgcggtg atggtgactt cacatcttgg ccggcctacc gagggcgaac
      601 taaagccgga ggattcgctg gcgccggtgg caaaacgatt gtcggaactg ctgggcacgc
      661 cggtcccgct taggacgaac tgggtcgatg gcgtggatgt gaaggctggc gaagtggtgc
      721 tgctggaaaa ttgccgggtc aacaagggcg agaagaagaa cgacgagact ctggctagaa
      781 aaatggccgc actgtgcgac gtttacgtga atgacgcatt cggcaccgcg catcgcgccg
      841 aagcgacgac ccacggcatg gccaggtttg caccggtcgc ctgcgccggc ccgctgatgg
      901 cagcagagct cgacgcgttg ggtaaggcgc tgaccgcacc gaaacggccg ttggtcgcaa
      961 ttgttgccgg ctccaaggtc tccaccaaac tcagcatcct tggcgagctg gcaaaaaaag
     1021 tggatcacct gatcgtgggc ggtggcatcg ccaatacttt cttgctggcg gagggccttc
     1081 cggtcggcaa gtcactggtc gaggccgatc tggtcggcga ggcaaacagc atcagcgaaa
     1141 cgatcaaggc gaagggcggg gtcgtgccga tcccggtgga cgtggtgtgc gccaaagagt
     1201 tttccgcgca ggccaaggct acggtgaagg acgcgggcga tgtggcggct gacgacctga
     1261 ttctcgacat cggcccaaag accgccagca agttcgccga tgcgctacgc aaggcaggca
     1321 ccatcgtctg gaacggcccg gtgggcgtgt tcgagttcag ccagttcggc gaggggacga
     1381 aaaccattgc gcatgcgatc gcggcttcca cggcattttc gctcgccgga ggcggcgaca
     1441 cggttgcggc gattgccaaa tacgggatcg aaaagaaaat cggctacatt tccaccggcg
     1501 gcggtgcgtt cctggagttc ctgg
//
LOCUS       DATIRS010000077         1530 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_203034, whole genome shotgun sequence.
ACCESSION   DATIRS010000077 DATIRS010000000
VERSION     DATIRS010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1530
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203034"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(155..649)
                     /gene="coaD"
                     /locus_tag="VLM90_00955"
     CDS             complement(155..649)
                     /gene="coaD"
                     /locus_tag="VLM90_00955"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HSQ11549.1"
                     /translation="MANNDVAIYPGSFDPITNGHVDLVNRTLRVFDKVVVAIASNPDK
                     DRSLFTVQERLQLIEEVFAGTDGRVKAVSFQGLLVDYAERQGAKVVIRGLRAISDFEY
                     EFQMAMMNHRLKPKLETFFMMTGESEFYTSSRLVKEVVSLGGNVAGLVPDNVLKKLQE
                     KFKV"
     gene            complement(661..1233)
                     /gene="rsmD"
                     /locus_tag="VLM90_00960"
     CDS             complement(661..1233)
                     /gene="rsmD"
                     /locus_tag="VLM90_00960"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: protein motif:HMM:TIGR00095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052913 - 16S rRNA
                     (guanine(966)-N(2))-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HSQ11550.1"
                     /translation="MKVIGGTARGRKLIVPKGLTVRPTAARVKESLFNILPHDFSGLR
                     VLDLYAGSGNVSIEALSRGAVEAVLVDESARSAAVIRANLTRLELLQRAQVWIVPVAR
                     ALRKLDKAGEKFDLIFLDPPYERGLVKTTLEAIGQCALLNPAAIVVVEHSGREAVRRE
                     YGGLILNDQRRYGDTLLSFFDKSQAMNTTA"
     gene            complement(1249..>1530)
                     /locus_tag="VLM90_00965"
     CDS             complement(1249..>1530)
                     /locus_tag="VLM90_00965"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HSQ11551.1"
                     /translation="ALARGGRLVTCGASAGAQPATDLRRIFWHHLKVFGSSFGSRDEL
                     RQVLNFLESSGTKSIIDTVFPLAQAAMAQQRLAAGRHFGKIILDIDGKG"
BASE COUNT          318 a          449 c          433 g          330 t
ORIGIN      
        1 gctccggcgt gtcgaagtcc ggttcaccgg cggagaaatt aatgacgtca atcccgtccg
       61 cgcgcagttt gccggcgttg gcggcgatcg ccagagtcac cgagggtttg atcagtttgg
      121 ttcgctctgc cagaacagtc atggcgcaaa atccttagac tttaaatttc tcttggagtt
      181 ttttgaggac attgtcgggc accagaccgg ccacgttgcc gccgagactg acaacttctt
      241 tgacgagccg cgagctggtg taaaattccg actcgccggt catcatgaaa aaggtttcca
      301 gcttgggctt gagccggtgg ttcatcatcg ccatttgaaa ttcatattca aagtcggaga
      361 tcgcgcgcaa accgcggatc accaccttcg cgccttgacg ctccgcgtag tcgaccaata
      421 gcccttgaaa cgacacggcc ttgacccggc cgtcggtgcc ggcgaacacc tcttcgatca
      481 actgcaagcg ctcttgaacc gtgaacagcg agcgatcttt gtcaggattg ctggcgatgg
      541 cgacgacgac tttgtcgaac acccgcaagg tgcgattgac cagatcgaca tgaccgttgg
      601 tgatcggatc gaaggagccg ggatagatag cgacatcgtt gttagccata gtgtgtgtcc
      661 ttacgcggtc gtattcatag cctgtgattt gtcgaagaat gacaacaaag tatcaccata
      721 acggcgttga tcattcaata tgagcccgcc gtattcgcgc ctgacggctt cccgtccgct
      781 gtgttcgacg acgacgatgg cggcggggtt gagcaaggcg cactggccga tggcttccag
      841 ggtcgtttta accaagcctc gttcataggg tgggtcgaga aatattagat cgaacttttc
      901 gccggccttg tcgagcttgc gcagcgcccg cgccaccgga acgatccaga cctgcgcccg
      961 ctggagcaat tccaacctgg tcaagttcgc gcggatcacc gccgccgagc gcgccgactc
     1021 atcgaccaat accgcttcga ccgcgccgcg gctgagcgct tcgatgctga cgttgccgct
     1081 gccggcgtag agatcgagca cccgcagacc ggagaaatca tggggcagaa tgttaaacag
     1141 cgactccttg acccgcgccg ccgtcggccg gaccgtcagt cctttgggta ctatgagctt
     1201 gcggccgcgc gccgttccgc cgatcacttt catggtcaaa gagttcgctc agcctttacc
     1261 atcaatatcc aagatgatct tgccgaaatg tcggcctgcc gccaaacgct gctgggccat
     1321 ggccgcttgt gccagcggaa atactgtgtc gatgatcgac ttggtaccgc tggattccag
     1381 gaagttaagc acctggcgca attcatcgcg gctgccgaaa gatgagccga agactttcaa
     1441 atgatgccaa aagattcgcc gcagatcggt cgccggttgc gctccggcgc tggcgccgca
     1501 agtcaccagc cgtcctcctc tggctaaagc
//
LOCUS       DATIRS010000078         2963 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1579618, whole genome shotgun sequence.
ACCESSION   DATIRS010000078 DATIRS010000000
VERSION     DATIRS010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2963)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2963)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2963
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1579618"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..463
                     /locus_tag="VLM90_00970"
     CDS             <1..463
                     /locus_tag="VLM90_00970"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSQ11552.1"
                     /translation="ATTEKPRTQKFSLRTPYMKQGRITQLVAETENMWIHTKINYEGG
                     ENEIHCHLDEDHSFIVLEGQMSVFDEKGGEIKVEKHQGVMIPKGAYYRYLNTGTENLV
                     VLRVGSGIKGKAQGGEEMRVRPDGKPLIASSEENKTVPPIEDTRFYADSAG"
     gene            542..1105
                     /locus_tag="VLM90_00975"
     CDS             542..1105
                     /locus_tag="VLM90_00975"
                     /inference="COORDINATES: protein motif:HMM:NF015438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HSQ11553.1"
                     /translation="MTQAIRPMPEEMPRELWRGYQPASSIWQGNVKEIFITPASAQAM
                     VAVPSVSAVADRGLEGDRFYRESWNAVKRSDKAVSLIEDEVLALAAKEIGVEAIGILT
                     RRNIVTRGVPLIELLGREFTVGNVRMRGIRLFEPCGHLVAVTKIPAIFKALEHRSGLK
                     AAVLSDGEIQIGDAVVLEPAVKIAAAI"
     gene            1319..2251
                     /locus_tag="VLM90_00980"
     CDS             1319..2251
                     /locus_tag="VLM90_00980"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HSQ11554.1"
                     /translation="MQYGLHLPASSATVKPEELVRFAQRAEALDFSLLTVADHVIVPT
                     HISVPYPYTVDGKYPGTGYHLETLMTMSYLAGATQRIRFATSVMILPYRNPVVTAKML
                     ASLDVLSGGRVIVGVGVGWMKEEFENLQTPNYEARGRVTDEYIRAFRELWTSDRPSFK
                     GQFVNFSDLIFLPKPVQKTIPIWIGGHSKSALKRAGQLGDGWHPIGGVPTIPLEPEDV
                     EKDLATMSEYAVKVGRDPKTIHVALKGSLFDKEKKIADRRRRFMGQAEEIAADIREYG
                     AAGVNTMIFDVRRPSSAETLERMEWMAKDVFPKV"
     gene            2274..>2963
                     /locus_tag="VLM90_00985"
     CDS             2274..>2963
                     /locus_tag="VLM90_00985"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSQ11555.1"
                     /translation="MNGMHLMGFALVAAALLGVDAGEGWLFLLMATAAQTSPRKFAGY
                     ADLPGVRLWYTDSGGNGVPLVLLHANTGNADGWQYNIPGFAAAGYRVIAFDRRGWGRS
                     AANPATGPQPGTIADDLHALAEYLKLDRFHLVGVAGGGFAAYDYVLWHPERLRSLVVA
                     ASGGAIVDEELSQIREKTALPNFRSWPPEFREVSMGYMATNPEGLKLWLKIHDNSIQQ
                     GVAAQPQRQTIT"
BASE COUNT          638 a          840 c          899 g          586 t
ORIGIN      
        1 agcaacaacc gagaaacccc ggacgcagaa gttttctctg cgcacgccct acatgaagca
       61 gggccgcatc acccagttgg tggcggaaac cgagaatatg tggattcaca ccaagatcaa
      121 ctacgaaggc ggtgagaatg agattcactg tcatctagac gaagatcatt cgtttatcgt
      181 gcttgaaggc cagatgagtg tcttcgacga aaagggcggc gaaatcaaag tcgagaagca
      241 tcagggtgtc atgatcccca agggcgccta ctaccgctac ctcaacaccg gcactgagaa
      301 tctggtcgtg ctgcgcgtcg gcagcggcat caagggcaag gctcagggcg gcgaagagat
      361 gcgcgtgcgt ccggacggca agccgttaat cgcttcctcc gaagagaaca agaccgtgcc
      421 gccgatcgaa gacacgcgtt tctacgcgga ttcggccgga tagtttttcg cttcgaccca
      481 cttatgtcag taaccgccgg ccactgagaa atcagtggcc ggcgtcgttt tgggaggtcc
      541 tatgacccag gcgattcgac cgatgcccga agaaatgccg cgcgagctct ggcgcggtta
      601 ccagccggcg agctcaatat ggcaggggaa tgtcaaagag atcttcatca cgcctgcttc
      661 agcgcaagcg atggtagccg tgcccagcgt aagcgcggtg gccgaccgcg gcctggaagg
      721 cgaccgattc tatcgtgaat cctggaacgc cgtgaagcgc tcggacaaag cggtgagctt
      781 gatcgaggat gaagtcttgg cgcttgccgc caaagagatc ggcgtcgagg cgatcggtat
      841 tctcacccgg cgcaacatcg tcacccgcgg cgtgccgctc atcgagctgc tcggccgtga
      901 gttcacggtc ggcaatgtgc gcatgcgcgg catccgcttg ttcgaacctt gcggccatct
      961 ggtcgccgtg acaaaaatac cagcgatctt caaggctctg gaacatcgca gcggtctcaa
     1021 agccgccgtg ctgagcgacg gcgagattca aatcggcgac gccgtcgtgc tagagccggc
     1081 cgtcaaaatc gccgcggcga tctagccgca taaggatgca aataaatcgg aatatttctc
     1141 gcaaaggcgc taaggcgcaa agggtggaga agaatgtcat ttcgaccgaa gggagaaatc
     1201 tttcttagat cctcgaatac actcgggatg actggcctga gcccttaact tagcggcttt
     1261 gcgcctttgc gagagaacga atcgattcca atcattcaag acaacgaggg aagattacat
     1321 gcagtacggc ttacatctgc cggcgtcgag cgcaacggtc aaacctgagg agctggttcg
     1381 tttcgcccag cgcgccgagg cgttggattt ttctttgctc acggtggccg atcacgtgat
     1441 cgtgccgact catatttccg tgccttatcc ctacaccgtc gacggcaagt atcccggcac
     1501 gggctatcat ctcgaaacct tgatgaccat gagttatctc gccggcgcga cccagcgcat
     1561 tcgcttcgcc accagcgtga tgatcttgcc ctatcgcaac ccggtcgtga ccgccaagat
     1621 gttggcgagt ttggacgtgc tttccggcgg ccgggtgatc gttggcgtcg gcgtcggttg
     1681 gatgaaagaa gagtttgaaa atttgcaaac gcccaattac gaagcgcgcg gccgggtcac
     1741 cgacgagtac atccgcgcct ttcgcgaatt atggaccagc gaccggccga gcttcaaagg
     1801 ccagttcgtc aactttagcg atttgatctt cttgcccaag ccggtgcaaa aaaccattcc
     1861 catctggatc ggtggccata gcaaatcggc gctaaagcgc gccggccagt tgggtgacgg
     1921 ctggcatccc atcggcggtg tgccgacgat tcccctcgaa ccggaagatg tcgagaaaga
     1981 tttggcgacc atgagtgagt atgccgtcaa agtcggccgc gacccgaaaa ccattcatgt
     2041 ggctctcaaa ggctcgctct tcgataaaga gaaaaaaatc gccgaccgcc gccgccgttt
     2101 catgggtcaa gcggaagaga tcgccgccga tattcgcgaa tacggcgccg ctggtgttaa
     2161 caccatgatc ttcgacgtgc gccggccgag ctcggcggag accttggaac gcatggagtg
     2221 gatggcgaag gatgtttttc cgaaggttta gttggccatt taggagacac ttgatgaatg
     2281 gcatgcactt gatgggtttt gccctcgttg ccgcggcgct cctgggcgtg gacgcaggcg
     2341 agggatggtt gttcctgctg atggcaactg cggcacagac ttcgccgcgg aagttcgcag
     2401 gatacgccga tctgccgggc gtgcgcctgt ggtacaccga cagcggcggg aacggcgtgc
     2461 cactggtgct gctccacgct aacaccggca acgccgacgg ttggcagtac aacatcccag
     2521 gttttgccgc ggcgggatat cgggtcatcg ctttcgatcg gcgcggctgg ggccgcagcg
     2581 cggcgaatcc ggccactggt ccccagcccg gcaccattgc cgatgatttg cacgctcttg
     2641 cggaatatct caaactcgat cgatttcatc tcgtcggcgt ggccggcggc ggtttcgcgg
     2701 cttacgacta cgtgctctgg catccggagc ggctgcgtag tttggttgtc gccgccagcg
     2761 gcggcgccat cgtcgacgag gagttgagcc agattcgcga gaagacggcg ctgccgaatt
     2821 ttcgcagctg gccgccggag tttcgcgaag tcagcatggg ctacatggcg accaacccgg
     2881 aagggctcaa gctctggcta aagattcatg acaattcaat acagcagggc gtggcggcgc
     2941 aaccgcagcg ccagacgatc acg
//
LOCUS       DATIRS010000079         2009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_694915, whole genome shotgun sequence.
ACCESSION   DATIRS010000079 DATIRS010000000
VERSION     DATIRS010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2009
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_694915"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..491)
                     /locus_tag="VLM90_00990"
     CDS             complement(<1..491)
                     /locus_tag="VLM90_00990"
                     /inference="COORDINATES: protein motif:HMM:NF013112.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11556.1"
                     /translation="MPKKLFIQTYGCQMNQYDSEKIAQVLARQDYVRTDRIDGADVIL
                     LNTCSVRDKAEQKVYSALGSWKEFKNYRDGVIIGVGGCVAQQEGENLLKRVPHLDLVF
                     GTHNIHKLPEMIEQVENGRARPVDTAFYRDPAYMDDGELRTQVAGVKAFVTIMQGCNK
                     VCS"
     gene            complement(496..1902)
                     /locus_tag="VLM90_00995"
     CDS             complement(496..1902)
                     /locus_tag="VLM90_00995"
                     /inference="COORDINATES: protein motif:HMM:NF017569.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HSQ11557.1"
                     /translation="MQARVIEFANVLRRNGIRVSLSENMDAFRALELIGIADPQMFRN
                     ALRTTLIKRTSDQKPFDELFDYFFLGIGQALDAIDRKIMEELGLSPEKFQEMLEQIQK
                     LMKEMEGDLAHLTKALLNNNRAELERLLRQAMQQETQDGTPDSLRHTPYTRMMMRLGL
                     DRVQSEIERFRGMLQMLGENGEDLQNVMRYLDERMRDLNRLLREVIQQEQRKQGAEPR
                     DYSQRSALADKSFSFYTEDDIRRMNDAVARLAQRLKNRLSVRRKRAARGRFDVKATLR
                     KNMQYGGVPFLIQLDRRKKTKPQVMVLCDISDSVLNASRFMLQFVYSIQDLYAKVRSF
                     VFVAEIGEVTKLFEEHDIQTAVETALKGDVIDVFSHSNFGRAFEQFHRNFFASITSKT
                     TVLVIGDGRNNYNRPNEWVLREVKQKAKQLIWLNPESRMTWGIGDSEMPRYAPHCHIA
                     EECRSINQLYKIVDLIVP"
BASE COUNT          382 a          561 c          590 g          476 t
ORIGIN      
        1 aagctgcaga ctttgttgca gccctgcatg atcgtcacga aggccttgac gccggcgact
       61 tgagtgcgca gctcgccgtc gtccatatag gccggatcgc ggtaaaaagc ggtatccacc
      121 ggccgcgccc ggccgttttc cacctgttcg atcatctccg gcagcttgtg aatgttgtgc
      181 gtgccgaata ccaaatcgag atggggaacg cgcttcaaga gattttcacc ttcttgctgg
      241 gcgacgcaac cgccgacgcc gatgatgacg ccgtcgcggt agtttttgaa ttccttccag
      301 ctgccgaggg cgctgtaaac tttttgttcg gccttgtcgc gcacgctgca agtgttgagc
      361 aggatcacat ccgcgccatc gatacgatcg gttcggacat agtcttggcg cgccaggacc
      421 tgggcgattt tttccgaatc gtattggttc atctggcagc cgtaggtctg gataaaaagc
      481 tttttcggca taccgttagg gcacgatcaa atcgacgatc ttatagagtt gattgatgct
      541 gcggcactcc tcggcgatat ggcaatgggg cgcgtagcgc ggcatctcgc tgtcaccgat
      601 gccccaggtc atgcggcttt ccgggttgag ccagatcaac tgtttggcct tttgcttaac
      661 ttcgcgcagc acccattcgt tgggacggtt gtaattgttg cgcccgtcgc cgatcaccaa
      721 aacggtggtt ttgctggtga tcgaggcgaa aaaattgcgg tgaaactgct cgaaggcgcg
      781 gccgaagttc gaatgggaga aaacgtcgat gacatcccct ttcaaagcgg tctcgacggc
      841 agtctggatg tcatgttctt cgaagagctt ggtgacctcg ccgatctcgg cgacgaagac
      901 aaagctgcgc accttggcgt agagatcctg gatggaatag acgaactgca acatgaagcg
      961 cgaggcgttc aacaccgagt cggaaatatc gcacagcacc atcacctggg gcttggtctt
     1021 tttgcgccgg tcgagttgaa tcagaaacgg cacgccgccg tattgcatgt ttttacgcaa
     1081 ggtcgctttg acgtcgaagc ggccacgggc ggctcttttg cgccgcaccg ataggcggtt
     1141 tttcaagcgc tgcgccaggc gcgccacggc gtcgttcatg cgccggatat cgtcttcggt
     1201 gtagaaagaa aaactcttgt ccgccagcgc gctgcgctgg gagtaatccc gcggttcagc
     1261 tccctgtttg cgctgctcct gctggatcac ttcgcgcaac agccggttca agtcgcgcat
     1321 gcgctcgtct aaatagcgca tgacgttttg caggtcctcg ccgttctcgc cgagcatttg
     1381 cagcatgccg cggaagcgct cgatctcgct ctgcacccgg tcgagcccca gacgcatcat
     1441 catgcgcgtg tagggcgtgt ggcgcaggct gtccggcgtg ccgtcctgag tctcctgctg
     1501 catcgcttgg cgcagcaacc gctcaagctc ggcgcggtta ttgttgagca gcgccttggt
     1561 gagatgggct agatcccctt ccatctcctt catgagtttc tggatctgct cgagcatctc
     1621 ctgaaacttt tccggcgata gcccgagctc ttccatgatc ttgcggtcaa tggcatcgag
     1681 ggcctggccg atgcccagga aaaaataatc gaaaagttcg tcgaagggtt tctggtcgct
     1741 agtgcgtttg atcagagtgg tgcgcaaggc attgcgaaac atttgcgggt cggcgatgcc
     1801 gatcagttcc agcgcgcgga acgcgtccat gttttccgac aacgacacac ggatgccgtt
     1861 gcggcgtaaa acattggcga actcgataac ccgcgcttgc atagtcttgg tgaacgccgc
     1921 gcgctagcgg ctaatgcaga tgatccttat cgttgctggc gtcgggacgc cgggcttgct
     1981 tctcagctag atagctcttg agttcctgg
//
LOCUS       DATIRS010000080         1746 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_399936, whole genome shotgun sequence.
ACCESSION   DATIRS010000080 DATIRS010000000
VERSION     DATIRS010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_399936"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            106..1518
                     /locus_tag="VLM90_01000"
     CDS             106..1518
                     /locus_tag="VLM90_01000"
                     /inference="COORDINATES: protein motif:HMM:TIGR02037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HSQ11558.1"
                     /translation="MAAGVGISSSIERYQSGLQLAHAVERPSETSQTLAMPNFTGLAK
                     KAGPSVVNVSTTQVRKTAQQGSSPFGDQDPMGEFWERFFGGQMPRGAPQQRRSGLGSG
                     FIIDGNGTILTNYHVVDSAQKITVTLSDGKSYDAKVIGKDQKSDIAVIKIDAGRELPA
                     VTLGDSDRLEVGEWVMAIGNPFGLDHTVTSGIVSAKGRQIGAGPYDNFIQTDASINPG
                     NSGGPLLNLEGEVVGINTAIFSQSGGNIGIGFAIPTNSVKELLPQLRDKGRVVRGYLG
                     TTVQKITPEIADSMGLKQTRGALVADVMKGSPAEKSGVKAGDIIVEFDRKEVKDSSDL
                     PTQVARVAPGKTVPVRVLRDGKDVTLSLTVGELKDNEVAATVQEGDLGLSVQPVTPEL
                     AKRMDLDRSEGLVIASVKGGSAAEEAGLRSGDLITQVNRRPVKNLADYNREIAATEKG
                     KSVLFLVRRGQNSLFLALKR"
     gene            complement(1548..>1746)
                     /locus_tag="VLM90_01005"
     CDS             complement(1548..>1746)
                     /locus_tag="VLM90_01005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11559.1"
                     /translation="EHVEDGCFAGAAVADQPYFHTCDFSWPIDSAGINLAGKIAGIKG
                     GVWSGVVGLQKPITQRRACRR"
BASE COUNT          390 a          490 c          536 g          330 t
ORIGIN      
        1 gagtattgat ccacgatgat taaggagttc aagaaaatga taccagaatt aagtaaacat
       61 aaggcggtgg ggagacgatc cctcgtggtc ggaggcctgc tctgcatggc ggctggggtg
      121 ggcatcagca gcagcattga gcgatatcag tccggacttc aattggcgca cgcggtcgag
      181 cgtccgtcgg agaccagtca aaccctggcc atgccgaatt ttaccggcct agcaaagaaa
      241 gccggtcctt ccgtcgtgaa cgtttccacc acacaggtgc gcaaaaccgc tcagcaagga
      301 tcgtcgccgt ttggcgatca ggatccgatg ggcgagttct gggagagatt ctttggcggc
      361 cagatgccgc gcggcgcgcc gcaacagcgt cgatccgggc tcgggtcggg gtttatcatc
      421 gacggcaacg gcacgattct caccaactat cacgtcgtcg acagcgccca gaaaatcacc
      481 gtgacgctct cggatggcaa aagctacgac gccaaagtca tcggtaaaga tcaaaagtcc
      541 gacattgcgg taatcaaaat cgatgcgggg cgagagctgc cggcggtgac gctcggcgac
      601 tccgatcgct tggaggtcgg tgagtgggtg atggccatcg gtaatccgtt cggtctcgat
      661 cacaccgtca cttccggcat cgtcagcgcg aaaggacgcc aaatcggtgc cggaccctac
      721 gacaatttca ttcagaccga cgcctcgatc aatcctggta actcgggggg cccgctgctc
      781 aacctggagg gcgaagtggt aggcatcaac accgcgatct tcagccagtc aggcggcaac
      841 atcggcatcg gcttcgccat tccgaccaac tcggtgaaag aattgctgcc gcagttgcga
      901 gacaaaggcc gagtggtgcg cggttatctt ggcaccacgg tgcaaaagat cacgccggag
      961 atcgccgact cgatgggcct gaagcagact cgcggcgcct tggtggcgga cgtgatgaag
     1021 ggcagtccgg ccgagaaatc gggggtcaaa gcgggtgata tcatcgtcga gttcgaccgc
     1081 aaagaggtta aggattccag cgatctgccg acgcaagtgg cgcgcgtggc gccgggcaag
     1141 acggtgccgg tgcgggttct gcgcgacggc aaggacgtta ccttgtcgct caccgtcggt
     1201 gagttgaaag ataacgaagt cgccgctacg gttcaggagg gcgacttggg tctatcagtg
     1261 cagccggtaa cccccgagct agcaaagcgc atggatctcg atcgctccga aggtctagtc
     1321 atcgcttcgg taaaaggcgg cagcgccgca gaggaagcgg gactgcggtc cggcgacctg
     1381 attacccagg tcaatcgccg tccggtgaaa aatctcgccg actataaccg cgagatcgcc
     1441 gcgaccgaaa agggcaagtc ggtattgttt ctggtgcgcc gcggccagaa cagtctgttt
     1501 ctcgcgctca agcgctagtc ggtttcctgt cgcaacatcg tgatcgctca gcgtcggcat
     1561 gcccggcgct gagtgatcgg cttttgaagt cctaccacac cgctccacac accacctttt
     1621 attcccgcga tttttcctgc tagattgatg ccggctgaat cgataggcca ggagaagtca
     1681 caggtatgaa agtagggttg atcggccacc gcggcgccgg caaaacaacc atcttcaaca
     1741 tgctca
//
LOCUS       DATIRS010000081         2483 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1481480, whole genome shotgun sequence.
ACCESSION   DATIRS010000081 DATIRS010000000
VERSION     DATIRS010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2483
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1481480"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..199
                     /locus_tag="VLM90_01010"
     CDS             <1..199
                     /locus_tag="VLM90_01010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11560.1"
                     /translation="KQAGVADSTIELLIKRSGDALSAGVWRQDGWIVHSTPIREPQAN
                     AEASQAAYSMFVQPRVSVGRR"
     gene            complement(207..1064)
                     /locus_tag="VLM90_01015"
     CDS             complement(207..1064)
                     /locus_tag="VLM90_01015"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HSQ11561.1"
                     /translation="MIPGSFEYFAPRSLTDAVKVLADHRDDVKILSGGQSLLPLMKMR
                     LSKPAYIVDIGRIPGLDTISEDGNNLIIGALVTHEQIEYSDLLKVKCPLLPQTATTIA
                     DVQVRNRGTIGGSIAHADPAGDWPAAVIALDAEIRVFGPSGERWVKCDDFFLGLLMSV
                     LEPDEIVTGIKVPMTGNDKTAYQKAAPRSSGFAVTGVAVRLAVDSTGTCSRAAIGITG
                     VADKAYRPERTEQMLTGKKLDQKLIEEAAAESTRNVEVIEDINGSSEYRAHLTHVYVQ
                     RAIEEGLKR"
     gene            complement(1067..>2483)
                     /locus_tag="VLM90_01020"
     CDS             complement(1067..>2483)
                     /locus_tag="VLM90_01020"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSQ11562.1"
                     /translation="KTPAIYMEGNAVVTNKCPVIPNRGIGKPVMCFIWERMMDRVAQE
                     LNLSPIEVRRKNLIQANEMPYTTISGNVYDSGDYPGLLKALLEKIDYDKLRAEQKTAR
                     EQGKLIGIGIVIGVEPGGRNAARDMAIFPEMKEPPGSGGVNGAKIKLEKNGTLSLHLG
                     SPNCGQAHETTTAQVAADILGSTPDKFSTSIPFDSDLSSWGVAAANSGNNFHLYDIGA
                     IHGAASKLLEKILKLAAFNLKAEPSELAIEDSVVKVPGAAAKQITFAELGRIAYNNQH
                     LIPDDMEPGLEATFYYMFPHARPNIVPGADRRVRAQFTFSAGAHAAIVEVDKNTGSVH
                     VLRYLIVGDNGTVINPDVVNGQVYGSAAHGIAVALGEGFMYSPEGQPLTITYLDYGKC
                     STAETPRVEVVHQPSPSPFTPLGQKAAGEGAAIPSPAAIASAVEDALQPYGVKVCELP
                     ITPEAVWRLINQNPEKERRTF"
BASE COUNT          442 a          695 c          794 g          552 t
ORIGIN      
        1 caaacaagcg ggagtggcgg attcgaccat cgagctattg atcaagcgca gcggcgacgc
       61 gctctccgcc ggggtttggc ggcaagatgg ctggatcgtt cattcgacgc cgatccgcga
      121 gcctcaggca aacgcggagg cgagtcaggc tgcttattcg atgtttgtcc agcctagagt
      181 ttcagttggg cggcgctagg ccgcgcttag cgttttagcc cttcttcgat ggcccgttga
      241 acatagacat gggtcaagtg ggcacggtat tccgacgagc cgttgatatc ttcgatgact
      301 tcgacattgc gcgtcgattc agcagccgct tcctcgatca acttctggtc gagtttcttt
      361 ccagttagca tttgctctgt gcgctcgggc cggtaggctt tgtcggcgac accggtaatg
      421 ccgatggcgg cgcggctgca agtgccggta gaatcaaccg ccaagcgcac ggcgactccc
      481 gtaacggcga agccggaaga gcgtggcgcg gctttctgat aggcggtctt gtcgttgccg
      541 gtcatcggca ctttaattcc agtgacgatc tcgtccggtt ccagcacact cataagcaag
      601 ccgagaaaga agtcgtcaca cttgacccaa cgctcgccgc tcggaccgaa gacgcgaatc
      661 tcggcatcga gggcgatcac cgcagccggc caatcgccgg ccggatcggc gtgggcgatg
      721 ctgccgccga tggtgccgcg gttgcgcacc tgcacgtcgg cgatggtcgt ggcggtttgc
      781 ggcagcagcg ggcatttaac tttgagcagg tcggaatatt cgatctgttc gtgggtgacc
      841 agcgcgccga tgatgagatt gttgccgtct tcgctaatcg tatccaagcc ggggatgcgg
      901 ccgatgtcga caatgtaggc gggctttgac aagcgcatct tcatcagcgg cagcaagctc
      961 tgcccgccgg agagaatttt tacatcgtcg cgatgatccg ccaggacctt taccgcatcg
     1021 gtgagagaac ggggcgcaaa gtattcgaac gagccgggta tcatgactag aaagtcctcc
     1081 gctctttttc cggattttga ttgatcaagc gccataccgc ttcgggtgtg atcggcaact
     1141 cgcatacttt cacgccgtag ggctgcaagg catcctcgac ggcgctggcg atggcggcgg
     1201 gcgaggggat cgccgcgcct tcgccggcgg ccttttggcc aagcggcgtg aacggcgagg
     1261 gtgaaggctg gtggacgact tcgacgcgcg gcgtctcagc ggtcgagcat ttgccgtagt
     1321 cgagataagt aatcgtcaac ggctggcctt ccgggctgta catgaagcct tcgcccaggg
     1381 cgacggcgat gccgtgggcg gctgagccgt agacctggcc gttgacgaca tcgggattga
     1441 tcaccgtgcc gttgtcgccg acgattaaat agcgcagcac atgcaccgag ccggtgtttt
     1501 tgtcgacctc gacaatcgcc gcatgggcgc cggcggaaaa ggtgaactgc gcgcgtactc
     1561 tacgatcggc gccgggcacg atgttcggtc tggcatgggg aaacatgtag tagaaggtcg
     1621 cctcaagccc tggttccata tcgtcgggga tcagatgctg gttgttgtag gcgatgcggc
     1681 ccaactcggc gaaggtgatt tgcttcgccg ccgcgccggg gactttcacc acgctgtctt
     1741 caatcgccaa ttcggacggt tcggctttga gattgaaagc ggcgagcttg agaatcttct
     1801 cgagcagctt ggacgctgcg ccgtggatcg cgccgatgtc gtataagtgg aaattattgc
     1861 cgctattggc cgcggccacg ccccaggagg acagatcgct gtcgaagggg atgctggtgc
     1921 tgaacttatc cggtgtcgaa ccgaggatat cggcggcgac ttgggccgtc gtcgtctcgt
     1981 gcgcctgacc gcagttgggc gagcctaaat ggagcgaaag cgtgccgttt ttctccagtt
     2041 taattttcgc gccgttgaca ccgccggagc cgggcggttc tttcatctcg ggaaagatcg
     2101 ccatgtcgcg cgccgcattg cgcccgccgg gctcgacgcc gatgacgatg ccgatgccga
     2161 tcagcttgcc ttgttcgcgc gctgtttttt gctctgcgcg cagcttgtcg tagtcgattt
     2221 tctctaaaag ggcttttagc aggccggggt aatcgccgct gtcgtagacg ttgccgctga
     2281 tagtcgtgta cggcatctcg ttggcctgga tgagattttt ccggcgcact tcgatgggac
     2341 tcaagttgag ctcctgagcg actctgtcca tcatccgttc ccagatgaag cacatgaccg
     2401 gcttgccgat gccgcggttg gggatgaccg gacacttgtt ggtcaccacc gcgttgcctt
     2461 ccatgtaaat ggccggcgtc ttg
//
LOCUS       DATIRS010000082         1869 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1186688, whole genome shotgun sequence.
ACCESSION   DATIRS010000082 DATIRS010000000
VERSION     DATIRS010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1869
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1186688"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..197
                     /locus_tag="VLM90_01025"
     CDS             <1..197
                     /locus_tag="VLM90_01025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11563.1"
                     /translation="DQSDRIQSITVQWEASAAGREPSDAQLSVIEELCIHIYKQRKKI
                     NLASERQGHRPFVSVGRANR"
     gene            complement(445..>1869)
                     /locus_tag="VLM90_01030"
     CDS             complement(445..>1869)
                     /locus_tag="VLM90_01030"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HSQ11564.1"
                     /translation="IYLSEKGTAEMELVDCRDFYVDVNSVSDILQRLANAAASAPKGS
                     WLVSHGSPMQDFRISDHRFPDKHDLDRAVPDHPMSISFGAHVTIGNSLALAAAKITRD
                     TPDPAGGHIKHDPQTGEPTGELHERAQLILKKVAPEFNYLQLKEGIVYALNQCLERGV
                     TTVHDIVRYAEPVRAYQELYKEGRMNARVSILPRVIESMIESKSLTELGLITGFGNEW
                     LRIGGVKMSIDGGITGRNACFHEPYENDEHNHGIIRIQQDELNHTVQVCHDAGLRCCV
                     HAIGDKAFDMALDAYENAIEHSPRKDHRHRIEHMGNWLATPKLIGRMVRSGIVAVPNI
                     AFAYYIGDAILDCVGERRLTKAFPFHTLLKNGVIMSGGSDSPGYWPVDPLRDIATAAS
                     RKMRWGEVWIPEEKITVAEAFAMHTTTASWVGFEENDKGTLEVGKLADIAVLAEDPFG
                     VQPEKIRELKVAMTLVGGEVKYQA"
BASE COUNT          373 a          515 c          552 g          429 t
ORIGIN      
        1 aagaccaatc ggataggatc caatcgataa cggtgcagtg ggaagcgagc gcggcaggcc
       61 gggaacccag cgatgcacaa ttgtcagtga tcgaagagtt gtgcattcac atctacaagc
      121 agcgcaagaa aatcaatttg gcatccgaac ggcaaggcca ccggcccttt gtcagcgtcg
      181 gcagggcgaa tcgttaaaac ttattagcgc aataattagc gtctaaaaca aagggcgacc
      241 ttgcggtcgc cctttgtttt acgttccatt agtttgatgt cgtctgcgcg aattttctcg
      301 ccaggcgatc gccactccgc caccccagag cgtatgccat acgcccctac aaagaaatcc
      361 gacctttgcg gcctttgcgt gcgttgcggg agataatccg aggtgcggtt gcggcggtgc
      421 cgcgttctat ttgttgtgcg ctcgctacgc ctggtacttc acttcaccgc cgaccaaagt
      481 cattgcgacc ttcagttctc gaatcttctc gggttgtacg ccgaaggggt cttcggccaa
      541 gaccgcgatg tcggcgagct tgccaacttc tagtgtacct ttgtcgtttt cttcaaagcc
      601 gacccatgac gctgtcgtcg tatgcatggc gaaggcctcg gcgacggtaa tcttttcttc
      661 gggaatccac acttcgcccc agcgcatttt acgggacgca gcggtggcga tgtcgcgcag
      721 cggatccacc ggccagtagc ccggcgagtc ggagccgccg gacatgatga cgccgttctt
      781 caacagcgtg tggaagggaa acgccttggt cagacgccgt tcgccgacgc aatcgagaat
      841 cgcatcgccg atgtaatagg caaaggcgat atttggcacg gcgacgatgc ctgagcggac
      901 catgcgaccg atcaatttgg gcgtggcgag ccaattgccc atatgttcga ttcgatggcg
      961 atgatctttg cgcggcgaat gctcgatggc attctcatag gcgtcgagcg ccatatcgaa
     1021 ggctttgtcg ccgatggcgt gcacgcagca gcgcaggccg gcgtcatggc agacttgcac
     1081 cgtgtggttc aattcatcct gctggattct gattatccca tgattatgct cgtcgttttc
     1141 atagggttcg tggaagcagg cgttgcgccc ggtgatgccg ccgtcaatgc tcattttgac
     1201 gccgccgatg cgcagccact cgttgccgaa gccggtgatg aggcccaact cggtcaagct
     1261 tttgctttcg atcatcgatt ctatgacgcg cggcaggatg ctcacccggg cgttcatgcg
     1321 gccttcttta tatagttctt ggtaggcgcg caccggttcg gcgtagcgga cgatgtcatg
     1381 cacggtggtg acgccgcgtt cgagacattg gttcagggca tagacgatgc cttcttttag
     1441 ctgcaggtag ttaaactccg gcgcgacctt tttgagaatt aactgcgccc gctcatggag
     1501 ctcaccggtg ggttcgccgg tctggggatc atgttttata tggccacccg cgggatcagg
     1561 cgtgtcacgg gtaattttcg ccgctgccag ggccagggag ttgccaatcg tcacatgggc
     1621 gccgaaggag atcgacatcg gatgatccgg cacggcgcgg tcgaggtcat gcttgtcggg
     1681 gaaacgatgg tcactgatgc ggaagtcctg catcgggctg ccatgggaaa ccagccagga
     1741 tcccttgggt gcgctggcgg cggcattagc caggcgctgc aagatatccg acaccgaatt
     1801 tacatcgaca tagaagtcgc ggcagtcgac cagctccatc tcagccgtgc ctttttccga
     1861 taaatagat
//
LOCUS       DATIRS010000083         3731 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1383468, whole genome shotgun sequence.
ACCESSION   DATIRS010000083 DATIRS010000000
VERSION     DATIRS010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3731)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3731)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3731
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1383468"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            413..1015
                     /locus_tag="VLM90_01035"
     CDS             413..1015
                     /locus_tag="VLM90_01035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11565.1"
                     /translation="MSCYLTPKIPIVADEQVERMVSDEAGRILYAADPRAEFSRYSFQ
                     LSAFPRQDLLGVSIGRGRIYISYQLAQLALKKSYYRWLLRQTLAHEIAHELAGHANQR
                     GAVANNPSLQAGVTARHLGLDGLVQFQNYSVEKELQADFYAMSYWATLGWDCAIWVNI
                     LRGFQKQNYDGDVFHPTDRRLEQASINCPAIRPPPTLPPA"
     gene            1312..2727
                     /locus_tag="VLM90_01040"
     CDS             1312..2727
                     /locus_tag="VLM90_01040"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSQ11566.1"
                     /translation="MADRYDAVVIGAGPNGLAAAITLAQAGRSVVIYEAEAIPGGGAS
                     SRELTLPGYVHDVCSTVYPLAIGSPFFRTLPLEQHGLQWIHPPAPLAHPLDDGTAVIV
                     ERSIDATAANLAGDAGCYRRLMNYFCARWDGLAVDLLGPPRLPHGPCALARFGLLGIR
                     PAANFAHSYFKGVRARALFAGLAAHSMLPLESLGSAAFGLVLAIAAHSVGWPVARGGA
                     QNLTAALTSYARALGVAIITRRRIVALSELPKARAVLCDVTPRQLLALAGNGLPHRFQ
                     RRLQNYRYGMGVYKVDWALSAPVPWRAAECARAATVHVAGTLEEIAWSERAAWRGEQS
                     ARPFVLIAQPSLFDASRAPPGKHTLWGYCHVPHGSKQSMLDSIENQIERFAPGFRDIV
                     LARHMMGPALLEQRNANLVGGDINGGSADLRQLFLRPSWRMYGTPVRGLYLCSASTPP
                     GGGVHGMCGYFAARQALSEME"
     gene            complement(2941..3333)
                     /locus_tag="VLM90_01045"
     CDS             complement(2941..3333)
                     /locus_tag="VLM90_01045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11567.1"
                     /translation="METSTSPDQVLPTKVEAQLISQSLREAEIERLAGEIGRLIQDSD
                     PESREELAQSANSLLREQGLRLNPASVNDQVVADARRRPLNPLAAGIGLIMVGAAITL
                     LLPFVGLTLAACGVLAVLWGVLISTLKK"
     gene            3481..3726
                     /locus_tag="VLM90_01050"
     CDS             3481..3726
                     /locus_tag="VLM90_01050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11568.1"
                     /translation="MKEIIKIGVVVKMKKTSAEIAGQNQAAEPLLIELSPAANSNLKT
                     LQLLSLDRQGRQPSPSQIIERLINAAAVNGPDAPYPG"
BASE COUNT          733 a         1050 c         1123 g          825 t
ORIGIN      
        1 ggctttggca aaagttctca atcagaccgc gccaaaaaag cttggcacag caagcgtttt
       61 cgacaaattt caacgcgttg gtcgaaccag tccaacgaaa cctagcgatt gagtcggtca
      121 aagcgcaatc tcccccgacg cggcgaagcc gcaatccaac cagctaagcg acaggcaagg
      181 cgcgccaatc caatcggact ggtagggcgg tgttgaaatc cgccctgacc gccagtcgcc
      241 gtcgggcggg cgcggtgggc gcggttggcg acgctttccc gttatgctag tctgcggcag
      301 ttttcacttc cgatgattcg ccaatccggc ccttaggcag gggagcatgg tctggaacag
      361 aattagcatt gtgaaattgt ctttcggttt gattgtcgct agcactgtga cgatgtcctg
      421 ctacctgacg ccaaaaattc cgatcgttgc cgatgagcaa gtcgagagga tggttagcga
      481 cgaagccggt cggatcctgt acgcggccga tccgcgcgcc gagttttccc gttatagttt
      541 tcagctttcg gcgtttccgc ggcaggatct gctcggtgta agcattggcc gcgggcggat
      601 ctatatcagt tatcagctcg cgcagctggc gctcaaaaaa tcctattatc gctggttgct
      661 gcggcagacc ctggcccatg aaatcgccca cgagcttgcc ggacatgcga accagcgcgg
      721 cgccgtcgct aacaacccgt cattacaagc gggggtcacg gcacgccatc tcgggctcga
      781 tgggctggtg caattccaaa actattccgt cgaaaaagag ttgcaagcgg acttttacgc
      841 aatgagttat tgggccacgc ttggctggga ttgcgccatc tgggtcaata ttctgcgcgg
      901 ctttcaaaag cagaattatg acggagatgt tttccacccg accgatcgcc gcctggagca
      961 ggcgtcaata aactgtcccg cgatccgccc gccgcccacg cttccgcctg cctagactgc
     1021 gggcttggct taatctctca cgaacatact tgatgacgcg ctcaaatagc tgaacagaga
     1081 agcggtctca gcttggattc gctcgcctaa agtcagtgga attttcaccc gcggtcgctt
     1141 gccaggtttt cgaattgcca atctgcatac gctgtggctc ttgcgaccca tgtcttgctc
     1201 gctgcttgat tgtcgaaagg gagcggagtt tttgttgcga aactgaatga ttttaacttt
     1261 tgccctgtca aaatatcgga cagcgcagca atcccgcgct attatttagt gatggcagat
     1321 cgttatgacg cggtggtgat tggcgccgga ccgaacggct tggcggcggc gatcacgctg
     1381 gcgcaggcgg gccggtcggt ggtcatctat gaggcagaag cgatccccgg cggcggggcg
     1441 agctcgcggg agcttacctt gccgggttac gtgcacgatg tctgctcgac ggtttacccg
     1501 ctggccatcg gctcgccgtt ttttcgcacc ctgccgcttg agcagcatgg gcttcaatgg
     1561 atccatccgc cggcgcccct ggcgcatccg ctcgacgatg gcacggcggt gatcgtcgag
     1621 cgttcgatcg atgccactgc ggctaatctc gctggcgacg ccggctgcta tcgccgcttg
     1681 atgaattatt tctgcgcccg ctgggacgga ttggcggtcg acctgttggg tccgccgcga
     1741 ctgccacacg gcccatgtgc gctggcgcgc ttcggccttc ttggcattcg tccggcggcg
     1801 aactttgccc atagctattt caaaggggtt cgggcacgcg cgctattcgc cggattggcg
     1861 gcccattcca tgttgccgct cgaatcattg ggctcggcgg cattcggcct ggtcttggcg
     1921 attgccgccc atagcgtcgg ctggccggtg gctcgcggcg gcgcgcaaaa cttgaccgct
     1981 gctttgacct cttacgcgcg cgcgctgggc gtggcaatta tcacgcgccg gcgcattgtc
     2041 gcgctcagcg agttgccgaa agcgcgcgcc gtgttatgcg atgtgacgcc gcggcaactt
     2101 ttggcgctcg ccggaaatgg cttgccgcac aggtttcagc gccgcttgca aaactatcgc
     2161 tacggcatgg gcgtgtacaa agtcgattgg gcgctctcgg cgcccgtccc gtggcgagcc
     2221 gccgagtgcg cgcgcgcagc caccgtccac gtcgccggca cgctggaaga aattgcctgg
     2281 tcggaacgcg cggcgtggcg cggcgaacag agtgcccggc ccttcgttct gattgcgcag
     2341 ccctcgctct tcgatgcgtc gcgcgcgccg ccaggcaaac acacgctgtg gggctactgt
     2401 catgtgcccc acggatcgaa gcaaagcatg ctcgatagca ttgaaaatca gatcgaacga
     2461 tttgcgccgg ggtttcgcga tatagtgctg gcgcggcaca tgatgggacc ggcgcttctc
     2521 gaacagcgca atgccaatct ggtgggcggg gacatcaacg gcggttctgc cgatctgcgg
     2581 cagctatttt tgcggccgtc ctggcggatg tatgggacgc cggtaagggg tctttatctg
     2641 tgctcggcgt cgacgcctcc cggcggcggc gtgcacggca tgtgcggcta ttttgcggcg
     2701 cgccaggcac tcagcgaaat ggaataaagt cattggctta gctggcgcaa cgaccccagc
     2761 gagaatttgg tcaatcgttg gcgcaaacga gcgcgacacg agattgggtg atcgtgagag
     2821 atgaaaaaaa gttcggttat gtcgaagaga agggcacgat ttcgagaatt ttttcgccca
     2881 ggatggtgtc aatgccggcc accgcaccgt tgccaagccg ccgtgaatag ttcgctttaa
     2941 ctattttttc agcgtgctaa tcagtactcc ccagagcacg gcgagcacgc cgcacgccgc
     3001 cagtgttaga ccgacaaatg gcagcaagag cgttattgcc gcgccaacca taatcaatcc
     3061 aataccggcg gcgagtggat tgagcggacg gcgccgtgcg tcagctacga cttgatcgtt
     3121 tacggatgcg ggattcaggc gcagcccttg ctcacgaagc agtgaatttg cgctttgtgc
     3181 gagttcttca cggctctcag ggtcagagtc ttgaatcaaa cgcccgattt cgccggctag
     3241 cctctcgatt tccgcttcgc gcagcgattg cgaaatcagt tgcgcttcaa ccttcgttgg
     3301 taaaacctga tcgggcgaag tcgaggtttc cataactaat ttgtgagcaa tgctcatgcc
     3361 agtgtgtggc cgcggttggt ggacgacccg tgccgatgcg ccaaactttc aggtggatta
     3421 agtcttgcaa agttatgttg tggattgagt tttgcgaagg ttgttgggaa ggcacgcggt
     3481 ttgaaagaaa ttatcaagat aggtgttgtg gtcaaaatga agaaaacatc cgctgaaata
     3541 gccggacaaa atcaagcggc cgagcctctg cttatcgagc tcagcccagc agcaaatagc
     3601 aatctgaaaa cgctccagtt actctcttta gatcgacagg ggcggcaacc gagtccgtca
     3661 cagattatcg aaagactgat caacgctgct gcggttaacg gccctgatgc gccttatccc
     3721 gggtgaatgg g
//
LOCUS       DATIRS010000084         2700 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1678548, whole genome shotgun sequence.
ACCESSION   DATIRS010000084 DATIRS010000000
VERSION     DATIRS010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2700
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1678548"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(264..1382)
                     /gene="prpC"
                     /locus_tag="VLM90_01055"
     CDS             complement(264..1382)
                     /gene="prpC"
                     /locus_tag="VLM90_01055"
                     /EC_number="2.3.3.16"
                     /EC_number="2.3.3.5"
                     /inference="COORDINATES: protein motif:HMM:NF009006.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050440 - 2-methylcitrate synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate synthase"
                     /protein_id="HSQ11569.1"
                     /translation="MAEKKTGGLEGVIAGSTAISTVGKQGVGLTYRGYSIEDLAAHST
                     FEDVAYLLIYGQLPKADELDEYKARLRNLRGLPATLKTVVEQIPASAHPMDVLRTGCS
                     MLGTLEPENAGRTQIAVANRLTACFSGMLLYWHHYVSSGTRIHTETDDDDTAGHFLNL
                     LHGKKPSDLHRRAIDASLILYAEHEYNASTFTARTITATLPDFYSAVVGGIGALRGPL
                     HGGANEAAMELIEQFSTPDEAEKGLLQMMAAKKLIMGFGHRVYKISDPRSNVIKAWSK
                     QLGEAKGDCKLYEISERIEAVMRREKKMFPNLDFYSASAYHYCGIPTVMFTPLFVISR
                     ITGWAAHIIEQRADNRLIRPNADYNGPAPRPFVPVNKR"
     gene            1632..2633
                     /locus_tag="VLM90_01060"
     CDS             1632..2633
                     /locus_tag="VLM90_01060"
                     /inference="COORDINATES: protein motif:HMM:TIGR02823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhdH/YhfP family quinone oxidoreductase"
                     /protein_id="HSQ11570.1"
                     /translation="MALPQTFKAMVVSETAEKSFVREIRQKALSDLPAGELIVEVKYS
                     SLNYKDALSASGNKGVTRKYPHTPGIDAAGVVATSTTRMFAAGDQVTVTGFDFGMNTS
                     GGFGQYISVPALWAAKVPQSLSLRDSMGYGTAGLTAALCMIRLMASGLTKESGEVLVT
                     GATGGVGCLAVAILAKLGFNVVAATGKTEEKEFLTQLGAKTIISREEANDTSGRPLQK
                     GRWAGVVDTVGGNILATALKTAKYGGLVAACGNAMSADLNVNVFPFILRGVSLLGVDS
                     VEIPMRARQLAWNKLAGEWSVDLSTIVKEVSLEGLDGEIEKILKGGVRGRVVVDLSK"
BASE COUNT          552 a          718 c          844 g          586 t
ORIGIN      
        1 cgggaaagcg cagcgccagc agaccgcagc ccaaggtatc gattaaatta taacgcgccg
       61 tgtcgatggc ttcgcggctg gtcgcgacgt aactcgcagc gtaatcggca aggtcggtta
      121 atatcttgtc tggttcagga cgtatgtttg agacagcttc gctcatgttt acactcaatt
      181 ccgttcaaaa gttcaaccgt tcaagggttc aacgttgggg gcggagacgt tgaacttttg
      241 aacccttgaa ccttgaacgg cggttatctt ttgttaaccg gcacgaaggg ccgcggcgct
      301 gggccgttgt aatcggcgtt ggggcgaatc aagcgattgt cggcgcgctg ctcgatgata
      361 tgcgccgccc agccggtgat gcgcgagatg acaaacagcg gcgtgaacat caccgtcgga
      421 atgccgcagt agtgataggc gctggcgctg tagaaatcca agttgggaaa catctttttt
      481 tcgcgccgca tgactgcttc gatgcgctcg gaaatctcat aaagcttgca gtcgcccttg
      541 gcctcgccga gttgtttcga ccaggctttg atgacgttgg aacgcgggtc ggaaattttg
      601 tagacgcggt ggccgaagcc catgatgagc tttttcgccg ccatcatttg cagcaaacct
      661 ttttccgctt catctggcgt cgagaactgc tcgatcagct ccatcgccgc ttcgttggcc
      721 ccgccatgga gcgggccgcg cagagcgccg atgccgccga cgacggcgga ataaaagtcc
      781 ggcagcgtgg cggtgatggt ccgcgcggta aacgtagacg cgttgtactc atgctcggcg
      841 tagagaatca gcgatgcatc gatggcgcgg cggtgcagat cgctgggctt tttgccgtgc
      901 agcagattga gaaaatggcc ggcggtgtca tcgtcgtcgg tttcggtgtg aatgcgcgtg
      961 ccgctgctga cataatggtg ccagtagagc agcatgccgc tgaagcaggc ggtcaaccgg
     1021 ttggccaccg cgatctgggt gcggccggcg ttctccggct ccagggttcc cagcatcgaa
     1081 cagccggtgc gcaggacatc catcggatga gcgctggcgg ggatttgttc cacaacggtt
     1141 ttcagcgtcg ccggcaggcc gcgcagattg cgcaggcgcg ctttgtattc gtccagttcg
     1201 tccgccttgg gcagctggcc atagatcaat aagtaagcga catcctcgaa tgtcgaatgg
     1261 gcggccaagt cttcgatgga ataaccgcgg taggttagac cgacgccttg tttgccgact
     1321 gtcgagatcg cggtgctgcc ggcaatgacg ccttcgagac cgccagtttt tttctctgcc
     1381 attgttcaat cctccaattc gacaatgcta cgaattcgct aaccaaatca agcggcgtca
     1441 tccaacgatt tgaactactt gaacgtttgg aacggatgga accaaaaggt tcaatcggtt
     1501 ccaatggttc aaaacgctca agccgtttcg gagtggctgc gcagcggcta ttgagcttcc
     1561 agctcttgac agttcgccgg ttgattggat accgctggta taaccaattt tctaaggagc
     1621 tcatttaatc gatggcttta ccgcaaacat ttaaagcgat ggtggtttct gaaacggctg
     1681 agaaatcctt tgtccgcgag attcgccaaa aggcgctcag cgatctgccg gccggcgagt
     1741 tgattgtcga agtgaagtac tcgtcgctca attacaaaga cgcgctgtcg gcgagcggca
     1801 acaagggcgt gacgcgcaag tatccgcata cgccgggcat cgacgcggct ggtgtcgtgg
     1861 ccacctcgac gacgcgaatg tttgcggccg gcgatcaggt gacggtgacg ggattcgatt
     1921 tcggcatgaa tacttcgggg gggtttggcc agtacattag cgtgcccgcg ctgtgggcgg
     1981 ccaaagtgcc acagtcgcta tcgctgcgcg acagcatggg gtacggcacg gcgggtctga
     2041 cagcggcgct gtgcatgatt cggctgatgg ccagcggttt gaccaaagag tcgggggagg
     2101 tattggtcac cggtgccacc ggcggtgtcg gttgtctcgc cgtggcgatt ctcgccaagc
     2161 tcggcttcaa cgtcgtcgcc gccacaggga aaacagagga gaaggagttc ctcacccagt
     2221 tgggcgccaa gacgatcatc tcgcgcgagg aagccaacga tacgtccgga cggccgctgc
     2281 aaaaaggccg gtgggccggt gtcgtcgaca cggtcggcgg caacattctc gccaccgcgc
     2341 tcaaaacggc gaaatacggc ggcctggtgg cggcctgcgg caatgcgatg tccgccgatc
     2401 tcaacgtcaa cgtgtttcca tttattctcc gcggtgtcag tctgctcggc gtcgattccg
     2461 tcgagatccc gatgcgcgcg cgccagctgg cctggaacaa actcgccggc gagtggagcg
     2521 tcgatctgtc gaccatcgtc aaagaagtgt ccctcgaagg gctggatggc gagatcgaga
     2581 agattctcaa aggcggcgtg cgcggcagag ttgtggtgga tttgagtaag taagtgaatc
     2641 ggatctttca ccacgaaggc acgaagagca cggaaggttt cggaaaatta ggtttccgaa
//
LOCUS       DATIRS010000085         1654 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_990320, whole genome shotgun sequence.
ACCESSION   DATIRS010000085 DATIRS010000000
VERSION     DATIRS010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1654
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_990320"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..186)
                     /locus_tag="VLM90_01065"
     CDS             complement(<1..186)
                     /locus_tag="VLM90_01065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11571.1"
                     /translation="MRQDYAELRKDRLELRRDIRNGASKEEILQGRREIRGDLKEIRE
                     SRAELSRDQARLEAARRE"
     gene            178..642
                     /locus_tag="VLM90_01070"
     CDS             178..642
                     /locus_tag="VLM90_01070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11572.1"
                     /translation="MAQIFAASLNFFARGADVLKILADFRVVEDSPIIDAPVASEVVA
                     STVVTIEARVAPVTVTIMPPVAIMAFVSAMASLIMAFPAVKLVRLAMPAAVVVFSPLV
                     ALTAIIGISCRRQEWDQQSARKQPCYDNSHCFLHYDSPFILDNFNDSLTPSV"
     gene            complement(639..977)
                     /locus_tag="VLM90_01075"
     CDS             complement(639..977)
                     /locus_tag="VLM90_01075"
                     /inference="COORDINATES: protein motif:HMM:NF024879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper domain-containing protein"
                     /protein_id="HSQ11573.1"
                     /translation="MRSSKWIAAVGLTATIAAGCAGGPMTTREKGAGIGALGGAAAGG
                     LIGTAFGRPGMGAAIGAGTGLAGGALIGDYMQGQEQTQYEYNQQQIQHNQRVIERNRY
                     ETQRLQGSEY"
     gene            1389..>1654
                     /locus_tag="VLM90_01080"
     CDS             1389..>1654
                     /locus_tag="VLM90_01080"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ11574.1"
                     /translation="MVFRFRFALVLSAGLFVASGVLGQDKPKIYLGASSKTLGYSPLW
                     VAAKKGFFEQQGLDVQLVLLRGVPMTVQALAANSLHFGSGGPEP"
BASE COUNT          282 a          489 c          465 g          418 t
ORIGIN      
        1 ctctcggcgc gccgcctcaa gtctcgcctg atcccggctc agttccgccc ggctttcgcg
       61 tatttctttc aggtcgccgc ggatttcccg tcgcccttga aggatctcct ctttgctggc
      121 gccgttgcga atgtcgcggc gcaactctag ccggtccttg cgcagctcag cgtaatcttg
      181 gcgcaaatct ttgcggcttc cctgaacttc tttgcgcgcg gcgcggacgt ccttaaaatc
      241 ttggcggatt tccgggttgt ggaggactcc ccgattatcg acgcgcccgt tgcgtcggaa
      301 gtcgtggcgt ccacggtcgt tacgatcgaa gcgcgcgtgg cgccggtaac cgtgacgatc
      361 atgccgcccg tggctatcat ggcgtttgta tccgccatgg cgtccctgat catggccttt
      421 cccgcggtga aattggtgcg gcttgccatg cccgcggccg tggtcgtttt ttcgccactc
      481 gtggcgttga ccgcgattat cggcatcagc tgtcgccggc aggagtggga ccagcagagt
      541 gcccgcaaac agccctgcta cgataatagt cattgttttc ttcattatga ttctcccttc
      601 attctcgaca attttaacga ctcactaact cccagtgttt agtattccga accttgcagc
      661 cgttgcgttt cgtagcggtt acgctcgatg acccgttggt tgtgttggat ttgctgttga
      721 ttgtattcgt attgggtttg ttcttggccc tgcatgtagt cgccgataag cgcgcctccg
      781 gccaaacccg tgccagcgcc gatcgccgcg cccatgcccg gacgaccgaa ggccgtgccg
      841 atcaagccgc cggcagccgc gccgccaaga gcaccaatgc ccgcgccttt ttctctcgtc
      901 gtcattggcc cgcccgcgca tccggccgca atcgtcgcgg tgagtccgac agcggcgatc
      961 catttagaac ttctcatttt cattttgcct cccttttgat tggattctgc ttcgttcctc
     1021 atggcaggcc tgtagagcaa cgcacgtgcc acacgcggaa aatttctaag tcattgactt
     1081 cgccatgcag aacatgacta cggtgctcgc cgagcaagta ataattacgc ggtggctggg
     1141 aaaatattcg gatgaagtgc tgatgggttt cgaacttacg aagcggcgat ccaatcgaag
     1201 ccgtttctgg tcggaccata gccatttcat gccaggagtc gaaagggtct cctgcatggc
     1261 gcgcctgcca ctactatgag cgcttgcttg aaatctgacg atcctctggt gtagagattg
     1321 gacgcgttac cacggaattt ggaagtccag actatttgct cgtagcaatc gaagcgctgg
     1381 agggcaaaat ggttttccgt ttccgcttcg ctcttgttct atctgccggt ttatttgtcg
     1441 cgagcggcgt gctcggccag gacaaaccca aaatctatct cggcgcatcg agcaagacgc
     1501 tcggctacag ccccctctgg gtggcggcta agaaaggttt cttcgaacag caagggctcg
     1561 acgtccaatt ggtgctgctg cgcggcgtgc cgatgaccgt gcaggcgttg gcggcgaatt
     1621 cgcttcactt cgggtcgggc gggccggagc cgta
//
LOCUS       DATIRS010000086         1726 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1776838, whole genome shotgun sequence.
ACCESSION   DATIRS010000086 DATIRS010000000
VERSION     DATIRS010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1726
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1776838"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..276
                     /locus_tag="VLM90_01085"
     CDS             <1..276
                     /locus_tag="VLM90_01085"
                     /inference="COORDINATES: protein motif:HMM:NF021941.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11575.1"
                     /translation="ATAVVATMEVYLPLDDLINLDEERARLAKEVAKMEDEINRVQKK
                     LGNSDFVAKAKEEVIQKERDKAAQFDEKLRALRSSLAKIEDLQAGGN"
     gene            281..1129
                     /gene="nadC"
                     /locus_tag="VLM90_01090"
     CDS             281..1129
                     /gene="nadC"
                     /locus_tag="VLM90_01090"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR00078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0019363 - pyridine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HSQ11576.1"
                     /translation="MDIHVSPQIERLIRDALDEDIGAGDLATMATISADARGKGLFRA
                     KKDGVAAGLVLLDRIFYFIDHRVEVRLLVKDGTPVKSGTVVAEVIGPVRALLLGERTA
                     LNFLQQLSGTATLTRKLVDAVKDFPCKVLDTRKTTPGLRTLQQYAVRMGGGTNHRIGL
                     YDAALVKDNHIEATGSIAEAVKAVRRHAPFMAKVEVEAGDFKQVQEALDAGADVIMLD
                     NMNLAQMAEAVKLINQRAGVEASGGITLESIRQVAETGVDFISSGALTHSAPVVDFNM
                     KITMNV"
     gene            1122..>1726
                     /locus_tag="VLM90_01095"
     CDS             1122..>1726
                     /locus_tag="VLM90_01095"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR00121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004077 - biotin-[acetyl-CoA-carboxylase]
                     ligase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HSQ11577.1"
                     /translation="MSEAKTDSSAPGAGFAALDVARVRQRLGAGRFGKTIHYFHEIGS
                     TNSYARERAELGAAEGELVVAESQSHGRGRLGRRWESPPFANLYVSIILRPKLAPAHA
                     AQITLMAAVAVAEVVEAFVPVKPAIKWPNDILIGGKKLAGILTEAACSAERVEYVILG
                     IGVNVNYASAAMPEEIRRLATSVLEVAGRPVQRESFLRRLI"
BASE COUNT          365 a          478 c          544 g          339 t
ORIGIN      
        1 gccaccgcgg tggtcgccac catggaagtt tatctgccgc tcgacgatct gatcaatctc
       61 gacgaagagc gggcgcgttt ggctaaggaa gtcgccaaga tggaagacga gattaataga
      121 gttcaaaaga aactcggcaa tagcgacttc gttgccaagg cgaaggaaga agtgattcaa
      181 aaggagcggg acaaggcggc ccagttcgat gagaaactcc gcgcgttgcg gtcgagcttg
      241 gccaagatcg aagatctcca agcgggaggg aattaatcct atggatatcc atgtcagccc
      301 acagattgaa aggttgattc gcgacgccct ggacgaagat atcggcgccg gcgatctggc
      361 gaccatggcg acgatctcgg cggatgcccg aggtaagggg ctgttccgcg ccaagaagga
      421 cggcgttgcc gccggtttgg tgctgctcga ccggattttt tatttcatcg atcatcgagt
      481 tgaggttcgt ttgctggtca aagacggcac tccagtgaag tccggcactg tggtcgccga
      541 agtcattgga ccggtgcgcg cgttgctcct gggcgagcgc acggcgctga atttcttgca
      601 acaactgtcc ggcacggcta ctttgacgag aaaattggtc gatgcggtca aagattttcc
      661 ctgcaaagtt ctcgatacgc gcaagaccac gccggggctg cgaaccttac agcagtacgc
      721 cgtgcgcatg ggcggcggca ccaatcatcg catcgggctc tacgacgccg ctttggtcaa
      781 ggacaatcac atcgaagcca ccgggtccat cgccgaggcg gtcaaggcgg tgcgccgcca
      841 cgcgccgttc atggccaaag tcgaagtcga ggcgggcgac tttaagcaag tgcaggaagc
      901 tctcgatgcc ggcgccgatg tcatcatgct cgacaacatg aacttggcgc agatggccga
      961 agcggtaaag ctgattaacc agcgggccgg cgtcgaagct tccggcggca ttaccttgga
     1021 atcgattcgc caagtcgccg agaccggtgt cgattttatt tcctccggcg cgctcaccca
     1081 ttcggcgccg gtggtcgact tcaacatgaa aatcaccatg aatgtctgaa gccaagaccg
     1141 attcatcagc gccgggcgcg gggttcgctg ccctggatgt cgcacgggtg cggcaacgcc
     1201 tcggtgccgg ccgcttcggc aagaccattc actattttca cgagatcggc tcgaccaaca
     1261 gctatgcccg tgagcgcgcc gagttaggcg cagccgaggg cgagctggtg gtcgccgaat
     1321 cgcagagtca tggacgcggt cgtttagggc ggcgctggga atcaccgcca ttcgccaatc
     1381 tctatgtctc gataatactg cggccgaaac ttgcgccggc ccatgcggcg cagatcactt
     1441 tgatggcggc ggtggcggtg gccgaagtgg tcgaggcgtt tgtgccggta aaacccgcga
     1501 tcaaatggcc caacgacatt ctcattggcg gtaaaaagct tgccggcata ctcacggaag
     1561 cggcctgctc ggccgagcgc gtcgaatatg tgattttggg tatcggcgtc aatgtcaatt
     1621 acgccagcgc ggcgatgcct gaagagattc gccggcttgc cacctcggtg ctggaagtgg
     1681 ccggccggcc ggttcagcgg gaaagcttcc tgcggcgatt gattca
//
LOCUS       DATIRS010000087         1891 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_891876, whole genome shotgun sequence.
ACCESSION   DATIRS010000087 DATIRS010000000
VERSION     DATIRS010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1891)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1891)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1891
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_891876"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..996)
                     /locus_tag="VLM90_01100"
     CDS             complement(<1..996)
                     /locus_tag="VLM90_01100"
                     /inference="COORDINATES: protein motif:HMM:NF013384.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-eliminating lyase-related protein"
                     /protein_id="HSQ11578.1"
                     /translation="MDGAAKGVTFSVPYEMAVVRPLRQTTEPERQAALAKAHYNTDII
                     PQELIYIDLSTDSGVSASSTGQLAAAAKPVEPGMGLASEGSGAYGRLAAQLQRYFGFD
                     YFVPTTQGRSAERIWTKIHVKPGNVVAGNLLFPSTRSHIEMAGAQIVDVIGEAAHDFA
                     SDDPFKGNIDLDKLEKLVQEKGDGQVSCIYVELSVNSCGGHPVSLGNLSDVKALAASH
                     KIPLFLDACRILENSALIKMREAPYRQWSLAEIVRETCDLADGATLSALKDFLVGTGG
                     FIFTRDRGSQQKAAMQSFLDGVQLSAGAMDAIAAALPEIFAGEAYMTQRVEQVKYL"
     gene            complement(1108..>1891)
                     /gene="cutA"
                     /locus_tag="VLM90_01105"
     CDS             complement(1108..>1891)
                     /gene="cutA"
                     /locus_tag="VLM90_01105"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010038 - response to metal ion [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="divalent cation tolerance protein CutA"
                     /protein_id="HSQ11579.1"
                     /translation="TVGTGEEADRMAQALVGEQLAACVNLVRSIQSVYRWQGKVEQND
                     EELLIIKTRRQLFPALEKRVKELHSYSVPEIIALPIIEGSADYLTWLREQALAKPPQE
                     ENIRTVREVSAGGVIYRRSGELFEVALIHVRNRWGLPKGHVEEGERVEETALREVREE
                     TGLEGKLVRKLGDIRYSYRDKTKESEAIRIYKRVHFYLMRYVRGDVRDHDHESDDARW
                     FAIDQAMKQLKFATERKMVHRAMTMLTVRPAEPPAPAAKSGS"
BASE COUNT          354 a          596 c          544 g          397 t
ORIGIN      
        1 gagatatttc acctgttcga ctcgctgtgt catgtaagct tcgccggcga agatttccgg
       61 caaagcggcg gcgatggcat ccatggcgcc ggccgagagc tggacgccgt cgaggaaact
      121 ctgcatcgcc gccttctgct ggctcccccg gtcgcgggta aagataaagc caccggttcc
      181 gacgaggaaa tctttgagcg cactcagcgt ggcgccgtcg gccaagtcgc aagtttcccg
      241 gacaatctcg gcgagtgacc actgccgata cggcgcttcc ctcattttta tcagggcact
      301 gttctcaagg atgcggcagg catcgagaaa gagtggaatc ttgtgactgg cggcgagcgc
      361 tttgacgtcg cttagattgc ccagcgatac cgggtggccg ccgcaggagt tgacgctaag
      421 ctcgacgtaa atgcagctaa cctgcccgtc acccttctcc tgaaccaact tttcgagctt
      481 atcgaggtcg atattgccct tgaacgggtc gtcgctagcg aaatcatggg cggcctcgcc
      541 gatcacgtcg acaatctgcg ctccggccat ttcgatatgg ctgcgcgtcg acggaaacag
      601 caggttgccg gcgacgacgt taccaggctt gacatgaatc ttggtccaga tccgctccgc
      661 cgagcgtccc tgggtcgtcg gcacgaaata gtcgaatccg aaatagcgct ggagttgcgc
      721 ggcgagcctg ccgtaggcgc cacttccctc ggacgccaac cccatgccgg gctcgacggg
      781 tttcgccgcc gccgcaagtt gtccggtgct gctagcgctg acgccgctat cggtggacaa
      841 gtcgatgtaa atgagctctt ggggaatgat gtcggtgttg tagtgcgctt tggccagtgc
      901 ggcttgccgc tctggctcgg tggtctggcg cagcggccgc accaccgcca tctcgtaagg
      961 caccgaaaac gtcacaccct tcgctgcacc atccattgtt agccacttcg cggtaaaact
     1021 ccgcctttac gtaacatgaa atcggcgcgc tgaatataaa ataattgggg gtaaaccgat
     1081 ccgccgagcg atccgtttga gtggcagtta cgagccgctc ttggcggccg gcgccggcgg
     1141 ctcagccggg cgcaccgtca gcatggtcat ggcgcgatgc accatcttgc gctcggtggc
     1201 gaatttgagc tgcttcatcg cctggtcaat agcgaaccag cgggcgtcgt ccgactcatg
     1261 atcgtggtcg cgcacatcgc cgcgcacata gcgcatcaga taaaaatgca cccgcttgta
     1321 aatgcggatc gcctcgcttt ctttggtttt gtcgcgatag gaataacgaa tatcgccgag
     1381 cttgcgcacc agcttgcctt ccaggccggt ctcttcgcgc acctcgcgca gcgccgtctc
     1441 ctcgacccgc tcaccttcct cgacatgccc cttgggcaga ccccaacggt tgcgtacatg
     1501 aatcagcgcc acctcgaata gctcgccgct gcgccggtaa atcaccccgc cggcagaaac
     1561 ctccctgacc gtacggatgt tttcctcctg cggcggtttc gccaacgcct gctcgcgcag
     1621 ccaggtgagg tagtcagcgc taccctcgat gatcggcaag gcgatgatct cgggaaccga
     1681 atagctgtgc agctctttga cgcgcttttc cagcgccggg aagagctggc ggcgggtttt
     1741 gattatcagc agctcttcat cgttctgctc gaccttgcct tgccaacggt acaccgactg
     1801 aatcgagcgc accaggttaa cgcaagcagc caactgctcg ccgaccaagg cttgagccat
     1861 gcggtcggct tcttcacccg tgcccaccgt g
//
LOCUS       DATIRS010000088         2026 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1678717, whole genome shotgun sequence.
ACCESSION   DATIRS010000088 DATIRS010000000
VERSION     DATIRS010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2026
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1678717"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..624
                     /locus_tag="VLM90_01110"
     CDS             <1..624
                     /locus_tag="VLM90_01110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11580.1"
                     /translation="LDKLRAATGVKIGGQSLGFSTYNEGRLFGYMLGLKDPLFIAAFG
                     GAELDPALLRGEIDGRATGPDTILQRNRDFIDKGLANIHAIMETPKGEKHTHPAFSKL
                     PEIETFAKNDKERRMLALQRGFRVTGTPFVLPPGTPKDRVDILKDAFRKTYLDPEFTK
                     YYLKLSGDEPTPLLPENHEKAIRDVPRDPEAIELFKIIAGPKKLPPR"
     gene            894..>2026
                     /locus_tag="VLM90_01115"
     CDS             894..>2026
                     /locus_tag="VLM90_01115"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ11581.1"
                     /translation="MADLRTWLDEVNRLGQLMNVNDAHWNLELSTLTELINERSKTRP
                     AIVFDKIKEYPAGHRVAVNLLSSLQRLALTMGMDPKLAPFDFVQQWRKRVKSIQPIEP
                     RLVKSAPLFENVQKGADIDLFKFPVPKWHELDGGRYIGTDDLVVTRDPEEKWVNVGTY
                     RIMIHGRDHMGLHMSPGKHGRVHRDKSHADGKPLPIAVSFGHHPINFLVASTDVPYRV
                     NEYAYAGGITGQPHDIVAGPLTGLPIPADSEIAIEGEVAPNDFMPEGPFGEWTGYYAS
                     NQPAVPVIRVKAVYHRNDPILCGFPLLKPSSGDNLHFSLMLSALIWNSLDEAGVPDVQ
                     AVWSHPSGGRFMTVLAIKQRYPGHARQAAMIASQCRSGAYLGR"
BASE COUNT          438 a          633 c          555 g          400 t
ORIGIN      
        1 ctcgacaaac tgcgcgccgc caccggcgtc aagatcggcg gccagtccct cggtttctcc
       61 acttacaacg agggccgttt gttcggctac atgctcggac tcaaagaccc gctgtttatc
      121 gctgcattcg gcggcgccga actcgatccg gcgttgttgc gcggcgagat cgacggccgc
      181 gccaccgggc cggacaccat cctgcaacgc aatcgcgatt ttatcgataa aggcttagcc
      241 aacattcacg cgatcatgga gacccccaaa ggtgaaaagc acacccatcc ggctttctcc
      301 aagctgcctg agatcgaaac cttcgccaag aacgacaaag aacgcaggat gctcgcattg
      361 cagcgcggct ttcgcgtcac cggcacgccc ttcgtgctgc cgccgggcac gcctaaggac
      421 cgcgtcgata ttttgaaaga tgcgtttcgc aagacctact tggaccccga gttcactaaa
      481 tattatctca aactgtccgg cgacgagccg acaccgttgc taccggagaa tcacgagaaa
      541 gccatccgag atgtgccgcg cgacccggag gccatcgagc tgttcaagat aatcgccggg
      601 ccaaaaaaac taccgccgcg gtgagctgaa gaaagaagtt caaaaggttc ccttcggcat
      661 gctcagggct tgagtttata gaaggcaagc cgttcaatcg ctgcccttcg attgcgtcag
      721 ggccgtgagg ctctcgaacg gcgctcggtt caactctcct atgacacgga ggagagtgag
      781 gccacggcaa tcgctgcgga agtcctcatc cccgcctatt tccggaggac aagggataga
      841 ttctccgctg cttaaaagtc tcataatttt tcagcgagat aggaatattg gttatggcag
      901 acctacggac atggctcgat gaggtaaacc gactcggcca gttgatgaac gtcaacgacg
      961 cccattggaa tctggagttg tcgacgctga ccgaactcat caatgagcgt tcgaagaccc
     1021 ggccggcgat tgtcttcgac aagatcaaag agtatcccgc cggtcatcga gtagcggtaa
     1081 acttgctgtc gtcgttgcag cggctcgcgc tgaccatggg catggacccg aagttagcgc
     1141 ccttcgactt cgtgcagcag tggcgcaagc gggttaagtc cattcaaccc atcgagccgc
     1201 gtttggtcaa aagcgcgccg ctgtttgaaa acgttcagaa gggcgccgat atcgatttat
     1261 tcaagttccc cgtaccgaaa tggcatgagc tcgacggcgg ccgctacatc ggcaccgacg
     1321 acttggtcgt cacccgcgac ccggaagaaa aatgggtcaa cgtcggcacc tatcgcatca
     1381 tgattcacgg ccgcgatcac atggggctgc atatgtcgcc gggcaagcat ggccgcgtgc
     1441 accgcgacaa gtctcacgcc gatggcaagc cgctgcccat cgcagtctcc ttcggccatc
     1501 atccgatcaa ttttctcgtc gcctccaccg acgtgcccta ccgggtaaac gaatacgcct
     1561 atgccggcgg catcaccggc cagccccatg acatcgtcgc aggaccgctc accggattgc
     1621 cgattcccgc cgactccgag attgccatcg aaggcgaggt ggcgcccaac gatttcatgc
     1681 ccgaagggcc gttcggtgag tggaccggat actacgccag caaccaaccg gccgtgccgg
     1741 tgatccgtgt caaagcggtc tatcatcgca acgatccgat cctgtgcggt ttcccattgc
     1801 tcaaaccttc cagcggcgac aacctacatt tctcgttgat gctctcggcg ttgatctgga
     1861 attctctcga cgaagccggc gtgcctgacg tgcaagccgt ttggtcgcat ccttcaggcg
     1921 gccgcttcat gaccgtgctg gcgatcaagc agcgctatcc cggccacgcc cgccaggcgg
     1981 cgatgatcgc cagccagtgc cgctcgggcg cctatcttgg ccgcta
//
LOCUS       DATIRS010000089         1738 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_203739, whole genome shotgun sequence.
ACCESSION   DATIRS010000089 DATIRS010000000
VERSION     DATIRS010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1738
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203739"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            30..>1738
                     /locus_tag="VLM90_01120"
     CDS             30..>1738
                     /locus_tag="VLM90_01120"
                     /inference="COORDINATES: protein motif:HMM:NF014877.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11582.1"
                     /translation="MEPSTPSFLNYIPVPLTFGTRGLRGLVRDITDLEAYINVKGTLT
                     YLLNIADIARESIVVLAGDLRPSTDRIMRASVQAIIDLGFQVENAGKIPTPALIFHSL
                     ATRRAGVMVTGSHIPFDRNGIKINKSVGEVLKSDEAGIIREIDRVRAEEYSRTATTSA
                     FDPCGMLKSSLELPPLDRTAEKAYVRRYLSSFDSAGLSGLRVLVYQHSAVGRDILPRI
                     LQELGAVVLAAGRSETFIPIDTENITAEQLDCLEELAVAAEASGWPIHAIVSTDGDSD
                     RPLVAAVLPATEVRPGGRRVRFLPGDLLGLVVAEYLRADAAAVPISANDAVERRLRER
                     KVVLEKTKIGSPYVVSALDELRTAGTYERVVGWEANGGFLTGNDIALNKATLAALPTR
                     DATLPILANLFAAAERGMSLNALWDGLPARFGRAGLLDNFPVAVSQFILANLIPAGDV
                     IEVEFDGAERVLDRSRADATPAPLAPRPAEDWRERKATLARFFTLALGFDDIARINVL
                     DGVRAYFKNGDVAHIRPSGNAPQLRIYANRDLQARADEIVELAVSEPNGILREIERAY
                     SEDT"
BASE COUNT          346 a          517 c          516 g          359 t
ORIGIN      
        1 ttccgcgagc gcggattaga atcatccgca tggaaccttc aaccccgtca tttctcaact
       61 acatcccggt accgcttact ttcggtacca gaggcctgcg cggtctggtg cgggatatca
      121 ccgacttgga agcttatatc aatgtcaagg gaacacttac ttatttgctt aatatcgccg
      181 atattgcacg agaaagcatt gtcgtactcg cgggggacct acgcccgagc accgatcgga
      241 tcatgcgcgc gtccgttcaa gcgatcatcg atctgggatt tcaggtcgag aatgccggca
      301 agatcccgac gcccgcgttg atattccatt cccttgccac caggcgcgcc ggcgtcatgg
      361 tgaccggcag ccacatcccc ttcgatcgta atggcataaa aatcaataag agcgtcggcg
      421 aggtgctgaa atcggatgaa gccggcatta tccgcgaaat tgatcgggtg cgcgccgagg
      481 agtatagccg gacagcgacg acatcggcat tcgacccctg tggaatgtta aaatcctcgc
      541 tcgaattgcc gccgctcgat cgcaccgccg aaaaagcgta cgtccgtcgc tatctcagca
      601 gctttgatag cgccggcctc tccggtctgc gggttctcgt ctatcagcat tcggcggtgg
      661 ggcgcgatat cttgccgcgg atactgcaag agctcggtgc cgtggtgctt gccgccgggc
      721 gcagcgaaac gttcattccc atcgataccg aaaatatcac cgccgaacag ctcgattgtt
      781 tggaggagct cgccgtcgct gccgaagcga gcggttggcc gatccacgca atcgtgtcca
      841 cggacggtga ctccgatcgg ccattggtag cggccgtcct gcctgccacc gaagttcgac
      901 ctggcggccg gcgcgtgcgc ttcttgcccg gcgacctctt aggcctcgtt gttgccgagt
      961 atctgcgcgc ggatgcggca gcggttccaa tcagcgccaa cgatgcggtg gagcggcgct
     1021 tgcgcgagcg caaagtggtg ctggaaaaaa ccaagatcgg ctcgccctac gtcgtctccg
     1081 ccctcgacga actgcgcact gccggcactt acgaacgggt cgttggctgg gaagctaacg
     1141 gcggcttttt gaccggtaac gatatcgcgt tgaacaaggc gaccttggcg gcgctgccga
     1201 cgcgcgatgc cacgctgcct atactggcca atttgttcgc ggcggcggag cgaggaatga
     1261 gcttgaacgc tttatgggat ggcttgcccg cgcgttttgg acgggccggt ttgctcgata
     1321 atttccccgt cgccgtgagt caattcatcc tggcaaatct gattccggcc ggcgacgtaa
     1381 tcgaagtgga gttcgacggc gcggaacgtg ttctagatcg aagccgtgcg gatgctacgc
     1441 cggcgcccct cgcgcccagg ccagcggaag attggcgaga acggaaggca accctggcgc
     1501 gtttcttcac actcgcgctt ggattcgatg acatcgcgcg aatcaatgtt ctcgacggcg
     1561 tgcgtgccta tttcaagaac ggcgatgtcg cgcacatccg gccatcgggc aacgcgccgc
     1621 agctgcgcat ttatgccaac agagatttgc aggcgcgcgc cgatgaaatc gtcgaactcg
     1681 cagtcagcga acccaacggc attttgcgtg aaatcgaacg agcgtactct gaagatac
//
LOCUS       DATIRS010000090         3089 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1875112, whole genome shotgun sequence.
ACCESSION   DATIRS010000090 DATIRS010000000
VERSION     DATIRS010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3089
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1875112"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..805
                     /locus_tag="VLM90_01125"
     CDS             <1..805
                     /locus_tag="VLM90_01125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11583.1"
                     /translation="SIIAGNYIFNSGARDGSEIGMLNGAVILEQLFANPGVHFDMAKF
                     RYLAVPVNETYVMIVARQSGIAKFNDLVGSNAKQLTLGAIPNSTLEHAPILLREALEA
                     NLKVVSGYKGSADIRLAIDSGEIGGFFNPWSTVKPSSLDKFKNGDWSVIAQLADQPLA
                     DLPANSIPTIPELTKDENQRLLLRYGTSAPNQFGKVYMLPQGVPADRAAALEAAFAKT
                     LTDKSFLAEAEKGKLEITPIFAESIYKIVRDFLAMPPAIKTRLEKALKR"
     gene            complement(841..1827)
                     /locus_tag="VLM90_01130"
     CDS             complement(841..1827)
                     /locus_tag="VLM90_01130"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacid dehydrogenase"
                     /protein_id="HSQ11584.1"
                     /translation="MTLGRVLVEEFQPEGLQWLRDRVDLVVVNPWVEPQRWDIEVARV
                     DAVISRKGQITREHMEKGGGRLKIIARTGVGVDPSRVDLEAAKDLKVWVTNQPGSNAV
                     SVAELVFGQMIALVRHTHAADRAVKDNRWSDYLKFIGTELAGKSLGIVGMGNIGARMA
                     IRARAFEMAFLVYDPYIPESHVTALGGKWVGLNDLLSDADFVTIHCPLNRETRGMVGA
                     KELALMKPSAFLINMARGGIVDEVALCQTLQQGKIAGAALDVIAAEPPAKDHPLFKLD
                     NVLWTPHLGAVTLEASERGEWGAAEEVILVLESKRPKNPVVDADEARLLLPA"
     gene            1978..2946
                     /locus_tag="VLM90_01135"
     CDS             1978..2946
                     /locus_tag="VLM90_01135"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ11585.1"
                     /translation="MTRKFLYGLSVVLTLMLTLLAATNFAAAEKVRLALPSRSMGYLP
                     MFIALHRGFLKDENIELELPALLPNIAHNALLSGEVEYHGVADSALRLAAKGAPLKSI
                     FFSARLPNYFVMSKPAIRSVGELRGKLVAVSRFGGTTDLAARVALQANGLDPQKDVVL
                     IMIGLGNTRNAALIAGSVDANIANPPDNSMLKQKGFRELLFLGDAIEFPSNGFTTTER
                     RLAENRDQVKRLLRAFYRGLLFSRDNPEESIKIVEREWKLDAATARDSYQSIMKAASR
                     DGASSDAGLKVHIKLIQNSDKSIGDIALNKIVDFRVLEEVRRELSR"
BASE COUNT          662 a          973 c          827 g          627 t
ORIGIN      
        1 cagcatcatc gccggcaatt atatattcaa tagcggcgcc agggacggta gcgagatcgg
       61 catgctcaac ggcgcggtga tcttggaaca gctcttcgcc aatccaggcg ttcatttcga
      121 catggccaag ttccgctatc tggccgtgcc ggtcaacgaa acttatgtca tgatcgtcgc
      181 gcgccagtcg ggcatagcta aattcaacga cttggttgga agcaatgcca agcagctgac
      241 cctgggcgcg atccccaact cgaccctgga acacgcgccg atcctgttgc gcgaggcatt
      301 ggaggcaaat ctgaaagtcg tttcaggcta caaaggcagc gccgatatcc gcctggccat
      361 cgactccggt gagatcggcg gttttttcaa tccctggagc acggtcaaac cgagttcact
      421 ggataaattc aaaaacggcg actggtcggt catcgcccag ctcgccgatc aaccgttggc
      481 cgatctgcct gccaatagta ttccgactat ccctgaacta accaaagacg aaaaccagcg
      541 actgctatta cgctacggca ccagcgcgcc taatcagttc ggcaaagtgt atatgttgcc
      601 gcagggcgtg cccgccgacc gcgccgcggc cttggaagcg gcctttgcca agactctcac
      661 cgacaaatcg ttcttagctg aggcggaaaa aggcaagctg gaaatcaccc cgatcttcgc
      721 cgagtctatt tataaaatcg tccgcgactt cctcgccatg ccgccggcga tcaaaacacg
      781 attggaaaaa gccctgaagc ggtaagacaa acgttagcgg tgagggcctt acggttttgt
      841 ttacgccggc aatagcaatc gcgcttcatc cgcgtccacc accggattct tcggccgttt
      901 gctttcgagc acgagaatga cttcttcagc cgcgccccat tcgccgcgct cggaagcttc
      961 cagcgtcacc gcgcccaaat gcggcgtcca cagaacattg tcgagcttga acaacggatg
     1021 gtccttggcc ggcggctcgg cggcgatcac gtccaatgcc gcaccggcga tcttgccctg
     1081 ctgcaaggtc tggcacagcg ctacttcatc gacgatgccg ccgcgcgcca tattgataag
     1141 aaatgccgag ggcttcatca acgccaattc tttggcgccg accatgccgc gagtttcacg
     1201 attgagcggg cagtggatcg tcacgaaatc ggcgtccgac agaaggtcgt tgaggccaac
     1261 ccacttgccg cccagcgcgg tcacatggga ctcggggata taaggatcgt agacgagaaa
     1321 agccatctca aaagcgcgcg cccggatcgc catgcgcgca ccgatgttgc ccatgccgac
     1381 gatgccgaga gatttgccgg cgagctcggt gccgatgaat tttagataat cgctccagcg
     1441 attatctttg accgcgcggt cggccgcatg ggtgtggcgc accagcgcga tcatctggcc
     1501 gaacaccaac tcggcgaccg agacggcatt gctgcccggc tggttggtca cccaaacttt
     1561 gagatccttg gccgcctcca agtcgacccg cgacggatcg acgccgacgc cggtgcgagc
     1621 gatgattttc aaacgcccgc cgcctttttc catatgctcc cgggtgattt ggcccttacg
     1681 gctgatcacc gcgtcgacgc gcgccacttc tatatcccag cgctgcggct cgacccaggg
     1741 attgaccacc accaggtcaa cccgatcgcg caaccattgc aaaccttccg gttgaaactc
     1801 ctcgaccaat acacgcccca atgtcatatt tagtcctcca ctcggatctc gggttatcgt
     1861 cgtattttaa tctcggcggc ggcggatttc cacggcgaat cgaacggtga actgagttgc
     1921 ttcatagcaa gttctggtta tactaacgca aattcgtcgc cgacacggaa gcagaccatg
     1981 acccgcaaat ttctctatgg cttgagcgta gtccttaccc tgatgctaac cctcctggcc
     2041 gcaacaaact ttgctgcggc ggaaaaagtc cgtctcgcgc tgccgtcgcg ctccatgggt
     2101 tatctgccca tgttcatcgc cctgcaccgc ggtttcctca aagacgaaaa catcgaactc
     2161 gaactgccgg cgctgctgcc taacatcgct cacaacgcgc tgctgagcgg cgaggtcgaa
     2221 taccatggcg tcgccgactc ggcgctgcgc ctggcggcca aaggcgcgcc gttgaaatcg
     2281 atctttttca gcgcccggct gccgaattat ttcgtcatgt ccaagcccgc cattaggtcg
     2341 gtcggcgagt tgcgcggcaa attagtcgcc gtcagccgtt tcggcggcac caccgattta
     2401 gccgctcgag tcgcgctcca agccaacggc ctcgatccgc aaaaagatgt cgtcttgatc
     2461 atgatcggcc tgggtaacac gcgcaacgcc gcgctcatcg ccggctcggt ggacgccaac
     2521 atcgccaatc cgccggacaa ctccatgctc aagcaaaaag gctttcgcga gttgctgttt
     2581 cttggcgacg ccatcgagtt tcccagtaac ggctttacca ccaccgagcg ccggctggcg
     2641 gagaatcgcg atcaagtgaa gcggttgctg cgcgcctttt accgcggcct gctgttctcc
     2701 cgagacaacc ccgaagagtc gatcaagatc gtcgagcgcg aatggaagct cgatgcggcg
     2761 acggcacggg actcctatca atcgatcatg aaggccgcca gccgcgacgg cgcctcgtcc
     2821 gacgccggcc tgaaggtcca tatcaaattg atccagaact ccgacaaaag catcggtgac
     2881 atcgcgttga acaagatcgt cgacttccgc gtcctcgaag aggtccggcg cgaactctcc
     2941 cgatgaggac atggtcatga gaatattagt cctatttgcc ctattcgtcc tattccccct
     3001 tgaaactcgt gcgcaaacca tccgcaccgt ggtgccgcgg gcgacgctca attacttgag
     3061 cgtgccggta gccgaagcca gaggctttt
//
LOCUS       DATIRS010000091         1647 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_695606, whole genome shotgun sequence.
ACCESSION   DATIRS010000091 DATIRS010000000
VERSION     DATIRS010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1647
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_695606"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..199
                     /locus_tag="VLM90_01140"
     CDS             <1..199
                     /locus_tag="VLM90_01140"
                     /inference="COORDINATES: protein motif:HMM:NF024946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HSQ11586.1"
                     /translation="RTRKVSGFNDPRLRLSMLLYGAPALSLDEFRDYQPDFIVGSSVE
                     VTLPLGKYESDKLVNIGTNRW"
     gene            705..>1647
                     /locus_tag="VLM90_01145"
     CDS             705..>1647
                     /locus_tag="VLM90_01145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11587.1"
                     /translation="MLLLSSGYANAAQEKAAALPAPAAKAAAPEPVVPAPPVAIPLGD
                     IATRATEVSNLLGNLIASAAPGAQIETIAKTLPETSEKLDGQFAATTKTLEAEPTLDV
                     LQSLQQDWQRHELAAKGSLSALTLQATKLQQSLNQLTDLEKIWGNTRAAAQEAKAPDP
                     IVQQIDATLAAITAAQAKLQSERATLLDLQSRVAQGVTKCDTVLAQIGQIQQKAVAGI
                     FAANVPPIWSAEAWPDALKAFPDHVRRAGSAHWSEIVKYVRESREGSGLHAALFIVLA
                     LLFSAARRKFALWEKSGVAASSVISVFERPYAAALAMT"
BASE COUNT          339 a          481 c          498 g          329 t
ORIGIN      
        1 gcgcacgcgg aaggtttccg gattcaacga tccgcgacta cggctctcga tgttgcttta
       61 cggcgcgccg gcgctctcgc ttgatgaatt ccgcgattat cagccggatt tcattgtcgg
      121 ttccagcgta gaagtgactc tgccactcgg aaaatacgaa tccgacaagc tcgtcaacat
      181 cggcaccaat cgctggtagt tcaagccgga gctgggagtt tcaaaaacct ggggtccggt
      241 gacgttggag gtcgccggcg gcttccgttt ctacactgac aacaacgatt ttctcgacgg
      301 caaaaccctc caagtccgtc cagtctattc cgtgcaagga catttgattt actcgatcac
      361 gcccgggatt tggctcgggt tcgatgcgct ttactacacg gggggcgcgg gactatcgac
      421 ggcgacaagg gagaaagcct tgagaatgtc cgtgtcggcc tcaccctggc gctgccgatt
      481 aatcgctaca actcgatcaa actctacggc agcaccaatg cctatgccaa gactggagcg
      541 gatctagacg tgctcggcgt tgcatggcaa ctccgatggg gggcgggctg tagttgccgg
      601 atctcactcc attctgaata cggctctact cgatgtgccg attgcgaggt ttaacaagaa
      661 tgcgcgcaag acatactttt gctacgactg tcatactagc gttcatgctg ttgctatcga
      721 gcggctacgc taacgcagcg caggaaaaag ccgccgcttt gccggcgccc gcggctaagg
      781 ctgcggcgcc tgaacctgtc gtgccagcgc caccggtggc gatcccgctg ggggatatcg
      841 cgacgcgggc cactgaagta tccaatttac tgggtaattt gatcgcgagc gcggcgcccg
      901 gcgcgcaaat cgaaaccatc gccaagaccc ttcctgaaac gagcgaaaag ttggacgggc
      961 aattcgccgc gacgaccaag actttagaag cggaacctac cctcgatgtt ttgcagagct
     1021 tgcagcagga ttggcagcgc cacgaattgg cagcgaaggg ctccttgagc gcgctcaccc
     1081 tgcaggcgac caaactgcag cagtcactga atcaacttac cgatctggaa aaaatctggg
     1141 gcaacacgcg cgcggcggcg caggaagcca aggctccgga tccgatcgtg caacagatcg
     1201 acgccacgct ggcggcgatt acggcggcgc aggcgaaact tcaaagcgag cgtgcgacgc
     1261 tgttggatct gcagagccgc gtcgcccagg gtgtgaccaa gtgcgacacg gtgctggcgc
     1321 agatcggcca gattcagcag aaagccgttg ccgggatttt cgcggccaat gtaccgccga
     1381 tctggagcgc ggaagcgtgg ccggacgcgc tcaaagcctt ccccgatcat gtgcgccgcg
     1441 ccggtagcgc ccattggtcg gagatcgtta agtacgtacg tgagtcgcgc gagggcagcg
     1501 gtctacacgc cgcgctcttc atcgtcttag ccctgctgtt ctctgcggcg cggcgcaagt
     1561 tcgctctgtg ggagaagtct ggcgttgctg catcgtcggt gatctcggtt ttcgaacgac
     1621 cctacgcggc ggcgttggcc atgacgt
//
LOCUS       DATIRS010000092         1548 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1580404, whole genome shotgun sequence.
ACCESSION   DATIRS010000092 DATIRS010000000
VERSION     DATIRS010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1548
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1580404"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..376)
                     /locus_tag="VLM90_01150"
     CDS             complement(<1..376)
                     /locus_tag="VLM90_01150"
                     /inference="COORDINATES: protein motif:HMM:NF012670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11588.1"
                     /translation="MNQSIDQLSINTIRTLSMDAVQQANSGHPGTPMSMAPVMYGLWQ
                     RHLKYDPADPLWPNRDRFVLSIGHASMLLYSTLYLAGVRALDAHHQVLNQPTLTLDDL
                     KNFRQLDSKTPGHPEFGLTAGVE"
     gene            complement(519..1214)
                     /locus_tag="VLM90_01155"
     CDS             complement(519..1214)
                     /locus_tag="VLM90_01155"
                     /inference="COORDINATES: protein motif:HMM:TIGR04282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04282 family arsenosugar biosynthesis
                     glycosyltransferase"
                     /protein_id="HSQ11589.1"
                     /translation="MPTHVNALAILAKAPVAGSVKTRLVPPLTPAQAAELCRALLLDQ
                     FDHLRNFASAARYVFYTPVDAENILRELAGAGYVYLAQSDGDLGARMAQVFADLWHLG
                     HRNIVLIGSDLPALPWAILDEAISRLAKAERRVVLGPSLDGGYYLVGMNRPTPEIFAN
                     MAWSHDRVFADTIARLDALSLPYSVLPTWFDLDVAEDFQRLWQLPKSELRAGLSRTLA
                     CLEKLGFSPASKV"
     gene            complement(1198..>1548)
                     /locus_tag="VLM90_01160"
     CDS             complement(1198..>1548)
                     /locus_tag="VLM90_01160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11590.1"
                     /translation="ELDGKHWLLPLVGRLISYRSRLSKVATGDQALFVRRAVFERMGG
                     FADIPLMEDIAFCRRLKGLGEVACLRSRVVTSARRWEVDGLWRTIFRMWTLKLLYLTG
                     VSPARLKQFYADTR"
BASE COUNT          351 a          470 c          440 g          287 t
ORIGIN      
        1 tctcgacgcc ggcggtgaga ccgaactccg gatggccggg cgtcttactg tcgagttggc
       61 gaaaattttt cagatcgtcg agagtaagcg tcggctgatt gagcacttga tgatgtgcat
      121 ccagcgcgcg cacgccggcc aaatacaacg tcgaatagag caacatcgag gcatggccga
      181 tggacagcac gaagcggtcg cgattgggcc acagcggatc ggcggggtca tattttaaat
      241 ggcgctgcca caggccgtac atcaccggcg ccatcgacat cggcgtgccg gggtgaccgg
      301 agttggcctg ctgcaccgcg tccatcgaca aagtgcggat ggtattgatg gacaactgat
      361 cgatcgactg gttcatagga tctgcctgtt ctaaccggag cgttccggac gggttggtcg
      421 catatgtatc tgcattactt ttatcacttt cgttcgccca ggtcagcaac atattcgaac
      481 taatcgacag tttgtcatta aagtgtaacc tgccaccgtc agacttttga cgcaggtgaa
      541 aagcccaact tttccaagca agccaaggtc cggctcagcc ctgcgcgcaa ctccgacttc
      601 ggcaattgcc acaatcgttg aaaatcttcg gccacgtcga ggtcgaacca agtcggcagc
      661 acgctatagg gcaggctaag cgcgtcgagt cgcgcgatcg tgtcagcgaa aacccggtcg
      721 tggctccagg ccatgttggc gaatatctcc ggcgtcggtc gattcatgcc gacaagataa
      781 tagccgccgt ccaggctcgg tcccaagacc acccgccgct ccgctttcgc caaccgacta
      841 attgcttcgt caagaatcgc ccaaggcaaa gccggcaaat cgctgccgat aagaacgatg
      901 ttacgatgtc ccaggtgcca aagatcggcg aagacttgcg ccatgcgcgc gccgagatcg
      961 ccatcggatt gcgccagata aacataaccg gcgccggcga gttcccgcag aatattttcg
     1021 gcgtcaaccg gtgtgtaaaa cacatagcgc gcggcgctcg cgaaatttct caaatggtcg
     1081 aactgatcga gcagcagcgc gcgacagagc tccgccgcct gcgccggcgt caacggcggc
     1141 accaagcggg tcttcaccga tcccgccacc ggtgccttgg ccaggatggc aagcgcgtta
     1201 acgtgtgtcg gcatagaact gtttcaaacg ggccggcgaa acaccggtga gatagagtag
     1261 cttcagagtc cacatgcgaa aaatcgtccg ccacaagccg tccacttccc aacggcgcgc
     1321 cgaggtcacc acccggctgc gcaggcaggc gacttcgccc agccccttga gccgacggca
     1381 gaacgcgatg tcttccatca gtggaatgtc cgcgaaaccg cccatgcgct cgaacactgc
     1441 gcggcgcacg aacaacgcct gatcgccagt agcgactttg gatagccgcg agcggtagct
     1501 gatcagccga ccgaccagcg gcaacagcca gtgtttacca tcgagctc
//
LOCUS       DATIRS010000093         1875 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1777239, whole genome shotgun sequence.
ACCESSION   DATIRS010000093 DATIRS010000000
VERSION     DATIRS010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1875)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1875)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1875
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1777239"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..328
                     /locus_tag="VLM90_01165"
     CDS             <1..328
                     /locus_tag="VLM90_01165"
                     /inference="COORDINATES: protein motif:HMM:NF012379.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HSQ11591.1"
                     /translation="YPKAIKAFYMRVNDDDKTDRAMDVLVPRVGEIIGGSQREERHDV
                     LTQRLRDSGLDEKPYWWYLDLRRYGSVPHAGFGIGLERMMMYLTGLKNIRDVIPFPRT
                     PGNAEF"
     gene            472..1737
                     /locus_tag="VLM90_01170"
     CDS             472..1737
                     /locus_tag="VLM90_01170"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ11592.1"
                     /translation="MLAKLSGLYYGWRMVAVASALRVLGAGLHSFGFTVFFLPLSQDL
                     NINRTATSLAFSLARAEGAIEGPIVGHLLDRYGPKPIMLTAALLMGIGYLILSQVDSY
                     ASFLVVYLGIISLVHAGGFMHAPMVLINTWFIRQRARAITLNSAAFGLGGVLIAPLLS
                     LVVQAWGWRWGAVVAGMTFLVFGIPICLTIRRSPESMGLLPDGDAPANPAADGDSDGH
                     APLIEAEVTLAQALRSFAFWGSVLASGVRNAYYHAVSVHFIPLMIWKGLSQQEAAWLL
                     SAFAFLGMASTLIFGWYADRAHKPRLCAMILFSAALAMMLPIYTSSFWLMALFTMLFA
                     GVEATYTVGWAIAGDLFGRKHFAKIRGYMGLFYTWGGVLGPVLAGAVFDRWQTYQPLL
                     WALIGVFAGAGIFFASLSNSWSRATGRLQ"
BASE COUNT          336 a          571 c          524 g          444 t
ORIGIN      
        1 ctatccgaaa gccatcaaag ccttttacat gcgcgtcaac gacgacgaca aaaccgaccg
       61 cgccatggac gtgctcgtgc cgcgggtcgg cgagatcatc ggcggcagcc agcgcgagga
      121 gcgccatgat gttttaaccc aacggctgcg cgacagcggc ttggacgaaa aaccctactg
      181 gtggtacctc gacctgcgcc gttacggctc ggtgccccac gccggcttcg gtatcggcct
      241 cgaacgcatg atgatgtacc tgaccgggct gaaaaacatt cgcgacgtca tccccttccc
      301 gcgcacgcca ggcaacgcgg aattttaatt ccgcggcttc aaagttaaga agttcaaggc
      361 agaatcggat ttccaacgtt gaaccttgta aagttcttcc ctttgcagac aacctcgtgc
      421 taagtcagat gtgattcgtg aagtgccaat tcgccagaca ggacaatttt cttgctcgct
      481 aaactctccg ggctttacta cggctggcgc atggtcgccg tcgcctcggc gctgcgcgtg
      541 ctcggtgccg ggctgcatag ctttggcttc acggtgttct ttttgccact tagccaagac
      601 ttgaacatca atcgcacagc gacgtctctg gctttttccc tggcgcgcgc cgagggcgcc
      661 atcgaaggcc ccatcgtcgg ccacctgctc gaccgttacg gtcccaagcc gatcatgcta
      721 acggccgcgt tgctcatggg aataggttac ttgatcctct cccaggtcga cagctacgcg
      781 agttttttag tcgtctacct cggcatcatt tcactggtcc atgccggcgg cttcatgcat
      841 gcgccgatgg tgttgatcaa cacctggttc atccgccaac gcgcccgcgc gatcacattg
      901 aacagcgccg ccttcggcct cggcggcgtg ctgatcgcgc cgctcttaag cctggtcgtt
      961 caagcctggg gttggcgttg gggcgcggtg gtagccggca tgacctttct agtcttcggt
     1021 ataccgatat gtttgaccat acgccgttca ccggagagca tgggcctgtt gcccgacggc
     1081 gacgcaccgg cgaaccccgc ggcggacggc gacagcgacg gtcacgcgcc gctcatcgag
     1141 gcggaagtga cattagccca agcactgcgc tcctttgctt tctggggctc ggtactggcc
     1201 agcggcgtgc gcaacgccta ttaccacgcg gtgtccgtcc atttcattcc gttgatgatt
     1261 tggaaagggc tgagccagca ggaagccgct tggttgctga gcgccttcgc ctttctcggc
     1321 atggcatcaa cgctgatttt tggttggtat gccgaccgcg cccataagcc gcgtttatgc
     1381 gcgatgatat tattcagtgc cgccctcgcc atgatgttgc cgatttatac cagctcgttc
     1441 tggctcatgg cgcttttcac catgctgttc gccggggtgg aagccaccta caccgtcggc
     1501 tgggcgatcg ccggcgattt attcggccgc aaacacttcg ccaagattcg cggctacatg
     1561 ggactgtttt acacctgggg cggcgtcttg ggaccggtgt tggccggcgc cgtgttcgat
     1621 cgctggcaaa cttaccagcc gttgctctgg gcgctgatcg gcgtcttcgc cggcgctggg
     1681 attttcttcg ccagtctgtc caattcctgg tcccgcgcca ccggccgcct gcaatgaaaa
     1741 ttaagttggt gtcacagttg tattacaatc acaggattgt tttaccccga aggcacgaag
     1801 gacacgaagt tcgccatata tttcctccga aaccttcgtg ctcttcgtgc cttcgtggtg
     1861 taaatcgatg tttat
//
LOCUS       DATIRS010000094         3175 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_302446, whole genome shotgun sequence.
ACCESSION   DATIRS010000094 DATIRS010000000
VERSION     DATIRS010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3175
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_302446"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            172..262
                     /locus_tag="VLM90_01175"
     tRNA            172..262
                     /locus_tag="VLM90_01175"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:206..208,aa:Ser,seq:gga)
     gene            416..513
                     /gene="ffs"
                     /locus_tag="VLM90_01180"
     ncRNA           416..513
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="VLM90_01180"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            626..2311
                     /gene="dnaX"
                     /locus_tag="VLM90_01185"
     CDS             626..2311
                     /gene="dnaX"
                     /locus_tag="VLM90_01185"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF004046.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HSQ11593.1"
                     /translation="MPYLVLARKWRPQNFEDIAGQEPITRTLKNAIKANRIAHAYLFT
                     GVRGVGKTTAARILAKALNCQKGPTATPCNQCSHCEEITSGSSIDVLEIDGASNRGID
                     EIRQIIENVRYQPAKCRFKIYIIDEVHQVTKDAFNALLKTLEEPPPSVKFILATTEPQ
                     RLPETILSRCQRYDFRRISLREIVERLSAIGKSEGLRITDEALVLLAREADGSMRDAQ
                     SLLEQVLACAMPAAGDEQQTTVDATLLQEILGLAERKCLYDLSQAVLDGDPRRCVELI
                     AEVMNQGRDLSRLCRDLVEHFRNLLVARLSASPVGAARVGGADMAQLLDIPDQEIADL
                     FRQSSPVSVDSLLDYLDFIAAGDDEVARSATPRFALEAVLIRMASLPQSLPVTEILTR
                     LEGLEGRVSGEVRSQVAAQRPKSVTIAAPVTKPGVTAALETVPPAGDDASIWREFVTF
                     VGKEKKLIASQLATSAALSLPPAPLKVSVAERHQLGFLNDADNLAALRESAKRFFGVD
                     VTIQLVAAAVDAAPLASSDTARTDGAVEDRSEMVKEALRIFGGSVRSVRRENP"
     gene            2356..2679
                     /locus_tag="VLM90_01190"
     CDS             2356..2679
                     /locus_tag="VLM90_01190"
                     /inference="COORDINATES: protein motif:HMM:TIGR00103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HSQ11594.1"
                     /translation="MASIPGMGNLLKQAQDMQARMAKVQEELAHKTVDGSAGGGMVQV
                     TVNGQFNLTAVKIEPSVISVEEKSMLEDLVLAAVNDGMRKAREMASAEMAKLTGGFKI
                     PGLMP"
     gene            2770..>3175
                     /locus_tag="VLM90_01195"
     CDS             2770..>3175
                     /locus_tag="VLM90_01195"
                     /inference="COORDINATES: protein motif:HMM:NF025044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HSQ11595.1"
                     /translation="MSMYPAPLARLIQELSKLPGVGEKSAARLAFHMLKGKRDDVFRL
                     ADSIGRLRQEMGLCDRCFGFSEVHAHNEDGTQCDVCRNSDREDDKICVVEEPADMIAV
                     EKSQEYRGQYHVLHGTISPLDGVGPDALRIKEL"
BASE COUNT          663 a          872 c          984 g          656 t
ORIGIN      
        1 atggtttaaa atcccgtgtc tcgcattctg tctttgctac tgcgaaagct tgtgttaact
       61 tctgaaacaa cagctcagca aaacgaccca aaaaaactcc gtggagacat tttgcagaca
      121 ttgacggtcg aaccagcgga gcaggggcgt aagttctcaa tatgccaata gggagaggtg
      181 gccgagcggt tgaaggcgca cgactggaaa tcgtgtgtac cccaaaaggg taccgagggt
      241 tcgaatccct ccctctccgc catggttcct gaatctggcg ggctcaccgg tcgctttcga
      301 ttaaggcggc cgcggcaagc aggaaatctt gaaaccgccc ggtgatcaag gtactgtttt
      361 tcaagaagcg tcggattagg cgatgtttgg ttgtgtgcgg atgtcgagtg ctgatagtta
      421 ggtcctgtgc aaggcggccc cgtgaactcc gtcaggtccg gaaggaagca gcggtaacgg
      481 ctctcccctg tgccacaggg gcacctggct gtcagcactg ggcatcctca cctcgtggct
      541 ctctaattgt ataatcgccg atcgccgctc ttgtgcagat cgctgagagt cggcggcttt
      601 tagtttgaga tcacccaagg aatttatgcc ttacctggtt ttggcgcgaa aatggcggcc
      661 acaaaatttc gaggatatcg ccggccagga accgatcacc cgcacactca aaaatgccat
      721 caaggcgaac cgcatcgctc atgcctacct gttcaccggc gtgcgtggtg tcggtaaaac
      781 caccgcggcg cggatccttg ccaaagcatt aaattgtcag aaggggccca ccgcgacgcc
      841 gtgcaaccaa tgcagccatt gtgaagagat caccagcggc agctcgatag atgtgcttga
      901 gatcgacggc gcgtcgaacc gtggcatcga cgagatccgc caaatcatcg aaaacgtccg
      961 ttaccagccg gccaagtgcc gtttcaagat ctatatcatc gacgaagtac atcaggttac
     1021 caaggatgct ttcaacgcct tgctgaaaac cttggaagag ccgccgccgt cggtcaagtt
     1081 tatccttgcg accactgagc cgcagcgtct gcccgaaacg attttgtcgc gttgccagcg
     1141 ctatgatttt cgccgtatca gcctgcgcga gatcgtcgag cggttgtccg ccatcggtaa
     1201 aagcgaaggt ctgcgcatca ccgatgaggc gctggtgttg ctggcgcgcg aagcggacgg
     1261 cagcatgcgc gacgcccagt cgctgttgga acaggtgctc gcctgcgcca tgccggcggc
     1321 gggcgacgag cagcagacga cggtggacgc taccttgttg caagaaattc ttggcttggc
     1381 cgagcgtaag tgtctctacg acttgtccca ggcggtgctc gacggcgacc cgcgccggtg
     1441 cgtcgaactg atcgccgagg tgatgaatca ggggcgggat ttgagccggt tgtgccgcga
     1501 tctggtggag cattttagga atttgctagt cgctcgcttg tccgccagcc cggtgggcgc
     1561 agcgcgcgtc ggtggcgccg acatggcgca actactcgat atccctgacc aggagattgc
     1621 cgatttattc cgccagagca gtccggtgtc ggttgattcg ctgctcgatt acctcgattt
     1681 tatcgctgcc ggcgatgacg aggtggcgcg ctcggcgacg ccacgcttcg ccctcgaagc
     1741 ggtgctgatc cgcatggcga gtctgccgca gtcgttgccg gtcacggaaa ttctcacccg
     1801 gctcgaaggt ttagaggggc gggtatctgg cgaagtacgg tcccaagttg cggcgcagcg
     1861 acccaagtct gtcacgatag ccgcgccggt aaccaaaccg ggtgtcacgg cggcgctgga
     1921 aaccgtccca ccggcgggtg acgatgcttc gatatggcgc gagtttgtga cctttgtcgg
     1981 caaggagaaa aagcttatag cgtcgcaatt ggccaccagt gcggcgctct cgttaccgcc
     2041 ggcgccgctc aaagtcagtg tcgccgagcg gcatcaattg ggctttctca atgacgccga
     2101 taatcttgcg gcgctgcggg agtcggccaa gaggtttttc ggtgtcgatg tcacgattca
     2161 gttggtcgct gctgctgtcg acgccgcgcc actggccagt tcggacaccg cccgcactga
     2221 tggggcggtg gaggaccgta gcgaaatggt caaggaagcg ttgcgcattt ttggcggttc
     2281 agtgcgttcg gtgcggcggg aaaatcccta agccgatcag ccagcgcggc tcagcgctga
     2341 agtaggaggc aaagcatggc gagcattccg ggaatgggta atctgctcaa gcaagcgcag
     2401 gatatgcagg cgcgcatggc caaggttcag gaggagctgg cgcataagac cgtcgacggt
     2461 tccgccggcg gcggcatggt tcaggtgacg gtgaacggcc agttcaacct gaccgctgta
     2521 aagatcgaac cgtcggtgat cagcgttgaa gaaaagagca tgctcgaaga tctagttctc
     2581 gccgccgtca atgacggcat gcgtaaagct cgcgagatgg catcggcgga gatggccaag
     2641 ctcaccggcg gttttaagat tcccgggctg atgccgtagt ttttttcaga gacttgtggc
     2701 cacgacagat aagtcaacag cgagcatgaa aatattgaac atcgctgcct cgccaagcga
     2761 ggcccgctca tgagcatgta tcccgcgcct ttggcccgct tgattcaaga actttccaag
     2821 ttgccgggtg tcggtgaaaa atcggcggcg cgtttagcgt ttcacatgtt gaagggcaaa
     2881 cgggacgacg tctttcgtct cgccgacagc atcggccggt tgcgccagga aatggggctg
     2941 tgcgaccgct gtttcggctt cagcgaagtc cacgcgcaca acgaagatgg cacgcagtgc
     3001 gacgtttgcc gtaactcgga tcgcgaggac gacaaaattt gcgtggtcga agagccggcg
     3061 gacatgattg cggtggaaaa gtcccaagaa taccgcggcc agtatcatgt gttgcatggc
     3121 acgatctcgc cgctcgacgg tgtcggtccc gacgcgctgc gcatcaagga actgc
//
LOCUS       DATIRS010000095         1878 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1679116, whole genome shotgun sequence.
ACCESSION   DATIRS010000095 DATIRS010000000
VERSION     DATIRS010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1878)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1878)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1878
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1679116"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(359..1789)
                     /locus_tag="VLM90_01200"
     CDS             complement(359..1789)
                     /locus_tag="VLM90_01200"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ11596.1"
                     /translation="MAKDCRSLLGQSSVAIACLSALLGSLDSAINIGFPAITAAFSLE
                     VTAIQWVIVGYVLTHASLLPGCGGLADIWGHGRVLICGLLVSALGFTACGLATNYAWL
                     VGGRIGQGMGAALVFATAPALVTLALPAENRGRALGIYQMSNAMGYAIGPLIGGILID
                     NLSWRATFMFRVAPALVLAGFAAVKLPVRRERRAGQGFNFFGVLSLAASLAGCLLTLS
                     QGRALGWSSPRVSILAAASIASFAGFIVVKARAKSPMVDLTVIRLAPFIIANVLSVMA
                     NCARFAIGLLLPFYVINVLQYPATTGGTLMLATYLPTIVAAPLAGKLSERIGTARLSS
                     LGLAVQGLGLCMLSRLNGQTDYLSLAFTLGVVGLGLGIFEAPNMSFIMGSIPRTQQGV
                     AGGIANMMRPIGIVFGAAGWSLLFDQRQQSYAPASAVASSVAASGMLAALQDVFLSAA
                     GLCFVACVLSLFRKGEASESNVHAVS"
BASE COUNT          459 a          537 c          543 g          339 t
ORIGIN      
        1 caaccgctcg gccatcggat cacggcaatg ggcaaatcgg atgcgacgtt ttgtcagaaa
       61 cccttacaac ccgaactgct cggcacctca gacaacggct cccccatttg accctgcgca
      121 aagtctgttt ggagtggctc aactacgttg tcgtgtttgt ccgtcgctgt ggcgtccgtg
      181 ccgtggctct gccctggtgg cgtttgagca gcaagctgga ttcatcgtcg gttcctaaat
      241 tgcggctata tcggctttcg tgatgaataa atcggtagcc tgcgcgttaa cttgaatctc
      301 tcaaaaatgt ttgactgaag ttctgatcgg gttcgacggc gctttgcttt tcttcgcttc
      361 agctcactgc atgaacattc gattcactgg cttccccttt gcggaacagt gacaagacac
      421 aggcgacaaa acagagtccg gcggcactga ggaaaacatc ctgcagcgcc gctaacatgc
      481 cgctggcggc caccgacgat gcgacggcag atgctggcgc ataggattgc tggcgttggt
      541 cgaagagcag actccagccg gcggcgccga agacgatgcc aatgggccgc atcatgttgg
      601 cgatgccgcc ggcgacgcct tgttgggtac gcgggatcga gcccatgata aagctcatgt
      661 tcggcgcttc gaatatgccc aggcccaaac cgacgacgcc aagggtaaag gctagggata
      721 gataatcggt ttgcccattc aaacggctga gcatgcagag accgagccct tgcacagcca
      781 gccccaacga acttagtcgc gcagtgccga tgcgctcgga caatttcccc gccagtggtg
      841 cagctacgat cgtcggtaaa taagtagcca acatcagagt gccgccggtg gtggccggat
      901 actgcaacac attgatcacg tagaacggca ggagcaagcc aatggcgaat cgcgcgcaat
      961 tggccataac ggagagaaca ttagcgataa taaatggtgc cagccgaatt accgtcagat
     1021 cgaccatcgg cgatttcgca cgagctttga cgacgatgaa gccggcaaaa cttgcgatag
     1081 aagcggcagc gagaatggag actcgaggcg atgaccagcc caaggcgcgg ccctggctta
     1141 gagtgagcaa gcaaccggcg aggctcgctg ctaaagacaa cacgccaaaa aaattgaagc
     1201 cttggccggc tctgcgctcg cgtcgcaccg gcagctttac ggccgcgaag ccggcgagta
     1261 ccagagcggg tgcgaccctg aacatgaaag tcgcccgcca actcaagttg tcgatgagga
     1321 taccaccgat caacggaccg atggcatagc ccatggcgtt gctcatctgg taaatgccga
     1381 gagcacggcc gcggttttca gcggggagcg ccaaggtcac aagcgccgga gcggtggcga
     1441 aaaccagcgc cgcgcccatg ccctgtccta tccgtccgcc gacgagccaa gcatagttgg
     1501 tcgctaaacc gcaggcggtg aaaccaaggg cgctgacaag caagccgcaa ataagtaccc
     1561 gcccatgacc ccagatatcc gccagcccgc cgcagccagg cagcaagctc gcgtgagtca
     1621 acacatagcc gacgatgacc cattggatcg ccgtgacttc gagagagaac gccgcggtaa
     1681 tcgctggaaa gccgatattg atggcgctat cgagggaacc caatagtgcg ctcaggcatg
     1741 cgatcgcgac tgaactttga ccgagtagcg agcgacaatc ttttgccaag aaacatcctg
     1801 aggagatagt tagtcggatt attcagcgca gggacgcagg ccacgcagag aaaaattagc
     1861 agaaaaacct ccgggtcc
//
LOCUS       DATIRS010000096         1602 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1679735, whole genome shotgun sequence.
ACCESSION   DATIRS010000096 DATIRS010000000
VERSION     DATIRS010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1679735"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1009
                     /locus_tag="VLM90_01205"
     CDS             <1..1009
                     /locus_tag="VLM90_01205"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HSQ11597.1"
                     /translation="AITTLARAVLLFVLPLASAQAGPTADGALKKGFIQCGVNIGLAG
                     FAQPDSNGEWRGIDVDLCRAVAAALFGDAKKNRYTPLTAQQRFTALQSGEVDILSRHT
                     TWTFARDAGLGLNFVGVNFYDGQGFMVTKKRNIKSAKQLNGAAICVQPGTTTELNRAD
                     YFRTNKMKFKPVVIEKLEEVLNAYFTGRCDVFTTDVSGLVAVRAARATNPADHVILPE
                     VISKEPFGPVVRHGDDHWHDLVRWTLFAMIEAEELGLTSKNIDQQAQNANPVVQRFVG
                     ATGDFGKMLNVDNRWAYNIVKQVGNYGESFERHLTPLGLDRGINKLWNKGGIMYAPPL
                     R"
     gene            1045..>1602
                     /locus_tag="VLM90_01210"
     CDS             1045..>1602
                     /locus_tag="VLM90_01210"
                     /inference="COORDINATES: protein motif:HMM:TIGR01726.1"
                     /note="The N-terminal region of this protein, as described
                     by TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_process: GO:0015837 - amine transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSQ11598.1"
                     /translation="MARQLDTRQRAALYQILLVAAICLVGWYFIRNAVDNLLARRIAS
                     GFGFLFREAGFEIGESTLVSFSAADSYLKALTVGLLNTFRVALLAVVFSTFIGVAVGL
                     ARLSPNWLLAKLASGYVELLRNIPLVVQLFFWYAVITESLPAPAQALTPLPGIYLSHR
                     GLAVPTVASLLPFEVEYPSLSGFNFS"
BASE COUNT          317 a          513 c          442 g          330 t
ORIGIN      
        1 cgcaataacc actttagcga gggcagtgct gctctttgtc ctgccgctcg ccagcgccca
       61 ggccggaccg accgccgatg gcgctctcaa gaaaggcttt attcagtgcg gcgtcaacat
      121 cggcctcgcc ggcttcgccc agcccgatag caatggtgaa tggcgcggca tcgacgtgga
      181 cttatgccgg gccgtggccg cggcgctgtt cggcgatgcc aagaaaaacc gctacacacc
      241 gctcaccgcc cagcaacgct tcaccgcctt gcagtcgggc gaggtcgata ttctctcgcg
      301 ccacaccacc tggaccttcg cgcgcgacgc cggcctcggc ctcaacttcg tcggggtcaa
      361 tttctacgat ggccaaggct tcatggtgac aaaaaaacgc aacatcaaaa gcgccaagca
      421 attgaacggt gccgccatct gcgtgcagcc cggcaccacc accgaactta atagggccga
      481 ctacttccgc accaataaga tgaagttcaa accggtagtc atcgaaaagc tcgaagaggt
      541 gttgaacgcc tatttcaccg gccgttgcga tgtctttacc accgacgtct ccggattagt
      601 cgccgtgcgc gcggcgcggg cgactaatcc ggccgatcat gtgatcttgc cggaggtgat
      661 ttccaaggaa cccttcggtc cggtggtgcg ccatggtgac gaccattggc atgacctcgt
      721 caggtggaca ctgttcgcca tgatcgaagc cgaagagctc ggcctgacct cgaaaaacat
      781 cgaccagcaa gcgcaaaacg ccaacccggt ggtgcagaga ttcgtcggcg ccaccggcga
      841 cttcggcaag atgctcaacg tcgacaaccg ctgggcttac aacatcgtaa aacaagtcgg
      901 taactacggc gaaagcttcg agcgccatct aaccccgctg ggtctcgacc gcggcatcaa
      961 caagctatgg aacaagggcg gcatcatgta cgcgccgcca ttgcgctaag ccggctatag
     1021 acactgcgaa agcggcaatt cccgatggcc cggcaactcg acacccgcca gcgcgccgcg
     1081 ctctatcaaa tcctcttggt ggccgccatc tgccttgtcg gctggtattt cattcgtaat
     1141 gcggtggaca acctgctggc gcgccgtatc gccagtggct ttggctttct gtttcgcgag
     1201 gccggctttg agatcggcga gagcactctg gtctccttca gcgccgccga tagttacttg
     1261 aaggcgctca ccgtcggact gctcaacacc ttccgggtag cgctgctcgc cgtggttttt
     1321 tcgactttca tcggcgttgc cgtcggatta gcgcgtctgt cgcccaactg gctgttggct
     1381 aagctcgcgt ctggatatgt cgaactgctg cgcaatattc ccctagttgt gcagctattt
     1441 ttttggtacg ccgtgatcac cgaaagcctg ccggcgccgg cccaggcgtt gactcccttg
     1501 ccgggaatct atctcagcca ccgcggcctg gcggtgccaa cggtcgctag cctgctccca
     1561 ttcgaagtgg aatatcccag cctctcggga ttcaattttt cc
//
LOCUS       DATIRS010000097         2804 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1679740, whole genome shotgun sequence.
ACCESSION   DATIRS010000097 DATIRS010000000
VERSION     DATIRS010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2804)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2804)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2804
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1679740"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1164
                     /locus_tag="VLM90_01215"
     CDS             <1..1164
                     /locus_tag="VLM90_01215"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSQ11599.1"
                     /translation="MRELRRERDLVFVDIRGTGDSNGLQCSFPIDRADVQNFFLDLFD
                     PVRVQACREKLEQTADLRYYTTPLGIEDLEEIRSALGYDKINLYGISYGSLAALEYVR
                     RYSDHVRSAVLAGVAAPTAKLPLQFALAAQQAMTRLFHDCAADVVCASAYPNLTDSFG
                     RILDGFIPGTVNFEVAHPVSKAIQTVALSHGVFARQVVSLLYSHRTASLLPLIIDSAA
                     KGNWSPYVRILTRSAPAPEFGVFLGAYFSATCAESIPFIDESELERATTGTFLGDYRT
                     RQHQQVCAYWPRGAIDPDYHTPVRAAAPVLMLSGDIDPATPAEFGAQVLKSLPNGRQV
                     ILRSTPHSYASPCARDQIVAFITNGSAKELDASCAARLRRPPFATELPARYNR"
     gene            1248..1646
                     /locus_tag="VLM90_01220"
     CDS             1248..1646
                     /locus_tag="VLM90_01220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11600.1"
                     /translation="MLKLAAMLLFLVMTGGCAENVDHDTALATKRAIEFAEATFVRGN
                     LDQGYAMLADKARAYVPLNIFADKVKQMHPSGRPSKIASLTAAPIKGEKIVNVTLRGE
                     GDGQFMYGIALIGTSAADYRVSTFSGGRSP"
     gene            complement(1647..2744)
                     /locus_tag="VLM90_01225"
     CDS             complement(1647..2744)
                     /locus_tag="VLM90_01225"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ11601.1"
                     /translation="MAKLINFIRLRHLTSLNYWKFYVIISGAMTIAALTVFSPPSVNG
                     QPLQKSVAMVGARSGASWPLWIAKETRLYAKYGLDVELVYAVHPAPIAAVITGHAAMT
                     SSGGDPALLAAAKDPSLVVLGGFMNKASFSMIGSKSANDMKQLAGKKIGVGRVGDPPY
                     HMAVSLLRKFHLTARDVQWVSIGVDAAARAAALQSGLVYAALITAPAYFRLQAAGLPV
                     LAVLLDHDDIYVSTYYLFRRDALGKERPAALAYIKAHAEAIKRFYDDKAYAADVMIKY
                     GGTRDRDDANRVYDLFRKARVLEAVPYALKGSIDAVIERQGADLKGIDLSKMIDNSLV
                     DQLVKEKYFETVFGPSIRDEQQRRQAHAFGR"
BASE COUNT          571 a          872 c          778 g          583 t
ORIGIN      
        1 atgcgcgagt tgcgccgcga gcgcgacctg gttttcgtcg acattcgcgg caccggcgat
       61 tccaacgggc tgcaatgcag cttcccaatc gaccgcgccg acgtgcagaa tttttttctt
      121 gaccttttcg accccgtcag agttcaggca tgcagggaaa aactagagca gaccgccgac
      181 ttaagatatt acactacgcc gctagggatc gaagaccttg aagagatccg atccgcgttg
      241 ggctacgaca agattaacct atacggcatc tcttatggct cgctcgctgc attggaatat
      301 gtccggcgtt attccgacca tgtgcgctct gcggttctcg ccggcgttgc cgctcccacg
      361 gcgaaactac cgttgcagtt cgccttagcg gcgcaacagg cgatgaccag gctgtttcac
      421 gactgcgctg cggatgttgt ctgcgcctcg gcatacccca atctcactga cagcttcggc
      481 cggattcttg acgggtttat accggggacg gtgaattttg aagtggccca tcccgtaagc
      541 aaggcgatcc agacggtggc gctttcgcac ggtgtcttcg ccagacaagt tgtctccttg
      601 ctctacagtc atcgcactgc cagccttctc ccgctaatca ttgacagcgc agccaagggc
      661 aactggtctc cctatgtgcg aatcctcacg agatcggcgc cggcaccgga atttggcgtg
      721 tttctcggcg cctattttag cgccacctgc gccgagtcca taccgttcat cgatgaatcg
      781 gagctggaac gcgccactac cggcacgttc ttgggagatt atcgcacgcg ccagcaccaa
      841 caagtttgcg cttactggcc gcgcggcgcg atcgacccgg attatcatac tccggtgcgc
      901 gctgccgcgc cggtgctcat gctctccggc gatatcgatc cggcgacgcc ggcggagttt
      961 ggcgcccagg tgctcaagag tttgcccaat gggcgccaag ttattttgcg cagcacgccg
     1021 cacagctacg catcgccctg tgcgcgcgat cagatcgtcg cgttcatcac aaacggctcc
     1081 gccaaagaac tcgatgccag ctgcgcggca cgtttgcgcc gcccgccgtt cgcaaccgag
     1141 ctgccggcgc gctataaccg ctgagagata gcgatcctgt ttggcgctcg tcgtcattcg
     1201 ctcaatgaga aaagtgagtt gtccgccacg aaccggagaa atcaatcatg ttgaaacttg
     1261 ccgcgatgct actgttcctg gtcatgaccg gcggctgcgc cgagaacgtc gatcatgaca
     1321 ccgccctcgc caccaagcgc gccatcgagt ttgccgaagc gacgtttgtc cgcggcaatc
     1381 tcgatcaagg ctacgccatg ctcgccgaca aggcgcgcgc ttatgtgccc ttgaacattt
     1441 tcgccgacaa ggtgaaacag atgcacccat ccggccgtcc gagcaagatt gccagcctca
     1501 ccgccgcccc gataaaaggc gagaagatcg ttaacgtgac tctgcgcggt gaaggcgacg
     1561 gccagttcat gtacggcatc gcgctcattg gcacttcggc ggccgattac cgcgttagca
     1621 ctttcagcgg cgggcgcagt ccttaactaa cggccgaagg cgtgtgcctg gcggcgctgc
     1681 tgttcgtcac gaatggacgg gccgaagaca gtctcgaaat acttctcttt gaccagttgg
     1741 tcgaccaggc tgttatcgat catcttgctc aggtcgatgc ccttgagatc cgctccttgg
     1801 cgctcgatca ccgcgtcgat ggaacctttg agcgcgtagg gcaccgcctc gagcacgcgc
     1861 gctttgcgaa atagatcgta gactcgattg gcgtcgtcgc ggtcgcgcgt cccgccgtac
     1921 ttgatcatca cgtcagcggc gtaggccttg tcgtcgtaaa atcgtttgat cgcttccgca
     1981 tgcgccttga tataagccaa cgccgcgggg cgctccttgc ccagcgcatc gcggcgaaac
     2041 aaataatagg tcgacacata aatatcgtcg tgatcgagca gcacggcaag caccggcaag
     2101 cctgccgctt gcaagcgaaa ataagctggc gcggtgatca acgccgcgta gaccagaccg
     2161 ctttgcaacg ccgccgctct agccgcagcg tcgacgccga tggacaccca ctggacatcg
     2221 cgcgccgtca ggtgaaattt cctaagcagg ctgaccgcca tatgataggg cggatcgccg
     2281 accctgccga caccgatctt tttgccggcc aattgcttca tgtcgttggc gcttttcgag
     2341 ccgatcatgg agaaggaagc tttgttcatg aagccgccga gcacgaccaa cgacggatcc
     2401 ttggcggcgg cgagcagcgc cggatcgccg cccgacgaag tcatcgccgc atggccggta
     2461 atcaccgccg cgatgggcgc cgggtggacg gcatagacca actcgacatc gagtccatac
     2521 ttggcgtaaa gccgcgtttc tttggcgatc cacagcggcc aagacgcccc actgcgggcg
     2581 ccgaccatgg ccaccgattt ctgcaagggt tggccattta ctgatggcgg agaaaacacc
     2641 gtcaacgccg caatcgtcat tgcgccagaa atgatgacgt agaatttcca ataatttaag
     2701 ctagttaaat ggcgtaaacg tataaaatta attaacttag ccatcgttct tccccagccc
     2761 ttccatgacc tgatgccagt cgtcatccgc cggcagtatc gact
//
LOCUS       DATIRS010000098         2893 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1188246, whole genome shotgun sequence.
ACCESSION   DATIRS010000098 DATIRS010000000
VERSION     DATIRS010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2893)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2893)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2893
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1188246"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1352)
                     /locus_tag="VLM90_01230"
     CDS             complement(<1..1352)
                     /locus_tag="VLM90_01230"
                     /inference="COORDINATES: protein motif:HMM:NF013481.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016625 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, iron-sulfur
                     protein as acceptor [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde ferredoxin oxidoreductase C-terminal
                     domain-containing protein"
                     /protein_id="HSQ11602.1"
                     /translation="MHGFHGRLLHIDLTCGKVSWRALEASRLRAFLGGIGLGTSLLYE
                     FAPAGVDPYAPANPLIFTSAPLVGTGLTTTAKFAVVTKSPLTGFIADSLSSSHFALEL
                     KRVGIDALVITGRASSMVYISIQNDRVEISQAENLRGRSPSETETMIRAELSSPSMRV
                     AAIGKAGENLVRFATISNEGRHAGRGGVGAVMGSKNLKAIALRGNREISVADPSGVEA
                     IAGSLRRQSLGSLTDKYRNIGTVANLAVFNRLGTLPTRNFQQSTFDHAEALSGETLTV
                     NNFSRRHGCASCTIQCERLFKALNGAEQRLEYETLFALGPLCGIKDPQAVLQAAQLCD
                     QFGIDTISTGGTLAWAMECSERGLLPEAAELGLRFGQCDALFAAIGAIAERQGVGALL
                     AEGSRRAAIETGADTQRWAMHVKGLELPGYEPRSLKTMALGLAVSPRGACHNRSGAYE
                     A"
     gene            complement(1356..2387)
                     /locus_tag="VLM90_01235"
     CDS             complement(1356..2387)
                     /locus_tag="VLM90_01235"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HSQ11603.1"
                     /translation="MNQTRAEEATAVILAGGKSSRMGRPKALLRFAGEPLIVHMVRRL
                     GRLFSDTVVVAAADQELPALPSTIVRDDVAYQGPVGGIYYGLKAARREICFVTSCDAP
                     FLNLRLIAHLMAQISDYDVVVPFTQERFQPLHAVYRKQVAPLLKEQLERGELRPIFLY
                     DKVRTRKITEAEMHPFDPENLSFLNMNTPEDYQAALASWNERQIFEIETGQDRRRIEI
                     ETGRGGQGLETETAPPSVSDSDSVSTSVSVSNSIAVTVELFGVARLLAKTTEVSLSLP
                     QEATLSHVCAALATEHPVLLGRVINRDRSSLSSGYACNINGLEFVKNPNAKVNPGDKI
                     FILSADAGG"
     gene            2649..>2893
                     /locus_tag="VLM90_01240"
     CDS             2649..>2893
                     /locus_tag="VLM90_01240"
                     /inference="COORDINATES: protein motif:HMM:NF015418.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11604.1"
                     /translation="MFLYKPPCGGYLKDFFKVETPQEARRILLEVRPVGTETVATVRA
                     RSRVLAEDLFSQVDLPHFHRAAMDGYAVKAKDTFGAS"
BASE COUNT          594 a          835 c          871 g          593 t
ORIGIN      
        1 gcctcgtagg cgccggagcg attgtggcag gcgccgcgcg gactcaccgc gagacccaga
       61 gccatggttt tcaaactgcg cggttcatag ccgggaagct ccaagccttt gacatgcatc
      121 gcccaacgct gagtatctgc accggtttcg atggcggcgc ggcgcgagcc ttcggcgagc
      181 aaagcaccga cgccttggcg ctcagcgatg gcaccgatgg cggcgaaaag agcgtcgcac
      241 tgaccgaagc gcaagccgag ctctgccgct tcgggcagca atcctctctc gctgcactcc
      301 atcgcccagg cgagggtgcc gccggtgctg atggtgtcaa tgccaaattg gtcgcagagc
      361 tgcgcggcct ggagcaccgc ctgcggatct ttaatgccac agagtggccc gagcgcgaat
      421 aaggtttcgt attcgagccg ctgctccgcg ccgttgagag ctttgaacag ccgctcacat
      481 tggatcgtgc aggatgcgca gccatgccgg cggctgaagt tgttgacggt gagagtttcc
      541 ccgctcaacg cctcagcgtg gtcaaaggtc gactgctgga aattgcgcgt cggcaaagtt
      601 cccagccggt tgaataccgc caggttggcc acggtgccga tatttcggta cttgtcggtg
      661 agcgagccaa gactctggcg gcgcagagag ccggcgatcg cctcaacgcc gcttggatcg
      721 gccaccgaaa tctctcggtt gccgcgcaga gcgatggctt tgagattctt cgaccccatc
      781 accgcgccga ccccgccgcg cccggcgtga cgcccttcgt tgctgatggt ggcgaagcgc
      841 accaggttct cgccggcttt accgatggcc gccacgcgca ttgacggaga gctcagctcc
      901 gcgcgaatca tggtttcggt ttcgctcggg ctgcgtcctc tcaggttttc agcttggcta
      961 atctcgactc tgtcattttg gatcgagatg tacaccatcg acgatgcccg gccggtgatc
     1021 accagagcgt cgatgccgac gcgcttgagc tcgagggcga agtggctcga cgacagcgag
     1081 tcggcgatga agccggtgag cggggatttc gtcaccacgg cgaatttcgc cgtggtcgtc
     1141 agaccggtgc cgaccaatgg cgcgctcgtg aaaatcagcg ggttggccgg cgcataggga
     1201 tcgactcccg ccggcgcgaa ttcgtagagc aggctcgtgc ctagtccgat gccgccaagg
     1261 aatgcgcgca ggcgcgacgc ttcaagcgcg cgccacgaga cctttccgca agtcagatcg
     1321 atatggagca gtcgtccgtg aaagccatgc atgactcagc ctccggcatc cgccgaaaga
     1381 atgaagatct tatctcctgg attgaccttg gcgttgggat ttttgacaaa ctccagcccg
     1441 ttaatgttgc aggcataacc gctcgatagg ctgctcctgt cacggttgat gactcggccc
     1501 agcagcactg ggtgctcggt cgcaagcgcc gcacaaacat gagacaacgt cgcctcttgc
     1561 ggtaacgaca atgacacttc tgtggttttc gccaagagcc gcgccacgcc gaaaagctcc
     1621 acggtgacgg cgatagagtt agagacagag acagaggtag agacagagtc ggagtcggag
     1681 accgaagggg gggcggtctc tgtctcaagt ccctgtccgc cgcgaccggt ctctatctca
     1741 attctccgtc tgtcttgacc cgtctctatc tcgaatatct gcctctcgtt ccagcttgcc
     1801 aaggcggctt gatagtcttc cggtgtattc atgttgagaa agctcaagtt ctccggatcg
     1861 aatgggtgca tttcagcttc ggtgatcttg cgggtacgga ctttgtcgta gagaaaaatc
     1921 ggccgcagct caccgcgctc cagttgttct tttaaaagtg gcgctacctg tttgcgatag
     1981 accgcgtgga gcggctgaaa gcgctcctgg gtgaagggaa ccaccacatc gtagtctgag
     2041 atctgcgcca tgagatgagc gatcaagcgc agattcagga atggggcgtc gcaggaagtg
     2101 acaaaacaaa tttctcggcg cgcggcttta aggccataat agataccgcc gacggggccc
     2161 tgatacgcga catcgtcgcg cacgatcgtc gatggcagcg ccggcagctc ctggtcggca
     2221 gcggcgacca ctacggtgtc gctaaacaat cggccaagtc gacgaaccat gtgaacgatc
     2281 aacggctcgc cggcaaagcg caaaagcgct ttcggtcgac ccatgcgcga gcttttgccg
     2341 ccggccagga tgaccgctgt cgcttcttct gcccgtgtct ggttcattaa cgacacatct
     2401 atcccaggca cgataagatt taaagatata ttcatttcac gcaatcagcg ctgaatcgaa
     2461 gacactaggg tactatcccg gcgcagccgc aaccaaaggg gaaagagttt ttcaccacga
     2521 aggcacgaag gacacgacgg attcagatga ccaagactcc gaacttcgtg atcttcgtgt
     2581 ccttcgtggt gaacactctt gtgcgcagga agtagcgagc agcagcgctt taccttgcgt
     2641 tcacaaaagt gtttctatat aagccgccat gtggagggta tctgaaagat ttttttaaag
     2701 ttgagacgcc gcaggaggcg cgacgcattc ttctcgaggt gcgtcctgtg gggacggaaa
     2761 cagtggcgac cgttcgcgcc aggagtcggg ttctggccga agacctcttc tctcaggtgg
     2821 atctgccgca tttccaccgc gcggcgatgg acggttacgc ggttaaagcg aaagatactt
     2881 ttggcgcgag tca
//
LOCUS       DATIRS010000099         2280 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1581384, whole genome shotgun sequence.
ACCESSION   DATIRS010000099 DATIRS010000000
VERSION     DATIRS010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2280
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1581384"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..514
                     /locus_tag="VLM90_01245"
     CDS             <1..514
                     /locus_tag="VLM90_01245"
                     /inference="COORDINATES: protein motif:HMM:NF024739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ11605.1"
                     /translation="SMILHLDENKAREWARGVAANLARPPRGGDTDQLTAVGVGECSI
                     ALSNHYYYVRLMRSTKPEDRALVEKVHVVWPNQNDRGTHLNISGGGILKNAPNRDAAV
                     KFLEYLASDQAQALFANGNNEWPVVKGIKLANPELEKFGQFRTDNLSLASLGKTQGAA
                     QKLADQVGWK"
     gene            550..2244
                     /locus_tag="VLM90_01250"
     CDS             550..2244
                     /locus_tag="VLM90_01250"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HSQ11606.1"
                     /translation="MTTLTAALRSKAVGGIVVPRIGGLGIVSVITAALVVAPIAAVVW
                     NIFLPSEATWAHLISTVLPEYVANTFLLLILVAAGVLSCGVLSAWLVTAYEFPGRRIL
                     EWALVLPMAIPAYVMAYAYTDWLQTSGPVQSLLRELTGWRVREYWFPEIRSLPGAATM
                     LSFALYPYVYLLARAAFLEQSRSSYEAAQLAGYGAWGRFWHVSLPLARTGIVAGVALA
                     LMETLADFGTVSYFAVNTFTAGIYRAWLSLGDSVAAGQLATCLLIFVFAMLALERMHR
                     GGARYTSNRTPIAPQRLGGVKGLGAFALCAAPIVFGFVIPAAILLRLALTDPQVQFGS
                     RISGLITNTFILAGIAAMAAVIVAMLLAYAARTVKSPLVQAANRLAVLGYALPGAVIA
                     VGILLPLGKFDNALIAWIYQQFGVRTGLILTGSITALIYAYLVRFLAVAFQTVEAGLT
                     RVTPSMDDAARSLGLSPGRTLVRVHLPIMRSSVATAALLVFVDVLKELPATFAMRPFN
                     FDTLAVEAYNLAKDERIAEAALPALLIVVIALLPLVLLSRQIANVSQRRRNDAVQS"
BASE COUNT          411 a          713 c          668 g          488 t
ORIGIN      
        1 gagcatgatc ctgcacttgg acgagaataa ggcgcgcgag tgggcgcgcg gcgtcgccgc
       61 gaacttggcg cgcccgccaa gaggcggcga cactgaccag ctgaccgcgg tgggcgtcgg
      121 cgaatgttcg atcgctttgt cgaaccatta ttattatgtt cggctgatgc gttcgacgaa
      181 gccggaagac cgcgcgctgg tggaaaaagt ccacgtcgtc tggcccaatc aaaacgatcg
      241 cggcacgcac ctgaacattt ccggcggcgg gattctcaag aatgctccca accgcgatgc
      301 cgccgtcaaa tttctcgaat acctcgccag cgaccaggcg caagccctgt tcgccaacgg
      361 caacaatgaa tggccggtgg tcaaagggat caaattggca aatccagaac tcgagaaatt
      421 cggtcaattc aggactgaca acttgtccct cgcgagtcta ggcaagactc aaggcgcagc
      481 gcaaaagctc gctgaccaag tgggttggaa ataaccagcg cgacccgcga gacgccgccg
      541 cgaaagctca tgaccacgct caccgccgcc ctgcgctcga aagccgtcgg cggcatcgtc
      601 gtcccacgga tcggcggtct cggcatcgta tcggtgataa ccgccgccct ggtggtggca
      661 ccgattgctg cggtcgtctg gaacattttc ctgcccagcg aggcgacttg ggcgcacctg
      721 atatcgacag tcctccccga gtacgtcgcc aacaccttcc tgctactgat attggtcgcc
      781 gcgggagtcc tgtcatgcgg cgtactctcc gcatggctgg tgaccgccta tgaatttccc
      841 ggccgccgca tactggaatg ggcgctggta ctgccgatgg cgatacccgc ttacgtcatg
      901 gcctatgcat acaccgactg gctccaaacc tcaggccccg tacagagctt gttgcgcgaa
      961 ctcaccgggt ggcgcgtgcg cgaatactgg tttcccgaaa ttcgatcatt accaggtgcc
     1021 gcgactatgc tgtcgttcgc gctctacccc tatgtttacc tgctcgctcg cgccgccttc
     1081 ctcgaacagt cacgcagcag ctatgaagcc gctcaactgg ccggctacgg cgcctgggga
     1141 agattctggc atgtctcctt gccgttagcg cgcaccggga ttgtcgccgg cgttgccttg
     1201 gcgctgatgg agactctcgc cgatttcggc accgtttcat actttgccgt gaatactttt
     1261 accgctggca tctaccgtgc ctggctgtct cttggcgatt cggtcgcagc cggccagctc
     1321 gccacttgcc tgctcatatt tgtgtttgcc atgctcgcgc tggagcgcat gcaccgcggc
     1381 ggggcacgct acaccagcaa ccggacgccg atcgcgccgc aaaggctggg cggcgtgaag
     1441 ggtctgggag cattcgcgtt gtgcgccgcg ccgatcgttt ttggtttcgt aattccggcg
     1501 gcgatactgt taaggctcgc cctgaccgac ccgcaggtcc agttcggcag ccggatctca
     1561 ggactgatta ccaacacgtt tattttagcc ggcatcgccg ccatggccgc cgtcatcgtc
     1621 gccatgctgc tggcgtatgc ggcacgaacg gtgaagagcc cgctggtgca agcggcaaat
     1681 cgcttggccg tgctcggcta cgcgctgccc ggcgcggtga tcgccgtggg cattctcctg
     1741 ccgctaggca agttcgacaa cgctttgatc gcctggatat atcaacagtt tggcgtgcgc
     1801 accggattga ttttaaccgg ttcaataaca gctctcatct atgcctatct cgtcaggttt
     1861 cttgccgtgg cctttcaaac ggtcgaagcg gggcttacgc gcgtgacgcc atcgatggac
     1921 gatgccgcgc gcagcctagg tttgtccccc ggccgcaccc tggtgcgagt tcacttgccg
     1981 atcatgcgca gcagcgttgc cacggccgca ttgttggtat tcgttgacgt tttgaaagag
     2041 ttgccagcaa cttttgccat gcggccgttt aacttcgaca cgctggcggt tgaggcctac
     2101 aacttggcta aggacgaacg catcgccgaa gccgccctac cggcgctgct cattgtcgta
     2161 atcgcgcttt taccactggt cttgctgtcg cggcagattg cgaatgtgag ccagcgccgg
     2221 cgcaatgacg cggttcagag ttaggtttcc gttgattcgc tgagccccgc cgccgccgag
//
LOCUS       DATIRS010000100         1727 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_499769, whole genome shotgun sequence.
ACCESSION   DATIRS010000100 DATIRS010000000
VERSION     DATIRS010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1727
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_499769"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..281)
                     /locus_tag="VLM90_01255"
     CDS             complement(<1..281)
                     /locus_tag="VLM90_01255"
                     /inference="COORDINATES: protein motif:HMM:NF022892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2950 family protein"
                     /protein_id="HSQ11607.1"
                     /translation="MLHDLSANQNKQPSRQRLALGAMIILALTLCQLSLAATAAKQKS
                     FATPEEAVKAAFAAAKNNDDKELLAIYGPQAKELLFSGDAVADKQRRDRV"
     gene            complement(370..1641)
                     /locus_tag="VLM90_01260"
     CDS             complement(370..1641)
                     /locus_tag="VLM90_01260"
                     /inference="COORDINATES: protein motif:HMM:NF023165.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3300 domain-containing protein"
                     /protein_id="HSQ11608.1"
                     /translation="MKTKLFFARGLAWMMIFVLALPPEVIAQGAEANAVFKPEELEQI
                     VAPIALHPDDHIAQILMASTYPLEVVQAERWAKQNASLKGDALTKALEAQDWDPSVKS
                     LVNFPQVLTMMSEKLDWTQKLGDAFLADQKKVLDTIQSMRAKAQSAGNLKTTKEQTVI
                     VEEKIIKIEPANPQVIYVPTYNPTVVYGAWPYPAYPPYAYYPPGYIAGSAFWFAAGVG
                     MGAAWGYAWGNSNWNGGDVNINNSRNTNINNNIDRGKYAKNQPAGGQGGRWQHNAEHR
                     KGVSYRDQGTAQKFNKAGTNDAIKSREQFRGRAEQGRQDIGKGGVSDRAGAGAGDRGG
                     AGGGNRAATADRGAGHSGGNRGGASQLGGGGDRGGGSSRGGAYQGVDRGGSAASSASQ
                     RGSASRSSGGGSRGGGGGSRGGGGGGGGRRR"
BASE COUNT          290 a          553 c          472 g          412 t
ORIGIN      
        1 acccggtcac gcctttgttt gtccgccacg gcgtcgccgg aaaacagcag ttctttggct
       61 tgggggccgt agatcgccaa aagctcctta tcgtcgttgt tcttagcagc ggcaaaggcg
      121 gctttcactg cctcttcggg ggtggcgaaa ctcttctgct ttgccgctgt cgcggccaac
      181 gagagctggc atagggtgag tgctaaaata atcatcgccc cgagcgccaa cctttgccgg
      241 ctcggctgtt tgttctgatt tgcgcttaga tcgtgaagca tcgcttcttc ctccatgaaa
      301 tgagatacga ggctcgatgg tcaggcgtcg agaaaatttt cactcgacac tcgtccctcg
      361 atactattct taccggcggc gtccaccgcc accgccgccg ccacctcttg aaccgccacc
      421 gccgcccctt gagccaccgc cgctggaccg gctcgcgctg ccgcgttggc tggcactgct
      481 ggcggcgctg ccgccacgat cgacgccttg ataggcgcca ccgcggctgc tgccaccgcc
      541 gcgatcgccg ccgccaccga gttgactcgc gccaccgcgg ttgccacctg agtgcccggc
      601 gccgcgatcc gcggttgccg ctcgattgcc gccgcccgcg ccgccacgat cacccgctcc
      661 ggcgccggcg cgatcgctga cgccaccctt gccgatatcc tgcctgcctt gttcggctcg
      721 gccgcgaaac tgctcgcgcg acttgatcgc atcgttggtg ccggctttgt taaatttttg
      781 cgccgtccct tgatcacgat atgaaacgcc cttgcgatgc tcggcgttat gctgccaccg
      841 gccgccctgg ccgcccgccg gctgattctt ggcgtactta ccgcgatcga tgttgttgtt
      901 gatgttggtg ttccggctat tgttgatatt cacatcgccg ccattccagt tgctattgcc
      961 ccaggcataa ccccatgcgg ctcccatacc gacgccggcg gcaaaccaaa acgcggaccc
     1021 ggcgatatag cccggtggat agtaggcgta gggcggatag gccgggtacg gccaagcgcc
     1081 atacaccacc gtgggattgt atgtcgggac gtagatcacc tgcggattag cgggttcgat
     1141 cttgatgatt ttctcctcga cgatgaccgt ctgctctttg gtcgtcttga gattccccgc
     1201 cgactgcgcc ttggcgcgca tgctttggat cgtatcgaga acttttttct ggtccgccaa
     1261 aaaggcgtcg ccgagctttt gcgtccaatc gagcttctcg ctcatcatgg tgagcacctg
     1321 aggaaaattg accagcgatt ttacgcttgg gtcccagtcc tgcgcttcca gggctttggt
     1381 caacgcatcg cctttaaggc tggcgttttg cttggcccag cgctcggcct ggacgacttc
     1441 cagtggatag gtcgaagcca tcaagatttg cgctatgtga tcgtctgggt gcagcgcgat
     1501 gggcgcaacg atttgctcca actcttccgg tttgaaaacc gcgttggcct cggccccctg
     1561 tgcgataact tccggcggta gcgccaaaac gaatatcatc atccacgcca acccgcgtgc
     1621 aaaaaacagt tttgttttca tgctcatccc tctttcattg agctgtccgc tactatgatc
     1681 aagtttctgg gcgctagatt caaatctaag cgatcatttt acgaatc
//
LOCUS       DATIRS010000101         2566 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_696744, whole genome shotgun sequence.
ACCESSION   DATIRS010000101 DATIRS010000000
VERSION     DATIRS010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2566
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_696744"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1617
                     /locus_tag="VLM90_01265"
     CDS             <1..1617
                     /locus_tag="VLM90_01265"
                     /inference="COORDINATES: protein motif:HMM:TIGR02457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_process: GO:0000023 - maltose metabolic process
                     [Evidence IEA];
                     GO_process: GO:0005991 - trehalose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative maltokinase"
                     /protein_id="HSQ11609.1"
                     /translation="EQTLEGKALTLLERTLPAYFLSCRWFGGKAQQIRSVKKADIIPF
                     HVNDASAFFTTWEIQFLGAAQEVYVLPLAFATGERAFELRQANPQSIVAQLRIKYHDQ
                     EIDGVLYDALYDANFTKSLLSAVGRGRVYKVQGAALAMVPSKVYRKISGGAEGNLEPV
                     ILKREQSNTSVIYGDRMILKLFRRVTEGVNPDVEIGRFLTDKARFPYSPALAGSFELR
                     RGRAEPATLGILQGLVANEGDAWRYTLDSLGRYSDEILARKPDVQKAAVPMASPVKFI
                     DEEIPDLARDLIAAYLPSAHLLGQRTGELHMALGSEAKDAAFAPESFTALYRRSLYQS
                     MRTLADQSLTLLGKRLKGFAPEQRADAEKVLHLEDAIFARFRAIAETKFTAMRIRCHG
                     DYHLGQVLFTGKDFFIIDFEGEPARPISERRIKRSPLRDVAGMLRSFNYAAVANLKSD
                     ALRAEDAAQIRPWAHFWNYWVSVNFLKGYFEAIRQSVFMPKTRSEIALLLDIFLLEKA
                     VYELSYELNNRPDWVDLPIAGILHLMTERE"
     gene            1725..>2566
                     /locus_tag="VLM90_01270"
     CDS             1725..>2566
                     /locus_tag="VLM90_01270"
                     /inference="COORDINATES: protein motif:HMM:NF014919.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HSQ11610.1"
                     /translation="MDSQNTLSLFTDNDLYLFNEGSHFRLYDKLGAHRVEHAGTTGTY
                     FAVWAPNANHVSVIGEFNGWKNDQHVLQPKGESGIWEGYFPKVGKGTLYKYHIGSRFN
                     GYRADKADPFSIFNEIPPKFASIVWDLEYQWNDQPWMAERRQRQGLTKPMAIYEMHVG
                     SWKRIVEEDNRSLSYRELAPQLADHLHHLGYTHVEFMPIMDHPFFGSWGYQITGYFAP
                     SGNYGTPQDLMFLIDTLHQRGIGVILDWVPSHFPSDEHGLAYFDGTHLYEHADPRKGF
                     QPDW"
BASE COUNT          534 a          753 c          745 g          534 t
ORIGIN      
        1 gagcaaaccc ttgagggcaa ggcactgacg ctcctggaac gcaccttgcc ggcttatttc
       61 ctcagttgtc gctggttcgg cggcaaagcg cagcaaattc gctcggtgaa gaaggccgat
      121 atcatcccgt tccatgtgaa cgacgcgagc gcgtttttta ccacctggga aatccagttt
      181 ctcggcgccg cccaggaggt ctacgtcttg ccgttggcgt tcgctacggg ggagcgcgcg
      241 ttcgagttgc gccaggcgaa cccgcaaagc atcgtcgcgc aattgcggat taaatatcac
      301 gatcaggaga tcgatggcgt gctgtacgac gccctctacg acgcgaactt caccaagtca
      361 ttgcttagcg ccgtcggccg cgggcgggtt tacaaagtgc agggcgccgc actggcgatg
      421 gtgccgtcga aggtctatcg caagatcagc ggcggcgccg aaggcaacct ggaaccggta
      481 atcctcaaac gggagcagag caatacttcc gtgatctacg gtgatcgcat gattcttaaa
      541 ctgtttcgcc gcgtcaccga aggggtcaat cccgacgtgg agatcggccg cttcctcacg
      601 gacaaggccc gcttccccta cagcccggcg ctggccggct cgtttgaatt gcgcagggga
      661 cgcgccgagc cggctactct cggcatcctg caaggcctgg tcgcgaacga aggggatgcc
      721 tggcgctata cactggacag cctgggccgc tattccgacg aaatattggc gcgcaagccg
      781 gacgtccaaa aggccgccgt acccatggcg tctccggtaa aatttatcga cgaggaaatc
      841 cccgacttgg cgcgcgactt gatcgccgcg tatttgcctt cggcccatct tctgggacag
      901 cgcaccggcg agctgcatat ggccctcggc tcggaggcga aggatgccgc gttcgcgccg
      961 gaatctttta ccgcgctgta ccgccgctcg ctctatcaga gcatgcggac gttggccgac
     1021 caatcgctca ccttgctcgg aaaacggctc aaagggtttg ccccggagca gcgtgccgac
     1081 gccgagaaag ttctccatct ggaggacgcg atcttcgcgc gctttcgcgc gatcgccgaa
     1141 accaagttca ccgccatgcg catccgttgc catggcgact atcatctcgg ccaggtgctg
     1201 tttaccggca aagatttttt tatcatcgac ttcgagggcg agccggcgcg gccgatttcg
     1261 gagcgccgga taaagcgttc gccgctgcgc gacgtcgccg gcatgttgcg ctctttcaat
     1321 tacgctgccg tggcaaacct caaaagcgac gcgctgcgcg ccgaagacgc ggcgcaaatc
     1381 cggccctggg cgcacttttg gaattattgg gtgtcggtga attttctcaa aggctatttt
     1441 gaggccattc gccagtcagt atttatgccg aagacgcgtt cggaaatcgc cctgctgttg
     1501 gatatctttc ttctggaaaa agcggtctat gagctgagct acgagcttaa caatcgtccg
     1561 gattgggtag acctgccgat cgcggggatt ttgcacttaa tgacggagcg cgagtgaccg
     1621 cccggcgcga cttcccatgt ctgggatcgc ccactggccc gcgtgaaaat gacagtcgct
     1681 aatatcgctt tgaccgatcc caatgaaagg aaggtgatgc ctcgatggac agccaaaaca
     1741 ctttaagttt gttcactgac aacgacctgt atctattcaa cgaaggcagc cactttcgtc
     1801 tctatgataa gctcggagcg catagggtgg agcacgcggg aacgacgggg acatactttg
     1861 cggtttgggc gcccaacgcc aatcatgtga gcgtcatcgg cgagttcaac ggttggaaaa
     1921 atgaccagca cgtgcttcag cccaaaggcg agtccggcat ctgggaagga tattttccaa
     1981 aagtcggtaa aggcacgctt tacaaatatc atatcggctc gcgcttcaac ggttaccgcg
     2041 ccgacaaggc cgacccgttt tccattttca acgagatccc gccgaaattc gcatcgatcg
     2101 tctgggatct cgagtatcaa tggaacgatc agccatggat ggccgagcgg cgccagcgcc
     2161 aaggtctcac caagccgatg gcgatctacg aaatgcacgt cggatcatgg aagcgcatcg
     2221 tcgaggaaga caatcgctcg ctctcctatc gcgagctggc gccgcagttg gcggaccact
     2281 tgcatcacct gggctacacc cacgtcgagt tcatgccgat catggatcac ccgtttttcg
     2341 gctcgtgggg ctatcaaatc accggctact tcgcgccctc gggcaattac ggtacgccgc
     2401 aggatctcat gtttctgatc gacacgctgc atcaacgggg catcggcgtg attctcgact
     2461 gggtgccgtc gcatttcccg agcgacgagc atgggctggc gtatttcgac ggaacgcatt
     2521 tgtacgagca cgccgatccg cgcaagggat ttcagccgga ctggaa
//
LOCUS       DATIRS010000102         1922 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1876404, whole genome shotgun sequence.
ACCESSION   DATIRS010000102 DATIRS010000000
VERSION     DATIRS010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1922
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1876404"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..855
                     /locus_tag="VLM90_01275"
     CDS             <1..855
                     /locus_tag="VLM90_01275"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ11611.1"
                     /translation="RSHNESLLRLMTEYSGKVLGVALVPLQDVAGAIGEMEWAKERGF
                     CSVVLDKVYPVKDHPYGEPLGSHRELWPFFQRAEELSMPIYLHNVQHGHRISNLPIFQ
                     RDGLYIFAPQEGQMSLVSLITSGLLDEFPKLQFIFTEAGTSFIKPLVQWLDKVLDSPP
                     VDYDDQEDPLNTRGPLTKVGERLRRARAINPAQLFLEKNIKPASYYFKNNFSFTIETE
                     EPELSEAVEFLGAERFLFATDYPHDDPGGRMKFEDVRLLRDHKHISEDAKEMIRYKNA
                     QRLFHLPG"
     gene            881..1369
                     /locus_tag="VLM90_01280"
     CDS             881..1369
                     /locus_tag="VLM90_01280"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HSQ11612.1"
                     /translation="MAIPERYNTGYNIGVGGAVVRDDKLLFVRRSSRHGRGNWQLPGG
                     FIEPDETIEQAVVREVQEEAGVTAEVEAVLGLRSRYDPDSGNGVYVILLLRPIAGEPC
                     PDGHETDHAEFFSLEQIGKLSPLPPVNWEIAQRVLAPDRRLLHPKPLSNLNGAKFTLF
                     VG"
BASE COUNT          403 a          526 c          546 g          447 t
ORIGIN      
        1 cgctcgcaca acgagtcctt actgcgcttg atgaccgaat attccggcaa ggttcttggt
       61 gtggcgttgg tgccgctgca agatgtggcc ggcgcgatcg gcgagatgga atgggccaag
      121 gaacgcggct tttgctcggt ggttctcgat aaagtttatc cggtaaagga tcatccctac
      181 ggcgagccgc tcggcagcca ccgtgagctt tggccgtttt ttcaacgcgc cgaagaactg
      241 tcgatgccga tttacttgca caacgtgcaa catgggcacc gcatcagtaa tctgccgatc
      301 ttccagcgcg acgggctgta tatcttcgcg ccccaagaag ggcagatgag tttggtgtcg
      361 ctgatcacca gcggcttgct cgatgaattc cccaagttgc agtttatttt taccgaagcc
      421 ggcacttcgt tcatcaaacc tttggtgcaa tggctcgaca aggttttgga cagcccgccg
      481 gtggattatg acgaccagga agatccgctc aacacccgag gtccgttgac caaggtcggc
      541 gagcggttgc ggcgcgcgcg cgcgatcaat ccggcgcaat tatttctcga aaagaatatc
      601 aaacccgcga gttactattt caagaataat ttctctttca ccatcgagac cgaagagccg
      661 gagctatcgg aagcggtcga atttctcggc gccgagcggt ttctcttcgc caccgattac
      721 ccgcatgacg atcccggcgg caggatgaaa ttcgaagatg tccggctctt gcgcgaccac
      781 aagcacatct ccgaggacgc caaagagatg attcgctaca agaacgcgca gcgattgttt
      841 catttaccgg gttagcccat cgtcgaaagg cttaaatctc gtggcaattc ctgaacgcta
      901 caatactggc tacaacatcg gcgtcggtgg cgcggtggtt cgcgatgata aactattgtt
      961 tgtgcgccgg tcgtcgcgcc atgggcgagg gaattggcaa ctgccgggcg gttttatcga
     1021 acctgacgaa accattgaac aggccgtggt ccgagaggtt caagaagaag ctggggtgac
     1081 ggctgaagtc gaagctgtcc tgggcttgcg aagccgctac gatcccgaca gcggcaatgg
     1141 cgtttacgtg atcctgcttt tgcgccccat cgccggcgag ccgtgccccg acggccatga
     1201 gaccgatcat gcagaatttt tctcgctgga acagatcggc aagcttagcc cactgccgcc
     1261 ggtgaattgg gagatcgccc aacgggtcct cgcgcctgat cgccgcttgc tgcatcccaa
     1321 accgctcagc aatctgaacg gcgccaagtt tactctcttt gtcggttgaa cgcgttgtcg
     1381 atatcccgaa cttaataaaa aattaagtgc agtttcgact ggaagttctc ggaagatggc
     1441 tggaatgtta gcgggttggc gtggcccgat ccaccggtaa aatcgttact ttgaccaata
     1501 actggcggtc ggcttgtttg gcggcttcga tttccttgcc gctgaccttc ggttctgact
     1561 atatgttggc ttccgtggct agctcttttt tgaaaatttc gaagtgttcg ggtgcgacgt
     1621 cataaaatct tatttccgcg atagattcta tcctggctct ccctgtcggc ggcatggttg
     1681 atggccggcg cgctgcagcc ggcgagtctt ctgcctctgt gctgctcaaa ttttcgatag
     1741 tatcgcggcg ctggggcgag cgacggcgta cgacgaactc aaagtcggcg actcgatcgc
     1801 cgagcgcaat cggtcgctcc aacacaatcg gcgcgggtgg cggcccaata aaacttcggc
     1861 gatcgccaaa aataaaaccg gaatcccgcg ccgtggtcac ttcttggacc cgcagcggcg
     1921 gt
//
LOCUS       DATIRS010000103         2378 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1483329, whole genome shotgun sequence.
ACCESSION   DATIRS010000103 DATIRS010000000
VERSION     DATIRS010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2378
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1483329"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            71..2296
                     /locus_tag="VLM90_01285"
     CDS             71..2296
                     /locus_tag="VLM90_01285"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSQ11613.1"
                     /translation="MASTKQVVGNPTPRVEGELKVSGQAKYAVDVTLPDMLWGKLLRS
                     PIASGKIKRIDTSKAEKLKGVRAIITGADCSGLKIGRRLYDMPILADGEVRFIGEKVA
                     AVAADSEDIAEEAVNLIEVEYEETVPLLDPVEALKPGAKLLHPDVMNYKGLPNPLKEP
                     TNDFVYVTWGKGDPEAGFRQADVIVENTFTTPVVHQSYIEPHSCVVSAAADGSAEFWS
                     CSKVPYGVREQVANALKLPQEKLNFNPVYIGGDFGGKGDFMDLAVVYLLSKKAGRPVK
                     LVMDYEEEFTAGNPRHASIIHVKTGVKKDGTLVAHRMSFTFDSGAYGAFKPNAFLNGP
                     HLSAGPYKIPHVFIEEHMVYTNKIPCGHMRSPGDPQGFFANESQLDMIAKKLGMDPIK
                     LRQKNLMHDGDIDPTGEEYSYIKTDETLEKALDDSGYQKPKAKNVGRGIALVQWTPAG
                     GIGTVAISLDAKGVATISSAMADQGAGTYTVLSEIIAEELKIPLSQVKVQQLDTQQGT
                     KDTGVGGSRATRVYGNAGYEAALKAVAAIKQAAAEQMGTSPDQVVLAKGAALHPRMER
                     RLTYGEIVKAKGAPIAVEATFNDNAKIHAASMCVQVAEVEVDPDTGRVELKKFTSTHN
                     TGTVLNPLMHQGQIEGASMTGIGYTLMEEVIINDGKVATTHFGEYKIPTIKDVPAFKG
                     SVSEAPHGAGPYDSMPIGETGNIPTAAAIANAVADACGVRITSLPITAEKVYQALHGA
                     K"
BASE COUNT          573 a          684 c          714 g          407 t
ORIGIN      
        1 ccggccgaag cggagtccgc ctgttcatag atgtaaagtt accagattta ccgcaccagg
       61 aggtccatcc atggcatcaa ccaaacaagt cgtcggcaat ccaacaccga gagtcgaagg
      121 cgagctcaag gtcagcggcc aggccaagta tgcggtggac gtgaccttgc ccgatatgct
      181 ctggggcaag ttgctgcgca gcccgatcgc ctcgggaaaa atcaaacgca tcgatacaag
      241 caaggcagag aaactcaaag gcgtgcgcgc gattatcacg ggggcagact gctcggggct
      301 aaaaatcggc cgccgactct acgacatgcc gatcctggcc gacggcgaag tgcgcttcat
      361 cggtgaaaaa gtcgcggcgg tggcggccga cagcgaagac atcgccgaag aggcggtgaa
      421 tctgatcgaa gtcgagtatg aagagaccgt gccgctgctc gatcccgtgg aggcgctcaa
      481 gccgggcgct aaactcctgc atcccgatgt catgaactac aaagggttgc ccaatccgct
      541 caaggagccg accaacgatt ttgtttacgt cacttggggc aagggcgatc ctgaggccgg
      601 ctttcgccag gcggacgtga tcgtcgaaaa cacatttacc acgccggtgg tgcatcagag
      661 ttatatcgag ccccattcct gcgtcgtcag cgcggcggcc gacggctcgg cggagttctg
      721 gtcgtgcagc aaagtgccct acggcgtgcg cgaacaagtc gccaacgcgc tcaagctgcc
      781 gcaagaaaaa ctcaacttca atcctgtcta catcggcggc gacttcggcg gcaagggcga
      841 tttcatggac cttgccgtgg tttatctctt gtctaaaaaa gccggacggc cggtcaagct
      901 ggtgatggac tacgaagagg aattcaccgc gggcaatccg cgccatgcgt cgatcatcca
      961 tgtcaaaacc ggcgtaaaaa aagacggtac cctggtcgcg caccgcatga gctttacctt
     1021 cgacagcggc gcctacggcg catttaaacc caacgccttc ctcaatggcc cgcacctgtc
     1081 cgctgggccg tacaagattc ctcacgtatt tatcgaggaa catatggtct acaccaacaa
     1141 gattccctgc ggccatatgc gctcgcctgg cgacccccag ggattcttcg ctaatgagag
     1201 ccagttggac atgatcgcca aaaagctggg aatggacccg atcaagttgc gccagaaaaa
     1261 cttaatgcac gacggcgata tcgatccgac cggcgaggag tatagctaca taaagaccga
     1321 cgaaacgctc gagaaagcgc tggacgattc gggctatcaa aaacccaagg cgaaaaacgt
     1381 tgggcgcggc atcgctctgg tgcagtggac gcccgccggc ggtatcggca cggttgcgat
     1441 ctcgctggat gcaaaaggcg tggcgacgat atcctctgcc atggccgatc aaggcgcggg
     1501 cacgtacacg gtgttgagtg aaatcatcgc cgaggaactc aagattccct tgagccaggt
     1561 caaggtgcaa cagttggaca cgcagcaagg aactaaagat accggtgtcg gtggcagccg
     1621 ggcgacgcga gtctacggca acgccggtta cgaggcggcg ctgaaggccg tcgctgcgat
     1681 caaacaggcg gcggccgagc agatgggcac ttcgccggat caggtcgtct tggcaaaagg
     1741 cgcggctttg catccgcgta tggaacgacg actcacctac ggtgaaatcg tcaaggccaa
     1801 aggagcgccg atcgcagtcg aggcgacgtt taacgataat gccaagatcc acgcggcatc
     1861 catgtgcgtg caagtcgcgg aagtcgaggt cgaccccgat accggacggg tggagctcaa
     1921 gaaattcaca tcgacgcata acaccggcac tgtgctcaat ccgctgatgc accagggaca
     1981 gatcgagggc gcaagcatga ccggcatcgg ctacacgctg atggaggaag tgatcatcaa
     2041 cgacggtaaa gtcgcgacga cccacttcgg cgagtacaag atcccgacca tcaaggatgt
     2101 tccggcattc aaaggctcgg tttcggaagc gccgcatgga gccggccctt atgacagcat
     2161 gccgatcggc gagaccggca atattcccac tgcggcggcc atcgccaacg cggtggcaga
     2221 cgcttgcggt gtgcgtatca ccagcttgcc gatcacggcg gagaaggttt accaagcgct
     2281 gcacggcgcg aagtgacgca cggtgtcgtt tcccgggacc atcgatctcg gaacgttttg
     2341 aagaggagca gcaccgccgt ccgaagatga gcgcgccc
//
LOCUS       DATIRS010000104         1630 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_303547, whole genome shotgun sequence.
ACCESSION   DATIRS010000104 DATIRS010000000
VERSION     DATIRS010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1630
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_303547"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..730
                     /locus_tag="VLM90_01290"
     CDS             <1..730
                     /locus_tag="VLM90_01290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11614.1"
                     /translation="AANSKLINSWQYRRTRQGQIVGFEFSNHGGNPILAPRRDATKNQ
                     FYTRDFQFRFDDRARQDIHLMISDWVASRDRVFRLSGLMHSLMHFFPRSYLPAIVNAG
                     DNNIVTLPTGEEVRFDAVTKEIRGGVLTESPVDLSPNRTDRKYPTVTYQGQGVLVRAD
                     ARGADPRLGTTATISAGMAPPSCDKPSGCRKCEVPSKELWQQAGAVRFKFHTDQEFDR
                     FLTARCGFGLPRLGTEFAVTAPQS"
     gene            843..>1630
                     /locus_tag="VLM90_01295"
     CDS             843..>1630
                     /locus_tag="VLM90_01295"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ11615.1"
                     /translation="MADYLVVDADGHCQEPENDFAKWMPKEYAHLAPNRVTDSSGYNH
                     LMIEGRLGGRRRWGGGPDRGEVFASHIERSRPGMTDPLKRLPDMDEEGIDVAVIFGTS
                     IALSVNGMADKPLAALVCHAVNRWLVEEYLTPDPKRLKGVGLIPVQDPQAAVKELEYI
                     AQHRQVVSAMLPTNVYGINLGHRMFDPVYAAAQEMNIPLSVHPQTEHDGQYGVWGVMG
                     AGSERMEKYSYVHMTSCPFELMIALMHMIGEGVFDRYPRLKVGF"
BASE COUNT          356 a          506 c          456 g          312 t
ORIGIN      
        1 cgcagcaaac tcgaaactca tcaatagctg gcagtaccgc cgcacgcgtc aaggtcaaat
       61 tgtcggcttc gaattttcca atcatggcgg caaccctatt ctcgcgccgc gccgggatgc
      121 gaccaagaat caattttaca ctcgcgactt ccaatttcgc ttcgacgacc gggcgcgcca
      181 ggacatccat ctgatgattt ccgactgggt ggcgtcgcgc gaccgggtgt ttcgcctgag
      241 cgggttgatg cacagcttga tgcatttttt cccgcgcagt tacttgcccg ccatcgtcaa
      301 cgccggcgac aataacatcg ttactctccc caccggcgaa gaggttcgat ttgacgccgt
      361 caccaaggaa attcgcggtg gcgtacttac cgaatcaccc gtggatctaa gtccgaaccg
      421 cactgaccga aagtacccga cagtcaccta ccaagggcaa ggcgtgctgg tgcgcgccga
      481 cgcgcgcggc gccgatcccc ggctcggcac gacagcgacg atcagcgctg gaatggcgcc
      541 accgagctgc gataagccca gcggctgtcg caagtgcgaa gtgccgtcaa aagaactttg
      601 gcagcaagcc ggcgccgtgc gcttcaagtt tcacaccgat caggaattcg atcgtttcct
      661 caccgcccgt tgcggcttcg gcctgcctcg gctgggcacg gaattcgccg tcaccgcacc
      721 gcaatcgtga tcgcgttatc tagtaagcga acgaagagcg cgctgccgat tctttcgagt
      781 tgcatttcag ccgcaacccg actaggtaaa ggttaaagcg ttttatccac aaggagatct
      841 ttatggcaga ttatttagtc gtcgatgccg acggtcactg tcaggaaccg gaaaacgact
      901 tcgcgaaatg gatgcccaaa gagtatgccc atctcgcgcc caatcgcgtc accgatagct
      961 ccggctacaa tcatctaatg atcgaaggcc gcctgggcgg acgacggcgc tggggcggcg
     1021 gcccggatcg cggcgaagtc ttcgcgtcac acatcgaaag aagccgtccc ggcatgaccg
     1081 acccattgaa gcggctgccg gatatggacg aagagggtat cgacgtcgcg gtgatcttcg
     1141 gaacctccat cgcactgtcg gtcaacggca tggcggacaa accgctggcc gcgctggtct
     1201 gccatgcggt caaccgctgg ctggttgaag aatatctcac gcccgatccc aagcgcctca
     1261 aaggcgtcgg cctcattcca gtgcaggatc cccaagccgc ggtgaaggaa ttggaataca
     1321 tcgcgcaaca ccgccaggtc gtcagcgcca tgctgccgac caatgtctac ggcatcaatc
     1381 tcggccaccg catgttcgat ccggtatacg ccgcggcgca ggagatgaac atcccgctgt
     1441 cggtccatcc gcaaaccgaa catgacggcc agtacggcgt ctggggcgta atgggcgccg
     1501 gcagcgagcg catggaaaaa tacagctacg tgcacatgac ttcgtgtccc ttcgagctga
     1561 tgatcgccct catgcatatg atcggcgaag gcgtcttcga ccgttacccc aggctcaaag
     1621 taggattcat
//
LOCUS       DATIRS010000105         1883 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_794972, whole genome shotgun sequence.
ACCESSION   DATIRS010000105 DATIRS010000000
VERSION     DATIRS010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1883)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1883)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1883
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_794972"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..754
                     /locus_tag="VLM90_01300"
     CDS             <1..754
                     /locus_tag="VLM90_01300"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HSQ11616.1"
                     /translation="WVILGALVIFALQAALILGLLVQRRRRRQADAEIASLAGRLITA
                     QETERSRIARDLHDDINQQLASLSIALSGVKHRLQDGEAEGVAEEVARLQQRIVDVTH
                     VTRQLSHELHPGVLEHAGLVAALRGHCAEFGAQHGIDVKFSAAAGINGVPAETALCLY
                     RVTQEALRNIAAHAVAGTARVALTPAGKSLELSILDDGQGFDLAEARRRGGVGLVSLD
                     ERVRLIGGSLRIETQPQRGTEVLVSVPLREAT"
     gene            751..1386
                     /locus_tag="VLM90_01305"
     CDS             751..1386
                     /locus_tag="VLM90_01305"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSQ11617.1"
                     /translation="MKQRTKVLLADDHAMVAEGLAALLKDRFELVGTVGDGSALIDVA
                     RKLRPDVIIADMTMPVLSGLEALRRLKAARSDAKVIFLTMHADAELATEAFRAGASGY
                     VLKVSAGEELITAIQEVVQGRMYLTPLITKGVLTTLTEPTPKPAVKLSPRQLEVLRFI
                     AEGRRMKEIAALLDLSTRTVETHKYEMMRSLGVESTAELVRYAIQIGLVKS"
BASE COUNT          388 a          543 c          580 g          372 t
ORIGIN      
        1 gtgggtgatt cttggcgcgc tggttatttt cgccctccaa gccgcattga tcttgggctt
       61 gttagtgcag cggcgacggc ggcgccaagc tgacgccgaa atcgccagcc tcgccggacg
      121 gttgattacg gcacaagaaa cggaacgctc gcggatcgcg cgcgatctgc acgacgacat
      181 caatcagcag cttgcatcac tgtcgatcgc tctcagcggc gtcaagcacc ggctgcaaga
      241 cggcgaagcc gagggcgttg ccgaggaagt cgctcgactg cagcaacgca tcgtcgatgt
      301 cacccatgtg acccgccagc tttcccacga actccacccc ggggtactag agcacgccgg
      361 cctggtggcg gctttaagag gtcattgcgc cgagtttggc gcgcaacacg ggattgacgt
      421 caagttctcc gccgctgccg gcatcaacgg tgtgccggcg gaaaccgcgc tttgcctgta
      481 tcgagttacc caggaagcgc tgcgcaacat tgccgcccat gccgtcgcgg gcacggcgcg
      541 agtggccctg accccggccg ggaaaagctt ggaattaagt atcctcgacg acgggcaagg
      601 attcgatctc gcagaagctc gccgccgggg cggggttgga ctagtcagct tggatgagcg
      661 ggtgcggctg atcggcggca gcttgcggat cgaaacgcag ccgcagcgcg gaaccgaagt
      721 gctggtttcg gtgccgctcc gagaagcaac atgaagcaac gcaccaaagt gctgctggcc
      781 gatgaccacg cgatggtcgc tgaggggttg gcggccctat tgaaagatcg ctttgaactt
      841 gtcggcacgg tgggcgatgg cagcgccctg atcgacgtgg cgcgcaagct gcgtcccgac
      901 gtgatcatcg ctgacatgac catgccggtg ttgagcgggc tggaggcctt gcgccgcctc
      961 aaggcggcca ggagcgatgc caaagttatc ttcctgacga tgcacgccga cgccgagctg
     1021 gcgactgaag cgtttcgcgc cggcgcgtcc ggctacgtgc tgaaagtctc cgccggcgag
     1081 gagctgatca cggcgattca agaagttgtt caaggcagga tgtacctgac cccgttgata
     1141 actaagggtg tcctcacgac gttgaccgag ccaacgccaa aacccgcggt aaagctgtcg
     1201 ccgcgccaac tcgaagtgct gcgctttatc gccgaggggc ggaggatgaa ggagatcgcc
     1261 gcgctcctgg atctatccac gcgcaccgtc gagacccaca aatacgaaat gatgcgctca
     1321 ctcggcgtgg aaagcaccgc cgagcttgtc aggtacgcca tccaaatagg tcttgtcaaa
     1381 agctagcctg atatcggtcc ggactcgaat cgccagagcg cgtaagcgct gcgaattttc
     1441 tatgttcatg cttcgcaaat aatctgaagc actgaaccta gaatgctgca tcgcgaacaa
     1501 gcgtatcctt agtcggtatt ttttcgaaat cctgtcctcc gtattttttc tgaccccgta
     1561 ccagtagttt tgcgaattgt tccaacgcgc aattccgata agtatccgtg tcgagataag
     1621 catggttgtg gctcttatac gctttgcggc atctcggtgt actcaccaaa cgacatcggc
     1681 cggcgcccgg gttgtgatgg cggaagcgtg ttcaaggctg tcgcaaaatt gcggcgatca
     1741 cgatgcttca agatcacaaa caggacggta ataaaggccg gcgcgcgcga gtgctcttgg
     1801 ccgatgatca cccggcggta gtgaaggatc tgtgtgccgt gctgcagccg gagttcgatg
     1861 tcatcgccac cgttgaaaac ggt
//
LOCUS       DATIRS010000106         1877 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1581701, whole genome shotgun sequence.
ACCESSION   DATIRS010000106 DATIRS010000000
VERSION     DATIRS010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1877)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1877)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1877
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1581701"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..183
                     /locus_tag="VLM90_01310"
     CDS             <1..183
                     /locus_tag="VLM90_01310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11618.1"
                     /translation="VDPRGGKYYWIGGDDLGFAKDDGTDCMAVHEGYISVTPLQCDMT
                     DHRFLSETPVAPFPWP"
     gene            197..592
                     /locus_tag="VLM90_01315"
     CDS             197..592
                     /locus_tag="VLM90_01315"
                     /inference="COORDINATES: protein motif:HMM:NF013633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein"
                     /protein_id="HSQ11619.1"
                     /translation="MSEHDEPIRIDKWLWAARFFKTRSLAAEAVSGGKVEINGERAKP
                     SRIVRAGDKLCVRRGLYEWIVVVKKVSHGRGPVPQAQSIYDETEESTQQRRAMAAQLK
                     LERPAEFTAPGRPTKRDRRAISRFTKRGG"
     gene            690..1748
                     /locus_tag="VLM90_01320"
     CDS             690..1748
                     /locus_tag="VLM90_01320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11620.1"
                     /translation="MKPIVSLTTAVMLFVLLGGTPGFSQSTPYFQGKTIVLVQGREPG
                     GTGALRTQAAIPFLKKYLPGEPIIVTQFMPGGGGRKAANFVARNAKPDGLTLGNVGSG
                     LVANAVLGSTGVEYDIDKLIYLGAANSTAQYVFGSMAKLGLDSLEKLRAHPGLRVGAQ
                     TVGHDIYINGRLFSWILGLKDPRFVTGFSGPELDLAMDRGELDARANIPDTILQRNAD
                     QLEKKRLNFHAIIQIPKDDRHPHPLFNKLPELESFAKSERERKIMTMFRTFRLVGSPY
                     ILPPGTPAEAVAHWREAMRKTFRDPAFLKDFKRLSADDATPLLPEAQEKAIKDIPRDA
                     DIIALFNKIAGNEPLPPR"
BASE COUNT          414 a          584 c          534 g          345 t
ORIGIN      
        1 gtcgacccgc gcggcggcaa gtattattgg atcggcggcg acgacttggg cttcgccaag
       61 gatgacggca ccgactgcat ggcggtgcat gaagggtaca tctcggtgac gccgctgcaa
      121 tgcgacatga ccgaccaccg gttcttgagc gagacgccgg tggcgccgtt tccctggccc
      181 taacccatcc cgcatcatgt cggagcacga cgaaccgatt cgcatcgaca agtggctctg
      241 ggccgcgcgc ttcttcaaga cccgctcatt ggctgccgaa gcggtgagcg gtggcaaggt
      301 cgaaatcaat ggcgagcgcg ccaaaccaag ccgcatcgtc cgcgccggcg ataagctctg
      361 cgtccgccgc ggtctctatg aatggatcgt cgtcgtgaaa aaagtttcgc acgggcgcgg
      421 cccggtgcca caagcgcaat ccatttatga cgaaaccgag gagagtacgc agcaacgccg
      481 cgccatggcg gcgcagttga aattagaacg ccccgcggaa ttcaccgcgc cgggccggcc
      541 gaccaagaga gaccgccggg cgatttcacg cttcaccaaa cgcggcgggt agcttagtca
      601 ggcggtcgac aaaactgtct tgaattcacc ggtctgcatg atagacaact acgacgctga
      661 ttttctaggg gataaacagg ggataaacga tgaagccaat agtctcgtta acgaccgcgg
      721 taatgttatt tgtgctactc ggcggcacgc cgggtttcag ccaatcgact ccctatttcc
      781 agggtaaaac catagtgctg gtgcaaggcc gcgagcccgg cggcaccggc gcactgcgca
      841 cccaagccgc gataccgttt ctaaaaaaat atcttcccgg cgagccgatc atcgtcaccc
      901 agttcatgcc cggcggcggc ggccgaaagg cggcgaactt tgtcgcgcgc aacgctaaac
      961 ctgacgggct aaccttggga aatgtcggct ccggcttagt cgccaacgcc gtgctcggtt
     1021 ccaccggtgt cgagtacgac atcgataagc tgatatacct cggcgccgca aacagcacag
     1081 cgcaatatgt attcggctcg atggcaaaac tggggctcga tagcttggag aaattgcgcg
     1141 cccatcccgg cctgcgcgtc ggcgcgcaaa ccgtcggcca tgacatctat atcaacggcc
     1201 ggctgttttc ctggatactc ggtcttaaag acccacgttt cgttaccggt ttctccggcc
     1261 cggaactcga cctcgccatg gaccgcggtg agctagacgc ccgcgccaac attcccgata
     1321 ccattttgca gcgcaatgcc gatcaattgg aaaagaaacg gctcaacttt catgcgatca
     1381 tccagatccc caaggacgac cgccatcccc atccgctgtt caacaaactg cctgagctag
     1441 aatcgttcgc caagagcgag cgcgagcgca agatcatgac catgttccgc acctttcgcc
     1501 tggtcggctc gccctatatt ctaccgccgg gaacgcccgc cgaggcggtg gcgcactggc
     1561 gcgaagcgat gcgcaagacc ttccgcgacc cggcgttctt gaaggatttc aagcgattgt
     1621 ctgccgacga cgccacgccg ctgttaccgg aagctcagga aaaggcgatc aaagacattc
     1681 cgcgggacgc cgatatcatc gcgctgttca acaagatcgc cggcaatgaa ccgctgccgc
     1741 caaggtagtc gcgagcctat gtatagcgat cctcaaccgc cgctagcatt ttaagtgggg
     1801 atgatcgcca tgatcgacgc caaactgatt accaccgcgc aggatctgcc cggctatcga
     1861 gtcgtgcgaa gcctggg
//
LOCUS       DATIRS010000107         2532 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1188590, whole genome shotgun sequence.
ACCESSION   DATIRS010000107 DATIRS010000000
VERSION     DATIRS010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2532
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1188590"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1182
                     /locus_tag="VLM90_01325"
     CDS             <1..1182
                     /locus_tag="VLM90_01325"
                     /EC_number="5.6.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF013311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase"
                     /protein_id="HSQ11621.1"
                     /translation="LYSLIWDRFVASQMVPAVYDQTAFEIPVKEAVFRATGQQIKFDG
                     FMKVYIEGRDERASQNSDEDEDEAQDLDGVLPDLHKGDALTLQAMEPRQHFTQPPPRF
                     TQASLIKELDENGIGRPSTYAAIISNILDREYVSQNESRQVVPTDLGFLVNDLLVESF
                     PDILNVEFTASMEDELDKIEDGKEKWTKAMKRFYTPFAKDLKKAEKEMRDVKRQEVPT
                     DIACEKCGKLMVVKWGRNGEFIACPSYPDCKNTKNFKRDDKGEIEIAVEEEVDEACEK
                     CGKPMLLRFGKFGKFLGCSGYPECKNIQPLQKPVDLGIKCPECKEGNIKERKSRWGKM
                     FYGCDKYPECKFATWDKPMPTPCPDCDSPILVEKVLKRTGRTHRCYKKECGYSIQVAE
                     Q"
     gene            1406..>2532
                     /gene="trmFO"
                     /locus_tag="VLM90_01330"
     CDS             1406..>2532
                     /gene="trmFO"
                     /locus_tag="VLM90_01330"
                     /inference="COORDINATES: protein motif:HMM:NF003739.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate--tRNA-(uracil(54)-
                     C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO"
                     /protein_id="HSQ11622.1"
                     /translation="MEKFVRIVGGGLAGSEAAWQLARRGVAVEIYEMRPQRMTEAHAT
                     ANLGELVCSNSLRSDSLSAPAGLLKAEMRQFDSLVIRVAEANRVPAGSALAVDRDRFA
                     AALTAAVEILPQIRIIRQEVKTIPDDGVVILATGPLTSADLSAELTARLGEEHLYFYD
                     AISPIVTAESIDMNIAYRASRYDKGGDDYLNLPMTREEYYAFIDALAAAQRVPTHSFE
                     RFVPFEGCMPIEEMADRGKDTLAFGPMRAVGLIDPRTGKRPHAVVQLRQENRERTLYN
                     LVGFQTKMTYPEQRRVFGLIPGLANAEFVRLGSLHRNTFINAPQHLTPTLQWRQRESL
                     FFAGQMTGVEGYIESAAVGMLAGINAARLLAALPLLVPPPTT"
BASE COUNT          566 a          708 c          768 g          490 t
ORIGIN      
        1 ctctattcct tgatttggga tcgcttcgtc gccagtcaga tggtgccggc ggtgtacgat
       61 cagaccgcct tcgagatccc ggtgaaagaa gcggtgttcc gcgccaccgg ccagcagatc
      121 aagttcgacg ggtttatgaa agtctatatc gaaggacgcg acgaacgggc cagccagaac
      181 agcgacgaag atgaagatga ggcgcaggat ctcgatggcg tgttgccgga tctgcacaag
      241 ggcgatgcgc tcacgctcca agcgatggag ccgcgccagc atttcaccca gccgccgccg
      301 cgctttactc aagcctcgtt gatcaaagaa cttgacgaaa atggcatcgg ccggccgtcg
      361 acctatgcgg cgatcatttc caatatactc gatcgcgagt atgtttcgca gaacgagagc
      421 cgtcaggtgg tgccgaccga tttgggtttt ttagtgaacg atctcttggt tgaaagtttt
      481 cccgatattc tcaacgtcga attcaccgcc agcatggagg acgaactcga caagatcgag
      541 gacggcaagg aaaagtggac caaggcgatg aagcggttct acacgccgtt cgcgaaagat
      601 ctcaagaaag ccgaaaaaga gatgcgcgat gtcaaacggc aggaagtgcc caccgatatc
      661 gcctgcgaaa aatgcggcaa gctgatggtg gtcaagtggg ggcgcaacgg cgagttcatc
      721 gcctgcccga gttaccccga ctgcaagaac accaagaact tcaaacgcga cgacaaaggc
      781 gagatcgaaa tcgccgtcga ggaggaagtc gacgaagcct gcgagaaatg cggcaagccg
      841 atgctcctgc gcttcggcaa gttcggcaag tttctcggct gcagcggcta tcccgaatgc
      901 aaaaacatcc agccgctgca aaagccggtg gatctcggca tcaaatgccc ggagtgcaaa
      961 gagggcaata tcaaagaacg caaatcacgc tggggcaaaa tgttttacgg ctgcgacaag
     1021 tatcccgaat gtaaattcgc cacctgggac aagccgatgc caacgccttg tcccgactgc
     1081 gacagtccga tcttggtcga aaaagtcctc aagcgcaccg ggcgcaccca ccgctgctat
     1141 aagaaggagt gcggctactc gatccaagtg gcggagcaat agcgccgggc ggcacggctg
     1201 tagccaagta agatatgaga attggccgca aagaacgcaa aggtcagaaa ttggaatcgg
     1261 atgtaggggc gggttttaaa cccgccctct ggctagattg attgcaaaga tttgactgcg
     1321 actgcagaga atcctccggt cgtgttatta agaacagtgc cccaaacagg atgccattcg
     1381 tctcttctcg gcggtcatag gctttatgga aaaatttgtg cgcatcgttg gcggcgggct
     1441 ggccggttcg gaagcggcgt ggcagttagc gcgccggggt gtggcggtgg agatttacga
     1501 aatgcgcccg cagcgcatga ccgaggccca cgcgaccgcg aacttgggcg agctcgtgtg
     1561 cagtaattcg ctgcgttccg attcgctctc ggcgccggcc ggtttgctca aagccgagat
     1621 gcgtcaattc gactcgctgg tgattcgcgt cgccgaagcg aaccgcgtgc cggcgggttc
     1681 ggcgttggcg gtggatcgcg atcgcttcgc cgccgctttg acggcggcgg ttgaaatcct
     1741 gccgcagata agaattatcc gccaagaagt caaaaccatc cccgacgatg gcgtggttat
     1801 cctggccacc ggtccgttga cttcggccga tttgtcggcc gaattgacgg cgagattagg
     1861 cgaagaacat ttatattttt atgacgcgat ttcgccgatc gtcaccgccg agtcgatcga
     1921 catgaatatc gcctaccggg cttcgcgtta cgacaagggt ggcgacgact atctaaatct
     1981 gccgatgacg cgagaagagt actacgcttt catcgacgcg ctggcggcgg cgcaacgggt
     2041 gccgactcat agcttcgagc gtttcgtgcc cttcgagggc tgcatgccca tcgaagagat
     2101 ggccgatcgc ggcaaggata cgctcgcctt cggtccgatg cgcgccgtcg gcttgatcga
     2161 tccgcgcacc ggcaagcggc cccacgcggt ggtgcaactg cgccaggaga atcgcgaacg
     2221 gacgctttat aatctcgtcg gctttcaaac caagatgacc tatcccgagc agcgccgcgt
     2281 gttcgggctc attcccggtc tggctaacgc cgaattcgtg cggctcggca gcttgcaccg
     2341 caataccttt atcaacgcgc cgcagcattt gacgccgacg ctgcagtggc gccagcgcga
     2401 atcgctgttt ttcgccggcc agatgaccgg tgtcgaaggg tatatcgagt cggcggcggt
     2461 gggcatgctc gccggcatca acgcggcgcg tctgctcgcg gcgctgccac tgctggtgcc
     2521 gccgccgacg ac
//
LOCUS       DATIRS010000108         2163 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1680174, whole genome shotgun sequence.
ACCESSION   DATIRS010000108 DATIRS010000000
VERSION     DATIRS010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2163
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1680174"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            112..1206
                     /locus_tag="VLM90_01335"
     CDS             112..1206
                     /locus_tag="VLM90_01335"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HSQ11623.1"
                     /translation="MASVRGATLLGPDKLELREYPMPDIPADGGLLKIEMGGVCGTDV
                     KYLHGKLKVDYPIILGHEILGRVEKLGKNAATIHHVKEGDRVILKGALGCGRCADCRR
                     NNQRFCRQRTNYGGRTKCDLPPHLFGGFADYLYLAPDVLCTKVSESLSAEAAALVGSV
                     MANGFQWAIRRGGVKMGDFVLIQGPGQQGLSCTFASKHAGAAKIFVTGIGRDKPRLEL
                     AKKFGATRTINVEEEDVVEVIRKETNGELCDVVIDVSGNPNAILKSVDCLHRQSTMVL
                     GGLTGDATVTPMLMDKLVWNEIKLQGCFTADNDATEAALRIIEETKFPVEQMVSHVFP
                     LKDIEHCIRSIGGEVPGTFPTKALINPAIG"
     gene            1275..2033
                     /locus_tag="VLM90_01340"
     CDS             1275..2033
                     /locus_tag="VLM90_01340"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ11624.1"
                     /translation="MIEGLTDKVVIVTGGAHGIGKAYCKGFAGAGACVVIADIDLPGA
                     AAAAKEIGAQALPIQVDVSNEDATKKMAAQALDSFGRIDVLINNAAVFSVVPMNRGRI
                     ETIDPAEWDKLMAVNLRGLFFCCRAVLPAMRAQKSGKIINVASGTVFAGSPGRIHYVT
                     SKTATIGFTRTLAREVGGDNINVNCLAPGNTLSEENPSAETIRLRESSAGLRALKRIQ
                     VPQDVVGAMLFLASPLSDFMTGQTVNVDGGISFL"
BASE COUNT          494 a          623 c          633 g          413 t
ORIGIN      
        1 cgtgaaatga cacgacctct gatttaagat cagaggtcgt gtcatcccga gcgaaagcga
       61 gggatctcgt ccaaaaagat ctgaatgata aacatttaag gaggacaatc catggcaagc
      121 gtaagaggcg caacactact agggccggat aaattggaac tgcgcgaata tcccatgccg
      181 gatattcctg cggacggcgg cttacttaaa attgaaatgg gcggcgtgtg cggcaccgac
      241 gttaaatatc tccacggcaa gctcaaggtc gactatccga tcattctcgg ccatgaaatt
      301 cttggcaggg tcgagaagct cggcaagaac gccgcgacga ttcaccatgt caaagaaggc
      361 gaccgggtta ttctcaaagg cgcgctcggc tgtggccgct gcgccgactg ccggcgcaat
      421 aatcaacgat tctgccgcca acgcaccaac tacggcggcc gcaccaaatg cgacctgccg
      481 ccgcatctgt tcggcggctt tgccgattat ctctacttgg cacccgatgt tctttgcacc
      541 aaagtgagcg agtcgctgtc tgctgaagcg gcggcgctag tcggctcggt gatggccaac
      601 ggttttcaat gggcgatccg ccgcggcggc gtcaagatgg gtgactttgt gctcatccag
      661 ggaccgggac agcaaggatt gtcgtgcacc ttcgcctcca agcatgccgg cgcggcaaaa
      721 atcttcgtca ccggcatcgg ccgcgacaag ccgaggttgg aattggcgaa aaaattcggc
      781 gccacccgca cgatcaatgt cgaggaagag gatgtcgtcg aagtgatccg caaggaaacc
      841 aacggtgagt tgtgcgacgt cgtcatcgac gtgtcaggca atcccaacgc gatcttgaaa
      901 tcggtggact gtctgcaccg ccaatcgacc atggtgctgg gcggcttgac cggcgacgcc
      961 acggtgacgc cgatgttgat ggacaagctg gtgtggaacg agatcaaact gcaaggctgc
     1021 ttcaccgccg acaacgacgc caccgaagcc gcgttgcgca tcattgagga aaccaagttt
     1081 ccggtcgaac agatggtcag ccatgtcttt cccttgaaag acatcgaaca ctgcattcgc
     1141 tccatcggcg gcgaggtgcc gggcaccttc ccgaccaagg cgctgatcaa tccggcgatc
     1201 gggtaggcga taggcgacgg cgcggtccgt ggtaggggcg attcatgaat cgcccttgta
     1261 ttaaatcaat cggaatgatc gaaggcctca cagataaagt cgtcatcgtt accggcggcg
     1321 cccatggcat cggcaaagct tactgcaaag gcttcgccgg tgccggcgcc tgcgtcgtca
     1381 tcgctgacat agacctgcca ggcgcggcag cggcagccaa ggaaatcggc gcacaggcgt
     1441 tgccaattca ggtcgacgtg tcgaacgaag acgccaccaa gaaaatggcg gcgcaggccc
     1501 tcgatagctt cggccgcatc gacgttctca tcaacaacgc cgcggtattt tccgtggtgc
     1561 cgatgaaccg gggccggatt gaaaccatcg atccggcgga atgggataag ctgatggcgg
     1621 tgaatctgcg cgggctgttt ttctgctgcc gcgccgtgct gccggccatg cgcgcgcaga
     1681 agtccggcaa gattatcaac gtcgcatcgg gcaccgtctt cgccggcagc ccagggcgga
     1741 ttcattacgt tacgtcgaag accgccacca tcggttttac ccgcactcta gcgcgcgaag
     1801 tcggcggcga caatatcaac gtcaactgtc tggcccccgg caacacgctg tcggaagaga
     1861 atcccagcgc ggaaaccatt cgcctgcgcg agtcctccgc cggcctgcgc gccctcaagc
     1921 ggatccaagt gccgcaagac gtcgtcggcg ccatgctatt cctggcctcg ccgctgagcg
     1981 atttcatgac cggccagaca gtgaatgtcg acggcggcat atcgttcctg tgacgaaaat
     2041 agattgatgg agtactggag tgttggagtg ataggaagaa cgccgggaaa acatccgaac
     2101 ccactactcc attattccag cactccatta ctccaatttg cctaagaagg agttttgcca
     2161 tga
//
LOCUS       DATIRS010000109         1674 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_795091, whole genome shotgun sequence.
ACCESSION   DATIRS010000109 DATIRS010000000
VERSION     DATIRS010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1674
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_795091"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1674)
                     /locus_tag="VLM90_01345"
     CDS             complement(<1..>1674)
                     /locus_tag="VLM90_01345"
                     /inference="COORDINATES: protein motif:HMM:NF021606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2339 domain-containing protein"
                     /protein_id="HSQ11625.1"
                     /translation="NLLGFLFTFIIGVIWGDRYYRPEFFASTEPFLTLFFLFYVAIAV
                     LFALRQDARVKDPVDGALVFGVPIVGFGLQCALVRDIEYAAAFSALALSGFYLSLAKY
                     FFSRAGANLRLLVESFLALGVVFGTLAIPLALDGRWTAAAWALEGAAIVWVGVRQEKI
                     PARGFGYFLLYASGAAFFFGAPGSHGAVPVFNSFYLGCVIIAVSALFSAWFVKQRRAL
                     LSEADAIVVVALFWWGCAWWLGGALTEIHQQVARAYRLHAALLFISASGALFSMLHRR
                     IDWLAARYAALALLPLLYIATVVEIDRSAHPFEYFGSVVWPLAIATNLWILRRHEDFR
                     YIGWWHAAALWLGVGVISWEGAWWLGGLVRGGDVWRLVGWPLVPIALLTWLSDRGERM
                     TWPVARHFAAYLFHGGVVLAGFLWLWMLHGNFDSRGDPAPLPYLPLFNPLDLAQGAAL
                     LTLFAWLRRMRGMLFAPAIFHTADLAYVVLGSIGFIWLNGALLRTLHHWGDVPFNLDA
                     MTRSMLVQASLSIFWSLLALCTMVTATKIRLRPLWLAGAGLMAIVVAKLF"
BASE COUNT          454 a          535 c          486 g          199 t
ORIGIN      
        1 gaatagttta gcgacgacga tggccatcag cccggcgccg gccagccaca gcggccgcag
       61 tcgaattttt gtcgccgtga ccatggtgca gagcgccaac agactccaga aaatcgacaa
      121 cgacgcctgc accagcatcg agcgcgtcat cgcatccaga ttaaacggca cgtcgcccca
      181 atgatgcagc gtgcgcagca gcgcgccatt gagccagata aagccgatac tgccaaggac
      241 gacataggca agatctgcgg tgtgaaatat cgccggcgca aacagcatcc cacgcatgcg
      301 ccggagccag gcaaacaagg tcagcagcgc cgcaccctgg gcaagatcga ggggattgaa
      361 gagcggcaag tacggcaacg gcgccgggtc gccacggctg tcgaagttgc cgtgcaacat
      421 ccacagccat aggaagccgg cgagaacaac accgccgtga aataagtaag ctgcaaaatg
      481 gcgcgccacc ggccaagtca tgcgctcgcc gcggtcgctc aaccaggtca acagcgcaat
      541 cggtaccagc ggccaaccga ccagacgcca gacatcgcca ccgcgcacca gaccgccaag
      601 ccaccaggca ccttcccagg aaatgacccc gacgccgagc cacagcgccg ccgcatgcca
      661 ccagccaata taacggaaat cttcatggcg gcgcagaatc cacagattgg tcgcgattgc
      721 caaaggccaa acaaccgaac cgaaatattc aaacggatgg gccgaccgat cgatttccac
      781 gacggtggca atatacaaga gcggcaagag cgccagcgcc gcatagcgcg ctgccaacca
      841 atcgatgcgc cggtgcagca tgctaaacag cgcgccggac gcgctgatga acaacagcgc
      901 ggcatggaga cgataagcac gggccacctg ttggtgaatt tccgtcaacg cgccgcccag
      961 ccaccacgca cagccccacc agaacaaagc gacgacgacg atggcgtccg cttcgctcaa
     1021 cagcgcgcgc cgttgtttga caaaccacgc cgaaaacaac gccgacacgg cgatgatgac
     1081 gcagcccaga taaaaactat tgaacaccgg cacggcacca tgggaacccg gcgctccgaa
     1141 gaaaaacgcc gcgccgctgg cgtagagcag aaaatagccg aagccgcggg cgggaatttt
     1201 ttcctgacgc acgccgaccc agacgatcgc ggcgccttcc aaagcccaag ccgccgcggt
     1261 ccagcggccg tcgagggcga gaggaatcgc cagggtgccg aagaccacgc cgagggcgag
     1321 aaacgattcg acgagcaggc gcagattggc gccggcgcgg gagaaaaagt atttcgccag
     1381 cgataaatag aacccgctca gcgccaaagc gctgaacgcc gcggcgtact cgatatcgcg
     1441 caccagcgcg cattgcaggc cgaagccaac gatcggcaca ccgaacacta gcgcgccgtc
     1501 cactggatct ttgacgcggg cgtcctgacg cagcgcgaac agcacggcga tggcgacgta
     1561 gaaaagaaag aacagggtca gaaaaggttc agtgctggca aagaattcgg gccggtagta
     1621 acggtcgccc cagattacgc cgatgatgaa agtgaaaaga aagccaagca gatt
//
LOCUS       DATIRS010000110         2079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_8649, whole genome shotgun sequence.
ACCESSION   DATIRS010000110 DATIRS010000000
VERSION     DATIRS010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2079
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8649"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..883)
                     /locus_tag="VLM90_01350"
     CDS             complement(<1..883)
                     /locus_tag="VLM90_01350"
                     /inference="COORDINATES: protein motif:HMM:NF020390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1800 domain-containing protein"
                     /protein_id="HSQ11626.1"
                     /translation="MNTPLSHEQKIIHFLNRTSFGPTQVEIQRAGRIGIRAHLDEQLA
                     PERISDNAVDEKIAGLKTMRLNSRELIELYPPPRLQRQQANQQGGMAMESMDGPRVVI
                     LELQQAKLLRALYSNRQLYEVMVDFWSNHFNIYIAKGANRWLTTAYDRDTIRPLALGK
                     FKDLLIATAKSPAMLFYLDNWMSASPDSPRAQMGGPNNRRRGLNENYARELMELHTLG
                     VDGGYSQKDVQEVARCFTGWTIVQPQGQGVFRFEPRIHDNGEKTVLGQRIQRGGGMDD
                     GLRVIDILVKHPSTAQFI"
     gene            complement(887..1486)
                     /locus_tag="VLM90_01355"
     CDS             complement(887..1486)
                     /locus_tag="VLM90_01355"
                     /inference="COORDINATES: protein motif:HMM:NF022748.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3106 domain-containing protein"
                     /protein_id="HSQ11627.1"
                     /translation="MACLLSARASSQAAQPSAMAAQSEQEAGERWERMSPQEKSEMRE
                     RYQRWKNLDPKEKADLQDKFDNWRKLPSDERAAARRNFERFQKLTPEDRERLQKRWEE
                     YRKLSPERREEIKRRMQALRDMSPEKRQELRQKLLERRQQRVEEKLERREQRREHFDK
                     MPLQEKQELREKLRERKEQSRFEEKRRFGDKSQGGRDKE"
     gene            complement(1522..1773)
                     /locus_tag="VLM90_01360"
     CDS             complement(1522..1773)
                     /locus_tag="VLM90_01360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11628.1"
                     /translation="MNHRNWLPLTLLLATAQPALGATKETQLPDKEMLQIMEFLREME
                     MVKQMEMMRDLDHVESVGEQAKNSVPPKPSPVKKKETPK"
     gene            complement(1786..>2079)
                     /locus_tag="VLM90_01365"
     CDS             complement(1786..>2079)
                     /locus_tag="VLM90_01365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11629.1"
                     /translation="ELRHKIDAAVENKSWWQNFTAIFRPGYLPALATAAVVVLALTFT
                     LGGGLWSVKNGTPDVELTEALPVAENLEFFRAMDVLDELDLLEVMDSQGNNAA"
BASE COUNT          343 a          619 c          585 g          532 t
ORIGIN      
        1 cgatgaactg cgccgttgac ggatgcttga ccagtatgtc gatgacgcgc agaccatcgt
       61 ccatgccgcc gccgcgttga atgcgctggc cgaggacggt cttttcgccg ttgtcatgga
      121 tgcgcggctc gaaacgaaac acgccttggc cctgcggctg gacaatcgtc cagccggtga
      181 agcagcgggc gacctcctgc acatcttttt ggctgtaacc gccgtcgacg ccgagggtgt
      241 ggagctccat cagctcgcgc gcgtagttct cgttcaagcc gcggcggcga ttgttcggcc
      301 cgcccatttg ggcgcggggc gaatccgggc tggcgctcat ccagttgtcc aagtaaaaga
      361 gcatcgccgg gctttttgcc gtcgctatca acaaatcctt aaatttgcct agagccaatg
      421 gccggatcgt atcgcgatcg taggcagtgg tcagccaacg gttggcgccc ttggcgatat
      481 agatgttgaa atgattgctc cagaaatcca ccatgacttc gtagagctga cggttgctgt
      541 aaagcgcgcg caataacttg gcctgttgca gttcgaggat gacgacgcgc gggccatcca
      601 tggactccat ggccatgccg ccctgctggt tggcttgctg tctttgtagt cttggcggtg
      661 gatagagttc gatcagctcg cggctgttaa gccgcatggt tttcaacccc gcgatttttt
      721 cgtcgacggc attgtccgaa atccgttccg gcgcgagctg ttcgtcgaga tgggcgcgga
      781 tgccgatgcg gccggctctt tggatttcca cttgagttgg cccgaagctc gtgcggttta
      841 gaaagtggat aatcttttgc tcgtggctga ggggcgtgtt caaaggctac tccttgtctc
      901 tgccgccttg cgatttgtcg ccgaagcgcc gcttttcttc aaacctgctc tgttctttgc
      961 gctcgcgcaa tttttccctt agctcctgct tttcttggag cggcatcttg tcgaaatgct
     1021 cgcgcctctg ctcgcgccgc tctagcttct cctcgacgcg ctgctggcgc cgctccaaca
     1081 gcttttggcg cagttcctga cgcttctctg gtgacatgtc gcgcaacgcc tgcatgcgcc
     1141 gtttgatctc ttcacgccgt tcgggcgaca gcttgcgata ctcttcccag cgtttttgta
     1201 agcgctcgcg atcctctggc gtcagtttct gaaagcgctc gaaatttctc cgtgcggcgg
     1261 cacgctcgtc ggacggaagt ttacgccaat tgtcgaactt gtcctgcagg tcggcttttt
     1321 cctttggatc aagatttttc cagcgctggt agcgctcgcg catttccgat ttttcttgcg
     1381 gcgacattct ctcccagcgc tcgccggctt cctgttcgct ttgcgcggcc atcgcactgg
     1441 gttgagcggc ttggctcgat gcccgcgcgc ttagcaggca tgccacaagc ccaagtgcaa
     1501 tcgctgcttt gccaatgagc ttcacttggg ggtctccttc tttttcaccg gcgatggttt
     1561 tggcggcacg ctatttttgg cctgttcgcc gaccgactcg acatggtcta agtcgcgcat
     1621 catttccatc tgtttgacca tttccatttc gcgcaaaaac tccatgatct ggagcatctc
     1681 cttgtccggc agctgggttt ccttggtcgc ccccagtgcc ggctgcgcgg tcgccagcaa
     1741 tagcgtcaga ggcaaccagt tgcggtgatt catgagctgg tttccctagg cagcgttgtt
     1801 gccttggctg tccatgactt cgagcagatc caattcatcc aatacatcca tggcacggaa
     1861 gaattccaaa ttctccgcca ccgggagcgc ttcagtcaac tcaacgtccg gcgtgccgtt
     1921 cttgacggac cacaggccgc caccgagagt gaaggtcagc gccaagacca ccaccgcggc
     1981 ggtggccaga gcgggcaggt agccaggtct gaaaatcgcc gtgaaattct gccaccaaga
     2041 tttgttttca accgcggcgt cgatcttgtg gcgcaactc
//
LOCUS       DATIRS010000111         2430 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_205432, whole genome shotgun sequence.
ACCESSION   DATIRS010000111 DATIRS010000000
VERSION     DATIRS010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2430
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205432"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            78..521
                     /locus_tag="VLM90_01370"
                     /pseudo
     CDS             78..521
                     /locus_tag="VLM90_01370"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
     gene            675..2180
                     /locus_tag="VLM90_01375"
     CDS             675..2180
                     /locus_tag="VLM90_01375"
                     /inference="COORDINATES: protein motif:HMM:NF013086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HSQ11630.1"
                     /translation="METTGKHLNWDKEVDVLVVGYGAAGGIAAITARDAGAKVLLIEK
                     MPHPGGISILSGGGVAFAHNAEGAFQYLKRTCNGTTPDDILRKMAEEMVGMIDWVTEL
                     AKVSGTEPSKTETRGHGTYPFAGTNDIDSIKLKDFQAYDEFPWAKGLRGGARLFKVVY
                     DNVNCRNIEVLLSTPAKELILNSDGEVIGLVAEHNGKTIHIKANKGVILCCGGYENDD
                     ALKLQYFEAQPVYPVYLGNTGDGLKMAQKAGAGLWHMWHFHGGYGFKFAELPFAIRHV
                     WAGPRNENRRMIWIGVDKSGKRFMDEYPPAPQDTGTRALEYYDADIQDYPRIPCYLIF
                     DEEGRKLGPIGIPIVNDERYDASWSADNLAEIDKGWIKKGNSLEDIAAQIDVNPKVLR
                     ATVERWNDLCAKGQDEDHKRPPKTMMPIKTGPFYVMEAWPIVNNTQGGPEHDVKQRVL
                     DPMKRPIPRLYVAGEISSIYGHLYLEAGNITECFVAGKIAGQNAAAEQAWS"
     gene            complement(2209..>2430)
                     /locus_tag="VLM90_01380"
     CDS             complement(2209..>2430)
                     /locus_tag="VLM90_01380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11631.1"
                     /translation="CFLSELGVFAPWREEFPNPRIFDSRNIKAARYDKHVGVSFGIAI
                     RTARRFRMIKIPNFVLFVVTTIFASSIAA"
BASE COUNT          600 a          701 c          675 g          454 t
ORIGIN      
        1 agacccgtcc cgactacgaa gttcccggca aagcctgcat cgattatcta gtttcacgcc
       61 cttaagtcga cgccaatcgt gtcgcgctcc tgggcatcag catggccggt tattatgcgc
      121 cgcgcgtcgc agcatttgaa aaacggctca aagctctgat tgcctggagt ggctgttaca
      181 gcatattgga cgatctctac gactggtgtg tgcacctcca accggtctgt caacggctgc
      241 tcggcggcgt cagccacgaa gaggcgcgcc ggcaattgaa agacttcacc atggccggca
      301 gcgccaagaa cattacctgc ccgacgctga ttacccacgg cgacaaggac acgctgatgt
      361 ccgtcgaagg cgcgaagaag ttgttcaacg aaatcggcgc cactgataaa accttaaaaa
      421 tttacggcga agccgacggc ggcgggcgga ttcactgcag ccacgactac tgggcgcata
      481 atttgccgta catgttggat tggttggaag agagactgta actaaaagtc gggttcaaaa
      541 cgtttcaatc gttcaaccgc tgcgctccgt tcaatccccc gctaatctcc cccgcgacgc
      601 gggggagaac aaagaggggg cttgagcgat ttgaacgttt tgaacggatt gaactgtcat
      661 aaaggagaaa tattgtggag acaactggta agcatctaaa ttgggacaaa gaagtcgacg
      721 tgctcgttgt cggctacggc gccgcgggtg gcatcgcggc gatcaccgcc cgcgacgccg
      781 gtgcgaaagt tttattgatc gaaaaaatgc cccaccccgg cggcatctct attctctccg
      841 gcggcggcgt cgccttcgcg cataacgccg agggggcctt tcaatattta aaacgcacct
      901 gcaacggcac cacgccggac gacattctgc gcaagatggc cgaagagatg gtcggcatga
      961 tcgactgggt caccgaactc gccaaagtca gcggcaccga gccgtctaag accgagaccc
     1021 gcggccatgg cacctatcca tttgctggca ccaacgacat tgattcgatc aagctcaaag
     1081 acttccaagc ctacgacgaa ttcccctggg ccaaaggact gcgcggcggc gcccggctgt
     1141 tcaaagtcgt ctacgacaac gtcaactgcc gcaacatcga agtgctgctc tcgacgccgg
     1201 cgaaagaatt gattttgaat agcgacggcg aagtgatcgg cctggtcgcc gagcataatg
     1261 gcaagacgat tcatatcaag gctaataaag gcgtcattct gtgctgcggc ggctacgaaa
     1321 acgacgatgc cctgaagctg caatacttcg aagcgcagcc ggtctatccg gtctacctcg
     1381 gcaacaccgg cgacggcttg aagatggcgc aaaaagccgg cgccggcctc tggcatatgt
     1441 ggcattttca cggcggctac ggctttaagt ttgccgagct gcccttcgcc atccgccatg
     1501 tctgggccgg accgagaaac gagaaccgca ggatgatttg gattggcgtc gacaaatctg
     1561 gcaagcgctt catggacgag tacccgcccg cgcctcagga caccggcacc cgggcgctgg
     1621 aatactacga tgccgacatc caggactatc cgcgcatccc ttgctatcta atcttcgacg
     1681 aggaaggcag aaagctcggc cccatcggca tcccgatcgt caacgacgag cgctatgacg
     1741 ccagctggag cgcggacaat ctcgccgaga tcgacaaagg ctggatcaaa aaaggcaact
     1801 cgctggaaga catcgcggcg cagatcgacg tcaaccccaa agtgctcaga gccacggtgg
     1861 aacggtggaa cgacctctgc gccaaaggcc aggacgaaga tcacaaacgg ccgccgaaaa
     1921 ccatgatgcc gatcaagacc ggcccgttct acgtcatgga ggcctggccc atcgtcaata
     1981 atactcaggg tggccccgag catgacgtga aacagcgcgt gctcgatccg atgaaacgac
     2041 ccatcccacg cctctacgtc gccggcgaga tcagctcgat ttacggccat ttgtatttgg
     2101 aagcgggcaa catcaccgaa tgcttcgtcg cggggaagat cgccgggcag aatgccgcgg
     2161 cggagcaagc gtggtcctga gcggtcgatt gtgaatagag cagcgtgatc acgccgcaat
     2221 cgacgaagca aagattgtcg tcaccacgaa gagcacgaag ttcggaattt taatcatccg
     2281 aaaccttcgt gccgttcgta ttgctatccc aaaactaaca ccaacatgtt tgtcatagcg
     2341 tgcggcttta atattccggg agtcgaagat tctcggattc ggaaattcct ctcgccaagg
     2401 cgcaaagacg ccaagttcgg aaaggaaaca
//
LOCUS       DATIRS010000112         4708 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_303782, whole genome shotgun sequence.
ACCESSION   DATIRS010000112 DATIRS010000000
VERSION     DATIRS010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4708)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4708)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4708
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_303782"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..792)
                     /locus_tag="VLM90_01385"
     CDS             complement(<1..792)
                     /locus_tag="VLM90_01385"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HSQ11632.1"
                     /translation="MNTTNEILKGVRILAFTTGYAGPYAGRLLANYGAEVIKIESRKG
                     GLDTFRHYGQHKDIDEAPRFIECNLGVRSLSINLKNPTGAKLIRELAGKSHAILENFR
                     PRVLDKLGLGDDELRKVNPKLVVVKLPGFGTEGPKSSYGTWGFNLTAFSGITYLWNHP
                     EQDRPIGSQGVYPDHLGFVLGPTMMIAALLKSRRSGKGVTIDLAQIEGTAAVLGTTYL
                     ETSVNGDDPKPKGNHYALAAPHGVYRCQGEDRWCVISVRDDAEWRA"
     gene            complement(893..2101)
                     /locus_tag="VLM90_01390"
     CDS             complement(893..2101)
                     /locus_tag="VLM90_01390"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HSQ11633.1"
                     /translation="MIEITNATPLLPGYRVLDLSSSMGAFCGKVLRDLGMEVIKIEPP
                     GGDAGRLEAPFAKGHAHREGSLRFAYLNGGKKSITLDIAKDSGRKIFLDLVAKADIVL
                     ETFAPGEFAARGLGYAQLLEKHSKLILVSLTGFGQDGPYAHYKAPDIVGNAMGALLYI
                     SGDPKMTPCNPPETQAYYYASLMACYGTMLALWQRELRGIGAWIDGSVQASMALHEHV
                     AFNFSSDGRVMKRAGSQHQHNAPANLFQCQNGWIALFVTQTHWPLLLKVWDHHEPALD
                     DPKWINSNLRRQQADYINAQVTSFTMRYTKEDLAELMQKHGIPGLPVNSPSDFMKDPH
                     IQARGFFSQVTHPVLGSFDAPGNFFTVDGKRGGPSPAPLVGQHNDEILRGELGLGTSE
                     LAALAAEGVI"
     gene            complement(2214..3377)
                     /locus_tag="VLM90_01395"
     CDS             complement(2214..3377)
                     /locus_tag="VLM90_01395"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSQ11634.1"
                     /translation="MDFNLPEELQILKATVRKFVDRELIPLERECRPEGEDMPEQFIK
                     PLQEKAKAIGLWLLDVPQEYGGAGLDLMSRCVIMEEVARTIAIPFRYAPIFGPEVRPV
                     LFHCNDEQKKRFLQPVIDGKMRICFAQTEPDAGSDPAGMKTRAVKDGDHYVINGTKRF
                     ITAAKTADYAQVIAVTDPVKGARGGVSCFMVSMKAPGVTLEKLWPTMMGDTPGQIHFE
                     NVRVAAADMIGGEGQGFSIAQKWIEEGRVRGHGARPVGIASRALDMMIEYSKVRTTFG
                     QPLANRQAIQFMIADSAMEMHACRLMVYECAWRHDRGEDIRQLSYMTKIQCAEMATRV
                     VDRSIQVHGGLGLMRELPLEWWYRQVRSLRITEGTPEVLRWRLAEHIIRNHKG"
     gene            complement(3484..4323)
                     /locus_tag="VLM90_01400"
     CDS             complement(3484..4323)
                     /locus_tag="VLM90_01400"
                     /EC_number="4.1.2.61"
                     /inference="COORDINATES: protein motif:HMM:NF006588.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="p-hydroxycinnamoyl CoA hydratase/lyase"
                     /protein_id="HSQ11635.1"
                     /translation="MAATLWKEYKTVRVEKEDGTTWVILNRPEKRNAMNPQLHYDMLE
                     ALTELEVDKETQVLVLTGAGPSWCAGQDLREYVRGTDNNALELRKASWASQEWRWRRL
                     FWFPKPTIAMVNGFCFGGAFTPLIACDFAIAAEDATFGLSEVNWGIFPGGLVSRVLAD
                     AMCYRDAMWCIMTGDPFDGKKAAEMKLINYAVPKDKLRAETMALADKLKKKNPAVLRA
                     AKEVYKHCRTMDYGQAEEYMSAKGTALRLTDPEKGRETGMEQFLDKKSYRPGLGEYDR
                     NAK"
     gene            complement(4425..>4708)
                     /locus_tag="VLM90_01405"
     CDS             complement(4425..>4708)
                     /locus_tag="VLM90_01405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11636.1"
                     /translation="FVKQNKKESLDIVKKKLRLGPEQERNLERSLDLLIAKYYENIPY
                     PSIRGVETVLGFIEKDNPKAKTADPKSFVDDSLLREIEQSGFVKTLYAK"
BASE COUNT          938 a         1420 c         1281 g         1069 t
ORIGIN      
        1 ggcccgccac tcggcatcgt cgcgcaccga gatcacacac caacgatctt ccccctggca
       61 acgatagaca ccatgaggcg cggccaaagc gtagtgattg cccttgggct tggggtcgtc
      121 gccgttcacc gaagtttcca aataagtcgt gcccaacacc gccgcggtac cttcgatctg
      181 cgccaggtcg atggtcacgc ctttgccgct gcgccggctc ttcaacaatg ccgcgatcat
      241 catcgtcggc cccaggacaa agccgagatg atcgggatag accccctggc tgccaatggg
      301 gcgatcctgc tcggggtgat tccaaagata ggtaatgccg gagaaagctg tcagattgaa
      361 tccccaggtg ccgtagctgc tcttcggccc ttcggtgccg aaaccgggca gtttcacaac
      421 cacaagtttc ggattaactt tgcgcaactc gtcatcgcct aaacccagtt tatccaatac
      481 cctagggcga aaattctcca atatcgcatg cgatttgccg gcgagctcgc gaatcagctt
      541 agcgccggtg ggatttttta gattgatcga cagcgagcgg actccgagat tgcactcgat
      601 gaagcgcggc gcctcatcga tgtctttatg ctggccgtaa tggcgaaagg tatcgaggcc
      661 gcccttgcgc gactcgatct taattacttc cgcgccatag ttggccagca acctgccggc
      721 gtaggggccg gcgtagccgg tggtgaaagc aaggatgcgc acacccttca atatttcgtt
      781 agtcgtgttc atgttcagct cagattaaga aattccaaat tccagattac atattccaga
      841 ctaaggcgag ttcttgccga tttggaatct ggaatctgta atttggaatt attcagatga
      901 ccccttccgc cgccaatgcc gctagctcgc tcgtgcccaa gcccaattcg ccgcgcaata
      961 tttcatcgtt gtgctggccg acgagcggcg cgggagacgg ccccccgcgc ttaccgtcca
     1021 cggtaaagaa attacccggc gcgtcgaagc tgccgagcac cggatgcgtt acctggctaa
     1081 aaaagccgcg cgcctgaata tgcggatctt tcatgaagtc cgaaggggaa ttcaccggca
     1141 gtccggggat accgtgcttc tgcatcagtt ccgccagatc ttccttcgtg taacgcatcg
     1201 tgaacgaggt cacctgcgcg ttgatgtagt cggcctgctg ccgccgcagg ttgctgttga
     1261 tccacttggg atcgtccagc gccggctcgt gatggtccca aaccttgagc agcagcggcc
     1321 agtgggtctg cgtgacgaac aaggcgatcc agccattctg gcactgaaac aaattcgccg
     1381 gtgcgttatg ctgatgctgg ctaccggcgc gtttcatcac ccggccgtcg gaagaaaagt
     1441 taaacgccac atgctcgtgc agcgccatgc tcgcctgcac cgagccgtcg atccaggcgc
     1501 cgatgccgcg tagctcgcgc tgccacagcg ccaacatcgt gccatagcaa gccatcaagc
     1561 tggcgtaata ataagcctgc gtctccggcg gattgcacgg cgtcatcttc ggatcaccgc
     1621 tgatgtaaag caacgcgccc atggcgttgc cgacgatatc cggcgctttg taatgagcgt
     1681 acggcccgtc ttggccgaag ccggtgagcg aaaccaggat caacttgctg tgcttttcca
     1741 gcagctgcgc atagccgaga ccgcgcgcgg cgaactcgcc cggcgcgaat gtttcaagca
     1801 cgatgtcggc cttcgccacc agatcgagaa atatctttcg cccgctatct ttggcgatat
     1861 cgagcgtaat acttttttta ccgccattga gataggcgaa gcgcaagctg ccctcgcggt
     1921 gcgcatggcc cttggcgaag ggcgcctcca agcgcccggc gtcaccgccc ggcggctcga
     1981 ttttgatcac ttccatgccg agatcgcgca gcaccttgcc gcaaaacgct cccatggagg
     2041 aactcaagtc gaggacgcga tagccgggga ggagtggggt tgcgttggtg atttcaatca
     2101 tgtgcagggt ttgatcgaag tgtagaatcc tctgatttcg aggatggacg atggagaatt
     2161 gacaatagag aatcgccaga cgccatactc gatcctctat cctcgaccgt tcttcatccc
     2221 ttatgattgc gaataatatg ttccgccagc cgccagcgca gcacctccgg cgtgccttcg
     2281 gtgatgcgca ggctgcgcac ttggcggtac caccattcaa gcggtaattc gcgcatgaga
     2341 cctaaaccgc catggacctg aatcgagcgg tcgaccaccc gggtggccat ctcggcgcac
     2401 tgaattttcg tcatgtacga taattgacga atatcttcgc cacgatcatg gcgccaggcg
     2461 cattcgtaaa ccatcaagcg gcaagcgtgc atctccatcg ccgagtcggc gatcatgaac
     2521 tgaatcgcct ggcggttggc cagcggctgg ccgaaggtgg tgcgcacctt ggaatattcg
     2581 atcatcatgt cgagggcacg cgacgcgatg cccaccggcc gcgcgccatg gccgcgcacg
     2641 cgcccctctt cgatccactt ttgcgcgatg gaaaatccct gcccttctcc gccgatcatg
     2701 tcggccgccg ccacgcggac attttcaaaa tgaatttgcc ccggcgtgtc gcccatcatg
     2761 gtcggccaga gcttttccag cgtcacgcct ggcgctttca tgctaaccat gaaacagctg
     2821 acgccgccgc gcgcgccctt gaccggatcg gtgactgcga tcacctgcgc gtagtcagcg
     2881 gtcttggcgg ctgtgataaa tcttttagtg ccgttgatga cgtaatgatc gccgtctttg
     2941 accgcgcgag ttttcatgcc cgccggatcg ctgccggcat ccggttcggt ctgggcgaaa
     3001 caaatgcgca tcttgccgtc gatcaccggc tgcaagaaac gtttcttctg ctcgtcgttg
     3061 cagtgaaaca acaccggccg cacttcgggt ccaaagatcg gcgcgtaacg aaacgggatg
     3121 gcgatggtgc gcgcgacttc ttccatgatc acgcagcggc tcatcaagtc gagccccgcg
     3181 ccgccatact cttgcggcac gtcgagtagc caaaggccga tcgccttggc tttctcctgc
     3241 agcggcttga tgaactgctc cggcatatct tcgccttccg gccggcactc ccgctccagc
     3301 gggatcagct cgcggtcgac gaatttacgc accgtggctt taagaatttg caattcttcg
     3361 gggagattga agtccattga ctgctccggc cattgccctc accctaaccc tctcccagag
     3421 ggagagggaa gagtgaggac gatccgaatt gaaccttgaa cgcttgaact ttgaacgcga
     3481 agcctatttc gcgttccggt cgtactcgcc caaccccggc cggtagctct tcttatcgag
     3541 gaactgttcc atgccggtct cgcggccctt ttccggatcg gtgagacgca acgccgtgcc
     3601 cttggcgctc atgtattctt ccgcctggcc gtagtccatg gtgcggcaat gtttgtagac
     3661 ttccttggca gcgcgcaaca ccgcgggatt tttctttttc agcttgtcgg cgagagccat
     3721 ggtctcggcg cgcagcttgt ctttcggcac ggcatagttg atcagcttca tttcagcggc
     3781 ttttttgcca tcgaacggat cgccggtcat gatgcaccac atggcgtcgc ggtaacacat
     3841 ggcgtcggcc agcacccggc tgaccaagcc tccggggaaa atcccccaat tcacttcact
     3901 caaaccgaag gtcgcgtctt ccgccgcgat ggcgaagtcg caagcgatca gcggcgtaaa
     3961 tgcgccgccg aagcaaaagc cgttgaccat ggcgatggtc ggcttgggaa accagaacag
     4021 ccggcgccag cgccactcct gcgacgccca gctcgccttg cgcagttcca atgcattgtt
     4081 atccgtgccg cggacatact cgcgcaggtc ctgccccgcg caccagctcg gcccggcgcc
     4141 ggtgagaacc aacacctggg tctctttgtc gacttccaat tcggtcaagg cttcgagcat
     4201 atcgtagtga agctggggat tcatcgcgtt acgcttctct gggcgattga gaatcaccca
     4261 agtcgtcccg tcctcttttt cgaccctgac ggtcttatat tctttccata aggttgcagc
     4321 cacgtttctt acctccttag tttaatttca aatttaaaca attcttattc gagccactgg
     4381 gaagctgtca agcggattca gccgaatgtt tcactcggta acggttattt cgcgtacagc
     4441 gttttgacaa aaccgctctg ctcaatctcg cgcagtaaac tatcgtcgac gaaggatttt
     4501 ggatcggctg tcttggcttt cggattgtcc ttctcgatga agccgagtac ggtttcgacg
     4561 ccgcgtatcg acggatacgg gatgttttca taatattttg caatcagtag gtccagggag
     4621 cgctcgaggt ttcgttcctg ttcgggcccg agtcgaagtt ttttcttgac gatgtccaag
     4681 ctctcctttt tgttctgttt cacgaacg
//
LOCUS       DATIRS010000113         2081 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1090441, whole genome shotgun sequence.
ACCESSION   DATIRS010000113 DATIRS010000000
VERSION     DATIRS010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2081
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1090441"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(257..1186)
                     /locus_tag="VLM90_01410"
     CDS             complement(257..1186)
                     /locus_tag="VLM90_01410"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HSQ11637.1"
                     /translation="MKILFFNDFKLGVLKGDSVVDVSPAVQDIPHTGPHNLISGLIER
                     FADYRSALEKAAAAGSGVALKSVRIRPPLPKPVNIDCMAVNYMEDGTRKEPAPINAFH
                     KSPNSVIGNGDTMILPDVPAPIFEGEAELALVIGKRADNVPAAQAMDYIFGYMNFVDG
                     SARGLPPAGNTFYQMKSRATFAPTGPFIVTADEITDPHNLHVRLWNNGVLMQNYHTSD
                     MAHKIPRCIEWVSSIHPLEPGDILALGTNHRGLNPFQDGDAIEIETEPLGRLHVKVRD
                     ELKRTWARETRLQRQEKGQEGFTPQLTGKYAKD"
     gene            complement(1361..2008)
                     /locus_tag="VLM90_01415"
     CDS             complement(1361..2008)
                     /locus_tag="VLM90_01415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HSQ11638.1"
                     /translation="MNSEDFLQEILTPVNEFCRVLDSNPPAYSYVPLRTDEQRIRVMQ
                     SRLFNELRAADLFGTWLKTTPELDVKATMAESAHEEMVHAQLLAKRMSDLGADPFDYK
                     PLPAQIAMFNAMEGLNETCERIAGFSLAGETIANYLIQMCLKSPVVPEWIKQPYRKIT
                     EDEEGHGSVPQLFLKRYATTEERQDRVRRAVAMRMVLFREYLASLDRWAMGQDRW"
BASE COUNT          445 a          610 c          568 g          458 t
ORIGIN      
        1 ttattcatga ggttactccc tttctactat gtgactattg tgcgttactt cgaaacccat
       61 tcggcaaggc agccaacggg gcggctcggc tctatgctaa tttcgcgtat atatacgatg
      121 gtggcgttgt tgtccaatcc aaatcaccgc gaggaaccga cgatgattat cgtcaacgcc
      181 gccgacaaaa ttattcgcat catcgtagcc ataccgccgc cttcacgagc acgaccacaa
      241 accacgaaca cgccatctaa tctttggcgt acttaccggt aagctgcggc gtgaatcctt
      301 cctggccctt ttcttgccgc tgcaagcgcg tctcgcgcgc ccaggtacgc ttgagctcgt
      361 cgcggacctt cacatgcaac cggcccaacg gttcggtttc gatctcaatc gcatcgccgt
      421 cttgaaacgg attgaggccg cggtgattcg tgcccaaagc aagaatatcg cccggctcca
      481 acggatggat cgagctcacc cattcgatac agcggggaat tttatgggcc atgtcgctgg
      541 tgtgatagtt ctgcatcaac acgccgttgt tccacagccg cacatgaaga ttatgcggat
      601 cggtgatttc atcggcggtg acgatgaacg gcccggtggg cgcgaaagtc gcccgcgatt
      661 tcatctggta aaaagtattg ccggccggcg gcagaccgcg cgcggaccca tcgacgaaat
      721 tcatatagcc gaagatataa tccatcgcct gggctgccgg gacattgtcg gcgcgcttac
      781 cgatcacgag cgctaactcg gcttcgcctt cgaatatcgg cgccggcaca tcgggtagaa
      841 tcatggtatc gccgttgccg atgaccgagt ttggcgactt gtgaaaagcg ttgatcggcg
      901 ccggctcttt gcgcgtgcca tcctccatat agttgaccgc catgcagtcg atgttaaccg
      961 gcttgggcag cggcgggcga atccgtacgc tcttgagcgc cacgccgctg ccagccgccg
     1021 ccgccttttc aagggcgctg cgataatcgg cgaaacgttc gatcaaaccg ctgataagat
     1081 tatgcggccc ggtgtgtgga atgtcttgca ccgccggcga cacatccacg acgctgtcgc
     1141 ctttaagcac gccgagtttg aaatcgttga aaaaaagaat cttcatttcc cctccaagtt
     1201 tgattacgac atagcggatg tggtgcccac actttaatga gaaaaaactc aggggcgagt
     1261 ttcaaacccg cccctacgaa tcccaaatcc ttttattgcg ttgtttgcgg caagacttcc
     1321 tagccggacc gggcggcacc ggcccccata aggacgaaac tcaccagcga tcctggccca
     1381 tcgcccagcg gtcgaggctg gcgagatatt cgcggaacag caccatgcgc atcgccaccg
     1441 cgcggcgcac ccggtcctgg cgttcctccg tggtagcgta acgtttgaga aacagctggg
     1501 gaacgctgcc atggccttct tcgtcttcgg taatctttct gtagggctgc ttgatccact
     1561 cgggcacaac cggcgatttg aggcacatct gaatcaggta gttggcaatg gtctcacccg
     1621 ccagcgaaaa cccggcaatg cgctcgcagg tctcgttcaa accttccatg gcgttgaaca
     1681 tggcgatctg cgccggcaac ggtttgtagt cgaaggggtc ggcacccaag tcgctcatgc
     1741 gcttggcaag caactgcgca tgaaccatct cttcatgggc cgactcggcc atggtcgctt
     1801 tgacatcgag ttcgggagtc gtcttgagcc aggtgccaaa aagatcggcg gcgcgcagct
     1861 cattgaacaa gcggctctgc atcacgcgga tgcgttgttc gtccgtgcgc agcggcacat
     1921 aggaataggc cggcggattg ctatcgagca cgcggcaaaa ctcattcacc ggcgttagta
     1981 tttcttgaag gaagtcttcg ctgttcatag aacgagcctc actcgactcg cggcactccg
     2041 tcgagaatag aggatggagg atcgaagttc gccatcatcc a
//
LOCUS       DATIRS010000114         1797 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1483731, whole genome shotgun sequence.
ACCESSION   DATIRS010000114 DATIRS010000000
VERSION     DATIRS010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1797
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1483731"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..273)
                     /locus_tag="VLM90_01420"
     CDS             complement(<1..273)
                     /locus_tag="VLM90_01420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11639.1"
                     /translation="MRRQTFATLTLLLFLLLLCYRLPSIANAAVPGKIILGYAAPARA
                     LPFWVAQDLGLFLKYGVDVEPVFIRGAPILVAGLASGDIHVGSTGGS"
     gene            complement(529..1533)
                     /locus_tag="VLM90_01425"
     CDS             complement(529..1533)
                     /locus_tag="VLM90_01425"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ11640.1"
                     /translation="MIFFTLFTGQLLCALPAFAAAPSKLVIGYAAMSARVMPLWVAEE
                     QGSLGKYGIESDQIFIRGAPTLVAGLASGDIHIGSTGGSATLAAIAAGHDLKMLAAFS
                     SRNTYDLVTRPSIKKAEELRGKRFGVTSIGGTVWMGIMLWLEHFGLDDQRDKIQIQVI
                     GDQTIQMQALENGTIDAAVLDGVFSRRLKQKGFNITGEYAELKHLYTSQAIVVQGKLL
                     QQRPDMLENLLKAQVEAIAFSLAPKNKPTVIKTFMRRLRIDAVTAEEGYADLHRAVDR
                     KPYASVEGMRNVQRLMALRNPKVGEVKIDNIVDNRIIKKLDDSGFIDKAYAAQGTSSK
                     "
BASE COUNT          372 a          488 c          532 g          405 t
ORIGIN      
        1 gctgccaccg gtgctgccga catggatatc tcccgaagcc aggccggcga ccagaatcgg
       61 cgcgccgcgg ataaaaaccg gttcgacatc tacaccgtat ttaaggaaca gtccgagatc
      121 ttgagccacc cagaagggca atgcgcgggc gggcgcggcg tagccgagaa taatcttacc
      181 gggaacggct gcattggcga tggacggaag ccggtaacaa agcaacaata aaaagagcaa
      241 aagtgtaagt gtcgcaaaag tttggcggcg catcggtgtc atatccttct gtgaactttg
      301 cactgcaata gctcaacgat tgcgtggctt gcgcaaattt tccgtaccgg tactcctaat
      361 tgccgtgctc aatgaagaaa tccaatctca ccacgaagga cacgaagagc acgaagttcg
      421 gagtaataat tttccgaacc cttcgtgtcc ttcgtgagct tcgtggtgaa aactctttcc
      481 catttggttg cggctgtgcc gcgctaagtt cttagcggct aaaagctctt atttagagct
      541 cgtgccttgg gcggcgtagg ctttatcgat aaagccgctg tcatccaatt tcttgatgat
      601 ccggttgtcg acgatattgt cgatcttgac ctcgccgact ttcgggttgc gcagcgccat
      661 cagccgctgc acgttgcgca tgccttccac ggaagcgtag ggcttgcggt cgacggcgcg
      721 gtgcaggtcg gcatagcctt cttcggcggt cacggcatcg atgcgcagcc ggcgcatgaa
      781 ggttttgatg accgtcggtt tgttttttgg cgctagcgag aaggcgatcg cttcgacttg
      841 agctttcaag agattctcta gcatgtcagg ccgttgttgg agcagcttgc cctgcacgac
      901 gatggcctgg ctggtgtaaa gatgcttgag ctcggcatat tcgccggtaa tgttgaagcc
      961 cttttgcttc aagcgccggc taaacacgcc gtcgagcacg gcggcatcga tggtgccgtt
     1021 ttccaacgct tgcatctgga tcgtctggtc gccgatcacc tgaatctgaa tcttgtcgcg
     1081 ctggtcgtcg agaccgaagt gctcgagcca tagcatgatg cccatccaaa ccgtgccgcc
     1141 gatgctggtg actccgaagc gtttgccgcg cagctcttcg gctttcttga tcgacggccg
     1201 ggtgaccagg tcgtaagtgt tgcggctgga aaaggccgcg agcatcttca aatcatggcc
     1261 ggcggcgatg gcggctaacg tcgcgctgcc gccggtgctg ccgatgtgaa tatcgcccga
     1321 ggcgagaccg gcgaccaggg tcggcgcgcc gcggatgaaa atctgatcgg actcgatgcc
     1381 gtatttgccg agactgcctt gctcctcggc gacccacaga ggcatcaccc gcgcgctcat
     1441 cgctgcgtag ccgatcacca gcttcgacgg cgcggcagcg aaagcaggca gggcgcaaag
     1501 gagctggccg gtgaacagag tgaaaaagat cacgctggat aggtgatggc ggtgtctcat
     1561 ggtgtgtctt tcctgagatt catattacgc gcccaaaact tcctgccgcg cgttgtgatt
     1621 aacggatcat ttcaaactta ctccctgggc ggcgtaggcg cgatcgatga agccggactc
     1681 atcgagcttg cgcatgatgc ggtcgtcgat gacggtctcc actttaatat cgccgagctt
     1741 gggattgcgc ggcttcaaaa tgcgctgaat attgcgcatg ccttccaagg acggaaa
//
LOCUS       DATIRS010000115         2104 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1778777, whole genome shotgun sequence.
ACCESSION   DATIRS010000115 DATIRS010000000
VERSION     DATIRS010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2104
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1778777"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            357..722
                     /locus_tag="VLM90_01430"
     CDS             357..722
                     /locus_tag="VLM90_01430"
                     /inference="COORDINATES: protein motif:HMM:NF015690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF309 domain-containing protein"
                     /protein_id="HSQ11641.1"
                     /translation="MEPQDDPRFIKGIEEFNNGLYFECHETLEEIWLEEHGEERKFYQ
                     GIIQIAAGYYKLEQGVPAGALKLWRMGMEKLQAYSPVYLGVNVDALVAGVGANLAALE
                     KDQQQTASALGAPTIQLFC"
     gene            735..1424
                     /locus_tag="VLM90_01435"
     CDS             735..1424
                     /locus_tag="VLM90_01435"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ11642.1"
                     /translation="MIRCTDVGKVYQQGENRIIALAGVSLEIPRGAFAAVMGQSGSGK
                     STLLHLIGGLDRPSSGELLVDGRLIGQMADDQVTLFRRNQIGFIFQFFNLLPTLTAAE
                     NIALPFVLDGRSKAEADTRAAALLAKVGLQHRQQHLPEALSGGEIQRVAIARALAFNP
                     PILLADEPTGNLDSQNGNAILDLLRLVNRQDGCTIVIVTHSEEAAGYADRKIYLRDGR
                     VERVEENQTKG"
     gene            1494..>2104
                     /locus_tag="VLM90_01440"
     CDS             1494..>2104
                     /locus_tag="VLM90_01440"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ11643.1"
                     /translation="MAFESMGDFITAADQVGEVLHVEGADLEMDVGGLTELTAEKNGP
                     MVLFDKFAGYPAGFRVAANANRTLRRFALAMGLPLDIHPLELLRRWRDKRADAKPIAA
                     RVVKDGPVLANVQQGDAVNIENFPAPRWHPGDGGRYIGTQDMVIVRDPEQGWVNMGCY
                     RAMVQRRDRVSLWINPQKHGRILAQKYWRDGKAAPVAVVFGCEP"
BASE COUNT          445 a          573 c          659 g          427 t
ORIGIN      
        1 aagcctgtcg atatctagtt ctagttcggt tttcgggata ggttgtgaaa tatgttcggt
       61 aatcaaagtg tgacaactta atcacaatgg cacttgggcg gcaatgccgc gactgaacga
      121 ctcttcacca cgaagacgcg aagggcacga aggacggaag aagagtttca ccacagtaga
      181 gggaagattg ggattcggaa tactctcgca aaggcgctaa ggcgcaaagg tgacgggctg
      241 acgcccatca tccggagtca tcgcaattcc gaccttagcg tctttgcgac tttgcgagag
      301 ataatccgag gctgcttttg attttgcagt gctcggttct gaccggtgcg gcgattatgg
      361 aaccacaaga cgatccgcga ttcatcaagg gcattgaaga gttcaacaat ggattatatt
      421 tcgagtgcca cgagacactc gaagagatct ggctggagga gcatggcgag gagcgcaaat
      481 tttatcaggg catcattcaa atcgcagctg gctattacaa gcttgaacag ggcgtgccgg
      541 cgggcgcgtt gaagctctgg cgcatgggta tggaaaaact ccaggcttac agcccggtgt
      601 atctcggcgt caacgtcgac gccctggtgg ctggcgtcgg cgccaatctt gccgcgttgg
      661 aaaaagatca acagcaaacc gccagcgctt tgggtgcgcc gaccatccag ctgttctgtt
      721 aaccctgccg cttcatgatt cgctgcaccg acgttggcaa agtttatcag cagggcgaaa
      781 accggattat cgcccttgcc ggtgtgtcgc tggagattcc ccgtggcgca ttcgcggcgg
      841 tgatggggca gagcggttcg gggaaaagca cgctgctgca tctgatcggc ggcttggacc
      901 ggccgagcag cggcgagttg ctggtcgacg gccggttgat cggtcagatg gcggacgatc
      961 aagtgacgct gtttcgccgc aaccagatcg gtttcatttt tcagtttttc aatctattgc
     1021 cgacgttaac cgcggcggaa aacatcgcgc tgcccttcgt gctcgacggc cgcagcaagg
     1081 ccgaggcgga tacgcgcgcc gccgcgctgc tggccaaagt cggtttgcaa catcgccaac
     1141 agcatctccc cgaggcgctt tccggcggcg agattcagcg cgtggccatc gcccgggcgc
     1201 tggcgttcaa cccgccgata ctgctcgctg acgaacccac cggcaacctc gattcacaaa
     1261 acggcaacgc tatcctcgac ctgttgcgcc tggtcaaccg ccaggacggt tgcaccatcg
     1321 tcatcgtgac ccatagcgag gaggcggcgg gatatgccga tcggaagatt tacttgcgcg
     1381 atgggcgggt ggaacgggta gaagaaaatc agacgaaggg gtaaggagta aggagtttgg
     1441 agtccccacc gctaactcct tactattcac tccttactgt ttctggagga agcatggcat
     1501 ttgaatcgat gggtgatttt atcaccgcgg cggaccaggt cggcgaggtg ttgcatgtcg
     1561 aaggcgcgga cttggagatg gatgtcggcg gattgaccga actgacggcg gaaaaaaacg
     1621 ggccgatggt gctgttcgac aagttcgccg gctatccggc gggctttcgc gtcgccgcca
     1681 acgccaaccg cacgctgcgc cgttttgctt tggccatggg tttgcccctc gacattcatc
     1741 cgttggaatt gctgcgccgc tggcgcgaca agcgggcgga tgcaaaaccg attgccgcgc
     1801 gggtggtcaa agacggaccg gtgctggcca acgtacagca aggcgacgcc gtcaacattg
     1861 aaaacttccc cgcgccgcgt tggcatcccg gcgacggcgg ccgctacatc ggcactcagg
     1921 atatggtgat cgtccgggat cccgaacagg gctgggtcaa catgggctgc tatcgcgcca
     1981 tggtgcagcg ccgcgaccgc gtcagcctgt ggatcaatcc gcaaaagcat gggcgcattc
     2041 tcgcgcaaaa atattggcgc gatggcaagg ccgcgccggt ggcggtggtg ttcggctgcg
     2101 agcc
//
LOCUS       DATIRS010000116         1729 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_599164, whole genome shotgun sequence.
ACCESSION   DATIRS010000116 DATIRS010000000
VERSION     DATIRS010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1729)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1729)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1729
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_599164"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1106
                     /gene="egtD"
                     /locus_tag="VLM90_01445"
     CDS             <1..1106
                     /gene="egtD"
                     /locus_tag="VLM90_01445"
                     /EC_number="2.1.1.44"
                     /inference="COORDINATES: protein motif:HMM:NF021530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030745 - dimethylhistidine
                     N-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0052699 - ergothioneine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="L-histidine N(alpha)-methyltransferase"
                     /protein_id="HSQ11644.1"
                     /translation="LWARAGFKPGSRIQLISFIVTPTMEQQTLPTIFSADETSRWSSD
                     AAGIWSLRGADLDSLPTLSILTTLWDHPRWLEAYHLYDDQGSQLFEDICELPEYYLTR
                     TENSILEIQAKNIIAAAPVECIVELGAGYSKKTIHLLTEQLRQRGGCQFAPIDVSIAG
                     LLASQTAVRRDFPQIQFHGIHSRYQEGFSAVDKNLPTLFVFLGSTIGNFNQTEFPRFF
                     RALADAMGANDYLLLGADRVKDKTILEPAYNDSRGITAAFILNVFGNINRLLGANFDR
                     AKMRYHSWFNPEWQQIEMYAVANEAQTVSFPSAKAAFTWNKNERILVEISRKFEPNRL
                     QEQLGFLGLQPVAHYTDPQEWFSVLLLRKSAQR"
     gene            complement(1252..1605)
                     /locus_tag="VLM90_01450"
                     /pseudo
     CDS             complement(1252..1605)
                     /locus_tag="VLM90_01450"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          408 a          551 c          442 g          328 t
ORIGIN      
        1 ccctttgggc gcgagcgggg ttcaaacccg gctcgcgaat tcaattgatt tcttttatag
       61 tcaccccgac catggaacag caaaccttac cgactatttt cagcgccgat gaaacttcac
      121 gctggtcctc cgacgcggcg ggaatctggt cgctgcgcgg cgccgatctc gactcgctgc
      181 cgacgttgtc gattttaacc accctgtggg accacccccg ctggctcgag gcctaccacc
      241 tgtacgacga ccaaggctcg cagctcttcg aagatatctg cgaactgccg gaatactatc
      301 tgacccgcac cgagaatagc atcctagaaa ttcaggcaaa aaacatcatc gccgccgcgc
      361 cggtagagtg catcgtcgag ctcggcgccg gttacagcaa aaaaaccatc cacctgctca
      421 ccgaacaatt gcgccagcgc ggcggctgcc agttcgcgcc catcgatgtc agcatcgccg
      481 gtctgctcgc ctcccaaacg gcggtgcgcc gcgatttccc gcaaatccag ttccacggca
      541 tccactcgcg ctaccaagaa ggtttctccg ccgtcgacaa gaatctaccg acgcttttcg
      601 tctttctcgg cagcaccatc ggcaacttca atcagaccga gttcccgcgc ttcttccgcg
      661 ccctcgcgga tgcgatggga gccaacgatt atttgctcct gggcgccgac cgggtcaaag
      721 acaagactat tctggaaccc gcctacaacg acagccgcgg catcaccgcg gcatttattt
      781 tgaacgtgtt cggcaacatc aaccggctgc tcggcgctaa cttcgatcgc gccaaaatgc
      841 gctatcactc ctggttcaat cccgagtggc agcagatcga gatgtacgcg gtggccaacg
      901 aagcccagac cgtcagcttc cccagtgcca aagcagcttt tacctggaat aagaatgaac
      961 gcatcttggt agaaatcagc cgcaagttcg aacccaaccg cttgcaggag caattgggct
     1021 tcctcggctt acaaccggtc gcccactaca ccgatccgca agaatggttt tccgtgctct
     1081 tgttgcgcaa atcagctcag agataaggcc gcacacgcag tacggcgccc cctcggggag
     1141 atcctgaacg gcgataggtc cgcgcggttg gcgcagtgcc gcggcgaaat agccgccatg
     1201 gtacttgccc gcctgagcgt cgaacgcctt gggcaaatcg atccacgaga tcgccgggtt
     1261 gatatgatga atgccgtgca atttaaaatt taacaacaaa cccgctaatg gtccgggcag
     1321 gctcaaattc ttggcaaaaa acacatcgct caccggggtc tcgtagtgat aaacattgtc
     1381 gagaaacgag attaacaagg cgcgcgccgc caacgcacca agcagccacg gccagtgcgg
     1441 accgtatgag taaaatgcca aggccaacca tgccatcgtc aacgccccgt cgcggcgaat
     1501 ctcgcgcagc gattcggcac ccagccagct ctgcattaaa atactgctga ggctttgcgc
     1561 cggcagatag cggtcgcgaa agcgctcgag ccaacgccgc ggcaagaaaa aataaagcgg
     1621 gctgatgact tcgacaaagt acaggccgac aagaatctga aaataatatc ccggcgccgc
     1681 gccggccttg ctgcccttgt cacgatcgaa gtattccgtg ccttcagca
//
LOCUS       DATIRS010000117         1603 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1385921, whole genome shotgun sequence.
ACCESSION   DATIRS010000117 DATIRS010000000
VERSION     DATIRS010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1603
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1385921"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..596
                     /locus_tag="VLM90_01455"
     CDS             <1..596
                     /locus_tag="VLM90_01455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11645.1"
                     /translation="KFLPANHVALALSYIILANHDHVKLHLLQDGTRGSASSFFRGRR
                     RMIDCVNFATSVTPTGAIELAPALSEHLKRLRRPGKAILVSDFLMPALEYEKGLNLLR
                     GFNLDIAAIQVLSRHEVDPPWPNGSLALIDSETRAEVNYRWDPNALRDYQNRLAHHNL
                     QLRSFCHQSAIDYSLYVTDRDLSDFVFATLPAIGLFK"
     gene            601..>1603
                     /locus_tag="VLM90_01460"
     CDS             601..>1603
                     /locus_tag="VLM90_01460"
                     /inference="COORDINATES: protein motif:HMM:TIGR02226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BatA domain-containing protein"
                     /protein_id="HSQ11646.1"
                     /translation="MEFLNPTALFGLFALPLLLIPYLIKHKPRRQIFSSLLLFMSGAE
                     KTSAQPWGRINLPPIFFLQLLLLALLIFALSEPVFSVRPTNIAVILDNSASMQALEDG
                     KTRFALAKERAGEVIGDLDTAGTVDLYLTSPGLAKLRATPLTPTEARSTLGALTAYDL
                     GDPPIDYDSALGQLARERKYERVYLITDHPARGQSATARVISVGAPRDNKAVTAFDLQ
                     RSSLADARLQASVEVANYSNQDEKVRLFLKADGKTLAERQLVVGAGKTATAAFEGFAE
                     HAYYETEIDARDALPLDNRRYAVLPASRELKILAVTPRPQAVTSQRSIPGISVDIIAP
                     "
BASE COUNT          315 a          522 c          432 g          334 t
ORIGIN      
        1 aaaaatttct acctgccaat cacgttgccc ttgcgctctc ctacatcatc ttggccaatc
       61 acgaccacgt caagctgcac ctgttgcaag acggcacgcg cggcagcgcc tcctcgtttt
      121 tccgcgggcg gcggcgcatg atagactgcg tgaactttgc tacttcggtg acgcccacgg
      181 gcgccatcga gcttgcgccc gctttgagtg agcacttgaa gcggctcagg cggccgggca
      241 aagcgatatt ggtatcggat tttttgatgc ccgcgctgga atacgagaag gggctcaatt
      301 tgctgcgcgg gttcaacctc gacatcgccg cgattcaagt tttgtcgcgc cacgaagtcg
      361 accccccttg gccgaacggc agcttggctt tgatcgatag cgaaacccga gctgaggtca
      421 attatcgctg ggaccctaac gcgctccgcg actatcaaaa tcgtctggcc catcacaacc
      481 tgcaactgcg cagcttttgc catcagagcg ccatcgacta ttcgctctat gtcaccgacc
      541 gcgatttaag cgatttcgtc ttcgccacgc taccagcgat cggactgttc aagtaagccc
      601 atggaatttc tcaatcccac ggcgctgttc ggtctgttcg cattgccttt gttgttgatt
      661 ccgtatttga tcaagcacaa gcctcgccgc cagatttttt ccagtctctt gctgttcatg
      721 agcggcgccg agaagactag cgcccagccc tggggacgaa tcaatctgcc gccgatcttt
      781 tttctccagc ttttgctgct cgctctgttg atttttgcgc tcagcgagcc ggtattttca
      841 gtgcgtccca ccaacatcgc cgtcatcctc gacaactcgg cgagcatgca agccctggaa
      901 gacggtaaaa ccagatttgc cctggccaag gaacgagccg gcgaagtcat cggcgacctc
      961 gacactgcgg gcacggttga tctttatctc acctcccccg ggctggcgaa actacgggcg
     1021 acgccgctga cccccacaga agcgagaagc actctcggcg cgctcaccgc ttacgatctc
     1081 ggtgatccac cgatcgatta cgacagcgcg ctcggccaat tggcgcgcga gcgcaaatac
     1141 gagcgcgttt atctaatcac tgaccatccg gcgcgcggcc aaagcgccac cgcgcgggta
     1201 atttccgtcg gcgctccacg ggacaataag gcggtgaccg ccttcgacct ccagcgctcc
     1261 tccctggccg acgcgcgctt gcaggcgagc gtcgaggtcg ccaactattc caaccaggac
     1321 gagaaggtcc gattattttt gaaggccgac ggtaagacat tggccgaacg ccaactcgtg
     1381 gtcggcgcgg gcaagaccgc cacggcagcc ttcgaaggct ttgccgagca cgcttactat
     1441 gagacagaga tcgacgcccg cgacgcgttg ccgctcgata accgccgcta cgccgtcctg
     1501 ccggcgtcgc gcgaactaaa aattctcgcg gtcacgccgc ggccgcaggc ggtgacgagc
     1561 cagcggtcga ttcccggcat cagcgtcgat atcatcgccc ccg
//
LOCUS       DATIRS010000118         1727 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1189287, whole genome shotgun sequence.
ACCESSION   DATIRS010000118 DATIRS010000000
VERSION     DATIRS010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1727
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1189287"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1030)
                     /locus_tag="VLM90_01465"
     CDS             complement(<1..1030)
                     /locus_tag="VLM90_01465"
                     /inference="COORDINATES: protein motif:HMM:NF020896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050485 - oxidoreductase activity, acting
                     on X-H and Y-H to form an X-Y bond, with a disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine/sarcosine/betaine reductase component B
                     subunit"
                     /protein_id="HSQ11647.1"
                     /translation="MRLELAEFPVASIKLADRFDYAAGQLTVDRSAIEQAVVQEGRIE
                     AAWLDVVSPGDRVRITGIRDVVEPRVKVSGSGQVFPGVLGPVQPVGAGRTHRLSGMAV
                     FVTAEYEGMVRAGLGVQRSAILDMWGDGAAASPFSGLNGLVLNLRLAQGLSELAAHTI
                     IQRAALETAKRLAEVTLGLSPAQIEVFELGGADPTLPSVLLIQGCLTDAGNPHSGVGY
                     FGLPIRDSLATTVHPNEFLDGAFTMYATRCLAYFPVTWDWQNHPLLLGLYRAHRRSVN
                     FLGVILERIAFDTFHGKEVIAQNTAQLATLLGADAALLSWIGSGNAFVDVMLTLRACE
                     GRGIKTNLV"
     gene            complement(1133..1378)
                     /locus_tag="VLM90_01470"
     CDS             complement(1133..1378)
                     /locus_tag="VLM90_01470"
                     /inference="COORDINATES: protein motif:HMM:TIGR01918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine/betaine/sarcosine/D-proline family
                     reductase selenoprotein B"
                     /protein_id="HSQ11648.1"
                     /translation="MRLELAEFPVAMISAMYPVAEQVGASRIVKGVSIPHPCGDPSLP
                     AALDAQLRREIVSTALKALEEKVESSTVFTPKIATGA"
BASE COUNT          369 a          559 c          493 g          306 t
ORIGIN      
        1 tcaccaaatt ggtcttgatg ccgcgaccct cgcaggcgcg caaggtcagc atgacatcga
       61 caaaggcgtt gcccgagccg atccaggaca gcagcgccgc gtcggcgccc agaagggtcg
      121 ccaattgcgc ggtattctgg gcgatcactt ctttgccgtg aaaggtgtcg aaggcgatgc
      181 gttcgagaat gacacccaaa aagttgacgc tgcggcggtg cgcgcggtag agcccgagca
      241 gcaacggatg attctgccaa tcccaggtaa ccgggaagta ggccaggcat cgagtggcgt
      301 acatggtgaa ggcgccgtcg agaaactcat tgggatgcac ggtggtcgcc agcgagtcgc
      361 gaatcggcag gccgaaatag ccgacgccgg agtgcggatt gccggcatcg gtcaaacaac
      421 cttgaatcag taagacactt ggcagcgtcg gatcggcgcc gcctaattca aagacttcga
      481 tttgcgccgg actcaatcca agcgtcactt cagccagacg cttggcggtt tctaaagcgg
      541 cgcgctgaat gatcgtatgc gcggcgagct ccgacaaccc ctgcgccagg cgcagattca
      601 gaactaatcc gttgagcccg ctgaaaggcg aagccgccgc gccgtcgccc cacatatcga
      661 gaatcgcgct gcgctgcacg ccgagcccgg cgcgcaccat gccctcgtac tcggcggtga
      721 cgaacacagc catgccggag agccgatgtg tccggcccgc gccgaccggt tgcaccggtc
      781 ccagcacgcc gggaaacact tgccccgagc cgctcacttt gacgcgcggc tcgacgacat
      841 cgcggatgcc ggtaatgcga actctatcgc cgggcgagac gacatcgagc caagccgcct
      901 cgatacgccc ctcctgcaca accgcttgct cgattgccga cctgtcaacg gtcagctgcc
      961 cggcggcgta gtcaaaccga tcggcgagct tgatgctcgc caccggaaac tccgccaact
     1021 caagtcgcat ggctggacca tgttacgaat aattttcccc tcataactac cttggcgtct
     1081 tggcgccttt gcgggagaat ccgaagcaac cgagcacgat cacgacttcc cctcacgcgc
     1141 ctgtcgcgat ctttggcgtg aacaccgtcg acgattcgac cttctcctca agcgccttca
     1201 atgccgtcga gacaatctcg cggcgcaact gcgcgtccag cgcggcgggc aagctcgggt
     1261 cgccgcaggg atgcggtatc gacacgcctt tgacgatgcg gctggcgccc acctgttccg
     1321 ccaccggata catcgcactg atcatcgcca ccggaaactc cgccaactca agacgcatgg
     1381 atatttcctg aacgactact cataacatcc ccctttgaaa agggggactg agggggattt
     1441 gaagtttgcc aacgtaataa aatcccccct tccccccttt attcaaaggg gggataaact
     1501 caacgaactt ataggtcatg atcgtaaccg gatgaacgaa cacgatcacg acttcccctc
     1561 acgcgcctgt cgcaatcttc ggcgtgaaca ccgtcgacga ttcgaccttc gcctcaagtg
     1621 ccttcagtgc cgtcgagacg atctcgcggc gcaactgcgc gtccagcgcg gcgggcaagc
     1681 tcgggtcgcc gcagggatgc ggtatcgaca cgcctttgac gatgcgg
//
LOCUS       DATIRS010000119         1552 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_9292, whole genome shotgun sequence.
ACCESSION   DATIRS010000119 DATIRS010000000
VERSION     DATIRS010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1552
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9292"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(229..>1552)
                     /locus_tag="VLM90_01475"
     CDS             complement(229..>1552)
                     /locus_tag="VLM90_01475"
                     /inference="COORDINATES: protein motif:HMM:NF012892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HSQ11649.1"
                     /translation="DPLRPEVLPAIHACHTAGIRVIMITGDYALTAASIGRQISLGQD
                     SPLKAFTGAEVSEMTDAQLRAILAQGETIFARVAPEHKLRIVAQLKQMGEIVAVTGDG
                     VNDAPALKKADIGIAMGLRGNDVAKEAARMILTDDNFGSIVAAIEEGRAIFDNIKRFA
                     AYVLNSNPQEMYPYIFWVLFPDIPLAMTVMGVLAVDVGTDLVPAMGLGIEPPEEGIME
                     RPPRRRDEKILSLPFILRAYFVHGSILALSCYATYYYMGWVLGAWQVGQSLAAMPASP
                     RGLQFAHATPAYLQTLTAYFFPTVTTQIANVLCKRSAKASLFAANFLQPGYRREALQA
                     IAQWRPRRAPALFEPFAPATAWLAKFFERHYIVFNLLSNPLIDLGILFELLLCYFFFY
                     TPLAEIYYFAPVPWHVYLFACHGTVILLVFEEVKKYYRRKGFPLEFLG"
BASE COUNT          321 a          419 c          498 g          314 t
ORIGIN      
        1 tatttttagg ggcattttcg gcgcggcccg gtggccgcgc tgcaacttgt gggaaggata
       61 ggtcccgtaa ttccctctaa ggcgatttca gtttgattct cgtcgcacca cattgggggt
      121 cgttagagct gccaattttc accaaggcga atcgtccaag cgcgctttgc cgcagtgaaa
      181 acatttttga tcgttacttt gccacatcag catatccgcc gctcggctct agccgagaaa
      241 ttccagagga aagcctttgc ggcgataata ttttttcacc tcttcgaaga ccaatagaat
      301 cacggtgcca tggcaggcga acaggtagac atgccaaggc accggcgcga aataatagat
      361 ctcggcgagc ggcgtgtaga aaaaaaagta gcagagcagc agttcgaaaa gaatgccgag
      421 atcgatgagc gggttggaga gcagattgaa gacgatgtaa tggcgttcga aaaactttgc
      481 cagccaggcg gtggcgggcg cgaaaggctc gaacagcgcc ggtgcccgcc gcggccgcca
      541 ctgggcgatc gcttgcaggg cttctcggcg atagcccggt tggagaaagt ttgccgcgaa
      601 tagcgacgct ttcgctgagc gtttgcacag cacattggcg atctgcgtgg tcacggtggg
      661 gaaaaagtag gcggtcaagg tttgcaaata agccggcgtc gcgtgcgcga attgcaaacc
      721 tcgcggcgaa gcgggcatgg ccgcaagact ctgcccgacc tgccaggcgc cgagcaccca
      781 acccatgtaa tagtaagtcg cgtagcaact gagcgccaat atgctgccgt gcacgaagta
      841 ggcgcgcagg atgaatggca gcgataggat cttttcatcg cgccggcgcg gcggccgctc
      901 catgatgcct tcttcggggg gttcgatgcc gagccccatg gcggggacga gatcggtgcc
      961 gacatcgacg gcgagcacgc ccatcacggt catcgccaga ggaatatccg ggaacagcac
     1021 ccagaaaata tagggataca tttcctgcgg gttgctgttg agcacatagg cggcgaaccg
     1081 tttgatgttg tcgaagatcg cccggccttc ttcgatggcg gcgacaatgg agccgaagtt
     1141 gtcgtcggtc aagatcatgc gcgctgcttc tttggcgacg tcgttgccgc gcagtcccat
     1201 ggcgatgccg atatcggctt tcttgagcgc cggggcgtcg ttgacgccgt cgccggtgac
     1261 ggcgacgatc tcgcccatct gtttcaactg ggcgacaatg cgcagcttat gttcgggtgc
     1321 gacgcgagcg aaaatcgttt cgccttgggc gagaatggcg cgcagttgtg cgtcggtcat
     1381 ttcggaaacc tccgcgcccg tgaatgcctt gagcggcgag tcttgcccca aactgatctg
     1441 ccggccgatg ctggcggcgg tgagggcgta gtctccggtg atcatgatga cgcggatgcc
     1501 ggccgtgtga caggcgtgga tcgccggcag cacttccggc cgcagcggat cg
//
LOCUS       DATIRS010000120         1614 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_500955, whole genome shotgun sequence.
ACCESSION   DATIRS010000120 DATIRS010000000
VERSION     DATIRS010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_500955"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..426
                     /locus_tag="VLM90_01480"
     CDS             <1..426
                     /locus_tag="VLM90_01480"
                     /inference="COORDINATES: protein motif:HMM:NF013488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HSQ11650.1"
                     /translation="MKVNMEREGLAFNAERNMSFNSRLAQELATWAATKGKAEEVANA
                     LFRAYFVDVKNIGKVEVLAQIAEHNDLPKDEATDVLLSRKYKDAVDEDWKRCAAFGVN
                     GVPTFLAGKYLMVGAQPYEELKRLIEHVLKEPAAQSSDG"
     gene            616..1548
                     /locus_tag="VLM90_01485"
     CDS             616..1548
                     /locus_tag="VLM90_01485"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ11651.1"
                     /translation="MANAAVSADGTEKLTRIRMGLAARSTTSMPFFVAKERGFFREEG
                     LDVELIVMQAIQTIQATLGNSTQFASATGSAVSAAVRGADIKVILAVTDRPSFDLIVQ
                     PNITSVQQLRGKKIGTGGVGSLAEILARRILMANNVRPEEVAILATGPSHVTYLSLKA
                     KVIDAAPLQMPLTFTAQDEGFRKLVSAGDVYQTVQGGLATTTAMLTEQPELVTKVVRA
                     MLRATRLFKSDRKYGIEFLTGPWLDIGKDPEKIAARTYDIAAPALLENGIVGEDIQRQ
                     MIADAAAQIKPKQPVLPAQVFDFSISRKVGETLK"
BASE COUNT          383 a          467 c          456 g          308 t
ORIGIN      
        1 atgaaagtaa acatggagcg cgaaggcttg gcgttcaatg ccgaacgcaa tatgtccttc
       61 aacagccggc tcgcccaaga actcgccacc tgggcggcaa ccaaaggcaa agcagaagaa
      121 gtcgccaatg cgctgttccg cgcctacttc gtcgacgtga agaatatcgg caaggttgaa
      181 gtgctggcgc aaatcgccga gcacaacgac ttgccgaaag acgaagccac cgacgtcttg
      241 ctcagccgca aatacaaaga cgccgtcgat gaggattgga aacgatgcgc cgccttcggc
      301 gtcaacggcg tgccgacgtt tctggccggc aaatatttga tggtcggcgc ccaaccctat
      361 gaagagttaa agcggctgat cgagcatgtc ttgaaggagc cggcagctca gagctcggat
      421 ggctagtcgc attgccaagc ttcatctgag aagcgcgccg gggcagcccg gctattgaaa
      481 gaacgcggaa tttgccgatc cgtcgatcgg aggccattgg gctgaaggaa tcgacgtaag
      541 cgaaagaagg acgcgatgac gaagctaaga cgattcgcca ctctttctct agtctccctt
      601 acattcatct gctctatggc caacgcggcc gtttcagccg atggcaccga gaagcttacc
      661 cgcatccgca tgggcttggc cgcgcgcagc acgacttcca tgcccttctt cgtcgccaag
      721 gaacgcggct tcttccgcga agaaggcttg gatgttgagc tgatcgtcat gcaggcgatc
      781 caaaccattc aagcaacgtt ggggaatagc actcaattcg cctcggcaac cggttcggcg
      841 gtcagcgcag ccgtgagagg cgccgacatc aaagtgattt tggcggttac cgatcgcccg
      901 tctttcgatc taatcgtcca gcccaatatc actagtgtgc aacaactgcg cggcaaaaaa
      961 atcggcaccg gcggcgtcgg ttctctggcg gaaatcctcg cgcgccggat tcttatggcg
     1021 aataacgtcc gccccgagga agttgccatt cttgcaacgg gtcccagcca cgttacttat
     1081 ttgtcgctca aagccaaggt cattgacgcc gcgccgctgc aaatgccgtt aacctttacg
     1141 gcccaggacg aaggcttccg caagctggtg tccgccggcg acgtttacca aacggtgcaa
     1201 ggcggtctgg cgacgaccac agccatgctc acggagcaac ccgagttggt gaccaaagtc
     1261 gtgcgcgcca tgttgcgagc gacccggctc ttcaaatccg atcggaagta tggcatcgaa
     1321 ttcctcacag gtccgtggtt ggatattggc aaggacccgg aaaagatcgc agcgcgcacc
     1381 tatgacatcg ccgccccggc actcttggaa aacggtatcg tcggagaaga cattcaacgc
     1441 caaatgattg ccgatgcggc ggcgcaaatt aagcccaagc aaccggtgct gccagcgcaa
     1501 gtgttcgact ttagcatttc ccgcaaggtt ggcgagacat tgaagtagca gagcggatac
     1561 ctcgccggca tcggagaaag agttcgccaa gcgattcggc aacccgctgt tatc
//
LOCUS       DATIRS010000121         2042 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1287807, whole genome shotgun sequence.
ACCESSION   DATIRS010000121 DATIRS010000000
VERSION     DATIRS010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1287807"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..1962)
                     /locus_tag="VLM90_01490"
     CDS             complement(1..1962)
                     /locus_tag="VLM90_01490"
                     /inference="COORDINATES: protein motif:HMM:NF027651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HSQ11652.1"
                     /translation="MISTLGHGSILLAFLVALIGVVMPILGARSGEPRYLTLTRYAIL
                     GQFALVTLAAGALIYGLVATDFSIKYVAFNTTRATPVYYRVTGLWGALEGSLLLWEWI
                     LIIFAGVVAWIYRDRHQEMLPWVLMIFSIVSVFFLGVVAFLSNPFEVISPIPLDGRGL
                     NPLLEDANMMTHPPLLYTGFVGLTVPYAFAMAALIVGKLDEAWITSTRRWTIIAWFFL
                     TAGNLVGAWWSYHVLGWGGYWAWDPVENAAFMPWLPATAFLHSIQVQERRRMLKVWNL
                     SLIIIAFSLTIFGTFLTRSGILSSIHAFSSGPVGGFFLGFLAFILLGSFGLLAYRADL
                     LKEQPELDSMVSRESAFLLNNIVLVSALFTIFLGTIFPLISEAVAGVQVSVGAPYFNS
                     VTVPLFLCLVFLMGVGPMIAWRRASWDNLRRNFLWPAVGSLVFGVALFIWKVNDFLPL
                     LGFTLLVFVVLTMAYDTALALRARKRIAGEGILRGLVTYPRRNQRRYGGLIVHLGVVL
                     IILGIAGSMTYSIEKEATMALKQELQIGNYKIQFEGLKGAQQPTHFRVEGAFRVFHNG
                     SDEGIMTPALKFFPTQQSPIGRAVHQSSLSEDIYLILSGFSEVEQNRATLKALVRPLV
                     IWMWIGGFVIALGTLICIWPMRKIDPVET"
BASE COUNT          503 a          581 c          621 g          337 t
ORIGIN      
        1 tcatgtctca actgggtcta tcttccgcat cggccagatg cagatcaacg ttccgagggc
       61 gatgacgaaa ccgccgatcc acatccaaat caccagcggg cggaccagcg ctttgagcgt
      121 cgctcgattt tgctcgacct cgctgaagcc ggagaggatc aagtagatat cctcgctcaa
      181 gctgctctgg tgcacggcgc ggccgatggg tgactgctgg gtcggaaaaa attttagcgc
      241 tggcgtcata atgccctcgt cgctgccgtt gtgaaacacg cggaaggcgc cttcgacgcg
      301 aaagtgggtc ggctgctgcg cacccttgag cccctcgaat tggatcttgt aattgccgat
      361 ctgcaattcc tgtttgagcg ccatcgtcgc ttctttctcg atgctataag tcatcgagcc
      421 cgcgatgccc aaaatgatca ggaccacgcc gaggtgaacg atcaggccgc cgtagcgccg
      481 ctgattgcgc cgcgggtagg tgacgagacc gcggaggatt ccttcaccgg cgatgcgctt
      541 gcgcgcgcgc agcgcgagcg ctgtatcgta agccattgta agcaccacaa acactaacag
      601 ggtaaaaccc aggagcggca agaagtcgtt gactttccag atgaacaagg caacgccgaa
      661 aacgagcgag ccgaccgccg gccagagaaa gtttcgcctg aggttgtccc acgacgcgcg
      721 ccgccaagcg atcatcgggc ccacgcccat aagaaaaacg agacacagaa acagcggcac
      781 ggtgacggaa ttaaaatagg gcgcgccgac gctgacttga acaccagcga ccgcttccga
      841 gatcaatggg aaaatcgtgc cgagaaagat cgtaaacagc gccgacacca ggacgatgtt
      901 gttcagcaaa aacgccgact cgcggctcac catggagtcg agctcgggct gctccttgag
      961 cagatcggcg cgataagcga gcaggccgaa ggagccgagc aaaatgaaag cgaggaagcc
     1021 gaggaaaaag ccgcccaccg gcccggacga aaacgcatgg atcgatgata gaattcccga
     1081 gcgggtgaga aaagtgccga agatggtcag gctgaaggcg atgatgatca gcgacaggtt
     1141 ccaaactttc agcatccgtc tccgctcctg tacttggatc gaatgcaaga atgccgtcgc
     1201 cggcagccaa ggcatgaacg cggcgttttc caccgggtcc caggcccaat agccgcccca
     1261 accgagcacg tgatacgacc accaggcgcc gacgagattg cccgccgtta gaaaaaacca
     1321 cgcgataatc gtccagcgcc gcgtgctggt gatccaggct tcgtcgagct tgccgacgat
     1381 taacgccgcc atggcgaagg cgtaaggcac ggtgagtcca acgaagccgg tatagagcag
     1441 cggcggatgg gtcatcatat tggcgtcttc gagcagcggg ttgaggccac ggccgtcgag
     1501 cggtatcggc gagattactt cgaagggatt ggacagaaag gcgacgacac cgagaaagaa
     1561 caccgacacg atggaaaaga tcatcaacac ccagggcaac atttcctggt ggcggtcgcg
     1621 gtagatccaa gcgacgacgc cggcgaagat gattagaatc cactcccaga gcagcagcga
     1681 tccttccaga gcaccccaca gaccggtgac gcggtaatag accggcgtcg cccgggtggt
     1741 attgaaggcg acgtacttga tcgagaaatc agtagcgacc aaaccgtaaa tcagcgctcc
     1801 tgcggccaac gtgacgaggg caaactggcc gagaatggcg tagcgggtga gggttagata
     1861 acgcggttcg ccgctgcgcg cccctaggat cggcattacg accccgataa gcgccacgag
     1921 aaaagccagc aggatggagc catgccccag ggtcgagatc acttggcgta ggcttccttg
     1981 gcgggaacga agctttttgt cggcggctgg ccgtccggat gggggctata atcttcggca
     2041 tg
//
LOCUS       DATIRS010000122         1551 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_206301, whole genome shotgun sequence.
ACCESSION   DATIRS010000122 DATIRS010000000
VERSION     DATIRS010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1551
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_206301"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1551)
                     /gene="alaS"
                     /locus_tag="VLM90_01495"
     CDS             complement(<1..>1551)
                     /gene="alaS"
                     /locus_tag="VLM90_01495"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HSQ11653.1"
                     /translation="YFAKQGHTVVRSSSLVPDKDPTLLFTNAGMVQFKNVFLGQQRLP
                     YVRAASAQKCLRISGKHNDLEVVGRDTYHHTLFEMLGNWSFGDYYKAEAIEWAWELLT
                     REWGLPKDKLYATVYLNDDDAEQLWFKISGLPRERVSRFGDKENFWEMGETGPCGPCS
                     EIHLDRGPAACDRQGAAGHECRVNGDCARYIELWNLVFIQYNRAEDRSLSELPAKHVD
                     TGMGMERITAVLQNVLSNYDIDIMRELTATTERLTGKKYGADPTADISYRVIDDHARA
                     VSCLIADGVTPSNEGRGYVLRRLLRRAARHGRLIGLTEPFLHEVAKTVAAVMGDAYPE
                     LKQEERRIREVIRSEEERFGETLDRGLVLLEDATAKLKAEKQRTLSGEIAFRLYDTYG
                     FPLDLTEDILRADDIDVDQQSFTELMEAQRSRGREARESVSMESKIQLDGQVCFTGYD
                     RLDDESSVIGIFGNAGSKREAVEGEEIELVNAETPFYGESGGQVGDRGVISTARGDLV
                     EIVDTQHPT"
BASE COUNT          276 a          449 c          476 g          350 t
ORIGIN      
        1 tgtcggatgt tgggtatcga cgatttccac caaatcgccg cgcgcggtgc ttatgacccc
       61 acggtcgccg acctgcccgc cggattcgcc gtagaaaggg gtttcagcgt tgactagctc
      121 gatctcctcg ccttccaccg cttcgcgctt gctgccggcg ttgccaaaga tgccaatgac
      181 cgacgattcg tcgtcgagtc ggtcgtaacc ggtaaaacaa acctggccgt cgagttggat
      241 cttcgattcc atgctgacgg attcgcgcgc ctcgcggccg cggctccgtt gcgcttccat
      301 gagttcagtg aaactctgct ggtcgacgtc gatatcgtcg gcgcgcagta tgtcctcggt
      361 gaggtcgagg ggaaagccgt aggtgtcgta gaggcgaaag gcgatttcgc cggacagagt
      421 tcgttgtttt tccgctttga gtttcgcggt ggcgtcttcc aggagaacca ggccgcggtc
      481 gagggtttcg ccgaagcgtt cttcttcgct gcgaatcact tcgcggatgc gccgctcttc
      541 ttgtttcaat tccggatagg cgtcgcccat gaccgcggca acggtcttgg cgacctcatg
      601 gaggaaaggt tccgtcaaac cgatcaagcg gccatggcgg gcggcgcggc gcaacagccg
      661 gcgcaggaca tagccgcgcc cttcgttgct cggcgtgacg ccgtcggcga tcagacagct
      721 gacggcgcgg gcgtgatcgt cgatgacgcg ataggagata tccgccgtcg gatcggcgcc
      781 gtatttcttg ccggtgagtc tttcggtggt ggcggtgagc tcgcgcatga tatcgatatc
      841 gtaattcgac aagacgtttt gcaataccgc ggtgatgcgt tccatgccca tcccggtgtc
      901 gacatgcttg gccggcaatt ccgagaggct gcgatcctcg gcgcggttgt actgaataaa
      961 aaccaaattc cacagctcga tgtaacgggc gcaatcgccg ttgacgcggc attcgtggcc
     1021 ggcggcgcct tgcctgtcgc aggccgccgg gccacggtcg agatggattt cgctgcacgg
     1081 gccgcagggg ccggtctcgc ccatttccca aaaattttct ttatcgccga agcggcttac
     1141 ccgctcccgc ggcagaccgc tgattttgaa ccagagctgc tccgcgtcat cgtcgttcaa
     1201 atagacggtg gcgtaaagct tgtctttggg cagaccccat tccctggtta gcagctccca
     1261 ggcccactcg atggcttcgg ctttgtagta atcgccgaaa gaccagttgc cgagcatctc
     1321 gaatagcgtg tgatggtagg tatcgcggcc gaccacttcc aagtcgttat gcttgccgct
     1381 gatgcgcagg catttttgcg cgctggcggc gcgcacatag ggcaaacgct gctggcctag
     1441 gaaaacgttt ttgaactgca ccatgccggc gttggtaaac agcaatgtcg gatctttgtc
     1501 gggcactaat gaagagctgc gcaccacggt gtgaccctgt ttagcgaagt a
//
LOCUS       DATIRS010000123         1606 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1582810, whole genome shotgun sequence.
ACCESSION   DATIRS010000123 DATIRS010000000
VERSION     DATIRS010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1606
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1582810"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(78..701)
                     /locus_tag="VLM90_01500"
     CDS             complement(78..701)
                     /locus_tag="VLM90_01500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11654.1"
                     /translation="MSKHQRIVSNVLFFFVVFLTIQACDKKEEAKTTAPAATPAPAAQ
                     APQPVSPPTPASAPAPEVAPSAAPAPQPAPAKAALATSDGETPGARVEVQELKRVSGG
                     TVMLRFTMINDADKTLNVGYDFGAGSTSDIGTVAGVHLIEPVGKKKYLVVRDSESKCD
                     CSRGVKDIAAKSRVNLWARFPAPPDNVEKIGVVIPHFAPMDDAPLSR"
     gene            890..>1606
                     /locus_tag="VLM90_01505"
     CDS             890..>1606
                     /locus_tag="VLM90_01505"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ11655.1"
                     /translation="MARNGIPVVDGDGHVMEDWDALLQYMPEPYIKSGRFKGRIFPPL
                     DHLHSATLYQLVPGAFKPVREDGWLEFMEDVGIERAVLYSTGGLAFGKVITREFAVDV
                     ARAWNNWFADTYLKKSPRFQGLALVPLQEPDEAIKEMRRAVTELKFCGVMLPSTGFKG
                     HLGDKEYWPFYAAANQLGCCIGVHGGAHEGLGMDWLTPYAPINGLGHAVGQMVAFAGI
                     IFNGIFDKYPNLRIGFMEAGV"
BASE COUNT          326 a          447 c          485 g          348 t
ORIGIN      
        1 ccacccgctc tgggaaagta tgccgaccat gatcaatcca acgtacaccg gtagtaaaat
       61 catcatggtc ctcttcgtca acggctgaga ggcgcatcgt ccatcggcgc gaagtgaggt
      121 atcacgacac cgatcttctc gacgttatca ggcggcgcgg gaaacctcgc ccagaggttg
      181 acgcgcgatt tggcagcaat gtctttgacg cctctactgc agtcgcactt gctttcgctg
      241 tcacggacga ccaggtattt cttcttgccg acgggctcga tgagatgcac gccggctacg
      301 gtaccgatat cgctagttga acctgcgcca aaatcatagc cgacgttaag agtcttatct
      361 gcgtcattga tcattgtgaa cctgagcatc acggtcccgc cgctgacacg cttgagttcc
      421 tgaacctcga cgcgcgctcc aggggtctcg ccgtcggagg tcgcgagcgc ggctttcgcc
      481 ggtgcgggct gaggcgcggg cgcggccgat ggcgcaactt caggagctgg cgccgatgca
      541 ggagtgggcg gcgaaacagg ttgcggcgct tgagctgcgg gtgctggagt agccgcagga
      601 gcggttgttt tagcttcttc tttcttgtcg cacgcctgaa ttgttagaaa cacgacaaag
      661 aagaatagga cattactgac gatgcgctga tgcttggaca tgggctgttt ctcctcttcc
      721 acagcggtat gggtgaaggg caactatatt gcggaagctc gactcggaag ctcgcgcaag
      781 atacgctttt cgccgttctc cagtcaagtc actgcaatag ccattgattg cagtagtgat
      841 cctgcgatac agaaaggtag attctccata aacaaaagga ggcttagtta tggcacgcaa
      901 tggaatcccc gtggtcgatg gcgacggtca tgtgatggaa gactgggacg cgctcctgca
      961 gtatatgccg gagccgtaca tcaagagcgg ccgcttcaag ggacggattt ttccgccgct
     1021 ggatcacctg cattccgcga cgctctatca attggtcccc ggcgcgttca agccggtgcg
     1081 cgaagacggc tggctggagt tcatggaaga tgtcggcatc gagcgtgccg tgctttacag
     1141 caccggcggc ttggccttcg gcaaagtgat cacccgcgaa tttgccgtcg atgtcgcgcg
     1201 cgcgtggaac aactggtttg ccgataccta tctaaaaaag agtccgcgct ttcaggggct
     1261 ggccttggtg ccgctgcagg agccggatga agcgatcaag gaaatgcgcc gcgccgtgac
     1321 cgagctcaaa ttctgcggcg tcatgctgcc gtccacaggt ttcaaagggc accttggcga
     1381 caaagaatat tggccgttct acgccgctgc caaccaactg ggctgctgca tcggcgttca
     1441 tggcggcgcc catgagggac tcggcatgga ttggctgacg ccctacgcgc cgatcaacgg
     1501 cttgggccac gcggtgggcc aaatggtcgc cttcgccggc atcattttca acggtatctt
     1561 cgacaagtat cccaatctgc gcatcggctt catggaggcc ggggtg
//
LOCUS       DATIRS010000124         3189 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_206379, whole genome shotgun sequence.
ACCESSION   DATIRS010000124 DATIRS010000000
VERSION     DATIRS010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3189
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_206379"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..338
                     /locus_tag="VLM90_01510"
     CDS             <1..338
                     /locus_tag="VLM90_01510"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HSQ11656.1"
                     /translation="AQHVIDKAKEIEVRTASGQRLAARLVVADSQLDLALLKIQSERD
                     ATALALGDSDRIQVGDLAVVFSYPFGRESSMSLGIISRAGKTYPDSAAYDFIQTDAGA
                     YPGVSGGPL"
     gene            372..782
                     /locus_tag="VLM90_01515"
     CDS             372..782
                     /locus_tag="VLM90_01515"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HSQ11657.1"
                     /translation="MASERGNLGFATPINVIKKILPRLVRGEKFAWGWLGVQMSDISL
                     SQARSQGIYPAKGVVVSSVLPGQPAARVGVQKQDVILAVNDIVVDSPRDVARMVGGLE
                     AGRLVQLSIMRKGKALHLTVPLGVKPESPKPREG"
     gene            complement(790..>3189)
                     /locus_tag="VLM90_01520"
     CDS             complement(790..>3189)
                     /locus_tag="VLM90_01520"
                     /inference="COORDINATES: protein motif:HMM:NF025038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSQ11658.1"
                     /translation="DLSFLPFTCTADMTPLEDFIGQDRAIRAIEFGLGVNKPGFNIFV
                     TGLTGTGKTSIIKAFLKKVTSVTAAPADAPMPEDWCYVYNFSDPDRPQALKIRRGFGK
                     ALKNDMEQLIQNLQREAKKLFESDDFAHQRQALIEQLQKKQQEMMEGLMEQANRAGFA
                     LRMTPSGIMLLPTKDGKPMQEADYLALPAAEKKQLEERRSEIEKQVEDTLRDGKKLER
                     EIAARLETVETEAADYLVRNPMTELKEKYRDYPRVMAYLDGVREHILKNLQRFKGEAA
                     SPAGPMAGLSFGEPPGDPFLPYRVNVFVDNSDTQGPPIIVETNPTYHNLFGVIEKKPI
                     MGGYTTDFTLIKAGSISKANGGFLVLYDREVLANAGCWEALQRVIKNRELRIEEPGTF
                     FGFVPPQGLRPEPIPTDTKVIMIGDPSLYRALATVDPDFRETFKVKADFNFEVDRTQE
                     NLTAFACFISDYCKREGIRHFDTDGVARVIEQCARQVEDQHKLSTRFSDMVDLLIESD
                     YWAGKENAELISGKHVERALVEKTFRLNLIEKRLQELVAEGTLLVDVAGAAVGQVNGL
                     AVYQMGDFSFGKPSRITTKTFMGRGGLVNIERESKMSGKTHDKGVLILGGYLGGKYAQ
                     QSPLSLSSTICFEQSYDGVDGDSASSTELYAILSSLAEVPIKQGIAVTGSVNQNGEVQ
                     AIGGVNFKIEGHFDICRLKGLTGEQGVMIPQANVRNLMLRADVVEAVKTGKFHIYSVR
                     TIDEGIEVLTGVAAGALQADGKYPEGTINALVQKKLQQFTELQKKLTAAEQKPAESNN
                     D"
BASE COUNT          619 a          941 c          904 g          725 t
ORIGIN      
        1 ccgcccaaca tgtcatcgac aaagccaaag agatcgaagt ccgcaccgcc tccggccaac
       61 gtttggcggc gcgcttggta gtcgctgaca gtcagctcga tttggcgctt ttgaagatcc
      121 aaagcgagcg ggatgcgacg gcgctcgcgc tcggcgattc cgaccgcatt caagtcggcg
      181 acttggcggt ggtgttcagt tacccgtttg gccgtgagag ttcgatgagc ctgggcatca
      241 tcagccgcgc cggcaaaacc taccccgact cggcggccta cgatttcatc cagaccgatg
      301 ccggcgccta ccccggcgtc agcggcggtc cgctgtgaaa tagccagggt catgtcgtcg
      361 gcatgatcac catggcttct gaacggggca atcttggttt cgccacgccg attaacgtca
      421 ttaaaaaaat cctgccgcgc ttggtccgag gcgaaaaatt tgcgtggggc tggctcggcg
      481 tccagatgtc agacatttct ttatcccaag caaggtccca gggaatctat cccgccaaag
      541 gcgtggtggt aagttcggtt ttaccgggac aacccgcggc gcgcgtgggc gtgcaaaaac
      601 aagatgtcat ccttgcggtc aacgatatcg tggtcgacag cccgcgcgat gtggcgcgca
      661 tggtcggcgg cctggaagct gggcgcttgg ttcagctgtc gatcatgcgc aaaggcaagg
      721 cgcttcatct gaccgtgcca ctcggcgtca aacccgaatc gcccaagccg cgcgagggat
      781 agcccaactt caatcgttat tcgactccgc gggtttttgt tctgccgcgg tcagtttctt
      841 ctgtagctcg gtgaactgtt gcagtttctt ttgcaccagg gcgttgatcg taccctcagg
      901 atacttgccg tccgcttgaa gcgcgccggc ggcgacaccg gtgagcactt cgatgccctc
      961 gtcgatggta cgcaccgaat aaatatgaaa cttcccggtt ttgaccgctt cgacgacatc
     1021 ggcacggagc attaaattgc gcacgttagc ctgcggaatc atcacgcctt gttcgccggt
     1081 cagtcctttc aagcggcaga tatcgaagtg gccttcgatt ttgaaattaa cgccgccgat
     1141 cgcctgcacc tcgccgtttt gattgaccga gccggtgacc gcaatgccct gcttgatcgg
     1201 cacctcggca aggctcgaaa gaatcgcgta gagttcggtg gacgatgcgc tgtcgccgtc
     1261 gacgccgtca taggactgct cgaaacagat cgtgcttgag agcgacagcg gactttgctg
     1321 ggcgtatttg ccgcccaagt agccgccgag aatcagcacg cccttgtcat gggtcttgcc
     1381 gctcatcttc gactcgcgct cgatgttgac cagaccgccg cgccccatga aggtcttggt
     1441 tgtaatgcgc gagggcttgc cgaaactaaa atcgcccatc tgataaaccg ccaggccgtt
     1501 cacttgaccg accgccgctc cggcaacatc caccagcaag gtgccctcgg cgaccagctc
     1561 ttgcagccgc ttctcgatca gattcaggcg aaaggtcttt tccaccagcg cgcgctcgac
     1621 atgcttgccg gagatcaatt cggcgttttc cttgccggcc cagtagtccg attcgatcaa
     1681 cagatcgacc atgtcgctga agcgcgtcga cagtttatgc tggtcctcca cctggcgcgc
     1741 gcactgctcg atcacccggg caacgccgtc ggtgtcgaaa tggcggatcc cctcccgttt
     1801 acaatagtcg ctgatgaaac aagcgaacgc cgtaaggttt tcttgcgtgc ggtccacttc
     1861 aaagttgaag tcggctttga ccttgaaggt ttcacgaaag tcgggatcga cggttgccag
     1921 tgcgcgatag agagacggat cgccgatcat aatcactttg gtatcggtgg gaatcggttc
     1981 cggccgcagc ccttgaggcg gcacgaagcc aaagaaggtg ccgggctctt cgatgcgcaa
     2041 ttcgcgattc ttgatgaccc gttggagcgc ttcccagcag ccggcattgg cgagcacttc
     2101 ccgatcgtaa agcaccagga agccgccgtt ggctttgctg atggagcccg ctttgatcag
     2161 cgtaaagtca gtggtgtaac cgcccatgat cggttttttt tcgatcactc cgaacagatt
     2221 gtgataagtc gggttggttt cgacgatgat cggcggcccc tgcgtgtcgc tgttatcgac
     2281 aaaaacgttg acgcggtagg gcagaaacgg atcccccggc ggttcgccga acgataaccc
     2341 ggccatcggt ccggctggcg acgccgcctc gcctttgaag cgctgcaagt tttttagaat
     2401 atgctcgcgc acgccgtcca ggtaagccat caccctggga tagtcccgat acttctcttt
     2461 gagctcggtc attgggttgc gcaccaaata atcagcggct tcggtctcga cggtctctaa
     2521 cctggcggcg atctcgcgct cgagtttctt gccgtcgcgc aaagtatctt cgacctgctt
     2581 ctcgatctcg ctacgccgct cttccaactg ttttttctcg gcggcaggca gcgccagata
     2641 atccgcctct tgcatcggtt tgccgtcttt ggtcggcagc aacatgatgc ccgagggcgt
     2701 catgcgcaac gcgaagccgg cgcggttggc ctgttccatc aggccttcca tcatctcctg
     2761 ctgttttttt tgcagctgtt cgatgagcgc ctggcgctga tgcgcgaaat cgtcgctctc
     2821 gaatagtttt ttcgcctcgc gctggagatt ctgaatcaat tgctccatgt cgttcttgag
     2881 cgctttgccg aagccgcggc gaatcttcaa ggcttggggc cggtcgggat cgctaaagtt
     2941 ataaacatag caccagtcct cgggcatagg cgcgtcggcc ggcgccgcgg ttacactggt
     3001 aacctttttg agaaacgctt tgataatgct ggttttgccc gtgcccgtaa gaccggtgac
     3061 aaaaatgttg aagcccggct tgttgacgcc aagaccgaac tcgatcgccc gaatcgcgcg
     3121 atcctggccg atgaaatcct ccagcggcgt catgtcggcc gtacaggtaa aaggcaaaaa
     3181 cgataaatc
//
LOCUS       DATIRS010000125         1709 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_9944, whole genome shotgun sequence.
ACCESSION   DATIRS010000125 DATIRS010000000
VERSION     DATIRS010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1709)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1709)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1709
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9944"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            179..727
                     /locus_tag="VLM90_01525"
     CDS             179..727
                     /locus_tag="VLM90_01525"
                     /inference="COORDINATES: protein motif:HMM:NF024822.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4112 domain-containing protein"
                     /protein_id="HSQ11659.1"
                     /translation="MEKPRTGNYHRATADPIYEPNVSAKSASDLAAQRLRIARYLAEL
                     LDRRFTIPGTSIRIGLDPILGLVPGVGDLLANLTGSAILFIAAQFNIPKIVLLRMGLN
                     IAINAMIGAIPIFGDIFSIWFRSNVKNVQLLERYAGAPRRASTAADWSFVIALIAALL
                     IIIFAILAGVVWLVSRLANFIN"
     gene            737..>1709
                     /locus_tag="VLM90_01530"
     CDS             737..>1709
                     /locus_tag="VLM90_01530"
                     /inference="COORDINATES: protein motif:HMM:NF026066.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HSQ11660.1"
                     /translation="MPDRFYVATQLRAIGQLLALQGDNPFKAQAYERGAHALENLAED
                     FDTLVRAQLLTAISGVGAALAAVIEEVYQTGESYLLQQLREQLPPGAVELSRVPGLSL
                     KKIAALHDRLAIESVDALKTACQEGLVRNVKGFGKKSEAKLLVDIEKLAQPSDRFLLH
                     HALGATEQLLAHLRAAPELIAAAAAGGLRRRRETVRQLVIVAGTDQPKAIMDRFLRFP
                     AMLTTLELTERECLAQLADGMKAQLIIAEPQSYIATLHRCTGSRAHLHRLAQLAARTE
                     NTVADEPDAGNPREIAADAEPGETAIYRRLGLPYIAPELRENDGEVEA"
BASE COUNT          364 a          507 c          504 g          334 t
ORIGIN      
        1 aatcgatcag gtggaacagt cgtagcgcta agttgaggca tctcaatcgc ccctagaagt
       61 gagaaacttg ctaggagctg ctgcgaagta aggaagaacg cgcaggccgg cagctatcaa
      121 ctatatggtc gccgcgctca atgacgcatc acaagcggtg cgaggaggaa tacccgacat
      181 ggaaaaaccg cgaacaggaa attaccacag agcaactgct gatccgatat acgagcccaa
      241 cgttagtgcc aagagcgcaa gcgacctagc cgcgcagcgg ctgcggatcg cccgctacct
      301 ggccgagctg ctggatcggc gatttaccat tcccggcacg tcgatccgca tcggattgga
      361 cccgattctc ggcctggtgc ccggggtcgg cgacttgttg gccaatctga ccggttcggc
      421 gattctgttt atcgccgcgc aattcaacat acccaagatc gtcttgttgc gcatggggct
      481 gaacatcgcg atcaacgcca tgatcggcgc gattccgatc ttcggcgata ttttttcgat
      541 ctggtttcgc agcaacgtca aaaacgtcca gctcttggaa cgctacgccg gcgctccacg
      601 gcgcgcctcg acagcagccg actggtcgtt tgtcatcgca ctgattgccg cactgctgat
      661 cattattttt gccattctgg cgggagtggt ttggctagtg agcaggctcg ccaacttcat
      721 caactgatgc cgatttatgc cggatcgttt ttacgtcgct actcagttgc gcgccatcgg
      781 ccagctcttg gccttgcaag gcgataaccc gtttaaggcc caggcttacg agcgcggcgc
      841 ccacgcattg gaaaatctcg ccgaggattt cgacacatta gtgcgcgccc aactgctaac
      901 ggcgatctcc ggcgtcggtg cagcgctcgc tgccgtcatc gaagaagttt accagaccgg
      961 tgagagttac ctgttgcagc aattgcgcga gcagttgcca cccggcgccg tggaactcag
     1021 ccgggtgccg ggattgagcc tgaaaaaaat cgctgcactc catgaccggc tcgcgatcga
     1081 gagcgtcgac gctttgaaaa ccgcctgcca ggaggggttg gtgcgaaacg tcaaaggttt
     1141 cggcaaaaaa tccgaggcca aactgctcgt cgatattgaa aagctggcgc agccgagtga
     1201 tcggtttttg ctgcatcatg cgctgggcgc aacggaacag ttgttggcgc acctgcgcgc
     1261 ggcgcccgag ttgatcgccg cggccgccgc cggcgggctg cgtcggcgcc gggaaaccgt
     1321 gcgccaattg gtaatcgttg ccggcaccga tcaacccaag gcgattatgg accgcttttt
     1381 gcgctttccg gcgatgctca caaccctcga attgaccgag cgagaatgcc tagcgcaatt
     1441 ggctgacggc atgaaagcgc aactgattat tgccgagccg caaagctata tcgccacgct
     1501 gcatcgctgc accggttcgc gcgcgcatct gcaccgcctg gcgcaattgg cggcgcggac
     1561 cgaaaatacc gtcgccgatg agccggacgc cgggaatccg cgcgaaatcg cagcggatgc
     1621 cgagcccggt gagacagcca tctatcgtcg actcggatta ccctacatcg cgccggagct
     1681 gcgcgaaaac gacggcgaag tcgaagcgg
//
LOCUS       DATIRS010000126         2030 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1878071, whole genome shotgun sequence.
ACCESSION   DATIRS010000126 DATIRS010000000
VERSION     DATIRS010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1878071"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..201)
                     /locus_tag="VLM90_01535"
     CDS             complement(<1..201)
                     /locus_tag="VLM90_01535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11661.1"
                     /translation="MALFLANEDVQQLLTMGDYIDAVEKAYHELGMGRAWNNPRIHTY
                     GQAQSGATHFLKVFTGTVPALGY"
     gene            complement(255..1148)
                     /locus_tag="VLM90_01540"
     CDS             complement(255..1148)
                     /locus_tag="VLM90_01540"
                     /inference="COORDINATES: protein motif:HMM:NF014476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11662.1"
                     /translation="MKSDIVYEKEYNGVVTQEKYCMRPGLYCGLILLTSVENAEPLAF
                     VNDGHLQHMRVGADGGIGVKYLANQDAEVVGMLGAGGMARTHMEAFTHVRKIDKLQVV
                     SPTRESRERFGREMAEKYNIEVKVCSRPEEVYKGAHILAALTDSAVEVTDGSLLEKGT
                     HIVVVGGTGKPDAESLKRVDVYLRFGDTPAPTGHPELATDAEHVGYEARPQQNKYGDG
                     RRDRRKHGNTLPDRRVTLAALVTGKAKGRSSADQITYSERGNLQGAQFHAVAGKVYEL
                     AKGAGLGRVIPTEWFLQDIRD"
     gene            complement(1182..1361)
                     /locus_tag="VLM90_01545"
     CDS             complement(1182..1361)
                     /locus_tag="VLM90_01545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11663.1"
                     /translation="MTLIINNQEVAQLLTMEDTLAALERSYLQLAAQEVVCRPRIDIR
                     IPTSDPARNYQWGTM"
     gene            complement(1500..1919)
                     /locus_tag="VLM90_01550"
     CDS             complement(1500..1919)
                     /locus_tag="VLM90_01550"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HSQ11664.1"
                     /translation="MATLFTGGCLCGRVRYECSAEPIFMGNCHCRDCQKASGGAYEPD
                     IGLPAAALKITGAVKYYDGKADSGNTLSRGFCPECGASLFGKTSAMPDLAMITAGSLD
                     DPSLYKPTLDIFTSSAQPWDHMDPALAKFPKMPPIAG"
BASE COUNT          362 a          617 c          592 g          459 t
ORIGIN      
        1 atagcccagg gccggtacgg tgccggtgaa aaccttgaga aaatgggttg cgccgctttg
       61 cgcctgtccg taggtatgga tgcgcggatt gttccacgct cgtcccatgc cgagttcgtg
      121 ataggctttc tccacggcgt cgatgtaatc gcccatggtt aaaagctgct ggacgtcttc
      181 gtttgcgaga aatagcgcca tcgtcgattt cccttcgcgg tcaagttgag gaactggaac
      241 tttaggcaca gctgtcaatc gcgaatgtcc tgcagaaacc attcggtcgg aatcacacgg
      301 ccgaggccgg ctcccttggc gagttcgtag accttgcccg ccaccgcgtg aaactgggcg
      361 ccctgcagat tgccgcgctc ggagtaagta atctgatccg ccgagctgcg ccctttcgcc
      421 ttgccggtaa ccagggcggc aagcgtcacg cgccggtccg gcagggtgtt gccgtgcttg
      481 cgccgatcgc ggcggccatc gccatattta ttttgctgcg ggcgcgcctc atagccgaca
      541 tgctcggcgt cggtggcgag ctcgggatgg ccggtgggcg ccggggtgtc accgaagcgc
      601 aggtaaacgt cgaccctttt caggctctcg gcatccggtt tgccggtgcc gccgaccacg
      661 acgatgtggg tgcctttctc gagcagtgag ccgtcggtca cttcgaccgc ggagtcggtg
      721 agcgcggcca ggatgtgcgc gcccttgtag acctcttccg ggcggctgca gacctttacc
      781 tcgatattat atttctccgc catctcgcgg ccgaagcgct cgcggctttc tcgcgtcggg
      841 ctgaccacct gcagcttgtc gattttgcgc acgtgcgtga acgcctccat atgcgtgcgc
      901 gccatgccgc cggcgccgag catgccgacc acctccgcgt cttggttcgc caggtacttc
      961 acaccgatgc cgccgtcggc gccgacccgc atatgctgca ggtggccgtc gttgacgaac
     1021 gccagcggct cggcgttctc gaccgaagtc agcaggatca ggccgcagta aaggccgggc
     1081 cgcatgcagt atttttcctg ggtgacgacg ccgttgtact ccttttcata aacgatgtcg
     1141 gacttcatgc ggatcgcgaa gtagccggcg gtcgatcctc cctacatcgt gccccactgg
     1201 tagtttcgcg ccgggtcgct ggttggaata cggatgtcga tgcgcggccg gcacaccact
     1261 tcctgggcgg cgagctgcaa ataagatcgt tccagcgccg caagggtgtc ctccatggtg
     1321 aggagctgtg ccacttcttg gttattgatg atcagtgtca ttggcgtcct tccctctcat
     1381 ccttcctact cttagcgccg cacacgcctt aaattcgcgc taatcaaagt tccgagtttc
     1441 gctccgttaa acgatttgaa cggagcaaag cggttgaacc acttgaacga tttgaactcc
     1501 tatcctgcga tcggcggcat cttgggaaat ttggccagcg ccggatccat gtgatcccaa
     1561 ggttgcgcgc tgcttgtgaa gatatccaag gtcggcttat acaggctcgg gtcatcgagg
     1621 cttcccgccg tgatcatcgc gagatccggc atggcgctgg ttttgccgaa caaactagcg
     1681 ccgcactccg ggcaaaaacc gcggctcaag gtattgccgc tgtccgcttt gccgtcgtaa
     1741 tacttaaccg cgcccgtgat ctttagcgcc gcggccggca gtccgatgtc gggttcatac
     1801 gcaccgccgc tggccttttg gcaatcgcgg cagtggcaat tgcccatgaa aatcggctcg
     1861 gcggaacatt cgtagcgcac ccgaccgcaa aggcagcccc cggtaaatag agtagccata
     1921 gttattactc cttccttgtc ggtgaattct taacatcact actatcgcca atagttcgag
     1981 aaatcgatat ttgcacgacc ggacgaaact ctcgttactg agccgatttg
//
LOCUS       DATIRS010000127         3446 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1484982, whole genome shotgun sequence.
ACCESSION   DATIRS010000127 DATIRS010000000
VERSION     DATIRS010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3446)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3446)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3446
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1484982"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(253..1110)
                     /locus_tag="VLM90_01555"
     CDS             complement(253..1110)
                     /locus_tag="VLM90_01555"
                     /inference="COORDINATES: protein motif:HMM:NF025091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/PEP mutase family protein"
                     /protein_id="HSQ11665.1"
                     /translation="MTANEKRKALKAMMQQPTCHLAPSCNDGIQARLVEWLGFPLVHI
                     SGSGQHRSLGFADAGLLTLTEMINKAREIVDAVNLPIVSDAETGYGNAVNVYRSVKEF
                     DRAGVAAIHIEDQMTPKRAGHEGFDVGLISRQEFVAKIKAAVDARTDQDLVIIARSEA
                     KDSLQERLERTQACIEAGADASWVSARTEEEILAYAKLGKPLVGVPPRGVMTVQRYGE
                     LGGRVGCIPTVLQVAMLHGMRQCLEELKKNGTEAAYFKNTPGIEDTRKWYANMGNAEL
                     KEMEKKYGY"
     gene            complement(1150..1833)
                     /locus_tag="VLM90_01560"
     CDS             complement(1150..1833)
                     /locus_tag="VLM90_01560"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HSQ11666.1"
                     /translation="MALKHGELRQAVIESANFLVRIGAISMSHHGNFSVRVPGTDTIL
                     LTASSSFDNLKPENLALLDLDGKLVEGEINPTNAEIVHMHAIVYKERPDTGAVVHTHS
                     TYATSFALASRALGCSYEALVRNEMAEGVPLAKYGPRGSGESIANIATALSQTKNTKA
                     VLLENHGVLAFGATPAAAARANLIVEEAAQMAIYAEVLGGAKIIPPELLKATVGRRDE
                     FARAGVQKA"
     gene            complement(1903..2580)
                     /locus_tag="VLM90_01565"
     CDS             complement(1903..2580)
                     /locus_tag="VLM90_01565"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HSQ11667.1"
                     /translation="MDTDELKQNIVTASHILHQQGIAAAFGHVSARISGTNTFICPPR
                     MSPALVREDNLLLLDVEGNQLEGDGRPNTEFWIHARIYKARPDVQSVCHVHPPNCVVL
                     GSLGETIRPLHTSGAVFQNDVQVFDPITLIRTRELGDDVAKTLGPHGAMLLRGHGVNV
                     ADKDVRRVCIMTLWMEEAANYQLRDMSAGKPRYFTPEELQVIYPQVSGEEVSNRAWEY
                     FSSRLEA"
     gene            complement(2737..>3446)
                     /locus_tag="VLM90_01570"
     CDS             complement(2737..>3446)
                     /locus_tag="VLM90_01570"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ11668.1"
                     /translation="QCALSGGRIWYVAIVPWRRPDMAVKEIRRIKTLGCAAGIYARGI
                     EWDRPLTHPDHWPIYEEAANQDLPITVHVGNGSSPMIREMFQGVPRPTYEDGQPHVHP
                     LGRGIVSGPYVLYAFQQILGSKLLEDFPKLRVAFLEAGSEWTVRLLKGLRGRNSAKID
                     QWLAERVFVSCAMDDDLPYIIAKNGDDFLVSATDFPHGDAFRQDQLANGLKARGDLSD
                     ATIEKILSANPQRLFHI"
BASE COUNT          661 a          961 c         1021 g          803 t
ORIGIN      
        1 actgataggc aagtatggta tgtatgttat atcagtaaca ttatctggtg aaatattgat
       61 atttttacaa taattctgat aaatttcgtt atatttgtat tgaaattgga ataaatgtaa
      121 aagatagttg tcagattgaa atttgttgcc gctttctaaa gttgcccatt catttacaat
      181 ctaagcatat gaagaacctc gacgtgttag tttttctcca gcaactcaag ggcggtcatg
      241 aaaacgacct gctcaatagc cgtacttctt ttccatttcc ttgagctcgg cattacccat
      301 gttggcgtac catttgcgcg tgtcctcgat gcccggcgtg tttttgaaat aggccgcttc
      361 ggtgccgttc tttttcagtt cttccaagca ctggcgcatg ccgtgcagca tggcgacttg
      421 cagcaccgtc gggatgcagc cgactcggcc gcccagttca ccatagcgct gcacggtcat
      481 cacgccgcgc ggcggcacgc cgaccagcgg cttgccgagc ttggcgtagg cgaggatttc
      541 ttcctccgtg cgcgcgctca cccatgacgc gtcggcgccg gcttcaatgc aggcttgagt
      601 gcgttccagg cgctcctgca gcgaatcctt ggcttccgag cgggcgatga tgacgagatc
      661 ctggtcggtg cgcgcgtcca ccgcggcttt gatcttggcg acaaactcct ggcgcgagat
      721 cagaccgaca tcgaagcctt catgaccagc gcgcttgggc gtcatctgat cttcgatatg
      781 gatggcggcg acgccggccc ggtcgaattc ttttaccgag cgatagacgt tgacggcgtt
      841 gccgtagccg gtctcagcgt cgctgacgat gggaaggtta accgcatcga cgatttcgcg
      901 cgccttgttg atcatttcgg tgagggtgag caagccggcg tcggcgaagc caagcgaacg
      961 gtgctgtccg ctgccggaaa tatgcaccaa gggaaaaccc agccactcga caagccgggc
     1021 ctggatgcca tcattacagc tcggcgccag atgacaggtc ggttgctgca tcatcgcctt
     1081 taaggctttg cgtttttcgt ttgcggtcat ggtcattatc tctattcctt cctggtttgg
     1141 tttcgcggct tacgcttttt gcacaccggc gcgggcgaat tcatctctgc ggccgaccgt
     1201 ggctttcaac aattccggtg gaattatctt ggcgccgccc agcacttcgg cgtagatcgc
     1261 catctgcgcc gcttcttcga cgatcaaatt ggcccgcgcc gcggcggcgg gcgtggcgcc
     1321 gaaggcgagc acgccgtgat tttccaacag cacggctttg gtattcttcg tctgactcag
     1381 cgcagtggcg atgttcgcta tcgactcgcc ggagccgcgc ggtccgtatt tcgcgagtgg
     1441 cacgccttcg gccatttcat tccgcaccag ggcttcgtag gaacagccca aggcgcggct
     1501 ggctaaagcg aagctggtgg cgtaagtcga atgggtgtgg acgacagcgc cggtgtccgg
     1561 ccgttccttg tagacgatgg cgtgcatgtg gacgatctcg gcgttggtcg gattgatctc
     1621 gccttcgacc agcttgccgt cgagatcgag cagcgcgagg ttttccggct tgagattatc
     1681 gaaggagctc gatgcggtga gcaggatcgt gtcggtgccg ggcacgcgca cgctaaaatt
     1741 gccatggtgg ctcatcgaga tcgcgccgat acgcacaaga aaattcgcgc tctcgatcac
     1801 tgcctggcgc aactcgccat gtttgagtgc cattggtttt tttctccctt cgctcgaccg
     1861 acaatatcgc gtttaattag cgagtctcaa gcccgtgggc catcaagctt cgagccggct
     1921 gctgaaatac tcccaagccc ggttggagac ctcttcaccg gagacctgcg gatagatgac
     1981 ttggagttct tccggcgtga agtagcgcgg cttgcccgcc gacatgtcgc gcagctgata
     2041 atttgccgct tcctccatcc atagcgtcat gatgcagacg cgccggacgt ctttgtcggc
     2101 gacgttgacg ccgtggccgc gcaatagcat tgcgccatgc ggccccaggg ttttggcgac
     2161 atcgtcgccc aactcgcggg tgcggatcaa agtgatcgga tcgaagactt gcacgtcgtt
     2221 ttgaaacacc gcacccgaag tgtgcagcgg ccgaatggtt tcgccgaggg agcccagcac
     2281 gacacagttc ggcggatgaa catgacagac cgattgcacg tcggggcgag ctttataaat
     2341 ccgcgcgtga atccagaatt ccgtgttcgg ccgtccatcg ccttcgagtt ggttgccctc
     2401 gacatcgagc aataagaggt tgtcttctcg caccagcgcc ggactcatgc gcggcgggca
     2461 tatgaatgta ttggtgccgg agatgcgcgc gctgacatgg ccaaaagcgg cggcgattcc
     2521 ttgctggtgc agaatatggc tggcggtgac tatgttttgc ttgagctcgt cggtgtccat
     2581 ggcttacctc tcgcgaagca tctgtgccaa atcatttatg ccaaggcgag aagaatgtcc
     2641 acggctctct ggcctcggaa agaaaccact ggaaggcgag gcaaataatc aggctcgatg
     2701 gcgcgcgccg atacccggcg cgagccccta aggcttttat atgtgaaaca atctctgcgg
     2761 attggcagag aggatttttt cgatggtcgc gtcgcttaga tcgccgcggg ctttaagccc
     2821 gttggccaat tggtcttggc ggaaagcgtc gccatgggga aagtcagtgg cgctgaccag
     2881 gaaatcgtcg ccgttcttgg cgatgatgta cggcagatcg tcgtccatgg cgcaggagac
     2941 gaacacgcgt tcggcgagcc attgatcgat tttcgcactg ttacgtccgc gcagtccttt
     3001 gagcagccgc acggtccatt ccgacccggc ttctaggaac gccacgcgca gtttgggaaa
     3061 atcttcgagc aacttcgagc cgagaatttg ttggaaggcg tagagcacat aggggccgct
     3121 gacgatgccc ctgccgagcg gatggacatg gggctggccg tcttcgtagg tcggccgcgg
     3181 cacaccttga aacatttccc ggatcatcgg actcgacccg ttgccgacat ggacagtgat
     3241 cggcaaatct tgattcgccg cttcttcata aatcggccag tggtcggggt gagtcagcgg
     3301 ccggtcccac tcgatgccgc gggcgtagat gccggcggcg cagccgaggg tttttatccg
     3361 gcggatttct tttaccgcca tgtccggacg gcgccagggc acgatggcga cgtaccaaat
     3421 cctcccgccg gacagggcgc attgag
//
LOCUS       DATIRS010000128         2530 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_403561, whole genome shotgun sequence.
ACCESSION   DATIRS010000128 DATIRS010000000
VERSION     DATIRS010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2530
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_403561"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..256)
                     /locus_tag="VLM90_01575"
     CDS             complement(<1..256)
                     /locus_tag="VLM90_01575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11669.1"
                     /translation="MLYDGAKKEGKVVWYTSLVPSKDIAKIFEAKYPGVAMEVYRAIG
                     IELTNKALAEPKARRYIADTVEATPGALMILRDEQFFAPYT"
     gene            complement(417..1550)
                     /locus_tag="VLM90_01580"
     CDS             complement(417..1550)
                     /locus_tag="VLM90_01580"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSQ11670.1"
                     /translation="MDLKLNDDQNMMKKVAGDFLKAEAPSHVITEWYQKKIAHLPELY
                     KKTAGVGWLGMTVPDEFGGGGSSATDCAVVFEELGRGPLPGPFFSSGVLAAQLFLEGG
                     SAAQQKSWLPKICDGTAIVIPALSDDPIQFGPKSVQTRAIKSASGFTLSGTKRYVQDG
                     DAASQFICAARSDSGGVVLALVDRNAPGVSVKPVFGFMIGAAEVSFDNVAVGAHALIG
                     TVDSGWPVLEAALTKALPILCAYQVGACQEIFEMTNEYTRTRVVFGQPIGRFQRVQDH
                     CVDISIHLDGARWITYETLWKIDSAVAATAGAHQSKAVASEAYYQSCHFAHMVFAGAG
                     TDYKHPLMAHSVLAHALYQYLGTPLYHKRAMIDAMYPRQAKVG"
     gene            complement(1679..>2530)
                     /locus_tag="VLM90_01585"
     CDS             complement(1679..>2530)
                     /locus_tag="VLM90_01585"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSQ11671.1"
                     /translation="EFLPPMMRGELAVWQVLTEPQGGSDVANCQTKAIRDGDDYIVNG
                     QKVLVGHHLPPDFLWTFVCTNPAGKRHENLGWLYIPATLPGITIQHMHLMMGIKNAVF
                     FDNVRVPAKYLVGGENNGWKVANSYLELEHGGGGSVAEHPLFARLIAHCQRTNFDGES
                     LMEDQDVRDVLAEMLIDLDVQRLMGLRNFWHRYVKQPHSYGGPQFLFFQRMVRLRNAE
                     RVQKICGYDALAPDDSVHEVADFEYTVRSGPGWLHGGGTLDTDRLIIARRLGLGRPSQ
                     EDAPTTV"
BASE COUNT          551 a          786 c          675 g          518 t
ORIGIN      
        1 aggtgtaggg cgcaaaaaac tgctcgtcgc gcaagatcat caacgccccc ggggtcgcct
       61 cgacagtatc agcgatgtaa cgacgcgcct taggctcagc caaggcttta ttggtcaact
      121 cgatgccgat ggcgcgatag acttccatcg caacgccggg atatttcgcc tcgaagattt
      181 tagcgatgtc cttggacggc accaatgatg tgtaccaaac gactttgccc tccttcttcg
      241 cgccgtcgta aagcatcttc tcgcgatcac cccgggcata cttggctaat tcagcaacac
      301 ccttgcctgt ttgagcagac gcgacaccaa ctacgaacaa cgccatccca acaactagcg
      361 aataacactt tgggcaaatc ttcatgcgaa aaccccttac ccgttaccct tcgctcctaa
      421 ccaaccttcg cctggcgcgg atacatggca tcgatcatcg cccgcttgtg atacagcggc
      481 gtgcccaaat actgatacag ggcatgggcc agcacgctgt gcgccatcag cggatgtttg
      541 tagtccgtgc cggcgccggc aaacaccatg tgggcaaaat ggcaggactg gtagtaggct
      601 tcgctagcca ctgctttgga ttgatgtgct ccggcggtgg cggcaacggc cgagtcaatc
      661 ttccacaagg tctcgtaagt aatccaacgc gcgccgtcca ggtggattga tatatcgaca
      721 cagtgatcct gcacccgctg gaagcgtccg atcggctgac cgaagaccac gcgggtacgg
      781 gtgtactcgt tggtcatttc gaaaatctct tggcaggcac ccacctggta ggcacacagt
      841 atcggcaaag ctttggtgag cgcggcttcc agcaccggcc atcccgaatc caccgtgccg
      901 atgagcgcgt gcgctccgac ggcaacattg tcaaagctca cttccgccgc gccaatcatg
      961 aagccaaaca ccggcttcac cgaaactccc ggcgcattgc ggtcgaccaa agcgagcacg
     1021 acgcccccgc tgtcgctgcg cgccgcgcaa ataaactgac tcgccgcgtc gccatcctgg
     1081 acgtagcgct tggtgccgct gagagtgaat ccgctagcac tcttaatcgc gcgggtctgc
     1141 actgatttcg ggccgaactg aatgggatcg tcggagagcg caggaatcac gatggcagta
     1201 ccatcgcaaa tcttcggcaa ccaggacttt tgctgcgccg cgctgccccc ttctaaaaac
     1261 aattgcgccg ccaagacgcc gctggaaaaa aaggggccgg gcaagggccc gcggccaagt
     1321 tcttcaaaga ccacggcgca gtccgtagcg gacgatccgc cgccgccaaa ctcgtcgggc
     1381 accgtcatgc caagccaacc gacgccggcg gtctttttat acagctcagg aagatgggcg
     1441 attttctttt gataccattc agtaatgaca tgcgacggcg cttcggcttt caaaaaatcc
     1501 cccgccactt tcttcatcat attttgatcg tcgtttagtt tgagatccat aatccgtatc
     1561 ctttcgcttc ggtgcagcgc gggcgatcgg caagggcaac cacagggggt tgcccctaaa
     1621 cgtccaaatt catttttgcg tcctttgcgc gctttgcggc cattccctca tcatcatcct
     1681 ataccgtcgt cggcgcgtcc tcctgagacg gccggcccaa acctaagcgg cgcgctatga
     1741 tcagccggtc ggtatccagc gtgccgccgc catggagcca gccgggaccg ctgcgcacag
     1801 tgtattcgaa gtcggccact tcatgcaccg aatcatccgg cgccagggcg tcgtagccgc
     1861 aaatcttctg cacgcgctcg gcattgcgca agcgcaccat tcgctgaaaa aagagaaatt
     1921 gcggtccgcc ataggaatgg ggctgcttga cataacgatg ccaaaaattg cgcaagccca
     1981 tcaaccgttg gacatccaaa tcgatgagca tctcggctag gacatcgcgc acgtcctgat
     2041 cctccatcaa actctcgccg tcaaagttag tccgttgaca atgggcgatg agccgcgcga
     2101 atagcggatg ctcggcgaca ctgccaccgc cgccatgctc gagttccaaa taactgttgg
     2161 cgaccttcca gccgttgttc tcgccgccga ccagatattt cgccggcacg cggacgttgt
     2221 cgaagaacac ggcattctta atgcccatca tcaagtgcat atgctggatg gtaatgcccg
     2281 gaagcgtcgc cgggatgtac agccagccca agttttcatg gcgcttgccg gcgggattgg
     2341 tgcagacaaa ggtccagaga aagtccggcg gcaaatgatg gccgaccagg actttttgac
     2401 cgttgacgat gtaatcgtcg ccgtcgcgga tcgccttggt ctggcagttg gcgacgtcgc
     2461 tgccgccttg aggttccgtg agtacttgcc ataccgccag ttcgccacgc atcatcggcg
     2521 gcagaaactc
//
LOCUS       DATIRS010000129         1710 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_108235, whole genome shotgun sequence.
ACCESSION   DATIRS010000129 DATIRS010000000
VERSION     DATIRS010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1710
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108235"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1028
                     /locus_tag="VLM90_01590"
     CDS             <1..1028
                     /locus_tag="VLM90_01590"
                     /inference="COORDINATES: protein motif:HMM:NF028476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyl hydrolase family 65 protein"
                     /protein_id="HSQ11672.1"
                     /translation="LIGTGDWNDGMNRVGAAVKGESVWLGWFLHTNLWEFARLADGRG
                     EHQRAETWRVHVSALKAALELKAWDGEWYRRAYFDDGTPLGSATNTECRIDSIAQSWG
                     VISGAAEPARGARAMAAVEKYLVRRGDDLVLLFTPPFDRASSDPGYIKGYLPGVRENG
                     GQYTHAAIWSVLAFAALGDGDKAGELFALLNPINHANSRAGVYRYKVEPYVVAADIYA
                     EPPHVGRGGWTWYTGSAGWIYRAGIEWILGFHLRGTRLYFDPCIPRAWRGFEMVFRYH
                     SARYEITVENPHGVARGVAGVELDGLSLTDGKMHIELADDGATHHVRVTLRSESLPLA
                     LHAATPL"
     gene            1037..>1710
                     /locus_tag="VLM90_01595"
     CDS             1037..>1710
                     /locus_tag="VLM90_01595"
                     /inference="COORDINATES: protein motif:HMM:NF014919.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11673.1"
                     /translation="MAITPHTDKQLSVGNCYPLGATLMEDGVNFAIYSKNARAVYLLL
                     FDQPNGAPTDIIRLATRTKFIWHTFVRGLKAGQMYGYKVSGDFDPARGLRFNEDKLLI
                     DPYAKALTGKARNADNLLLAYDAGSAEHDRSLDRRDNLSVVPKSIVIDDRFDCQGDRA
                     LNIPFEQLYIYEVHLKGFTAHASSSVAHPGTYLGFIDKIPYLKELGINAVELLPIHEH
                     YDDDFLL"
BASE COUNT          346 a          491 c          497 g          376 t
ORIGIN      
        1 cgttgatcgg cacgggcgac tggaacgatg gcatgaaccg ggttggcgct gccgtgaaag
       61 gcgagagcgt ctggctcggc tggtttctcc acaccaacct ctgggagttt gcccggctgg
      121 ccgatggccg tggcgagcac cagcgcgccg aaacctggcg agtgcatgtc agcgcgctca
      181 aagcagcgct cgaactgaag gcgtgggatg gcgagtggta tcggcgtgcc tacttcgacg
      241 atggaacccc gctcggctcg gcgacgaaca cggaatgccg catcgattcg atcgcccaat
      301 cctggggagt catttccggt gctgctgagc cggctcgtgg agcacgcgcc atggcggcgg
      361 ttgagaagta cctagtgcgg cggggagacg atctggtact tcttttcacc ccgccttttg
      421 accgtgcaag ctcggacccg ggctacatca aaggatacct gcccggcgtc cgcgaaaatg
      481 gcggccaata tacccatgcg gcgatctggt ccgtgctcgc tttcgccgcg ctcggcgacg
      541 gcgataaggc cggtgaactt ttcgcgctct tgaacccgat caatcatgcc aacagccgcg
      601 ccggcgttta ccgctacaag gtcgagccct acgtcgtcgc cgctgatatt tatgccgaac
      661 cgccgcatgt cggtcgcggc ggctggacat ggtacacagg gtccgcggga tggatttatc
      721 gggctggtat cgagtggatt ctggggttcc atctgcgcgg cacgaggctt tatttcgacc
      781 cctgtatacc acgtgcgtgg cggggctttg aaatggtttt ccgctatcac tcggcgcgct
      841 acgaaatcac cgttgagaac ccgcacggag ttgcgcgagg ggtggcgggt gttgaactcg
      901 atggcttatc gcttacagat ggcaaaatgc atatcgagct cgccgatgac ggcgcaacgc
      961 accatgtgcg cgtaaccctg aggtcagaga gcctgccgct cgcgctccat gctgcgacac
     1021 ctttgtgaca gcggaaatgg ccatcacacc tcacactgac aaacaacttt ctgtcggcaa
     1081 ctgttatcct ttgggcgcga ccttgatgga agatggcgtt aatttcgcca tttatagcaa
     1141 aaacgctcgg gccgtctatc tgctgctgtt tgatcaaccg aacggcgcgc cgacggacat
     1201 cattagacta gcgacgagga ctaaatttat ttggcatacg tttgttcgtg gacttaaggc
     1261 cggacaaatg tatggctaca aagtctcggg cgatttcgat ccggcgcggg gcctgcgctt
     1321 caacgaagac aaattgctca tcgaccccta tgccaaagcg ttaaccggta aagcacgcaa
     1381 tgccgacaat ctcctcttgg cttacgacgc cggttctgcc gagcacgatc gctcgctgga
     1441 tcgtcgcgac aatctttcgg tcgttcccaa gtcgatcgtc atcgatgacc ggttcgattg
     1501 tcaaggggac cgcgctctca atattccctt tgaacaactg tacatctacg aagtccattt
     1561 gaaaggcttc acggcgcatg cgtcttcgag cgtggcacat cctggaacgt atctcggatt
     1621 catcgataag attccctacc tcaaagagct gggcatcaac gccgtcgagt tgctgccgat
     1681 ccatgagcac tacgacgatg attttttact
//
LOCUS       DATIRS010000130         1684 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_305193, whole genome shotgun sequence.
ACCESSION   DATIRS010000130 DATIRS010000000
VERSION     DATIRS010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1684)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1684)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1684
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_305193"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..344
                     /locus_tag="VLM90_01600"
     CDS             <1..344
                     /locus_tag="VLM90_01600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11674.1"
                     /translation="VNPFPFLELLHLLRIASTWRQLDASPCGSRVIAAWQSIAKRRDV
                     IGKIVESSRVGGGLAVILLRGRSLAGRSSVHSRCRRNEFVLLTPFSRSRADLPIEPSF
                     YRNAVGGMVEQ"
     gene            381..1280
                     /locus_tag="VLM90_01605"
     CDS             381..1280
                     /locus_tag="VLM90_01605"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSQ11675.1"
                     /translation="MYKKILVPLDGSATAEAVLPYVEAFAAGFKTSVELLSVIDIGAM
                     TIHVAPDKVRQMDSIIVAEEKKCAEYLANVAKRFSHAATECRMIRGTPAETILESTRQ
                     ERDTLIAMATHGRSGAKRWLLGSVAEKVLRGTTNPLFLVRAAAAKTSPQRIINSLVVP
                     LDGSPLAEQILPTVCRWARALDVEVTLIRAFEFPARAYVSSEAYLPDYDEMREDARRE
                     AAAYLKEKEDFLVGEGVRTVSILTIEGAAANEIISYAQTAPGAVIAMSTHGRSGIQRW
                     ILGSVTEKIVRHADDPVLVVRGE"
     gene            complement(1331..>1684)
                     /locus_tag="VLM90_01610"
     CDS             complement(1331..>1684)
                     /locus_tag="VLM90_01610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11676.1"
                     /translation="LLAKQLELKGWSYPKHLAGRAFSIVAHGDAAGPENLRRMLTDWL
                     TDMAMVPAGPTALIDTWVGWYQPYATSHDDLDKDNDLFAEVSNAALALANMVKLMRTG
                     KYHAPDEKLRDPREK"
BASE COUNT          332 a          462 c          538 g          352 t
ORIGIN      
        1 acgttaaccc gttcccattc ttagaattac tccaccttct tagaattgct tcaacgtggc
       61 gccagctcga tgcctcgcca tgcgggtcgc gtgtgatcgc ggcgtggcag agcatagcga
      121 agcggcggga cgtgatcggc aagatcgtcg agagcagccg cgttggtggc ggattggctg
      181 tcattctcct aaggggacgc tcattggctg gcagatcaag tgtacacagc cgttgtcgca
      241 gaaatgaatt tgttctgctt accccgtttt cccgcagtcg agctgatctg ccgattgagc
      301 cgagctttta tcggaatgct gttggtggca tggtggagca gtagcgatat ttggcaattg
      361 gtaatggcaa ggaggccaag atgtataaaa aaatcctggt gccgttggac ggttcggcaa
      421 cggcggaagc ggtgctgccc tacgttgagg catttgcggc cggattcaag acctcggtgg
      481 agctgctgtc ggtcatcgat atcggcgcga tgacgatcca tgtggcgccg gacaaagtcc
      541 gccagatgga cagcatcatc gttgccgagg aaaagaagtg cgcggagtat ttggcaaatg
      601 tcgccaagcg cttctcccac gcggcgaccg agtgccggat gattcgcggc acacccgcgg
      661 aaaccattct tgaaagcacc cgtcaggagc gcgataccct gatcgccatg gcgacccacg
      721 gtcgctcagg ggcgaagcgc tggttgttgg ggagtgtggc cgagaaggtg ctgcgcggca
      781 ccaccaatcc attgttcctg gtgcgggcgg cggcggcgaa gacatcgccg cagcggatca
      841 tcaattcgct cgtcgtcccc ctggacggtt cgccgctggc ggagcagata ctaccgactg
      901 tttgccgctg ggcgcgagcg cttgacgtcg aggtgacact gattcgcgct ttcgagtttc
      961 ccgcgagagc gtacgttagc agcgaagctt acctgcccga ctacgacgag atgcgcgagg
     1021 atgcgcgcag ggaagcggcc gcctatctca aagagaagga agattttctg gttggcgagg
     1081 gcgtgcggac ggtgtcgatt ctaacgattg aaggcgccgc cgccaacgaa attatcagct
     1141 acgcgcagac ggcgccgggc gcagtgatcg ccatgtcgac ccatggccgc tccggcatcc
     1201 aacgctggat actcggcagc gtcactgaaa aaatcgtgcg tcacgccgac gatccggttc
     1261 tggtggtacg gggcgaatga aaacaatcgc cggttcggca taagcgccgc tcaatctcgg
     1321 tcgctgcggt ttatttctcc cgcgggtcac gcagcttttc gtccggcgca tgatactttc
     1381 ccgtgcgcat gagctttacc atattggcga gcgccagggc ggcgttgctc acttcggcga
     1441 ataagtcgtt gtctttatcg agatcgtcgt gactggttgc gtagggttgg taccagccga
     1501 cccaagtatc gatcagcgcc gtcggacccg caggaaccat tgccatatcg gtgagccagt
     1561 cggtcaacat gcggcggagg ttttccggac cggcggcgtc gccatgggcg acgatcgaga
     1621 aagcgcggcc ggcgagatgc ttgggatagc tccaaccttt gagctcaagc tgctttgcca
     1681 atag
//
LOCUS       DATIRS010000131         4693 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_698498, whole genome shotgun sequence.
ACCESSION   DATIRS010000131 DATIRS010000000
VERSION     DATIRS010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4693
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_698498"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..693)
                     /locus_tag="VLM90_01615"
     CDS             complement(<1..693)
                     /locus_tag="VLM90_01615"
                     /inference="COORDINATES: protein motif:HMM:NF021653.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E/G"
                     /protein_id="HSQ11677.1"
                     /translation="MKQEIIVNSTPQESRIALVEDGLLAELLVERKEEMGIAGNIYKG
                     KVARVLPGMQAAFVEIGMDKAGFLHASDFSALDDVHLISPAGDDVEFEEAPAPKPSPS
                     RHLPLEKQLSRGEEVLVQVAKDPLGTKGARVTSHISLPGRYMVFMPGNKHIGISRRIE
                     SDEERKRLKEIAQSLGTEEGGFILRTACEGLSKREIQHDLGFLQKLWKSIQKKAESAP
                     SPSLIHQDLDLIA"
     gene            945..1577
                     /locus_tag="VLM90_01620"
     CDS             945..1577
                     /locus_tag="VLM90_01620"
                     /inference="COORDINATES: protein motif:HMM:NF025637.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HSQ11678.1"
                     /translation="MSYSATASGYSILNTKVLILNRSYLPIHVTSVKRAFVLLYQGIA
                     KAVNEQYQTFDFDSWSDLSISAHYETVGMVNRVIRVPRVILLVTYDRVPKRQVRFSRF
                     NIYARDKLTCQYCHRRLPRQELNLDHVIPRSQGGVSIWENVVCSCHECNRRKGGRTPQ
                     QAGMLLTRNPVRPQWTPFMQETFSLSRYREWTPFLNTVDASYWNTELLER"
     gene            1791..>4693
                     /gene="smc"
                     /locus_tag="VLM90_01625"
     CDS             1791..>4693
                     /gene="smc"
                     /locus_tag="VLM90_01625"
                     /inference="COORDINATES: protein motif:HMM:TIGR02168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HSQ11679.1"
                     /translation="MRLKRLEMVGFKSFAEKTAVEFNPGVTAVVGPNGCGKSNIVDAL
                     RWAMGEQSARHLRGHQMEDVVFAGSDSLPPTGMAEVSITFDNEDRRSPAEYSNLSEIM
                     VTRRLFRSGESEYAINKINCRLKDVIELFLGSGVGSKAYSIVEQGKVDDLVNAKPEER
                     RGLIEEAAGTSMYKSRKVVAEKKLERTQQNLLRVSDIVREIERQIRTMELQAKKAERY
                     RALRAELREKDFAFTAMQRDAFHGEIAQQEQRLAAVENRLAEYLATLHGKEAENESVR
                     LSLLEADKAIGAQQEDAFQRRTQIQTDEQKCEFYRRDLEQLEQAENEARIALTTVDER
                     LRTLNQEIEELTKAKDSFIQLSLFEETFLRERETELTGLQAQIRTLQEDIDREKTALI
                     DAANQIAYLKNDSLAKDKRQAEIAAELARCQSESSQATGALTACAERREETGQALNSC
                     VDELRERALESTMVTASIQTLSHARDEQQQHIDGLKSEIQEHRSRLMSLEDLQRNYEG
                     YQEGVRAIMLKKQQAISPNGVYGLVAEVIEAPESYEKALTAVLGDRLQYIIVKGHEEG
                     IESIEFLKQQASGRGSFMPMQLRHRQQEPLPLGEAEVIAPLLDMVSIKDGYREIAEYL
                     LSDVIVVPNLTAGLALWNRNGYYCTIVTPDGEVIDSTGTVTGGSTTPLEGNLLAQRRR
                     IRELGSALADCAARLPDAESEFDKIKAELDQAQTRRTILSNESHRLELDRVRLEHENR
                     AASQEHERLSRTLQALSQEQSELTAALQNLRDELERNYQMIEARTAQKLTGEQTLAQR
                     QESFGALRSAVESAEAAVTQSRIRNAALGEKRENTHANLANRLSQRDATTQEIASWQS
                     RGADCQRQRSEIAEALGQTEASLSGGREELQDLESRLQADRQNYRNISMQLAEIGETI
                     KELRPLGESCQEERSQIQLTLAEKRLKLQHLADNLREKYDTDLVSLAHQADDDG"
BASE COUNT         1105 a         1417 c         1330 g          841 t
ORIGIN      
        1 cgcaattaga tcgaggtcct gatgaatcag cgatggcgac ggcgcgcttt cggctttttt
       61 ctgaatgctt ttccagagct tctgcaaaaa acccaggtcg tgctgaatct cgcgcttgct
      121 cagcccctcg caggctgtgc gcagaatgaa gcccccttcc tcggtaccca aggactgggc
      181 gatctccttg agccgtttgc gttcctcatc gctttcgatg cgccgcgaga tgccgatatg
      241 cttattgccc ggcatgaaaa ccatgtagcg gcccggcagg gaaatatgcg acgtcacccg
      301 cgcgcctttg gtgccgagcg gatccttggc gacttgcacg agcacttcct cgccgcggga
      361 aagctgcttt tccaagggca gatggcgcga tgggctgggc ttgggcgccg gcgcctcttc
      421 gaattcgaca tcgtcgccgg cggggctgat cagatggacg tcatcgaggg cggaaaagtc
      481 cgaggcgtgg agaaatcccg ccttgtccat gccaatctcg acaaaagccg cttgcatgcc
      541 gggtaaaacc cgcgcgactt tgcctttgta aatattgccc gcgatgccca tctcttcttt
      601 tcgttcaacc aatagctcgg ctaagagacc atcttcgacg agcgcgatgc ggctttcctg
      661 gggcgtggaa ttgacaatga tttcttgttt cataattttc tgtagacact aaactcttgg
      721 cgatgccggt gggtgcggtg cgaggcgggc cgtgtaggga ctagcgcaac cgacgaatgc
      781 aaaaaagaaa gtagctgaca tgagttataa aagaaatcgc cggtgagatc aagatgaagc
      841 gcgcgcttgg ccaatcggca aattgacttt ggcgcgggag cccggtattt tcacgagaat
      901 accgtcgacc cgatcgccat cattctgcgt gatcaaagct gactatgagt tattcagcca
      961 ccgcgtcagg ttattcgatc ctcaacacca aggtcctgat ccttaatcgg tcctacctgc
     1021 cgatccatgt cacctcagtc aagcgcgcct tcgtgctgct ctaccagggc atcgccaaag
     1081 cggtaaacga acagtatcaa accttcgatt tcgacagctg gagcgatctt tcgatctccg
     1141 cccattacga gaccgtcggc atggtcaatc gcgtcattcg cgtgccccgg gtgatcctgc
     1201 tggtgaccta cgaccgcgtg cctaagcgcc aggtccgctt cagccgcttc aatatttatg
     1261 cccgggataa gttgacctgc cagtactgcc accggcggct gccgcgccag gaactcaatc
     1321 tcgatcacgt cattccgcgt tcccaaggcg gcgtatcgat ttgggaaaat gtcgtctgct
     1381 cttgccatga gtgcaatcgg cgcaaaggcg gccggacacc gcaacaggct ggcatgctgc
     1441 tgacgcgaaa tccggtgcgc ccgcagtgga cgccgttcat gcaggagacc ttcagcctgt
     1501 cgcgttaccg ggagtggacc ccattcctca atacggtcga cgcctcatac tggaataccg
     1561 agctactcga gcgctagcgc cggtcgatcc ggctgatccc gccgaactta tccacaggcc
     1621 atcctccgga aagccggtgg caacgcgtta attcaatata tagtggtaag ttatccacaa
     1681 gccccaccgt atcttgtgat ttatccttga cacccccaga atgctatgaa atagtggcgg
     1741 catatttagc ttaccgagtc cgcccaaaag ttacctaaaa tagaataaaa atgcgcctca
     1801 aacgccttga aatggttggt tttaagtcct ttgccgagaa gactgccgtg gagttcaatc
     1861 caggggtcac ggcggtggtc ggcccgaacg gctgcggcaa gtccaacatc gtcgacgccc
     1921 tgcgctgggc catgggcgag caaagcgccc gccacttgcg cggccatcaa atggaggacg
     1981 tggtcttcgc cggcagcgat agcctcccgc ccaccggcat ggctgaagta tcgatcacct
     2041 tcgacaacga agatcgccgc agcccggcgg agtacagcaa tttgagcgag atcatggtca
     2101 cccgccggct atttcgctcg ggcgagtccg agtatgccat caataaaatc aactgccggc
     2161 taaaggacgt gatcgagctg tttttgggca gcggtgttgg cagcaaggca tactccatcg
     2221 tcgagcaggg caaggtcgat gatttggtca atgccaaacc ggaagaacgg cgcggcctga
     2281 tcgaagaagc ggccggcacc agcatgtaca agagccgcaa ggtggtcgcc gagaaaaaac
     2341 tcgagcgcac ccagcaaaac ctcttgcgcg tcagtgatat cgtccgtgag atcgaacggc
     2401 agatccgcac catggagttg caggccaaga aggccgagcg ttaccgcgcc ctcagagccg
     2461 aactgcgcga aaaagatttc gccttcaccg cgatgcagcg cgacgctttc catggcgaga
     2521 tcgcccagca ggaacagcgg ctcgccgctg tcgaaaaccg cctggccgaa tatcttgcca
     2581 cactccatgg caaggaggcg gagaacgaat cggtgcggct atcgctgctc gaagccgaca
     2641 aggccatcgg cgcccagcaa gaagacgcgt ttcaacgccg cacgcagatc caaaccgacg
     2701 agcagaaatg cgagttctac cggcgcgatc tcgagcaact agaacaagcg gaaaacgaag
     2761 ccagaatcgc cctaaccacg gttgacgagc ggctgagaac cctgaaccag gagatcgaag
     2821 aactcactaa ggctaaagac agctttatcc agctgtctct tttcgaagaa acttttctgc
     2881 gcgagcgcga gaccgaactg accggcctgc aggcgcagat ccgcaccctg caggaagaca
     2941 tcgaccggga aaaaaccgcg ctcatcgacg ccgccaacca gatcgcttat ttgaaaaatg
     3001 acagcctggc gaaagacaaa cgccaggcag aaattgccgc cgagctggcg cgctgccaaa
     3061 gcgaatcttc ccaggcgacc ggcgcgttga ccgcgtgcgc cgaacggcgc gaggagaccg
     3121 gccaggcgct aaactcctgc gtcgacgagc tgcgcgagcg cgcgctcgaa tcgaccatgg
     3181 tgacggcgtc gatccagacc ctcagccatg cgcgcgacga gcaacagcag cacatcgacg
     3241 gcctcaaatc tgagatccag gaacaccgtt cacgactcat gtccctggaa gacctccagc
     3301 gcaactacga aggctaccag gaaggcgtgc gcgccatcat gctcaagaag cagcaggcga
     3361 tttcgcccaa cggtgtttac ggcctggtcg ccgaggtcat cgaagcgccg gaaagctacg
     3421 agaaggcctt gaccgccgtc ttgggcgacc ggcttcaata catcatcgtc aagggccatg
     3481 aagagggcat cgagtcgatc gaattcctca agcaacaggc gtcgggccgc ggcagcttta
     3541 tgcccatgca gttgcgccac cgtcaacaag aacccctgcc gctcggcgaa gccgaggtga
     3601 tcgcgccttt gctcgacatg gtgtcgataa aagacggcta tcgggaaatc gccgagtatt
     3661 tgctctcgga cgtaatcgtc gtgccaaacc tgaccgccgg tttggcccta tggaaccgca
     3721 acggttatta ctgcaccatt gtcacaccgg acggcgaggt aatcgattcc accggcaccg
     3781 taaccggcgg cagcaccacc cccttggaag gcaatttgct cgcccagcgc cggcgcattc
     3841 gcgaactcgg cagcgctctg gccgattgcg ccgcccgact accagacgcg gagagcgagt
     3901 ttgacaaaat caaagcagaa ctcgatcaag cgcaaacccg tcgaactatc ctgagcaacg
     3961 agagccatcg cctcgaactc gaccgggtgc gcttggaaca tgagaaccgt gccgccagtc
     4021 aggaacatga acgcttgagc cgtaccttgc aggcgctcag ccaggagcag agcgagctca
     4081 cggccgcgtt gcaaaatctg cgcgacgagc tcgagcgcaa ttaccaaatg atcgaagccc
     4141 gcacggcgca gaaactgacc ggcgaacaaa ccctggcgca gcggcaggag agcttcggcg
     4201 cgctacgcag cgccgtcgag agcgccgaag cggcggtgac ccagtcgcgc attcgcaatg
     4261 ccgccttggg agaaaaacgc gagaacaccc atgccaatct cgccaatcgc ttaagccaac
     4321 gagacgcgac cacacaagag atcgcgagct ggcaaagccg cggcgccgat tgtcaaaggc
     4381 aacgcagtga aatcgccgaa gcgctgggcc agaccgaagc ttcgttgagc ggcggccggg
     4441 aagagctcca ggacttagag agccggcttc aggccgaccg gcaaaattat cggaatatct
     4501 ccatgcagct cgctgagatc ggcgagacca tcaaggagct gcgcccgctg ggcgaaagct
     4561 gtcaggaaga gcgtagccaa attcagctga cgctcgctga aaagcgtctc aaactgcagc
     4621 acctggccga caacctgcgc gagaaatacg acaccgactt ggtttccctg gcccatcagg
     4681 cggacgatga cgg
//
LOCUS       DATIRS010000132         2304 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1583312, whole genome shotgun sequence.
ACCESSION   DATIRS010000132 DATIRS010000000
VERSION     DATIRS010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2304)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2304)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2304
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1583312"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            254..1201
                     /locus_tag="VLM90_01630"
     CDS             254..1201
                     /locus_tag="VLM90_01630"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ11680.1"
                     /translation="MRRIVIASIAILVSTVTGAQAQPVRGAFPSPSVQILPMMVAQER
                     GFFKREGLDLELIFVRGATTAVQALIANQIHFIFSIGPQMPAVWEGNDIILLAQQVGR
                     PTFSLVVTPDIQKIADLKGKKIGVTFGGSTAAGTKALLELNKINPDKDVEYIGLPGNE
                     PKIAAMKQGIISAALLAPPADYLAMKSGLKRLVSLADIFKDTAFTGLAANRKTIIENP
                     QMVKRMVRAIVRSVLHTRDNPEDALQVLTKRLGLERDAAQDAYHMIKDALVPVPTEKG
                     VELMAQWQAIALNIKPKRKPGEYMDLRFVNEVMAELGQK"
     gene            1472..2131
                     /locus_tag="VLM90_01635"
     CDS             1472..2131
                     /locus_tag="VLM90_01635"
                     /inference="COORDINATES: protein motif:HMM:NF019339.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSQ11681.1"
                     /translation="MKLTKNLAWVWVIVLLTGCAAYNTAGQVQSGRHALLVNDPELAL
                     PYFLQAAQADPNFVYQSVNFREGIWTYVGRSQYATKRYGEARQSLERALAVDPNDQLA
                     RLYFGLTLARSGEAARGTKEILSAMRGLHDWLEYMNRSRPFTAFWDPLREIRKAIEIH
                     VPGAPGNDAVTSEQLIPDAEWLGNKMEDEIERVRQDERRLYERNFDRSRGSSIGLGLG
                     F"
BASE COUNT          506 a          628 c          711 g          459 t
ORIGIN      
        1 tcggattgct tccgcgtaca atcgtcattc ccgcgcaggc gggaatccag gcggagggcg
       61 ggtcgcgccc cgccactacg aagaatcgcc tggattcccg ttttcacggg aatgacggaa
      121 ggggagatta gcagtcggct ggccgatctc ttttaaattc ctcgattata gccgaggatt
      181 ggagagggaa gttttccttg acgctgttgc ctggccgttc taagtggata gtcatctcac
      241 gaaggagaaa accatgcgcc gcattgttat tgcatccatc gcaattctag ttagcaccgt
      301 caccggtgcg caggcccagc cggtgcgcgg ggcgtttcca tcgccgagcg tgcagatcct
      361 gccgatgatg gtggcgcagg agcgcggctt ttttaaacgc gaagggttgg atctagagct
      421 gatttttgtc cgtggcgcga cgacggcggt gcaggctctg atcgccaacc agatccattt
      481 tattttctcc atcgggccgc aaatgccggc ggtgtgggag ggcaatgata tcatcctgct
      541 cgcccagcaa gtcggccggc cgacgttctc gctggtggtg acgccggata ttcaaaagat
      601 cgccgatctc aaaggcaaga agatcggcgt gaccttcggc ggctcgacgg cggcgggaac
      661 caaggcgttg ctcgaactca acaagatcaa tcccgacaaa gatgttgagt atatcggctt
      721 gccgggcaac gagcccaaga tcgcggcgat gaagcagggg attatctcgg cggcgttact
      781 ggcgccgccg gcggattatt tggcgatgaa atcggggctc aagcggctgg tgagcttggc
      841 ggatattttc aaggacacgg cgttcaccgg cctggcggcg aaccgaaaaa cgatcatcga
      901 aaatccccag atggtcaagc gcatggtccg cgccatcgtc cgctcggtgc tgcatacccg
      961 cgataacccg gaagatgcgc tgcaagtctt gaccaagcgg ctcggcttgg aacgcgacgc
     1021 tgcacaggat gcctaccata tgatcaaaga cgcgctggtg ccggtgccga cggaaaaagg
     1081 cgtggagctg atggcccagt ggcaagcgat cgcgttgaac atcaagccga agcgcaagcc
     1141 gggagagtat atggacctgc gcttcgtcaa cgaagtgatg gcggagctgg ggcagaagtg
     1201 actgagcgca aattcggaac ttctcccgca aaggcgccaa ggcgcaaagg tgacgggccg
     1261 catccgtcat accgttggaa aacggtatcc aggtggaggg atggggatgg accctggttt
     1321 tcaccggggt gacgataaag ccggaatgac aagaatgaga gtcgagttcc atgagatgaa
     1381 ttcagaatca ttcggcttag agccgagggt cgatcgctgg tcagcgattg cgcgttgaca
     1441 ttccttttgc cgaggcctag cctttgatcc tatgaagctg acaaagaacc tcgcatgggt
     1501 ctgggtgatt gttcttctca ccggctgcgc cgcttacaac accgcgggcc aagttcagtc
     1561 cggccggcac gcgctcctag tgaacgatcc cgaactcgct ctgccttact ttctccaagc
     1621 ggcacaggct gaccccaact ttgtctacca atcggttaat ttccgcgaag gcatttggac
     1681 ttacgtcggc cgttcgcaat acgcaaccaa gcgctatggc gaagcgcgcc agtcgctgga
     1741 gcgcgcactt gcggtcgatc cgaacgatca actggcgcgg ctttacttcg gccttacgct
     1801 ggcgcgcagc ggcgaagccg cgcgcggtac caaggagata ctgagcgcca tgcgcgggct
     1861 tcacgattgg ctcgaatata tgaaccggag ccggcccttc acggcttttt gggatccgct
     1921 acgggaaatc cgcaaggcca tcgagattca tgtgccgggc gcaccgggca acgacgccgt
     1981 tacttccgag cagctcatcc ccgacgccga gtggctcggc aacaagatgg aagatgaaat
     2041 cgagcgcgtg cgccaggacg agcgacgcct atacgagcgc aacttcgatc ggagccgggg
     2101 ctcgtcgatt gggttagggc tcggattcta agcgaattat ttacaattcg aacggaggtc
     2161 atcaccccat ggcagcaacc tatgaagttc gttttcagac cgtggcgccg gaaaggcgcg
     2221 ccgattatgt gaagatgtac aagcaagcga ttcaggagat caaacaggcc ggctgttcca
     2281 acggtctgat cttgtgcagc gaaa
//
LOCUS       DATIRS010000133         3174 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_895124, whole genome shotgun sequence.
ACCESSION   DATIRS010000133 DATIRS010000000
VERSION     DATIRS010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3174
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_895124"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            326..1252
                     /locus_tag="VLM90_01640"
     CDS             326..1252
                     /locus_tag="VLM90_01640"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ11682.1"
                     /translation="MAELIKIKAGFATIGQGAGPMMVTWKAGLFRKHGLDVDRPPVMG
                     SAKGVVRGLMSGDIQFGNLAAPAPLRANLKGEADVVFLTGGINQQFLVGRPGINSREE
                     LSGKKIGTVNDGGIGDALVKFVVAKLDAAGVKGLQQVTIGHGAEAEMAALLSGTVDVV
                     VGTPPECIDSIRHGCKYLIDFAEYGLNYALGGIAGRRDYIEKNPEITRQFVKAYVEGM
                     HRYRTDREFTVDVQADYSGIADRTIAEETYDLTQPGMPRAPYPVVASLQTLLDFMAKE
                     LPEARGADARKFVDDRFIRELEDNGFIASLGR"
     gene            1259..2263
                     /locus_tag="VLM90_01645"
     CDS             1259..2263
                     /locus_tag="VLM90_01645"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ11683.1"
                     /translation="MAKLSLSFVTLLWLALSAANVSAATNDGLIDAAKREGELVYYAS
                     MNLAEANAIIGEFEKRYPFIKVRLHRTGSEKLLTRVLTEYRAKKIFADIIQTVEFSMH
                     IFNRTGVLARYLPQSNAWYSKDFKEEGFWTTVYYNAYVTAYNTRLVPARQLAKSYDDL
                     LDSKWKGKLLMEGTKADWFAGMLQILGPERGLKYMRELAKQQPSPREGHELLAQLVVA
                     GEGVYDVNIPVSSVERMKERGAPIDWIALGPVPAIMVGAGIATGAPHPNAAKLFLEFV
                     LSRDGQKLMQTPGRHIARGDLANEQAAMLKDLKIVPVNPALAEKLDEYAKQMRTIFGG
                     "
     gene            2330..3103
                     /locus_tag="VLM90_01650"
     CDS             2330..3103
                     /locus_tag="VLM90_01650"
                     /inference="COORDINATES: protein motif:HMM:NF013353.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HSQ11684.1"
                     /translation="MRFMFLNHSAQHHSAELEVHIAKLLKSYASPDTTFELAYPEDLG
                     SGAVLRLLEERKALSGLHHILETPALVKKAIEAERQGFDAVIQSNTFDPGVEASRLAV
                     RIPVIGLLRASLHFAASICDRFGLIVPLETHMPHTMRMVQTYGMTPFVSGIRTVGLYD
                     TGDLSGYHDVVIERTLAVGKELVAQGAQAIIPLGGKIYPYVVTPEELEPHLGVPVINT
                     KAVGVSYAELMARNNITHSIKAYPCPTGLDADAVSQRST"
BASE COUNT          733 a          945 c          885 g          611 t
ORIGIN      
        1 gcagccgggt cgatccaaag cgcgccggga taatcgccac aacgctcatg gactcacgaa
       61 ttcacggatg caatgacaat cgattgaatg gttaatactg gcatggcgtc gccaaaaaca
      121 aaaaaccgca atggctttcc cagaaagcgc attacggaat tcgataatac gctggcaggt
      181 aaaagctgtc aacgcgaatc gcgccatcaa gcgcgcgctg acaaagaaat ttacccgcgc
      241 gaaagagtcg atcgttcggc gcttgactga tcgaggcaca gtcatgatag gaatgaggca
      301 agacctgcag aataggaaat ggctcatggc agaactaatc aagatcaaag cgggcttcgc
      361 caccatcggc caaggcgcag ggccgatgat ggtcacctgg aaagccggat tgtttcgcaa
      421 gcatggcctc gatgtcgacc ggccgccggt gatgggcagc gccaagggcg tcgtgcgcgg
      481 cttgatgtcg ggagatatcc agtttggcaa cctggcggcg ccagcgccgc tgcgagccaa
      541 tctcaaaggc gaagccgatg tggttttcct caccggcggc atcaatcagc aatttctagt
      601 cggccgcccc ggcatcaata gccgagaaga actgtccggc aagaaaatcg gcacggtcaa
      661 tgacggcggc atcggcgacg cgctggtgaa gttcgtcgtc gccaaactcg acgccgccgg
      721 cgtcaaaggc ctgcaacaag tgaccatcgg ccatggcgcc gaggcagaaa tggcagcttt
      781 gctcagcggc actgtcgatg tcgtcgtcgg cacaccgccg gagtgcatcg actccatccg
      841 ccatggctgc aagtacctga tcgattttgc cgaatacggg cttaactatg ccctgggcgg
      901 tatcgccgga cggcgcgatt acatagagaa aaatcccgag atcacccggc agttcgtcaa
      961 agcctatgtc gagggcatgc accgctatcg caccgaccga gaattcaccg tagatgtcca
     1021 ggccgactac agcggcattg cagaccgcac catcgccgaa gaaacctacg acctcaccca
     1081 acccggcatg ccgcgcgctc cctacccggt ggtcgcctca ctgcaaaccc tgctcgattt
     1141 catggccaag gaattacccg aagcccgcgg cgccgacgcc aggaaattcg tcgacgaccg
     1201 ctttatccgg gaactggaag acaacggctt catcgcttct ttagggaggt aattccagat
     1261 ggccaagctc agcttaagtt tcgttacttt gttgtggctg gcgctctcgg cagcaaacgt
     1321 cagcgccgca accaacgatg gcttgatcga cgccgccaag cgcgagggcg agctggtcta
     1381 ctacgcgtcg atgaacctcg ccgaagccaa cgcgatcatc ggcgaattcg agaagcgtta
     1441 tccattcatt aaggtaagac tgcaccgcac cggcagcgaa aagctgctga cccgagtatt
     1501 gaccgagtac cgcgctaaaa aaatcttcgc cgacatcatt caaaccgtcg agttcagcat
     1561 gcatattttt aatcgcaccg gcgtcctggc gcgctacctg ccgcaatcga acgcttggta
     1621 ttcgaaagac ttcaaggaag aaggtttttg gacgaccgtc tattacaacg cctacgtgac
     1681 cgcctacaac acccgcctgg tgccggcgcg ccagttggcg aaatcctatg acgacctgct
     1741 cgatagtaaa tggaagggca agctcttgat ggagggcacc aaggccgatt ggttcgccgg
     1801 catgttgcaa attcttggac cggagcgcgg cctcaaatac atgcgcgaac tcgccaaaca
     1861 gcagccgagc ccgcgtgaag gccatgagct cttggcgcaa ttggtcgtcg ccggcgaagg
     1921 tgtttacgat gtcaatattc ccgtgtcatc ggtggagcgc atgaaagagc gcggcgcgcc
     1981 catcgattgg attgcgctgg gcccggtgcc ggcgatcatg gtcggcgccg gcatcgcgac
     2041 tggcgcgccc caccccaacg ccgccaaatt atttttagaa ttcgtcctgt cgcgcgatgg
     2101 acagaagctc atgcagaccc ccggccgcca tatcgcccgc ggcgacctcg ccaacgagca
     2161 agcggcgatg cttaaagatc tgaaaatcgt cccagtcaat cccgcgctgg cggaaaagct
     2221 cgacgagtac gccaagcaga tgcggacaat cttcggcgga taacgatgct ttgttgtatt
     2281 ggtcctatca gtcttatagg tcctattctt agtcacaaag gagaaaatca tgcgtttcat
     2341 gtttttaaac cactcggcgc agcatcactc cgccgagctc gaggtccata tcgccaagct
     2401 gctcaaaagt tacgcctcgc ccgacaccac ttttgagctc gcctacccgg aagatctcgg
     2461 cagcggcgcc gtgttgagac tgctcgaaga gcgcaaagcg ctctccggcc tgcatcatat
     2521 tttggaaacc ccggcgctgg tgaagaaagc catcgaagcc gagcgccagg gtttcgacgc
     2581 ggtgattcag agcaatacct tcgatcccgg cgttgaggcg agccggctgg cggtgcgcat
     2641 cccggtgatc ggcctgttgc gcgcgtcgtt gcatttcgcc gccagcattt gcgaccgctt
     2701 cgggctcatc gtgccgttgg aaacccatat gccgcacacc atgcgcatgg tgcagaccta
     2761 tggcatgacg ccgttcgtca gcggtatccg caccgtcggc ctctacgaca ccggcgatct
     2821 gtcgggttat cacgatgtcg tcatcgaacg cactttggcg gtgggcaaag agctggtagc
     2881 ccaaggcgct caagcgatca ttcctttggg cggcaagatc tacccctacg tggtcacgcc
     2941 ggaagagttg gaaccccatc tcggcgtgcc ggtgatcaac accaaagcgg tgggcgttag
     3001 ctacgcggaa ttaatggcgc gcaacaatat tacgcacagc atcaaagcct atccctgccc
     3061 caccggtctc gatgccgatg cggtatccca gcgttcgacc taaccacttc gtcagtgagt
     3121 tgcaatggct tcaggcatca ctatgagtta aattgacatt cacctgagga gacc
//
LOCUS       DATIRS010000134         3761 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_600440, whole genome shotgun sequence.
ACCESSION   DATIRS010000134 DATIRS010000000
VERSION     DATIRS010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3761)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3761)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3761
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_600440"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(414..1439)
                     /locus_tag="VLM90_01655"
     CDS             complement(414..1439)
                     /locus_tag="VLM90_01655"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ11685.1"
                     /translation="MKTIALAFLVLVLSTGRLSAQGSFFEGKTIRIIVGLPAGDAYDI
                     YARMLATYMGKYIPGNPTLMVQNMPGASSMITANYVYNVAKPDGLTFGSTLPSLYFDQ
                     LLGRKEVKFDWRKFTWLGSFESSNNLIYMRADTPYKTIHDVTKATEPPKCGSTGTGSP
                     SYFLVKLLNEAIGTKFTVVTGYQGGQEIDLAVERGEAVCRGFTVTTFFAREPFHTWRK
                     RGFVRVLVQTGRKRDPRLADVPTVNELLDEYKVSDGMRRLSGLALASGDFGRPIVATP
                     GIPAERAKILREAFAKTLKDADLLAEAKKKNLEIDPTSGEDLEKLANDVMSANKDAVD
                     RLHKLLQ"
     gene            1539..2357
                     /locus_tag="VLM90_01660"
     CDS             1539..2357
                     /locus_tag="VLM90_01660"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HSQ11686.1"
                     /translation="MTEKFETLLLTRDGAITTITFNRPEKRNAMSPQLHREMYQVLTE
                     LRYDKQTKVVVLTGAGDNFCAGQDLKQYGLEMESQPEWLKDEIREKVRKWRTELLRAL
                     PQPIIARIAGWCLGGALTVTVGCDVAIAADDAKFGLPEVNFGHFPAGETTPILANYLQ
                     SKHGLYYALSGKMMSAHEAERIGLISRVVPRAELDNEVNEFANCLAEKSSRALRAVKE
                     AWYTSMKASPEVGFTISNFISERIIREQGGRPGLEQFVEKKLRPVSGTMKLEKE"
     gene            2429..2938
                     /locus_tag="VLM90_01665"
     CDS             2429..2938
                     /locus_tag="VLM90_01665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11687.1"
                     /translation="MAHAKTFRTVGESLESLGVRTFTLEKAGQGVTVRTSDPLDPSKL
                     AKANLSEKDWEIEASSRRQAKLFREDGVLRYDADYISWLETQGQRKRHNRFSGHASST
                     KSLAQLMRSLGRHLDRVEPHKFRISWGDAEVHLDYQLPDGSRIQEVLNIAKLDELTMR
                     SRHRRSARK"
     gene            3051..3731
                     /locus_tag="VLM90_01670"
     CDS             3051..3731
                     /locus_tag="VLM90_01670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11688.1"
                     /translation="MRSVKTRLFFLLIAWQILLPAPIFADPFPPLDQKRPPLVLKAHG
                     IFWAGGQIVNRTQSGSQNVGDLKNVPYNQQQSLVGQAYVEYFIPEKLRNGKNTLPIVM
                     VPGGALIGVHFLTTPDGREGWAHYFLRRGFPVYIVDVPGRGRAGFMPDPFNDVKAGVA
                     PPNNQPAIRGWDSSAWLEWNTGPLPAPTPALGPNDPNCIGNDARDPKNPPVYCNGNLM
                     PALDSEGY"
BASE COUNT          828 a         1056 c         1076 g          801 t
ORIGIN      
        1 aacgcccgcg ggcgcttatt tggcttctgg cgcttgatcg gtgagatcgg cagcttggtt
       61 agtccagcga tgttcggatt tgtcgccgat catgcatcct acgcggcggc gtttagcatg
      121 accgcttttt tcgccttgat cactgcggcg cattgacctt ttccgtgcaa gagaccgtcg
      181 ggagggattg gggatgactg ggacgaggtt tgtgaatggc gtttggccat acagaccggt
      241 ggtgaatgtt gatgagttcc gtcatgccgg cgcaggccgg catccatctt cggcttcgct
      301 tcaagttcaa aaaaagcttg gattccgcct tcgctggaat ggcgaaaaag agtgagccaa
      361 ctgctcgtcg acgcaagcga agtgcctcag cccataaccg aaggtcgttc agtttactgc
      421 aaaagcttgt gcagcctatc gacggcatct ttgtttgccg acataacatc atttgccaat
      481 ttttcgagat cctcgccgct ggtcgggtcg atctcgaggt tcttcttttt cgcttcggcc
      541 agtagatcgg catccttcag agtcttggcg aaggcctcgc gtaaaatctt cgcgcgctcg
      601 gcggggatgc cgggagtggc gacaataggc cggccgaaat cgccggacgc cagcgctagg
      661 ccggacaatc ggcgcattcc atccgaaact ttgtactcat cgagcaactc attgaccgtg
      721 ggcacgtccg ccaagcgcgg atcgcgtttc cggccggttt gaactagcac gcggacaaag
      781 ccgcgcttgc gccaggtatg aaacggctcg cgggcgaaaa acgtcgtcac ggtaaagccg
      841 cggcacaccg cttcgccgcg ctcgactgcc agatcaattt cctgaccgcc ctgatagccg
      901 gtaaccacgg tgaatttagt gccgatcgct tcattcagca acttgacgag aaaataggat
      961 ggcgagccgg tgccggtgga gccgcatttg ggcggctccg tggctttcgt cacatcgtgg
     1021 atggttttgt acggcgtatc ggcgcgcatg tagatcaagt tattcgaact ctcaaagctg
     1081 cccaaccagg taaacttgcg ccaatcgaac ttcacttcct tacgtccgag caattgatca
     1141 aagtagagtg acggtaaggt cgatccgaag gtcaggccat cgggcttggc gacgttgtaa
     1201 acataattcg cggtaatcat gctcgatgct ccaggcatgt tttgcaccat cagcgtgggg
     1261 ttgccgggga tatacttgcc catgtaggtt gccaacatgc gggcgtagat atcgtaggcg
     1321 tcgccggccg gcagaccaac gattatgcgg atcgtcttgc cctcgaaaaa agagccttgc
     1381 gctgacagcc tgccagtgga taaaactaat accaggaacg cgagagcgat ggttttcatg
     1441 gcacagctcc tcttgaccgt agacaaaggc gaatggagcc tagccgagtg cgctcgtctg
     1501 tgtcaaatta attccgacca tctaacagga gaaagatcat gaccgagaaa ttcgaaacct
     1561 tattgctgac ccgagatggc gccatcacga cgattacctt taatcgtccg gaaaaacgca
     1621 acgccatgag cccgcagttg catcgcgaga tgtaccaggt cttgaccgaa ctacgttacg
     1681 acaagcagac caaggtcgtg gttctcaccg gcgcggggga taatttctgt gccggtcaag
     1741 atttgaaaca gtatggcttg gagatggagt cccagcccga gtggctaaag gacgaaattc
     1801 gcgagaaggt ccgcaagtgg cgcactgagc tcctgcgcgc cttgccgcaa ccgatcatag
     1861 cgcgcatcgc cggctggtgt ctgggcggtg ccctcactgt caccgtgggc tgtgacgtgg
     1921 cgatcgccgc cgatgacgcc aagttcggcc tgccggaggt caacttcggc cattttcccg
     1981 ccggcgaaac gacaccgatc ttggccaact atttacaatc caagcatggc ctctattacg
     2041 ccttgtccgg caagatgatg tcggctcacg aagccgaacg tattggtttg atttcgcggg
     2101 tggtgccgcg cgccgaactc gataatgaag tgaacgagtt tgccaattgc ctcgccgaaa
     2161 agagctcgcg ggcgctaaga gccgttaaag aggcatggta cacgagtatg aaagcgtcac
     2221 cggaggtcgg cttcacgatc tccaacttta tttccgagcg gatcattcgt gaacagggcg
     2281 ggcggcccgg gctggagcag ttcgtcgaga aaaaactccg tccggtgtcg gggacgatga
     2341 aactggagaa ggaatgagcc aaacaggaat ctaccgggga aaccgaaagt gtcttcaaac
     2401 cgcagcataa tcggctataa ttcttgaaat ggcacatgca aaaaccttca gaaccgtcgg
     2461 tgagtcgctc gaatccctcg gcgtgcgcac ctttacttta gaaaaggccg ggcaaggcgt
     2521 caccgttcgt accagcgatc cgctcgaccc gtcgaagttg gctaaggcga atctttcgga
     2581 aaaggattgg gaaatcgagg ccagctcgcg gcggcaggct aaactgtttc gcgaggatgg
     2641 cgtgctgcgc tacgacgccg actatatttc ctggctcgaa acccaaggcc agcgcaaacg
     2701 gcacaatcga ttttccggcc acgccagcag cacgaagagc ctggctcagc ttatgcgctc
     2761 tctcggccgc catctcgatc gcgtcgaacc ccacaagttt cggatctcct ggggcgatgc
     2821 agaagtccat ctcgattacc aattgcctga cggcagccgc attcaggaag tcctcaacat
     2881 cgcaaaactc gacgaactga cgatgcgcag ccgccaccgc cggtcggcgc gcaagtaata
     2941 ccgccgccac tttcgccgaa ttgtcgattg acttcgcgcg cgcttcaaac gtacaaggaa
     3001 ccgtaagcca ctacggctga cgcggtagaa acttgatgga ggcgctgctt atgcgatcgg
     3061 taaaaactcg actgtttttt ttgcttatcg cttggcaaat tctcttgcca gcgcctatct
     3121 ttgccgatcc ctttccaccg ctagatcaaa aacgtccgcc gctggtgctc aaagcccatg
     3181 gcatcttctg ggccggcggc cagatcgtca atcgaacaca atcgggcagc cagaacgtcg
     3241 gcgatctcaa gaacgttcct tacaaccaac agcagtcgct cgtcggccaa gcctatgtcg
     3301 aatatttcat tccggaaaaa ttacgtaacg gcaagaacac cttgccgatc gtcatggtgc
     3361 cgggcggcgc tctgatcggt gtgcattttc tcactacgcc ggatgggcgc gaagggtggg
     3421 cgcattattt tctgcgccgc ggctttccgg tttatatcgt cgatgtgccg gggcgcggtc
     3481 gcgccggctt catgccggac ccgttcaacg acgtcaaagc cggcgtcgcg ccgccgaata
     3541 accagccggc gatcagaggt tgggacagct cggcatggtt ggaatggaac accgggccgt
     3601 taccggcgcc gacgccggcg cttgggccca acgatcccaa ctgcatcggt aacgatgccc
     3661 gcgatcccaa gaatccgccg gtctattgca acggcaactt gatgccggcg ttggatagtg
     3721 aaggctacta gcattggctc ggcgccttgg tgcccgaggg g
//
LOCUS       DATIRS010000135         2088 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_108469, whole genome shotgun sequence.
ACCESSION   DATIRS010000135 DATIRS010000000
VERSION     DATIRS010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2088
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108469"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            119..1759
                     /locus_tag="VLM90_01675"
     CDS             119..1759
                     /locus_tag="VLM90_01675"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HSQ11689.1"
                     /translation="MATSYHEKLAKIRMAFPQPVSDRVHDSYFVHSIMRALDMVDGLK
                     SEVPVLGPREPLDYGAAQMARLAESSSTVEDVTANLVDYFKGLTIWGHPRTQINVVPP
                     PSISSLIATVLTGLYNPNLAWDEYSHKVALAEVEAVAMSAGLMGYDPAHASGVFTFGG
                     TATTLYGVKVGLEKAVPGAMQNGVGAGAVMFASDCSHYCRYNIAGWLGLGAKNLITIP
                     TGSRNAIKIDVLRDHARTALQSGWPIAAFIATMGTTDAFGIDDLEAMVNLRDELVSEF
                     SLPYRPHVHADAVIGWAWQAFADYDFEHNPLEFRPRTVRALAGACQRIRHLHLADSIG
                     IDFHKTGFTPYISSLVLFKERDDLRLLMRSQEQMPYLYQFGEHRPGMFTLETSRSGMG
                     ALAALANLKLLGKEGLRVMLGHIVEMTQLLREHLEGHAATAVLNRDNFGTVTLFRAYP
                     DGVDTFAIKDQEMDDEKFRDTLLRHNAYNRKIFDYVHGEAMAGRGVVISLTDSYRETS
                     YGEPVAALKSFILSPFTDEENIETVVDKVLEARGKVKV"
     gene            1771..>2088
                     /locus_tag="VLM90_01680"
     CDS             1771..>2088
                     /locus_tag="VLM90_01680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11690.1"
                     /translation="MPTQALVVSLHIAAQAAAPMQSVATVIAVAGRGLEGDRYFEQTG
                     TYSTHTGSGREITLIESEAVAALARKYDIQLSPGLARRNIVTRAVALNHLVGKTFVIG
                     AVVL"
BASE COUNT          417 a          604 c          618 g          449 t
ORIGIN      
        1 ggtttgtttc ggatttcgtg cttcgagctt aggttttatt tcgttcgatt cttgtcgcgg
       61 tgaacattat tgaagctgta ttgtcgaaaa tttaatagtc aggatccggg ggaatccgat
      121 ggcgacatct taccatgaaa aactagcaaa gattcgcatg gcatttcccc agccggtgtc
      181 cgaccgggtg catgattctt atttcgttca tagtatcatg cgcgctttgg acatggtcga
      241 cggcctcaag agcgaagtgc cggtgctcgg gccgcgcgag ccattggatt acggcgcggc
      301 gcaaatggcg cgcttagcgg aatcgtcgtc gacggtggaa gacgtaaccg cgaacctggt
      361 tgattatttc aaaggcctga caatttgggg acatccgcgc acgcagatca acgtcgtgcc
      421 gccgccgtcg atctcgtcgc tgatcgcgac ggtcctgacc ggactctaca atcccaacct
      481 ggcgtgggat gagtatagcc acaaagtcgc tcttgccgag gtcgaagcgg tggcgatgag
      541 cgcgggactg atgggctacg atccggcgca cgcttccggt gtcttcacct tcggcggcac
      601 ggcgacgacc ctctacggcg tcaaggtcgg tctggaaaag gcggtgcccg gcgccatgca
      661 aaacggcgtc ggcgcgggtg cggtcatgtt tgccagcgat tgcagccact actgccgtta
      721 caacatcgcc ggctggctcg gtctcggcgc gaaaaatctt attacgatcc cgaccgggtc
      781 gcgcaacgct ataaagatcg atgtcctgcg cgatcacgcg cgcacggcat tgcaaagcgg
      841 ctggcccatc gccgccttca tcgcgaccat ggggacgacc gatgcgtttg gcatcgacga
      901 tctcgaagcc atggtcaatt tgcgcgacga gctggtcagc gaattcagtc tgccttaccg
      961 tccgcacgtc cacgccgacg cggttatcgg ctgggcatgg caagccttcg ccgactacga
     1021 tttcgagcat aacccgttgg agtttcgtcc acgcactgtg cgcgctctgg cgggcgcctg
     1081 tcagcgcatt cgccatctgc atctggccga ctccatcggc atcgactttc acaagaccgg
     1141 cttcacgccg tatatttcga gtctggtgtt gttcaaagag cgcgacgatc tgcgcctgtt
     1201 gatgcgcagc caagagcaga tgccttatct ttatcagttc ggcgagcacc gtcccggcat
     1261 gttcacgctt gagacctcgc gcagcggcat gggcgcgctg gcggccttgg ccaatttaaa
     1321 actgctcggc aaggagggtc tgcgggtcat gctcggccat atcgtcgaga tgacccagct
     1381 gctgcgcgag catctcgaag gccatgccgc caccgcggtg ctcaaccgcg acaacttcgg
     1441 cacggtaact ctgttccgcg cctaccctga cggtgtcgat accttcgcga ttaaagacca
     1501 ggagatggat gacgaaaagt ttcgcgatac cctgctgcgc cacaacgctt ataaccgcaa
     1561 gattttcgac tatgttcacg gcgaagcgat ggccggccgc ggcgtggtga tctcgctcac
     1621 cgactcctac cgggaaacca gttacggcga gccggtggcc gcgctgaaat cgtttattct
     1681 ctcaccgttc accgacgagg agaatataga aacggtggtc gacaaagtct tggaagcgcg
     1741 cggcaaggtc aaggtctgat cgcgaaaaca atgccgacgc aagctctggt tgtttcgttg
     1801 cacatcgccg cgcaggcggc ggcgccaatg cagagcgttg caaccgtcat tgcggtcgct
     1861 ggacgaggcc ttgaagggga ccgctacttc gaacagaccg gcacctattc gacccataca
     1921 ggctcgggac gtgaaatcac attgatcgag agtgaagccg ttgcagcgct ggcgcgcaag
     1981 tacgatatcc aattgtcgcc cggactggcg cgacgcaata tcgtcactcg cgctgttgcg
     2041 ctcaatcatc tggttgggaa aacctttgtc atcggtgccg tggtgctg
//
LOCUS       DATIRS010000136         3845 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_600510, whole genome shotgun sequence.
ACCESSION   DATIRS010000136 DATIRS010000000
VERSION     DATIRS010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3845)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3845)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3845
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_600510"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..923)
                     /locus_tag="VLM90_01685"
     CDS             complement(<1..923)
                     /locus_tag="VLM90_01685"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSQ11691.1"
                     /translation="MEFSEFVHTGPETLAGRFLRRFWQPVACSHELSAGQALPLRILS
                     EDFTLYRGAGGTAHLVGNRCAHRGTQLSAGWVEEDCIRCFYHGWKYDGAGQCVEQPAE
                     GESFAAKVRIASYPVKEYLGLVFAYLGAGEAPSLPRYPRFESPEISLDVAGLKRICNY
                     FNNVDNSLDNAHLRFVHRRHRDAAEDHVVLGDPIISVEESDWGIRRYVKYPDGKDLTF
                     FFGMPNINFINGQVVDPVIKRADVMVFKVPVDDENHIHFEVRAIALSGAQGRAWIEER
                     RALRAKVEEERPELVRAILAGKLRLSDIDPQR"
     gene            complement(998..1954)
                     /locus_tag="VLM90_01690"
     CDS             complement(998..1954)
                     /locus_tag="VLM90_01690"
                     /inference="COORDINATES: protein motif:HMM:NF024376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhnD/SsuA/transferrin family substrate-binding
                     protein"
                     /protein_id="HSQ11692.1"
                     /translation="MALKLTMTCAEYDRSRPLIDGTVKAPDIDLAIHVNSDDRSRQRD
                     IRDGKFDIGEFFTGIYIADLEQRTLGLTAIPIFVKRMFRHSYIYVNKRSGIRTPEDLH
                     GKRVGLQTWFTTTALWARGILADDYGVDLSKICWVANWNEKIGNWQPPSWLQLEIAPP
                     GAKLHDLLIAGKIDAGITTETWAPFGHPDVDFLLPNYAQEERAYYRKTGFFPIQHILV
                     IKNEVLEKHPWVAMSMFNAWQAAKLECYRWLERQRVHMTGLWYRSLWEEERAAAGADP
                     YLWGFKQTRAEVGRMLDYALQQGLVTQKFQPEEMFHPSTLET"
     gene            complement(2123..3091)
                     /locus_tag="VLM90_01695"
     CDS             complement(2123..3091)
                     /locus_tag="VLM90_01695"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ11693.1"
                     /translation="MRIVAILLLLLIGSGVSRAEVFKVAMPSTTQAVLAFTIARDKGY
                     YRTEGLDVELILMSAPTASRALLSGDVSVATVGGAGLPPVLRGSPMKFLFTTYNRAMF
                     WLYAKAEIRDVKALKGKRVGVSGIGSGPDSLLREVLRLNGLDANRDVTILSLGVMPTI
                     YAGLQSGMVDGAMLSPPVTFKAEEAGFRELVAFPKQDLVEPQGAILIRDALLQSDPAQ
                     VERFVRGSYKGFLYLRDNRAGSIPIVARYLQVSDVQAAKAYDQVVRPALTQDGTLSPD
                     LQAKAVEHVLKRLDLKDAPPLAKVFDFTLTRKVMAELQSKGWRPVP"
     gene            complement(3118..>3845)
                     /locus_tag="VLM90_01700"
     CDS             complement(3118..>3845)
                     /locus_tag="VLM90_01700"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ11694.1"
                     /translation="SSGDLIARGAAFEPSPRAVAEQSAIVALAVVDDAQVDDVLTGAE
                     GVFAGADPGTIVVVHSTVLPESIKRWAEIAKAKDVHVIDAPVSGGEAGARQKSLCYMV
                     GGDAALLERCRELFATSAQEIIHMGALGSGAAAKLIVQVATCVNMLAASEAELMAAQC
                     GLDFGAMQRVLKNSSGQSFVVDNWLDRFKLTADPLAIRRRRTEVFQKSLMPALELARQ
                     LGIALDGATLAERLMPRIMGLEK"
BASE COUNT          785 a         1210 c         1062 g          788 t
ORIGIN      
        1 cgctgaggat cgatatcgct cagccgcagt tttccagcga gaatcgcccg caccagttcc
       61 ggtcgctctt cttccacctt ggcgcgcagc gcgcgccgct cttcgatcca cgcccggccc
      121 tgcgcgcccg aaagtgcgat ggcgcgtact tcgaagtgaa tatggttttc atcatccacc
      181 gggactttga aaaccatcac gtcagcccgc ttgatcaccg gatcgaccac ctggccgttg
      241 ataaaattaa tgttgggcat gccgaagaaa aaggtcagat ccttgccgtc ggggtattta
      301 acgtagcgcc ggatgcccca gtcggattcc tccacggaga taatcggatc gccaagcacg
      361 acatggtcct cggctgcgtc gcgatggcgc cggtgcacga agcgcaggtg cgcgttgtcg
      421 agggaattgt cgacgttgtt gaagtagttg cagattcgtt tgagaccggc gacgtcgagg
      481 gatatctcgg gagattcgaa cctgggataa cgcggcaacg atggcgcctc gcccgcgccc
      541 agataagcga agaccaggcc gagatattcc ttgaccggat aacttgcaat gcgcaccttc
      601 gccgcaaagc tttcaccctc tgccggctgc tcgacgcatt gtcccgcgcc atcgtatttc
      661 caaccgtggt aaaaacaacg aatgcaatct tcttcgaccc agcccgccga cagctgggta
      721 ccgcgatggg cgcagcggtt gccgaccaga tgcgccgtgc cgccggcgcc ccgatagagg
      781 gtaaaatcct cgctcaagat gcgaagcggc aacgcctgac cggcgctaag ctcatgggag
      841 caggcaaccg gttgccagaa tcggcgcaaa aaacgcccgg ctagggtttc cggtccggtg
      901 tgaacaaatt cgctaaactc catctgtaac ctcgacaatc tgatcttcgg ggcggcggtg
      961 ggacgcctta cccttcaccc tttgcccctt accgttttta tgtctccagc gtgctcgggt
     1021 gaaacatctc ctccggctgg aacttctgag tcaccaatcc ctgttgcaaa gcataatcaa
     1081 gcatcctacc cacttccgca cgagtctgct taaatcccca taggtatgga tcggcgccgg
     1141 cggcggcgcg ctcctcttcc cagagcgagc gataccacaa gccggtcatg tgaactcttt
     1201 gccgttcgag ccagcgataa cactcaagct tcgccgcttg ccaggcgttg aacatgctca
     1261 tggccaccca gggatgtttt tccagcacct cgttcttgat gacgagaata tgctggatcg
     1321 gaaagaagcc ggtcttgcga tagtaagcgc gctcctcttg agcatagttg ggaagcaaaa
     1381 agtcgacatc cggatggccg aagggcgccc aagtttcggt ggtgatgccg gcgtcgattt
     1441 ttcctgcgat cagcaagtca tgaagcttgg caccgggcgg cgcaatctca agttgtagcc
     1501 aggacggtgg ttgccagttg ccgatttttt cattccagtt ggccacccag caaatcttgc
     1561 tcagatcgac gccatagtcg tccgccagga taccgcgcgc ccatagagcc gtggtggtga
     1621 accaagtctg caggccgaca cgcttgccat ggagatcctc gggcgtgcga atcccggagc
     1681 gtttgttgac gtagatatac gagtggcgaa acatccgctt gacgaagatc gggatcgccg
     1741 tcagtccgag tgtccgctgc tccaggtcgg cgatataaat gccggtgaaa aactcaccaa
     1801 tgtcgaactt gccatcgcga atatcgcgct gccggctgcg gtcgtcggaa ttgacgtgaa
     1861 tcgccaaatc aatgtcaggc gccttcacag tgccgtcgat cagcggccgg ctgcgatcgt
     1921 actccgcgca agtcatggta agtttcaaag ccatttaaat tctatttctc ggaattactc
     1981 tcgccaaggc gccaagttcg gaatcgttgt catttcgacc cttggaagaa atctttctta
     2041 gatccctcgt gcccctcggg atgacgggca tcgcccgtca cctttgcgcc ttggcgcctt
     2101 tgcgggagat actctcttaa cgttacggca caggtctcca ccctttgctc tgcaattcag
     2161 ccatcacctt gcgcgtcagc gtgaagtcga agaccttcgc caatggcggc gcgtccttga
     2221 gatcgagccg cttgagcaca tgctccaccg ctttggcctg caagtccggg ctgagtgtgc
     2281 catcttgagt cagcgccggc cgcaccacct gatcgtaggc tttcgccgcc tgaacgtcgc
     2341 tcacctgcaa gtagcgcgcg acgattggaa tcgacccggc gcggttatct ctcagataga
     2401 gaaatccctt gtaactgccg cggacgaatc gttcgacctg ggccggatcg gattgcaata
     2461 gcgcatcgcg aattaggatg gcgccttgcg gctcgaccag atcttgtttt ggaaacgcca
     2521 ccagctcgcg aaagcccgcc tcttctgctt tgaaggtcac cggcggcgag agcatcgcgc
     2581 catctaccat gccgctttgc agtccggcat aaatcgtcgg catgacgccg agactaagaa
     2641 tcgtcacatc gcgattggca tcgagaccat tgagccgcag aacttcgcgc agcaaggagt
     2701 ccggcccgct gccgattccg gaaacgccga ctcgcttgcc cttgagcgcc ttgacgtcgc
     2761 ggatctccgc tttcgcgtag agccaaaaca tcgcccggtt gtaagtcgtg aacaaaaatt
     2821 tcatcggcga cccgcgcagc accggcggca agccagcgcc gccgacggtg gccacgctga
     2881 catcgccgct caacagggcc cggctagccg tgggcgcact catgagaatg agctcgacat
     2941 ccagcccctc ggtgcggtaa tagcccttgt cgcgggcgat ggtgaaggcc agcaccgctt
     3001 gggtcgtgct cggcatcgcc actttgaaaa cttcggcgcg gctgacgccc gagcctatca
     3061 gcaacagtaa aagtatcgcg actattctca cggtgtctcc catcgaacaa ttacgggcta
     3121 tttttccagt cccatgattc tcggcatcaa gcgctcggcc aaggtcgcgc cgtctagagc
     3181 aatccccagt tggcgagcca actccagggc cggcatcaag cttttctgaa acacctcagt
     3241 gcgccggcgc cggatcgcca gcggatccgc cgtcagcttg aaacggtcga gccaattatc
     3301 gacgacaaaa ctttgtcccg aactgttttt cagcacgcgc tgcatggcgc caaagtcgag
     3361 accgcactga gcggccatca gttccgcttc gctggccgcg agcatattga cacaggttgc
     3421 gacttggacg atcagcttcg ccgccgcgcc actgcccaac gcgcccatgt gaatgatctc
     3481 ctgcgcggat gtggcaaaca gttcccggca gcgttccaac aatgcggcgt cgccgccgac
     3541 catgtaacaa agcgacttct gccgagcgcc ggcctcgccg ccgctaaccg gcgcgtcgat
     3601 gacatggacg tccttcgctt tggcaatctc ggcccaacgc tttatcgatt caggcaacac
     3661 cgtgctgtga accacgacga tcgttcctgg atcggcgccg gcgaacacgc cctcagcacc
     3721 ggtcagcaca tcgtccacct gagcgtcgtc caccaccgcc agcgcgacga tcgccgactg
     3781 ttccgccacg gcgcgcggcg atggctcgaa agctgcgcct cgggcgatca agtcgcccga
     3841 gctct
//
LOCUS       DATIRS010000137         2172 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_796831, whole genome shotgun sequence.
ACCESSION   DATIRS010000137 DATIRS010000000
VERSION     DATIRS010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2172)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2172)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2172
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_796831"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..858
                     /locus_tag="VLM90_01705"
     CDS             <1..858
                     /locus_tag="VLM90_01705"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ11695.1"
                     /translation="GNPSFIVQNMPGAGHVVAVNHLYTGVKPDGLTIIGSVIPSLYLN
                     QLVGRSEIQFDWSKFTWIGSPARGNSQMYMRADSPYKTIEEVRTAKEPPKCGATGVTG
                     PDSYFPKLLQETVGAKFQIVTGYPGGTDIDLGVERGEIHCRAFTIEAFFGREPYHTWR
                     KTNFVHHMFQSGAKRDARLPNTPTIFEIMDRYKTPEAGRRLATVLLGADDMGRPMFGP
                     PAMPADRLKTLRDAFVKTMADEQFRAEVKKRNYEFDPVVGEELERLAKEIIGQPPEVI
                     ERLKKVLGN"
     gene            complement(1332..1922)
                     /locus_tag="VLM90_01710"
     CDS             complement(1332..1922)
                     /locus_tag="VLM90_01710"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSQ11696.1"
                     /translation="MLISSPRFRTAPFVLILAASLLAGCGGGKAPAAGGAGGGKAGRG
                     GGAAPVLVATAQRKVVPLEIQAIGAVEPIRTTAVRSQVTGTLLKIAFQEGQDVKEGDL
                     LFEIDPRPFHNALKTAEADLQKARLQLDTARAQVERYRTLTNEQMVSKEQFEKITDAA
                     RSLEAEVLADESRVANAKLQLEYSSIECPSRRRAGL"
BASE COUNT          448 a          650 c          649 g          425 t
ORIGIN      
        1 gggaatccca gcttcatcgt ccagaacatg cccggcgccg gccatgtagt cgcggtcaat
       61 catctgtaca ccggggtcaa accggacggc ctgacgatca tcggctcggt gatcccgtca
      121 ctttacttga atcagctcgt cggtagatcc gaaattcaat tcgattggtc taaatttacc
      181 tggatcggct cgccggcgcg aggcaacagc cagatgtaca tgcgcgccga cagtccttac
      241 aaaaccatcg aagaagtccg caccgccaag gagccgccca aatgcggcgc caccggcgtc
      301 accgggccag actcctactt ccccaaactg ctgcaagaaa cggtcggcgc caagtttcaa
      361 atcgtcaccg gctatcccgg cggcaccgac atcgatctcg gcgtcgagcg cggcgaaatc
      421 cactgccggg cgtttaccat cgaagcattc ttcggccgcg aaccctatca tacctggcgc
      481 aagaccaact ttgtccatca tatgtttcag agcggcgcca aacgcgacgc gcgcctgccc
      541 aatacgccga caatttttga gatcatggat cgctataaaa ctcccgaggc cgggcgacgg
      601 ttggcgaccg tgctcctcgg cgccgacgac atgggccggc ccatgttcgg tccgccggca
      661 atgccggcgg accgtttgaa gaccctgcgc gacgccttcg tcaaaaccat ggccgatgaa
      721 cagttccggg ccgaggtgaa gaagcgcaat tatgaattcg atcctgttgt cggcgaagag
      781 ctggaaagac tcgccaagga aatcatcggc cagccgccgg aggttatcga gcggttaaag
      841 aaagtcttag gcaactgagc gcgatagctt cacttgaccg aagcgacaaa aagcgtacaa
      901 gtccacggaa gtcaatcagg aggtaaatat gatcaggtcg aattggtttg ctgtactctg
      961 cgttctgtta ttcagccagt tatttcccag tctaacctac ggccaagcgc cattctacca
     1021 aggcaagacg atcacaattg tgcaaggccg cgacccgggc ggcaccggcg atctgcgggt
     1081 gcgggccttg gttccgttcc tgcaaaaata tattcccggc agtccgacga ttattatgga
     1141 attcatgcct ggcggcggca gccgcaaggc ggccaatcat gtgttccgct cgtcccgtcc
     1201 cgacggcctg accatcggta atttaagctc tggcatggtc tccctcgcca tcctcggcga
     1261 gtcgggcgtg ctctacgaca tcgacaagtt catctacctg ggctcgccct acagcagtta
     1321 tcattcggtg ttcataaccc ggcgcgacgc cggctgggac actctattga ggagtattcg
     1381 agctggagct tggcgttggc gacgcgcgac tcgtcggcga gaacctcggc ctcgaggctg
     1441 cgggcggcat cggtgatctt ttcgaactgc tccttggaca ccatttgttc attcgtgagg
     1501 gtgcggtagc gctcgacctg ggcccgggcg gtgtcgagtt gcagcctggc cttttgcagg
     1561 tcggcttcgg cggtcttgag tgcgttgtga aagggccgcg ggtcgatttc gaaaagcaag
     1621 tcaccctcct tgacgtcctg gccttcctga aacgcgattt tgagcagggt gccggtgacc
     1681 tgggagcgca ccgcggtggt gcggatgggc tccaccgcgc cgatggcctg gatttcgaga
     1741 ggcacaacct tgcgttgggc cgttgcgacg agcaccggcg ccgcaccccc gcctcggccg
     1801 gccttgccac ccccggcgcc ccccgcggcg ggagccttgc cccctccgca gccggcgagc
     1861 agcgatgcgg caaggattag gacaaacggg gcggtgcgaa aacgcgggct tgaaatcaac
     1921 atgatgcgat caaaggggag gtgcggcgct cagaggacgg gaaaggtcgg gtgctggaat
     1981 cgaggagagt tcggcggtcg atcggacctt tgtcaaaggt gtcgagcagg acgaagcaaa
     2041 accggaaaag ttggcggtcg cgtggccccg tcatagccca aagcttttcc ttgctaggga
     2101 agggcgcgga gatttccctc ggggccattt ttcctcaatg aaagtcctcg tagccgacaa
     2161 gatctcaccc aa
//
LOCUS       DATIRS010000138         1702 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_501860, whole genome shotgun sequence.
ACCESSION   DATIRS010000138 DATIRS010000000
VERSION     DATIRS010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1702
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_501860"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            43..774
                     /locus_tag="VLM90_01715"
     CDS             43..774
                     /locus_tag="VLM90_01715"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HSQ11697.1"
                     /translation="MKFSVANNPLPANFRRSRLAVLAIAFLAALGLSACFTTASPPSR
                     RAPQDYSQTRTQNYASRGSDGNDSERLRRVMVPLIQAMDQPCRLDQTKIGIINQNEIN
                     AANAGNCQFYVTTGLLGRASDDQMRGVLAHELAHQDLGHVAKAQVLGATINALSVGLQ
                     QLFPIAGAVAPVAGELVARSYGRKEEFSADTHAVDILRRAGYPKEVMVDSLAWIRRIS
                     GDKGGGFLSTHPGLDDRIATIQRLR"
     gene            960..1301
                     /locus_tag="VLM90_01720"
     CDS             960..1301
                     /locus_tag="VLM90_01720"
                     /inference="COORDINATES: protein motif:HMM:NF024879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper domain-containing protein"
                     /protein_id="HSQ11698.1"
                     /translation="MKNTMKSISIFALVMTLAAGCAGGAITTREKGIGIGALGGATAG
                     GLIGTAVRKPLAGAMIGAVLGAGAGGLIGDGLQGRDIQGNEQDQAIQRNEQEILRQRR
                     ELEELRQRREY"
     gene            1365..>1702
                     /locus_tag="VLM90_01725"
     CDS             1365..>1702
                     /locus_tag="VLM90_01725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11699.1"
                     /translation="MLILSEKVGVGRKKALRAMFVLLLLLVSVAPQAWSLSASLSPGD
                     HTATLQFAGRERSAIVHVPRRAAERQLLPVVLNFHGGGGHGANQQEYSLLDAVAESES
                     FITVYPNGTGR"
BASE COUNT          343 a          491 c          514 g          354 t
ORIGIN      
        1 gtcctaagga taggcgtgaa agtttggcta caagtggaga caatgaaatt ttcagttgcc
       61 aataacccgt tgccagcaaa cttccgccgc tcgagattgg ctgtgctggc gattgctttc
      121 ttggctgcgt tgggcctctc agcatgtttc accaccgcgt cgccgccaag ccggcgcgcg
      181 ccgcaggact attcgcaaac acggacgcaa aattatgcct ctcgtggctc ggatggcaat
      241 gactccgagc gtctgcgccg ggtcatggtg cctttgattc aggccatgga tcagccttgc
      301 cggctcgatc aaaccaagat cggcatcatc aatcagaacg agatcaacgc cgccaacgcc
      361 ggcaactgtc agttttacgt caccacaggt ttgttggggc gcgcctcgga tgaccagatg
      421 cgcggcgttc tcgcccatga gctggcgcac caagatttgg gccatgtcgc caaggcgcag
      481 gttcttggcg cgacgatcaa tgccctgagc gtgggtttgc agcagttatt tcccatcgct
      541 ggcgccgtgg cgcccgtcgc cggcgaactg gtagcgcgca gttatgggcg caaagaagaa
      601 ttcagcgccg acacgcatgc tgtcgatatt ctgcgccgcg cgggctatcc caaagaggtt
      661 atggtcgact ccctcgcctg gattcgccgt atatccggcg acaaaggagg cggctttctc
      721 tccacacatc cggggctcga cgaccggatc gcgacgatcc agcggctgcg ttaacactag
      781 acttacgagc tttcagtgta attccgcaca tcccgttggt taacccagcc aaagtagcat
      841 gccgtacaag gggccggtgt gaaatccgcc gcccttgccc ttaattccgc tgagagtcca
      901 ttttatgctt taatcatttt ctcgcagcat ccgtctaaac cagcaaggag gcggagacca
      961 tgaaaaacac tatgaaatcg atatcgattt ttgcgctagt catgactttg gcagcgggtt
     1021 gcgccggggg cgcgatcacc acgcgcgaaa agggtatcgg cattggcgcc ttgggtggcg
     1081 cgactgcggg tggtttgatc ggtaccgccg tacgtaaacc gttggcaggc gcaatgatcg
     1141 gcgcggttct cggcgccggc gccggtggct tgatcggcga cggcctgcag ggccgggata
     1201 ttcagggcaa cgagcaggac caggcgatcc agcgcaacga gcaggaaatc ctgcgccagc
     1261 gccgcgagct tgaagaactg cgacagcgac gtgaatatta atcgcgcaga ctgactagca
     1321 ttgcagaaac ggggggcttc ggctccccgt tttatttttc gggcatgttg attcttagcg
     1381 aaaaagtcgg cgtaggacgg aaaaaagcgc tgcgggcgat gttcgtgctg ctactgctgc
     1441 ttgtctccgt cgcaccgcaa gcgtggtcgc tctccgcatc gctcagtcct ggcgatcata
     1501 cggcgacgct gcaattcgcc gggcgcgagc gcagcgccat cgttcatgta ccgcggcggg
     1561 cggcggagcg gcagctgttg cccgtggtac tcaactttca cggtggcggc ggccatggcg
     1621 ccaaccaaca agaatactca ctgcttgacg cggtggcgga gagcgaaagt tttatcacgg
     1681 tctatcccaa cggcactggc cg
//
LOCUS       DATIRS010000139         2749 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1682103, whole genome shotgun sequence.
ACCESSION   DATIRS010000139 DATIRS010000000
VERSION     DATIRS010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2749)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2749)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2749
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1682103"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1476)
                     /locus_tag="VLM90_01730"
     CDS             complement(<1..1476)
                     /locus_tag="VLM90_01730"
                     /inference="COORDINATES: protein motif:HMM:NF018332.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MDR family MFS transporter"
                     /protein_id="HSQ11700.1"
                     /translation="MNANRSAPAAKRNLAAIGVMMVIFLFAIDATVVSTSMPTIVAKL
                     GGLELYSWVFTIYMLTSALTTPIFGKLADLFSKRRLMLIGIAIFLLGSMLCGLAQSME
                     AMIVFRAVQGLGGGAIYALSFIVIGVIFPADQRAKMQGIISGIWGLASILGPLAGGVI
                     VENWSWGWIFFINLPLIAIATTLIVVGLKEEAGPRRDARLDIAGAFTLTVGLLLLFYA
                     LAQSAHARHPLNAETLSYIGAGLVILIVFYFIERRAAEPILPVDLFHSGLYKSSAAVA
                     TISAMGVFGAISYMPLFLQGVIGLTATATGLVILILSMGWTAGSLLAGRWINRFGYRF
                     AAVTGMSLLAIGYAIFVAPQFSASIVAVAVSAGAIGVGMGMANLTTLVAAQSSVSPQR
                     IGVATSTVMLFRTFGAAFAVSVMGTVMLSQMQSSLGQLRAANPTVDASVWSKLANPQT
                     LLEPLTRAQVPADLLPKLIASLSDALWYAFLTGFVLMLLGLL"
     gene            1616..2620
                     /locus_tag="VLM90_01735"
     CDS             1616..2620
                     /locus_tag="VLM90_01735"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ11701.1"
                     /translation="MLQKFTLLTLVTISYVCVPRMAAAQITAELIDAAKKEGEVMLYG
                     AITVNSSKAVGDAFEKKYGIKLRHWRGDATELINRSLAEARAGKPAFDVTLGNEVVMA
                     ALDEKSLFAVFEPPAAKAFPKQFLDPDKKMTPWRVLPYGINYNHQLLKAEEAPKNWEE
                     LLQPKWKGKFGVANPGIHVTTLQFVLNLDKLLGPKWLKVVEGWAQQEPRIGRSLADNI
                     QPLTSGEIQVAVGYIKDKFQYPGPIEYVRMNKYLASLSFIAINRQAPHANAARLFADF
                     FVGPEAQRIFGNFGEYVFHPEADHKFKKDVKDDQILVMRLPNNEELTNWSKKFREMFR
                     "
BASE COUNT          652 a          739 c          851 g          507 t
ORIGIN      
        1 taaaagaccg agtagcatca gaacgaaacc ggtcaaaaac gcataccaca gcgcgtcact
       61 gaggctggcg attaacttgg gcaacagatc cgccggaacc tgcgcgcggg tgagcggctc
      121 caagagagtt tgcggattgg ccagtttgga ccagacggag gcgtcgacgg tggggttggc
      181 ggcgcgcaat tggccgagag agctttgcat ttgactgagc atcaccgtgc ccatgacgct
      241 gacggcgaac gccgcaccga aggtgcggaa caacataaca gttgaggtcg ccacgccgat
      301 gcgttggggc gagaccgagc tttgtgccgc gaccagagtg gtgagattgg ccatgcccat
      361 gccgacgccg atggcgccgg cgctaactgc gacggcgacg atgctcgcgc taaactgcgg
      421 cgcgacgaag atggcgtagc cgatagcgag caaactcatg ccggtcaccg cggcgaagcg
      481 ataaccgaac cggttgatcc agcggccggc aagcaaactg ccggcggtcc agcccatgct
      541 cagaatcaaa ataaccagac cggtggccgt ggcggtcagg ccgatcacgc cctggaggaa
      601 cagcggcatg tagctgatcg cgccgaacac gcccatggcc gagatcgtgg cgacggcggc
      661 ggacgattta tacaagccgc tgtgaaacag atcgacgggc aggatcggct cggcggcgcg
      721 ccgctcgatg aaatagaaga cgattaaaat caccaaaccg gcgccgatgt agctcaaggt
      781 ttcggcgttt agcgggtggc gcgcgtgagc gctttgcgcc agagcgtaga ataataacag
      841 caagccaacg gtcagcgtga atgcgccggc gatatcgagt cgagcgtccc ggcgcgggcc
      901 tgcttcttct ttcaagccga cgacgataag ggtcgtggcg atggcgatca gcggcaggtt
      961 gatgaagaag atccagcccc aactccaatt ctcgacaatg acgccgccgg ccagggggcc
     1021 gaggattgag gcgaggcccc agatgccgct gatgatgcct tgcatcttag cgcgctggtc
     1081 ggcgggaaag atcactccga tgacgataaa cgacagcgca tagatggcgc cgccgccgag
     1141 cccttggacg gcgcgaaaga cgatcatcgc ctccatgctt tgggccaggc cgcatagcat
     1201 agagccgagg agaaagatcg cgatgccgat cagcatcagc cggcgcttgc tgaacaggtc
     1261 ggcgagcttg ccgaagatcg gcgtggtcag cgccgaggtc agcatgtaaa tcgtaaacac
     1321 ccagctatag agttccaggc cgcccaattt ggcgacgatg gtcggcatcg acgtgctgac
     1381 gacggtcgcg tcgatggcga aaagaaagat caccatcatg acgccgatgg cggcgagatt
     1441 gcgcttggcg gcgggcgcgc ttcggttggc attcatgatg gcggcgatcg acgatgtcgg
     1501 tcctcttgag ttgtcttaga ttggcttggg agtcaagccg cagcaaaaat tgcgcattgc
     1561 gttgacgcgc gctgccggca gcgctaaaaa agcagctatc ttacggaggc acctgatgtt
     1621 gcaaaaattt acgctactca ctctcgtcac gatcagttat gtctgtgtcc cgcgcatggc
     1681 cgcggcgcag atcacggctg aattgatcga cgccgccaaa aaagaaggcg aggtgatgct
     1741 ctacggcgct atcaccgtca actcgtcgaa agcggtcggc gatgccttcg agaagaagta
     1801 cggcatcaag ctgcgccact ggcgcggcga cgcgaccgaa ctgatcaatc gcagtctggc
     1861 tgaagcgagg gcggggaagc cggcgttcga cgtcacgttg ggcaacgaag tggtgatggc
     1921 cgcgctcgac gagaagagcc tgttcgccgt cttcgaaccg ccggcggcaa aggcttttcc
     1981 gaagcagttt ctcgacccgg acaaaaagat gacgccctgg cgtgtgttgc cctacggcat
     2041 caattacaat caccaactct tgaaggctga agaagcgcct aaaaattggg aggaactgtt
     2101 gcagccgaag tggaaaggta agttcggtgt cgccaatccg ggcattcacg tgacgacgct
     2161 gcagttcgtt ttgaatctcg acaagttgtt gggtcccaag tggctcaagg tggtcgaggg
     2221 atgggcgcag caggagccgc ggatagggcg cagtctagcg gacaatatcc agccgttaac
     2281 ctcgggcgag atccaggtcg ccgtcggcta catcaaagat aagtttcagt atcccggtcc
     2341 catcgagtat gtgcgcatga ataaatattt ggcgtccttg agtttcatcg cgatcaatcg
     2401 ccaggcgccg cacgccaacg cggcgcgcct gttcgccgat ttcttcgtcg ggcctgaagc
     2461 ccagcgcatc ttcggtaact tcggcgaata tgtgtttcat cctgaagccg atcacaagtt
     2521 caaaaaggat gtgaaggacg accagatcct agtcatgcgg ctgccaaaca acgaggagct
     2581 gacaaattgg agcaagaagt ttcgggaaat gtttagatga ccagcagtaa agtattgaaa
     2641 taatacagta ttaaagtatt cactattcgg tcgattactc catgactcca atcttccagc
     2701 atgggcttcg aggcaacaaa tgcttgaatt aaataagatc tcagttcct
//
LOCUS       DATIRS010000140         2523 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_796999, whole genome shotgun sequence.
ACCESSION   DATIRS010000140 DATIRS010000000
VERSION     DATIRS010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2523
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_796999"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            176..1162
                     /locus_tag="VLM90_01740"
     CDS             176..1162
                     /locus_tag="VLM90_01740"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ11702.1"
                     /translation="MALAALIFTFSVPNPSIAQIKSNLSSSVTSESMTHVWVARERGL
                     FKKYGVDMQFILMPRNPLAIAALLAGEIDAAIIGPGHLVNAGLSGAELAGIANFNQKL
                     DFRLNTRPDIKKPEDLRGKRIAVSGPGSTSHLVSMLALQGLNLDPVQAKISFLTIPGT
                     EMNRRLALESGSVDATTLRGAMGEVYANKGYNLLYNLKSAGVTLPQNMMVTTRRAAAT
                     KPQVIEGHLKATIEAIAMINDPANKELVNRLLATNLRLSNPADVEESYQAVITNYERA
                     PHTSVEGMKRLQKLLIQLNPKIADVRVETLLDNSFMNKLESSGFIQGLYKKN"
     gene            1212..>2523
                     /gene="tcuA"
                     /locus_tag="VLM90_01745"
     CDS             1212..>2523
                     /gene="tcuA"
                     /locus_tag="VLM90_01745"
                     /inference="COORDINATES: protein motif:HMM:NF006130.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent tricarballylate dehydrogenase
                     TcuA"
                     /protein_id="HSQ11703.1"
                     /translation="MRTENIPVVVVGGGSAAFEAAVAAKQAGAPRVVMLEKAPEPEFG
                     GNARYSHTGFRWVFSGADEIRQFLPDVDDAMFAKLNLPAYSAELFHGDLQRVTRGRID
                     QTLADVLVSQSNAAIHWMRELGIKWEIDSHVVIDGRYYFEPGLVVHPVGGVGGGLGQL
                     GQWREIALGMGVELRYESRVKALLGNDRHIEGVVVSDPNEEYEIKSGSIVLCAGGFQA
                     NAEMRARYLGPNADLMKVRGSRHDTGEVLMMTLAMGAKAAGHWQGAHATPIDSTYPDV
                     EIGSKANRYGYPYSITVNTLGQRFFDEGEARHSYTYAKTGWAVLGQPGALAYQIYDQK
                     TIPLLGNRYEFSTPIEAKSIDELAGKIGIEPTVLKHTVTEFNNAARKDVVFDATKLDG
                     KCTEGITPKKSNWASPIDTPPYWAFSVTGGVTFTFGGLQINTQAQ"
BASE COUNT          577 a          695 c          738 g          513 t
ORIGIN      
        1 ttgggtgaga agaagcccga ataacccgcc gcagatgtag ggcgattcat gaatcgcccc
       61 tacgttgcga aggaatcctt caatgcgtta tgtagcgctg cgatggccgg atcttctaag
      121 gaagatcaca agtgcaattt ggccggcgag gccaagaatt gccttggact tttggatggc
      181 attggcagct cttattttta ccttttccgt cccgaatccc tcgatcgcgc aaatcaagtc
      241 gaacctttcc tccagcgtga ccagcgaaag catgactcat gtctgggtgg cccgcgaacg
      301 cggcttgttc aaaaaatatg gcgtcgacat gcagttcata ctcatgccgc gcaatccctt
      361 ggccatcgcg gctttgcttg cgggtgaaat tgacgcggcg atcatcggtc ccggccatct
      421 cgtcaatgcc ggtctgagcg gcgcggagct cgccggcatc gccaacttca atcagaaact
      481 ggattttcgc cttaacacgc gccccgacat caagaagccg gaggaccttc gtggcaaacg
      541 gatcgcggtc agcggtccag gatcaacgtc gcatctggtg tcgatgttgg cgcttcaagg
      601 actcaatctc gacccggttc aagcgaagat ttcttttttg acgataccgg ggactgaaat
      661 gaaccggcgc ttggccctcg agagcggcag tgtcgatgcc accacgctaa gaggcgcgat
      721 gggcgaggtc tacgccaaca aaggttataa cttgctttat aacttgaagt ccgccggagt
      781 gactctgccg cagaacatga tggtgacgac gcggcgcgcg gcggcgacaa agccgcaggt
      841 gatcgaaggc catttgaaag ccacgatcga ggcgatcgcg atgattaacg atccggcgaa
      901 taaggaactc gtgaaccggc tcttggcaac taacttgcgt ttgagcaatc cggccgatgt
      961 cgaggaatcc tatcaagccg tgatcaccaa ctatgagcgc gcgccgcaca ccagcgtcga
     1021 gggaatgaag cggctgcaaa aactcttaat ccagctcaac ccaaagatcg ccgacgtgcg
     1081 cgtcgagacg ctcctcgaca actcgttcat gaacaaactc gaaagttccg ggttcattca
     1141 gggcttgtat aaaaagaatt gatcattcac tcactataat aattgacatc gaagatggag
     1201 aattttgcac cgtgagaacg gaaaacatcc cggtggtagt tgtcggcggc ggcagcgccg
     1261 cctttgaagc ggcggtggcg gccaagcaag ccggcgcgcc gagagtcgtg atgttggaga
     1321 aagcgccgga gccggagttt ggcggcaacg cgcgctattc gcacaccggc tttcgctggg
     1381 tgttttccgg cgccgacgag atccgccaat ttttgccgga tgtcgacgac gcgatgtttg
     1441 cgaaactgaa cttgccggcc tattccgcgg aactgtttca cggcgatttg cagcgggtca
     1501 cgcgcggccg catcgaccag actttagccg acgtgctggt gagccagtcc aacgcggcga
     1561 ttcattggat gcgcgagttg ggcatcaagt gggagatcga tagtcacgtg gtgatcgacg
     1621 gccgctatta ttttgagccg ggattggtgg tccatccggt cggcggcgtc ggcggcggac
     1681 tgggccaatt aggacaatgg cgcgagatcg cgctgggcat gggcgtcgag ctgcgctacg
     1741 agtcgcgggt caaagcgtta ctcggcaacg accggcatat cgaaggcgtc gtggtctccg
     1801 accccaatga agaatacgaa atcaaaagcg gatcaatcgt tctttgcgcc ggcggctttc
     1861 aggctaatgc ggaaatgcgc gcgcgctatc ttgggcccaa tgccgatctg atgaaggtgc
     1921 gcggtagccg gcacgatacc ggcgaagtgc tgatgatgac cttggccatg ggcgccaaag
     1981 cggccggcca ttggcaaggc gcccacgcga cgccgatcga ttcgacctat cccgacgtgg
     2041 agatcggcag caaagccaat cgttacggtt atccttacag catcacagtc aatactttgg
     2101 gacagcgctt tttcgacgaa ggcgaagcgc gccattcata tacttacgct aagaccggtt
     2161 gggccgtgct cggccaaccc ggcgcgttgg cgtatcaaat ctacgatcag aagacgattc
     2221 cgctgcttgg caaccgttac gagttctcca cgcctataga agctaaatca attgacgagc
     2281 tggccggcaa aatcggcatc gagcccaccg tgctcaagca cactgttacg gaattcaata
     2341 acgcggcgcg caaggatgtc gtcttcgacg cgactaaact cgacggcaaa tgcaccgaag
     2401 gcatcacgcc gaaaaaatcc aactgggcta gtccaatcga cacgccgccc tactgggcgt
     2461 tttcggtaac cggcggggtg acctttactt tcggcggctt gcagatcaat acgcaagcgc
     2521 agg
//
LOCUS       DATIRS010000141         3620 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1682187, whole genome shotgun sequence.
ACCESSION   DATIRS010000141 DATIRS010000000
VERSION     DATIRS010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3620)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3620)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3620
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1682187"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..833
                     /locus_tag="VLM90_01750"
     CDS             <1..833
                     /locus_tag="VLM90_01750"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: protein motif:HMM:NF006587.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
                     /protein_id="HSQ11704.1"
                     /translation="TTYIKMMGHTAPVNLGVFLGVTGRIITTSSACTSGSQGIGYAYE
                     TIRAGRQRAMIAGGAEELCVTEVAVFDTLFATSVRNDAAETTPRPFDIDRDGLVLGEG
                     AGTLILEEFDHAQARGAPVYAEIVGFGTNSDGCHVTQPNAKTMQVAMELALADANLPP
                     SAIGYINAHGTGTQHGDVAESLATCKLFGNQVPVSSLKSYMGHTLGACGALEAWMSIE
                     MMRSGWFAPTINLASVDPACAELDYIVNQGRGLDCEYVMSNNFAFGGINTALIFRRMA
                     "
     gene            1140..1586
                     /locus_tag="VLM90_01755"
     CDS             1140..1586
                     /locus_tag="VLM90_01755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11705.1"
                     /translation="MKRISQLTIVAALTLSAAWPAHARDDKLMFPVAPALEAKDAKEK
                     LDGSVKFYFGNQETPKVLTKLGTDVTNQKTNKFGKSDERACNWVFLSAMIQLDKRAKQ
                     LGANAVVNIVSYYQKNVMSSPTEFECHAGNIIAGVALRGEFVKIAE"
     gene            complement(1887..2471)
                     /locus_tag="VLM90_01760"
     CDS             complement(1887..2471)
                     /locus_tag="VLM90_01760"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSQ11706.1"
                     /translation="MRLPRQNLAAILAALALSLIAITDTTADSREEIPFVPTPTDVVD
                     KMLELAEVKKGDVVYDLGSGDGRIVIRAAQKYGVRAVGIEMDRLLLDKARKDAKAAGV
                     SHLVEFRAEDAMKVDLTKATVVTLYMLPWFNEAMKPSFKKYLKPGARIVAHDFAIEGW
                     EPDKTVKLPDPEKKVGGLIHYHTLFLWRIGKGGK"
     gene            2631..>3620
                     /locus_tag="VLM90_01765"
     CDS             2631..>3620
                     /locus_tag="VLM90_01765"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ11707.1"
                     /translation="MEHDSPGTPKKRPPISLPFYYGWFIVSLCFLTTLTSAGVRSSPQ
                     VLILPLQLEFGWSRALIASGISINLLLFGVAAPISGWLIDRFGPRKVMLGSLILLITG
                     VSGTVAMTEFWHFFLVWGVIVGLGAGGVGSVLTATVGNRWFVARRGLALGILGSASST
                     GQLIFLPFFMWMIANSGWRIGSTVLIILAILLLPLLYFFMRDDPADVGLEPYGAGQTN
                     VGGGAASLRGMSSKNATITAREVVTHPTFWLLCGTFFVCGGTANGLIGTHLIPHEIEI
                     GIPQIAAASLVGIMGTLNIVGTTFSGWMVDKVSPHKWLALVYALRGLSLLILPF"
BASE COUNT          708 a         1013 c         1066 g          833 t
ORIGIN      
        1 cgaccactta catcaaaatg atgggtcata ccgcgccggt taatctcggg gtttttcttg
       61 gcgtgaccgg gcgcatcatt acaacttcga gcgcttgcac ctccggcagc cagggcattg
      121 gttatgctta tgaaaccatc cgcgccggcc ggcaacgggc gatgatcgcc ggcggcgccg
      181 aagagttatg cgtcaccgaa gtggcggtct tcgacaccct gttcgccacc agtgtgcgca
      241 acgatgccgc cgagaccacg ccacgcccct tcgacatcga tcgcgatggt ttggtcctag
      301 gcgagggcgc cggcactctg attctcgaag agttcgacca tgcgcaagcg cgcggtgcgc
      361 cggtctatgc cgagatcgtc ggtttcggca ccaacagcga cggctgtcat gtcacgcagc
      421 ccaacgccaa aaccatgcaa gtggcgatgg agctggcgct cgccgatgcc aatttgccgc
      481 cctcggcgat cggttacatc aatgctcacg gcacgggcac gcaacatggc gatgtcgccg
      541 aatcgctggc gacgtgcaaa ctgttcggca accaggtgcc ggtgagctcg ctcaagagtt
      601 acatgggaca taccctcggc gcctgcggcg cgctggaagc gtggatgtcg atcgaaatga
      661 tgcgcagcgg ttggttcgcc ccgacgatca atctggccag cgtggatccc gcctgtgccg
      721 agctcgatta catcgtcaac caaggccgcg ggctcgactg cgagtatgtc atgtcgaaca
      781 acttcgcctt cggcggcatc aacaccgcgt tgatcttccg gaggatggcc tagggtaaat
      841 tgctacgttg attattcaga atgtaatgga tcgaacaaga ggaagactca ccgcagaggc
      901 gccgaggacg ctgaggtagg aatatttatt atgaaacctt ccgaactctg tgaccttcgc
      961 gcctctgcgg tgaaatcttc ttaggatcga tcgttggcat attcgaacgc catgttggca
     1021 acgtcatcgt cacggtatgg ctgaaaggcg acttggtgca gatcgtcgaa taaaggagtt
     1081 gccgttcggg tcgcagagag tttatagttc taagcctaaa ccccagaagg aggagatcga
     1141 tgaaaagaat ttctcaatta acgattgtcg ctgccttaac cttgagcgct gcttggccgg
     1201 cgcacgcgcg cgatgacaaa cttatgtttc cggtcgcacc tgccctggaa gccaaagatg
     1261 ccaaagagaa gcttgacggc tcggtgaagt tttatttcgg caaccaggag acgccaaaag
     1321 ttctcaccaa gcttggcacc gacgtgacca atcaaaagac caataaattt ggtaaatctg
     1381 acgaaagggc gtgcaactgg gtgttcctgt cggcgatgat tcaactcgac aagcgcgcca
     1441 aacaattggg cgccaatgcc gtcgtcaata tcgtcagcta ctatcagaaa aacgtcatgt
     1501 cgagcccgac ggagttcgag tgccatgccg gtaacataat cgccggcgtc gccctgaggg
     1561 gtgaattcgt caagatcgcg gaataatgaa ttgctggcgt cgggaggctt ctaagtagga
     1621 accttaaagc gccgaagtcg agggtcgtcc gagcggtccg cgaaaacacc gttcagccta
     1681 acttacgttc cgagcggccc cgatcgattt gccaaagcgc gccaagaagc gcgccgccct
     1741 cgccatattg cgcgacgagc cggtcaaggt cggcgctgag tgatccggta tgccgcggtt
     1801 tacgtggcgt ccgaggcgag gcgcaatggc ggcgtcgtga agccaatggc gaccagccct
     1861 aagtcgctaa ccagtcagct gcgcggttac ttcccaccct tgccaatacg ccacaaaaac
     1921 aacgtgtgat agtggatcaa tccgccgact tttttctccg ggtcgggcag cttaacggtc
     1981 ttgtccggtt cccagccttc aatggcaaaa tcgtgggcga cgatgcgggc gcccggtttc
     2041 aaatatttct tgaagctcgg tttcatcgct tcattgaacc atggcagcat gtaaagcgtg
     2101 accacagtgg ctttggtgag atcgactttc atggcgtctt cggcgcggaa ttcgaccagg
     2161 tggctgacgc cggcggcttt ggcgtcttta cgagctttgt cgagcagcag tcggtccatt
     2221 tcgatgccca ccgcgcggac gccatatttt tgcgcggcgc ggatgacgat gcggccgtcg
     2281 ccgctgccga gatcgtatac cacgtcgcct tttttgactt ctgccagctc aagcattttg
     2341 tcgacgacgt ccgtcggcgt cggcacgaag gggatttctt cgcgagagtc ggcggtcgtg
     2401 tcggtaatcg ctatcagcga cagagcgagc gcggcaagaa tggcggcaag gttttgtcgt
     2461 gggagtctca ttcagctact tgtttccttt catagtgcga ttgaacaatc tggcgcattg
     2521 gcaataacta tctgatcgcg ctccgggctg tcaattcact cgctttggct tctcgcctag
     2581 ctgggacgat cctgtttgtg attggcgccg aattcagtct atatgaaggg atggaacacg
     2641 acagccctgg cactcccaag aagcgtccac cgatctctct gcctttttac tatggttggt
     2701 tcattgtctc gttgtgtttt ttgaccactc taacgagcgc tggcgtgcgc tcgtcgccgc
     2761 aagtcttgat tcttccattg cagttggagt tcggctggag cagggcgctg atcgcttcgg
     2821 ggatcagcat aaatctgttg ctcttcggcg tggccgcgcc gatcagtggc tggctgatcg
     2881 accgcttcgg gccgcgcaag gtcatgcttg gcagcctgat tctgttgatc accggggtca
     2941 gcggcacggt tgccatgacc gagttctggc attttttctt agtttggggc gtcatcgtag
     3001 gtctgggcgc gggcggcgtc ggctcggtgt tgaccgccac cgtgggaaat cgctggtttg
     3061 tcgcgcggcg cggactggcg ctgggaattc tcggcagcgc cagttcgacg ggtcaactga
     3121 tatttctgcc gttcttcatg tggatgatcg ccaactccgg atggcgcatc ggttcgacgg
     3181 ttttgatcat tctcgcgatc cttttgttgc cgctgctgta tttcttcatg cgcgacgatc
     3241 cggccgatgt cggcttggag ccctacggcg ccggacagac caatgtcggc ggtggcgcgg
     3301 cctcgctgcg cggcatgtcc tcgaagaatg ccacgatcac ggcgcgcgaa gtcgtcaccc
     3361 acccgacctt ttggctgctg tgcggcacct tctttgtctg cggcggcacg gccaatggat
     3421 tgatcggcac gcatttgatc ccgcatgaaa tcgagatcgg catcccgcag atcgccgccg
     3481 catctttggt cggcatcatg ggcacgctca acatcgtcgg cacgaccttt tccggctgga
     3541 tggtcgataa ggtatcgccg cataaatggt tggcgctggt ttacgccttg cgcggcctgt
     3601 cgttactcat cttgccgttt
//
LOCUS       DATIRS010000142         2268 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1485802, whole genome shotgun sequence.
ACCESSION   DATIRS010000142 DATIRS010000000
VERSION     DATIRS010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2268
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1485802"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..370
                     /locus_tag="VLM90_01770"
     CDS             <1..370
                     /locus_tag="VLM90_01770"
                     /inference="COORDINATES: protein motif:HMM:NF012506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="citrate/2-methylcitrate synthase"
                     /protein_id="HSQ11708.1"
                     /translation="TARKQRMPGIGHRTHAEGDPRAETLFNIARSTEVYGKYCELIQR
                     LSKLSSDRRQRLIPVNVTGAIAAIALDMGYPWQISKAFALIGRTLGAIGHIAEEIQNP
                     MAPQIDLAIKQALVYEPVRT"
     gene            537..1298
                     /locus_tag="VLM90_01775"
     CDS             537..1298
                     /locus_tag="VLM90_01775"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HSQ11709.1"
                     /translation="MSYQNILSTRVDKVAVITLNRPEKLNAMSYELAADLDEELGNIE
                     GDDEVRCVVLTGAGPRAFSSGGDIHQMVRSTPEEMAARTDKRREMNWHLATFTKPIVG
                     AINGIAYGAGAQLTTMLDIRIGCENSEIQFLAAKYGRANSTWSLPLVVGMAKAKELLF
                     TGRPIRAEEAERIGLLNQVVPSSQLLDSAIAMAKQIGDNDPRMVQGIKKLLDDGVGAP
                     WRERFDAEQNARKNKLKANSPREGFKAFLERKGIS"
     gene            1424..>2268
                     /locus_tag="VLM90_01780"
     CDS             1424..>2268
                     /locus_tag="VLM90_01780"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSQ11710.1"
                     /translation="MSLSVAENELITHIGPGTPGGEMMRRYWHPIGFASELQGRPLRR
                     RLLGEDLVLFRDDQGKLGILTLRCPHRGTSLEFGHIEDGGLRCCYHGWLFNTEGKILQ
                     MPGEPLDSTYKDRLKQKAYKLEELAGMLFAYLGPEPAPLLPRWDVMVREDGVRALAGR
                     VMHCNFLQAVENSVDQHHFKWLHRTPKTSLWSGETLTSDPFEFGIKATFTRTVSAGSF
                     MTKSFFLFPNMNKVGYHLNEDHPAAFAATHEGYEALRWRVPVDDTNTMHFTLYFAPIV
                     DGKVTA"
BASE COUNT          499 a          734 c          635 g          400 t
ORIGIN      
        1 caccgcccgc aagcagcgca tgcccggcat cggccaccgg actcatgcgg aaggcgatcc
       61 ccgcgccgag acgcttttca acatcgcccg cagcacggaa gtctacggca aatattgcga
      121 gctgattcag cggctatcga aactctctag cgaccggcgc cagcgcttga tcccggtcaa
      181 cgtcaccggc gccatcgcag ccatcgcgct cgacatgggt tatccctggc agatctccaa
      241 agccttcgcg ctgatcggta gaactttagg cgccatcggc catatcgccg aagaaatcca
      301 aaaccccatg gcgccgcaga tcgacctcgc gatcaagcaa gcgctggtct acgaaccggt
      361 gcgcacttag acagattcga gacagagact agagacagag accggagtcg gagaaagagg
      421 cgagaacggg caccatccga atctctgtct ccgtcaccgt ctctgtctct gtctcatgcc
      481 tgtttgctcc cgtcccgcct ttttgttcta atgcggccaa cttggaggag cactgcatgt
      541 cataccaaaa cattctcagc acgcgcgtcg acaaggtcgc cgtgatcacg ttgaatcgtc
      601 cggagaagtt gaacgccatg agctacgagc tcgccgccga cctggacgag gaactcggca
      661 acatcgaagg cgacgacgaa gtccgctgcg tcgtcctcac cggcgccgga ccgcgggcgt
      721 tttcatccgg cggcgatatt caccagatgg tcagatcgac gcccgaagag atggccgcgc
      781 gcaccgacaa gcgccgcgaa atgaactggc acctggcgac cttcaccaag ccgatcgtcg
      841 gcgccatcaa cggcatcgcc tacggcgccg gcgcccagct aacgacgatg ctcgacatcc
      901 gcatcggctg cgagaatagc gaaatccaat tccttgccgc caagtacggc cgggcgaact
      961 ccacctggtc gctgccgtta gtagtgggca tggcgaaagc caaagaactg ctctttaccg
     1021 gccggccgat ccgcgccgaa gaagccgagc gcatcggcct gctcaatcaa gtcgttccga
     1081 gctcgcagtt gctcgacagc gccatcgcca tggccaaaca gatcggcgac aacgatccgc
     1141 gcatggtcca aggcatcaag aagctacttg acgacggtgt cggcgcccct tggcgcgagc
     1201 gtttcgacgc cgagcaaaac gccagaaaga acaagctcaa ggccaactcg ccgcgcgaag
     1261 gcttcaaagc atttctcgag cgcaagggaa tcagctaaat gtcatggttc gttttcgtca
     1321 ttccggcgta ggccggaatc caggttttat accagcgaac cgaggacgaa gatggatacc
     1381 ggcctgcgcc ggtatgacgg agtaaagatt caggagcaat cccatgtccc tcagcgtcgc
     1441 tgaaaacgaa ctgatcaccc atatcggccc cggcacgccc ggcggcgaaa tgatgcgccg
     1501 ttactggcat cccatcggct tcgccagcga gctccaaggc cggccgctgc ggcgccgctt
     1561 gcttggcgag gacttggtgc tatttcgcga cgatcaaggc aagctcggca ttctcaccct
     1621 gcgctgtccg caccgcggca cgtctctgga atttggccat atcgaagacg gcggcttgcg
     1681 ctgctgctac cacggctggc tattcaacac cgaaggcaag atcttgcaga tgccgggcga
     1741 gccgctcgac agcacctaca aagaccggct caagcaaaaa gcctacaagc tcgaagagct
     1801 cgccggcatg ctgttcgctt atctcggccc ggagccggcg ccattgttgc cgcgctggga
     1861 tgtcatggtg cgcgaagatg gcgtgcgcgc attggccgga cgggtgatgc actgcaattt
     1921 tttgcaggct gtcgagaaca gcgtcgacca gcatcatttc aaatggctgc accgcacccc
     1981 gaagacgagc ttgtggtcgg gggaaacact gacatccgat ccctttgaat tcggcatcaa
     2041 agcgaccttc acgcgcaccg tcagcgccgg ctcgttcatg accaagagct ttttcctgtt
     2101 tcccaacatg aacaaggtcg gctaccacct gaacgaagat catcccgccg ccttcgccgc
     2161 cacccacgaa ggctacgagg cgctgcgttg gcgcgtgccg gtggacgaca ccaacaccat
     2221 gcacttcacg ctctacttcg cgccgattgt cgacggcaaa gtcacggc
//
LOCUS       DATIRS010000143         2274 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1682521, whole genome shotgun sequence.
ACCESSION   DATIRS010000143 DATIRS010000000
VERSION     DATIRS010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2274)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2274)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2274
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1682521"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..705
                     /locus_tag="VLM90_01785"
     CDS             <1..705
                     /locus_tag="VLM90_01785"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HSQ11711.1"
                     /translation="LIAAVKGYKLILTMPDTMSEERRSLLSAYGAHLVLTPDTKGMGG
                     AIHKAEELLQENGDFYMPQQFNNPANPEIHRKTTALELLKQFKRIDAFVAGVGTGGTI
                     TGVGEVLKEKMKGVRICAVEPASSPVISGGEPGYHKIQGIGAGFIPAVLNVDILDEVI
                     TVTDEEATQHARRLAAEEGLLVGISSGAACCAALKVAQKLGKGHVVVTLFADKGEHYL
                     STDLFSDKRWTPNLPT"
     gene            681..1493
                     /gene="larE"
                     /locus_tag="VLM90_01790"
     CDS             681..1493
                     /gene="larE"
                     /locus_tag="VLM90_01790"
                     /inference="COORDINATES: protein motif:HMM:TIGR00268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent sacrificial sulfur transferase
                     LarE"
                     /protein_id="HSQ11712.1"
                     /translation="MDAKFTHLTEILRQSDRTLVAFSAGVDSTFLLKAAHLALGDGAI
                     ALTASSASVPPGELDAAKHFAASLGCRHIILDSHEIDNPAYAQNPVNRCFFCKDELYR
                     ICREQAEKMRIATIVDGTNLDDLKDHRPGLQAADQWRVRHPLVEAGMTKDDIRRYSQE
                     LTLPTWDKPSSPCLSSRFPYGTAIDLAKLKQVGACELFLKGLGFREFRVRYHGDLARI
                     EVNQNEIDRLFDKTIRDAIVTRFKEVGFSFVSLDLQGFRSGSLNEVLKAPAR"
     gene            complement(1490..2188)
                     /gene="ispD"
                     /locus_tag="VLM90_01795"
     CDS             complement(1490..2188)
                     /gene="ispD"
                     /locus_tag="VLM90_01795"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: protein motif:HMM:NF013308.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050518 - 2-C-methyl-D-erythritol
                     4-phosphate cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HSQ11713.1"
                     /translation="MHVAAIIVAAGAGRRIGGAIPKSYLPIAGRPLILRTVDRIFSSH
                     SVAEVILVVSEDEIERCRQLLEADVALKGRPYVLQAGGTTRQQSVRHGLQKVSASTDI
                     VMIHDGARPFVSVALIDLCIAAAAAHGAAVVGLPVRDTIKQVGKDGYVQSTPERAGLW
                     EIQTPQIFQRELIVAAHDWAAREGVEATDDAMVVERMDKSVFVVAGERTNFKITVPED
                     LLFAEALIRAGVVT"
BASE COUNT          509 a          689 c          623 g          453 t
ORIGIN      
        1 ttgatcgcgg cggtcaaggg ttacaagttg atcctgacca tgcccgacac catgagcgag
       61 gagcgccgca gtctgctatc ggcctatggc gcgcacttgg ttctcacccc cgacaccaag
      121 ggcatgggtg gcgcgattca caaggccgag gagctactcc aagaaaacgg cgacttctac
      181 atgccacagc aatttaacaa tccggccaat ccggaaattc accgtaaaac caccgcgctt
      241 gagctgctca agcagttcaa gcgtatcgac gcctttgtcg ccggcgtcgg caccggcggc
      301 acgattaccg gtgtcggcga agtgctcaaa gaaaaaatga agggtgtcag aatctgcgcc
      361 gtcgaaccgg cgtcctcgcc ggtcatttcc ggcggcgaac cgggttatca caagattcaa
      421 ggcatcggcg ccgggttcat tcccgcggta ttgaacgtgg atattctcga cgaagtgatc
      481 acggtcaccg acgaggaagc gacacaacac gcgcgcagat tagccgccga ggaaggactc
      541 ctggttggga tctcatcggg cgccgcctgc tgcgccgcgt taaaagttgc gcaaaaactc
      601 ggcaaaggcc atgtggtcgt cactctgttc gccgacaagg gtgagcatta cctgagcacc
      661 gatcttttta gcgacaaacg atggacgcca aatttaccca cctgaccgag attttgcgac
      721 aatcggaccg aaccctggtg gcgttctccg ccggcgtcga ttcgacattt ttgttgaaag
      781 ccgcgcatct cgctttgggc gacggcgcca tcgcgctgac ggcttcgtcg gcatccgtgc
      841 cgccgggcga gcttgacgcg gcgaagcatt tcgccgccag cttaggctgc cgccatatca
      901 tcctcgactc ccacgaaatc gacaatcctg cttacgcgca gaatccagtc aatcgttgtt
      961 tcttctgcaa agacgagctc tatcggatct gccgcgagca agcggaaaag atgagaatcg
     1021 caaccatcgt cgatggcacg aacttggatg acctcaagga tcatcgtcca gggctgcaag
     1081 cggcggatca atggcgcgta cgccacccat tggtcgaagc cggcatgacc aaggacgaca
     1141 ttcgccgcta cagccaagag ctgactttgc cgacctggga caaaccgtcg agcccctgcc
     1201 tgtcgtcgcg ctttccctat ggcaccgcca tcgatctggc aaaactcaag caggtgggcg
     1261 cctgcgagct gtttttgaaa gggttgggct tccgcgagtt tcgcgtgcgc tatcacggcg
     1321 atctggcaag aattgaagtc aaccagaacg aaattgaccg gctcttcgac aagacgatca
     1381 gagacgcgat tgtcacacgt tttaaagagg taggattcag tttcgtgagt ctcgacctac
     1441 agggctttcg cagcggtagc ttgaacgaag tcctcaaagc gccggcgcgt taagtaacca
     1501 cgccggcgcg gatcaacgcc tctgcgaaca acaaatcttc cggcacggtt atcttgaaat
     1561 tcgtccgctc ccccgccacg acaaagaccg atttgtccat gcgctcgacc accatcgcgt
     1621 cgtcggtcgc ttcgacacct tcacgcgccg cccaatcatg ggccgcgacg attaactcgc
     1681 gctgaaaaat ctgcggcgtc tggatttccc acaggcccgc cctctcaggg gtgctttgaa
     1741 cgtagccgtc tttgcctacc tgtttgatgg tgtcgcggac cggcaggcca actaccgccg
     1801 caccgtgcgc cgctgcggct gcgatacaaa ggtcaatgag cgccaccgat acgaatggcc
     1861 gggcaccatc gtggatcatc acaatatcgg tgctcgcact gaccttttgc agcccatgcc
     1921 tgaccgattg ctggcgcgtc gtgccacccg cctgcaaaac atagggacgg cctttcaacg
     1981 caacgtccgc ttcaagcagc tgacgacaac gctcaatctc atcctcgctc acgactaaaa
     2041 tcacctcggc gaccgagtgc gaggaaaata ttcgatccac tgtgcgtagg atgagcggtc
     2101 tcccggctat tggcagatag ctcttaggaa tggcgccacc aatccggcgg cctgcaccgg
     2161 cggcaacgat aatagcggct acatgcatcg gggctccaaa acaaaagagc cgagaggtag
     2221 ctctcggctc ttgcaatata ctcggtttcg attcgatgct tagtgggtga atat
//
LOCUS       DATIRS010000144         1638 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_601241, whole genome shotgun sequence.
ACCESSION   DATIRS010000144 DATIRS010000000
VERSION     DATIRS010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1638
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_601241"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..872)
                     /locus_tag="VLM90_01800"
     CDS             complement(<1..872)
                     /locus_tag="VLM90_01800"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ11714.1"
                     /translation="MAASIIRQITEDWDFMKLIVVSLFLFLIAVPAQARKVSVGIPVV
                     DVSQSALYVARDRGYFHKEGLEVELVLMRGGVANQALITGNVDFTTVPTAALQAGLQG
                     APVKVLLSTFHKPMFWLYSRQAIRTPKDLSGKKVAVSSLGAAGDSALREWLKKNGMDE
                     NREVAILAIGTTATRLGSLSTGVVDAAMMTFPHNITAAEQGFRELVSFIASDIIQLQG
                     AIVTRDGLLQSDPGMVEEFLRATIRGLIYYSTNRSGAVPILARNAKSSEDLAGKVYDL
                     VKPALTPEGILNDD"
     gene            965..>1638
                     /locus_tag="VLM90_01805"
     CDS             965..>1638
                     /locus_tag="VLM90_01805"
                     /inference="COORDINATES: protein motif:HMM:NF013213.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HSQ11715.1"
                     /translation="MLIDAHVHLDKYGDLLDRALGEIDAQRIFTVATAMDLPSYLELQ
                     KIGERSQLVLPTFGIHPRRAAEYANRLPELSRYIDRSPAIGEIGLDFHWVKDAGTYPA
                     QRKVLEYFIAAAGEQNKFVNLHTKAGEKEILDLLVKYNVRRAIIHWYSGPMDVLAAMI
                     DFGCYFTIGVEVLYFDYIKTIAKTVPDHLLLTETDNPGALQWLRKADGLGMPSAINTV
                     IEALARV"
BASE COUNT          370 a          508 c          438 g          322 t
ORIGIN      
        1 aaatcgtcat tgagtatccc ctccggcgtt agcgccggct tgaccagatc ataaactttg
       61 ccggctaaat cttccgacga tttggcgttg cgcgccagga tcggcaccgc gccgctgcga
      121 ttggtcgagt aataaatcag cccgcggatc gtcgcccgga gaaattcctc gaccattccc
      181 ggatcggatt gcaacaagcc gtcgcgcgtg acaatggcgc cttggagttg aatgatgtcc
      241 gaggcgatga acgacaccag ctcgcgaaac ccctgttcgg cagcggtgat gttgtgcgga
      301 aaggtcatca tcgccgcgtc gacgacgccg gtggacagcg agcccagccg ggtcgcggtg
      361 gtgccgatgg cgagaatcgc cacctcgcgg ttttcatcca tgccgttttt ctttagccac
      421 tcgcgcaacg ccgagtcccc cgccgcgcct aagctcgaca ctgcgacttt cttgccgctc
      481 agatctttag gagtgcgaat cgcctggcgc gagtaaagcc agaacatcgg cttgtgaaag
      541 gtgctgagca ataccttcac cggcgccccc tgcaaccccg cttgtagcgc cgccgtcggc
      601 accgttgtga agtcaacatt gccggtgatc agcgcctggt tcgccacccc gccgcgcatc
      661 aacaccagtt cgacttcgag accttccttg tggaagtaac cgcggtcgcg ggcgacatac
      721 aacgcgctct gcgaaacatc gaccaccgga attccgaccg agactttgcg cgcttgagcc
      781 ggcacggcta taagaaagag aaacaatgag acaacgatca atttcatgaa atcccaatcc
      841 tccgtgattt gccggatgat agacgcagcc atctaccgcc tcaagacaat agaaaatcgc
      901 gcttgcaggg accctcaacc ggcaataaga tcgcgactga catcatggaa acaagggagc
      961 gaccatgctc atcgacgccc atgttcatct agataaatac ggcgacctgc tcgatcgggc
     1021 tctgggcgag atcgacgcgc agcgaatctt cactgtcgcc accgcgatgg acctgccgtc
     1081 ttacttggag cttcagaaga tcggcgagcg gtcccaactg gttctgccaa ccttcggcat
     1141 ccatccccgg cgcgccgccg aatacgcgaa tcgtttgccg gaactgagcc gctacatcga
     1201 caggagtccc gccatcggcg agatcggcct cgattttcac tgggtgaaag acgccggcac
     1261 ctatcccgcg caacgcaaag tcttggaata tttcatcgcc gccgccggtg aacagaacaa
     1321 gttcgtcaat ctccacacca aagccgggga gaaagagata ctcgatttac tcgtcaagta
     1381 taacgtccgc cgcgccatca tccactggta ctccggcccc atggatgttt tggcggcgat
     1441 gatcgacttc ggctgttact tcaccatcgg cgtcgaagtg ctctacttcg actacatcaa
     1501 gacgatcgcc aaaaccgtcc cggaccatct gttgttgacg gagaccgata atcccggggc
     1561 gctgcaatgg ttgagaaaag ctgatggcct cggcatgcca agcgcaatca acaccgtgat
     1621 cgaagctctg gcaagagt
//
LOCUS       DATIRS010000145         1611 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1092796, whole genome shotgun sequence.
ACCESSION   DATIRS010000145 DATIRS010000000
VERSION     DATIRS010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1611
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1092796"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            121..1284
                     /locus_tag="VLM90_01810"
     CDS             121..1284
                     /locus_tag="VLM90_01810"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HSQ11716.1"
                     /translation="MDYNLPEEIQILKETVRRFVDKELIPLEREYRHDSEGPMPEHLL
                     KPLQEKTKAMGLWMLDVPAEYGGAGLGLLPRCIIHEEIARAASLPFRSLELFGPEVRP
                     VLFHCNEEQKERFLKPVLRGELKFCFAQTEPDAGSDPANMRTRAVQDGDSFIITGTTR
                     FITAAGRADYAQLMAVTDTEKRARGGITCFAVDLKSPGVLLERQWPTMMGEAPWQLVF
                     DNVRVPAANVIGQVGGGFSIAQKWIGEGRIRGHGARPVGIAQRALDMMIEYSKVRSTF
                     GRPLADRQAIQFMIADSAMELHAVRNMVYECAWRVDRGEEVRDLSYMVKVMATEMASR
                     VVDRSIQVHGGLGLMKELPLEWWYRQIRSTRITEGANEVLRWRLGQNIIRAHH"
BASE COUNT          358 a          470 c          455 g          328 t
ORIGIN      
        1 ggatctccga tttccgtcac ccccgaatgt ttttatcggg ggtccagtac aaacatcgcc
       61 cggatacccg ctaaaagcat gcgggaatga aaacggtcaa acgactaaag agagacgctc
      121 atggattaca atctgcccga agaaatccaa atcttaaaag agacggtgcg ccgtttcgtt
      181 gataaggaac taatcccgct agaacgtgaa tatcgccacg acagcgaggg gccgatgccg
      241 gagcatttgc tcaaaccact tcaggaaaag accaaggcaa tgggcctatg gatgctcgat
      301 gtgcccgccg aatatggcgg cgccggtctc ggcctcctgc cgcgctgcat cattcatgag
      361 gaaatcgcgc gcgctgcttc tctccccttt cgcagtctgg agttgttcgg tcccgaggta
      421 cggccggtac tgtttcactg caacgaagag cagaaagagc gatttctgaa accggtcctg
      481 cgcggcgaac taaaattctg tttcgcccaa accgaacctg acgccggcag cgatccggcg
      541 aacatgcgca cgcgcgccgt gcaggacgga gactcattta tcatcaccgg cactacacgg
      601 ttcatcaccg ccgccggccg cgccgactat gcgcaattga tggcagtgac cgatacggag
      661 aagcgggcgc gcggcggcat cacctgtttc gcagtcgatc tcaagagtcc cggcgttctc
      721 ctcgaacgcc agtggccgac gatgatgggt gaagcgccgt ggcaactcgt cttcgataat
      781 gtgcgcgtcc ccgcggccaa cgtgatcggt caagtcggcg ggggtttctc catcgcccaa
      841 aaatggatcg gcgaaggaag aatccgcggc cacggtgcgc ggccggtggg catcgctcaa
      901 cgcgccctcg acatgatgat cgagtattca aaagtccgca gcacgttcgg ccggccgctc
      961 gccgaccggc aagcgattca attcatgatc gccgactcgg cgatggaatt gcacgccgtg
     1021 cgcaatatgg tttacgaatg cgcctggcgc gtcgaccgcg gcgaggaagt gcgcgatctt
     1081 tcgtacatgg tgaaggtcat ggccacggag atggcgagcc gcgttgtcga ccgctcgatt
     1141 caggtccatg gcggccttgg cttaatgaag gaattgcctc tcgaatggtg gtaccggcaa
     1201 atccgcagca cgcgcatcac tgaaggcgcc aatgaagtcc tacgctggcg cctcggacaa
     1261 aacatcatcc gcgcgcatca ctgaggcgct cgcagtcaga gtgatactgc tcggagccaa
     1321 ggaggagaga aacaaatccc tcacgttcgt tcgggatgac aggtggcctt cgctaccaag
     1381 gtgtcatttc gaggcgaaac cgagaaagct ttcctgatca gcgctgttca tttcgctaga
     1441 gtgatcgatc tagttttcca atatcctttt cacccgctcg atgacatcag gcggctgcgt
     1501 ggtcacctct ttcgccaaac tctgcatctc ttcccacgac accggttcga gatcatagcg
     1561 gcgcttcttc actgcggcga tgaattcggg atcttttaac attttgccgt a
//
LOCUS       DATIRS010000146         1514 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1682647, whole genome shotgun sequence.
ACCESSION   DATIRS010000146 DATIRS010000000
VERSION     DATIRS010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1514)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1514)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1514
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1682647"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(391..1380)
                     /locus_tag="VLM90_01815"
     CDS             complement(391..1380)
                     /locus_tag="VLM90_01815"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ11717.1"
                     /translation="MIGSRVSFLLVLFCVAWLAASARAEKIRTAIPGANLNYLSVYSA
                     EERKFFRDEGLDNETIAIGGPAGIAALVSGDVDFSGAGGSGLRGAVRGAPLKAIFYQT
                     EKPTWYLVVHPSISQGSDLKGKKIGVALIGDSEDRFITLYAERAGVSAKDITRISLGT
                     SIGDKILGLKSGNVAAVVLDPAGTVAAEREGLRKLVFMGDIFTLPFQGYVVTNQKLAE
                     NPAQVKRWLRAMTRSLLFIRERPEDAADIALRRLRIRNITKPMLTEAIRSYTRAFPPG
                     IPGVPSAEGVKSILENELRIPLKLDKPLAAENFFDLRWAEEVRKEMEAKGANP"
BASE COUNT          320 a          402 c          454 g          338 t
ORIGIN      
        1 gataaaaacc tttctgatat gccgcgtaga ttggcagaaa gccaacgctg gtggcggcga
       61 tgccgaggcg gagctttttg agtggggact gcgccggtgc cggcgagcaa agccagctgt
      121 ctatggcaag cactccgatg cagcagagca ttggcaggta acgtcgagac atggcggtgt
      181 ctcctttaaa atccgaaatt cgaagcacca aatccgaaac aaactcaaag ccaaatgaac
      241 ccaaaccccg agaaaatcca aaacactaat ccggagcatc tggtttggaa ttttctgctt
      301 tttgagcatt ttgatttgtt tcgagtttcg gatttcgagt ttcgtgcttg gcctttctcc
      361 atgagtcctt ggcgtctttg ggggagatga tcacgggttc gcgcctttcg cttccatctc
      421 ttttcgcact tcttccgccc agcgcaggtc gaaaaaattt tccgcggcga gcggcttatc
      481 gagcttgagc gggatccgca gttcgttttc gaggatgctc tttactcctt cggcggaagg
      541 cacgccgggg atgccgggcg gaaaggcgcg ggtgtagctg cggatcgcct cggtcaacat
      601 cggcttggtg atgtttctaa ttctcaagcg gcgtagcgcg atgtcggcag cgtcttcggg
      661 ccgctctcgg atgaacagta aagagcgggt catcgcccgg agccatcttt tgacctgtgc
      721 cgggttttcg gcgagcttct gattggtcac gacgtagccc tgaaagggta gggtgaaaat
      781 atcgcccatg aagacaagtt tgcgcagccc ttcacgttcg gcggcgacgg tgccggcggg
      841 atcaagcacg acggcggcaa cgttaccgct tttgaggccg aggattttgt cgccgatgct
      901 cgtgcctaat gagattctag tgatatcctt ggccgacacg ccggcacgtt cggcatacag
      961 cgtgatgaag cggtcttcgc tgtcgccgat cagggcgacg ccgattttct tgcccttgag
     1021 gtcggatccc tggctgatgc ttggatgaac gactaaatac catgtcggtt tttcggtttg
     1081 atagaagatc gccttgagcg gcgcaccgcg cacggcgccg cgcaggccgc tgccgccggc
     1141 gccgctgaaa tcgacgtcgc cgctgaccaa tgccgcgatg ccggccgggc cgccaatggc
     1201 gatggtttcg ttgtccaagc cttcgtcgcg gaagaattta cgctcctcgg cgctgtacac
     1261 gctcagataa ttgagattcg cgccggggat ggcggtgcga atcttttcgg cgcgtgcgct
     1321 cgcggcgagc caagcgacgc agaacaggac aagcaagaaa ctaacacggc tgccaatcat
     1381 ggaacctcca ataaagaaga atggccgcaa agaacccaaa gagcgcaaag aaagaatcgg
     1441 gagtcgtaca aggggcgggt ttgaatcgcg ctcctgcgaa acatcgtgct catggtatcc
     1501 ttcgtggtga atac
//
LOCUS       DATIRS010000147         2170 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1289353, whole genome shotgun sequence.
ACCESSION   DATIRS010000147 DATIRS010000000
VERSION     DATIRS010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2170
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1289353"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1032
                     /gene="jag"
                     /locus_tag="VLM90_01820"
     CDS             <1..1032
                     /gene="jag"
                     /locus_tag="VLM90_01820"
                     /inference="COORDINATES: protein motif:HMM:NF041568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_process: GO:0051510 - regulation of unidimensional cell
                     growth [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding cell elongation regulator Jag/EloR"
                     /protein_id="HSQ11718.1"
                     /translation="DNIDAAIENALKALGVGREKITVDIISEGRKGILGFGAQKAKVR
                     ASLRKLNLEPEPTPAKPQAAQTQQAPARAAEPRPRPAERRPPAESRRAEPPRAEPRAR
                     APEPRPRPPEPRFRPEPRPAQVPSPRPPAEPRAADAPPPLTPAEIEAMVAKAKTALAE
                     ILNLMGMNATVAEKAGVDSEETILEVKSDNSGLIIGRKGQTLEALQYLITRIAGERPG
                     NEAPHVVIDIENYHERRRQTLQDMALRLGEKAKRQRKTVTIDALSAADRRVVHAALQD
                     DPWLTTRSLGQGAYRRLLIIPEGDRKIKDDGPAPAQEREGERPQRSKRPNPPQPDEPE
                     EEEDDSGAS"
     gene            1205..>2170
                     /gene="ispG"
                     /locus_tag="VLM90_01825"
                     /gene_synonym="gcpE"
     CDS             1205..>2170
                     /gene="ispG"
                     /locus_tag="VLM90_01825"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: protein motif:HMM:NF001540.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HSQ11719.1"
                     /translation="MIERRKTRQIELGKVKVGGDAPITVQSMTKTDTRDVRATVQQIW
                     SLEAAGCEIVRCAVPVREAAEQLGEIKKKIRIPLVADIHFNYKLALIAIEQGVDGLRL
                     NPGNIGARKYVEEVVKAASERKIPIRIGVNAGSLEKDLLQKYNGPTAEGMVESGLRHI
                     HILEDVGYSEIKISLKASDPLMMIEAYRMLADQVNYAFHLGVTEAGTPGIGTIKSAVG
                     LGTLLAEGIGDTIRVSLAADPVEEVRIGLEILKALKLRKDGMTFVACPSCGRADVDLI
                     ALAKAVEERMLPYSNQNIHVAVMGCEVNGPGEARAADLGVAGGKGI"
BASE COUNT          490 a          638 c          676 g          366 t
ORIGIN      
        1 gataacatcg acgccgccat cgaaaacgcg ctgaaggcac tcggcgtcgg gcgcgaaaag
       61 atcaccgtcg atatcatttc ggaaggacgc aaggggatac tcggttttgg cgcgcagaaa
      121 gcgaaggttc gtgcttcgct gcgcaagcta aatcttgaac ccgagccgac gcccgccaag
      181 ccccaggccg ctcagaccca gcaggcaccg gcaagagcag cggagcccag accgcggccg
      241 gcagagcggc gccccccggc cgaatcgcgc cgagcggaac caccaagagc cgagccgcgc
      301 gccagggcgc cggaacctag accgcgaccg cctgagccgc gtttccggcc tgaaccacgt
      361 ccggcccagg ttccttcgcc ccgtccgcca gcggaaccgc gcgcggccga cgcgccgccg
      421 ccgctgacac cagcggagat cgaggcgatg gtcgccaagg cgaagacggc gctggctgag
      481 attctaaatt taatgggcat gaacgcgacg gtcgcagaaa aagccggcgt cgacagtgag
      541 gaaacgatcc tcgaggtcaa gagcgataac agcggcttga tcattggccg caagggacag
      601 accttagaag cgttgcaata cctgatcacc cgcatcgccg gcgaacggcc cggcaatgaa
      661 gcgccgcatg tcgtcatcga tatcgagaac taccacgagc gccgtcgcca gaccttgcaa
      721 gacatggcgc tgcgcttggg cgagaaggcc aaacgccagc gcaagactgt caccatcgat
      781 gcgctcagcg cagcggatcg ccgggtcgtt catgcggcgc tgcaagacga tccttggttg
      841 accacgcgca gtctcggcca gggcgcttat cgccgcttgc tgatcattcc cgagggtgat
      901 cgtaaaataa aagatgatgg ccctgcaccg gcgcaagagc gcgagggcga acggccgcag
      961 agaagcaagc ggcctaatcc gccgcagccg gatgaaccag aagaagaaga agatgatagc
     1021 ggtgcttcgt agtctggcgc ggatgcggta gctgttgacc aggatggaca tggttcgacg
     1081 gcggtcacta caggctccga tcacgatgtt cggaactata gtgatccaaa tacttcgtta
     1141 agttctcgtt acggcgcaaa tttgttaagt tgaccccaat gaatcggttc tctatagtcg
     1201 agccatgatt gagcgacgca agaccaggca gattgagctg ggcaaagtga aagtcggcgg
     1261 cgacgcgccg atcacggtcc agtcgatgac caagaccgac acccgcgacg tgcgcgccac
     1321 ggtgcagcag atctggtcct tggaagcggc tggttgcgaa atcgtccgct gtgccgtgcc
     1381 ggtgcgcgaa gcggccgagc agcttggtga aatcaagaaa aaaatccgca ttccgttggt
     1441 cgctgacatc catttcaatt acaaactggc tttgatcgcc atcgagcagg gcgtcgacgg
     1501 cctgcgcctc aatcccggca acatcggcgc tcgcaagtat gtcgaagaag tggtcaaggc
     1561 cgcgtccgag cgcaagattc ccatccgcat cggcgtcaac gccggctcgc tggaaaaaga
     1621 cttgctgcaa aagtacaacg gcccgacggc tgaaggcatg gtcgaaagcg gtctgcgcca
     1681 tattcatatt ctcgaagatg tcggttattc cgagatcaag atttccctca aagcttccga
     1741 tccgttgatg atgatcgaag cctatcgcat gctcgccgac caggtgaact atgcatttca
     1801 tctcggtgtg accgaggcgg ggacaccggg catcggcacg atcaaatccg ccgtcggctt
     1861 aggcacgctc ttggccgaag gtatcgggga caccattcgc gtgtcgttgg cggctgaccc
     1921 ggtggaagaa gtgcggatcg gtttggaaat tttgaaagcg ctcaagctgc gcaaagacgg
     1981 catgaccttt gtcgcctgtc cgtcctgcgg ccgcgccgat gtcgatctta tagccctggc
     2041 gaaggcggtg gaagagcgca tgctgccgta cagcaatcaa aacatccatg tcgcggtgat
     2101 gggttgcgaa gtcaacggtc cgggcgaagc gcgggcggcg gatctcggtg tcgccggcgg
     2161 caagggcatc
//
LOCUS       DATIRS010000148         1700 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1387885, whole genome shotgun sequence.
ACCESSION   DATIRS010000148 DATIRS010000000
VERSION     DATIRS010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1387885"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..389
                     /locus_tag="VLM90_01830"
     CDS             <1..389
                     /locus_tag="VLM90_01830"
                     /inference="COORDINATES: protein motif:HMM:NF012964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HSQ11720.1"
                     /translation="TAMAAKSSYVEQLQTSARLIAQKLGRQNCSLAFQIRSGRPSDPW
                     LEPDIGETIRTLAAKGQKEVIVAPIGFVCDHVEVLYDLDIEAKKLADGLGVNMIRAGC
                     PNDHPTFVRMMADVIAAKMNSVEDKQ"
     gene            446..>1700
                     /gene="hemG"
                     /locus_tag="VLM90_01835"
     CDS             446..>1700
                     /gene="hemG"
                     /locus_tag="VLM90_01835"
                     /EC_number="1.3.3.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR00562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004729 - oxygen-dependent
                     protoporphyrinogen oxidase activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase"
                     /protein_id="HSQ11721.1"
                     /translation="MKHIVIIGGGIAGLAAAHRIVELSQAKSLDVKTTLLEAAPRLGG
                     SIATERVNDFLVEAGPDSFITEKPWALKLCERIGLTPRLVSTQSAYQKIFIVHDGKLV
                     ALPEGFFLLAPTRLWPFLQTPLFSWPGKLRMASELFLPRCESNGDESLGAFVRRRFGN
                     EALERVAQPLVGGIYASDPDKLSLGATMPRFKEMERSSRSVIYAMWSAQRQRAKKAET
                     GSGARWSLFVTLAGGMQELVDNLAQRLPQGTVLLNAAATELKRNADNSWRVAVGSEQI
                     IEADAVILAAPAFCAGALLRQIASSAAEELTGISYASTATVSLAYRREDFPQAPSSFG
                     FVVPAIEKRKIMACTFSSLKYPGRAPQDKILLRAFVGGSLQPELSGASDGEMETSVRG
                     ELASLLGVTAAPRFSRIWRHPDSMPQ"
BASE COUNT          352 a          549 c          476 g          323 t
ORIGIN      
        1 caacggcgat ggcagcgaaa tcttcttacg tcgagcaatt gcagaccagc gcgcgcttga
       61 tcgcgcaaaa gctcggccgg caaaattgct ccctcgcgtt tcaaatccgc agcggccgcc
      121 ccagcgatcc ttggttggaa cccgacatcg gcgaaaccat aagaacgctg gctgccaaag
      181 gacaaaaaga agtcatcgtc gcccccatcg gttttgtctg cgaccatgtc gaagtgcttt
      241 atgacctgga tatcgaagcg aaaaagctcg ccgacggatt gggcgttaac atgatccgtg
      301 ccggctgccc gaacgatcat ccgacgtttg tgcgcatgat ggcggatgtc attgcagcta
      361 agatgaattc ggtcgaggat aaacaataga gaatggacga tcgcaacctt ctatcctcta
      421 ccatccatcc tcgacgcagt tgatcatgaa gcacatcgtc atcatcggcg gcggcatcgc
      481 cggcctcgcc gccgctcatc gcatagtgga actgagccag gcaaagtcgc tcgacgttaa
      541 aaccaccctg ctcgaagccg cgcctcgtct aggaggctcc atcgcgaccg agcgtgtcaa
      601 cgattttctc gtcgaagccg gccccgattc gttcatcacc gaaaagcctt gggcgctaaa
      661 gttatgcgag cggatcggct tgacccctcg gctggtttca acccaatcgg cttatcagaa
      721 aattttcatc gtccacgacg gcaagctggt cgccctgccg gaaggttttt tcctgctcgc
      781 gccgacccgc ctctggccgt ttctccaaac gccgcttttc tcctggcccg gcaagctgcg
      841 catggcgagc gaactatttt tgccgcgctg cgaatcgaac ggagacgaaa gtctcggcgc
      901 ctttgtgcgc cgccgtttcg gcaacgaagc tttggaacgg gtcgcccagc cgctggtcgg
      961 cggcatttac gcgtccgatc ccgacaagct cagtctcggc gccaccatgc cccggttcaa
     1021 agaaatggaa agaagcagcc gcagcgttat ctacgccatg tggtcggccc agcgccagcg
     1081 cgccaagaaa gccgaaaccg gcagcggcgc gcgctggagc ctgttcgtca ccctcgccgg
     1141 cggcatgcaa gaactggtcg ataatctcgc ccagcgtttg ccacaaggca cggtgctttt
     1201 aaacgccgcg gcaaccgagt tgaaacgcaa cgccgataac agctggcgcg tcgccgtcgg
     1261 cagcgaacaa attatcgaag ccgacgcggt catactcgcc gcgcccgcgt tttgcgccgg
     1321 cgcgttgctc agacagatcg ccagtagcgc cgccgaggaa ttgacgggta tctcctacgc
     1381 ctccaccgcc acggtcagcc tggcctaccg ccgcgaagat tttccccagg cgcccagcag
     1441 cttcggtttc gtcgtgcccg ccatcgagaa gcgtaagatt atggcgtgca ccttcagcag
     1501 tttgaagtat cccggccgcg cgccgcaaga taagatattg ctgcgcgcct tcgtcggcgg
     1561 cagcttgcaa ccggaactct ccggcgcaag cgacggcgag atggagacaa gcgtccgcgg
     1621 cgaactggcg agcttgctcg gcgtcaccgc cgccccgaga ttttcgcgca tctggcgcca
     1681 ccccgattcg atgccgcagt
//
LOCUS       DATIRS010000149         2915 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1781083, whole genome shotgun sequence.
ACCESSION   DATIRS010000149 DATIRS010000000
VERSION     DATIRS010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2915)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2915)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2915
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1781083"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..698)
                     /locus_tag="VLM90_01840"
     CDS             complement(<1..698)
                     /locus_tag="VLM90_01840"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ11722.1"
                     /translation="MLRIAVPDLVSNSYFPIIAAVEMGFFTEEGFDASVDLLFPIPKT
                     FEALRDGALDFVVGSAHATLLAFPEWQGAKLLAACGQHTYWFLVIRSDLKPQRGDLSI
                     VKGLRIGAAPGVNLSLQRLLVEAGIDPDKNDVQIMPIPGAAGPNVSFGLSAAKALEEG
                     TLDGFWANGMGCEVAVRRGVGTMVLDVRRGDGPTGARHYTFSALVATDQTIKGNPAAA
                     RAAVRALMKAHKAL"
     gene            complement(780..1130)
                     /locus_tag="VLM90_01845"
     CDS             complement(780..1130)
                     /locus_tag="VLM90_01845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11723.1"
                     /translation="MKIVRLYSGNDNKSHFEEIEMKFGGNQPMLSTDMRAATGAVFRS
                     APVGLFLERHPAPRRQYLVTLSGSWEIEASNGVKRVFTTGDVMLADDTSGEGHTSRVL
                     GSEPHVFMTVPLAD"
     gene            complement(1195..1809)
                     /locus_tag="VLM90_01850"
     CDS             complement(1195..1809)
                     /locus_tag="VLM90_01850"
                     /inference="COORDINATES: protein motif:HMM:NF014659.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HSQ11724.1"
                     /translation="MKSLRLLGLAALLHVIDVANAGLSGLAAPANSFLTGQLLVASSE
                     MKDPRFAESIIYLVKHDDTGALGLVVNKPVAKVAFDELLKGFGIDAKGAKGEIVVHYG
                     GPVDRYQGFVLHSDDWVLASSTKVKDGVAMTADAKMVQALADGKGPRQALLIMGYAGW
                     AAGQLEMELKANSWFAIGADKSLVFGNEPEKKWRRAMDKRQIPL"
     gene            complement(1856..2287)
                     /locus_tag="VLM90_01855"
     CDS             complement(1856..2287)
                     /locus_tag="VLM90_01855"
                     /inference="COORDINATES: protein motif:HMM:TIGR03618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PPOX class F420-dependent oxidoreductase"
                     /protein_id="HSQ11725.1"
                     /translation="MAEFIPVETGRAQEFLKNNHHGVLATRRKNGDLQMSPVTCGLDG
                     AGRAVISSRETAYKVNNLRRDPRAALCTFGNTFHGEGWVQVNGKAEIVSLPEALDTLV
                     YLQRQAYGEHKSWPEFHQRMAREQRVIIRIAIESVGPKVRG"
     gene            2464..2775
                     /locus_tag="VLM90_01860"
     CDS             2464..2775
                     /locus_tag="VLM90_01860"
                     /inference="COORDINATES: protein motif:HMM:NF014269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HSQ11726.1"
                     /translation="MTIPQMKCPEILPVFPLNGVMMLPGTVLPLHIFEPRYRDMVEDA
                     QQGDKMFGMIQPYAPQNDNRGPQPEAENSAPDLYKVGCAGFMESVKSCRMDGSSCSSR
                     G"
BASE COUNT          577 a          823 c          871 g          644 t
ORIGIN      
        1 tttaaagcct tgtgggcttt catcagcgcg cgcaccgcgg cacgggctgc tgccgggttg
       61 cccttgatcg tctggtcggt ggccaccagt gcagaaaatg tgtaatggcg tgccccagtt
      121 gggccgtcgc cgcggcggac atcgaggacc atggtgccga cgccgcgccg cacggcgact
      181 tcgcaaccca tgccattggc ccaaaaacca tccaatgtgc cttcttcgag tgctttggct
      241 gccgacaggc cgaaggaaac gtttggccct gccgcgccag gaatgggcat gatctgaaca
      301 tcatttttgt cgggatcgat gccggcttcg accaacagac gctgcaagct caaattgacg
      361 cccggcgccg cgccgatgcg caagccttta acgatgctca aatcgccgcg ctgcggtttg
      421 agatcgctac ggatgaccag aaaccagtac gtatgttggc cgcaggcggc gagcagtttg
      481 gcgccttgcc actcggggaa ggccagtagc gtcgcgtgcg ctgagccgac gacgaagtcg
      541 agggcgccgt cgcgcagagc ttcgaaggtt tttggaatcg gaaacaatag atcgacggaa
      601 gcgtcgaagc cttcttccgt gaaaaatccc atctcgacgg cggcgatgat gggaaaataa
      661 gaattcgata ctaagtccgg cacagcaatg cgaagcatat tttctccaag aggttcgatt
      721 ccggttgcca aacgactgga acgatttgaa cgtttggaac gactggaacc tattatcttc
      781 taatccgcca gcggcacggt catgaataca tggggctcgc tgccgagcac gcgcgaggta
      841 tggccttcgc cgctggtgtc gtcggcgagc atgacgtcgc cggttgtaaa tacccgcttg
      901 acgccgttgc tcgcttcgat ctcccaggag ccggagaggg tgacgagata ttgccgtcgc
      961 ggcgcgggat ggcgctccaa gaaaagtcct acgggtgcgg agcgaaacac cgcgccggtg
     1021 gcggcgcgca tgtcggtgct gagcatcggt tgattaccgc cgaatttcat ttcgatttct
     1081 tcaaagtgcg atttgttatc gttgccgcta tagagtctga cgattttcat aagtcctcct
     1141 aaatgatgtt ggctgttccc ggtgtggttt cctagctctg ccggttcttt catatcacag
     1201 gggtatctgt cttttgtcca tggcgcggcg ccattttttc tccggttcgt tgccgaagac
     1261 taacgacttg tcggcgccga tcgcgaacca ggagttggcc ttgagttcca tctccaactg
     1321 gccggcggcc caaccggcgt agcccatgat tagcaatgct tggcgtggac ctttgccgtc
     1381 cgcgagcgct tgcaccatct tggcgtcggc ggtcatggcg accccgtctt tgactttggt
     1441 gctgctagcg agaacccagt catcgctatg caggacaaac ccttggtaac ggtccaccgg
     1501 cccgccgtaa tgcacaacga tttcgccctt ggcgcctttg gcgtcgatgc caaagccttt
     1561 cagcagttcg tcgaaggcca ccttggcaac cggcttgttg acgactagac cgagtgcgcc
     1621 tgtgtcatcg tgtttcacca ggtagatgat cgattcggcg aaacgcgggt ccttcatttc
     1681 gctgctggcg acgagcaatt ggccggttaa gaaactgttc gccggcgctg ccagacccga
     1741 gagccccgcg ttcgcgacgt caatgacgtg cagtaacgca gccagcccaa gcagtctcag
     1801 ggacttcact ctagttaagg ttcgggcgcg acactgcatc gtttgatacg cgcggttagc
     1861 cgcgtacttt agggccgacg ctttcgatgg cgatgcgaat gatcacgcgc tgctcgcgcg
     1921 ccatgcgttg gtgaaattcc ggccagctct tgtgctcgcc gtaggcctgg cgctgcaaat
     1981 agaccagagt gtcgagggct tcgggtaggg aaacgatctc ggccttgccg ttgacttgga
     2041 cccagccttc gccgtgaaac gtattgccga acgtgcatag ggcggcgcgc ggatcgcggc
     2101 gcagattgtt gaccttgtac gcggtctcgc ggctgctgat caccgctcgg cctgcgccat
     2161 cgagaccgca ggttaccggc gacatctgca agtcgccgtt cttgcgccgg gtggcgagca
     2221 cgccgtgatg attgttcttg agaaattctt gagccctgcc ggtttccacc ggaatgaatt
     2281 cggccatggt gcgatttcct tattgcgaaa aatagttcaa gcggatggac gacaaagtag
     2341 aataccggcc ggatcgattg caagcgcgcg cgcgtagtat tcgcttggct cgctgacact
     2401 gccttcgtct tgaccgattt caccgcataa cctataacca agtcagaggg cgagcttgtg
     2461 accatgacca tcccacaaat gaagtgtccg gagattcttc cagtttttcc attgaatggc
     2521 gtgatgatgt tgccaggcac ggttttgccg ctgcatatct tcgagccgcg ctaccgcgac
     2581 atggtcgagg acgcccagca aggcgacaaa atgttcggca tgatccagcc ctacgcgcca
     2641 cagaacgata atcgcggacc tcagcctgag gccgagaaca gcgcgccgga tctgtacaaa
     2701 gtcggttgcg ccggtttcat ggaaagtgtg aaaagttgcc ggatggacgg ttcttcgtgc
     2761 agctcaaggg ggtaagccga tttcgctttg ccgaagagtt gccgttgcag cgcggttacc
     2821 gcagggtcaa agcgcactat agtgaattcg ccgacgcgga actggagcaa gactggcact
     2881 gtgcgcgcgc ggcgatcatc gaagcgctat cgatc
//
LOCUS       DATIRS010000150         3058 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_109413, whole genome shotgun sequence.
ACCESSION   DATIRS010000150 DATIRS010000000
VERSION     DATIRS010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3058
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109413"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..521)
                     /locus_tag="VLM90_01865"
     CDS             complement(<1..521)
                     /locus_tag="VLM90_01865"
                     /inference="COORDINATES: protein motif:HMM:NF018095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HSQ11727.1"
                     /translation="MKPGGKRSNCWTVALAILLLATACKKAEQVASPDDLPDLNKQTR
                     PYVTLENAKLRSGPGPQFRGIADIPANAKIHVVGRDGDWALIVSKKGNVPGFIELAAI
                     KPGEGESENEKPEFGEARRVEGRYEAMADTQVRSGPGLHYPALAEIAKGTKLNVVDEE
                     KGWLKVESKRGNKP"
     gene            complement(618..1037)
                     /locus_tag="VLM90_01870"
     CDS             complement(618..1037)
                     /locus_tag="VLM90_01870"
                     /inference="COORDINATES: protein motif:HMM:NF020489.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonyl-tRNA synthetase editing
                     domain-containing protein"
                     /protein_id="HSQ11728.1"
                     /translation="MKLLCFQAKRFRWKTHSKTLAEVADQDIDREVGETVVVFLHAEA
                     ADGNAERTATVLRQSLKHIKWLANKRGLRNVVLHSFSHLGGITASAALAESLMTTLQQ
                     RLSETGYQVWTTPFGYFCEWDLSVYGESLAKVWKEIH"
     gene            1105..1575
                     /locus_tag="VLM90_01875"
     CDS             1105..1575
                     /locus_tag="VLM90_01875"
                     /inference="COORDINATES: protein motif:HMM:NF019003.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050485 - oxidoreductase activity, acting
                     on X-H and Y-H to form an X-Y bond, with a disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine/sarcosine/betaine reductase
                     selenoprotein B family protein"
                     /protein_id="HSQ11729.1"
                     /translation="MQFNYVEFMTQLMAPQPYPSPPNFAAPKLARLRKPIAESTIGIF
                     TSAGVQLANDKPLAETNDLSYRLIGRDTLVSDLVIAHQTPVRVWALDDINVAFPRDRL
                     IELESEGTIGRLAPRAVSMVGSITKFTELIEQTVPAIHREFESQGVDLVFLFPF"
     gene            1630..1986
                     /locus_tag="VLM90_01880"
     CDS             1630..1986
                     /locus_tag="VLM90_01880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11730.1"
                     /translation="MPTLSMTCLLEVSQAFKPPRTVFLDFPMGCPAGQPHEPELQREI
                     LGSALKAAPEFGTPWKIFTLPFQWSADGSRAWETEVRELYRRGLATVSAHIADHRARG
                     ESLHGREPEFTLRCNC"
     gene            complement(1994..2560)
                     /locus_tag="VLM90_01885"
     CDS             complement(1994..2560)
                     /locus_tag="VLM90_01885"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: protein motif:HMM:NF012345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HSQ11731.1"
                     /translation="MILLIDNYDSFTYNLYHYLGELGAEVRVVYNDKISLDEIAALRP
                     EKIVISPGPCTPKEAGISCDVIKRFGAQTPILGVCLGHQSIGAAYGGKIVRAPSIMHG
                     KLSDVSHDAKTIFRGLKNPFAAMRYHSLVIDPQSLPAELLVSARTGDGVIMAVRHRSF
                     PVEGVQFHPESILAEAGKQLLKNFLDYR"
     gene            complement(2557..>3058)
                     /locus_tag="VLM90_01890"
     CDS             complement(2557..>3058)
                     /locus_tag="VLM90_01890"
                     /inference="COORDINATES: protein motif:HMM:NF012640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="anthranilate synthase component I family
                     protein"
                     /protein_id="HSQ11732.1"
                     /translation="ADPKERAEHIMLVDLGRNDVGRVAAIGSVEVNELMAIERYSHVI
                     HIVSNVRGKLAEDKTPFDLFVSAFPAGTLSGAPKIRAMQIIAELEPQKRSLYGGAIGY
                     FGYNGNLDTCIVIRTIVMKGKKLFINAGAGIVAYSDPALEYQETLNKARAMLRAVELA
                     EQWRKR"
BASE COUNT          603 a          858 c          902 g          695 t
ORIGIN      
        1 ggtttgttgc cgcgtttgga ttcgactttc aaccagcctt tttcttcatc gacgacatta
       61 agcttggtgc ctttagcgat ctcggccagg gccggatagt gcagtcccgg accgctacgc
      121 acctgggtgt cggccatggc ttcgtatcta ccttcgaccc ggcgcgcttc gccgaattcc
      181 ggcttctcgt tttcactttc gccttcgccg ggcttgatcg cggccagttc gatgaatcct
      241 ggaacgttgc ctttcttcga gacaatcaat gcccagtcgc cgtcgcggcc gacgacgtga
      301 atcttggcgt tggccgggat atcggcgatg ccgcgaaact gcgggccggg gccgctgcgc
      361 aacttggcgt tttcgagggt gacatagggg cgggtttgtt tgttcaggtc gggcagatca
      421 tcagggctcg cgacctgctc agcttttttg caggctgttg ccagtaagag gatcgccaat
      481 gcgacggtcc agcaattcga tcttttgccg ccaggtttca tgaaattcct cccaacctat
      541 atctactagt ggagactata acacaatcga caatcttggg ttggggatgc tgcaccgctt
      601 cgttaagcat acgggtttca gtgaatctct ttccaaactt tggcgaggct ctcgccgtac
      661 acgctcaaat cccactcgca gaaataaccg aagggcgtgg tccagacttg atagccggtc
      721 tcgctcaagc gttgctgcaa tgtggtcatg agagactcgg ccagcgcggc ggaagcggtg
      781 atgccgccaa gatggctgaa ggaatggagc acgacatttc tcaacccgcg cttgttggcg
      841 agccatttga tgtgtttcaa actctggcgc agtaccgtgg cggttctctc ggcgttgccg
      901 tcagcggctt cggcgtggag aaacacgacg acggtttcac ccacttcccg gtcgatgtct
      961 tgatcggcta cttcggcaag agtctttgaa tgggtcttcc agcgaaagcg cttggcttgg
     1021 aagcagagta gtttcatcga tgcaataacc taacaacgga ttgcagttgt tgcaattctt
     1081 cggtgcccta agttaggttc acctatgcaa ttcaattacg ttgaattcat gactcaactg
     1141 atggcgccgc aaccctatcc gtcgccaccg aacttcgctg cgccaaagct agcgcgattg
     1201 cgcaagccca tcgctgaatc aaccatcgga atttttacca gcgccggagt tcagctcgct
     1261 aacgacaagc ctttggccga gaccaacgat ctgtcctatc gattgatcgg ccgcgatact
     1321 ttggtttccg atttggtgat tgcgcaccaa acgcccgtac gagtctgggc actggacgat
     1381 atcaacgttg cttttccgcg cgaccggctg atcgagctcg aatctgaggg aacgatcggg
     1441 cggttagcgc cgcgcgcagt gtcaatggtc ggttcgatca cgaaatttac cgagctgatc
     1501 gaacagacgg tgccggcgat tcacagggaa ttcgaatctc aaggcgtcga cctggttttc
     1561 ttgtttccct tctgaccttc atgccatcgg tccgtcggac tgatcgccag agcgcttgag
     1621 gccaagggga tgccgacttt gagcatgacc tgcttgttgg aggtaagcca ggccttcaag
     1681 ccgccacgca cggttttcct cgatttcccc atgggctgtc cggcgggaca gccccacgag
     1741 ccggagctcc aacgtgagat tctcggcagc gcgttaaaag ccgcgcccga gtttggcaca
     1801 ccgtggaaga tcttcacgct gccgttccaa tggtcagccg acggcagcag agcctgggaa
     1861 accgaggtta gagaacttta ccggcgcggc ttggccacgg tgtcggcgca catcgccgac
     1921 catcgagcgc gcggcgagtc gctgcatggc cgcgagccgg aattcaccct gcgttgcaac
     1981 tgctagagtc gaatcaacgg tagtccagaa aattttttag caactgcttg cctgcttcgg
     2041 cgaggatcga ttcgggatga aactgcacgc cctcgaccgg gaaactccta tggcgcacgg
     2101 ccatgatgac gccgtcgccg gtgcgggcgc tgaccaggag ctccgccggt aaactctgcg
     2161 gatcgatcac cagggaatga tagcgcatgg cggcgaaagg gtttttcaag ccacggaaaa
     2221 tcgttttggc gtcgtggctt acgtccgaca gcttgccatg catgatcgac ggcgcgcgga
     2281 cgatcttgcc gccgtaggcg gcgccgatgg actgatgacc gaggcagacg ccgagaatcg
     2341 gcgtctgcgc gccgaaacgc ttgatcacat cgcaagaaat gccggcttcc ttcggcgtgc
     2401 aggggcccgg cgagatgacg attttctcag ggcgtaacgc ggcgatttca tcaaggctga
     2461 ttttgtcgtt gtagacgacc cgcacctcgg cgccgagctc gcccagatag tgatacaggt
     2521 tgtaggtgaa ggaatcgtaa ttgtcgatga gcaggatcat cgcttcctcc actgctcggc
     2581 gagctccacg gcgcgcaaca tggcgcgcgc tttgttcaag gtctcctggt attccagcgc
     2641 cggatcggaa taggcgacga tgccggcgcc ggcattgata aataatttct tgcctttcat
     2701 gacaatggtg cggatgacga tgcaggtgtc taaatttcca ttgtagccga agtagccgat
     2761 ggcgccgccg taaaggctgc gcttttgtgg ttccaattcg gcgatgatct gcatggcgcg
     2821 gatcttcggc gcgccggaga gcgtgccggc ggggaaggcc gagacgaaca gatcgaaggg
     2881 ggttttgtcc tcggccaatt tgccgcgcac gttggaaacg atatggatga catgggaata
     2941 ccgttcgatg gccatcaact cgttgacttc gacgctgccg atggcggcga cccggccgac
     3001 atcgttacgg ccgagatcga ccagcatgat atgctcggcg cgttccttcg ggtccgcc
//
LOCUS       DATIRS010000151         2278 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_896229, whole genome shotgun sequence.
ACCESSION   DATIRS010000151 DATIRS010000000
VERSION     DATIRS010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2278
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_896229"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..293
                     /locus_tag="VLM90_01895"
     CDS             <1..293
                     /locus_tag="VLM90_01895"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FCD domain-containing protein"
                     /protein_id="HSQ11733.1"
                     /translation="HFTIGRATRNQALQKLVSGLMELLSQSREDSLQTDVRRKASVDA
                     HRRIIGAIEMHDKTRARGEMLRHIEEVEKSVGGIHHGFGGNKKRFHPPGRAA"
     gene            459..2174
                     /locus_tag="VLM90_01900"
     CDS             459..2174
                     /locus_tag="VLM90_01900"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSQ11734.1"
                     /translation="MATITNSDKKEATGPVISGGHLVAKALKNEGVDVIWTLCGGHII
                     DIYDGCLDEGIKIIDVRHEQVAAHAADGYSRQSGKIGCVVTTAGPGTTNAMTGIANAF
                     RAESPLVMIGGQGALSQHKMGSLQDLPHVDIMAPITKFAASVPHTERVADMVSMAFRE
                     AVNGAPGPSYLEIPRDVLDAKVPLERARIPKAGAYRASTKSVGDPADIEKLADILVNS
                     ERPCALFGTQVWTSRGHDDAVSLCRALNMPGYMNGSSRGIFAPGDPHGFNRTRRAAFD
                     KADVILIVGCPFDFRLGYGRRLRADATVVQIDLDYRNVGKNRDISLGLVGDCGAILKA
                     VEKAASGRVSKGNSQRAEWMKELRNGETKAYEKLLPSFKSESMPINPYRVAYEINEFL
                     TDNTVYIGDGGDVVTITATAVEPRKAGNWMDPGPLGTLGVGTSFSMATKFVHPQKEVL
                     CYYGDGSFGMTAWDMETAQRFKLPYMAVIGNNSAMNQIRCGQIGKYGPERGGIGNKLG
                     DVDFEKFAECFGGWGIAVREPSQIRPALEKARERVAGGQCAIVNIWVDINEYAPGTKA
                     QTMYK"
BASE COUNT          513 a          653 c          690 g          422 t
ORIGIN      
        1 ttcatttcac gattgggcga gccacgcgta accaggcgct gcaaaaactg gtttccggct
       61 tgatggagct tttaagtcaa agccgtgagg attcgctgca aaccgatgtg cgtaggaagg
      121 cctccgtcga cgctcatcgc cggattatcg gcgccatcga aatgcacgac aaaacccgcg
      181 cgcggggcga aatgctgcgc cacatcgagg aggtcgaaaa aagcgtcggc ggaatacacc
      241 acgggtttgg aggcaacaag aaacggttcc atcctcccgg aagagccgcg tgatagggca
      301 atccgcctga gaaaaattgt ccggcgcgta atcgaccgct agccattggc cggcgtggcg
      361 tgactggatc aaatttcgcc aagctatatt gcagtgcgac aatgcggaac tcaaggcgcc
      421 gattcgctcg actgaaataa ttcaagaaag aggaaaccat ggcgacgata acaaatagcg
      481 acaaaaagga agcgactggg ccggtgatct caggcggtca cttggtcgcc aaagcgctca
      541 agaacgaggg cgtcgacgtg atctggacgc tgtgtggcgg ccatatcatc gacatttacg
      601 atggctgtct cgacgagggt attaaaatca tcgacgtgcg ccatgagcag gtcgcggccc
      661 atgcggcgga cggttattcg cgccagagcg gcaagatcgg ctgcgtggtg acgacggcgg
      721 ggccgggcac gaccaacgcc atgaccggca tcgccaatgc gtttcgcgcc gagagtccgc
      781 tggtgatgat cggtggccag ggcgcgctgt cgcagcacaa gatgggttct ttgcaagatc
      841 tgccccacgt tgacatcatg gcgccgatca ccaagttcgc cgccagcgtg ccgcacaccg
      901 aacgggtcgc cgacatggtg tcgatggcgt ttcgcgaagc ggtgaacggc gcgccgggac
      961 cgagctatct ggaaattccc cgcgatgtgc tcgacgccaa ggtgccgctg gagcgcgcgc
     1021 gcattccgaa agccggcgct tatcgcgcct cgacaaaatc ggtcggcgat cccgccgaca
     1081 tcgaaaagct cgccgacatt ctggtcaact cggaaagacc ttgcgcgttg ttcggcacgc
     1141 aagtgtggac ctcgcgcggc cacgacgacg cggtatcact ctgccgcgcg ctcaacatgc
     1201 ccggttacat gaacggttcg agccggggca tcttcgcgcc cggcgatccc catggattta
     1261 accgcacgcg ccgcgcggct ttcgacaaag ccgacgtgat actcatcgtc ggctgtccgt
     1321 tcgatttccg tttgggttat ggccggaggc tgcgcgccga cgcgaccgtg gtgcagatcg
     1381 atcttgacta ccgcaacgtc ggcaagaacc gcgatatctc gcttggactc gtcggcgatt
     1441 gcggcgcgat tctcaaagcg gtcgagaaag cggcgagcgg ccgcgtgtcc aaaggtaaca
     1501 gccagcgcgc cgagtggatg aaagagctgc gcaacggtga aaccaaggcc tacgaaaaac
     1561 tgttaccatc gttcaaatcg gaatcgatgc cgatcaaccc ttatcgcgtc gcttacgaga
     1621 tcaacgaatt cctgaccgac aacacggtct atatcggtga cggcggcgac gtcgtgacga
     1681 ttaccgcgac cgctgtcgag ccgcgcaagg ccggtaattg gatggacccg gggcctctcg
     1741 gcactttggg cgtcggcact tcgttctcga tggcgaccaa gttcgtccat ccgcaaaaag
     1801 aagtgctgtg ctactacggc gatggttcct tcggcatgac cgcttgggac atggaaaccg
     1861 cgcaacgctt caagctgccc tacatggcgg tgatcggtaa caactcggcg atgaaccaaa
     1921 ttcgctgcgg ccagatcggc aaatacggac cggagcgcgg cggtatcggc aataagctgg
     1981 gcgatgtcga ttttgaaaag ttcgccgaat gcttcggcgg ttggggcatc gccgtgcgcg
     2041 agccgagcca gatccgtccg gcgctggaaa aagcccgcga gcgcgtcgct ggcgggcaat
     2101 gcgccatcgt caatatctgg gtcgacatca atgaatacgc gcccggcacc aaggcgcaaa
     2161 cgatgtataa atagcagcaa gaattaataa tggagaatgg aaaattgata acgctcggaa
     2221 accatccgca atcttccatc ttccatcttc tattctccta tcttcgtggg cttcgtgc
//
LOCUS       DATIRS010000152         3965 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_306530, whole genome shotgun sequence.
ACCESSION   DATIRS010000152 DATIRS010000000
VERSION     DATIRS010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3965)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3965)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3965
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_306530"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..185
                     /locus_tag="VLM90_01905"
     CDS             <1..185
                     /locus_tag="VLM90_01905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11735.1"
                     /translation="PVTLVWGAKDGALSARVAMNSAIDAGCEVECRPLPGVGHFVGLE
                     AADKLAEEIRRVLVGS"
     gene            complement(347..1852)
                     /locus_tag="VLM90_01910"
     CDS             complement(347..1852)
                     /locus_tag="VLM90_01910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11736.1"
                     /translation="MSAIIDYSDVQGIVRYGYGHLPAAGFFLLRIKNPAAARSWLRTA
                     PVTNATAVAPPPQHALQVAFTGEGLDAIGLPRPILEKFSPEFISGMAGEESRSRRLGD
                     IAANAPSQWHWGGAEKMPHLLVMLYAQAGALEHWQNTVQNGSWDDAFTVLQCLPSADL
                     SDTEPFGFKDGISQPQLDWEQTKKLPGDQPEYSNLTALGEFLLGYPNEYGKYCDRPVL
                     PGGDDSTAGLLPAAEVTDQRDLGRNGSYLVLRQLEQDVAGFWRFLDRQTEGNVADQTK
                     LAEAMVGRRMNGEPLVSLSNGQFASADQAANDAMKLDGFTYESDSDGTRCPFGAHIRR
                     VNPRNGDLPYGTQGWFQWLMRTLGFHRKSFRDDLVSSTRFHRIVRRGRVYGSALPRAQ
                     ALSGVAVDDYERGLYFICINANIARQFEFVQNAWVMATKFDGLSGESDPLMGNRQPIP
                     GCPVTDAFSIPQDSGLPRRIHGMPQFVTVRGGGYFFLPSIRALWYIATLGD"
     gene            complement(1986..3287)
                     /locus_tag="VLM90_01915"
     CDS             complement(1986..3287)
                     /locus_tag="VLM90_01915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11737.1"
                     /translation="MTPQSHFMVVAPIAADRQAALSELLESLNSRPGVVDPLNSILPF
                     AQFGQLHFARLVILDDPTREDIRHHGIAPLPLPPSLLFLGDCDGDGDDFLESLVRHAG
                     KGLRQIFSHCEGLGSTDDLLQWLKDHSRRPGAMYVNWIGRTVAQIHEESALHHALVSY
                     LAGQTADFAPQEPRIIWQKLIAFVDDEIAAQRLTLSPAAATPIGWRIGNLLHLLGVPV
                     VLIFLAPWLILYLPVFAYQLRRRETADPEIAPRPDRDHVRRLAGLEDHDVTNQFSAIG
                     AVKPGLFRRWTVSFFVWILDYGARHLYRRGRLTRVGTIHFARWVFLDGKTRLFFASNY
                     DGSLEGYMDDFINKVGWGLNLVFSNGVGYPRTSWLILQGSKDEQKFKNYIRRHQLPTE
                     VWYNAHPGLTAFDLEINSRIREGLTKNFMSDDEIRRWLKLI"
     gene            complement(3363..3794)
                     /locus_tag="VLM90_01920"
     CDS             complement(3363..3794)
                     /locus_tag="VLM90_01920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11738.1"
                     /translation="MAYDVAKLLSMSQAELDTLFTNSPVGKIPDGEAEGTAIVAPGTI
                     FSSNIASFVSHFAWQGKVFDGKKGVLKNKILPFGLNAILAKVYKGPSWLDGKECIVLD
                     YSDTSIVAQWIRDEIREIEPGLYLGKVYWDKTRLIDFALKF"
BASE COUNT          877 a         1147 c         1139 g          802 t
ORIGIN      
        1 tcccggtcac gctggtgtgg ggcgccaagg atggcgcgct gtctgcccgg gtagcgatga
       61 acagcgccat cgatgcgggc tgtgaagtcg aatgccggcc gcttcccggg gtcggccact
      121 tcgtgggctt ggaggcggcc gacaagttgg ccgaggagat caggcgcgtg ctagtcggga
      181 gttgatgtct agtgaaaccg actcctcgcg ccttgtcggt gtgaggaata tcgtgccgag
      241 cgcgcgtgcc attgccgtgt tgcaagaaac attgttcagc tgtcgctctg ctgtcacgtt
      301 cgcttctgcg ccgcaggcgg catcgcgatc ggtgttggca cagatctcaa tcacccagtg
      361 tggcgatgta ccataacgcg cgaatgctcg gcagaaaaaa atagccgccg ccgcgcaccg
      421 tgacaaattg cggcataccg tggatacgcc gtggcagacc ggaatcctgg gggatggaaa
      481 aagcatccgt gaccggacaa ccgggaatcg gttggcggtt ccccatcaat ggatcgctct
      541 cgccggacag gccatcgaac ttggtcgcca ttacccaagc gttttgcacg aactcgaact
      601 gtcgcgcgat gttggcgttg atgcagatga agtaaagccc acgctcgtag tcgtcgaccg
      661 cgacgccact cagcgcctgc gcgcgtggca acgcgcttcc ataaacccgg ccgcgccgga
      721 caattcgatg gaagcgcgtc gaagatacca gatcgtcacg aaaacttttg cgatggaagc
      781 ccaaggtgcg catgagccac tggaaccagc cctgggtgcc gtacggcaaa tcgccgttac
      841 ggggattcac ccggcgaata tgggcaccga acgggcagcg agtgccgtcg ctgtccgatt
      901 cataggtgaa tccgtccagc ttcatggcgt cattcgcagc ctgatcggcg ctggcaaact
      961 ggccattgga tagcgacaca agcggttcgc cgttcatgcg ccgacccacc atagcttcgg
     1021 caagtttagt ttgatccgcg acattgccct cggtctgtcg atcgaggaag cgccagaaac
     1081 ccgcgacatc ctgttccaat tgtcgcaaaa caagataact gccattgcgc cccagatctc
     1141 tttggtcggt aacctcagcc gctggcaaca agccagcagt gctatcgtcg ccgccgggga
     1201 gcacgggccg gtcgcaatat ttgccatatt cgtttggata gccgaggagg aactccccca
     1261 acgccgtcag gttgctgtat tcgggctgat cgccgggcag ttttttcgtt tgttcccagt
     1321 ccagctgcgg ctgactaatg ccatctttga aaccaaatgg ttcggtgtcg cttaagtccg
     1381 cgcttggcaa gcattgcaaa accgtgaagg catcatccca agagccgttc tgcacggtat
     1441 tctgccagtg ctcgagagcg cccgcctggg cgtagagcat gacgagcaag tgcggcattt
     1501 tttccgcgcc gccccaatgc cattgcgacg gcgcgttcgc tgcgatatcg cccaaccggc
     1561 gcgaacggct ttcttcgccg gccatgccgg aaataaattc cggagaaaac ttctcaagga
     1621 tcggccgcgg caggccaatg gcgtcgagtc cttcgccggt aaaggccact tgcagcgcgt
     1681 gttgcggcgg cggcgccacc gccgtggcat tggtcaccgg cgccgtccgc agccaggatc
     1741 gagccgcggc tggattcttg atccgcaata ggaaaaaacc agccgccggc aagtggccgt
     1801 aaccgtatcg gacgatgcct tgcacatcgc tatagtcgat gatcgcgctc atttatcctc
     1861 gcgtccaaat aaaccagaat ttcgcctgcg cggcataaac cccgcacgcg accaaagggg
     1921 atgctcgccc cctttggatt ccccatttaa tggtgcccgc agcaagctgc ggggaatcct
     1981 tagatttaaa tcagttttaa ccatcggcgg atctcatcgt cgctcatgaa gtttttcgtc
     2041 agcccctcgc gaattcggct attgatctcc aggtcgaatg cagtgagtcc tggatgggcg
     2101 ttgtaccaga cctcggttgg cagctgatgc cggcgaatat aattcttaaa cttctgttca
     2161 tccttggagc cctgcaagat cagccaactg gtccggggat aaccgacgcc gttactgaag
     2221 acaagattca gcccccagcc gactttgttg atgaaatcgt ccatgtagcc ttccaagctg
     2281 ccgtcgtaat tgctggcgaa gaacagacgg gttttgccgt cgagaaacac ccaacgggca
     2341 aagtgaatcg taccgacacg ggtaagacgg ccgcggcgat aaagatggcg ggcgccgtag
     2401 tcgagtatcc aaacaaagaa acttaccgtc cagcggcgaa acagaccggg cttgacggcg
     2461 ccgatggcgc taaactgatt ggtcacgtcg tgatcttcca gcccggcgag ccgccgtaca
     2521 tgatctcgat ccggccttgg ggcaatctcc ggatcggcgg tctcgcgccg ccgcagctga
     2581 taggcaaaaa ccggcagata gagaatcaac cacggtgcga gaaatattaa aacaacaggc
     2641 acgcccaaaa gatgcagcaa attaccgatt cgccagccga tcggggtggc cgctgcgggt
     2701 gacaaggtca ggcgctgcgc cgcgatctcg tcatcgacaa acgcgataag tttctgccaa
     2761 attattcgcg gctcctgggg tgcgaagtcg gccgtttgac cggcaagata actcaccagg
     2821 gcatggtgca gagcgctctc ttcatgaatc tgcgccactg tgcgtccgat ccaattgacg
     2881 tacatcgcgc cagggcgccg cgagtgatcc ttcagccact gcaacaggtc atccgtcgag
     2941 ccgagccctt cgcagtggga aaagatctgc cgcaacccct taccggcgtg gcgcaccaag
     3001 gactcgagaa aatcatcacc atcgccgtcg caatcgccga gaaagagcaa ggaaggcggc
     3061 aacggcagcg gcgcgatacc atggtgtctg atatcttcgc gagtaggatc gtcgagaatc
     3121 accagccggg caaaatgcag ttgcccaaac tgcgcaaagg gcaggatcga gtttaacgga
     3181 tcgacgacac cgggacgtga gttcagcgat tctaatagtt cgctcaatgc agcttgccgg
     3241 tcggctgcga tcggcgcgac caccataaaa tgggactgag gcgtcacagc gatcctcgat
     3301 tacccgcgcg gattgccaat gaatagcaaa gaacgacgaa gtgacagggt tgccctgagc
     3361 atttaaaact tgagcgcgaa atcgatcagc cgggtcttgt cccaataaac tttccccagg
     3421 tagagtcccg gttcgatttc gcgaatctcg tcgcgtatcc actgcgcgac gatcgaggta
     3481 tccgagtaat cgagcacgat gcattctttg ccgtcgagcc agctcggccc cttgtagact
     3541 ttggcgagga tggcgttgag accgaagggc aggattttgt tcttcaacac gccctttttg
     3601 ccgtcgaaga ctttgccttg ccaggcgaag tgactgacga agctcgcgat attcgaacta
     3661 aaaatcgtgc cgggggcgac aatcgcggtg ccctcggctt cgccgtcggg aattttgccc
     3721 accggactgt tagtgaaaag cgtgtcgagc tcagcttgcg acatgctcaa aagtttagcg
     3781 acatcgtacg ccatgatggt ctcctccatt gcatcggtcg agatccgcgt tagcaaagcc
     3841 gtgcaaccgc gcaccgccga agggtaaact tacttggacg aaatgagttt cacataacct
     3901 caccggatcc gtcaagattt ttttgccgca gcgcgatttt tagaattcat acacgagggc
     3961 gacta
//
LOCUS       DATIRS010000153         3929 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1584732, whole genome shotgun sequence.
ACCESSION   DATIRS010000153 DATIRS010000000
VERSION     DATIRS010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3929)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3929)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3929
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1584732"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..506
                     /locus_tag="VLM90_01925"
     CDS             <1..506
                     /locus_tag="VLM90_01925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11739.1"
                     /translation="TREDDCGTEEGSWIIRTESSEEKGAFMRRLVGRLAAAPLPDPSV
                     KVKKGADPVLLIDRNEIITEEIAARIDGAEKAAGGPIDATEVNAIRADVESWLAPSFS
                     TLRYGLASYGQLRLTCPVQIRAGADDEAEMGAFHDLYQPQRETNLRVRLDEYLRFGLE
                     AGVFYDS"
     gene            929..>3929
                     /locus_tag="VLM90_01930"
     CDS             929..>3929
                     /locus_tag="VLM90_01930"
                     /inference="COORDINATES: protein motif:HMM:NF039478.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6519 domain-containing protein"
                     /protein_id="HSQ11740.1"
                     /translation="MSGDYSRQRFDVKHDFTGVLMQQGRVQLDADWNELVAILDRRLR
                     AETTDIIGKSTVPKETPEGFRIQLAAGVLTIGRGRIYVDGLLAENHGKAPMEFDPILA
                     EQRGTLALPYNEQPYFPEVASAAPAPTAGGPHLVYLDVWQREVTYLQDPNLVETAVGV
                     DTTTRLQTVWQVRVLANVGAGVTCGAALPAWDSLIAPSAGRLSSKAVGVATASDPCLI
                     PPSGGYRGLDNRLYRVEIHSAGAGGAGGTATFKWSRDNASVASAVTAITALDKLTVAS
                     LGRDSVMHFRIGDWLEITDDRRELGGQSGVMAQVKNVDDDNRIITLTAPLAAATFPTD
                     AQGNTTPAHHTRVRRWDQSGQVRDSNGVLIVDLNAPGSQGVIPLPASGTSIVLEDGVQ
                     ITFDGASGGNHHVGDYWNFAARTADASVQELNAEPPRGTHHHFARLALVTFPATVSDC
                     RTLWPPEFGDESCECTVCVSAAAHNQGTLTIQRAIDQVKAAGGGTVCLGVGVYNLGEA
                     PLPINIDGLRSLTIRGQGAETQLNYLGRGPAITVQNSAGVTIEKLALASAAAEGDAMP
                     AILLTNSGSVTLQRCAVLRLGSEATNSAAIGMAGILLSTTIRENLLVAPIGIGNLIKA
                     TAAGIAVAAQQSEPLITLALDIRDNGLFCGRRGVSFVGLALHALTTRVSGNFFSDCAQ
                     AGIAMLGYVPAGYSVEISANELRINGIGIAIGTDGTRVTENSITSVRARGANDGILVA
                     PGLDKTGIDQCHIIGNRVTAVGGHGVHLRAPVNSAMIKNNFIEDVGLGGIVMGEEASA
                     QNLCVENNQIRDVVGEPNSDKAAALIGIRLVDSKNGEVVNNSIIGVGLRAPNQRPVAI
                     QLIGCEAVRVAGNSALDIGPVEGNHTGAGIESVGTFDRLQIVGNTVRRSQTQTKLIDG
                     AQWYAVVISGARTVPPRLRAFTNFFAAKSNTSFILSDVKVIARPLGRELVSLHDNHFD
                     AYGAAQAVLIAISGACTFNDNRCLLLAL"
BASE COUNT          762 a         1214 c         1268 g          685 t
ORIGIN      
        1 tcacccgcga ggacgactgc gggaccgaag agggcagctg gatcatccgg accgagtcga
       61 gcgaggagaa gggtgcgttc atgcgccgtc tcgtcggccg actcgccgcg gcgccgctgc
      121 cggacccgtc ggtcaaggtc aagaagggtg cggaccccgt gctcctcatc gaccgaaacg
      181 agatcatcac cgaggagatc gccgcgcgca tcgatggcgc cgagaaagcc gcgggcggac
      241 cgattgatgc gaccgaagtg aacgcgattc gcgccgatgt cgagagttgg ctggcgccga
      301 gtttttcgac cttgcgctac ggcctggcga gttacggcca actgcggctt acttgtccgg
      361 tacagattcg cgccggcgcc gacgatgagg cggagatggg cgcgttccac gatctttacc
      421 aaccccagcg cgaaaccaat ttgcgcgtgc gcttggacga gtatctgcgc ttcggtctgg
      481 aggcgggagt tttttatgac agctgagcag gcttttcccc agacttcgcc ggagaaaaga
      541 ggttcgcctg tcggcgaaca gccgcaatcg aaactccgaa tatctctcgc aaaggcgcca
      601 agctcgcaaa ggtgacgggc gatgaccgtc atcccgagga aacacgaggg atctaagata
      661 gatttctccc aagggtcgaa atgacaacaa ttccgaactt ggcgtctttg cgccccttcg
      721 acgttgctca ggacatgctt ggcgagagga atttccgaat ccgagaatct tcgactcccg
      781 gaatattaaa gacgcaggct atgacaaaca tgttggtatt agattttttt gatggcaatg
      841 ccgggcactt cgcgtacggg gattaacccg cacgtgccca aagccggcat caaactgcgg
      901 cgaataactc gatcagaggg agtcaaacat gagcggagat tacagccggc aacgattcga
      961 cgtgaagcat gatttcaccg gcgtgttgat gcagcagggg cgggttcagc tcgatgccga
     1021 ttggaatgag ctggtcgcca tcctcgatcg ccgcctgcgc gccgagacca ccgatatcat
     1081 cggcaagagc accgtgccga aggagacgcc ggagggattt cgcatacagc ttgcggcggg
     1141 tgtcttgacc atcggccgcg ggcgcatcta tgtcgatggc ctgctcgcgg aaaatcacgg
     1201 caaggcgccg atggaattcg atccgattct cgccgagcag cgcggcacgc tggcgctgcc
     1261 ctataacgag cagccctact ttcccgaagt cgcaagcgcg gcgccggccc cgaccgccgg
     1321 cgggccgcac ctggtttatc tcgatgtctg gcagcgtgaa gtgacctacc tgcaggatcc
     1381 taatctggtc gagacggcgg tcggcgtcga taccacgacc cggcttcaga ccgtctggca
     1441 agtgcgcgtg ctggccaacg ttggcgccgg cgttacctgc ggcgcggcgc tgccggcttg
     1501 ggatagtttg atcgcgccgt cggccgggcg cttgagcagc aaagcggtcg gcgtggcgac
     1561 ggctagcgat ccctgcctga tcccgccgag cggcggctat cgcggtctcg acaatcgtct
     1621 ctatcgggtt gaaatccaca gcgccggggc gggcggtgcc ggcggcacgg cgaccttcaa
     1681 atggtcgcgc gacaacgcgt cggtggccag cgcggtaacc gcgatcacgg cgctcgataa
     1741 attaactgtg gccagcctcg gccgcgactc ggtgatgcat ttccgcatcg gtgattggct
     1801 cgagatcacc gacgatcgcc gcgagctggg cggccagagc ggcgtcatgg cccaggtgaa
     1861 aaacgtcgat gatgacaacc gcatcatcac gctgaccgcg ccgctggcgg cggcaacttt
     1921 ccccaccgac gctcaaggca acaccacgcc ggcgcaccac acccgggtgc gccgctggga
     1981 ccagagcggc caggtgcgcg atagcaatgg cgtcctgatc gtcgatctca acgcgccggg
     2041 cagccagggg gtgattccgc tgccggccag cggcacatcg atcgttctcg aggacggcgt
     2101 gcagatcacc ttcgacggcg ccagcggcgg caatcaccat gtgggcgact attggaactt
     2161 cgccgcgcgc acggcggacg cttcggtgca agagttgaat gccgagccgc cgcgcggcac
     2221 gcatcatcat ttcgcgcgtc tggcgctggt gacgtttccc gcaaccgtca gcgattgccg
     2281 gacgctctgg ccgccggagt ttggcgacga gagttgcgag tgcacggtct gcgtcagcgc
     2341 cgcggcgcat aatcagggca cgctgacgat ccagcgcgcc atcgatcagg tcaaagccgc
     2401 tggtggcggc acggtctgcc ttggcgtcgg cgtttacaat ctcggcgagg cgccattgcc
     2461 gatcaacatc gacggcctgc gctcgctgac gatccgcggt caaggcgcag agacgcagtt
     2521 gaattacctc ggacgcgggc cggccatcac cgtgcaaaac tccgccggcg tcaccatcga
     2581 aaagctcgcc ctcgccagcg ccgccgcgga gggcgatgcc atgccggcga tattgttgac
     2641 caacagcggc agcgtgacat tgcagcgctg cgcggttttg cggctcggca gcgaggcgac
     2701 caacagcgcc gccatcggca tggccggcat tctcctgagc acgacgatcc gggaaaattt
     2761 actggtcgcg ccgatcggca tcggcaacct gattaaagcg accgccgcag gcatcgccgt
     2821 ggcggcgcag cagagcgagc cgctcatcac gctcgccctc gacattcgcg acaatgggct
     2881 tttctgcggc cggcgcggcg tcagctttgt cggtctggcg ctgcatgcgc tgaccacccg
     2941 cgtgagcggc aactttttca gcgattgcgc ccaagccggc atcgcgatgt tgggttacgt
     3001 gcccgcgggt tacagcgtcg agataagcgc caacgagctg cggatcaacg gcatcggtat
     3061 cgccatcggc accgacggca ccagggtgac cgagaacagt atcacgtcag tgcgcgcgcg
     3121 cggcgcgaat gacggcatcc tggtcgcgcc gggcttggac aaaaccggca tcgatcaatg
     3181 ccatattata ggcaatcggg tcaccgctgt cggtggccac ggtgtccatc ttcgcgcgcc
     3241 agtcaattcg gcgatgatca agaataattt catcgaggat gtcggcctcg gcggcatcgt
     3301 catgggcgag gaggcatcgg cgcaaaacct gtgcgtcgag aacaaccaga ttcgcgatgt
     3361 ggtcggagag cccaacagcg acaaggcggc cgcgctcatc ggcattcgcc tggtcgatag
     3421 caaaaacggc gaagtcgtca acaattcgat aatcggcgtc ggcctgcgcg cgcccaatca
     3481 acggccggtg gcgattcaac tcatcggctg cgaagcggtg cgcgtggcgg gcaacagcgc
     3541 gctcgacatc ggaccagtag agggcaacca caccggcgca ggcattgaaa gcgtcggcac
     3601 cttcgaccgc ctgcagatcg tcggcaacac ggtgcggcgc agccagacgc agacgaagct
     3661 gatcgacggc gcccaatggt acgccgtggt gatctccggc gcgcgcaccg tgccgccgcg
     3721 gctgcgggcg tttaccaact tttttgccgc caagtccaat acgtccttta tcctgagcga
     3781 tgtaaaagtc attgcccggc cgctgggacg ggagttggtg agcttgcacg ataatcattt
     3841 cgacgcctac ggcgcagcgc aggcggtctt gatcgcgatc agcggcgctt gtacgtttaa
     3901 cgataaccgc tgcctgttgc tggcgttgg
//
LOCUS       DATIRS010000154         1527 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1388317, whole genome shotgun sequence.
ACCESSION   DATIRS010000154 DATIRS010000000
VERSION     DATIRS010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1388317"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..328
                     /locus_tag="VLM90_01935"
     CDS             <1..328
                     /locus_tag="VLM90_01935"
                     /inference="COORDINATES: protein motif:HMM:NF020252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HDOD domain-containing protein"
                     /protein_id="HSQ11741.1"
                     /translation="VIEAEREVYGVDHALMGHTILNRWNLDGQIIHATLKHHGDGASN
                     NELANLLTVADYLSSRCNLGFFTEPTPPPEQLLSRCGLGDEAAIAELLEELAQAHRQE
                     SLLFEK"
     gene            complement(482..1372)
                     /locus_tag="VLM90_01940"
     CDS             complement(482..1372)
                     /locus_tag="VLM90_01940"
                     /inference="COORDINATES: protein motif:HMM:NF040043.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6282 family protein"
                     /protein_id="HSQ11742.1"
                     /translation="MTLYDDMMEGVIDVHCHIDFEFSAKERKREPEFLWLPKAEAMGM
                     RGVVLKSHWWPTVNVTPYILSSVQTNVALWSSVALNLTAGGPNPCIVDACAALGGKMI
                     FLPTWSARNDVERKGFSSRIKSYYANHAKLENPNYYFLDDQGRLIKSGYEIIECCKAH
                     DLTLGMGHVSWQESLAFIAAARDMGYSHRLVVNHVQSHIIAMPVDAMKKAAEMGAFLE
                     ACWNALAPGRMDSPELVAQFRQVGLRQIVASTDYFRPYSPNPAELFRMYLGMLHEGGL
                     SKGEVNQVASINPARLMGMA"
BASE COUNT          313 a          433 c          461 g          320 t
ORIGIN      
        1 ggtcatcgaa gccgagcgcg aagtgtacgg cgtcgatcac gcgctcatgg gccacacaat
       61 actcaaccgc tggaacctcg acggccagat catccacgcg acgctgaagc accatggcga
      121 cggcgccagc aataatgaat tggcgaatct gttgactgtc gccgattatc tcagcagccg
      181 gtgcaatctg ggatttttca ccgaaccgac gccgccgccc gagcagttgc tctccaggtg
      241 cggcttgggc gacgaggccg cgatcgctga gctgcttgag gagctggcgc aggcgcatcg
      301 tcaggaaagc ctgctcttcg aaaaatgatt cgagtgcgcc cccgcctttg acatctgccg
      361 gactaaccct gcgcgtttga ttgctctgaa gcagcgaatc tttaccggat catgatcgaa
      421 acgcgccggg ttcgatgacg agagatggtt gcttggaatg atgatcggtt agccgaagct
      481 tttacgccat gcccatgagc cgcgccggat tgatcgacgc gacttgattg acttcgccct
      541 tgctcaagcc gccttcgtgg agcatgccca agtacattct aaatagctcg gcaggattgg
      601 gactgtaggg gcggaagtag tcggtgctgg cgacgatctg gcgcagtccg acttggcgga
      661 actgggcgac caattccggc gagtccatgc gtccgggtgc cagcgcattc cagcaggctt
      721 cgaggaatgc gcccatctcg gcggcttttt tcatggcgtc caccggcatg gcgatgatgt
      781 ggctctgcac atgattgacc accagcctgt ggctgtagcc catatcgcgc gcggctgcga
      841 taaaggcgag agattcctgc cacgatacat ggcccatgcc gagggtcaga tcatgggctt
      901 tgcagcactc gatgatctca tagccgcttt tgatcagcct gccttggtcg tcgagaaaat
      961 aatagttggg gttttctaac ttagcgtggt tggcgtagta ggacttgatg cggctgctga
     1021 agcctttgcg ctcgacgtcg ttgcgcgcgc tccacgtcgg cagaaaaatc atcttgccgc
     1081 cgagggcggc gcaggcgtcg acgatgcacg gattcggtcc gccggcggtc aggttcagcg
     1141 cgacgctcga ccacagcgcg acgttggttt gcaccgagga caaaatgtac ggcgtgacgt
     1201 tgaccgtcgg ccaccagtgg gatttcagca cgacgccgcg catgcccatg gcctcggcct
     1261 tgggcagcca gagaaactcc ggctcgcgct tgcgctcctt ggcggaaaac tcgaaatcga
     1321 tgtggcagtg aacgtcgatg acgccttcca tcatgtcgtc gtacaaggtc atgctaactc
     1381 cttgggaaaa tatcggagga ttggccgcaa aaaacgcaaa gggcacaaag ttagaaacaa
     1441 aaaatctttt gccccagcgg gatcttggtt aagccgccgg tctgacgcca ccgcagcagc
     1501 gtttgtactt tttgccgctg ccgcagg
//
LOCUS       DATIRS010000155         1532 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_700161, whole genome shotgun sequence.
ACCESSION   DATIRS010000155 DATIRS010000000
VERSION     DATIRS010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1532
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_700161"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..653
                     /locus_tag="VLM90_01945"
     CDS             <1..653
                     /locus_tag="VLM90_01945"
                     /inference="COORDINATES: protein motif:HMM:NF015706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11743.1"
                     /translation="AYRETITQPATGKEIFKKQTGGRGQYAHVELEIEPAPGEGFVFE
                     SKITGGAIPREFIKPTEQGIHDAMERGYLAGYDLVDIRVRLVDGGFHEVDSDERAFII
                     AGSLAFQDAVRKAKPVLLEPIMRIEVVTPEDYMGAVNGDLNRRRGQIEKMEPRPGGAQ
                     VITAFVPLSEMFGYTTDLRSATQGRATSTMHFERYDQAPKNVAEEVIAKVQGVASK"
     gene            724..>1532
                     /locus_tag="VLM90_01950"
     CDS             724..>1532
                     /locus_tag="VLM90_01950"
                     /inference="COORDINATES: protein motif:HMM:NF000766.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HSQ11744.1"
                     /translation="MSKEKFDRSKPHVNIGTIGHVDHGKTTLTAAITKVLAKNNPKVQ
                     FVAFDQIDKAPEEKARGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDG
                     AILVVAATDGPMPQTREHILLARQVGVPAMVVALNKVDAVDDPELLELVELEVRELLS
                     AYEFPGDDIPVVKVSALKALEGDETWEKTVLELMDAVDSYIPTPARDIDKPFLMPVED
                     IFTIQGRGTVATGRVERGKVKVNEAVEIVGIRPTTKTVVTGVEMFKKLLEEG"
BASE COUNT          356 a          368 c          524 g          284 t
ORIGIN      
        1 tggcttatcg cgagacgatt acgcagccgg cgaccggtaa agagattttc aagaagcaaa
       61 ccggcggtcg cggccagtac gcgcacgtgg aattggaaat cgagccggcg cctggcgaag
      121 gcttcgtgtt cgaaagcaag attaccggcg gcgcgattcc gcgcgagttt atcaagccca
      181 ccgagcaggg cattcacgac gcgatggagc gtggttatct cgccggctat gacctggtcg
      241 acattagagt gcgactggtt gatggcggat tccacgaagt tgactcggac gaacgagctt
      301 ttatcattgc cggctcgttg gcattccagg atgcagtcag gaaggccaag ccggtcttgc
      361 tggagccgat catgcggatc gaagtggtga cgcctgaaga ttacatgggc gccgtgaacg
      421 gcgacttgaa tcggcggcgc ggacagatcg aaaagatgga accgcgaccc ggcggcgcgc
      481 aggtaatcac tgcgttcgtg ccgctttcag aaatgtttgg atatacgact gacttgcgct
      541 cggcaacgca gggtcgcgcg acttcgacga tgcactttga gcgatatgat caggcgccaa
      601 agaacgtcgc cgaagaagtg atcgcgaagg ttcagggagt ggcaagcaag taaagtttag
      661 cggcgggcgt tgcccgccga agagcggacg agggcgtccg cgctccaatt agaggcagca
      721 aagatgagca aagagaaatt tgatcgcagt aagccgcacg tgaacatcgg gacgattggg
      781 cacgtggacc atggcaagac gactttgacg gcggccatca cgaaggtatt ggcgaagaac
      841 aatccgaaag tgcagtttgt ggctttcgat cagattgata aggcgccgga agagaaagcc
      901 agaggcatca cgatcgcgac ggcgcacgtt gagtacgaga cggctaagcg tcactacgcg
      961 cacgttgact gtccgggtca cgccgactat gtgaagaaca tgattaccgg cgcggcgcag
     1021 atggacggcg cgatcctggt ggtggccgca accgacggtc cgatgccgca gaccagagag
     1081 cacatcctgc ttgctcgcca ggtgggcgtg ccggcgatgg tggtggccct gaataaggtc
     1141 gatgcggttg acgatccgga gttgctcgag ctggtggaac tggaagttag agaattgctc
     1201 agcgcttatg aattcccggg tgacgacatt ccggtggtga aggtctcggc cttgaaagct
     1261 ctggaaggcg atgagacatg ggagaagacg gtcctggagt tgatggacgc ggttgactct
     1321 tatattccga cgccggcgcg tgacatcgac aagccgtttt tgatgccggt ggaagacatc
     1381 ttcacgattc agggccgcgg tacggtggcc acgggaagag ttgagcgcgg caaggtgaaa
     1441 gtgaacgagg cggttgagat cgtcggcatc cggccgacca cgaagacggt ggtgacgggc
     1501 gttgagatgt tcaagaagct gctggaggaa gg
//
LOCUS       DATIRS010000156         2089 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_995299, whole genome shotgun sequence.
ACCESSION   DATIRS010000156 DATIRS010000000
VERSION     DATIRS010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2089
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_995299"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..602
                     /locus_tag="VLM90_01955"
     CDS             <1..602
                     /locus_tag="VLM90_01955"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSQ11745.1"
                     /translation="LCTEQIAGPLNDKQAELMQAAREDCDRLQAMVDDLLDLSRIESG
                     KVELYPLPTPVSTLIEAAVEQHKGEAEAKNVRLGADKSLSEGRVLADHERIVHVFSNL
                     ITNALRYTPPDGAVTLGASLINGAVRFTVADNGRGIPKEYQERVFEKFFQVPDAEPKG
                     TGLGLYIAKEIVRGHGGEIGVDSEPGKGSVFWFTLPRIK"
     gene            complement(620..1951)
                     /locus_tag="VLM90_01960"
     CDS             complement(620..1951)
                     /locus_tag="VLM90_01960"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSQ11746.1"
                     /translation="MLVIDDEKNIRATLALCLEQAGCQVTAAPSPESALSALAQQAHE
                     LAFLDLRLGSSNGLDLIPRLLAESPNLMIVVMTAYATIDSAVEAIKRGASDYLPKPFT
                     PAQIRHVVDQSLKQRDLKRHVMDLEGRLREAAPETDLETDSPKLRAVFEVAAKASSSD
                     APVLLRGESGTGKSVLARWIHSLSPRSRQPFVVVNCPTLSEELLTSELFGHAKGAFTG
                     AVRDQPGRVEAAEGGTLFLDEIGDISPALQAKLLRFLEEKEFERLGENKTRHANVRTI
                     AATNRELADQVRKGLFREDLLYRLNVIDLQLPPLRERSEDILRLARRFLSFFAMSARR
                     QTPELSKSAADALTSYQWPGNVRELRNTIERAVILWPAQVIEPEAFPTHISARARSPE
                     TAQIGGNFSLDAVEREHITRVVARTPTLDDAAAILGIDASTLWRKRKKFES"
BASE COUNT          412 a          598 c          666 g          413 t
ORIGIN      
        1 atctctgcac cgagcaaatc gccgggccgc tcaacgacaa gcaggcggag ctaatgcagg
       61 ccgcgcggga agattgcgac cggctgcaag cgatggtcga cgacctgctg gacctatcgc
      121 ggatagagtc cgggaaggtc gaactttacc ctctgccgac gccggtctcc acgctcatcg
      181 aggcggccgt ggaacagcat aaaggggagg cggaggctaa gaacgtgcgc ctgggcgccg
      241 ataaatccct gtccgaagga agagtcctgg ccgatcacga gcgaatcgtc catgtgtttt
      301 ccaacctgat caccaatgcg ctgcgctata cgccgccgga cggtgccgtc accttgggcg
      361 cgagcctgat caacggcgcc gtgcgtttta ccgtggctga taacggcagg ggtatcccaa
      421 aggaatatca agagcgggtt tttgagaaat tttttcaagt gccggatgct gagcccaaag
      481 gaacgggttt ggggctctat atcgccaaag aaatcgtccg cggccatggc ggcgagatcg
      541 gcgtggatag cgaacccggc aagggcagcg ttttttggtt cacgctgccc cggataaaat
      601 aaaccgcgca gccagcctat tagctttcaa attttttgcg cttgcgccaa agcgtcgagg
      661 cgtcgatgcc gagaatcgcg gcggcgtcat ccaaggtcgg cgtgcgggca accacgcgag
      721 tgatgtgctc acgctcgacc gcatcgagag aaaagttgcc gccgatctgc gccgtctccg
      781 gcgatctcgc acgcgcggaa atatgcgtcg gaaacgcctc cggctcgatc acctgggcgg
      841 gccaaagaat cacggctctt tcgatggtgt ttcttagctc gcggacattg ccgggccatt
      901 ggtaagacgt cagagcgtcg gcggccgatt tcgacagctc gggtgtctgg cggcgcgcgg
      961 acatagcgaa gaacgaaaga aaacgccgcg ccaagcgcag aatatcctcg ctccgctccc
     1021 gcagcggcgg caattgcaag tcgatgacgt tcagacgata gagcagatcc tcgcgaaata
     1081 gacctttgcg aacctgatcc gccaattcgc ggttggtcgc ggcgatggtg cgaacgttgg
     1141 cgtgccgggt tttgttttcg ccgagccgct cgaattcttt ttcctcaaga aagcgcagaa
     1201 gcttggcttg cagcgctggc gagatgtcgc cgatctcgtc gagaaaaagt gttccgccct
     1261 cggctgcttc gactcgcccc ggctggtcgc gcacggcgcc ggtgaaggcg cctttggcgt
     1321 ggccgaaaag ttcgctcgta agcaattcct cggacaaggt cggacagttg accacgacga
     1381 acggttggcg gctgcgcgga ctgagcgaat gaatccagcg cgccagcacg ctcttgccgg
     1441 tgccgctttc gccgcggagc agcaccggcg cgtctgaact ggacgctttc gcggcgactt
     1501 caaaaaccgc gcggagcttg ggcgagtccg tttccagatc ggtctccggc gcggcttcgc
     1561 gcagccgtcc ttccaaatcc atcacatgtc tcttcagatc gcgctgtttg aggctctgat
     1621 cgacgacgtg gcgaatctgc gcgggcgtaa acggcttggg cagataatca ctggcgcccc
     1681 gcttgatcgc ttccacggcg ctgtcgatgg tcgcgtaggc ggtcatgacg acgatcatca
     1741 gattggggga ttcggcgagc agtctcggga tcaggtcgag accgttggaa cttcccaagc
     1801 gaaggtcgag gaaagccagc tcgtgcgctt gttgcgcgag cgcgcttagg gcgctttcgg
     1861 gagacggcgc cgcggttacc tggcagccgg cttgctcgag gcacagcgct agcgtcgctc
     1921 gaatattttt ttcatcgtcg atgacgagca cgcggagttt tggctctgga gttggagtag
     1981 aggaggtcac gaggaatgct cttctttggc actatgatac ccgtaagttt tcgatgcaag
     2041 cgatgcacag agcggcggca gaacccgccg ccggcgctgt ttctcgaat
//
LOCUS       DATIRS010000157         1777 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_405318, whole genome shotgun sequence.
ACCESSION   DATIRS010000157 DATIRS010000000
VERSION     DATIRS010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1777)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1777)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1777
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_405318"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..689
                     /locus_tag="VLM90_01965"
     CDS             <1..689
                     /locus_tag="VLM90_01965"
                     /inference="COORDINATES: protein motif:HMM:NF013292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="isoaspartyl peptidase/L-asparaginase family
                     protein"
                     /protein_id="HSQ11747.1"
                     /translation="EDNPLFNAGTGSTLNSLGQVEMDAAIMAGDGLRAGAVAAVTGIK
                     NPIALARRVLEDGRHVLIAGEGAALFARGIGFPECAPASLIVASEKQRWDNKHGTVGC
                     VAFDQNGKLAAATSTGGIFNKLPGRVGDSPLIGCGTYANRVGAVSCTGYGEAIIRATL
                     ARDAVQLLQGGSEPSEAAGLALANLAALTGSSAGLILIDSHGRVGYARNTTHMPVCYV
                     TVGSDPKTAV"
     gene            872..>1777
                     /locus_tag="VLM90_01970"
     CDS             872..>1777
                     /locus_tag="VLM90_01970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11748.1"
                     /translation="MAQTRIICLVGMHRSGTSMIARLLNICGLDLGPPERLLKADKAN
                     PLGHFEHRGFLDIDRKLLKHFHATWHNPPDLPPSWETDPGLLPLLRQARALAASFPQE
                     KSWGWKEPRASLFLPFWRQAVPNMRFLLCLRNPLEVAESLQKRNRMAIEHGAWLWYLY
                     TLSSLRDTQRCPRQFSFFDDYFARRDEEIARVLDFCGLGTFNDTAVHESAIAGEFRHH
                     DSGDRRLRDEPAVPAQCKDLYFGLRSILAAQEQRSEVSNAADGAVGSSALDSFIATFT
                     SQAGFQYLSQRHLAAAKGLGSGKRIK"
BASE COUNT          352 a          506 c          534 g          385 t
ORIGIN      
        1 ttgaagacaa tccactattt aacgccggta cgggatcgac cctgaacagc ttgggccagg
       61 tcgagatgga cgcggcgatc atggcaggag acgggctgcg cgccggggct gtggcggcgg
      121 tcacgggtat caagaatcca attgcgctgg cgcggcgcgt gctcgaagat ggccggcatg
      181 tcctgatcgc cggcgaaggc gcggcgttgt tcgcccgcgg tatcggattt ccagagtgcg
      241 ctcccgccag cttgatcgtc gcgagcgaaa agcagcgctg ggacaacaag catggcaccg
      301 tcggttgcgt tgccttcgat cagaacggta aactcgccgc cgcgacttcc accggcggta
      361 tcttcaacaa actacccggc cgggtcggcg actctccgct catcgggtgc ggcacttacg
      421 cgaacagagt cggcgcggtc tcatgcaccg gatacggtga agcgattatc cgggcaacgc
      481 tggcgcgcga cgcggtgcag ttgctccagg gcggcagcga acccagcgaa gccgccggtt
      541 tggcactggc aaatctagca gcgctgactg gcagcagcgc cggcctgatt ctcatcgaca
      601 gtcacgggcg agtcggctat gcgcgtaaca cgacgcatat gccggtatgt tatgtcactg
      661 taggaagcga ccctaaaacg gctgtgtgag ggatgagagt cggcggtttg gcagactgat
      721 gattttaacg gtgaccattg tcctggaatc tctcgtcatg ggaacaaccc ggccaaggct
      781 attcattgca tgctgaaatg gaaaatattt acatcgatag tatagtaacc actcgtcgct
      841 tggtatttcg gcagttggtt taaccacgca aatggctcaa acccggataa tttgtcttgt
      901 cggcatgcat cgcagcggca cgtcgatgat cgcgcgtctg ctcaatattt gcggtttgga
      961 tctggggccg ccagagcgct tgctcaaggc tgacaaggcc aatccgttag gccacttcga
     1021 gcatcgtgga tttctcgata tcgaccgcaa gctgctcaaa cactttcacg ccacctggca
     1081 taatccgccg gatttgccgc caagctggga aaccgatccg ggcctgctcc cgctgctgcg
     1141 ccaagcccgc gccttagcgg cgagttttcc acaagaaaag tcatggggct ggaaagagcc
     1201 gcgggcgtct ttgttcttgc cattttggcg ccaagcggtt cccaacatga gatttctttt
     1261 gtgcctgcgc aatcctctgg aggtcgccga gtcattgcag aagcgcaacc ggatggcgat
     1321 cgagcatggc gcctggcttt ggtatttgta taccttgtcc tccttgcgcg acacgcagcg
     1381 ctgcccccgg cagttttctt tttttgacga ttatttcgcg cgtcgggatg aggagatcgc
     1441 gcgggtgctc gacttctgcg gtctcggcac cttcaacgat accgcagtcc atgaatccgc
     1501 catcgcaggc gaatttcggc atcacgacag tggcgatcgg cgattgcgtg acgagcccgc
     1561 cgttccggcc caatgcaagg atctttactt cggtctccgg tcgattctcg cggcccagga
     1621 acagcgcagc gaagtttcca acgcagctga cggggcggtg ggatcgtcag cgctagattc
     1681 ctttatcgcg acattcacct ctcaagcggg atttcagtat ttgtcacagc gccaccttgc
     1741 cgctgccaag ggtctgggta gcggtaaaag gattaag
//
LOCUS       DATIRS010000158         1635 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_896775, whole genome shotgun sequence.
ACCESSION   DATIRS010000158 DATIRS010000000
VERSION     DATIRS010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1635)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1635)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1635
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_896775"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..451)
                     /locus_tag="VLM90_01975"
     CDS             complement(<1..451)
                     /locus_tag="VLM90_01975"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HSQ11749.1"
                     /translation="MAKMRVAQVTRPNGPLEIVEREIPQPGAGSVRVKVEACGVCHSD
                     SFTKEGAWPGIQYPRVPGHEVAGIVDALGTGFVGWTVGQRVGVGWHGGNCGYCDSCRR
                     GDFVTCQIAFQVPGIAYDGGYAEYTIAPAGALALIPDGLSAVDVAPLM"
     gene            complement(477..1535)
                     /locus_tag="VLM90_01980"
     CDS             complement(477..1535)
                     /locus_tag="VLM90_01980"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HSQ11750.1"
                     /translation="MRYKTFGRRTGLRVSELALGAGNFGTRWGHGAERAEAKKVFDGY
                     VEAGGNFIDTADSYQFGESEELVGDFIAPDRDSFVVATKYTLGTTASEGISRTGNSRK
                     NMVRSVEGSLKRLKTDRIDLYWAHFADATTPIEEILRGFDDLVRAGKILYAGLSNFPA
                     WRVARGDLLAELRGWSPLAGIQIEYSLAERTADRELLPMAEALGLGVALWSPLGGGFL
                     TGKYRQSDAGRINSVLARLVHTEKTARESAILDAVMAVAKDGGTSPTEVAIAWLLHNA
                     RESTTALIPILGPRTLEQLAGTLSALNLQLAENQLARLSEASQVALGTPHEQTQGSRA
                     AISGNQPEQLEPSKVPIA"
BASE COUNT          319 a          517 c          480 g          319 t
ORIGIN      
        1 acatgagcgg cgcgacatcg acggctgaaa gtccgtccgg aatcagcgcc aatgcgccgg
       61 ctggagcgat cgtatattcg gcgtagccgc cgtcgtaggc gatgccgggc acttgaaagg
      121 cgatttggca cgtaacaaaa tcaccgcgcc ggcaggagtc gcagtaaccg cagttgccac
      181 cgtgccaacc gactccgacc cgctggccca ctgtccagcc aacgaagcct gtccccagcg
      241 catcgacaat tccggcgacc tcatgtccag gcacccgcgg gtattgaata cccggccagg
      301 cgccttcctt tgtaaaagaa tcgctgtgac aaacgccgca agcttcaacc ttgacgcgca
      361 ccgaaccggc gccgggttgc gggatttcgc gttcaacaat ttccaagggt ccattgggac
      421 gagtcacttg tgctacacgc atctttgcca taattcctcc tcgatttatg ccaacctcaa
      481 gcgatcggga ccttcgacgg ttccagctgc tcgggctggt ttcctgaaat tgcggctcga
      541 gaaccctggg tctgctcgtg cggtgtgccg agcgcaacct gactggcctc actgagtcgc
      601 gcgagctgat tttccgcgag ttgtaggtta agggcgctta gcgtccccgc gagttgttca
      661 agcgtgcgcg gaccgaggat tggaatcagc gccgtcgtcg attctcgcgc gttgtgcagc
      721 agccaggcga tggcgacctc cgtcggcgac gttccaccat ccttcgccac cgccatcacc
      781 gcatcgagga tcgcgctctc gcgcgccgtc ttctcggtgt ggaccaacct ggcaagcacc
      841 gagttgatgc gccccgcgtc gctctggcga tatttgccgg tgagaaatcc gccgccgagg
      901 ggcgaccata gcgcgactcc caagccgagc gcttcggcca tcggcaatag ctcgcgatcc
      961 gccgtgcgct cggcaaggct atactcgatc tgaatgccgg cgagcggcga ccagccgcgc
     1021 aattccgcca agagatcgcc gcgggcaacc cgccaggcgg gaaagttgga cagaccggcg
     1081 tagagaatct tgccggcgcg caccaggtcg tcgaagccgc gtaagatttc ttcaatcgga
     1141 gtcgtggcgt cggcgaagtg cgcccagtaa agatcgatgc gatcggtctt gagccgtttg
     1201 agactgccct cgacggaacg caccatgttc ttgcggctgt tgccggtgcg tgaaatgccc
     1261 tcactggcgg tggttcccaa ggtatatttc gtggcgacga cgaaagaatc gcgatccggc
     1321 gcgataaaat caccgaccaa ctcctcggac tcgccgaact ggtagctatc ggcggtgtcg
     1381 ataaagttgc cgccggcttc gacgtagcca tcgaagactt ttttcgcttc cgcgcgttcg
     1441 gcgccatggc cccagcgggt gccgaagttg ccggcgccca aggcaagctc ggatacgcgc
     1501 aagccggttc ggcgtccaaa ggttttgtat cgcatgagat ttctccttga ccaaatctcc
     1561 acggcctctc gactttgcat ggaaaaccgc ttcggccgag tagcaatcaa tgcagcgctc
     1621 tagccaaaca acttg
//
LOCUS       DATIRS010000159         2059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_602006, whole genome shotgun sequence.
ACCESSION   DATIRS010000159 DATIRS010000000
VERSION     DATIRS010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_602006"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1936)
                     /gene="purL"
                     /locus_tag="VLM90_01985"
     CDS             complement(<1..1936)
                     /gene="purL"
                     /locus_tag="VLM90_01985"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HSQ11751.1"
                     /translation="MAEAGRENKLSQPAVTPELVASHGINPDEYRKIIEFLGRAPNYT
                     ELGVFSVMWSEHCSYKSSRVYLKNLPTEGPYVLQGPGENAGVVDIGDGLAVAFKMESH
                     NHPSFIEPYQGAATGVGGILRDIFTMGARPIASLNSLRFGAIDHPRTRYLVAGVVAGI
                     GGYGNCIGVATVGGECYFDDCYNANILVNAFSLGLVDKQRIFTGLAQGIGNPVMYVGS
                     KTGRDGIHGATMASESFSEEKEQRRPTVQVGDPFTEKLLLEACLELFQHDYIVGIQDM
                     GAAGLTSSSTEMAGRGGCGIELDLSRVPMREDGMTPYEILLSESQERMLLVAKQGSEI
                     DIKKIFDKWDLDAVVVGRVTDDQQFRTFWDGEEVACMPIAALTKEAPVYHRPTARPAY
                     QDQVQQLDLATIAEPKDFGAVLKQLLASPNLASKEWIYRQYDQYVRTNTIVAAGADAA
                     VIRVKGTEKGLALVADGNSRYCYLDPYVGGVLAVAEAARNLACVGARPVGLTDCLNFG
                     SPENPEVMWQFAEVIHGMRVACLSLHVPVVSGNVSFYNETDGVPIHPTPIIGMVGLLE
                     KVERFVTPWFKAAEDVVILLGRTREELGGSEYLKTIHGLTRGTPPWIDLKLELAVQNC
                     CIDAIEQGLLQSAHDVSDGGL"
BASE COUNT          429 a          635 c          584 g          411 t
ORIGIN      
        1 ccaggccgcc gtcggataca tcatgggccg attgcagaag cccctgctcg atggcgtcga
       61 tgcagcagtt ttgcaccgcc aattccaact tgagatcgat ccagggcggc gttccgcggg
      121 ttaggccgtg aatggttttc aaatactcgc tgccgcctag ttcttcccgg gtacgcccga
      181 gcaatatgac gacatcttcg gcggccttga accacggcgt gacgaagcgt tcgacttttt
      241 ccaacaaccc gaccatgccg atgattggcg tcggatggat cggcacaccg tcggtttcgt
      301 tgtagaaact gacgttgccg ctcaccaccg ggacgtgcaa cgataaacaa gcgacgcgca
      361 tgccgtgaat cacctcggcg aattgccaca tcacttcagg attctccgga ctgccgaagt
      421 tcaagcaatc ggtcagtccc accggacggg cgccgacaca ggcaagatta cgcgctgcct
      481 cggcgacggc gagaacgccg ccgacatagg gatcgagata gcagtagcgg ctattgccgt
      541 cagcaaccag agccaaaccc ttttccgtac ccttgacgcg aatcaccgcg gcgtcggcgc
      601 cggcggcgac aatggtatta gtccgcacat actggtcgta ctggcgatag atccattcct
      661 tcgaagccag gttgggcgag gcgagtaatt gcttcaacac cgcgccgaaa tctttcggct
      721 cagcaatcgt cgctaaatcc aactgctgca cttgatcttg ataggccggc cgggcggtgg
      781 gccgatgata caccggcgct tccttggtca gcgcggcgat cggcatgcac gccacctctt
      841 cgccgtccca aaacgtgcga aactgctggt cgtcggtaac ccggcccacc accacggcat
      901 ctaaatccca tttgtcgaag atttttttga tgtcgatttc gctgccctgc ttggcgacca
      961 agagcatacg ctcttgggac tcggacaaga gtatctcata gggcgtcatg ccgtcctcgc
     1021 gcatcggcac ccgtgataga tcgagctcga tgccgcagcc accgcggccg gccatttcgg
     1081 tggaagagct cgtcaagccc gccgcgccca tgtcttgaat gccgacgatg tagtcgtgct
     1141 ggaataattc cagacaagct tcgagcaata atttctcggt aaacggatcg cccacctgca
     1201 cggttggccg gcgctgctct ttctcctcgg aaaacgactc cgacgccatg gtcgcgccgt
     1261 gaatgccgtc gcggccggtc ttcgagccga catacatcac cggattgcca atcccttggg
     1321 cgaggccggt aaaaatccgc tgcttgtcga ccaggccgag agaaaaagcg ttgacgagaa
     1381 tgttggcatt gtaacaatcg tcgaagtaac actcgccgcc gactgtggcc acgccgatgc
     1441 aattaccata accgccgatg ccggcgacca cgccggcgac aagatagcgc gtgcgcggat
     1501 gatcgatggc gccgaagcgc agcgaattga gcgaagcgat gggccgcgcg cccatggtga
     1561 aaatatcgcg caggatgccg ccgacgccgg tggccgcgcc ctggtagggc tcgatgaacg
     1621 acggatggtt atggctttcc attttaaatg ccacggccag gccgtcgccg atgtcgacta
     1681 cgccggcgtt ttcacccggc ccttgcagca catagggccc ctcagtgggc aggtttttca
     1741 gataaacgcg cgagctcttg tagctacagt gctccgacca catgaccgag aatacgccca
     1801 actcggtgta gttgggcgcg cggccgagaa actcgatgat cttgcgatac tcatcgggat
     1861 tgatgccatg gctcgcgact aattccggcg tcaccgccgg ctgggacaat ttattttcgc
     1921 gccccgcctc agccatggcg cttcacccct tcggccaccg cggcgacgat cgataagaaa
     1981 agctttgcgc catcgtcgct gccgagtaat ttattacagg cgtcttccgg atggggcatc
     2041 aaaccgaaga cgttgcgtc
//
LOCUS       DATIRS010000160         3475 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1093697, whole genome shotgun sequence.
ACCESSION   DATIRS010000160 DATIRS010000000
VERSION     DATIRS010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3475)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3475)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3475
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1093697"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1076
                     /locus_tag="VLM90_01990"
     CDS             <1..1076
                     /locus_tag="VLM90_01990"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HSQ11752.1"
                     /translation="TGMGFEFRVNKLESERRRISAAMLKLAAMARAKISRFARSDAQA
                     GQIPDRIAAQPESGPADRNSKPETFFDSDFLRRLERLHLIAKRLSWAGAKGEHAVSRK
                     GFSLEFSDYRRYQRGDDLRYIDWNIYRRLDRLLLKVFTAEEEMNIYLLVDTSRSMAEG
                     SRAKLDYAKKVAAALGYIGLKNLDRVGGAAFSSILHKPLTLGRGRKQILSMFSFLAKL
                     SCTGETNLRGAIHSFTKLFPHAGLVIVVSDLFDPDGWRAALEELSGKNYQVLLVHIVD
                     EAELKPKAWGDVALVDVEAGGERKFFLDADLVRRFEQELADYFKEIETICASRKIDYL
                     RTTTQVPFDEFVLQTLRRVSSVA"
     gene            1080..>3475
                     /locus_tag="VLM90_01995"
     CDS             1080..>3475
                     /locus_tag="VLM90_01995"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HSQ11753.1"
                     /translation="MLWGLPSALLLLAGAIPLILFLHSLKPRGLKIATTTMFIWQRVL
                     RERPLGTRLGWLLRKNLLLILQLLAALALIVALADPSLLHIGQRSGDMVVVLDISASM
                     KATGKSGSRIDGLRREFTSLINSLSSEQKMLVIGAGAEPRLMAPFTADKRRLRELART
                     LSATDGPGKIKEAILFAHGFLKRGSADHVTVISDGAFAGAEEFTTAAPHLRFAKVTGG
                     GENVGNVGIVGFEVRRQPERGAPAEILVHVRNYTAKAVRVPLALSLDDRQILRAEIDI
                     GADDRRVLIYPFDGPLAGRLVAQVDFADDFATDNRAYLAVTDTPPLRVLYVGPGNPYL
                     NNLFRFFANIELTTLPRWDDGAAQLQSKFDVVICDRVALPALTQGNFIFIDTLPVKSP
                     LVRQAALANPRLLVPLAKHPLTEGLNLADLQVREAAPLRENAAGVALARITQGPLLYA
                     FETAKLRLVYLGFDLLQSDLPLRVAFPVLFHNIFEWFQPQRLEFPGQSARAGAPFKIG
                     AAQTDAAVEITTPSGKKEMLASGGSLVFADTLEAGFYAFKDRQREGQFAVNLLDETES
                     QIVSRLNPNASTAKTDTAAWVERGWSLWPMLLGAVVLLLGAEILLAYRQGLSMYPLLM
                     RAGALAALAVALVNPRWFQPTAALDVIFGVDLSRSVGQEGQEKARAVLEFAAGLKKTA
                     TRTGLMTFGGAPEWEFPPREVIPPAEFSTHQDREQSDIQAALQGAAAQIGEGRQGRIL
                     LFSDGNENRGETARVLPLLRSQGVQVWTLPVGLSRGRNEIYLADLTLPRQVDSAESFE
                     "
BASE COUNT          639 a         1035 c         1090 g          711 t
ORIGIN      
        1 tgacgggcat gggattcgaa tttcgggtta ataagctcga atcagaacga cggcggatta
       61 gcgcggcgat gttgaagctt gctgcgatgg ccagggcgaa gatttctcgc ttcgctcgaa
      121 gtgacgcaca ggcagggcag attcccgatc ggattgccgc gcaacccgaa agcggccccg
      181 cggaccgaaa ctcgaaaccc gaaactttct tcgacagcga tttcctgcgc cggctcgagc
      241 ggcttcattt gatcgccaag cggctgagct gggcgggggc gaaaggcgag catgcggtgt
      301 cgcgcaaagg ctttagcctg gagttttccg attaccggcg ctaccagcgc ggtgacgatc
      361 tgcgctacat cgattggaat atttaccggc gtctcgatcg cttgctgtta aaagtcttca
      421 ccgccgagga ggagatgaat atttatctgc tggtcgacac cagccgctcc atggccgaag
      481 gcagccgggc gaagctcgat tacgccaaga aagtcgcggc ggcattgggc tatatcggtc
      541 tgaaaaatct cgaccgagtc ggcggcgcgg cgttctcgtc tatcttgcac aagccgctga
      601 ccttggggcg cgggcgcaag cagatcctca gcatgtttag tttcctcgcc aagctatcct
      661 gtacgggcga aaccaatctg cgcggcgcga ttcattcctt caccaagcta ttcccccacg
      721 ccggcttggt cattgtcgtc agtgatctgt tcgatcccga cggctggcgc gctgcgctgg
      781 aagaactctc cggcaagaac tatcaagtct tgctggtcca tatcgtcgac gaagccgagt
      841 tgaaacctaa agcctggggc gacgtcgcgc tggtcgacgt tgaggccggc ggcgagcgca
      901 agttctttct cgacgccgat ttggtgcgcc gcttcgaaca ggagctggcg gattatttta
      961 aagaaatcga aaccatctgt gccagccgca agatcgacta tctgcgcacg accactcaag
     1021 tgcccttcga cgagttcgtg ctccagacgc tgcgccgggt gagcagcgtg gcctgattta
     1081 tgctttgggg attgccatcc gcgctgttgt tgcttgccgg ggcgatcccg ctgatcctgt
     1141 ttctgcatag cttgaaaccg cgcggcctga agatcgccac cacgacgatg ttcatttggc
     1201 agcgggtgct gcgcgagcgg ccgctgggca cgcgcttggg ttggctgctg cgcaaaaacc
     1261 ttttgctcat ccttcaattg ctcgccgccc ttgcgctcat tgtcgccctc gccgatccgt
     1321 cgctgctcca catcggccag cgctcgggcg acatggtcgt cgtgctcgat ataagcgcga
     1381 gcatgaaggc cacgggcaaa agcggcagcc gcatcgatgg cctgcgccgg gaattcactt
     1441 cgctcatcaa tagtctctca tccgaacaaa aaatgctcgt catcggcgcc ggcgccgagc
     1501 cgcgcctgat ggcgccgttt accgccgaca agcggcggct gcgcgagctg gcgcggacat
     1561 tgtcggccac ggatggtcct gggaaaatta aggaagcgat tctgttcgct catggctttc
     1621 tcaagcgcgg cagcgccgac catgtgacgg tgatcagcga tggcgccttc gccggcgccg
     1681 aggaattcac caccgccgcg ccccatctgc gttttgccaa agttaccggt ggcggcgaaa
     1741 atgtcggcaa tgttggcatc gtcggcttcg aagtgcgtcg ccaacccgag cgcggagcgc
     1801 cggcggagat cctggtgcac gtgcgcaact atacggccaa agcggtgcgt gtgccgctgg
     1861 cgctgtccct tgacgatcgg caaatcttgc gcgccgagat cgacatcggc gccgacgatc
     1921 ggcgcgtgct aatttatccc ttcgacggcc cactggcggg aagattggtg gcgcaagtcg
     1981 atttcgccga cgatttcgcc accgacaacc gcgcttatct ggcagtaacg gacacgccgc
     2041 cgttgcgcgt gctttacgtc ggccccggca atccttatct gaacaattta tttcgtttct
     2101 tcgctaacat tgagctgact acgctgccgc gctgggatga tggcgcggcg cagctgcaga
     2161 gtaagttcga cgtggtgatt tgcgatcgcg tcgcgctgcc ggcgctgacc caaggcaact
     2221 ttattttcat cgatacgctg ccggtgaagt cgcccctggt gcgccaagca gcactggcca
     2281 acccgcggct gctcgtgccg ttggctaagc acccgctcac cgagggactc aacttggccg
     2341 acctgcaagt gcgcgaagcc gcgccgttgc gtgaaaatgc cgccggtgtc gcgttggcgc
     2401 gcataacgca agggccgctg ctctacgcat tcgaaaccgc caagctgcgg ctagtctatc
     2461 ttggctttga cttgctccag tccgatctgc cgttgcgcgt ggcgtttcca gttttgtttc
     2521 acaatatctt tgagtggttt cagccccagc gtttggagtt tccggggcaa agcgcgcgag
     2581 cgggcgcgcc gttcaagatc ggcgcggcgc aaaccgacgc cgcggtggaa atcaccacgc
     2641 cgagcggcaa aaaagaaatg ctggcgagcg gcggttcgtt ggtgttcgcc gataccctgg
     2701 aggccggttt ctatgctttc aaagaccgcc agcgcgaagg ccagttcgcc gtgaatctac
     2761 tcgacgaaac ggagtcgcag attgtctcgc gattgaaccc caatgcatcg acggcaaaaa
     2821 ccgacacagc ggcgtgggtt gagcgcggct ggtctttgtg gccgatgctg ctgggcgccg
     2881 ttgtgcttct gctcggcgcg gaaattctcc tggcttatcg ccaggggctg tcgatgtatc
     2941 cgctactgat gcgcgcgggg gcgctggcgg cgctcgctgt ggcgctggtc aatccgcgct
     3001 ggtttcagcc gaccgcggct ctggatgtga ttttcggcgt cgatctgtcg cgcagcgttg
     3061 gtcaagaggg acaggaaaaa gcgcgggcgg ttctggagtt tgccgccggc ctgaaaaaaa
     3121 ccgcgacgcg caccggactg atgacatttg gcggtgcacc ggagtgggag tttccgccgc
     3181 gcgaagtgat tccaccggcg gagttctcga cccaccagga ccgcgaacaa agcgatatcc
     3241 aagccgccct gcaaggcgcg gcggcgcaga tcggcgaagg gcggcagggg agaatattgc
     3301 tcttttccga cggcaacgag aaccgcggcg agaccgcccg ggtgctgccg ctcttgcgca
     3361 gccaaggcgt gcaggtgtgg accctgccgg tgggcttatc gcgcggccgc aatgagattt
     3421 atctggccga cctgacgttg ccgcgccaag tcgacagcgc cgagagcttc gagat
//
LOCUS       DATIRS010000161         1638 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_798524, whole genome shotgun sequence.
ACCESSION   DATIRS010000161 DATIRS010000000
VERSION     DATIRS010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1638
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_798524"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1170
                     /locus_tag="VLM90_02000"
     CDS             <1..1170
                     /locus_tag="VLM90_02000"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006635 - fatty acid beta-oxidation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HSQ11754.1"
                     /translation="TPMGRHSWIFKEVRTDDLAAYIIGKMVEKTGINKDDIEDVYFGC
                     TNQAGEDSRNVAHNASLLAGLPYTVPGATINRLCGSGLEAINQAGRAVETDHGDLFVA
                     GGVESMTRGPWVMGKPANPFQRGDIHMYDSSLGWRFPNKRMGELYSLINNGETAENVA
                     EKHNINREDQDKLALASHQKALRAQKDGRLKDEIIPFEIPQRKGAPLVHDKDEGPRSD
                     TTLEILAGLQPAFKKGGSVTAGNSSPLSDGAAALLITTPQKAEQLKLKPLARIVASAA
                     AGVHPNFMGIGPIPATQKALKRAGLTIDQIDLVELNEAFASQVLACCRELGIDLNRLN
                     VNGGAIALGHPLGCSGARMMTTLVHEMNKRGSRYGLATMCIGVGQGIATIVERVN"
     gene            complement(1361..>1638)
                     /locus_tag="VLM90_02005"
     CDS             complement(1361..>1638)
                     /locus_tag="VLM90_02005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11755.1"
                     /translation="GIDDDAAGKELAQTDAEDEFARFQDRRGGKAAVVGQAKLAHDES
                     RQPQEPDIEAVEVRAIAEQVTQFQLHLFAVLVGELFEMAAEADDRGS"
BASE COUNT          344 a          546 c          455 g          293 t
ORIGIN      
        1 acgcctatgg gccgccatag ctggattttc aaagaagttc gcaccgacga cctcgccgcc
       61 tacatcatcg gcaagatggt cgaaaagacc ggcatcaata aagacgatat cgaagacgtc
      121 tacttcggct gcaccaatca agccggcgaa gactcgcgca acgtcgcgca caacgcttcc
      181 ctgctcgccg gcctgcccta tacggttccc ggcgcaacta tcaatcgtct ctgcggctcc
      241 ggcctcgaag cgatcaatca ggcgggccgc gcggtggaaa ccgatcacgg cgacctgttc
      301 gtcgccggcg gcgtcgaaag catgacccgc ggcccctggg tcatgggcaa accggcgaac
      361 ccgtttcaac gcggcgatat tcacatgtac gacagctcgc tgggttggcg ctttcccaac
      421 aagcgcatgg gcgaactcta ttcgctgatc aataatggcg agaccgccga gaatgtcgcc
      481 gagaaacata acatcaaccg tgaagatcaa gacaagctcg cgctggcgag ccatcagaaa
      541 gcgttgcggg cgcaaaaaga cggccggctc aaagacgaaa tcatcccctt cgaaattccc
      601 cagcgcaaag gcgcgccgct ggtgcatgac aaagatgaag ggccgcgttc cgacacgacg
      661 ttggaaatcc tcgcgggtct ccaaccggct ttcaaaaagg gcggcagcgt cacggcgggg
      721 aattcctcac cgctttccga cggcgccgcg gcgctgctga tcacgacacc gcaaaaggcc
      781 gaacagttga aactcaaacc gctggcgcgc atcgtcgcct cggccgccgc cggagtgcat
      841 ccgaacttca tgggcatcgg gccgattccg gcgacccaaa aagccttgaa gcgcgccggt
      901 ctgaccatcg atcagatcga tctcgtcgag ttgaacgaag cctttgcctc ccaggtcttg
      961 gcttgctgcc gcgagttggg catcgattta aaccggctca acgtcaacgg cggcgccatc
     1021 gccctgggcc atccgctcgg ctgcagcggc gcgcgcatga tgacgaccct agtgcatgaa
     1081 atgaataaac gcggcagccg ttacggcctg gcgaccatgt gcatcggcgt cggccagggc
     1141 atcgccacca tcgtcgaacg agtgaattga gcttaaccgc gcgctcctca cgtattgccg
     1201 ccagccgggc gcgcctacgg ttatcatcca gcgccgcgat gtcaatcaac gcttcgtgct
     1261 tggcggcgct gcttttaatc agccgacctc accctgctgg cctgttcacg ccggcgccat
     1321 gagcaacctg cgcaatatca ccatcgccgt cgccgtccta ctaactgccg cggtcatcgg
     1381 cctcggccgc catttcaaac aactcgccga caagcaccgc gaacaggtgc agttggaact
     1441 gcgtcacctg ctcggcgata gcgcgaactt cgacggcctc gatgtccggc tcttgtggct
     1501 gccgggattc gtcgtgcgct aatttcgcct ggccgacgac agccgctttg ccgccacgcc
     1561 gatcttgaaa gcgcgcgaac tcatcctcgg catcagtctg cgccaactct ttaccggccg
     1621 catcgtcatc gattccgt
//
LOCUS       DATIRS010000162         1996 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_602220, whole genome shotgun sequence.
ACCESSION   DATIRS010000162 DATIRS010000000
VERSION     DATIRS010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1996)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1996)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1996
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_602220"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..887)
                     /locus_tag="VLM90_02010"
     CDS             complement(<1..887)
                     /locus_tag="VLM90_02010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11756.1"
                     /translation="MLKCFTLVAYILLSLNCASAQAPYFQGKTIKIVRGGEPGGTGDM
                     QARAVIPFLRKHIPGNPTIIVENMPGAAGRKAANHIYSTAKPDGLSIGAVGAGLVAGQ
                     ILELAGSQYDIDKLIYLGSTESGDPYVFVGRKDAGLDTLEKLRAVSGIRIGAQAVGHP
                     VYVSGRLFAYLLGLKEPRMVLGYGGPEMDIAMAKGEIDLRANGADTVLQRNKEQLEKG
                     FYQFHASISIPKGRYAVGLPKAPELESFAKSDQERQLVNLFRTFLYPRWPYLLPPATP
                     KDIAAILRGAMTKALKDPE"
     gene            complement(1040..1507)
                     /locus_tag="VLM90_02015"
     CDS             complement(1040..1507)
                     /locus_tag="VLM90_02015"
                     /inference="COORDINATES: protein motif:HMM:NF018979.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HSQ11757.1"
                     /translation="MKTNFALFLLIIFSVATVSGWGWPDIAKIMPVYVAAMPGLFMII
                     VQIYREATGWETRRSTTSIDMDESGQNQLDDATARKRTLAFFAWFIGGALGIWLIGIV
                     YALPVLVFLYALLQGKEKWLTSLIIGGCAYLVIWGLFEYMLETRWPSGILFGY"
     gene            complement(1497..>1996)
                     /locus_tag="VLM90_02020"
     CDS             complement(1497..>1996)
                     /locus_tag="VLM90_02020"
                     /inference="COORDINATES: protein motif:HMM:NF014073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HSQ11758.1"
                     /translation="GPEMIKKNPEVIYSIVWLQGISGIVGTLVGFCLATQLAKLAEVR
                     YTFMVPIMFMFILLGAFSVNRDPLDLVVVVGFGILGYFMRRAGYPRPAMILGLVLGDL
                     MEKYLYRSVASYGYSWLSRPAVIVLFIIAGGSLYLTLRGKLKASKKDSTATFSGAIAR
                     SENED"
BASE COUNT          445 a          564 c          595 g          392 t
ORIGIN      
        1 aactcaggat ctttcaacgc cttggtcatg gcgccgcgca ggatggcggc gatgtccttg
       61 ggcgtggctg gcggcaagag gtagggccag cgcgggtaga gaaatgtgcg aaacagattg
      121 accagctggc gctcttgatc gctcttggca aagctctcta gctccggcgc tttcggcagg
      181 ccgacggcat agcgcccctt gggtatcgag atcgacgcgt gaaattggta gaagcctttt
      241 tcgagctgct ccttgttgcg ctgcagtacc gtatccgcgc cattggcgcg caaatcgatt
      301 tctcccttcg ccatcgcaat gtccatttcc ggaccgccgt aaccgagcac cattctcggt
      361 tctttcaagc cgagcagata ggcgaatagc ctgccgctga catagaccgg atgacccacg
      421 gcttgggcgc cgatcctgat ccccgagacg gcgcgcagct tctcaagagt atcgagcccg
      481 gcgtccttgc gtccgacgaa cacgtaggga tcgccgcttt cggtggagcc cagatagatt
      541 agcttatcga tgtcgtattg cgagccggcc aattcaagaa tctgaccggc gaccaggccg
      601 gcgcccaccg cgccgatgga cagcccgtcg ggtttcgccg tcgagtaaat atggttggcg
      661 gctttgcgtc ccgccgcgcc cggcatgttt tcgacgatga tcgtcgggtt gccggggata
      721 tgttttctca agaagggaat gactgcgcgc gcttgcatgt caccggtgcc gccgggctcg
      781 ccgccgcgaa cgatcttgat cgtcttgccc tgaaaatagg gagcctgggc ggacgcgcag
      841 ttcaacgaaa gtaagatgta agcgacaagc gtgaaacact tgagcattaa ctactcctaa
      901 acaggttcaa aacgttcaag ccgttcaaat cgctcaagcc cccacctctg gtcctccccc
      961 gtgtcacggg ggaggatgat gcagagagct tgaacggagc gtagcggtag aacggattga
     1021 acgttttgaa cccccagtat caatagccga acaatattcc ggatggccag cgggtctcga
     1081 gcatatattc aaacaaaccc cagatcacta aataggcgca gccgccgata atcagcgatg
     1141 tcagccactt ttccttgcct tggagcagag cgtagagaaa aaccaatact ggcagagcgt
     1201 agacgatgcc gatcaaccag attcccaatg cgccgccgat gaaccaagca aagaacgcca
     1261 gcgtgcgctt gcgggcggtg gcgtcgtcca actgattttg gccgctctcg tccatgtcga
     1321 tgctggtggt gctgcggcgg gtttcccagc cggtggcctc gcgatagatc tgcacgatga
     1381 tcatgaagag ccctggcatg gcggcgacat agaccggcat gatcttggcg atgtcgggcc
     1441 agccccaacc ggacaccgtg gcgacgctga agatgatgag taagaatagc gcgaaattag
     1501 tcttcattct cagacctcgc gatcgcgccg ctgaaggttg ccgtggaatc ttttttgctc
     1561 gcttttagtt tgccacgcag cgtcagatag agtgaaccgc cggcgatgat aaaaagcacg
     1621 atgacggcgg gacggctgag ccaactatag ccgtagctcg ccaccgagcg gtaaagatat
     1681 ttttccatca gatcgcccag caccagaccc aggatcatcg ccgggcgcgg ataaccggcg
     1741 cggcgcatga aataaccgag gatgccgaag ccgacgacca cgacgagatc gagcggatcg
     1801 cggttgacgc tgaaggcacc cagcaggatg aacatgaaca tgatcggaac catgaaggtg
     1861 tagcgcacct cggcgagctt ggcgagctgg gtggcgaggc aaaagccgac cagggtgccg
     1921 acgatgccgg agataccctg aagccagacg atgctgtaaa tgacctcggg gtttttcttg
     1981 atcatctcgg gaccgg
//
LOCUS       DATIRS010000163         1689 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_798706, whole genome shotgun sequence.
ACCESSION   DATIRS010000163 DATIRS010000000
VERSION     DATIRS010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_798706"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1689)
                     /locus_tag="VLM90_02025"
     CDS             complement(<1..>1689)
                     /locus_tag="VLM90_02025"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HSQ11759.1"
                     /translation="SAPEWESPPREEIPAAEFGARLDREQTDIQSALQGAAAQIGDGR
                     QGRILLFSDGNENRGETARVVPLLRSQGVQVWTLPVGLSRGRNEIYLADLTLPRQVDS
                     AESFEIRGAVESLREAPARLRLLRDGALIAERELRLNAGTTAVSFRDTLSERGNHGYE
                     LLVESADDTLAENNLLQGVVEVKGPPRVLLLAGQKDSQRVLARVLQVQGYAVVEAAPE
                     AHALSLAELAAFDLLVLDNVPAFQLTHAKMESVEKYVRDFGGGLLVVGGSQSYGAGGY
                     YRTPLERILPVEMRPPAKLEMPHVALLFVIDKSGSMGSGAEGSTKLDLAKAAAIAAAD
                     IMNPTDQVGILAFDANWDWALPFRQVGKGEWITEKLANLQSDGGTDLYKAMVEAHRGI
                     AAKTASIKHVIALSDGLTDKADFQSLVAKMARDGITVSTVSIGNDADVKLMAEIAKEG
                     KGRGYVALDPQTIPQIFTTETLLISRDLLIEKPVAPSIVAAAGALKGIPQNNLPALRG
                     YVLTYPKPRAELLMRADKDPLLASWRYGLGRVMAFTSDLSGRWGKEWVGWSAFP"
BASE COUNT          316 a          570 c          496 g          307 t
ORIGIN      
        1 tgcggaaagg cgctccaacc gacccactct ttgccccaac gcccgctcag gtcggacgtg
       61 aacgccatca ccctgccaag tccgtagcgc caagacgcca gcagcggatc tttgtcggcg
      121 cgcatgagca actcagcgcg cggcttggga taagtgagca cgtagccgcg cagcgccggt
      181 aaattgtttt ggggaatgcc tttgagcgcg ccggcggcgg caacgatgct cggcgccacc
      241 ggcttttcga tcaataaatc gcgcgaaatc aacagcgtct cggtggtgaa gatctgcggg
      301 atcgtctgcg gatcgagggc gacgtagccg cgccctttgc cctctttggc gatctccgcc
      361 atcagcttga catcggcgtc attaccgatg gacacagtgg acacggtaat gccgtcccgc
      421 gccatcttcg ccaccagaga ctgaaagtcg gccttgtcag tcagaccatc ggatagcgcg
      481 atcacatgtt tgatcgacgc cgtctttgcg gcgatgccgc gatgggcttc gaccatggct
      541 ttgtacagat cggtaccgcc gtcggattgc agattggcca gtttctcggt gatccactcg
      601 cctttaccta cttggcgaaa cggcaacgcc cagtcccaat tggcgtcgaa ggcgagaatg
      661 cccacctgat cggtcggatt catgatatcg gcggcggcga tggcggcggc cttggcgaga
      721 tccagcttgg tgctcccttc ggcaccggag cccatgctgc cggacttatc aatgacgaag
      781 agcagcgcca catgaggcat ttctagtttt gccggcggcc gcatctccac cggcaaaatg
      841 cgctccagcg gcgtccggta atagccgccg gcgccgtagc tctgcgaacc gccgacgacc
      901 agcaatccgc cgccaaagtc gcgcacgtac ttttctacgc tttccatctt ggcgtgggtc
      961 agttgaaacg ccggcacatt gtcaagcacc aagagatcga aggcggcgag ctcggcgaga
     1021 gacaaggcat gagcttccgg cgccgcctcc accaccgcgt agccttgcac ttgcagcacc
     1081 cgagccagca ctcgctggct gtctttctgc cccgcaagca aaagcacccg cggcggccct
     1141 ttgacttcga cgacgccttg cagcaagtta ttttccgcca acgtatcgtc cgccgactcc
     1201 accaaaagtt cataaccatg gttgccgcgc tcgctgagcg tatcgcggaa ggaaaccgcg
     1261 gtggtgcccg cgttcaaacg cagctcgcgc tcggcaatga gcgcgccgtc gcgcagcaaa
     1321 cggagccgcg caggcgcctc gcgcaagctt tcgaccgcgc cgcgaatctc aaaactctcg
     1381 gcgctatcga cttggcgcgg caaagtgaga tccgccaggt aaatctcgtt gcggccgcgc
     1441 gacaacccca ccggcagggt ccacacctgc acgccctggc tgcgcaggag cggcacgacc
     1501 cgcgccgtct cgccgcggtt ttcgttgccg tcggagaaaa gcaatatgcg tccctggcgc
     1561 ccatcgccga tctgcgccgc cgcgccttgc agggcagact gaatatcggt ctgctcacgg
     1621 tcgagccgcg cgccaaactc cgccgctggg atctcctcgc gcggcggcga ctcccactcc
     1681 ggcgcgctg
//
LOCUS       DATIRS010000164         2955 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_602411, whole genome shotgun sequence.
ACCESSION   DATIRS010000164 DATIRS010000000
VERSION     DATIRS010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2955)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2955)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2955
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_602411"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..962
                     /locus_tag="VLM90_02030"
     CDS             <1..962
                     /locus_tag="VLM90_02030"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ11760.1"
                     /translation="AKPGEPLMRARIGTCAITGGFIHLYAALDNKIFEKYGVHAEHIV
                     VRGGSVAAAALAADEINFLYCNADTNIARIATGMDGKLVASPLVGLPYVVLARKDVRR
                     PADLKGKTIGVTRPGYFTYKLAKDFLKKNNLSEKDVTLAPVGGTPTERYTALAQDMFQ
                     AILIQPPLDARGKKDGFNVIYHLSDLGLPFIYSSLFSNIKTYKEKPALIQKMVAALAE
                     SVYLVEKKPEIGMASVGKTLRISDADTLQSAYDAYAKRLINRRMIVPGKMVAETIENA
                     REEGTVIRRKASEVFDNTFVENLEKSGFMKELWGGALPEERKR"
     gene            1074..2057
                     /locus_tag="VLM90_02035"
     CDS             1074..2057
                     /locus_tag="VLM90_02035"
                     /inference="COORDINATES: protein motif:HMM:NF021640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide-binding protein"
                     /protein_id="HSQ11761.1"
                     /translation="MNRAMIFIASSSEGLKITNAICRGLERELGSAAQVEPWSRKFDL
                     SATYIESLEAAVEQADFAIMVLSPDDITTSRKLKSLAPRDNVIFELGLFMGRLGRERC
                     YMVRQDNSQLKIPSDLLGIKSASFRPSRNGNWRAAIEPVCTLIAERIARLGLRPKFTA
                     ATLGHRLALGQFASRISGTWWERIHKGGSQAISLFTIGFDEASGVIQFDGRSYDSTGM
                     PVGLWQSELSRAVIHEKKLQYHWQGWLPAAPQDRRHGFGEIVFDGAVQSAEPMRTGGG
                     KFWDINETNPKQTAIRAIDLRRASAISQLDQLSKIGDHELRTLVRKTLRTW"
     gene            2164..>2955
                     /locus_tag="VLM90_02040"
     CDS             2164..>2955
                     /locus_tag="VLM90_02040"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HSQ11762.1"
                     /translation="MKIFLSYASQDAEPAKSIYFALRDQGHTVFYDRADLPAGDEFHN
                     RIRAAIEASQLLIFLISANAVDAGSYTLTELDIAEKASVKLLPVALGKLALDQLPAAL
                     KAVTFLETDGNLPATVAAAVYRIATDWRRRRVKRMIVTAAVVAATCAALYYGLKAQAS
                     NQLVGNDGAPAVMIPAGTFIWGDDSESPRRELFVDAFYLDKHEVTVARYGDFLKATGN
                     VKPPEVWDTADLKIHAGLPVVGVDWQDANSYCQWAGRRLPTDAEWE"
BASE COUNT          641 a          817 c          892 g          605 t
ORIGIN      
        1 tcgccaagcc aggggagccg ctgatgcggg cgcgcatcgg cacctgcgcc atcaccggcg
       61 gtttcattca cctctatgcc gctctcgata acaaaatatt cgagaagtat ggcgtccatg
      121 ccgagcatat cgtcgtgcgc ggcggcagcg tcgcggcggc ggcgttggcc gccgatgaga
      181 ttaattttct ctactgtaac gccgacacca atatcgcgcg catcgccacc ggcatggatg
      241 gcaaactggt cgcctcgccg ctggtgggat tgccctatgt cgtgttggcg cgcaaggacg
      301 tcaggcggcc cgccgatctc aagggcaaaa cgatcggcgt cacccggccg ggctacttta
      361 cttacaaact ggcgaaagat tttctcaaaa aaaataactt gagcgaaaaa gacgtgacgc
      421 tcgccccggt cggcggcacg ccgactgagc gttacaccgc gctggcgcaa gatatgtttc
      481 aggcgatcct gattcaaccg ccgctcgatg cccgcggcaa aaaggacggc ttcaacgtca
      541 tctaccatct tagcgacctc gggctcccgt tcatctatag ttcgttgttt agcaacatta
      601 agacctacaa ggaaaagccc gcgttgattc agaagatggt ggcggcgttg gctgagtcgg
      661 tctatctcgt cgagaaaaag ccggagatcg gcatggcatc ggttgggaag acgctacgga
      721 taagcgatgc cgatactctg caatcggcct acgatgccta cgccaagcgg ttgatcaacc
      781 ggcgcatgat cgtgccaggc aagatggtcg cggaaaccat cgagaacgcc cgtgaagagg
      841 gcacggtgat tcgccgcaag gcgagcgaag tcttcgacaa tacttttgtc gagaatctcg
      901 agaagagcgg attcatgaag gagctgtggg gcggcgcgtt gcccgaagaa aggaagcgct
      961 agttgctctc cgagtgctag acctagaggg ctgcaacccc accagctccc ctaaacagtc
     1021 gtccgccggc cggcgtaaaa gaacaaagtt tcggctggac cccgaggatg tccatgaatc
     1081 gagcaatgat ttttatcgct tcctcatccg aagggctgaa aattaccaat gcgatctgcc
     1141 ggggtttgga gcgcgagctt ggcagcgcgg cgcaagtgga gccatggtcg cgcaagttcg
     1201 atcttagcgc gacttacatt gagtctcttg aggccgcggt cgaacaggcc gactttgcaa
     1261 ttatggtgct ctcgccggac gatattacga ccagccgcaa gctcaagagc ctggcgccgc
     1321 gggataacgt gatattcgaa ctgggtttgt tcatgggaag gttggggcgc gaacgttgtt
     1381 acatggtgcg tcaggataat tcccaactca aaatcccgag cgatctgttg ggtatcaagt
     1441 cggccagttt tcgtcccagt cgtaacggca attggcgggc cgccattgaa ccggtttgca
     1501 ctttgattgc cgaacgcatc gcaaggttgg gattacggcc taaattcacc gccgcgaccc
     1561 ttggccatcg tctcgcgcta ggtcaatttg ccagtcgcat ttccgggact tggtgggagc
     1621 ggattcacaa aggcggaagt caggcgatca gtttgtttac catcggcttt gacgaagcca
     1681 gcggggtcat ccaattcgat ggaagatcct acgactcgac gggcatgccg gtgggtctgt
     1741 ggcagagcga actttcccgc gcggtcatcc acgaaaaaaa gctgcagtat cattggcagg
     1801 gctggttgcc ggcagcgccc caagatcgcc ggcatggatt cggcgaaatc gtcttcgacg
     1861 gcgcagtgca gtcggccgag cccatgagaa ccggaggtgg gaagttttgg gacatcaatg
     1921 aaaccaaccc gaaacagacc gcgatccgtg ccatcgacct acgccgcgcg agcgcgattt
     1981 cgcagctcga tcaacttagc aaaatcggcg accacgagct gcgaacgttg gtgcgcaaga
     2041 ccctgcgtac ctggtaggcg gcgcacgcgg atgacacggc aatcgataga ggaagcttgg
     2101 tgacgagccc gatcgccggg cttttactgg tttgctccta tcgggtgaaa agttagggag
     2161 gtcatgaaga tatttctcag ttacgcctcc caagatgccg agccggcgaa gtcgatttat
     2221 ttcgcgttac gggatcaggg ccatacggtg ttctatgacc gcgccgatct gccggcgggt
     2281 gacgaattcc ataaccgcat acgagcggcc atcgaagctt cgcaactctt gatatttttg
     2341 atcagtgcca atgccgtgga cgccggcagc tatacgttga cggaactcga catcgccgag
     2401 aaagccagcg tcaagctgct gccggtagcc ctcggcaaat tggctctaga tcagctgccc
     2461 gccgcgctca aggcggtcac gtttctcgaa accgacggca acttgcccgc tactgtcgct
     2521 gccgcagtgt atcgcatcgc caccgattgg cggcgccggc gggtcaaacg catgatcgtt
     2581 accgcggcag tcgtcgccgc gacctgcgcg gcgctttact atgggctaaa agctcaggcg
     2641 agtaaccagt tagtcggtaa cgatggcgca ccggcggtta tgattccagc ggggactttt
     2701 atctggggtg atgattcaga gtcgcctcgc cgtgagctgt ttgtcgatgc attctacctg
     2761 gacaagcacg aagtgaccgt ggctcgttac ggcgacttct tgaaggcgac tggcaacgtc
     2821 aaaccgcctg aagtatggga cactgcggat ctcaagattc acgccggtct gccggttgtc
     2881 ggcgtcgatt ggcaggacgc caacagttat tgccagtggg cgggccggcg tttgccgacc
     2941 gacgcggagt gggag
//
LOCUS       DATIRS010000165         2151 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1094007, whole genome shotgun sequence.
ACCESSION   DATIRS010000165 DATIRS010000000
VERSION     DATIRS010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2151
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1094007"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..220
                     /locus_tag="VLM90_02045"
     CDS             <1..220
                     /locus_tag="VLM90_02045"
                     /inference="COORDINATES: protein motif:HMM:NF012563.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008184 - glycogen phosphorylase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan phosphorylase"
                     /protein_id="HSQ11763.1"
                     /translation="QTLLTHGDYYMHLADLASYLEADQRLCQLYADSAGWARKAILNI
                     AGSGKFSSDRTIAEYAKDIWNVKPCPVE"
     gene            276..1928
                     /gene="pgm"
                     /locus_tag="VLM90_02050"
     CDS             276..1928
                     /gene="pgm"
                     /locus_tag="VLM90_02050"
                     /EC_number="5.4.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004614 - phosphoglucomutase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucomutase
                     (alpha-D-glucose-1,6-bisphosphate-dependent)"
                     /protein_id="HSQ11764.1"
                     /translation="MTIHALAGKPAPKELLVDIDKLRKEYYTGKPDITNSAERVSFGT
                     SGHRGSSLRVGFNEAHVLAITQAICEYRNSQNVNGPLYIGKDTHALSGPAFMTVLEVL
                     AANGVETMVDSVDGYTPTPVISHAILSYNRGRTSGLADGIVITPSHNPPEDGGFKYNS
                     PHGGPADTDVTRWIEDKANLLLAGELKSVARIAYEKARRAATTHNYDYVGSYVSDLGS
                     VVDMEAICGAKLKIGVDPLGGANVAYWRPIAERYGVEVEVVNTTVDPTFRFMSLDWDG
                     KIRMDCSSPHAMAKLIGLKDSFDIAFGNDTDSDRHGIVTRGAGLMNPNHYLATAIFYL
                     FTHRPGWCPDAAIGKTVVSSSIIDRVASKIGRVLVEVPVGFKWFVSGLLDGSLGFGGE
                     ESAGASFLRRDGTVWVTEKDGIIMDLLAVELMARTGRDPAEFYHGLTDQLGAPVYERI
                     DAPATAQQKAVLLNLSAKDVKATELAGDPIETILTTAPGNGAAIGGLKVVTAQGWFAA
                     RPSGTEDVYKLYAESFRGSEHLRRIQEEAQALISNALAGVAA"
BASE COUNT          478 a          606 c          652 g          415 t
ORIGIN      
        1 gcagactttg ctgacacacg gcgactacta catgcacctg gcggatctgg cttcctacct
       61 tgaggcggat caacgcctct gccagctcta cgccgactcc gcgggatggg cgagaaaagc
      121 aattttgaac attgccgggt cgggaaaatt ctccagcgac cggacgattg ccgaatatgc
      181 gaaggacatc tggaacgtaa agccctgtcc ggtggagtga aagggccagg ggcttgcagc
      241 ggacggagaa ggcgatacag aaccgaggtg attcaatgac gatccatgcg cttgccggta
      301 agccggcgcc taaggagctt ctggtcgata tagacaagct gcgaaaggaa tactacacgg
      361 gcaagccgga cataacgaac agcgcagagc gggttagttt tggcaccagc ggtcaccgcg
      421 gctcgtcact tcgcgtgggg ttcaatgagg cgcacgtttt ggcgatcact caggcgatct
      481 gcgagtaccg aaatagccag aacgtgaacg gtcctctcta catcggaaaa gatacgcacg
      541 cgctatccgg tccggcgttc atgactgtct tggaggtgct cgcggcaaac ggtgttgaga
      601 ccatggtcga tagcgttgac ggctatacgc ctacgcccgt gatctctcat gccattcttt
      661 cttataaccg tggccgaacc tcgggtctgg cggacggtat agtaattacg ccgtcgcaca
      721 atccgccgga agatggcggt ttcaaataca actcgccgca tggtggaccg gcggatacag
      781 atgtaacacg ttggatcgaa gataaagcca acctgctcct tgcgggcgag ctcaagagcg
      841 tggcgagaat cgcttacgaa aaagctcgcc gcgccgccac aacccacaat tatgattatg
      901 tcggctcgta cgtaagcgac ctgggttcgg tggtggacat ggaagcaatc tgcggcgcca
      961 agctcaagat cggcgtcgat ccgctgggcg gcgccaacgt cgcatactgg cgccccattg
     1021 cggaacgtta cggagttgag gtggaggtgg tgaacaccac ggtggacccg accttccgct
     1081 tcatgtcctt ggattgggac ggcaagatcc gcatggactg ttcctctccc catgccatgg
     1141 ctaagctcat cggactcaaa gacagcttcg acatcgcctt cggtaacgat accgacagcg
     1201 accggcacgg catcgtcact cgtggcgcag gcctgatgaa tcccaatcat tacctcgcga
     1261 cggcgatttt ttatctcttc acccatcgtc caggctggtg cccggatgcg gcgatcggca
     1321 agaccgtagt cagcagcagc atcatcgatc gcgtggcttc taaaatcggt cgcgttctcg
     1381 tcgaagtgcc ggtgggattc aagtggttcg tgtccggcct gctcgacgga tcgctgggct
     1441 tcggcggcga agaaagcgcg ggcgcttcct ttctgcggcg cgacggaacg gtgtgggtga
     1501 ccgagaagga cggcatcatc atggatcttc tcgccgtcga actgatggcg cgcacggggc
     1561 gcgatcccgc cgagttttac catggactta ccgaccagtt gggcgcgccg gtttacgagc
     1621 gcatcgacgc gcccgccacg gcccaacaaa aggcggtgct tctcaacctc tcggcgaaag
     1681 atgtcaaggc gaccgagctt gccggagacc cgattgagac catccttacc actgcacccg
     1741 gcaacggcgc ggccatcggc ggactgaaag tcgttaccgc gcagggttgg ttcgccgcac
     1801 gcccttccgg tacggaagac gtctacaagc tttacgcgga aagctttcgc ggcagcgagc
     1861 acttgcggcg cattcaggaa gaagcccaag cgctgattag taacgcgctg gcaggagtgg
     1921 cggcatgaag gcgaaaatgt tcacgaggag aattctaagc cgtcactttg ctggcgaaca
     1981 tctctgtgac cgggagagat aagcatggcg atccagcaaa tttatcttat tcgccatggc
     2041 gaaacggagt ggagtttaag cgggcagcac accggcatca ccgatatccc gctcacagag
     2101 aatggccgaa acctcgccaa acggttggcg ccggtgttag cgacagagag g
//
LOCUS       DATIRS010000166         2516 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1389089, whole genome shotgun sequence.
ACCESSION   DATIRS010000166 DATIRS010000000
VERSION     DATIRS010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2516)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2516)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2516
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1389089"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1722)
                     /locus_tag="VLM90_02055"
     CDS             complement(<1..1722)
                     /locus_tag="VLM90_02055"
                     /inference="COORDINATES: protein motif:HMM:NF039586.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HSQ11765.1"
                     /translation="MPTSSLENSVKAEEAKRRKREGIVIAVAALMVAALIFFEVQSPD
                     ISLENSLGSNIVFFFIININIILLVLLVFLVVRNLVKLVFERRRRLLGSRLQSRLVLA
                     FVALSIVPSLLLFAIAGGLLTHSFDRWFDSKVESALQGSLEIGQTYYQNSANNAMFFA
                     RRLSEKITEDKLFESARRAGLRQLVEDKQREYNLGTVEIYSAESEAIVAVSDKSKNAV
                     RLKPDGEFLARALRGVGVTWTQPLGEGDVIRGGAPIFGAQKRIVGVAVVDYHVPKSLT
                     KRAAQISQSYEQYKYLTFLKAPVKNSYILTLFLITLVIMFSATWWGFYLSKGITVPIQ
                     QLAEGTHEVAQGNWDYKIESSGDDEIGVLVQSFNQMTGDLKQITLELERRGKVVQTLL
                     ANIAAGVVSVDPAGNITTWNKAAEQMLGVKAEQALGNNYREVLQPESLRVVAEIIDSV
                     KDLEKIERDIKIPLSDRQLTAVVTAATLRDDDGSALGVMVFLEDITQIQKVQRMEAWR
                     EVARRIAHEIKNPLTPIQLSAERLRKRYASMLGGDGGILDKCTTTIIQQVEELKSLVN
                     EFSQFARL"
     gene            complement(1774..1986)
                     /locus_tag="VLM90_02060"
     CDS             complement(1774..1986)
                     /locus_tag="VLM90_02060"
                     /inference="COORDINATES: protein motif:HMM:NF022596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2905 domain-containing protein"
                     /protein_id="HSQ11766.1"
                     /translation="MAGLGKTLIYLGIVIAIVGVLMSLAGRLPWFGQLPGDFHIQRGR
                     FTFYFPLTTCVIVSAVISLVAYLLKR"
     gene            complement(2020..>2516)
                     /locus_tag="VLM90_02065"
     CDS             complement(2020..>2516)
                     /locus_tag="VLM90_02065"
                     /inference="COORDINATES: protein motif:HMM:NF017317.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Holliday junction DNA helicase RuvB C-terminal
                     domain-containing protein"
                     /protein_id="HSQ11767.1"
                     /translation="DAVALARILKRSAAILSVEQDEDGIAEIASRSRGTPRIANRLLR
                     RVRDYAPVKSDGKITKPVTVEALRMLEVDRLGLDKMDTMLLLAMIDKFAGGPVGVETL
                     AAAIGEEKDTIEDVYEPFLIQAGFIQRTPRGRVATVLAYEHFGRQPGAAKPATGKGQP
                     DLFE"
BASE COUNT          542 a          776 c          691 g          507 t
ORIGIN      
        1 cagccgcgcg aattgggaaa actcattgac caggcttttg agctcttcga cctgctgaat
       61 gatcgtcgtc gtgcatttgt ctaaaatgcc gccgtcgcca ccgagcatgc tggcgtagcg
      121 cttgcgcagc cgctcggccg acagctggat gggtgtcagg ggattcttga tttcatgggc
      181 gatgcgccgc gccacttcgc gccaggcttc catgcgctgc actttttgaa tttgcgtaat
      241 gtcttcgaga aaaaccatga cgcccagcgc cgacccgtcg tcatcgcgca gggtcgccgc
      301 cgtcaccacg gccgtcagtt gccggtcgct cagagggatc ttgatatcgc gctcgatctt
      361 ctccagatcc ttgacgctgt cgatgatctc ggccaccacc cgcagcgact ccggctgtaa
      421 aacctcacga tagttatttc ccagggcctg ctcggcttta accccaagca tctgctcggc
      481 cgccttgttc caagtggtga tatttcccgc cgggtccacc gacacgacgc cggcggcaat
      541 attggcgagc aaggtttgca ccaccttgcc gcgccgttcg agttccaagg tgatctgctt
      601 caagtcgccg gtcatctggt tgaacgactg gaccaaaacg ccgatctcat cgtcgccgct
      661 ggattcgatc ttataatccc aatttccctg ggcgacttca tgggtaccct cggcgagctg
      721 ctgaatcggc acggtgatgc ccttggaaag ataaaatccc caccaggtgg ccgaaaacat
      781 gatcaccaag gtgatcagaa acagcgtcaa gatgtaactg ttcttaaccg gcgccttgag
      841 aaaggttaaa tacttgtact gctcgtagga ctgcgagatt tgcgccgccc gtttggtcag
      901 actcttgggc acatgatagt cgaccacggc gacgccgacg atgcgctttt gcgcgccgaa
      961 gatcggcgcg ccgccgcgga tcacgtcgcc ttcgcccaac ggctgggtcc aagtcacgcc
     1021 gacgccacgc aatgcccgcg ccaagaactc gccatcgggt tttaaacgca cagcgttttt
     1081 cgacttgtcg ctgaccgcga cgatcgcttc gctctccgcc gaatagatct ccaccgtgcc
     1141 gagattgtac tcgcgctgtt tgtcctcgac gagctggcgc agcccagccc gccgcgcgct
     1201 ctcgaagagt ttatcctcgg tgattttctc actcaaccgg cgggcgaaaa acatcgcgtt
     1261 gttggcggaa ttttgataat aggtctggcc gatttccaaa gacccctgca gggcgctttc
     1321 caccttggaa tcgaaccagc ggtcgaagga atgggtcaac aagccgccgg cgatggcgaa
     1381 caacaacagg ctcggcacga tcgacagcgc gacgaaagcc aagaccaggc gcgactgcaa
     1441 gcgcgatccg agcaagcggc gacggcgctc gaagaccagc ttgactagat tgcgcacgac
     1501 cagaaaaacc aacaacacca acagaatgat gttgatattg atgatgaaga aaaacacgat
     1561 gttgctgccg agggaattct ccagcgagat gtccggtgac tgcacttcga aaaagatcaa
     1621 agccgccacc atcagcgccg ccacggcaat gacgatgccc tcgcgcttgc gccgtttggc
     1681 ctcttcggct ttaacgctgt tttcgaggct agaggttggc attagagcat tcatcggcag
     1741 cgccgaattc ccggcgagat tgctgtgaga attctaccgt ttgagcaagt aagcaacaag
     1801 cgaaataacc gcactgacaa tcacgcaggt ggtcagcgga aaatagaaag tgaagcgtcc
     1861 gcgctgaatg tgaaaatcac ccggcagttg accgaaccac ggcagtctac cggccaagga
     1921 catcagcacg ccgacgatag cgatgacgat gccaagatag atgagagtct tgcctaagcc
     1981 ggccataatt ccgatctcaa atcgcaccgt cagttaacat cattcaaaca aatccggctg
     2041 gcctttgccg gtggcgggct tggcggcgcc cggttgccgg ccaaaatgtt cgtaggccag
     2101 cacagtcgcc acccggccgc gcggcgtccg ttgaatgaac ccagcttgga ttaaaaacgg
     2161 ctcgtaaaca tcctcgatgg tatctttctc ttcgccgatg gcggcagcca aagtctccac
     2221 gcccaccggc ccgccggcaa acttgtcgat catcgccagc agcaacatgg tgtccatctt
     2281 atcgagaccc aggcgatcga cctcgagcat cctgagcgcc tccaccgtca ccggtttggt
     2341 gatcttgccg tcgcttttca ccggggcgta gtcgcgcacc cggcgcagca agcggttggc
     2401 gatgcgcggc gtgccgcgcg agcggctggc gatctcggca atgccgtcct cgtcctgctc
     2461 gacgctcagg atcgccgccg accgcttgag gatgcgcgcc aacgccaccg catcgt
//
LOCUS       DATIRS010000167         4198 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1880319, whole genome shotgun sequence.
ACCESSION   DATIRS010000167 DATIRS010000000
VERSION     DATIRS010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4198)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4198)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4198
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1880319"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..684
                     /locus_tag="VLM90_02070"
     CDS             <1..684
                     /locus_tag="VLM90_02070"
                     /EC_number="3.1.3.1"
                     /inference="COORDINATES: protein motif:HMM:NF012470.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase"
                     /protein_id="HSQ11768.1"
                     /translation="PSVFDLTQAAIRLLHGPRGFFAFIESENIDRASHANDIASVIHD
                     YREFDRAVGVAYEFYRKYSRETLIIVASDHESGGLGMTLALKDLSSTKGNNQVAGCLH
                     DFNKIRGIKISLQSAAKLLGPNPSSEAVDKLMTEHFPGFVLAPEFREKIVNNQSMSRT
                     IFAEPVANALGMMVANNTQIYWQNTAHSNHPVLVAALGVGAERFKGYYDNADFGQKLK
                     ALMEGKKQQ"
     gene            complement(704..1834)
                     /locus_tag="VLM90_02075"
     CDS             complement(704..1834)
                     /locus_tag="VLM90_02075"
                     /inference="COORDINATES: protein motif:HMM:NF014090.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005384 - manganese ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030026 - intracellular manganese ion
                     homeostasis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VIT1/CCC1 transporter family protein"
                     /protein_id="HSQ11769.1"
                     /translation="MAESSANPDAADIARYGQNYLIEMDGIELYRALAAAEKDEKRDE
                     IFRKIVRAEERHAQRWIRLIQAGGGVLPAYRRSLRVRMLGWLARRFGTDRVVPIVSAL
                     EARDEPGYLNQSEAEGLPAEERAHSRVLREMGEGPDSKGDIVGREAWHMASRGGSLRA
                     AVFGINDGLVSNFSLVMGFAGAEAKPEYILLAGCAGLLAGSFSMAAGEYVSVRAQREL
                     FEQQIAMEKQELEMSPKEEEEELALIYQAKGIPEADARMMARRIVENPRTAIDTLARE
                     ELGLDPSQLGSPWVAAGSSFGAFIVGAIMPVIPYIITRGETAFLASAILSCVALFGVG
                     ALLSIFSSRGALFSGARMLGIGLFASAITYLVGWLLGVSVTG"
     gene            1938..3146
                     /gene="ilvA"
                     /locus_tag="VLM90_02080"
     CDS             1938..3146
                     /gene="ilvA"
                     /locus_tag="VLM90_02080"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR01127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004794 - L-threonine ammonia-lyase
                     activity [Evidence IEA];
                     GO_process: GO:0006549 - isoleucine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase"
                     /protein_id="HSQ11770.1"
                     /translation="MITFVDVEEARERIKEQIYLSPLPYSETISRMTGNRVFFKLENL
                     QMTGSFKERGALNRLLTLSAEESKRGVIAASAGNHGMALAFHSHRLNIAATIVMPVFV
                     PLIKVSRVRHYGAQSVLHGNDYDTALAEAQQLSLERGLTFVSAFNDPWIVAGQGTIGL
                     ELYEQNPDLDAVVIPVGGGGLIAGIALVLKTLNPKIKIIGVQSDALPAMKAALADGAP
                     VRLPPATTIADGIAVRRVGETPFALVREFVDEIVTVSEGEIANAVLLLLEIEKTVAEG
                     AAAVPLAALMNKKIPLAGKNIGLIVSGGNIDMNLIARIIEKGMIQDGRQSRLNVIVTD
                     RPGNLARLTQCIADQGANILQIGQSRGFGRVAIGETEVELVLETTGANHIQQLRYGLN
                     RDGFRLQPEE"
     gene            3272..4057
                     /locus_tag="VLM90_02085"
     CDS             3272..4057
                     /locus_tag="VLM90_02085"
                     /inference="COORDINATES: protein motif:HMM:NF004281.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HesA/MoeB/ThiF family protein"
                     /protein_id="HSQ11771.1"
                     /translation="MFDRLTTEQIERYSRQIMVPDLGGKTQMRLCRSRVLVIGAGGLG
                     SPAALYLAAAGIGTLGIVDADKVELSNLQRQILHATADIGRPKVESAKATLTKLNPDV
                     EVKTHPVRFDASNAEQIAAGFDFIVDGSDNFDTKFLVNDVAVKLGIPFSHAGIVRLQG
                     QVMTVLPGRSACYRCLFKTPPPPEEILNCQASGILGAVAGTIGTIQATEAVKYLAGFD
                     DGLLTDRLLIYDAKNLRFREVEVRRDPQCAACGAGAPSFIQLG"
BASE COUNT          921 a         1328 c         1146 g          803 t
ORIGIN      
        1 ccatcggtct tcgatctgac gcaggcggcg attcgcctgc tgcacgggcc gcgcggtttt
       61 tttgccttta tcgaatcgga gaatatcgat cgcgcatccc atgccaacga catcgcctcg
      121 gtgattcacg actaccgcga gtttgatcga gcagtgggcg tggcctatga attttatcgc
      181 aaatactcgc gggagacgtt gatcatcgtc gcctccgacc atgaatccgg cgggctcggc
      241 atgactctgg cgctcaaaga cttgtcgagc actaaaggca acaatcaagt cgcaggatgt
      301 ctccacgact tcaataaaat tcgaggaata aaaatctcgt tacaaagcgc cgccaaactt
      361 ctcggcccca accccagcag cgaagccgtc gacaagctca tgaccgagca ctttccggga
      421 ttcgtgctgg cgccggaatt tagagaaaag atcgtcaata atcaatctat gtcacggacg
      481 atttttgccg agccggtcgc caacgcgctg ggcatgatgg tcgcgaacaa cacgcaaatc
      541 tattggcaga acaccgccca ttccaatcat ccggttttag tcgcggcgct gggagtcggc
      601 gccgagcgct tcaagggcta ctacgataac gccgacttcg gtcagaaatt gaaagcgctt
      661 atggaaggca aaaaacagca ataggttcgc gcctggctct ggactaaccg gtcaccgaaa
      721 cgccgaggag ccaacctacg agataggtga tcgccgaggc aaacagaccg atgccgagca
      781 tgcgggcgcc gctaaacagt gcgccgcgcg aggaaaaaat cgacaacagc gcgccgactc
      841 cgaacaatgc cacacagctt aatatagcgc tggccaagaa cgcggtctcg ccgcgagtga
      901 tgatgtaggg aatcaccggc atgatcgcac caacaataaa cgcgccgaaa gaactgccgg
      961 ccgcgaccca aggggaaccc aactgcgaag gatcgaggcc cagctcttca cgcgccaaag
     1021 tatcgatggc agtgcgcgga ttctcgacga tacggcgcgc catcatgcgc gcatccgctt
     1081 ccggaattcc tttggcttga tatatcagcg ccagctcctc ttcctcttcc ttgggcgaca
     1141 tttccagctc ttgtttttcc atcgcgatct gctgctcgaa caactcgcgc tgcgcccgca
     1201 ccgaaacata ttcaccggcg gccatggaga acgatccggc caacaatccg gcgcaaccgg
     1261 cgaggagaat atattccggt ttcgcttcgg cgccggcaaa tcccatcacc aagctgaaat
     1321 tggatacgag cccgtcattg atgccgaaca ccgcggcgcg cagactgccg ccgcgcgacg
     1381 ccatatgcca cgcctcgcgc ccgacgatat cgcccttaga atccgggcct tcgcccatct
     1441 cccggagtac ccggctgtgc gcccgttctt cggctggcaa cccttcggcc tcgctttgat
     1501 tcaagtagcc cggttcatcc cgcgcttcga gggcgctgac gatcggcacc acacggtccg
     1561 tgccaaaacg gcgcgccaac caaccgagca tccgcacacg caggctgcgc cggtaggccg
     1621 gcagcacgcc gccgccggct tgaattaaac ggatccagcg ctgagcgtgg cgttcctcag
     1681 cgcgcactat cttgcgaaaa atctcgtcgc gcttctcatc tttttccgcc gcggcaagcg
     1741 cgcgataaag ctcgatgccg tccatctcga tcaaataatt ttgaccgtaa cgggcgatat
     1801 cggcggcatc gggatttgcg gatgattcag ccatggagca ggttagtttc gcctctatga
     1861 ttttgagttt tgccctttgc ctttctacct tatcgacctt gcatacgcca gtctattcat
     1921 tctaacgtca cgccagcatg attacattcg tcgacgtcga agaagcgcgc gagcgcatca
     1981 aagagcaaat ttatctttcg ccgctgccct attcggaaac catcagccgg atgaccggca
     2041 accgggtttt tttcaagctg gaaaatttgc aaatgaccgg ttccttcaaa gagcgcggcg
     2101 ccctcaaccg cttgctcacg ttgtccgctg aagaaagcaa acgcggcgtg atcgccgcca
     2161 gcgccggcaa ccacggcatg gctctggctt ttcacagcca tcgactcaac atcgccgcga
     2221 ccatcgtcat gccggtgttt gtgccgctga tcaaagtctc ccgcgtgcgc cactatggcg
     2281 cgcagagcgt cctccacggc aacgactacg acaccgcgct ggccgaagcc cagcagctga
     2341 gcctggaacg aggcctcacc ttcgtctcgg cattcaacga cccgtggatc gtcgccggcc
     2401 agggcaccat cggtctcgaa ctatacgaac agaatcccga tctcgatgcg gtggtcattc
     2461 cggtgggcgg cggcggcttg atcgccggca tcgccctggt tttgaagaca ttgaacccca
     2521 aaatcaaaat catcggcgtc cagtccgatg ccttgccggc gatgaaagcc gccttggccg
     2581 atggcgcacc ggttcggctg ccgccggcca cgaccatcgc cgacggcatc gcggtgcgcc
     2641 gcgtcggcga gacaccattt gccctggtca gagagttcgt cgatgagatc gtcaccgtca
     2701 gcgagggcga gatcgccaat gccgtgctgc tactcttgga aatcgaaaag accgttgccg
     2761 aaggcgccgc ggcggtgccc ttggcggcgc tgatgaacaa gaaaatccca ctcgccggca
     2821 aaaacatcgg cctgatcgtc tccggcggca acatcgacat gaatttgatc gcgcgcatca
     2881 ttgaaaaggg catgatccag gacggacgcc agtcgcgctt gaacgtgatc gtcacggacc
     2941 gccctggaaa tctcgcccgg ctcacccaat gcatagccga ccagggcgcg aatatcttac
     3001 agatcggcca gagcagagga ttcggccgcg tcgccatcgg cgagaccgaa gtggaacttg
     3061 tgctcgaaac caccggcgcc aatcatatcc agcaactgcg ctacggcttg aaccgtgatg
     3121 gttttcgctt gcagccggaa gagtgaccgg ctccagccgt cgcgcgcggc gatccctggt
     3181 tgacttcgcc gccgcgggta agttagcttg ccaagcaact tcgcaatccg agtgcaccaa
     3241 aagaaatctc tgaccgagta cgcggagagc tatgttcgac cgactgacta ccgagcaaat
     3301 cgaacgctac agccgccaga tcatggtccc ggaccttggc ggcaagacgc aaatgcgcct
     3361 gtgccgatca cgcgtgctgg tcatcggcgc cggcggcttg ggctcgccgg cggcgcttta
     3421 tttagccgcc gccggcatcg gcacgctggg catcgtcgac gcggacaaag tggagctgtc
     3481 gaatctccag cgccagatcc tccacgccac cgcggatatc ggccggccga aagtcgagtc
     3541 ggccaaagcg acgctgacga aacttaatcc cgatgtcgaa gtcaaaaccc atccggtgcg
     3601 cttcgatgcc agcaatgcgg aacagatcgc cgcgggcttc gacttcatcg tcgacggcag
     3661 cgacaacttc gacacgaaat ttctcgtcaa cgacgtcgcg gtaaagctcg gtatcccatt
     3721 ctcccacgct ggcatcgtgc gtttgcaagg ccaagtaatg accgtgctgc cgggcagaag
     3781 cgcttgttac cgctgcctgt ttaaaactcc gccgccgcct gaggaaattt taaactgcca
     3841 agcctccggc atcctcggcg ccgtggccgg caccatcggc acgattcagg ccaccgaagc
     3901 ggtgaaatat ttggcaggat ttgacgacgg cttgctcacc gatcgcttgt tgatctatga
     3961 cgccaagaac ctgcgtttcc gcgaggtcga agtcagacgc gatccgcagt gcgccgcctg
     4021 cggcgccggc gcgccatcct tcatccagct cggctgactc aatcgcgaga gccattcaca
     4081 tgagttacgt gcaaggcctt gagtgccgcg agtgcaaaca acagtacgcc aaccaaccga
     4141 cgcatgtatg cgacgactgt ttcggcccgc tcgatattcg ttacgactac gatgctat
//
LOCUS       DATIRS010000168         2448 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_503849, whole genome shotgun sequence.
ACCESSION   DATIRS010000168 DATIRS010000000
VERSION     DATIRS010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2448)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2448)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2448
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_503849"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..481
                     /locus_tag="VLM90_02090"
     CDS             <1..481
                     /locus_tag="VLM90_02090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11772.1"
                     /translation="QGISTCCLWVEANRVDVIGLCTSSSGVVEAGFWQRLKSRNVAAG
                     YTTIKLGYSIAGLMRLDELNRAKRTLATLRADFLKLSEQLRTVGAIVDRRGGQLIRLD
                     RTAYEGMISSFTVQYKMATGELVTEEFSAPSLYDFSVQIFMMEKRRSGNSPSVSQAA"
     gene            734..1972
                     /locus_tag="VLM90_02095"
     CDS             734..1972
                     /locus_tag="VLM90_02095"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ11773.1"
                     /translation="MAWLYRHRAAEVLRYRDFRLLWFGHVFGSMSFWMDQVTRGWLIY
                     ELTDSTVQLGMIRGVQAIPILFLSPIAGSVADRYSRKKQILITQIADGVMLAALALLI
                     LYGAVEPWHVYVSAFGMAVVQTFHQPARAAIMTDTVPASHLTNAIGLNSMIFNVARSL
                     GPALAGVLISWSGTGGAYSVQAIFYLLATFWTLRLSDIEAGAARAGGHGAERFSLRGS
                     IVEGWKFSWQNENVRTALLIAMLAALFIVPFTTLLPVFARDILQVGASGQGLLLTAMG
                     VGALGSAVMIAGFGDRMPRGKIMLGGAAVYGLGAAAFAFSPWFQLSMFLMIIIGLANV
                     CTHALVQTVIQTYSPPQFRGRTIALFHMSQVVMTVGSMFIGSLAALSGAQWAVVLMGS
                     AGALAMLGIQILLPRAWHIR"
     gene            1994..>2448
                     /locus_tag="VLM90_02100"
     CDS             1994..>2448
                     /locus_tag="VLM90_02100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11774.1"
                     /translation="MEDRRLNDSDSLQVEAPLEPELPICDAHHHLWKRPPHDYLLDDL
                     LIDLRSGHNLVSTVAIECRYGYREDGAEELKPVGEVEFLEGVSSLVAANPAITTRIAA
                     AIVGHANLTLGDAVAPVLEAHLKASPKRFRGIRHSTTWDGSAALRSEAAR"
BASE COUNT          414 a          736 c          759 g          539 t
ORIGIN      
        1 ccaggggata tccacttgct gtctatgggt ggaagcgaac cgtgtcgacg tcatcggcct
       61 gtgcactagc agcagcggtg ttgtagaggc ggggttctgg cagcgtctca aatcgaggaa
      121 cgtagccgcg ggctatacaa ccattaagtt gggctattcc atcgcggggt tgatgcggct
      181 tgacgagctc aaccgagcga agcgtaccct cgccacgctg cgagccgatt tcctcaagct
      241 ctccgagcaa ctgcgcaccg tcggcgccat cgtcgaccgg cgcggtggcc aattgatccg
      301 gctcgaccgg acggcttacg agggcatgat ttcgtcattc accgtgcagt acaaaatggc
      361 caccggcgag ttggtaacgg aagaatttag cgccccgagt ctttacgatt tttcagtgca
      421 gatcttcatg atggaaaagc gccggtcggg caacagtcca tcggtgtcgc aggccgctta
      481 gagcgttagc ttgcgcgttc gttggttttc gcgttatcca aagtctctcg gccgtgccga
      541 gattctcact cctgtcaatc cttactcgcc gctggacgcg ctcatttcgc tcgtgctata
      601 ggcaaaagat catgtgtttc cttcagtcat tcgggagtcg gtcctgagct ccgttccggg
      661 cgataaggaa agccttcgcg attcactcga tgccgaggcc gcgggttccg cggcgcaacc
      721 caaacgggac ccgttggctt ggttataccg acatcgcgcc gccgaagtcc tgcgctaccg
      781 cgatttccgc ttgctctggt tcggccatgt gttcggttcc atgtcgtttt ggatggacca
      841 ggtgacgcgc ggctggctga tctatgaact gaccgattcc accgtgcagt tgggcatgat
      901 ccgcggcgtg caggcgatcc cgatcctgtt tctctcgccc atcgccggca gcgtcgccga
      961 ccgttactcg cgcaagaagc aaatcctcat cacccagatc gccgacggag tcatgttggc
     1021 ggcgctggcg ctgttgatat tatacggtgc ggtggagcct tggcatgtct acgtctccgc
     1081 gttcggcatg gcggtggtgc aaacctttca tcagccggcg cgggcggcga tcatgaccga
     1141 taccgtgccg gcgagccatc tgaccaacgc catcggcctc aactcgatga tcttcaatgt
     1201 cgcgcgcagc ctgggcccgg ccttggccgg cgtgttgatc tcgtggagcg gcacgggcgg
     1261 ggcctactcc gtgcaggcga ttttttattt actcgcaacc ttttggactc tgcgcttgag
     1321 cgacatcgag gccggcgccg cccgcgccgg cggccatggc gccgagcggt tttccttacg
     1381 cggcagcatc gtcgaaggat ggaaattcag ctggcagaac gaaaacgtcc gcacggcgct
     1441 gttgattgcc atgctggcgg cgctgttcat cgtgccgttc acgacgctct tgccggtgtt
     1501 tgcccgcgat attcttcaag tcggcgcctc cggccaaggc ttgttgctga cggccatggg
     1561 cgtcggcgcg ctcggcagcg cggtgatgat cgccggcttc ggcgatcgca tgccgcgcgg
     1621 caagatcatg ttaggcggcg cggcggttta tggcctcggc gccgccgcct tcgcgttttc
     1681 gccgtggttt cagctgtcga tgttcttgat gattattatc ggtttagcca acgtctgtac
     1741 ccacgcgctg gtgcagaccg tgatccaaac ctattcgccg ccgcaattcc gcggccgcac
     1801 catcgcgctg tttcacatga gccaggtggt gatgaccgtc ggcagcatgt tcatcggatc
     1861 cctcgccgcg ctttccggcg cgcagtgggc ggtggtgctg atgggcagcg cgggcgcgtt
     1921 ggcgatgctg ggtattcaaa tcctgttgcc gcgcgcctgg catattcgct aatagcaaat
     1981 cgaggatgga gatatggaag atcgacgatt gaacgactcc gattcgcttc aggtcgaagc
     2041 gccattggag cccgagctgc cgatctgtga tgcgcaccac catctctgga agcggccgcc
     2101 gcatgattat ttgcttgacg atttgctcat tgatctgcgc agcggccaca acctggtttc
     2161 gaccgtcgcc atcgagtgcc gctacggata tcgagaagat ggcgccgagg aattgaagcc
     2221 cgtcggtgaa gtcgaatttc ttgaaggcgt ctccagcctg gtcgccgcga acccggcaat
     2281 cactacgcgc atcgcggcag cgattgtcgg tcacgcaaac ctcacgcttg gcgacgcggt
     2341 ggcgccggtg ctcgaagccc atttgaaggc gagcccgaag cgcttccgcg gcattcgcca
     2401 ctcgacgact tgggacggca gcgccgcgct gcgcagcgag gcggcgcg
//
LOCUS       DATIRS010000169         3949 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_307514, whole genome shotgun sequence.
ACCESSION   DATIRS010000169 DATIRS010000000
VERSION     DATIRS010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3949)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3949)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3949
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_307514"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..668)
                     /locus_tag="VLM90_02105"
     CDS             complement(<1..668)
                     /locus_tag="VLM90_02105"
                     /inference="COORDINATES: protein motif:HMM:NF016658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF547 domain-containing protein"
                     /protein_id="HSQ11775.1"
                     /translation="MAVGVLGYSSAQAAPKAELWARWQKHDPASEQKIDHRVWDRLLK
                     QYVVSHPSAINRVRYQDFRAEEQKLLKNYLQSLQAISISSYNRKEQQAYWINLYNALT
                     VELIVSRLPVASIRDINISPGLLARGPWGAKLLTVEGEKLSLDDIEHRILRPIWRDER
                     IHYAVNCASLGCPNLQPAAYTGENTEALLDKGAKEFINHSRGVLLAGGKLKVSSIYVW
                     FQED"
     gene            complement(732..2984)
                     /locus_tag="VLM90_02110"
     CDS             complement(732..2984)
                     /locus_tag="VLM90_02110"
                     /inference="COORDINATES: protein motif:HMM:NF004991.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-containing oxidoreductase"
                     /protein_id="HSQ11776.1"
                     /translation="MKSGKIALLVFLAVALFIGFLFLPIRAWFTQIEGYVQSLGAIGP
                     VVVVLAYVLCTVLFVPGSAITIGSGTLFGLSTGFIVVVLGANLGALCSFLLARSFLRE
                     KVTSWASANPKFRSLDQAIGKQGFKMVLLTRLSPVFPFVLLNYLLGLTAVRTPSYVLA
                     NLIGMLPATFLFVYIGAAARDALAGQVDASADFYQTLLKYVGLAATVAVVVFVTRIAR
                     KALREAEQQQEGNITTGQPLLDPHHKPAAYDEMLLADDVHDRQLIDNCHPPRWSNPTP
                     AGKYNMVVIGGGTAGLVSAAGAAGLGAKVALIERNLLGGDCLNVGCVPSKGVIRAARA
                     AHDARNGGEFGVHHAGAPQIGFAAVMERMRRLRAGISEHDSAERFRKLGVDVFIGDGR
                     FVDSNTIEIDGKRLQFNRAVIATGARAAEPAVAGLRDTGYYTNETIFTLTELPRRLAV
                     IGAGPIGCELAQSFQRFGSQVTLLTDGAEIMPREDRDAAAVVRQQIEKDGVTIITGAK
                     IHSAARVDGAKSLTLHIGDQPMDLAYDAILVAVGRTPNLEGLGLESANVRYGRRGVEV
                     DARMRTSNPRVYAAGDVCSRFHFTHAADAMARIVIANALFMSRRKATDLIMPWCTYTD
                     PEIAHVGYYEKDAQAAGYDVATITQPLADVDRAILDGEAEGFARVHYDKKTARILGGT
                     IVARHAGEMLGELTLAITAKQTVGVLSSTIHSYPTQAEALRKIGDAYMRTKLTPTVKK
                     IFAKWLEWRR"
     gene            complement(3082..>3949)
                     /locus_tag="VLM90_02115"
     CDS             complement(3082..>3949)
                     /locus_tag="VLM90_02115"
                     /inference="COORDINATES: protein motif:HMM:NF013543.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HSQ11777.1"
                     /translation="AVIFGAALTVILATRIAIPISTTHSLTGALLGSGLVAAGGQLGL
                     HTLFAGFFLPLLVSPVIAMALAALCYPLFSRAIAHLGLTHENCVCVGSELVPTFVTAD
                     GMVFTETTPGLRVIVDNSAVCARRLSGVVYGINGQRLLDIGHFISAGAVSFARGLNDT
                     PKLVALSLAVSVLDLAWSVVLVALFMALGGLMHSRKIAETVGKRITSLDADQGFVANL
                     ATSFLVIVASNWGLPVSTTHVSCGALFGIGIANGQARWPMIRTILLAWVLTLPTAAFL
                     SGTSYIVLKSFI"
BASE COUNT          861 a         1236 c         1132 g          720 t
ORIGIN      
        1 aaatcttctt ggaaccagac atagatgctc gacactttga gcttgcctcc ggcgagcagc
       61 acgccccggg aatggttaat gaactccttt gcgcccttgt cgagcagcgc ttcggtattt
      121 tcaccggtgt aagccgccgg ctgtaaattc gggcagccta aactggcgca gttgaccgca
      181 taatgaatcc gctcgtcacg ccagatcggc cgcaaaatcc gatgctcgat gtcgtccagc
      241 gacagcttct cgccttccac ggtcaacaac ttggcgcccc aaggaccgcg cgccagcaag
      301 ccgggagaga tattgatgtc acgaatcgac gccaccggga gacgagaaac aatcaactcg
      361 acggtgagtg cgttgtagag attgatccag tacgcctgct gctctttgcg gttatagctg
      421 gagatcgaaa ttgcttgcag gctctggaga taattcttca agagcttttg ctcctcggca
      481 cgaaaatcct gatagcgcac gcggttgatg gccgatggat ggctgacgac gtactgcttg
      541 agcaatcgat cccatactcg atgatcgatc ttctgctcac tcgctggatc atgcttctgc
      601 cagcgcgccc acaactccgc cttgggcgcg gcctgcgcgg acgaatatcc aagaacgccg
      661 actgccattg caagtgcgct cagtccgatc cggaacccct tactcctcac tcttgactcc
      721 ttaccctctt ctcaccgtcg ccactccagc catttggcaa atatcttttt caccgtcggc
      781 gtcagcttgg tacgcatata ggcgtcgccg atcttgcgca gcgcctcggc ctgggtcggg
      841 tatgaatgaa tcgtcgacga cagcacgccg accgtctgct tcgccgtgat tgccagcgtc
      901 agctcgccca acatttcgcc ggcatgacgc gcgacgatgg tgccgccaag aatcctagca
      961 gttttcttgt cgtagtgaac ccgggcaaac ccttccgcct cgccgtcgag gatcgcccgg
     1021 tcgacatcgg cgagcggctg cgtgatcgtc gccacatcgt agcccgcggc ctgggcgtcc
     1081 ttctcgtagt agccgacgtg agcgatctcc gggtcggtat aggtgcacca gggcatgatc
     1141 aaatcggtcg ccttgcgccg cgacatgaac agcgcgttgg caatgacgat gcgcgccatc
     1201 gcatcggcgg cgtgggtgaa gtgaaaacgc gaacagacat cgccggcggc gtacacccgc
     1261 ggattagacg tgcgcatgcg cgcatcgact tctacgccgc gcctgccata acgaacattc
     1321 gcggactcca aacccaaccc ctcgaggttt ggcgtgcgcc ccaccgctac gaggatcgcg
     1381 tcgtaagcta aatccatcgg ctggtcgccg atatgtagcg ttaaactctt cgcgccgtcg
     1441 acccgcgcgg cgctgtgaat cttcgcgccg gtgataatcg tcacaccgtc tttttcgatc
     1501 tgctgacgaa ccaccgccgc ggcgtcgcga tcctcgcgcg gcatgatctc cgcgccatca
     1561 gtgagcaagg tcacttggct gccgaagcgt tgaaaacttt gcgccagctc gcaaccgatg
     1621 ggaccggcgc cgatgacggc gagacgacgc ggcaactccg tgagcgtaaa aatcgtctcg
     1681 ttagtgtagt agccggtgtc gcgcaagccg gcgaccgccg gctccgcggc gcgcgcgccg
     1741 gtagcgatca ccgcgcggtt gaactgtagg cgtttgccgt cgatttcgat ggtgttggaa
     1801 tcgacgaagc ggccatcgcc gatgaagaca tcgacgccca acttacggaa tcgctccgcc
     1861 gaatcatgtt cgctgatgcc ggcgcgcagc cggcgcatgc gctccatcac cgcggcaaat
     1921 ccgatctgcg gcgcgccggc atggtgaacg ccgaattcac cgccgttgcg cgcgtcgtgg
     1981 gcagcccgcg cggcgcgaat cacgccttta gacggcacgc agccgacgtt gaggcaatcg
     2041 ccgcccaaga gattgcgctc gatcagcgcg actttcgcgc ccagcccagc tgcgcctgcg
     2101 gcgctgacca atcccgccgt accgccgccg atgacaacca tattgtattt ccccgccggc
     2161 gtcgggttgc tccagcgcgg cggatggcag ttgtcgatca actgccggtc atggacatcg
     2221 tcggccagca gcatttcatc gtaggccgcc ggtttgtggt gcggatcgag cagcggctga
     2281 ccggtcgtga tgtttccttc ctgctgctgc tctgcctcgc gtagcgcttt gcgcgcgatg
     2341 cgggtgacga agacaaccac cgccaccgtg gccgccaagc cgacatactt aagaagcgtc
     2401 tgatagaaat ccgccgacgc atccacctgc cccgccagcg catcgcgggc cgccgcgccg
     2461 atatagacaa acaagaaagt cgccggcagc atgccgatca agttcgccag cacataagac
     2521 ggcgtgcgca ccgccgtgag gccgagcaaa tagttcagca ggacgaaggg aaacaccggg
     2581 ctcaatcggg tcagcaaaac catcttgaac ccctgcttgc cgatggcctg gtcgagggag
     2641 cgaaatttcg gattggccga cgcccagctg gtgacttttt cgcgcagaaa gctgcgcgcc
     2701 aggagaaacg aacatagagc gccgagattg gcgccgagca cgacgacgat aaaacctgtc
     2761 gacagaccaa acaaagtgcc ggaaccgatg gtgatggcac tgccgggaac aaacagcacg
     2821 gtgcagagca cataagccag caccaccacg accggtccaa tggcgcccag cgattgcacg
     2881 tagccttcaa tctgcgtgaa ccaagcgcgg ataggcagaa acaaaaaacc aatgaacaaa
     2941 gccacggcta aaaacaccaa gagagcgatc ttaccggatt tcatagcagt ccttgaggga
     3001 gacaaaatct agtgctgctt agacgttccg acgcggcgca agggtgcgac ctcatttgta
     3061 gttgtggcgg aagctaaccg tctagataaa gcttttcaat actatgtaac tcgtgccgga
     3121 caagaacgcc gctgtcggta aggtgagcac ccaggccaaa aggatcgtgc gaatcatcgg
     3181 ccagcgcgct tggccattgg cgatgccgat accgaacaac gcgccgcaag atacatgggt
     3241 ggtcgacacc ggcagccccc aattggaggc gacgatgacc agaaagctgg tcgccagatt
     3301 ggcgacaaat ccttggtcgg cgtccagcga ggtaattcgt ttgccgacgg tctcggcaat
     3361 tttccgtgaa tgcattagcc cacccagggc cataaacagg gcgacgagaa ccaccgacca
     3421 agccaagtcg agtacgctca ccgccaggct gagagcgacc agcttaggcg tgtcattcaa
     3481 accgcgcgcg aaactgaccg cgcccgcgct aataaaatga ccgatgtcga ggagcctctg
     3541 gccgttgatg ccgtatacaa ctccggaaag cctgcgcgcg cataccgctg agttatcgac
     3601 gatgacccgc aggcccggcg tagtctcggt gaagaccatg ccatcggccg taacaaatgt
     3661 cggaaccaat tcactgccga cacagacgca gttttcatgg gtcagtccta aatgcgcgat
     3721 cgcccggctg aaaagcgggt agcacagcgc tgccagcgcc atcgcgatca ccgggctgac
     3781 cagcagcggc aagaaaaacc cagcgaacaa cgtgtgcaaa cccagctgtc caccggccgc
     3841 caccagtccg ctgcccaata gcgctccggt caagctgtga gtggttgaga tcggaatggc
     3901 gatcctggtc gccagtatga cggtgagcgc cgctccgaaa attaccgcg
//
LOCUS       DATIRS010000170         2173 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_209292, whole genome shotgun sequence.
ACCESSION   DATIRS010000170 DATIRS010000000
VERSION     DATIRS010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2173)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2173)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2173
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_209292"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(76..519)
                     /locus_tag="VLM90_02120"
     CDS             complement(76..519)
                     /locus_tag="VLM90_02120"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSQ11778.1"
                     /translation="MKSPKKMPIVGAVMTSFPYFVNSGDPLGRLEKMMDERGIRHLPV
                     QEKDKLVGIVSERDLHHRLPRSVPPEEKSRLRARDVMVIDPYVVAFNTPLSEVVAQMA
                     LRHIGSAIVTRRGKLAGILSAMDVCRIFAEYLDHQFGVVGGSDAA"
     gene            complement(568..1008)
                     /locus_tag="VLM90_02125"
     CDS             complement(568..1008)
                     /locus_tag="VLM90_02125"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSQ11779.1"
                     /translation="MIKTSKILAPTDLSDLSRPALRYALEFAMERRAAVIVYHVISED
                     SDWLGSDDKLNPANALLPQQRERLHAFMTEHFADLMEQVEVTEIVEAGVPYNKIVEKA
                     RSENADLIVMSTHGRTGFQQVLLGSVTAKVVARAGCPVLSMRPA"
     gene            1285..1701
                     /locus_tag="VLM90_02130"
     CDS             1285..1701
                     /locus_tag="VLM90_02130"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSQ11780.1"
                     /translation="MKVVDLMTNDPLTVTTAETVGKADELMAENNIRQIPVVNGRELV
                     GIVTDRDVRAFLSDALLAQPEARDRALKTSVGDIMTTEPLFITPDDDLKDAVEMLIEQ
                     KFGAIPVVDEAEGLVGIVSYVDVLRSYLERLQEEGT"
     gene            1698..2120
                     /locus_tag="VLM90_02135"
     CDS             1698..2120
                     /locus_tag="VLM90_02135"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSQ11781.1"
                     /translation="MKNGKEGVAREIMMGSPVTLKPEDTLDLANDVISLGRIRHIPIV
                     DGSRLVGIVTERDLIGAAAAQIFGLKRKSKSALLKSVLIKEVMKKRVITAAPDTPIKE
                     IAHLMANKKIGCVPVVSDGMVVGLVTTTDILRYVESLA"
BASE COUNT          503 a          646 c          595 g          429 t
ORIGIN      
        1 caaacaggtc gccgagccat caaaggctcg gtagcgaaag cagccaaaat ctgctcgaac
       61 tcgaggctcg gatcgttagg ccgcatcgct gccgccaaca acgccaaact gatgatctaa
      121 gtattcggcg aagatgcggc agacgtccat ggctgataaa atacccgcca gtttgcccct
      181 tcgggtgacg atcgccgaac cgatatgccg cagcgccatc tgcgcgacca cttcgctcaa
      241 tggcgtattg aaagcgacga cataaggatc aatgaccatg acatcgcggg cacgcaaccg
      301 tgatttctct tccggcggga cacttcgcgg cagacgatga tgcagatcgc gctccgacac
      361 gatgccaacg agtttgtcct tctcctggac cggcaagtgg cgaatgccac gttcgtccat
      421 catcttctcc aacctgccga gcggatcgcc gctgttgacg aagtagggaa acgatgtcat
      481 taccgccccg acaatgggca ttttcttggg tgatttcacg acctctcctt cctggttatc
      541 gaccgccgcg ggcctgcgct accgacatca tgctggccgc atcgacagca ccgggcagcc
      601 cgcccgcgcc actaccttgg cggtgacgct gccgagcagg acctgctgaa agccggtgcg
      661 tccatgggtc gacatgacga tcaagtcggc gttttcgctc cgcgcctttt cgacgatctt
      721 attgtagggc acgccggcct cgacgatctc ggtcacctcg acttgctcca tcaggtcggc
      781 aaagtgctct gtcatgaatg catgcaagcg ttctctctgt tgcggcaaca aggcgtttgc
      841 gggattgagc ttgtcgtcgc tgccgagcca atcgctgtct tcgctaatca catgatagac
      901 gatcaccgcg gcgcgccgct ccatggcgaa ttctagagca tagcgcagcg ccggtcgcga
      961 tagatctgac agatccgtcg gcgcgaggat tttgctggtt ttgatcacat caccctccta
     1021 tgcggcaaat tccaatgaaa ttccataatg aacaagagca agaactacgc cttcgcggcc
     1081 gcgctgttag gtaaaccaaa tccgcggtct ctacctgaat tttttcgcag cattgcgcaa
     1141 atccaccgcg atattctcat ttgtgaaaac cagccgccga gtcagcgccg caatcgcgcc
     1201 aactcccgcg ataatttttt tcgtgagctt ggcacggaca ctgcaccgat aacgggtgca
     1261 gcaactattg aggaggaacc gaggatgaaa gttgtagacc tgatgaccaa cgacccattg
     1321 accgtgacga ccgcggaaac cgtcggtaaa gccgacgaac tcatggcgga aaacaatata
     1381 cggcaaatcc cggtggtcaa cggccgcgaa ctcgtcggca tcgtcaccga ccgcgatgtc
     1441 cgggcgtttc tcagcgacgc cctattggcc caacccgaag ccagagaccg cgccttgaag
     1501 acttcggtgg gcgatatcat gaccacggag ccgctgttca tcacccccga tgacgatctc
     1561 aaggacgccg tcgaaatgct catcgaacaa aagttcggcg ccatcccggt ggtcgacgaa
     1621 gccgaaggac tggttggtat cgtctcctat gtcgatgtgc tgcgcagtta tctcgaacgg
     1681 ctacaggagg aagggacatg aaaaacggca aagaaggagt cgcccgcgaa atcatgatgg
     1741 gcagcccggt aacgctcaag ccagaagaca ccttggactt ggccaacgat gtcatatccc
     1801 tcggccgcat tcgccatatc ccgattgtcg atggcagccg gctggtcggc atcgtcaccg
     1861 aacgggatct gatcggcgcc gccgccgcgc aaatcttcgg cctcaaacgg aagagcaaat
     1921 cggcgctact gaaaagcgtg ctgatcaagg aagtgatgaa gaagcgcgtc atcaccgcgg
     1981 cgcccgacac gccgatcaaa gaaatcgcgc atttgatggc caataaaaag atcggctgcg
     2041 tgccggtggt cagcgacggc atggtcgtgg gcctggtgac gacaaccgac attttacgct
     2101 acgtcgagag cctggcatga ccggcgaaat cggcaatctg gaatctgaaa tcttgcattt
     2161 gtcatagcgg cct
//
LOCUS       DATIRS010000171         1692 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_307845, whole genome shotgun sequence.
ACCESSION   DATIRS010000171 DATIRS010000000
VERSION     DATIRS010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1692
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_307845"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            153..1418
                     /locus_tag="VLM90_02140"
     CDS             153..1418
                     /locus_tag="VLM90_02140"
                     /inference="COORDINATES: protein motif:HMM:NF039910.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSQ11782.1"
                     /translation="MITEDENNLLTQTGKGTPCGELMRRYWQPAALSEELAADKPFPV
                     QLFGEELILFRDGTGQPALIGRYCAHQGVDMIYGRVEPDGLRCLYHGWLFDTCGKVLL
                     RGDWLPEKERRWDVGQPSYPCVEAGGIIFVYMGPGDPPVLPPYEFLTVAPENRAVTKI
                     EVSCNYLQANEGNIDPLHLSFLHRNLQDSERDKQRVVPGSSATPNSLVSKDQTPVIEV
                     DVADFGLRIYTIRKPGDGRQYLRVTNYIYPNLAAFNGSTTGEGYSAHWHVPIDDHSHW
                     KYAFLFSRERALTQELRDRIRVETTDGNHLKRKSDNRYLQDRESMRAETFSGMGFHFH
                     AQDAFATESQGPVQNRTEENLVSSDKPIVAARKLLLKAIRDVAGGREPPHIQREPSAA
                     HVPKILVLSEVIPAEANPREYVKSLEARR"
BASE COUNT          399 a          439 c          523 g          331 t
ORIGIN      
        1 aattggccgc aaataacgca atggtcgtaa agttcggaac gggatgttca ccacgaaggc
       61 acgaagagca cgaagttcgg aatagtaatt atccgaaacc ttcgtgatct tcgtggtgag
      121 taacagtctt tacataattt gagatcttca cgatgatcac tgaagacgaa aataatttac
      181 tgacgcagac tggcaagggc acgccctgcg gtgagttgat gcggcgctat tggcagccgg
      241 cggctttgtc ggaggagttg gcggcggaca aaccgttccc ggtgcaactt ttcggcgaag
      301 agttgattct ctttcgcgac ggcacgggcc agccggcgtt gatcggccgc tactgcgcgc
      361 atcagggcgt cgatatgatt tatggccggg tcgagccgga tggactgcgc tgtttgtatc
      421 atggctggct gttcgacacc tgtggcaagg tgttgttgcg cggcgactgg ttgccggaga
      481 aggagcggcg ctgggatgtc ggccagccgt cttatccctg cgtcgaagcg ggcggaatta
      541 tttttgttta tatggggccc ggcgatccgc cggtgctgcc gccctatgaa tttctcacgg
      601 tggcgccgga gaatcgcgcg gtgacgaaga tcgaagtcag ctgcaattat ttgcaagcca
      661 acgagggcaa tatcgatccg ctgcacttgt cgttcttgca ccgcaatctg caagacagcg
      721 aacgcgacaa acagcgggtg gtgccgggca gcagcgccac gcccaactcg ctggtgagca
      781 aggatcagac gccggtcatc gaagtcgacg tcgccgactt tggcttgcgc atctacacga
      841 tccgaaagcc gggggatggc cggcaatatc tgcgcgtgac caactatatc tatccaaacc
      901 tggcggcgtt caacggctcg accaccggcg aaggttattc ggcgcattgg catgtgccga
      961 tcgacgatca ctcgcattgg aaatacgcat ttctcttcag ccgcgagcgg gcgctgactc
     1021 aggagctgcg cgacagaatt cgcgtggaaa ccaccgatgg caatcacttg aagcggaaga
     1081 gtgacaatcg ctatttgcaa gaccgcgagt cgatgcgggc agagacgttc agcggcatgg
     1141 ggtttcattt ccatgctcag gatgcctttg ccaccgagtc ccaagggccg gtgcaaaatc
     1201 gcactgagga aaacctggta agctcggaca agccgattgt cgcggcgcgc aaactattgc
     1261 tgaaagcgat ccgcgacgtt gccggcggac gcgagccgcc gcatatccag cgcgaaccga
     1321 gcgccgccca tgtgccgaag attctagtat tatccgaagt cattcccgcc gaggcgaatc
     1381 cgcgcgagta tgtgaaaagc ctggaagcgc ggcgctaata tcgcgcgctg gcggtttgat
     1441 tgggaaatgc ctttcaccac gaagagcaca gctcggctgc gccgcagcca aagaaaagag
     1501 taggattcgg aaatttaacc acaaagagcc tagcgcggca tagccgcaac caaaggggag
     1561 aagatattta accacaaagg gcacataggt cacaaagtag gggcaggtcg ggaccggccc
     1621 atttcggaat cggggaattg gccgcaaaga acgcaaaggg cgcaaagaaa tgggatttgt
     1681 ccaaggggtg ga
//
LOCUS       DATIRS010000172         1518 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_406430, whole genome shotgun sequence.
ACCESSION   DATIRS010000172 DATIRS010000000
VERSION     DATIRS010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1518
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_406430"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1006)
                     /locus_tag="VLM90_02145"
     CDS             complement(<1..1006)
                     /locus_tag="VLM90_02145"
                     /inference="COORDINATES: protein motif:HMM:NF021645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoPQ-activated protein PqaA family protein"
                     /protein_id="HSQ11783.1"
                     /translation="MILRDRVRIVLALCALATVGLLAAPSSADLQKYVDKREPSFEWQ
                     LKNKIDREQSGERIYDLHFVSQVWQGKTWQHQLQIYRPADAAPSATMFLWVTGGAASP
                     EAISLGLELARKMQAPVAFVYHIPNQPLLEGNLREDDRIAETFVRYLKSKDESWPLLL
                     PMVKSVVKAMNVLQAFGKKEWSAPIDKFIVAGASKRGWTTWLTAAVDKRIGAIAPVVI
                     DVLNMRAQMSHQVQTLGAYSSRLTPYSSRGLLPIPETPAGQRLLNMVDPWAYRERLTM
                     PKLIVNGTNDAYWATDALNLYWDGIPSDKSVLYIPNAGHNLRRQDRPQREQLNDLITG
                     L"
     gene            complement(1245..>1518)
                     /locus_tag="VLM90_02150"
     CDS             complement(1245..>1518)
                     /locus_tag="VLM90_02150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11784.1"
                     /translation="VLFQPLREGQLKIDHLRQIQKRRELPTRVTQGLQVAVQRRIIAR
                     VLGQTVPLKPPLALRLLAKIPFLRRIPARLVGLGIRPEHVSPELLR"
BASE COUNT          301 a          446 c          439 g          332 t
ORIGIN      
        1 cgaggccggt gatgagatcg ttcaattgct ctcgctgcgg ccggtcttgc cgtcttaagt
       61 tatgcccggc gttgggaata tagagcaccg atttgtcgct tggaatgccg tcccaataaa
      121 gattgagcgc gtccgtcgcc cagtaagcat cattagtgcc gttgacgatc agcttgggca
      181 tggtcaagcg ctcgcggtag gcccacggat cgaccatgtt caagaggcgc tggccggccg
      241 gtgtttcggg gatcggcagc aatccgcggc tactgtaagg cgtgagtcga gaactgtaag
      301 cgccaagggt ctgaacctgg tgtgacatct gcgcgcgcat gttgagcacg tcgatgacca
      361 ccggcgcaat cgcgccgatc cgcttgtcga ccgcggccgt aagccaggtc gtccagccgc
      421 gcttcgacgc gccggcgacg atgaacttat cgatcggcgc gctccattct tttttgccga
      481 acgcctgcaa gacgttcatc gctttgacga cgctcttcac catcggcaag agcagcggcc
      541 aactttcatc tttggacttg agataacgga caaaggtttc ggcgatccga tcgtcttcac
      601 gcaaattccc ctcaagtaac ggctgattgg ggatatgata gacaaaggcg accggcgcct
      661 gcatcttgcg cgccagttcc aggcccaacg aaatggcctc gggtgacgcg gcgccgccgg
      721 tcacccacaa gaacattgtc gcgctcggcg cggcgtccgc cggccggtaa atttgcagct
      781 ggtgctgcca agtttttccc tgccaaacct gcgacacaaa gtgcagatcg taaatccgct
      841 cgccggactg ctcccggtcg attttgtttt ttagttgcca ctcgaagctg ggctcccgct
      901 tgtcgacgta cttttgcagg tccgctgagc tcggcgccgc gagcaaaccc actgtggcca
      961 atgcacacaa cgcgagaaca atcctgactc ggtctcgcaa gatcatggac attttccttg
     1021 tgacgcgcct ctgcggtgcg atttaatctc tgcgggacaa attccccgca gcttgctgcg
     1081 ttaaactaaa tgcctttccg aattccgtca ttcccgcatg ccttaagcgg gaatccaggc
     1141 gaatctggaa ctggaccgcc gattaataca ttcgggggtg acatccatgg aattattctc
     1201 atcgcgttct tctgatgccc agcagctttc tgcggggtag ttcatcaacg taagagctcc
     1261 ggactcacat gttccgggcg gatgccgaga ccgaccagac gggcggggat tcgccggaga
     1321 aatggaatct tggcaagtaa gcgcagcgca agcggcggct tgagcggtac cgtctgtccc
     1381 aacacccgcg caatgatccg gcgctgcacg gcgacttgca acccttgcgt cacgcgcgtg
     1441 ggcaactcgc ggcgcttttg gatttggcgc aggtgatcga tcttgagctg tccttcgcgc
     1501 agcggttgga aaagaacg
//
LOCUS       DATIRS010000173         1637 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_603324, whole genome shotgun sequence.
ACCESSION   DATIRS010000173 DATIRS010000000
VERSION     DATIRS010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1637
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_603324"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..957
                     /locus_tag="VLM90_02155"
     CDS             <1..957
                     /locus_tag="VLM90_02155"
                     /EC_number="1.2.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF006667.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HSQ11785.1"
                     /translation="DAIRFGLAEEMRRDATMYVFGEDVALGGPFGVTKGLAEEFGANR
                     MVNTPISEGTVMGLAVGAATAGLRPLVEIMFIDFITLAMDQLVNHAAKLHYMSGGQLK
                     IPLTVRVQCGISGAMGAHHSQSLEAWLAHVPGLKIVMPSNPADAKGLLKAAIRDDNPV
                     VFIEHRGLYWSKGEVSEADVTVPVGVAKVLRPGDQVTIVALANMVGPALAAADELAAA
                     GINAEVIDPRSISPLDVDTIATSVKKTSRLIVVHEAVEQGGIGAEIVARLQEKAFYYL
                     DSPIIRVAAPFAPVPSGPTLEKEFLPGKERIVAAVREVTARC"
     gene            1045..>1637
                     /locus_tag="VLM90_02160"
     CDS             1045..>1637
                     /locus_tag="VLM90_02160"
                     /inference="COORDINATES: protein motif:HMM:NF024739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ11786.1"
                     /translation="MNGRYIAPALLLAVAFLLSFSRPVGAQNVEELLDKINRLNAAER
                     HQRLIDGARKEGELVWYSTMNRENSQELINLFQKDHPYVRVKLLNGSAVQTMTRISSE
                     YSARSYLFDITHIRGLFLIPLRKRQIIAAYRSPFRDTLRPGYRDNEGYFNAIFTQGQM
                     FLANRNLLKPQDYPKSIEDLLAPKWKGQLGMDDESYD"
BASE COUNT          359 a          488 c          454 g          336 t
ORIGIN      
        1 gacgccattc gcttcggtct tgccgaagaa atgcgccgcg atgctaccat gtacgttttc
       61 ggcgaagacg tcgccctcgg cggccctttc ggcgtcacca aaggacttgc ggaggaattc
      121 ggcgccaatc gcatggtgaa cacgccgatc agcgagggca cggtcatggg cctcgccgtc
      181 ggcgcggcga cggccgggct caggccgttg gtggaaatca tgttcataga ctttatcacc
      241 ttggccatgg atcagttggt caaccacgct gccaagctgc attacatgtc gggcggccag
      301 ctcaagatcc cgctgactgt tcgcgtgcag tgcggcatca gcggcgccat gggcgcgcat
      361 cactcgcaaa gccttgaagc gtggttggct catgtacccg gcttgaagat cgtcatgccg
      421 tccaatccag ccgacgccaa aggcttgctg aaagcagcga tccgcgatga caacccggtc
      481 gtgttcatcg agcatcgcgg tctctactgg tcgaagggag aagtttccga agctgacgtc
      541 acggtgccgg taggcgtagc caaagtattg cggccaggcg accaggtcac gatcgtcgcc
      601 ctggcaaaca tggtcggtcc ggcgctggcc gcggccgatg aattggcagc cgccgggatc
      661 aacgccgaag tgatcgaccc gcgcagcatt tcaccgctgg atgtcgacac gatcgctacg
      721 tcggtcaaga aaaccagccg gctgatcgtc gtccacgaag cggtcgaaca aggcggcata
      781 ggtgccgaaa ttgtagcgcg gctgcaagag aaagctttct actatctgga cagtcccatc
      841 atccgcgttg ccgcgccttt cgcaccggtt ccctccggcc cgacgctgga aaaagaattt
      901 ctcccaggca aagagcgcat tgtcgcagcg gtgcgcgaag tcaccgcccg atgctgattc
      961 gagttggaat tgacagcaga ccccgcgtgc cataagtttg cctccggctg cttcggattc
     1021 acgttcaccc gtcgaggaga caaaatgaac ggacgatata tcgcgcccgc tttgttgctc
     1081 gccgtcgctt tcctgctttc attctcacgt cccgtcggcg cgcaaaacgt cgaagagctg
     1141 ctcgacaaaa tcaatcgtct gaacgccgcg gaacgccacc agagactgat cgacggcgcg
     1201 cgcaaagaag gcgagctggt ctggtactcg accatgaacc gggagaactc gcaggaactg
     1261 atcaatcttt ttcaaaaaga tcatccctac gttcgcgtaa agctcttgaa tggtagcgcc
     1321 gttcaaacca tgactcgtat cagctccgag tacagcgcta gatcttatct tttcgatatc
     1381 acccatatcc gcggcctttt cttgatcccg ttgcgcaagc ggcaaattat cgccgcttac
     1441 cggtcaccgt ttcgcgacac tcttcgccct ggctatagag ataacgaggg ctatttcaac
     1501 gcgatcttca cccaaggaca aatgtttctg gcaaaccgaa acttgctcaa gccgcaggat
     1561 tatccaaagt cgatcgagga cctgctcgca cctaaatgga aaggccaact cggcatggat
     1621 gatgagtctt acgattg
//
LOCUS       DATIRS010000174         2465 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1193301, whole genome shotgun sequence.
ACCESSION   DATIRS010000174 DATIRS010000000
VERSION     DATIRS010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2465)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2465)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2465
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1193301"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            422..1288
                     /gene="prmA"
                     /locus_tag="VLM90_02165"
     CDS             422..1288
                     /gene="prmA"
                     /locus_tag="VLM90_02165"
                     /inference="COORDINATES: protein motif:HMM:NF018076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HSQ11787.1"
                     /translation="MTESWLHLTVHTSAACLDAVANFLTESGSSGVVLKRRAVEAYFP
                     NNRNAAALKRAVHRFVMDVVKLQGRSSKPRLSWQIARPENWRNSWKRFIRPSRVGKQF
                     WVTPPWLTPPQFRSRQVITIEPGMAFGTGTHATTRGCLEFIEQVAALLPPVKFTALDV
                     GTGSGILAIALAKLGAKRVWALDNDPVALGVAQENFQVNRVADKVQLSETSLSRLKRK
                     FLVVVGNLTAETIVALASAMAPRVAAGGYLILSGILHDKAASVLRCFVPRFRVVKRQR
                     AREWVTLLLQRR"
     gene            1295..2035
                     /locus_tag="VLM90_02170"
     CDS             1295..2035
                     /locus_tag="VLM90_02170"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: protein motif:HMM:NF008692.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HSQ11788.1"
                     /translation="MARFFVRKENIQATSATIAGQELEHLRRVLRLTAGDVVTLFDDT
                     GWEHEAVIRTLHADRGELEIRHSYDAGRESPLALTLALGLTKGEKMDFVVEKATELGV
                     GSIMPFTSSFTVPKLDDKRIAKRTERWQKIALSAAKQCGRTRVPKILPLCEFDAMVEG
                     AGASQLKLLFWEKETARSLRQVHEANATATAILVAVGPEGGLSSAEAQLAAARDFHTV
                     HLGRRILRAETAAVTALSLVQFLWGDLI"
     gene            2130..>2465
                     /locus_tag="VLM90_02175"
     CDS             2130..>2465
                     /locus_tag="VLM90_02175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11789.1"
                     /translation="MAADELCGKCGAKLLHRRVLMGVPKPENFSLTAEENQPDVDEDA
                     ACDEREFPSRAELARLGNPTPPTPEPMAGVRWGGFFRRANALTIDLFVIVLLSSIMGA
                     MAYVGYKVGL"
BASE COUNT          489 a          679 c          767 g          530 t
ORIGIN      
        1 tttcatcggc agttcctttc agtgtgacta ttttcaatat ctggaagtgg cgattttgac
       61 aagctggcgg ggcgaaaagc gcagtagtgt tgcatccgaa cctcggaata tctcccgcaa
      121 agccgtcaag gccgcaaagg acaagtaaca tgtcatttcg accgaaggaa gaaatctttc
      181 cgagatccct cgtataacct cgggatgaca ggcctcggcc cgtcactttg cgcctttgcg
      241 ggaggaattt cccaatccga taactttcgg ttgtccccgg cggcgcaacc caggcgagat
      301 ttctcgctgc gctcgaaatg acaggtcatg ggttgctggc attccggagg cgacggcaga
      361 ttgtccaact gaacagccat cgatcaattg atccactggc atcgctgtgg cataaaaaac
      421 cgtgactgaa tcctggttgc atctcacggt tcataccagc gccgcctgtc tggacgccgt
      481 cgcgaacttt ttgaccgaga gcggctcgtc gggcgtcgtc ttaaagcgcc gggcggtgga
      541 ggcttatttc cccaataatc gcaatgccgc ggcgctcaag cgcgcggttc accgcttcgt
      601 catggatgtt gtcaaactcc aaggccgcag cagcaagccg cgcttgtcgt ggcagatcgc
      661 aaggccggaa aactggcgga actcttggaa gcgctttatc cggccgagcc gggtcggcaa
      721 acagttttgg gtaacgccgc cctggctaac gccgccgcag tttcgctcgc gccaggtaat
      781 caccattgag cccggcatgg ctttcggcac cggcacccat gcgaccacgc gcggctgttt
      841 ggaatttatc gagcaggtcg cggcgttatt gccaccggtg aaattcaccg cgctcgatgt
      901 cggcaccggc tcgggaatcc tggcgatcgc gttggcgaag ttgggggcaa agcgggtgtg
      961 ggcgctggac aacgatccgg tggcgcttgg cgtcgctcag gaaaattttc aagtcaatcg
     1021 agtagctgac aaagtccagc tgtccgagac ctcgcttagc cgcctcaaga gaaagttcct
     1081 cgtcgttgtc ggaaatctta cggcggaaac gattgtcgcg cttgccagcg ccatggcgcc
     1141 gagagttgcg gctggcgggt atttgatttt gtccggcatc ctgcatgaca aggcggcctc
     1201 ggtgctgcgc tgttttgtgc cgcgctttcg cgtcgtcaaa cgccagcggg cgcgcgagtg
     1261 ggtgacattg cttttgcaac gacgctagca aatcatggct cgattcttcg tccgcaaaga
     1321 gaatattcaa gcgaccagcg cgaccatcgc cggccaggag ctggagcatt tgcgccgcgt
     1381 gctgcgcttg accgcgggcg atgtcgtgac gctgttcgat gacaccggct gggaacatga
     1441 ggcggtgatt cgcactcttc acgccgatcg gggagaactg gaaattcgtc attcttatga
     1501 cgccgggaga gaatctccac tggcgctgac tttggcgctc gggttaacca agggcgaaaa
     1561 gatggacttc gtcgtcgaga aggcgacgga gctcggcgtc ggctcgatca tgccgttcac
     1621 ttcaagtttt accgtgccca agctcgacga caagagaatc gccaaacgca ccgagcgttg
     1681 gcagaagatc gcgctgagcg cggcgaaaca atgcggccgg actcgggtgc cgaagatttt
     1741 gccgctgtgc gagttcgatg cgatggttga gggtgccggc gcgagccagc tcaaattgtt
     1801 attctgggaa aaggagacgg cgcgatcgct gcgccaggtg cacgaggcga atgctaccgc
     1861 gaccgcgatc ttagtcgccg tcggccccga gggcggctta agcagcgctg aggcccaatt
     1921 ggcagcggcg cgggatttcc acaccgtcca tttaggccgg cgcattctgc gcgctgagac
     1981 tgcggcggtg actgctttat cgttggtgca gttcctttgg ggtgatttga tttagcgcgg
     2041 cttgccttgg cgcggcacaa cttttagcat gattaattag aatgtttgct gaacaaaact
     2101 tgaaatgcca gaactgtgaa gctccagtcg tggccgccga cgaactttgc ggcaagtgcg
     2161 gcgctaagct gttgcaccgc cgggtgctca tgggcgtgcc gaagccggag aactttagtt
     2221 taaccgcgga ggaaaaccag cctgacgttg acgaggatgc cgcgtgcgac gaacgggagt
     2281 tcccaagtcg ggctgagttg gcacggttag ggaatcctac gccgccaacg ccggaaccga
     2341 tggcaggcgt gcgctggggc ggctttttcc gccgcgccaa tgcgttgacc atcgatctgt
     2401 tcgtgatcgt tttgctatcg tcaatcatgg gtgctatggc ctacgtgggc tacaaggtcg
     2461 gcctc
//
LOCUS       DATIRS010000175         1677 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_996695, whole genome shotgun sequence.
ACCESSION   DATIRS010000175 DATIRS010000000
VERSION     DATIRS010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1677
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_996695"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(109..1131)
                     /locus_tag="VLM90_02180"
     CDS             complement(109..1131)
                     /locus_tag="VLM90_02180"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ11790.1"
                     /translation="MIKKLFLVGLIFAGLLNSGAPALSQEQFYRGKLLRIFVGFPPGG
                     GYDTYARLLARHWGKHIPGNPTIAVDNMSGAGSMISANHMYKVAKPDGLTVGHFIGGL
                     FLQQLLGKPGIEFDARKFEYVGAPAQDVFIIGVSKASGITSMQQWQAAKTAVKFGGAG
                     FGAGTDDIPAMVREVFGVPIQIVAGYKGTADIRLAFNNGEIHGIGNSWQSTRSTWRNE
                     MDSGQLNILLHVAFKSHPELTKYPLAGDLVKNEEARKLMQAVTFAHGASVRPLVLPPN
                     TPKERVQLLRKAFMDTLVDGDFVAEAKKGNLEINPVNGEDLAKSVQSVLQLEPGLVAK
                     LKDILK"
     gene            complement(1204..>1677)
                     /locus_tag="VLM90_02185"
     CDS             complement(1204..>1677)
                     /locus_tag="VLM90_02185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11791.1"
                     /translation="GYKGTSDIRLATESGELAGSCLSWDSYKTTWRKQIESGEVSPII
                     QVMPKKHPELAAVASAMDYAKTDEAKKLIKHGAYDLAYSARPYFLAPGTPKGRVQILR
                     KAFADVLKDADLLAEAKKANFVIEYVPGEELAAIGHGLSKIDTAFAAMMKQILVP"
BASE COUNT          327 a          502 c          460 g          388 t
ORIGIN      
        1 aatgggcttc gaaatgacgg ccggtgcatt tctttgctta cggctcctca ttatttaact
       61 cgccattcca ttcgccggtt cttgcgaccg cgcaaatcca gcctggagtt atttcagaat
      121 atcctttagc ttcgccacca accctggctc cagctgcaac acgctctgca cgctcttcgc
      181 tagatcttcg ccattgaccg gattgatttc taaattgcct tttttcgctt cggcgacaaa
      241 atcgccgtcg accagggtgt ccatgaaggc tttgcgcagg agctgcacgc gctctttggg
      301 cgtgttgggc ggcaatacca aggggcgcac cgaggcgcca tgggcgaacg tcacggcttg
      361 catcagcttc ctcgcctctt cgtttttcac caggtcgcct gccagcggat atttggttaa
      421 ctcggggtgg gacttgaagg cgacgtggag caggatattc aattgtcccg agtccatctc
      481 gttgcgccag gtcgagcgcg tcgattgcca ggagttaccg atgccatgaa tctcgccatt
      541 gttgaatgcc aggcggatat ccgccgtgcc tttgtagccg gcgacgattt gaatcggcac
      601 gccaaatacc tcgcgcacca tcgcggggat gtcgtcggtg ccggcgccaa acccggcgcc
      661 gccaaacttg accgcggtct tagcagcctg ccattgctgc atgctcgtga taccggaagc
      721 tttcgaaaca ccgatgataa atacgtcctg cgccggggcg ccgacatatt cgaatttgcg
      781 cgcgtcgaac tcgatgcccg gtttgccgag cagctgctgc aaaaacaacc cgccgatgaa
      841 atggccgacc gtcaagccgt ccggtttggc gactttatac atgtgattgg ccgatatcat
      901 gctgccggcg ccgctcatat tatcgacggc gatggtcggg ttgcctggaa tatgcttgcc
      961 ccaatgacgc gccaaaagcc gcgcataggt atcgtagccg ccgccgggcg gaaagccgac
     1021 gaagatgcgc agtagtttgc cacggtaaaa ctgctcctgg cttaacgccg gcgcgccgct
     1081 attcagtaat ccggcgaata ttaaacccac gagaaacagt ttcttgatca tccctgccct
     1141 ctcctgctcg agaccgaacc ttgaactttt gaacccttga accttgaacg atccgtgccg
     1201 tccctacggc acgagaatct gcttcatcat ggccgcgaag gccgtatcga tcttggagag
     1261 cccgtgaccg atggctgcta gttcctcgcc gggaacatac tcgatgacga agttcgcctt
     1321 cttcgcctcg gcgagcaagt cggcatcctt gagcacgtcg gcaaacgctt tgcgcaaaat
     1381 ttgcacccgc cccttgggcg tcccgggggc gaggaaatac ggccgcgccg aataggccag
     1441 atcgtaggct ccatgtttga tcagcttttt tgcttcgtcg gttttcgcgt agtccatcgc
     1501 cgaagcgacc gcggccagct cgggatgttt cttcggcatg acttgaatga tcggactgac
     1561 ctcgccggac tcgatctgtt tgcgccaggt ggttttgtag gaatcccaag agagacaact
     1621 gccggcgagc tcgccgctct cggtcgccag acgaatgtcc gaagtgcctt tgtagcc
//
LOCUS       DATIRS010000176         3175 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1881270, whole genome shotgun sequence.
ACCESSION   DATIRS010000176 DATIRS010000000
VERSION     DATIRS010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3175)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3175
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1881270"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            160..906
                     /gene="fabG"
                     /locus_tag="VLM90_02190"
     CDS             160..906
                     /gene="fabG"
                     /locus_tag="VLM90_02190"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: protein motif:HMM:NF009466.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein]
                     reductase (NADPH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] reductase"
                     /protein_id="HSQ11792.1"
                     /translation="MANIQGQIALVTGASRGIGRAIALALGQAGAHVVINYKGNQAAA
                     EETQSLLQAAGGSGELRVFDIADETQVEAAVKNIVDAHKTLDILVNNAGVTSDSLLMR
                     MKASDWDQVIGTNLKGTILCTKVVSRQMIKQRAGRIVNLSSVVGQMGNVGQSLYAASK
                     AGIIGFTKAMARELASRAITVNAVAPGFIDTEMTARLPEKLREDFLRSVPLGRFGTCQ
                     EVADMVVFLAGPTGSYVTGQVFNVNGGLYM"
     gene            932..1168
                     /gene="acpP"
                     /locus_tag="VLM90_02195"
     CDS             932..1168
                     /gene="acpP"
                     /locus_tag="VLM90_02195"
                     /inference="COORDINATES: protein motif:HMM:TIGR00517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HSQ11793.1"
                     /translation="MAGSIKDRVKEIVCEQLGVSAEEVTPEASFIEDLGADSLDIVEL
                     VMALEEEYEMEISDEDAEKIKTVQDIITYIEAHR"
     gene            1248..1814
                     /gene="rpiB"
                     /locus_tag="VLM90_02200"
     CDS             1248..1814
                     /gene="rpiB"
                     /locus_tag="VLM90_02200"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: protein motif:HMM:NF004051.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HSQ11794.1"
                     /translation="MLQHRLVVACALAFGIFSVASGYDLWFGQHDIMIAIGCDHGGVE
                     LKDNLVDYLRAKGVEVCDFGTQGRESVDYPDYGRGVSARVSAGQAERGVLICTSGIGM
                     SIVANKFPGVRAALVGDLDGARSSREHNDANILVLSGARTAAPLAQAIVDTWLNTEFA
                     GGRHQRRIDKITQVEQEFAKGSKVQLQP"
     gene            1945..3102
                     /gene="glyA"
                     /locus_tag="VLM90_02205"
                     /pseudo
     CDS             1945..3102
                     /gene="glyA"
                     /locus_tag="VLM90_02205"
                     /inference="COORDINATES: protein motif:HMM:NF000586.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
BASE COUNT          691 a          859 c          965 g          660 t
ORIGIN      
        1 aagagtcggt taagcagctg tgcgcgttag gctgtcaacg cgccttggaa atcggccccg
       61 gcaaggtgct caagggcttg aacaagcgta tcgcgccggc gctggaaacc ggtaatctcg
      121 aaactcccca ggatctgcca agtctgaaag ccgcttagca tggcaaatat tcaaggtcag
      181 atcgcgttgg tcaccggcgc tagccgggga atcggcaggg cgattgcact ggctctcggc
      241 caggccggcg cccatgtggt gatcaattac aaaggcaacc aggccgcggc ggaagaaacg
      301 caaagcttat tgcaggctgc tggaggtagc ggcgagctcc gcgtcttcga tatcgccgat
      361 gagacccagg tcgaagccgc ggttaaaaat attgtcgacg cgcataaaac cctcgacatc
      421 cttgtcaaca atgccggggt cacctcggat agtttgctga tgcgcatgaa ggccagcgat
      481 tgggatcaag tcatcggcac caatcttaaa ggcacgatcc tgtgcaccaa agtcgtctcg
      541 cgccaaatga tcaagcagcg ggccgggcgc atcgtcaatc tctcgtcggt ggtcggccaa
      601 atgggtaacg tcggccagtc gctttatgcc gcgtccaaag ccggcattat cggttttacc
      661 aaggcgatgg cgcgggagtt ggcgtcgcgc gcgattaccg tcaacgcggt cgcgccgggt
      721 ttcatcgaca ccgaaatgac cgcgcgtttg ccggaaaaac tgcgcgagga ctttcttcgt
      781 tccgttccct tggggcgctt tggcacttgc caggaagtcg ccgatatggt tgtgtttcta
      841 gccggcccta ccggcagcta tgtgaccgga caagtattta acgtcaacgg cggattatac
      901 atgtgaggat actaagagga ggtaagcgaa gatggcggga tcgattaagg atagagtgaa
      961 ggaaatcgtt tgcgagcaac tcggcgtgag tgccgaagag gtaaccccgg aggcttcgtt
     1021 catcgaggat ttgggcgcgg actcgttgga catcgtcgag ctggtgatgg cgctggaaga
     1081 ggaatatgag atggaaatct ctgacgaaga cgccgagaag atcaagaccg ttcaggacat
     1141 catcacctac attgaggcgc atcgataacc gcccttgtcc gtacgccgtt gctcagtgaa
     1201 ccggcggccg gcgccgcgga ctttgtcact gcaatatcga gttcgagttg ctgcagcaca
     1261 ggctagtcgt tgcctgcgct ttggcgtttg gcattttctc agtggcctcg ggctatgatt
     1321 tatggtttgg acagcacgac atcatgatcg ccatcggctg tgaccacggc ggcgtggagt
     1381 taaaagataa tctcgtcgac tatctgcgcg ctaagggcgt tgaggtctgc gatttcggca
     1441 cccagggccg ggagtcggtg gactatcccg actacggcag gggagtctcc gcgcgagtgt
     1501 ccgccggcca agccgagcgc ggcgtgttga tctgcaccag cggcatcggc atgtccatcg
     1561 tcgctaacaa attccccggt gtgcgcgcgg cgttggtggg tgatctagac ggcgcgcgtt
     1621 cgagccgcga acataacgat gccaatattt tggttttgag cggcgccaga acggccgcgc
     1681 cactggcgca agcgattgtc gatacttggc tcaacaccga gtttgccggc ggccgccacc
     1741 agcggcggat cgataagatt acccaggttg agcaggaatt tgccaaaggc tctaaagttc
     1801 agcttcaacc gtaaagtttc caaagaagga aaagtcatgt catttctcga acaggtagac
     1861 gcggaagtgt tcgccgcgat tcaacgagaa acccgccgct tggaggagaa tctcgaactc
     1921 attgcttcgt aaaacgtcgt cagcgaagcg gtgctggaag cccagggctc ggtgatgacc
     1981 aacaaatacg ccgagggtta tccgggcaag cggtattacg gcggttgtga gtttgtcgac
     2041 gaagtcgaat ccctggcgat cgccagggcg aaagaactgt tcggcgccga acacgccaat
     2101 gttcagccgc actccggctc ccaggccaac atgaccgttt acctggcggt gttgaaaccg
     2161 ggcgacagct atctcggcat gaatctggct cacggcggcc atttgtcgat gggcagtccg
     2221 gtaaattttt ctggttttat ctacagcgtg attccctatg gcgtttccga gaagactgaa
     2281 accatcgact acgatgaggt cgagcggctg gccaaggagc atcggcccaa gttggtcatc
     2341 gccggcgcca gcgcttatcc acgcatcatc gacttttcgc gctttcgcaa gatcgccgat
     2401 gacattggcg ctttattaat ggtcgacatg gcgcatatcg ccggcttggt agcggcgggg
     2461 ctgcatccga gtcccgtgcc ctacgccgat ttcgtcacca cgacgacgca taaaaccttg
     2521 cgcgggccgc gcggcggcat ggtgctgtgc aaggcggagc atgcgaagat tgttgacagc
     2581 cgggtctttc ccggcatgca gggcgggccg ttgatgcatg tgatcgccgc caaagcggtg
     2641 gcactcaaag aagcgttgag cccggagttc aaaatctacc aacagcagat cgtcaaaaat
     2701 gctcaagccc tggcgcagtc gctgatcgcc aatggttttc gcttaacctc cgacggcact
     2761 gacaatcatc tgatgctggt cgacctgcgc aaatcggagc tgactggcaa agttgcccag
     2821 gaaaccttag acaaggcgcg catcaccgtc aacaagaacg gcatcccgtt cgacacccgg
     2881 tcgccgttcg tcaccagcgg gattcgcatc ggcacgccgg cggtgaccag ccgcggcatg
     2941 aaagaagcag aaatgggcca gatcggcgac ttgatcgccc gggcgttggg cgcggtcggc
     3001 gatgacagca aactacgcgc ggtggctgat gatgtcggca ggctgtgcac cagttttccc
     3061 gtctatccgc atcgtttagc gcagcattcg ttgggtcgat gatggaggct cgagaataga
     3121 gcatggggat taggatttta gatcctctat cttccatcct ctatcctcga attta
//
LOCUS       DATIRS010000177         2179 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1783353, whole genome shotgun sequence.
ACCESSION   DATIRS010000177 DATIRS010000000
VERSION     DATIRS010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2179
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1783353"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..346
                     /locus_tag="VLM90_02210"
     CDS             <1..346
                     /locus_tag="VLM90_02210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11795.1"
                     /translation="IKGKGFSMFWRQGEEPKRYDWQDGSVFTPPAMMWHQHFNTGATG
                     ARYLPPRLGGIKYSLGEGFGDITKVDKDVKAGGNQIEYFDEDPNIRKMFEEELAKSGT
                     TTKMDPNFYKRP"
     gene            507..869
                     /locus_tag="VLM90_02215"
     CDS             507..869
                     /locus_tag="VLM90_02215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11796.1"
                     /translation="MVIGFLVSANRAHAAEAVGQKATVSGTPATQGIGAAKSAAPAVA
                     KSEKSPPATATAAPVEVARATPTDGKSPSLLKLLEAHETEVKIALVVGGVAFVLGWVC
                     GGLYSVRRERKYRRRLRL"
     gene            894..1490
                     /gene="plsY"
                     /locus_tag="VLM90_02220"
     CDS             894..1490
                     /gene="plsY"
                     /locus_tag="VLM90_02220"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR00023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008374 - O-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HSQ11797.1"
                     /translation="MEIVALIVFAYLLGSIPTGYILGKFAGVDVRQVGSGNVGATNVA
                     RAVGKWQGVLTLLADAMKGMLPAAIGLTMMLPSAAIAALSAAAFLGHLYPIFLNFRGG
                     KGVATALGALLVIAPLASLLLVAIFAAVVFPTRLVSLSSIVAAASAPFALWLFLQPRA
                     IVLLGAFLAAMIVWRHRGNIQRLRAGTEPRFDAHSSSD"
     gene            complement(1487..>2179)
                     /locus_tag="VLM90_02225"
     CDS             complement(1487..>2179)
                     /locus_tag="VLM90_02225"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HSQ11798.1"
                     /translation="LSTNALLLAAAVLSGCAGGEITTREKGAGIGAVGGAAAGGLIGA
                     AVGRPGVGAAVGGVLGLGTGALIGDQLQGQENRQKEQQKSIDQQRVELEKNRALIEEL
                     KKNKIEAKETSRGVMVNLPSVNFEFDSADLSRDGRERVNQIANIIRRDAPDRRITVEG
                     HASRESAAAEAYNQRLSERRAATVADSLERSGVNGRNISSQGVGTRAPVASNDSESGR
                     QQNRRVEVIIEN"
BASE COUNT          381 a          627 c          666 g          505 t
ORIGIN      
        1 catcaagggc aaaggtttct cgatgttttg gcgccagggc gaggagccga aacgttacga
       61 ttggcaggat ggcagcgtct tcacaccgcc ggcgatgatg tggcaccagc acttcaacac
      121 cggcgccacc ggggcacgct acttgccgcc gcgtttgggc gggatcaagt acagcctggg
      181 tgagggcttt ggcgatatca ctaaagttga caaggacgtc aaagccggcg gcaatcaaat
      241 cgagtacttc gacgaggacc ccaacatccg caagatgttc gaggaagagc tcgccaagtc
      301 cggcacgacg accaagatgg atccgaattt ctacaagagg ccttaatcgt catcgtttat
      361 tttggtttat cagccccgca gggtgatgcc ctgcggggct ttttgcattg gccgcggcaa
      421 ttgaagaaaa ttcgttgagc cgcaatcgac ggttgtgtta gattgagcca atgactggtc
      481 gctgtcgcaa tttttcccgc tgcttgatgg tcattggatt cttggtgagc gccaatcgcg
      541 cccatgcggc tgaagcggtt ggacaaaaag ccacggtgtc cggaacgccg gcgacccagg
      601 gaattggtgc cgccaaaagc gccgcaccag ccgttgccaa aagcgaaaaa tcgccgccgg
      661 caacggcaac cgccgcgccg gtggaagtgg cccgagccac tccgacggat gggaaatcgc
      721 cttccttatt aaaattgctt gaagcccatg aaacggaagt caagatcgcc ttagtggttg
      781 gcggtgttgc tttcgtcttg ggctgggttt gtggcggtct ctactccgtc cggcgcgagc
      841 gcaagtaccg gcggcgcctg cgtctctagg ctggcgcgcg gtcgccctga cgcatggaaa
      901 tcgtcgcgct aattgttttt gcctacctac tcggctcgat cccgacaggc tatattctgg
      961 gcaagtttgc cggggttgat gtgcgccaag tgggcagcgg caatgtcggc gcgaccaatg
     1021 tcgcgcgggc ggtaggcaaa tggcagggcg ttttaacttt gctggcggat gcaatgaaag
     1081 gcatgctgcc ggcagcgatc ggtcttacga tgatgctacc atcggcggcg attgcggcgc
     1141 tctccgccgc ggcctttctt ggtcatctct atccgatctt tttgaacttt cgcggcggca
     1201 aaggggtggc gacggcacta ggagcgctcc tagtcattgc gccgctggcc agtttactgt
     1261 tggtggcaat cttcgctgcg gtggtttttc ctacccgcct ggtgtcgttg agctcgatcg
     1321 tcgcagccgc ctcggccccg ttcgcgctct ggctgttttt acagccccga gcgatcgtcc
     1381 tgctgggggc ttttcttgcc gcgatgatcg tctggcgtca tcgcggcaat attcagcgtt
     1441 tacgagccgg taccgagccg cgctttgacg cgcattcaag ttctgattaa ttttcgataa
     1501 tcacttcgac gcggcgattc tgctgccgtc cactttcgct gtcgttgctc gccacgggag
     1561 cgcgggtgcc gaccccctgg gacgaaatgt ttctgccgtt gacgccgctt ctctccaagc
     1621 tatcagccac ggtggcggcg cgccgttccg ataagcgctg gttgtaggct tcggcggcgg
     1681 cgctctcccg gctggcgtgg ccttcgacgg tgatgcggcg atcgggcgca tcgcggcgta
     1741 tgatgttggc gatctgattg actcgctcgc gaccgtcgcg cgagagatcg gcgctgtcaa
     1801 attcaaaatt gacgctcggc aaattgacca tgacgccgcg gctggtttcc ttcgcttcga
     1861 tcttattttt tttcagttct tcaatcagcg cgcgattttt ttcgagttcg actctttgct
     1921 ggtcaatgga tttctgttgt tccttttggc ggttttcctg gccctgcagt tgatcgccga
     1981 tcaatgcacc ggtgcccagg cctaacacgc cgccgacagc cgcaccgacg ccgggacggc
     2041 cgacggcagc gccaatcaag ccacccgcag cggcgccgcc gacggcgccg atgccggcgc
     2101 ctttttcacg agtggtgatt tcaccgccgg cacagcccga caggactgcg gcggccaata
     2161 gtagtgcgtt tgtggatag
//
LOCUS       DATIRS010000178         4050 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_111607, whole genome shotgun sequence.
ACCESSION   DATIRS010000178 DATIRS010000000
VERSION     DATIRS010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4050)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4050)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4050
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111607"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..390)
                     /locus_tag="VLM90_02230"
     CDS             complement(<1..390)
                     /locus_tag="VLM90_02230"
                     /inference="COORDINATES: protein motif:HMM:NF014769.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11799.1"
                     /translation="MDIHVSPQIERLIRDALDEDIGAGDLATMATISADARGKGLFRA
                     KKDGVVAGLVLLDRIFYFIDHRVEVRLLIKDGAAVKSGTVVAEAIGPVRALLLGERTA
                     LNFLQQLSGTATLTRKLVDAVKDFPCKV"
     gene            complement(395..3148)
                     /locus_tag="VLM90_02235"
     CDS             complement(395..3148)
                     /locus_tag="VLM90_02235"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF004349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HSQ11800.1"
                     /translation="MQLAKAYSHIDIESKWYRHWVDEKLFVPRAGAGKSYSIVIPPPN
                     VTGSLHMGHALNNTLQDILCRYKRMDGFRVLWVPGTDHAGIATQNVVERQLAERGTSR
                     AQLGREKFIERVWQWKKEAGDAILHQLRALGVSCDWSHERFTMDEGLSLAVREAFVRL
                     WEDGLLYRALRLINWCPRCKTALADIEVIHEEADGHLWHIRYPLADDSGESLIVATTR
                     PETMLGDTAAAVHPEDERYQHLLGKKIRLPITGRIVPLLADAYVDKEFGTGALKITPG
                     HDFNDFEIGERYNLDRISIFDADACVDGAAFLARGEAGSWIERYNGQERFAARKLVVA
                     ELADSGLLVKTEAHKLSLGRCYRCQTVIEPYLTPQWFVSIKPLAEPALQAVRDGRIKI
                     VPEGWCNSYYAWMENIKDWCISRQIWWGHQIPAWYCKSCESANLMQNADGDYLFTKDA
                     KPIVSRTQPHACPSCHGTELIQDPDVLDTWFSSGLWPFSTLGWPERNSDLKNFYPTAT
                     LVTGFDILFFWVARMIMMGLKFMGDVPFRDVYIHALVRDEQGQKMSKSKGNVIDPLDI
                     MSQYGTDAFRFTLAAMAAMGRDIKLAEDRIGGYQSFVNKLWNAARFVQMNAPEAGALN
                     PPAAAALNRGDLALADRWIRSRLAAAIAEARDAIDGYRFNDYANGLYQFIWHEFCDWY
                     IEMSKLALNGAIGDDRDGARRRLGELLDQILLLLHPVMPFVTEEIWQVIGNGRQSIMI
                     QQYPEAHPQWADGEAEKQMEYLMSVVRAIRNLRTELNCPPGKEVKAIFCGPQADRDFL
                     HGQERYLRSLARLGSVEYRAAGDGPKGAATAVVGASEIYLPLDDLINLDEERTRLAKE
                     VAKIEDEIARVQKKLNNNDFVAKAKEEVIQKERDKAVQFDEKLRTLRSSLEKIADLQA
                     GRN"
     gene            complement(3168..3635)
                     /locus_tag="VLM90_02240"
     CDS             complement(3168..3635)
                     /locus_tag="VLM90_02240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11801.1"
                     /translation="MLRYALAVALTPDHGIQFFDTLPESSALADVEAVIVDAATLRLA
                     EKPPLVDFKAIERWQVPTVWIDDRELSAPPARANWVNLRPPVQREQLHKALFECLNAP
                     AGAPPAARKIEPRAAAPIKARGQKSEKSAAAPPPAADNVIELVDVVEDEEGNN"
     gene            3747..3833
                     /locus_tag="VLM90_02245"
     tRNA            3747..3833
                     /locus_tag="VLM90_02245"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3781..3783,aa:Leu,seq:cag)
BASE COUNT          831 a         1236 c         1118 g          865 t
ORIGIN      
        1 aactttgcag ggaaaatctt tgaccgcatc gaccaatttt ctcgtcaaag tagccgtgcc
       61 ggacagttgt tgcaagaaat tcagcgccgt gcgctcgccc aggagcagcg cacgcaccgg
      121 tccgatcgct tctgcgacca cagtgccgga cttcaccgcg gcgccgtctt tgatcagcaa
      181 acgaacctca actcgatgat cgataaaata aaaaatccga tcgagcaaga ccaagccggc
      241 aaccacgccg tcctttttgg cgcggaacag ccccttgccg cgcgcgtccg ccgatatcgt
      301 cgccatggtc gccagatcgc cggcgccgat atcttcgtcc agcgcatcgc ggatcaaccg
      361 ttcaatctgt gggctgacgt ggatgtccat aaaattaatt ccttcccgct tggagatctg
      421 cgatcttctc taagctcgaa cgcagcgtgc gcagcttttc gtcgaactgg acggccttgt
      481 cccgttcctt ttggatcact tcttccttgg ccttggcaac gaagtcattg ttattgagtt
      541 tcttttgcac ccgcgcgatt tcatcttcga tcttggcgac ttccttggcc aagcgcgtgc
      601 gctcttcgtc gagattgatt agatcgtcca ggggcaaata gatttcactg gcgccgacca
      661 ccgcggtcgc cgcccccttg ggaccgtctc ccgcggcgcg atactccacg ctgccgagcc
      721 gggccagcga gcgcaagtag cgctcttggc catggagaaa atctcgatcg gcttgcgggc
      781 cgcaaaagat cgctttaact tccttccccg gcgggcaatt gagctcggtg cgcagattgc
      841 ggatggcgcg caccacgctc atgagatact ccatctgctt ttccgcctcg ccatcggccc
      901 attgcggatg cgcttcagga tactgctgaa tcatgatgct ttgccggccg ttaccgatca
      961 cctgccaaat ctcctcggtg acaaacggca tgaccggatg gagcagcaaa agaatctgat
     1021 ccaacagttc gccaagcctg cggcgcgcgc catcgcggtc gtcgccaatg gcaccgttca
     1081 gggcgagctt gctcatttcg atataccagt cacagaactc atgccagata aactgataga
     1141 gaccattggc atagtcgttg aaacggtaac catcgatggc atcgcgcgct tcggcgatgg
     1201 ccgcggccag gcgcgagcga atccaacgat ccgccagcgc gagatcgccg cggttcaatg
     1261 ccgctgcagc tggtgggttc aaagcaccgg cctcgggcgc attcatctgc acgaaacgcg
     1321 ccgcgttcca taatttattg acgaaactct ggtagccgcc gatgcgatcc tcggcgagct
     1381 tgatgtcccg tcccatggcc gccatcgccg ccaacgtgaa gcgaaatgca tcggtgccgt
     1441 actggctcat gatgtcgagg gggtcgatga cgttgccctt ggacttggac atcttctgcc
     1501 cctgctcgtc gcgcaccagg gcgtgaatgt agacatcgcg aaacggcacg tcgcccatga
     1561 acttgagccc catcatgatc atgcgcgcca cccagaagaa tagaatatcg aagccggtga
     1621 cgagcgtcgc tgttgggtaa aaattcttga ggtctgaatt gcgctccggc cacccgagcg
     1681 tcgagaatgg ccacagaccg gaggaaaacc aagtgtccag tacatcgggg tcttggatca
     1741 gctccgtgcc gtgacaactt gggcaggcat ggggctgggt gcgtgaaacg atcggcttgg
     1801 cgtctttagt gaatagataa tcgccgtcgg cgttctgcat caggttcgcc gattcgcagc
     1861 tcttgcagta ccaggcgggt atctgatggc cccaccagat ttgccgagag atgcaccagt
     1921 ctttgatgtt ctccatccag gcgtaatagg aattgcacca gccctcggga acgatcttga
     1981 tgcggccgtc gcgcaccgct tgcaacgccg gttcggccag cggcttgata ctcacgaacc
     2041 attggggcgt gagatagggc tcgatcaccg tctggcagcg ataacaacgc cccagcgaaa
     2101 gcttgtgcgc ttcggtcttc actagcaaac cgctatccgc caactcagcg acgacgagct
     2161 tgcgcgcggc gaagcgctcc tggccgttgt accgctcgat ccagctgccc gcttcgccgc
     2221 gggccaggaa tgccgccccg tcgacacagg cgtcggcgtc aaaaatactg atgcgatcta
     2281 aattgtaacg ctcgccgatt tcgaaatcgt tgaagtcatg ccccggcgtg atcttgagcg
     2341 cgccggtgcc gaactctttg tcgacataag catcggcgag caagggcacg attctgccgg
     2401 taatcggtag gcgaatcttt ttaccgagca agtgttgata gcgttcatcc tcgggatgga
     2461 ccgcggcggc ggtgtcgccc agcatggtct ccggccgcgt cgtggcgacg atcaaggact
     2521 cgcccgagtc gtcagccagc ggatatcgaa tgtgccaaag atggccgtcg gcctcttcgt
     2581 gaatgacttc gatatccgcc aaggcggtct tacagcgcgg acaccaattg atcagccgca
     2641 gtgcccggta aagtaaaccg tcttcccaaa gcctgacgaa cgcctcgcgc accgccaggg
     2701 aaagtccctc gtccatggtg aaacgctcat ggctccagtc gcaggagaca ccgagggcgc
     2761 gcaattggtg caagattgcg tcaccggctt cctttttcca ttgccacacc cgttcgataa
     2821 atttctcccg gcccaactgc gcccggctgg tgccgcgctc ggccaactgg cgctcgacga
     2881 cattttgcgt ggcgatgccg gcatgatcgg tgcccggcac ccataggacg cgaaatccgt
     2941 ccatgcgttt gtagcggcag agaatgtctt gcagcgtgtt attgagcgca tggcccatgt
     3001 gcaacgagcc ggtcacattg ggcggcggta tgacgatcga ataggattta ccggcgccgg
     3061 cacgggggac aaataatttt tcatcgaccc aatggcgata ccacttggat tcaatatcga
     3121 tatgagaata agccttagcg agttgcattt ttgtctaatc ctggagctca gttgttccct
     3181 tcctcgtcct ccaccacgtc gaccaattca attacgttgt cggcagcagg cggcggcgca
     3241 gcggcggatt tctcgctttt ctggccgcgc gcctttatcg gcgcagcggc gcgaggttcg
     3301 atctttcttg ctgccggcgg cgctccggcc ggtgcattga gacactcgaa cagcgctttg
     3361 tgcaactgct cgcgttgcac cggcggtctt aaattcaccc aattggcgcg cgccggcggc
     3421 gcagacagtt cccggtcgtc gatccacacc gtcggcactt gccaacgttc aatcgccttg
     3481 aaatctacca gcggtggctt ttcagccagc cgcaacgtcg ccgcatcgac gattaccgct
     3541 tcgacatcgg ccaacgccga tgattccggc agcgtatcga aaaactgaat tccatgatcc
     3601 ggcgtcagcg ccactgccaa tgcatatcgc agcataaggt tcggttctat gattaatagt
     3661 cgactcatct cggcccatca cgctggtcaa tcttgacaac cccacacccc caagctagat
     3721 acatatggtt gtcaacgagc tagtgcgcga aagtggcgga attggtagac gcgcaggact
     3781 cagaatcctg tggggtaaca gccgtggggg ttcgattccc ccctttcgca ccaacaaata
     3841 tctaacatac aagccagcga ttctctaacg ttcaccgctt tcatcccgcc aagaaacgtc
     3901 gcgctactcc ggccacgctt ctcctggggc taaacggcct gggcgcacaa tacgattgcg
     3961 aggaagcagc gaagctgcgg tgaatcgtcg ctgtgactag tgggagcctg tcatgcccag
     4021 gatcggccag ttcatcgtca ccgcactgct
//
LOCUS       DATIRS010000179         3366 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1488498, whole genome shotgun sequence.
ACCESSION   DATIRS010000179 DATIRS010000000
VERSION     DATIRS010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3366)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3366)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3366
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1488498"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..523
                     /locus_tag="VLM90_02250"
     CDS             <1..523
                     /locus_tag="VLM90_02250"
                     /inference="COORDINATES: protein motif:HMM:NF022077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="P-loop NTPase"
                     /protein_id="HSQ11802.1"
                     /translation="DQKNSLLTELDVMTDDLDLVLVDTGSGISDAVTYFTSAAQEIIV
                     VVTPELASITDAYALIKILVSAHGRKRFAILANNVADQAQARRLFDTLSGTALRFLNA
                     SLDFLGWIPRDPQLLRAMAQARTVVTEAPDAPSSRAFATLAEQFMRMAGRSKVKGNMQ
                     FFFRRMLEAEVAL"
     gene            520..1350
                     /locus_tag="VLM90_02255"
     CDS             520..1350
                     /locus_tag="VLM90_02255"
                     /inference="COORDINATES: protein motif:HMM:NF005413.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FliA/WhiG family RNA polymerase sigma factor"
                     /protein_id="HSQ11803.1"
                     /translation="MIQAAKTRSPARSGRPELDPAKEAMIAQYLPLARFVAEKVHRRL
                     PPGVDLESLVHSGVIGLLEALDRFDPKRGVEFEVYARYRIQGEVMQCLRSLDWVSRSV
                     RSWGRKMESARVKLAVQLVREPTADEMANELAIPLENYYRLDQQLNDATLLSLEDLSM
                     GSANEREGSRRESIQNLDFDPLTLVESKDLIDKLGSAVKGLPERERLVITLYYYEELT
                     LKEIGEILNLSEGRICQIFAQTVGRLRAALGIAVKPKPGGKRGAETRKAPSAVKPVRV
                     "
     gene            1412..1627
                     /locus_tag="VLM90_02260"
     CDS             1412..1627
                     /locus_tag="VLM90_02260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11804.1"
                     /translation="MADSINRIVPPSVSVDRGRQVGRERPKEKSGAERRKPHHGGADA
                     PENHSEEPGAEPDDATKDKGKHLDISV"
     gene            1670..2215
                     /locus_tag="VLM90_02265"
     CDS             1670..2215
                     /locus_tag="VLM90_02265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11805.1"
                     /translation="MEIIIFELSAGLLLAAIVLLSRRQRAAAQKRGAVELQRGEEPAR
                     LAAQAQQACLNGLEKLHDSLSSLDQRTTAVERNLDSLMAAPLPERRQHYEAAALLLAA
                     GLDGDRIAGVLGFPLAQVEMIGDLRRILGTGVKTNPEVEPPQPVRTAKRKALTRSAKA
                     RPQPVLLTDIVEAAHALNGAA"
     gene            2302..2901
                     /locus_tag="VLM90_02270"
     CDS             2302..2901
                     /locus_tag="VLM90_02270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11806.1"
                     /translation="MTDMMIFVSAVLSLGLVALCALKWRRRKAGVEMKNDSVAQLEDV
                     LRAAELSNASFFQSLQLVQKNLESLLTRAESAEQRLRALMLQPGGEKKEQYAAAALLL
                     GDGQEPQRVASMLNLPLPQVQLVRELQRMTIKERSPAARKGGEEPSPKRESQPQTKIA
                     APREKTAADPMRLVDVIRKATSEAAKRENELHHFNGINA"
     gene            2965..3261
                     /locus_tag="VLM90_02275"
     CDS             2965..3261
                     /locus_tag="VLM90_02275"
                     /inference="COORDINATES: protein motif:HMM:TIGR03506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein"
                     /protein_id="HSQ11807.1"
                     /translation="MYKALSGAVVEMRRLETASQDLANINTAGYKGQRLAFSEVLAKR
                     VAPEDRPGGFVAVAGQRTNLHQGAIEGSGNPFNLALEGDGYFGIQSPRGVRIAK"
BASE COUNT          727 a          964 c         1067 g          608 t
ORIGIN      
        1 cgatcaaaaa aattccctat tgaccgaatt ggatgtcatg accgatgacc tcgatctcgt
       61 gctggtcgat accggcagcg gtatttccga cgcggtgact tattttacca gcgcggcgca
      121 agaaatcatc gtggtggtca cccccgagct cgcctcgatc accgacgcct acgctttgat
      181 taagatattg gtctcggcgc atggacgaaa acgttttgcc attctcgcca acaacgttgc
      241 tgaccaagcc caggcacggc gcttgttcga caccttgtcg ggcaccgcgc tgcgctttct
      301 caatgcctcg ctcgactttc ttggctggat cccgcgcgat ccgcaactgc tgcgcgccat
      361 ggcgcaggcg cgcacggtgg tgacggaggc gccggatgcg ccgtcaagcc gggcgtttgc
      421 cacgctggcc gagcaattta tgcggatggc cggtcgcagc aaggtcaaag gcaatatgca
      481 atttttcttt cgccgtatgc tcgaagcgga ggtcgcctta tgattcaggc ggccaaaacc
      541 agatcgccgg cacgctccgg ccggcccgaa ctagatccag cgaaggaagc gatgatcgcc
      601 cagtatctgc cgctggcgcg ctttgtcgcc gagaaagtgc accggcgctt gccgcccggc
      661 gtcgacctcg aatcgctggt gcactccggg gtcatcggcc tgttggaggc gctcgaccgg
      721 ttcgatccca agcgcggcgt cgaattcgaa gtctatgccc gctaccgcat ccagggcgaa
      781 gtgatgcaat gcttgcgctc cctcgattgg gtgagccgct cggtacgctc ctggggccgc
      841 aagatggaat cggcacgggt caaattggcc gtccagctgg tgcgcgagcc gaccgcagat
      901 gagatggcta acgagttggc gatcccgctg gaaaattatt atcgcctcga ccaacagctc
      961 aacgatgcga cgctgctcag tctggaagat ctgtcgatgg gctcagccaa cgagcgcgaa
     1021 ggcagccgtc gtgaaagtat ccagaatctc gatttcgatc cgctgacatt ggtcgaaagc
     1081 aaggatctca tcgacaagct cggcagcgcc gtcaagggtt tgccggaacg cgaacggctg
     1141 gtgatcacgc tgtattatta cgaagaactg acgcttaagg aaatcggcga gatcttgaat
     1201 ctgagcgagg gacgtatctg tcaaattttc gctcaaacgg tgggacgctt gcgcgcggcc
     1261 ctgggtatcg ccgtgaaacc caaaccaggc ggcaagcgcg gcgccgagac acgcaaagcg
     1321 ccgagtgcgg tgaaaccggt tcgcgtttaa ggatgggctg gcgaaccgcg aacaatggct
     1381 taggaagtcg caactttttt tgctggcggc catggcagat tcgatcaatc ggatcgttcc
     1441 cccttcggtg tccgtcgatc gtggacggca ggttggcagg gaacgcccga aagaaaagtc
     1501 gggcgcggag agacgcaagc ctcatcatgg cggcgccgat gcgcctgaga atcacagtga
     1561 agagccaggc gcggagccag acgacgcaac aaaggataaa ggtaagcatc tcgacattag
     1621 tgtttgagtg cgaaacgccc atgaagcagt caagaagaag gagaaccgta tggaaataat
     1681 cattttcgaa ctttcagcgg ggttgttact ggcggcgatc gtcttgttgt ccaggcgcca
     1741 gcgcgccgcg gcgcaaaagc gcggcgctgt ggagctccag cgaggggagg aaccggcgcg
     1801 gcttgcggct caggcgcagc aggcatgctt gaatggcttg gagaagctgc acgatagttt
     1861 atcttcgttg gaccagcgca cgacggcggt cgagcgcaac ctcgatagtc tcatggcagc
     1921 gccgctgccg gagcgccggc aacactacga ggcggcggcg ctgctgctcg ccgctggact
     1981 tgacggcgac cggatcgccg gcgtgctcgg ctttccgctt gcccaagtgg agatgattgg
     2041 cgacctcaga agaatcctcg gtaccggcgt aaagacgaat cccgaggtcg agccgccgca
     2101 gcccgtaaga acggcaaaaa gaaaagccct gacgcgctcg gccaaagcga gaccccagcc
     2161 ggtactgctc accgacatcg ttgaggcggc gcacgcgctt aacggcgcgg cgtaatcacg
     2221 caggcatcct atggcaacaa caactctcag gcgcgcttcg gccagtcggc cggggtgctc
     2281 aaacttgaaa ggagtccaat catgacggac atgatgatat ttgtcagcgc ggttctcagt
     2341 ttgggtctgg tggctttatg cgccctcaaa tggcgccggc gcaaagccgg tgtcgagatg
     2401 aaaaacgaca gtgtcgcgca actggaagac gtgctgcgcg cggccgagct gagcaacgcg
     2461 agtttttttc aatccctcca gctggtgcaa aaaaatctcg aatccttgct tacccgcgcc
     2521 gagagcgccg agcaaagact gcgcgcgctg atgttgcagc cgggggggga gaaaaaggag
     2581 caatacgccg ccgccgcgtt gctgcttggc gatggccagg aaccgcagcg ggtcgcgtcg
     2641 atgctcaatc tgcccttgcc gcaggtccag ctcgtccgtg agctgcaacg gatgacgatc
     2701 aaagagcgaa gcccggcggc gcgcaaaggc ggcgaggagc caagtccaaa gcgggagagc
     2761 cagccccaga caaaaattgc cgcccccagg gaaaaaactg ccgccgatcc gatgcgcttg
     2821 gtcgatgtca ttcgcaaggc gacgagcgag gcggcgaaac gggaaaacga gttacaccat
     2881 tttaacggca tcaatgccta gaaaccgcag tttgccgcgt cagggtacgc ggattgcttt
     2941 gaggtaactg acatggaagc agcgatgtat aaagctctct ccggcgcggt ggtggaaatg
     3001 cgccggctcg aaaccgcgtc gcaggattta gccaacatca acacggcggg ctacaaggga
     3061 cagcgtttgg cttttagcga ggtgctggct aagcgggtgg cgccggagga ccggcccggc
     3121 ggcttcgtcg cggtcgccgg ccaacgcacc aatctgcacc agggcgccat cgaaggcagc
     3181 ggcaacccct ttaatctggc cctcgaaggg gacggttatt ttggtattca atcgccgcgc
     3241 ggggttcgaa tcgcaaagta gccatcacct tcgagggcaa gatgaaaggg gttgccgctg
     3301 ccttcaatgg cgccctggtg cagattggtg cgctggccgg cgaccgcgac gaagccgccg
     3361 ggccgg
//
LOCUS       DATIRS010000180         4306 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1685200, whole genome shotgun sequence.
ACCESSION   DATIRS010000180 DATIRS010000000
VERSION     DATIRS010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4306
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1685200"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..373)
                     /locus_tag="VLM90_02280"
     CDS             complement(<1..373)
                     /locus_tag="VLM90_02280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11808.1"
                     /translation="MVTRDRSLWRRYLLASLLYGSIGLGLQQIGEVQAANLAALDGNR
                     PPSFASIAKKTMPVVVNISTLTQRSPRSGSNDPIEDFFNRFFGESAPRENNSRSLGSG
                     ILISRDGEILTSYHVVRSADTI"
     gene            521..1873
                     /gene="mgtE"
                     /locus_tag="VLM90_02285"
     CDS             521..1873
                     /gene="mgtE"
                     /locus_tag="VLM90_02285"
                     /inference="COORDINATES: protein motif:HMM:TIGR00400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HSQ11809.1"
                     /translation="MKPAPIDYDTVREMLRTATPDRVLRFIGKSHPADIALLFKGLDS
                     SEVRQLFDVLFSSRRAAKTLKELPFELLPDILALIDDEKVGRLIVRADPDEAVIFIDS
                     LPDERRERVMALLDPERRAAVREIINYPEGTVGRLMTTDFMALPPDATAQGAIDKIRE
                     RGELESFFYLYVIDNDGKLVGVVPIRNLVIAPPARKLRDMMIADPIKADVFMDQEDAA
                     RIVAKYELLALPIVDEGGRLEGIITVDDVIDIIKEESTEDLYKMVGLAEEDRVFTPVS
                     RSVKMRLPWTILNLLTATLAASIVGLFEGTLHEIIALVTFMPVIAGVGGNGATQTATV
                     IIRAIALGELEFSSAWKAVINQVSVNICIAIAAGAMIALAAILWKGNPYLGLVLAGAM
                     LLNLGLMAGFAGAVIPLLLKGMKLDPALGSGIIVTGLTDAFGFLSFLGLATIFRSYLI
                     "
     gene            complement(1805..2845)
                     /locus_tag="VLM90_02290"
     CDS             complement(1805..2845)
                     /locus_tag="VLM90_02290"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HSQ11810.1"
                     /translation="MKKAKPIIILLVKLLVSGGLLAYFLSRVHPERFLHTFATANYWW
                     IALALVIYLGTQAISAARWATLARPLGIETRFTNLLKYYLIGMFFNLFAPGTVGGDVS
                     RVVYLARDQESHAKGRAVTTTHAAMSVLMDRAIGMIVLVWLGAAGLLLFPEYAVPPTV
                     RSITLMLAAGFVGAVLLLPLFRRVLPEDGHPMVVKIRLALHSYRTQWRALAAAAALSL
                     VAHSIQAWMHLVMGRALGLEVPLAFCLIVYPLVGTFAAIPVSLNGLGLREGGYIYLLA
                     VIGISSENGMAFGLLLFLIVALDSLLGGVLFLLQKSPKAAGAIADEDDLDQITAEDRR
                     QSEKREKAKGIG"
     gene            complement(2842..3504)
                     /gene="purN"
                     /locus_tag="VLM90_02295"
     CDS             complement(2842..3504)
                     /gene="purN"
                     /locus_tag="VLM90_02295"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HSQ11811.1"
                     /translation="MARQVPIAVLLSGGGTNLQAIIDAIEAKKLDAKIELVLSNKADA
                     FGLVRAQNHGIPTEVLDHLTYPSRETYDQAVVDRLRGRGVELVALAGFMRLLSPVLIK
                     AYSNRIMNIHPALLPSFPGLHVQKKAVDHGVRFAGCTVHFVNEECDEGPIIIQAVVPV
                     FADDTEESLAARILKQEHQIYPRAIQLYAAGRLHVSGRRVLVDGLTKDELQVLVQPPL
                     ER"
     gene            complement(3511..>4306)
                     /gene="purM"
                     /locus_tag="VLM90_02300"
     CDS             complement(3511..>4306)
                     /gene="purM"
                     /locus_tag="VLM90_02300"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HSQ11812.1"
                     /translation="IGIDLVAMGVNDILTQGATPLFFLDYFVCGRLDVKITEAVVRGI
                     AAGCRQAGCALIGGETAEHPGDFPNGEYDLAGFVVGALEKNKIIDAAAVTPGDVLIGI
                     PASGLHSNGYSLARKVLLERGGLKLSRRIPELGRTLGEELLEPTRIYAKITKKLFGAF
                     RIKGAAHITGGGISGNLPRVLPQGRHAVVERTSWSVPPIFGLIQKIGGVAQPEMEATF
                     NMGLGMILIVDKKDADPVIRKLQRIGEPSFVVGEIRQGAQGATIRS"
BASE COUNT          975 a         1321 c         1189 g          821 t
ORIGIN      
        1 tgatcgtgtc ggcgctgcgc acaacatgat aactggtgag gatctcaccg tcccggctga
       61 tcaaaatccc cgagcccaaa ctgcgcgaat tgttctcacg cggcgccgac tcgccgaaaa
      121 accgattgaa gaaatcttcg atgggatcgt tggagcccga acgcggcgag cgttgtgtca
      181 gggttgaaat gttgaccacc accggcatgg tttttttggc gatgctggcg aaggacggcg
      241 ggcgattgcc gtccagagca gccagattgg cggcctgtac ttcgccaatc tgctgaagtc
      301 cgagcccgat cgagccatac agcagactgg cgagcaaata ccggcgccac agcgatcgat
      361 cccgtgtaac catcagcgat aaatcctcga tagatccgac cctgccagca caatagcaaa
      421 tttcctgcgc gcggtgaaac cggcgggcga aaggccaaaa catttgcaaa taaccatctc
      481 agtgtctatg aagtaaccag ccctagcgtc gaaagcaacc atgaaacccg ctcccatcga
      541 ttacgacacc gtgcgcgaaa tgctgcgcac tgcgacgccg gaccgcgtgc tgcgttttat
      601 cggcaaaagc caccccgccg acatcgcctt gctattcaaa gggctcgatt catcggaagt
      661 gcgccaacta ttcgacgtgc tgttctcgtc gcgccgcgcc gccaagacgc ttaaagagct
      721 gcctttcgaa ctattgcccg acatcctcgc cttgatcgac gatgagaaag tcggccggct
      781 gatcgtgcgc gccgacccag atgaggcggt catcttcatc gacagccttc ccgacgagcg
      841 ccgcgagcgg gtcatggcgc tgctcgaccc ggagcgccga gccgcggtac gcgaaataat
      901 caactaccca gagggcaccg tgggccgttt gatgaccacc gacttcatgg cgctgccgcc
      961 ggatgccacc gcccaaggcg ccatcgataa gatccgcgag cgcggcgaac tcgagagctt
     1021 tttctatctc tatgtcatcg acaacgacgg caagctggtc ggcgtcgtgc ccatccgcaa
     1081 cctcgtgata gcgccgccag cacgcaaatt gcgcgacatg atgatcgccg atccgatcaa
     1141 agccgatgtc ttcatggatc aagaggatgc cgcgcgcatc gtcgccaagt acgagctctt
     1201 ggcgctgccg atagtcgacg aaggcggccg cttggaaggc atcatcaccg tcgacgatgt
     1261 catcgacatc atcaaagaag aaagcaccga ggacctgtac aagatggtcg gcttggccga
     1321 ggaagaccgg gtcttcacgc cggtgtcacg ctcggtgaaa atgcgcctgc cctggaccat
     1381 cctcaatttg ctgacggcaa cgctcgccgc atccatcgtc ggcctcttcg aaggcacgct
     1441 tcatgagatc atcgccctgg ttacgttcat gccggtgatt gccggtgtcg gcggcaacgg
     1501 cgccacccag accgcgacgg tgatcattcg cgccatcgcc ctgggcgagc tggagttttc
     1561 ctcggcctgg aaggcggtga tcaatcaagt gtcggtcaat atctgcatcg ccatcgccgc
     1621 cggcgccatg atcgccctgg cggcgatttt gtggaagggc aatccttatc tgggactggt
     1681 gctcgccggc gcgatgttat tgaatctcgg actgatggcg ggctttgccg gcgcggtcat
     1741 ccccttattg ctcaaaggca tgaaactcga cccggccctc ggttccggca tcatcgtgac
     1801 tggcctaacc gatgcctttg gctttctctc gtttctcgga ctggcgacga tcttccgcag
     1861 ttatttgatc tagatcgtct tcatcggcaa tcgcgccggc cgctttaggc gacttttgca
     1921 ataagaacag gacgccgccg agtaaactat caagggcaac gatcaagaac agcaacagac
     1981 cgaaggccat gccattttca ctgctaatgc caatcacggc gagcaaataa atgtaccctc
     2041 cttcgcgtag ccccaaccca tttaaactca ccgggatcgc cgcaaaggtt cccaccaacg
     2101 gatagacgat gagacaaaac gcaagcggca cctctaaacc gagcgcgcgg cccatcacaa
     2161 gatgcatcca cgcttggatt gaatgagcga ccagggagag cgcagccgcg gccgccaacg
     2221 cgcgccactg ggttcgataa ctgtgcaggg ctaagcggat tttgaccacc atcggatggc
     2281 cgtcctcggg taacacacgc ctgaacaacg gcagaagcaa aaccgcgccg acaaaacccg
     2341 ccgcgagcat aagcgtgatc gaacgaaccg tcggcggaac cgcgtactcg ggaaacaaca
     2401 gcaaccccgc ggcgcctaac cagaccaaca cgatcatacc gatggcgcga tccatcagca
     2461 ccgacatggc ggcgtgcgtc gtcgtcacag cgcgcccctt ggcgtgagat tcttgatcgc
     2521 gcgcgaggta aacaacccgg ctgacatcgc cgcccaccgt gccaggcgcg aacagattga
     2581 agaacatgcc gatcaagtaa tatttgagta aatttgtgaa ccgcgtctca attcccaacg
     2641 gccgcgcgag ggtggcccag cgcgcggcac taatcgcttg ggtacccaga tagatgacca
     2701 gcgccagcgc gatccaccaa taattcgccg tcgcaaaggt atgcagaaag cgctcgggat
     2761 gaactcgcga aagaaaataa gctagcagac cgccgctgac gagcagcttc actaacaaga
     2821 taataatcgg cttggccttt ttcatcgttc caacggcggt tgcacgagga cctgaagctc
     2881 atccttggtc agaccatcca cgagcacccg gcgcccgctg acatgcaggc ggcctgcagc
     2941 gtaaagctga atcgcgcggg gatagatttg atgctcttgt ttgagaatcc gcgccgccag
     3001 tgattcttcc gtatcgtcgg caaaaaccgg cacgaccgct tggatgatga tcggcccctc
     3061 gtcgcactct tcgttgacga aatgcaccgt gcagccggca aagcgcacgc catggtcgac
     3121 ggccttcttc tgcacatgaa gacctgggaa tgacgggagc aaggccgggt gaatgttcat
     3181 gatgcgattg gagtaggcct tgattaaaac cggcgagagc aaacgcatga agccggcgag
     3241 cgccaccaac tcgacgccgc gcccgcgcaa ccgatcgact accgcttgat cgtaggtttc
     3301 acggcttgga tacgtcaggt ggtccaagac ttcggtgggg atgccgtgat tttgcgcccg
     3361 caccagaccg aaagcgtcgg ctttgttgct caaaaccaat tcgatcttag catcgagttt
     3421 tttagcctca atggcgtcga taatcgcctg cagattggta ccgccgccgg aaagcaaaac
     3481 tgcgatggga acttgtcttg ccatattatt ttaagaacga atcgttgcgc cctgcgcgcc
     3541 ttggcgaatc tcaccgacga caaaactggg ctcgccaatg cgttgcagct ttcgaataac
     3601 cgggtcggcg tctttcttgt cgacgatgag aatcatgccc aggcccatat tgaacgtcgc
     3661 ttccatctcc ggctgggcga ccccgccgat tttctgaatc aagccgaaga tcggcggcac
     3721 cgaccaactt gtccgctcaa ccaccgcatg ccgtccttgc ggcaataccc gcggcagatt
     3781 gccgctaata ccgccgccgg tgatatgcgc cgcgcctttg atgcgaaacg cgccgaacag
     3841 ctttttggtg attttagcat aaatgcgcgt cggttcgagc agctcttcgc cgagggtgcg
     3901 accgagctcg ggaatacgcc ggcttaattt caagccgccc cgttcgagca gaaccttgcg
     3961 cgctagcgaa taaccattgc tgtgcagtcc gctggcaggg atgccgatca agacatcgcc
     4021 aggcgtaacc gccgccgcat cgataatttt atttttctcc aaagcgccga cgacaaagcc
     4081 ggcgaggtcg tactcgccat taggaaaatc accggggtgc tcggcggtct cgccgccgat
     4141 cagcgcacag ccggcctggc ggcagccggc ggcgatgccg cgtaccaccg cttcggtgat
     4201 tttcacgtcg agcctgccgc agacgaaata gtccagaaaa aacagcggcg tcgcgccctg
     4261 agtcaagata tcgttgacgc ccatggcgac caaatcaata ccgata
//
LOCUS       DATIRS010000181         1825 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_898591, whole genome shotgun sequence.
ACCESSION   DATIRS010000181 DATIRS010000000
VERSION     DATIRS010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1825
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_898591"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1602)
                     /locus_tag="VLM90_02305"
     CDS             complement(<1..1602)
                     /locus_tag="VLM90_02305"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSQ11813.1"
                     /translation="MTQVVGKSTPRVEGEIKVTGKAMYSADLKLPDTLWGKCLRSPIS
                     YGRIKRIDTSKAVRVPGVKAVITGQDVPGLRIGRCIYDTPVLADGVVRFIGEKVAAVA
                     AETRLAAEEAVESIDVEYEELDPLLDPVQALEDSAPVLHPDLLSYKGLPVPVEKLGNL
                     FAYLKWGKGNLEEGFKQADLIVENTFTTQVTHQSYLEPHACVAKVNPATGEADIWSCS
                     KTPFAVRTQLSNCIGLAKEKLVFHPMHIGGDFGGKGGFMDVPVAYFLSKKSGQAVKMI
                     MDYTEELTAGNPRHASIIKVRTGVKKNGLITAHHMEFLFDSGAYGSMKPAGYLIGAST
                     CAGPYKIANCLIEERMVYTNKIPCGHMRAPGDPQGFFANESQMDIVARQLRMDPAAFK
                     RKNMMQDGDESPIGGHVSHIRGNEALDKAIQLSGYGKPKPKNVGRGLAFSEWSPSGGE
                     GNVFVTIDEDGRVKVISPVVDQGAGVLTVIVEVVGQELQVPADEIELKQVDSTVVPSD
                     GGVGGSRATRVYGNASYEAGVKAREE"
BASE COUNT          337 a          604 c          484 g          400 t
ORIGIN      
        1 ttcctcgcgc gccttcactc ccgcctcgta ggaagcgttg ccgtaaacgc gcgtggcgcg
       61 actgccgccg acgccgccgt cgctcggcac gaccgtgcta tcgacctgct tgagctcgat
      121 ctcgtccgcc ggcacctgca attcttggcc gaccacctcg acgatcaccg tgaggacacc
      181 cgcgccctga tcgaccaccg gcgatatcac cttcacccgt ccgtcttcgt cgattgtcac
      241 gaagacattg ccctcgccgc cgcttggact ccattcggaa aacgccaaac cgcgcccgac
      301 gtttttcggt ttcggcttgc catagccgga aagctgtatg gccttgtcca gcgcttcgtt
      361 gccgcggatg tgcgagacgt ggccgccgat cggcgattca tcgccgtctt gcatcatatt
      421 cttgcgcttg aatgccgccg ggtccatgcg cagctggcgc gccacgatat ccatttggct
      481 ttcgttggcg aagaaccctt gcggatcgcc cggcgcgcgc atgtgcccgc acgggatctt
      541 gttggtgtag accatccgct cctcgatcag gcagttggcg atcttgtacg gcccggcgca
      601 ggtcgatgcg ccgatcagat agcccgccgg cttcatcgag ccgtacgctc cgctgtcgaa
      661 gagaaactcc atgtggtgcg ccgtgatcaa tccgttcttc ttgacgccgg tgcgaacttt
      721 gatgatggag gcatggcgcg gattgcccgc tgtcaactct tcggtgtagt ccatgatcat
      781 tttcaccgcc tgcccgctct tcttcgacag gaagtacgcg accggcacgt ccataaatcc
      841 gcccttgccg ccaaagtcgc cgccgatgtg catgggatga aagacgagtt tctctttcgc
      901 caggccgatg cagttcgaca attgggtgcg caccgcgaac ggggtcttgc tgcaagacca
      961 gatatccgcc tcgccggtgg ccgggttcac tttcgccacg cacgcatggg gctccagata
     1021 agattggtgc gttacctggg tcgtgaaggt attttcgacg atcagatcgg cttgcttgaa
     1081 accctcttcg agattgccct tgccccactt aagataagca aacaggttac cgagtttctc
     1141 caccggaacg ggaagaccct tgtaagaaag cagatcggga tgaagcacgg gcgcgctgtc
     1201 ttcgagcgct tgcaccggat cgagcagcgg gtccaattct tcgtattcga cgtcgatcga
     1261 ttccaccgcc tcttccgccg ccaacctggt ctccgccgcc acggcggcga ctttctcgcc
     1321 gataaatcgc actacgccat ccgccagcac cggcgtgtcg taaatgcacc ggccgatcct
     1381 cagccccggc acatcctggc cggtgatcac cgccttcacc cccggcaccc gcacggcctt
     1441 gctcgtgtcg atccgtttga tgcggccgta agaaatcgga ctgcgcaaac atttccccca
     1501 cagcgtatcc ggcagtttca aatccgcgct gtacattgct ttccccgtca ccttgatctc
     1561 gccctcgact cggggcgtcg acttgccaac aacctgcgtc atctaattcc tcccaactga
     1621 taaatcttat gcgacctagc cgcgttgtat gtccattttt aaaccggaac cagtcaaatt
     1681 gtccagcgat gcgaaaacgc tctaaggact tagcgccgac aagctgtgac caaatgagat
     1741 ctagccttca tcatgcagcc ccctcctcac atcctccccc gcgatgcggg ggaggacaga
     1801 ggtgggggat tgaacgattt gaacc
//
LOCUS       DATIRS010000182         2566 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1685481, whole genome shotgun sequence.
ACCESSION   DATIRS010000182 DATIRS010000000
VERSION     DATIRS010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2566
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1685481"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..456
                     /locus_tag="VLM90_02310"
     CDS             <1..456
                     /locus_tag="VLM90_02310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11814.1"
                     /translation="GSAVAVLSVLLTTNFANAELLCVQLISDNTVKRSVPVQLGGAMR
                     LSFSHSIYGSQVEEVFSLRRDGFQLTQLRYSEARLVDFYGYENAELENGAWVVNPPPV
                     LLPALNLKISADAAMALYLDRRYDSKPLTIRPTGALRLTVASCKSSAHG"
     gene            449..2395
                     /locus_tag="VLM90_02315"
     CDS             449..2395
                     /locus_tag="VLM90_02315"
                     /inference="COORDINATES: protein motif:HMM:TIGR02123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter fused permease subunit"
                     /protein_id="HSQ11815.1"
                     /translation="MAEGSIDPSHLEAAQRFIEQEAGPRRRLTGAIGKITSALAVGMS
                     LIFLYWAWASVTAQVLRLVFLGLALTLSFLIYPTHRSGNSTWIPWHDWLMALASIAVV
                     AYPLWDFEEFIYRAALPTQMDQIFGALTMLLVLEATRRTTGWVLPVVAIGFLAYASFG
                     AYLPPPWTHQGYQLDRLVGHMYITLEGIFGVPLDVAATFIILFTIYGAVLEFSKAGEF
                     YVNFSLAATGGKPAAAGRTVTLASFLLGGPSGSGVATTVTLGSVAWPLLAKAGYDKDS
                     AGGLLSAGGIGAIISPPVLGAAAFLIAEFLKISYLDVLAMAAIPTLLYYWSIFTMVEL
                     DARKFGAIPIAVEGDSMWSLTRKYGFHFLSLIAIVGFMMWGYTAILSVAFAIVLGIAL
                     SYIRRDTALTPTKIWRLLEKGTVDVLSVASTCATAGIIVGVVTLTGLGLKFSLIILTL
                     AGNNLFLTVLYTALSLWLLGLAVPVTASYIIAAVITAPAMIKLGIPEYAAHMFIFYYA
                     VLSEVSPPTALSPFAAAAITGGSPYKTTMMAWKYTAPAFLVPFMFTLHPDGIGLLLKG
                     EWSNILWTTATAAAGLAALAAGLTGWLLVKTTIAERALLIAAGLVLVYPSLIQDVIGI
                     GLFGMAGILQYRRRRAPAVREAIK"
BASE COUNT          445 a          836 c          705 g          580 t
ORIGIN      
        1 ggtagcgccg ttgccgtgct cagcgtattg ctcacaacaa acttcgccaa cgcggaatta
       61 ctctgcgttc agttgataag tgataacacc gtcaaacgca gcgtgccggt tcagctcggc
      121 ggcgccatgc gcctcagttt cagccactcg atctacggca gccaagttga agaagttttt
      181 tcgctgcggc gcgacggttt tcaattgacc caactacgtt acagcgaagc gcgcttggtg
      241 gatttctacg gctatgagaa tgccgaactt gaaaacggcg cgtgggtagt caacccgccg
      301 ccggtgctgc tgcccgcgct caacctaaag atcagcgccg acgccgccat ggctctttat
      361 ctcgatcgtc gttacgactc caaaccgctt acgatccgac cgaccggcgc gctgcgattg
      421 accgtcgcat cctgcaaaag cagcgcccat ggctgaaggt tccatcgacc catctcacct
      481 cgaggcggcg cagcgattca tcgagcaaga ggcgggaccg cggcgccgtt tgaccggcgc
      541 catcggcaaa atcacttcgg cgctcgccgt cggcatgtcg ctgatatttc tctactgggc
      601 gtgggcgagc gtcaccgcgc aagtgttgcg gctggttttc ctcggcctcg cactgacgct
      661 ttctttcctg atctatccga cccatcgcag cggcaatagt acctggattc cctggcatga
      721 ctggctcatg gcgctcgcca gcatcgccgt ggtcgcttac ccgctgtggg atttcgaaga
      781 gtttatttac cgcgccgccc tgccgaccca gatggatcag atttttggcg ccctcaccat
      841 gctcttggtt ttggaagcga cccggcgcac caccggctgg gtactgcctg tggtcgccat
      901 cggttttctc gcctatgcca gtttcggcgc ctatttacca ccgccatgga cccatcaagg
      961 ttaccagctt gaccgcctgg tcggtcatat gtacatcacc ctcgaaggca tcttcggcgt
     1021 gcccctcgac gtcgccgcga cgtttattat tctcttcacg atctatggcg cggtgttgga
     1081 attttccaaa gccggtgagt tctatgtcaa tttttcccta gccgctaccg gcggcaaacc
     1141 cgccgccgcc gggcgcacgg tcacgctcgc atcattctta ctcggtggac cctccggttc
     1201 cggcgtggcg accaccgtga cgctgggttc cgttgcctgg ccgctgctcg ccaaagccgg
     1261 ctacgacaag gactcggccg gcgggctcct gtccgccggc ggcattggcg cgatcatctc
     1321 gccgccggta ttgggcgccg cggccttcct catcgccgag tttctcaaga tatcctacct
     1381 cgacgtgctc gccatggcgg cgattccaac gctgctctat tactggtcga tcttcaccat
     1441 ggtcgaactc gacgcgagaa aattcggcgc cataccgatc gccgtcgagg gcgatagcat
     1501 gtggagtctg acgcgcaaat acggctttca ctttttgtcg ttgatcgcca tcgtcggctt
     1561 catgatgtgg ggctataccg cgattctttc ggtggccttt gccatcgtcc tcggcatcgc
     1621 gttgagctac attcggcgcg acaccgccct cacgccgaca aaaatctggc gtttgttgga
     1681 aaagggcacc gtcgatgtct tgtcggtggc ctccacttgc gccaccgccg gcatcatcgt
     1741 cggcgtcgtc acgcttaccg gcctcggcct aaagttttcc ctgatcatcc tcaccctcgc
     1801 cggcaacaat ctgttcctca ccgtcctcta taccgcattg tcattgtggc tcttgggcct
     1861 cgccgtgccg gtgacggcgt cgtatatcat cgccgccgtg attaccgcgc cggcaatgat
     1921 caagttgggc atccccgagt acgccgcgca tatgtttatt ttttattatg ccgtgctctc
     1981 ggaagtctcg ccgcccacgg cgctgtcgcc ctttgccgcc gcggcgatca ccggcggcag
     2041 cccatacaag acgaccatga tggcgtggaa atacaccgcg ccggcgttcc tcgtgccgtt
     2101 catgttcacg cttcatcccg acggcatcgg cttactgttg aagggcgaat ggagcaatat
     2161 cctgtggacc accgccaccg cggcggccgg cctcgccgcc ctcgccgccg gcctgaccgg
     2221 ctggttgctg gtcaaaacca caatagccga acgggccctc ctgatcgccg ccgggctggt
     2281 gctggtctat ccgagcctca tacaagatgt aatcggcatc ggcctatttg gcatggctgg
     2341 gattttacag taccggcggc gcagagcccc ggcagtgaga gaagctatta aataggtttt
     2401 tacgatcttc gtccgatcag cagaccgtga acgaagagct ggaggcgctc acgctccttt
     2461 tcgtcgcagc gaagaaactc gacacgggcg acttgattgt gccaatggcg cagcaccgcg
     2521 agctcgacaa tcaccggcgc ggcctcctcg gacaccttga gttcca
//
LOCUS       DATIRS010000183         1689 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_604109, whole genome shotgun sequence.
ACCESSION   DATIRS010000183 DATIRS010000000
VERSION     DATIRS010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_604109"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(110..778)
                     /locus_tag="VLM90_02320"
     CDS             complement(110..778)
                     /locus_tag="VLM90_02320"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ11816.1"
                     /translation="MTTNQFISVDEHVQEYPEVWTKRLSRAKWGERMPHLAKNSNGKE
                     RWLIDGREIGLDGVADCGAVMPQRTESPQRWADVPAAVHNPKERLKAMDAAGIDYAVL
                     YPNVAGIGGQNFGRIEDGELELACVQAYNDWLLEEWAGVSPRFVPQCIVPLAPIESTV
                     AEIRRCVANGHRGVIYPSIPMELRELPHINDAVYDPVWAACQELSVPICFHAGASAKI
                     QIPA"
     gene            complement(897..1658)
                     /locus_tag="VLM90_02325"
                     /pseudo
     CDS             complement(897..1658)
                     /locus_tag="VLM90_02325"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
BASE COUNT          358 a          549 c          446 g          336 t
ORIGIN      
        1 gaaagcgcat taaaatcttt gagatcaaaa gattaaccaa aaccgatacc gaactcgccg
       61 gccgggtgat cgcctcaatc gccgccgcgg tcgccggcgc gtaaccttcc tacgcgggaa
      121 tttgaatctt cgccgacgcg ccggcatgaa aacagatcgg cacactgagc tcctggcacg
      181 ccgcccatac cggatcgtag accgcatcgt tgatatgcgg caattcgcgc aactccatgg
      241 gaatcgatgg atagatcacg ccgcggtggc cgttagcgac acagcggcgg atttccgcaa
      301 ccgtcgactc gatcggcgcc agcggcacga tgcactgcgg cacgaagcgc ggactgacgc
      361 ccgcccactc ttcgagcagc cagtcattgt aggcttgcac gcaagcgagc tccaactcgc
      421 cgtcttcgat gcggccgaaa ttttgcccgc caatcccggc cacgtttgga tagagcaccg
      481 catagtcgat gcccgccgca tccatcgctt tcaatcgctc cttgggattg tgaaccgccg
      541 ccggcacgtc ggcccaacgc tgcgggcttt ccgttcgctg tggcatcacc gcgccgcaat
      601 cggcgacgcc atccaaccca atctcgcgcc cgtcgatcaa ccaacgctcc ttgccgttag
      661 aattttttgc cagatgcggc atgcgctcgc cccacttggc gcgagataag cgcttggtcc
      721 acacctcggg atattcctgg acatgttcgt cgacactgat gaattggttc gttgtcataa
      781 attatgttga tgagtttcaa aaacagttcg caaataaccc gcggtcgtcc cggcgaaggc
      841 cgggacccag atttcctgga tgccggtttt caccggcatg acggaaagga attaggctac
      901 gccaccccat acagccgcag cgcattgccg taacacattt tcttgcgctc atcttccggc
      961 acacccatca gcgactcctc gacaaaactc cacgaccgcg gataagtcgc ggcgatatgc
     1021 ggatagtccg actcccacat gatattgtcg acgccgaccc actcgcgcta ttcgataccg
     1081 gccttctcgt accagaagtc gacgtagatt tgccggcgaa acacttcgct cggtcgggtc
     1141 ttgaggcctt ccttccacag ctggcgggtc tcccactcgt gatcgctggc ttcgagcaca
     1201 taactgaccc aaccgaagcc ggtctcagcg caggcccaat tgagctgggg atggcgatcg
     1261 agaatgccgg aaaatattaa attggggatc agctgcgccg gcgtcgcgca caagcgcgaa
     1321 gtcgagacgg tatgaaattc cttttttgta aaaccgctcc acttgggcaa cgacagctgt
     1381 tcgaccagcc ccgatgaacc atgccagtgc atcggcacgc ccaggtcggc gcagcaagcc
     1441 cagagcggct cccaaaacgg atcgttcatg cgcttgagcc ctttctttgt aaacgccggc
     1501 tcagccaaca tgaccacgcc gcggtggcct cgtttgaccg agcgctcgac ttcggcgacg
     1561 accacgtcga tctcgctcat gtatggaatg atcgccaccg gcacatagcg ctcgctgact
     1621 tcgcgccatt ccgccagggc atcgttatgc gcctgcacgc aggcgagctc gaattctgca
     1681 tcggcctga
//
LOCUS       DATIRS010000184         1546 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1095717, whole genome shotgun sequence.
ACCESSION   DATIRS010000184 DATIRS010000000
VERSION     DATIRS010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1546
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1095717"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1262)
                     /locus_tag="VLM90_02330"
     CDS             complement(<1..1262)
                     /locus_tag="VLM90_02330"
                     /inference="COORDINATES: protein motif:HMM:NF025774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MEDS domain-containing protein"
                     /protein_id="HSQ11817.1"
                     /translation="MSDISPSSHVAYFWNDEKEFADGVKFLESGLSSSDHCVIFGHDE
                     ANQMVCDVLKGRGYDVDSLLASGRITILGGATEASEILAKIGAVFEKSLAGGASLIRL
                     LGNIGWGRADWPDEKSLLAFEAQVTEVAKQFPCVVVCMYDVAGLPGSIVHHGGIGTHP
                     HIVCNGHAQANPNHVPAEIFLRRLETVAGSVAERRRSEATLHHISEATVQHVGEDFFR
                     ELARHLAEALGVRYCFITECTDDAQTRLRALAFWGGDGFAHNVEYPLRGTPCEKVIEG
                     SICSYPERLQLLFPEDKDLVTLGAESYAGVPLPNATGRVLGHLVVMDIRPREFGPAEL
                     RILRIFATRAGIELERSRADAALKANQRRLNMILDINNAIVSKLTRDELFAAIADSLA
                     RTMRFDRLALSLYDPELKALRIVTHAGA"
BASE COUNT          336 a          451 c          440 g          319 t
ORIGIN      
        1 taggcgccgg cgtgggtgac gatccgcaag gctttgagct ccgggtcgta aagcgaaagc
       61 gccagacggt caaaccgcat cgttcgcgcc agtgagtcag cgatcgcggc gaatagttca
      121 tcccgggtca gtttgctgac gatggcgttg ttgatatcga ggatcatatt tagcctgcgc
      181 tgattcgcct tcaaggcggc gtccgcgcgg ctccgttcca attcgatgcc ggcgcgggtg
      241 gcgaagatcc gcagtatgcg caattctgcc gggccaaact cgcgcgggcg aatgtccatc
      301 acgaccagat ggccgagcac gcggccggtg gcattgggca gcggcacgcc ggcgtagctt
      361 tcggcgccaa gggtgaccag atccttgtcc tcgggaaaca gtaactgcag ccgctcgggg
      421 taggagcaaa tactgccttc gatgactttt tcacagggcg tgccgcgcag cggatactcg
      481 acgttatgcg caaacccatc gccgccccaa aatgccaggg cgcgcaaccg ggtctgggca
      541 tcgtcggtgc attcagtgat gaagcagtag cgcacaccca acgcctcggc gaggtggcgc
      601 gccagttcgc gaaaaaaatc ctcgccgaca tgctgcaccg tggcttcgct aatatggtgc
      661 agcgttgctt cgctgcgccg gcgctcggcc accgagccgg caacggtctc caagcggcgc
      721 aaaaatatct cggctggcac gtggtttggg ttggcttgcg cgtggccatt gcagacgatg
      781 tgcgggtgag tgccgatccc gccatggtgg acgatcgatc ctggcaatcc ggcgacgtcg
      841 tacatgcaga ccacgacgca aggaaactgt ttcgccactt cggtcacttg tgcttcaaaa
      901 gccagcagcg atttttcgtc cggccagtcg gctctgcccc aaccgatgtt gcctaaaagc
      961 cgaatcagcg atgctccgcc agccaatgat ttttcaaaca ccgcgccgat cttggcgaga
     1021 atctccgacg cttccgtggc gccgccgagg atagtgatgc gcccggatgc caacaaacta
     1081 tcgacgtcat agccgcgtcc cttaagcacg tcgcaaacca tttgattggc ttcatcgtgg
     1141 ccgaaaatca cacagtgatc actgctcgag agtccggact cgagaaactt cacgccatcg
     1201 gcaaactcct tttcatcgtt ccaaaagtaa gcgacatggc tggacggaga aatatcgctc
     1261 atctgggtgc cgaagcagac gcttactgaa ggatgtgcgg gcgtcagtcg aacaccaacg
     1321 ttttccgggt cagacataca ccatgccttt gttgacttgc cgaatgccgt gcggtcgcga
     1381 tcgttaggag catgaaaact ctaccagctg cttgcggcat ttcgcaacca tcgcgaaata
     1441 tcacaacgaa atgccacagc tcctatcgcc tatttttgca aaactttaat ttatttcaat
     1501 acttaagatg tggcatgaca tctgctcaag agcttgggca agcaag
//
LOCUS       DATIRS010000185         2015 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1194060, whole genome shotgun sequence.
ACCESSION   DATIRS010000185 DATIRS010000000
VERSION     DATIRS010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2015
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1194060"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..1338)
                     /gene="ftsZ"
                     /locus_tag="VLM90_02335"
     CDS             complement(106..1338)
                     /gene="ftsZ"
                     /locus_tag="VLM90_02335"
                     /inference="COORDINATES: protein motif:HMM:TIGR00065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HSQ11818.1"
                     /translation="MFEIIEKQNSLTARIKVIGIGGGGGNAVNTMIGAKLTGVDFMVA
                     NTDAQSLQASQAPMRIQLGGLVTKGLGAGANPEIGRREALEDQEQIREYMEGSDMIFI
                     TAGMGGGTGTGGAPVMARIAREVGALTVGVVTKPFIFEGKKRQRQAEQGIEELKQSVD
                     TLIVIPNQRLLSIAAKTTTMIEAFHKADDVLLQAVRGISDLIITPGLINLDFADVRTV
                     MAEMGLALMGAASASGENRAIEAAQKAISSPLLEDISIQGARGVLINITGGPNLCLHE
                     VNEAASMIQEEAHDDANIIFGAVIDETMGDEIRITVIATGFGEEKHGHKTVPVQVQAP
                     AAASIANIASVVPKIKKVVHLGTIIDDLDAPTWQRKKSGSEDLESLTLNKNNFQSSAS
                     QEDDDKYDIPTFLRRQMD"
     gene            complement(1380..>2015)
                     /gene="ftsA"
                     /locus_tag="VLM90_02340"
     CDS             complement(1380..>2015)
                     /gene="ftsA"
                     /locus_tag="VLM90_02340"
                     /inference="COORDINATES: protein motif:HMM:TIGR01174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HSQ11819.1"
                     /translation="ERELGVVLVDMGGGTTDITVFHDGTVKHTAVLSIGGNHVTNDIA
                     AGLRTPFGDAERIKQRYGFAKAAMAMDQERVEVPSIAGKEAGTVSRQILCEIIEPRLD
                     EIFELVQKEIAKSGFDGSLASGIVATGGAMLLPGAVEMAVRSFGLPVRLGVPMQVGGL
                     VDIVDNPIHAAAVGLVLHGMKGQERGVARPRDDKMLAKVKHRMSDWLSEFF"
BASE COUNT          373 a          646 c          557 g          439 t
ORIGIN      
        1 tccccaataa actaccaaca acatgagacg ctccactagc cggccgtctg cagcggggcc
       61 tgcggcaggc cggcacaccg gaggaggatc gatgttgaca gcgggctaat ccatctgtcg
      121 tcttaggaat gtcgggatat cgtacttatc gtcgtcttcc tggctggcgc tcgactggaa
      181 attgtttttg ttgagcgtca gagactcgag atcttcgctg cccgacttct tacgttgcca
      241 ggtcggcgcg tcgagatcgt cgatgatggt accaaggtga accaccttct tgatttttgg
      301 caccacgctg gcgatgttgg cgatactggc cgccgcgggc gcctggactt gcaccggcac
      361 cgttttgtga ccgtgttttt cttcaccgaa tccggtggcg atcacggtga tgcggatctc
      421 gtcgcccatg gtttcatcga tcaccgcgcc aaaaataata ttggcatcgt cgtgggcttc
      481 ttcttgaatc atcgatgccg cttcgttgac ttcgtgcagg cagagattgg gcccgccggt
      541 gatgttgatc aacacgccgc gcgcgccctg gatcgagatg tcttcgagca acggactgga
      601 gatcgctttt tgcgccgctt cgatggcgcg gttctcaccg ctcgccgacg ccgcgcccat
      661 gagcgctaag cccatctccg ccatcaccgt gcgcacatcg gcgaagtcaa gattgatcaa
      721 tcccggggta atgatcaaat ccgagatgcc gcgcaccgct tggagcaaga catcgtcggc
      781 cttgtgaaac gcctcgatca tggtcgtggt cttggccgcg atgctgagca agcgctggtt
      841 cggaatcacg atcaaggtat cgacgctttg tttcaactct tcgatgccct gttccgcctg
      901 gcgctggcgt tttttgccct cgaagatgaa aggcttggtc accacgccga cggtcagcgc
      961 gccgacttca cgcgcgatcc gcgccatcac cggcgcgccg ccggtgccgg tgccgccgcc
     1021 catgccggcg gtaataaaaa tcatgtcgga gccttccata tactccctga tctgttcttg
     1081 atcctccaac gcctcgcgcc ggccgatctc gggattggcg cccgcgccca accccttggt
     1141 caccaagccg cccagttgga tccgcatcgg cgcttggctc gcttgcaagg actgcgcgtc
     1201 ggtattcgcg accatgaaat cgacgccggt gagtttggcg ccgatcatgg tgttgaccgc
     1261 gttgccgccg ccgccaccga taccgataac cttgatgcgc gcggtcaggc tattttgctt
     1321 ttcgattatt tcaaacatgt tctgtcctcc tccactaaac ttgaaaattg tatccccgtt
     1381 taaaaaaact cactgagcca atccgacatg cggtgcttca ccttggcgag catcttgtcg
     1441 tcccgcggcc gcgccacgcc gcgctcctgg cccttcatgc catggagcac cagcccgaca
     1501 gcggcggcgt gaatcggatt atcgacgata tcgaccaaac cgccgacctg catcggcaca
     1561 cccaagcgca ccggcaaacc gaaggagcgc accgccatct cgacggcgcc gggcagtagc
     1621 atggcaccgc cggtggcgac gatgcccgag gccaaggagc cgtcgaaacc ggacttggcg
     1681 atttctttct ggaccaattc gaagatctcg tccaagcgcg gctcgatgat ttcacagaga
     1741 atttgccgcg acaccgttcc cgcctctttg ccggcgatgc tcggcacctc gacccgttcc
     1801 tgatccatcg ccatcgccgc tttggcgaag ccataacgtt gcttgatgcg ctcggcgtcg
     1861 ccaaacggcg tgcgcaaacc ggcggcgata tcgttggtca catgattgcc gccgatgctg
     1921 agcaccgcag tatgcttcac cgtgccgtca tgaaataccg tgatatcggt ggtgccgccg
     1981 cccatatcga cgagaaccac gcccaactcg cgctc
//
LOCUS       DATIRS010000186         2590 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_309285, whole genome shotgun sequence.
ACCESSION   DATIRS010000186 DATIRS010000000
VERSION     DATIRS010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2590)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2590)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2590
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_309285"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..367)
                     /locus_tag="VLM90_02345"
     CDS             complement(<1..367)
                     /locus_tag="VLM90_02345"
                     /inference="COORDINATES: protein motif:HMM:NF013086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HSQ11820.1"
                     /translation="MAQAENNNWDLEADVIVIGSGAAGLPAAIKAIDNGASVIVVEAN
                     YDVGGHAILSGGHMALGGGTIAQKKYNIPDSPDTVFSDLTDWSIVQPNGTPDFRYNDR
                     AVMRAFADHCAMAFEFLLAN"
     gene            622..2355
                     /locus_tag="VLM90_02350"
     CDS             622..2355
                     /locus_tag="VLM90_02350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11821.1"
                     /translation="MHIPAWGKLLLVLLSLGFLFGPGIQHHWRIARDPYFVPFDAVQY
                     IPAFFKFDANDPVPTTYIKEYFLNAICPPLYKVSLALGARFADVRDVQLVLMYAAYGL
                     FVAVMGRIGWLVGGAALSFAVMALTISAWIFIGLGFIGGAPRMYGYPMIAITLYALVR
                     DRPRLLGLMAILGALLYPIVASIAGICLSGWLILPLFAKQSSVTRWSLRRRLATLAAA
                     GLLTVSCLVPLLLGHGAYGRRLVAADTVNYPEAGADGNYRPHDQLPYPLFGQESLSYY
                     LGPLSSHGDAIAPWVNLHQNLDPVTLLAALAAAALAILVVVSAGLRRVLHSDQRGAGI
                     RVLGFFIICVLLHVVAWLAAPYLYIPTRYLMFSLPFIVTLIFPWSLYLLVGRIGRFQT
                     APQLRDCTFLAIIGVYLIAFGGRGNVEIEKGFMVAKASQPLFAAIAALPKNSLVAGWP
                     YGEIKNIEYAARRNAFLTAQLHQVLHLEFVETMRQRMDAVFEAYFSVDAAPLRRLRDQ
                     FGVIHLLVEAHHFNDPKRPPEYFSPWRSRIGPRLAAVRDKAYLMNASLQQEAAVFNRN
                     GLVLLDLARLP"
BASE COUNT          478 a          782 c          720 g          610 t
ORIGIN      
        1 cattggccag taaaaattca aatgccatgg cacagtgatc ggcgaaggcg cgcatcaccg
       61 cccggtcgtt gtagcggaag tccggagtgc cattgggttg aacgatcgac caatcggtga
      121 gatcggagaa caccgtgtcc ggcgagtcgg gaatattata tttcttctgc gcgatggtgc
      181 cgccgcccag ggccatatgg ccgccgctga gaatcgcgtg gccgccgacg tcgtaattcg
      241 cttcgaccac gatcaccgac gcgccattgt cgatggcttt gatcgccgcc ggcaagcccg
      301 ccgcgcctga gccgatgacg atgacgtcgg cttcgagatc ccaattattg ttctctgctt
      361 gtgccatgat tccgcagctt cccttcttgt ggttatgatg tcgaatccag gtttacagcc
      421 cccaatgata tcccaaagtt cgttgtcgcg cgcaaccgcc acagccgacc gcgccaacaa
      481 ttttgctgcg cggtcttaag acaacttcgc aatcggctgg ctagagtgag tcattggcgg
      541 cggcttgacc atgcaaataa ggtagcggag aatacgttaa tcattgacgc aactcgcttt
      601 gggcatttcc gaggaacacc gttgcacata cctgcctggg gcaaactact cctcgtcctc
      661 ttgtcgctgg gttttctctt tggccccggc atccagcacc attggagaat cgcccgcgac
      721 ccttacttcg tgcccttcga cgctgtgcag tacatcccgg cgtttttcaa gttcgacgcc
      781 aacgacccgg taccgacgac ctacataaaa gaatactttc tcaacgccat ctgcccgccc
      841 ctatacaaag tctcgctcgc gctcggcgcc cggtttgccg acgtgcgcga cgttcaattg
      901 gtcttgatgt acgcagccta cggcctcttt gtcgccgtca tggggcgcat cggatggctg
      961 gtgggtgggg ccgcgctcag tttcgcggtc atggcgttga ctatcagcgc atggattttt
     1021 atcggcctgg gattcatcgg cggggcaccg cggatgtacg gttatcccat gatcgcgatc
     1081 actctttacg ccctggtgcg cgatcgcccg cggctgcttg gcctaatggc gatactcggc
     1141 gcgttactct atccgatcgt tgccagcatc gccggcattt gccttagcgg ttggctgatc
     1201 ctgccgcttt ttgcaaaaca gagtagcgtt acccgctggt cgctgcggcg gcggctggcg
     1261 actttggcag cggctgggct tctcaccgtg agctgcctcg tgccgttatt gctggggcat
     1321 ggcgcctatg gccggcgtct ggttgccgcc gataccgtca actatcccga agccggggcc
     1381 gatgggaact atcgtcccca cgatcagctt ccctatccgc ttttcggtca agagtcgctg
     1441 tcgtactatc tcggtcctct gtctagccac ggcgatgcca tcgcaccctg ggtcaacctg
     1501 caccagaatc tggaccccgt gacgctgctc gccgcgttgg ctgccgcggc attggctatt
     1561 ttagttgtcg tctcagcggg tctacgcagg gtcctgcata gcgatcagcg tggcgccgga
     1621 atccgcgtgc tcggattttt cattatctgc gttttgctac atgttgtcgc ctggctagcc
     1681 gcgccctatc tttatatccc tacccgctac ttgatgtttt cgttgccgtt tatcgtgact
     1741 ttgatctttc cttggtcgct atatttactt gtcggccgca tcggcagatt ccaaacagcg
     1801 ccgcaactgc gcgactgcac attcctggcg atcattggtg tttatctcat cgccttcggc
     1861 gggcgcggca acgttgagat tgaaaaaggc ttcatggtgg caaaggcgtc acagccgtta
     1921 ttcgcagcca tcgccgccct gccgaaaaac agtttggtcg ccggttggcc ctacggcgaa
     1981 atcaagaaca tcgaatatgc cgctcggcgc aacgccttct taaccgcgca actgcaccaa
     2041 gtgctccacc ttgaattcgt cgaaaccatg cgccagcgca tggacgccgt cttcgaagct
     2101 tactttagtg tcgacgccgc gccgcttcgg cggctaagag accagttcgg cgtcatccac
     2161 ctgttggtcg aagcgcacca ctttaacgat cccaaaagac cgccggaata tttctcgccc
     2221 tggcgttcgc ggatcggccc gcgcctggca gcggtgcgag ataaggccta tctgatgaac
     2281 gcatcgctgc agcaagaagc ggcggtgttc aatcgcaatg gactcgtttt gctcgatctc
     2341 gcgcgcctgc cgtagctgag gagccggctg cgaaagcttc ctgggcaact cgtcgggttt
     2401 gacgccaggc cggcaagttt ctataaaagc ttatggctgc gccacgatca cgatgccgca
     2461 acggtgtgag gtcgtcgagc cggtgcgtcg gcagatactc ccgaagcgat agtcaccgcg
     2521 ccggtaaagt aatgactcat tgactgccga aagctcatag agggaaagac ccatggcgaa
     2581 aatcaatgga
//
LOCUS       DATIRS010000187         1535 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1391093, whole genome shotgun sequence.
ACCESSION   DATIRS010000187 DATIRS010000000
VERSION     DATIRS010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1535
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1391093"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1155)
                     /locus_tag="VLM90_02355"
     CDS             complement(<1..1155)
                     /locus_tag="VLM90_02355"
                     /inference="COORDINATES: protein motif:HMM:NF016032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0042398 - cellular modified amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-cysteine ligase family protein"
                     /protein_id="HSQ11822.1"
                     /translation="MSVIEKKEELEAYFHDAGKTREHWRVGTEYEKVGIDRVTGKAIP
                     YSGPRGVNRILRELSDRFGWAPEEQDGNIIALSRDKAQITLEPGGQIELSGEPCDSIH
                     CTYGEFTQHIRELLEVSEPLDVVFLGLGMQPVRRIEEIEWGPKKRYRIMGPYMPKVGT
                     LGQRMMKQTATVQTNIDFLDEKDAMLKFRTGMGLAPILIAMFANSPICDGQLNGYRSF
                     REHIWTDTDRSRSGLLKFAFSSDASFAHYVEYALDVPMYFIIRHHDYIDMTSMTFRQF
                     LQFGHNGERATMEDWADHLTTLFPETRIKRYIEIRSVDSQPPELMPALSALTKGVFYD
                     DDCLHAAWDLVKGWTWDERMETYLDSHKNALAARFRRHTLFDLAKELFEIG"
     gene            complement(1142..>1535)
                     /locus_tag="VLM90_02360"
     CDS             complement(1142..>1535)
                     /locus_tag="VLM90_02360"
                     /inference="COORDINATES: protein motif:HMM:NF013197.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11823.1"
                     /translation="DGMAASLMARREVDLVLVGADRIAANGDVANKIGTYTLAVLARR
                     HAIPFYVAGPTSSIDVNCRSGADIPIEQRDPKEVSHIFGKSLAPKGIHILNPAFDVTA
                     QELITAIITEKGVIHPPYQQNIRNYVSH"
BASE COUNT          299 a          455 c          456 g          325 t
ORIGIN      
        1 accaatctcg aagagttcct tggccaggtc gaaaagcgta tggcggcgga aacgcgccgc
       61 gagcgcgttc ttatgcgaat cgagataagt ttccatccgc tcgtcccagg tccaaccttt
      121 gacgagatcc catgccgcgt gcaagcaatc gtcgtcgtag aaaactccct tggtcaacgc
      181 cgacagcgcc ggcatcaact ccggcggctg gctgtccacc gaacgaatct cgatgtagcg
      241 cttgatgcgg gtctcgggaa aaagcgtcgt cagatgatcg gcccaatcct ccatcgtggc
      301 gcgctcgccg ttgtggccga actgcagaaa ctgccgaaag gtcatgctgg tcatgtcgat
      361 gtaatcatgg tgtcgaatga tgaagtacat cggcacgtcc agggcgtact cgacgtagtg
      421 ggcgaaggag gcatcagagg agaacgcaaa cttgagcaaa cccgagcggc tgcgatcggt
      481 gtcggtccag atatgctcgc ggaaacttcg gtagccgttc aattggccgt cacagatcgg
      541 cgagttggcg aacatggcga tgaggatcgg cgccaatccc atgccggtgc ggaactttag
      601 catggcgtcc ttttcgtcga gaaaatcgat attggtctgg accgtcgcgg tctgtttcat
      661 catgcgctgg ccgagcgtgc ccaccttggg catgtacggt cccatgatcc gatagcgctt
      721 cttcggcccc cactcgatct cttcgatgcg gcgcaccggc tgcatgccga ggccgagaaa
      781 gaccacatcg agcggctccg acacttcgag cagttcgcgg atatgctggg tgaactcgcc
      841 gtaagtgcag tgaatgctgt cgcacggctc gccgctcaac tcgatttgac cgcccggctc
      901 cagggtaatc tgcgccttgt cgcgactgag cgcgatgata ttgccgtcct gctcctccgg
      961 cgcccagccg aagcgatcgc tcagctcacg caggatccgg ttcacgccgc gcggcccgga
     1021 gtacgggatc gctttgccgg tcacacggtc gatgccgact ttctcgtatt cggtgccgac
     1081 gcgccagtgc tcgcgcgttt tgcccgcgtc gtgaaagtag gcttcgagct cttctttttt
     1141 ttcaatgact gacataattg cgaatatttt gttgataggg aggatggatc actccttttt
     1201 ccgtgatgat cgccgtgatc aattcctgcg ccgtcacgtc gaacgccgga ttcaaaatat
     1261 ggataccctt gggcgccagc gatttgccga aaatatgcga cacctctttc ggatcgcgct
     1321 gctcgatggg aatatcggcg cccgaccggc agttcacgtc gatggacgaa gtcgggcccg
     1381 cgacgtaaaa aggaatggcg tggcgccgcg ccagcacggc aagcgtgtag gtaccgatct
     1441 tgttcgccac gtcgccgttg gccgcgatgc ggtccgcgcc gacgagcacg agatccacct
     1501 cgcggcgtgc catgagactc gccgccattc cgtcg
//
LOCUS       DATIRS010000188         3980 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1587505, whole genome shotgun sequence.
ACCESSION   DATIRS010000188 DATIRS010000000
VERSION     DATIRS010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3980)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3980)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3980
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1587505"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(109..381)
                     /locus_tag="VLM90_02365"
     CDS             complement(109..381)
                     /locus_tag="VLM90_02365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11824.1"
                     /translation="MQVRLGHARENFLSTFSARGRQKEVPALIYVTHHIEEILPMFKQ
                     TLVLRHGQVLHAGKTQDVLKPRVLQELYSAPLSLRKGGGRFWPVGR"
     gene            complement(416..1669)
                     /locus_tag="VLM90_02370"
     CDS             complement(416..1669)
                     /locus_tag="VLM90_02370"
                     /inference="COORDINATES: protein motif:HMM:NF044870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-propeller fold lactonase family protein"
                     /protein_id="HSQ11825.1"
                     /translation="MAMIRLDLSDLPPHQQVDRLKEQYLHLRGTNAEVRARVGALPVR
                     QYVSMLERGYRVALERDREGYLLKLWPDGSTARSGLRGAHSIACHSDGRVYTNTTDNR
                     VAVIDGGTRTVVKHIAVGDEPSHLELAHDGKRLYVANSGSNDVTIVDTTNDAVFMTAP
                     TGKRPLLPCVAANGEAVYLPSGPDRNVTVLGGDGELRKTVPVGLAPHDVAVSPDCRWA
                     YQPNSASHTVTVIDGKNYAVDGEVEVGLGPGHIVFDPESRFAYVANTLSDDVSVVRTG
                     DHEVVATIPAGAGAHLPALSSDGRYGYVANFAADSLTVWNCRTHGVIATIPVGIYPHF
                     FALSPDGKWLVVSNTGESSICVIDARDYEARVRLPVGGAPAHIAFSPDGELAFVGCES
                     SDEVAVVDLGRVNILDLVRAGATGA"
     gene            complement(1837..2832)
                     /locus_tag="VLM90_02375"
     CDS             complement(1837..2832)
                     /locus_tag="VLM90_02375"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ11826.1"
                     /translation="MVVDIHNHIVAGEQLQTFQAGLINSAGFHKPRGVVVTEKDIQAA
                     KWHGHRHSEVLGEVGTDFAFISPRPYTMMHSAKPEKIVHWYCQAVNDALALQVKMEPD
                     KFRAIGGLPQNAGVAVTNSFDEIDRCINDLGFVGIMINPDPGEGDGMTPAMGQEYWYP
                     LYEKMVKMDIPGLVHGASCKNPRESFHGHFITEESIAILSLVDSNVFKDFPKLKLIIS
                     HGGGSVPYQVGRWRSQLRGPNDTETFDQRLKQLYFDTALYSIESLKLLFRICGPERCL
                     FGTERPGAGSKTDPRTGKWYDDVKPNIDSIPWLTADDKAKIFDQNALQVFNRFKQ"
     gene            complement(2964..>3980)
                     /locus_tag="VLM90_02380"
     CDS             complement(2964..>3980)
                     /locus_tag="VLM90_02380"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ11827.1"
                     /translation="FLLSHIDSFAQFAALRLTLVTLGDSMMGYMVVNVIIAQWFVRRR
                     GRALAISSMGVGFAKVCMPVVAASLILWLGWRQTWFVFGLMTLGLLVLPALLIIRRSP
                     EAMGLLPDGATAPVAGADASAHQSAARMAETGAQDATWTRAEAARTTAFWLLVITFGI
                     SSIGVTGLNLHVYSYVTDAGYSAVVAATVMSIIASMQLASPLGWGLLAERIGVRYAAT
                     LRFVIQGCGLALAILTGNLLCLYAGFLLYGIGLGGNMVLPDMLWADYFGRQSLGKIRG
                     LGLLISHFLAAIGPPFFGFLFDITGGYGLSFAIFGAVLATSALLSLMLKPPRKANWTN
                     GALE"
BASE COUNT          900 a         1219 c         1110 g          751 t
ORIGIN      
        1 agtaatctta acaccttcgc ggcttttcga atgcgtcaac aggggtaacc gctgacaccc
       61 tccgaaacct ttgaactttt gaaccctaaa cccttgaacg gaatttattt accgcccaac
      121 cggccagaaa cgtccaccgc ctttacgaag cgacagaggc gcactgtaga gctcctgcaa
      181 tacccgtggc ttgagaacat cttgagtctt tccggcatgg agcacttggc catgacgcag
      241 aactagtgtc tgcttaaaca tcggtaagat ttcctcgatg tggtgcgtca cgtaaatcag
      301 cgcgggaact tctttttgcc tgccgcgagc actgaaggtc gataggaaat tctcccgtgc
      361 atgaccaagc cgtacctgca cgccggagat gagtccttag ttgacaatcg ccgcctcatg
      421 caccggtcgc gccagcgcga accagatcga ggatattgac tcgcccgaga tccaccaccg
      481 ccacttcatc cgagctttca cacccgacga acgccaattc accgtccgga ctgaacgcta
      541 tatgcgccgg cgcgccgccg accgggagtc gtactcgtgc ttcgtagtcg cgggcgtcaa
      601 tcacgcagat gctcgattcg ccggtgttgg aaactaccag ccacttgcca tctgggctca
      661 gagcgaagaa gtgcggatag atgccgacgg gaatagttgc gataacccca tgagtccggc
      721 aattccacac ggtcaaacta tcggcggcga agttcgcgac gtaaccatat cggccatccg
      781 aactcagcgc cggcaagtgc gcgccggcgc cggcgggaat ggtcgcgaca acttcatgat
      841 cgccggtgcg caccacggat acatcgtcgg aaagcgtatt ggcgacgtag gcaaagcggc
      901 tttcgggatc gaacacgata tggccaggtc ccaagccgac ttccacttcg ccatcgactg
      961 catagttttt gccgtcgatc acggtcacgg tgtgggaagc ggagttgggt tgataggccc
     1021 aacggcaatc cggcgacacc gccacatcgt gcggcgccaa accgacggga acagttttcc
     1081 ttagctcacc atcgccaccg agcaccgtga cattccgatc cggcccgctc ggcaggtaaa
     1141 ccgcctcgcc atttgcggcg acgcacggca gtaacggtcg cttgcccgtc ggcgcggtca
     1201 tgaacactgc atcgttggtg gtgtcgacga tcgtcacatc gttggagcca ctattggcga
     1261 cataaagccg cttaccatcg tgcgccaact ccaagtgcga cggttcgtcg ccgacggcga
     1321 tatgtttaac gaccgtgcgt gtcccgccgt cgattacggc gacgcgatta tccgtcgtgt
     1381 tggtataaac acgaccatcg gaatgacaag cgatggaatg cgccccgcgc aaaccggagc
     1441 gcgccgtcga accgtccggc caaagcttta gtaaataacc ttccctgtcc cgctcaagcg
     1501 caacccggta accgcgttcg agcatcgaga catactggcg taccggcagc gcgccgacgc
     1561 gggcgcgaac ttcggcattc gtgccgcgca aatgcagata ttgctctttc aaacgatcga
     1621 cttgctggtg gggtgggaga tcactgagat cgagtcgaat cattgccata gtcatccgtt
     1681 tggtcattgc tcaatcacgt aggatgggtt gagacgcttt gcgccgatac ccatcgcttc
     1741 ttccgagtta atcaagaacg atgggttgcc tcgctcgacg cggctaaccc atcctacgaa
     1801 cgcgcgactc gaaacgcgaa accgcggcag cgccacttac tgtttgaacc ggttgaacac
     1861 ttgcagcgcg ttctggtcga agatcttcgc cttgtcgtca gccgtgagcc agggaatgct
     1921 gtcgatgttc ggcttcacat catcatacca tttgccggtg cgcggatcgg tcttcgagcc
     1981 ggcccccggg cgttcagtgc caaacagaca gcgctcaggt ccgcagatac ggaacaagag
     2041 cttcagtgac tcgatgctgt acagcgcggt atcgaaatag agctgcttca gacgctgatc
     2101 gaaggtctcg gtatcgttgg gaccgcgcaa ctgcgaacgc caacggccga cttgataggg
     2161 caccgagccg ccgccatggg aaatgatcag cttgagtttg ggaaaatcct tgaacacatt
     2221 ggaatcgacc aacgaaagaa tcgcgatgct ctcctcggtg atgaagtggc catggaacga
     2281 ctcgcgcggg ttcttgcagc tcgcgccatg caccaggccg gggatatcca tcttgaccat
     2341 cttttcgtaa agcgggtacc aatactcctg gcccatcgcc ggcgtcatgc cgtcgccttc
     2401 gccgggatcg gggttgatca tgatgccgac gaagccgaga tcgttgatgc agcggtcgat
     2461 ttcgtcaaag ctgttggtca ccgccacgcc ggcgttctgc ggcaggccgc caatggcgcg
     2521 aaacttatcg ggctccattt tcacttgcag cgccagcgcg tcgttgaccg cctggcagta
     2581 ccagtgaacg atcttttccg gtttcgccga gtgcatcatc gtgtagggcc gcggcgagat
     2641 aaaagcgaag tccgtgccga cctcgccgag cacttcggaa tggcggtggc catgccactt
     2701 agctgcttga atatctttct cggtaacaac cacaccgcgc ggcttgtgaa accccgcgct
     2761 gttgatcaag ccggcctgga aggtttgcag ctgctcgccg gcaacgatgt gattgtgaat
     2821 atcgacaacc atgaaggatc ctcctgagtg atttgtccat ctacctaaca gagatcggcg
     2881 ctacggagca aactggactg ggtaaatgga gtattggagt gatggagtat tggatttcgg
     2941 atttccggaa acccaacact ccattactcc aacgctccat tagtccaatt cgccttcctt
     3001 ggcggcttca acattagact gagcagcgcc gaagtcgcca gcaccgcgcc aaagatcgca
     3061 aacgacagcc cgtagccgcc ggtgatatcg aagagaaagc cgaaaaacgg cgggccgatg
     3121 gcggcgagaa aatgcgagat cagcaaacct aaaccgcgaa tcttaccgag ggactggcgc
     3181 ccgaaataat cggcccagag catgtccggc aacaccatgt tgccgcccag accgatgccg
     3241 tagagtaaaa aaccggcata gaggcagagc agattaccgg tcagtatcgc cagcgccaat
     3301 ccgcagccct ggatgacaaa gcgcaaggtc gcggcatagc gcacgccgat tctctcggcg
     3361 agaagtcccc agcccaaagg tgaagccagc tgcatcgacg cgatgatgct catcaccgtg
     3421 gccgcgacca ccgccgagta gccggcgtct gtgacgtaag aatagacatg caggttgagg
     3481 ccagtcacac cgatactgga tatgccaaag gtaatcacca ggagccagaa cgccgtcgtc
     3541 cgcgccgctt cggcacgcgt ccaggtcgcg tcctgcgccc cggtctcagc catgcgcgcc
     3601 gcggactgat gcgcgctcgc gtcagcgccg gccactggtg ccgtcgcgcc gtctggcaac
     3661 aatcccatcg cctccggcga gcgccggatg atcaacagcg ccggcagcac caacagcccc
     3721 aacgtcatca agccgaacac gaaccaggtc tggcgccagc cgagccagag aatcagcgaa
     3781 gccgccacca ccggcatgca gactttggcg aaacccacgc ccatgctcga gatcgccagc
     3841 gcccggccgc gccggcgcac gaaccactgg gcaatgataa cgttgaccac catgtagccc
     3901 atcatcgagt cccccagggt caccagcgtc aagcggagcg ccgcgaattg agcaaaggaa
     3961 tcgatatgac tcaagagaaa
//
LOCUS       DATIRS010000189         2063 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_997899, whole genome shotgun sequence.
ACCESSION   DATIRS010000189 DATIRS010000000
VERSION     DATIRS010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2063
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_997899"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..724)
                     /locus_tag="VLM90_02385"
     CDS             complement(<1..724)
                     /locus_tag="VLM90_02385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11828.1"
                     /translation="MIVMIPFMLSVSKHGPFPMHRRAELRILSRLAGAMALFMMLSSC
                     STFTPTFDSVRLRETAGVIEEVKAFGKTLGIEPTEALSRTSQGGASLSMLWLWMQREG
                     TLALRAPVDIRLAIGLNVVKEAPKMEQVYRVDGYSVYHRQGSEFADPRSVATAGFAEE
                     ALVRRAKVILHEDLHGDVNFALPWEIEEAIVTPLGSLAVIEYLRHTGDEKNLQNALVS
                     LAEERKVSGELIALVEEAQRIFA"
     gene            complement(825..1667)
                     /locus_tag="VLM90_02390"
     CDS             complement(825..1667)
                     /locus_tag="VLM90_02390"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ11829.1"
                     /translation="MFRTYYALAIGKVKADGVNMKVIELPDPPSKEQEDALINGDVQA
                     ANLYLPNFLRRKLQGAPILGLATEWKSTMKGNGVFVRADGPVKTPKNLEGRLIATHQG
                     MHAIHKYLLRRAYGLDDGKLRWAGYPQEKLLGVLQSGQADAVVLLDQFFFRGEVAPGV
                     RCLYTDGEAWQKLTGFDEMIKHMVAAREDLLRDNPGIKDVLLRAFRESFAYSEAHLEE
                     VADVFLSRYEGDREALLASARYPRIEFTFTEKEQKLAQAEMQLLVDVGQIPHTAPIAS
                     LFAP"
     gene            complement(1857..>2063)
                     /locus_tag="VLM90_02395"
     CDS             complement(1857..>2063)
                     /locus_tag="VLM90_02395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11830.1"
                     /translation="YGVPAITYGPGFGTHLIDPTETKAGEEWDSPTGVRRGVGISNMV
                     NCTKVYAMAALDICNRKKEEVAKT"
BASE COUNT          422 a          624 c          574 g          443 t
ORIGIN      
        1 tggcgaaaat ccgctgcgct tcctcgacca gtgcgataag ttcgcccgac actttgcgtt
       61 cttcggccag cgacaccaga gcgttttgca aatttttctc gtcgcccgtg tggcgcaagt
      121 actcgatcac cgccaaagaa ccgagtggcg tgacgatcgc ctcctcgatc tcccagggca
      181 atgcgaaatt gacatcgcca tgcaggtctt catgcaaaat caccttggcc cgccgcacta
      241 acgcctcctc ggcgaacccg gcggtcgcca ccgagcgcgg atcggcgaac tcgctccctt
      301 gacggtgata cacgctgtag ccgtcgacac ggtagacttg ctccatcttg ggcgcttctt
      361 tcacgacatt gagaccgatc gccaggcgaa tatccaccgg cgcgcgcagc gccaatgttc
      421 cttcgcgctg catccacaac cacagcatgg aaagcgacgc gccgccctgg gaggttcggc
      481 ttaaggcctc cgtcggttca atgccaagag tcttgccgaa ggctttgacc tcttcgatca
      541 caccggcggt ctcgcgcagg cgaacagagt cgaaggtagg ggtaaaggtg gagcaagatg
      601 ataacatcat gaaaagtgcc atcgcaccgg cgagccggct cagaatcctg agctccgctc
      661 gccggtgcat tggaaacggg ccatgcttcg acacgctcag catgaacgga atcattacta
      721 tcatttcaaa tccctctccg ttcgttcctt cgataaactc aggacaggct ctgagactcg
      781 tcgaaggact tcgagaaggt atttcacctg cttgttgcga atttctacgg cgcaaatagc
      841 gacgcgatcg gcgccgtgtg cgggatctgc ccgacgtcga cgagcagctg catctccgct
      901 tgagcgagct tttgttcttt ctcggtgaag gtgaactcga tgcgcgggta gcgcgccgaa
      961 gccaacagcg cttcgcggtc gccttcatag cgcgacagaa acacgtcggc gacctcttcg
     1021 agatgcgctt cgctgtaagc gaaagactcg cggaaagctc gcagcaacac atctttgatg
     1081 ccgggattgt ctcgcagcag atcttcccgc gccgccacca tatgcttgat catctcgtcg
     1141 aaaccggtga gcttttgcca ggcctcgccg tcggtgtaga gacagcgcac gccgggcgcg
     1201 acctcgccgc gaaagaagaa ctggtcgagc agcaccaccg cgtccgcctg gccgctctgc
     1261 aacacgccaa ggagcttttc ctgcggatat cctgcccagc gcagcttgcc gtcgtcgaga
     1321 ccgtaagccc ggcgcaagag atatttgtga atcgcgtgca tgccttgatg ggtcgcgatg
     1381 agccggcctt cgagattttt cggggttttc accggtccat cggcgcgcac gaaaacgccg
     1441 ttgcccttca tcgtcgactt ccactcggtg gcgaggccaa ggatcggcgc gccctgcaac
     1501 ttgcgccgga gaaaattcgg caaataaaga ttcgccgcct gcacgtcgcc attgatcagc
     1561 gcgtcctcct gctctttgct cggcggatcg ggcagctcga tgactttcat gttgacgccg
     1621 tccgccttca ccttgccgat agccaaggcg tagtaggtgc ggaacatgca gaagcgattg
     1681 cgctagtggg cgaaggtcaa gtccatgaaa atgccttgtg cgagtctttt cgcggtgcga
     1741 cggtggccga gagcaaatat acttttcgtt caacggttca aggttcaaag gttcaatgtc
     1801 agagaagacc gggccgaacg ttgaactttt gaacttttga accttgaaca acagttttaa
     1861 gtttttgcca cttcttcctt tttccgattg caaatatcca gcgccgccat ggcgtagact
     1921 ttcgtgcagt tcaccatgtt cgagatgccg acgccgcggc gcacgccggt gggcgaatcc
     1981 cactcctcgc ccgccttggt ttcggtggga tcgattaaat gggtaccaaa gcccggaccg
     2041 taggtgatcg ccggcacgcc gta
//
LOCUS       DATIRS010000190         1781 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_211306, whole genome shotgun sequence.
ACCESSION   DATIRS010000190 DATIRS010000000
VERSION     DATIRS010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1781
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_211306"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(84..1214)
                     /locus_tag="VLM90_02400"
     CDS             complement(84..1214)
                     /locus_tag="VLM90_02400"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HSQ11831.1"
                     /translation="MARIIEVTDLSGAYASRLFVESGHEVIRVEWHNRGSLRYREPLL
                     GGGNNGESSAYHHFLNAGKKSLALDLDSTAGQEIFLRLVAQADVLIADTPLAIEDATL
                     IAANTKLVYSKIEDEEPDICAMARSGLMSLTGQPDQSPMVLGGDIAALATGIYVAVAT
                     AAGLLSAKKTGNGLIVTVSLREALESFAEQAMVEYSFSGVVTERRGSKGAITAISGAL
                     PCKDGHWVISQIHRPGRWNKFVEWVNDPELAADASLAEEENQIKRRDFILDRVLSWAS
                     QHAKNELVQEAQKRHFPASPVSTTLDLIDDPQLIARGFLRRIEHRQFGSITFPQGAIA
                     TMRKSAMAAAPRLGEHNREILSQLGYSSSDQQSLAAAGAVQG"
     gene            complement(1216..>1781)
                     /locus_tag="VLM90_02405"
     CDS             complement(1216..>1781)
                     /locus_tag="VLM90_02405"
                     /inference="COORDINATES: protein motif:HMM:NF024844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MaoC family dehydratase N-terminal
                     domain-containing protein"
                     /protein_id="HSQ11832.1"
                     /translation="ARRPRSADMTAEGSDLITTEMLSWIGRATAPTPLIVMTLSDVRR
                     YIDATGDRNPLWYDDDYAKAAGYKGCILPPALVGWVPFSIRENPDGSSAEAPDLRRQI
                     PVPANYTNVRNAGSETEWLQPVYPGEPLLTQSCLVDIVERHGRAGLGIYITQEEQILN
                     SGGETVMRRRHTMALFPEAKLAGAAKE"
BASE COUNT          332 a          513 c          545 g          391 t
ORIGIN      
        1 cagcgggcca tattggcgct ccgggatcgt gtcgccgata tgcgcgtctt cgaaacaaac
       61 ggattggtgc agcggcatgg gttttatcct tggaccgctc ccgccgcggc aagggattgt
      121 tgatcgcttg aagagtagcc caactgcgaa agaatctcac ggttgtgttc gccgagccgc
      181 ggcgccgctg ccattgcgct tttccgcatg gtggcgatgg cgccctgggg aaacgtgata
      241 ctgccgaatt gccgatgctc gatgcgccgc aaaaatccgc gcgcgattag ttgcggatca
      301 tcgattaaat ctaaagtcgt cgacaccggc gatgcgggga agtggcgttt ttgcgcttcc
      361 tgcaccagtt cattcttggc atgttggctg gcccacgaaa gcacccggtc gagaataaag
      421 tcgcgtcgtt tgatttggtt ttcttcttcc gccagtgagg catcggcggc gagttcggga
      481 tcgttcaccc actcgacgaa tttgttccaa cgtcccggtc gatggatctg gctgatgacc
      541 caatggccgt ctttacaggg tagggcgcca gaaatggcgg taatcgcgcc cttgctgcct
      601 cgccgctcgg tgacaacgcc ggagaagctg tattcgacca tcgcttgctc ggcgaagctt
      661 tccaatgctt cgcgtagcga cacggtaacg atcaacccat tgccggtttt cttcgcgctg
      721 agcagccccg ccgccgtggc gacagcgaca tagatgccgg ttgccaaagc cgcgatatcg
      781 ccgcccaaga ccatgggaga ttgatccggt tggccggtca atgacatcaa cccggagcgc
      841 gccatggcgc agatatcagg ttcttcgtct tcgatcttgc tgtaaacgag cttagtattg
      901 gcggcaatca gcgttgcgtc ttcgatggcg agcggcgtgt cggcgatcaa aacgtcggcc
      961 tgcgcgacca ggcgcaagaa tatctcctgg cccgcggtgg agtcgagatc gagcgccagg
     1021 cttttcttgc cggcgttgag aaaatggtgg taggcgctgc tctcgccgtt attgccaccg
     1081 ccgagcagag gttctcggta gcgcaaggag ccccgattat gccattcgac gcggatcact
     1141 tcatggccgc tttcgacgaa caaacgcgag gcgtaggctc ccgagagatc ggtaacttcg
     1201 atgatccgag ccatattatt ctttcgccgc accggcgagt ttggcttcgg gaaaaagcgc
     1261 catcgtgtgg cgccggcgca tgacggtttc gccgccggag ttcaggatct gttcctcttg
     1321 ggtaatatag atgcccaacc cggcgcggcc gtggcgctcg acaatatcca ccagacaact
     1381 ctgcgtcaaa agtggctcgc cgggatagac gggttggagc cattcggttt ctgagccggc
     1441 gttgcggacg ttggtgtagt tcgccggcac cgggatctgg cgccgtagat caggcgcttc
     1501 cgcgctcgag ccatcgggat tttccctgat gctgaacggc acccagccga ccaaagctgg
     1561 cggcaaaatg cagcctttat accccgcggc cttggcatag tcgtcgtcgt accagagcgg
     1621 attgcgatcg cctgtggcgt cgatatagcg gcggacatcc gacagcgtca tgacgatcaa
     1681 tggagtcggc gccgtggcgc ggccgatcca gcttaacatc tctgtggtga tcaaatcgct
     1741 gccttcggcc gtcatgtcag cgctccttgg tcgtcgagcg a
//
LOCUS       DATIRS010000191         4160 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1194884, whole genome shotgun sequence.
ACCESSION   DATIRS010000191 DATIRS010000000
VERSION     DATIRS010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4160
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1194884"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            82..1185
                     /locus_tag="VLM90_02410"
     CDS             82..1185
                     /locus_tag="VLM90_02410"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HSQ11833.1"
                     /translation="MTDAMQWIEPRDRRFDWLNVADWEQPQDDGWQPVRVTKAWREQW
                     PKKTARRAKSSAGMAVRFRTDSKKLVFRVTFVDAPDTPPATPASAWERSRPNFFSLYR
                     ERKYVDSMAGLTHFEPQEVTIFNDRDLAGAAEIQVLLPFYYRNAEVVVHAIGIDAGAQ
                     LEQAAPDQRPRIFFHGDSITQGHGVTSPRETYVWQVAEQLNCVGINFGFGGTAWADNI
                     VAQTIASRNDWDVLSIMLGTNSFSGKDATGKPETAAQYAAKYDAFLSTIRATAPTKPI
                     LCVTPILNRADLARGGNLNGERPELYREGITRVVRQRQRSDRQLHLADGLAMVNEPLF
                     LLVTDRVHPNDAGMHRIANGVVEALKPLLANLR"
     gene            complement(1274..1609)
                     /locus_tag="VLM90_02415"
     CDS             complement(1274..1609)
                     /locus_tag="VLM90_02415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11834.1"
                     /translation="MKVGQPTAGESRSCPHCRATILKSAATCPMCRHNLRFVSIGAEP
                     RTKQTSCPLWVEGTLQNASETESLEYYLLMEVRDEAGKVISRQSVGVGAIPQAAKRIF
                     SLRIETTPA"
     gene            complement(1606..2145)
                     /locus_tag="VLM90_02420"
     CDS             complement(1606..2145)
                     /locus_tag="VLM90_02420"
                     /inference="COORDINATES: protein motif:HMM:NF016408.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HSQ11835.1"
                     /translation="MALWNQASPEVSPEKPQPVPPVPTPTPTASTAAPSPAPTPVAPT
                     PKEIAPSGRRESIFGPGVTIEGKIEGDADIRIGGKFKGDIQIKGDLNLDKGAKVSAKV
                     QAANVTIGGELEGNVIAGAQVKLLESGQLVGDLKAATLTVVAGSRMRGHVEFGWSASE
                     VAKFSNGHAQEKEKVGAAG"
     gene            2755..3840
                     /locus_tag="VLM90_02425"
     CDS             2755..3840
                     /locus_tag="VLM90_02425"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSQ11836.1"
                     /translation="MKAEKPSDAAREAFHQRMHANNMYGLWELASQMTPQPQPKMVAH
                     MWPWSTLEPIVSESTRAVPVGDERRALQLFNPGLNGRWATTNNLIAAVQVLLPGEVAR
                     AHRHTPTAIRFIIEGSGAYTAVDGERVYMEPGDLILTPSWSWHDHGNETKDRIVWMDG
                     LDIPLIASLEAMFFQFYSQTQVPASRPAHTSQAMYGTGQLNPTWIKEKTSASPLLLYS
                     WEQTWKALDALRGQTGSPFDGISLEYRHPQTGGPVLPTMACRIQLLRPNEHTQAHRHT
                     GSAVYHVVQGQGQTIIDGKSFAWRKGDIIALPPWSMHEHVNSSAKADAVLFSIQDAPV
                     LNALGLYYEEEFSDNGGHQTVTSAFTA"
BASE COUNT          903 a         1268 c         1161 g          828 t
ORIGIN      
        1 tcatgcattc ccttgaactg ttcggcacca aggtcatgtc ggcgctcgga gcttagaagc
       61 aagtaatagg gaaaattagc aatgaccgat gcgatgcaat ggatcgaacc gcgcgatcga
      121 cgtttcgatt ggctcaatgt cgccgattgg gaacaacctc aggatgacgg ctggcagccg
      181 gtgcgcgtca ccaaggcatg gcgcgaacag tggccgaaga agaccgcgcg ccgtgccaag
      241 tcgtcagcgg gcatggcggt gcgttttcgc accgactcga agaaactggt ttttcgcgtc
      301 accttcgtcg acgcgccgga tacgccgccg gcgacaccgg cttcggcctg ggagcgctcg
      361 cggccgaatt ttttctcgct ctaccgcgag cgtaagtatg tcgacagcat ggccgggctc
      421 actcacttcg aaccgcagga agtaaccatc ttcaacgatc gagacctcgc cggcgcggcg
      481 gagatccaag tgctgctgcc cttctactat cgcaacgccg aggtcgtcgt gcacgccatc
      541 ggcatcgacg ccggcgcgca gttagagcag gctgcgccgg accaacggcc acggattttt
      601 ttccacggcg actcgatcac tcaaggccat ggcgttacca gcccgcggga gacctatgtc
      661 tggcaagttg ccgagcagtt gaactgcgtc ggcatcaact tcggcttcgg cggcaccgcc
      721 tgggccgaca atatcgtcgc ccagaccatc gccagccgca acgattggga tgtgctgtcg
      781 atcatgctcg gaacaaactc attttccgga aaggacgcga ccgggaaacc ggaaaccgcg
      841 gcgcagtacg cggccaagta tgacgcattt ctatcgacca tcagagccac cgcgccgacc
      901 aagccgattc tctgcgtgac gccgatcttg aaccgggcgg atctagctcg cggcggcaat
      961 cttaacggcg agcgccccga gttgtaccgt gaaggcatca cccgcgttgt ccgccagcgg
     1021 caacgcagcg acaggcaatt gcacctagcc gacggtttgg cgatggtcaa cgaaccgcta
     1081 ttcctgctcg tcaccgatcg cgtccacccc aacgacgcag gcatgcaccg catcgcaaac
     1141 ggcgtagtcg aagcgctaaa acccctgctg gcgaatctgc gctagttaga tactaaaaaa
     1201 aatcggccca aggcgctagg cgattgacag cgtacgcctt gggcccgtgg tcgactcagg
     1261 ataaaagttg cgcttatgcc ggggttgtct ctatacgcag ggagaagatt cttttcgccg
     1321 cctgcgggat cgcgccgacg ccgacgcttt gccgcgagat taccttgccg gcctcgtcgc
     1381 gcacttccat caggagataa tactcaagtg attcggtttc gctggcattt tgcagagtcc
     1441 cttcgaccca tagcgggcag ctggtttgct tggtccgtgg ctcggcgccg attgagacga
     1501 agcgcaagtt atggcgacac atcggacagg tcgccgcgct tttaaggatc gtcgctctgc
     1561 agtggggaca gctgcgcgat tcgccggccg tcggctgccc gactttcatc cggcggctcc
     1621 gactttttct ttctcctggg cgtggccgtt ggaaaacttg gcgacttcgc tggcgctcca
     1681 gccaaactcg acatgaccgc gcatgcgcga gcccgccacc accgtcagcg tcgctgcttt
     1741 gagatcgccg acgagttggc cggactccag taatttgact tgggcgccgg cgatcacgtt
     1801 accttccagt tcgccgccga tggtgacatt ggcggcctgc actttagctg aaaccttggc
     1861 gcccttgtcg agattcagat cgcctttgat ttggatatcg cccttaaatt taccgccgat
     1921 gcgaatgtcg gcgtcgcctt caattttgcc ttcgatggta acacccggtc cgaaaatcga
     1981 ctcgcggcgg cccgatggtg cgatttcctt aggcgtcggc gccaccggtg tcggcgcagg
     2041 tgacggtgcg gcagtgctcg cggtcggagt gggtgtcgga accggcggta ccggctgcgg
     2101 tttttctgga ctcacctcgg ggctagcttg attccacaat gccatggaaa cctccttgat
     2161 cacggaaacg attttcggat ggaaacggga gcattctcga caaacggata attttggagc
     2221 aagcgaagtg ccaaaaatcc aaaaagcagc aagaatctct agtcgaatgg ccacgcgcac
     2281 cctttgacat agacctgcgt caaaaactcg ataaaacgcc agaagtggca acaaatgaca
     2341 gcaaaaggca ctacccgcca aaagaaatag acaactaaaa attacgatta agacaacaac
     2401 tgtctgcgaa tagcttcaca aaaagcgcag ggaatagcag tcggcgaaca aaattgaact
     2461 gccggttcga aggaaggtca ctggaagctg ccgtgatcgg tgcggcacag ctcattgccc
     2521 gtcatgtaaa actgcagtat ttgttttaat gaccggagtt cgactccttt tgcaggtcgc
     2581 cgcttgccgc ttacactggc gctgacccta gccttcgctc aagtgatggg caagcgccat
     2641 cgcttgaccg acatcggtaa gcgtattagc gttttcttca agctcgataa tgatgactcg
     2701 cgcgcggaag ttgagtcggt tccgagccgg aacatttcac cgagagggaa gattatgaaa
     2761 gccgaaaagc catccgatgc cgcccgcgaa gcctttcacc agcgcatgca cgccaacaac
     2821 atgtacggtc tgtgggagct cgccagtcag atgacgcccc agccgcagcc taaaatggtc
     2881 gcccatatgt ggccttggtc gaccttggag ccgatcgtca gcgaatcgac tcgagctgtg
     2941 ccggtgggcg acgagcggcg cgccttgcag ctatttaatc ctggactcaa cggccgttgg
     3001 gcgacgacga ataatttaat cgccgcagtg caagtgctgc tccccggcga agtagcgcgg
     3061 gcgcaccgcc acacgccgac ggcgatccgc ttcattattg aaggtagtgg tgcgtacacc
     3121 gccgtcgacg gcgagcgcgt ctacatggaa ccgggcgatt tgattctgac gccaagctgg
     3181 tcctggcacg accatggcaa cgaaaccaaa gaccgcatcg tctggatgga cggcctcgac
     3241 atcccgttga tcgcctcgct ggaagcgatg ttttttcagt tttacagcca gactcaagtg
     3301 ccggcatcgc gcccggcgca tacttcccaa gccatgtacg gcaccggcca actcaatccg
     3361 acctggatta aagagaagac cagcgcctcg ccgctgctgc tctactcttg ggaacagacc
     3421 tggaaagcgc tggacgccct acgcggtcaa accggcagcc cattcgacgg catctcgctg
     3481 gagtatcgcc acccgcagac cggcggcccg gtgctgccga ccatggcttg ccgcatccag
     3541 ctgctgcgcc ccaatgaaca tacccaagcg caccgccata ccggcagcgc ggtctaccat
     3601 gtcgtccaag gccaaggcca gacgattatc gacggcaaaa gcttcgcttg gcgcaaaggc
     3661 gacatcatcg ccctgccacc ctggtcgatg catgaacatg tcaatagctc ggccaaagcc
     3721 gacgccgtcc tgttctcgat ccaagacgcc cccgtgctca acgccctcgg gctctactac
     3781 gaagaagagt tcagcgacaa cggcggccat caaacggtca catctgcatt cacggcgtga
     3841 gacaatggaa cttctcggcc ttgatgcgtc ctgaatcgaa gcaacgagaa gccgaaaacg
     3901 ttaccttcgg cgctttgcgc ctccacccac ccgacaattt cgctcaaatt ctattcgttc
     3961 cggtccgata ctcgcagtaa tccgaaaatc ccgttattcc gttttactac atccaggcta
     4021 caacgtctgc tcatgtatcg ggcggcaacg gttcttcaac ggagcgcggg ttttctcacc
     4081 cgcacgaata cgcggacaag aatgtccgcg ctccgtttga ctccgacctt cgtgctgata
     4141 gcccgtggtg agcgcagtcg
//
LOCUS       DATIRS010000192         1573 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_309952, whole genome shotgun sequence.
ACCESSION   DATIRS010000192 DATIRS010000000
VERSION     DATIRS010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1573
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_309952"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(46..>1573)
                     /locus_tag="VLM90_02430"
     CDS             complement(46..>1573)
                     /locus_tag="VLM90_02430"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSQ11837.1"
                     /translation="AAHRPSELSGGQQQRVAIARALVNDPPVILADEPTGALDSKSGD
                     EVLALLKQLHAEGRTIILITHAENVAQHAGRVVRIQDGRILEDTGTCTDDATESVAAN
                     NRSFESAVGLMASAQEALVTAWRSLRVNIFRTMLTLLGIIIGVAAVVAMLAVGEGSRQ
                     KVLDRISSFGTNLMLIRPGAAGMRNTGDIVTLVPEDAAAIKALPNIESALPERNSRAT
                     VRFGNVDYQTSVQGTGEDFPSARDWPVAEGQFFNADDMKQYAAVVVLGRTVAKTLFPD
                     GSSPVGRYILMKSVPFVVIGVMTEKGASPNGSDQDDVIFVPIKTGLVLLFGKNYLSSI
                     TIKVKDAADINATQQQVETLLKARHNAEDFSVRNMASFLQAAIETQDTFTLLLGTVAA
                     ISLLVGGIGVMNIMLVSVVERTREIGIRMATGARMRDIMLQFNIEAAVVCAAGGLLGI
                     CVGVIAGLVLRFSGMSVVFSVMPAALAFACASATGLAFGYLPARKAAQLDPVVALASE
                     "
BASE COUNT          297 a          471 c          507 g          298 t
ORIGIN      
        1 agagggcgac tgtaccgttc aacagatatt tacgcataga gcacctcact ccgaagctag
       61 ggcaacgact ggatcaagct gggcggcttt gcgggccggc agataaccga acgccaggcc
      121 ggtggcggaa gcgcaggcga aggcgagcgc cgcgggcatg actgagaata ccacgctcat
      181 gccgctgaag cgcagcacca gcccggcgat gacgccgacg catatgccga gcaagccgcc
      241 ggcggcgcac accaccgcgg cttcgatatt aaattgcaac atgatgtcgc gcatgcgcgc
      301 gccggtggcc atgcggatac cgatctcgcg ggtgcgctcg accacgctga ccagcatgat
      361 gttcatgacg ccgataccgc cgaccagcag agagatcgcc gccaccgtgc ccaagagcaa
      421 tgtgaaggta tcctgggttt ctatcgccgc ttgtagaaac gaagccatgt tacgcacgct
      481 gaaatcctcg gcgttatggc gcgccttgag gagcgtctcg acctgctgct gggtcgcgtt
      541 gatgtccgcg gcatctttga ctttgatggt aatgctgctc aaataatttt tgccaaagag
      601 cagcaccaat ccggtcttga tcggcacgaa aatgacatcg tcctggtcgc tgccgttggg
      661 cgacgcgcct ttctcggtca tcacgccgat gacgacaaag ggcacgctct tcatcaaaat
      721 gtacctgccg accgggctgc tgccgtcggg gaagagggtt ttcgccaccg tgcggccgag
      781 gacaacgacg gcggcgtatt gcttcatgtc atcggcgtta aaaaactgtc cctcggccac
      841 cggccaatcg cgcgccgacg ggaaatcctc gccggtgccc tgcacggaag tttgataatc
      901 gacattgccg aaacgcactg tggcgcggct gttgcgctcg ggcagcgcgc tttcgatgtt
      961 cggcaaggct ttgatcgcgg cggcgtcctc cggtaccagc gtgacgatat cgccggtgtt
     1021 gcgcatgccg gcggcgccgg gtcggatcaa catcaaatta gtcccgaacg agctgatgcg
     1081 gtcgagtact ttttgccggc tgccttcgcc caccgccagc atggcaacca cggcggcgac
     1141 gccgatgatg atgccgagca aggtaagcat ggtccgaaag atgttgacac gcagcgagcg
     1201 ccaagcggtg acgagcgctt cctgggcgct cgccatcaag ccgacggcgc tttcgaaact
     1261 gcgattgttt gccgcgacgc tttccgtcgc gtcgtcggtg caggttccgg tgtcttcaag
     1321 aattcggccg tcctggatgc gcacgacgcg gccggcgtgc tgggcgacgt tttcggcgtg
     1381 ggtgattaga atgatcgtgc gcccttcggc gtgaagttgt ttaagcagag cgaggacttc
     1441 gtcgccgctc ttgctgtcca aggcgccggt aggctcgtcg gcgaggatca ccggcgggtc
     1501 gttcaccagg gcgcgcgcga tggcgacgcg ctgctgctgg ccgccggaaa gttccgaggg
     1561 acggtgcgcg gcg
//
LOCUS       DATIRS010000193         4328 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1096774, whole genome shotgun sequence.
ACCESSION   DATIRS010000193 DATIRS010000000
VERSION     DATIRS010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4328)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4328)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4328
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1096774"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1434
                     /locus_tag="VLM90_02435"
     CDS             <1..1434
                     /locus_tag="VLM90_02435"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSQ11838.1"
                     /translation="CRAAFVQNAAVAARLVNLQGQLPALQRLIVMDDSGAGIANALNF
                     HQLLERGAGADGLAARLQAVQGNDLATIMYTSGSTGEPKGVMRSQDNLLANITNGAAI
                     TVSAPDELTVNILSLNHLFGRFGFLKSAVTGRTTAIIEAAETKVDLAVIEQLSPTGLA
                     VVPRIMERIWECLLAQDGNQESWRNLERLDDKRSRAGLSAADSRCFDDLKAQLKANVR
                     RAFGGRIKYVAYGGAAMPPRIMRFFELIGLPLIGSYGSTECGGVTLCGIGENRPGNLG
                     KPFANVQIRIAADGVILVRGPTVSPGYFKNPEATREAFNEEGWYCTGDIGVIEADGSL
                     QITGRKKDIFSCSDGSNIYPGFIELQLENEPYISQAVLLGDQRPFIAALIFPDRQKIA
                     ESLNRDIASLSEAEIAAALSAEIERVNGRLEFYERIRQIAVVQSEFPAEVRSINHFHK
                     VKVNREQVALRYRQQIDAIYRTALQED"
     gene            1436..2179
                     /locus_tag="VLM90_02440"
     CDS             1436..2179
                     /locus_tag="VLM90_02440"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ11839.1"
                     /translation="MTQVALITGGGGGIGGAVGRRMAAAGITVGIADYDGGAAERVKA
                     DIVAAGGKADAWAIDVTVAREVKAVVTDVFRRYGRIDILANIAGGSAYTKRIEEFTWA
                     EWQEVMNANLKGTFLMCREVAPFMQKQKSGRIINTASNYGVTGSALRTPYAAAKAGII
                     TFTKSLALELAPDLVLANTVAPGPTDTPRVMEKESPEARKQRWWSQIPLGRTALPEDL
                     AEMYYFLTTPESAAITGQTFHVNGGVVMP"
     gene            2176..2925
                     /locus_tag="VLM90_02445"
     CDS             2176..2925
                     /locus_tag="VLM90_02445"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ11840.1"
                     /translation="MKLKDKVAVVTGAAQGIGRATALMMGREGAKLIVADLQAEKAQS
                     VANELIALGAEALALEVNVADESSVKRMANRTFERFGRADILVNVAGIYFPKAAVVDL
                     TEEDWDRTININVGSNFLCCREFVPAMRAQKSGRIISLASGIGHYGMRQFSHYAASKA
                     AVMGFVKALAREVGPDGITVNAICPGSANTSMPRQHRSEEEVMARLSSTPLPHILEPE
                     DIAGSIVFLASDAAKFITGQSYNINSGTYMF"
     gene            3465..4016
                     /locus_tag="VLM90_02450"
     CDS             3465..4016
                     /locus_tag="VLM90_02450"
                     /inference="COORDINATES: protein motif:HMM:NF018404.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ClpX C4-type zinc finger protein"
                     /protein_id="HSQ11841.1"
                     /translation="MATKISGFGFVECADLINGQKYGAALKTFQQAVANFLDSKTTPK
                     RSEIARQLFQIGSTLEETLTHAFGDKWESQIPQFADEHKLLTCSFCGKNQNEVGKLIA
                     GPSVHICNECVRSCDEILTKENVEESETKLKAAAGVAEERLCGICMEARETDELIFLP
                     HAAYMCAGCLEEIQLVRDKREEK"
BASE COUNT          915 a         1196 c         1337 g          880 t
ORIGIN      
        1 tgccgggccg cctttgtcca gaacgcggcg gttgccgccc gcctagtcaa tctccagggg
       61 caattgccgg ctttgcaacg gctgatcgtg atggacgaca gcggcgccgg gatcgccaat
      121 gcgctcaact ttcaccagct gctcgaacgc ggtgccggcg cagacggctt ggcggcgcga
      181 ctccaagcgg tgcagggcaa cgacttggcg actatcatgt acacgtccgg ttccactggc
      241 gaacccaaag gggtgatgcg tagccaagac aatctgctcg ccaatatcac caatggcgca
      301 gcgatcacgg tgagcgcccc ggacgagttg accgtcaata tcctgagctt gaaccatttg
      361 ttcggtcgtt tcggttttct caaaagcgcg gttaccggcc gcactacggc gatcatcgag
      421 gcggcggaaa caaaagtgga tttggcggtg atcgagcagc tttcgcccac cgggttggcg
      481 gtggtgccgc ggatcatgga gcggatttgg gaatgtctat tggcgcaaga cggcaatcag
      541 gaaagctggc gaaatctcga acgtctcgat gacaagaggt cgagagccgg tttgagcgcc
      601 gccgacagcc gctgcttcga tgatctcaaa gcgcagctca aagcgaacgt gcggcgcgcc
      661 ttcggcggcc ggatcaaata tgtcgcctac ggcggcgcgg ccatgccgcc gcgcatcatg
      721 cgctttttcg aactgatcgg tttgccgctg atcggctcct atggctccac cgagtgtggc
      781 ggtgtgacgc tttgtggcat cggcgaaaat cgccccggca atttgggcaa accgttcgcc
      841 aatgtccaaa tccgcattgc tgccgatggt gtaattctcg tgcgcggtcc gacggtgtcg
      901 cccggctact tcaagaatcc cgaggcgacg cgcgaggcgt tcaacgagga gggttggtac
      961 tgcactgggg atatcggtgt gattgaagcc gacggttcgc tccagataac cggccgtaag
     1021 aaagatattt tcagttgttc ggacggctcg aatatttatc ccggtttcat cgagctgcaa
     1081 ttggaaaacg agccgtacat cagccaggcg gtgttgctcg gcgaccagcg gccgttcatc
     1141 gcggcattga tatttcccga ccgccaaaag attgccgaat ctctcaatcg tgatatagca
     1201 agtttgtcgg aagctgaaat tgccgcggca ttgtcggccg agatcgagcg ggtcaacggc
     1261 cggctcgaat tctacgagcg cattcgccag atcgccgtgg tgcagagcga gtttcccgcc
     1321 gaggtcagaa gcatcaatca ttttcataaa gtcaaagtga atcgcgaaca agtcgcgttg
     1381 cgctaccgac aacagatcga cgccatttat cggacggcgt tgcaggagga ttaaattgac
     1441 tcaagttgcc ttgattaccg gcgggggcgg cggcataggc ggcgcggtgg ggcggcgcat
     1501 ggcggcggcg gggattaccg tcggcatcgc cgattacgat ggcggcgcgg cggagcgggt
     1561 caaagccgac atcgtcgcgg ccggcggtaa ggcggatgcc tgggcgatcg atgtgacggt
     1621 ggcgcgggaa gtgaaagccg tggtcaccga tgtgttccgg cgctatgggc ggattgacat
     1681 tctcgccaat atcgccggcg gcagcgctta caccaagcgt atcgaagagt tcacctgggc
     1741 agaatggcag gaagttatga atgccaactt gaagggcacg tttctcatgt gccgcgaagt
     1801 ggcgccgttc atgcagaaac aaaaaagcgg ccggatcatc aacacggcgt cgaattacgg
     1861 cgtcaccggt tcggccttgc gcacgcccta cgcggcggcc aaggccggca tcattacctt
     1921 tacaaaatcg ctggcgttgg agttagcgcc ggatctcgtg ctggcgaaca cggtggcgcc
     1981 ggggccgacc gatacaccgc gggtgatgga aaaggaatcg cccgaagcgc gcaaacagcg
     2041 ctggtggtcg cagatcccgc tcgggcgcac ggcgctgccg gaggatttgg ccgagatgta
     2101 ctattttcta accacgccgg agagcgcggc gataaccggc caaacctttc acgtcaacgg
     2161 cggggtggtg atgccatgaa actcaaagat aaagtcgcag tggtaacggg cgcggcgcag
     2221 ggcatcggcc gggcgacggc gctgatgatg ggacgcgaag gcgcgaaatt aattgtcgcc
     2281 gacttgcagg cggaaaaagc ccagtcggtg gccaacgagt taatagcgtt gggcgcggaa
     2341 gcgctggcgc tggaagtcaa cgtcgccgac gagagttcgg tcaagcgcat ggcgaaccgc
     2401 acgtttgagc gtttcggccg cgccgatata ttggtcaacg tcgcggggat ttatttcccc
     2461 aaggccgcgg tggtcgacct gaccgaggag gactgggatc ggacgatcaa tatcaacgtc
     2521 ggcagcaatt ttctctgctg ccgcgagttc gtcccggcca tgcgcgcgca gaaaagcggc
     2581 cggatcattt ctctcgcgtc cggtatcggc cactacggca tgcgccagtt ctctcactac
     2641 gccgcctcga aagccgcggt gatgggattc gtcaaagcgc tggcgcgcga ggtcggaccg
     2701 gacggcatca ccgtcaacgc gatctgcccc ggttcggcca atacttccat gccgcgtcaa
     2761 caccgctccg aagaagaagt gatggcacgc ctgagttcga caccgctgcc gcatatcctc
     2821 gaacccgaag acatcgccgg ctccatcgtc ttcctcgcca gcgacgcggc gaagttcatc
     2881 accggccaat cgtataatat caacagcggg acgtacatgt tttgacgatg cggcgtacgc
     2941 ttccgtcagt cgccgcaaat aacttcatgc accacgaaga acccaacacg gcgtagccgc
     3001 aagtcaaatt cgaaatattt cccgcaaagg ccgcaaaggt cgcaaagttc ggagattaag
     3061 gctgagactc attcgtcata attttgctct tcctcgtgcg agttcgacgt ctttgcccgt
     3121 ggcttgagcc atttccgaat tcgcacttcg ccttctcgat catttgcgca aagtgcgcgc
     3181 ttggttcgct aaggacaagg cggtgagcga gcaggatgac cttgtcgtca gcgctcgcca
     3241 ccgtttcatc gagttcgccg ctccaaagcg gcggtcctgt gtgccaagtt cttcgatcaa
     3301 tcttccataa aggcatggtc attccgttcc tggacgattg aaatatttcc caccgacgga
     3361 ttgggttact gtccgcgcgc ggaaattgtg ctacggtcga gtggatcgcg tgccgggatt
     3421 agtcccgatc gcaattgcaa cgcaggacgc ggaaggggtt cgtcatggcg acaaaaataa
     3481 gcggcttcgg gttcgtcgag tgcgccgatc tgatcaacgg gcagaagtat ggcgcggcgc
     3541 taaaaacctt tcagcaggcg gtggcgaact ttctcgattc caagacgacg ccgaagcgca
     3601 gcgagatcgc ccggcagttg tttcaaatcg gttcgacgtt ggaagagacg ctgacgcatg
     3661 cctttggcga caaatgggag tcgcagattc cccagtttgc cgacgagcac aagctgctga
     3721 cctgttcgtt ttgcggcaaa aaccaaaatg aagtgggcaa gctgatcgcc ggcccatccg
     3781 tccatatttg caacgaatgc gtccgcagct gcgacgaaat tctcaccaag gaaaatgtcg
     3841 aggagtcgga aacaaagttg aaagccgctg ccggagtggc ggaagagcgg ctctgcggca
     3901 tctgcatgga agcgcgcgag accgacgaac tgattttctt gccgcacgcg gcctatatgt
     3961 gcgcgggctg tctggaagaa atccaactcg tgcgcgacaa gcgcgaggag aagtgaacac
     4021 gtctcggggg cgaaacagcc gccgatgacc gattgatact tcacgaaatg gggtgatttc
     4081 catatggatc atgttcaagc tgggattttg gcgccgctgc cgaagctggc gcgttatttg
     4141 agtttatcgg tcaggatggg gtcccacacc gacgtcactg ccttatcagt ccgcgatttt
     4201 tactttccgt cgactttcct tgattatacc ggcaagccgt agagtttggc tgcgttgttc
     4261 cggccgagtt ggcgtttgat ctttgggtcg atgccttcgc agttgcgatc gacggcctct
     4321 ttcgagaa
//
LOCUS       DATIRS010000194         1695 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1293389, whole genome shotgun sequence.
ACCESSION   DATIRS010000194 DATIRS010000000
VERSION     DATIRS010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1695
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1293389"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..288
                     /locus_tag="VLM90_02455"
     CDS             <1..288
                     /locus_tag="VLM90_02455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11842.1"
                     /translation="QDGSVFTPPAMMWHQHFNTGATGARYLPPRLGGIKYSLGEGFGD
                     ITKVDKDVKQGGNQIEYYDEAPWIRKMFEEELAKSGTTTKMNPDFYKRPAK"
     gene            409..1041
                     /locus_tag="VLM90_02460"
     CDS             409..1041
                     /locus_tag="VLM90_02460"
                     /inference="COORDINATES: protein motif:HMM:NF018095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HSQ11843.1"
                     /translation="MLGPRLYLLPVCLLHVVILLEGPSAGAAENRAVVAGAPTANLRA
                     GAGVDHALQATLKEGDQVNVEKLEGEWYQVTAVDGQTGYIHKNLLKLGGEEPAPVVAQ
                     MAVISEIGKPTKESISTAAATPQAAVGNTPAVRRSKPQAGKAPAADVAAEEPSAAAVK
                     SPSILQMLEGHEDELMIAAAIAAVFFFVGWICGGNYSLRRDRKRRNQIRF"
     gene            1071..1652
                     /gene="plsY"
                     /locus_tag="VLM90_02465"
     CDS             1071..1652
                     /gene="plsY"
                     /locus_tag="VLM90_02465"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR00023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008374 - O-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HSQ11844.1"
                     /translation="MALTLAIVSYLLGSIPTGYLLGALAGVDVRKTGSGNIGATNVAR
                     TVGKGRGVATLLADAGKGFIPAYVAAHLGLAQSAVAIIGAAAFLGHLYPIFLKFQGGK
                     GVATALGVLLALAPLVAVISIVVFAVVIFIRRIVSLSSIAAALAAPISLWLLSYPATY
                     TVLATFLAAMIILRHCGNIQRLLAGTEPRMGFR"
BASE COUNT          337 a          467 c          514 g          377 t
ORIGIN      
        1 caggatggca gcgttttcac gccgccggcg atgatgtggc accagcattt caataccggc
       61 gctacgggcg cccgctattt gccgccgcgc ctgggcggga tcaaatacag cctcggcgaa
      121 ggcttcggcg atatcaccaa agtcgacaag gacgtcaagc aaggtggcaa ccagatcgag
      181 tactacgacg aggcgccctg gatccgcaaa atgttcgaag aagaactcgc caagtccggc
      241 acgacgacca agatgaatcc cgatttttac aagcgtccgg caaaataagc tcgcactaca
      301 aatggtctaa gcccgcccag ggttaattcc gggcgggctt ttttttggtg cgcgctcaat
      361 cggcgacaaa tattgcgagt tttctccgcg ctgtgatagg ttgggtggat gttgggaccg
      421 aggttgtatc tcctgccggt ttgtctgctg catgtggtca ttctgctcga aggcccaagt
      481 gccggggcag cggaaaacag ggccgtcgtc gccggtgcgc cgacggcgaa cctgcgcgct
      541 ggcgcaggag ttgaccatgc acttcaagcc acgctcaaag aaggagacca ggttaatgtc
      601 gagaagttgg aaggggaatg gtatcaggtg accgccgtcg acggtcaaac ggggtatatt
      661 cacaaaaatc tactcaagct cggcggtgaa gagcctgctc ccgtggtcgc gcaaatggcc
      721 gtcattagcg agattggaaa gccgacgaaa gaaagcatct caacggccgc ggctacgccc
      781 caagccgccg tcggcaacac gccagccgtg cgacggtcga agccgcaagc ggggaaagct
      841 cccgctgccg acgtcgcggc tgaagaaccg tctgccgctg cggtaaaatc gccgtcgatc
      901 ctgcaaatgc tggaagggca cgaagacgag ctgatgatcg cggcggccat cgcggcggtg
      961 tttttcttcg tcggctggat ctgcggtggc aattactccc tgcgccgcga tcgaaaacgg
     1021 agaaaccaga ttcgtttcta agcactttca gcatcgagtc tctcaccgca atggcgctca
     1081 ctctcgcgat cgtttcctat ctgttgggtt cgattccgac cggctacttg cttggagcgc
     1141 tcgcgggagt cgatgttaga aagaccggca gcggcaatat tggcgcgacc aatgttgccc
     1201 gcaccgtcgg caagggacga ggcgtggcga cgttgctggc tgatgccggg aagggtttta
     1261 ttccggctta cgtagcggcg cacttgggat tagcccagtc ggcggtggcg attatcggtg
     1321 cggccgcctt tttagggcat ctctatccaa tttttttgaa atttcaggga ggaaaaggag
     1381 tggctacggc gctgggtgtc ttgctcgccc tagcgccgct ggttgctgtg atttcgatcg
     1441 tggtatttgc agtcgtgatt tttatcagac ggatcgtttc ccttagttcc atcgcggccg
     1501 ctctggcagc gcccatttct ctttggctgc tttcgtatcc ggcgacttat accgtcctgg
     1561 cgacctttct tgccgcgatg attattttgc gccactgcgg caatattcaa cgcctgctcg
     1621 ccggcacgga gccacgcatg ggttttcgct aattttcgat aattacttcg acgcggcggt
     1681 tttgctggcg gccgc
//
LOCUS       DATIRS010000195         1533 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1096927, whole genome shotgun sequence.
ACCESSION   DATIRS010000195 DATIRS010000000
VERSION     DATIRS010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1533
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1096927"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1509)
                     /gene="aspS"
                     /locus_tag="VLM90_02470"
     CDS             complement(<1..1509)
                     /gene="aspS"
                     /locus_tag="VLM90_02470"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HSQ11845.1"
                     /translation="MATERVFSDQLGDWQRSVYCAEPRADSVGKPMTLLGWVHSRRDH
                     GGVIFVDLRDRSGLCQIVFNPETDAASHEKAKQIRSEDVIAVKGTLAKRSPETINPDL
                     ATGEVELVCKELRLLNASAVPPFPIDDETDANENTRLKYRYLDLRRPQSLSHLLLRYR
                     MTKLIRDYLDNLGFIDVETPVLTKSTPEGARDYLVPSRIYNGKFYALPQSPQLFKQIL
                     MVGGLDRYFQIVKCFRDEDLRADRQPEFTQLDMEMSFVQPENVMQVVEGMIALLFKEL
                     KGIDLKRPFARLTYEEAMNRFGSDKPDMRFGLEIRDFSDALRSCQAKVFAAAIQKGGV
                     VKGIRIPKGGELSRKDLDDMTPFVATFGAKGIAWTKITVEGWQSPIAKFLSEAEQREI
                     EKIAGAQVGDVVLFSADTAKIVHDALGNLRLHLGEKLGLIPEKDYALVWVVDFPLMEF
                     DPEEKRHVALHHPFTAPLDEDLPLLDSEPARSRSKAYDLAVNGTEIGGGSIRI"
BASE COUNT          287 a          470 c          453 g          323 t
ORIGIN      
        1 gatacggata ctgccgccgc cgatctcggt accgttgacc gccaaatcgt aggctttgga
       61 gcgggacctg gccggctcgc tgtcgagcaa cggcaagtct tcgtccaagg gcgccgtgaa
      121 cggatggtgc aaagccacgt ggcgcttctc ctccgggtcg aactccatga gcggaaagtc
      181 gacgacccaa accagcgcgt aatctttctc ggggatcaat cctaactttt cgcccaggtg
      241 cagacgcaga ttgccgagcg cgtcgtgcac gatcttggcc gtgtcggcgg agaacaagac
      301 cacgtcgccg acctgcgcgc cggcgatttt ttcgatctcc ctttgttccg cttcggacaa
      361 gaattttgcg atgggcgact gccagccctc cacggtgatc ttggtccagg cgatgccttt
      421 ggcgccgaag gtcgccacga acggcgtcat gtcgtccaag tctttgcgcg atagctcgcc
      481 gcccttgggg atgcggatgc ctttcactac gccgcccttt tggattgcgg cggcaaaaac
      541 tttcgcctgg cagctgcgca acgcgtcgga aaaatcccgg atctccagac cgaagcgcat
      601 gtccggcttg tccgaaccga agcggttcat cgcctcttcg taggtcaagc gtgcaaacgg
      661 gcgcttgaga tcgatgcctt tcagttcttt gaacagcagc gcgatcatgc cctcgaccac
      721 ctgcatgacg ttctccggct ggacgaagga catctccata tcgagctggg taaattccgg
      781 ctgacggtcg gcacgcaggt cttcgtcgcg gaagcatttg acgatttgga aatagcggtc
      841 gagcccgccg accatgagaa tctgcttgaa gagctgcggc gactgcggca gggcgtagaa
      901 tttgccgttg tagatgcggc tcggcacgag gtaatcgcgc gccccttccg gcgtgctctt
      961 ggtcagcacg ggcgtctcca cgtcgatgaa tcccaagttg tcgaggtagt cgcggatcaa
     1021 cttggtcatg cggtagcgca gcagcaggtg gctcaagctc tgcggccggc gcagatcgag
     1081 ataacggtat ttgagccggg tgttctcgtt ggcgtcggtc tcgtcgtcga tggggaacgg
     1141 cggcaccgcc gatgcgttca gcaaacgcag ctctttacaa accaactcca cttcgccggt
     1201 ggcgagatcg ggattgatcg tttccggcga ccgcttcgcc aaagtgcctt tgacagcgat
     1261 cacgtcttcg gagcgaatct gtttcgcttt ctcgtgcgac gctgcgtcgg tttccggatt
     1321 gaaaacgatc tggcaaaggc cgctgcggtc gcgcagatcg acgaagatca ccccgccatg
     1381 gtcgcgccgg ctatgcaccc aaccgagtaa ggtcatcggc ttgccgaccg aatccgccct
     1441 tggctcggcg caatagacgc tgcgctgcca atcgcccaac tgatcgctaa aaactcgctc
     1501 cgtcgccatt aacccgcctt cctcgccgcc aat
//
LOCUS       DATIRS010000196         1719 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_113282, whole genome shotgun sequence.
ACCESSION   DATIRS010000196 DATIRS010000000
VERSION     DATIRS010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1719)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1719)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1719
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113282"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            321..1493
                     /locus_tag="VLM90_02475"
     CDS             321..1493
                     /locus_tag="VLM90_02475"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ11846.1"
                     /translation="MPDFKLISADSHVNEPPAAWERVQKEYGERAPKVVRDPAGKPKG
                     TWLIIDGLPPVGLSHYSKGLAVGKNRGISEVEQEKHFATIRFNETFRYEDYPGGWEPS
                     ARLQDQDADGVEAEVLFSSAVRQLYSIVDEPFQRAIFHSYNAWLHEFCSGNPNRLLGL
                     ALLPILDMEHTVADIYHYAKLGFRGVQIPTRIKDSGYYEAKYEPMWRALEETGMIVNV
                     HTSVTQGIARTHYEGPREQDPVKEPIGFARKQVPAQQFIGNMILSGNFDRHPKLRVVC
                     AEFDIGWVANMVQQVDSWFGRASTFDADRNLNQRPPSEYFKSNIYFTYQDDRAGVLTT
                     PVYGENNFLWASDYPHGVTTWPFSKEAVDRNCEGIDPKIKRQLGRNNAAKLYGLPV"
BASE COUNT          399 a          520 c          474 g          326 t
ORIGIN      
        1 cctaagggga tgcggaccca aacttgacaa tccggcgccg actctcctat cgtcgcctaa
       61 aaatattctt atgccttaca cagccgaacg ggggcagcct tcgcgatctg ccgcgacatc
      121 atgccggggt ggcgagggcg gtttttcgcg cgcacgcgga aatccaggcc catcatccac
      181 ctggataccg tttttcaacg gtatgacgga cacagtcggt cgccctggag gaccgccggc
      241 gcggcgatga cgcaatttca ctgcggctaa acgcgaggga tttcaaccgt tgccgaaagg
      301 gaataaaagg agcgaatctc atgccggatt tcaagctcat ttccgccgat agtcatgtca
      361 acgaaccgcc cgccgcttgg gagcgggtgc aaaaagagta cggcgagcgc gccccgaaag
      421 tcgtccgcga cccggctggc aagccgaagg gaacctggct catcatcgac ggcctgccgc
      481 cggtcggcct ttcgcactat tccaaaggct tggccgtcgg caagaaccgc ggcatcagtg
      541 aagtcgagca ggaaaagcat ttcgcgacca ttcgcttcaa cgaaaccttt cgctatgagg
      601 actaccccgg cggctgggag ccgagcgcgc gcttgcaaga tcaggacgcc gacggcgtcg
      661 aggccgaggt gctgttttcc agcgcagtgc gccagctcta cagcatcgtc gacgaaccgt
      721 ttcagcgggc gatctttcac tcctacaacg catggctgca cgagttctgt agtggcaatc
      781 cgaaccggct gctcggtctc gcgctgctgc cgatcttgga catggaacac accgtggcgg
      841 atatttatca ctacgccaag ttgggttttc gcggcgtgca gattccgacg cggatcaaag
      901 acagcggtta ttacgaagcg aaatacgagc ccatgtggcg agccctcgaa gagaccggca
      961 tgatcgtcaa cgtccacacc agcgtcaccc agggcatcgc gcgcactcac tatgaaggac
     1021 cgagggaaca agacccggtc aaagagccca tcggtttcgc ccgcaaacag gtgccggctc
     1081 aacaattcat cggcaatatg attttgtcgg gcaacttcga ccgtcacccg aagctaagag
     1141 tggtctgcgc cgagttcgat atcggctggg tggccaatat ggtccagcag gtcgactcct
     1201 ggttcgggcg cgccagcacc ttcgacgccg accgtaactt gaatcaacgc ccgcccagcg
     1261 aatattttaa atcgaatatc tacttcacct accaagacga tcgcgccggc gtgctgacga
     1321 ctccggttta cggcgagaat aattttctct gggccagcga ctatccccat ggcgtgacca
     1381 cctggccgtt ctcgaaagag gccgtcgatc gcaactgcga aggcatcgac ccaaagatca
     1441 aacgccaact cggccggaac aacgcagcca agctctacgg cttgccggta taatcaagga
     1501 aagtcgacgg aaagtaaaaa tcgcgcactg attaggcagt gactttggtg tgggacccca
     1561 tcctgacaga taaactcaaa tagagcgcca gcttcggcaa cggcgccaaa atcccagctt
     1621 gaacatgatc catatggaaa tcaccccatt tcgtgaagta tcaatcggtc atcggcgggc
     1681 cgtttcgccc ccgagacgtg ttcacttctc ctcgcgctt
//
LOCUS       DATIRS010000197         4227 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1883195, whole genome shotgun sequence.
ACCESSION   DATIRS010000197 DATIRS010000000
VERSION     DATIRS010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4227)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4227)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4227
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1883195"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(68..457)
                     /locus_tag="VLM90_02480"
     CDS             complement(68..457)
                     /locus_tag="VLM90_02480"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSQ11847.1"
                     /translation="MPIEVIDMVDFAHQEKKRKEIFNTPRFHAWMHYYKPGHKDDMHC
                     HNADQTFYVIDGECTMRFPDGGKAVLTPGMAATITGGSFYQLENASDKPMIMMGNRSG
                     PSENIQIIDYVTRKDVRQKVQQESATS"
     gene            complement(631..1011)
                     /locus_tag="VLM90_02485"
     CDS             complement(631..1011)
                     /locus_tag="VLM90_02485"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HSQ11848.1"
                     /translation="MAKRESIHIPGMEHGAPIPNGVVIGNMVFSSAIGGKDAKTGVMS
                     DDPDEQAEAMFRNLRLFMETVGGSPDNIAYMKVYLKDEKYRDNVNGPWEKMFPDAHDR
                     PARHALKVDLRGKNLFQIEVTAVL"
     gene            complement(1150..1446)
                     /locus_tag="VLM90_02490"
     CDS             complement(1150..1446)
                     /locus_tag="VLM90_02490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11849.1"
                     /translation="MSEFFASENIDHDQLCGHSMAGKVALQRAADNASSIHALVVVDI
                     APKTTPTARTPETFRNRRYASSGLPISPAVRMHGSIGASAWKRLSQFMMRSPKY"
     gene            complement(1624..3189)
                     /locus_tag="VLM90_02495"
     CDS             complement(1624..3189)
                     /locus_tag="VLM90_02495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11850.1"
                     /translation="MESMFLWIVLFSGATVLLLGLFLVASEKELKKKRGEINDLVTRL
                     DGARTASAQASGEGGGNGAEVTGLRAKNQELKKEMALLQDDLDAAHRAIDELRSNQPV
                     AANGAALGEIAQLRNANSQLDAQVEELRRQLEASAAQPETASAADRGASERQTQLENA
                     LIDLKQQLEKSQTQVRQLENSPTPVVDASASEASHQEESQRLQARIAQLEKDLSAGAE
                     ITRELDTLQRRIRESEKLESELRESLRRREEEIPLWQERIAASEEIKKRLLSLQPVYD
                     QLVAKQSSLIDHQRAYHGELKSFAQFLSASHDGTIAAPTLFDLQSEQETAAPAALLHM
                     AASGNGRDVHHAATASVPTAPVNEELMPPAKRGLGIFHALIALVVCGAIAALFWSQSG
                     EQPVIHAAKPLTLAGPEKKAAPTPAQLKRAPAGEAVASATFVGKANETAAAQPARQTK
                     LPSEAAAGTYEVTRSTRVFAAPTEFAQQLGEIEPGLKVNVVNARDGWLEIHSKHGRPP
                     GYIRGDAVARVGG"
     gene            3508..>4227
                     /locus_tag="VLM90_02500"
     CDS             3508..>4227
                     /locus_tag="VLM90_02500"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ11851.1"
                     /translation="MIAQSQTATPPKNLSIAEERAILTVTCLAAFLFFNSFGSISVAL
                     PAIQKQFGNSLSEIQWVTLMGVVTISSLSFCFGRAGGILGQRRLYKIGVALYAAGAGL
                     GALAMSFPQLLIARAVMAVGLAMALPMSTALLAGSFAAARRGQVLGTFASAIAVGRMS
                     GPTVGGLLLQMGGWTWIFWMNFIVGLAVTLAVVKIFRGAGEQRPEQFDSWGSLALLLC
                     YPSLLIGLTFGARLGWSSLPVI"
BASE COUNT          734 a         1177 c         1298 g         1018 t
ORIGIN      
        1 ggtcgaggcg aaccggatcg actggaacca ttggaacagt tggaacttat ggaaccgaat
       61 gcgctaccta gctagtggca ctttcttgct ggactttctg ccggacatct ttgcgcgtga
      121 cgtaatcgat gatttggata ttctccgatg gaccggagcg gttgcccatc atgatcatcg
      181 gtttgtcgct ggcattttcc aactgataga acgagccgcc ggtgatggtc gcggccatgc
      241 cgggggtgag cacggccttg ccgccgtcgg ggaagcgcat ggtgcactcg ccgtcgatga
      301 cgtaaaacgt ctgatcggcg ttgtggcagt gcatgtcgtc tttatgtccg ggtttgtaat
      361 agtgcatcca ggcgtggaag cgcggcgtgt tgaagatctc cttgcgcttt ttctcctgat
      421 gggcgaaatc gaccatgtcg atgacttcga tgggcataac ctatcctcct aatgttttta
      481 gaacttgcaa ctcgttgtgt tgtgcggagc gcacgttcaa accgttcaag cagttcaagt
      541 cgttcaaacc gtctgacaat ctcccgattc cgatatcgtt ttgaacgtct tgaacgattg
      601 gaacaacttg aacggcgcgc gcagcgcgcg ctaaagcacc gcggtcactt cgatttgaaa
      661 caaattcttg ccgcgcaggt cgactttgag cgcgtggcgg gccgggcggt cgtgcgcgtc
      721 gggaaacatt ttctcccagg ggccgttgac gttgtcgcgg tatttttcat ctttcaaata
      781 gactttcatg taagcgatgt tgtcgggcga gccgccgacc gtttccatga aaagtcgtaa
      841 attacggaac atcgcttcgg cctgttcgtc gggatcgtcc gacatcacgc cggtcttggc
      901 gtccttgccg ccgatcgccg atgagaaaac catgttgccg attaccacgc cgttggggat
      961 cggcgcgcca tgttccatcc cgggaatatg aatgctttcg cgttttgcca tacttcacct
     1021 ccttgtccga cgcgttgcct ttctcatagc acggcgccga atgtcggtct accgcgccgt
     1081 catcggtaat gaaaattggc cgacccgctc gaatgaagca agtccgggca gagacggtgc
     1141 gatcggcgct caatacttcg gtgagcgcat cataaattgc gataacctct tccaagccga
     1201 tgcgccaatg gaaccatgca tccgtaccgc gggcgagatt ggtaatccag aactggcgta
     1261 gcgtcggttg cggaaggttt ccggcgtgcg cgcggtcggc gtcgtcttgg gcgcgatgtc
     1321 gactacgacc agcgcatgga tggaactggc gttgtccgcg gcgcgttgca gggccacctt
     1381 gccggccatg gagtggccgc atagttggtc gtgatcgatg ttctcgctgg caaaaaattc
     1441 actcacatcc ttcgccatgg cgcatgttgc agcaccggat tatgcggtaa agcgcttcgc
     1501 gaggcgcttt aagttcgacg agagtagcga aggaatcgtt gaggagggtg gtctaacaac
     1561 gcgctggcga tcgcaatggc gagtaccgct agtgtatgtc ggttgccgtg cagcgagctg
     1621 tgatcagccg ccgactcgcg ccacggcgtc gccgcggatg tatcctggcg gccggccatg
     1681 tttggagtgg atctccagcc atccatcgcg ggcgttgacg acgtttactt taaggccggg
     1741 ttcgatctcg cccagttgct gggcaaactc tgtaggcgcg gcaaagaccc gggtgctgcg
     1801 agtgacttcg taggtgcccg cggctgcctc cgacggtaat ttggtttgtc ttgccggttg
     1861 cgccgccgcg gtctcgttgg ccttgccgac gaatgtagcc gaagcgaccg cttcgccagc
     1921 gggcgcgcgc ttcagttggg ccggcgtcgg cgcggctttt ttctccggac cggctaacgt
     1981 caacggtttg gcggcgtgga taaccggctg ctcgccgctc tgactccaga acagcgccgc
     2041 tatggccccg cacaccacca gggcaatcaa agcgtggaaa ataccgagac cacgcttggc
     2101 cgggggcatt aattcttcgt tgacgggggc agtagggacc gatgccgtcg cggcatggtg
     2161 gacatcgcgg ccgttgcctg acgccgccat gtgcagcaac gctgccgggg cggccgtttc
     2221 ctgctcggat tggagatcga ataatgtcgg cgcggctatg gtgccgtcgt gggacgccga
     2281 gagaaattgc gcgaaggatt ttagctcgcc atgataggcg cgttgatggt cgatcagcga
     2341 gctttgtttg gcgaccagct gatcgtaaac cggctgcagg gagagcaggc gcttcttgat
     2401 ttcttcgctg gcggcgatcc gctcttgcca aagaggaatc tcttcctcgc gccgccgcag
     2461 tgactcgcgc agctcgcttt ccagcttctc cgattcgcgg atgcgccgct gcagggtgtc
     2521 gagttcgcgg gtaatttcgg cgccggcgct caggtctttt tccaactggg cgattctcgc
     2581 ctggagcctt tggctttctt cctggtggct ggcttcgctg gcgctcgcat cgaccacggg
     2641 cgtaggcgag ttttccagct gacgaacttg tgtctggctt ttttccaatt gctgtttcaa
     2701 atcgatgagc gcattttcca actgcgtctg tcgttcgctg gcgccgcggt cggctgcgct
     2761 ggcagtttcg ggctgcgctg cgctcgcttc aagctggcgg cgcagctctt cgacctgagc
     2821 gtcgagttgg ctgttggcgt tgcgcaactg ggcgatttct ccgagcgccg caccgtttgc
     2881 tgccaccggc tgattggagc gtagctcgtc gatggcccgg tgggcggcat ccaaatcgtc
     2941 ttgcaacaag gccatttctt ttttcagttc ttggtttttg gcgcggaggc cggtgacctc
     3001 ggcaccgttg ccgccgcctt cgccgctggc ctgggcggac gctgtccgag cgccatcgag
     3061 ccgggtcacc agatcattta tttcgccgcg ttttttcttg agctctttct cggacgcaac
     3121 caagaaaagg ccgagcaaca gtaccgtcgc tccagaaaac aatacgatcc agaggaacat
     3181 gctctccata gtgatctccc gtcgagtttg aggctgaatt tgatgactca ataacgctaa
     3241 acccatgcca cttgacgcaa ggctagctac atagagacaa gcaagggatt tctagcgatc
     3301 attagatact ttgccggaca gttttccggg tattccggtt gagcagggct gcacaaattg
     3361 gtgaatcgct acgaaaactg tttagccatg tttgcgttgc cagcgacagg agcactggtt
     3421 cccaggaaaa aatctcgcat ggtttggcag ttcgctggcg ctcggacttg agttgggcta
     3481 agaaaaatta cctcaagacc ttcttctatg atcgcgcaaa gtcaaaccgc cacgccgcca
     3541 aagaatctat ccatcgccga agagcgggcg atcctcacgg tgacctgtct ggcggcgttt
     3601 ctattcttca acagtttcgg cagcatcagt gtcgccctac cggcgattca gaaacaattt
     3661 ggcaatagtt tgtcggagat ccagtgggtc acgctgatgg gcgtggtgac gatctccagc
     3721 ttgtcgttct gttttggccg tgctggcggc attctcggcc agcgccggct ctacaagatc
     3781 ggcgtggcgc tttacgccgc gggcgccggc ttgggcgcgc tggcgatgtc ctttccacaa
     3841 ctattgatcg cgcgggcggt gatggcggtg ggactggcga tggcgttgcc gatgtcgacc
     3901 gctttgttgg ccggcagttt cgccgccgcc cggcgcggcc aggttctcgg cacctttgct
     3961 tcggccatcg ccgtcgggcg catgtctggg ccgaccgtcg gcggcttgct cttacaaatg
     4021 ggcggctgga cctggatctt ctggatgaat tttatcgtcg gcttggcggt gacgctggcg
     4081 gtggtgaaaa tctttcgcgg cgccggcgag caacggccgg agcaattcga cagctggggc
     4141 tccttggcct tactgctttg ctatccgtcg ctgttgatcg gcttgacttt tggcgcccgc
     4201 ctcggttgga gttcgttgcc ggtgatc
//
LOCUS       DATIRS010000198         1542 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_703766, whole genome shotgun sequence.
ACCESSION   DATIRS010000198 DATIRS010000000
VERSION     DATIRS010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1542
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_703766"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..663
                     /gene="lpxD"
                     /locus_tag="VLM90_02505"
     CDS             <1..663
                     /gene="lpxD"
                     /locus_tag="VLM90_02505"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: protein motif:HMM:NF002060.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HSQ11852.1"
                     /translation="GQRVSVGEGVVIHAGCCIGDDVSIGAGSVLYPRVTIYHGCRVGR
                     RAILHSGAVIGADGFGFAPEGKSWIKIPQIGGVTIGDDVEIGANTTVDRGALDDTVIG
                     DGCKIDNLVQIAHNCNIGANSVLAGCAGLAGSVTLGEQCIVGGGGMISGHVTMAPGTT
                     LSGGSLVMKNITHAGRYTSVFPLDTHDEWLRNASHIRRLSRLAQRISELEKKLKQIQI
                     ED"
     gene            668..1102
                     /gene="fabZ"
                     /locus_tag="VLM90_02510"
     CDS             668..1102
                     /gene="fabZ"
                     /locus_tag="VLM90_02510"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: protein motif:HMM:TIGR01750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019171 -
                     (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HSQ11853.1"
                     /translation="MDIMEVLEHLPQRYPFLLVDRVVAIEPGKSIHAYKNVSINEPHF
                     VGHFPNYPVMPGVLIMEALAQAAGILAFKTAGEKPTPNSLFFFAGIDEARFKKPVMPG
                     DQLHLHVEVERHMRGVWKFKAEARVDGQLVAEARLMSAKRDI"
     gene            1104..>1542
                     /gene="lpxA"
                     /locus_tag="VLM90_02515"
     CDS             1104..>1542
                     /gene="lpxA"
                     /locus_tag="VLM90_02515"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: protein motif:HMM:NF003657.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008780 -
                     acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine
                     O-acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HSQ11854.1"
                     /translation="MIHPTAIVDPGARIGANVAIGPYSIIGPDVEIGDNTEVGPHVVI
                     KGHTRIGRDNHIFQFCSLGEIPQDKKYAGEPTRLEIGDGHTIREFCTFNCGTAQDAGV
                     TRLGHDNWIMAYVHLAHDCQIGEHTIFANNAQLAGHVHVGDHAI"
BASE COUNT          313 a          464 c          474 g          291 t
ORIGIN      
        1 ggccagcggg tcagtgtcgg cgagggcgtc gtcattcatg ccggttgctg tatcggtgac
       61 gatgtaagca tcggcgccgg cagtgtgctc tatccgcggg tgacgatcta tcacggctgc
      121 cgggtcggtc ggcgcgccat cctgcattcg ggcgcggtga tcggcgccga cggcttcggt
      181 tttgcgccgg aaggaaaaag ctggatcaag attccgcaga tcggcggcgt caccatcggc
      241 gacgacgtcg aaattggcgc caatacgaca gtcgaccgcg gcgcgctgga cgataccgtg
      301 atcggtgacg gctgcaagat cgataacctc gtgcagatcg ctcacaattg caacatcggg
      361 gcgaacagcg tgctggccgg ctgtgccggc cttgccggca gcgtgacgct cggcgagcag
      421 tgcatcgtgg gcggtggcgg catgatctcc ggccatgtga ccatggcgcc gggcacgacg
      481 ctttcggggg ggtcgctggt gatgaagaac attacccatg ccgggcgtta taccagcgta
      541 tttccactcg acacgcacga tgaatggttg cgcaacgctt cgcatatccg ccgcctctca
      601 cgcctcgcgc agcgtatttc agaacttgag aaaaagctta aacaaataca aatagaggat
      661 tgattaaatg gatataatgg aagttcttga gcatctcccg cagcgctatc ctttcctgct
      721 ggtcgaccgt gtcgtcgcga tcgaacctgg caagtcgatc catgcctaca agaacgtgag
      781 catcaacgaa ccgcattttg tcgggcattt cccgaactat ccggtgatgc ctggcgtgct
      841 gatcatggaa gcgctggcgc aggcggcggg tatcctcgcc ttcaagaccg ccggcgagaa
      901 gccgaccccg aacagccttt tctttttcgc cggcatcgac gaagcgcgct tcaagaagcc
      961 ggtcatgccg ggcgaccagt tgcacctgca cgtcgaggtc gagcgccaca tgcgcggggt
     1021 ctggaaattc aaggccgagg cgcgcgtcga tggacaactg gtggccgaag ccagattgat
     1081 gtcggccaag cgggatatct gacatgatcc accccaccgc catcgtcgat ccgggtgccc
     1141 ggatcggcgc caacgtcgcg atcggcccct actcgatcat cggtccggat gtcgagatcg
     1201 gcgacaacac cgaagtcggc ccgcatgtag tgatcaaggg ccatacgcgg atcggccgtg
     1261 acaatcacat tttccagttc tgctcgctcg gtgaaatccc gcaggacaag aaatacgccg
     1321 gcgagccgac gcggctggag atcggcgacg gacataccat tcgcgagttc tgcaccttca
     1381 actgcggcac cgcgcaggat gccggcgtca cccgtctggg tcacgacaac tggatcatgg
     1441 cctacgtgca tctggcgcat gactgccaga tcggcgaaca cacgattttt gccaacaacg
     1501 cccagctcgc cggtcacgtg cacgtcgggg atcacgccat ac
//
LOCUS       DATIRS010000199         2670 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_408801, whole genome shotgun sequence.
ACCESSION   DATIRS010000199 DATIRS010000000
VERSION     DATIRS010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2670
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_408801"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1141)
                     /locus_tag="VLM90_02520"
     CDS             complement(<1..1141)
                     /locus_tag="VLM90_02520"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSQ11855.1"
                     /translation="MLTAEENEILTKVGPGTPAGELLRRYWHPVAIAADLTVENPTKF
                     LRILGEDLVLFQTTGGEVGLLHDRCAHRGVSLSYGRVEERGLACAYHGWLYDIEGHCL
                     ETPAEPANSKFCLTVKQKAYPVQKLAGLYWAYFGPLPAPVMPKYDVWARTDGWHWLRA
                     LPQLDCNWLQAMENSVDTAHLHILHQELVTDGFNVESTTRGTIDNLVDYGITEFTHGF
                     IKRRVFKDGKIEEHPLLFPTVLRQANRTQIRVPIDDTHTWVVYVHFVPDSAETRPAND
                     EVPVNYRKPFKNPLGVRHPDTKFRLNEVDAQDFMAWETQGPVHDRTRERLAVSDHGVV
                     MYREMLLREIKKVQQGLEPMNVFRDPNHPIIDTQMDRSLEVGKAGS"
     gene            complement(1218..2330)
                     /locus_tag="VLM90_02525"
     CDS             complement(1218..2330)
                     /locus_tag="VLM90_02525"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ11856.1"
                     /translation="MYGLILCLSSNGFSHAAESKPAWQAEWERTVKAAEEEGQLTVYI
                     AGYGALIDSGVFQKAYPKIKVTSVTGSGTQLAPRIVAERRAEKYLADVYSGGGGSLYQ
                     SLYLGKMLDPLKPALILPEVIDPTKWWEGKHKFIDPEERYIIVYEGNVAAGASPAYNT
                     NLINPKDYKSMWDLLNPKLKGKIVAPDIRRVRGTGPSFQFLYYHADLGPEFLRRFYGE
                     MEVTVTADLRQTVDWLAAGKFALSMPTQSSATAKAKAQGLPVDEFAPHHFKEGASLSG
                     AFGQLALMNRAPHPNAAKVFVNWLLSRDGQSAFQRVISTPGEAKNSRRIDVPKDHIPA
                     AERRLDGGKYFDPDDLGTRDITPVTKLMDEIFAGKK"
     gene            complement(2406..>2670)
                     /locus_tag="VLM90_02530"
     CDS             complement(2406..>2670)
                     /locus_tag="VLM90_02530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11857.1"
                     /translation="CQKGDIRQTPDGLKIYGESEQREINLPAGSRGREAEVEELYDAV
                     VKGRPVFHGGRWGAATLEVCLSMLESAKQRKEIMLSHQVPSPE"
BASE COUNT          549 a          832 c          716 g          573 t
ORIGIN      
        1 cggaacccgc tttacccact tccagggaac gatccatttg ggtgtcgatg atcggatgat
       61 tgggatcgcg gaagacgttc atcggctcca gaccctgctg cactttcttg atttcacgca
      121 gcagcatttc acggtacatc accacgccat gatccgacac ggccaagcgc tcgcgggtgc
      181 ggtcatgaac cggcccctgg gtttcccaag ccatgaaatc ctgggcgtcg acttcattga
      241 ggcgaaactt tgtgtcggga tggcgcacgc ccagtggatt tttgaacggc ttgcgatagt
      301 tgaccggcac ttcgtcgttg gccggacggg tctccgctga atccggcaca aagtgaacat
      361 aaacgaccca agtgtgcgtg tcgtcgatgg gcacgcggat ctgcgtgcga ttggcctggc
      421 gcaatacggt cggaaacagc agcggatgtt cctctatctt gccatccttg aaaacccgcc
      481 gcttgataaa gccgtgggta aattccgtta ttccgtaatc gaccagattg tcgatggtac
      541 cgcgggtcgt gctctcgaca ttgaaaccat ctgtgacaag ttcctggtga agtatatgca
      601 gatgggccgt gtcgacagaa ttttccatcg cttgcagcca attgcagtcg agctgcggca
      661 aggcacgcag ccaatgccag ccgtcggtgc gcgcccaaac atcgtatttg ggcatcaccg
      721 gcgccggcag cgggccgaaa taagcccagt agagtccggc aagtttctgc accggatagg
      781 ccttctgttt caccgtgagg cagaacttac tgtttgccgg ttccgccggc gtctccaaac
      841 agtggccctc gatatcgtaa agccagccat ggtacgcgca ggccaggccg cgttcctcga
      901 cccggccgta ggaaagcgac acaccgcgat gggcgcagcg atcgtgcaaa agcccgacct
      961 cgccgccggt ggtttggaac aacaccaaat cctcgccgag gatgcgcaga aacttggtcg
     1021 gattttccac cgtcaagtcc gccgcaatcg ccaccggatg ccaatagcgc cgcagcaatt
     1081 cccccgccgg cgtgcccgga ccgactttgg tcaggatttc attttcttca gcagtcaaca
     1141 ttttctacta ccccttgaac atcgacgaac agacacgccg tgctcgctct ccaatcctct
     1201 atcctcgacg gtctcagtca ttttttaccg gcaaaaatct catccattaa cttggtcact
     1261 ggtgtgatat cccgcgtgcc caggtcgtcg gggtcgaaat acttgccacc gtcaaggcgc
     1321 cgctccgccg ccggaatatg atccttgggc acatcgatgc gccgggaatt tttcgcttcc
     1381 cccggcgtgc taatcacgcg ctgaaaggcg ctctgcccgt cgcgcgacag cagccaatta
     1441 acaaacacct tggccgcgtt gggatggggc gcgcggttca tcaacgctag ttggccgaac
     1501 gcccctgaga ggctggcgcc ctccttgaag tgatggggag cgaattcatc caccggcaat
     1561 ccctgcgcct tggctttggc cgtggcagaa ctctgcgtcg gcatcgacaa tgcgaacttg
     1621 cccgccgcca gccaatccac cgtctggcgc aggtcggcgg tcacagtgac ctccatctcg
     1681 ccgtaaaaac ggcgcaggaa ctcagggccg aggtcggcat gatagtaaag aaattgaaac
     1741 gatggtccgg taccgcgcac gcgccggatg tccggggcaa cgatcttgcc ctttagtttg
     1801 ggattgagaa gatcccacat cgatttgtag tctttgggat tgatcagatt ggtgttgtac
     1861 gccggactcg cccccgccgc cacgttgcct tcataaacga taatgtaacg ttcctcggga
     1921 tcaataaatt tatgcttgcc ctcccaccac ttggtgggat cgatgacttc cggcaaaatc
     1981 agcgccggct tgagcggatc gagcatcttg ccgagataga gactttgata gagcgaccct
     2041 ccgccgccgc tgtaaacgtc ggcgagatac ttttcagcgc gccgctcggc gacgatgcgc
     2101 ggcgcgagct gcgtgcctga gccggtgacg ctggtaacct tgattttagg ataagccttc
     2161 tgaaacaccc ccgaatcgat caacgcgcca tagccggcga tgtacaccgt caactgccct
     2221 tcttcctccg cagccttgac cgtccgctcc cattccgctt gccaagccgg cttggactcg
     2281 gccgcgtggg aaaagccgtt tgacgacaaa cacagaatga gcccgtacaa agctaaccga
     2341 tggcgcatgt agagtctctc cgattccgac cttgaacttt tgaacccttg aaccttgaac
     2401 aaattttact ccggactcgg cacctgatgc gacagcatga tctctttgcg ctgctttgcc
     2461 gactcgagca tcgacaggca aacttccaag gtcgccgcgc cccagcggcc gccgtgaaac
     2521 accggccgcc ctttcaccac cgcgtcgtac aattcttcaa cttccgcctc gcggccgcgg
     2581 ctgcccgccg gcaaattaat ctcacgctgc tcgctctcgc cgtagatctt taagccatcc
     2641 ggcgtctggc gaatatcgcc cttctgacag
//
LOCUS       DATIRS010000200         2012 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_506632, whole genome shotgun sequence.
ACCESSION   DATIRS010000200 DATIRS010000000
VERSION     DATIRS010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2012
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_506632"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(223..447)
                     /locus_tag="VLM90_02535"
     CDS             complement(223..447)
                     /locus_tag="VLM90_02535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11858.1"
                     /translation="MKPSLAIILILPGAMVIYSGCDSKKDPVSSGRETVKEVVTQPFN
                     TLDGAKESLQKNEDKSKAAITDMEKEFKQP"
     gene            complement(444..1151)
                     /locus_tag="VLM90_02540"
     CDS             complement(444..1151)
                     /locus_tag="VLM90_02540"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: protein motif:HMM:NF013468.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HSQ11859.1"
                     /translation="MPKSPPSYPSSKRRWPPVSKSETENSRAKEARAEAVSVSIAALK
                     RGEVIVFPTETLYGLGADALDAAAVEKVFQLKDRDADSPIPVLVADREMLSRLVAEVP
                     PLAETLIACFWPGPLTIVLPARSAIPRPLVNAKGGVGVRLSSQSIAAELIEALGHPLT
                     ATSANPSGKAPARTLKEAKKYFAGRLDIFIDGGELTSRTGSTVVEIIGESLRIIRVGD
                     ISKPELEAALGLGRILP"
     gene            complement(1051..1566)
                     /gene="purE"
                     /locus_tag="VLM90_02545"
     CDS             complement(1051..1566)
                     /gene="purE"
                     /locus_tag="VLM90_02545"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR01162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HSQ11860.1"
                     /translation="MATAQPKVGILMGSDSDLEVMREAEKRLDSFGIPYETRIMSAHR
                     TPEKAAEYAATAEQRGLEVIICGAGAAAHLAGAIAANTTLPVIGIPIDSSSLKGLDAL
                     LATAQMPAGIPVATMAIGKAGAANAGIFAAQIVGRKDAEVSAKLSKFKKEMAAGVEER
                     DRKLQSERSKS"
     gene            complement(1650..>2012)
                     /locus_tag="VLM90_02550"
     CDS             complement(1650..>2012)
                     /locus_tag="VLM90_02550"
                     /inference="COORDINATES: protein motif:HMM:NF014856.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009113 - purine nucleobase biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide synthetase C
                     domain-containing protein"
                     /protein_id="HSQ11861.1"
                     /translation="IPLLEATIDGNLHQVKAEWYEDSAVCVVLSADGYPGIYDKGKEI
                     HGLDKLKDWSNGFVFHAGTTKDDGRWLTNGGRVLGVTARGAKITDAVKEVYRAVSEIY
                     WDGMHYRTDIAQRALNKM"
BASE COUNT          376 a          552 c          603 g          481 t
ORIGIN      
        1 cgcagacctg cgttacctgg tggtgagtac catagccttc cccgacatct gcgagtatcc
       61 cgactccaac caagtcggcg cctacggtac cgcggcggtt ggatcgacgg tgggcttacg
      121 cgcgttatac gtgcgggacc gaaacgtcga attactacga gggggaagac ggcaaggaga
      181 tcgatcggat cttacagtca aagcgccgcg gcgcctagga gatcacggct gtttgaattc
      241 cttttccatg tccgtgatcg cggctttgct cttgtcttcg tttttttgga gcgactcttt
      301 cgcgccgtcg agcgtgttga acggctgcgt gaccacttcc ttgacggttt ctcggccgct
      361 gctgacagga tccttttttg aatcgcagcc agagtagatg accatagcgc cggggagtat
      421 caaaataatt gccaagcttg gtttcatggt aagatcctcc ctaggccgag cgctgcttcg
      481 agttctggtt tgctgatgtc gccgacacgg atgattctga gcgactctcc aattatttca
      541 acgacggtgg aaccggttct tgacgttagc tcgccgccgt cgatgaagat atcgagccgg
      601 ccggcaaaat atttctttgc ttctttgagc gttcgcgccg gagcttttcc cgacgggttc
      661 gcgctggtcg cggtgagcgg atggccgagg gcttcaatca attcggcggc aatggattgg
      721 ctggaaaggc gcacgccgac gccgcctttg gcatttacta gcggtctggg aatagcgctg
      781 cgggcgggaa gaacgatggt caaagggcca ggccagaagc acgcgatcaa tgtttcggcg
      841 agcggtggaa cttcggcgac caatcggctt agcatctcac gatcggcaac gagcacggga
      901 atcggactgt cggcatcgcg atctttgagt tgaaatactt tttcgaccgc tgcggcgtca
      961 agggcatcgg cgcccaagcc gtagagcgtt tcggtgggga atacgatcac ttcgcctcgt
     1021 ttgagcgcag cgatagagac agaaacagct tcagctcttg cttctttcgc tctggagttt
     1081 tcggtctcgc tcttcgacac cggcggccat ctcctttttg aacttggata acttggcgga
     1141 gacttcggca tctttgcgtc ccacgatctg tgcggcaaag atgccggcgt tggcggcgcc
     1201 tgctttcccg atggccatcg tcgcgacggg gatgcccgcc ggcatctgcg cggtagcgag
     1261 cagggcgtcc aagcctttga gactcgaaga atcgatggga atgccgatca ccggtaacgt
     1321 cgtgttggcg gcgatggcgc cggccagatg cgccgcggcg ccagcgccgc agatgatcac
     1381 ctccaagccg cgctgttcgg cggtggcggc gtactccgca gctttctccg gcgtgcggtg
     1441 cgccgacatg atgcgggtct cataggggat accgaaggag tcgagccgct tttccgcttc
     1501 gcgcatgact tcgagatcgg agtcgctgcc cattaagatg ccgactttag gttgtgcggt
     1561 tgccacgata ggttcctccg aaatgattca gtctaacgtc cgggctttgt ggtccagggc
     1621 ttataacacg aaaaactgga gccgagacct tacattttat ttagcgccct ttgggcgatg
     1681 tctgtacgat agtgcatgcc gtcccagtag atttcactga ccgcgcgata gacttctttg
     1741 acggcatcgg tgattttcgc gccgcgcgcg gttacaccta agacgcgtcc tccgttggta
     1801 agccagcggc catcgtcctt ggttgtgccg gcgtggaaca cgaagccgtt ggaccagtct
     1861 ttaagcttat ccaatccgtg aatctctttt cctttgtcat agatgccagg atatccgtcg
     1921 gcgcttagca ccacgcaaac ggcggagtct tcataccatt cagccttaac ctggtggaga
     1981 ttcccgtcga tggttgcttc gagcaagggg at
//
LOCUS       DATIRS010000201         2319 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_113414, whole genome shotgun sequence.
ACCESSION   DATIRS010000201 DATIRS010000000
VERSION     DATIRS010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2319)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2319)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2319
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113414"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1578
                     /locus_tag="VLM90_02555"
     CDS             <1..1578
                     /locus_tag="VLM90_02555"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSQ11862.1"
                     /translation="FMVRHDLKSIFNLPVSKVRLIVPFVGGGYGSKSYTKVEPLVAAC
                     SWKAKRPVKLQLTVEEAMLTTRSDDAYTWMRTAVDKNGKIIARQAKILMNTGAYAENS
                     PLVVEKSTNRCVGPYAIPNVLIENMSLYTNTVPASSYRGFGCAQVTLPGESQIDELAA
                     KIGKDPYQFRLENVAKPGEEFFPGMRPFDGTLKQDLDTAAKAIGWGTPLAKGHGRTVA
                     ISGSDAGAYPLTSTAVRVHADGSATIMTGSTELGQGSHTVLPQIAAEELGIAYDKVNV
                     VSSDTAITPYDRSTGASRTTTLMGSAVQEACQEAIQQMVVMAADVLKVQKEQIETVRG
                     GVRCGEVQLDWSQVISKFYALPDGEVIGRSYIRKSGKFAALPVFWEAAATGVEISVDE
                     DTGKITMEKLATVGDVGLAINPALAEGQDIGAATMGMGIGLFEELVYEGSQLMNGSIL
                     DYRLPRFSDLPKQVELHLVQNRDGVGPYGAKGGGEASLNSMAANIANAVDKAVGVRIR
                     QAPLTPERVWRALKEKK"
     gene            1664..>2319
                     /locus_tag="VLM90_02560"
     CDS             1664..>2319
                     /locus_tag="VLM90_02560"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HSQ11863.1"
                     /translation="MMPLRKFAIHQPNTVAEASQMLAQYGEKGRLYAGGTELLLAMKH
                     DLLRYEHLVDVKTIPDLNKIELKNGALMIGGSATHRAIERSSMVKQSLPVLAEMETKV
                     ANIRVRACGTLGGNLCFAEPHSDPATLLTALGAKAHVQGKAGARTLAMDKLITGAYET
                     SLASDELLVGVEVPVLAKNQRAAYLKFQLKERPTLGLALFLELDGDSIKKAAAVVGSV
                     "
BASE COUNT          532 a          703 c          670 g          414 t
ORIGIN      
        1 ttcatggtgc gccatgattt gaagtcgatt ttcaatctgc cggtgagcaa agtccgcctg
       61 atcgtgcctt ttgtcggcgg cggttacggt agcaagtctt acaccaaagt cgaaccgctg
      121 gtggcagctt gttcgtggaa agccaagcgg ccggtgaaac tgcagctcac cgtcgaagag
      181 gcgatgctga ccacgcgcag cgacgacgcc tacacctgga tgcgcaccgc ggtcgataag
      241 aacggaaaga tcatcgcccg ccaggcgaaa atcttgatga acaccggcgc ctacgcggaa
      301 aatagcccgc tggtggtcga gaagtcgacc aatcgttgcg tcggccccta tgcgatcccc
      361 aatgtcctga tcgagaatat gtcgctctac accaacaccg tgccggcgag ctcctatcgc
      421 ggcttcggtt gcgcccaggt gacgctgccg ggtgaatcgc agatcgacga gctggcggcc
      481 aagatcggta aagatcccta tcagtttcgt ttggagaatg tcgcgaaacc cggggaagag
      541 ttttttcccg gcatgcgccc cttcgacggc acgctcaaac aagatttaga caccgcggcc
      601 aaagcgatcg gctggggcac accgctggca aaaggccatg gccgcacagt tgcgatatcc
      661 ggcagcgacg ccggcgccta tccgctgacc tccaccgcgg tgcgcgtcca tgccgacggt
      721 tcggcgacga tcatgaccgg cagcaccgaa ctgggccagg gcagccacac cgtcctgccg
      781 caaatcgccg ccgaagagct gggcatcgct tatgataaag tcaacgtagt ttcgtccgac
      841 accgcgatca cgccctacga ccgctccacc ggagcgagcc ggaccacgac gctgatgggc
      901 agcgcggtgc aggaagcttg ccaagaggcg atacagcaaa tggtcgtcat ggccgccgac
      961 gtgctcaagg tgcaaaagga acagatcgaa accgttcgcg gcggcgtccg ctgcggcgaa
     1021 gtgcagctcg actggtcgca ggtaatcagc aagttttacg cccttcccga cggcgaagtg
     1081 atcggccgct cctacattcg aaaatccggc aaattcgccg ccctgccggt cttttgggaa
     1141 gccgccgcca ccggcgtgga aatctccgtc gacgaagaca ccggcaaaat caccatggaa
     1201 aagctcgcca ccgtcggcga tgtcggtttg gcgatcaatc cggcgctggc cgaaggccaa
     1261 gacatcggcg ccgcgaccat gggcatgggc atcggcctgt tcgaagagct agtttacgaa
     1321 ggctcgcagt tgatgaacgg ctcgatcctc gactaccgtt tgccgcgctt ctccgattta
     1381 ccgaaacaag tcgagctcca cttggtgcag aatcgcgacg gtgtcggccc ctatggcgcc
     1441 aaaggcggcg gcgaagcgtc gctaaactcg atggccgcca atatcgccaa cgccgtcgac
     1501 aaagccgtcg gcgtgcgtat acgccaagcg ccgctcacac cggaacgagt ctggcgcgcg
     1561 ctgaaagaaa agaaatagaa agggtcgagg atcgaagatt gaggatggcg gataaaaagt
     1621 tgcgatcatc gatcatcgat cctccatttt cgactagact gttatgatgc ccttaagaaa
     1681 atttgccatt catcaaccca acacggtcgc cgaagcgtcg cagatgctcg cccagtacgg
     1741 tgaaaaaggc cggctctacg ccggcggcac cgagctgctg ctcgccatga aacatgacct
     1801 cttgcgttat gagcacttgg tcgatgtcaa aaccattccc gacttgaata agatcgagct
     1861 gaaaaatggc gcgctcatga tcggcggcag cgccacccat cgcgccatcg aacgctcgtc
     1921 catggtcaaa caaagcctgc cggtattggc cgagatggaa accaaggtgg caaacatccg
     1981 cgtgcgcgcc tgcggcaccc tcggcggcaa tctctgcttc gccgagccgc actccgatcc
     2041 agcgacgtta ttaaccgcac tcggcgccaa ggcccatgtt caaggtaaag ccggagcgcg
     2101 aaccctggcg atggataaac tgatcaccgg cgcctatgaa acttccctcg ccagcgatga
     2161 actgttggtc ggcgtcgagg ttccagtgtt ggcaaaaaac cagcgggccg cttatttaaa
     2221 attccagctc aaagagcggc cgacgttggg actagcgctg ttcttagaac tcgacggcga
     2281 cagtatcaaa aaagctgccg ccgtcgtcgg cagcgtcag
//
LOCUS       DATIRS010000202         1734 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1687021, whole genome shotgun sequence.
ACCESSION   DATIRS010000202 DATIRS010000000
VERSION     DATIRS010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1734)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1734)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1734
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1687021"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1156)
                     /locus_tag="VLM90_02565"
     CDS             complement(<1..1156)
                     /locus_tag="VLM90_02565"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HSQ11864.1"
                     /translation="MKAAVLHELNKPMTIDDFEIPGIGPDEVLIKVKACGVCHTDFKV
                     IEGRIPSRVPTIIGHEDSGTIAEVGVSQRGAFKAGDAVIVVTRYRCGHCQYCMAGREN
                     LCRARPAPASLKRTDGREIFRWNVGGFSQYLALPCYMVFKLPEGLSLEEASVVGCRMT
                     TAYNAVKNSAEIKPGDSALVIGCGGVGLNTIQFLRTFGAYPIIAVDLYDHKLEAAKKF
                     GATHVINGAKEDPVKAVRDLTDGGVNKSFEALGNVKTSDQIIQATRPGGTATIIGGLG
                     KVPFTISDGSFTMQEIKIAGVALRRPTDVVEVLNMVRDKRVEVSGLVSKRYGYDQIND
                     AFHDLEAGNNRLEMTSKAVRKSINAHVGYLEQALERINQELDRAIEQSPIW"
     gene            complement(1279..>1734)
                     /locus_tag="VLM90_02570"
     CDS             complement(1279..>1734)
                     /locus_tag="VLM90_02570"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ11865.1"
                     /translation="GWSMEAASTLLGVSAFIGVPARLGAGWLGDLVDKRKLIMCLLLA
                     LSGSVAFMGVSGQAVLFTTCMIIYSLAYGGLASIQEPIRADYFGTKAFATIQGVSRTI
                     TTIGTFMGPLIAGFVHDTTKSYAVAFSIFACSALLSTVCMFFAKKPHNN"
BASE COUNT          352 a          529 c          493 g          360 t
ORIGIN      
        1 tccagatcgg gctttgctca atggctcggt cgagctcttg gttgatgcgt tcgagtgcct
       61 gttcgagata gccgacgtga gcattgatgc tttttctgac cgctttggag gtcatctcca
      121 gccggttgtt cccggcttcg agatcgtgaa acgcatcgtt gatctggtcg tagccataac
      181 gcttcgacac caagcccgac acctcgacac gcttgtcgcg caccatgttg agcacttcga
      241 cgacatcggt gggccggcgc agcgctacgc cggcgatctt gatctcctgc atggtgaagc
      301 tgccgtcgct gatggtgaac ggcactttgc ccaggccgcc gatgatcgtc gccgtgccgc
      361 cggggcgggt cgcttgaatg atttgatccg aggttttgac gttgcccaac gcctcgaagg
      421 atttgttgac gccgccgtcg gtcaagtcgc gcaccgcttt gaccggatct tccttggcgc
      481 cgttgatcac gtgggtggcg ccgaactttt tcgccgcttc gagcttgtgg tcgtagagat
      541 cgacggcgat gatcggatag gcgccgaagg tgcgcagaaa ctgaattgtg ttgaggccga
      601 cgccgccgca gccgatcacc agcgccgaat cgccgggctt gatctccgcg gagtttttca
      661 ccgcattgta cgccgtcgtc atgcggcagc cgaccacgct cgcttcttct agcgacaacc
      721 cttccggcag tttgaagacc atgtagcagg gcagcgcgag atactgtgag aagccgccga
      781 cgttccaacg aaaaatctcc cggccgtcgg tgcgtttcaa cgacgccggc gccggccggg
      841 cgcggcataa attttcccgt cccgccatgc agtattggca atggccgcag cggtagcgcg
      901 tgacgacgat aaccgcatcg ccggctttga acgcgccgcg ctggctcacg ccgacctcgg
      961 cgatggtgcc cgaatcttca tggccgataa tcgtcggcac gcggctggga atccgccctt
     1021 cgatgacttt gaaatcggtg tggcaaaccc cgcaggcttt gactttgatc aaaacttcat
     1081 ccggcccgat ccccggaatc tcgaaatcgt cgatggtcat cggtttattc agttcatgca
     1141 ataccgcagc tttcataaca accatcctcc cgaaggctgg gcgatcctac tacaagcaaa
     1201 tggcgaattg aaaatggata atggataacg aaaacctgcg atccgattcc gaaactatca
     1261 attctccatt atccattctc aattattatg aggctttttc gcgaagaaca tacacaccgt
     1321 cgacaacagc gccgagcagg cgaagatact aaacgccacg gcgtaacttt tagtcgtgtc
     1381 gtggacgaag ccggcgatga gcggccccat gaaggtgccg atggtcgtga tcgtccggct
     1441 gacaccctga atcgtcgcga acgctttggt gccgaagtag tccgcgcgga tcggctcctg
     1501 gatcgacgcc aacccgccgt aagccagcga atagatgatc atgcaggtgg tgaacagcac
     1561 cgcctggccg gacacgccca taaatgccac cgagccgctc agcgccagaa gtaaacacat
     1621 aatcagcttg cgcttgtcga ccagatcgcc gagccagccg gcgccgagcc gggccggcac
     1681 gccgataaac gccgacacgc cgagcagggt gctcgccgcc tccatgctcc agcc
//
LOCUS       DATIRS010000203         2989 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_310545, whole genome shotgun sequence.
ACCESSION   DATIRS010000203 DATIRS010000000
VERSION     DATIRS010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2989)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2989)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2989
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_310545"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            56..283
                     /locus_tag="VLM90_02575"
     CDS             56..283
                     /locus_tag="VLM90_02575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11866.1"
                     /translation="MNVPTHYMDLWRGQRDNSFNRILRNEFAARVCKTGLRLDFTCRN
                     RMATSPWSIQSDLIRRDGRRALALYKARVSD"
     gene            316..1218
                     /locus_tag="VLM90_02580"
     CDS             316..1218
                     /locus_tag="VLM90_02580"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1C family serine protease"
                     /protein_id="HSQ11867.1"
                     /translation="MNGHIGLIHSLVPATVDLQVTIPESHPSARNLGAERVGSGTIIE
                     PSGYILTVHYVTIGAASITVTLPDGEEYPGQVVGQDQESGLSLVKIPGRDLPFLKMAA
                     ADSLALGQEVVMIASSGKVGRRVSGGYVSSMAGYDGEWEYMIDKSIRVTAFNPGFGGG
                     TLANFKGELAGIVSLNLNEVGKFTMAIPVAYYQTYEQELKQHGQVLSRPRRPWVGIYT
                     QGVAGLVVIVNVTGNGPAARSGLKAGDVILSVENNKIRSRQELYQEMWKKRPGERILF
                     RVIRDDEAVDVEVIGGDRADRYRT"
     gene            complement(1215..1682)
                     /locus_tag="VLM90_02585"
     CDS             complement(1215..1682)
                     /locus_tag="VLM90_02585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11868.1"
                     /translation="MNKLVQRVSWSGGAMLTGLLMLACSSVDDKPAAPAPKPAAAAPA
                     AKPPAAAPAPAPAKTEAVKATKTKAVEVEGVISAVGQRTITFQMERKGKVREEVVGVD
                     EKTKIEKAGANVKMSDLATTDKGMISYEPDAYTPALGIKITGKGEIKKVGGDD"
     gene            1838..2266
                     /locus_tag="VLM90_02590"
     CDS             1838..2266
                     /locus_tag="VLM90_02590"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HSQ11869.1"
                     /translation="MTTHVTNITSYRVIYGDTDQMGVVYYANYLRWFERGRSEFLRQI
                     GFPYGDVEAAGYHFPVAEVHCRYAQSARYDDIVEIATTLVDLNRVYLSFEYKISRQAD
                     QLTLATGSTKHACIDREGQLKRIPKMFADAVELAKQNRQD"
     gene            2403..>2989
                     /locus_tag="VLM90_02595"
     CDS             2403..>2989
                     /locus_tag="VLM90_02595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11870.1"
                     /translation="MQSRAKLDPAPRSYPPAVTLVRRAQRHGESIPDLTTAAAIEEWL
                     LSSAIRENDLLGLFHMFVVRLVTAGLPLERVSLHVGTLHPQLIGFGWVWEQSDGLCDE
                     FQVAEAALRSHAYRLNPLYPVIEYGEKVRCRTADPAAIERFPLVRELASQGITDYLVE
                     PIGGGAYHNAASIATKEPSGFTDAQVVALQRLLAL"
BASE COUNT          628 a          887 c          817 g          657 t
ORIGIN      
        1 gggttcatcg gcttgttaat tcatcgctat tttgttaacc attttggttc ggcccatgaa
       61 cgttcccacc cactatatgg acctttggcg cggccagcgc gacaattcct tcaatcgcat
      121 tctgcgtaac gagtttgccg ccagggtttg caagacaggc ctgcggctcg atttcacttg
      181 ccgcaatcgg atggcaacct cgccgtggtc gattcaaagc gacctgatac ggcgcgatgg
      241 ccggcgcgcg ctggctctat acaaagcgag agtttcggac tagcctaccg agcatatcca
      301 gtgaaggagt aaactttgaa cggccatatt ggattgattc attcgctcgt accggcgact
      361 gttgatttac aagtaaccat accggagagc cacccatcgg cgcgcaatct tggcgctgag
      421 cgagtcggtt cgggcaccat catcgagccc agcggctaca ttctcacggt gcactatgtc
      481 accatcggtg ccgcgtcgat caccgtcacc ctacccgacg gtgaagagta cccgggacag
      541 gttgtcggac aagaccaaga gtccgggctg tcgttggtca aaattcccgg acgcgatctg
      601 ccatttctca aaatggcggc ggcggactcg ctggctctcg gccaggaggt ggtcatgatc
      661 gccagcagcg gcaaagtcgg gcggcgcgtc agcggcggct atgtcagctc catggccggt
      721 tacgacggcg aatgggaata catgatcgac aaatcgattc gcgtgaccgc gttcaatccc
      781 gggtttggcg gcggcacttt agccaacttc aagggcgaac tggccggcat tgtctcgctc
      841 aacttgaacg aggtcggcaa gttcaccatg gcgatccccg tcgcctacta ccaaacctac
      901 gaacaggagc taaaacagca tggccaggtg cttagccggc cgcgccggcc ttgggtggga
      961 atctatactc agggggtcgc cggcctggtg gtcatcgtca atgtaaccgg caacggaccg
     1021 gcggccagat ccggcctcaa agccggcgat gtgatcttat cggtggaaaa caacaagatc
     1081 cgttcgcgcc aggagcttta ccaagagatg tggaaaaagc gtccgggaga acggatcttg
     1141 tttcgcgtta tccgcgatga cgaagccgtc gatgtcgaag tgatcggcgg cgaccgcgcc
     1201 gatcgttacc gcacctagtc gtcgccgccg acctttttaa tttcgccctt gccggtaatc
     1261 ttgatgccga gcgccggcgt ataggcgtcc ggttcgtaac tgatcatgcc tttatcggtg
     1321 gtcgccagat cgctcatttt cacgttagcg ccggcttttt cgatcttggt tttctcatcg
     1381 acgccgacca cctcttcgcg cactttacct ttgcgctcca tctggaacgt gatcgtccgt
     1441 tggccgacgg cgctgatcac gccttcaact tcaacggcct ttgtcttggt cgccttaacc
     1501 gcctcggttt ttgccggcgc cggcgctggt gccgccgcag gcggtttcgc cgccggtgcg
     1561 gccgcggccg gttttggtgc tggagcagcc ggtttgtcat ccactgagct gcaagccaac
     1621 attaacaatc ccgtaagcat cgcgccgccg gaccaagata cacgctgaac taacttattc
     1681 attccctttc ctcctgatgc ccaaaaaaac taaaatatcg cgctatataa attgccgcaa
     1741 tttcctcagc taaaacatac ttccgtttag attgtcaagg cgctcaggac aattgcgctt
     1801 tgagaatcgc ggcaaaaaga actaccgtgg tgatctcatg acgacccacg tgacgaatat
     1861 cacaagctat cgcgtaatct acggcgacac cgaccaaatg ggcgtggttt attacgccaa
     1921 ttacctgcga tggttcgaac gcggcagatc agagttcctg cgccagatcg gttttcccta
     1981 cggagatgtc gaagccgccg gataccattt tcccgtcgcc gaagttcact gccgctacgc
     2041 ccagtcggcg cgttacgacg atatcgtcga aatcgccacg acattggtcg acctgaaccg
     2101 agtttatctg tcgtttgagt acaaaatttc ccgccaagcc gaccaactca ccctggccac
     2161 cggatcgacc aaacacgcct gtatcgatcg cgagggccaa ttgaaacgaa ttcccaaaat
     2221 gttcgccgac gcggtcgagc tggcgaagca gaatcgccaa gactagagca aagcagcttt
     2281 ggcggaactc cattccgttg catgcaaccg atggggtcga tgacggtaat tagttcctgc
     2341 cggggataaa acgtaaagtc gcacactcgt tgtcgatttt tgcggttcaa catgaggttc
     2401 tcatgcaatc acgtgcgaaa ctcgatccag ctcccaggtc gtacccgcca gccgtcacgc
     2461 tagtgcgccg cgcccaacgg cacggcgaat ccataccaga cctgaccaca gctgcggcaa
     2521 tcgaggagtg gctgctcagc tctgcgatcc gagagaatga tctgctgggt ctatttcata
     2581 tgttcgtcgt gcgcttggtc acggcgggct taccgctcga acgggtgagc ttgcatgtcg
     2641 gcacgctcca tccgcaactg atcggctttg gctgggtctg ggaacagagc gacggcctgt
     2701 gcgacgaatt tcaggtcgcc gaagcggcgc tacggtccca cgcctaccgc ctcaatccgt
     2761 tgtatcctgt tatcgagtac ggtgaaaagg tccgctgcag aaccgccgat cccgccgcca
     2821 tcgagagatt tccgttagtg cgtgaactcg ccagccaagg cattacggac tatctggtcg
     2881 aaccgatcgg cggcggcgct taccacaatg ccgcgtccat cgcgacgaaa gagcccagcg
     2941 gttttaccga cgcacaggtc gtcgcgttgc agcggctcct cgcattgtt
//
LOCUS       DATIRS010000204         1630 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_900554, whole genome shotgun sequence.
ACCESSION   DATIRS010000204 DATIRS010000000
VERSION     DATIRS010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1630
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_900554"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..>1630)
                     /locus_tag="VLM90_02600"
     CDS             complement(106..>1630)
                     /locus_tag="VLM90_02600"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HSQ11871.1"
                     /translation="DQLNDYMNDTGDLQQAMRRLMQKGIKQGEKQTKGLEDLLSQVAR
                     EMRKLYDEYRLQSAMDEVQEQLDSVVDQEQQTLEQMDQAGDDVQEKKQFLNDLPGKTS
                     EAIDKLTSYRFENTDAEKDFQKLVMQLEQIRKLENWLRREGSLFRGQTPMEFQQSQEL
                     MERMEDLRKLESQLSSMQLKDVDKELLEKLLGGDPKQDFEGVMRMQSLLEEGGYVLEA
                     GDRFELTPKGVRRVVQLALRDIYQQLRRDGMGRHMTRNRGSQEMVLETSRPYVQGDPF
                     HINMIQTLKNALLSGGGVSVRIGPKDFAVYESEYNTRAATVLLLDMSWSMSWEGRFAA
                     AKKVALAMESLVRSLHPRDYFGIVGFFTRAVELKAKDLPQATWNMGDPFTNLQDGLHL
                     ATEMLGKKPSANQQMIVITDGQPTAYCRQGRLYCEWPLSFGGISQRAAEETLKEVERI
                     TRKGITINTFMLDDSPVLRGFVDDLTRINKGRACYTRPDRLGEYLLVDYLSHQRKKV"
BASE COUNT          290 a          489 c          464 g          387 t
ORIGIN      
        1 ggttcaaaag ttcaaggact taaaccgtgc cgcctctacg gacgtcgcgt ccggccttga
       61 accttgaacg cttgaacttt tgaacagtgt aacgcgcgcc gcgtgttaca ctttcttccg
      121 ctgatgcgag agataatcga ccaggagata ttcgccgagg cgatcggggc gggtgtaaca
      181 ggcacggcct ttgttgatgc gggtgagatc gtcgacgaag ccgcgcagga ccgggctgtc
      241 gtcgagcatg aaggtattga tagtgatgcc cttgcgcgtg atccgttcga cttctttcaa
      301 agtttcttcg gcggcgcgct ggctgatgcc gccgaaactg agcggccact cgcagtaaag
      361 ccggccctgg cggcaatacg ccgtcggctg gccgtcggtg atgacgatca tctgctggtt
      421 ggcgctgggt tttttgccga gcatctccgt cgccaggtgc aaaccatcct gcaagttggt
      481 gaagggatcg cccatgttcc aggtggcctg cggcaaatct tttgccttga gctcgacggc
      541 gcgagtgaaa aaaccgacga tgccgaaata atcgcgcgga tgaagcgaac gcaccaggct
      601 ctccatcgcc agcgcgactt ttttcgcggc ggcaaagcgt ccttcccagc tcatcgacca
      661 gctcatgtcc aaaagcagca ccgtcgccgc gcgcgtgttg tactccgact cgtaaaccgc
      721 gaagtccttg ggaccgatcc tgaccgacac gccgccgccg ctgagcagcg cgttcttgag
      781 cgtctggatc atgttgatat gaaacgggtc accttgcaca taaggccggc tggtttcgag
      841 caccatttcc tggctgccgc ggttgcgcgt catatgccgg cccatgccgt cgcgccggag
      901 ctgctgataa atatctctca gagcgagctg gacgacgcgc cgaacgcctt taggggtaag
      961 ctcgaagcgg tcgcccgctt ccagaacata gccgccctct tcgagcagcg actgcatgcg
     1021 catgacgcct tcgaagtcct gcttcgggtc gccgcccaaa agtttctcta gtaattcctt
     1081 atcgacgtct ttcaactgca tgctggagag ctgcgactcc agtttgcgca gatcttccat
     1141 gcgctccatc agctcttgcg actgctggaa ctccatcggc gtctggccgc ggaacagact
     1201 cccctcgcgg cgcagccaat tttccagctt gcggatctgc tccagttgca tgaccagttt
     1261 ttgaaaatct ttttccgcgt cggtgttttc aaagcgatag gaagtgagct tgtcgatggc
     1321 ttcgctggtt ttgccgggca ggtcgttcaa gaactgcttt ttttcctgga cgtcgtcgcc
     1381 cgcctggtcc atctgttcga gcgtctgctg ctcttgatcg accaccgagt cgagctgctc
     1441 ttggacctcg tccatcgcgg actgcaagcg gtactcgtcg tagagcttgc gcatttcgcg
     1501 cgccacttgc gagagcaggt cttccaaccc cttggtctgt ttttcgccct gcttgatgcc
     1561 cttctgcatc aggcggcgca tcgcctgctg caggtcgccc gtgtcgttca tgtagtcgtt
     1621 caactgatcg
//
LOCUS       DATIRS010000205         3018 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1490530, whole genome shotgun sequence.
ACCESSION   DATIRS010000205 DATIRS010000000
VERSION     DATIRS010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3018
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1490530"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..605
                     /locus_tag="VLM90_02605"
     CDS             <1..605
                     /locus_tag="VLM90_02605"
                     /inference="COORDINATES: protein motif:HMM:NF014534.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HPF/RaiA family ribosome-associated protein"
                     /protein_id="HSQ11872.1"
                     /translation="TYRHMEATPAIEENIREKAAKLDTIYDGIMGCRVAVEAPHRHHH
                     KGKAYVVRIDLTVPGGELVINREPKRIVPKKAKAGDEPDNDFAESHEPSKHAAHEDIY
                     VAIRDAFNAAGRKLQDHARRWRGKVKVHEPQPVARIASLLPMEDHGFLLTPDGREVYF
                     HRNSVLAPGFDRLEIGHEVYFAEELGDKGPQASTVRLAGR"
     gene            629..1456
                     /locus_tag="VLM90_02610"
     CDS             629..1456
                     /locus_tag="VLM90_02610"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSQ11873.1"
                     /translation="MFEEVIVCLDGSSLAETILPLARAVTAPTGGKLTLLRVVGDEAE
                     LAAEESYLRDCARQYAAQLSFAISADPAGAIATELKNNPHAIAAITTHGRTAWAEAIL
                     GGVAFQVIRESHRPVLVYRPITKTGDAPKQIDTVVIALNGNALSEKIITYAVPAARSL
                     RAKLLLVQVLPVQSPAALLPDQGKNDISESAYVHSKAAEIKKQYGLDAQWDVLHGDPA
                     EAIWRYVRGTPNTLLAMTTHALPGIERAILGSVAAACVRHAATPLLLYWPKDENRER"
     gene            complement(1574..2953)
                     /locus_tag="VLM90_02615"
     CDS             complement(1574..2953)
                     /locus_tag="VLM90_02615"
                     /inference="COORDINATES: protein motif:HMM:NF014307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HSQ11874.1"
                     /translation="MTTPLAETAYLVAALLFVFGLHQLRAPETARRGVWLAGLAMAIA
                     VAGTLLGNQLVRYDWIIAGVAIGSAVGIAMALFIPMAKMPERIALSHSFGGLAAALVG
                     IAEYARHGGALGAAKIAALGFEVLLGALTFSGSLIAFGKLQGAVAERPLTHRFQNGLN
                     IALLAGALAAIAYLTVHPAARQVFYGMAGGAFVLGVLLVLPIGGADMPVVISLLNSYA
                     GLAAVATGFALSNSVLIVCGALDGASGFFLSLAMSKAMNRSFSNIIFGGFGRESGGGQ
                     AGAAARQSTLGATIGDALIVLTSARSVIVVPGYGMAAARCQHALRELGELLEQRGLTV
                     KYAIHPVAGRMPGHMNVLLAEANVPYDRLYDIDAINNEFATTDVALVVGANDVVNPAA
                     KHDPNSAIYGMPVLDAESARTVIVLKRGMAPGFAKIDNELFSRANTMMLFGDANQTLT
                     ALVKGLKEY"
BASE COUNT          675 a          927 c          878 g          538 t
ORIGIN      
        1 tcacctatcg ccacatggag gcaaccccgg ccatcgaaga aaacattcgc gaaaaggccg
       61 cgaaactcga tacgatctac gacgggatca tgggttgccg ggtggccgtt gaagcgccgc
      121 accgccacca tcacaaaggc aaggcctatg tggtgcgcat cgatctaacc gttcccggcg
      181 gcgaactggt tattaatcga gaaccaaaac gtatagtgcc gaaaaaagct aaggccggcg
      241 acgaaccgga taatgacttc gccgaatcac atgagccgag caaacacgcg gcccacgaag
      301 acatctatgt cgccatccgc gacgccttca acgctgctgg ccgaaagctt caggatcatg
      361 cgcggcgctg gcgcggcaag gtaaaagtcc atgaaccgca gccggtcgct cggatcgcca
      421 gcctgttgcc gatggaagat catggatttc tcctaacgcc cgacggacgc gaagtgtatt
      481 ttcacaggaa cagtgtgctc gcgccgggat tcgatcgtct agagattggc cacgaagttt
      541 attttgccga ggaactcggc gacaaagggc cgcaggctag caccgtgcgg ttggcgggta
      601 gatgattcca taacggctgg agttattcat gttcgaagaa gtcatcgtct gcctcgacgg
      661 ctcatccctg gcggaaacca ttctgcccct ggcgcgcgcc gtgaccgcac caaccggcgg
      721 caagctaacc ctcctgcgag tcgtcggcga tgaagctgag ctcgccgccg aggaatctta
      781 tttacgcgac tgcgcgcgcc agtacgccgc gcagctgagc ttcgccatct cggcggaccc
      841 ggccggtgcc attgccactg agctaaaaaa taatccccat gccatcgcgg caatcaccac
      901 acatggccgg accgcctggg ccgaagcgat tttaggtggc gtggcgttcc aggtgattcg
      961 cgaatcccac cggccggtgc tggtctaccg tccgataaca aagactggcg atgcaccgaa
     1021 gcagatcgac accgtcgtta tcgccctcaa tggcaacgcc ctctcggaaa agatcatcac
     1081 ctacgccgtc ccagcggctc ggtcgttgag agcgaagctg ctgttagttc aagttctgcc
     1141 ggtgcagtca ccggcagcgc tgctgccgga ccaggggaaa aacgatatca gcgagtcggc
     1201 gtatgttcat agcaaagcag cggagatcaa aaaacagtat ggcttggacg ctcagtggga
     1261 cgtgctccat ggcgatccgg cagaggcgat ctggcgctac gtcaggggca ctcccaatac
     1321 gttgctggcg atgaccaccc acgcactccc tggcatcgag cgcgccatcc tcggcagcgt
     1381 cgccgccgct tgcgtgcgcc acgccgctac ccccctgctg ctctactggc caaaagacga
     1441 gaatagagag agatagagaa ttgagataga gaccgaccaa ctccaccact cactctaata
     1501 tagcgttagg tcgctcgtct ctgtctctgt ctctgtctct gtctctgtct ctgtctctgt
     1561 ctctgtctct gtctcaatac tctttcaatc ccttgaccag tgccgtcagt gtctggttgg
     1621 cgtcgccgaa gagcatcatg gtattggctc gggagaataa ttcgttgtcg atcttggcga
     1681 agccgggggc catgccgcgt ttgagcacga tgaccgtgcg tgccgattcg gcatcgagta
     1741 ccggcatgcc gtagatcgca ctattggggt catgcttggc tgccgggttg actacgtcat
     1801 tggcaccgac gaccagggcg acatcggtgg tggcgaattc attgttgatc gcgtcgatgt
     1861 cgtagagccg gtcatagggc acgttggcct cggcgagcag cacattcata tggccgggca
     1921 tccggccggc cacgggatga attgcgtatt taaccgtgag accgcgctgc tccaataatt
     1981 cacccaactc acgcaaggca tgctgacagc gcgccgccgc catgccgtaa ccgggaacga
     2041 cgatcaccga tctggcgctg gtgagaacaa tcaacgcatc accgatggtg gcgccgagcg
     2101 tagactgacg cgccgccgca ccagcttggc cgccgccgct ttcccgtccg aaaccaccaa
     2161 agataatatt gctaaacgac cgattcatcg ccttgctcat ggccagcgaa aggaaaaagc
     2221 ccgacgcacc atcgagggcg ccgcagacga tcaaaacact gttagacaaa gcgaatccgg
     2281 tggccaccgc ggccaggccg gcgtaggaat tcaatagcga tatcaccacc ggcatatcgg
     2341 cgccgccgat aggcagcacc agcaaaaccc ccaacacgaa agcgccaccg gccatgccgt
     2401 aaaatacttg ccgagcggcg gggtgcaccg tcaggtaggc gatggccgcg agcgcgcccg
     2461 ccagcagcgc gatattcagg ccgttctgaa agcggtgcgt caagggccgt tcggcgacgg
     2521 caccttggag tttgccgaag gcgatcaggc taccggaaaa ggttagcgcg ccgagcaaca
     2581 cctcaaaacc gagggcggca atcttcgccg cgccaagcgc gccgccatgg cgcgcatact
     2641 cggcgatccc cactaaggcg gcggccagac cgccaaagga gtgggacagc gcgatccgct
     2701 ccggcatctt ggccatcgga ataaataacg ccatggcgat gccaacggcc gagccgatgg
     2761 cgacgccggc gataatccaa tcgtaacgaa ccagctggtt gccaagtaaa gtaccggcga
     2821 cggcgatcgc catcgccaag ccggcgagcc acacgccgcg ccgggcggtt tccggcgcgc
     2881 gcaattgatg caggccaaag acaaatagca gcgcggcgac gagataagcg gtctccgcca
     2941 atggggtcgt cacgatcgcg gctcaccatg ttttttgaac attttgagca tgcggtcggt
     3001 tattagaaag ccgccgac
//
LOCUS       DATIRS010000206         2483 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1392577, whole genome shotgun sequence.
ACCESSION   DATIRS010000206 DATIRS010000000
VERSION     DATIRS010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2483
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1392577"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(80..1246)
                     /locus_tag="VLM90_02620"
     CDS             complement(80..1246)
                     /locus_tag="VLM90_02620"
                     /inference="COORDINATES: protein motif:HMM:NF024742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ11875.1"
                     /translation="MADTIWTKTFILLCAVQLLGYAQHFMLAPVLPLFLTQLGAPPVV
                     VGIVLACFAVTSVVVRPLVGHWADRWSEAGVMIAGLLFQAVSIFLCFIPFVPAAALAN
                     GLRGIGWAGLNTGGYSLLALISPEKKRGAASGLYSGVQSSAQIFFPPFALWLLYASFG
                     GYRLVFVVTAIFSIAGALTGWAMASSVPPPAKVHGTHKKTDWWREIFHFVEPEIFLPS
                     LLLLWLNLSLPALTNFIILYAKELGIGNFAAYFVVIGATSMLGRPLLGRLSDRIGRAR
                     SIAAGFALQVIALILITIMSNLLGVIVCGAIYMLGNAIGSSTTLALAVERADPQRRGK
                     QMATFSVAYPLSYGVGSLITGSAIDIAGYIGMFLLLAAIQAAGLLFAVGRGAKL"
     gene            complement(1361..>2483)
                     /locus_tag="VLM90_02625"
     CDS             complement(1361..>2483)
                     /locus_tag="VLM90_02625"
                     /inference="COORDINATES: protein motif:HMM:NF024241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ11876.1"
                     /translation="SSQHALLQPTFPLYITSLGGTPFQVGLVIACFAVTSVVFRPIIG
                     GWADQWSEPGVSFCGLTLLALAVLLCLIPLTEATMVANALRGIGWAAMSAAGYSMLAL
                     SAPPQRRGEASGYYSGVQASGTILLPAVALWLIDLPSWAPFGGFRGVFLVAFALAATG
                     AVAAAVLKRHMPPRSQERRAAPSGSWWQEILSVLDREIILASVLSFVSHVTFPAVASF
                     LVLYARELAIDNIGWFYVVSGATSILARPLLGKVSDRVGRGRALLACFILETIALVLL
                     AFATNLFALIISGALYMLGLAMSSSTTLAIAMEQAKPERRGRAMATFSIALPLSNGIG
                     ALICGSLVQWFGFFAMYLVLAALGASGLFITIANRARLK"
BASE COUNT          577 a          703 c          824 g          379 t
ORIGIN      
        1 gaggaattgg agtgctggag tattgagttt tcagagagcc catcactcca ccattccagt
       61 actccatcgc tccaattctc tacagtttgg cgccgcgccc gacagcaaac aggagtcctg
      121 ccgcttggat cgcggccagc agcagaaaca tgccgatgta gccggcgatg tcgatggcgc
      181 tgccggtgat cagcgaaccc acgccataac ttaacgggta ggcgacggag aaggtcgcca
      241 tctgtttgcc gcgccgttgg ggatcggcgc gttcgacggc tagggcgagc gtcgtcgaac
      301 tgccgatggc attgccgagc atgtaaatcg cgccgcagac aatcacgccc aataaattag
      361 acattatggt gatcagaatc agggcgatca cctgcaaggc aaagccggca gcgatggaac
      421 gagctcggcc gatgcgatcg gacaggcggc cgagcagcgg ccgaccgagc atgctggtgg
      481 cgccgatgac aacgaaatag gcggcgaagt tgccgatgcc aagttctttg gcgtagagaa
      541 ttatgaagtt ggtgagcgcc ggcagcgata ggttgagcca gagcaggagc agcgacggca
      601 ggaagatctc cggctcgacg aaatgaaata tttcgcgcca ccaatcggtt tttttatggg
      661 tgccgtgcac tttcgccgga ggtggcaccg acgatgccat ggcccagccg gtgagcgcgc
      721 cggcgatgga aaaaatcgcc gtgacgacga acaccaggcg gtagccgccg aaggacgcgt
      781 agagcagcca gagggcgaag ggcggaaaaa agatttgcgc cgagctttgc acgccgctgt
      841 agagcccgga ggcggcgccg cgctttttct ccggcgagat cagcgccagg agcgagtaac
      901 cgccggtgtt caaacccgcc cagccgatgc cgcgcaggcc attggccaat gccgcggccg
      961 ggacgaacgg aatgaagcag agaaaaatgc tcacggcttg aaatagcaaa ccggcgatca
     1021 tcacgccggc ttcgctccaa cggtcggccc agtgaccgac cagcggacgg accacgacgc
     1081 tggtgacggc gaagcaggcg agcacgatgc cgacgacgac cggaggcgcg cccaattgcg
     1141 tgaggaaaag cggcagcaca ggggcgagca tgaaatgctg cgcgtagccc agcaactgca
     1201 cggcgcagag taaaataaaa gttttcgtcc agatcgtgtc agccataaga ataggatttc
     1261 gttcaagggt tcaaggttca acgttcaatg tcagagatgc cgctccgaag tgttccgtcc
     1321 ttgaactctt gaacccttga acctagaacg gccgcctgag ctatttcagc cttgcccggt
     1381 tggcgatggt gatgaacagt ccgctggcgc cgagggcggc gaggacgaga tacatggcga
     1441 aaaatccgaa ccattgcacc aggctgccgc agatcaaagc gccgatgccg ttgctgagcg
     1501 gcagagcgat ggaaaaggtc gccatggcac ggccgcgccg ttcgggcttg gcttgttcca
     1561 tggcgatggc gagagtcgtc gagctgctca tggcgaggcc gagcatataa agcgcgccgg
     1621 aaatgattaa tgcgaataag ttggtagcga aagcgagtag caccagggcg atggtttcca
     1681 ggatgaagca ggcgagtaag gcgcggccgc ggccgacccg gtcggagact ttgccgagca
     1741 gcggtcgcgc caggatgctg gtggcgccgc tgacgacgta gaaccaaccg atgttgtcga
     1801 tcgccagttc acgggcgtag aggactaaaa agctcgccac cgctgggaag gtgacatggg
     1861 agacaaacga cagaaccgag gcgagaatga tctcgcggtc taggacgctc aggatttcct
     1921 gccaccagga accggacggc gccgcgcgcc gctcttggct gcgcggcggc atatggcgct
     1981 tgagcacggc ggcggccacc gcgccggtgg cggccaaggc gaatgcgacg agaaagacac
     2041 cgcgaaagcc gccgaagggt gcccaagagg gtaaatcgat gagccaaagc gcgactgccg
     2101 gcagtaatat agtcccgctc gcctgcacgc cgctataata tcccgacgct tcgccgcgcc
     2161 gctgcggcgg cgcgctcagt gccagcatgg aataaccggc ggcgctcatg gcggcccagc
     2221 cgatgccgcg cagggcattg gcgaccatgg tggcttcggt cagcggaatt aaacagagca
     2281 acaccgcgag cgccagcaag gttaggccgc aaaacgacac gccgggctcg gaccattgat
     2341 cagcccagcc gccgatgatc ggccgaaaga ccacgctggt gacggcgaag caggcgatca
     2401 cgaggccgac ttgaaacggc gtgccgccga gcgacgtaat gtagagcgga aaggtcggct
     2461 gcagcagcgc atgctgcgac gag
//
LOCUS       DATIRS010000207         3310 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1785719, whole genome shotgun sequence.
ACCESSION   DATIRS010000207 DATIRS010000000
VERSION     DATIRS010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3310
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1785719"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..300)
                     /locus_tag="VLM90_02630"
     CDS             complement(<1..300)
                     /locus_tag="VLM90_02630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11877.1"
                     /translation="MVAQKIAALLLSIIVLVPVVGATTLDEVIEGARKEGILRGQWGQ
                     NSYGGSEGFQEILAGMNKKYKLNLKGQYTPGPDMQRLMLRVIQEASAGQPSSTDVY"
     gene            complement(315..1403)
                     /locus_tag="VLM90_02635"
     CDS             complement(315..1403)
                     /locus_tag="VLM90_02635"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ11878.1"
                     /translation="MISIRRLHKRFTVSDGVVAAINSLDLEVAEGELFVIVGASGSGK
                     TTLLRCIAGLETPDGGEICIAGQIVSSDNPPAWVPPQQRKLGMVFQSYAVWPHLTVAQ
                     NIALPLAEGAQKIPRKEVAARVKEALHLVQLEEQADRPATLLSGGQQQRVALARAIAV
                     SSRLLLMDEPLSNLDARLREDVRGRIRELAKQLGATMLYVTHDQVEAMAIADKIAMMQ
                     AGELLQVGAPMEIYHKPNGADVAEFFGSVNWLDGKVVEPGVAESPIGKLLIERPSKVG
                     EKVLLGFRPECLHFANGANESNSFPGKLISSTFLGDQFIFSATVNGQPLVGKNRSVPQ
                     RPDGTVELRVPPSDIMVFAPRETSSKLS"
     gene            complement(1531..2037)
                     /locus_tag="VLM90_02640"
     CDS             complement(1531..2037)
                     /locus_tag="VLM90_02640"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSQ11879.1"
                     /translation="MSEKSPINIKKIGHIVYACSDIERTSKFWTEIMGFKFSDKNEGG
                     MVFFRNANDHHTIALVQATEKNQLPKRGEVGFDHMALEVATVSELFKIRDFLKAKGVT
                     IFYEGRRGPGGNPGLEFYDPDGYKIEIYAAMDQIGTDGKSRPADEWSRATTLEEAVNN
                     PLPGAEYH"
     gene            complement(2139..2546)
                     /locus_tag="VLM90_02645"
     CDS             complement(2139..2546)
                     /locus_tag="VLM90_02645"
                     /inference="COORDINATES: protein motif:HMM:NF020908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ family domain-containing protein"
                     /protein_id="HSQ11880.1"
                     /translation="MATRRLSPATGAVGFIERLAEQRILEAQRKGEFDDLAGKGKPLE
                     LADHSDVPEDLRMAYHVLKNANVLPPEAELMKDIRILEDLLKHVEDEGERKSLAKSLQ
                     WKMIRLDILKRRSMNLASVRDYSRKIVAKLSRR"
     gene            complement(2602..>3310)
                     /locus_tag="VLM90_02650"
     CDS             complement(2602..>3310)
                     /locus_tag="VLM90_02650"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ11881.1"
                     /translation="PLFILTIVFSVGLLLVYRAIDERHQPRLAQKKISKASGVFVTKM
                     SILAFVDNFGAGMAGGLLPYWFFLRFGVELKSLGLLFFISNFLAALSFLSAPIIARRI
                     GLVKTMAFSHGLASMIFIAIPLAPTFFIAAALLAIRSFFAYMDNPLRASFTMAMVQSN
                     ERGSAAGVTSLARTVPFGLSPTIATYLMQSVSLSLPLFIGGGLQLVNDVVFYTMFRHV
                     RPPEEMNPKPYEVNPTA"
BASE COUNT          703 a          912 c          970 g          725 t
ORIGIN      
        1 ataaacatcg gtgctggagg gctggccagc cgaggcttcc tggatcacgc gcagcatgag
       61 ccgctgcatg tcgggacccg gcgtgtactg gcctttgaga ttgagtttgt attttttgtt
      121 catgcccgca aggatttcct gaaaaccctc gctaccgcca tagctattct gcccccattg
      181 cccgcgcagg atgccttctt ttcttgcgcc ctcgatcact tcgtcaagcg tcgtggcacc
      241 aacaacgggt accaaaacta tgatcgacaa caacaacgcg gcgatttttt gagcgaccat
      301 aacgatttcc tcctctaaga caattttgaa ctggtttcac gtggcgcaaa taccatgata
      361 tccgatggcg ggaccctaag ctcgaccgtt ccgtccggcc tttgcgggac gctgcggttc
      421 ttgccgacga gcggctggcc gttaacggta gcgctaaata tgaactggtc gccgagaaaa
      481 gtgctcgaga taagcttgcc gggaaaggaa ttggattcat tagcgccgtt ggcgaaatga
      541 agacactcgg ggcgaaagcc gagcagcact ttttcgccaa ctttggacgg cctctcgatc
      601 agcagtttgc caatcggcga ttcggctacg cccggttcga caactttgcc atccagccaa
      661 ttcaccgagc cgaaaaactc ggcgacatcg gcgccgttcg gtttgtgata gatctccatc
      721 ggcgcgccga cctgtaacaa ttctccggct tgcatcatgg cgattttatc cgcgatcgcc
      781 atcgcctcga cttgatcgtg ggtgacgtag agcatggtgg cgccgagctg cttagccaac
      841 tcacgaatcc ggccgcggac atcttcgcgc aggcgggcgt cgagattgct gagcggttcg
      901 tccatcaaaa gtaatcgcga gcttacggca atggcgcgcg ccaaggcgac tctttgctgc
      961 tgcccgccac tgagcaaggt cgccggacgg tcggcttgct cttccagttg cactaaatgc
     1021 agcgcttcct tgacgcgcgc ggcgacttct ttgcgcggga ttttttgcgc accttcagct
     1081 aggggtaggg cgatgttctg agcgaccgtg agatgcggcc agacggcgta ggactgaaac
     1141 accatgccga gctttcgctg ttgcggtgga acccatgccg gcggattgtc ggacgaaaca
     1201 atctgaccgg caatgcaaat ctcaccgccg tcgggggttt ccagtccggc gatgcagcgc
     1261 agcagcgtcg tcttacccga gccgctggcg ccgactataa cgaataactc gccctcggca
     1321 acttcaagat caagcgaatt gatcgccgca accacgccgt cgctgacggt gaaccgtttg
     1381 tgcaggcggc ggatggagat cattggattt aatttggtgc catgcgtgaa cgagcgtcag
     1441 acggcggtcc gagagtggaa gcgattggtt cgggtctcga gttccgggtt tcgcgttaac
     1501 ccgaaactca aaacccgagg cggccatgct ctaatggtac tcggcgccgg gcagcggatt
     1561 gtttactgct tcttccaagg tggtcgcccg gctccattca tcggccgggc ggcttttgcc
     1621 gtcggtgccg atctgatcca tggcggcgta gatttcgatc ttatagccat cgggatcgta
     1681 aaattcgagg ccgggattgc cgccggggcc gcgccggccc tcgtagaaaa tcgtcacgcc
     1741 cttggccttc aggaaatcgc ggatcttgaa cagctccgac acggtggcga cttccaacgc
     1801 catatgatcg aagccgactt cgccgcgttt gggcagttga ttcttttccg tcgcctgcac
     1861 cagggcgatg gtgtgatggt cgttggcgtt gcggaaaaac accatgccgc cctcgttctt
     1921 atcggaaaac ttaaagccca tgatctcggt ccaaaatttc gacgtgcgct cgatatcgct
     1981 gcacgcgtag acgatatgac cgattttctt gatgttgatg ggagacttct ctgacataac
     2041 tattctcctt tcgtcggcaa agcggcgagt tgacgccggt atttaaggta ggcgatttct
     2101 accacggaaa attcgccaag gcaaagctaa atctttggct agcggcgcga caacttggcg
     2161 acgatcttgc ggctataatc gcgcacgctg gcgagattca tcgaccggcg cttgagaata
     2221 tccaagcgga tcattttcca ctgcagactc ttggccagcg atttccgctc gccctcgtct
     2281 tcgacatgct tgagcagatc ttcgaggatg cggatgtctt tcatcagttc ggcttcgggg
     2341 ggcaggacgt tggcgttctt caggacatgg taggccatgc gtaaatcttc cggcacgtcg
     2401 ctgtggtctg ccaattccag cggcttgccc ttgccggcga ggtcgtcgaa ctcgcctttg
     2461 cgctgggctt cgaggatgcg ctgttcggcc aaccgttcga tgaaaccgac ggcgccggtg
     2521 gctggggata ggcgtctagt tgccatggct aataaaattc aatgttcaag ccgttcaatc
     2581 gctgcgctcc gttcaaaacg ttcaagccgt cggattcacc tcgtacggtt tcggattcat
     2641 ctcctcaggc ggtcggacat ggcgaaacat cgtgtagaag accacatcgt tgaccaattg
     2701 tagcccgccg ccgatgaata atggaagtga caacgacacg ctttgcatga gataggtcgc
     2761 gatcgtcgga ctgaggccaa aagggacggt gcgggccagg ctggtgacgc cggcggcaga
     2821 gccgcgctcg ttggactgga ccatagccat ggtgaaggat gcccgcaggg gattatccat
     2881 gtaggcgaag aacgagcgaa tcgccagcag ggcggcggcg atgaagaacg ttggcgccaa
     2941 tggaatagcg atgaaaatca tcgaagcgag cccgtgggaa aacgccatgg ttttcaccag
     3001 gccgatccgg cgcgcgatga tcggcgcgct caggaacgac agggcggcga ggaagttgga
     3061 tataaaaaaa agcaggccga gggatttaag ctcgacgcca aagcgcagga aaaaccaata
     3121 ggggagcaga ccgcccgcca tgcctgcgcc gaagttgtcg acgaaggcta atatcgacat
     3181 cttggtgacg aacacgccgc tggctttgga gattttcttt tgcgcgagcc gtggttggtg
     3241 ccgttcgtcg atcgcacggt aaaccaacaa aaggccgacg ctgaaaacaa tcgttaaaat
     3301 aaacagcggc
//
LOCUS       DATIRS010000208         3081 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1294122, whole genome shotgun sequence.
ACCESSION   DATIRS010000208 DATIRS010000000
VERSION     DATIRS010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3081
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1294122"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..859
                     /locus_tag="VLM90_02655"
     CDS             <1..859
                     /locus_tag="VLM90_02655"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSQ11882.1"
                     /translation="ALSLSAQSSWRLMPNVVPGVHHIANAYCYRCPFGLTYPSCDLKC
                     AKDAEEAIQTMTSQGRVAAFLAEPIQGVGGFIVPPKEYFKEIVGIIRKYGGLFIADEV
                     QTAWGRTGGKMFGIEHWGVDPDIMTFAKGMANGVPIGATIATPEVADSMQGNTISTFG
                     GNPVTCTAAHATINVIEEENLVENARVMGNRLREGLDALKAKYPVIGDVRGMGLMQGM
                     ELVGEQKKPDVESTKRLMELTKNNGLLLGKGGTYGNVIRVAPSLNVNQDEVDHALRVL
                     DQSFGQLGQ"
     gene            926..1924
                     /locus_tag="VLM90_02660"
     CDS             926..1924
                     /locus_tag="VLM90_02660"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSQ11883.1"
                     /translation="MNKLIRRILGAIPVLLAISFLIFLLMHIAPGDPVTLMLGDNATP
                     EDVARLRNELGLDKPIMVQYWDFLSRAVRGDFGRSLKFGEPVTKLVAERLPATLELAL
                     SSLFVAISIAVPLGVYSAIRHNSLVDHAGMSVALIGVSLPNFWLGIMLIYFLGGQLNL
                     LPVAGRIEYGIEIQPITGLYLLDSLITGNFAAMASVAKHLLMPAFTLGTALAAIVTRI
                     SRSSVLEVMRQDYVTTARAKGLSEKTVIWRHIVRNALITIVTILGLQLGALLSGSVVT
                     ETVFSFPGIGDLLIQSISARDYKLTQILILMFALTYFAVNLLVDLLYSWIDPRIKF"
     gene            1924..2763
                     /locus_tag="VLM90_02665"
     CDS             1924..2763
                     /locus_tag="VLM90_02665"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSQ11884.1"
                     /translation="MLSFRYLKIWVGGAILALLVVCGVAAPLIAPRDPQAQTLEDRLR
                     PPRWSENGLQAYLLGTDNLGRDMLSRIVYGSRISLMVGAATVIFAGLVGCTLGAIAGY
                     FGSTADEIVSKISEIFLAFPFLLLAIAIMAFLGQGVGNLIMALMLSRWVQYCRVVRGE
                     VLSLKERDFVTAAKALGARDGYVIFHHVIPNTLASVTVIATFGMAIVIITEASLSFLG
                     LGVPVHIPTWGSMLAEGRSYINRAPWLTIFPGLAIFITVFGINLLGDGLRDIFDPKLR
                     RQR"
     gene            2783..>3081
                     /locus_tag="VLM90_02670"
     CDS             2783..>3081
                     /locus_tag="VLM90_02670"
                     /inference="COORDINATES: protein motif:HMM:NF021997.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HSQ11885.1"
                     /translation="MLKKRSALSRRQFLKQSAALAAGAAVGPYFLRNADAASRDRVTI
                     FHSSVADSIHPYNHSSSPIYGNWQHVIEPLVEYDVARKDFIGVLAESWQFQGNKWV"
BASE COUNT          589 a          835 c          916 g          741 t
ORIGIN      
        1 ggccttgagt ttgtcggcgc agtcgagctg gcgcttgatg cccaacgtgg ttcccggcgt
       61 acatcatatc gccaacgcat actgctaccg ctgcccgttc ggtctgacct atccgagctg
      121 cgatcttaag tgcgccaagg acgccgaaga ggcgattcaa accatgacct cccaggggcg
      181 ggtggcggca tttctcgccg aaccgatcca gggcgtcggc ggtttcatcg tgccgccgaa
      241 agaatatttc aaagagatcg tcggcatcat tcgcaaatac ggcggcttgt tcatcgccga
      301 cgaggtgcag accgcctggg ggcgcaccgg cggcaagatg ttcggcatcg agcattgggg
      361 cgtcgaccct gacatcatga cttttgccaa gggcatggcc aacggcgtgc ctatcggcgc
      421 caccatcgcg acaccggaag tggccgacag catgcagggc aatacgatct cgaccttcgg
      481 cggcaatccg gtgacctgca ccgcggcgca tgcgacgatc aacgtcatcg aagaggagaa
      541 cctggtcgag aacgcccggg tgatgggtaa ccggttgcgc gagggtttgg acgcgctcaa
      601 ggccaagtac ccggtgatcg gcgatgtccg cggcatggga ttgatgcaag gcatggagct
      661 ggtcggcgaa cagaagaagc ccgatgtcga gagcaccaag cggttgatgg aattgaccaa
      721 aaacaatggt cttctgctgg gcaagggcgg cacctacggc aatgtcattc gcgtcgcgcc
      781 gtcattgaac gttaaccagg acgaagtcga tcacgccctc cgggttttgg atcagtcgtt
      841 tggccagttg gggcagtagt gatatcggtt agcaccagga aacctggagt actataaatt
      901 ggctaattcc tagcgttcgc cagacatgaa caaactcatt cgcagaatcc tcggcgcgat
      961 tccagttttg ctggccatct cttttcttat ttttctctta atgcatatcg cgccgggaga
     1021 tccggtcact ttgatgctcg gcgacaatgc cacgcccgaa gatgtcgcca ggttgcgcaa
     1081 cgagctcggc ttggataagc cgataatggt tcagtactgg gattttcttt cccgcgccgt
     1141 gcgcggcgac tttggccggt cgctcaagtt tggcgagccg gtgaccaagt tggtcgccga
     1201 gcggctgccg gcgaccctgg aactcgcctt atcgagtttg ttcgttgcga ttagcatcgc
     1261 ggtgccactg ggcgtctact cggcgattcg ccacaattcg ctggtcgacc atgccggcat
     1321 gagcgtagcg ttgatcggtg tgtctttacc gaacttttgg ttgggcatca tgctgattta
     1381 ctttctcggc ggtcagctca atcttttgcc agtcgccggc cgcatcgagt acggcatcga
     1441 gatccagccg attaccggcc tctatctcct cgatagttta ataacgggaa actttgcggc
     1501 gatggccagc gtggccaagc atttgttgat gccggcgttt acgctcggga ccgcgctcgc
     1561 ggcgatcgtc acgcggattt cccgttccag cgtgctcgaa gtgatgcgcc aggattacgt
     1621 aaccaccgcc cgcgccaagg ggctgagcga aaaaactgtc atctggcgcc atatcgtgcg
     1681 caatgcattg attacgattg tgacgattct gggacttcag ttgggcgcct tgctcagcgg
     1741 ttcggtggtc accgaaacgg tattttcgtt ccccgggatt ggcgacctgt tgattcagtc
     1801 gatttcggcg cgcgactata agcttaccca aatcttgatt ctaatgttcg cgctgacgta
     1861 cttcgcggtt aatttgttgg tggaccttct ctatagttgg atcgatccaa ggatcaagtt
     1921 ctgatgcttt ctttccgtta tctgaaaatt tgggtgggcg gcgctatcct ggcgctgctg
     1981 gtggtctgcg gcgtcgccgc gccgctgatc gcgccgcgcg atccgcaagc gcaaaccttg
     2041 gaagaccggc tgcgcccgcc gcgctggagc gagaacggct tgcaagccta tcttctcggt
     2101 accgataatt taggccgcga catgttgagc cggatcgtct acggctcgcg gatctctttg
     2161 atggtcggcg cggccaccgt gattttcgcc ggcctggtcg gctgtaccct tggcgcgatt
     2221 gctggatatt tcggcagcac ggctgatgaa attgtcagca agatctcgga aatttttctc
     2281 gcctttccgt ttctcttgct cgctattgcg atcatggcat ttctcggtca aggcgtcggt
     2341 aatctcatca tggcgctgat gctcagccgc tgggtgcagt attgccgggt ggtgcgcggt
     2401 gaagtgctat cgttaaagga gcgcgacttc gtcactgcgg ccaaagcgct aggcgctaga
     2461 gatggctatg tgattttcca ccatgtgatt cccaacaccc tggcgagcgt cacggtgatc
     2521 gccacctttg gcatggccat cgtcatcatc accgaagcga gcctgagttt cctcggtctc
     2581 ggtgtgccgg tgcatattcc gacctggggt tcgatgcttg cggaaggacg cagttacatc
     2641 aaccgcgcgc cgtggttgac gatcttccct gggctggcga tttttattac tgtattcggc
     2701 atcaatttat tgggcgatgg cttgagggat attttcgatc ccaagttgcg gcgacagaga
     2761 taaaagacaa aggagaaact ttatgcttaa gaaacgatcg gcgctcagtc ggcgccagtt
     2821 tctcaaacag agcgcagcac tggcggccgg ggcggccgtt gggccgtatt ttttgcgtaa
     2881 tgcggacgcc gcctcacgcg accgtgtgac gatctttcat tcgagcgtgg ccgattcgat
     2941 ccatccttat aaccatagct cgagtccgat ttacggcaac tggcagcatg ttatcgagcc
     3001 gttggtggag tacgatgtcg cgcgcaaaga tttcatcggc gtgcttgctg agtcgtggca
     3061 attccaaggt aataagtggg t
//
LOCUS       DATIRS010000209         1638 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_704431, whole genome shotgun sequence.
ACCESSION   DATIRS010000209 DATIRS010000000
VERSION     DATIRS010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1638
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_704431"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            62..>1638
                     /locus_tag="VLM90_02675"
     CDS             62..>1638
                     /locus_tag="VLM90_02675"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSQ11886.1"
                     /translation="MWALDFTLNSVTMLALVLMVGIVIDDAIIVLENIFRFVEEKRMN
                     PFEAARAATAEIGLAVMATTFSLVVIFVPVAFMSSISGRFLYQFGLTAAVAVLVSLLV
                     SFTLTPMMSARMLRAEDAVAGGEASHSRQGFYAWIDRHYERMLRWSLAHRMAVMIFAA
                     LVVLSSIPLYTLVQQEYIPSNVDEAEFDVNVTAPQGVSLAAVDEIMRAVENQLRAIPL
                     VRLMLCDAGGGFISGVGTGGCYVRIAPHDERIFSFTRLWRETLNGQPWVAFSNTSQRD
                     VMQQVRAGLNKFTDLRISVRNLPSFNIGGGNWDIDFVLRGPNLQTLAAYGEQLRLRSQ
                     KLGIIDADTTLKLDNPELRVVIDRKRAADLNVDTEHIASALRLMVGGDEKVSRFIDPS
                     VNEEYDVQLRLSQSDREDIGTISHLYVPRAGTGLVRLDNLVLVAPAMSASRIDRLDRQ
                     RQVSLRAQIAPGFALADRLEALNGAVREMNLPPEYTTTVSGRGRELERTFTQFIWAFL
                     LSIIFMYMILASQYDST"
BASE COUNT          299 a          499 c          468 g          372 t
ORIGIN      
        1 gaggtccacc ttgatcgccg cggtcgccat tcccgcgtcg gtcattgcaa ccttcggcat
       61 gatgtgggcc ctcgacttta cgttgaatag cgtgaccatg ctggcactcg tgttgatggt
      121 cggcatcgtc atcgatgacg ccatcatcgt cttggaaaac attttccgct tcgttgagga
      181 aaagcgcatg aaccccttcg aggcggcccg cgccgcgacc gccgaaatcg gcttggcggt
      241 catggcgacg acgttcagcc tggtcgtcat cttcgttccc gtcgccttca tgtccagcat
      301 atccggacgt tttctctatc agttcggact gactgcggca gtggccgtgc tggtcagtct
      361 tttggtctcg tttacgttga caccgatgat gagcgcgcgc atgctgcgcg ccgaggacgc
      421 ggtggccggg ggcgaggcat cccattcacg ccaaggattt tacgcctgga tcgaccgtca
      481 ttacgagcgc atgctgcgat ggtccctggc ccaccgcatg gcggtcatga tattcgcggc
      541 actcgtggtg ctctcctcca ttcccctcta tacactggtg caacaggaat atattcccag
      601 caacgtcgat gaagcggagt tcgatgtcaa cgtcaccgcc cctcaaggcg ttagtttggc
      661 ggcggtggac gagattatgc gcgccgtgga aaaccagctg cgcgccattc cgttagtgcg
      721 cctgatgctc tgcgatgccg gcggaggctt catcagcggc gtgggcacgg gcggctgtta
      781 cgtgcgcatc gcgccccacg atgagcggat tttttcgttt acccgccttt ggcgcgagac
      841 ccttaacggt caaccctggg tggcattcag caatacttca cagcgcgacg tgatgcagca
      901 agtccgcgcc ggcctgaata aattcacgga tctccgtatt tccgtgcgca acctgccatc
      961 gttcaacatc ggcggcggca actgggacat cgatttcgtt ctgcgcggtc cgaatcttca
     1021 aaccctggcg gcttatggcg agcaactgcg cctccgttcg cagaagctcg gtatcatcga
     1081 tgccgatact acgctcaagc tcgacaatcc ggaattgcgc gtggtgatcg atcgcaagcg
     1141 cgccgccgac ctcaacgtgg acacggagca catcgcctca gccttgcggc taatggtcgg
     1201 cggcgacgag aaagtgtcgc gcttcatcga tccgtccgtc aacgaagaat atgacgtgca
     1261 attgcgtttg tcgcagtccg atcgagaaga tatcgggacc atctctcacc tctacgttcc
     1321 gcgcgcggga acgggtctgg tgcggcttga caacctggta ttggtcgcgc cggccatgag
     1381 cgcgtcgcgc atcgaccggc tggatcgtca acgccaggtg agcctgcgcg ctcaaatcgc
     1441 tcccggtttc gcgctcgccg accgtctgga ggcgctcaat ggagcggtgc gcgaaatgaa
     1501 tttacccccc gaatacacca ccaccgtatc cgggcgcggc cgtgaattgg aacgcacctt
     1561 tacccagttt atatgggctt ttttgctttc catcatcttt atgtacatga ttctcgcttc
     1621 gcagtatgac agcacgat
//
LOCUS       DATIRS010000210         1865 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1392839, whole genome shotgun sequence.
ACCESSION   DATIRS010000210 DATIRS010000000
VERSION     DATIRS010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1865)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1865)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1865
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1392839"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..552
                     /locus_tag="VLM90_02680"
     CDS             <1..552
                     /locus_tag="VLM90_02680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11887.1"
                     /translation="HAKHVKIWPMKLLRNLGLVLTLMTLAGCSHPMTMRSPEGVTYDG
                     RYRFGRDDSGLMQIHGPENEVLLGRFDRVGRTTFVENYQQAFGRGTIELDGPALSRHV
                     GTLGGVIGPTSGFHETAFADPAAAVEGRPTKSITGPLFYWVASLQGDRRTVLGCFLIG
                     SLYTGSGFGRCKSQNGQEYNIDF"
     gene            619..1608
                     /locus_tag="VLM90_02685"
     CDS             619..1608
                     /locus_tag="VLM90_02685"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03619 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HSQ11888.1"
                     /translation="MTSNIKFGLLLPHFGAHMSIADCREGARRAEAYGFDSVWVRDHL
                     VFKPHAGEGGDPSHLECLMMLASLAPVTTRLQFGTAMAICHRHPIHLAQSCAALSEVS
                     KGRLILGLGLGGFPHEFAAAGRPSALAERAELARINIEICRALWRGETLSHRSVYFQF
                     KDVALKPRPDKSIPIWIGGSTPAACRRAVALGDGWMPARINYPTFSKRIEYLRTLCAE
                     AGQPMVETAVMPFTTIGKDADDALRGIDVKGLLDEAHNSSTWIKPPSGKFATLEDLGG
                     VLIAGSPADIVHESATYEAAGANHIVYDLRLRFNDWYEQIDLLGKEVLPALRS"
     gene            complement(1679..>1865)
                     /locus_tag="VLM90_02690"
     CDS             complement(1679..>1865)
                     /locus_tag="VLM90_02690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11889.1"
                     /translation="AMLPQWASHKDGERLDYLHERIVALLTPDEFTEWRAALDQAKVE
                     GTFFIAEPFHCAVGRKQ"
BASE COUNT          361 a          558 c          549 g          397 t
ORIGIN      
        1 cacgcaaagc atgttaagat ttggccgatg aagttgttgc gcaatctcgg cctggtccta
       61 acgctcatga cgctcgccgg ctgttctcat ccgatgacca tgagatcgcc tgaaggcgtg
      121 acctacgacg ggcgttatcg tttcggccgc gacgacagcg gtctcatgca aattcatggg
      181 ccggaaaacg aagtgctgct gggccgcttc gaccgagtcg gccggacgac atttgtcgag
      241 aactatcagc aagcctttgg ccgcggcacc atcgagcttg acggccccgc cctgtcgcgc
      301 catgtcggaa ctctaggcgg ggtgattgga ccgacctcag gctttcatga aaccgccttt
      361 gccgatccgg ccgctgccgt cgagggacgg ccgaccaagt cgatcaccgg gccgctgttt
      421 tactgggtcg cctcgctgca aggcgaccgg cgcaccgtgc tgggttgctt tctcattggc
      481 tccttgtaca ccggcagcgg tttcggccgc tgtaagagcc agaacggcca agagtacaac
      541 atcgattttt aactatttgt tttcgttgcc ggttcccctc agcgcgatac cgtcggccta
      601 cttgcaagac ataatctcat gacgtcaaat atcaagttcg gtctgctgct gccccacttc
      661 ggcgcccaca tgtcgattgc cgattgccgc gagggcgcgc gccgcgccga ggcttacggt
      721 ttcgattcgg tttgggtgcg cgatcacttg gtgttcaaac cgcatgccgg cgaaggcggc
      781 gaccccagcc atttggaatg cctgatgatg ctcgcgtcat tggcgccggt gacgacccga
      841 ttgcagttcg gcaccgccat ggcgatctgc catcgtcatc cgattcacct ggcgcaatcc
      901 tgcgcggcgt taagcgaagt ctccaaagga cggttgattt taggtcttgg gttaggcggc
      961 tttccccatg agtttgccgc cgccggccgg cccagtgcgc tcgccgagcg cgccgaactg
     1021 gcacggatca atatcgaaat ctgccgggcg ttgtggcgcg gcgaaacgct atcccatcgg
     1081 agcgtttatt ttcaattcaa agatgtcgct ctaaagccgc gccccgacaa atcgattccg
     1141 atctggatcg gcggcagcac gccggcggca tgccgccgtg ccgtggcgct gggcgatggc
     1201 tggatgccgg cgcggatcaa ttacccgacg ttcagcaaac ggatagaata cctgcgtaca
     1261 ctctgcgccg aggcgggcca gccgatggtt gaaaccgcgg tgatgccgtt taccactatc
     1321 ggcaaggatg ccgacgacgc gctgcgcggc attgacgtca aaggcttgtt ggatgaagcg
     1381 cacaattcgt ccacctggat caaaccgcca tcgggaaaat ttgccacact cgaagacctg
     1441 ggcggcgtgc tgatcgccgg ctcgcctgcc gacatcgtgc acgaaagcgc aacctatgaa
     1501 gccgccggcg ccaatcacat tgtctacgac ttgcgcctgc gctttaacga ctggtacgag
     1561 cagatcgatc tgttggggaa agaagtgctg ccggcgctgc gctcataaaa cagtaaggag
     1621 tgaatagtaa ggagcaagga gttgggggag ggactcctga ctgctcactc cttactactt
     1681 actgtttcct accgacggca cagtgaaacg gttctgcgat gaaaaacgtc ccttcaacct
     1741 tggcctgatc tagagctgcg cgccattccg tgaattcgtc cggcgtgagt aacgcgacga
     1801 tgcgctcgtg cagatagtcc agtctttcgc cgtccttgtg actcgcccat tgcggcagca
     1861 tcgcg
//
LOCUS       DATIRS010000211         1660 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_999654, whole genome shotgun sequence.
ACCESSION   DATIRS010000211 DATIRS010000000
VERSION     DATIRS010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1660
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_999654"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..772
                     /locus_tag="VLM90_02695"
     CDS             <1..772
                     /locus_tag="VLM90_02695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11890.1"
                     /translation="AGFILDASGFGRVLPRLLGLEKPSDFPVRGALFTHVEDRFTSTA
                     FDRNKIRINVQPDNRDLWYWLIPFSDGRCSIGVVGGLEALARYQGTELERLRALIAAD
                     PATDRLLAQARWDTPVRQLVGYACNVSSLSGRGYALLGNAGEFLDPIFSSGVTIAFKS
                     ASLAAALVPRQLAGATVNWEQEFALPLQQGVDTFRAFVESWYRGGLQRIIFDPVQLAD
                     IRRMIAAILAGYAWDRSNPYVNQTRRRLAALEELCYQG"
     gene            757..1317
                     /locus_tag="VLM90_02700"
     CDS             757..1317
                     /locus_tag="VLM90_02700"
                     /inference="COORDINATES: protein motif:HMM:NF023089.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3261 domain-containing protein"
                     /protein_id="HSQ11891.1"
                     /translation="MLPGLSWVWVLLAAIALHSLGCTDAPAQPARLGLRLAPATLGVT
                     LSLQQHLSIERQGRVDELDAALEIDPERLDMVGLALGQRILALHYDGRSLQSWRHPLV
                     PKQFRGEDVLEDLQLTLWPIEVIEKALPAGWSIAEDGRRRTLRLADQPVLVIDYSGEP
                     RWSGKIELTNLRYRYRLTIQSISSTP"
     gene            1314..>1660
                     /locus_tag="VLM90_02705"
     CDS             1314..>1660
                     /locus_tag="VLM90_02705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11892.1"
                     /translation="MSMIYLNQLGMISSLGNSLDATKRALLELARSGVVLSDDYSPGL
                     PLPLGRIDGNLPLPPVDEWPLPDRSRNNQIALAALQQIRPAVESAIERYGDARFGVVI
                     GTSTSGVAEAEAAL"
BASE COUNT          287 a          512 c          512 g          349 t
ORIGIN      
        1 agccggcttc atcctcgacg ccagcggctt cggccgggtg ctgccccgtt tgctaggttt
       61 ggaaaagcct tcggactttc cggtgcgcgg cgcgctcttc acccatgtcg aagaccgatt
      121 tacctcaacg gccttcgacc gcaacaagat tcgcatcaac gtacagccgg ataaccgcga
      181 cctgtggtac tggttgatcc cgtttagcga cggccgttgt tctattggcg tggtcggcgg
      241 gctcgaagcg ctggcgcgct atcagggtac ggaacttgag cgcttgcgcg cattgatcgc
      301 ggccgatcca gcgacggacc gcttgctcgc ccaggcgcgc tgggatacgc cggtgcggca
      361 gctggtcggt tacgcctgca acgtcagttc gttgtcgggc cgcggttacg cgctgctcgg
      421 caatgccggg gagtttctcg atccgatttt ttcttccggt gtcaccatcg ctttcaaatc
      481 agccagcctg gcggcggcgt tggtaccgcg ccagctcgct ggcgctacgg tcaactggga
      541 gcaggaattt gccctacccc ttcagcaagg cgtcgacacc ttccgcgcct tcgtcgagtc
      601 ctggtatcgc ggcggcttgc agcgaattat tttcgatccg gtacagctcg ccgatatccg
      661 ccgcatgatc gcggcgatcc tggcgggcta cgcttgggac cgcagtaatc cctatgttaa
      721 ccaaacccgg cgacgcttgg cggcgctgga ggaactatgc taccagggct gagctgggtc
      781 tgggtgctgc tcgcggcgat tgcgcttcat tcgctcggct gcaccgatgc gccagcacaa
      841 ccggcgcgtt tgggccttag actcgcaccg gcgacgttgg gagtaacgct cagtttgcag
      901 cagcatctca gcattgaaag acaaggccgt gtcgacgagc tcgatgccgc cctcgaaatt
      961 gacccggagc ggctcgacat ggtcggtctc gcgctcggcc aacggattct cgcgctgcac
     1021 tacgatggcc gctcgctcca atcctggcgc catccactcg taccgaagca gtttcgcggc
     1081 gaggatgttt tagaagattt gcaactgacg ttgtggccca tcgaggttat cgagaaagcc
     1141 ttgccggccg gctggagcat cgccgaggac ggccgtcggc ggactctacg gctggccgat
     1201 caaccggtgc tggtgatcga ttacagcggc gagccgcgtt ggagcggcaa gattgaattg
     1261 accaatctgc gctatcggta tcgcctgacg atacagtcga tttcgagtac tccatgagca
     1321 tgatttatct caaccagctg ggcatgatca gctcgctcgg caatagcctc gacgcaacca
     1381 agcgcgcgct gttggaactg gcgcggagtg gcgtggtatt gtccgatgac tattcaccgg
     1441 gactgccatt gccgcttggc cgcatcgatg gcaatttgcc attgccgccg gtggatgaat
     1501 ggcccttgcc ggaccgtagc cgcaataacc agatcgctct cgccgctttg cagcaaatcc
     1561 gcccggcggt ggaaagtgcg atcgaacgct atggcgacgc acgcttcggt gtcgtcatcg
     1621 gcaccagcac ctccggcgtc gccgaagcgg aagccgcgct
//
LOCUS       DATIRS010000212         1742 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1294431, whole genome shotgun sequence.
ACCESSION   DATIRS010000212 DATIRS010000000
VERSION     DATIRS010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1742)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1742)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1742
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1294431"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..225)
                     /locus_tag="VLM90_02710"
     CDS             complement(<1..225)
                     /locus_tag="VLM90_02710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11893.1"
                     /translation="MQRKPTMVIAIALSASLFVGPVFGAEKAPAKDTVKDAAKAPAAA
                     KKTGGQQVKSETASATATAKAAKAFAQVSAE"
     gene            complement(267..>1742)
                     /locus_tag="VLM90_02715"
     CDS             complement(267..>1742)
                     /locus_tag="VLM90_02715"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSQ11894.1"
                     /translation="YAGGSALLGTGLGALLAWIVARTNTPGKGLVELMPLYPLLMPPI
                     MKNIAWILLLAPKSGILNGMLEQFLGITYPVFNAFSMAGMIWTFGIACVPLGYLFLLP
                     VFLSFDPSLEESAYIAGSRPVHTMLKITFPLALPAFISAFVLNFLRALRSFETPVLQG
                     TPGNIKVFVSRVYDSMALEFNTGLATAYSVVLVVLSVITLYFYVRATRFSERYATITG
                     KGYRVRVIDIGPWKYVTFAAVCLYFLAGIAIPFVVLIVVSIIPYFDYETFMTFPSHMG
                     LNNYRTVLRHASFLNGLRNSVLLSVVIALVTVFAAIVMAFTIHRTRAVGTKIFEFIGT
                     LPLAFPPLVLSVGLVIIFIGTPLYNSLWALGLGLFVAYFPYAFRNASGAIVNIHKELD
                     EAAWVHGAKWRHVFFKVTLPILKPAVGGALFYIFIEAIRNVDVAVLLTAPGLEYGPVT
                     LFEYFRVGQWAEAAAGGVIYLIILIVAVSVAKFAFKMKFSL"
BASE COUNT          434 a          499 c          502 g          307 t
ORIGIN      
        1 ctcggcgctc acttgggcaa acgccttggc ggctttggcg gtggccgtcg cgctcgcggt
       61 ttcgctcttt acctgttggc cgccggtctt cttggccgca gcgggtgcct tcgcggcgtc
      121 tttcacggtg tctttggccg gcgctttctc ggcgccaaac accgggccaa caaacaggct
      181 cgctgacaat gcgatggcta tgaccatcgt cggtttcctt tgcatgctac cctcccctgg
      241 tttgaattcg ttgatatgac cagccgtcac agactgaact tcattttgaa agcgaattta
      301 gccacagaca cggcaacaat caagataatt aagtagatca cgccgccagc ggccgcctcg
      361 gcccactggc cgacacgaaa atactcgaac aaggtcaccg ggccatattc caaacctggc
      421 gcggtcaata gcacggcgac gtcgacgttg cgaatcgcct caatgaaaat gtagaagagc
      481 gcgccgccga cggcgggttt caagatcggc agggtgactt tgaagaatac atggcgccac
      541 ttcgcgccat gcacccatgc cgcttcgtca agttccttat gaatattgac gatggctccc
      601 gaagcgttgc gaaacgcgta gggaaagtag gcaacgaaca agcccaatcc gagggcccat
      661 aggctattat acagcggcgt gccgataaaa atgatcacca gcccgacgga cagaaccagc
      721 ggcggaaagg ccagcggcaa ggtgccgatg aactcaaaaa tcttggtgcc caccgcgcgg
      781 gtgcgatgaa tcgtaaacgc catgacgatg gcggcgaata ccgtgaccaa ggcgataacg
      841 acagacaaca gcactgagtt gcgcagccca ttcaggaagc tcgcgtggcg cagcacggtg
      901 cggtaattgt tcaggcccat gtgcgacgga aaggtcatga acgtctcgta atcgaagtac
      961 ggaatgatcg acacgacgat cagcaccacg aacgggatgg cgatgccggc gagaaaatat
     1021 agacaaaccg ccgcaaaggt aacatatttc cacgggccga tgtcgatgac gcggacgcga
     1081 tagcctttgc cggtgatagt cgcatagcgc tcggagaagc gtgtcgcgcg cacgtagaaa
     1141 taaagcgtta tgaccgacaa gacgaccagc acgacactat acgccgtggc cagcccggtg
     1201 ttgaactcca gagccatgga gtcgtaaacc cggctgacaa atactttgat gttgcccggc
     1261 gtgccctgca acaccggcgt ctcgaaggaa cgcagggcgc gcagaaagtt cagcacaaag
     1321 gccgagataa acgccggcag cgccaaggga aaggtaattt tcagcatggt atgcaccggc
     1381 cggctgccgg cgatataggc gctctcttct aacgatggat cgaaagataa gaacaccggc
     1441 agcaggaaca aatagcctaa cggcacgcag gcgatgccga aggtccaaat catccccgcc
     1501 atactgaagg cattgaagac cggataggtg atgccgagaa actgctcgag catgccgttt
     1561 aaaatccccg acttgggcgc cagcagcaga atccaggcga tatttttcat gatcggcggc
     1621 atcagcagcg ggtagagcgg catcagctcg accaagcctt tacccggggt gttggtccgc
     1681 gccacgatcc acgccaggag tgcgccgagg cccgtcccaa gaagtgccga cccgccggcg
     1741 ta
//
LOCUS       DATIRS010000213         1647 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_704768, whole genome shotgun sequence.
ACCESSION   DATIRS010000213 DATIRS010000000
VERSION     DATIRS010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1647
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_704768"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..541
                     /locus_tag="VLM90_02720"
     CDS             <1..541
                     /locus_tag="VLM90_02720"
                     /inference="COORDINATES: protein motif:HMM:NF013761.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HSQ11895.1"
                     /translation="FHQRPHAAIALQAYLKDAERDVSDLIRWARGQERRVGVRLVKGA
                     YWDSEIAWAKQKTWPIPVFLDKAATDANYERLSRLLLEAHDVIDAAFGSHNLRSLAHA
                     IVAAQEIGVPANGYEIQMLYGMAEPVRQAIVQNGQRVRVYLPVGELLPGISYLIRRLM
                     ENTSNTSFFASNLRREKSG"
     gene            507..>1647
                     /locus_tag="VLM90_02725"
     CDS             507..>1647
                     /locus_tag="VLM90_02725"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSQ11896.1"
                     /translation="MRQTYAEKKAVESLIKAPVLATPVTHLLDYAAARREFRNQAPID
                     FSSEENQERFAAALGEVRGEMRKQRERDEEIWLKSVNPANANEIIRWVRKTTIAEADK
                     AIDKAERFFPEWRDTPAHKRAEMLFRAAELMREQRWELAAREIIEVGKGWREADADVC
                     EAIDYLDYYACEMLRLAQPRETQQLPSETNTYSYEPRGIAAVIAPWNFPLAILAGMTA
                     AALVSGSCVLMKPAEQSPLMAVQLSDILFNAGVPDGACQLLQGGGEIGAYLVHSARIH
                     LFAFTGSREVGLEILREAYTQRPGQAHVKRVVCEMGGKNAVIVDSDADLDEAVGHVID
                     SAFGYQGQKCSAASRLILLEEIHERFLTRLVDAVQSLNIGASEDPR"
BASE COUNT          345 a          464 c          514 g          324 t
ORIGIN      
        1 gtttcatcag cggcctcatg cggcgatcgc gctccaagcg tatcttaaag atgcggaaag
       61 ggatgtcagc gatttgattc gctgggcgcg tggccaagag cgccgcgtcg gagttcgcct
      121 cgtcaaaggc gcctattggg acagtgagat cgcttgggct aagcaaaaga cttggccaat
      181 tccagttttt ttggacaagg ctgcaactga cgccaactac gaacggctga gccgtttgct
      241 gctcgaagcc cacgacgtca tcgacgccgc cttcggcagt cacaatctgc gcagcctggc
      301 ccacgccatc gtcgcggcgc aagagatcgg cgtgccggcc aacggttacg agatacagat
      361 gctctacggc atggccgagc cggtgcgcca ggcgatcgtg cagaatggcc agcgcgtgcg
      421 cgtctatctc ccggtgggcg agttgctgcc gggcatttcg tatctgattc ggcgcttgat
      481 ggagaacacc tcgaacacct ctttttttgc gtcaaaccta cgccgagaaa aaagcggttg
      541 aaagtttgat caaagcaccc gtgctggcaa cgccggtgac gcatctatta gactatgctg
      601 cggcacgaag ggaatttcgt aaccaagcgc caatcgattt ttcctccgag gagaatcaag
      661 agcgctttgc cgccgcgctc ggcgaagtgc gcggcgaaat gagaaaacag cgcgagcgcg
      721 acgaggagat ttggctcaag tcggtgaatc ccgccaatgc caacgaaatc attcgttggg
      781 tgcgaaaaac tacgatcgcg gaagcggaca aggcgatcga taaagccgag cgctttttcc
      841 ccgagtggcg cgacacgccg gcgcacaagc gcgccgagat gcttttccgc gcggcggagc
      901 tcatgcgcga gcagcgttgg gagctcgccg caagggagat tatcgaagtt ggcaagggct
      961 ggcgggaggc cgacgccgat gtctgcgaag cgatagatta tctcgattat tatgcttgcg
     1021 agatgttacg tctagcccaa ccgcgcgaga cccagcagct gcccagcgaa accaacactt
     1081 attcctacga gccacgcggc atcgccgcgg tgatcgcgcc gtggaatttt cctctggcga
     1141 ttctcgccgg tatgacggcg gcggcactgg tcagcggaag ctgcgtgctg atgaagcccg
     1201 ccgaacagtc gccgctgatg gcggtgcagt tgtccgatat tctgttcaac gccggcgtgc
     1261 ccgatggcgc ttgccagttg ctccagggcg gcggcgagat cggcgcgtat ttagtgcact
     1321 cggcgaggat tcatctattc gcctttaccg gctcgcgcga agtcggtttg gaaattcttc
     1381 gcgaagctta cacgcagcgg ccggggcaag cccatgtgaa gcgcgtcgtc tgcgagatgg
     1441 gcggcaagaa cgccgtcatt gtcgatagtg acgccgacct ggacgaagcg gtggggcatg
     1501 ttatcgattc cgctttcgga tatcaggggc aaaaatgctc cgccgcgtcg cggctgattc
     1561 tactagaaga aatacacgag cgctttttga cgcggctagt cgacgcggtg cagagcctca
     1621 atatcggcgc ctccgaagat ccgcgca
//
LOCUS       DATIRS010000214         2329 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_213069, whole genome shotgun sequence.
ACCESSION   DATIRS010000214 DATIRS010000000
VERSION     DATIRS010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2329)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2329)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2329
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_213069"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(183..2285)
                     /locus_tag="VLM90_02730"
     CDS             complement(183..2285)
                     /locus_tag="VLM90_02730"
                     /inference="COORDINATES: protein motif:HMM:TIGR01561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amylo-alpha-1,6-glucosidase"
                     /protein_id="HSQ11897.1"
                     /translation="MTQFTDWQANSSGPQVTERAAPQVIRRVPFSGEGSAAPEVLAER
                     EWLITNGLGGYASGTLLGAITRRYHGLLIAALAAPLGRVMMLNQLTERLELPDGTHIE
                     LSSGLGFNESSESPGFAALAEFRLEDGVPIWRYQIAGIVVEKKIFMVHGHNTTLTSYA
                     LLEGDERVRVKLCPHVQFRPHENSVDNAVGVYTLKATRQGFEILTAAAHPPLRLLVHG
                     RDWSFSAGLAKIDKVFFRAEQQRGYEAFGELCSFGWFEAEVGRGEPMTLVASTEPWES
                     IIKMAPQECYAGEISRRQRLVSGAEIDDGTSMRAELALAADQFVIVPVDPNKEKDAVG
                     AHTIIAGYHWFTDWGRDTMISLEGLTLLTGRQREARGILDVFSEHIRDGLIPNFFPEG
                     EQEGRYHTADATLWFFHALQRYLDMTGDREFLRQLLPKLSGIVAQHLKGTRFGIGVDP
                     DDGLLRQGQQGYQLTWMDAKVDDWVVTPRRGKAVEINALWYNALRLLEGWLREEGDRE
                     RAREIAAHAHKAQDSFNRRYWYIEGGYLYDVIDCDNQAGKHDPACRPNQIMAISLDHP
                     VLDSERWRPLLDVVRQRLLTPYGLRSLAPDHPDYQARYFGDLRARDAAYHQGTVWAWL
                     IGPFVDAWLKAYPDDCAGARGFLTAFTDHLGEGCIGTISEIFDAEPPFTPRGCIAQAW
                     SVAEVLRCAIKTGGFKGR"
BASE COUNT          510 a          687 c          651 g          481 t
ORIGIN      
        1 agcggttcca gcaagtaaca ttaacgaaaa ttgtcggtgt tgcgttcgga aagctaacta
       61 tgcgagggga cacttcccct cgcatagttg cgaacaagcc tgtcgaagtt tcacggatcc
      121 gttactgtca acgattcggc atcaaacact cgtcgaagtt atagttattc gcggcgcggg
      181 aatcagcgcc ccttaaagcc gccggttttg atcgcgcagc gtagcacttc ggcaacgctc
      241 catgcttgag ctatacagcc gcgcggcgta aagggtggtt cggcgtcaaa gatctcgctg
      301 atcgtgccaa tgcaaccctc gcctaagtga tcggtaaagg ccgttagaaa tccgcgcgcg
      361 ccggcgcaat cgtcagggta ggctttcaac cacgcatcga cgaacggccc aatcaaccag
      421 gcccaaaccg taccttgatg ataagcggca tcgcgcgcgc gcagatcgcc gaaataacgc
      481 gcctggtagt ccgggtggtc cggggccagt gaacgcagac cgtaaggcgt gaggaggcgt
      541 tgtcgaacga catcgagaag gggccgccag cgctcgctat caaggaccgg atggtccagc
      601 gaaatggcca tgatctgatt gggacggcat gcgggatcgt gcttgccagc ttgattgtcg
      661 caatcgataa cgtcgtaaag atagccgcct tcgatatacc aatagcggcg gttgaaagaa
      721 tcctgggctt tgtgcgcgtg tgcggcaatc tcgcgcgctc tctctctatc accttcttcg
      781 cgcagccatc cttccaggag gcgtagcgcg ttataccaga gggcgttgat ctccaccgct
      841 ttgccgcgcc gcggcgtcac cacccaatcg tccaccttgg cgtccatcca ggtgagctga
      901 tagccttgct gcccttgtcg cagcagacca tcgtctggat cgacaccgat accgaagcgc
      961 gtccctttca ggtgctgggc cacgatgccg gacaatttcg gcagcaattg gcgcaaaaac
     1021 tcgcgatcgc cggtcatatc gagataacgc tgcaacgcgt gaaaaaacca taacgtcgca
     1081 tccgcggtat gataacgccc ttcctgctca ccctcgggaa aaaaatttgg aatcaacccg
     1141 tcgcgaatat gttcggaaaa tacgtcgagt atgccgcgcg cctcgcgttg gcggccggtc
     1201 aacagcgtta acccctccag actgatcatc gtgtcgcggc cccaatcggt aaaccaatga
     1261 taaccggcga taatcgtatg ggcgccgacg gcgtcttttt ctttgttcgg atcgacgggc
     1321 acgatgacaa actggtcggc agccagcgcc agctccgctc gcatcgatgt gccgtcatct
     1381 atttcggcgc ccgagaccaa ccgttgtcgc cgggagattt ctccggcgta acactcttgc
     1441 ggcgccattt tgataatcga ttcccagggt tcggtcgagg ccactagagt catcggctcg
     1501 ccgcggccaa cttcggcttc aaaccagccg aaactgcata gctcgccgaa cgcctcataa
     1561 ccgcgctgct gctcggcgcg aaagaacact ttgtcgattt tggcgaggcc agcgctaaaa
     1621 ctccagtcgc ggccatgtac gagcaaacgc agcggcggat gagcggctgc ggtcaagatt
     1681 tcaaatccct ggcgcgtcgc ttttagggta tagacaccca ccgcgttgtc cacgctattt
     1741 tcgtgggggc gaaactgcac atggggacaa agcttgacgc gcacgcgctc atctccctcg
     1801 agtaaagcgt agctcgtcag tgtggtattg tgcccatgca ccatgaaaat tttcttttcg
     1861 acgacgatgc cagcgatctg ataacgccat atcggcacgc cgtcttccag gcgaaattcc
     1921 gccagtgcag cgaagccggg gctctcgctg ctttcgttaa aacccaatcc ggatgacaat
     1981 tcgatgtgcg tgccatcggg caactcgaga cgttcggtaa gttggttgag catcatcacg
     2041 cggccgagcg gcgccgccag cgccgcgatc aataagccgt gataacgccg ggtaatggcg
     2101 ccgagcaacg tgccggaggc gtatccaccc aaaccgttgg tgatcagcca ttcgcgctcg
     2161 gctaaaacct ccggtgccgc cgatccttcg ccgctaaacg gcacacgacg tataacttgc
     2221 ggcgcggcgc gctcggtgac ctgtgggccg ctggaattcg cttgccaatc ggtaaattgc
     2281 gtcatgaatt ggtataaatc agaagcgtaa tgctaggggt aatttcgaa
//
LOCUS       DATIRS010000215         1842 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1098067, whole genome shotgun sequence.
ACCESSION   DATIRS010000215 DATIRS010000000
VERSION     DATIRS010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1842)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1842)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1842
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1098067"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(374..>1842)
                     /locus_tag="VLM90_02735"
     CDS             complement(374..>1842)
                     /locus_tag="VLM90_02735"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ11898.1"
                     /translation="MFYSSKIQPHIAFTDLREWMAEAEKLGELKTVRGASWQEEIGLA
                     TDVVVPPDDGPAVIFDDVPGCPRGFRVIVNAFAGKRRAITFGFPQGLTKQELSDAYFA
                     HYQTNAKHLAPGFVDNGPVFENIVKNNDIDIEKFPTPVWHRDDGGRYIGTGCYSVTMD
                     PDEKWINAGCYRAMIQDKKTVSLLMVPGKHGYMHRQKYFRKGERMPIALVLGGDPLFF
                     FMAGTEHPYGVCEYDVVGGMRRKPVEVVRGKITGLPFPANSEIVFEGFLNNDNRKFEG
                     PFGEWTGYYASDESAQPVLEIEAIYHRNDPIILGVPPIGGGSDEMARYRAIMRSAMLK
                     NELRNAGVPDVTQVWPHEIGASRMLVALAIKQRYPGHAKQVATLASSCGSSVYGLKMV
                     IVVDDDIDVSNLDQLMWATLSRYDPETSVEIVKRMRSTPADPRLTPDQRKIRDFTNSR
                     MIIDATRPFEWGDKFPKVNAPGQEVVRKAREMFGYLLK"
BASE COUNT          358 a          551 c          524 g          409 t
ORIGIN      
        1 cgcgcgccca ttgatcgtgc gaatcacctg gctgataacc gacgatcacg cggatggttt
       61 taccttggta ataattcgct tgcgcgaata ttggttcaag gttcaagggg ttcaagagtt
      121 caagggtcag aataagaaag ccgcaaagag tccgattgaa ccctcgaact tttgaactct
      181 tgaacggctg ttttgattca tttgccatgg cagacctcgt tctctgcgtt gcaattgcta
      241 ccgataaggg tttgccggag cgcgcaaatt tttcgctgcg ccaatttccc gagggcgggt
      301 ttcaaaccac gcccctacaa atccgattcc cttttgtgaa ctttgcgttc tttgcggcca
      361 atcatccgca tctttacttc agcaggtagc cgaacatctc tctcgccttg cgcaccactt
      421 cctggcccgg cgcgttcacc ttggggaact tgtcgcccca ctcgaagggg cgggtggcgt
      481 cgatgatcat gcgcgaattg gtaaagtcgc ggatctttct ctggtccggc gtcaagcgcg
      541 gatcggcggg cgtgctacgc atgcgcttga cgatctcgac ggaggtttcc ggatcgtagc
      601 gcgacaaggt cgcccacatg agctgatcga gattggacac atcgatatcg tcgtcgacga
      661 cgatgaccat cttcaagccg tagacgctgg agccgcagct cgacgccagg gtcgccactt
      721 gtttggcgtg gccgggatag cgctgcttga tcgccagcgc caccagcatg cgcgatgcgc
      781 cgatctcgtg cggccacact tgcgtcacat cggggacgcc ggcgttgcgc agttcgttct
      841 tgagcatcgc cgagcgcatg atcgcgcggt agcgcgccat ctcgtccgag ccgccgccga
      901 tgggcggcac gcccaagata atcggatcgt tgcggtgata gatcgcctcg atttcgagca
      961 ccggctgagc gctctcgtcc gaagcgtagt agccggtcca ttcgccgaaa ggcccttcga
     1021 atttgcggtt gtcgttattg agaaatcctt caaagacgat ttccgagttg gccggaaacg
     1081 gcagaccggt gatcttgccg cgcaccactt ccaccggctt gcggcgcatg ccgccgacca
     1141 cgtcgtactc gcacacgccg tagggatgtt cggtgccggc catgaagaaa aacagcggat
     1201 cgccgccgag caccagtgcg atcggcatgc gctcgccttt gcgaaaatat ttctgccggt
     1261 gcatatagcc atgcttgccc gggaccatga gcaagctgac ggttttcttg tcttgaatca
     1321 tggcgcggta gcagccggcg ttgatccatt tctcgtccgg gtccatggtc acggaataac
     1381 agccggtgcc gatgtagcgg ccgccgtcgt cgcgatgcca taccggcgtc gggaattttt
     1441 cgatatcaat gtcgttattc ttgacgatgt tctcgaacac cggcccgttg tcgacaaacc
     1501 ccggcgccag atgcttcgcg ttggtctgat agtgcgcgaa ataagcgtcg ctcaactctt
     1561 gcttggtcaa gccctgggga aaaccgaaag ttatggcgcg ccgcttgccg gcaaaagcat
     1621 tgacgatcac gcgaaagccc cgcgggcagc ccggcacatc atcaaagatc accgccggcc
     1681 cgtcgtccgg cggcaccacg acatcggtcg ccaagccgat ctcctcctgc cacgacgcgc
     1741 cgcgcacggt tttgagttcg cccaacttct ccgcctctgc catccactcg cgcaggtcgg
     1801 taaaagcgat atgcggttga atctttgaac tgtagaacat gg
//
LOCUS       DATIRS010000216         1728 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1098136, whole genome shotgun sequence.
ACCESSION   DATIRS010000216 DATIRS010000000
VERSION     DATIRS010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1728)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1728)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1728
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1098136"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..507)
                     /locus_tag="VLM90_02740"
     CDS             complement(<1..507)
                     /locus_tag="VLM90_02740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11899.1"
                     /translation="MQYRYISGDSHLEIDSKHWIGRVPAKYRAQAPRLVRQPDGSDMW
                     MIGDKIKRAAAAADLYGGKGRDAYVPFDGRYEGTPGTGSPEQRIAEQERDGIDAEVLF
                     PSQQGGPKFWRRVEDNDAYKALVRAYNGWLAEEYCAVNSLRLIGVGILPLGCQLNDVI
                     DELEYCSKA"
     gene            674..970
                     /locus_tag="VLM90_02745"
     CDS             674..970
                     /locus_tag="VLM90_02745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11900.1"
                     /translation="MRASFAATFLSLLIVTSVDRTDLWAQAPLQGVAIAYSSTGVNYV
                     DLFLGKEKGYFRKKGLEPQLIQMSSNLAITASIAGELDGQAAIGAPSRCWRRWG"
     gene            1280..>1728
                     /locus_tag="VLM90_02750"
     CDS             1280..>1728
                     /locus_tag="VLM90_02750"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ11901.1"
                     /translation="MRTKLFSIVAGMALLGIAPLNAQEYPNKVISMVVPFAAGGPTDT
                     VARLIGVPMTKTLKQQVIVENVGGAGGTIAANRVAKASPDGYTILIHHIGMSTAPALY
                     RKLLYNPMTDFEPIGLINEVPMTLVAKKDFPAKDLKELIAYVKANKE"
BASE COUNT          379 a          457 c          511 g          381 t
ORIGIN      
        1 tgccttgctg caatattcca attcgtcgat gacgtcgttc agttggcagc ccaatggcag
       61 gatgccgacg ccgatcagac gtagagaatt caccgcgcag tattcttcgg cgagccagcc
      121 gttgtaggcg cgcaccagcg ctttgtaagc gtcgttgtct tcgacgcggc gccaaaactt
      181 agggccgccc tgctgcgatg gaaacagtac ctcggcatcg atgccgtcgc gctcctgctc
      241 ggcgatgcgc tgttccgggc tgccggtgcc aggtgtgcct tcataacggc cgtcgaatgg
      301 gacgtaggcg tcgcgaccct tgccaccgta aagatcggct gctgctgcgg cgcgcttgat
      361 tttgtcgccg atcatccaca tatcgctgcc gtccggttgg cgcaccaagc gcggcgcctg
      421 ggcgcgatac ttggccggca cgcggccgat ccagtgtttc gagtcgattt ccaaatgtga
      481 gtcgccggag atgtaacggt attgcatggt ggcctcgatc acctcgaagg cgatactagc
      541 caaatccgct catgctgcca agtgcgcggc gccgtgaaag atggctggac tattcgaagt
      601 tatcattggg atagagctaa aattgcgcgt tcacgctaag gctgaaatag ttttttgact
      661 tgggagccag attatgagag cgagtttcgc ggcaactttt ctatccctgt tgattgtcac
      721 gtcggtagat cgcacggacc tgtgggcgca ggcgccgttg caaggtgtcg ccatcgcgta
      781 ctccagtacc ggcgtcaatt acgtcgatct tttccttggt aaagagaagg gctattttcg
      841 caaaaaaggt ttggagccgc agctcatcca gatgagctcc aatctcgcga tcaccgccag
      901 tatcgccggc gaactcgatg gccaagcggc tatcggggcg ccatccagat gctggcgacg
      961 gtggggttga tgacggagta ggagagacac caaggagcga cgaacgagtt gtacgagtgc
     1021 gaagagcgag ttcaccagta aaacctagtt caaggcagcg cgtgtacctg tgtcggcggg
     1081 tcgattgtcg tttacgcgaa tcgtcgaggc gcttttcccg ggaatgagaa aatttcctat
     1141 gaaaatgccg attctaaccg agttgcgatg gcaccggtgt tgcgctactc ctgggtagat
     1201 ttaagggata atcgctttaa gctcgtctaa accttgtgcc ggcaaaattt gaccgcggca
     1261 attctaagga ggagagatta tgagaaccaa gctgtttagt atcgttgcag ggatggcgct
     1321 gctgggtata gctccgctga acgcccagga atacccgaac aaggttatta gcatggtggt
     1381 accgttcgcc gcaggtggcc cgacggatac tgtggcgcgg ctgatcggcg tgccgatgac
     1441 caagaccctt aagcaacagg tcattgtaga gaatgtcggc ggcgccggcg gaacaatcgc
     1501 cgcgaaccga gtcgcgaaag catcacccga cggctacacg attcttatac atcatatcgg
     1561 catgtccacc gcgcccgccc tttatcgcaa gctgctttat aacccaatga ccgacttcga
     1621 gcccatcggc ttgatcaacg aagtgccgat gacgctggtg gcgaaaaagg actttccggc
     1681 caaggatctg aaggagctga tcgcttatgt taaagccaac aaggagaa
//
LOCUS       DATIRS010000217         2224 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1786398, whole genome shotgun sequence.
ACCESSION   DATIRS010000217 DATIRS010000000
VERSION     DATIRS010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2224)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2224)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2224
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1786398"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(65..502)
                     /locus_tag="VLM90_02755"
     CDS             complement(65..502)
                     /locus_tag="VLM90_02755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11902.1"
                     /translation="MDPKAQVVQLKTQLVSEGHTRFMLAETDLMTLRIHCYAPGIGEN
                     ALHAHTKEDHIFVVLEGIAQFNTERDGQTVLTATKNHAVVLPAGSYYQFCNSGQTPLV
                     MARIGAGPDKADQRLNPDGSAIPGRAHEQGAAKPKLIEGAFFE"
     gene            671..1540
                     /locus_tag="VLM90_02760"
     CDS             671..1540
                     /locus_tag="VLM90_02760"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HSQ11903.1"
                     /translation="MTPLFAEIVAIFSAMGWAIDSVLVRFGLRQSNIFAAMLMSYVVS
                     ITCVWSYLIATTSLDFLASPAMIYYLISGCMQPIFARALFYEGITRIGVARAGPLRGI
                     EPLFAAIIALLVFNEQPGLQVYVGTVLIVASLWLISGKQEHDKPWRYIDALLPIGAAL
                     ISAISQTLRKQALQIIPDPFVAVAMVTTVSLLLLLGFVFATGRTQQLRMHRSSFHFFL
                     GAALVATTAQVANFIALGRGQMSVIIPLLNTTPLFTVFFSALFLRKVETVNLRIIGGA
                     VLMVGGVVLITSR"
     gene            1613..>2224
                     /locus_tag="VLM90_02765"
     CDS             1613..>2224
                     /locus_tag="VLM90_02765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11904.1"
                     /translation="MDSREFAKSLEKQVADFCQNLDANLPAYSFIPLTNDDMRIKVMQ
                     SRLFNEIRAGEIFGGWLKSTPELDVKKTLAEATHEEYEHAEFLEEALRSKGATPHDYQ
                     PLPAQMAMFNAFEGLTDTVERIAAFPMAGEGVADYLIAKSLKAGTVPSWITAPYQKIH
                     AYEEQHDNYPFEILVKYAITAEKQAKAARAVAMSLVLRRAYFDN"
BASE COUNT          473 a          693 c          583 g          475 t
ORIGIN      
        1 caacccgcgc cagcccccac cggcgcgggt tggtccccct cccaaaacca aaaggattcg
       61 gaatttattc gaagaatgcc ccttcgatca gtttgggttt agccgcacct tgctcatggg
      121 cacgaccggg gatcgccgaa ccatcgggat tgagccgctg gtcggccttg tccggaccgg
      181 cgccgatacg cgccatcacc agcggcgtct ggccagaatt gcagaactga tagtaactgc
      241 ccgccggcaa caccaccgcg tgattcttgg tcgccgtcag cactgtttgg ccgtcgcgtt
      301 cggtgttgaa ttgcgctatg ccttccaaaa ccacaaagat atgatcttcc ttggtgtgcg
      361 cgtgcagggc attctcgcca atgccagggg catagcagtg aattcgcagc gtcatcaaat
      421 cggtttcggc gagcatgaag cgggtatggc cctcgctcac cagttgagtt tttaattgca
      481 cgacttgcgc ttttggatcc atagattctc ctttgccgaa tagcgttaaa gaccgccgat
      541 cttaggatag acgcgccatc accgcaagca gcatcgtcaa cacgatcgat gcccacgacc
      601 agatcggagc atcggttgca aatcccgccc gcctcggctt atctgaaagt ctcagacact
      661 gagacttact ttgacaccgc tgttcgctga aatcgtcgcg attttctccg ccatgggttg
      721 ggccatcgat tcggtgctgg tgcgcttcgg cctgcgccaa tccaatattt tcgccgccat
      781 gctgatgagc tatgtcgtct ccatcacctg cgtctggagc tatctgatcg ccacgacctc
      841 attggacttt ctcgcctcgc cggcgatgat ttactacttg atcagtggct gcatgcagcc
      901 gattttcgcc cgcgcgctgt tttacgaagg gatcacccga attggcgtcg cccgcgccgg
      961 tcccctgcgc ggcatcgagc cgctcttcgc cgcgatcatc gcgctgctcg tgttcaacga
     1021 acagcccggc ctgcaagtct atgtcggaac cgttttgatc gtcgccagcc tctggctgat
     1081 ctccggcaag caggagcatg acaagccttg gcgctacatc gacgccctgt taccgatcgg
     1141 cgcggcattg atctccgcga tctcgcagac cctgcgcaag caagcactcc agatcatccc
     1201 cgatccgttt gtcgcggtag cgatggtcac caccgtttcg ctgttgcttt tgttgggctt
     1261 cgtttttgcc accggccgca cacagcaatt gcgcatgcac cgcagcagct ttcacttctt
     1321 tcttggcgcc gcgctggttg ccaccacagc gcaagtcgcc aatttcatcg ccttggggcg
     1381 cggacaaatg tcggtgatca tccccttgct caacaccacg ccgctattca cggtgttttt
     1441 cagcgcgctg tttctgcgca aggtcgaaac cgtcaacctg cgcatcatcg gcggcgcagt
     1501 cctgatggtc ggcggcgtcg ttctgatcac cagccgctaa gcgttgacct ggcgaaacca
     1561 aattgatagc caggaaccga tccggaagtc gatccgcaga caggagagcc ccatggatag
     1621 ccgtgaattc gccaaatcgc tggaaaaaca ggttgccgat ttctgccaga acctagacgc
     1681 gaacctgccg gcctacagct tcatcccgct caccaacgat gacatgcgta tcaaagtcat
     1741 gcagagccgg ctgttcaacg aaatccgcgc cggcgagatc ttcggcggct ggctgaaaag
     1801 cacgcccgag ctggacgtaa agaaaaccct cgccgaagcg acccacgaag agtacgagca
     1861 tgctgagttt ctcgaggaag cgctgcgcag taaaggcgcc acgccccacg attaccaacc
     1921 gctaccggca cagatggcga tgttcaatgc ttttgaagga ctaaccgaca cggtggaaag
     1981 aatcgccgcg ttcccaatgg ccggcgaagg cgtggccgat tatcttatcg ccaaaagcct
     2041 gaaggcggga accgtaccga gctggataac cgccccgtat caaaaaatcc acgcatacga
     2101 agaacaacat gacaactatc cgtttgagat cttagtcaaa tacgcaatta ccgcggagaa
     2161 acaagcaaaa gccgcccgcg ccgtggcgat gagcttagtc ctgcgccgcg cctatttcga
     2221 taat
//
LOCUS       DATIRS010000218         2001 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_606752, whole genome shotgun sequence.
ACCESSION   DATIRS010000218 DATIRS010000000
VERSION     DATIRS010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2001
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_606752"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..960
                     /locus_tag="VLM90_02770"
     CDS             <1..960
                     /locus_tag="VLM90_02770"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11905.1"
                     /translation="DGEYRRLNFQDSFVESVSGFIPKKQTLQFQESRTLGGEALQRWQ
                     PDSAKTDPALQYWRPFIGQLRLAHNRPLAEWRYAAQLTEKPVKITLIATDRICENFHR
                     QNFQTVYANADEYLKDVIAIERTIVQELAEAGCPYVQMDAPSYTAYVDPRSLDKMKAS
                     GIDPIAQMERSMAADNAVIAGIDDLVFGIHLCRGNVRSMWHREGAYDAIAERLFNGLD
                     HRRFLLEYDTERAGGFAPLRFVPKSKTVVLGLVSTKVPKLETADELKRKIDEASRFIP
                     LEQLALSPQCGFSSNIVGNLITEDDQWRKLELVQKVATEVWGI"
     gene            1073..>2001
                     /locus_tag="VLM90_02775"
     CDS             1073..>2001
                     /locus_tag="VLM90_02775"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ11906.1"
                     /translation="MKNGFKAMDSDMHVMEPCDLWQKYIDKKFLNRAPVGLNRHKRDL
                     GVQVDGKIMPRAPEKSNPALGPIRERILNEKYPEEEARDFDNIAQVRAMDKEGLDVAI
                     LYPSRGLFVLAVDGLDPDLAAAIARAYNDWMHDFCKIAPERMYGAGIVAPHDVSSAVE
                     ETRRVVKELGFRSVLMRPNHVNGRMWSDPYYNPLWEECQKLGIPVGLHEAGRVYLPQP
                     ALSQFIPSFTMFNTLSFPMANMFACADMIYGGVMERFPKLKVAFLEGNCAWLPWLLWR
                     MGEYAELTGTAEHPEMKLEPLEYFQRQCWGAVE"
BASE COUNT          436 a          605 c          568 g          392 t
ORIGIN      
        1 gacggcgagt atcgccgcct gaattttcaa gatagtttcg tcgaatcggt ttctggtttc
       61 atcccgaaaa agcagacgtt gcaatttcag gagagccgca ccctgggagg ggaagcgctg
      121 cagcgctggc agccggactc ggcgaagacc gatcccgcgc ttcaatactg gcggccgttt
      181 attggtcaat tacggctcgc tcacaatcgc ccgctcgcag aatggcgcta cgcggcgcag
      241 ctcacggaga aacccgtcaa gatcacattg atagccacag atcgcatctg cgagaacttt
      301 catcggcaga atttccaaac cgtctacgcg aatgcggatg aatatctcaa agacgtcatc
      361 gcgatcgaac gaacaatagt tcaggaattg gccgaggccg gttgcccgta cgttcagatg
      421 gacgcgccga gctataccgc ctacgtggac ccgcggtcgc tcgataaaat gaaagcctcg
      481 ggcattgacc ccatcgcgca aatggagcgc tcgatggccg ccgataacgc ggtgatcgcg
      541 ggaattgacg atctcgtctt cggcatccat ttatgtcgcg gcaatgtgcg cagcatgtgg
      601 caccgcgagg gcgcttacga cgccatcgcc gagcggcttt tcaacggcct cgatcaccgg
      661 cgcttcctgt tggaatacga cactgagcgc gccggcggtt ttgcgcccct gcgcttcgtg
      721 ccaaagagta agacggtcgt tcttgggctc gttagcacca aagttcccaa gttagaaacg
      781 gcggatgaac tgaagcgcaa gatcgacgaa gccagtcgtt tcatcccgct cgaacaacta
      841 gccctcagtc cccagtgcgg cttttcctca aacatcgtcg gcaacctcat caccgaagat
      901 gatcaatggc gcaagctgga acttgtccaa aaagttgcca ccgaggtttg gggcatttag
      961 cgtttcccga cagttttgcg cgccaaccgt tttcagccga cggccaaatt gacacccgcc
     1021 cctgcccttt gttatgcgaa gagcaggcta gaggattctt gaggagagcg ttatgaaaaa
     1081 tgggttcaag gcgatggact ccgacatgca cgtgatggag ccctgcgatt tgtggcagaa
     1141 gtacatcgac aagaagtttc tcaatcgcgc gcccgtcggc ctcaaccgcc acaagcgcga
     1201 tctcggcgtg caagtcgacg gcaagatcat gccgcgcgcg ccggagaaat cgaatcccgc
     1261 gctggggccg attcgcgagc ggattctcaa cgaaaaatat cccgaggaag aagcgcgtga
     1321 cttcgacaac atcgcccagg ttcgcgccat ggacaaggaa ggcctcgacg tggcgattct
     1381 ctacccaagc cgcggcttgt tcgtgctcgc cgtcgacggc ctcgacccgg atctcgccgc
     1441 cgccatcgcc agagcctaca acgactggat gcacgacttc tgtaagatcg ctcccgagcg
     1501 catgtacggc gccggcatcg tcgcgccgca cgatgtctca tccgccgtcg aagaaacccg
     1561 ccgcgtcgtc aaggagctgg gctttcgcag cgtgctcatg cgccccaacc acgtcaacgg
     1621 ccgcatgtgg agcgatccct actacaatcc gctgtgggaa gagtgccaaa agcttggcat
     1681 ccccgtcggc ttacacgaag ctggacgcgt ctacctgccc cagccggcgc tgtcgcagtt
     1741 cattcccagc ttcaccatgt ttaacacgct gtcgtttccg atggcgaaca tgttcgcctg
     1801 cgccgacatg atctacggcg gggtaatgga gcggtttccg aaattgaaag tggccttttt
     1861 agaaggcaac tgcgcctggc ttccctggct gctctggcgc atgggcgaat acgccgagct
     1921 gaccggcacc gccgagcacc cggaaatgaa gctcgaaccg ctggagtact ttcaacgcca
     1981 gtgctggggc gcggtggaat g
//
LOCUS       DATIRS010000219         1774 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1393453, whole genome shotgun sequence.
ACCESSION   DATIRS010000219 DATIRS010000000
VERSION     DATIRS010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1774
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1393453"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..787
                     /locus_tag="VLM90_02780"
     CDS             <1..787
                     /locus_tag="VLM90_02780"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HSQ11907.1"
                     /translation="VLTIIVLAVILLGICTATESAAVGALGALYLAVLVKYPRSCGWW
                     SLAGGVIGVALGIPRGDIAALVVSSSLGAVFLGTVVPLAHYLPKSSELRRNLQEAVFL
                     TAKTTAMVCWLFIGSALFSSVFALHGGQGLIERWVLGMNLSPLGFLFVSQMIIFLLGW
                     PLEWTEIIVIFCPIFVPLIGHFNVDPILFGTMVAVNLQAAFLSPPVAMSAFYLKGVSP
                     KHVTLNQIFAGMMPYMLIVVLCLICMYAWPGMTLWLPEFLYGN"
     gene            863..>1774
                     /locus_tag="VLM90_02785"
     CDS             863..>1774
                     /locus_tag="VLM90_02785"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HSQ11908.1"
                     /translation="MDLSDLHLLSASEAARLLRDGVISSEQLVEACLTQIHAVDDNIQ
                     AWAFLDPEYALTQARALDQHRLEGKPTGPLHGVPIAIKDIFDTADMPTEYGSPIHAGR
                     TPSRDATAVALLRGAGAVIMGKAVTTEFAFLNPGKTRNPHNREHTPGGSSSGSAAAVA
                     AQMVPLAIGSQTAGSTIRPAAYCGVVGFKPTHGLISRHRASPLSRTLDHVGLFARTID
                     DIALLAEQLVAYDENDPDTQPRARIPFTAISAEEPPLAPMFAFIKTPMWQRSDDETKE
                     GFVEIVEQLGAQAEEVELFPSAHEGWQW"
BASE COUNT          304 a          502 c          538 g          430 t
ORIGIN      
        1 cgtgctcacg atcatcgtgt tggctgtgat cctcctgggt atctgcaccg ccaccgagtc
       61 ggcggctgtg ggcgccttgg gcgcgctcta tttggccgtg ctggtgaaat atccacggag
      121 ttgcggctgg tggagcttgg ccgggggcgt tattggcgtc gcactcggca ttccccgagg
      181 cgacatcgca gcgctcgtgg tttcgagttc gctcggcgcg gtttttctcg gcaccgtggt
      241 accgctggcg cactacttgc cgaagtctag cgagctgcgc cgtaatcttc aggaagcggt
      301 atttcttacc gccaagacca cggcgatggt ctgttggcta tttatcggtt cggcgctgtt
      361 ttccagcgta ttcgcgttgc atggcggcca gggactgatc gaacgctggg tgctcggcat
      421 gaatttatcg ccgctcggct ttctttttgt ttcgcagatg attatttttc tgctcggctg
      481 gccgctggag tggaccgaga tcatcgttat tttctgtccg atctttgttc cgctgatcgg
      541 ccattttaat gtcgacccga ttcttttcgg caccatggtc gcggtcaatc tgcaggcggc
      601 atttttatcg ccgccggtgg cgatgtcggc tttttacttg aaaggcgtgt cgcccaagca
      661 tgttacgctc aaccaaatat ttgccggcat gatgccgtat atgctgatcg tcgttctctg
      721 tctgatttgc atgtacgctt ggccgggcat gactttgtgg ctgccggagt tcttatacgg
      781 aaactaaaga gttcaaatcg ttcaagtcgt tcaaacagtt caaaacgacc gattgagccg
      841 aacccaaagt gatgcgagtg tcatggactt atctgatctt catctactct cggcgtcgga
      901 agccgcgcgg ctgttgcgcg acggcgtgat cagttcggag caactggtcg aggcctgttt
      961 gacgcaaatt catgctgtcg atgacaacat tcaagcttgg gcatttctcg atccggaata
     1021 tgcgctgacg caagcgcgcg ctctcgatca acatcgtctc gaaggcaagc cgaccgggcc
     1081 gttgcacggt gttcccatcg ccatcaagga tattttcgac acggccgaca tgccgacgga
     1141 gtacggttcg ccgattcacg ccgggcgcac gccgtcgcgc gacgccaccg cggtggcttt
     1201 gctgcgtggt gctggggcgg tgatcatggg caaagcggtg acgactgagt ttgcctttct
     1261 aaaccctggg aaaacccgca acccgcataa ccgagagcat acgcctggcg gctcgtcgag
     1321 cggttcggcg gcggcggtgg cggcgcagat ggtgccgctc gccatcggca gtcagaccgc
     1381 cgggtcgacg attcggccgg cggcttactg cggcgtcgtc ggtttcaagc ccactcatgg
     1441 tttgatttcg cgccatcgtg cttcgccgct ttcgcgcact ctcgaccacg tcggcttgtt
     1501 cgcccggacc attgacgaca tcgcgctcct cgccgagcag ttggtcgcct acgacgaaaa
     1561 cgatcccgac acccagccgc gggcgcgtat tccgtttacc gctatttccg ccgaagagcc
     1621 gccgctggcg ccgatgttcg cttttatcaa gacgccgatg tggcaacgga gcgatgatga
     1681 aaccaaagaa gggttcgtcg agatcgtcga gcagttgggc gcgcaagcgg aagaagtgga
     1741 gctgttcccg tcggcccatg agggatggca atgg
//
LOCUS       DATIRS010000220         1644 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_606781, whole genome shotgun sequence.
ACCESSION   DATIRS010000220 DATIRS010000000
VERSION     DATIRS010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1644)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1644)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1644
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_606781"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..908
                     /locus_tag="VLM90_02790"
     CDS             <1..908
                     /locus_tag="VLM90_02790"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HSQ11909.1"
                     /translation="KRSRTGNFAPTDSTILVQGETGTGKELIARAIHHLSARSERTRV
                     KVNCAAIPTGLLESELLGHEKGAFTGAIAQRVGRFELAHRGTLFLDEVGDIPLELQPK
                     LLRVLQEQEFERLGSSRTVHVDVRLVAATNADLTQKVADGQFRADLYYRLNVFPVTIP
                     PLRERREDIPLLVRYFAQKYARRMKRPIDNVPVKAMTALSEYHWPGNVRELENFIERA
                     VILSRGAELQIPLAELKQRTNRHSSAASNGFATLENAEREHIVRALGESKWVIGGAAG
                     AANRLGMKRTTLQSRMRKLGITRPI"
     gene            1096..1260
                     /locus_tag="VLM90_02795"
     CDS             1096..1260
                     /locus_tag="VLM90_02795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11910.1"
                     /translation="MKIERIFAAVLSAGGANLIARVLSQGVEPALAGTVIDWSASRIR
                     TAIKRLRSQL"
BASE COUNT          344 a          479 c          488 g          333 t
ORIGIN      
        1 gcaaaaggtc gcggacgggc aatttcgcgc cgaccgattc gacgatcctg gttcaaggcg
       61 aaaccggcac cgggaaagag ttgatcgcgc gtgcgattca tcatctgagc gcccgcagcg
      121 agcgtacccg ggtcaaggtc aactgcgccg ccatcccaac cgggctgctg gagagcgaat
      181 tgttaggcca tgaaaagggc gctttcaccg gcgccattgc gcaacgcgtc ggccgcttcg
      241 agctggccca tcgggggacg ctgtttctcg acgaggtcgg cgatattccg ctcgaattgc
      301 agcccaagct cttgcgggtt ttgcaggagc aagaattcga acggttgggc agctcgcgca
      361 ccgtccatgt ggatgttcgc ctggtggccg cgaccaatgc cgacctcacg caaaaggtcg
      421 cggacgggca atttcgcgcc gacctttatt atcgcctgaa tgttttccca gtgacgattc
      481 caccgctgcg cgagcggcgc gaggacattc ccttgctggt gcgctacttc gcgcaaaaat
      541 acgccaggcg gatgaaaaga ccgatagaca acgttccggt caaggcgatg accgcactgt
      601 cggaatatca ctggcccggc aacgttcgcg agctggagaa ttttatcgaa cgcgcggtga
      661 ttctttcgcg cggtgctgag ctgcaaattc cccttgccga actgaaacaa agaaccaacc
      721 gccactcgag cgctgcttcg aatggtttcg cgaccctcga aaatgccgag cgggagcata
      781 tcgtgcgcgc cctcggtgag agcaaatggg tgatcggtgg cgctgccggc gccgccaatc
      841 gcttgggcat gaagcggacc acgctgcaat cgcgcatgcg aaagctcggc atcactcgtc
      901 ccatctgacg ccggtatttc ggcgcgtgcc gacaggtcgt cacatttatt tcggcgccaa
      961 tcgcgacgcc gaaacccgca gtgcacttaa ctcccttagt tctatacatt tacatagtcg
     1021 aggcgacact cggcgttgct ggcatgcgcc ttgccattat ttcgactcag cgaaacaggg
     1081 aaggcgatcg aggcgatgaa gatcgaaagg atttttgccg cggtattgtc cgcgggcggg
     1141 gcaaatctaa ttgcccgggt gctaagccag ggagtcgaac cggcgctggc cgggacggtg
     1201 atcgattggt cggcaagccg catcagaacg gcgattaaac ggcttcgctc acagctttaa
     1261 atctgaacat tccccgtggc tagctgcggg cacaaaattg ccggggtttc caaagggggt
     1321 tgaacatccc ctttggtcgc gagcggggtt cataccccga tcgcgaaatg cccggttgat
     1381 ttgaactagc acagtgttta gctcgggcac cgcacccgaa cgcgcgccgc catatttttt
     1441 ggacagtaag cgctaatcag cgatcctgtc aaccttatat cggcttgcgc gagagttgcg
     1501 ggactgcatt ggtaaactga aagaccccct gctcgaacgc gagtggttgt gaatccgtcg
     1561 cttcgaagct gacccttgct tccgtcgtta cggcgcagag cctgcgccgg catgccaacc
     1621 ctctcttagc ctaaacgcga ggga
//
LOCUS       DATIRS010000221         1686 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1884552, whole genome shotgun sequence.
ACCESSION   DATIRS010000221 DATIRS010000000
VERSION     DATIRS010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1686)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1686)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1686
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1884552"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..232)
                     /locus_tag="VLM90_02800"
     CDS             complement(<1..232)
                     /locus_tag="VLM90_02800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11911.1"
                     /translation="MKALALYSLAAALYVAGGVFMKHSAGLTHWLPALALVALFGAGA
                     LIQAWAMKQEALGSSYVVVLGLEALLAVIAGYF"
     gene            complement(286..>1686)
                     /locus_tag="VLM90_02805"
     CDS             complement(286..>1686)
                     /locus_tag="VLM90_02805"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HSQ11912.1"
                     /translation="KMLDDGDKEMQERAVRSLTGIGQAAVPLLIQPSKEASRTWQLNG
                     ARVLAAVRGKAALKGLLQMLSAGTDETNKVICDLMTPALREMETKELDGFYDEVEAFA
                     AKLDVKQQRPAAVSTMRLLGQLGRPQARRWLFKYIGAEHHPAVRAHALVGLLRCLREQ
                     ELRKDEYAKLLPILEEAEYSEVTRLVIDLLDAHDLPEDSRSLLAKLMQSPHSDLQKFA
                     LRKMGDVATPASIRTLVEELGDPDYRKRDVAASSLRRIPEARNVLLKDLAACQDPSKA
                     WSIAELLPSFEGKWRQDTLDGLWKRLHQAIAGEERIQTAFLHVLKSADVASVYDRLAD
                     QGVKLLKTKKYKEAVGFLTPLKDFSEFKAEHRYALALAQLKLHAHTLATHRQHPAVEL
                     LTGLYRGSAYPVFETLRKEKSLAPEDLFALGFSLVERAGQERGLGIDLLEHVAEKFPR
                     NKIGKNAKNKLKLIGV"
BASE COUNT          328 a          517 c          489 g          352 t
ORIGIN      
        1 ggaagtaacc ggcgattacc gcgagcagcg cctcaagccc gagcacgacg acgtaactcg
       61 atccgagcgc ttcctgtttc atcgcccagg cctggatcag cgcaccggcg ccgaagagcg
      121 cgaccagcgc cagcgccggc aaccagtgcg tcagtccggc ggaatgtttc atgaacacgc
      181 cgccggcgac gtacaaagcc gcggcgagag aatagagcgc cagcgctttc atctgcgtat
      241 gactatgagg aagagaatca ggttcagtcc gccaactagg gtgggctaaa caccgatcaa
      301 cttgagtttg ttcttggcgt tcttgccaat cttgttgcgc gggaatttct ccgcgacatg
      361 ttcgagcaga tcgatgccca aaccgcgttc ttggccggcc cgttcgacca ggctgaaacc
      421 cagggcaaaa agatcttccg gagccaggct tttttctttt ctcaaagttt caaaaaccgg
      481 ataggcagag ccgcgataaa gaccggtcaa gagctccacg gctggatgtt ggcgatgggt
      541 cgccagcgtg tgcgcatgca gtttcaactg cgccagtgcc aacgcatagc gatgttcagc
      601 tttgaactcg ctaaaatctt tgagcggtgt caagaatcct accgcttctt tgtatttctt
      661 ggtcttaagc agtttgacgc cttggtccgc cagccggtca tagaccgacg ccacatcggc
      721 gcttttgagg acatgcagga acgccgtctg aatccgctct tcgccggcga tcgcttggtg
      781 caaccgcttc cacaggccgt cgagcgtgtc ttggcgccac ttgccttcga aggacggcag
      841 cagctcggcg atgctccacg ccttgcttgg atcttggcaa gcggcgagat ctttgagcaa
      901 aacatttcgc gcttcgggaa tcctgcgcag cgagctcgcc gccacgtcgc gcttgcgata
      961 gtccggatcg ccgagctcct cgactaaggt gcgaatgctc gccggcgtgg cgacgtcgcc
     1021 cattttgcgc agggcgaatt tttgcaaatc cgagtgcggg ctctgcatca gtttggccaa
     1081 gagcgagcgg gaatcctcgg gtaaatcatg ggcgtcgagc agatcgatga ccagccgcgt
     1141 cacctcggag tattcggctt cttcaagtat cggcagcagt ttggcgtact cgtctttgcg
     1201 caactcttgc tcgcgcaggc aacggagcaa gccaaccaaa gcatgggcgc gcaccgccgg
     1261 atgatgctcg gcgccgatgt atttgaaaag ccagcggcgc gcttgcggcc ggcccagttg
     1321 gccgagcagc cgcatggttg aaaccgccgc cggccgttgc tgtttgacat cgagcttggc
     1381 cgcaaaggct tcgacttcat cgtagaagcc atcgagttcc ttagtctcca tctcgcgcag
     1441 cgccggcgtc atcaagtcgc atatgacttt gttggtctcg tccgtgccgg cgctgagcat
     1501 ttgcagcagc cccttaagcg ccgccttacc gcgcaccgcg gcgagcactc gcgccccgtt
     1561 caactgccag gtccgcgaag cctccttaga cggctggatc aacaacggca ccgccgcttg
     1621 gccgatgccg gtgagcgaac gcacggcgcg ctcctgcatc tctttgtcac cgtcgtcgag
     1681 catctt
//
LOCUS       DATIRS010000222         1918 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_213487, whole genome shotgun sequence.
ACCESSION   DATIRS010000222 DATIRS010000000
VERSION     DATIRS010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1918
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_213487"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..902
                     /locus_tag="VLM90_02810"
     CDS             <1..902
                     /locus_tag="VLM90_02810"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ11913.1"
                     /translation="VVYANMDVTAMKPLADGFMRRYPGVKATTVHFSGAAIITRIESE
                     SRVGKPLSDVVLSGQLGVLSSIERRIAARYRSPERESLRDGFKDKDGLWTTYMTNVMV
                     SAYNTRLVKKEELPRSVEDLLKPRWKNKLVMDSQSYVWFGTMMQYLGEDNGLRFMKRL
                     NEQNLQHSRGRRLMTQLLAAGEHEIAVETNLNSVLSLSRQGAPLAFAPIQPYFLSPSL
                     VFMSANAPHPFAGALFTDYLLSEEGQKIIVTTNRMPAHPKVKSPESQLLDGQDVRMPD
                     IFDIGRRYQAIGNRYREIFPGAR"
     gene            1015..>1918
                     /locus_tag="VLM90_02815"
     CDS             1015..>1918
                     /locus_tag="VLM90_02815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11914.1"
                     /translation="MAKITLGLPDHPRCQAIIDGKVGIEGYELEVDPNFVSSGERHYK
                     YLHGEWDVGEVSAASLMRAIEKGQPLLAIPVFFERGPRQRNIYHCDKHLKHPSELKGK
                     KFGCFRYGATAVVWARGYLLDAHGIKTTDMEWFVSGREVFIGHELPVKVQRIEPPPPF
                     GEEKLVLSKMLNAGELHGAIVPGDNGYAGFFGGGETPKMMSAYAGVKPLFDNNDEIIA
                     YVKKTGINPIMHVLSIRREVAQRDPDLPAKLTRAFMEARSLAAQYMSGEERDGYERER
                     AVLGEDPYAYVMGENEKRTLAAMNR"
BASE COUNT          439 a          577 c          534 g          368 t
ORIGIN      
        1 cggtcgtcta tgccaacatg gatgtgaccg cgatgaagcc cctcgccgac ggcttcatga
       61 gaagatatcc cggcgtcaaa gccaccaccg tgcatttctc cggcgccgcg atcatcacga
      121 gaatcgaatc cgaaagccgc gtcggcaagc cgttgtcgga tgtcgtcttg agcggccaat
      181 tgggtgtgct ctcttcgatc gaaaggcgca tcgccgcgcg ttaccgctcg ccggaacggg
      241 aaagcttgcg cgacggattc aaagacaaag acggcctgtg gactacctac atgaccaacg
      301 tcatggtcag cgcttacaac acccgtctgg tcaaaaaaga ggagctgccg cgcagcgtcg
      361 aagatctctt gaagccccgc tggaagaaca aactggtgat ggacagccaa tcctacgtct
      421 ggtttggcac catgatgcag tacctcggcg aagacaacgg cctgcgcttc atgaagcgct
      481 tgaacgaaca gaacctgcag cactcgcgcg gccgccgctt gatgacgcaa ctgctcgccg
      541 ccggcgagca tgagatcgcc gtggagacca atctcaattc ggtgctcagt ttgagcaggc
      601 aaggcgcgcc gctagccttc gcgccgattc aaccctactt tctcagtccg agcctggtct
      661 tcatgagcgc caatgcgccc caccccttcg ccggcgcgct gtttaccgac tacctgcttt
      721 cggaagaagg ccagaaaatc atcgtcacca ccaatcgcat gccggctcat cccaaagtta
      781 aatccccgga gagccaatta ctggacggcc aggacgtgcg catgccggat atctttgata
      841 ttggacgaag ataccaggcg atcggcaacc gctaccggga gatttttccc ggcgcgcgct
      901 gagcaattcc aaattacaga ttccatattc cagattggca gaatcggaat ttactttgta
      961 atttggaatc tggaatttgg aattgttgag ttagagctgg aaagggaaca atcaatggca
     1021 aaaatcaccc tcggattacc ggatcaccct cgctgccagg cgatcatcga cggcaaggtc
     1081 ggcatcgaag gctacgaact cgaggtcgat cccaacttcg tctcctccgg cgagcgccac
     1141 tacaaatatc ttcatggcga atgggatgtc ggcgaagtct cggcggcgag cttgatgcgc
     1201 gccatcgaga aggggcagcc attgctcgcc ataccggtgt tcttcgagcg cggtccgcgc
     1261 cagcgcaata tttatcactg cgacaaacat ctaaaacatc cgtcggagct caaaggcaaa
     1321 aagttcggct gcttccgtta cggcgccacc gcagtggtct gggcgcgcgg ctatttgctc
     1381 gacgcccatg gcatcaagac caccgacatg gagtggttcg tttccggccg cgaggtgttc
     1441 atcggccatg aattgccggt gaaggtccag cgcatcgagc cgccgccgcc cttcggcgaa
     1501 gagaagctgg tgctctcgaa gatgctcaac gcaggcgaac ttcacggcgc catcgtgccg
     1561 ggtgacaacg gctacgccgg cttttttggc ggcggcgaga cgccgaaaat gatgtcggct
     1621 tatgccggcg tcaaaccgct cttcgataac aatgacgaga tcatcgccta cgtcaaaaaa
     1681 accggtatca atccgatcat gcacgtcttg tcgatccgcc gcgaggtcgc ccagcgcgac
     1741 cctgacctgc ccgcaaaact aacacgggcc tttatggagg cccgcagcct tgccgcgcaa
     1801 tacatgtccg gcgaagagcg cgacggctat gaaagggagc gcgcggtcct cggcgaagat
     1861 ccctacgctt acgtcatggg cgagaacgaa aagcgcactc tggcggccat gaaccgct
//
LOCUS       DATIRS010000223         1583 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_901722, whole genome shotgun sequence.
ACCESSION   DATIRS010000223 DATIRS010000000
VERSION     DATIRS010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1583
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_901722"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..197
                     /locus_tag="VLM90_02820"
     CDS             <1..197
                     /locus_tag="VLM90_02820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11915.1"
                     /translation="AAKNCMIQPTRELVKKYLPKGTRLKKTAGTHWSCVDSSKARRML
                     GFKPRHLWQDYLAEGREQKY"
     gene            360..1382
                     /locus_tag="VLM90_02825"
     CDS             360..1382
                     /locus_tag="VLM90_02825"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ11916.1"
                     /translation="MIRSLLTAIVVIVWLFAVTQAQAQSDFFQGKTIRIIVGYSPGGG
                     YDALARMLSRQMPKHIPGHPTILVENMAGAGSLLAANHIFKVAKPDGLTMGHFSGGFV
                     YSQVMGQPGIELDMQKFVFVGAVARDESAIAVTKASGVNTMERWFAAKTPLKMGTTGP
                     GAFGTDNVLKVIKVALNLPMQIISGYKGTADMRLAVESGELDGTTWGWDSMRGTWQKS
                     LESGVVSVVLQSVPKAFADLPKVPLAIDLAKTAEAKQLIEYGIHFPSKITKTLALPPG
                     TPADRALILQKALQETVKDPEFIAEADKAKIGLAPVTVDEMKKTVDGVFKLDPALLAK
                     LKTILF"
BASE COUNT          342 a          433 c          470 g          338 t
ORIGIN      
        1 cggcggcgaa gaactgcatg atccaaccga cgcgcgagtt ggtgaaaaaa tatctgccca
       61 agggcacgcg cttaaaaaaa actgccggca cgcactggag ctgcgtcgat tcgtccaagg
      121 cgcggcgcat gcttggcttc aagccgcggc atctgtggca ggattattta gccgaggggc
      181 gcgagcagaa gtattgaagc gttgcgtggc gtcacttcca ttctgtttcc gaggcgtcgc
      241 cccattttcc gcacggagat gagatttttt atttccgctt gacggaggac cggcagttca
      301 actagctttg ccgcagttgc tcattcgttt atctttggcc gacggtaagg agatccacca
      361 tgatcagaag cttgctgacc gcgatcgtcg tgattgtctg gctattcgcc gtaactcaag
      421 ctcaggccca aagcgatttt ttccaaggta aaaccatccg tatcattgtc ggctattcgc
      481 ccggcggcgg ttacgatgcc ttggcgcgca tgctgtcgcg gcagatgccg aaacatattc
      541 ctggccatcc gaccattctg gtcgaaaaca tggctggcgc cggtagcttg cttgccgcca
      601 atcatatttt caaagtcgcc aagcccgacg ggctgaccat gggccatttc agcggcggct
      661 ttgtttacag tcaagtcatg ggccagccgg gcatcgagct cgatatgcag aaatttgtct
      721 tcgtcggcgc ggtggcgcgg gatgaaagcg ccatcgccgt gaccaaggcg agcggcgtca
      781 atactatgga gcgctggttt gccgctaaga cgccgttaaa aatgggcacc accgggccgg
      841 gcgctttcgg caccgacaat gtgctgaaag tcatcaaggt ggcgctcaat ctaccgatgc
      901 aaatcatctc gggctacaaa ggcaccgccg acatgcgcct ggccgtggag agcggcgagc
      961 ttgacggcac gacttggggt tgggactcca tgcggggaac ttggcagaaa tcactcgaat
     1021 caggcgtggt gtccgtggtg ctgcaatccg tgcccaaggc gtttgccgat ttgcccaaag
     1081 tgccgctggc gatcgatctg gccaagacag cggaggccaa acaattgatc gagtacggca
     1141 ttcactttcc gagcaagatc accaagactc tagccctgcc gccgggcact cctgccgatc
     1201 gcgcgctgat cctgcagaag gcattgcagg agacggtgaa ggatcccgag ttcatcgccg
     1261 aggcggacaa agccaagatt ggactcgcgc cggtgaccgt cgatgaaatg aaaaagaccg
     1321 tcgatggcgt cttcaagctc gatcccgctc tgctcgccaa gctgaagacc attctcttct
     1381 aagaaatcgc gcggggcttc gaaaggattt tgcacatggc gcagcgcagg cgttgcttgg
     1441 gccggttcat cgcagcgttg acaattcttt ggggcgttgg cgaggcatcg gcgcagcaag
     1501 atgaaaaagc cgtggccgat ttctatcgtg gcaaacagat tagcatcatt atcggttcgg
     1561 ggcccggagg cacttatgac att
//
LOCUS       DATIRS010000224         3110 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_213499, whole genome shotgun sequence.
ACCESSION   DATIRS010000224 DATIRS010000000
VERSION     DATIRS010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3110
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_213499"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..313)
                     /locus_tag="VLM90_02830"
     CDS             complement(<1..313)
                     /locus_tag="VLM90_02830"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HSQ11917.1"
                     /translation="MSSRRNATPDDGKPRRGCNGSAGFTLIEVVLAITIFALMGGVLY
                     GAFSLGHTAVEKSAASFNRNQKTRSIGDLLATYLRSAYPYRESIQEQAIFFAGECERV
                     TF"
     gene            complement(310..708)
                     /locus_tag="VLM90_02835"
     CDS             complement(310..708)
                     /locus_tag="VLM90_02835"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HSQ11918.1"
                     /translation="MGRGKDGFTLLEVLIAMTIVGLGVVTLLQIFSLGLRLASRSNVQ
                     TDAIAQGARVMDELLARPNLRDGSENGTVAPATRWRSQVETQRDTAPSLNLGSNWELK
                     EVAVEMTVADGERERRVELKTLRLVRKANP"
     gene            complement(717..1184)
                     /locus_tag="VLM90_02840"
     CDS             complement(717..1184)
                     /locus_tag="VLM90_02840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HSQ11919.1"
                     /translation="MTLPAGKDNRGFSLLELVLVLVVMGISMAIVVPNIGRRMQEREV
                     RSSALGLAAVARELRSRALVDGIAQQLIVSMPHNTYLVPKVREVHLPEDVRIASIAGG
                     EAMERDTKRFYFFPNGSSLGGEIVIASSASSISYLIRLEPLTGKIEVSRGGQS"
     gene            complement(1159..1572)
                     /gene="gspG"
                     /locus_tag="VLM90_02845"
     CDS             complement(1159..1572)
                     /gene="gspG"
                     /locus_tag="VLM90_02845"
                     /inference="COORDINATES: protein motif:HMM:TIGR01710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system major pseudopilin GspG"
                     /protein_id="HSQ11920.1"
                     /translation="MKNQAGFTLVELIVVVIIIGLLAGLVVPQFIKQEEKATAKAAKA
                     QIELFGTALDTFRLDVGRYPTSQEGMAALMQKPGGVDRWDGPYLKKDLPPDPWGKPYV
                     YKSPGDHGVYDIISYGADGAPGGDGNNRDITSWER"
     gene            complement(1593..2813)
                     /locus_tag="VLM90_02850"
     CDS             complement(1593..2813)
                     /locus_tag="VLM90_02850"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HSQ11921.1"
                     /translation="MAFYQYRAADQAGKVVEGVMEADAEQSVVSRLREMGCVPLRIAM
                     PSERAVGAVRQQRPLFEKRKVSQQQLLQFTRELATLLHAGLPLDRSLSILGNLFEGGE
                     FTKVMRSLVEAVRAGKSLAVSMGEHPQIFPRIYVNMIRAGEAGGILESVLRYLTEYLE
                     STTALKEEIKSALIYPIILATAAGASLIVLFLFVIPKFAALFHDNRKAIPWITKVVID
                     FSQMLSQYGWLVLLVVVAAVAGVILYVKNPEGRSEWDRLCLKAWLIGDLVRKFETARF
                     SRTLSALLRGGVPLLEALGTVQGVVGNRLLARAIGQVQVRVREGKGMARPLSESGLFP
                     VLALNMIAVGEESGKLDGMLTEVASFYDQEVRRSTKRLTSLLEPVLILGMGLIIAVVV
                     ISMLMAIFSINEIQ"
     gene            complement(2904..>3110)
                     /locus_tag="VLM90_02855"
     CDS             complement(2904..>3110)
                     /locus_tag="VLM90_02855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11922.1"
                     /translation="YLGRVGVFELLPVTADICKLINQKADANVIRNLAVQQGMRLLRE
                     DAWDKVRQGMTTLAEVVRVTREEG"
BASE COUNT          687 a          956 c          846 g          621 t
ORIGIN      
        1 cgaaagtcac acgttcgcac tcgccggcga aaaaaatcgc ttgctcttga atcgactcgc
       61 ggtagggata agcggatcgg agataggtcg ccagcaggtc gccgatggaa cgggtctttt
      121 ggttgcgatt aaaactcgcc gcggattttt ctaccgccgt gtggccgagg gaaaaagcgc
      181 cataaagcac cccgcccatg agcgcaaaga tagtgatcgc caacactact tcgatcaagg
      241 tgaaaccggc ggagccattg cagccgcgtc gcggcttgcc atcgtcagga gtcgcattcc
      301 gtctcgaact catggattgg ccttgcgcac cagccgcaac gtttttagtt ccacgcggcg
      361 ttctctctca ccgtcagcca cagtcatttc gacggcgact tctttgagct cccagttgct
      421 gcccaagttt agtgacggcg cggtatcgcg ctgagtttca acctgcgagc gccagcgagt
      481 ggccggcgcc accgtaccgt tctccgatcc gtcgcgcaga ttggggcggg ccagcaactc
      541 gtccatgacc cgcgcgcctt gggcgatggc gtcggtctgc acgttgctgc gcgacgccaa
      601 acgcaggccg agggaaaata tttgcagcaa agtcaccacg cctaaaccga cgatggtcat
      661 ggcgatgagc acttcgagca atgtaaagcc gtctttaccg cgacccatgg aagttctcac
      721 gactgaccgc cacgactgac ctcgatctta ccggtgagcg gttccagacg aatcagatag
      781 gaaatcgaac tggcgctact ggcgatgacg atctcgccgc cgaggctgct gccgttggga
      841 aagaaataaa atcgcttggt gtcgcgctcc atcgcttcgc cgcctgcgat ggacgcgatg
      901 cgcacatcct cgggtagatg gacctcgcgg acctttggca ccagataggt attgtgcggc
      961 atgctgacga tcaactgctg ggcgatgccg tcgactagcg cgcggctacg cagctctcgc
     1021 gccaccgcgg ccaagccgag cgccgaactg cgcacttcac gctcctgcat gcgccggccg
     1081 atattgggca cgacgatcgc catggagatg cccatgacca ccagcaccag cacgagctca
     1141 aggagcgaga atccccggtt atctttccca gctggtaatg tcacggttat tgccgtcgcc
     1201 cccaggggcg ccgtcggcgc cataggaaat aatatcgtag acgccatgat cccccggact
     1261 cttgtagaca tagggcttgc cccaaggatc cggcggcagg tcttttttta gatagggacc
     1321 atcccagcgg tcgaccccgc cgggcttctg catcaaggct gccatacctt cctggctggt
     1381 tggataacgc ccgacgtcga ggcgaaaggt gtcgagcgcc gtgccgaaca attcgatctg
     1441 cgccttagcc gctttggccg tggccttttc ttcctgttta ataaattgcg gcaccaccag
     1501 cccagccaat aggccgatga tgatgaccac gacaatcagt tcgacgaggg taaacccggc
     1561 ttggttcttc atagcttggt taagacgacg gttcattgta tttcattgat gctgaatatc
     1621 gccatcaaca tggagatgac gaccaccgcg atgatcagtc ccatccccaa tatcaatacc
     1681 ggttccagca acgaagttaa tcttttcgtc gatcgtcgga cctcttgatc gtagaaagac
     1741 gccacctcgg tcaacatgcc atccagtttt cccgactcct cgccgaccgc gatcatgttc
     1801 agagccaaga ccgggaataa accgctctcg ctcaacggcc gcgccatgcc cttgccctcg
     1861 cgcacccgca cctgcacctg gccgatggcc cgggccaaaa gccggttgcc gacgacgcct
     1921 tgtaccgtgc ccaaggcttc gagcaacggc acgccgccgc ggagcaacgc ggataacgtc
     1981 cgggaaaacc gcgcagtttc aaattttcgc accaaatcgc caatcagcca agctttcaag
     2041 cataaacgat cccattcgct tcgaccctcg ggatttttca cgtaaagaat caccccggcg
     2101 accgcggcaa cgaccaccaa caataccagc cagccgtatt gggacagcat ctggctaaag
     2161 tcgatgacca ctttggtgat ccagggaatc gctttgcggt tgtcatggaa cagcgcggcg
     2221 aactttggaa tgacgaagag aaacaagacg atcaacgatg cgccagccgc ggtggctaaa
     2281 ataatcgggt agattaacgc cgatttgatc tcctctttga gcgcggtggt gctttccaag
     2341 tattcggtta aatagcgcag gacgctttcc aaaatgccgc cggcctcgcc ggcgcggatc
     2401 atgttgacgt aaatgcgggg aaatatctgc gggtgttcgc ccatcgacac cgcgagggat
     2461 ttgccggcgc gcaccgcttc gaccaaggag cgcatgacct tggtaaattc accgccttcg
     2521 aacagattgc cgaggatcga taaactgcgg tcaagcggca acccggcgtg gagcaaggtg
     2581 gcgagctcac gggtgaactg cagcaactgc tgctggctga ccttgcgttt ttcgaacagc
     2641 ggccgctgct ggcgtaccgc gccgaccgcg cgttcagacg gcatggcgat gcgcagcggc
     2701 acacagccca tctcgcgcag gcgcgacacc acgctctgct cggcatcggc ttccatcacg
     2761 ccttcaacca ctttgccagc ttggtcggcg gcccgatatt ggtaaaacgc catggcgatt
     2821 ttttacgtta cgatcagacg acttaggaac aaaaatatca tgaccggcaa tcacccacta
     2881 ccgatcaaag ggactgccac gaactaacct tcttcgcggg tcacacgcac cacctcagcc
     2941 aaggtggtca tcccctggcg aactttatcc caggcgtctt cgcggagaag gcgcataccc
     3001 tgctgaacgg cgagattgcg gatgacattg gcatcggcct tttggttgat caatttacat
     3061 atatccgccg tcaccggcag cagctcgaag acaccgacac ggcctaaata
//
LOCUS       DATIRS010000225         2280 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1786705, whole genome shotgun sequence.
ACCESSION   DATIRS010000225 DATIRS010000000
VERSION     DATIRS010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2280
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1786705"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            226..1758
                     /locus_tag="VLM90_02860"
     CDS             226..1758
                     /locus_tag="VLM90_02860"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ11923.1"
                     /translation="MASKETNLSRRRFLQHSTTLSLGALIGPAFGGNAFAASRERVVI
                     YQGVSLDSLHPYGYSGGGINGIWLHLIEPLIVMDYTRQKYVGVLADSWEFQGKRWIFQ
                     LRKNIRFHNGAPFTSKDVAYAIERMKTDKRSLQGGDILELEVETPDDFTVVFNTKQPL
                     SLLLDRLDTRYIISKAAAEKYGDQADNYAIGTGPYKFVSWQRGGNLVLARNDDYWGAK
                     AEIKEVILRGVKEEAARVAGLLSGQADVVSNLPIEEIDRVAKHPRVRVEKIPGFRMYF
                     VAMNVAHKPFDNKLVRQAVNHAIDPAPIMKHVFSGNGQVLNGPLAANMTGFDPAMKRY
                     GHDPKKARELLAQAGYPNGFEIKLHFSPDRHLKGREVCEVIGNQLAKVGIKIELVGQE
                     YAVYWGKDGVNGGKLPFYYAGRTASDADTFYDQYFHTGITKRIGYSNPEVDKLIEEQQ
                     RTADQKKRVTILQQAGRLIMEDAPFLPLYTLSEIYGVARNVIWKGTPDNRILAVEMKI
                     RG"
     gene            complement(1851..>2280)
                     /locus_tag="VLM90_02865"
     CDS             complement(1851..>2280)
                     /locus_tag="VLM90_02865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11924.1"
                     /translation="CRSDGGGMFHYFDGAAHVPGLLQDQAQMGSALVRAYEVPGRAEY
                     LGRARQLAEFILTELKNSAGGFYDIRAQDAASLQLRLTLIEQNGAAASFFLSLAQATK
                     DAKYRDAAHWALSAVAGDFNQYGVHAAPFGNALAQLRGLE"
BASE COUNT          554 a          689 c          621 g          416 t
ORIGIN      
        1 tatccaagcg actgcgataa aaatcacttt gccgtgtgaa ctgcgctggt gctataagcg
       61 gaaaagagga ttggccgcaa agaacacata gaacacaaag tggatttcgg gagaaatccg
      121 atgtaggggc gtatggcata cgccctgggt ggcggggcgc gcttgcacag caacaaccct
      181 cattcgcgcc acgcactaaa gatcaacaaa taaaggagca ctgccatggc tagcaaagaa
      241 accaacctaa gtcgccggcg ctttcttcaa cacagtacca cgctcagcct cggggctctg
      301 atcgggccag cctttggagg aaatgcgttc gccgcatcca gagagcgggt cgtcatttat
      361 caaggcgtca gcctcgactc gctccatccc tacggctaca gcggcggcgg catcaacggc
      421 atctggctcc atctgatcga gccgctgatc gtcatggact acacccggca aaaatatgtc
      481 ggcgtgcttg ccgactcatg ggaattccaa ggaaagcgct ggattttcca gcttagaaaa
      541 aacatccgct ttcacaacgg cgcgccattc acatcgaaag acgtggccta tgccatcgag
      601 cgcatgaaaa ccgacaagcg cagccttcaa ggcggcgaca tcctggagtt agaagtggaa
      661 acgcccgacg atttcaccgt ggttttcaac accaagcagc cactctcgct gctgctcgac
      721 cgcctggaca cgcgctatat catcagcaaa gccgccgcgg aaaaatatgg cgaccaggcc
      781 gacaactacg ccatcggcac cggcccctat aaatttgtca gctggcagcg cggcggcaac
      841 ctggtcttgg cgcgcaacga cgactactgg ggcgccaaag cggagatcaa ggaagtcatc
      901 ttgagaggag taaaagaaga ggcagcgcgg gtcgccggcc tgctgtcagg ccaggccgac
      961 gtggtcagca acctgcccat cgaagaaatc gatcgagtag cgaaacatcc gcgtgtccgg
     1021 gtcgagaaga ttcccggctt tcgcatgtat ttcgtcgcga tgaacgtcgc ccataagcct
     1081 ttcgacaaca agttggtgcg ccaagcggtc aaccacgcca tcgatccggc gccgataatg
     1141 aaacatgtct tttccggtaa cggccaagtg ctcaacggcc cgctggcggc gaacatgacc
     1201 ggcttcgacc cggcgatgaa acgctatggc cacgatccca agaaagcccg cgagctgctc
     1261 gcccaggccg gctatccaaa cggcttcgaa atcaagctgc atttctcgcc cgaccgccat
     1321 ctcaagggcc gagaagtctg tgaagtgatc ggcaatcagt tggcaaaagt cggcatcaaa
     1381 atcgaattgg tcggccagga gtacgccgtt tactggggca aggatggcgt caacggcggc
     1441 aagctgccct tttactacgc cggccgcacc gcctccgacg ccgacacttt ctacgatcaa
     1501 tactttcaca ccggcatcac caaacgcatc ggctacagca acccggaggt cgacaaactc
     1561 atcgaagagc aacagcgcac cgccgatcag aaaaaacgcg tgacgatctt gcagcaagct
     1621 ggccgcctga tcatggaaga cgcgcccttc ctgccgctct acacgctctc ggaaatttac
     1681 ggcgtcgcga gaaatgtcat ctggaaaggc acgcccgaca accgcatcct cgcggtggag
     1741 atgaagataa ggggataacg gggaattgca gtgttggagt agtggagtac tggagtactg
     1801 gagtgacggg ttcctcggtc ttcccaacac tccattactc catcactcct ttactccagt
     1861 cctcggagtt gcgccagcgc atttccgaac ggcgcggcat gtacgccgta ctgattaaaa
     1921 tcaccggcga cggcactaag cgcccagtgc gccgcgtcgc gatacttggc gtccttcgtc
     1981 gcttgagcca atgagagaaa gaaggaagcc gcggcgccgt tctgttcgat caaagttaac
     2041 ctaagttgga gcgaagccgc atcctgcgcg cgaatatcgt agaacccgcc ggccgaattt
     2101 ttcagttctg ttagtatgaa ctcagccaac tgccgtgctc ggcccaaata ctctgcgcgt
     2161 ccggggactt cgtacgcccg caccagcgcg ctgcccatct gcgcttgatc ctgaagtagc
     2221 cccggcacat gcgccgcgcc gtcgaagtag tgaaacatcc cgccgccatc gctgcggcag
//
LOCUS       DATIRS010000226         1605 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_114862, whole genome shotgun sequence.
ACCESSION   DATIRS010000226 DATIRS010000000
VERSION     DATIRS010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114862"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1509
                     /locus_tag="VLM90_02870"
     CDS             <1..1509
                     /locus_tag="VLM90_02870"
                     /inference="COORDINATES: protein motif:HMM:NF012447.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid ammonia-lyase"
                     /protein_id="HSQ11925.1"
                     /translation="RGLLTIADIVAIAEGSASASLSDAPEFRAMIARGADFLDRLLRE
                     EGTIYGVTTGYGDSCTVTIQPELVAELPRHLYTFHGCGLGEYLSPAQTRAVIATRLAS
                     LCKGFSGVSVELLEQLARLLQSEILPRIPSEGSVGASGDLTPLSYLAAVMCGEGEVWC
                     DGAAAPAAPALIEAGIAPLQLLPKEGLAVMNGTAVMTALACLAYARAAYLTRLVTRIS
                     ALASFALDGNAEHFDAALFAVKPHAGLQRVAAWLREDLPSRAVPDNGKRLQDRYSIRC
                     APHVIGVLADALDWMRESIENELNSANDNPIIDGAGERVLHGGHFYGGHIAFAMDSMK
                     NAVANLADMLDRQVALLVDSRYNNGLPANLSGVEGPRSAINHGLKALQISASAWTAEA
                     LKLTMPASVFSRSTECHNQDKVSMGTIAARDCLRVLELTEQVAAASLITVRQGVWLRR
                     RLKPAVAPSAGLQLMLDALSVDIPVVLEDRRLEADLRLLLERIRGRAWKLYE"
BASE COUNT          290 a          467 c          507 g          341 t
ORIGIN      
        1 aggggcctgc ttaccatcgc cgatatcgtc gctattgctg aaggttcagc ttcagcgagt
       61 ttgtccgatg cgccggaatt tcgtgccatg attgcgcgcg gcgccgactt tctggatcgt
      121 ttgttgcgcg aagagggcac aatctacggc gtgacaacag gttacggcga ctcctgcacc
      181 gtgacgattc agccggagtt ggtcgccgaa ttgccgcgcc atctctacac cttccacggc
      241 tgtggtttgg gtgagtattt aagcccggcg cagacccgcg ccgtgatcgc gacccggctt
      301 gcctctttat gcaagggctt ctccggtgtc agcgtggagt tgttggagca actggcgcgt
      361 ttgctacaaa gcgaaatctt gccgcggatt ccatccgaag ggtccgttgg cgctagcggc
      421 gatctcacgc cgttgtctta tcttgccgca gtaatgtgcg gcgagggcga agtttggtgt
      481 gacggcgcag cggcgccggc ggcgccggca ttgatcgaag caggcatcgc accgctgcag
      541 ttactgccca aagaaggcct cgcggtcatg aacggtaccg cggtgatgac cgcgttggct
      601 tgtttggcat acgcgcgcgc cgcctacctt acccgcctgg tgacgcgcat ctcggcgttg
      661 gcctcattcg ctctggatgg caatgccgag cattttgacg cggcgctgtt tgccgtaaaa
      721 ccccatgccg gtttgcagcg cgtcgccgct tggctgcgcg aggatttacc gagtcgcgcg
      781 gtaccggaca acggcaaacg gttgcaggac cgctattcga ttcgctgcgc gccccatgtg
      841 atcggtgtgc ttgccgacgc cctcgactgg atgcgcgagt ccatcgaaaa cgagctcaac
      901 agcgccaacg ataacccgat tatcgacggg gccggagagc gggtgttgca tggcggccac
      961 ttctatggcg gccacatcgc cttcgccatg gatagcatga aaaatgccgt cgccaatttg
     1021 gcggatatgc tcgaccggca ggtggcgctg ctggtggata gccgttacaa caacggtctg
     1081 ccagcaaatt tatccggcgt ggaagggccg cgatctgcga tcaatcacgg cctcaaggcg
     1141 ctgcaaatca gcgcatcggc gtggacggcg gaggcgctca aattgacgat gccagcgtcg
     1201 gtattttccc gttccaccga gtgccacaac caagataagg tgagcatggg cacgatagcc
     1261 gcgcgcgact gtttgcgcgt gctcgagttg accgaacaag tcgccgccgc atcgttgatt
     1321 accgtgcgcc agggagtttg gctgcgccgc cgcttgaagc cggcggtagc gccgtcggcg
     1381 gggctgcaac tgatgctcga cgcgctgagc gtagatatcc ccgttgtcct cgaagaccgc
     1441 cgactcgaag cggatctgcg cttgctcttg gagcgcatcc gtggtcgcgc ttggaaattg
     1501 tatgagtaag gcgccgagcc gctggttcgc cgagaccgaa gcccaagtgc agtttttcga
     1561 tctcgatccg atggaaatcg tttggcatgg ccactatgtc aaata
//
LOCUS       DATIRS010000227         2556 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_901789, whole genome shotgun sequence.
ACCESSION   DATIRS010000227 DATIRS010000000
VERSION     DATIRS010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2556
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_901789"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(146..1813)
                     /locus_tag="VLM90_02875"
     CDS             complement(146..1813)
                     /locus_tag="VLM90_02875"
                     /EC_number="1.2.1.79"
                     /inference="COORDINATES: protein motif:HMM:NF006916.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinic semialdehyde dehydrogenase"
                     /protein_id="HSQ11926.1"
                     /translation="MSAAVRPWCRISDARSTTRRHANLASNPGVSTTKRIFLQPSTIL
                     ANQMSATIQVRNPATLELIQELPVASPNEVALAITRARQAQSIWQQTSFAERAKLLYR
                     LRDLLLDEGDRLADILTGETGRPRAEVYGNELFYLCNAIGAWAKHSERYLRRQKLSPS
                     FPLVKAKKAYFTYAPRGVIGIISPWNFPLTLTLGEALPALMAGNAVVIKPSELTPLSA
                     LFGAELAAKAGFPKDLLQIVVGDGGTGAALIDHADMIAFTGSVDTGKQVMRRAADRLI
                     PVSLELGGKDPMIVLKDANMERAAGACVWGALMNCGQTCTSIERVYVEAPIYQAFVDN
                     VTARVKAIRQGTSTEAVDIGAMTSAAQLNKVAAQVDEARAKGARIVTGGRRNPNLPGY
                     YYEPTVLVDVDHSMSIMAEETFGPVIPIMQVDSPEEAVRLANDSRYGLSASIFSHDRS
                     AAVKLADQLDSGAVCVNDSLVNFIIPEAPMGGRKDSGFGYRHGAAGIRKFCQEKTIVV
                     DRFGLKEEFPWYPASEKKARQVRHLLNLLCHSGWSHKLRALKGLIRS"
     gene            complement(1785..>2556)
                     /locus_tag="VLM90_02880"
     CDS             complement(1785..>2556)
                     /locus_tag="VLM90_02880"
                     /inference="COORDINATES: protein motif:HMM:NF009466.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ11927.1"
                     /translation="LKDKIALVSGGGTGIGRAIAIKLAKNGAKVAIASRNRDQLNHVA
                     DELTQFGLTVQPVPMNVRIKADVERAVADVVSQWGAIHILVNNAGISGLSRMNDADDS
                     KWYEIVDTNLHGMYLLTKAVLRHMPDQAGGRVINISSVLGKFGVPGYTAYCTTKHGMI
                     GFGRALALEIVSRGITVNTICPGWVDTEMATQGINETAKSLGIPPEEFKAQAVAAVPI
                     RRFLAAEEIAELVAYVASDAARGITGQAMNICGGQTMV"
BASE COUNT          502 a          704 c          764 g          586 t
ORIGIN      
        1 cgaatcactg cgcctacgcg ggtggcgcct tctttggcga taaaacttgg cagatctttg
       61 gccatgaaca ttctcctatt aagtttattt acctgggaaa actatccact ctacttagat
      121 gaatcgccgc gtgagtgcaa gcgagctagc tgcgaataag ccccttgagt gcgcgcagtt
      181 tgtgcgacca acccgagtgg caaagtaggt tgagcagatg gcgcacttgg cgggcttttt
      241 tctcgctcgc ggggtaccaa gggaattctt ccttgaggcc gaaacggtcg acgacgatgg
      301 ttttttcctg gcagaacttg cgaatgccgg cggcgccatg acggtagccg aagccgctgt
      361 ctttgcggcc gcccatgggc gcttcgggta tgataaagtt aactagactg tcgttgacgc
      421 aaaccgcgcc gctgtcaagt tgatcggcaa gcttcaccgc cgccgaccga tcgtgtgaaa
      481 agatgctggc gctaagtccg taacgcgaat cattggccag tcgaacagct tcttccgggc
      541 tatcaacctg catgattgga atcaccgggc cgaaggtttc ttcggccatg atgctcatgg
      601 aatgatcgac atcgacgagt accgtcggct cgtagtagta gcccggcaag ttgggattgc
      661 gccggccgcc ggtgacaatc ctggcgcctt tggcgcgtgc ttcatcgact tgtgcggcaa
      721 ctttatttag ctgcgccgcc gatgtcatgg cgccgatatc gacggcctcg gtgctggttc
      781 cctgccggat cgctttgacc cgggcggtga cgttgtcgac gaacgcctga tagattggcg
      841 cttcgacgta gacgcgttca atcgaggtgc aggtttggcc acagttcatc aatgcgcccc
      901 agacgcaggc gccggccgct cgttccatat tggcgtcctt caggacgatc atgggatctt
      961 tgccgcccaa ctccaaagag actggaatca gccgatcggc ggcgcggcgc atgacctgtt
     1021 tgccggtatc gacgctgccg gtaaaggcga tcatatcggc atgatctatc agggcggcgc
     1081 cagtgccgcc gtcgccgacg acgatttgta gcaggtcttt gggaaagccg gccttggcgg
     1141 ccaattcggc gccgaagagc gcggataggg gagttagctc ggaaggttta atcaccacgg
     1201 cattgccggc catcaatgcc ggcagggctt cgcccaaggt cagggtcagg ggaaagttcc
     1261 atggactaat gatgccaatc accccgcgcg gcgcgtatgt gaagtatgct ttcttggcct
     1321 tcaccaaggg aaagctcggc gagagttttt gtcgccgaag gtagcgctca gagtgcttgg
     1381 cccaggcgcc tatggcgttg cacaggtaga atagctcgtt gccgtagact tcagcgcgcg
     1441 gccggccggt ttcgccagtc aaaatatcgg cgagtctatc gccttcgtcg agcagcaagt
     1501 cgcgcagccg gtagaggagt ttggcgcgct cggcaaaact agtttgttgc cagatcgact
     1561 gtgcctgccg ggcgcgcgtg attgccaggg cgacttcgtt tggcgatgcc accggcagtt
     1621 cttggattaa ctccaaggtg gcaggattgc gaacttgaat ggttgcgctc atttgattgg
     1681 ccaaaatagt tgagggctgg agaaaaatcc ttttagttgt cgagactcct gggttacttg
     1741 ctaagttcgc atggcgtctg gtggtactac gagcgtcgga aattctacac catggtctga
     1801 ccgccgcaga tattcatcgc ctgtccggtg atgccgcgag cggcgtccga ggcgacatag
     1861 gcgaccagtt cggcgatctc ctcggctgcc aagaaccgtc ggatcggcac cgcggcgacc
     1921 gcttgtgctt tgaattcttc cggcgggatt ccaagcgact tggccgtttc attgattccc
     1981 tgagttgcca tttcggtgtc gacccagcca gggcaaattg tgttgacggt gatgccgcgg
     2041 ctgacgattt ccagggccaa cgcacgaccg aagccgatca tgccatgttt ggtcgtgcaa
     2101 taggcggtgt acccagggac gccgaatttc cccaacaccg atgagatatt gatcactcta
     2161 ccgccggcct gatctggcat atggcgcagc accgctttgg tgagcagata catgccatgc
     2221 aaattggtat cgacgatctc gtaccacttg gagtcgtcgg catcgttcat gcggctcaga
     2281 cctgaaatgc cggcgttgtt cactaaaata tgaattgccc cccattggct gactacatca
     2341 gcgacggcgc gctcgacatc ggctttgatc cggacattca tcggcacggg ctgcaccgtc
     2401 aatccgaact gggttagctc gtcggcgacg tggttgagct gatcgcggtt gcgtgaagcg
     2461 atggcgacct tggcgccatt tttggccaat ttgatcgcga tggcgcggcc aattcccgta
     2521 ccaccaccgc tcacaagtgc aattttatcc ttaagc
//
LOCUS       DATIRS010000228         4604 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_705292, whole genome shotgun sequence.
ACCESSION   DATIRS010000228 DATIRS010000000
VERSION     DATIRS010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4604)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4604)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4604
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_705292"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..796)
                     /locus_tag="VLM90_02885"
     CDS             complement(<1..796)
                     /locus_tag="VLM90_02885"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: protein motif:HMM:NF012760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0071951 - conversion of methionyl-tRNA to
                     N-formyl-methionyl-tRNA [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HSQ11928.1"
                     /translation="MRIILIGQAAFAEKTLEKLVGKGEKVVAVYCPPDPPNGKFDPVK
                     QNAIDLHIEVRQPKSFKAPEVCDEFVALNADLAILAFVTQIVPQQVFSVPKLGSICFH
                     PSLLPKYRGASAINWALIKGESVTGLSLFWVDKGIDTGPILLQKEVKIEPDDTTGSLY
                     FNKIFPLGIEAIGEAVDLIKAGNPPRIVQDESKANYDPICDDAHGKIDWSKPAQEVYN
                     LIRGCDPQPGAHTTYNGKLVRIFDARLQTGNNAAAAGQVTGIGGEEI"
     gene            complement(862..1389)
                     /locus_tag="VLM90_02890"
     CDS             complement(862..1389)
                     /locus_tag="VLM90_02890"
                     /inference="COORDINATES: protein motif:HMM:NF025953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HSQ11929.1"
                     /translation="MLIEYKGKRPHVSPTAFIAPTAVIIGDVTIGDEASIWWGAVLRS
                     DQNANPIVIGARTSVQDNCVIHSGEAPTIIEEDCTIGHGAIMEGPLVKRGAIIGMNVT
                     LLEHVEIGEEALIGAGSVVTPHTIIPPRVLAAGAPAKVKKEITGEALHWIKMGSTTYV
                     NLCRSYKGGDFKIIG"
     gene            1598..2665
                     /locus_tag="VLM90_02895"
     CDS             1598..2665
                     /locus_tag="VLM90_02895"
                     /inference="COORDINATES: protein motif:HMM:NF024739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ11930.1"
                     /translation="MKYFAVVAVSLWPLIGAVDVALAQTREATLAALGKLPAAERQAR
                     LVEGAKKENGLVWYSSTTAEDALALSKKFNEQHPTIKINHFRSSSEKLLERILAESRA
                     NAFKADIVTLPELELSLMIRRKLLLRYEAVENSFYPAETKDPRGFWTGLYTSAWVPGY
                     NTKQVAKDQAPRTYKDLLNPRWKGNMAMDNEPFNWYVISLNFLEKRDGKEAAANYMKQ
                     LAAQQLQWRKGHSLIGQLMAAGEFPLAAELQVHTVERAKATGAPVEWSVLDGVIPISK
                     VGAAVTSTGNSIYTSALFFDFLLSRGGMETIRASRRIPTRPDVTAPYLKPYKLIPFEP
                     QAIDDFDKYVTLFRDTFKPGN"
     gene            2838..4262
                     /locus_tag="VLM90_02900"
     CDS             2838..4262
                     /locus_tag="VLM90_02900"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ11931.1"
                     /translation="MISPSSTHNSETIRRLVLINSILGVTIAGASARVFMISVPTLAT
                     ALDTDMLGISWALIVYQMAGIGLGVICGRLGDIHGHHKTYGIGMWVMALASLLCGFSQ
                     NIWQLILFRFLQGIGGAIIQSSGRTLAFKAMPAGSEGKAQGLMAMSHQLGFFIGPPIG
                     GLIIDLVHWRGVFFLLFVPSLAGAALCMMTGRAAAAEPMRRQAIDYRGALLLFALTVL
                     ATLLLDQKVAQAVGTGSELLLGSVFFAALWLFLVHEKRAPSPLVDLSIFSVKVFGYGS
                     VGLLFCNINQGLSTFITPFYLQQVLNLSPTFMGAIFLVPSLLSMVLSPVSGALTDRIG
                     SRLLLIVGVLVLMASFIIGAYLRSDSHWLLPTILLALTGIGSAFFNTASQAAMIRALP
                     KENWGTAIGIINGVFGLGHMLGISLSGIFLTLAFRYYTGDAGATPDPANSSLFVAAMN
                     LTYVFALALAVIPLFTSTKIKGRE"
BASE COUNT          868 a         1237 c         1378 g         1121 t
ORIGIN      
        1 tgatttcttc tccaccgatg ccggtcacct gtccggctgc cgcggcatta ttgccagtct
       61 gtagccgcgc gtcgaagatc cgtaccaact tgccattgta ggtcgtgtgc gcgccgggtt
      121 gcggatcgca gccgcggatt aggttgtaga cttcctgcgc cggtttggac cagtcgattt
      181 tgccatgggc gtcgtcgcag atggggtcgt aattggcttt ggattcgtct tggacgatgc
      241 gcggcgggtt gccggctttg atgaggtcca ccgcttcacc gatcgcttcg atgcccaggg
      301 gaaagatttt gttgaaatac aacgatccgg tggtgtcgtc cggctcgatc ttcacttcct
      361 tttgcaagag gatcggcccg gtgtcgatgc ctttgtcgac ccaaaatagc gaaagtccgg
      421 tgaccgattc gcctttgatc aaagcccagt tgatggcgct ggcgccgcga tacttgggca
      481 aaagcgacgg atgaaagcag atgctgccga gttttggcac gctgaaaact tgctgcggga
      541 cgatctgggt gacgaacgcg agaattgcta gatcggcgtt caacgcgacg aattcgtcac
      601 acacttccgg cgctttgaag gatttaggct ggcgcacctc gatgtggaga tcgatggcat
      661 tctgttttac cgggtcgaat ttgccgttgg gcggatcggg cgggcaatag accgcgacca
      721 ctttctcgcc tttgccgacg agtttttcca gagtcttttc ggcaaacgcc gcttgtccga
      781 tcaatattat tcgcatttgg tgaaactccg aaatagtaga gctagcgcgt tacgaagacg
      841 agccacgatc acgagttctc gttagccgat gattttaaag tcgccgccct tgtagctccg
      901 gcatagattg acgtaggtgg ttgagcccat cttgatccag tgcagcgctt cgccggtaat
      961 ttccttcttg accttggcgg gcgcgccggc agcgagcact cgcggcggga tgatcgtgtg
     1021 cggcgttacc acgctgccgg cgccgatcag ggcttcttcg ccgatctcga catgttcgag
     1081 cagtgtgacg ttcatgccga tgatcgcgcc gcgcttgacc agcggacctt ccatgattgc
     1141 gccgtggccg atggtgcaat cttcttcgat gatcgtcggc gcttcgccgg aatgaatcac
     1201 gcagttgtct tgcacgctgg tgcgggcgcc gatgacgatg ggattggcgt tttgatccga
     1261 gcgcaagacc gcgccccacc agatgctcgc ttcatcgccg atggtgacat cgccaatgat
     1321 cactgcggtg ggcgcgataa acgccgttgg agaaacatgg ggccgtttgc ctttgtattc
     1381 gatgagcatg aagagcgaac ctccgtagat aagtcacgat attggacgtg cccggggaaa
     1441 tcaagattgt tggtgtaatg tcgccagtgt ggattgactc gattggtaaa attgttaatg
     1501 ctttgccatc tttgcagacc ctcaacctag gcctcttccg catgccggtc gaggggaaag
     1561 attaggagag cggtcgatac ctattggagg ttagattgtg aaatattttg ctgtcgttgc
     1621 ggtttcgctt tggccactca tcggtgcagt ggacgtcgcg ctcgcgcaga cccgcgaggc
     1681 gactctcgcg gcgctgggaa aacttcccgc cgccgagcgc caggcgcgtt tggtcgaggg
     1741 ggcgaagaag gagaacgggc tggtttggta ctcgagcacg acggcggaag atgcgctggc
     1801 gctgagcaaa aagttcaatg agcaacatcc gacgatcaag atcaatcact ttcgttcgtc
     1861 aagtgaaaaa ttgctcgaac ggattctcgc cgaatcccgc gccaatgctt tcaaagccga
     1921 catcgttacc ttgcccgagc tggaactgtc gctgatgatc cggcgcaaac tgttgctgcg
     1981 ctacgaagcg gtagagaatt ctttctatcc cgccgagacc aaagatccgc gtggtttctg
     2041 gaccggactg tacacctcgg cgtgggtgcc gggctacaac accaagcagg tggccaagga
     2101 tcaggcgccg cggacttaca aagatctgct caaccccagg tggaagggca acatggcgat
     2161 ggataacgag cctttcaact ggtacgtgat ctcgctcaat tttttagaaa agcgcgacgg
     2221 caaggaggcc gcggccaact acatgaagca actggcggcg cagcagttgc aatggcgcaa
     2281 aggccattcg ttgatcggcc agctgatggc ggcgggcgaa tttcccctcg ccgccgagct
     2341 gcaagtgcac accgtggaac gcgccaaagc gactggcgca cccgtcgaat ggtcggtgct
     2401 cgacggcgtg attccgattt cgaaagtcgg cgcggcggtc accagtaccg gcaacagtat
     2461 ttacacttcg gcgctgtttt ttgattttct cttgtcgcgc ggcggcatgg agacgatccg
     2521 cgcgagccgg cggattccga cgcggccgga tgtcacggcg ccgtacttaa agccgtacaa
     2581 gctcatccca ttcgagcccc aggcgatcga cgatttcgac aaatacgtga cgttgttccg
     2641 cgataccttc aagccgggaa attaaaatac tggacactgg agaatgcaaa attgacaacg
     2701 ccggtcggag ttaagcgcgt gagtgactct tggcgttgag ttggtctcaa tttcttccac
     2761 ggcgtggcgc gggtagaaag cctttggttt gctgaggttt aactattgcg ccgctctgca
     2821 tttgccgcta ccgacccgtg atttcaccgt cttcgactca taacagcgaa accattcgcc
     2881 gtctggttct gatcaattcc atcttgggtg tgaccatcgc gggagcttcc gcgcgggtct
     2941 tcatgatctc ggtgccgacg ctggcaacgg cgctcgatac cgacatgttg ggcatctctt
     3001 gggcgctgat tgtttaccag atggcaggta tcggcctggg cgtgatctgc ggccggctgg
     3061 gagacattca cggccaccac aagacctacg ggatcggtat gtgggtgatg gcgctggctt
     3121 cactgctctg cggcttttca caaaatatct ggcagttgat actgttccgc tttctccagg
     3181 gtatcggcgg cgcgataatt caatcttcgg gacgcacgct ggcttttaaa gcgatgcccg
     3241 ccggctccga aggaaaagcc caagggttaa tggcgatgtc ccatcaattg ggcttcttta
     3301 tcggtccccc tatcggcggg ctgatcatcg atctggtgca ttggcgcggg gttttttttc
     3361 tcctgtttgt cccgagtctg gcgggcgcgg ctttgtgcat gatgacgggg cgcgccgcgg
     3421 ctgccgaacc aatgcgccgg caggcgatcg attaccgcgg cgccttgctg ctcttcgcct
     3481 tgacggtact cgcgacgttg ttgcttgatc aaaaagtcgc ccaggcggtg ggcaccggca
     3541 gcgagctgtt gttggggtcg gtatttttcg ccgcgctgtg gctttttctt gtccacgaaa
     3601 agcgcgcgcc cagtccgctc gtcgatctat cgattttctc ggttaaagtt tttggctatg
     3661 gctcggtggg gctgttgttc tgcaacatca accagggcct gtccaccttc atcacgcctt
     3721 tttatctaca acaggtgctc aacttatcgc cgacgttcat gggcgcgatt tttctcgtgc
     3781 cgtcgttgtt gagcatggtg ttgtcgccgg tgagcggcgc tctcaccgac cgcatcggtt
     3841 cgcgcttgct gttgattgtc ggcgtgctgg tgctgatggc gagctttatc atcggcgcct
     3901 acctgcgcag tgattctcac tggctgctgc cgacgatttt gttagctctt accggtatag
     3961 gttcggcgtt tttcaacacg gcatcgcagg cggcgatgat ccgcgccttg cccaaggaaa
     4021 attggggcac ggcgatcggc atcatcaacg gggttttcgg tcttggccat atgctcggca
     4081 tttccttgag cggcatcttc ttgactctgg cgtttcgcta ctacaccggc gatgccggcg
     4141 cgacacccga cccagcgaat agctctttgt tcgtggcggc gatgaatttg acctacgtct
     4201 ttgctttggc gctcgccgtc atccctttgt ttacctcgac taagatcaag ggcagggaat
     4261 agcgcggcgc cagtgtcgtc agcaacgtgt cgtcagcaac cgtaaattta ggcgcgcgac
     4321 tcttgtcata gagctgaaat ttttattttg gactgcgccc ctccgactgc agagatttca
     4381 ccaagaattg aggggagcct gatcggcagt tttggttgag tgtgggtcac gaataagcgt
     4441 tagaaccggc gcgctacttc aaggcaaaat ttttctcagc catggcgcaa atgctttggc
     4501 cgatggcgag ggacgcggtg gcgccggggg atggcgcgtt caagacatga atcgcaccgt
     4561 ggctttcttt gatgacgaag tcgtcgacca aggcgccgct ggcg
//
LOCUS       DATIRS010000229         1700 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1884786, whole genome shotgun sequence.
ACCESSION   DATIRS010000229 DATIRS010000000
VERSION     DATIRS010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1884786"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..474)
                     /locus_tag="VLM90_02905"
     CDS             complement(<1..474)
                     /locus_tag="VLM90_02905"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ11932.1"
                     /translation="MRDLGLTDKVVLITGGGGVLGSAFARGFADSGAKVAIGDFVRDK
                     AAKIASDLKSRGTDAIGVGADVTKEDQVAKMVADVVGRFGTIDILVNAAAVQIYPGKE
                     ITEVESNEWDFVLGIGLKGIYTCSKQVVPVMKKASRGKIVNIASIACHRGLTGGSA"
     gene            complement(576..1385)
                     /locus_tag="VLM90_02910"
     CDS             complement(576..1385)
                     /locus_tag="VLM90_02910"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSQ11933.1"
                     /translation="MFAKIRHIAMYTHNHAAVDNFYQQVFGMRRMTSNTLDETGKQNA
                     GRGHISDGVIGLAVLSRYAGMQSGMDHYGFEVEDIKEFVRRMEQHYPKSLIAKGLDYV
                     PFAGLRSYDPAGTQFDIAQAHVANVREGYNESGWEQPRWINHISIRANDPSQVAEFYE
                     KIFELKEAETYKDDGAICMTDGKVKLLLRPRDNSLYRGLREGLDHFGFKVESLAKTQS
                     DLTALAESAPPSASGKFVGGNGKKNEEDFHRCCLGQHFVADPDGVLIDMAE"
BASE COUNT          321 a          472 c          517 g          390 t
ORIGIN      
        1 ggccgagccg cccgtcaggc cgcgatggca ggcaatggaa gcgatgttga cgatcttgcc
       61 gcggctggct tttttcatca ccggcacaac ttgcttggaa caggtgtaga tccccttgag
      121 gccgatgccc aagacaaagt cccactcgtt ggactcgact tcggtaattt cttttccggg
      181 gtaaatttgc acggcggcgg cattcactaa aatatcgatt gtaccgaagc ggccgaccac
      241 gtcggcgacc attttagcca cctgatcttc cttggtcacg tcggcgccca cgccgatggc
      301 atcggtgcca cgcgatttta gatcgctggc gatcttcgcc gctttatcgc gcacgaagtc
      361 gccgattgcg acctttgcgc cggaatcggc gaagccgcgg gcaaacgccg agccgagcac
      421 gccgccacca ccggtgatca gaacgacttt atctgtaagt ccgaggtcgc gcatgaatgc
      481 tcctcacggg aaagtaagga ggaaagagtt aggagtaagg ggtggtgagc gggactcctg
      541 actccttact attcactcct tactggacta ttggcttatt ccgccatatc tatcaacaca
      601 ccatcggggt cggcgacaaa atgctggcca aggcagcagc ggtgaaagtc ttcctcgttc
      661 ttcttgccgt tgccgccgac aaatttgcca ctcgcggacg gcggcgcgct ttcagcgagc
      721 gccgtcaggt cgctttgggt cttggccaag ctttccactt tgaagccaaa atgatcgagc
      781 ccctcgcgca ggccgcggta caggctgttg tcgcgcgggc ggagcagcag cttcactttg
      841 ccatcggtca tgcagatggc gccgtcgtct ttgtaggttt cggcttcctt cagctcgaat
      901 attttttcgt agaactcggc gacctgactg gggtcgttgg cgcggatcga gatgtgattg
      961 atccagcgcg gctgctccca accggattcg ttgtaacctt cgcggacgtt ggcgacatgg
     1021 gcttgggcga tgtcgaactg ggtgcctgcc ggatcgtagc tgcgcaggcc tgcgaaaggc
     1081 acatagtcca gtcccttggc gatcagcgat ttcggataat gctgttccat gcgccggaca
     1141 aactctttga tatcctcgac ttcaaaacca tagtggtcca tgccggactg catgccggcg
     1201 tagcgcgaca acaccgccag gccgatgacg ccgtcgctga tatggccgcg gccggcattt
     1261 tgcttgccgg tctcatccag cgtgttgctg gtcatgcgcc gcatgccgaa gacctgctga
     1321 taaaaattat ccaccgcggc gtggttatgg gtgtacatgg cgatatggcg gattttggcg
     1381 aacataaagt tcctccgaaa gtttagggtg tggagtctag tgtttggcga cgcagaatct
     1441 cagttacact gaagtgggtc gcctcgtcaa tggaggattt gatggcaggg tgcgctttgc
     1501 gcacccatca gaactcccgt gcggcgagcg catcctagga attcgcggcg agaaactgtc
     1561 ggatgatgcg gtgcgcctgg tccgggttgg tcatgaaata gttgtgcgct tcgttgggga
     1621 tgacggcgta tcggccgttg ggcagcgctt tggccatggc ttcggacgcc agtcgatgcg
     1681 atgcgccggt ggccgagccg
//
LOCUS       DATIRS010000230         3734 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_901988, whole genome shotgun sequence.
ACCESSION   DATIRS010000230 DATIRS010000000
VERSION     DATIRS010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3734)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3734)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3734
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_901988"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..974)
                     /locus_tag="VLM90_02915"
     CDS             complement(<1..974)
                     /locus_tag="VLM90_02915"
                     /inference="COORDINATES: protein motif:HMM:NF039910.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSQ11934.1"
                     /translation="MITNEENQLLTQTNRGAPAGELLRRYWQPVALASELLPGGAPLA
                     VRILGEDLALFRNDQGRVGLLAIHCSHRGTDLSYGRIEDGGLRCLYHGWLYDIHGRCL
                     EQPGEPGCGVNRDAIRHRAYPCQEKGGVIFTYMGPGEPPLVPNYEFLNQPAGNFCVYK
                     VYHECNYLQANEGNIDPVHLSFLHRFLEHKDERYSGVRGTDESHYNLIAKAQPPTLDV
                     EITDFGVRIYSVRQMGEGKIYLRVSNFVLPNLSTFPGQTGGQGYGINWHVPIDDTHHW
                     KYCFFFNREAPLDQAVIDKSLAEVDAQYRPIRNESNHFMQDRQSMQTQT"
     gene            complement(1001..2110)
                     /locus_tag="VLM90_02920"
     CDS             complement(1001..2110)
                     /locus_tag="VLM90_02920"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ11935.1"
                     /translation="MGNFIFKYFWLRVAVSLLATPVFAAEGPGEWNQTLAAARKEGIV
                     VVGIPASTELRTAIGQKFKDKFGISIELLAARGPENVTRIVTEFSAGVRYYDILVAGG
                     ATPLSMVAAGAADDFNPYMILPEVKDPKNWWGGHIWEDNVSSKKHIYAFLCYTSETWW
                     YNASQAEPSEIRSFDDLLNPKWKGRIGLLDPRNPGSGQNTWSFIWKTKGEEFLTRLAQ
                     QDLLINQNLRQLADGLAKGKLAFTLGLSHYTYEPFIKAGLPVKPVSRTKEGAHANNGS
                     GVVTVIKNPPHPNAAKIFVNWLLSKEGQELYGKAMTQGTRRLDVSTAWLKESGSQGCK
                     DVMTVDDYLRLETHLESSVKKIRTPAIALATKLLK"
     gene            complement(2114..3568)
                     /locus_tag="VLM90_02925"
     CDS             complement(2114..3568)
                     /locus_tag="VLM90_02925"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ11936.1"
                     /translation="MDTLPYHDFRGFIEEAKKVSQWRLIEGADWNNEIGALIEATAEL
                     DERPMLLFDKIKDYPAGFRLVSLAFANYKRTALAFGIAPEKTKLEVVRLLARKMKSGN
                     SIPAAEVKGSPLMENVMQGEQVDLLKFPSPRFHDGDGGRYIGTGDCLINADPDSGFIN
                     AGTYRIQLHEKNLLGLWMSPGQDGRLICAKYWQQGKSCPVVATFGSDPLLFTLAHTKL
                     AYGKSELDYAGGLMGRPLEFIRGPVTGLPIPAGAEIAIEGEIPQPSEEARAEGPFGEW
                     PGYYSGGTIGTGEAQPVIRVKAIYHRNDPILEEEAPLWTGAMKIDGNPTAGILWDQLE
                     AAGVQNVVGVYNHSPYMTVVAIEQKFPGHAKQAGLAAVSCAASARNGRYVVVVDDDID
                     PTNMKEVLWAMMTRVDPPTNIDIVDGAWSTPLDPRMPPDKRESKDHTNGRAIFYAVRP
                     YHWKDKFPKVSRSSRELREQVIKKFRNVIPFPGV"
BASE COUNT          753 a         1116 c         1046 g          819 t
ORIGIN      
        1 gtctgcgtct gcatcgactg acggtcttgc ataaaatggt tcgactcgtt gcgaatcggt
       61 cgatactgcg cgtcgacttc cgccaaggac ttgtcgatca ccgcctggtc gaggggcgct
      121 tcgcggttga agaaaaaaca atatttccaa tgatgcgtat cgtcgatcgg cacatgccag
      181 ttgataccgt aaccttggcc gccggtctga ccggggaacg tgcttaaatt gggcaagaca
      241 aaatttgaaa cgcgcaggta gattttgcct tcgcccatct ggcgcaccga ataaatgcgc
      301 acgccgaaat cggtgatctc cacatccagc gtcggcggct gcgctttggc gattagatta
      361 taatgcgact cgtcggtgcc gcgcacgccg ctgtagcgct cgtccttgtg ctcgagaaag
      421 cggtgcagaa acgacaaatg caccggatcg atgttgccct cgttggcctg caggtaattg
      481 cattcgtgat aaactttgta aacgcagaaa ttgccggccg gctggttgag gaattcataa
      541 ttgggcacca gcggcggttc gcccggcccc atgtaggtga aaatcactcc gcccttttcc
      601 tggcatggat aggcgcgatg gcggatcgca tcgcggttca cgccgcaacc aggctcgccg
      661 ggctgttcta aacagcggcc atgaatatcg taaagccagc cgtggtagag acaccgtaga
      721 ccgccgtcct cgatgcggcc gtaactcagg tcggtgccac ggtgcgaaca gtgaatggcg
      781 agcagaccaa ctcggccttg atcgttgcga aacagagcca agtcctcgcc gagaatccgc
      841 acagccagag gcgcgccacc cggcagcaac tctgacgcca gcgccaccgg ctgccagtag
      901 cgccgcaaca actcgcccgc cggcgcgccg cgattggttt gggtcaacaa ttgattttct
      961 tcgttggtga tcatggcgct attttcgact ttccttatga ttatttcaaa agcttggtcg
     1021 ccaacgcgat tgccggcgtt ctaatttttt ttaccgacga ctccagatga gtttctaaac
     1081 gtagataatc gtccaccgtc atgacgtctt tgcaaccctg gctgcctgac tccttcaacc
     1141 acgccgtgct cacgtcgagc cggcgcgtgc cctgggtcat cgccttacca taaagttcct
     1201 ggccttcttt gctgaggagc cagttgacga agattttcgc cgcgttggga tggggtggat
     1261 tttttatcac cgtcaccacg ccgctgccgt tgttggcatg agcgccttcc ttggtgcgcg
     1321 acaccggctt caccggcagt ccggccttga taaacggctc ataagtgtag tggctcaagc
     1381 caagagtgaa ggcgagcttg cctttcgcca agccgtcagc gagctggcgc aggttctgat
     1441 tgataagcaa atcctgctgc gcgagcctgg tcagaaactc ctcgcctttg gttttccaga
     1501 taaacgacca agtattttgc ccagagccgg gattgcgcgg atcgagcaga ccgatgcgcc
     1561 ccttccactt gggattgagt agatcgtcga aggagcggat ttcactaggt tccgcctggc
     1621 tggcgttgta ccaccaggtc tcgctcgtgt agcagagaaa ggcgtaaata tgttttttcg
     1681 agctgacgtt atcttcccag atatgaccgc cccaccagtt cttgggatcc ttcacttccg
     1741 gcaagatcat gtacgggttg aaatcatcgg cggcgccggc ggcgaccatg gacagcggcg
     1801 tcgccccgcc ggcgaccagg atatcgtaat agcgcacgcc ggcactgaat tcggtgacaa
     1861 tgcgcgtcac gttctccggc ccgcgcgccg ccaagagctc aatggagatc ccgaacttgt
     1921 ctttaaattt ctgcccgatc gccgtgcgca gctcggtact tgcaggaatg ccgacgacca
     1981 cgatgccctc tttgcgcgcc gccgctaagg tttgattcca ttcgcccggt ccctcggcgg
     2041 caaacactgg agtggcaagc agcgaaaccg ccacccgtag ccagaaatat ttgaagataa
     2101 aattacccac agctcatact ccagggaacg gaatcacatt gcgaaatttt ttgatcacct
     2161 gctcgcgcaa ttcgcggctt gagcggctga ctttaggaaa tttatctttc caatgatatg
     2221 gccgcacggc gtagaagatc gcccggccgt tggtgtggtc tttcgactca cgcttgtccg
     2281 gcggcatgcg tggatcgagc ggcgtcgacc aggcgccgtc gacgatgtcg atgttggtcg
     2341 gcggatcgac ccgcgtcatc atcgcccaca aaacttcttt catattggtc ggatcgatat
     2401 cgtcgtcgac cacgaccacg tagcggccat tgcgcgccga cgccgcgcaa ctgacggcgg
     2461 cgaggcctgc ctgcttggca tggccgggga atttctgctc gatggcgacc acggtcatgt
     2521 acggcgagtg attgtaaact ccgacgacgt tttggacgcc ggcggcttcg agctgatccc
     2581 agagaatgcc agccgtcgga ttgccatcga tcttcatcgc gccggtccac agcggcgctt
     2641 cctcttcgag gatcggatcg ttgcgatgat agatcgcctt gacgcgaatc accggctgcg
     2701 cttcgccggt gccgatggta ccgccagagt aatatcccgg ccattcaccg aacggtccct
     2761 cggcgcgcgc ctcctcgctc ggctgcggaa tctcgccttc aatggcaatc tccgcgccgg
     2821 cgggaatcgg taaccccgtc acagggccgc ggataaattc caacggccgg cccatcaatc
     2881 caccggcgta atcgagttcc gatttaccat acgcgagttt ggtgtgcgcc agggtgaaca
     2941 gcaacggatc gctgccaaag gttgccacca ccggacagct cttgccctgc tgccagtact
     3001 tggcgcaaat cagccggccg tcctgtcccg gactcatcca caggccgagc agattctttt
     3061 catggagctg aatccggtag gtgccggcgt taatgaatcc gctatcgggg tcggcattga
     3121 tcagacaatc gccggtgccg atgtagcgcc cgccgtcgcc gtcgtggaaa cggggcgagg
     3181 ggaatttcag cagatcgacc tgctcgccct gcatgacgtt ttccatcagc ggcgaaccct
     3241 tgacctccgc ggctggaata gaattgccgg acttcatctt gcgcgccagc aaacgcacca
     3301 cttcaagctt ggttttctcc ggcgcaattc cgaaagccaa cgcggtgcgt ttgtagttgg
     3361 cgaaagccag gctgaccagg cgaaatcccg ctggatagtc cttgatctta tcgaacagca
     3421 gcatgggccg ctcatcaagt tccgccgtcg cctcgatcaa ggcgccgatc tcgttgttcc
     3481 agtcggcgcc ttcgatcagg cgccattggc tgactttctt agcttcctcg atgaagccgc
     3541 gaaaatcatg gtaggggagt gtgtccataa ctgatctccg gtgacaggag tgcgcacttc
     3601 aaatcctgcc gtcctctaac ccgacaatga caattgcgca agtcgccata ctggcgcagg
     3661 gcggtatcca tccccaccac tcctagattc cggtctgggc cggaatgacg gacgaagaag
     3721 ccgactcgct tgcg
//
LOCUS       DATIRS010000231         1976 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_115109, whole genome shotgun sequence.
ACCESSION   DATIRS010000231 DATIRS010000000
VERSION     DATIRS010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1976)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1976)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1976
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115109"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..447
                     /locus_tag="VLM90_02930"
     CDS             <1..447
                     /locus_tag="VLM90_02930"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ11937.1"
                     /translation="SLSRDQRVLAEILAKGKIALVLGLTYYSYAPFIKAGLPVEPLPV
                     PKEGVYVSGGSGHLVVLKNAPHPNATRLFLNWFMSREGQEVYSKAMHQPTRRLDVDTK
                     WLREFGVLPAKDTLTIDQYYKRENQSEEKINRLREPAAALARKLLG"
     gene            461..1576
                     /locus_tag="VLM90_02935"
     CDS             461..1576
                     /locus_tag="VLM90_02935"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ11938.1"
                     /translation="MRRAQTGLFALWLSILCGVFFVPQVSPQSKNPEWDKLVEAAKKE
                     GKVVVSLPASNELRAAIERLFEKRYGIDVEPIVGRASIVVRKMVDEAKAGVRYTDVHM
                     GGSESVVTGMLPEGVVDPLEPYMMLPEVKDPKQWWGGHIWVDNAKKFVYSTLAYQPES
                     LWFNSQLIKAEDVRSFDDLLDEKLTGKIGFLDPRTPGSGASLWSYLREVKGEDYLRKL
                     VGQKLALSRDQRVLAEILAKGNIALVLGLSYYSYTPFIKAGLPVAPLPAPKEGMYVAG
                     GSGHLVVLKNAPHPNAARLFVNWFLSREGQDVYTRAMHQPTRRLDVDTKWLREFGVQP
                     AKDHLTIEQYYKRQNQSEEKINRWREPAAALARKLLG"
     gene            1587..1787
                     /locus_tag="VLM90_02940"
     CDS             1587..1787
                     /locus_tag="VLM90_02940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11939.1"
                     /translation="MIQTRIATLTYLLITALLLAPPAFSQTKNPEWDKVVEAAKKEGR
                     VVVSIPSSAELRKEFDTGFQKA"
     gene            complement(1784..>1976)
                     /locus_tag="VLM90_02945"
     CDS             complement(1784..>1976)
                     /locus_tag="VLM90_02945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11940.1"
                     /translation="LTLGSSMDGITGSKKLGASRPVMIEVVPPICRSMERTPAFCSSA
                     ILLMLLAPRATFSSSSMPG"
BASE COUNT          443 a          552 c          590 g          391 t
ORIGIN      
        1 tctttgagcc gcgaccaacg cgtcttggcg gagattctcg ccaagggcaa aatcgcgctg
       61 gtcctgggcc tcacttacta ttcctacgcg ccgttcatca aagcgggctt gccggtggaa
      121 ccgttgccgg tgcccaaaga aggcgtctat gtcagcggcg gcagcggcca tttggtggtt
      181 ttgaagaatg cgccccatcc caacgcgacg cgactttttc tcaactggtt catgagccgg
      241 gaaggccagg aagtttacag caaggcgatg catcaaccga cgcgccgcct tgacgtcgac
      301 accaagtggc tgcgcgagtt cggtgtactg ccggcgaaag acacattaac catcgatcag
      361 tactacaagc gtgaaaatca atcggaagaa aagatcaatc ggctgcgtga accggcggcg
      421 gcgttggcgc gaaaactgct cggctaagga gggcgattcg atgcgacgcg ctcagacggg
      481 attatttgcg ctgtggttgt cgatcttgtg cggggtgttt tttgtgccgc aggtctcccc
      541 gcagagcaag aaccccgaat gggacaagct ggtcgaagcg gccaagaaag aaggcaaggt
      601 ggttgtgtcg ctgccggcaa gcaacgagtt gcgcgccgcc atcgagcgac ttttcgagaa
      661 acgttacggc atcgatgtcg agcccatagt cggccgggca tcgatcgtgg tgcgcaagat
      721 ggtcgacgag gccaaggcgg gcgtgcgcta taccgacgtg catatgggcg gcagtgaatc
      781 ggtggttacg ggtatgctgc cggaaggagt cgtcgatccg ctggaaccct acatgatgct
      841 gcccgaagtt aaagacccga aacagtggtg gggcggccat atctgggtcg acaacgcgaa
      901 gaaatttgtc tatagcacct tggcctacca gccggaaagt ctgtggttta attcccaatt
      961 gatcaaagca gaagacgtgc gcagcttcga cgacctgctc gatgaaaaat taacaggcaa
     1021 gatcggcttt ctcgatccgc gcacacccgg ttcgggggcg tcgctgtggt cctatcttcg
     1081 cgaggtgaag ggcgaagatt acctgcgcaa gctggttggc cagaagctcg ccttgagccg
     1141 cgatcaacgc gtcctggcgg aaattctcgc caagggcaat atcgctctcg tactcgggct
     1201 cagctattac tcctacacgc cgttcatcaa agcgggtttg ccggtggcgc cgctgccggc
     1261 tcccaaggaa ggtatgtacg tcgccggcgg cagcggccat ttagtcgtct tgaaaaacgc
     1321 cccccatccc aatgccgcgc ggctttttgt taactggttc ttgagccggg agggccagga
     1381 tgtttacacc cgggcgatgc atcaaccgac gcggcggctg gacgtcgaca ccaagtggct
     1441 gcgcgagttc ggcgtccagc cggcgaaaga tcatctgacc atcgagcaat actacaaacg
     1501 ccaaaatcaa tctgaagaaa agatcaatcg ttggcgcgag cccgccgcgg cgttggcgcg
     1561 caaattgtta ggctaggagg tgttccatga tacaaactcg aatcgcgaca ctgacgtatc
     1621 tgctgatcac tgcgctgttg cttgcgcccc ccgctttctc gcaaacaaaa aaccccgaat
     1681 gggacaaggt cgttgaagcc gcgaaaaaag aagggcgcgt cgtcgtgtcg attcccagca
     1741 gcgccgagct gcgcaaggaa ttcgatactg gttttcaaaa ggcctaaccc ggcatcgagc
     1801 tcgagctaaa cgtcgcgcgc ggcgcgagca acatcaataa aatcgccgaa gaacagaacg
     1861 ccggcgtgcg ctccatcgat ctgcatatcg gcggcactac ttcgatcatc accggcctgc
     1921 tggcgcccaa tttcttggat ccagtgatgc cgtccatgct gcttcccaac gtgagg
//
LOCUS       DATIRS010000232         1961 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1197289, whole genome shotgun sequence.
ACCESSION   DATIRS010000232 DATIRS010000000
VERSION     DATIRS010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1961
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1197289"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            130..1107
                     /locus_tag="VLM90_02950"
     CDS             130..1107
                     /locus_tag="VLM90_02950"
                     /inference="COORDINATES: protein motif:HMM:NF016086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-E domain-containing protein"
                     /protein_id="HSQ11941.1"
                     /translation="MLSRVANSIYWLSRYMERADNVARFIDVNLQMMLDLPSGPQEQW
                     QPLVSISGDDAKFSSNYAVATRDNVIKFLAFSAENPNSIVSCLRSARENARTIRESIS
                     PEMWEQVNSCYLTVNAAASSDLLRSASSFFSEVKKASQLFHGITDATLLHGEEWHFYR
                     MGRLLERADKTSRLLDVKYFMLLPSVADVGTPLDDIQWAAVLRSASALEMYRKRHGHI
                     VPEQIIDFLVLDHEFPRSIHYCLTTANDALHAISGTPIGMFRNAAEQRLGQLRAELAY
                     TDTHQIVTRGLHEFLDAFQTKLNAVDQGIYDTFFALRPVASSGQNQVSQ"
     gene            1151..>1961
                     /locus_tag="VLM90_02955"
     CDS             1151..>1961
                     /locus_tag="VLM90_02955"
                     /inference="COORDINATES: protein motif:HMM:NF013961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HSQ11942.1"
                     /translation="MIFEISHKTTYTYSRPVFLELHHLRLRPRSDGVQHVACFDSKVE
                     PRPSGSADGLDIDGNCVENVWFQGLTEQLIIESRAKVITHYRNPFNYILAERADRLPV
                     SYQDPAQAYLAPYTVRQHESHLVEQFARHIANRTEWKTLRFLTMLTREIAEGFQQTAR
                     GVGAPSSAEETYLSRVGSSRDLAVLFMDACRYVGIAARFVNGYYDDAGAKDQLTLHSW
                     SEVYLPGVGWRGYDPSVGLAVTDRHVAIAAAGDPLLSAPVSGTFRGNAVSAE"
BASE COUNT          408 a          588 c          554 g          411 t
ORIGIN      
        1 aacgcgggtg gccctcaaag caggttcgtt ggtagtcaac tcatctcagg gcggagggag
       61 caaggacact tgggtgttgc aggcatgaat gttgtctagt gagccattca caaaacggcg
      121 cagagaacta tgctaagccg agtcgccaat tcgatctact ggttgagccg ctacatggaa
      181 cgggccgaca acgtcgcccg gtttatcgac gtcaacttgc aaatgatgct cgatctgccg
      241 agcggcccgc aggaacagtg gcagccgttg gtgagcatct ccggcgacga cgctaaattc
      301 tcgtcgaatt atgccgtagc gacgcgcgac aacgtcatca agtttctcgc cttctccgct
      361 gagaatccga actcgatcgt ctcctgtctg cgctcggcgc gggagaatgc ccggacgatt
      421 cgcgagtcga tttcccccga gatgtgggag caggtcaaca gctgttattt gacggtcaac
      481 gccgcggcct ccagcgattt gctgcgatcg gcatcgagct tttttagcga agtgaaaaaa
      541 gccagccaac tttttcacgg cattaccgac gcgacgctgt tgcacggcga agagtggcac
      601 ttttatcgta tgggacgtct gctcgaacgc gctgataaaa cctcccggct gctcgatgtt
      661 aaatatttca tgctgttgcc atcggtcgcc gacgtcggca cccccttgga cgatattcag
      721 tgggccgcgg tgttgcgatc ggcgagcgct ttagagatgt accgcaagcg ccacggtcat
      781 attgtgcctg aacagatcat cgactttctc gtcttggacc atgagtttcc acgctcgatt
      841 cattactgcc tgaccaccgc caacgatgcc ctgcacgcga tttccggcac gcccatcggc
      901 atgttccgca atgccgccga gcagcgcctg ggtcagctgc gcgccgagtt ggcctatacc
      961 gacacgcacc agatcgtcac ccgcggtctg catgaattcc tcgatgcgtt tcagaccaag
     1021 ttgaatgcgg tggatcaggg catctacgac accttttttg cacttcgccc ggtggcatcg
     1081 agcgggcaaa atcaagtcag ccaatgatcg gcaagttcac cgggccgacg gaatagacgg
     1141 aagcaccaac atgatcttcg agatcagtca caaaaccact tacacctata gccggccggt
     1201 ttttctcgag ctccatcatc tgcgcctccg tccccggtcc gatggcgtgc agcatgtggc
     1261 gtgtttcgat tccaaggtcg agccgcggcc cagcggatcg gcggacgggc tcgatatcga
     1321 cggcaactgc gtcgagaatg tttggtttca aggtctgacg gaacaattga ttatcgaaag
     1381 ccgggccaag gtcatcaccc attaccgcaa tccgttcaat tacattctcg ccgagcgggc
     1441 cgaccgcctg ccagtgagct accaggatcc ggcccaagct tatcttgcgc cgtacacggt
     1501 gcgccagcac gagagccatt tggtcgagca attcgcccgc cacatcgcca atcggacgga
     1561 atggaaaacc ttacgcttcc tgacgatgct cacccgggaa attgccgaag gttttcaaca
     1621 aacggcgcgg ggagtaggtg cgccgagcag cgctgaggaa acctatttga gccgagttgg
     1681 atcgagccgg gatctcgcgg tgttattcat ggacgcttgc cgctatgtcg gcatcgccgc
     1741 tcgattcgtc aacggctact acgacgacgc cggcgcgaaa gatcaactca cgctgcactc
     1801 atggagcgaa gtctatctac ccggcgtcgg ctggcgaggt tacgatccga gcgtcggact
     1861 ggccgtcacc gatcgccacg tcgccatcgc cgctgccggc gacccgctgc tgtcggctcc
     1921 cgtgagcggc acctttcgcg gcaacgccgt ttcagcggaa c
//
LOCUS       DATIRS010000233         1627 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1197311, whole genome shotgun sequence.
ACCESSION   DATIRS010000233 DATIRS010000000
VERSION     DATIRS010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1627
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1197311"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            137..1459
                     /locus_tag="VLM90_02960"
     CDS             137..1459
                     /locus_tag="VLM90_02960"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HSQ11943.1"
                     /translation="MKKFLIGSIAFLGAVSLALPAVAAMAPKRSVLGNGVVLLTSEQR
                     ALPMVSIELLIDAGSRHEGAKQAGLANLTAKLLTFGTKRRSAQQINETLDFIGASLEA
                     GCGEDVANISMTLLKKDLATGLDLLAEILTSSTFPQAEIDRQKQAIVASIRAKEEDPG
                     AVAQKAFGAALFPDSPYGRPVEGTEASVKALTHDGLKEFFARHYRPNRTILSVVGDVS
                     EQEITQALNQALRGWRKGEPGTPFTPPSKIGAPQVLRVSKDLTQANIVLGHAGLPRNH
                     PDYYAVQVMNYILGGGGFSSRAMDSIRNERGLAYSVYSFFGAEKSHGYFEFVMQTKNE
                     TAQEAIRLARQEIRRMREEPVSEQELSDTKNYLTGSFPLRFDTNRKVAGFLAQVEFFE
                     LGLDYPDRYNELIGKVTRADIQRVAKLYLQPDKIVTVIVGNQKKIGDK"
BASE COUNT          354 a          466 c          467 g          340 t
ORIGIN      
        1 gctggcgcca gatggacggc tacctggacg gcattcgaaa agtcacgcgt gaagatattc
       61 gccgcgtggc gcgccagtat ctcgatcccg accggcgcac tgtcggcact ttgatcccga
      121 ccaaaatcaa accctaatga agaaattctt gatcggctcg atcgcgttcc taggcgccgt
      181 gagtcttgct ttgccggcgg tcgccgccat ggcgcccaag cgttcggtgc ttggcaacgg
      241 tgtcgtgttg cttacctccg agcaacgcgc cctgccgatg gtgtccatcg agttgttgat
      301 cgacgccggc tcgcgccacg agggggcaaa gcaggctggt ctggcgaatc ttacggccaa
      361 actgttgacc tttggcacca agcgacgtag cgcccagcaa attaacgaga ccctggattt
      421 tatcggcgcc agcctcgagg cgggttgcgg cgaagatgtc gccaacatca gcatgacctt
      481 gctaaaaaaa gatcttgcca ccggcctcga cttgttagcc gaaatcctca cctcttcgac
      541 ttttcctcaa gccgagatcg accggcaaaa gcaggcgatc gttgcttcga ttagagcgaa
      601 ggaagaagat ccaggcgccg tggcgcaaaa ggcgttcggt gcagcgctgt ttcccgacag
      661 tccctacggc cggccggtgg aaggaaccga ggcgtccgtc aaagcgttga cccatgatgg
      721 cctcaaagag tttttcgcgc gccactaccg gcccaaccgg actatccttt ccgtcgtcgg
      781 cgacgtgtcg gagcaggaga tcacccaggc cttgaatcaa gctttgcgcg gctggcgtaa
      841 gggcgagccg ggcacgccgt ttactccgcc gtcaaagatc ggcgcgccgc aggtgttgcg
      901 cgtgagcaag gatctgaccc aggccaatat cgttcttggc catgccggcc taccgcgcaa
      961 tcatccggat tactatgccg ttcaagtgat gaattatatc ctgggcggcg gcggtttttc
     1021 gtcgcgggcg atggattcca tccgcaacga gcgcggcttg gcctattcgg tgtatagttt
     1081 tttcggcgcg gaaaagagcc acggttactt tgagtttgtt atgcagacga aaaacgaaac
     1141 cgcgcaggaa gcgattcgtc tcgcgcggca agaaatacgt cgcatgcgcg aggagccagt
     1201 cagcgagcaa gagctgagcg atacaaaaaa ttacctcacc ggaagttttc cgctccgttt
     1261 cgacaccaac cgcaaggtcg ccggtttcct cgcccaggtg gaattcttcg agctggggct
     1321 cgactacccg gaccgttata acgagctcat cggcaaggtc actcgcgcgg acattcagcg
     1381 tgtggcaaag ctgtacttgc agccggacaa aattgtgacg gtcattgtcg gcaaccaaaa
     1441 gaaaatcggc gacaaatgag ccgcgcgcct tcgcccgata gaattctcgc catttatcgg
     1501 taaattgatc tgatcgaaaa atgcgcccaa aagcagacct tagcttgaca gtaacggtct
     1561 cgctgcggca tagtttgtgc tgatctgtgg cagataatct cgctgccttt catcacggct
     1621 aggggtc
//
LOCUS       DATIRS010000234         1944 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_115341, whole genome shotgun sequence.
ACCESSION   DATIRS010000234 DATIRS010000000
VERSION     DATIRS010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1944)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1944)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1944
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115341"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1240
                     /locus_tag="VLM90_02965"
     CDS             <1..1240
                     /locus_tag="VLM90_02965"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ11944.1"
                     /translation="PIIRLSRNIKKFTKRGQVSTGRLTVLLQESIQGNRIVKAFGMED
                     YEDRRFMAENWRLFKESLRASRIKSIVAPSMELLASFGIGGVVWYGGWSVIGGGRTQG
                     EFFAFMAAMFLMYAPFKGLSRTYTAVHQGLAGAERVFEILDERPEISDKPGAQLAKPF
                     AGKIDLQHVSFAYGETPVLKNIDLTVEAGQMVALVGMSGVGKSTLVDLIPRFYDVNAG
                     RILLDGVDVRELTVQSLRGQIGIVTQHTFLFNDSIRNNIAYGDPERDMTAIVAAAKAA
                     HAHEFIAAMPNGYDSEIGEMGLQLSGGQRQRIAIARALLKDAPILILDEATSSLDADS
                     ERSVQEALETLMSTRTTIVIAHRLSTIRKADRIVVMVDGAIAEQGTHDELMARDSEYS
                     RLYSLQLLENRPVKEVELVH"
     gene            1256..>1944
                     /locus_tag="VLM90_02970"
     CDS             1256..>1944
                     /locus_tag="VLM90_02970"
                     /inference="COORDINATES: protein motif:HMM:NF016311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase N-terminal domain-containing
                     protein"
                     /protein_id="HSQ11945.1"
                     /translation="MWFLGYNILLTMVFLLILPFTPLLQLIGKRFSAGLAQRLGYFPH
                     AQLRAVAAARPVWIHASSVGEVGSVTALVRELNNRHPQRRIVLSTFTATGNETAQKFA
                     GVDAVIYLPLDFCWTVRRALTQWNPSLMLFVETEIWPNLLRECFRRGIPTVLVSGRLS
                     ARSLPRYERFRGFFCQVVRRFAAIGMQTGEDAARIVGLGADANKVSVVGSLKWAGAAP
                     QSWRFTDVPRHG"
BASE COUNT          378 a          551 c          604 g          411 t
ORIGIN      
        1 gccgatcatc cgactgagcc ggaacatcaa aaaatttacc aagcgcgggc aggtgagcac
       61 gggcaggctc accgtgctgt tgcaagagag cattcagggc aaccgcatcg tcaaagcttt
      121 cggcatggaa gattacgaag atcggcgctt catggcggag aactggcggc tgttcaaaga
      181 gtccctgcgc gccagccgga tcaagtcgat cgttgcgccg tcgatggagc tgttagcttc
      241 gttcggcatc ggcggcgtgg tttggtacgg cggttggagc gttatcggcg gcgggcgcac
      301 gcaaggcgaa ttctttgctt tcatggcggc gatgtttttg atgtacgcgc ctttcaaagg
      361 actgagccgc acttacacgg cggttcatca gggacttgcg ggcgccgaac gggtcttcga
      421 aatactcgac gagagaccgg agattagcga caagccggga gcccaactcg ccaagccttt
      481 cgcgggcaaa atcgatctgc aacatgtcag cttcgcctat ggcgaaacgc cggtgctgaa
      541 aaatatcgat ctgaccgtcg aagccggcca aatggtcgcc ctggtgggca tgagcggcgt
      601 cggtaaaagc accctggtcg acttgatccc gcgcttctac gacgtcaacg ccggccgcat
      661 tctgctcgac ggcgtagatg ttcgcgagct caccgtgcaa tcgctgcgcg ggcaaatcgg
      721 catcgtcacc cagcacactt tcttgttcaa cgatagcatt cgtaacaata tcgcctacgg
      781 cgatcccgag cgcgatatga cggcgatcgt cgccgccgcc aaggcggctc atgcccacga
      841 gttcatcgcc gcgatgccca acggttatga ttcggagatc ggcgaaatgg gcttgcagct
      901 ctccggcgga cagcgccaac gcatcgcgat cgcgcgggct ctattgaagg atgcgccgat
      961 cctgatcctc gacgaagcga cttcgtccct ggatgccgat tccgaacgtt cggttcagga
     1021 agcgttggag actctgatga gcacgcggac gacgatcgtc atcgcccatc ggttgtcgac
     1081 gattcgcaaa gccgaccgaa tcgtcgtcat ggtcgacggc gcgatcgccg aacagggcac
     1141 ccatgacgag ttgatggcgc gggatagcga atacagccgg ctgtactcgc tgcaattact
     1201 cgaaaatcgc ccagtgaagg aagtcgaatt ggtgcactag gaagccggcg ggttcatgtg
     1261 gtttctcggc tataatatcc ttctcaccat ggtgtttttg ctgatcttgc cgtttacgcc
     1321 attgctgcaa ttaatcggta agcgattcag cgcgggactg gcgcagcgct tgggttattt
     1381 cccgcatgcc cagctgcgcg ccgtggcggc agccaggccg gtgtggatcc atgcctcgtc
     1441 ggtgggcgaa gtgggttcgg tcaccgccct ggtgcgcgag ttgaacaatc gccatcccca
     1501 gcggcgcatc gtgctctcga cgttcaccgc caccggtaat gaaaccgcgc agaagtttgc
     1561 cggagtcgat gcggtgatct atttaccctt ggatttttgc tggaccgtca ggcgggcctt
     1621 gacccagtgg aacccgtcat tgatgctttt cgtcgagacc gagatctggc ccaacttgtt
     1681 gagagaatgt tttcgccgcg gcatcccgac agttttagtg agcggccgct tgtcggcacg
     1741 gtccttgcct cgctacgaaa gattccgcgg ttttttttgc caggtggtgc ggcggttcgc
     1801 cgccattggc atgcaaaccg gcgaagacgc ggcgcggatc gttggactgg gcgctgatgc
     1861 caataaggtg tcggtggtcg gtagtctcaa atgggccgga gcggcgcccc agtcgtggcg
     1921 attcaccgac gtgccgcggc atgg
//
LOCUS       DATIRS010000235         3813 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1295986, whole genome shotgun sequence.
ACCESSION   DATIRS010000235 DATIRS010000000
VERSION     DATIRS010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3813
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1295986"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1171
                     /locus_tag="VLM90_02975"
     CDS             <1..1171
                     /locus_tag="VLM90_02975"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSQ11946.1"
                     /translation="ALRIDRSSPGPQTPRKSRSIGKLIVWSLAIAAVVAAGLFLKDIF
                     NPGIEVQLATASMTSPSQASAVLTASGYVVARRKAAVASKGTGTLVYLGVDEGDKVKK
                     GQVIARLEDSDVAAARDRARENLRVAEADLNDAKQNLERMSILLKRELVAQAEYDIAD
                     ARYKRVVATIDAAKFGLKEAEVAVDNTRIVAPFDGTVLKKNADVGEIVAPLAGAASSR
                     AAVVTIADMSSLEVDADVSEANITRVSAEQPCEITLDAYPQQRYPGYVTKIVPTADRA
                     KATVLVKIKFRQYDQKVLPEMSAKIAFLPAGTGSSAAETKALLTVPAAAVATRNGRSV
                     VYQIRDEHAVEVPVTVGQKLAGLVEVQSGLKDGDKVIGKVDDQLKDGAKVTQKTK"
     gene            1184..1858
                     /locus_tag="VLM90_02980"
     CDS             1184..1858
                     /locus_tag="VLM90_02980"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ11947.1"
                     /translation="MAAPLIQVQDLYKSYQRDSLEIPVLRDINLEIAEGEFIAFMGPS
                     GSGKTTLLNLIAGIDKPTSGKIIIAGIDVTDLSESELAVWRSRNVGFIFQFYNLIPVL
                     TALENVELPLILTPLAKKARRAHAEMALSVVGLAERMHHYPRQLSGGQEQRVAIARAI
                     ATDPAILVADEPTGDLDKASAEEVLELMDRLNRELNKTILMVTHDPRAAERARSVRQL
                     EKGELA"
     gene            2129..3289
                     /locus_tag="VLM90_02985"
     CDS             2129..3289
                     /locus_tag="VLM90_02985"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HSQ11948.1"
                     /translation="MELFRLLLRNVLRHKLRGLLTIVGVGVAVMAFALLQTVVSAWHA
                     GVEASAANRLITRHAVSFVFSLPLAYRDRIAQIPGVNKVTFANWFSGVYIDKNQFFAR
                     LAVDSDTFFDVYSEFLVPPEQFEVFKRERNATIIGSDIAERYNLKLGDIMPIEGDVFP
                     GQWEFVVRGIYEPRDRTTDPTTMMFHYKYLEERVRQEMPQRSGEIGWYIVRIDDPENS
                     AAVSQEIDNLFANSRAETKTETERAFQQSFLSAASAIITAMNIMSFVIIGIILLVVGN
                     TMIMSARERTHEFAVLKALGFTGGQLFFLIAGESILLALFGSALGLGVTFPAVAGFET
                     ALPKGWFPVFYIKPETVAIGCAAGLLVGALAAIIPLRRVLTTRIVEGLRHVG"
     gene            3475..>3813
                     /locus_tag="VLM90_02990"
     CDS             3475..>3813
                     /locus_tag="VLM90_02990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11949.1"
                     /translation="MQIPLKYILRSSVSRRLTTAITIIGIALVVFVFTAVLMMANGVQ
                     KTLRSTGSDDNLLVARKAAMSEIMSIMDREAAGIIVNLPQVAQAADGTPISSKEVVVI
                     INMNKLGAAGI"
BASE COUNT          796 a         1060 c         1119 g          838 t
ORIGIN      
        1 agctctgaga atcgatcggt cgtctccagg cccacaaacg ccgcgcaagt ctcgctctat
       61 cggcaaactc atcgtttggt cgttggcgat cgccgccgtg gtcgcggctg ggctatttct
      121 caaggatatt tttaaccccg gcatcgaagt tcagctcgcc acagcctcga tgacttcgcc
      181 atcgcaggca agcgccgtgc tcacggcgag cggttatgtg gtggcccggc gcaaagcggc
      241 ggtggcttcg aagggcaccg gcacgctggt ttatctcggc gtcgatgaag gtgacaaggt
      301 taagaaaggc caagtcatcg ctcgacttga ggatagcgat gtcgcggcgg cgcgggaccg
      361 agcgcgggag aatctgcgcg ttgccgaagc cgatctgaac gatgctaagc agaatctgga
      421 acgcatgagc attttgctca agcgggaact ggtcgctcag gccgagtacg acattgccga
      481 cgctcgttac aagcgcgtgg tggcgaccat cgacgcagcg aagttcggtc tcaaagaggc
      541 ggaggtagcg gtggacaaca cccgcatcgt cgcgcccttc gacggcactg tgctcaaaaa
      601 gaacgccgat gtcggcgaga tcgtcgcgcc cttggccggt gcggccagtt ccagagctgc
      661 ggtggtgacc atcgccgaca tgtcatcctt ggaagtcgat gccgatgtct ccgaagctaa
      721 catcacgcgg gtcagcgccg aacaaccctg cgagatcact ttagatgctt acccgcagca
      781 gcgttatcct ggttacgtta caaaaattgt tcccaccgcc gaccgcgcaa aggcgacggt
      841 gctggtgaaa atcaaattcc gtcagtacga ccagaaagtt ttgccggaga tgagcgcgaa
      901 aattgccttt cttccggctg gcacgggtag cagtgccgca gaaacgaagg cgttgctcac
      961 ggtgccggcg gcagcggtgg caacgcgcaa tggccgttcg gtagtgtatc agattcgcga
     1021 cgagcacgcc gttgaagtgc cggtgaccgt tggacaaaaa ctcgccgggc ttgttgaggt
     1081 ccagagcgga ctcaaagacg gcgataaagt aatcggtaaa gtcgacgatc aactcaaaga
     1141 cggtgccaaa gtcacgcaaa agaccaaata gcctcgttat cccatggccg ctccgctcat
     1201 ccaagtccaa gatctctaca aatcctacca gcgcgatagt ctggagattc cagttttgcg
     1261 tgacatcaat ctggagatcg ccgaaggcga atttatcgcc ttcatgggac cgtccggctc
     1321 gggtaagacg acgctgctaa atctaattgc cggcatcgac aaaccgacct cgggaaagat
     1381 tatcatcgcc ggcatcgacg tgacggacct gagcgagtcc gaactggcgg tctggcgctc
     1441 gcgcaatgtc ggcttcattt ttcaatttta caatttgatt cccgtgctga ccgcgctgga
     1501 gaacgtcgag ctgccgctga tcctgacgcc gctggcgaaa aaagcacggc gcgcccatgc
     1561 cgagatggcc ctgagcgtcg tcggcctggc cgagcgtatg catcattatc cacgccaact
     1621 ctccggcggt caggaacagc gggtagctat cgcccgcgcc atcgccaccg atccggcgat
     1681 cctggttgcc gacgaaccta ccggtgatct tgataaggcc tccgccgaag aagtgctcga
     1741 actcatggac cggctcaacc gcgagctcaa caaaaccatt ctcatggtca cccatgatcc
     1801 gcgcgccgcc gagcgggcgc gctcggtgcg ccagttggag aagggggagt tggcataggg
     1861 gagggtgggg tatggagtga gggagtaatg gagtgttgga gtgttgctgg gccgaggatc
     1921 gaggatggcg ggttgcagtg tctcgatcct tcggctcagg ctcgaggtgc caggtaaagt
     1981 tcaatgcgaa atcatgatcc gtcataccgg cgaaagccgg tatccagacc catcagcctc
     2041 ctggataccg tttttcaacg gtatgacgga cgtttgaggt gtcgtttcaa aactcctaac
     2101 tttttactac ttactcctta ctgtagccat ggaactcttc agacttttgc tgcgtaatgt
     2161 cctgcgccat aagctgcgcg gcttgctgac gatcgtcggc gtcggtgtgg cagtgatggc
     2221 gttcgcgttg ctccagaccg tggtaagcgc ttggcatgcc ggcgtggaag cgtcggcggc
     2281 caaccgcttg atcacgcgtc acgcggtgtc tttcgtgttt tcgttgccgc tcgcctatcg
     2341 tgatcgcatc gcgcagattc ccggtgtcaa caaggtcact ttcgccaatt ggttttccgg
     2401 ggtttacatc gataagaatc agttcttcgc tcgtctggca gttgattcgg ataccttctt
     2461 cgacgtctat tcggagttcc tagttccgcc agagcagttt gaagtattca agcgtgagcg
     2521 caacgcgacg atcatcggta gcgacatcgc cgaacgctac aacttgaagc tcggcgacat
     2581 catgcccatc gagggcgacg tgtttcccgg ccagtgggag ttcgtcgtgc gcggtatcta
     2641 tgaaccgcgc gaccggacca ccgacccgac gaccatgatg tttcactaca agtatttgga
     2701 agaacgcgtt aggcaagaga tgccgcagcg ttccggcgag atcggctggt atatcgtgcg
     2761 catcgacgat cccgagaatt cagcggcggt ctcccaagaa atcgacaatc tgttcgccaa
     2821 ctcccgcgcc gaaaccaaga ccgaaaccga acgggctttt cagcagagtt ttctctccgc
     2881 ggctagcgcg atcatcactg cgatgaatat catgtcgttt gtcatcatcg gcatcattct
     2941 cctagtggtc ggcaatacca tgatcatgtc agcgcgggag cgcacccacg agttcgctgt
     3001 cttgaaggcg ctcggcttta ccggcggcca gttgtttttt ctcatcgccg gggaatcgat
     3061 cctgctcgcg ctgttcggca gcgccttggg actgggcgtg actttcccgg cggtggcagg
     3121 ttttgaaacc gcgctaccga aaggttggtt tccggtgttc tatataaagc cggagaccgt
     3181 ggcgatcggc tgcgccgccg gcctgttggt cggcgcgctc gcggcgatca ttcctttgcg
     3241 acgggtgctg accacaagga tcgtcgaagg gctgcgccat gtcggttaat cttaagggca
     3301 tgttcaggtt tttttttgcg gtttttgtgt caagtcccat tttgtttatt caccacgaag
     3361 gacacgaaga tcacgaagtt cggagtctta atcatcttaa cccttcgtgt ccttcgtgct
     3421 cttcgtggtg aaaatatctt tacagtaaac tcgtaagtgc cgttttaatt aagaatgcaa
     3481 ataccgctga aatacatcct gcgcagctcg gtgtcgcggc gcttgaccac ggcgatcacg
     3541 atcatcggca tcgcgctggt ggtgtttgtc tttaccgcgg tgttgatgat ggccaacggc
     3601 gtgcaaaaga ccttgcgctc caccggctcc gacgacaact tgctggtggc gcgcaaagcc
     3661 gccatgagcg agatcatgag catcatggat cgcgaggcgg cggggatcat cgtcaatcta
     3721 ccgcaagtgg cccaggccgc cgatggcacg ccgataagtt cgaaagaagt cgtggtgatc
     3781 atcaacatga acaagctcgg cgccgcgggc atc
//
LOCUS       DATIRS010000236         2536 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1591034, whole genome shotgun sequence.
ACCESSION   DATIRS010000236 DATIRS010000000
VERSION     DATIRS010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2536
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1591034"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2208
                     /locus_tag="VLM90_02995"
     CDS             <1..2208
                     /locus_tag="VLM90_02995"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HSQ11950.1"
                     /translation="KKTATRTGLMTFGGAPEWEFPPREVIPPAEFSTHQDREQSDIQA
                     ALQGAAAQIGEGRQGRILLFSDGNENRGETARVLPLLRSQGVQVWTLPVGLSCGRNEI
                     YLADLTLPRQVDSAESFEIRGAIESLREAPARLRLLRDGVLSAERELRLSAGSNNVSF
                     RDTLSERGNHRYELLVESADDTLAENNLLQGVVEVKGPPRVLLLSAQKDSQRVLSRVL
                     QVQGYDVVEAAPEAHSVSLAELAAFDLLVLDNVPAFQLTHAKMENIEKYVRDFGGGLL
                     VVGGSQSYGAGGYYRTPLERILPVDMRPPAKVEMPHVALLFVIDKSGSMGSGGEGSTK
                     LDLAKAAAIAAADIMNPTDQVGILAFDANWDWALPFRQVGKGEWITEKLANLQSDGGT
                     DLYKAMLEAHRGIAGKTASIKHVIALSDGLTDKADFQALVAKMARDGITVSTVSIGND
                     ADVKLMAEIAKEGKGRGYVALDPQTIPQIFTTETLLISRDLLIEKPVAPTIVAATGAL
                     KGIPQNNLPALRGYVLTYPKPRAELLMRVDKDPLLVSWRYGLGRVMAFTSDLSGRWGK
                     DWVGWSAFPQWASQIGRDTMRKVLDGKMRVDFHGDGDAVKVVGDLVAQDGKFLNYLKL
                     KATIAAPNQTSREQPLQQSAPGRYEGKFTPAQRGIYFITVYAEGKAGAAPLPVATVPY
                     IAPYPKEYRELKPNLALLSRLAEETGGEMLDAEKFHDGLKRLYAPTPGKSSKG"
BASE COUNT          513 a          734 c          818 g          471 t
ORIGIN      
        1 aaaaaaaccg cgacgcgcac cggactgatg acatttggcg gtgcaccgga gtgggagttt
       61 ccgccgcgcg aagtcattcc accggcggag ttctcgaccc accaggaccg cgaacaaagc
      121 gatatccaag ccgccctgca aggcgcagcg gcgcagatcg gcgaagggcg gcagggtaga
      181 atattgctct tttccgacgg caacgagaac cgcggcgaga ccgctcgggt gctgccgctg
      241 ttgcgcagcc aaggcgtgca ggtgtggacg ctgccggtgg gcttgtcgtg cggccgcaat
      301 gagatttatc tggccgatct gactttgccg cgccaagtcg acagcgccga gagcttcgag
      361 attcgcggcg cgattgagag cctgcgcgaa gcgccggcgc ggctgcgctt gctgcgcgac
      421 ggcgtgcttt ccgccgagcg ggagctgcgt ttgagcgccg gcagcaataa cgtttccttc
      481 cgcgatacgc ttagcgagcg cggcaatcac cgttacgagc tcttggtcga gtcggcggac
      541 gacacgctgg cggaaaataa tctgctccaa ggcgtcgtcg aagtgaaagg gccgccgcgg
      601 gttctgttgc tgtcggcgca gaaagacagc caacgagttc tttctcgagt cttgcaagtc
      661 caaggctatg acgtcgtcga ggccgcgccc gaggcccatt ccgtttcgct tgccgagctc
      721 gctgctttcg atttattggt cctcgacaac gtgccggcat ttcaactgac ccacgcgaag
      781 atggagaata tcgaaaaata cgtgcgcgac tttggcggcg gattactggt cgtcggcggc
      841 tcgcaaagtt atggcgccgg cggttattac cgcacaccgc tggagcgcat cttgccggtc
      901 gacatgcgac cgccggcgaa agtagaaatg ccgcatgtcg cgctgctgtt tgtcatcgat
      961 aaatccggca gcatgggctc gggtggcgaa ggcagcacca agctcgatct cgccaaggcc
     1021 gcggctatcg ccgccgccga tatcatgaac ccgacggatc aggtgggcat cctcgccttc
     1081 gacgccaatt gggactgggc gctgccgttt cgccaagtgg gcaagggcga gtggatcacc
     1141 gagaagctgg cgaatttgca atccgacggc gggacagatt tgtataaagc gatgctcgaa
     1201 gcccatcgcg gcatcgccgg caaaacggcg tcgatcaagc atgtgatcgc gctctccgac
     1261 ggtctcaccg acaaggcgga ctttcaggcg ctggtggcca agatggcgcg cgacggcatt
     1321 actgtttcga cggtgtccat cggcaacgac gccgacgtga agctgatggc ggagatcgcc
     1381 aaagagggca aggggcgcgg ctatgtcgcc ctggatccgc agacgatccc gcagatcttt
     1441 accaccgaga cgctgttgat ctcgcgcgat ctgttaattg aaaaaccggt ggcgccgacc
     1501 atcgtcgccg ccaccggcgc gctcaaaggc attccgcaaa ataatttgcc ggctctacgc
     1561 ggctacgtgc ttacctaccc caagcctcgc gccgagttgc tcatgcgtgt cgacaaagac
     1621 ccgcttttgg tgtcctggcg ctacggtctc ggccgggtga tggcgttcac ctccgacttg
     1681 agcgggcgct ggggcaaaga ttgggtcggc tggagcgcct ttccccagtg ggccagtcag
     1741 atcggccgcg acaccatgcg caaagttctt gacggcaaaa tgcgcgtcga ttttcacggc
     1801 gacggcgacg cggtgaaagt ggttggcgat ttagtcgccc aagacggcaa gtttttgaat
     1861 tatttaaaac tcaaggcgac catcgccgcg cccaatcaaa cgagccggga gcagccgctg
     1921 cagcaaagcg cgccggggcg ctacgagggc aagtttactc cggcgcagcg gggtatttat
     1981 ttcatcacgg tttacgccga gggcaaagcc ggcgcggcgc cattgccggt ggccacggtg
     2041 ccttacatcg cgccctatcc caaagaatac cgcgagctga agcccaactt ggcgttgctc
     2101 agccgactcg ccgaggagac cggcggcgag atgctcgacg cagaaaaatt tcacgacggt
     2161 ctaaagcgtc tctacgcgcc gacgccgggg aaaagttcta aggggtaaga gacatggtgg
     2221 ccgttggcga gcgccgggct gctgctgttt ctcgccgacc tggtgctgcg cagttggccg
     2281 cgcaaggccg tcctgaccga agtcgtggcg ggtgggtaga atcggtcaga attttgcccg
     2341 cgagttggag ctgtgatttt gcaagttctg ccactatcgg aagtaaagtc gaagctgagc
     2401 gacgggtcga cgtggtcgag tggcgcgacg aagagttgac gatcactcga atgactgaac
     2461 cgcggcgatc ctcatcagca aggatgagta cgagggctgg cgcgaaacgg tggcaatcac
     2521 caaaaaccgg cagttc
//
LOCUS       DATIRS010000237         1510 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_902948, whole genome shotgun sequence.
ACCESSION   DATIRS010000237 DATIRS010000000
VERSION     DATIRS010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1510
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_902948"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..741)
                     /locus_tag="VLM90_03000"
     CDS             complement(1..741)
                     /locus_tag="VLM90_03000"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HSQ11951.1"
                     /translation="MKNSWETVTVDNSPMRLYLSQPDRPGPLPAIVVIQNQDGVGDFT
                     QEMTRRVAEAGYVGIAPELYHREGEPKTPEQTANLKHTRRDTNVINDINATIHYLRGC
                     ANVDTSKLGIVGFCMGGRVAFLMAAASTSFKAAVDFYGGGTYSKWGDRPAPAELAAQV
                     SCPIQGHFGELDKNPPPDEMRKLDAELTRLGKEHEFFFYAGAPHGFNRSGWDGYRPEA
                     DKTSWARSVEFFQKHLAADAMRKTAAAG"
     gene            920..>1510
                     /locus_tag="VLM90_03005"
     CDS             920..>1510
                     /locus_tag="VLM90_03005"
                     /inference="COORDINATES: protein motif:HMM:NF012879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HSQ11952.1"
                     /translation="MFPDTNFKREWRAALVIGWIAAFLIGGVIEIQAAQAKVAKRRNQ
                     TAETSQAAKASTAAKGAQPAKSFDIAFKEFKLKNGLRVLLAEDHAAPTFSISVTYNVG
                     SRDERPGRTGFAHLFEHMLFQGSENVGKGEHFILVQNNGGSANGTTNADRTNYFETLP
                     SNQLELGLFLEADRMRAPAITQANFDNQRLTVQEERR"
BASE COUNT          316 a          439 c          445 g          310 t
ORIGIN      
        1 ttaaccggca gccgcggttt ttctcatggc gtctgccgcc agatgctttt gaaagaattc
       61 cacgcttcgc gcccaggacg tcttatccgc ctccggtctg tagccatccc aacccgaacg
      121 gttaaagccg tgcggcgcgc cggcatagaa aaagaactcg tgttctttgc ccagtctggt
      181 cagttcggcg tcgagcttgc gcatctcgtc gggcggcggg tttttatcca gttcgccaaa
      241 gtgcccctgg atcgggcagg aaacctgcgc cgccaactcc gcgggcgcag ggcggtcgcc
      301 ccatttcgag taagtgccgc cgccgtaaaa gtccaccgcc gctttaaatg acgtgctggc
      361 ggcggccata agaaaggcca cccgaccgcc catgcagaaa ccgacgatgc ctaacttgga
      421 ggtgtcgacg ttggcgcagc cgcgcaggta atggatcgtg gcgttgatgt cattgatgac
      481 gttggtgtcg cggcgcgtgt gcttgaggtt ggccgtttgc tcgggcgttt ttggctcgcc
      541 ctcgcggtga taaagctcgg gagcgatgcc gacgtagccg gcctcggcga ctctgcgcgt
      601 catttcctgg gtgaagtcgc ccacgccatc ctgattctga atgaccacga tggccggcaa
      661 ggggccggga cgatccggtt ggctcaagta aagccgcatc gggctgttat caaccgtgac
      721 ggtttcccat gaatttttca tagcggattt cctttacgaa gcgttgcgaa tgattgccca
      781 ttcccttatg ccgttggctg gaaaaggtca aatggcgatc gtcgcaacga cgcgtgacag
      841 tgcccgggta gctgacttgc gcggcgcgtc gaagatgtta caaataatgc gcaaggcatc
      901 tataggccgg ggttctaaga tgtttcctga cacaaacttc aagcgagaat ggcgagcggc
      961 gttggtgatt ggctggatcg ccgcgttctt gatcggcggc gtgatcgaga tccaagcagc
     1021 ccaagcaaag gtcgccaaac ggcgtaatca aactgcggaa accagccaag cggccaaagc
     1081 aagcacggcc gcaaaaggcg ctcaacctgc aaagtccttc gatatcgcat tcaaagaatt
     1141 caaactcaaa aatggcctgc gcgtgctgct cgccgaagat catgcagcgc cgacattttc
     1201 gatcagtgtc acctacaatg tcggctcgcg cgatgaaagg cccggccgca ccggtttcgc
     1261 gcatctcttt gagcatatgt tgtttcaagg ttcggaaaac gtcggcaagg gcgagcattt
     1321 catcttggtg cagaataacg gcggcagcgc caacggcacg accaacgcgg accgcaccaa
     1381 ctatttcgaa accctgccgt ccaaccaact ggagctgggt ctttttctcg aggcggaccg
     1441 catgcgcgcg ccggcgatca cccaggccaa cttcgacaac cagcgcttga ccgtccagga
     1501 ggagcggcgc
//
LOCUS       DATIRS010000238         1535 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1788079, whole genome shotgun sequence.
ACCESSION   DATIRS010000238 DATIRS010000000
VERSION     DATIRS010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1535
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1788079"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1535)
                     /locus_tag="VLM90_03010"
     CDS             complement(<1..>1535)
                     /locus_tag="VLM90_03010"
                     /inference="COORDINATES: protein motif:HMM:NF037959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HSQ11953.1"
                     /translation="IPVYGMRVTVYVAAGVNMLIAIVILIVDRLRDPEPVAAEAETEA
                     RSQDAASAAAQGSTYLDWVLLGSFALSGFASLVYENAWTRSLTLVIGSSIYSFTTMLV
                     TFLIGLALGGFIYARVLGNREARLSTFGLLELWVGLSALATIPLFERLPLIFVRLLHG
                     FGDTFTVFLYLQIFLSALVMFIPTILLGMTFPLVARLFTQSLYRVGSGVGSSYAANTV
                     GAVLGAFAGGFILIPHVGVQNTIIVGVVLNLLIGCWLIVSDARLSYLPRYALGLAVLI
                     LAAIVPFKVKRWDRSILTSGVTIYNDRYEALPSDSLRIEEMKRDEVLFYREGLTTTVS
                     VHKILGSDYIYFKSNGKIDGSYGDALSQLMTSYIAMMLHPKAETALTIGLGSGMSAKA
                     LATFKSLKDIEVIEIEPAMIEASKFFDRQSVRVDKFPAGVVFPADDSQGRVWYDAAEK
                     RLYYKGVMSEATRTELMNRSEDKDYRGMIDRLYRNARHSRHSSVLEDKRVRVIPTDGR
                     NYI"
BASE COUNT          375 a          462 c          423 g          275 t
ORIGIN      
        1 aatatatagt tgcgcccatc ggtgggaatc acccgcaccc gcttgtcttc caaaacgctc
       61 gagtggcgcg agtggcgggc attgcggtag agccggtcga tcatgccgcg ataatctttg
      121 tcctccgagc gattcatcaa ctcggttcgt gtggcctcgc tcatgacgcc cttataatag
      181 agacgctttt ccgccgcatc gtaccagacc cggccctggc tatcgtcggc gggaaacacg
      241 acgcctgccg ggaatttatc gacgcgcacc gactgccggt cgaaaaactt gctcgcttcg
      301 atcatcgccg gctcgatctc gatgacttcg atgtccttaa gcgacttaaa cgtcgccagc
      361 gccttggccg acatgccgct gcccagtccg atggtcagcg cggtctcggc tttcggatgc
      421 agcatcatgg cgatgtagct agtcatcaac tggctcagcg catcgccgta ggaaccgtcg
      481 attttgccgt tggatttgaa gtaaatataa tcgctgccaa ggatcttgtg gacgctgacc
      541 gtggtcgtca gcccctcgcg gtaaaatagc acctcatcgc gcttcatctc ttcgatgcgc
      601 aatgaatcac tcggcaacgc ctcgtagcga tcgttgtaaa tcgtcacgcc gctggtcagt
      661 atactgcggt cccagcgctt gaccttgaac ggtacgatcg ccgcgagaat caataccgca
      721 agcccaagcg cataacgcgg caagtaagac agccgcgcgt cgctgacaat taaccagcaa
      781 ccgatcaaca aattcagcac cacgccgacg atgatcgtgt tctgcacgcc gacgtgggga
      841 attaaaatga agccgccggc gaaggcgccg agtaccgcgc cgacagtatt cgccgcatag
      901 gaactgccga cgccgctgcc aacgcgataa aggctttggg taaacagccg cgccactaac
      961 ggaaacgtca tccccagtag aatagtcgga atgaacatca ccagcgccga cagaaaaatc
     1021 tgcaagtaaa ggaaaaccgt gaaggtatcg ccgaagccat ggagcaatcg gacaaagatc
     1081 agcggcaggc gctcgaacag cgggatcgtc gccagcgccg acaagccgac ccatagctcg
     1141 agcaggccga aggtgctcaa gcgcgcttcg cgattgccca gcacccgcgc ataaataaag
     1201 ccgcctaacg ccaggccgat aagaaacgtg accagcatgg tcgtaaacga atagatcgaa
     1261 ctgccgatga ccagggtgag cgagcgcgtc caagcatttt cataaaccaa cgaggcgaat
     1321 ccggagagcg cgaaagagcc gagcaacacc cagtcaagat aagttgagcc ttgcgccgcg
     1381 gcgctggcag cgtcctggct gcgcgcttcg gtctccgcct cagcggccac cggctcagga
     1441 tcgcgcaggc gatcgacgat tagaataacg atggcgatca gcatattgac gccggcggcg
     1501 acgtaaaccg taacgcgcat gccatagaca ggaat
//
LOCUS       DATIRS010000239         3382 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_804649, whole genome shotgun sequence.
ACCESSION   DATIRS010000239 DATIRS010000000
VERSION     DATIRS010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3382)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3382
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_804649"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..708)
                     /locus_tag="VLM90_03015"
     CDS             complement(<1..708)
                     /locus_tag="VLM90_03015"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11954.1"
                     /translation="MFYLIQLLNAVQYGLLLFLLSSGLTLIFGVMGVINLAHGSFYMV
                     GAYLTYGLAKMTGSLWLAIPIGVIIAFAIGLLLETTIIRRLYRRDHLYQVLLTFGLIL
                     VFEELRSIVFGDEVHGVAVPEILNYSIALTDTLAYPVYRLFVTAVCLAIAAILYFVIH
                     KTRAGMMIRAGNSNREMAAALGVNIPLLFALVFACGVALAAFAGAIAAPITSVAPGMG
                     NQVLILCFVVVVIGGIGS"
     gene            complement(837..2015)
                     /locus_tag="VLM90_03020"
     CDS             complement(837..2015)
                     /locus_tag="VLM90_03020"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ11955.1"
                     /translation="MKLTRRQFLTQTSLLTASALLPRSFAIAQSQKIRVGLMLPYTGT
                     FAQLGTAITNGFKLAVNERGGKLGGRELEYFTVDDEAEPSKAPENTNKLVQRDKVDVL
                     VGTVHSGVQMGMVKIAKETNTLMIIPNAGLDAATGALCAPNIFRTSFSNWQPSYPMGK
                     VLADRGIRNVVSLAWKYGAGEEAVAGFTEGFIKAGGKSVRGLWIPFPNAEFQALLTEI
                     ASIKPDAVFVFFAGAGAAKFVKDYAAAGLRKTIPLYGSGFLTDGILDAIQDSGQGLET
                     TLHYADGLNSKRDKEFRAAYTKAFTSEPDVYAVQGYDAALLLTTGLDAVKGDITKRKE
                     MIAAMEKAKIDSPRGPWTMSKAHNPIQDIYLRKVVGKENRLVSIAHKALADPARGCKL
                     "
     gene            complement(2064..>3382)
                     /locus_tag="VLM90_03025"
     CDS             complement(2064..>3382)
                     /locus_tag="VLM90_03025"
                     /inference="COORDINATES: protein motif:HMM:TIGR02262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016405 - CoA-ligase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="benzoate-CoA ligase family protein"
                     /protein_id="HSQ11956.1"
                     /translation="TVFLVAIKAGLVPIAVNTLLTVNDFDFILRDSRAQALIVAAPLL
                     PIFKPILDSQPFVKQVVVSGANESHYPTLADLLAQALCAFSAAPTRADDACFWLYSSG
                     STGTPKGVVHVQSSLIKTAELYAQPILGIQESDVVFSAAKLFFAYGLGNGLSFPLSVG
                     ATTILLSERPTPQSVCRILKEYRPTIFYGVPTLYSSLLASGELPKREESQLRRCTSAG
                     EALPPDVGRRWFDHFGVDILDGLGSTEMLHIFLSNRPDANRYGTSGKPVPGYEVRLLD
                     DDGKPVPKGELGELHINGPTSAAYYWNNRDKSRNTFLGPWTRSGDKYSESEDGSFTYG
                     GRADDMLKVSGIWVSPFEVESALSSHAAVLEAAVVGQADDNGLIKPKAFVVLRPDTPR
                     TAELAAALQQHVKGQLAPYKYPRWIEFVAELPKTATGKIQRFKLRA"
BASE COUNT          723 a          917 c         1052 g          690 t
ORIGIN      
        1 cgagccgatg ccgccgataa ccacgacgac gaagcacagg atcagaacct ggttgcccat
       61 gccgggcgcg accgacgtga tcggcgcggc gatggcgccg gcaaaggccg ccagcgccac
      121 gccgcaggcg aaaaccagag caaagagcag cggaatgttg acgcctaggg ccgcggccat
      181 ctcgcgattg ctattaccgg cgcggatcat catgccggca cgggttttgt gaatgacgaa
      241 gtacaggatg gcggcgatgg ctaaacaaac cgccgtgaca aagagacggt agacgggata
      301 ggcgagcgtg tcggttaacg caatcgaata gttcagaatt tccggcaccg cgacgccgtg
      361 aacctcatcg ccaaagacaa tgctgcgcag ctcttcaaaa accaggatca aaccgaaggt
      421 gagcaacact tgatagagat ggtcgcgccg ataaagccgg cgaatgatgg tcgtttcaag
      481 gagcaggccg atggcgaacg cgatgataac gccgatggga atagcgagcc atagactgcc
      541 ggtcattttt gccaaaccgt aggtcaggta ggcaccgacc atatagaaac tgccatgagc
      601 gagattgatc acgcccatga cgccgaagat gagggtcagg ccgctggaca gaaggaagag
      661 cagaagaccg tactggactg cgtttagtaa ctgaatcaga tagaacatcg gcgaagattt
      721 ggttccagaa gttccaaagg ttccaatcgt tccagacgga ttttctgcgt tccgcgttaa
      781 ccgagtggaa cttctggaac aggtggaact attggaacgc ggcggcgaag ccgccgctag
      841 agtttacatc cccgggctgg gtcggccagc gccttatggg ctatgctgac gaggcgattt
      901 tctttgccga caactttgcg caggtagatg tcctggatcg gattgtgtgc tttcgacatg
      961 gtccatgggc cgcgtggact atcgatcttg gctttttcca ttgctgcgat catttccttg
     1021 cgtttggtaa tatcgccttt gacagcgtcg aggccggtgg tgaggagcag tgccgcgtca
     1081 taaccttgga ctgcgtaaac atcgggttcg ctagtgaatg ctttagtgta cgcagcacgg
     1141 aactctttgt cccgtttgct gttcaatccg tcggcgtagt gcaaagtcgt ttccagtccc
     1201 tgtccggagt cctggatcgc gtccaagatg ccgtcggtca ggaaccccga gccatatagc
     1261 ggaatagttt tccgtaaacc cgcggcggca taatccttga cgaatttggc agcgccggcg
     1321 ccggcaaaaa atacgaatac cgcatcgggt ttgatcgaag cgatctccgt gagcaatgcc
     1381 tgaaattcag cgttcggaaa aggaatccac aatccgcgca ccgatttgcc gccggctttg
     1441 atgaatcctt cggtgaagcc ggcaaccgct tcttcgccgg cgccgtattt ccacgccagc
     1501 gaaacgacat tgcggatacc gcggtcggcg agcaccttac ccatcggata agatggctgc
     1561 caattggaaa atgacgtgcg aaaaatattc ggcgcgcaca acgcaccggt ggcagcatcg
     1621 agtccggcgt tggggatgat catcagcgtg ttggtttcct tggcgatctt gaccatgccc
     1681 atctgcacgc cgctgtggac ggtgccgacg agcacgtcaa ccttgtcgcg ctggaccagc
     1741 ttgttggtgt tttccggcgc ctttgacggc tcggcttcgt cgtcgacggt gaagtattcc
     1801 aattcccggc cgccgagctt gccgccgcgt tcgttgacgg ccaacttgaa accgttggtg
     1861 atggcggtgc cgagctgagc aaaggtgccg gtgtagggca gcatcaagcc gacacggatt
     1921 ttttgcgact gggcgatggc gaaggaccgc ggtaacaacg cgctcgccgt aagcaggctg
     1981 gtctgagtca ggaattgacg acgcgtaagt ttcattgtct cctccgaata gctgctcttt
     2041 ttgtgacaga aatgggatgg atttcaagcg cgcagcttga agcgttggat ttttcccgtg
     2101 gcggtcttgg gcaattcggc gacgaattca atccagcgcg ggtacttgta gggggccagt
     2161 tggcctttga catgttgctg cagggcggcg gcaagctcgg ctgtccgcgg tgtgtcggga
     2221 cggagaacca cgaaggcctt cggtttgatc aggccgttgt catcggcctg gccgaccacc
     2281 gcggcttcga gcacagcggc gtgggaactc agggccgact ccacttcaaa cggcgacacc
     2341 cagatgccgc tgactttgag catgtcgtcg gcgcggccgc cataggtgaa agagccgtct
     2401 tcgctctcgc tgtatttgtc gccgctcctg gtccaggggc cgagaaaggt gttgcggctc
     2461 ttgtcgcgat tattccagta ataggcggcg ctggtcggcc cgttaatgtg cagttcgcca
     2521 agctcgcctt ttggcaccgg cttgccgtca tcatcgagca ggcgaacttc atagcccggc
     2581 accggcttgc cggaggtgcc gtagcggttg gcgtcgggcc ggttggataa gaatatatgc
     2641 agcatctccg tggagcccaa gccgtcgaga atgtcgacgc caaagtggtc gaaccagcgc
     2701 cggccgacgt cgggcggcag agcttcgccc gccgacgtgc agcggcgcag ctgcgactct
     2761 tcgcgcttgg gcagttcgcc gctggccagg agcgagctgt acagggttgg cacgccgtag
     2821 aaaatcgtcg gccggtattc tttcaaaatc cggcaaaccg attgcggcgt cggccgctcg
     2881 ctcaacaaga tcgtagtcgc gcccaccgac agcggaaagc tcaagccgtt gcccaggccg
     2941 taggcaaaaa ataatttagc ggcggaaaac accacatcgc tttcttgaat gccgagaatc
     3001 ggttgggcgt aaagctcggc ggttttgatc aggctcgact ggacgtggac aacgcctttg
     3061 ggcgtgccgg tggatcccga agagtagagc caaaagcacg cgtcgtctgc cctggtcggt
     3121 gcggcggaaa acgcgcacaa tgcctgtgcc aataaatcgg ccagggttgg ataatgggat
     3181 tcattggcgc cggaaaccac cacctgtttg acgaacggct ggctgtcgag aatcggttta
     3241 aagatcggca agagcggcgc ggcaacgatc agcgcctgag cccggctgtc gcgcagaatg
     3301 aagtcgaagt cgttgacggt gagcagtgtg ttcaccgcaa tcggcacaag ccccgctttg
     3361 atggcgacga gaaagactgt cg
//
LOCUS       DATIRS010000240         1559 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1001863, whole genome shotgun sequence.
ACCESSION   DATIRS010000240 DATIRS010000000
VERSION     DATIRS010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1559
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1001863"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1137)
                     /locus_tag="VLM90_03030"
     CDS             complement(<1..1137)
                     /locus_tag="VLM90_03030"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ11957.1"
                     /translation="MPLTSTTRSLITLYTSTLMAGMWAMVVPTIPVLAKHFAITPGTA
                     AQLITALAFGRFAGMPISGLVLDRFGARAALIAGPLMACLSAILASFMPWFTLILVPV
                     FFIGIADSIWVIAREIAGVDLVRADQRGRVLSGFHGINYLGLAFGPLIGGLLTEHIGF
                     RSVFLAYAACAGLSTLIGWQLEASHHPVPPSPARPATMGWSIKALGQRLRGIKDLFYE
                     IRPELRATYIVLVLATFTSFAHRVTTQSIVPVFASEILHLTPKDIGLLFTISGLSVFV
                     MILPAGFVIDKVGRKWATVPSTGIPAIAFLLIPFADTFFQLAVLLSFLGIANGLSLGS
                     LATSTFDVVPVHARGRLQVLRRTLAEVGGVSAPLIGGYLVDKFNP"
BASE COUNT          378 a          423 c          478 g          280 t
ORIGIN      
        1 cggattgaac ttgtcgacca ggtaaccgcc gattagcggg gcgctgacgc cgccgacctc
       61 cgccagagtc cgtcgcagca cttgtaagcg gccccgggca tggaccggca cgacgtcgaa
      121 ggtcgaagtg gctagcgagc cgagcgatag cccgttggcg attccgagaa acgacagcag
      181 gactgccagc tggaaaaaag tgtcggcgaa ggggatcaac aaaaacgcga tggcgggtat
      241 ccccgtgctc ggcaccgtgg cccacttgcg gccgactttg tcgatgacga aaccggcggg
      301 caagatcatc acgaagaccg ataaaccgga gatggtaaac agcaggccga tgtccttggg
      361 cgttaagtga aggatctcgc tggcgaacac gggcacgatg ctttgggtcg tcacccggtg
      421 ggcgaaactg gtgaaagtgg cgagcacgag cacgatgtag gtggcgcgca gctcgggacg
      481 aatctcgtag aacagatctt tgatgccgcg cagacgttgg ccgagagctt tgatgctcca
      541 gcccattgtt gccggtctcg ctggggacgg cgggacggga tggtgactgg cttcaagctg
      601 ccaaccgatc agggtcgata acccggcgca ggccgcgtag gcgagaaaca ccgagcgaaa
      661 accgatatgc tcggtgagca aaccgccgat cagcgggccg aaggcgaggc ccaaataatt
      721 gatgccgtga aagccgctca acactcggcc gcgttgatcg gcgcgcacca ggtcgacgcc
      781 ggcgatctcg cgggcgatca cccaaatact gtcggcgatg ccgatgaaaa acaccggcac
      841 tagaattaac gtgaaccatg gcatgaacga cgcgaggatc gccgataggc aagccatcaa
      901 tggcccggcg atcaacgccg cgcgcgcgcc gaagcgatcg aggacaaggc cgctgatcgg
      961 catgccggca aagcgaccga aggcaagcgc ggtgatcaac tgcgccgccg tgccgggtgt
     1021 gatggcaaaa tgtttggcca ataccggaat cgtcggcacc accatcgccc acatgccggc
     1081 catcagtgtg ctggtgtaaa gtgtgatcag gctgcgagtc gtcgatgtga gcggcatggg
     1141 tgtcgtgcga gggtgactgc tttatgccca attgcggtgc ttggataaac atcgatttac
     1201 accaagaacg caccaagagc acgaaggtac cgaatgcatt atatgccgaa cttcgtatcc
     1261 ttcgtacaac tatccaaaaa ctaacaccaa catgttggtc atagcgtgcg gctttaatat
     1321 tccgggagtc gaagattctc ggattcggaa attcctctcg ccaaggcgca aagacgccaa
     1381 gttcggaaag gaaaaaaagg actcttacga acggtcttca ccattttatt ttccgacctt
     1441 tgcgagctta gcgcctttgc gagagatatt ccgagtttcg attgcagctg ttcgccgaca
     1501 ggcgaacctc atttcccagc gaagtctggg gaaaagcgtg aattactatc cgtgatagt
//
LOCUS       DATIRS010000241         1536 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_804753, whole genome shotgun sequence.
ACCESSION   DATIRS010000241 DATIRS010000000
VERSION     DATIRS010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1536
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_804753"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(40..>1536)
                     /gene="pnp"
                     /locus_tag="VLM90_03035"
     CDS             complement(40..>1536)
                     /gene="pnp"
                     /locus_tag="VLM90_03035"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR03591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HSQ11958.1"
                     /translation="GHEAIQPLLQIQEDFRRDIGKAKRHVPLAEIDGAVKRRVEELAL
                     AKLKQALEVPEKLERYKRIAEVKGEVVPQALAEFPDKQKDIKNAFEDLKKNVFRGLVI
                     HQERRIDGRGLKDIRPISCEVEVLPRTHGSALFTRGETQALVVTTLGTASDEQRVDAL
                     IGEHFKKFMLHYNFPPFSVGEVKFLRGPGRREIGHGNLAERALVPVLPLEENFPYTIR
                     IVSEILESNGSTSMASVCGGSLSLMDAGVPVVAPVAGIAMGLIKEGEHVRILSDILGD
                     EDHLGDMDFKVAGTSDGVTSLQMDIKISGVNREIMSQALHQAKEGRLHILGIMNGTLS
                     SARTDVSGHAPRITTIKVKPDTIREIIGPGGKVIRGIIEATGVKMDVEDDGTVTIASS
                     DAAASQKAIEMVQRIAAEAEIGKIYKGTVRKIVEFGAFVEILPGTDGLVHISQLAPQR
                     VNKVTDVLKEGDEVMVKVLEIDRQGKIRLSRKEALQETGGGASNTPQP"
BASE COUNT          268 a          476 c          442 g          350 t
ORIGIN      
        1 acggtcttgg caaacatcgt gggtcgtgga attcgggcgc tacggttgcg gcgtgttgct
       61 cgcgccgccg ccggtttcct ggagcgcctc ttttcggctc agccggatct tgccctggcg
      121 atcgatttcc aggactttga ccatcacctc atcaccttcc ttgagcacgt cggtcacctt
      181 gttaactcgc tggggagcga gctgcgaaat gtgcacgagt ccatccgtgc cgggcaggat
      241 ctcgacgaag gcgccgaact cgacgatctt acgcaccgtg cctttgtaga ttttgccgat
      301 ctcggcttcc gcggcgatcc gttgcaccat ctcgatggcc ttctgcgagg ccgccgcgtc
      361 gctggaggcg atcgtcaccg tgccgtcgtc ttcgacgtcc atcttgacgc cggtggcttc
      421 gatgataccg cggatgactt tgccgcccgg tccgatgatt tcccggatcg tgtccggttt
      481 gaccttaatt gtggtgatgc gcggcgcgtg accggaaaca tcggtgcgcg ccgaagagag
      541 cgtgccgttc atgatgccga gaatatgcaa gcgcccttcc ttggcctgat gcagcgcctg
      601 gctcataatc tcgcggttga ccccgctgat tttgatatcc atctgcagcg aggtgacgcc
      661 gtcggaagtg ccggcgactt tgaaatccat atcgcccaaa tggtcttcgt cgccgaggat
      721 gtcggacagg atgcgcacat gctcgccttc tttgatcaag cccatggcga tgcccgccac
      781 cggcgccacc accggcaccc ccgcgtccat cagcgacagc gagccgccgc atacgctcgc
      841 catggaggtc gagccgttcg attccaaaat ctcggaaacg atccgtatgg tgtaaggaaa
      901 attttcctca agaggcaaga ccggaacaag cgcgcgttcg gcgagattgc cgtgaccgat
      961 ctcgcgccgg ccggggccgc gcagaaattt cacttcgccg acgctgaacg gcggaaaatt
     1021 ataatggagc atgaatttct tgaaatgctc gccgatcaaa gcatcgactc gttgctcgtc
     1081 cgacgccgtg cccaaggtgg tgaccaccag cgcttgggtt tcgccgcgcg tgaataacgc
     1141 cgagccgtgg gtacgcggca acacttccac ttcgcagctg atcggccgga tgtctttcaa
     1201 gccgcgaccg tcgatgcgcc gctcctggtg aatcaccagt ccgcgaaaga cgtttttctt
     1261 taaatcttcg aaggcatttt taatatcctt ttgcttatcg ggaaactccg ccagggcctg
     1321 cggcaccacc tcgcccttga cttcggcgat gcgcttgtag cgttccagtt tctccggcac
     1381 ttcgagggcc tgtttgagct tggccagggc cagctcttcg actcggcgtt tgaccgcgcc
     1441 atcgatctcg gcgagcggca catgtctttt cgctttgccg atatcgcggc gaaaatcctc
     1501 ctggatttgc agcagcggct ggatcgcctc gtggcc
//
LOCUS       DATIRS010000242         3230 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_706963, whole genome shotgun sequence.
ACCESSION   DATIRS010000242 DATIRS010000000
VERSION     DATIRS010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3230
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_706963"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            465..1130
                     /locus_tag="VLM90_03040"
     CDS             465..1130
                     /locus_tag="VLM90_03040"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: protein motif:HMM:NF001453.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HSQ11959.1"
                     /translation="MKNPEPIAHDFAWARDRMVQEQILARGVTDARVIAAIRKIPRHV
                     FVDPGIVNRAYDDSALPIGEKQTLSQPYMSARMSEALRLVGGEKVLEIGTGSGFQTAL
                     LAELCFNVFSVEKLRALSRRARALLDQLEYHNIALHVGDGTIGWSEHAPYHAIIVTAG
                     APQAPQPLLDQLAVGGRLVIPIGDEQSQTLMRLTRTRTSFKKEQLGECKFVKLLGKYG
                     WRE"
     gene            1321..1962
                     /locus_tag="VLM90_03045"
     CDS             1321..1962
                     /locus_tag="VLM90_03045"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing M23
                     family metallopeptidase"
                     /protein_id="HSQ11960.1"
                     /translation="MFHVVKPGENLFRIGKAYDVSLAELAKANRLKHASQIYVGQKLL
                     IPGAHRQLPVDTIAPLETAPVSRTQPPSADFGGDPLLWPVSGRINSNYGPRGSSFHDG
                     IDIAAPEGTPIHAIERGEVIYSDQLRGYGNIVILRHPGGIVSVYAHNQVNLVREGQPV
                     SRGEVIAKVGSTGRVTGPHLHLEIRQNNTAQDPLRYLPQLCCLSASDNVAPKD"
     gene            1975..3123
                     /locus_tag="VLM90_03050"
     CDS             1975..3123
                     /locus_tag="VLM90_03050"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11961.1"
                     /translation="MKELATVRNDVVGSLLRPAQLKAARQQFDEGALSLEGLRQIEDQ
                     GIRDAVKLQEEVGLAVVTDGEYRRLNFQDSFGESVTGYDAGKPSLKLYERRVEGSSPL
                     RRWEIPDQGEQKGTAVAQRRPVLAKLGLARNVPAEEFRFLKQITGKPGKVALIGPDRI
                     AQRFDWQNSTGVYSGLNEFVDDVVKVERQIIGGLVDGGCRYVQIDAPGYTAYVDPPSL
                     AAMRARGEDPQANFSRSLKADNAVLAGFDAVTFGIHLCRGNQRSMWHREGTYDEIAER
                     LLNELHHDRFLFEYDTPRAGGFEPLRFLPKGKVIVLGLVSTKVAELETVDELKRRIDG
                     AAKYAPLDQIAISPQCGFSSDVVGNLISDDDQKRKLAVVVETARQVWG"
BASE COUNT          647 a          919 c         1010 g          654 t
ORIGIN      
        1 acgagtcact cgcggcgacg cgcgagaagc cggttcagcg ggacggcgac cggagcgccg
       61 tgcccgcgtg ggggttcgga gccggccgaa gcaggtctca tggcccgcct gcgctagcta
      121 gaggatttgg ccagactcta agaaaaaagc ctgcgcaact cgatagcgcc gccgataaac
      181 tggaaaatcg tcccgcaatt gtgttaaatt ccctgattga atctaaacat tccccgcagc
      241 ttgctgcggg caccctaaaa tggggaatcc aaagggggcg aacatcccct ttggtcgcgt
      301 gcgggtttga taccccgtac gcgaaatgcc ttgtttcttg gagtgcggct agcgcttttt
      361 taccgtaccg tgttaaccaa cgatccagcg tgtttctgcc aggcgaatgc gccaatgctg
      421 cgacgtagca ttgcggcatg ccggaaccca taatcccaac ctaagtgaag aatcccgaac
      481 cgatcgcgca tgatttcgcc tgggcccgcg accgcatggt ccaggagcaa attctcgccc
      541 gcggcgtgac cgacgcccgg gtgatcgcgg cgatacggaa gattccacgc catgtcttcg
      601 tcgatcctgg aatcgtcaat cgcgcctatg acgatagcgc cttgccgatc ggcgagaagc
      661 agactttgtc gcaaccctat atgtcggcgc gcatgagcga ggcgctgcgt ctggtcggcg
      721 gcgaaaaagt gctcgagatc ggcactgggt caggttttca aaccgcgctt ctggccgagc
      781 tctgcttcaa tgttttttcc gtcgaaaagc tgcgcgcgct gtcgcgccgg gcgcgcgcgc
      841 ttctggatca gctcgagtat cacaacatcg cgctccatgt cggcgatggc actatcggtt
      901 ggtccgagca tgcgccttac cacgcgatta tcgtgactgc cggagcgccg caagcgcccc
      961 agccgctgct cgatcagctc gccgtcggcg gccggctggt gatcccgatc ggcgatgagc
     1021 agtcacagac cctgatgcgt ttgactcgaa cccgtacgag tttcaaaaaa gagcagctcg
     1081 gcgaatgtaa gttcgtcaag ctattgggca aatatggctg gcgcgagtag cgctaccatt
     1141 gctaagtatt gtcgggatta tctctttggg tttgccagct tcggaagtgc gtccatcgca
     1201 gtgaattcca tgattttccg gttacgatgg ctctgggccg gcctcgctgt tctcgcgctg
     1261 ggcggttgcg cgtcgtccaa gagtcgcccg ccagcaccgc cgttcaggcc ggcgtcgaat
     1321 gtgtttcatg tagtcaaacc gggtgagaat ctattccgca tcggcaaagc gtacgatgtt
     1381 tctttagccg agttggccaa agcgaatcgg ctgaagcatg cgagtcaaat ctacgtcggc
     1441 cagaaactct tgatccccgg cgcccaccgg caattgccgg tggataccat cgctccgctg
     1501 gagacggcgc cggtgtcgcg tacgcagccg ccgtccgccg actttggcgg cgatccgtta
     1561 ctctggcccg tgagtggcag gatcaattcc aactatggtc cgcgcggttc aagttttcac
     1621 gacggtatcg atatcgccgc gccggaaggg acgccgatcc atgcgatcga gcgcggtgaa
     1681 gttatctata gcgatcagct gcgcggctat ggcaatatcg tcatcctgcg ccatccaggc
     1741 gggatagttt cggtttacgc ccataaccaa gtgaatctcg tgcgcgaagg ccagccggtg
     1801 agcaggggcg aggtgattgc caaggtcggc agcaccggac gggtgactgg gccgcatctg
     1861 catttggaaa ttcgccagaa caatacggca caagacccgc tgcgttacct gccgcagttg
     1921 tgctgcttat cggcatccga taatgtggcg ccgaaagatt agaggttctc catcatgaaa
     1981 gagttggcga cggttagaaa cgatgtggtc gggagcctgc tgcggccggc gcaacttaaa
     2041 gcggcgcggc agcagtttga cgagggcgcg ttatcgctcg agggattgcg ccagattgaa
     2101 gatcaaggaa ttcgcgacgc ggtcaagctg caagaagaag tcggcctggc ggtagtcacc
     2161 gacggcgagt accgccggct caatttccaa gacagtttcg gcgaatcggt gaccgggtac
     2221 gatgccggca agcccagtct aaaactctac gagcggcggg tggaggggag cagtccgctg
     2281 cgccgttggg agatccccga tcagggcgag cagaaaggca ccgcggtggc gcagcgacgg
     2341 ccggtgctgg cgaagctcgg attggcgcgt aatgtgccgg cggaagaatt tcggttcctg
     2401 aagcaaatca ccggcaaacc cggcaaggtc gctttgatcg gtccggatcg gatcgcgcag
     2461 cgattcgatt ggcagaattc taccggcgtc tattcgggac tcaacgagtt cgtcgacgac
     2521 gtggtcaaag tggagcgcca gatcattggc ggcttggtcg atggcggatg ccgctatgtg
     2581 cagatcgacg cgccgggcta tacggcctac gtcgatccgc cgtcgctcgc cgccatgcgg
     2641 gctcgcggcg aggatccgca ggcaaatttc agccgctcgc taaaagccga taacgcggtg
     2701 ctcgccggct tcgacgccgt cactttcggc attcacttat gccgcggcaa tcagcgcagc
     2761 atgtggcatc gcgaaggcac ctacgatgaa atcgccgagc ggctgctcaa tgagctgcat
     2821 catgaccggt ttctctttga atacgatacg ccgcgcgccg gcggctttga acccttgcgc
     2881 tttttgccca agggcaaggt catcgttctc ggcttggtca gcaccaaggt ggccgagctt
     2941 gagaccgtcg acgaactcaa gcggcgcatc gatggcgccg ccaagtacgc gccgctcgac
     3001 cagatcgcca ttagcccgca gtgcggtttt tcctcggatg tggtcggtaa tctaattagc
     3061 gacgacgatc agaagcgcaa gctcgcagtg gtggtggaaa cggcgcggca ggtttggggc
     3121 taggcctcgc agcgcgaggc acggaagatt gcaaatttca gattccggag tttcgagagg
     3181 tagctgggta tgggtgacga tattgccagt attcgcagcg cgattcgcga
//
LOCUS       DATIRS010000243         1660 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_707026, whole genome shotgun sequence.
ACCESSION   DATIRS010000243 DATIRS010000000
VERSION     DATIRS010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1660
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_707026"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(258..1352)
                     /locus_tag="VLM90_03055"
     CDS             complement(258..1352)
                     /locus_tag="VLM90_03055"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HSQ11962.1"
                     /translation="MASVRGATLLGPDKLEVREYPMPDIPADGGLIKIEMGGVCGTDV
                     KYLHGKLKVDYPIILGHEILGRVEKLGKNAAAIHHVREGDRVILKGALGCGRCADCRR
                     NNQRFCRQRTNYGGRTKCDKPPNLFGGFADYLYLAPDVLCTKVSDSLPAEAAALIGSV
                     MANGFQWAIRRGGVKMGDYVLIQGPGQQGLSCTFASKHAGAAKIFITGIGRDKPRLEL
                     AKKFGATRTINVEEEDVVEVIRKETNGELCDVVVDVSGNPNAILKSVDCLHRQSTMVL
                     GGLTGDTTVTPMLMDKLVWNEIKLQGCFTADNDATEAALRIIEATKFPVQEMVSHVFP
                     LKDIEKCIRAIGGEIPEMFPTKALINPAIG"
BASE COUNT          340 a          473 c          465 g          382 t
ORIGIN      
        1 ggatgattcc cgcactgaaa gaccgagtcg tcatcggcga tggcgatcct cgcgccggct
       61 ttggcaaatg ctaacgcgta ggctgtgccg atgccgtgcg cgccgccggt gacgatgacg
      121 actcggtctt tcagtgcggg aatcatccga gtcgcgaagg agtattggag tgatggagaa
      181 atggagcgtt gggaagagca gcggaaatct tcggacccag cttcccatta ctccaatact
      241 ccatcacgcc attcctctca cccgatggcc ggattgatca acgctttggt cgggaacatt
      301 tcgggaatct cgccgccgat ggcgcgaatg cacttttcga tatccttcag cggaaaaaca
      361 tggctgacca tttcctgcac cggaaacttg gtcgcctcaa ttatacgcaa cgccgcttca
      421 gtggcgtcgt tatcggcggt gaagcagccc tggagtttaa tctcgttcca aaccagttta
      481 tccatgagca tcggcgttac ggttgtgtcg ccggtcaagc cgccgaggac catcgtcgac
      541 tggcggtgca ggcagtcgac ggacttgaga atcgcgttgg gattgccgga tacatcgacg
      601 acgacgtcac acagctcccc gttggtttcc ttgcggatca cttcgacgac atcttcttct
      661 tcgacgttga tagttctcgt cgcgccgaat ttcttggcca actccaagcg gggcttgtcg
      721 cggccgatgc cggtgatgaa aattttcgcc gcgccggcat gcttggacgc gaaggtgcac
      781 gagagccctt gctgacccgg accttggatc aaaacataat cgcccatctt cacgccgccg
      841 cggcgaatcg cccattgaaa gccgttggcc attaccgagc cgatcagcgc cgctgcttcg
      901 gcgggaagcg aatcgcttac tttggtgcag aggacatcgg gtgccaagta aagatagtcg
      961 gcaaagccgc cgaacagatt cggcggttta tcgcacttgg tgcggccgcc ataattggtc
     1021 cgttgccggc aaaagcgctg gttgttgcgc cggcaatcgg cgcagcggcc gcagccgaga
     1081 gcgcccttga ggataacacg gtcgccttct cttacatggt gaatcgccgc ggcgttcttg
     1141 ccgagtttct cgacgcggcc gagaatctca tggccgagga tgatcggata atcgactttg
     1201 agcttgccgt gcaaatattt gacgtccgtg ccgcacacgc cgcccatttc tatttttatc
     1261 agcccgccat cggccggaat gtcaggcatc ggatattcgc ggacctcgag tttgtctggg
     1321 ccaagtaatg tcgctcctcg tacgcttgcc atggaaacct ccagtgccct gaatcagttc
     1381 attctatctg agagatcctt cacttcgtca gactgtgtga aaacaccgtc catggttccc
     1441 ttcggcttcg ctcagggcag gctggctcac cacgaacggt ttggttctat tagaacttga
     1501 gtacttagcc gttcgccctg agcgctgtcg aagggctccg aaacagtttt cacagagtct
     1561 gaacgaagtg aagaatctat ctgcttcagt aagatcgggt taaagcagat tcttcggcct
     1621 acggcctcag aatgacacgc tcgcgctggc acagaacgtc
//
LOCUS       DATIRS010000244         2781 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_116579, whole genome shotgun sequence.
ACCESSION   DATIRS010000244 DATIRS010000000
VERSION     DATIRS010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2781
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116579"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1140
                     /locus_tag="VLM90_03060"
     CDS             <1..1140
                     /locus_tag="VLM90_03060"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSQ11963.1"
                     /translation="TTIFADINALAAKHGAVNLGQGAPDFDGPPEVLAAAVAAVNGAL
                     NQYAPGNGMASVRQAITQHAQRFYNQQLNPDTDVLVTSGATEAMFAAILGLTDPGDEV
                     IVFEPVYDTYVPNLVMAGVTPHYVALRGEEWRFDADELAKAFNSRTKAIVINTPHNPT
                     GKVFSRDELRSIAELCHKHNVVAITDEVYEHIVYDDGSHVRLATLPGMAERALTISSL
                     GKTFSVTGWKIGWAMGPAALVQAVNQAHQFITYAVAAPLQAAAATALNLPFGYFENLQ
                     SSYQARRDRMLKVLGSAGFTVFKPQGSYFIMIDWRGVAPGHVQDDMQFARWLIEEIGV
                     ACIPASPFYQESDKHLGKSFARFAVCKKDETLDAAAERFAKLGKM"
     gene            1209..1775
                     /locus_tag="VLM90_03065"
     CDS             1209..1775
                     /locus_tag="VLM90_03065"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSQ11964.1"
                     /translation="MNLFHRLILAVVVFAAVQTPARSQEPIPYVPSTMPVVAKMLELA
                     SVTKDDIVYDMGCGDGRILIMAAKQFGARGVGIDLDPVRIAEAKKNAEQEGVSHLVEF
                     RAEDGTKTDISKATVVTLYMFKWFNNAISPKLQKLRPGSRVVAHDFDIDDWKPAAVVN
                     LDAEKNGHEGIERPHTLYLWLVGTEQRP"
     gene            complement(2050..>2781)
                     /locus_tag="VLM90_03070"
     CDS             complement(2050..>2781)
                     /locus_tag="VLM90_03070"
                     /inference="COORDINATES: protein motif:HMM:NF024739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ11965.1"
                     /translation="FTIWNELTRGKLIMKYDSPERAKYPDALKDADGYWNILHLGVQG
                     MAYNTKLVSPDLAPKKYEDLLLPRWRPKQIAMDYRDSSWMAVMLEIMGDAEGLAFMKK
                     LAAKDLYMRENKNLLTQLLAAGEFPVLANTYLETFAKIQKAGAPIEWVPGRNPIPAST
                     HLLGVYAHARHPNAAKLFVDFLLSPEGQSLTANVIGSYPANPSVESELRKKTAGYRLH
                     PVNPKMMARFDEVNKQYMEIFWKNP"
BASE COUNT          556 a          771 c          865 g          589 t
ORIGIN      
        1 acgacgatat ttgccgacat taacgctctg gcggccaagc atggcgcggt caatctcggc
       61 cagggcgcgc cggatttcga cgggccgccg gaagtgttgg cggcggcggt tgcggcggtc
      121 aatggcgcgc tcaatcagta cgctcccggt aacggcatgg cgtcggtgcg ccaggcgatc
      181 acccaacatg cgcagcgctt ttacaaccag caactgaatc ccgacaccga tgtgctggtg
      241 acttctggcg cgaccgaggc gatgtttgcg gcgattctcg gtttgaccga ccccggcgat
      301 gaggtgatcg tcttcgagcc ggtctacgac acctatgtgc ccaacctggt catggccggc
      361 gtgacgccgc attatgtcgc gctgcgcggc gaggaatggc gcttcgatgc agacgaactg
      421 gccaaggcct ttaactcgcg gaccaaggcg atcgtcatca acacgccgca taatcccacc
      481 ggcaaagtct tttcgcgcga cgagctgcgg tcgatcgccg agctgtgtca caagcacaac
      541 gtggtcgcca tcaccgatga agtttacgaa catatcgttt acgacgatgg cagccatgtg
      601 cggctggcga cactccccgg tatggctgag cgcgcgctga cgatcagtag cctgggcaag
      661 acgttcagcg tcaccggttg gaaaatcggc tgggccatgg gaccggcggc tttagtacag
      721 gcggtcaacc aggcgcatca gttcattacc tacgccgtgg ccgcgccgct acaagctgct
      781 gcggcgacgg cgctcaattt gccgttcgga tattttgaaa acttgcagtc gagttatcaa
      841 gccaggcgcg atcgtatgct caaggtcttg ggcagcgccg gtttcacagt cttcaagcct
      901 cagggcagct acttcatcat gatcgactgg cgcggcgtgg cgccgggtca tgtgcaagac
      961 gatatgcagt tcgcccgctg gctgattgaa gagattggcg tcgcctgtat cccggcgagc
     1021 ccattttacc aggagtccga caagcacttg ggcaaatctt tcgcccgctt cgcggtctgc
     1081 aagaaagatg aaaccttgga cgccgctgcg gaacgatttg ccaagctcgg gaaaatgtga
     1141 gaattcacgt attcgacttg gcagcgagag gttcggggtt tcagaaacaa aattttcgag
     1201 gggacaggat gaacctattt cacaggttga ttttggcggt agtggtcttc gcggcggttc
     1261 agactccggc tcggtctcag gaaccgatcc cctacgtgcc gagcacgatg ccggtggtgg
     1321 cgaagatgct tgagctggcg tcggtgacca aggacgacat cgtttacgac atgggttgcg
     1381 gcgacggacg gatcttgatc atggcggcga aacaatttgg cgcccgcggc gtcggcatcg
     1441 atctcgatcc ggtgcgcatc gccgaagcga agaaaaatgc cgaacaggaa ggggtcagcc
     1501 atctggtcga gttccgcgcc gaagacggca ccaagaccga tatctccaaa gcgacggtgg
     1561 tgacactcta catgttcaag tggttcaaca acgcgatcag tcccaagctg caaaagctcc
     1621 ggcccggctc gcgagtggtc gcccatgatt tcgatatcga cgattggaaa ccggccgcgg
     1681 tggtaaatct ggacgccgag aaaaacggcc atgagggtat cgagcggccg cacacgctct
     1741 atctgtggct cgtcggcact gaacaacggc cctagccgcc gcgcgaaaaa atcgccgaat
     1801 gccttcggcg ctgcaaactt tagcggtcca gttctcgcag gtgactgtca ggggtgggtc
     1861 tcgaagttat cattggcccg cgttgcgcct gatccaggct ctgtccactg ccagcaagcg
     1921 atttctcgga atgggatgtg tttgtcgtag acctcgcgcc atgccggcag cagcggcggg
     1981 cgaagcgaat ctgaagtgcc gccggggtaa attcacagcg actgacaaac actttcgctg
     2041 gtggcacacc tacggatttt tccagaagat ttccatgtac tgtttgttga cctcgtcgaa
     2101 gcgcgccatc atcttcgggt tgaccggatg gaggcggtag ccggcggttt ttttgcgcag
     2161 ctccgattcg acgctgggat tggccgggta actgccgatg acattggcgg tgagactctg
     2221 tccttctggc gacagcagga aatcgacgaa tagcttggcg gcgttgggat ggcgcgcgtg
     2281 ggcgtagacg ccgagcaggt gggtcgacgc cggaatcgga tttctgcccg gcacccattc
     2341 aatgggcgcg ccggcttttt ggatcttcgc gaaggtttcc aagtaggtgt tggccagcac
     2401 cgggaactcg ccggcggcga gcagctgggt cagcaggttc ttgttctcgc gcatgtataa
     2461 atctttggcg gcaagctttt tcatgaatgc cagcccttcc gcatcgccca tgatctccaa
     2521 catcaccgcc atccacgagc tgtcgcggta atccatggcg atctgcttag ggcgccagcg
     2581 cggcagcagc agatcttcgt attttttcgg tgcgagatcg ggtgaaacaa gtttggtgtt
     2641 gtaagccatg ccttggacgc ccaggtggag aatattccag tagccgtcgg catccttgag
     2701 cgcgtcggga tatttggcac gctccggcga gtcgtatttc atgattagct tgccgcgggt
     2761 gagctcgttc cagatggtga a
//
LOCUS       DATIRS010000245         3451 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1002185, whole genome shotgun sequence.
ACCESSION   DATIRS010000245 DATIRS010000000
VERSION     DATIRS010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3451)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3451)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3451
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1002185"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..223)
                     /locus_tag="VLM90_03075"
     CDS             complement(<1..223)
                     /locus_tag="VLM90_03075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11966.1"
                     /translation="MEVIRWEPFEGISRLHSRINDLFAESVGRAHALPSATAGAWLPL
                     VDILESKDAYLIRAEIPGMKKEDFHLEVND"
     gene            372..1508
                     /locus_tag="VLM90_03080"
     CDS             372..1508
                     /locus_tag="VLM90_03080"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HSQ11967.1"
                     /translation="MSKPGSELSISRCRKYLWPVVALSSVVILLAQQAWLGGATLNNP
                     KTAARAVTPRGDLMAEEKSTIALFKQASPAVLNITSIGIERDMFTLNQYQMPQGTGSG
                     FIWDNTGNVITNFHVIQNADAAQVTLADQSAYKARVVGVAPDKDLAVLKIDAPTAKLQ
                     AIPLGTSKDLQVGQSVFAIGNPFGLDQTLTTGVISALNREIESLTRRPIQGVIQSDAA
                     INPGNSGGPLLDSAGRLIGVNTAIYSPSGVSAGIGFAIPVDTVNRIVTELIRFGKVVR
                     PGFGVQVADEQIAQRLNVTGVLIVDVARGSAAAKAGIQPTRRDNTGRVRLGDIITAID
                     GKKIESPNDLFLALEKYKVGDAVNVSVLRNDKTVQLKIALEAVQ"
     gene            complement(1544..2569)
                     /locus_tag="VLM90_03085"
     CDS             complement(1544..2569)
                     /locus_tag="VLM90_03085"
                     /inference="COORDINATES: protein motif:HMM:NF014605.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HSQ11968.1"
                     /translation="MKDEKTQAANRVEEIGVNQIEFHDPRLFRDLLGQHDQHVKILQN
                     TLQLKIRVRGSAMEIEGDPLQVELASQILRQLYSLLEKGYPVYASDVDYAIRILSGDN
                     RAKLQDIFLDTIYISAHKRTITPKSIAQKAYIDAIRRYDIVFGVGPAGTGKTYLAMAM
                     AVAELMKNNYVRIILTRPAVEAGEKLGFLPGDLAEKVNPYLRPLYDALHDMVEFDRAR
                     KMVERGTIEVAPLAFMRGRTLNDSFVILDEAQNTTPEQMKMFLTRLGYGSKAVITGDA
                     TQIDLPAGKASGLKEAARILRGVQGIRFVTFTEKDVARHHLVQEIIAAYERDDNQNNA
                     RDLLEKN"
     gene            complement(2566..2994)
                     /locus_tag="VLM90_03090"
     CDS             complement(2566..2994)
                     /locus_tag="VLM90_03090"
                     /inference="COORDINATES: protein motif:HMM:TIGR00149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="secondary thiamine-phosphate synthase enzyme
                     YjbQ"
                     /protein_id="HSQ11969.1"
                     /translation="MITIHTKTITESTAGCCDIVDITAKLKEQIRAVNMRNGTATLFV
                     NGSTAALTTLEYEPGLVQDLQEFLEKHIPADRRYHHDERWNDDNGFSHLRATLFGPSL
                     AIPVVDGAPTLGTWQQIILMDFDNRPRNREVIVQLIGECE"
     gene            complement(3097..>3451)
                     /locus_tag="VLM90_03095"
     CDS             complement(3097..>3451)
                     /locus_tag="VLM90_03095"
                     /inference="COORDINATES: protein motif:HMM:NF014342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DHHA1 domain-containing protein"
                     /protein_id="HSQ11970.1"
                     /translation="PELLARQQTVSGNKTLIAQIDDVDGKHLREIADQLKAKLGSGIV
                     VLASASDGTVSLVASVSKDLTKKFHAGNIIKELAGMVGGGGGGRPDFAQAGGKEPEKI
                     AAALKRAEEIVKQVS"
BASE COUNT          680 a          949 c         1032 g          790 t
ORIGIN      
        1 cgtcattgac ttctaagtgg aagtcttcct tcttcatgcc agggatctca gcgcggatta
       61 agtacgcgtc tttgctttcc agaatatcca ccagcggtaa ccatgcgccg gcagtcgcgg
      121 atggtaacgc gtgcgcccgc ccgacgctct cggcgaatag atcgttgatc cggctatgca
      181 gccgacttat accctcaaac ggttcccatc ttatgacttc catatttacc cctcctttca
      241 agggagtttt ttgagatgtc ggaaagctaa acacggagcg gcacgctgtc aatcagcttg
      301 acaaaaccgt ccggtgtaac tagcttttac ggattgtcca gtgcggatct aagcttacga
      361 caaggaaaat tatgagcaaa ccaggttctg aactgtcaat ttcgcgttgc aggaagtatc
      421 tctggccggt ggtcgcgttg tcatcggtgg tcattctgct ggcacagcag gcctggttgg
      481 gcggcgccac actcaacaat cccaagacgg cggcgcgcgc ggtgacgcca cgcggcgatc
      541 tgatggccga agagaaatcc accattgcgc tgttcaagca ggcgtcacct gcggtgctca
      601 atatcacgtc catcggcatc gagcgcgaca tgttcaccct caaccagtat cagatgcccc
      661 agggtaccgg ttccggtttt atctgggaca ataccggtaa cgtgattacc aactttcatg
      721 tgattcaaaa cgccgacgcg gcgcaggtga cgttggcgga tcagtcagcg tacaaagcgc
      781 gggtggtcgg cgtggcgccg gacaaagatt tggcggtgtt gaagatcgac gcgccgaccg
      841 ccaagctaca ggcgattccg ctgggcacct cgaaagactt gcaagtggga cagagtgtct
      901 ttgccatcgg caatcccttc ggtctcgacc agacgcttac caccggcgtg atcagcgcac
      961 tcaatcgtga gatcgagtcg ctgacgcggc ggccgatcca aggcgtgatt caatccgacg
     1021 cggcgattaa tccgggaaat tccggcggcc ctttgctcga cagcgccggc cgactgatcg
     1081 gtgtcaacac ggcgatctac agtccgtccg gcgtatcggc gggaatcggt ttcgccattc
     1141 ccgtcgatac ggtcaaccgc atcgtcaccg aattgattcg tttcggcaaa gtcgtcagac
     1201 ccggtttcgg ggtgcaggta gccgacgaac aaatcgccca acgtttgaac gtgaccggcg
     1261 tgttgatcgt cgatgtggcg cgcggcagcg ccgcggcgaa ggctggcatt cagccgacac
     1321 ggcgggataa taccggcagg gtgcggctgg gcgatatcat caccgccatc gatggcaaaa
     1381 aaatcgagtc gcccaacgat ctgtttctgg ctttggagaa atacaaggtc ggtgatgccg
     1441 taaacgtttc ggtgctgcgc aacgacaaaa cggtccagct gaagatcgca ttggaagcgg
     1501 ttcagtagaa tcctaccggc gaatcggtca gcgaactatc cgttcagttt ttttccagaa
     1561 ggtcgcgagc gttgttttga ttatcgtcgc gctcgtaggc ggcgatgatc tcctggacga
     1621 ggtgatggcg cgccacgtcc ttttcggtaa acgtgacgaa gcggatgccc tgcacgccac
     1681 gcaagatccg ggcggcttct ttgagtcccg aggccttgcc cgcgggcaaa tcgatctggg
     1741 tggcatcgcc ggtgatcacc gccttggatc cgtagccgag gcgggtcaga aacattttca
     1801 tctgctccgg cgtggtattc tgcgcttcgt cgagtatcac gaaggaatcg ttaagcgtcc
     1861 ggccgcgcat gaacgccagc ggcgctactt caatcgtccc gcgctcgacc attttgcggg
     1921 cgcggtcgaa ttcgaccatg tcatggagcg cgtcatagag tgggcgcaga tacgggttga
     1981 ccttttccgc caaatccccg ggcagaaagc ctaatttttc gccggcctcg acggccggcc
     2041 gggtgagaat gatgcgcacg taattattct tcattaactc ggccacggcc atcgccatgg
     2101 cgaggtaggt cttgccggtg ccggctggac cgacgccaaa gacgatgtcg tagcggcgga
     2161 tggcatcgat ataagctttt tgcgcgatgc ttttcggcgt gatcgtgcgc ttgtgcgcgg
     2221 atatatagat cgtgtcgaga aatatatctt gcagcttggc gcggttatcg ccgctcaaga
     2281 tgcggatggc gtagtcgacg tcgctggcgt aaaccgggta gcctttttcc aaaagactgt
     2341 agagttgccg caggatttgg ctcgccagtt cgacttgcag cgggtcgcct tcgatctcca
     2401 ttgctgagcc gcgtacgcga attttgagct gtaaggtgtt ctgaagaatt ttgacatgct
     2461 ggtcatgttg gccgagcaga tcgcggaaca aacgcggatc gtgaaactcg atctggttga
     2521 cgccgatttc ctcgactcga ttggcggcct gagttttttc gtctttcact cgcattctcc
     2581 tatgagctga acgatgactt cacggttgcg cgggcggttg tcgaagtcca tcaagatgat
     2641 ctgttgccaa gttcccagag tcggcgcgcc gtcaacgacc gggatcgcca acgaggggcc
     2701 gaacaacgtg gcgcgcagat gggaaaagcc gttgtcgtcg ttccagcgct cgtcgtggtg
     2761 atagcgccgg tcggctggaa tatgtttttc caggaactct tgcaaatctt ggactagacc
     2821 gggctcatac tcgagagttg tcagcgccgc ggtggagccg ttgacgaaca gcgtcgccgt
     2881 gccgttgcgc atgttcacgg cgcggatttg ctccttcaat ttggcggtga tgtcgacgat
     2941 gtcgcagcag ccggcggtgg attcggtgat ggtcttggtg tgaatcgtga tcacgctagc
     3001 aatcgacccg tggcggctga caagttgaat tgataagccg acaatggagg gggggcatcg
     3061 gtggcagttt gccgtggctg ctgcgatttt ctaacttcat gacacctgct taacgatctc
     3121 ctcggcgcgt ttgagcgcgg cggcgatttt ttccggctcc ttgccgccgg cctgagcgaa
     3181 gtccggccgt ccgccgccac cgccgccgac catgccggcc aattccttaa tgatgttacc
     3241 ggcatggaat tttttggtca aatccttgct caccgaagcg accaggctaa cggttccgtc
     3301 gctggcgctg gccagcacga caatccctga gccgagcttg gccttcaact gatcggcgat
     3361 ttcgcgcaag tgtttgccgt cgacatcgtc gatctgggcg atcagagttt tgttgccgct
     3421 gacggtttgc tgccgggcga gcaattcggg g
//
LOCUS       DATIRS010000246         2259 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1788684, whole genome shotgun sequence.
ACCESSION   DATIRS010000246 DATIRS010000000
VERSION     DATIRS010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2259
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1788684"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1655
                     /locus_tag="VLM90_03100"
     CDS             <1..1655
                     /locus_tag="VLM90_03100"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HSQ11971.1"
                     /translation="AYLDLYPTFASEIGDHRYDDQLEIVISEEHIAAQRRLFQHTLSR
                     LAGIKQEEIDTRERLYLEVLARGLRLGIDGERFKPHLMPVRQLGSLAIEFPLMGSGSG
                     VHPFRTVIDYDNFLKRIEGFEIWVDTAISNMQKGVEQGLVQPRVVIERALPQIQAMIV
                     ADPQSSLFYQPIVRMPGQFSEADRARLTRAYTEAIEQRIVPSYRRLLEYLKDKYLAKT
                     RSTIALSDLPGGNAWYDHLVKTQTTTDLTPDQIFQLGRDEIARINKEMERLRDRHGFA
                     GSLAEFSRHLAASAPRTYASRSDLIQGYEAIRRTVTPQLAKLFGRIPKAPYEIRAIEE
                     FRERAAPSQYWSASPDGSRPGIFYVNAANIEHSPRRVSEPLFLHEAVPGHHFQISLQQ
                     ERDDLPRFQRFADYTAFVEGWALYAESLGLEVGLYREPAQYFSRLSSELFRAVRLVVD
                     VGLHRKNWSREQAIKYLMDTAMSSESGAALEVDRYIAVPAQALGYKIGQLKVSSIRAK
                     AEKTLGSKFDIRAFHDEMLTDGALPLDRLEAKMDRWIEQARR"
     gene            1823..>2259
                     /locus_tag="VLM90_03105"
     CDS             1823..>2259
                     /locus_tag="VLM90_03105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11972.1"
                     /translation="MRAEILTQEDSPTLLTRRRLDSPRVMTGKERRRINPNHGAIKLG
                     ERYLDMAISRFVYPLLGEVWNPYSWLLERRFALAETKLSPAGWPRGLAPLRVLLISDI
                     HAGIFLKPEVLWRLFHALMETKPDLVAVGGDLVTGHTSEATRFL"
BASE COUNT          495 a          698 c          631 g          435 t
ORIGIN      
        1 aagcctatct agacctatat ccgacctttg ccagcgagat cggcgaccac cgttatgacg
       61 accagttgga aatcgtcatc agcgaagaac atatcgccgc gcaacgccgt ctctttcaac
      121 acacgctcag ccgtctcgcc ggtatcaaac aagaagagat agatacccgc gagcggctct
      181 atctcgaagt tctcgcgcgc ggcctgagac ttggcatcga cggagaaaga ttcaagcctc
      241 atctgatgcc cgtgcgccag ctcggcagtc tggccatcga gtttcctttg atgggctccg
      301 gcagcggcgt ccatccgttc cgaacggtaa tcgactacga caatttcttg aaacgcatcg
      361 aaggcttcga aatctgggtc gacaccgcaa tctccaacat gcagaaaggc gtcgagcagg
      421 gcctggtcca accgcgggtg gtcatcgagc gcgcgctgcc gcaaatacaa gcgatgatcg
      481 tcgccgatcc acagtcgagt cttttctatc aacccatcgt ccgtatgcca ggccaattca
      541 gcgaagcgga ccgcgcgcgt ttgacgcgcg cctatacgga agcgatcgag cagcgcatcg
      601 tgccgtccta tcgccgtctg ctggagtatc taaaagacaa atatctcgcc aagacccgga
      661 gcaccatcgc actgtccgat ctacccggcg gcaacgcgtg gtacgatcat ctggtcaaaa
      721 ctcaaaccac caccgacttg acgcccgacc agatctttca gttggggcgg gatgaaatcg
      781 cgcgcatcaa taaagaaatg gagcgcttgc gcgaccggca cggttttgcc gggagcttgg
      841 cggaattttc ccgtcatctc gccgcgagcg cgccgcgcac ctacgccagc cggagcgatc
      901 ttatccaagg ctacgaagcg atccgccgga cggtgacgcc gcagctggca aagctattcg
      961 gtcgcatacc gaaggcgccc tacgagatcc gcgccatcga agaattccgc gagcgcgccg
     1021 cgccatcaca atactggtcg gcttcgccgg atggttcgcg gccgggaatt ttctacgtca
     1081 acgcggcgaa tatcgagcac agtccccggc gcgtctccga gccgctgttt cttcacgaag
     1141 cggtacctgg ccaccacttt cagatttcgc tacagcagga gcgcgacgac ttgccgcgct
     1201 ttcaacgctt cgccgactac accgccttcg tcgaaggctg ggcgctctat gccgagagcc
     1261 tcggtctcga ggtcggcctg tacagggaac cagctcaata tttcagccgg ctgagttcag
     1321 aattgttccg cgccgttcgc ctggtcgtcg acgttggctt gcatcggaag aattggagcc
     1381 gggagcaagc gatcaaatac ctgatggata cggccatgag cagcgaaagc ggggccgctc
     1441 tcgaagtgga ccgctatatc gccgtgccgg cacaagcgct cggatacaaa atcggccagc
     1501 taaaagtgtc ctcgatccgc gccaaagccg aaaaaacgct cggttccaag ttcgacatcc
     1561 gcgcttttca cgacgaaatg ctcacggacg gcgcgctgcc tctcgatcgc ctcgaagcaa
     1621 aaatggatcg ttggatcgaa caagcgcggc gctgagtcga attcacggtc cggcaattga
     1681 cttcgagcaa atcctgtcac cagagcggag tttcgggagc gttggagcca cggctgcggt
     1741 cttgcgcggc gttctaggcc accaaagatg acaggctagg atgaattcaa cgcgccggcg
     1801 cgctagaata tgacaatctg ccatgcgcgc cgagattctc acccaggaag attccccaac
     1861 gcttctcaca agacgacgtc tcgactcgcc acgagtgatg accggcaaag agcggcggcg
     1921 gataaatcca aatcacggcg cgatcaagct cggcgaacgt tatctggata tggcgatctc
     1981 gcgattcgtc taccctttgc tcggcgaagt ttggaatccg tacagttggc tgctcgaacg
     2041 ccgctttgcg ctcgccgaga ccaaactttc ccccgccggc tggccgcgcg gcctggcgcc
     2101 gttgcgcgta ttgttgatca gcgacatcca cgccgggatt tttctaaagc cggaagtgct
     2161 gtggcggctg ttccacgcgt tgatggaaac aaaacctgat ctggtcgccg tcggcggcga
     2221 cttggtcacc ggccacacca gtgaagcgac acgatttct
//
LOCUS       DATIRS010000247         2700 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1788691, whole genome shotgun sequence.
ACCESSION   DATIRS010000247 DATIRS010000000
VERSION     DATIRS010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2700
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1788691"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..440
                     /locus_tag="VLM90_03110"
     CDS             <1..440
                     /locus_tag="VLM90_03110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11973.1"
                     /translation="KTKEWLKCMGQNQIIIQTGHTQRMELMLTGDHAVQGDNYFYTGV
                     EAKRKDPKAPFAMVLTAPILSFAGGMIINKNALNPYASALFVDWTLSTDSQNMINGIL
                     RGPLTIKHPYLPDNVKLVTYNIVSDDITKRLHDAWGQYIGRMK"
     gene            465..2204
                     /locus_tag="VLM90_03115"
     CDS             465..2204
                     /locus_tag="VLM90_03115"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HSQ11974.1"
                     /translation="MNSPRSGAGVRLPLPSGGGIVLIGLSVILLYQVAVPLALIVWTS
                     LKTIRPGESGFLDFSFTLANYSRAYGIGEFWQASVNTLYFALATTVLAFIWGTFLAWT
                     VERTNTPLARLIGLVTLGRIIIPGVIITVSWILMASPSIGILNHIIAALTGVSRFLNI
                     YSFWGMVWVQSLEMTPLAYLLMSAALQSIDPRLEEASAIAGAGTWPTFRRISLPLVLP
                     AAAAAALLLFIQTVESFEVPLLLGGRARVSVYTTQVYFNTSRMPTDWGLSSTYSMMLL
                     LLAMVLLFVYFRLVRHGERYQTITGKDFRPRRVDLGRWKYPACALSLLLVFLITGLPF
                     LTMLYASFLPRFQAPTAEAFQAMTWSNYANLLADDGYALKPLWNSTLLGVGSATAVML
                     LVAGISYFVHKTRVRGRKILDFLGFAPIALPSVVLGSAFMWLYLIIPLPVIGTLSIIG
                     LAYLTRYLPFALRFVSSAMVQIHAELEEAAAVAGGGWWRNFYHIYLPLLRPGLMAGWF
                     WVMVHAYRELTISLMLARSNNRTASVIIFDLWSNGSFQQLSAFGVVMFTLLIVLVVIA
                     QKISRRYGIQEQV"
     gene            complement(2363..>2700)
                     /locus_tag="VLM90_03120"
     CDS             complement(2363..>2700)
                     /locus_tag="VLM90_03120"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HSQ11975.1"
                     /translation="IYPNFMVNVYEGVMDTNLVIQRGVDKTEVIFDYYFADVSELARK
                     KNLASIAVSEQIQAEDVAICQSVQRGLNSRAYNTGRLSVRREAGEHLFHRLLHDDLSA
                     GLRKQHEAE"
BASE COUNT          502 a          783 c          771 g          644 t
ORIGIN      
        1 agaaaaccaa agagtggctc aagtgcatgg ggcagaatca aatcattatc caaaccggcc
       61 acacccaacg catggagctg atgctcaccg gcgaccatgc ggtacagggc gacaattatt
      121 tctacaccgg cgtcgaagcc aagcgcaaag atcccaaggc gccgttcgcg atggtgctga
      181 cggcgccgat cctctcgttt gccggcggca tgatcatcaa caagaatgct ctgaacccct
      241 acgcgtccgc gctctttgtc gattggacgc tgtcgacgga tagtcaaaac atgatcaatg
      301 gaattttgcg cggtccactc acgatcaagc acccgtatct gcccgacaac gtcaagctgg
      361 tgacctataa catcgtcagc gacgatatta ccaagcggtt acatgacgct tggggccaat
      421 atatcggccg catgaaataa gctgccgctc ctcctattat gaccatgaat tcgccgcgct
      481 cgggagccgg cgtccggctg cctttgccca gcggcggcgg catcgtgctg atcggtctca
      541 gcgttatcct gctttaccag gtcgcggtgc cgctggcgct gatcgtttgg accagcctca
      601 aaaccattcg ccccggcgag agcgggtttt tggatttcag ttttactttg gccaattaca
      661 gccgcgccta cggcatcggc gagttttggc aggcgagcgt caacaccctc tacttcgccc
      721 tggcgacgac cgttctggca tttatctggg gaacctttct cgcctggaca gtcgagcgca
      781 ccaacacgcc gctggcgcgg ctgatcggct tggtcacgct cggccggatt attattcccg
      841 gtgtgatcat cacggtgtcg tggattttga tggccagccc gagcatcgga atattgaatc
      901 acatcatcgc tgcgctgacc ggggtaagca gatttctcaa catctattca ttctggggca
      961 tggtctgggt gcagtcgctg gaaatgacgc cgctggctta tttgttgatg tcggcggcat
     1021 tgcaatccat cgacccccgg ctcgaagaag cgtcggcgat cgccggcgcc ggcacttggc
     1081 cgacttttcg ccggatcagc ttgccgctgg tcttgcccgc cgccgcggcg gcggctttac
     1141 tgttgtttat ccaaaccgtg gagagcttcg aggtgccgct cttgcttggc gggcgcgccc
     1201 gggtgtcggt ctacacgacg caagtttact tcaacacctc gcgcatgccg acggactggg
     1261 gattgtcgag cacctattcg atgatgttgc tgctgttggc gatggtgctg ctcttcgtct
     1321 acttcagact cgtgcgccac ggcgagcgtt accagaccat cactggcaag gattttcggc
     1381 cgcgccgcgt tgatcttggc cgctggaaat atccggcttg cgcgctctcc ctgctgctgg
     1441 tttttctcat cacgggcctg ccgtttctca ccatgctcta cgcgtcattc ctgccgcgct
     1501 ttcaagcgcc gactgccgaa gcgttccagg cgatgacatg gtctaactac gccaacctac
     1561 tggctgacga cggctatgcc ttgaaaccgc tgtggaacag cacgctgctc ggcgtcggat
     1621 cggcgaccgc ggtgatgctg ctggtcgccg gcatcagcta tttcgtgcat aagacgcgcg
     1681 tccgcggccg caaaattctc gacttccttg gctttgcgcc gatcgcgctg ccgagcgtcg
     1741 tgctcggctc ggcgttcatg tggctctatc tgatcatccc gctgccggtg attggcacgc
     1801 tgagcattat aggcctggct tatctgacga gatatttacc gttcgcattg cgcttcgttt
     1861 cctccgccat ggtgcaaatc catgccgaac tcgaagaggc ggcggccgtc gccggcggcg
     1921 gctggtggag aaatttttat cacatctatt tgccgctact ccgcccgggg ctcatggcgg
     1981 gatggttttg ggtgatggtt catgcctacc gcgagctgac gatttcactc atgttggcgc
     2041 gttcgaataa tcgcaccgcc tcggtgatca tcttcgacct gtggtcgaac ggttcgtttc
     2101 aacagttgag cgccttcggt gtcgtcatgt tcacgctcct gatcgtgctg gtggtcatcg
     2161 cgcagaagat cagtaggcgg tatggcatac aggagcaggt gtgaaaaatc tgtttgccgc
     2221 tggtcaactc gcaggacggc gcttgggttg atttgcatcg gatcgcaggt tcggttaagg
     2281 agcgcagcga caagcccaat gtcttgagcg tatagatcga aggacgatgg gtatcgcttc
     2341 gctccaccca tcctacgaaa gatcactctg cttcgtgttg ctttcgaagt cctgcggata
     2401 agtcgtcgtg cagcagccgg tgaaacagat gttcgcccgc ctcgcggcga accgagaggc
     2461 gcccggtatt gtaggcgcga gaattcaaac cgcgctgcac cgactggcaa atagccacgt
     2521 cctcggcctg gatttgttcg ctgacggcga tgctcgctag attctttttt cgtgccaatt
     2581 cggaaacgtc ggcgaaatag tagtcgaaaa tgacttcggt cttgtcgacg ccgcgctgga
     2641 tgacgagatt ggtgtccatc acgccttcat acacgttgac catgaaattg ggataaatcc
//
LOCUS       DATIRS010000248         1661 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_707318, whole genome shotgun sequence.
ACCESSION   DATIRS010000248 DATIRS010000000
VERSION     DATIRS010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_707318"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..485
                     /locus_tag="VLM90_03125"
     CDS             <1..485
                     /locus_tag="VLM90_03125"
                     /inference="COORDINATES: protein motif:HMM:NF028178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HSQ11976.1"
                     /translation="NEGVDALIQGRADVTTHAMGSAKLKEADAAVGIRFLSLDCSKLG
                     EERIKKAIPGYYLSTVKGGSSSGILEDVCAYTYDIYLVGHAKLPDAVVRSVLQAIWVN
                     IDKLPQFHPGFVEWTKARAVDAEVTIPYHPAAVRYFKDAGVWPAKMDEAQKKLLAWKP
                     "
     gene            553..1593
                     /locus_tag="VLM90_03130"
     CDS             553..1593
                     /locus_tag="VLM90_03130"
                     /inference="COORDINATES: protein motif:HMM:TIGR02122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HSQ11977.1"
                     /translation="MLIHNVAIRLSVTLSAAVVFSLATANAQKLPPSTTIGTNPAGTV
                     FYAVSAGLAKVISGAGPMQSVVQPYTGSSTFMPLVDSGELDFGIINAVETNLGYQGPA
                     KLKIGGKNPLPHVPNTRLIMRGSPLSVSLVVKKDSPIKTVHDVKGKRVTGEYPANAAI
                     WFHIFAGLASAGLTWDDVKIVPVPAVNDGVDALVQGRADVTNHAIGAAKVKEADATVG
                     VRYLSLDCTPEGDARARKAVPGYAITTLKAGASTGIVADTCVLSYDIYWVGHKGLSNE
                     VVTHALKAVWDNIDKLPPLNPQFQDWTRARAASAEVTVPYHPAAVQFYKEKNLWNAKM
                     DEAQKRLLAVNP"
BASE COUNT          376 a          493 c          475 g          317 t
ORIGIN      
        1 tcaatgaagg cgtcgacgcg ctcattcaag gccgcgccga tgtcacgacc cacgccatgg
       61 gctcggctaa actaaaggaa gctgacgcgg cggtgggaat ccgcttttta tccctcgact
      121 gttccaagct cggcgaagag cggatcaaga aagccatccc gggatattat ttatccaccg
      181 tcaaaggcgg ttcgtcgtct ggaatcctcg aagacgtctg cgcctacacc tacgatattt
      241 atctcgtggg tcatgccaaa cttcccgacg ccgtcgtgcg cagcgtgctg caggcgatct
      301 gggtcaatat cgacaagttg ccgcaatttc acccaggttt tgtcgagtgg accaaagccc
      361 gcgccgtcga tgccgaggtg acgattccct atcatccggc cgcggttcgc tatttcaaag
      421 acgccggtgt ctggccggcc aagatggacg aggcccagaa aaaactcttg gcttggaagc
      481 cgtaaccaaa actatcggac gggtttggag taatggagta ttggagtgct gggttcggac
      541 cggaggaaaa ctatgctaat ccacaacgta gcaattcgat tgtcggtaac gcttagcgcc
      601 gccgtagtgt tttcgttggc aaccgccaac gcacagaaac ttcctccctc gacgaccatc
      661 ggcaccaacc ccgccggcac cgtcttctat gccgtcagcg ccggtttggc gaaagtgatc
      721 agcggcgcag ggccgatgca gtcggtggtg cagccctaca ccggcagcag cactttcatg
      781 cccttggtcg atagcggcga gctcgacttc ggcatcatca atgccgtcga aaccaacctc
      841 ggctaccaag gaccggcaaa actcaagatc ggcggaaaga atccattgcc gcatgtgccc
      901 aacacgagat tgatcatgcg cggctcgccg ttgtcggtca gcctcgtggt caaaaaggac
      961 tcgccgataa aaacggtcca cgacgtcaag ggcaagcgcg taaccgggga atatccggcc
     1021 aatgccgcga tctggttcca catttttgcc gggctcgcca gcgccgggct gacttgggac
     1081 gatgtcaaaa tcgtccccgt cccggccgtc aacgacggcg tcgacgcgct ggtccaaggc
     1141 cgcgccgatg tcaccaacca cgcgatcggc gccgctaagg taaaagaggc tgatgcaacc
     1201 gttggggtcc gttatctatc gctcgattgc acgcccgaag gagacgcgcg cgctagaaaa
     1261 gcggtcccgg gttacgccat caccacgctc aaggctggag cctccaccgg catcgtcgcc
     1321 gacacctgtg tgctctccta cgatatttac tgggtcggtc ataaagggct gtcgaacgaa
     1381 gttgtcaccc atgcgctcaa agcggtttgg gacaacatcg acaagctgcc gccgctcaat
     1441 ccgcagtttc aggactggac ccgcgcccgc gccgcatccg ccgaggtgac cgtgccctat
     1501 catcccgccg ccgtccagtt ctacaaggaa aagaatttgt ggaacgccaa aatggacgag
     1561 gcgcagaaaa gattgctggc ggtgaatcca taggagtgtg cagaagagcg gaatgtcgga
     1621 gtactggagc gatggttcgg acaggagacc agttatgaaa c
//
LOCUS       DATIRS010000249         3860 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_18783, whole genome shotgun sequence.
ACCESSION   DATIRS010000249 DATIRS010000000
VERSION     DATIRS010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3860)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3860)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3860
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18783"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            41..2098
                     /gene="kdpB"
                     /locus_tag="VLM90_03135"
     CDS             41..2098
                     /gene="kdpB"
                     /locus_tag="VLM90_03135"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR01497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031004 - potassium ion-transporting
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HSQ11978.1"
                     /translation="MPDARLKDRSLFDPEIVRPAVWESFLKLAPQHVIKNPVMFVVEI
                     ASVLTTLILLRDLIAPTAGSQPLWFTFNVTFWLWFTVIFANFAEAVAEGRGKAQAATL
                     RKMRQETSARRLINGNREETVPASVLRKGDSVVVEAGEIIPGDGDVIQGIASVDESAI
                     TGESAPVIRESGGDRSAVTGGTKVLSDRIVVRITASPGESFLDRMIALVEGASRQKTP
                     NEIALNILLAGLTIVFLFACVTLVPMALYSGVAVVSVTVIVALLVCLIPTTIGGLLSA
                     IGIAGIDRLLRKNVLAMSGRAVEAAGDVDTLLLDKTGTITLGNRMATEFIPVDGARAE
                     TLADAAQLSSLADETPEGRSIVVLAKEKYGLRGRDVTEIGAHFIPFSAETRMSGCDLN
                     GRKIRKGAVDAIAAYIQEMGGTVGSQVEGITHGISDTGGTPLVVAEGNKILGVIHLKD
                     VVKGGIKERFERFRAMGIRTVMITGDNPRTAAAIAREAGVDDFLAEATPEAKMRLIKE
                     EQAKGKLVAMTGDGTNDAPALAQADVGVAMNTGTQEAKEAGNMVDLDSNPTKLLEVVE
                     IGKQMLMTRGVLTTFSIANDVAKYFAIIPAMFMGVYPEIAPLNIMHLASPQSAILAAV
                     IFNALIIILLIPLALRGVQYRPIGAGPLLARSLLVYGVGGVVAPFIGIKLIDVVLVAV
                     GLV"
     gene            2108..2716
                     /gene="kdpC"
                     /locus_tag="VLM90_03140"
     CDS             2108..2716
                     /gene="kdpC"
                     /locus_tag="VLM90_03140"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: protein motif:HMM:NF001454.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpC"
                     /protein_id="HSQ11979.1"
                     /translation="MKNLFGIAIRTTIVTLVLTGLIYPFVMTGLSQVLFPWRANGSLV
                     TDEKGQVVGSELIGQGFANPAYFQPRPSAAGEKGYDATASSGSNLGPTSKKLQDRIND
                     DLKRLKAETPEATGPVPAELVTASASGLDPHLSPEAMLWQAPRVAKARGVSAERVKAV
                     VDAHVEGRTFGILGEPRVNVLMVNLALDRQFGRPATLPVQEK"
     gene            2750..>3860
                     /locus_tag="VLM90_03145"
     CDS             2750..>3860
                     /locus_tag="VLM90_03145"
                     /inference="COORDINATES: protein motif:HMM:NF014728.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSQ11980.1"
                     /translation="MATEHKRPEDFLELVERAKRGRLKVYIGSAAGVGKTYQMLEEAH
                     ALQKRGVDVVLGFIEPHDRLDTAALIEGLEVVPRQRVEYRGVIVEEMDLDAALNRRPQ
                     VAIVDELAHTNAPFCRNKKRYQDVLELLDAGINVICAFNVQHLESLNDMVKQATGVVV
                     RETVPDSILKRADQVVDIDLAVEDLIDRLKAGKIYAPDKVGWALENFFQPEKLAVLRE
                     IALREVAESVDRAVSAKADNHDAGRRAAASERVMVCLPTRPPPHGVLLLRQGSRLAGR
                     LNTDWFVVHVETKSEAGHRIDATLQRHLLEDEQRARDLGAEVVRLRSEKPVAALLDFA
                     REHGVRHIVVGRSHKSWWRRLLGQSPVFKLVTEAVG"
BASE COUNT          804 a         1040 c         1198 g          818 t
ORIGIN      
        1 gtggaacatt ttctagctca agcaggaaag gtttactgac atgccagatg ctcgcttaaa
       61 agatcgttcg cttttcgatc cagaaattgt tcggccggcg gtgtgggaga gcttccttaa
      121 gctcgccccg cagcacgtga tcaaaaaccc ggtcatgttc gtcgtcgaga tcgccagcgt
      181 gctgacgact ttgattttgc tgcgcgacct gatcgctccg acggctggat ctcagccgct
      241 gtggttcacc ttcaacgtca ctttctggct gtggttcacg gtaatcttcg ccaacttcgc
      301 cgaagcggtt gccgaaggcc gaggtaaggc tcaggctgcg actttgcgca aaatgcgcca
      361 ggaaaccagc gcgcggcgct tgatcaatgg caaccgtgaa gaaaccgtgc ccgcctcggt
      421 gttgcgcaaa ggagatagcg tcgtcgtcga agccggcgag atcattcccg gcgacgggga
      481 cgtgatccag ggtatcgcct cggtcgatga atcggcgatc accggcgagt cggctccggt
      541 cattcgcgag agcggcggcg atcgttcggc tgtcaccggc ggcaccaaag tattgtccga
      601 ccgcatcgtc gtgcgtatca cggcgagccc gggcgaatct tttctcgatc gcatgatcgc
      661 gttggtcgaa ggcgcttcgc ggcaaaaaac cccgaatgaa attgccctga atattttgct
      721 ggctggatta acgatcgttt ttctatttgc ttgcgtgacg ctcgtgccga tggcgcttta
      781 ttcaggcgtt gcggtcgtct ccgtgacagt gatcgtggct ttgctggttt gcttgattcc
      841 gacaacgatc ggcgggctgc tttccgccat cggcatcgcc ggcatcgatc gcttgctgcg
      901 gaaaaatgtt ttggcgatga gcgggcgcgc cgtcgaagcc gcgggcgacg tggacacgtt
      961 gttgttggat aaaaccggga cgatcacctt gggcaatcgc atggcgaccg aattcattcc
     1021 ggtcgacggc gccagggcgg agacgttggc ggatgcggcg cagctttcta gcctggcgga
     1081 cgaaaccccg gaagggcgat cgattgtcgt gctcgccaag gaaaaatacg gtctccgcgg
     1141 tcgcgacgtg accgagatcg gcgcgcattt tattccattt agcgctgaaa cccgaatgag
     1201 cggctgcgat ctcaacggac gcaagatccg caagggggcc gttgatgcga tcgccgccta
     1261 tatccaggaa atgggtggaa cggtgggctc gcaagtcgag ggcattacgc atggaatctc
     1321 ggacaccggt ggcacgccgc tggtggtcgc ggaaggaaat aagattcttg gggtgattca
     1381 tttaaaggac gtggtgaaag gtggcattaa ggaacgcttt gagcgcttcc gcgctatggg
     1441 tattcgtacg gtgatgatca ccggcgataa tccgcgcacc gcggcggcca tcgcccgcga
     1501 agcaggcgtg gacgattttc tggctgaggc gactcccgag gccaagatgc gtttgatcaa
     1561 agaggaacaa gccaaaggaa agcttgtggc aatgaccggc gacggcacca acgatgcgcc
     1621 ggccttggcg caggcggacg tcggtgtggc gatgaacacg ggcactcaag aggcgaaaga
     1681 agccggcaac atggtcgact tggattccaa tccaaccaag ctgctcgaag tggtcgagat
     1741 tggcaaacaa atgctgatga ctcgcggcgt gctgacgact ttttccatcg ccaacgacgt
     1801 ggcgaaatat ttcgcgatta tccccgccat gtttatgggt gtttacccgg agatcgcacc
     1861 cttaaacatc atgcacctgg cgtcgcccca gagcgcgatt ctggcggcgg ttatatttaa
     1921 tgctctaatt atcatcttgc ttatcccgct agctctacgc ggtgtccagt atcgtcccat
     1981 cggcgctggc ccgttgctgg cgcgttcttt gctggtttac ggcgtcggcg gagtcgtcgc
     2041 gccgtttatc gggattaagc taatcgatgt ggtcttagta gctgtcggac tggtctagga
     2101 gaggatcatg aaaaacctat tcggtatcgc gattagaact acgattgtca cactggttct
     2161 aaccggtctt atttatccat ttgtgatgac ggggttgtct caggtccttt tcccttggcg
     2221 cgccaacggc agcttagtga cagacgaaaa agggcaagtc gtgggctccg agttgattgg
     2281 ccagggattt gccaacccgg cctattttca accccggcca tcggcggcgg gggagaaagg
     2341 ctatgatgca actgcgtcgt ccggctccaa tctcggtccg acctcgaaga aactgcagga
     2401 ccgtatcaac gatgacctca aacggctgaa ggcagaaact ccggaagcta ccgggcccgt
     2461 gcccgctgaa ctcgtcactg cctctgccag cgggctcgat ccacatctct cgcctgaagc
     2521 gatgctatgg caggcgccgc gagtggcgaa agcacgcggc gtcagtgcgg agcgggtaaa
     2581 agccgtcgtc gatgcgcatg tggaagggag aaccttcggc atcttaggcg aaccgcgagt
     2641 caatgtgctg atggtcaatc tggcgctcga tcggcagttc ggccgaccgg ctacgctgcc
     2701 ggttcaagag aaataggaaa tagttgacca gttgaatcct gagctatcga tggcaacaga
     2761 acataaacgg cctgaagatt ttctcgagct agtggagcgc gcgaaacgcg gccgtctcaa
     2821 ggtttacatc ggctcggccg cgggcgttgg gaaaacttac cagatgctcg aggaggcgca
     2881 tgctttgcaa aagcgcgggg tggacgtcgt gctggggttc atcgaacccc atgaccggct
     2941 cgataccgcg gcgctaatcg agggactcga agtggtgccg cgccagcggg tagagtatcg
     3001 cggcgtgatt gtcgaagaga tggatctgga cgccgcgcta aaccggcgtc cgcaagtggc
     3061 gatcgttgac gagctggcgc ataccaacgc gccgttttgc cgcaacaaga agcgttatca
     3121 ggacgttttg gaactgctcg acgccggcat caacgtcatt tgcgctttca acgtgcaaca
     3181 tctcgagagt ctaaacgaca tggtgaagca agccactggc gtagtcgtcc gggaaacggt
     3241 tcctgactcg atcctgaagc gggccgacca ggtcgtcgat atcgatctag ccgtcgaaga
     3301 tctcatcgac cgccttaaag cgggtaaaat ctacgcgccg gacaaggtcg gttgggcgtt
     3361 ggaaaacttt tttcagccgg aaaaactcgc ggtgctgcgg gaaatcgccc tgcgcgaagt
     3421 ggcggaaagc gtcgatcgcg cggtttcagc aaaagctgac aaccacgatg ccgggcgcag
     3481 agcagccgcc agcgaacggg tgatggtttg cctacccact cgcccgccgc ctcatggcgt
     3541 cctgttgctc aggcagggat cgcgcttggc cggacgcttg aacacggatt ggtttgtcgt
     3601 tcacgtggaa accaaaagcg aagccggcca ccgcatcgac gcgacgctgc agcgtcatct
     3661 tttggaagac gaacaaaggg ccagagacct gggcgccgaa gtcgtgcggc tgaggtcgga
     3721 aaagccggtg gcagcgcttc tcgattttgc ccgcgagcat ggtgttcgcc acatcgtcgt
     3781 tggccgttcg cacaaatcat ggtggcgtcg tcttttaggt caatcgccgg tgtttaagct
     3841 ggtaaccgaa gctgtcggct
//
LOCUS       DATIRS010000250         3099 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1002754, whole genome shotgun sequence.
ACCESSION   DATIRS010000250 DATIRS010000000
VERSION     DATIRS010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3099
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1002754"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            134..1450
                     /gene="serA"
                     /locus_tag="VLM90_03150"
                     /pseudo
     CDS             134..1450
                     /gene="serA"
                     /locus_tag="VLM90_03150"
                     /inference="COORDINATES: protein motif:HMM:NF014841.4"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004617 - phosphoglycerate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
     gene            1457..1717
                     /locus_tag="VLM90_03155"
     CDS             1457..1717
                     /locus_tag="VLM90_03155"
                     /inference="COORDINATES: protein motif:HMM:NF013962.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HSQ11981.1"
                     /translation="MNDFYLEAVPEGYILVLQNKDVPGVVGIIGTILGKNGINIAGME
                     LGRSEKGGNAISFTHVDDAMSKKALDELRALPQIVSATLVKL"
     gene            1812..>3099
                     /locus_tag="VLM90_03160"
     CDS             1812..>3099
                     /locus_tag="VLM90_03160"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: protein motif:HMM:NF002223.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HSQ11982.1"
                     /translation="MANVAIIGAQWGDEGKGKIVDLFTEDADIIVRFQGGNNAGHTLV
                     VDGAKTVLHLVPSGALHPNKLCVIGNGVVVDPEVLIEEIRELKTQGHLASDEQLRISE
                     QAHVIMPYHKLIDQARERLRGEGMIGTTGRGIGPAYEDKVARVGIRFVDLLEEDTFRE
                     KLERNIEEKNFYLKAILKEKALNFEAIHESYGRYREKLRVYVTNTGLLLDQETRAGKR
                     VLFEGAQGTLLDVDHGTYPYVTSSSTITGGACSGAGVGPQSIQQVIGISKAYTTRVGS
                     GPFPTEIDGPAGETLRREGAEFGATTGRSRRCGWFDAVGVRHAVRMNGMTGIALTKLD
                     VLTGFKKIPICTAYRYEGKIINEFPASAKVMLRAEPIYEEMDGWDQPLDHVRKFADLP
                     PSAQRYVRRIEKIIDTEIMLVSVGPGREQTILLKNPF"
BASE COUNT          723 a          900 c          904 g          572 t
ORIGIN      
        1 catgggcgcc ttcgacgtca ttactgccat cgccgcgctg gaaatggcgc tgcgcaaatt
       61 tggcgcggag atccccttcg gccgaggcgt cgccgcggcg caggaagtgc tgatggaggc
      121 attgacttag gtcatgaaaa tcctcgtcac cgattcgctt gcacccgagg gtttggcggt
      181 attcaaaaac gccgagggat tcgaagtcga cgtcaaactc gggctcaaac ccgacgagtt
      241 aaaaaaaatc tgcgccgatt acgacggttg ggtgattcgc agcggcacga gaatcacctc
      301 cgaattgatt gaagcggcga aaaatctcaa agtcatcggc cgtgccggcg tcggctttga
      361 aaacatcgac gccgatgcgg caacccagcg aggcatcgtc gtcatgaaca cgcctggtgg
      421 caacaacgtc accaccggcg agcacacggt ggctttgatg atggcgctgg cgcgtcacat
      481 cccccaagcg gtctcttcac ttaagaacgg caaatgggag cgcaacaaat tcgtcggcgt
      541 ggagctctgc aacaaaaccc tcggcgtcat cggcctcggc aacgtctgac ggatcgtcgc
      601 cgagcgcgcc gcggggctgc gcatgaaggt aatcggcttc gatccgttca tcgccgccga
      661 gaacattgcc cgcatgggcg tcgaacccgg cactctcgac gagattttcg ccaaatctga
      721 tttcattacc gtccacgtgc cactgacgcc ggacactcaa ggattaatca acaaggccgc
      781 gtttgccaag atgaaaaacg gcgtgcgcat tatcaattgc gcacgcggcg gtatcgtcga
      841 tgaacaggat ctcgtggaag cgatcaaagc cggcaaagtc gccggcgccg cgttggacgt
      901 gtatgtagac gagccgccgc ccgctgatca tccgctcgtc aaattggaac aagtcatcac
      961 cacgccccac ttgggcgcgt ccaccgacga agcgcaattg aatgtcgcca tcgccgtggc
     1021 cgagcagata gtcgattttc tcgccaaggg cgtcgtgcgt tacgcggtta acgtgccgtc
     1081 ggtgagcccg gagctgttgg aagtattgcg cccctacctc acgctgggcg agaaactcgg
     1141 cagtctccac acgcaaatgg ccggctcgct gcccaaggaa gttcaggtcg agtaccgcgg
     1201 cgatgtcacg caatataacg tagcgccgtt gaccctggcg gtgctcaagg ggcttttgac
     1261 tccagtgatg gaatccgtag tgaattacgt taatgcaccg gtgatcgcca gagagcgcgg
     1321 cattcagatc gtcgaatcca agggcgaacg cgccggcgac ttcacaagct cggttacggt
     1381 gaaggcaaga aacggcaaag aatcacttga gatcgaaggc gccatctttg gcagcaagca
     1441 tccgcgcatc gtgcgcgtga atgattttta tctcgaggcg gtccccgagg ggtatattct
     1501 ggtcttgcag aataaggatg tgccgggcgt cgtcggcatc attggcacca ttttggggaa
     1561 aaacggcatc aatatcgccg gcatggagtt gggtcgcagt gagaagggcg gcaacgcgat
     1621 ctccttcacc catgtggacg acgcgatgag caagaaagcg ctcgacgagc tgcgcgccct
     1681 gccgcagatc gtatcggcga ccctggtcaa actgtgaaaa ccaggcaaca ggcaataggc
     1741 aatcgttgta agggacggca tgccgattcc ttactcgtgc ctcacgcctc atgcctcgcg
     1801 cctgagggcc catggcaaat gtagcgatca tcggcgccca atggggcgac gaaggcaagg
     1861 gaaaaatcgt cgacctcttc accgaggatg cggatatcat cgtgcgcttc cagggcggca
     1921 acaacgccgg ccacacactg gtcgttgacg gcgcgaaaac cgttcttcac ttggtgccgt
     1981 ccggcgcttt gcatccgaac aaactctgcg tgatcggtaa cggggtcgtt gtggacccgg
     2041 aagttctcat cgaggaaatc cgagagctta aaacccaagg ccatctcgcc agcgacgaac
     2101 aattacgcat cagcgagcag gcccacgtga tcatgcccta tcacaaattg atcgaccaag
     2161 cgcgcgagcg gttgcgcggc gaaggaatga tcggcaccac cgggcgcggc atcggccctg
     2221 cctacgaaga taaagtggcg cgcgtcggca tacgcttcgt cgatctttta gaagaagaca
     2281 cgttccgcga gaagctcgaa cgaaacatcg aggaaaagaa cttttatcta aaagccatcc
     2341 tcaaggaaaa ggccttaaac ttcgaggcga ttcatgagag ctacggacgc taccgcgaaa
     2401 agctcagagt ttacgttacc aacaccggcc tattgctcga ccaggagaca cgcgccggta
     2461 agcgcgtgct cttcgagggc gcgcagggaa cgctgctcga cgtcgatcac ggaacctatc
     2521 cctacgtcac ttcgtcaagc acaatcaccg gcggggcgtg ctccggcgcc ggcgtcggac
     2581 cgcaaagtat tcaacaggtg atcggcatct cgaaggccta caccacacgg gtcggaagcg
     2641 gcccatttcc caccgagatc gatggcccgg cgggcgaaac gctcaggcgc gaaggcgctg
     2701 aattcggcgc cactacgggc agatcccggc gctgcggttg gttcgacgcc gtcggcgtgc
     2761 gccacgccgt ccgcatgaac ggcatgaccg gcatcgcgct taccaagctc gatgtgctga
     2821 ccgggtttaa gaaaatcccg atttgtacgg cctaccgata tgaaggaaag attatcaatg
     2881 agtttcccgc cagcgccaag gtgatgctgc gcgccgaacc gatttacgag gaaatggacg
     2941 gttgggatca gcccctcgat cacgtacgca agtttgctga tttaccgccg agtgcacaga
     3001 gatatgtgcg ccgcattgaa aagatcatcg acacggaaat tatgctcgtc tcggtaggcc
     3061 ccggccgcga acaaaccatc ctgctcaaaa acccattcg
//
LOCUS       DATIRS010000251         1739 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_117219, whole genome shotgun sequence.
ACCESSION   DATIRS010000251 DATIRS010000000
VERSION     DATIRS010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117219"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..500)
                     /locus_tag="VLM90_03165"
     CDS             complement(<1..500)
                     /locus_tag="VLM90_03165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11983.1"
                     /translation="MSKVKSLLLISWCVLFGGVAHAAESKPAWQIEWEKTVEAAKKEG
                     QVTVYISGYEEVLPEFQKEYPDIKLISVTGRGSQMAQRLLAERRGDKFLADVFNSGGV
                     TTHGQLHKAKVLDPIKPALILPEVIDTSKWYQKTHHYTDPEGQYVFSYVGSATYGSVS
                     YNTKLV"
     gene            complement(582..>1739)
                     /locus_tag="VLM90_03170"
     CDS             complement(582..>1739)
                     /locus_tag="VLM90_03170"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HSQ11984.1"
                     /translation="GLGVASTQILPPLAAMPYIKITAAADTRGDALEKFRETYDGDAF
                     TSVEALCESAKVDAIYIATPNPLHARHVIAAAERGKHVIVEKPMAMTLGECDAMNEAA
                     EKHGVKLLCGHTHSFDPPIRMIREIVKSGDLGRLRMINTWNYNEFMYRPRMKHELAAS
                     RGVVLNQGPHQVDIVRLIGGGLVQSVRAMTGVWDKARGYEGSYTCYLEFQEGTPATLV
                     YSGYGFFDTAELFNWVGEGGQQRDPKTNLNVRKRLREVRAPEEEEALKEAMRFGGRRE
                     GEFSHVWSGERKQPFFGFTLVSCEKGDIRQTPDGLHIYGETEQREITLPAGSRGREAE
                     VEELYNAVVHKWPVFHDGRWGAATLEVCLAMLESAEQRKEIFLSHQVPTPE"
BASE COUNT          310 a          556 c          489 g          384 t
ORIGIN      
        1 tcgacgagtt tggtattgta actcacagag ccgtaggtcg ccgagccgac gtagctaaac
       61 acgtattgcc cttcagggtc cgtgtaatga tgcgtttttt gataccattt cgaggtgtca
      121 atcacctcgg gaaggatcaa agccggcttg atcgggtcca gcaccttggc cttatgcaat
      181 tgcccgtggg tcgtcacgcc gccggaattg aaaacatcgg cgagaaattt atcgccgcgc
      241 cgttcggcca gcaatcgttg cgccatttga gacccgcggc cggtgaccga gatcaattta
      301 atgtcgggat attctttttg aaactccggc agcacttctt catagccgct gatgtagacc
      361 gtgacttgac cctctttctt ggcggcttcg acggtctttt cccattcgat ctgccacgcc
      421 ggcttcgact cggcggcatg cgccacgcca ccgaaaagaa cgcaccacga aatcaacagt
      481 agactcttca ctttagacat ttcaccgcgc ctcccggctg aagactttat gcaatttggt
      541 atttaactca agactctagg cccgcgcctg gcaacgttag ctcattccgg agtcggaacc
      601 tggtgtgaca aaaaaatctc tttgcgctgc tcggccgact cgagcatggc caagcacact
      661 tccaacgtcg ccgcgcccca gcggccgtcg tgaaacaccg gccacttgtg caccaccgcg
      721 ttgtaaagct cttctacttc ggcttcgcgc cctcggctcc ccgcggggag cgtaatctcg
      781 cgctgctcgg tctcgccgta gatatgcaga ccgtccggcg tctggcggat atcacccttc
      841 tcgcagctca ccaaggtgaa gccgaaaaac ggctgcttgc gctcaccgct ccaaacatgg
      901 ctgaactcgc cctcgcgccg cccgccgaag cgcatggctt ccttgagcgc ctcttcctcc
      961 tcgggcgcgc gtacttcgcg caggcgtttt ctgacgttga gattggtctt tggatcgcgc
     1021 tgctggccgc cctcaccgac ccagttgaat agctccgccg tgtcgaaaaa gccgtagccg
     1081 ctgtagacca aggtcgccgg cgtgccttct tggaattcga gatagcaggt gtagctgccc
     1141 tcgtagccgc gcgccttatc ccaaacgccg gtcatggcgc gcacgctctg caccaggccg
     1201 ccgccgatca agcgcacgat atcgacctgg tgcggtccct ggttgagcac tacgccgcgg
     1261 ctcgccgcga gctcgtgctt catgcgcggc cggtacatga actcgttgta gttccaggtg
     1321 ttgatcatgc gcaggcggcc gaggtcgccg ctcttgacga tctcgcggat cattcggatc
     1381 ggcggatcga agctatgggt atggccgcac agaagcttca cgccatgttt ctccgcggct
     1441 tcgttcatgg catcgcactc gcccagggtc atcgccatcg gcttttcgac gatgacatgc
     1501 ttgccgcgtt cggccgccgc gatcacatgc cgggcgtgga gcgggttcgg cgtcgcgatg
     1561 taaatcgcat cgaccttggc gctctcgcac agtgcctcga cgctggtgaa cgcgtcgccg
     1621 tcgtaagtct cgcggaattt ctccagcgca tcgccgcgcg tgtccgccgc ggcagtaatc
     1681 ttgatgtaag gcattgccgc gagcggcggc aggatctgcg tgctggcgac gccgaggcc
//
LOCUS       DATIRS010000252         1634 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1691263, whole genome shotgun sequence.
ACCESSION   DATIRS010000252 DATIRS010000000
VERSION     DATIRS010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1634
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1691263"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(141..>1634)
                     /locus_tag="VLM90_03175"
     CDS             complement(141..>1634)
                     /locus_tag="VLM90_03175"
                     /inference="COORDINATES: protein motif:HMM:NF013086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HSQ11985.1"
                     /translation="DLTDWSIVQPNGTPDFRYNDRAVMRAFADHCATAFEFLLANGVE
                     FADKAPDNQGASTTGNSAPRENHAIWSKGAGLESPNAANGTSVIRPLEASARAKGVKF
                     LLNYKMTSLIREPSSGENPGHVIGIDAQYNPHIMPGATAPLKSFRSEGNIDSSKPTMK
                     LKAHKAVIVATGGSTSDVNFRRMFDPRLTPEFQVGGEPYSYQDASGELAAMAVGAALW
                     GLVHQALENGATMRSQRALATKYNYTTWKLESPIFPLVKSTGFNVKDWQDLILVNQVG
                     QRFYDETKGDPPHGNHGLQYPDCTPNDYRNAENVKYNPTRYNFVNAALAMNAYSEPPD
                     YCPGPQWAIFDADAVEREGWKVVPPYVDPDGYFFSGNTLGELAAAIKNEYQAKPMRGE
                     VLQATVERYNSFVDAGVDADFGKPAPKYKIQKPPFYAAWGTVIVHDTRAGLRINARCQ
                     VVDMSGQVIPGLYCAGESAGGFNQHGMGRCVTQGYICGVDVAKLPRR"
BASE COUNT          307 a          490 c          472 g          365 t
ORIGIN      
        1 acatttgtct tcctttcgac tatcgacatc tttgccgaac gtgttcactt cgcaactaaa
       61 tcgtgaatcg taaggggtaa agggtgaggc gtgaggcgtc cggaacccct cacccctgac
      121 gcctaacccc taacgatttt ctatcgtcgc ggcagcttcg ccacatccac cccacaaata
      181 taaccctggg tgacgcagcg gcccatgcca tgctgattga aaccgccggc cgattcaccg
      241 gcgcagtaaa gtccgggaat cacttgcccg ctcatgtcga ccacttggca gcgcgcgttg
      301 atgcgcaaac cggcgcgggt atcatggacg atcaccgtac cccaggcggc gtagaacggc
      361 ggcttttgga ttttgtattt gggcgcgggc ttgccgaagt cggcatcgac acccgcgtcg
      421 acgaaagagt tgtaacgctc gacggtcgct tgcaaaactt cccccctcat cggcttggct
      481 tgatattcat tcttgatcgc ggcagcgagt tcaccgaggg tgttaccgga gaaaaaataa
      541 ccatcggggt cgacgtaggg cggcaccacc ttccagcctt cgcgctccac cgcatcggcg
      601 tcgaagatcg cccactgcgg ccccggacag taatccggcg gctcggagta tgcgttcatt
      661 gccaatgcgg cgttgacgaa attgtatcgg gttggattgt acttgacgtt ttccgcgttg
      721 cgataatcgt tcggcgtgca atccgggtat tgcagtccat ggttgccgtg cggcggatcg
      781 cccttggtct cgtcgtagaa ccgctggccg acttggttga cgagaatcaa atcctgccag
      841 tctttgacgt tgaaacccgt tgacttcacc aacgggaaga ttggactctc aagtttccag
      901 gtcgtgtagt tatatttggt cgccagggcg cgctgggagc gcatggtcgc gccgttctcc
      961 aacgcctggt gcaccaaccc ccacagcgca gcgccgacag ccatggcggc gagttctccg
     1021 ctggcgtctt gataactgta cggctcgccg ccaacctgaa actccggcgt caagcgcgga
     1081 tcgaacatgc ggcggaaatt tacgtcgctg gtgctgccgc cggtggcgac gatgacggcc
     1141 ttgtgcgcct tcaatttcat cgtcggtttg ctgctgtcga tattgccttc agagcgaaaa
     1201 ctctttagcg gcgcggtcgc acccggcatg atatgcgggt tgtactgcgc gtcgatgccg
     1261 atcacgtggc cgggattttc ccctgacgac ggctcgcgaa tcaggctggt cattttgtaa
     1321 ttgagcaaaa acttgacgcc cttggcccgc gcgctcgcct ccaacggccg gatcacgctg
     1381 gtgccgttgg cagcattggg gctctccagc cccgcgcctt tgctccaaat cgcatgattt
     1441 tcccgcggcg ccgagttgcc cgtggttgac gcgccttgat tgtccggcgc cttatcggcg
     1501 aactcgacgc cattagccag taaaaactcg aatgccgtgg cacagtgatc ggcgaaggcg
     1561 cgcatcaccg cccggtcgtt gtagcgaaag tccggcgtgc cattgggttg aacgatagac
     1621 caatcggtga ggtc
//
LOCUS       DATIRS010000253         2358 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_19447, whole genome shotgun sequence.
ACCESSION   DATIRS010000253 DATIRS010000000
VERSION     DATIRS010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2358
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19447"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(172..987)
                     /locus_tag="VLM90_03180"
     CDS             complement(172..987)
                     /locus_tag="VLM90_03180"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSQ11986.1"
                     /translation="MIKRPLGAAGAAIIVLMALAALFANFLAPFDPLENDYGAMFQAP
                     GAAHWLGTDSFGRDVLSRLLYGSRTALWVGFCSSFVGTTLGAVFGVSCAYFGGRVDLF
                     MQRFMDILLSFPLIVLALTVVAVLGSGLWNVILAISIPMIPRAALVVRSSALALRQML
                     FVEAALTLGSSHARIIFRHMLPNVMAPYLIMLSAFLGQAILLEASLSFLGLGVAEPTP
                     AWGLMLRGAAVEFAERAQWMALFPGLAISLAVFAFNIFGDSLRDALDPKLRLP"
     gene            complement(1070..2023)
                     /locus_tag="VLM90_03185"
     CDS             complement(1070..2023)
                     /locus_tag="VLM90_03185"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSQ11987.1"
                     /translation="MHRYIIKRLLLMIPTLFGVAVLVFLLLRVAPGDIVELKYAGSGT
                     FAPREAIERERAQLGLDKPLFQQFIVWTWGILRFDFGNSMWTGRPIADEVKIRLELSL
                     QLAVMATLVAILIAVPFGTLAALKQDTWIDYLVRIFSIGGLAMPSFWLGIVIILTFLI
                     VFRWLPPLTFTSFRTDPRANLTQLIWPALAVGYRYSAMATRMTRSTVLEVLREDYVRT
                     ARAKGLLERTVVVKHALRNALLPIVTVIGLEFAFLIGGLVVTEQVFNLNGIGMLFVES
                     ITRRDYTMTQSLVLLVSFAFIFINFLIDLLYAWLDPRIRYQ"
BASE COUNT          616 a          712 c          652 g          378 t
ORIGIN      
        1 actacgaact gcgcggcaag agaaacatgg tcgatctctg gaaccaccgg gcctaaccca
       61 actcccgctt tacgcgctct tatttcccct gcattcatca tttaccaaat agcgagtaag
      121 ttctaagggc gtcgcgctgg aacattcacg gcagcccgcg cagccgagga actacggcaa
      181 gcgcagcttc ggatcgagcg cgtcgcgcag cgaatcgccg aaaatattga acgcgaagac
      241 cgccaggctg atcgccaggc cgggaaacag cgccatccat tgcgcccgct cggcgaactc
      301 caccgccgca ccgcgcagca tcagacccca ggccggtgtc ggctcggcga cgcccaaacc
      361 gagaaacgac agcgacgcct ccagcagaat cgcctgaccg agaaaggcgc ttaacatgat
      421 gagatacggc gccatcacgt tgggcagcat gtggcggaaa ataatccgcg cgtgactcga
      481 accaagcgtc agtgccgctt cgacaaatag catctggcgc agggccaggg cgctgctacg
      541 caccaccagc gcggcgcgcg ggatcatcgg aatcgagatc gccaatatca cgttccataa
      601 gccggagccc agaacggcca cgaccgtgag cgcaagaacg atcagcggaa aggataaaag
      661 aatgtccatg aaacgctgca tgaatagatc gacgcgaccg ccgaagtaag cgcagctcac
      721 tccgaacacc gcgcccaacg tcgtgccgac aaacgacgag cagaacccaa cccacagcgc
      781 cgtgcgcgag ccgtacagca ggcgcgacag cacgtcgcgc ccgaaggagt cggtgccgag
      841 ccaatgcgct gcgccaggcg cttggaacat ggcaccgtag tcgttctcca gcggatcgaa
      901 aggcgccagg aaattggcga acagcgcggc gagcgccatg agaacgatga tcgccgcccc
      961 cgccgcgccg agtggccgtt tgatcacgaa atttcgcgcg acgatccaaa gtccagagtc
     1021 gaaaaacatt gctttggttt atccgaacaa agtgctccgg tcgaaagaac tactggtaac
     1081 gaatgcgcgg atcgagccac gcgtatagta aatcgatcag aaagtttatg aagatgaagg
     1141 caaacgagac aagtaagacc agtgactggg tcatggtgta gtcgcgccgt gtgatcgact
     1201 cgacgaacag cataccaatg ccgttcaagt taaacacctg ctcggtcacc accagaccgc
     1261 cgatgagaaa ggcaaactcg agaccgatca cggtgacgat cggcaaaagc gcattgcgta
     1321 gcgcgtgctt gaccaccacg gtgcgctcca aaagcccttt ggcgcgcgcg gtgcgcacgt
     1381 aatcctcgcg cagcacttcc aagaccgttg agcgggtcat gcgcgtcgcc atggcggaat
     1441 aacgatatcc caccgccagc gccggccaga tgagttgcgt cagattggcg cgcggatcgg
     1501 tcctgaagga tgtgaaagtc agcggcggca gccatctaaa aacaattagg aacgtaagaa
     1561 tgatcacgat gccgagccag aacgacggca tcgccagacc gccgatggaa aaaatccgca
     1621 cgagatagtc gatccaggtg tcctgcttga gcgccgccag tgtgccgaag ggcacggcga
     1681 tcaagatcgc caccaaggtc gccatgacgg ccaactgtaa gctgagctcg aggcgaattt
     1741 taacttcatc ggcgatcggc cgccccgtcc acatcgagtt gccgaaatcg aagcgcagga
     1801 ttccccaggt ccaaacaata aactgttgaa aaagcggttt atccagcccc agttgcgccc
     1861 gctcgcgctc gatcgcttcc ctgggagcga aagtgccgct accagcatac ttgagctcga
     1921 cgatgtctcc cggcgccaca cgcagtaaaa gaaacaccag caccgccacg ccaaacaaag
     1981 tcgggatcat cagcaagaga cgtttaataa tataccgatg catcgtccga ttgaatttaa
     2041 ctcttgcagg tttgccgcga aacaataatt gccacagaga cctagcgcgg caaatccgca
     2101 accaaggggc atttcaccag agaggcccag agttcacatg gttcgaccgt tcgagaagcc
     2161 acacggcagg cttcctcgac ggccttcagt tccgagcccg tcgaggaatc accacgagcg
     2221 aaattctttt taacggcgca tcctgagctt gatcgaagga cgcgtcttcg gcgtctctgc
     2281 ggtgactcat ccaaaaattt gcccagactg agcaagttat tacggatagc caagagcgca
     2341 aagtcttccc agaggcgg
//
LOCUS       DATIRS010000254         1517 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1101493, whole genome shotgun sequence.
ACCESSION   DATIRS010000254 DATIRS010000000
VERSION     DATIRS010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1517
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1101493"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            166..1407
                     /locus_tag="VLM90_03190"
     CDS             166..1407
                     /locus_tag="VLM90_03190"
                     /inference="COORDINATES: protein motif:HMM:TIGR00200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HSQ11988.1"
                     /translation="MIEKAVILSTGDELTTGKVVDTNSAVIADRLFALGIRVAAVVKV
                     GDDRDQMLWALRQAQELGDIVIGTGGLGPTADDLTTELVAELLGVRTKQDDGVAAALT
                     ARFAKRGVAFTANNLKQAIFPEGAVIIANPNGSAPGFRVDLGQGKTLLWLSGVPHEMS
                     AMLRESVLPWIVERNGGQSTIHEATFKIHGISESKLDDLVKPLDLGNFAKLSFRAHFP
                     DLTLRLIVSGCADQTEHFLKLCGQIKNILDDYIYADSELTMEEVVGQLLLRKQQTLAL
                     AESCTGGLISHRITRVAGSSAYFLGAAITYSNAEKIRALGVNPATLDRVGAVSRDTAL
                     EMAQGIRQRTGATIGLSVTGVAGPSGGSADKPVGTVWVSICRDDFHQARLLNLMVLTD
                     RHRIVQGTAQAALNWLRQLLS"
BASE COUNT          308 a          448 c          443 g          318 t
ORIGIN      
        1 gttgctgctg ggtttcctgc tgtttcgcat tttcgatatc gctaaaattt acccagcggc
       61 gcggctggaa aaactccctg gcggcaccgg catcgtcctc gacgacgtgc tggcgggagt
      121 gtatgcattt gtcatcgtcc aaaccttcct atattggcgg tggttatgat cgaaaaagcg
      181 gttatcttga gtaccggcga tgagctgacc accggtaaag tggtcgacac taactcagcc
      241 gtcatcgccg atcggctgtt cgctttaggc attcgtgtcg ccgcggtggt gaaagtcggc
      301 gacgaccgcg accagatgct ctgggccctg cgccaagcgc aggagctcgg cgatatcgtc
      361 atcggcaccg gcggcttggg gccgacggca gatgatttga caacagaatt ggtcgctgag
      421 ttgctcggcg ttaggaccaa acaagacgac ggcgtggcgg cggcgcttac ggcgcgattc
      481 gccaagcgcg gcgtggcgtt taccgcgaac aatctcaagc aggcgatctt cccagagggt
      541 gcggtaatca tcgccaatcc caacggctcg gcgcccggtt ttcgcgtcga cctcggtcaa
      601 ggcaaaacac tcctctggct atccggcgtg ccccacgaga tgagtgctat gctacgcgag
      661 tcggtgctgc catggattgt cgaacggaac ggcggtcagt cgacgatcca cgaggctacc
      721 ttcaaaattc atggcattag cgaatcgaaa ttggacgatc tggttaagcc gctggatttg
      781 ggcaacttcg ccaaactgtc ctttcgcgcc catttccccg atttgaccct gcgtctgatc
      841 gtgagtggct gtgcggacca gacggagcat ttcttaaagc tatgcgggca aatcaaaaac
      901 attctcgacg actacattta tgccgacagc gagctgacca tggaagaagt ggtcggccag
      961 ctgctgctgc gcaagcaaca gactctcgcc ctcgccgagt cttgcaccgg cggattgatc
     1021 agccatcgaa tcacccgagt agccggcagc tctgcctact ttctcggcgc ggcaataact
     1081 tattccaatg ccgagaagat tcgcgccctg ggcgtcaatc cggcaacatt ggatcgtgtc
     1141 ggcgcggtca gtcgagacac cgcgttggaa atggcgcagg gtatccgtca gcgcaccggc
     1201 gccaccatcg gactcagcgt aactggggtg gccggcccat cgggcggcag tgcggacaag
     1261 ccggtcggca ccgtctgggt tagcatctgc cgcgacgact ttcaccaagc cagactcctc
     1321 aatctcatgg tcctgaccga tcgtcatcgg atcgtgcaag gcaccgccca agcggcgttg
     1381 aactggctgc gccaattgct ttcgtgagta gcgggtcatg atccgcgcat ttatcgcctt
     1441 ggaagtcgcg ccgacgacaa tcgccagcat cacctcggca atcgccgagt tgaaacccaa
     1501 actgccggct atccgtt
//
LOCUS       DATIRS010000255         3300 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_806180, whole genome shotgun sequence.
ACCESSION   DATIRS010000255 DATIRS010000000
VERSION     DATIRS010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3300
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_806180"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..294)
                     /locus_tag="VLM90_03195"
     CDS             complement(<1..294)
                     /locus_tag="VLM90_03195"
                     /inference="COORDINATES: protein motif:HMM:NF024759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HSQ11989.1"
                     /translation="MEDIRALCDVVRQTAYAIHKYHGNGHLEKVYENALVHRLRRLEF
                     DVAQQHPLSVVDEDGTILGDYFADLLINRVLIVELKVARAIASEHEAQVLAYLR"
     gene            complement(337..1104)
                     /gene="xth"
                     /locus_tag="VLM90_03200"
     CDS             complement(337..1104)
                     /gene="xth"
                     /locus_tag="VLM90_03200"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008311 - double-stranded DNA 3'-5' DNA
                     exonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HSQ11990.1"
                     /translation="MKLATWNVNSLKVRLPHVLEFLDRHKPDALCLQELKLEDANFPL
                     AVINAAGYQAVYSGQKTYNGVAILSPMAAADVSAGIPGLDDPQKRVLAATVNGVRVIC
                     VYIPNGEAVESDKYKYKLGWLQALTMWLKQELAAYPKLALLGDYNVAPEDRDVYDPKA
                     WAGKVLFSDPEKAAFKDIVTLGLIDSFRMFDQADKSYSWWDYRMNGFKRNLGLRIDHI
                     LLSAELAKTCKSCSIDLDFRAKERPSDHAPVIAEIEI"
     gene            complement(1120..1287)
                     /locus_tag="VLM90_03205"
     CDS             complement(1120..1287)
                     /locus_tag="VLM90_03205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11991.1"
                     /translation="MGLSPDSLRIDIAKDEVDPNSRRLDGVKYLDTDQWLAMKPVLKV
                     VDDALAAAGKK"
     gene            complement(1522..>3300)
                     /locus_tag="VLM90_03210"
     CDS             complement(1522..>3300)
                     /locus_tag="VLM90_03210"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ11992.1"
                     /translation="FVHTPQAIRFVWRSNHWGILGLAVLTLAGALLPAAQAWVGKLIV
                     DGVVAAIQHGQEHEQAKTVFYYLVVELVLILFSTGVIQARRLLQQLTQLKLANQIRGE
                     IIGKALTLDLAFFEHPEYYDKLQNARREGGYKPVELINDTFQIVQNAITLASFAVLLL
                     RFSPWLVAILVLTSIPAFIAETRFSGQGFRLLTRRAPESRQINYLSRLLTEDSSAKEI
                     KLFNLGGTLLTRYMTLFEKFFREDKALACRRAITGFSLGLVATLGFYGSYAWIVWHTV
                     QNKISLGDMTLYLAIFRQGQTTFQSILYAVSSIYENNLFMSNFFEFLGMTPQLAIAAQ
                     PKVLPATLRGGIEFRDVGFRYPDNDQWALRGVNLIIRPGEKIALVGHNGAGKTTLIKL
                     LSRLYDPTEGSILIDGIDLREVDPLALRQKIGVIFQDFVRYHVPVKENIGFGQIDAMA
                     DLDRIIESARKSGADTIIDGLPENYDTMLGRWFHGGHELSLGQWQKIALARAFMRDAE
                     ILVLDEPTASVDAQSEYEIFRHFQELTAGKMAILISHRFSTVRMADRIAVIEGGAISE
                     IGSHQELVDRKGTYAHLFSLQAEGYR"
BASE COUNT          710 a          971 c          916 g          703 t
ORIGIN      
        1 gcgtaaatac gccaggactt gcgcttcgtg ttccgaggcg attgctcgcg ccactttcag
       61 ctcaacgatc agcactctgt taataagtaa atcagcaaaa taatcaccca agatagtccc
      121 atcttcgtcg acaaccgaca gaggatgctg ttgagccaca tcgaattcca gccgccgaag
      181 gcgatggacc aaagcgttct cataaacctt ctccagatga ccattgccgt gatatttgtg
      241 gatggcgtac gcggtctggc gcacaacgtc acaaagtgct ctgatatctt ccatgaattg
      301 attttgtgcc ctttgtgccc tttgtggtta aaattcctaa atctcgatct ccgcgatcac
      361 cggcgcgtgg tcggatgggc gctctttggc gcggaaatca aggtcgatgc tgcagctctt
      421 gcacgtcttc gccagttccg ctgagagcag gatatgatcg atgcgcaggc ctaggttgcg
      481 cttgaagccg ttcatgcggt agtcccacca gctgtaggac ttgtcggctt gatcgaacat
      541 gcggaaacta tcaatcagcc ccagggtgac aatgtctttg aacgcggctt tttccgggtc
      601 gctaaacagc accttgccgg cccaagcctt gggatcgtaa acatcgcggt cctccggtgc
      661 gacattgtaa tcgcccaaca gcgcgagttt gggataggcc gccaattcct gtttcaacca
      721 catggtcagc gcctgcagcc agccgagttt atatttgtat ttgtcagatt cgaccgcctc
      781 gccgttgggg atgtacacgc agatcacccg cacgccgttc accgtcgctg cgagcacgcg
      841 cttttgcgga tcgtccaggc ccgggatacc cgcgctcacg tcagccgcag ccatcggtga
      901 cagtatcgcc acgccgttgt aggtcttctg gccggagtac accgcctgat aacccgccgc
      961 gttaataacc gccagcggaa aatttgcatc ttcaagcttg agttcctgca agcacagcgc
     1021 atcgggcttg tgccgatcga ggaactccaa tacatggggc agacgcactt taagggaatt
     1081 gacgttccag gttgccagtt tcatatttct cctctggagc tatttttttc ccgccgccgc
     1141 caaggcgtcg tcgacgactt tgagcaccgg cttcatcgcc agccattgat cggtgtctag
     1201 atatttcacg ccgtcgaggc gccggctatt gggatcgacc tcgtccttcg ctatatcgat
     1261 gcgcagtgaa tccggtgata agcccatgcc tatgcagccg catgttaaag cgactcaaca
     1321 atcgcatatc gacggcgaac agcacaagaa tcagtccaag gacaaggcgc gcctcgccct
     1381 ttgggcaaat ttctcgatgc gcaaaagcca agagggcggg tttcacaccc gccccgatac
     1441 ttttttgcgc cctttgcgtt ctttgcggcc attcttcttt tcagttgcgg ctctgccgcg
     1501 ctaacagcgt gagagacgac gctagcgata gccttccgcc tgcaggctga acaagtgggc
     1561 gtaggtgcct ttgcgatcga ccagctcttg atggctgccg atctcgctaa tcgcgccgcc
     1621 ttcgatgacc gcgatgcgat cggccatgcg caccgtcgaa aagcgatggg agatcaggat
     1681 cgccatcttc cccgccgtca actcctgaaa gtggcgaaag atctcgtact cggattgggc
     1741 gtccaccgac gccgtcggtt cgtcgagcac gagaatctcg gcgtcgcgca tgaatgcccg
     1801 cgccaaagcg atcttttgcc actggcccaa ggaaagctcg tggccgccgt gaaaccagcg
     1861 gccgagcatg gtgtcataat tttccggcaa cccgtcgatg atggtatcgg cgccgctctt
     1921 gcgtgccgac tcgataatcc gatcgagatc cgccatcgcg tcgatctggc cgaagccgat
     1981 gttttccttc accggcacat gatagcgcac gaagtcctgg aagatcacgc cgattttctg
     2041 gcgcagggcg agcggatcga cttcgcgcag atcgatgccg tcgatcagga tcgaaccctc
     2101 ggtgggatcg tagagccggc tcaagagctt gatcagggtc gtcttgccgg cgccgttgtg
     2161 gccgaccagg gcgatcttct cgcctggccg gattatcaga ttgacgcccc gcagcgccca
     2221 ttggtcattg tccggataac gaaaaccgac atcgcgaaac tcgatgccgc cgcgcagcgt
     2281 cgccggcaat actttaggct gggcggcgat ggccaattgc ggcgtcatgc cgagaaactc
     2341 gaaaaagttc gacatgaaca gattgttctc gtaaatactg ctgacagcgt agagaatcga
     2401 ttgaaaagtc gtctggccct ggcgaaagat cgccaggtag agcgtcatat cgccgagcga
     2461 aatcttattc tgcaccgtgt gccagacgat ccaggcgtag gagccgtaaa agcccagggt
     2521 cgccaccaag ccgaggctga atccggtgat ggcgcgccgg caagcgagcg ccttatcctc
     2581 gcgaaaaaac ttctcgaaca gggtcatata gcgggtcagc aacgtgccac ccaaattgaa
     2641 aagcttgatc tccttggccg aagagtcttc ggtcaacagc ctggacagat agttgatctg
     2701 ccggctctcg ggtgcgcgcc gggtcaacag gcgaaagcct tggcccgaga agcgcgtctc
     2761 ggcgatgaac gccgggatgc tggtcaaaac cagaatcgct accagccaag ggctgaaacg
     2821 caacagcaat accgcgaagg acgccagggt gatggcattt tggacgatct gaaaggtatc
     2881 gttgatcagc tccaccggtt tgtaaccgcc ctcgcgccgg gcgttttgca gtttgtcgta
     2941 atactccggg tgctcgaaaa acgccaagtc cagggtcagc gccttgccga tgatttcacc
     3001 gcggatctgg ttggcgagct tgagttgggt gagctgctga agcagccggc gcgcctggat
     3061 caccccggtg ctgaacagga tcagtacgag ttcaacgacc agatagtaaa aaaccgtttt
     3121 cgcctgttca tgctcctggc catgctggat cgccgccacc acaccgtcga cgatcagctt
     3181 gccgacccaa gcctgcgccg ccggcaacaa cgcgccggcc agcgtgagca cagccagacc
     3241 gaggatgccc caatgattgc tgcgccaaac aaagcgaatc gcttgcggcg tgtgcacgaa
//
LOCUS       DATIRS010000256         2344 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_216517, whole genome shotgun sequence.
ACCESSION   DATIRS010000256 DATIRS010000000
VERSION     DATIRS010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2344
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_216517"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            295..2007
                     /locus_tag="VLM90_03215"
     CDS             295..2007
                     /locus_tag="VLM90_03215"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HSQ11993.1"
                     /translation="MFTTRWATSERKYDVIVERDVKVPMPDGTLLDGDIYRPASDEKF
                     PVLLGAHGYNKDLQSPPMRPVGFTPMRGYMESGDSTFFARRDYVHAVVNSRGTGKSTG
                     FYQLMGPLEVEDGGRLIDWLSAQPWSNGAVGMFGVSYYARLAKAVAATGPKSLKAIFS
                     PFAGTDDYRHRCYHGGILAHGFITHWRNSLHKPNYRSLYKERHGEVAYQEAIAQALRD
                     DEIVAVPALREALQNPGAGTNALIVDMLLHPFDGPFWRERSANDSNGKIPAYLGACWG
                     NYGLHLPGAFTAWREWQGPKKMVIGPPVYLDRPVYQYQDEALRWFDHWLKGIDNGIMN
                     EPPIRCFIPPTGEWKNLSDWPPAEARWTTFYLHKDGILSEHELWPAEGSDSFDESNFE
                     HGAVTYTTPPLVENTEVLGPSVVTLYVSVTDGDALLFATLLLIDKEGKEHELTRGWLR
                     ASQRRLRADSQPWEPMQAHESREALEPGKIYQLQFTIVATARLFQAGERIALRIKGSD
                     DEPAVNSLQALARNHLRRPRPLRITVHHDESHPSHLDLPITRGNIIGTFFSGGDISSF
                     GLSH"
     gene            complement(2143..>2344)
                     /locus_tag="VLM90_03220"
     CDS             complement(2143..>2344)
                     /locus_tag="VLM90_03220"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ11994.1"
                     /translation="FDTLVYDVETLGFLRNKVGAERLLLGTDFPYELGDWRCVDKVER
                     LPCSETDKQSILEGNARKLLKL"
BASE COUNT          473 a          685 c          699 g          487 t
ORIGIN      
        1 aagtgatgct cggcgagcca gacggattca aaaccgattt tttcgccgta ggcgatttgc
       61 tcgacgaccg tgcgaaagcg ttcggcgcct tcggaccgcg ttgccggaag cgacgacggt
      121 aaatagaaga gtccgtaacc catggccgga ccatatgcca gcgcggcgga tttgacaagt
      181 ttttccgagc gcgacgtgag cgcacacctt gccggcaagc tttccctcga ctttcgcatc
      241 ctcgtgggat aatggggttg tcgaaactca tttggcgaaa gaagaattgc gcttatgttt
      301 acgacccggt gggcgacttc ggaacgaaag tacgatgtca tcgtcgaacg cgacgttaaa
      361 gtccccatgc ccgatggcac attgctcgac ggcgatattt accgcccggc gtcggatgag
      421 aaatttcctg ttcttctcgg cgcgcacggc tataacaagg atcttcagtc tccgccaatg
      481 cgtccggtgg gtttcacgcc gatgcgcggt tacatggaaa gcggcgattc gacttttttc
      541 gcccgccgcg attacgttca tgcggttgtc aactcccgcg gcacgggcaa gtccacgggt
      601 ttctaccagc tcatgggacc attggaagtc gaggatggcg gccgtctcat cgactggttg
      661 tcggcgcaac cgtggagcaa cggcgcggtt ggcatgttcg gcgtgtccta ctatgcgcgc
      721 ctggccaaag cggtggccgc cacgggaccg aaatcgctaa aggcgatttt ctcgccattc
      781 gccggcaccg acgattatcg ccatcgctgt taccacggcg ggattctcgc ccatggcttc
      841 ataacgcatt ggcgcaacag cttgcacaag cccaactatc ggagcctcta taaagagcgg
      901 catggcgaag ttgcgtacca ggaagccatc gctcaggcgc tgcgcgatga tgaaattgtc
      961 gcggtgccgg cactgcgcga ggcgctgcaa aatcccggcg cgggcaccaa tgcgctgatc
     1021 gtcgacatgc tgctgcatcc cttcgacggc cccttctggc gcgagcgcag cgctaacgat
     1081 tccaatggaa aaattcccgc gtacctgggc gcctgctggg gcaactacgg actgcatttg
     1141 ccgggcgctt tcacggcgtg gcgggaatgg caaggtccga agaagatggt catcggtccg
     1201 ccggtctatc tcgaccgtcc ggtgtatcag tatcaagatg aggcgctgcg ctggttcgat
     1261 cactggctca agggcatcga caatggcatc atgaatgagc cgccgatccg ctgcttcatt
     1321 ccgcccaccg gcgagtggaa aaatctaagt gattggccgc ccgccgaagc gcgctggacg
     1381 accttctatc tgcataaaga cggcatcttg agcgagcacg agctgtggcc cgctgaagga
     1441 tccgattctt tcgacgaatc gaacttcgag catggcgctg tcacctacac aacgccgccg
     1501 ctggtggaaa ataccgaagt gctcggtccg agcgtggtga cgctgtacgt ttccgttacc
     1561 gatggcgatg cgctgttgtt cgcgacgctg ctcttgatcg acaaggaagg caaggagcat
     1621 gagctcacgc gcggttggct gcgcgcgtcg caacggcgat tgcgcgcgga cagtcaaccg
     1681 tgggagccga tgcaggcgca tgaatcgagg gaggcgctgg agccggggaa aatctaccag
     1741 ttgcaattca ccatcgtcgc cacggcgcgt ttgttccagg ccggcgagcg catcgcgctg
     1801 cgcatcaagg gctcggatga cgagccggcg gtaaactcgt tgcaagcgct ggcgcgcaat
     1861 catttacgcc ggccgcggcc gctgcgcatc acggtgcacc acgacgagtc gcacccgtcg
     1921 catctcgatc tgccgatcac acgcggcaat atcattggaa cgtttttctc gggcggagac
     1981 atcagctcct ttgggctgtc gcactgacct gggcgcgtat gaggaatcct gattgcgatt
     2041 cagtgcgagg gatttcaacc aaccccgggc ggggcgctaa gccttcaaaa tcttctccgt
     2101 gctctcggcg tgcagcgctt gccatcgcag aattcaactc gctcagagct tgagcagctt
     2161 cctggcattg ccctcgagaa tcgattgctt gtctgtttca ctgcaaggca atctctcgac
     2221 cttgtcgacg caccgccaat cgccgagctc gtaaggaaag tctgtgccga gcagcaaacg
     2281 ttccgcgccg actttgtttc tgagaaaacc gagggtttcc acgtcataaa ctaatgtgtc
     2341 gaag
//
LOCUS       DATIRS010000257         2420 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_610064, whole genome shotgun sequence.
ACCESSION   DATIRS010000257 DATIRS010000000
VERSION     DATIRS010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2420
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_610064"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            162..1607
                     /locus_tag="VLM90_03225"
     CDS             162..1607
                     /locus_tag="VLM90_03225"
                     /inference="COORDINATES: protein motif:HMM:NF017669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF853 domain-containing protein"
                     /protein_id="HSQ11995.1"
                     /translation="MTIAQGDNRLVLLPGMANRHGLIAGATGTGKTVTLRVMAESFSR
                     IGVPVFMADVKGDLSGIAKPGTANPKIGERVAKLAIEGFQFSAYPVVFWDLFGEQGHP
                     VRTTISDMGPLLMARLLNLNETQSGVLTMVFKIADDNGMLLLDLKDLRAMLQHVGDNA
                     AQFKTQYGNVSAASVGAIQRGLLGLEEQGADKFFGEPALDLEDLMQTDSQERGMINIL
                     TADKLINAPKLYATFLLWLLSELFERLPEVGDPEKPKLAFFFDEAHLLFNDAPNALLE
                     KIEQVIRLIRSKGVGVYFVTQNPLDVPEVVLGQLGNRVQHALRAFTPRDQKAVKAAAA
                     TFRQNKDIDVETAITELGVGEALVSFLNDKGQPTVVERALIYPPLSQLPPLSAGEREQ
                     VVKGSTLYGHYEKIVDRDSAYEMLKARAPQAEAGPAPAQSGVGWQGEAGKLLGALSKS
                     AAHAIGSQVGREIIRGVLGSIFGSTTTRRRR"
     gene            complement(1795..2235)
                     /locus_tag="VLM90_03230"
     CDS             complement(1795..2235)
                     /locus_tag="VLM90_03230"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ11996.1"
                     /translation="MRDAKATGVLMDVGHGLHNLNFDVARKVLDQGLHPDGVSTDGHR
                     GNRAGPVYDLPTTMAKLMALGFTLNQVVEMATANAAKLLGRTGQLDTLRIGDQAEISV
                     LKIEDREWQALDSQKGMIPAHQTITPVYAIRGDTIYEPLPVERP"
     gene            complement(2205..>2420)
                     /locus_tag="VLM90_03235"
     CDS             complement(2205..>2420)
                     /locus_tag="VLM90_03235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ11997.1"
                     /translation="RKLGDTLKIPLLIHIGESWTKGTEPVAIGDVLKYLVPGDIITHM
                     FTVHPGGLLDANGICGRRCATPRQPAY"
BASE COUNT          487 a          658 c          737 g          538 t
ORIGIN      
        1 aattccaacg cgttcgttct ggtgacttgg acgtgtgcga tagctttcca ttcacgctgc
       61 atgagtttat atatgagttg gactcaattg tgacgcgtat cagttggcgt agcgctcgct
      121 aagtctttga aatttagggg gttcttgcga tgttggaggg gttgacgatt gctcaaggcg
      181 ataaccgatt ggttttgttg ccgggtatgg cgaaccgcca tggtctgatc gccggtgcca
      241 ccggaaccgg caagacggtg acgctacggg tgatggcgga gagttttagc cgcatcggcg
      301 tgccggtatt tatggcggat gtgaaaggcg atttatcggg tatcgctaag cctggcacgg
      361 cgaatcctaa aatcggcgaa cgggtcgcca agctcgccat cgaaggattt caattttccg
      421 cctatcccgt ggtcttctgg gatctcttcg gcgaacaagg ccatccggtg cggaccacca
      481 tctcggacat ggggccgctg ctcatggcac gcttgctcaa tcttaacgag acccagagcg
      541 gcgtgctgac gatggtcttc aaaatcgccg atgacaacgg catgctgctg ctcgatctga
      601 aagatctgcg cgccatgctg caacatgtcg gcgacaacgc ggcgcagttc aaaacccaat
      661 atggcaatgt ctcggcggcg agcgtggggg cgatccagcg cggcctgttg ggactcgaag
      721 agcagggcgc cgacaagttt ttcggcgagc cggcgctcga tctcgaagat ctgatgcaga
      781 ccgacagtca agagcgcggt atgatcaata tcctgaccgc cgataagctt atcaatgcgc
      841 ccaagctcta cgcgacgttc ttactctggc tgctgtccga attattcgaa cgcttgccgg
      901 aggtgggcga tccggagaaa cccaagctgg catttttctt cgacgaagcg catctgcttt
      961 tcaacgatgc gcccaatgcc ttgctcgaga agatcgagca ggtgatccgc ctaatccgtt
     1021 ccaagggggt gggcgtgtac ttcgtgacgc agaatcccct cgacgtgccc gaggtcgtgc
     1081 tcggccagct cggcaatcgc gtgcagcatg cgctgcgcgc gttcacgccg cgggatcaga
     1141 aggcggtgaa agccgctgcg gcaacctttc ggcagaacaa agatatcgac gtcgaaaccg
     1201 cgatcaccga actcggtgtc ggcgaagcgc tggtgtcgtt tctcaacgac aaaggccaac
     1261 cgacggtggt cgagcgcgcg ctgatctatc cgccgttgag ccagctgccg ccgttgtctg
     1321 cgggggagcg cgagcaggtc gtcaaaggtt caacgctcta cggccactat gaaaagatcg
     1381 tcgaccgcga ctcggcctac gagatgctca aagcccgagc gccgcaggca gaagccggcc
     1441 cggcgccagc gcagagcggt gtcggttggc agggcgaagc cggaaaattg ctcggcgccc
     1501 taagtaaaag cgccgcgcat gcgatcggca gccaggttgg cagagaaatt atccgcggcg
     1561 ttttgggatc gatcttcggt tcgactacaa cgcgaagaag gagataggat tctttaaccg
     1621 caaagtacgc aaagtacgca aaaaagattt ctgaatcgtc ggggcaggtt tgaaatccgc
     1681 ccttttagat tgagtcggcg gttcgttcga aaaccttgct cccaggctga tctcttccag
     1741 tcgctcttct tttcttacct ttgcgttctc tgcgtacttt gcggtgaaat attcttatgg
     1801 tctttccacc ggcaacggct cgtagatcgt gtcgccgcgg atggcgtaga cgggtgtgat
     1861 ggtttgatgg gcggggatca tgcctttttg tgagtcgagg gcttgccatt cacggtcttc
     1921 aattttcaaa actgaaattt ccgcttgatc gccgatgcgc agggtgtcga gttgccccgt
     1981 tcggcccagg agcttggcgg cgttcgccgt cgccatttcc actacctgat tcagggtaaa
     2041 tcccagcgcc atcaatttcg ccatggtcgt cggcagatcg taaaccgggc cggcgcggtt
     2101 gccgcggtgg ccgtcggtgg agaccccatc ggggtggagg ccctggtcga gcactttgcg
     2161 agcgacgtcg aagttcaaat tatgcagacc atggccgacg tccatcagta cgccggttgc
     2221 cttggcgtcg cgcacctgcg gccacagatt ccattggcgt cgagcaaacc gcccggatgc
     2281 accgtgaaca tatgggtaat gatgtcgccg gggacgagat acttgagcac gtcgccgatc
     2341 gcgactggct cggtgccctt ggtccaactt tcgccgatat gaatcagcaa aggtatcttg
     2401 agcgtgtcgc cgagtttgcg
//
LOCUS       DATIRS010000258         1706 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_511130, whole genome shotgun sequence.
ACCESSION   DATIRS010000258 DATIRS010000000
VERSION     DATIRS010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1706
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_511130"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..429
                     /locus_tag="VLM90_03240"
     CDS             <1..429
                     /locus_tag="VLM90_03240"
                     /inference="COORDINATES: protein motif:HMM:NF018349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1152 domain-containing protein"
                     /protein_id="HSQ11998.1"
                     /translation="WGVFGYGSDGELTVDEIELALSKLGAAGALLGAWSLTPKIAAEL
                     EAVIKTVPTEASAIPVQCFRGAWGRHDIRRGERQVKLTPLTALTFFIATGKLYDTLAR
                     PAQAVRRSSSLDQANDALHALGIATELDYERKFYQAALTK"
     gene            426..1682
                     /locus_tag="VLM90_03245"
     CDS             426..1682
                     /locus_tag="VLM90_03245"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ11999.1"
                     /translation="MIRNLFGDPQRDAIILMISRGVRAFAFSYLGVIFTIYLSQLGYS
                     TMTVGFVVTTAYAASAVLTALWGYLSDRYGRKNILMLLAALTIVSNLIYMFSSHLFFI
                     IAAVIIANVGAGGSGAGGQGGGPMSPVEQALLAEKCSAENRNKVFAANAFVGSMSGSL
                     GALLSGLPQHLQEQWSWPAIDSYKPLFALTILFSIVLICAYSRIDEHHVYRKREKKTL
                     ATKANKFVLKMSLLGMVDNLGGGLISPLLAYWFFLRYGVELKSLGFMFFLSYLLAAMS
                     FLTAPIIARKIGIVRTMAFSHGLASLIWLCLPLAPTFAIAATLTVIRSYLAYMDNPLR
                     SSFIMGVVRPEDRGAAAGLTTLSRHVPVTISPTLSAYMMQAFALHVPILIGGSLQLLH
                     DCVFYYMFRNVKPPEEQGAQAQTAKA"
BASE COUNT          311 a          546 c          461 g          388 t
ORIGIN      
        1 tggggcgtct tcggctacgg cagcgacggc gaactgacgg ttgacgaaat cgagctggct
       61 ttgagcaagc tcggcgctgc cggcgctctg ctcggcgcct ggtcgctgac accgaagatc
      121 gccgccgagc tcgaagcagt catcaagacc gtgccgacgg aagccagcgc gatccccgtg
      181 caatgctttc gcggcgcctg gggacgccat gacatccgcc gcggcgaacg gcaggtgaag
      241 ttgacaccgc tcaccgccct gacttttttt atcgccaccg gcaaacttta tgatactctc
      301 gcccgacccg ctcaagccgt gcgccggagc tcgtccctcg accaagccaa cgacgcgctc
      361 cacgccctcg gtatcgccac cgaactggac tacgaacgga aattttatca ggcggcactg
      421 acaaagtgat tcgaaatctc ttcggcgacc cgcagcggga tgcgattatt ctaatgattt
      481 cccgcggcgt gcgcgccttc gcgttctcct atttgggcgt gatcttcacc atctatctga
      541 gtcagctcgg ctactcgacc atgacggtcg gtttcgtcgt caccaccgcc tacgccgcca
      601 gcgcggtgct cacggccctg tggggttatc tgtcggatcg ttacgggcgc aagaacatct
      661 tgatgctgct cgccgcgctg acgatcgttt cgaaccttat ttatatgttt tccagccatt
      721 tattctttat tatcgccgcc gtcatcatcg ccaacgtcgg cgccggcggt tcgggggccg
      781 gcggccaagg cggcgggccg atgagcccgg tcgagcaagc cctgctcgcg gaaaaatgtt
      841 cggcggagaa tcgcaacaaa gttttcgccg ccaacgcgtt tgtcggctcc atgtcgggct
      901 ccctcggcgc cctgttgagc ggcctgccgc agcatctgca agagcaatgg agctggccag
      961 cgatagattc ctacaagccg cttttcgctc tgaccatttt attcagcata gttctcattt
     1021 gcgcctattc gcgaattgac gaacatcacg tctatcgcaa gcgcgaaaag aaaaccctcg
     1081 ccaccaaggc gaataagttc gtgctcaaaa tgtcgctcct cggcatggtc gacaatctgg
     1141 gcggcggttt gatcagcccg ctgctggcct attggttttt cttgcgctac ggcgtcgaac
     1201 taaaatcctt gggtttcatg ttctttctgt cctacttgct cgccgccatg tcatttctca
     1261 ccgcgccgat catcgcgcgc aagatcggca tcgtccgcac catggcattt tcccatggct
     1321 tggcttcgct gatctggctc tgtctgccgt tggcgccgac cttcgccatc gccgccactc
     1381 tgacggtcat ccgttcctat ctggcctaca tggacaatcc gctgcgcagc tccttcatca
     1441 tgggagtggt gcggccggaa gatcgcggcg ccgcggccgg cttgacgacg ctgtcgcgcc
     1501 atgtgccggt gaccatcagt ccgaccctat cggcgtacat gatgcaggcc ttcgcccttc
     1561 atgtgccgat cctgatcggc ggctctttac aacttttaca cgattgcgtt ttttactaca
     1621 tgttccgcaa cgtcaaaccg ccggaagaac aaggagctca ggcgcaaacg gccaaagctt
     1681 aacctatggg aatcctgcgc aacctg
//
LOCUS       DATIRS010000259         1853 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1101683, whole genome shotgun sequence.
ACCESSION   DATIRS010000259 DATIRS010000000
VERSION     DATIRS010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1853)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1853)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1853
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1101683"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            81..1160
                     /locus_tag="VLM90_03250"
     CDS             81..1160
                     /locus_tag="VLM90_03250"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ12000.1"
                     /translation="MSKQEKKFTGEIGIHYPLHVLNRYSLPELIGLAETAWQTMGKLG
                     FSQVWTNDNLEYRSVLASSAAIVARLPVKLGTAVTVPYFRNPVDLAMAFATMSELMDG
                     REISLGLGPGSRSILAHQVERVKPLTIMAELATALRTLFAGAALRSSEMPVLASYFHM
                     NAEHYALRFKAQSPIRLYYGPSLLKPAVLDLIARHFDGMILQTLYGIADMETSLARLQ
                     SARAQSPLGEPLRKVMLLNASVSRDGEAARQHAKRFVSHIASGWPDEVLKAKGIDPQA
                     MQAVRKAYAENRGVDYAASLTPDEAVDRLIIAGTPAQCMARIAELFSLAARDGFSQVT
                     LGVPLGPNIPEVIDLWGKEILPALR"
     gene            complement(1258..1455)
                     /locus_tag="VLM90_03255"
     CDS             complement(1258..1455)
                     /locus_tag="VLM90_03255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12001.1"
                     /translation="MQLSSMEESPKLPDPLHPRSTGYDSYGRGSANPSLLIGSGVCDP
                     ISGSLPHHYYLCRVHTAVPLD"
     gene            1454..>1853
                     /locus_tag="VLM90_03260"
     CDS             1454..>1853
                     /locus_tag="VLM90_03260"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HSQ12002.1"
                     /translation="MIFRIATLNLEQDHKCWEARRDLIAEQFGELRPDIWALNEIHIP
                     SQTGRWLQSATVKTTGIKYALVQQSKAGEDGRTQGEGLLTRYPVVETANLDYHSHDCV
                     ALVARIEIEGRMLNVYVTHLIAAKVDDSARQ"
BASE COUNT          384 a          513 c          569 g          387 t
ORIGIN      
        1 cgcaactttt ccgactcgcc aaaagagtaa cgcaaaatct tctttgactt tgtttcacgg
       61 gctggggtac ctggagcgcc atgtcaaaac aagaaaagaa atttaccggc gaaatcggca
      121 ttcactatcc gcttcatgtc ctcaatcgtt actcactgcc ggagttgatc gggctcgccg
      181 agacagcgtg gcagacgatg gggaaacttg gtttcagcca ggtttggacc aacgacaatc
      241 tggaatatcg cagcgtgttg gcgagttcgg cggcgatcgt ggcgcgtttg cctgtcaaac
      301 ttgggaccgc ggttacggtg ccgtactttc gtaacccggt cgatttggcc atggctttcg
      361 cgaccatgtc cgagctcatg gacggtcggg aaatctccct gggcttggga cctggatcac
      421 ggtcgatcct cgcgcatcaa gtggaacggg tgaaaccgct cacgatcatg gccgaattgg
      481 cgacggcatt gcgcacgctg ttcgccggcg cggcgctaag aagcagcgag atgccggtgc
      541 tggcgtccta ttttcatatg aacgcggaac actatgcgct ccgcttcaag gcccaatcgc
      601 cgatccgtct ttattatgga ccgagcctgc tcaaaccggc ggtgctcgat ctgatcgcac
      661 gccactttga cggcatgatc ctccaaactc tctatggcat cgccgacatg gaaacatcgc
      721 tggcgcgtct gcaatcggcg cgagcgcaat cgccgctggg tgagccgctg cgcaaagtca
      781 tgctgctcaa cgcatcggtt tcgcgcgacg gagaggcggc caggcagcat gccaaaaggt
      841 tcgtctcgca tatcgcgtcc ggctggccgg atgaagtcct caaggcgaaa ggcatcgacc
      901 cgcaggcgat gcaagcggtg cgaaaagctt acgccgagaa tcgcggtgtc gattatgctg
      961 cttcgctgac gccggacgaa gcagtggatc gtctgatcat cgccggcacg ccggcccagt
     1021 gcatggcgcg gatcgccgaa ctcttttcat tggcggcgcg cgatggattt tcgcaggtta
     1081 ccctcggcgt tcccctcgga cccaatattc ccgaagtgat cgacctctgg ggcaaagaaa
     1141 tcctgccggc cttgcgctga ctttcgtgct tctcgtcgct tgaccgtcgt gatgttgctc
     1201 gtggacaata gaatgtcgag tcggagtcgg gatatggaga ttgaaggcca gtcgggtcta
     1261 atcgagcggg accgccgtgt gcacccggca aagatagtaa tggtgcggca acgagccgct
     1321 gatcggatcg cagacacccg agccgatgag caggcttgga ttggccgagc cgcggccgta
     1381 ggaatcgtag ccggtagatc gagggtgaag cgggtccggt aatttggggc tttcttccat
     1441 cgaggacagc tgcatgattt ttcgcatcgc gacattaaat ctggaacaag atcataagtg
     1501 ttgggaagcg cgccgggatc tcattgccga gcagtttggc gagttgcgtc ccgacatctg
     1561 ggctctcaat gagattcata tcccgagcca gacaggccgc tggctgcaga gcgcgactgt
     1621 gaagacgaca ggaattaaat atgcgctggt gcagcagtcc aaggccggcg aggacgggcg
     1681 cactcagggc gaagggctgc tcacgcgcta cccagtcgtc gagacggcga atcttgatta
     1741 tcactcgcac gactgcgtgg cgttggtggc gcgcattgaa atcgaaggcc ggatgctcaa
     1801 cgtctacgtg actcatctga tcgccgcgaa ggtggacgat tccgcgcgcc aat
//
LOCUS       DATIRS010000260         1517 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1887764, whole genome shotgun sequence.
ACCESSION   DATIRS010000260 DATIRS010000000
VERSION     DATIRS010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1517
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1887764"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1517
                     /locus_tag="VLM90_03265"
     CDS             <1..>1517
                     /locus_tag="VLM90_03265"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSQ12003.1"
                     /translation="ILSDLIGLPQSCIHFIEPEVGGGFGARGEFYPEDFLIPFAARHF
                     RKPICWIEDRSENLKAMNQSRQQNHRVRIGVKSDGTILAMDAEILFDMGGYTRTHGGV
                     PAIAASAMLRGPFRIKNYRANVFCVLTNKTPVGTYRSPGRYEANFVRERLADMIAHRL
                     RLDPADVRRRNLIRHEEMPYDLGKHPFHYMVYDTGDFLGQMNRALEQFGYDDWQKKVA
                     ATKNESCAIGVGIGCFVETSGIGPWEYARIEIDNGGKVVLYSGCNSVGQGIATALSQI
                     VADELQCSIDDVRVVHGDTAKVPYGNGSNASRSTVMAGSAAVGASRKVKDKLLRLASA
                     NLEIDAADLILRDGKIVAKGAPERSLTFTELARLALPGPALKAGITPGISEEDFFATD
                     KRPFPYGVHVAAVEVDKETGKIKILDYLVSEDVGRKINPMIIEGQMAGGLAQGIGGAI
                     LEEFVYSEDGQPLATNFMDYLLPTAMDMPKAQFISTEDFPSPHNPWGVKGAGEGG"
BASE COUNT          329 a          448 c          443 g          297 t
ORIGIN      
        1 gcattctctc ggatctgatc ggcctgccgc aaagctgcat ccacttcatc gagcctgaag
       61 tgggcggcgg cttcggcgcc cgcggtgagt tttatccgga ggactttttg atccctttcg
      121 cggcgaggca ttttcgcaaa ccgatctgtt ggatcgaaga tcggtcggaa aatctcaagg
      181 cgatgaatca atcgcgccag caaaaccacc gcgttaggat cggcgttaaa agcgacggca
      241 ctattctagc gatggatgcc gagattctct tcgacatggg cggctatact cgcacccacg
      301 gcggtgtgcc ggcgatcgca gcctccgcca tgctgcgcgg tccgttccgg atcaagaact
      361 accgcgccaa cgtattctgc gtgctcacca acaaaactcc ggtcggcacc taccgcagcc
      421 cgggacgcta cgaagcgaat ttcgtgcgcg agcggctggc cgacatgatc gctcatcgtt
      481 tgcggctaga tccggcggac gtacggcgac gcaatttgat tcggcacgaa gaaatgccct
      541 atgaccttgg caaacatcct tttcattaca tggtttatga taccggcgat tttctcggcc
      601 agatgaatcg agcgcttgag cagttcggct atgacgactg gcaaaagaaa gttgccgcga
      661 ccaagaacga atcctgcgcc atcggcgttg gcatcggctg cttcgtcgaa accagcggga
      721 tcggtccatg ggaatacgcc cggatcgaga tcgataatgg cggcaaggtg gttctctact
      781 ccggctgcaa ctctgtcggc cagggcattg caaccgcgct gagccaaatc gtcgccgacg
      841 agctgcaatg ttccatcgac gacgtgcgcg tggtgcacgg cgacaccgcc aaagttccct
      901 acggcaacgg cagcaacgcc agccgctcta cggtgatggc cggcagcgcc gcagtcggcg
      961 cttcgcgcaa agtcaaagac aaactcctgc gcctggcctc ggccaatctg gaaattgacg
     1021 cggcggattt gattttacgt gacggtaaga tcgtcgccaa aggcgcgccc gagcgctcgt
     1081 tgaccttcac cgagctcgcg cggctcgcgc tccccggtcc agcactaaag gcgggcatca
     1141 caccgggcat ttcggaagaa gacttttttg ccactgacaa acgcccattt ccgtacggtg
     1201 tccatgtcgc cgcagtggaa gtcgataagg agactggcaa gatcaaaatt ctcgactacc
     1261 tggtcagcga agatgtcggc cgcaaaatca atccgatgat tatcgaaggc cagatggccg
     1321 gcggcttggc ccagggcatc ggcggcgcga tattggagga attcgtctac agcgaagacg
     1381 gccaaccgct agcgaccaat ttcatggatt atttgctgcc gacggccatg gacatgccca
     1441 aggcgcagtt catttcgacg gaagacttcc catcgccgca caatccctgg ggcgtcaaag
     1501 gggccgggga gggcggg
//
LOCUS       DATIRS010000261         2027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1101808, whole genome shotgun sequence.
ACCESSION   DATIRS010000261 DATIRS010000000
VERSION     DATIRS010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2027
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1101808"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(211..>2027)
                     /locus_tag="VLM90_03270"
     CDS             complement(211..>2027)
                     /locus_tag="VLM90_03270"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HSQ12004.1"
                     /translation="ADTLWANWPRLLAALALATTFSCSPVARAPSSPQSHQSSSESRR
                     LNDIFENYFEAYLELFPLYATQIGDHRYDHRLAINIDAQHLAAQRQLYQETLEQLAAI
                     ERSVLVPAERLFHEVLDRSLRLRLEASRFPSHLLPVRQLGSLVIEFPLMGSGGGIHPF
                     KTVADYDNFLQRIDGFVAWVDSAIVNMREGIQRGVVQPRAVIERTLPQLDAMIVADPQ
                     ASLFYQPIRRLPAHFSSAEGERLNRAYQAAIEAKILPTYRKLSAFVRNEYLPATRQTT
                     AWSALPDGEAWYDYLVRSQTTSDLTPDEIFQLGLDEIARIRQEMERLRLDSQFSGTIE
                     EFAKHLSQNAPRPHRSRPALVAAYQAIDRIVQPQLAKLFGRIPAATFEVRAIEEFREQ
                     SAPSQYWSPAPDGSRPGIFYVNARGIENSPRRPSEPLFLHEAIPGHHFQISLQMERND
                     LPRFQRFGGYSAFSEGWALYAESLGHELGLYADTEQYFSRLNSELFRAARLVVDVGLH
                     RKGWTRAQALKFMAETTFSSEDGVASEIDRYIANPAQALTNKIGQLAISAIRVKAETA
                     LGNRFDLRAFHDELLKDGALPMSVLQAKMARWIATNSR"
BASE COUNT          390 a          556 c          665 g          416 t
ORIGIN      
        1 tcagacggcg ctcattgccg gtcatcacgc gcgccggcgc cagtttgcgc cggcgcagcg
       61 gcggataggt ctcttccagg gtgctaatct cggcgcgcat cgttcgaagt cgtattgtaa
      121 cccgccgggg cattgattgc atccgagcgg aagaattagc cgcaaagaac ttagcgcagt
      181 agagccgcaa ccaaatggga aagagtttta tcaacgcgag ttggtcgcga tccagcgagc
      241 cattttagct tgtagcacgc tcatgggcag ggcgccgtct ttgagcaact cgtcgtgaaa
      301 ggcgcgcagg tcgaatctgt tgccgagcgc cgtttcggct ttgacgcgga tcgccgagat
      361 cgccagctgg ccgattttat tagttagcgc ttgggctggg ttggcgatgt agcggtcgat
      421 ttccgaagcc acgccgtctt cgctgctgaa ggtggtctcg gccatgaact tcaacgcttg
      481 cgctcgcgtc caacctttac ggtgcaggcc gacgtcgacg accaggcgcg cggcacgaaa
      541 cagttccgaa ttgagccggc tgaaatattg ctcggtgtcg gcgtaaagcc cgagctcgtg
      601 gccgaggctt tcggcgtaaa gcgcccaacc ttcactaaag gcgctatagc cgccgaatct
      661 ctggaagcgc ggcagatcgt tacgttccat ttgcaacgag atctggaaat ggtggccggg
      721 aatcgcctcg tggagaaaca gcggttcgga tgggcggcgc ggactgttct cgatgccgcg
      781 ggcgttgacg tagaagatgc ccggccgtga gccgtccggc gccggcgacc agtattgcga
      841 cggcgccgat tgctcgcgaa actcttcgat tgcgcgcact tcgaaggttg ccgccggaat
      901 acggccaaat agctttgcca gttgcggctg cacgatccgg tcaatcgctt gatacgctgc
      961 gacgagagcg gggcggcttc gatgggggcg cggcgcgttc tgggaaagat gtttggcgaa
     1021 ctcttctatc gtgcctgaga actggctgtc gagccgcaag cgctccattt cctggcgaat
     1081 ccgggcgatc tcatcgaggc cgagctgaaa gatctcgtcc ggtgtcagat cgctggtggt
     1141 ttggctgcgg actagatagt cgtaccaggc ttcgccatcg ggcagcgccg accacgccgt
     1201 ggtttgccgt gtcgccggca aatactcgtt gcgcacaaac gcgctgagct tgcggtaagt
     1261 tggcaggatc ttcgcttcga ttgctgcttg ataggcgcga ttcagtcttt cgccctcggc
     1321 ggagctgaaa tgtgccggca atcgccggat cggttgatag aacaagcttg cttgcggatc
     1381 ggcgacgatc atcgcgtcga gctgcggcag ggttctttcg attaccgcgc gcggctggac
     1441 aacgccgcgc tggataccct cgcgcatgtt gacgatagcg ctatcgaccc aggcgacaaa
     1501 gccgtcgatg cgttgcaaga aattgtcgta atcggcgacg gttttgaacg gatgaatgcc
     1561 gccgccggaa cccatcaacg ggaactcgat caccagactg cccaactggc gcaccggcag
     1621 cagatggctg gggaagcggc tggcttccag ccgtaatcgc agtgagcggt cgaggacttc
     1681 atgaaacagc cgctcggccg ggactaacac gctgcgctcg atggcggcca attgctcgag
     1741 agtttcttga tagagctggc gctgtgccgc gaggtgctga gcgtcgatgt tgatggccaa
     1801 gcgatggtca taacggtgat cgccgatctg ggtggcgtag agtgggaaaa gctcgagata
     1861 ggcttcgaag tagttttcga aaatgtcatt gagccggcgc gactccgagg aagactggtg
     1921 agattgcggt gaggacggcg ctcgcgccac tggggagcaa ctgaatgttg tcgcgagcgc
     1981 cagcgctgcc agcaggcgcg gccaatttgc ccaaagcgta tctgcgg
//
LOCUS       DATIRS010000262         1602 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_413666, whole genome shotgun sequence.
ACCESSION   DATIRS010000262 DATIRS010000000
VERSION     DATIRS010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_413666"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..529)
                     /locus_tag="VLM90_03275"
     CDS             complement(<1..529)
                     /locus_tag="VLM90_03275"
                     /inference="COORDINATES: protein motif:HMM:NF024581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HSQ12005.1"
                     /translation="MEHAGHKHESATGEKITALDLPELYQCVHCGLCLNHCPTYRVLR
                     LEPESPRGRIHLVKAAADGRVELNERFKEHLYLCLLCRACETACPSGVQYGRIAEAAR
                     EQLGPPGSAWARAVLKLVFARLLPYPRRLHLSFRLLWLYQRSGLQKISRMLLPAKLRE
                     MDSLLPVIPSRFFLPK"
     gene            complement(612..>1602)
                     /locus_tag="VLM90_03280"
     CDS             complement(612..>1602)
                     /locus_tag="VLM90_03280"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HSQ12006.1"
                     /translation="GPHTLAYGVTTNHVLGAEVVLDDGRIVWLGGEVPDSPGYDLCGV
                     FVGSEGTLGIVTKVVVRLMRARESVRTLLAIFDQMDAATQSVVDITAAGIIPAALEMM
                     DRTTIEAVERGAPVGLPRDAEAVLIVEVEGLAEHTECAVKLASEICQRSGAREVKLAK
                     DEAERQLLWKGRKGAFGAMGVLAPNYYVQDGVVPRSKLPEIMRRITEISKQFNLRIAN
                     VFHAGDGNLHPNILFDMRAPGELDRVIEAGAATLRACVELGGSITGEHGVGLEKKAYI
                     GLLFNEADLEAMARVRRAFDPDSRFNPAKLFPTPASCGEIRLQPAQIPAGLWI"
BASE COUNT          314 a          500 c          488 g          300 t
ORIGIN      
        1 ccttaggaag aaaaaatcgc gacggaatca ccggcagtaa agagtccatt tcacggagtt
       61 tcgccggcag cagcatgcgt gagatctttt gcaggccgct gcgttggtag agccagagca
      121 gcctgaagct aaggtgaagc cgccgaggat aaggcagcag gcgggcaaaa accagcttca
      181 ggaccgcccg cgcccaagcg gagcccggtg gcccgagctg ctcgcgcgcc gcctcggcga
      241 tgcggccata ctgcacgccc gatggacaag ccgtttcgca ggcgcggcag agcaggcaaa
      301 gatagaggtg ttccttgaaa cgctcgttga gctcgacgcg cccatcggcg gcggctttga
      361 ccagatgaat tctgccgcgc ggcgattccg gctccaaccg tagcacgcga taggtcggac
      421 agtgatttag acaaaggccg cagtgcacgc attggtagag ctcgggcaga tcgagcgccg
      481 tgattttttc tcccgtggcg ctctcgtgct tatgaccggc atgctccaag tgctactgct
      541 ccttaccgtt tcaagtttct agctccgggt gttcaacgag aaagtggcaa atcgaaacta
      601 gaaactacct tctagatcca caagcccgct ggaatctgcg ccggctgcag acggatttca
      661 ccgcagcttg ccggtgtcgg gaaaagtttt gccggattga aacggctgtc gggatcgaac
      721 gcgcggcgca cccgcgccat ggcttccagg tccgcttcat tgaatagcag cccaatgtaa
      781 gcctttttct ccaagcccac gccgtgctcg ccagtgatgc tgccgccgag ttcgacgcag
      841 gcgcgcaaag tggcggcgcc ggcttcgatg acacggtcga gttcgcccgg cgcgcgcatg
      901 tcgaacaaaa tattcggatg gagattgcca tcgccggcgt gaaacacgtt ggcgatgcgc
      961 agattgaatt gcttgctgat ctcggtgatg cgccgcatga tctcgggcag cttgctgcgc
     1021 ggcacgacgc cgtcctgaac atagtaattg ggcgcgagca cgcccatggc gccgaacgcg
     1081 ccttttctgc ctttccacaa taactgacgc tcggcttcgt ccttggccag tttcacttcg
     1141 cgcgcgccgc tccgttggca aatctcgctc gcgagcttca ccgcgcactc ggtatgctcg
     1201 gcaagcccct cgacctcgac gatcaatacc gcttcagcgt cgcgcggcaa ccccaccggc
     1261 gcgccgcgct ccaccgcttc gatggtcgtg cggtccatca tctccagcgc ggcaggaatg
     1321 atcccggcgg cggtgatatc gacgacggat tgagttgcgg catccatctg atcaaagatc
     1381 gccagcaagg tgcgcaccga ttcgcgcgcg cgcatgaggc gcacgacgac tttcgtgacg
     1441 attccaagag tcccttcgga gccgacgaag acgccgcaga gatcgtagcc gggcgagtcc
     1501 ggcacttcgc cgccgagcca gacgatgcgg ccgtcgtcga gcactacttc ggcgccgagc
     1561 acatgattgg tcgtcacgcc gtaggcgagc gtgtgcgggc cg
//
LOCUS       DATIRS010000263         1593 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_806561, whole genome shotgun sequence.
ACCESSION   DATIRS010000263 DATIRS010000000
VERSION     DATIRS010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_806561"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(13..1392)
                     /locus_tag="VLM90_03285"
     CDS             complement(13..1392)
                     /locus_tag="VLM90_03285"
                     /inference="COORDINATES: protein motif:HMM:NF004992.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-containing oxidoreductase"
                     /protein_id="HSQ12007.1"
                     /translation="MTIRFDAIVIGTGQAGPALAARLSGAGMKVAVIERNLFGGTCVN
                     TGCSPTKTLVASAYAAHLARRAGEYGVVAGGEISVDMKRVKARKDEISGKSSTNVESW
                     LRGLKNAAVYQGHGRFENARTVRVNEEVLEAEKIFINVGGRALAPPMPGLNQVSYLTN
                     SSMMDVNFLPEHLIIIGGSYIGLEFAQMYRRFGAKVTVVEKAARLIAREDEDVSEAVK
                     RILEKEGVQVRLKAECMTVHKNGERIVIGLDCAEGSREVDGSHLLLAVGRVPNTDDLG
                     LDKAGVETDSAGYIKVDDYLRTNVPGIWALGDCNRKGAFTHTAYNDYEIVAANLLDND
                     PRKVSDRITTYALFIDPPLGRAGMTEAEVRALGHKALVGARPMTRVGRAVEKGETEGF
                     MKVIVDAETKQILGAAILGVTGDEVVHSLLDVMYAKAPYTTVSRAMQIHPTVSELVPT
                     LLQEMKPLG"
BASE COUNT          295 a          524 c          442 g          332 t
ORIGIN      
        1 cccttcatcc tttcaaccaa gcggtttcat ttcctgcagc aaggtcggca ccagctcgga
       61 caccgtcgga tggatctgca tcgcccggct gacggtcgtg taaggcgcct tggcgtacat
      121 gacgtcaagc aacgagtgaa ccacttcgtc gccggtgacg ccgagtatcg ccgcgccgag
      181 gatctgcttg gtctctgcgt cgacgattac tttcatgaat ccttcggtct cgcccttttc
      241 caccgcgcgc cccacccgcg tcatcggccg agcgccgact agcgctttat gccccaatgc
      301 cctcacctcc gcttcggtca taccggcgcg gccaagcggc ggatcgatga acagggcgta
      361 ggtcgtgatg cggtccgata ccttgcgcgg atcgttgtct aggagattgg ccgcgacgat
      421 ctcgtagtcg ttgtaggccg tgtgcgtaaa cgcgccttta cggttgcagt cgccgagcgc
      481 ccagatgccg ggaacattgg tgcgcagata gtcgtcgact ttgatgtagc cggcgctatc
      541 ggtctccacc ccggctttgt ccaatcccaa atcgtcggtg ttcggcaccc gccctacggc
      601 aagcaagaga tgcgagccat ccacctcccg gctcccttcg gcgcagtcca ggccgatgac
      661 gatgcgctca ccgttcttat gcacggtcat gcactccgct ttcaagcgca cttgcacgcc
      721 ttccttctcg aggattcgct tgaccgcctc ggaaacatcc tcatcctcgc gcgcgatcag
      781 acgcgcggct ttctcgacga cggtgacctt ggcgccgaag cgccggtaca tctgcgcgaa
      841 ctccaaaccg atgtagctgc cgccaatgat gatcagatgc tcgggcaaaa aatttacgtc
      901 catcatgctc gaattggtga ggtagctcac ctgattcagc ccgggcatcg gcggtgccag
      961 cgcgcgcccg ccgacgttga tgaatatctt ttctgcctcc agaacttcct cgttgacgcg
     1021 cacggtgcgc gcgttctcga aacggccgtg gccctgatag accgcggcgt tcttcaagcc
     1081 gcgcagccag ctctcgacgt tcgtgctgga cttgccggag atttcgtcct tgcgagcctt
     1141 cacccgtttc atatcgacgg agatttcacc gcccgcgacg acgccgtatt ccccggcgcg
     1201 ccgcgccagg tgcgccgcgt aggcgctcgc caccagagtc ttcgtgggac tgcagccggt
     1261 gttgacgcag gtgccgccaa aaagattgcg ctcgatgacg gccactttca tgcccgcccc
     1321 ggagaggcgc gcggcgagtg ccggcccagc ctggccggtg ccgataacaa tcgcgtcgaa
     1381 tcgtatcgtc ataaactttc tccctctctc ggcaatttat tgggtgtgag atccttgctc
     1441 gctttcctca tcgccaccca actgaaaaac cgcgaaaaac aagaaaaccc ggccatcgtg
     1501 atcgtgcagc gtgaacgaat ccgtacacga tcacgaacta cgaacacgaa agagcgcgcg
     1561 gggatgcagc gcaaagaacc ctatgagggt ttt
//
LOCUS       DATIRS010000264         1538 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_709086, whole genome shotgun sequence.
ACCESSION   DATIRS010000264 DATIRS010000000
VERSION     DATIRS010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1538
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_709086"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            86..370
                     /locus_tag="VLM90_03290"
     CDS             86..370
                     /locus_tag="VLM90_03290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12008.1"
                     /translation="MAVLDPTLALLDETDSGLDIDALRVIAGGVNALRSPNRAMIVIT
                     HYQRLLDYIVPDFIHVLYNGRIVKSGTKELALELESKGYDWLKGEGAAAH"
     gene            394..>1538
                     /locus_tag="VLM90_03295"
     CDS             394..>1538
                     /locus_tag="VLM90_03295"
                     /inference="COORDINATES: protein motif:HMM:NF013614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SufD family Fe-S cluster assembly protein"
                     /protein_id="HSQ12009.1"
                     /translation="MLSAESKKTYIAAFKQLRAGGALPGPAWLEQLRQAGIASFDAMG
                     FPTLKNEDWKYTNVEPIAAQSFVQANGEAKSIVGAQVLSRALIETDAPRLTFVNGIYT
                     AALSNISSLPQGLRLGPLAEFIDQGDTAVAAQLGQLARPEQQHFVALNSAFLGDGVVV
                     SLAPGCRLERPIYLLFVSTSGALPVISQPRILLLLGAGSEAKIVESYLGESGKVYFCN
                     AVTELVGAEDASIEHYRLQQDSDQGFHVGTLAASLARGCHLTAHAVTLSGALVRNNVR
                     VLLNGAGAACVLNGLYLADGKQHVDNYTLIEHVSPRASSLELYKGVLGGAAHGVFNGK
                     IIVHKDAQKSDARQTNKNLLLSDTAVIDTKPQLEIHADDVKCSHGAT"
BASE COUNT          322 a          429 c          467 g          320 t
ORIGIN      
        1 ggtggagatg agtcaaaccc tgctcaaccg gccgctcaac tagggttttt ccggcggcga
       61 aaagaagcgc aatgaaattt tacaaatggc ggtgctcgat ccgacgctcg cgctgctcga
      121 tgaaaccgac tcggggttgg atatcgatgc cctgcgggtc atcgccggcg gcgtcaatgc
      181 gctgcgcagc cccaaccgcg ccatgatcgt gattacccac tatcaacggc tgctcgatta
      241 tatcgttccc gacttcattc atgttctgta caacggccgg atcgtcaagt cgggcaccaa
      301 agaactggcg ctagagctgg aaagcaaagg ttacgattgg cttaagggtg aaggtgccgc
      361 ggctcattag aacccgcgaa agcgacgttg aacatgctca gtgctgaaag caaaaaaact
      421 tatatcgccg ccttcaagca gttacgcgcg ggcggagcgc tacccggacc ggcgtggctt
      481 gaacagctgc gccaagctgg catcgccagc tttgacgcga tgggctttcc gacgctcaaa
      541 aacgaagact ggaagtatac caacgtcgag ccgatcgcgg cgcagtcctt cgttcaggcc
      601 aacggtgaag cgaaatcgat tgtcggtgcc caagtgttgt cccgggcgct gatcgaaacc
      661 gacgcgccgc ggctaacatt cgtcaatggc atttacacag cggcgctgtc caacatttca
      721 agtctgccgc agggattgcg gcttgggccg ctggcggaat tcatcgatca gggtgacacg
      781 gccgtggccg cgcagctcgg acaactggcg cgcccagagc agcaacattt tgtcgcgctc
      841 aacagtgctt ttctcggcga tggcgtggtg gtttcgttgg cgccggggtg ccgtcttgag
      901 cggccgattt atttattatt cgtttctacc tccggggccc tgccggtgat ctcccagccg
      961 cggattttgc ttttgctcgg cgccggcagc gaggcgaaga tcgtcgagag ttatttaggc
     1021 gaaagcggca aggtttattt ctgcaacgcc gtcaccgaat tggtcggcgc tgaggacgcc
     1081 agtatcgagc actaccgttt gcagcaggat agcgaccagg ggtttcatgt cggcacgctg
     1141 gcggcgagct tggcgcgagg atgtcatctg accgcccatg cggtgacctt gagcggcgcg
     1201 ctggtgcgca acaatgtccg cgtgctgttg aacggcgcgg gggcggcgtg cgtgctcaat
     1261 ggcctttatc tcgccgatgg taagcaacat gtcgacaact acactttgat cgagcatgtc
     1321 agtccgcggg cgtcgagctt ggaactgtac aagggcgtgc tcggcggcgc cgcccatggc
     1381 gtattcaacg gcaagatcat cgtccacaaa gatgcccaga agtcggacgc gcgccagacc
     1441 aacaagaatt tattgttgtc tgatactgcc gtcatcgata ccaaaccgca gttggagatt
     1501 cacgccgacg atgtgaaatg cagccatggt gcgaccat
//
LOCUS       DATIRS010000265         1922 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_709103, whole genome shotgun sequence.
ACCESSION   DATIRS010000265 DATIRS010000000
VERSION     DATIRS010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1922
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_709103"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(212..>1922)
                     /locus_tag="VLM90_03300"
     CDS             complement(212..>1922)
                     /locus_tag="VLM90_03300"
                     /inference="COORDINATES: protein motif:HMM:NF024938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HSQ12010.1"
                     /translation="GKAPLFASTIPAGFLAGPVALISQSGGLSTTIANALMLNRHVGL
                     SHIISCGNQAGATLEEYINYFVEDDNTRVIAVFAEGFKQPEKLLPVAHKAAQRNKPLI
                     ILKGGRSDVSKRAAATHSGSLAGAAEVVDAVFRQGGIVSVRSINELIDSVSVFSCDGF
                     VKKYRGGRGIGVLSGSGGECTLVSDAASNAGIEVPELTETTKAQLQEAVADFGNINNP
                     LDGTGAMFDDDRIFPRLLQGLVDDSNIDFVTINLEANDPRPKELKSGTRFSALIEKAA
                     ANSHKPIAIFSSVVGGPVDPDILLPLRNAGVPLMEGAECTTATLRNLAEYFEFQKSRQ
                     ASAATPVVTATHGKLPAGILGAEAAFRLFEEFKIPVVPTVLTSSADEAAAAADKMGYP
                     VVLKIESAQITHKSDVGGVALKLTSAAEVRGAFSRIMNQVAAKLPQAKLDGVVVQPMA
                     AEGVEMILGIKRDPLFGPVVLCGLGGILVEVLKDVAIGIPPLSIQQAKDMIQRLRGAA
                     ILGGVRGKPPADVDALCDAIVCLANLAVSLGDQLNGVDINPLIVLAKGRGVVAVDALV
                     EIQ"
BASE COUNT          362 a          557 c          595 g          408 t
ORIGIN      
        1 ggttcgccgg caataagcct ggattcccgc ctgcgcggca atgacggatg cttagtggtt
       61 gtcagtgacg gtgaattccg cttccccctt tggaaaaggg ggattgagga ggattttcct
      121 gtgcgcgtgg taaaaatccc ccctggcccc cctttttcaa aggggggaat aagcagaaga
      181 gaggtcagat ccgaaattgt aggaggcatg ctcattgaat ctccaccagg gcgtcgacgg
      241 cgaccacgcc tcggcctttg gctaacacga tcaacggatt gatgtctacg ccatttaact
      301 gatcgccgag actgaccgcc agattcgcca agcagacgat ggcgtcgcac agcgcgtcaa
      361 catcagcggg cggtttgccg cgcacgccgc cgagaatcgc ggcgccgcgc aaccgttgga
      421 tcatgtcttt tgcttgttgt atcgacagcg gcgggatgcc gatggcgaca tccttgagca
      481 cttcgacgag tatgccgcct aggccgcata gcactaccgg accgaacagc ggatcgcgct
      541 tgatgccgag gatcatctcg acgccttcag ctgccatcgg ttgaaccacg acgccgtcga
      601 gcttggcttg cggaagcttt gccgccactt gattcatgat gcgtgaaaag gcaccgcgca
      661 cttccgcggc gcttgtgagt tttagcgcca cgccgccgac atcgctcttg tgggtgatct
      721 gggctgactc gattttcaag acgacggggt aacccatttt gtccgctgcc gccgccgctt
      781 cgtcggcgct gctagtgagc accgtcggca ccacggggat tttgaattct tcgaagaggc
      841 gaaaggccgc ttcggcgccg agaattcccg ccggaagttt gccgtgagtt gctgtgacta
      901 ccggtgtcgc ggcgctcgct tgccgggatt tttgaaattc aaaatactcg gcgagattgc
      961 gcagcgtggc ggtggtgcat tcggcgcctt ccatgagcgg cactcccgcg ttacgcaaag
     1021 gtaaaagaat gtcagggtcc accgggccgc cgaccacgga gctgaagatg gcgatcggtt
     1081 tatggctatt tgccgcggcc ttctcgatga gcgcagaaaa gcgcgtgccg ctcttcagct
     1141 cctttggcct gggatcgttg gcctcaaggt tgatggtgac gaagtcgata ttgctatcgt
     1201 cgaccaagcc ctgcaacagc cttggaaaaa tcctatcgtc gtcgaacatg gcgccggtgc
     1261 cgtccagcgg attattaatg ttgccgaagt cggcgaccgc ctcttgcagc tgcgccttgg
     1321 tcgtttcagt cagctcggga acctctatgc cggcattcga tgccgcgtcg gagaccagcg
     1381 tgcactcgcc gcccgagccg ctgagcacgc cgatgccgcg gcccccgcga tatttcttga
     1441 cgaagccgtc gcaggagaaa acgctcacgc tgtcgatcag ctcgttgatg ctgcgcaccg
     1501 agacgatgcc gccctggcga aagactgcgt cgaccacttc cgccgcgccg gcgagggatc
     1561 ctgagtgagt cgcggcggcg cgtttggaaa cgtcggagcg gccgcctttc aaaataatta
     1621 gcggcttgtt gcgttgggcg gctttgtgcg ccaccggcag aagtttttcc ggttgtttga
     1681 aaccctcggc gaataccgcg atgacccggg tgttgtcgtc ttcgacaaaa taattgatgt
     1741 attcttccag cgtcgcgccc gcttgattgc cgcaggagat gatatggctg agaccgacgt
     1801 ggcggttgag catgagcgcg ttggcgatcg tcgtgctcag accgccgctc tgcgagatca
     1861 gcgccaccgg gccggcgaga aagccggcgg gaatggtcga agcgaacagc ggcgctttac
     1921 cg
//
LOCUS       DATIRS010000266         3709 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_217296, whole genome shotgun sequence.
ACCESSION   DATIRS010000266 DATIRS010000000
VERSION     DATIRS010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3709)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3709)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3709
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_217296"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..284)
                     /locus_tag="VLM90_03305"
     CDS             complement(<1..284)
                     /locus_tag="VLM90_03305"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HSQ12011.1"
                     /translation="MDGALAGIKVIEAASYVTGPFASQLLADLGAEVIKVEEPQRGDP
                     FRGWGERNYSSTFCSLNRNKKSVTLDFRSDEGRDVLLRLLTSADVFIQNFR"
     gene            complement(462..665)
                     /locus_tag="VLM90_03310"
     CDS             complement(462..665)
                     /locus_tag="VLM90_03310"
                     /inference="COORDINATES: protein motif:HMM:NF024139.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSQ12012.1"
                     /translation="MDEILTAGEVAELLQIHPRTVYKLVKQGSIPGRKFGGGWRFSRT
                     DIVAMVSPQGQPPAPRQLHTEER"
     gene            complement(984..1697)
                     /locus_tag="VLM90_03315"
     CDS             complement(984..1697)
                     /locus_tag="VLM90_03315"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ12013.1"
                     /translation="MSALLRVENLQVRYGAIEAVRGISFTLELGQIVTLLGANGAGKS
                     TTLLALSGLLNISAGSIQFDDKELRGRAPHQIVDRGLVQVAEGREILATLTVRENLLL
                     GAYRRRDQRGIDSDLVKMLELFPRLHDRLAGAAGNLSGGEQQMLAIARALMARPRLLL
                     LDEPSMGLAPLLVQEIFRTLKQLHQSGLSILLVEQNVRQALKIADYAYVMENGAIVLS
                     GRSDELLYNDQIIAAYLGG"
     gene            complement(1694..2482)
                     /locus_tag="VLM90_03320"
     CDS             complement(1694..2482)
                     /locus_tag="VLM90_03320"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ12014.1"
                     /translation="MLRLSSITKNFGGLQVLQNISLTVPERGIFGLIGPNGAGKTTVF
                     NLITGLLAPTSGTIEFRGRPLNGLAPHRITRCGIARTFQNIRIFKEMTLAENVLVAVG
                     RQDRYGVMDVLWPSARLRAAQQRERAESKELLAKVGLADKAATLAGKLSYGEQRRLEI
                     ARALATSPKLLLLDEPAAGMNGAEKQQLMEEIVKLAESGLSILIIEHDMRFVMGLCWQ
                     IAVLNFGRLIAQGTPEEIRANPAVVEAYLGEQSADDDAPAQKLL"
     gene            complement(2485..3339)
                     /locus_tag="VLM90_03325"
     CDS             complement(2485..3339)
                     /locus_tag="VLM90_03325"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSQ12015.1"
                     /translation="MEWLETFWATYSTLVLSIGTNVLLALSIYLTLACGLLTVANAAF
                     MGIGAYTAALLSLHSGMPFHLSLLLGALLPAAVALLLGPPTLRLSGVYLAMATLAFGE
                     IVRIFLLNAEGLTGGALGLNGIPQHSQWFDVALAVSAALYVLLRFAGSQIGRTLAAIC
                     QDETATELMGLNVRAYKLFAFMLGAGLAGLAGGLNAHFTFFISPNEYGFDRGVEILAM
                     GVLGGTGSPWGAVIGGVVITLLPELLRGLGDYRPLINGLILIVIILYSPKGIWDLTRY
                     LHRRAAVD"
     gene            complement(3466..>3709)
                     /locus_tag="VLM90_03330"
     CDS             complement(3466..>3709)
                     /locus_tag="VLM90_03330"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12016.1"
                     /translation="AVFPQMGQPMLHKGIAVVILGGMGDIRGALLGGFFLGCAEVFSV
                     AYIGSTMRDAVAFGLLFAILLLRPEGLFGKAAQRRA"
BASE COUNT          867 a         1149 c         1006 g          687 t
ORIGIN      
        1 cgaaagtttt gaataaacac atcggcactg gttaataacc gaagcagcac atcgcgcccc
       61 tcatcgctac gaaaatctaa tgtaacgctt ttcttatttc ggttaagact gcaaaacgtc
      121 gacgagtagt tgcgctcgcc ccagccgcga aacggatcgc cgcgctgcgg ctcttcgacc
      181 ttgattactt ccgcgcccaa atccgccagt agctgcgacg cgaacggtcc ggtgacataa
      241 ctcgccgctt cgatgacttt gatgcccgcc agtgccccat ccatggttgc cgtccttaga
      301 aacagattgg tccgtacttc ctagctgctc agcgtattgg aagcaagccg gcgcgggctg
      361 tggtgatggg gatttgaaac gctgaaataa aaaaccctcc cgttcgaagt ccgcacgact
      421 cgatccggga gggtttctta gtgaaaagtc gatctgggaa actagcgttc ttcggtgtgc
      481 agctggcgcg gcgccggtgg ttgtccttgg ggcgaaacca ttgcgacgat atcggttcgg
      541 ctaaaacgcc atcccccgcc gaacttgcgc ccaggaatcg acccctgctt gaccagcttg
      601 taaaccgtcc gcgggtggat ctgtagcagc tcagctactt cgcccgcggt caaaatttca
      661 tccatcgata ctcctccttc ccttggaatc aaaattctag ggacaacatt aggcagaaac
      721 catgccacaa acaccctgct ggtttctcgg gacagaagcg gccagtcgcg caaccatcgg
      781 acaaaccggg aaaatcgcag caaccacaaa gcgcacaaac agcgatgttc ggcgcaatta
      841 ggaacaaacc tgtaagttct ccgcccgtcg ccggaaaccc gctggcttcc cttcagactc
      901 ctgcaactac gacaactgcc gcgagtgcgt tgtgtagtgt tttccaacag tgatgtgatg
      961 taagccagcg tggcgaggcg atactaaccg ccgagatagg ctgcgatgat ctggtcgttg
     1021 tacagcagct catcgctgcg ccccgacaag acaatcgcac cgttctccat gacgtaagcg
     1081 tagtcggcga tcttgagcgc ttggcggaca ttctgctcca ccagcaagat cgacaaaccg
     1141 ctttgatgca gctgcttcaa agtccgaaag atttcctgaa ctagcagtgg cgccaaaccc
     1201 atcgacggct catccaacag caacaagcgc ggccgcgcca tcaacgcgcg ggcgatagcg
     1261 agcatctgct gctcgccgcc ggagagattg ccggcggcac ccgcaagccg gtcatgcaag
     1321 cgcgggaaca gctcgagcat ttttaccaag tcgctgtcga tgccacgctg atctcgtcgc
     1381 cgataggcgc cgagaagcaa attctcgcgg accgtaagcg tagcgagaat ctcgcgccct
     1441 tcggcgactt ggaccagccc acgatcgacg atctggtgcg gcgcccggcc gcgcaactcc
     1501 ttgtcgtcga attggatcga gccggcgctg atattgagca gccccgagag cgccagcagc
     1561 gtcgtcgact tgcccgcgcc attggcgcct agcaaggtga cgatctgtcc aagctcaaga
     1621 gtgaaactga tgcctctgac cgcttcgatg gcaccataac gcacctgcaa attttcaacg
     1681 cgaagtaacg cgctcataac aatttctgcg ccggcgcgtc atcgtcggcg ctctgttcgc
     1741 ccaaataagc ttcgacgacc gcgggattgg cgcgaatctc ttccggtgtg ccctgggcga
     1801 tcagccggcc gaaattgagc accgcgatct gccagcacaa tcccatgaca aagcgcatgt
     1861 catgttcgat gatcaaaatg ctcaagccgc tctctgccaa tttgacgatc tcttccatga
     1921 gctgctgctt ctccgctcca ttcatccccg ccgccggctc gtcgagcagc aaaagcttgg
     1981 gtgacgtggc cagcgccctg gcgatttcca aacggcgctg ttcgccatag gaaagtttgc
     2041 cggccaaggt agccgctttg tccgcaagac cgaccttggc taacagctcc ttagactcgg
     2101 ctcgttcccg ttgctgcgct gcccgcaagc gcgccgacgg ccagagaacg tccatgacgc
     2161 cgtagcgatc ctgccgcccg acggcgacca agacattttc ggccaaagtc atctccttga
     2221 aaatgcgaat attttgaaag gtgcgggcaa tgccgcaacg ggtaattcga tgcggtgcta
     2281 atccgtttaa cggtcggccg cggaactcga tggtgccgct ggtcggcgcc agtaaaccgg
     2341 tgatcaaatt gaacaccgtg gtcttgcccg cgccgtttgg accgatcagg ccaaagatgc
     2401 cacgctcggg aacggtcagg ctgatattct gcaacacctg caaaccgcca aagttctttg
     2461 tgatggatga caagcgcagc atgactaatc gaccgcggcg cgccgatgca gatagcgcgt
     2521 gagatcccag atacccttgg gcgagtaaag aatgatcacg atcaaaatca atccgttaat
     2581 cagcggccgg taatcgccga ggccgcgcag caactccggc agcagtgtaa tcaccacacc
     2641 gccgatcacc gcgccccagg ggctgccggt gccgccgagc acacccatcg ccaagatttc
     2701 aacgccgcgg tcgaaaccgt actcattagg actgatgaaa aaagtaaaat gggcattcaa
     2761 cccgcccgcc agaccggcca accccgcgcc gagcatgaag gcgaagagtt tgtaggcgcg
     2821 cacgttgagc cccatcagct cggtggcagt ttcatcctgg cagatcgccg ccagagtgcg
     2881 gccgatctgc gagccggcga agcgcagcag cacgtacaaa gccgcgctca ccgccagcgc
     2941 aacgtcgaac cattggctgt gctgcgggat accgttcaac cctaacgcac cgccagtcaa
     3001 accttcggcg ttgagcaaaa atatccgcac gatctcaccg aaggcgagcg tcgccatcgc
     3061 caaataaact cccgacagcc gcagcgtcgg cggaccgagc aacaacgcca ccgccgccgg
     3121 cagcaatgcc cccaacagca acgataaatg aaaaggcata ccgctatgca agctaaggag
     3181 cgccgcggtg taagcgccga tacccatgaa cgcggcgttg gcgacggtca agagcccaca
     3241 ggcgagggtc agatagatcg acaacgccaa cagcacgttg gtgccgatgg aaagcaccaa
     3301 cgtgctataa gtcgcccaaa aagtttcgag ccattccatg tcgttgagct aaagtcacta
     3361 gttgaactcc gtatcgcagc ttgacgaatt ctgcactccg aacttgagct ttgagccttg
     3421 agccttgaac gttgaacgtt gaacctcgcc catagggcgt tccgatcagg cgcgccgctg
     3481 ggcggctttg ccgaacaagc cctcgggtcg gagtaacagg atagcgaaca gcaggccgaa
     3541 ggcgactgcg tcacgcatgg tcgagccgat ataagccacg gaaaaaactt cggcacagcc
     3601 aagaaagaaa ccgccgagca gggcgccgcg tatatcgccc atgccgccga ggatgaccac
     3661 cgcgatgcct ttgtgcagca tcggttggcc catctgggga aacaccgcg
//
LOCUS       DATIRS010000267         1597 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_709191, whole genome shotgun sequence.
ACCESSION   DATIRS010000267 DATIRS010000000
VERSION     DATIRS010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1597)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1597)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1597
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_709191"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1029
                     /locus_tag="VLM90_03335"
     CDS             <1..1029
                     /locus_tag="VLM90_03335"
                     /inference="COORDINATES: protein motif:HMM:NF026220.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YCF48-related protein"
                     /protein_id="HSQ12017.1"
                     /translation="GTQHGLITWRSTNNGWEEVARHFEDGIIDSIHGCKQSPERVFVG
                     VTHDGLYRTNDGGKSWAKVLDGDIRSVTVDPTDDKIVYSGVEPVALFRSEDGGDSWQE
                     IAALKTLPQSVRKNWWYPQAPHHGHVRNIHIHADDPNTIYLCLEHGGIVRSFDRGKTW
                     EDVSKGIDYLDIHVISNLPKRKDRYYVASARGFFTSDKPEDGWMRAENGLTRDYFHDF
                     IFLPPERDTEQPTMLIATADASPGFWRRENRGARAAMFKSTDGAQSWTRITDGLADDL
                     DSMIWALVHHPTDHRAVFAGFGNVARGHASGAGGAGDLMISRDTGDSWQRLDIDLPAD
                     RVLWAAAD"
     gene            1154..>1597
                     /locus_tag="VLM90_03340"
     CDS             1154..>1597
                     /locus_tag="VLM90_03340"
                     /inference="COORDINATES: protein motif:HMM:NF014750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016625 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, iron-sulfur
                     protein as acceptor [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde ferredoxin oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HSQ12018.1"
                     /translation="MANRDYRNFFPSARQTRLPGGYMGKILRVDMTTGKITDLNLPEE
                     PVLRKYWGGQLFAEYVLLNELPFGIDPYDANNVIVGMTGPITGTGFTPGGTKMCFVYL
                     SPATRHTLGRGATSGYFGTSLKAAGYDGVIVSGAAQSPKYLYIGED"
BASE COUNT          345 a          480 c          461 g          311 t
ORIGIN      
        1 ggcacgcagc acggcctgat cacttggcgc tcgacgaaca acggctggga agaagtcgcg
       61 cgccacttcg aagacggcat catcgactcc attcatggtt gcaagcaatc accggagcgg
      121 gtcttcgtcg gcgtcactca cgacggcctc tatcgtacta acgacggcgg caagagctgg
      181 gccaaagtgc tcgatggcga cattcgttcg gtgacggtcg acccgacgga cgataaaatc
      241 gtttactcgg gcgttgagcc cgtggccttg tttcgaagtg aagacggcgg cgacagctgg
      301 caagaaatcg cggcattgaa aaccttgccg cagtcggttc ggaagaactg gtggtatccc
      361 caggcgccgc accacggcca cgtgcgtaat attcatattc acgcggacga tcctaacacg
      421 atctacttat gtctcgaaca cggcggtatc gtgcgcagct tcgaccgcgg caagacctgg
      481 gaagacgtga gcaagggtat cgattatctc gatatccacg tcatttccaa cttgccgaag
      541 cgcaaggatc gctactacgt cgccagcgcg cgcggctttt ttaccagcga caagccggaa
      601 gacggttgga tgcgcgccga gaacggcctc acgcgcgact actttcatga ctttattttc
      661 ttgccgcccg agcgtgacac cgagcaaccg accatgctca tcgcgaccgc ggatgcttcg
      721 ccaggctttt ggcgccgaga gaatcgcggc gcccgcgcgg ccatgttcaa aagcaccgac
      781 ggcgcgcaat cctggacgcg catcacagac gggctcgcgg atgatctcga ctcaatgatc
      841 tgggccttgg tccaccatcc gaccgatcac cgcgccgtct tcgccggctt cggcaacgtc
      901 gcgcgcggcc acgcctcggg cgccggcggc gccggcgatc tgatgatcag ccgcgacacg
      961 ggcgacagct ggcaaagatt ggatatcgat ttacccgcgg accgggtcct ttgggcggcg
     1021 gcggattgag cgaacacaca gtcttcgcgt tccaaccgtt tcaatagttc caatcgttcc
     1081 attagttcga acctttggaa cgactgaaac gtctggaacg attggaacga cttagtttaa
     1141 ccgaggcatg atcatggcaa atcgcgacta ccgcaatttt tttccgagcg cccggcaaac
     1201 aagactcccc ggcggctaca tggggaaaat tctgcgtgtc gacatgacga cgggcaagat
     1261 taccgatcta aatctccctg aagagccggt gctgcgcaaa tactggggcg gtcagctatt
     1321 cgcggaatat gtgctcttga atgaattacc gttcggcatc gatccttacg acgctaataa
     1381 cgtcatagtc ggcatgacgg ggccgatcac cggaaccggc ttcacaccgg gcggaaccaa
     1441 gatgtgtttc gtctatctca gtcccgcgac gcggcacacc cttggccgcg gcgccaccag
     1501 cggttacttc ggcacgtcgc tcaaagccgc gggctatgac ggtgtgatcg tcagcggcgc
     1561 ggcgcaatcg ccgaagtatc tttacatagg cgaagac
//
LOCUS       DATIRS010000268         1528 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1790617, whole genome shotgun sequence.
ACCESSION   DATIRS010000268 DATIRS010000000
VERSION     DATIRS010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1528
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1790617"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..759
                     /locus_tag="VLM90_03345"
     CDS             <1..759
                     /locus_tag="VLM90_03345"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HSQ12019.1"
                     /translation="VDSRNLMLEARMIKNQDEIDCLKTCASMVDGVWYRVWENLKPGI
                     RDTDLMRIASGAGWEMGLEGSVPGGWRTGPTTFDRGPHATSRVIQFGDMVYGSYCGAT
                     YMGYGSCTYRTFIVGRKPTAKEQDWYKEVRERLDLVISEIKPGKTTADAAKHFPPATK
                     WGYQSEVEILASEIGHGIGLGTNTGYDIPIINRLWSFDHPQVFEEGMTLAVESREGAT
                     RVGGARLENMLVVTKNGAEIMDYFPRDEILIAPR"
     gene            1011..>1528
                     /locus_tag="VLM90_03350"
     CDS             1011..>1528
                     /locus_tag="VLM90_03350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12020.1"
                     /translation="MACLRSLTIKASEPARLADFYRAVFELETVSEAPNSIRLSDGVF
                     TLALLKENDGSLTGLHATGFLVDSLESVQLKAEEGGAPSPHGEFQVTDPDNNLIDISN
                     RSFGTSTTKTPFPIRHLALFTADPRRLADFYAAAFGLKPVGSTDRGSIFVSDGYFNQA
                     LLYQRVREEKNG"
BASE COUNT          322 a          430 c          459 g          317 t
ORIGIN      
        1 gtcgattcgc gcaacctcat gctcgaagcg cgcatgatca agaaccagga cgagatcgat
       61 tgtctcaaga cctgtgcgtc gatggtcgac ggcgtctggt atcgcgtctg ggaaaatttg
      121 aagccgggta ttcgcgatac cgatctgatg cgcatcgcct ccggcgccgg ctgggagatg
      181 ggactggaag gttccgtgcc cggcggctgg cgcaccgggc cgacgacttt cgatcgtgga
      241 ccgcatgcca ccagccgggt gattcagttc ggcgacatgg tttacggttc ttactgcggc
      301 gcgacttaca tgggctacgg cagctgcacc taccggactt tcatcgtcgg cagaaagccg
      361 acggcgaagg agcaagattg gtataaagaa gtgcgcgagc ggctcgatct ggtcatctcc
      421 gaaatcaaac cgggcaagac caccgcggac gcggccaaac atttcccgcc ggcaaccaag
      481 tggggttacc agagcgaagt ggaaatcctc gccagcgaaa tcggccacgg catcggcctg
      541 ggcaccaaca ctggctacga tattccgatc atcaatcgct tatggtcctt cgatcatccg
      601 caggttttcg aggaaggcat gacgctggcg gtggaatcgc gcgaaggcgc gaccagagtc
      661 ggcggcgcgc gcttggaaaa catgctggtg gtgaccaaga acggtgccga gatcatggat
      721 tactttccgc gggatgagat tttaatcgcg ccgcgatgac gggaattgtt tagccgcgag
      781 cgcgcgtgaa ttcgcaggaa ttagaatcaa gccgcgacga attcccggat tcaacaatcg
      841 attgacgcgg caagcagact gtttctgtct ctccggtcga ccaagtcctc agactcattg
      901 ccctttcgat tccattcgcg gccatccaga acggccgcgc aaccgctggc atgaaattgg
      961 ctggatggtt tcctgcaatg catcgcaaac gttttccgct ggaggttccg atggcatgtc
     1021 tgcgcagtct cacgatcaaa gcgagcgaac cggcacgatt ggcggatttt taccgcgcgg
     1081 ttttcgaact ggaaacggtt tccgaggcgc cgaactcgat tcgtttgtca gacggtgtgt
     1141 ttaccttggc tttgctcaag gaaaatgatg ggtcgctcac cggactccac gctaccggct
     1201 tccttgtcga tagcctggaa agtgtgcagc tgaaagctga ggagggcggc gcgccgtcgc
     1261 cgcacggtga gtttcaagtg acggatccgg acaacaatct aatcgatatt tcgaaccgca
     1321 gctttggtac atcgacaacg aagacgccgt tcccgatccg ccatctggcg ctattcaccg
     1381 ccgatccacg gcggctggcc gacttctatg cagcggcgtt cggtttgaag ccggtcggca
     1441 gcaccgaccg cggctcgatc tttgtttccg acggctactt caatcaggcg ctgctctacc
     1501 agcgcgtgcg cgaggagaag aacggctt
//
LOCUS       DATIRS010000269         2505 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_905753, whole genome shotgun sequence.
ACCESSION   DATIRS010000269 DATIRS010000000
VERSION     DATIRS010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2505
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_905753"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..520
                     /locus_tag="VLM90_03355"
     CDS             <1..520
                     /locus_tag="VLM90_03355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12021.1"
                     /translation="KFFSREGKYFTEYYGGILHSNFIPDIRKINLVAREKRGKGTKNM
                     YIHMSGGSMLAHVSEFPVGRYKKAHRHGPGAHVFLLDSTGYTMMWREGETPRRYDWHE
                     GTVISPPAGWWHQHYNTGAQPCKFVALHANTAVQGEEQGVEQIEFEEGDEAMRKLFAD
                     ECAKNGVKADMG"
     gene            812..1249
                     /locus_tag="VLM90_03360"
     CDS             812..1249
                     /locus_tag="VLM90_03360"
                     /inference="COORDINATES: protein motif:HMM:NF016001.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family deazaflavin-dependent
                     oxidoreductase"
                     /protein_id="HSQ12022.1"
                     /translation="MPEYIPSPRDWVREQVELYERTNGAEGNTLRDTGLPVIIVTHMG
                     NKTGAVRKTPLMRVKDGTNYVLVGSTGGAPKDPVWVYNLRANPLVELRDLAVVRKMRV
                     REVADAAERERLWKAAVAAYPPYSEYQTRTTRVIPIFVAEPVS"
     gene            complement(1461..2450)
                     /locus_tag="VLM90_03365"
     CDS             complement(1461..2450)
                     /locus_tag="VLM90_03365"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12023.1"
                     /translation="MFVTRMALVAMLLSIGGLTNPAFCATTLTPMRLLYPSFAGSWAT
                     AWIAKEAGYFSAEGLDVELVRVGGSSRMVAAMLGGSAPIIQAGAIAALTANVAGADVV
                     IIGSTGTVSPFRLIARPEIKQPSDLKGKKAGITTFGSTSDQVMRIAFKQFNLDPSKDV
                     ALLTFGAQPEAFAALMNGIVQVAALSYPLYPKAIKSGMRELVNFADLGVEDINGTVMT
                     TRAFVAQQRDTALRFMRAFTRGMQRYRTDKEFSKKVLGKYGKITDEEALEGTWQDYAL
                     TLQKTPRPSLKAIQFMIENQYPDKKPLPKPEQFVDLTLVNQLEKSGFFDSVNR"
BASE COUNT          511 a          706 c          769 g          519 t
ORIGIN      
        1 gaagttcttt tctcgagaag gaaaatattt caccgagtat tacggcggca ttctgcactc
       61 gaatttcatt ccggacatcc gcaagatcaa tctcgtggct cgcgaaaagc gcggcaaagg
      121 cacgaagaac atgtatatcc acatgtccgg cgggtcgatg ctggcccacg tgtcggaatt
      181 tcccgtgggg cgctacaaga aagcccaccg ccacggaccg ggcgcccacg tctttctgct
      241 cgattcgacc ggttatacga tgatgtggcg cgaaggcgag acgccgcggc gctacgattg
      301 gcatgaaggg accgtaatct ccccgccggc gggctggtgg caccaacatt ataataccgg
      361 cgcccagccc tgtaagtttg tcgcgcttca cgccaacacg gcggtgcaag gtgaagagca
      421 gggggtggag caaatcgaat tcgaagaagg cgatgaagcg atgcgcaagc ttttcgcgga
      481 cgaatgcgcg aagaacggcg tcaaggcgga catgggttag tctttcgagt ttcgggtttg
      541 gagtttcaga tcggagaact tcaatcgcgg caatttcgac gccatgatct agagccatga
      601 gagcggcttg ctcgccaaaa tttaggattg cgtaaacgcc ccgctcgcac ggcgcctagc
      661 atgtatgatt gcagacacga ccccaacgct gatgctcttc atctgcgagg tagatggaat
      721 cgcaactttt agcaaaccct agcggccggg ccgcgggtgt ttgagaacaa tcggcggcca
      781 agccgagtaa ccctatcgag gagacaagcc aatgcctgaa tacatcccga gcccgagaga
      841 ttgggtgcgc gagcaggttg agctctacga gcgtacaaac ggggccgaag gcaacaccct
      901 gcgcgacacc ggattgccgg tcatcatcgt cactcacatg ggcaacaaga ccggagccgt
      961 tcgcaagacg ccgctgatgc gtgtcaagga cggcaccaac tatgtgctgg tcgggtcgac
     1021 gggcggagca cccaaggatc cggtttgggt ctacaacctg cgcgccaatc cgctggtgga
     1081 gcttcgcgat ctggcagtgg tgcggaagat gcgggtgcgc gaggtcgccg acgcggcgga
     1141 gcgagaacgc ctgtggaaag ccgccgtggc ggcctatccg ccgtattcgg agtatcaaac
     1201 tcgaacgacc agagtgattc caatcttcgt ggcggagccg gtgagctagc gctcgccctt
     1261 cgtcttcccg aaggttcgcg aaatgcactg aggtgattgc ttctgcggca gcgtcgctac
     1321 gagtccagcg atgtttgtcc gactgacttt accccggagc ggctttgaac tcgtccaaga
     1381 aactgtttag atatcccggc acgacccaga gcacagccct gacgctgcgg ccgtcccgag
     1441 acgcttacga gccgctgtcc ctaccgattg accgaatcga agaagccgct cttttcgagc
     1501 tgattgacca gcgttagatc gacaaactgc tcgggcttgg gcagcggctt cttgtccggg
     1561 tattgattct cgatcatgaa ctggatggct ttcagcgacg gccgcggcgt cttttgtaac
     1621 gtcagcgcgt agtcctgcca ggttccttcc agagcttcct cgtcggtgat cttgccgtat
     1681 ttgcccagca cttttttgct gaattctttg tcggtgcgat agcgctgcat gccgcgcgtg
     1741 aaggcgcgca tgaagcgcag tgccgtgtcg cgttgctggg cgacgaaagc acgcgtcgtc
     1801 atcacggtgc cgttgatgtc ctcgacaccg agatcggcga aattgaccag ctcgcgcatg
     1861 ccgcttttta tcgcctttgg ataaagtgga tagctgaggg cggcgacttg cacgatgccg
     1921 ttcatcaacg cagcgaacgc ctccggttgc gcgccgaagg tgagcagcgc gacatctttg
     1981 ctggggtcga gattgaactg cttgaacgcg atgcgcatga cttgatcgga agtcgagccg
     2041 aaagttgtga tgccggcttt tttgcctttc aagtcggacg gctgcttgat ctccgggcgc
     2101 gcgattagac ggaagggcga gaccgtaccc gtagaaccga tgatcacgac gtcggcgccg
     2161 gcgacattgg cggtgagcgc cgcaatggcg ccggcctgaa tgatcggcgc gctgccgcca
     2221 agcatcgccg caaccattcg gctgctgccg ccgacgcgga cgagttcgac gtcgagccct
     2281 tcggcactga agtatccggc ttccttggcg atccacgccg tcgcccagct gccggcgaag
     2341 ctcgggtaga gcaagcgcat gggcgtcaga gttgtagcgc agaatgccgg gttcgttagg
     2401 ccgccgatac ttaggagcat ggcgaccagc gccattcttg taacgaacat ggttcctcct
     2461 ggatttgttt actcttggcg ttggcttcta tggtcaaccc attgt
//
LOCUS       DATIRS010000270         1583 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_118731, whole genome shotgun sequence.
ACCESSION   DATIRS010000270 DATIRS010000000
VERSION     DATIRS010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1583
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118731"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            49..747
                     /gene="ispD"
                     /locus_tag="VLM90_03370"
     CDS             49..747
                     /gene="ispD"
                     /locus_tag="VLM90_03370"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: protein motif:HMM:NF013308.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050518 - 2-C-methyl-D-erythritol
                     4-phosphate cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HSQ12024.1"
                     /translation="MHVTAIIVAAGAGRRIGGATAKTYLPIAGRPLILRTLDRIFASP
                     AVSDIVLVVAPADLGYCRELLDADASLMGRAYDLQAGGATRQQSVRCGLEKLATATDM
                     VMIHDGARPFVSSALIERCIQAAAVKGAAVVGLPVRDTIKQVGADGYVRSTPERAGLW
                     EIQTPQIFQRDLIVAAHEWAAREGIDATDDAMVVERMGKPVFVVEGERNNFKITVPED
                     LQLAEAMIRAGIVA"
     gene            complement(744..1556)
                     /gene="larE"
                     /locus_tag="VLM90_03375"
     CDS             complement(744..1556)
                     /gene="larE"
                     /locus_tag="VLM90_03375"
                     /inference="COORDINATES: protein motif:HMM:TIGR00268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent sacrificial sulfur transferase
                     LarE"
                     /protein_id="HSQ12025.1"
                     /translation="MDAKFTRLTEILSQSDAILVAFSAGVDSTFLLKAAHLALGDGVV
                     ALTASSASVPPGELDAAKSFAASLGCRHIVLDSHEIDNPAYAQNPVNRCFFCKDELYR
                     ICREQADKLGLATIVDGTNLDDLKDHRPGLQAADQWRIRHPLVEAGLTKDDIRSYSRE
                     LALPTWDKPSSPCLSSRFPYGTSIDLEKLKKVGACEVFLKGLGFREFRVRYHADLARI
                     EVNQNEMDRLFDKPIRDAIVKRFKEVGFSFVSLDLQGFRSGSLNEGLKAPAH"
BASE COUNT          305 a          427 c          505 g          346 t
ORIGIN      
        1 tctaagagcc gagagcttat ctctcggctc ttttgttttg gagcgccgat gcatgtcact
       61 gcgattatcg ttgccgccgg tgccggccgc cgaatcggcg gcgccacggc caaaacctat
      121 ctgccgatag cgggccggcc gctgatcctg cggacgctgg atcgaatctt tgcatcgccg
      181 gcagtttcgg acatcgtctt ggtcgtggcg ccggcggatc tcggctattg tcgggagctc
      241 ttggacgccg atgcatcctt gatgggacgc gcttacgatc ttcaggccgg cggggcgacg
      301 cgtcagcaat cggtccgatg cggcctggag aagctcgcta ccgccacgga catggtgatg
      361 atccacgacg gcgcgcgacc gtttgtttct tctgcgctta tcgagcgttg catccaagcg
      421 gcggcggtga agggtgcggc ggtggttggg ttgccggtgc gcgataccat caagcaagtt
      481 ggcgcagacg gttacgttcg aagcacgccc gagagggccg gcttgtggga aatccagacg
      541 ccgcaaattt ttcagcggga tctcatcgtc gcggcccatg aatgggcggc gcgggaaggg
      601 atcgatgcga ccgatgacgc catggtggtg gaacgcatgg gtaagccggt cttcgtcgtc
      661 gaaggggagc gtaataattt taagataacg gtgccggaag atttgcagtt ggcggaggcg
      721 atgatccgcg ccggtatcgt cgcttaatgc gccggcgctt tgagtccttc gtttaagctg
      781 ccgctgcgaa agccctgcag gtcgagactg acgaaactaa agcccacttc tttgaaacgt
      841 ttgacgatgg cgtcgcggat cggcttgtcg aagagccggt ccatttcatt ttggttgact
      901 tctattctcg ccagatcggc gtgataacgc acgcgaaatt ctctaaaacc cagccctttc
      961 aaaaatactt cgcaggcgcc gaccttctta agcttctcga gatcgatgga tgtgccgtag
     1021 ggaaagcgtg acgacagaca agggctagat ggtttgtccc aggtcggtaa agccagttcg
     1081 cggctgtagc tgcgaatgtc gtctttggtc aggccggctt cgacgagcgg gtggcgaatg
     1141 cgccattgat ccgcggcttg caatcccggt cgatgatctt tgagatcgtc gaggttggtg
     1201 ccgtcgacga tcgtcgccag cccgagcttg tccgcttgct cgcggcaaat gcgatagagc
     1261 tcgtccttgc agaaaaaaca ccgattgacc ggattttgcg cgtaggcagg attgtcgatc
     1321 tcgtgcgagt cgaggacgat atggcggcag cccaagctgg cggcgaaact ttttgccgcg
     1381 tcgagttccc ccggcggaac cgacgcagac gaggcggtga gcgcaaccac gccgtcgccc
     1441 aacgcgagat gcgctgcttt caacaaaaac gtcgaatcga cgccggcgga aaacgccacc
     1501 aagattgcat ccgattggct gaggatctcg gtcaggcggg tgaactttgc gtccattttt
     1561 tatcgctgaa aagatcggtg ctg
//
LOCUS       DATIRS010000271         3445 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1594030, whole genome shotgun sequence.
ACCESSION   DATIRS010000271 DATIRS010000000
VERSION     DATIRS010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3445
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1594030"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(8..1081)
                     /locus_tag="VLM90_03380"
     CDS             complement(8..1081)
                     /locus_tag="VLM90_03380"
                     /inference="COORDINATES: protein motif:HMM:NF014653.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HSQ12026.1"
                     /translation="MATDATGMTRINHEKLIRFVSRSFEKLGVPTADAEIAANVLVAS
                     DLRGVDTHGVIRFNPHAWYVKWLRDGAMTAKPNIRVVTENASTALLDADNGMGFVAGH
                     RAMGLAINKAKESGVGIVTVRNSRHYGMSAYYSMLALPHDMIGIAMTNASRQVVPTFG
                     REARFGTNPISFAVPAKDEKPFVLDMATTTAAAGKLELAIRLGKPVPTGWALNEKAEP
                     TTDPKVAQQARRLLPLGGSRESGSHKGYGLGILVEILCGVLTGTVTALNANQEPRGHF
                     FGAINPAAFRPAAEFTADMDRLIRELKSTPPVEGESRVYVAGEIEFETAEERAERGIP
                     LHGSVLKGLREVSEQVGVPYDLE"
     gene            1233..2264
                     /locus_tag="VLM90_03385"
     CDS             1233..2264
                     /locus_tag="VLM90_03385"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12027.1"
                     /translation="MKLFDAPLRLTLKAVCCALIAVVEVANIGAAELPMVRIAHGAFS
                     EKVVALWLGNEQGLFRKHGVNVEVINIRSGPQTMAALVSGDIQVAYTIPGSVVSAATG
                     GLDVAFFAGIVNKADGDFIAGTSIRGAEDLKGKRIGVQSIGGGVWSMAMLAIEHLGLE
                     PNRDKMTIMVIGDSPVLAQSLESGGIEATYLNYTHSRALKEKGLPVLLDLGKAPIPYQ
                     GLAAATRRGYLKQNPQIVDSLMRGFVETVVFIHKPGNKEIVIKSLVKNLRLRSSQDAE
                     IGYAALQWLYNLDIKPTIPGIQNMARFLALSNPKVKTVKSEDVVDEAPWQRLEKSPFY
                     REVLAAAKK"
     gene            complement(2309..3310)
                     /locus_tag="VLM90_03390"
     CDS             complement(2309..3310)
                     /locus_tag="VLM90_03390"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ12028.1"
                     /translation="MTAKILLLLASFLPTIAWAQSVELVNQAKKEGGEVILYTTMTVG
                     DFEHFSKAFKEKYPGLNLRHVYLSSSRQSARVMQEFRAGRVQGDVLGNSPEPLLYLKQ
                     QGVLGQYRSAETKNLLSGAWDNDGFWSGITTDLLVTGFNPRLLAKSAVPKNYDDYLRP
                     QYKSQIAVNRGVPYPLTGMVSLRGDEQGTAYFKKLSQQDLRLVEGYSHTINMMAAGEY
                     PLTGFMQVSKLEAMKRKEAPVDWLPATQTLATISTIAMVKNPLHPAAAQLLIDFYLSP
                     EGQRALAAAGKIPLRKGVRSQSKEIDQLMEGGNAHVIRAEGSYDKYMKVYNEYLGIR"
BASE COUNT          724 a         1017 c          937 g          767 t
ORIGIN      
        1 cgggcgctta ttccaaatca tacggcacgc caacctgctc gctcacttct ctcaatccct
       61 tgagcaccga accgtgcagc ggtataccgc gttccgctct ttcctcggcg gtttcaaact
      121 caatttcccc agccacgtag actcggctct cgccttcgac cggcggcgtc gattttaact
      181 cgcggatcag ccggtccatg tcggctgtga attccgcggc tgggcgaaat gccgctgggt
      241 taatcgcgcc gaaaaagtgg ccgcgcggtt cttggttggc attcagagcc gtgaccgtgc
      301 cggtgagcac gccacagaga atttccacga ggattcctaa accgtagcct ttatgactgc
      361 cgctctcgcg cgatccgccg agcggcagca aacgacgcgc ttgctgcgcc actttgggat
      421 ccgtcgtcgg ttcggctttt tcgttcaatg cccagcccgt cggaaccggc ttgcccaggc
      481 gaatcgccaa ttccaatttt ccggccgccg cggtggtggt cgccatgtcg aggacgaaag
      541 gtttttcgtc ttttgccggc acggcgaagc tgatcggatt ggtgccgaag cgcgcttcgc
      601 ggccaaaggt cggtaccact tgccggctcg cgttggtcat ggcgatgccg atcatgtcat
      661 gcggcaacgc gagcatggaa taataggccg acatgccgta gtgccggcta ttacgaaccg
      721 tgacgatgcc gacacccgac tctttggcct tgttaatcgc cagccccatc gcccggtggc
      781 cggcgacgaa gcccatgcca ttgtcggcat cgagcagcgc ggtggacgca ttctccgtga
      841 cgacgcgaat attcggcttc gccgtcatcg cgccatcgcg cagccacttc acataccaag
      901 catgcgggtt gaagcgaatc acgccatggg tatcgacgcc gcgcaaatcg gatgccacca
      961 ggacattggc ggcgatctcg gcgtcggccg tcggcacacc gagtttttca aatgaacggc
     1021 tgacgaagcg aatcagtttc tcatgattga tacgggtcat accggttgca tcagtggcca
     1081 tgaaatcctc ccagagatta cctgcgcaca cctatctttg atcttgttcc tctgtcaacc
     1141 ccgcttgacg ctccaaccgt gtttccctat gttacccata gccgaagact ctcgacttgg
     1201 acactgtcag ccatctcagg agatttctga tgatgaaatt gttcgatgcg ccattgcggc
     1261 tgactctcaa agctgtctgc tgcgctctaa tcgccgtcgt agaggtcgcc aatatcggcg
     1321 ccgccgaact gcccatggtg cgcatcgccc acggcgcttt cagtgaaaaa gtcgtcgcat
     1381 tatggctagg caatgaacaa ggtctgtttc gcaagcatgg cgtcaacgtc gaggtcatca
     1441 acatccgcag cggcccgcag accatggcgg cgctggtttc cggcgacatc caagtcgcct
     1501 acaccattcc tggatcggtc gtcagcgccg caaccggcgg tttagacgtc gcgttcttcg
     1561 ccggcatcgt caacaaagcc gacggcgatt tcattgccgg gacgagcatt cgcggcgccg
     1621 aggatttaaa aggcaaacgg atcggtgtgc agagcatcgg cggcggcgtc tggtcgatgg
     1681 cgatgctcgc catcgagcat ctcggtttgg aaccgaatcg agataaaatg acgatcatgg
     1741 ttatcggcga ctcgccggtg ctggcgcaat cgctggaatc cggcggcatc gaagcgacct
     1801 atctcaatta cacccacagc cgggcactga aagagaaggg ccttccggtc ctactcgact
     1861 tgggcaaggc gccgattccc tatcaaggac tcgcggcggc gacccggcgc ggctatctca
     1921 agcaaaatcc ccagatcgtc gattcgctga tgcgcggctt tgtcgaaacc gtggtgttta
     1981 ttcacaagcc gggaaacaag gaaatcgtca tcaagtccct ggttaaaaat cttcgcttaa
     2041 gaagcagcca agacgcggag atcggctacg cggcgctgca atggttgtac aacctcgata
     2101 tcaagccaac catccctggc attcaaaaca tggcgcgctt cctcgccctg tcgaatccca
     2161 aagtaaaaac cgtgaaaagc gaagacgtgg tcgacgaagc accctggcaa cgtttggaaa
     2221 aaagcccgtt ctatcgggaa gtgctggccg ctgctaaaaa gtagcgcgtg gcctagtcga
     2281 tcaacccgca gaaccagcta ttgcgagatt acctgatccc cagatactcg ttgtaaacct
     2341 tcatgtactt gtcgtagctg ccctcggcgc ggatgacatg tgcgttaccg ccttccatga
     2401 gctgatcgat ttccttggac tgactcctga ccccttttct gaggggaatt tttcccgccg
     2461 ctgctaaggc tcgttgccct tcaggagaga gatagaaatc gatgaggagt tgcgccgccg
     2521 cagggtgtag aggatttttc accatggcta tggtggaaat agtcgccagg gtctgcgtcg
     2581 cgggtagcca atccaccggc gcctctttgc gtttcatcgc ttcgagtttg gagacctgca
     2641 tgaaaccggt gagcgggtat tcgcccgcgg ccatcatgtt gatcgtgtgg ctatagcctt
     2701 cgactaacct taagtcctgc tggctgagtt ttttgaaata agccgtgccc tgctcgtcac
     2761 cgcgcagcga taccataccg gtcagtgggt agggcacacc gcggttaacg gcgatttgac
     2821 tcttgtactg cggccgcaag taatcgtcat aatttttcgg caccgcggac ttcgcaagta
     2881 gccggggatt gaagccggtg acgagcaaat cggtggttat gccggaccag aaaccgtcat
     2941 tgtcccacgc gcctgacagc agattcttgg tttccgccga gcgatactgg cccagcacgc
     3001 cctgttgctt aagataaagc agcggctcgg ggctattgcc caaaacatcg ccctggacgc
     3061 ggccggcgcg aaactcttgc atcacccgcg ccgattgccg cgatgaactg agataaacat
     3121 gacggagatt gaggccggga tatttttctt taaaagcctt gctgaaatgc tcgaagtcgc
     3181 ccacggtcat ggtcgtgtag agaataacct cgccgccttc cttcttcgcc tgattcacca
     3241 gctcgaccga ctgcgcccaa gctatggtcg gcaagaaact agccagcaac aataaaattt
     3301 tcgcagtcat catgcctctc cttcagcgct aacgcttatt cacctgttcg ataaagcccg
     3361 acgccgagat cttctggacg atggaattat cgtaaaactc ctgcggtttc atcgactttg
     3421 ctttggggct cttcgataca tcgag
//
LOCUS       DATIRS010000272         1548 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_512104, whole genome shotgun sequence.
ACCESSION   DATIRS010000272 DATIRS010000000
VERSION     DATIRS010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1548
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_512104"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1065)
                     /gene="selA"
                     /locus_tag="VLM90_03395"
     CDS             complement(<1..1065)
                     /gene="selA"
                     /locus_tag="VLM90_03395"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004125 - L-seryl-tRNA(Sec) selenium
                     transferase activity [Evidence IEA];
                     GO_process: GO:0016260 - selenocysteine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HSQ12029.1"
                     /translation="MAAEPTANPLREIPSIDHLLKHCRCEALLARYNREYVTEQCRAV
                     IEQRRAEIRQGKGLSQDLSEEAILKRLEMQILLDSQPGHIRVVNATGTILHTNLGRAL
                     LSEAAIEAMTAVARHPVNLEYDLTAGKRGKREETLETLLIELTGAEAATVVNNNAAAV
                     LLGLNTLAEGKEVIVSRGELIEIGGSFRIPEIMAKSGAILKEVGSTNRTHPADYENAV
                     NERTALLLKVHTSNYKVVGFTAEVTLDQMVAIGRKHNLPVMEDLGSGALIDLSQYGLA
                     KEPLVGERIAAGADVVTFSGDKVLGGPQAGLMVGKKELIGKMNKNHLQRALRCGKLTL
                     AALEATLRRYRQSPNIVEEIP"
     gene            1358..>1548
                     /locus_tag="VLM90_03400"
     CDS             1358..>1548
                     /locus_tag="VLM90_03400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12030.1"
                     /translation="MDLALAELEAKGEVMIRDHFCADPHLGGVDLRVIAAVESIDGND
                     PQVSAIRIIDEAWNRWLSE"
BASE COUNT          306 a          427 c          459 g          356 t
ORIGIN      
        1 aggaatctct tcgacgatgt tgggcgactg gcggtagcgg cgtagggtcg cttccagtgc
       61 ggccagagtc agtttgccgc agcgcagggc gcgttgcaga tgatttttat tcatcttgcc
      121 gatgagttct ttcttaccga ccatcaagcc cgcttgcggg ccgccgagaa ctttatcgcc
      181 gctgaaggtg accacgtcgg cgccggcggc gattctttcg ccgaccaacg gctctttcgc
      241 caggccgtac tggctcaagt cgatcaacgc gccgctgccg agatcttcca tcaccggcag
      301 attgtgcttt ctgccgatgg caaccatctg atccagcgtc acctcggcgg tgaagccgac
      361 gactttgtag ttgctcgtgt gtactttcag cagcagcgcg gttctctcgt tgacggcatt
      421 ttcgtaatcc gctggatggg tgcggttggt gctgccgact tctttcaaga tcgcgccgct
      481 cttggccatg atttccggaa tccgaaagga accgccgatt tcgatcaact cgccgcgcga
      541 gacgatcact tctttgcctt cggcgagggt attcaaccca agcagcaccg cggcggcgtt
      601 gttgttcacc accgttgctg cttcggcgcc ggtcaattcg atgagcaggg tctccagcgt
      661 ttcttcgcgc ttgccgcgct ttcccgccgt taaatcatat tcgaggttta ccgggtggcg
      721 cgcgacggcg gtcatcgcct caatggccgc ttctgacagt aaggcgcgcc ccaagttggt
      781 atgaaggatc gtgccggtgg cgttgacgac gcggatatga cccggttggc tatcgagcaa
      841 aatttgcatt tccagccgtt tgagaatcgc ttcctcgctt aaatcttgtg aaagaccctt
      901 gccctgacgt atctcggcgc ggcgctgctc gattacggcg cggcactgtt cggtgacgta
      961 ttcacggttg tagcgcgcca gaagagcttc gcagcggcag tgcttgagca agtgatcgat
     1021 ggagggaatc tcgcgcagcg ggttcgcggt cggttcagca gccatgagga aacaaagatt
     1081 tgcacaggga gagggcaatt tcaacatcag ataagtcaag ccgcgttata tggcgttcct
     1141 ggtttgacaa ggtcaaagcg gttccataga gttctgcgca aacaagcctc gcttcgatcc
     1201 aactgtaatg atgcgcagcc ccggaaccaa gactgcttct acggcgaaag acactcgcgg
     1261 agcgatcacc gatttacttg gcggccgtaa caaaaaagcc cggttcatga ccgaggttta
     1321 tgctgccttg aagcgctatg aaattgacaa agcggacgtg gacctcgcgc tggccgaatt
     1381 ggaagccaaa ggtgaggtga tgatccgcga tcatttctgc gccgatccac atctcggcgg
     1441 ggtcgatctc cgcgtgatcg cggcggtcga gagcatcgac ggcaatgatc cgcaagtgag
     1501 cgcgattcgg atcatcgacg aagcctggaa tagatggttg agcgagta
//
LOCUS       DATIRS010000273         1791 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_414484, whole genome shotgun sequence.
ACCESSION   DATIRS010000273 DATIRS010000000
VERSION     DATIRS010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1791)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1791)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1791
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_414484"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            113..1306
                     /locus_tag="VLM90_03405"
     CDS             113..1306
                     /locus_tag="VLM90_03405"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HSQ12031.1"
                     /translation="MPFGVLKDITVIECSTFVTGPYATALLADLGARVVKIESPPEGD
                     PYRYFAPDPFFSFNFAHLNRNKESLALDLKSPKGKEICLDLLKKADVFVENFRPGTAE
                     RLGIGYESLRDLNPKMVYCSISAFGQSGPYAEKPGFDTLGQAMSGLLSLLSDPDDPKV
                     MGMAVSDYVTGLSASYGILGALLAREKSGMGCRVETSLLQATLSFIGETAAGYLRTGN
                     VPNRMARVKNAHAFAFVCKDGRPLAIHCSVPEKFWLALLQAAERMDIAADERFKTRDA
                     RRQNYEALEQALAPTFENKTRDEWLQILQANDVPAVPLYNVAEVLDDPQVKHLGLMET
                     LEHPQAGALKFVGGPVRYDNLIKHKSTPPPLVGEHSGQVLRELGYGDETIRDLAARGI
                     TRIAS"
     gene            1364..>1791
                     /locus_tag="VLM90_03410"
     CDS             1364..>1791
                     /locus_tag="VLM90_03410"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HSQ12032.1"
                     /translation="MKLSLFTALLVFILTLGAAANAAQVKSMPGTSTPEIFKQFSEHV
                     VKIEVVETGSAAKASIGTGFFANERGHIVTNYHVISKLIHSPDRYRIDVTDVAGQTSQ
                     ATVLGVDVVYDLAVLRTGRPAKGFLTLESKAVDQGTRLYSL"
BASE COUNT          371 a          526 c          526 g          368 t
ORIGIN      
        1 gagtatcaaa tcggttggcg ccttgccaag cgattgcatt gaccggcata ccccatccgc
       61 tgcgttgcaa gccggagtga tccgtggaag attggccgcg aggagttgat ccgtgccatt
      121 tggcgtgctc aaagatatca ccgtcatcga atgttccacc ttcgtcaccg gcccctacgc
      181 gacggcgctg ttggccgatc tcggcgcgcg cgtggtcaag atcgagtcgc cgcctgaggg
      241 cgatccctat cgctactttg cgcccgatcc gtttttcagt ttcaatttcg cccatctcaa
      301 tcgcaacaaa gaaagcctgg cgctcgatct caagtcgcca aagggcaaag aaatctgcct
      361 cgacctattg aagaaggccg atgtgttcgt ggagaatttt cgccccggca cggcggagcg
      421 tctcggcatt ggctatgaat cattgcgcga tctcaatccg aagatggttt actgttcgat
      481 ctccgccttc gggcagagcg gaccttatgc cgagaagccc ggtttcgata ccctgggtca
      541 ggcgatgagc ggcttgttga gcctgctcag cgatcccgac gatcccaaag tcatgggcat
      601 ggcggtgtcg gactacgtga cgggattgtc cgccagctac ggcattctcg gcgccttgct
      661 ggcgcgggag aaatctggca tgggatgccg ggtggaaact tccctgctac aagcgacgtt
      721 gtcattcatc ggcgaaaccg ccgcgggtta cttgcgcacc ggcaacgtgc cgaaccgcat
      781 ggcgcgggtg aaaaacgccc acgcgtttgc gtttgtctgc aaggacggcc ggccgctggc
      841 gatccactgc tcggtgccgg agaaattctg gctggcgctc ttgcaagcgg cggaacgcat
      901 ggatatcgcc gccgacgagc gcttcaaaac ccgagacgcg cggcggcaaa attatgaagc
      961 gctcgaacaa gctctggcgc cgacttttga aaacaaaacc cgcgacgagt ggttgcaaat
     1021 tcttcaggcc aacgacgttc ccgcggtgcc gctctacaac gtcgccgaag tgcttgacga
     1081 tccacaggtc aagcatctcg ggcttatgga aacattggag catccgcagg cgggcgctct
     1141 caagttcgtc ggcgggccgg tgcgctacga caatttaatt aagcataaat ccacgccgcc
     1201 gccgctggtc ggcgagcaca gcggccaggt tttgcgcgag ctcggctatg gcgatgagac
     1261 gattagagat ctagccgctc gggggatcac gcgcatcgct tcttagacta taatcgttga
     1321 caaccaacgc attcgacacc acgatctcta tcctcttgca ccgatgaaac tgagcttatt
     1381 caccgctctg ctggttttta ttctgacgct tggcgcggcg gcgaacgcgg cgcaagtaaa
     1441 gtcgatgccg ggaacatcga cgccggagat cttcaagcaa ttttccgaac acgtcgtcaa
     1501 gatcgaagtg gtcgaaaccg gttcggcggc gaaggcgtcc atcggcaccg gattcttcgc
     1561 caatgaacgc ggccatatcg tcaccaacta ccatgtgatc tcaaaactga ttcactcgcc
     1621 ggatcgctat cgcatcgatg tcaccgacgt ggcggggcag acgagccagg cgacggtgct
     1681 cggcgttgac gtggtgtacg acctcgcggt gctgcgcacg ggccggccgg caaaaggatt
     1741 tctgacgctg gaatcgaaag ccgtcgacca gggcacgcgg ctctattccc t
//
LOCUS       DATIRS010000274         2125 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_512296, whole genome shotgun sequence.
ACCESSION   DATIRS010000274 DATIRS010000000
VERSION     DATIRS010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2125
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_512296"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            41..667
                     /locus_tag="VLM90_03415"
     CDS             41..667
                     /locus_tag="VLM90_03415"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSQ12033.1"
                     /translation="MSRHHHKLICLVVLLCCISAGCSRLKQWAYQGIDRDQWQQPDKV
                     IATLQILPGAEIADLGAGGGYFTFHLAKAVGPSGKVYAVDIDRGTNELIAERAKKDGA
                     DNIATILAQSNDPLLPKSAVDLIFTSNTYHHFDNRIDYFSNLRKYLKPDGRIAIIDFD
                     RRAWLEGLLRHYTPAEFIKREMEQAGYTLQQELTFLDRQSFLIFSINR"
     gene            complement(890..>2125)
                     /gene="otsB"
                     /locus_tag="VLM90_03420"
     CDS             complement(890..>2125)
                     /gene="otsB"
                     /locus_tag="VLM90_03420"
                     /EC_number="3.1.3.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004805 - trehalose-phosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-phosphatase"
                     /protein_id="HSQ12034.1"
                     /translation="INGKFGDIGWTPILYQYRSLSFDSLVALYSISDVALVTPLRDGM
                     NLIAKEYIASRLHNDGVLILSEMAGSARELGEAIIINPNIRDEIASALVAALNMPAME
                     QGRRMEIMQERLSRCDLSQWAQDILRELVAVQPSRQRVFAKLLGPQEMAAMLNHYRRA
                     SRRLIMLDFDGTLVPLVDDPRRANPTPALLKILASLAADPANELVLISGRDRATLHEW
                     FANLPVGLAAEHGAWRKKRSQQWTLARNLSCDWKPKLSPMMIQYADRLPGAFVEEKEF
                     SLVWHYRRADSEQGMVVARELMEDLLLFTGNIDVKVVQGNKTVEVRSLGLAKSLAARS
                     WLRNGEFDFILAIGDDHDDEELFGVLPQHAYAIRVGITQTAARFNLREPKEVVMLLEA
                     LTEAHALTRPPGSPSGPLG"
BASE COUNT          458 a          647 c          587 g          433 t
ORIGIN      
        1 tcgaaccatg ctcttcgtgg tgagtaaata aggtgcggca atgtctcgtc atcatcacaa
       61 actaatttgc cttgtcgttc tcctgtgctg cataagtgct ggctgcagca ggctcaagca
      121 atgggcctac caaggcatcg atcgcgatca atggcagcag ccggacaagg tcatcgctac
      181 attgcagatc ctgcctggcg ctgagatcgc cgaccttggc gccggcggcg gctactttac
      241 tttccatctt gccaaagcag tcggcccgag cggcaaagtc tacgccgtcg atattgatcg
      301 aggcaccaac gaattgatcg ccgaacgggc caagaaagac ggcgccgata acatcgcaac
      361 catcctcgcg caatcaaacg acccactgct gccgaaatcc gccgtcgatc tgatcttcac
      421 cagcaatacc taccatcact tcgacaaccg cattgactac ttttcaaacc tgcgcaaata
      481 tttaaaaccc gacggccgca tcgccatcat cgacttcgac cggcgcgcct ggttggaagg
      541 gctgttgcgc cactacacgc cggcagagtt cataaaacgc gagatggaac aggccggcta
      601 cacgctgcaa caagaactga ccttcctcga ccgccagtcg ttcctgatct tcagcataaa
      661 ccgctagtgt cgggccgctg caccacgatg agcccagcgc ggcagagccg caaccgaatt
      721 taagaatggc cgcaaagaac gcaaggggcg caaaaaagaa tcgggattgg taggggcggg
      781 tttcagacct gctcctacat ttctacaata tttttatcct attttgcgtt ctttgcgcat
      841 aacattccca atccgaaact ctcgcgttgt ggtttaaaac tctatttcgt caacccaacg
      901 gtccgctcgg actccccggc ggccgcgtca aggcgtgggc ttccgtcaag gcttcgagca
      961 gcatgaccac ttccttgggc tcgcgcaggt tgaagcgcgc cgcggtttgg gtgatgccga
     1021 cgcggatggc gtaggcgtgc tgcggcaaca cgccgaacag ctcttcatcg tcgtgatcgt
     1081 cgccgatggc aagaatgaaa tcgaactcgc cgttgcgcaa ccagctgcgt gccgccaacg
     1141 acttggcgag acccaagctg cgcacttcga cggtcttatt gccctggaca actttcacgt
     1201 cgatattgcc ggtgaaaagc agcagatctt ccatcagctc gcgcgcgact accatgcctt
     1261 gttccgagtc ggcgcggcga tagtgccaga ccagggagaa ttctttttct tcgacgaatg
     1321 ccccgggcag ccggtcggcg tactggatca tcatcggact gagctttggc ttccagtcgc
     1381 agctcaagtt gcgcgccaaa gtccattgtt gtgaacgttt tttacgccat gcgccatgtt
     1441 cggcggccag gccgaccggc aggttggcaa accattcatg taatgtcgcc cggtcgcgac
     1501 cgctgatcag aaccaattcg ttagccgggt cggcggccag cgaagcgaga atcttcaaca
     1561 gcgccggcgt cgggttggcg cgccgcggat cgtcgaccag cggcaccagg gtgccgtcga
     1621 aatcgagcat gatcagccgg cgcgacgccc ggcggtagtg gtttagcatc gcagccattt
     1681 cctgaggacc aaggagcttg gcaaataccc gctggcggct gggctggacc gcgaccagct
     1741 cgcgcaaaat atcttgcgcc cactgggaca gatcgcagcg cgacaaccgc tcttgcatga
     1801 tttccatgcg ccggccttgc tccatcgccg gcatattcaa ggccgcgacc aacgcgctgg
     1861 cgatttcgtc gcggatattg ggattgatga tgatggcttc gccgagctcg cgcgcagagc
     1921 cggccatctc gctgagaatc agcacgccgt cgttgtgcaa ccggctggcg atatattctt
     1981 tggcaatcag attcatgccg tcgcgcagcg gcgtcaccag ggccacgtcg ctgatcgagt
     2041 acagcgccac caacgagtcg aacgacagac tgcggtactg gtaaaggatc ggcgtccagc
     2101 cgatgtcgcc aaacttgccg ttaat
//
LOCUS       DATIRS010000275         1868 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_906184, whole genome shotgun sequence.
ACCESSION   DATIRS010000275 DATIRS010000000
VERSION     DATIRS010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1868
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_906184"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..295)
                     /locus_tag="VLM90_03425"
     CDS             complement(<1..295)
                     /locus_tag="VLM90_03425"
                     /inference="COORDINATES: protein motif:HMM:NF016144.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GrpB family protein"
                     /protein_id="HSQ12035.1"
                     /translation="MLAARQRCDTPAIRVERYAAKPARYFPYDPHAPQVAARVIDAIL
                     DCRSTLYVDHIGSTAVPGCGGKGIIDLLVSYPAGAFFVARDALDQLGFQAKGGP"
     gene            complement(569..886)
                     /locus_tag="VLM90_03430"
     CDS             complement(569..886)
                     /locus_tag="VLM90_03430"
                     /inference="COORDINATES: protein motif:HMM:NF018563.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine/purine nucleoside phosphorylase"
                     /protein_id="HSQ12036.1"
                     /translation="MSEFTNVTVIKKANVYFDGKVVSRTVVFADGSKKTLGIMQPGEY
                     EFGTGDKELMEIISGELDVALPGAASARPVKAGESFEVPANSKFRMVVKTLTDYCCSF
                     IAS"
     gene            complement(916..>1868)
                     /locus_tag="VLM90_03435"
     CDS             complement(916..>1868)
                     /locus_tag="VLM90_03435"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12037.1"
                     /translation="TALTPLFTTSAGLVFTIGVLTAVGSGAGSFSMLVGTVMHRLPPA
                     RRGIAAGIITAGGSFGQFVFAPITQALISLWGWMGAMWSLSVIALVALPLVRPISGPA
                     IGNGAVSANQTGADLRDMLKKAFADRSYLLLHGSFLTCGFHIAFLVTHLPGEVDLCGL
                     PASVASWSLAIIGLSNIAGCITAGWLLNRFRGKYVLFWMYGSRTLLILLYLAAPKTEW
                     TFYLMAVGLGFSWLGTAPPTAGVVGKLFGTRYLATLYGLTMLSHQTGAFFGAWLGGLA
                     FAHYGNYLSMWYADALFAAIAALLNLPIREPRVEAAALPA"
BASE COUNT          479 a          561 c          508 g          320 t
ORIGIN      
        1 cagggccccc cttcgcttga aagcccagct gatcgagggc gtccctggca acgaaaaacg
       61 cgcccgctgg ataagatacc aacaaatcga taatcccctt gccgccgcaa ccgggaaccg
      121 ccgtgctgcc gatatgatcg acataaagag tcgatcgaca atcgagaatc gcgtcgatga
      181 cccgcgcggc gacctgcggc gcgtggggat cgtagggaaa gtaacgcgcc ggtttggccg
      241 catagcgctc aactcttatg gcaggagtgt cgcaccgttg tcttgctgct agcaattgac
      301 caccctcgct ttcaagactt tgcccaagcc taagagcaag ctgagtgcca gcagcggaaa
      361 cagatgtaag taaaggatat tacggggatt acgaaaatgc ccactgcaaa agtgagcggc
      421 ccacagcaac cgcaggttac aatagaggca accgcggttg cagccgtctg agtctatttt
      481 ccgaacgtcg aggccggcgg cgagaacggc tcaccatcga cgtgccagct cggggcaatt
      541 tttgccgcgg gctagcgaac gccaacagct aggatgcgat gaaagagcag caataatcgg
      601 tcaacgtttt gaccaccatg cggaatttag aattcgccgg cacctcgaaa gactctcccg
      661 ctttcaccgg cctggcgctg gcggcgccgg gaagagcgac atccaactca ccactgatga
      721 tttccatgag ctctttgtcg ccggtgccga actcgtattc acctggctgc atgatcccca
      781 gcgttttctt agagccatcg gcaaagacca ccgtgcgact gacgacttta ccgtcgaagt
      841 aaacattggc ttttttgatg accgtgacat tggtaaattc agacattgta aaaatccttc
      901 ctgatcgaat taaatctatg ccggcagcgc ggcggcttcg actctcggtt cgcggatcgg
      961 tagattcaat agcgccgcga tcgccgcgaa caaggcatcg gcataccaca tcgacaaata
     1021 attgccgtag tgcgcgaagg caagcccgcc cagccacgca ccgaagaacg cgccggtctg
     1081 atgcgacaac atggtcaggc catagagcgt cgccaggtag cgggtgccga atagtttacc
     1141 gaccacaccg gcggtcggcg gcgccgttcc cagccatgaa aaaccaagtc cgacagccat
     1201 cagataaaac gtccactcgg ttttgggcgc ggcgagataa agcaaaatca gcaacgtccg
     1261 cgagccgtac atccagaaca aaacatactt gccccggaag cgattgagca accaaccggc
     1321 ggtgatacag ccggcaatat ttgacaaccc gataatcgcc agcgaccagc tcgccaccga
     1381 tgccggcaaa ccgcagagat ccacttcgcc gggaagatgg gtgacgagaa aagcgatgtg
     1441 aaagccacag gtcaaaaagc tgccatgcag caacaaataa ctgcgatcgg cgaaagcttt
     1501 tttcaacata tcgcgcaaat cggcgcccgt ttgattggca ctaaccgctc catttccgat
     1561 cgcggggccg ctgatcggcc gcaccaacgg caaggccacg agcgcgatga cgctcaagga
     1621 ccacatcgca cccatccagc cccagagaga aatcagcgcc tgagtaatcg gcgcaaagac
     1681 gaattggccg aaggaaccgc ctgcggtaat aatcccggcg gcgatgccgc gacgggccgg
     1741 cggtaaacgg tgcatcaccg tgccgaccaa catcgaaaag ctgccggcgc ccgatcccac
     1801 cgctgtgagc acaccgatgg taaacaccag ccccgcgcta gtggtaaata atggcgtcag
     1861 cgccgtgc
//
LOCUS       DATIRS010000276         1897 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_119167, whole genome shotgun sequence.
ACCESSION   DATIRS010000276 DATIRS010000000
VERSION     DATIRS010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1897)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1897)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1897
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119167"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            175..399
                     /locus_tag="VLM90_03440"
     CDS             175..399
                     /locus_tag="VLM90_03440"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSQ12038.1"
                     /translation="MPPLRMMAMAPGCYQIQNCSVEVLAVFTNTIATGPYRGAGRPES
                     VLNIERLIDKAARELGMDRLEIRRKNFIRP"
     gene            478..1500
                     /locus_tag="VLM90_03445"
     CDS             478..1500
                     /locus_tag="VLM90_03445"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSQ12039.1"
                     /translation="MSDYEKLIRYRDQARERGELVGVGLSTFAEPSGGAGFESATVRV
                     ERGGEITVLTGSSPHGQGHETVFAQVAVEKMRVSMDHVAIRHGDTLTIQEGGGTFGSR
                     SAIMGGGALVMAIDRVIEKARRIAANLMEAAAEDIVQTDGGLAVAGVPDKKASWRQIA
                     AAAYGMNLPRGMEPGLHETAFFDPKREAWGFGAHLALVRIHRDTGMPTVEKLVLVDDC
                     GVVINPMILNGQIHGGVAQGLGEALREQMLFGAGGEVLTDSLMNYAVPRASDIPEITL
                     GETVTPNPFNPLGVKGVGEAGCNGAPPAVANAVMDALAPLGIDHIDMPYTPPKLWAAI
                     RQAECR"
     gene            1579..1821
                     /locus_tag="VLM90_03450"
     CDS             1579..1821
                     /locus_tag="VLM90_03450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12040.1"
                     /translation="MGCWVNPDKCITPVLKFFNFPAAIDTRLSYPLRHALRALLADLP
                     VEQPMKFEFVMYLKTAKQIGVTIAPEVLARASKIIR"
BASE COUNT          417 a          525 c          581 g          374 t
ORIGIN      
        1 cagcccgcac ccaccaccat acgaagagaa gtcaccctta aaaaaccaaa actgggcgac
       61 aaacaacgca atggtcaaga cagcatatag tcctatcacc gagactccag ttacaaggat
      121 gagagacaaa gcagatgcca aaatctggca aattaaccaa actccctttc cgcgataccg
      181 ccgctgcgca tgatggcgat ggccccgggc tgctaccaga tccaaaactg ctccgtcgag
      241 gtgttggcgg tttttaccaa taccattgcc accggtccct atcgcggcgc ggggaggccg
      301 gagtcggtgc ttaacatcga gcggttgatc gacaaagcgg cgcgcgaatt gggcatggac
      361 cgcctggaaa tccggcgcaa aaactttatt cgcccctagc agttccctta ccgcacgggc
      421 gtaaacgtcg aatacgactc gggtgactat gaaaagtcgc tcgccgaggc gctgcgcttg
      481 tctgactacg aaaaacttat tcgctaccga gaccaagcgc gcgaacgcgg agagttggtc
      541 ggcgtgggcc tgtcgacttt cgctgagccg agtggcggcg ccggctttga gagcgcaacg
      601 gttcgggtgg agcgcggcgg agaaattacc gtgctcaccg gttccagccc ccacggtcag
      661 ggtcatgaga ccgtctttgc ccaggtggcg gtcgagaaga tgcgcgtttc catggatcac
      721 gtggcgattc gacacggcga taccctgacg attcaggagg gcggcggcac ctttggcagc
      781 cgcagtgcca ttatgggggg cggagccttg gtgatggcta ttgatcgggt cattgaaaag
      841 gctcgccgca ttgccgcaaa tttgatggag gcggcggccg aggacatcgt tcagacggat
      901 ggcggcttgg cggtggctgg agtgcccgac aaaaaagctt cctggcgcca aatcgccgcc
      961 gccgcgtacg gaatgaacct tccacgcggt atggagcccg gtcttcacga gaccgccttc
     1021 tttgatccaa agcgcgaggc ctggggcttc ggcgcgcatc tggcgctggt gagaatccat
     1081 cgagacacgg gcatgccgac ggttgaaaaa cttgtcctgg tcgatgactg cggcgttgtc
     1141 attaacccaa tgattctcaa tgggcagatt cacggaggcg tagctcaggg cctcggtgaa
     1201 gcgcttcgcg aacagatgct ctttggcgcc ggcggcgagg tgctcaccga ctctttgatg
     1261 aattacgcgg tgccgcgcgc cagtgacata cccgagatca cgttgggcga gacggtgacg
     1321 ccgaatccgt ttaacccgtt gggagtcaag ggcgtgggcg aggccggatg caacggagcg
     1381 ccgccggcag tggccaacgc cgtcatggac gcgctggctc ccctaggtat cgaccatatc
     1441 gacatgccct ataccccgcc caaactctgg gcggcgatac ggcaagccga atgccgctga
     1501 cgcgttgttt catgttgcga gcttctgcgg cggataaggt gatcagatga aaagacggag
     1561 tgatggagta gtggagtcat ggggtgttgg gtcaatccag acaaatgcat taccccagta
     1621 ctcaaattct tcaatttccc ggcggcaatt gacactcgtt tgtcttaccc tttgcgccat
     1681 gctcttcgcg ctttgcttgc cgacctgccc gtcgagcaac cgatgaagtt cgagttcgtg
     1741 atgtatctga aaaccgcaaa gcagatcggc gtaacgattg cgccggaggt gctggcgcga
     1801 gcgagtaaaa tcatacggta ggggtgaagg gtaaggcgac tcggataaat accagatcct
     1861 tcaattcgtt cagcgtctgc cctgagcgtg tcaaagg
//
LOCUS       DATIRS010000277         1604 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_709894, whole genome shotgun sequence.
ACCESSION   DATIRS010000277 DATIRS010000000
VERSION     DATIRS010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1604)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1604)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1604
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_709894"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(109..1278)
                     /locus_tag="VLM90_03455"
     CDS             complement(109..1278)
                     /locus_tag="VLM90_03455"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ12041.1"
                     /translation="MQRNPRMVMAIALSASLFFGSAFGAEKTPAKETVKDAAKAPAAA
                     AKKAGGQQVKSETASATATAKAAKAFAQVSAELYPKAKQEGNLVVYSVWDVEHLRVIT
                     EAFMKRYPGIKATFWQGRNPEIVTRALTEFQGGQASFDVVLSDNAPAVIRAAGAIMDY
                     NTVQRDVLYLHDPNMATVSLQIQALAYNTKKIKPADLPKSWEEVATPKYKGMIALDDP
                     MRAGPLSSMLAGLKTQWKDDARLNNFIRNLKALGVPVHKSTSAMFRLVISGEYAICMP
                     ALLHDVMEEMHKGTPVGYVKTVPPVVFPRQAAIYAKAPNPNTAKLFAEWLISDEGQKT
                     TDSIGRETSRNDFKSKTSIESAYGKNMKPLPVIDQQFLEDPKSWLDKFVKPVWEG"
     gene            complement(1320..>1604)
                     /locus_tag="VLM90_03460"
     CDS             complement(1320..>1604)
                     /locus_tag="VLM90_03460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12042.1"
                     /translation="HGAKWRHVFFKVTLPILKPAVGGALFYIFIEAIRNVDVAVLLTA
                     PGLEYGPVTLFEYFRVGQWAEAAAGGVIYLIILIVAVSVAKFAFKMKFSL"
BASE COUNT          327 a          470 c          435 g          372 t
ORIGIN      
        1 ttttcagtca caggtgtcat agcgcaaccg cgacgtcagg cgcgctctga gcgctctaac
       61 gcgctatctg ccataattgc gcactcgggt acatgacaga acaggcgact acccttccca
      121 gaccggcttc acgaacttat cgagccagct cttgggatct tcgagaaact gctgatcgat
      181 caccggcagc ggcttcatgt tcttgccata ggccgattcg atggaagtct tggatttgaa
      241 atcgttacgc gaggtctcgc ggccaatcga atcggtggtt ttttgcccct cgtcggaaat
      301 caaccactcg gcgaaaagtt tcgcggtatt tggattgggc gctttggcat aaatagccgc
      361 ttggcggggg aacaccacgg gcggcaccgt tttgacgtag cccacaggcg tccccttgtg
      421 catctcttcc atgacatcgt gaagcagcgc gggcatgcag atcgcgtatt cgccggagat
      481 caccaggcga aacattgcgc tggtgctctt gtgtaccggc acgccgagcg cttttaaatt
      541 gcggatgaaa ttattcaagc gcgcgtcatc cttccattgg gttttcaagc cggcgagcat
      601 cgagctcagc ggcccggcgc gcatgggatc gtcaagggcg atcatgccct tgtacttggg
      661 agttgccact tcttcccaac tcttcggcaa atccgccggc ttgattttct tggtgttgta
      721 agccagcgcc tggatctgca aactcactgt cgccatgttg ggatcgtgca gatacaagac
      781 atcgcgctgt accgtgttgt aatccatgat cgccccggcg gcacgaatca ccgctggcgc
      841 attgtcggaa agcacgacat cgaagctcgc ctgcccgcct tggaattcgg ttagcgcgcg
      901 ggtgacgatt tcgggatttc tgccttgcca aaaggtcgcc ttgattcccg gatagcgttt
      961 catgaacgcc tcggtgatca ctctgagatg ctcgacatcc cagactgagt agaccacgag
     1021 atttccttcc tgcttggcct tgggatatag ctcggcgctc acttgggcaa acgccttggc
     1081 ggctttggcg gtcgccgtcg cactcgcggt ttcgctcttt acctgttggc cgccggcctt
     1141 cttagcggcg gcagcgggcg ccttcgcggc gtctttcacg gtttctttag cgggcgtttt
     1201 ctcggcgccg aacgccgaac caaaaaacag gctcgctgac aacgcgatgg ccatgaccat
     1261 cctcggattc ctttgcatgc taccctcccc tggttccaat tcgttgatat gaccaaccgt
     1321 cacagactga acttcatttt gaaagcgaat ttagccacag acacggcaac aatcaagata
     1381 attaagtaga tcacaccgcc ggcggccgcc tcggcccact ggccgacacg aaaatactcg
     1441 aataacgtca ccggtccata ttccaaccct ggcgcggtca atagcacggc gacgtcgacg
     1501 ttgcgaatcg cctcaatgaa aatgtagaag agcgcgccgc cgacggcggg tttcaagatc
     1561 ggcagggtga ctttgaagaa tacatggcgc cacttcgcgc catg
//
LOCUS       DATIRS010000278         3676 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_512780, whole genome shotgun sequence.
ACCESSION   DATIRS010000278 DATIRS010000000
VERSION     DATIRS010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3676
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_512780"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1082
                     /locus_tag="VLM90_03465"
     CDS             <1..1082
                     /locus_tag="VLM90_03465"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSQ12043.1"
                     /translation="LGKNKFFRFRDVLLNPPSWRMGEFLEYDEAKTFAKYDGMTFAEF
                     ASAAQLPSPLRLTFNTFARAFFAPAEKLSTAELMKSFHFFYLSHDHGLLYDYFDTDYH
                     SALLEPILSHLQRHHVSIRLNHRVEGIGRENNLLTVGAEPFDYLILASDVTGTRSICQ
                     HSPWIEAASAKTWSQLTSLQASSGYAVYRIWLDRRTGDNFPVFIITEKRAVLDSVTFY
                     HQFDNNAADWARRSGGGVYELHCYALPDGMADADVKAAFCAELHGFFPELRAATMIHE
                     HLQVRRDFTAFYTNLHENRPEYRTAITNLYLAGDWVKTGTPAMLMEGAFTSGVLCANA
                     ILAQHGLCEEPVRSVPTRGIFAKLN"
     gene            1084..1761
                     /locus_tag="VLM90_03470"
     CDS             1084..1761
                     /locus_tag="VLM90_03470"
                     /inference="COORDINATES: protein motif:HMM:NF039186.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016872 - intramolecular lyase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lycopene cyclase domain-containing protein"
                     /protein_id="HSQ12044.1"
                     /translation="MSYTYLFINLFIIVIPLALTFDKRTAYFRQIAAVGFATGFVSAC
                     YLIWDVLVTARGEWSFNGKYLTGVQLLNIPIEEVLFFITVPYSCLFIYEVVLFTTTDR
                     FYKMSTPVLITVIVLLAAASLALRDQGYTSKALASCSFFLTVASWLDRPLLTSRRYWT
                     WLAICYIPFLLVNSVLTALPVVEYNPTAIFGLRVFTIPIEDFFYNYAMLSFYLLFYRR
                     HRKSLEP"
     gene            1990..2694
                     /locus_tag="VLM90_03475"
     CDS             1990..2694
                     /locus_tag="VLM90_03475"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSQ12045.1"
                     /translation="MGSFALWSELNFGLGRRGWGVAIGGRDLAIGVAHAQNLGPAETL
                     RVNLGIVNAYVLVRGKEAAVVDTGTPNNGSKIADVVRTAGLNWDAVHHVILTHYHPDH
                     IGSVGEVPGLAVKATAYAGAADIAQIKSPRPPKAVRDNDEVFGLRMIATPGHTPGHLG
                     VFDPVGSLLILGDAMNNIGNKLGGPAPQYTADMAQAHQSVKKLAKLTFQRAVFGHGDP
                     IDKGASQAIAKLAGTL"
     gene            complement(2761..>3676)
                     /locus_tag="VLM90_03480"
     CDS             complement(2761..>3676)
                     /locus_tag="VLM90_03480"
                     /inference="COORDINATES: protein motif:HMM:NF014841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ12046.1"
                     /translation="VEAAKAHSLESLAKALDGAEILHVYNSAFTAEFARLVRDKGRAL
                     KWLQFTTVGVEIGLKAGLPEGVWVTNSGDVSQRVLASHAMALMLGVMRDFRRFEQRRA
                     RREWARHGMSSHILDPDGARMVILGMGHIGQDIARKAKAFDMEVICVTRSPSPAVPEI
                     DRVVSRERVNEVLPSADVVMVAMPLDSDTRGFLSAERIALMKETAILVNISRGKVVDE
                     AALARALAEGRIMGAGLDALAEEPLPAASPLWDLPNVLLTPHVGGQGGRQLWRRMSEL
                     IRDNTRRYLSGAPLKHVVRTPDGTLQGF"
BASE COUNT          714 a         1125 c         1036 g          801 t
ORIGIN      
        1 cgctcggaaa aaacaagttt ttccgtttcc gcgatgtctt gctcaatccg cccagctgga
       61 gaatgggcga gttcttggaa tacgacgaag cgaagacatt cgctaaatat gacggcatga
      121 cgttcgcaga attcgccagc gcagctcaac tgccatcgcc cttgagactg accttcaata
      181 ccttcgcgcg cgccttcttc gcgcccgcag aaaaattgag cacggccgag ctgatgaaga
      241 gttttcattt tttctatctc agccacgatc atggtttgct ctatgattac ttcgataccg
      301 attatcacag cgcactactc gaaccgatcc ttagccatct acagcgccac catgtatcga
      361 tccgcttgaa ccaccgggtc gaggggattg gccgcgaaaa caatctgttg accgtcggag
      421 ccgagccgtt cgactacctc atccttgcct cggacgtgac cggcacccgc agcatttgtc
      481 aacattctcc ctggatcgag gccgcatcgg caaagacttg gtcgcagctg acctcgttgc
      541 aagcttccag cggttacgcc gtgtaccgga tctggctcga tcggcgcacc ggcgacaact
      601 tccccgtctt cattatcacc gaaaagcgcg ccgttctcga ctccgtgacc ttctaccatc
      661 aattcgataa caacgccgcg gactgggcgc gccgttccgg cggcggcgtc tacgagctgc
      721 actgttacgc gctgcccgac ggaatggccg atgccgatgt caaagcggct ttttgcgccg
      781 agctgcatgg cttttttccc gagcttcgcg cggcgacgat gattcatgag catctgcagg
      841 tcaggcgtga tttcaccgcc ttttatacta atctgcatga gaacagaccc gagtatcgaa
      901 cggccattac caatctctat cttgccggcg attgggtcaa aaccggcaca ccggcgatgc
      961 ttatggaagg cgcctttaca tccggagttc tttgcgccaa cgcgattctg gcccaacacg
     1021 gtctttgcga agagccggtg cgctccgtgc caacgcgcgg gatcttcgca aaactcaact
     1081 gaaatgtcat acacctatct tttcatcaat ctcttcatta tcgtcatccc gcttgccctg
     1141 acatttgaca agcgaacagc ctacttccgc cagatcgccg ccgtcggttt tgcgaccggt
     1201 ttcgtgagcg cctgctatct gatttgggat gttctcgtca cggcgcgcgg cgaatggagc
     1261 tttaacggca aatatctgac cggcgtccag ctgctgaaca tcccgatcga agaagtgctt
     1321 ttcttcatca ccgtgcctta tagctgcctg ttcatctacg aggtggtttt atttacgact
     1381 acagacagat tttacaaaat gtcgactccg gtattgatca cggtgatagt cctgctggcc
     1441 gcggcgagtt tggcgctgcg tgatcaagga tacacttcga aagcgctggc ctcgtgcagt
     1501 ttttttctca ctgtcgcctc ttggttggac cgtccgctgc tgaccagccg ccgttattgg
     1561 acgtggttgg cgatctgtta catcccgttt ctgctggtca attcagtgct gaccgcgctg
     1621 ccggttgtgg agtacaatcc tacggcgata ttcggcctgc gcgtgttcac gattcccatc
     1681 gaagattttt tctacaacta cgcgatgttg tccttctacc tgctgtttta tcgtcggcat
     1741 agaaaatcac tagagccgta gcaggcaaaa acgtttttgc cgcgccgccg cacttggatc
     1801 ctcggacgcc gccaccgggt gctgcgccga cgccgacgcc attgactttc gcaacctgag
     1861 acgagacatt tttacatgtt tcccgcgccg gctacatgtc catgataacc gtgctgtctt
     1921 gaagactgga ggtgttcaat gcgtaaaggt cagcaaatca gtcgccgaac ctggttggcc
     1981 caggtttcct tgggaagttt cgcgctatgg agcgaactca atttcggcct tgggcgcagg
     2041 gggtggggtg tcgccatcgg cgggcgcgat ctcgcgatcg gcgtcgccca cgcgcagaac
     2101 ctggggccag ccgaaacact gcgggtgaac ttgggcatcg tcaacgccta cgtcctggtc
     2161 cgcggcaagg aggcggcggt ggtcgatacc ggcacgccca acaacgggtc aaagatcgcc
     2221 gacgtagttc gcaccgccgg cctgaattgg gatgcggtac accacgtgat cctgacccac
     2281 tatcatcccg atcacattgg cagtgttgga gaagttccgg ggttggccgt caaggcgacg
     2341 gcctacgccg gcgccgcgga catcgcgcag atcaagtcgc cgcgcccgcc caaggcggtc
     2401 cgtgataacg acgaagtgtt cggcctgcgc atgatcgcga cccccggtca cacaccgggt
     2461 cacctaggcg tattcgatcc ggtcggatcg ctgctcatcc tcggcgacgc catgaacaac
     2521 atcggcaata agctcggtgg tccggcgccc caatacaccg ccgacatggc ccaggcgcac
     2581 cagagcgtga agaagctggc gaaactcact ttccagcgcg ctgtcttcgg ccacggtgat
     2641 ccgatcgaca agggcgcctc gcaggcgatc gccaagctgg ccggcactct atgagagttc
     2701 gcctagatcg aagttggatc tattagtcaa ttaccgaaga gagcttccaa cctgtggctt
     2761 tcaaaaacct tgaagcgttc cgtcgggggt tctgacgaca tgcttgaggg gtgcgcctga
     2821 aagatagcgg cgcgtgttgt cgcggataag ttcgctcatc cgccgccaca attgccgtcc
     2881 gccctgaccg ccgacatggg gcgtcagcaa cacatttgga agatcccaca gcgggctcgc
     2941 tgcaggcaac ggttcctcgg cgagagcgtc tagtccggcc cccatgatgc ggccctcggc
     3001 gagggcgcgg gccagtgccg cctcgtcgac taccttgccg cgggagatat tcacgaggat
     3061 tgccgtctcc ttcatgagcg cgattctttc ggcgctgaga aatcccctgg tgtcgctgtc
     3121 cagcggcatc gccaccatga ccacatcggc actgggaagg acctcgttta ctctttcccg
     3181 ggacaccacg cgatcgatct ccggcacggc gggggaaggc gagcgggtga cgcagatcac
     3241 ctccatatcg aacgccttgg ccttgcgcgc aatgtcctgg ccgatgtggc ccatgccgag
     3301 gatcaccatg cgcgcgccgt cggggtcgag tatgtgggaa gacatgccgt ggcgcgccca
     3361 ctcgcgccgt gcgcgccgtt gctcgaaccg gcgaaagtcc cgcatgacac ccagcatcag
     3421 ggccatggcg tggctggcta gcacccgctg gctgacgtcg ccgctgttgg tgacccagac
     3481 cccctcaggc aagcccgcct ttaggccgat ttcgacaccg acggtggtga actgaagcca
     3541 cttgagggcg cgccctttgt cacgcaccag gcgggcgaat tccgcggtga aggcggagtt
     3601 gtaaacatgg aggatttcgg cgccgtcgag tgccttggcg agggattcga ggctatgagc
     3661 cttggccgcc tcaacc
//
LOCUS       DATIRS010000279         2553 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_611963, whole genome shotgun sequence.
ACCESSION   DATIRS010000279 DATIRS010000000
VERSION     DATIRS010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2553
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_611963"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..599
                     /locus_tag="VLM90_03485"
     CDS             <1..599
                     /locus_tag="VLM90_03485"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSQ12047.1"
                     /translation="VDIGNVVAANNGSLLVIKRLDPVYADFTVTENDLTAVQRNMTKR
                     SLRVEVRLPDENVGPREGKLTFLDNAVQEGTGTVKLRATLPNSDRRFWPGRFAKIRLV
                     LDTRADAVLVPAEAPQLSAKGSFVYVVKNDSSAELRPVQLGQRQGELVVVTEGVKADE
                     KVVVKGQLGVTPGGKVSIAAQPAEKKQAPEAAKAGAKP"
     gene            596..>2553
                     /locus_tag="VLM90_03490"
     CDS             596..>2553
                     /locus_tag="VLM90_03490"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSQ12048.1"
                     /translation="MNFSEPFIRRPVLTMVLTLSVILFGVLSYLRLPVNDLPAVDYPV
                     IQVQADYPGASPDTVANNIATPLERQFMQINGLELVTSKSTQGHTNLTLQFALSKSID
                     AAATDVQTAISQATGSLPVDLPSPPTFSKTNPNDQPIMYIALTSDSVTRGQLYDYGST
                     QIGQRISILPGVSRVSVFGTKSAIRIKADPSAMWARGISIDDLTTAVKSGTSYTGAGQ
                     FDSADGTTLLRPQGQLDSAQGYSQLIVGGKNDAPVYLRDVAQVRDSVQDERLSMRFWA
                     RGYPVPGATVVMAVFRQAGANAVEVANSIRALLPQISAELPGSVLITPLYDRSRSIVN
                     SVNDVKETLLIAFVLVVLVIFLFLGRATDTLIPAVALPISLLLTFIAMELLGYSLDNL
                     SLMALTLAIGFLVDDAIVFLENTVRRMERGEAALEATIQSAKEISFTILSMTISLAAV
                     FIPLVFMSGLVGRIFREFAITIVVSIIASGLVSLTLTPLMCARLLKARGEGSKRTWME
                     RKVGGMENRVLDRYGRGLSWFLVHRWFSALIWLVCIVGTVYFFIVVPKAFLPPGDSGV
                     VTGVFIAREGSSPEQMRVIQDQVDAALLRNPNIMATIEVAGLGQFIASNQGIIFTFLK
                     PAGTRGPIQQEVANLMVSLGSIPGVIAF"
BASE COUNT          474 a          745 c          765 g          569 t
ORIGIN      
        1 ccgtcgatat cggcaacgtg gtcgcggcca acaacggttc gctgctggtg attaagcgct
       61 tggatccggt ttacgctgat tttaccgtga cggaaaatga tctgacggcg gtgcagcgca
      121 acatgaccaa gcgcagtttg cgcgtggaag tccgcttgcc ggatgagaat gttggtcctc
      181 gcgagggcaa gctcacgttt ctcgataacg ctgtccaaga gggcaccggc acggtaaagc
      241 tgcgcgccac cctgcctaac tcggatcgcc gtttttggcc cggccgattc gctaaaattc
      301 gtttagtcct cgacacccgc gcggatgcgg ttctggtgcc ggccgaggct ccacagttat
      361 ccgccaaggg ttcgttcgtc tatgtggtta agaatgactc gtcggctgaa cttcggccgg
      421 tgcagctcgg ccaacgtcag ggtgaattgg tagtcgtcac agagggcgtc aaagccgacg
      481 agaaggttgt cgtcaaaggc caactgggtg tcacaccggg agggaaggtt agcatcgccg
      541 cgcagcccgc tgaaaaaaag caggctccag aggcggccaa agccggagcg aagccgtgaa
      601 cttctccgag ccctttattc gccgaccggt gctgacaatg gtcttgacgt tgtcagtgat
      661 tctattcggc gtgctcagct acctgcgctt gccggtgaac gatctgccgg cggtcgatta
      721 tcccgtcatt caagtccaag ccgactaccc cggcgccagc cctgacacgg tggccaacaa
      781 tattgccacg ccgctggaac gccagttcat gcagatcaat ggcctggaat tggtcacttc
      841 caaaagcacc cagggccaca ccaatctgac gcttcaattc gccctgagca aaagcatcga
      901 tgcggcggcg accgatgtgc agacggcaat ttcccaggcc accggcagtc tgccggtgga
      961 tctgccgtcg ccgccgacat tttcgaaaac caaccccaat gatcagccga tcatgtacat
     1021 cgcgctgacc agcgactccg tgacgcgcgg tcaactgtat gattatggca gcacgcagat
     1081 cggccagcgc atcagcatct tgccgggagt ttcccgggtc tcggttttcg gcaccaaatc
     1141 ggcaattcgc atcaaggcgg atccctcggc gatgtgggcg cgcgggattt ccatcgatga
     1201 tttgaccacg gcggttaaga gcggcacgag ctacacgggc gcgggacagt tcgatagcgc
     1261 ggacggcacg actttgttgc ggccgcaagg gcagctcgac agcgcccagg gctatagcca
     1321 gttgatcgtc ggcggcaaga atgacgcgcc ggtttatttg cgcgatgtcg cccaggtgcg
     1381 cgactcggtc caagacgagc ggctgagcat gcgcttttgg gcgcgcggct atccggtgcc
     1441 gggggcgacc gtcgtgatgg cggttttccg ccaggccggc gccaacgccg tcgaggtggc
     1501 aaacagcatt cgcgcgctgt tgccgcaaat cagcgccgag ctgcccggat cggtgctgat
     1561 cacgccgctt tacgaccgct cccgcagcat cgttaactct gtcaacgacg tcaaagaaac
     1621 gcttctgatc gctttcgtgc tcgtcgtctt ggtgattttt cttttccttg gacgcgccac
     1681 cgacacgctg atccccgcgg tcgccttgcc gatttcgctg ttgctgacat tcattgcgat
     1741 ggagctgctc ggctacagcc tggacaatct ttcgttgatg gcgttgactt tggctatcgg
     1801 ttttttggtc gacgacgcca tcgtgttttt agaaaacacc gtgcggcgca tggagcgcgg
     1861 cgaagcggcg ctggaagcga ccatccagag cgccaaggaa attagcttta cgattttatc
     1921 gatgaccatt tcgttggccg cggtgtttat tccgctggtt ttcatgtccg ggctggtcgg
     1981 ccgaatcttc cgcgaattcg caattaccat cgtggtctcg attatcgcct ccggtttggt
     2041 gtcgctgacg ctgacgccgc tcatgtgcgc ccgcttgctc aaagctcggg gcgagggttc
     2101 gaagcgcact tggatggagc gcaaagttgg cggtatggaa aaccgggtgc tcgaccgcta
     2161 cgggcgcggg ctctcctggt ttctcgttca tcgctggttc tcggcgctga tttggctggt
     2221 ttgcatcgtc ggcaccgtgt actttttcat cgtcgtgccg aaggcatttt tgccgcccgg
     2281 cgatagcggt gtggtgaccg gcgtgtttat tgctcgcgaa ggttcgtccc ccgaacagat
     2341 gcgtgtgatc caagaccagg ttgatgccgc gctgttgcgc aaccccaaca tcatggccac
     2401 catcgaagtc gccggcctgg gccaattcat cgcttccaat caggggatta ttttcacatt
     2461 tctcaaaccg gccggaacac ggggaccgat tcagcaggaa gtcgccaacc tgatggtcag
     2521 cctgggctcg attccgggcg tcatcgcttt ttt
//
LOCUS       DATIRS010000280         1646 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1005427, whole genome shotgun sequence.
ACCESSION   DATIRS010000280 DATIRS010000000
VERSION     DATIRS010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1646
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1005427"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..229)
                     /locus_tag="VLM90_03495"
     CDS             complement(<1..229)
                     /locus_tag="VLM90_03495"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HSQ12049.1"
                     /translation="MKSRAAVAWEAGKPLIIEEVEVGAAKPGEVLLKIAATGVCHTDA
                     YTLSGNDPEGLFPAIMGHEGGATVLEVGAGVT"
     gene            406..1023
                     /locus_tag="VLM90_03500"
     CDS             406..1023
                     /locus_tag="VLM90_03500"
                     /inference="COORDINATES: protein motif:HMM:NF019590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NIPSNAP family protein"
                     /protein_id="HSQ12050.1"
                     /translation="MFLEMRTYVLKPGMTNNFVERFAEGLTARLQFSKLLGLFCSEVG
                     GLNRVTHVWPYESFEDRERIGGEARKTGKWPPKTQEFIVTQENKIVQLAPYSPPLPEK
                     KLGELYEFRTYTYQPGAMPTVFERWGKVIGARAKVSPLVFAGQTIIGPLNQYIHVWAY
                     KDAGERERLRAEASKTVEGWPPPTRELLVMQENTIMTPAPCAPFK"
     gene            1194..>1646
                     /locus_tag="VLM90_03505"
     CDS             1194..>1646
                     /locus_tag="VLM90_03505"
                     /inference="COORDINATES: protein motif:HMM:NF013355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12051.1"
                     /translation="MFYKSLIRPILFRKDPEVSHDAVLHMLAGNEWLYGTIEDFYKVE
                     DQRLVVNIGPLTFANPVGLAGGFDKNALAPKMISAFGFGFMEVGAITAQAQPGNPKPR
                     LYRLPEDDALINRLGFNNEGADAIAVKLDRLRARGGRPKIPLGMNIGRT"
BASE COUNT          346 a          469 c          480 g          351 t
ORIGIN      
        1 tggtcacgcc ggcgccgact tccagcaccg tggcgccgcc ttcatggccc atgatcgccg
       61 gaaacaatcc ttcgggatca ttgccggaaa gcgtgtaggc atcggtgtgg cagacaccgg
      121 tggcggcgat cttgagcagt acctcgcccg gtttggctgc gccgacttcg acttcttcaa
      181 tgatcaacgg tttgccggcc tcccaggcga cggctgcgcg cgatttcata ggacctcctg
      241 agttacacac aggcgaaacg gtgcttcgcc gtgaaatatc ccttgtgatg gactacccta
      301 agcctcttag cagattcgtg atgccatgaa aacggccgac gcgacggttg caatacttgc
      361 accatttgtg ggaaaggata gggactaatt attggaggtg gcgctatgtt tcttgagatg
      421 agaacttatg tgttgaaacc agggatgacg aataattttg tcgagcgctt tgccgagggg
      481 ctaacggcgc ggctgcaatt ttccaagctg cttggactat tctgctcgga agtcggcggt
      541 ctgaaccggg tgactcatgt ctggccctac gagagcttcg aggatcgcga gcgcatcggc
      601 ggcgaggcgc gcaagaccgg caaatggccg cccaagacgc aagagttcat tgtcacgcaa
      661 gaaaacaaga tcgtccagtt ggcgccgtac tcgccgccgc tgccggaaaa aaagctcggc
      721 gagctatatg agtttcgcac ctacacgtat caacccggcg ccatgccgac ggtctttgaa
      781 cgctggggca aggtaatcgg cgctcgcgcc aaagtatcgc cgctggtttt tgccgggcag
      841 acgatcatcg ggccgctcaa ccaatatatt catgtttggg cctacaaaga cgccggcgag
      901 cgcgagcgtc tgcgcgccga agcatcgaag accgtcgaag gttggccgcc gcctaccagg
      961 gagctgctgg tgatgcagga aaataccatt atgactccgg cgccctgtgc gccgtttaaa
     1021 taaactgaaa gccagtcagt aaattgcggc gagtgccacg ttgaggcgag gcaccgtcat
     1081 gggacagggg gagcgttcgc gttctccctg tttttttgtg cccgtgaccc gcacgccgct
     1141 tcgcgcagtc tctggaagta ataaaagttt tccgatacat cgttcaggtg tccatgtttt
     1201 ataaatcgct gattcggcca atcttatttc gtaaagatcc cgaggttagc cacgatgcgg
     1261 tcttgcacat gctcgccggc aacgagtggc tttacggcac catcgaagat ttttataaag
     1321 tcgaagacca gcggctagtc gtcaatatcg gcccgctgac ttttgccaac ccggtgggac
     1381 tcgccggtgg tttcgacaag aacgctctgg cgcccaagat gatatccgcc ttcggtttcg
     1441 gcttcatgga agtgggcgcg atcaccgccc aggctcagcc cggcaatccg aaaccgcgcc
     1501 tttatcggct gcctgaagac gatgccttga ttaaccgcct gggcttcaac aacgagggcg
     1561 ccgatgccat cgccgtcaag ctcgaccgct tgcgcgcgcg cggcgggcgg ccgaagattc
     1621 ccctcggcat gaacatcggc cgcacc
//
LOCUS       DATIRS010000281         3259 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1791915, whole genome shotgun sequence.
ACCESSION   DATIRS010000281 DATIRS010000000
VERSION     DATIRS010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3259
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1791915"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..716)
                     /locus_tag="VLM90_03510"
     CDS             complement(<1..716)
                     /locus_tag="VLM90_03510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12052.1"
                     /translation="MIPAAEQHWLSESFVDPNGRLFEWRGELYRALDPVYAARWQQWA
                     KSGVIDGLVRAGLLIDSEWSGLKTDSGKAVLHHRRVAVQSYCYEWPPAMLRDAALLTI
                     DLCIRLAEQGLTLQDGHPWNILFEGTKPVYVDAGSIVPARDDILWAPYQQFCNFFLYP
                     LYLYAAGQDHIARWLMRDYLAGVSDGDLLAALPASFKLRHPRRTLGVTIPKAVSKLFE
                     HLPQDMQRRFLSRSKAANSGP"
     gene            complement(768..1541)
                     /gene="pgeF"
                     /locus_tag="VLM90_03515"
     CDS             complement(768..1541)
                     /gene="pgeF"
                     /locus_tag="VLM90_03515"
                     /inference="COORDINATES: protein motif:HMM:NF014619.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HSQ12053.1"
                     /translation="MELTRLTVPQWQKYDGLLHGFMGRRGGKSVGRYAGLNVSYRVGD
                     DNQVVSQNVCDMKLAMGIHDGKIVTMQQVHADTIVEVTDKKIKEAGAADGMVTGKNGV
                     YLGVLTADCVPLLFIAPRQRLAAAVHAGWRGTLAGIAAKTVEYFNRRYGVGAGELEVA
                     LGPSIGVCCYEVNDDVATPLMKKWGALTTPSIAMKDGKPHINLSRLNRDILRAAGVPG
                     TQLFQIGPCTRCAAEEFFSYRREGGETGRQIGVVGWQAT"
     gene            1671..>3259
                     /locus_tag="VLM90_03520"
     CDS             1671..>3259
                     /locus_tag="VLM90_03520"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12054.1"
                     /translation="MNNGNYTDTLKQPGFFAFFCTQFLGAFNDNFLKIVVSFVALSLA
                     GHGGDFYVELIAILFILPSALFSGYAGHLADVYSKRTILVAVKAIEIAIMAFALVSFY
                     YADIWPMLAAVFLMGLHSAFFSPAKYGILPEMLPDKDLSRGNGLLEMSTFMAIILGTS
                     LGSAIFSVWKHELPRIGMIMMAIAVAGYFTSLGIARVPASGAAKLLNLNPFGEITVGL
                     RRLRRERTLWFTVLGISYFWFLGALVNINILFFGKELLQLDEFHIGLLGTFLAIGIGI
                     GSLAAGKLSGDHIELGLVPLGSVAMGFCLALVAWAAPSYPHTALALVLLGFAAGLFAV
                     PLNALLQQRSGKEEKGQLIATNNFLNTIGIALAAALHWFLKTPLQLSPDTIILLIGLF
                     TLAGTVAILYLLPDYFVRFVVWLLTNTLYRIRVVGGQNIPLHGPALLICNHVSFVDAL
                     LVGAPQPRFVRFMLHREYYDLKSLNWFFRLMHSIPVSANNRRDIVQSLKRARNELENG
                     HVVCIFAEGAISRTGRLLPFKR"
BASE COUNT          609 a          987 c          932 g          731 t
ORIGIN      
        1 ggtccgctgt tggccgcttt ggatctcgat aggaaacgtc gctgcatgtc ttgcggcaaa
       61 tgctcaaaga gtttgctaac ggcttttggg attgtcacgc cgagggtgcg ccgagggtgg
      121 cgcagcttga aggatgccgg caaggcggcg agcaagtcgc catcgctgac accggcaaga
      181 taatcgcgca tcagccaacg cgcgatgtga tcctgccctg cggcatagag atacaacgga
      241 tagagaaaaa aattgcagaa ctgctgatag ggcgcccaca ggatgtcgtc ccgcgccgga
      301 acgatcgagc cggcgtcgac atagacgggc ttggtgcctt cgaacagaat gttccacgga
      361 tgaccgtctt gaagcgtcag tccttgctcg gctaagcgaa tgcaaagatc gatcgttagc
      421 aacgctgcgt cccggagcat ggccggcggc cattcatagc aataagactg caccgccacg
      481 cggcgatgat gcagtaccgc cttgcctgag tcggttttga gcccgctcca ctcactgtcg
      541 atcaacagcc cagcgcgcac cagaccgtcg atcacgccgc tcttagccca ttgttgccaa
      601 cgcgccgcat acaccggatc aagcgcgcga taaagctcac cgcgccattc aaacagccgg
      661 ccattgggat cgacgaagga ctcgctcagc cagtgctgtt ctgcggcagg tatcatggcg
      721 cggagttctt gatgaactag atgaactaac ggaattaccg cgcagagtta cgtcgcctgc
      781 caaccaacca cgccgatctg ccggccggtt tcgccgccct cgcggcggta ggaaaagaac
      841 tcttcggcgg cgcaacgggt gcaggggccg atttggaaga gttgcgtgcc gggcacgccg
      901 gcggcgcgca ggatgtcgcg attgagccgg ctcagattga tatggggctt gccgtctttc
      961 atggcgatgc tcggcgtcgt cagcgcgccc cattttttca tcagcggtgt cgcgacgtcg
     1021 tcgttgacct catagcagca cacgccgatg gacggaccca gcgccacttc cagttcgccc
     1081 gctccgacac cgtaacgacg attgaagtat tccacggtct ttgccgcgat accggcaagc
     1141 gtgccgcgcc acccggcgtg gaccgcggcc gccaagcgct gcctgggcgc gataaacaat
     1201 agcggcacgc agtcggcggt gagcacgccg agatagacgc cgtttttgcc agtcaccatg
     1261 ccgtcggctg cgccggcttc ttttatcttc ttgtccgtca cttcgacgat ggtgtccgca
     1321 tgaacctgtt gcatggtaac gatcttgccg tcgtggatgc ccatggccaa cttcatatcg
     1381 caaacgtttt ggctgaccac ttggttatcg tcgccgacgc ggtaggaaac gttaagcccg
     1441 gcatagcggc cgacactctt gccgccgcgc cggcccatga agccatgcag caaaccatcg
     1501 tacttttgcc actgggggac tgttaaacga gtcaattcca tgggtgaatt atgttaattt
     1561 cgtcacgctt acgcaagctc gtcgtggttc caagtcgcaa ccgaatagac ggcttggcga
     1621 ggcttcgacc ttgccgaacc gtgcggagcc gagtaaatta gccagcaaga atgaacaacg
     1681 gcaactacac cgacacgctc aaacagccgg gattctttgc ctttttctgc actcagttct
     1741 tgggggcatt caacgacaat tttttaaaga tcgtggtctc gttcgtcgct ttgagcttgg
     1801 ccggccacgg cggcgatttt tacgtcgaac tgatcgccat cctgtttatc ctgccgtcgg
     1861 cgctgttttc cggttacgcc ggccatctcg ccgacgtcta tagcaagcgg acgatcctgg
     1921 tggcggtgaa ggcgatcgag atcgccatca tggcctttgc cttggtgtca ttttactacg
     1981 ccgatatctg gcccatgctc gcggcggttt ttctaatggg cttgcactcg gccttcttca
     2041 gcccggccaa gtacggcatc ttgccggaga tgctgccaga caaagacctt tctcgcggca
     2101 acggcctatt ggagatgagc accttcatgg cgatcatcct gggcacgtcg ctgggcagcg
     2161 cgattttctc ggtttggaaa catgagttgc cgcgcatcgg catgatcatg atggccattg
     2221 ccgtcgccgg ctattttacc agtctcggca tcgcccgggt gccggcatcg ggggcggcca
     2281 agctgctcaa cttgaacccc ttcggcgaaa ttaccgttgg cctgcgccgg ctgcgtcggg
     2341 aaaggacgct gtggtttacg gtcctcggca tctcttactt ttggtttctc ggcgcgctgg
     2401 tcaatatcaa cattctcttc ttcggcaaag agctattgca gctcgatgag tttcacatcg
     2461 gtctgttggg gactttcctg gcgattggca tcggcatcgg cagtctcgcc gccggcaaac
     2521 tttccggcga tcacatcgaa ttgggtttag taccgctcgg ctcggtggcg atgggctttt
     2581 gccttgccct ggtcgcctgg gcggcaccgt cctatccgca caccgcactt gccttggtgc
     2641 tgctcggctt cgccgccggc ctgttcgccg tgccgctcaa cgcgctgttg caacagcgca
     2701 gcggcaaaga agaaaagggc caactgatcg cgaccaataa tttcctgaac accatcggca
     2761 tcgccctggc cgcggcgttg cactggtttt tgaaaacccc gctgcagcta tcccccgata
     2821 ccatcatctt gctgatcgga ctctttacct tggccggcac ggtggcgatc ttgtacctgc
     2881 tgcccgatta ttttgtccgc tttgtcgtct ggctgttgac caatacgctt tatcgcattc
     2941 gtgtggtcgg cggccaaaat atcccgctcc acgggccggc gctcttgatc tgcaaccatg
     3001 tctccttcgt cgatgcgctc ttggtcggcg cgccgcagcc gcgcttcgtc cgcttcatgc
     3061 tgcaccggga gtattacgat ctcaaatcgc tcaactggtt tttccgcctg atgcactcga
     3121 tcccggtgtc ggcaaacaat cggcgcgaca ttgtgcagtc gctcaagcgg gcgagaaacg
     3181 aactcgaaaa cggccatgtg gtgtgcatct tcgccgaggg cgcgatcagc cgcaccggcc
     3241 ggctgctgcc gttcaagcg
//
LOCUS       DATIRS010000282         2406 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1595492, whole genome shotgun sequence.
ACCESSION   DATIRS010000282 DATIRS010000000
VERSION     DATIRS010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2406)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2406)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2406
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1595492"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1065)
                     /locus_tag="VLM90_03525"
     CDS             complement(<1..1065)
                     /locus_tag="VLM90_03525"
                     /inference="COORDINATES: protein motif:HMM:NF012242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HSQ12055.1"
                     /translation="MSKAFGLDFGTTNSALALAHTDHAVELARFGAGSTFRSILYFEQ
                     DEASKSGNLRVVAGPDAIEAYLNARMPGRLIQSTKSYLASRLFSRTQIFNQSFSLEQL
                     IGTLLRYLRKSAEAQFGDLSGKLVVGRPVHFSGTKDSKDDDFAVARLRKAFASAGFDE
                     VHFLPEPVAAAYKYRQQLDHDELVLIADFGGGTSDFSLVNLQPAQTSTAELADQVIGN
                     DGVGIAGDTFDSKLVRYLVAPMLGLGSQYKTEFGKVSPVPNWLYEHLERWHYLSFLKT
                     RKNMELLKQIRFQALAPKKLDALIELVDQDLGYRLHQAIEAVKCGLSTQTSSQFHFKE
                     AAIDIEKSVERGDFELWIGAE"
     gene            complement(1215..2192)
                     /locus_tag="VLM90_03530"
     CDS             complement(1215..2192)
                     /locus_tag="VLM90_03530"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12056.1"
                     /translation="MMQRWSLLLGVVLISVLFAGSFAFAADAPARAKIRIATAAPSLS
                     YFPIYAAVQKGFFARRGFDVEMIQMAASLTAAALLNRSVDYTIIPSTIATAAARGAPA
                     KVIMFASVKLQHTLVVRADVNAISDLAGKKIAGSGFGNLVAYEIQFLIERYKLGPKTT
                     IINAPSSIDRLIAVQKGIAEAAIIAAPADIKGEEMGLKRLIQMGSLLQIPQAGLAATD
                     EKIKTNRGEVIEVLKAAIDGLEYTANQREDATALIGKWMALTPTQAVKAYDSVKDTYS
                     RDGVPTLEQSKAYIAMLAATAGLSADLPAATIFDFSLSAAAAKELAAKK"
     gene            complement(2195..>2406)
                     /locus_tag="VLM90_03535"
     CDS             complement(2195..>2406)
                     /locus_tag="VLM90_03535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12057.1"
                     /translation="LDRTYKQALEIVNRDPATPREALASTAGLMADLGLADRAAVTNT
                     PVESFYDNSYVDEIKQSGFLKELWR"
BASE COUNT          476 a          654 c          753 g          523 t
ORIGIN      
        1 ttcggcgccg atccacagct cgaaatcgcc gcgttcgacg gatttctcga tatcgatggc
       61 cgcttctttg aaatgaaatt ggctgctcgt ctgtgtcgat aagccgcatt taaccgcctc
      121 gatcgcttgg tgcaggcggt atccgagatc ctggtcgacc agctcgatca gcgcgtcgag
      181 ctttttcggc gccagggctt ggaagcgaat ctgcttgagc agttccatgt ttttccgggt
      241 cttaagaaac gacaggtagt gccagcgctc caaatgctcg tagagccagt tgggcacggg
      301 tgaaactttg ccgaactcgg tcttgtattg gctgcccaag cccagcatcg gcgccaccag
      361 atagcgcaca agtttactgt caaaagtatc gccggcgatg ccgaccccat cgttgccaat
      421 cacttgatcg gccaattcag ctgtcgaagt ttgcgccggc tgcaaattga ccagggaaaa
      481 atcgctggtg ccgccgccga agtcggcaat tagcacgagc tcgtcatggt cgagctgctg
      541 gcggtacttg taggcggcgg cgacaggctc gggcaggaaa tggacctcgt cgaagccggc
      601 gctggcaaac gctttgcgca agcgcgcaac cgcgaagtcg tcgtcctttg aatctttcgt
      661 gccactgaag tgaaccgggc ggccgaccac cagtttgccg ctgagatcgc cgaattgggc
      721 ttcggcggat ttgcgcagat agcgcaacag cgtgccgatc aattgttcca gggaaaaaga
      781 ttgattgaat atctgcgtcc ggctgaataa ccggctggcg agataagact tggtcgattg
      841 aatcaaccgt ccaggcatgc gcgcgttcaa atacgcctcg atcgcgtccg gcccggcgac
      901 cacgcgcagg ttgccgctct tcgaggcctc gtcttgctca aaatatagga tcgaacgaaa
      961 ggtcgagccg gcgccaaaac gggcgagctc cacggcgtgg tcggtgtggg cgagggccag
     1021 agcgctgttg gtagtgccga agtcgagacc gaatgctttg gacaagaaag tctccgtgga
     1081 attgctgcga atctcaacat cgtaacattc cgcgggtgat tgatgaacag ggcggggccg
     1141 taaggcgtaa agggtaatgg gtgaggcgac cggtcagaaa ccccttaccc ctcacgccta
     1201 accctttacc gttttcattt ttttgccgcg agttctttgg ccgcggcggc ggacagcgaa
     1261 aaatcgaaga tcgtcgccgc cggcaggtcg gcgctcaggc cggcggtggc ggcgagcatg
     1321 gcgatgtagg ctttactttg ttcgagcgtt ggcacgccgt cgcgggagta ggtgtctttg
     1381 acgctatcgt acgctttgac tgcttgagtt ggcgtgagcg ccatccattt gccgattaat
     1441 gcggtggcat cttcccgctg attcgccgtg tattccaaac cgtcgatggc ggctttgaga
     1501 acttcgatga cttcgcctcg gttggttttg attttttcgt cggtggcagc gaggccggcc
     1561 tggggaattt gcagcagcga gcccatctga atcaaacgct taagccccat ttcttcgcct
     1621 ttgatatcgg ccggagcggc gatgatggcg gcttcggcaa tgcctttctg cacggcaatc
     1681 aagcggtcga tggaggaggg cgcgttgatg atggtggtct tgggaccgag cttgtagcgc
     1741 tcgatgagaa actggatttc ataggcgacc aggttgccga agccgctgcc ggcgattttc
     1801 ttgccggcta aatcgctgat cgcattgaca tcagcgcgca cgaccagggt gtgttgcagt
     1861 ttcaccgagg cgaacatgat cactttcgcc ggcgcgccgc gggcggcggc ggtggcgatg
     1921 gtgctgggga tgatcgtgta atccaccgag cgattgagca gcgccgccgc tgttaaacta
     1981 gcggccattt gaatcatctc gacgtcgaag ccgcgccggg caaagaagcc tttctgcacc
     2041 gctgcgtaga tcggaaagta gctgagcgat ggggcggcgg tggcgatgcg gatcttggcg
     2101 cgcgctggag cgtcggcggc aaacgcgaac gatccggcga ataggaccga tattaaaaca
     2161 acacccagca gtaggctcca gcgctgcatc atcgctacct ccacagctct ttcaaaaagc
     2221 ccgactgttt gatctcgtcg acataactat tgtcgtagaa cgattccacc ggcgtgttgg
     2281 taaccgcggc gcggtcggca aggccgagat cggccatcag cccggcggtc gatgcgagcg
     2341 cttcgcgcgg ggtcgccgga tcgcggttga cgatttccag ggcttgcttg taggtacgat
     2401 cgagca
//
LOCUS       DATIRS010000283         3363 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_907244, whole genome shotgun sequence.
ACCESSION   DATIRS010000283 DATIRS010000000
VERSION     DATIRS010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3363
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_907244"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            226..1092
                     /locus_tag="VLM90_03540"
     CDS             226..1092
                     /locus_tag="VLM90_03540"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HSQ12058.1"
                     /translation="MLPIIFGLLTSLCFAVASLLAQRGYHIGPAPWGAWITIAANAAF
                     LLAGHWLIEGDTRIFIADNLIFVAVGLFVPGVTRVLSFRGIRTMGSSVTSTIVNTTPM
                     FSTVLAILILGERPSALVLGGVLLTVGGLITVSWGGEKVSYSKIELVSPFLCALLFSM
                     KDISVRWGLGGGGGQPILAAAIAALTSTVEIFLITRYAQGEKFALPRLPVLRWFVWSG
                     IFTGGAFLFMYIAFSLERVSIVAPLVNSYTVFVAILTPFMARQIERLTPHKLAGAALV
                     VAGIFAVSFGKD"
     gene            complement(1178..1528)
                     /locus_tag="VLM90_03545"
     CDS             complement(1178..1528)
                     /locus_tag="VLM90_03545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12059.1"
                     /translation="MLFIFASSCAGSRDETVGGVTVPVPGAMKKGAEKPVEVSFLGFG
                     AGQASFHGNMESAQLVEFYKKELPARGWQENMKLLSGGAMLAYSKDGKTLLIGISKEE
                     KDTVLSLSVGGVGK"
     gene            complement(1621..2802)
                     /locus_tag="VLM90_03550"
     CDS             complement(1621..2802)
                     /locus_tag="VLM90_03550"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12060.1"
                     /translation="MADSAHSFTREEIAPVITVSLISALRLLGIFLMLPIFSAYAVRY
                     PGASAALAGVAFGIYALIQCVFQIPLGWASDRWGRKPVLLVGLLLFSLGSIGCALATD
                     IYSLILARALQGTGAVGAVAFAVLADLTRPSVRAQAYTITGIAIGASFMIGLLAGPLL
                     AAQIGLNGLFYLLAGLGFLAMILTATSFPPDRRVTSAEAPMTFKAILAQEKLRPIFTA
                     TFVLSFTLNLFFFTYPLSWTEIGFDKAKLWQVYSIIFLPSVLLVFPYMRRAEKAGHFR
                     RPIMIGWFTATVGYAIYLVGANAQYELLLYVSGAAYFFGYSIYQPMLPAFLTQQVPAG
                     GRGTASGVYNSFGFIGSSLGGMLGGALSHISPALPEFVGVALLILWFFVGLPVAPEAN
                     S"
BASE COUNT          693 a          952 c         1029 g          689 t
ORIGIN      
        1 cacggtcttg acttgggttt gctgcagcat ggtctccgag atccagatgg cgtagggatc
       61 gcgcgtgtgg cgccagggta aatcgcgctg gttgtgtcga taccagttga gcagccggtg
      121 ccgcaaaaga gaaagattta cttcagccat gaatgcagtc gggcgggttt tcagttataa
      181 cgcactgtaa atgaaatcag cttcgaaggg aactcgctgc gcgccgtgct gccaatcata
      241 ttcgggctgt tgacttcact ttgcttcgcg gtggccagtc tgctggcgca acgcggctac
      301 catatcgggc cggcgccgtg gggcgcgtgg atcaccatcg ccgccaacgc cgcgtttctc
      361 ctggccggcc attggctgat cgagggcgac actcgaatat tcattgctga caacttgatc
      421 ttcgttgccg tcggcctgtt tgttcccgga gtcacccggg tgctgagctt tcgcggcatc
      481 cgcaccatgg gcagctcggt tacctccacc atcgtcaata ccacgccgat gttttccact
      541 gtgttggcga ttctcatcct tggcgagcgg ccgagcgcgt tggtccttgg cggcgtgctg
      601 ctgacggtcg gcgggctgat caccgtgtcc tggggcggcg agaaggtttc ctactcgaag
      661 atcgaattgg tgtctccgtt tctctgcgcg ttgctgttct cgatgaaaga tatttcggtg
      721 cgctggggcc tgggtggtgg cggcggccaa ccgatcctcg ccgcggccat cgccgcgctg
      781 acttctaccg tggagatttt cctgataacc cgttacgccc agggcgaaaa gttcgcgttg
      841 ccgcgcttgc cggtgttgcg ctggtttgtc tggtcgggga tttttaccgg cggcgctttt
      901 ttattcatgt atatcgcctt cagcctggag cgggtgtcga tcgttgcgcc gctggtgaac
      961 agctatacgg tcttcgttgc catcttgacg ccgttcatgg cgcgccagat cgagcgtcta
     1021 acgccgcaca aattggctgg cgccgctttg gtggtcgccg ggatttttgc ggtgtcgttc
     1081 ggcaaggatt agcgcgatgc agatgggtcg aagattgagt ttagaggatg gatgatcgca
     1141 agacccggac tacgattctc aatcctccat cgtcgattta tttcccgaca ccgccgacgg
     1201 acaaagacag gaccgtgtcc ttctcttcct tactgatgcc gatgagcagc gtcttgccgt
     1261 ccttgctgta ggcgagcatg gcgccgccgc tgagcagttt catgttttcc tgccagcctc
     1321 gcgccggcag ttccttcttg taaaactcga cgagctgggc gctttccatg ttgccatgaa
     1381 agctcgcctg gcccgcgcca aatcctagga acgagacttc caccggcttt tccgcgccct
     1441 tcttcatggc gcccggcacg ggaacggtca cgccgccgac ggtttcgtcg cgtgagccgg
     1501 cgcaggagct ggcgaatatg aacagcaaga ggacggcaag tgataaacgg caatgtgcgg
     1561 aattcaatct ccagcgcatt tgaacctcca gttaaattaa aacaccggca taccggtagc
     1621 tcacgaattg gcctccggcg ccaccggcag gccgacaaaa aaccacagga tcagcaaagc
     1681 aacgccgaca aattccggca gcgccggcga gatatggctc agggcgccgc cgagcatgcc
     1741 gccgagggac gagccgatga agccgaagga attgtaaacg ccgctcgccg tgccgcggcc
     1801 accggcgggc acctgctggg tgagaaacgc cggcagcatc ggttggtaga tgctgtaacc
     1861 gaagaaatac gccgcgccgc tgacatatag aagcagttcg tactgggcat tggcgccgac
     1921 cagatagatc gcgtagccca ccgtcgccgt aaaccagccg atcatgatcg gccggcgaaa
     1981 gtggccggct ttctcggcgc ggcgcatgta ggggaagacc agcaagacgc tgggcaggaa
     2041 gataatcgaa tagacctgcc aaagtttggc tttgtcgaaa ccgatttcgg tccagctcaa
     2101 cgggtaggtg aaaaaaaaca gattcaacgt aaaggaaagc acgaaggtgg ctgtgaatat
     2161 cggccgtagt ttttcttggg cgagaatcgc tttgaacgtc atcggcgctt cggcgctggt
     2221 gacgcgccgg tcggggggaa atgacgtggc ggtcagaatc atggcgagaa atcccagccc
     2281 cgccaatagg tagaacaaac cgttaaggcc gatctgcgcg gcgagcagcg gcccggcgag
     2341 caggccgatc atgaacgacg caccgatggc gatgccggtg atggtgtaag cttgagcgcg
     2401 cacgcttggg cgggtgagat cggcgagcac tgcgaaggcg acggcgccga ccgcgccggt
     2461 gccctggaga gcgcgcgcta gaatgagact gtatatatcg gttgccaagg cgcagccgat
     2521 actgccgagg ctaaaaagca gcagaccgac gaggagcacg ggtttgcgtc cccaacggtc
     2581 gctcgcccaa cctagcggaa tctggaagac acactgaatc agcgcgtaaa tgccgaaggc
     2641 gacgccggcg agggcggccg atgcgccggg gtagcgcacc gcataggcac tgaagatcgg
     2701 cagcatgaga aagatcccga gcaagcgcag cgccgagatc aagctgacgg taataaccgg
     2761 cgcgatctct tcgcgggtga aggagtgagc actgtcagcc aatgtgaagc gtaatctccg
     2821 atgccgttgg aatagaccgt taaattacat gctttgccgg aaataggaag agggcggtgc
     2881 tggatggcgg ccccgtaagc tgaggagatt ttttcaccac gaagtgtttc atgatcttac
     2941 gctcgtcgac agacaatgaa aatggatgga attccctttc ctatgctatc tgctcgactc
     3001 gtcattcccg cgcacgcggg aatccaggtt tggtctgcgc ccaattagcc tggatacccg
     3061 ctttcgcgag tgtgacggaa ttccgctgac ctcttcattt tgtcagacca tcgcctgaca
     3121 tgtattgtct caggagagcg cgaagagcac caaggttgcg gaagatgaca actccgaact
     3181 tcgcgctcgt cggtccttcg tggagatagt caacccagaa gaaccaggtg attgagtaag
     3241 atcatcccgc cccacccgag cagagcgacg cccaccggcg cgctcagttt gcggccccac
     3301 ggcaagttct tctccgcggc catcaccgcc ccgacgacca acatccaggc gacgttgccg
     3361 acc
//
LOCUS       DATIRS010000284         2125 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_907292, whole genome shotgun sequence.
ACCESSION   DATIRS010000284 DATIRS010000000
VERSION     DATIRS010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2125
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_907292"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..895)
                     /gene="trxB"
                     /locus_tag="VLM90_03555"
     CDS             complement(<1..895)
                     /gene="trxB"
                     /locus_tag="VLM90_03555"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HSQ12061.1"
                     /translation="MDKKSHYRVIILGSGAAGLTAAIYTARANLQPLVVEGSQPGGQL
                     TITTDVENFPGFPKGIMGPELMEEFKQQALRFGTETFFGEVTAVDLKQRPFKITASKE
                     NYTCDTLIVATGATAKLLGLESEMKLMGHGVSACATCDGFFFKDKELVVVGGGDTAME
                     EATFLTKFASKVTVVHRRDKLRASKIMQDRAEKNPKISFVWDTAVEDVFGDPKAGGVT
                     GVKFKNLKTGKTADFKCDGLFIAIGHEPNSKLFVGQLDLDPTGYILTHDGSKTNIPGV
                     FACGDVQDHVYRQAITAAGSGC"
     gene            943..1422
                     /gene="moaC"
                     /locus_tag="VLM90_03560"
     CDS             943..1422
                     /gene="moaC"
                     /locus_tag="VLM90_03560"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: protein motif:HMM:NF006870.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HSQ12062.1"
                     /translation="MAQLSHLDEQGRARMVDVSEKEVTSRIATARGTIFMRAETLALI
                     LDDKIEKGDVLSVARVAGIMAAKKTSELIPMCHPLNITSVEIELTPGKSPARVDIEAS
                     VRVSGKTGVEMEAMTAVSVAGLTIYDMCKAVDREMAIGEIRLVKKSGGKSGTFIRKE"
     gene            1547..2002
                     /locus_tag="VLM90_03565"
     CDS             1547..2002
                     /locus_tag="VLM90_03565"
                     /inference="COORDINATES: protein motif:HMM:NF036808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12063.1"
                     /translation="MLQLFLKPTRDVPIRRGHPWIFSGAIEHCEGDDQIVDVADIFDN
                     KKNWIGRGLYNPKSQLRVRLLTWKKETIDQSFFATRLAQALAFRSEQLGAANNAYRLI
                     NGEGDFLPGLIVDRYADYFVCQFYTAGMESFKKEIVAALSELVPMTGIF"
BASE COUNT          454 a          612 c          613 g          446 t
ORIGIN      
        1 tgcagccgct gcccgcagcc gtgatcgctt ggcgatatac gtgatcctga acatcaccgc
       61 aggcaaaaac cccggggata ttggtcttgc tgccgtcgtg cgtgagtatg taaccggtcg
      121 ggtcgagatc gagctggccg acaaatagtt tggaattggg ctcgtggccg atggcgatga
      181 acaggccatc gcatttgaaa tcggctgttt tgccggtttt gaggttcttg aatttgactc
      241 cagtcacgcc acccgccttg gggtcgccga agacatcttc cactgcagtg tcccagacaa
      301 aagaaatttt tgggttcttc tcggcgcgat cctgcatgat cttcgacgcg cgcaatttgt
      361 cgcgccgatg gacgacggtg actttactgg cgaacttggt gagaaacgtc gcctcttcca
      421 tcgcggtgtc accgccgccg accaccacga gttctttgtc tttgaagaaa aacccgtcgc
      481 aggtggcgca cgccgatacc ccatggccca tcagtttcat ctcggactcc aagcccaaga
      541 gcttggcggt cgcgcccgtg gcgacaatca gcgtgtcgca agtgtagttt tccttgcttg
      601 cggtgatttt gaatggccgc tgtttgagat cgacggcggt cacctcgccg aaaaaagtct
      661 cggtgccaaa acgcagcgcc tgctgcttga actcctccat cagctcaggt cccatgatgc
      721 ccttgggaaa gccgggaaaa ttctcaacgt cggtggtaat ggtcaattgc ccgccgggct
      781 gcgagccttc gacgaccagc ggctggagat tggcgcgggc ggtgtagatt gccgcggtga
      841 gaccggcggc gccggaaccg agaatgatta cgcggtagtg acttttttta tccatccggt
      901 ttctgtaaca taattttttc gagggagaaa gaaagcaaaa ctatggcaca actcagtcat
      961 ttggacgaac aagggcgcgc gcgcatggtc gacgtgagcg aaaaggaagt caccagccgc
     1021 atcgccaccg cgcgcggcac gatcttcatg cgcgccgaga cgctggcgct catcctcgac
     1081 gacaagatcg aaaagggcga tgtcttgtcg gtcgcccgcg tcgccggcat catggcggcg
     1141 aaaaagactt ccgaactgat acccatgtgc catccgctca acatcacctc cgtcgaaatc
     1201 gagctgacgc caggcaagtc tcccgcccgc gtcgacatcg aagcctcggt gcgcgtcagc
     1261 ggcaaaaccg gcgtcgagat ggaagccatg accgcagtgt cggtggcggg gctgaccatc
     1321 tatgacatgt gcaaagccgt cgaccgcgag atggccatcg gtgagatccg ccttgtcaaa
     1381 aaaagcggcg gcaaaagcgg cacgtttatc aggaaggagt aatggagtgc tggagtagtg
     1441 gagttttggg tcttccggaa cccggcactc cagtactcca ccactccatt tgtcactcgc
     1501 tcctggttca accgtcacgt tatacgctcg ggaactagag atctccatgc tgcaactatt
     1561 tctgaaaccc acccgcgacg tgccgatccg ccggggtcat ccgtggatct tctcgggcgc
     1621 catcgagcat tgcgaaggcg acgatcagat cgtcgacgtt gccgatattt tcgataataa
     1681 gaaaaactgg atcggccgcg gcctttacaa tcccaagtcg cagttgcgtg tgcgcctgct
     1741 cacctggaaa aaagaaacca tcgatcaaag cttctttgcc acccgcctgg cccaggcgtt
     1801 ggcctttcgc agcgagcaac tcggcgctgc caataacgcc taccggctga tcaatggcga
     1861 gggcgacttt cttccgggac tgatcgtcga ccgctacgcc gactacttcg tctgccagtt
     1921 ttatacggcg ggaatggagt cattcaagaa agagatcgtc gccgcgctgt cggagttggt
     1981 accaatgacg ggcatcttct agcgcagcga gggccgggtg cgcgaagaag aagggctgga
     2041 tacggccgtt ggcgtccttg ccggcacacc gccgccggag acgctcgcca ttcaggagaa
     2101 cggccaaaca tttctcgttg acatc
//
LOCUS       DATIRS010000285         1564 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_513495, whole genome shotgun sequence.
ACCESSION   DATIRS010000285 DATIRS010000000
VERSION     DATIRS010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_513495"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(234..1442)
                     /locus_tag="VLM90_03570"
     CDS             complement(234..1442)
                     /locus_tag="VLM90_03570"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12064.1"
                     /translation="MRTFSSLRHADFRYLWTGTVMMSAGQWVQQVTLGWLLYDLTGNS
                     VLLGALNGLRALPFLVTGPMAGVAADRMDRRKLLLATQWVLIATAVIFGGLVWSPYLH
                     VWHIFVFTLITGVAWTITEPVRMSLIPSAVPKDELANAVAINSGGFNMMKVIGPALGG
                     ALIAWVGAAENFFVKAVAYAGVLWMIYRMNFPPQRAEARHTSALANLKEGFAYVWSTP
                     AVFALMALAYVPRIFAVPYQTLMPVFQKDVLKIGPEGLGLLMAAPGIGAVMAILTLAS
                     MGNRIKRQGRFLVGSIFVLGAAIILFSQITWFPLALVMLVIVGMFQMFFLASTATMLQ
                     MIVPDELRGRVLSLYMLDRGFMPLGALFAGTSAHFLGAPTTVAIMGAIVIVLTALVAW
                     RIPAIRQLES"
BASE COUNT          382 a          433 c          472 g          277 t
ORIGIN      
        1 ctgaaactct tctgcggcca gcgcgaattg tgccgcgctg aaaactagac aaagtattaa
       61 agctaacaaa cgcattgaag tattcgctgg catggcttct cctcgtgaat gatctcgctt
      121 tgttacggtc cacctcaata ctccaagcag acaaaaatgt ccaggaaacc tccgaccctg
      181 tcggacgatt tgaacggctt gaacgttttg aacgactgga acggccttgg gttctaagat
      241 tccagttgtc ggatcgccgg gatgcgccac gcgaccagag cggtgaggac gatgacgatg
      301 gcgcccatga tcgcgacagt cgtgggcgcg ccgagaaagt gggcggaggt gccggcgaac
      361 agcgcgccca gcggcatgaa gccgcggtcg agcatataaa gactgagcac ccggccgcgc
      421 agttcgtcgg gaacgatcat ttgcagcatg gtggcggtgc tggcgaggaa gaacatctga
      481 aacatgccga cgatcaccaa catcaccaag gccagcggaa accaggtgat ctgcgagaac
      541 aggatgatcg cggcgccgag gacgaaaatg ctgccgacca aaaagcgccc ctggcgcttg
      601 atgcggttgc ccatcgacgc cagggttaaa attgccatca cggcgccgat accgggggcg
      661 gccatgagta agcccaatcc ttccgggccg atcttgagca cgtccttttg aaacaccggc
      721 atgagcgtct ggtagggcac ggcgaatatc cgcggcacgt aagcgagcgc catgagggcg
      781 aatactgccg gcgtcgacca gacataggcg aaaccttctt tgagattggc cagagctgaa
      841 gtgtgtctag cttcggcccg ctggggcggg aaattcattc gataaatcat ccatagcacg
      901 ccggcgtagg ccacagcttt gacgaagaaa ttttccgccg cgccaaccca ggcgatcagg
      961 gctccgccca acgccgggcc gatcactttc atcatattga agccgccgga attgatcgcc
     1021 acggcgttgg cgagttcgtc tttgggcacc gcactgggaa tcaaactcat gcgcaccggc
     1081 tcggtgatgg tccaggcgac gccggtgatc agggtgaaaa caaaaatatg ccagacatgt
     1141 aaatacggcg accagaccaa gccgccgaag atgacggcgg tggcgatcag cacccattgg
     1201 gtggcaagca atagtttgcg ccggtccatg cgatcggcgg cgacgccggc catcggtccg
     1261 gtgaccagga agggcagtgc gcgcagaccg ttaagcgcgc ccaacagcac tgaattgcca
     1321 gtgagatcgt agagcagcca gcccaaggtg acttgctgca cccactggcc ggcgctcatc
     1381 ataacggtgc ctgtccagag ataacgaaag tcggcgtggc gcaacgacga aaaggtgcgc
     1441 aagcgagagc gcggcggagt tgcgatagtt gagctatcaa gccgtggtgc tagttcatca
     1501 tccaagagtt tgtttcccaa gagcggatac taaagtgacg gttataaata agttgacaca
     1561 cccc
//
LOCUS       DATIRS010000286         2047 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1202617, whole genome shotgun sequence.
ACCESSION   DATIRS010000286 DATIRS010000000
VERSION     DATIRS010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2047
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1202617"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(188..961)
                     /locus_tag="VLM90_03575"
     CDS             complement(188..961)
                     /locus_tag="VLM90_03575"
                     /inference="COORDINATES: protein motif:HMM:NF024869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XdhC/CoxI family protein"
                     /protein_id="HSQ12065.1"
                     /translation="MSSLSEELVKIAEQGEAAVLVTIVEVQGDGQIQPGAKCLIRGGK
                     AQVETIGDANVVAALVRESDGHARAEKSQLVSLAIPDSTIKLEAFFEVMPAPPRLIVV
                     GAGHIAVPLVKMAKVLDFHVTVIDDRLLYANRERFPDADEVLTGDMAQMLKEMTLTAS
                     CYIVLITRGHAYDEPCLRNIIHSKAKYIGMIGSRRRIKACFQRFRDEEKVTEEAIERI
                     YAPIGLDIATETPAEIAVSILGEVIKIRRGGKAASLSGH"
     gene            complement(958..1353)
                     /locus_tag="VLM90_03580"
     CDS             complement(958..1353)
                     /locus_tag="VLM90_03580"
                     /inference="COORDINATES: protein motif:HMM:NF014662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XdhC family protein"
                     /protein_id="HSQ12066.1"
                     /translation="MAGPGACYTDADLEAKKKDTIYHQVNEFLAKGETVAVATIVSAK
                     GSTPREVGAKMVVTAWGEILGTIGGGCGEADVKREAIEVIRSRKPRTVRVDLLDDISS
                     DSPAVCGGIMNVFIDPWWQERDQEASSGK"
     gene            complement(1447..>2047)
                     /locus_tag="VLM90_03585"
     CDS             complement(1447..>2047)
                     /locus_tag="VLM90_03585"
                     /inference="COORDINATES: protein motif:HMM:NF017569.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HSQ12067.1"
                     /translation="MRRSMKYGGEVIEMAHRKRRIKKTKVVLLCDVSGSMDCYSRFLI
                     QFMYGLQNELWGVETFVFSTSLSRITHLIRTKNIVDALDKISGTILGWSGGTNIGRSL
                     HTFNRNFAPSMVTHRTVVVIISDGWDRGDVSLLEKEMQDIKRRAKKIIWLNPLLASEN
                     YEPLCKGMQAALPYLDLFLSVHNVNSLVALGRTLEKMVA"
BASE COUNT          414 a          623 c          559 g          451 t
ORIGIN      
        1 gccgccacac ccgagcgtct tcggcgccct tgggccggac attgagggtc gctggaaacg
       61 gatgatagcc aaggcgctca tttaacaaat cctgcaccca atcgagcgcc ataaacgatg
      121 acgcttgccc caagtcggaa aaaataattc cgctcaatcg ttccatcgtc gtcacgcgcg
      181 aaatagttta atggcccgat aacgatgcgg ctttgccgcc gcgccggatc ttgatcacct
      241 cgccgagaat cgacacagcg atttcggccg gcgtttcggt ggcgatgtcg aggccgatgg
      301 gcgcgtaaat gcgctcgatc gcctcctcgg tgactttttc ttcatcgcgg aaacgctgaa
      361 agcacgcctt gatgcgccgc cggctgccga tcatgccgat gtacttggct ttgctgtgaa
      421 tgatgttgcg caggcagggc tcgtcgtaag catgaccgcg ggtaatcaag acgatatagc
      481 aggacgccgt gagggtcatt tccttgagca tctgcgccat gtcgccggtc aagacttcgt
      541 cggcgtcggg gaagcgttcg cggttggcgt agagcaaacg gtcatcgatc acggtgacgt
      601 gaaaatcgag caccttggcc atcttcacca gcggcacggc gatatggccg gcaccgacga
      661 cgatcagcct gggcggcgcc ggcatgactt cgaagaacgc ttcgagcttg atcgtgctgt
      721 cggggatcgc cagcgaaacc aactgcgatt tttccgcccg cgcatggccg tcgctctcgc
      781 gcaccagggc ggccaccacg ttggcgtcgc cgatcgtttc cacctgcgcc ttgccgccgc
      841 ggatcagaca cttggcgccg ggttggattt gcccgtcgcc ttgcacttcg acaatggtca
      901 ccagcaccgc cgcttcaccc tgctcggcga tcttgactaa ctcttcggac agtgaactca
      961 tttgccgctt gacgcctcct gatcgcgttc ctgccaccag ggatcgatga agacattcat
     1021 gataccgccg caaaccgccg ggctatccga ggaaatatcg tcgagcaagt cgacgcgcac
     1081 ggtgcgcggc ttgcgcgagc ggatcacttc gatcgcttcg cgtttgacat cggcctcgcc
     1141 gcagccgccg ccgatggtgc ccaagatttc accccaagcg gtcactacca ttttggcgcc
     1201 gacttcgcgc ggcgtcgagc ccttggccga gacgatggtc gccaccgcga cggtctcgcc
     1261 cttggcgaga aactcgttga cctgatgata gatcgtatct ttctttttcg cttctaaatc
     1321 cgcgtccgtg taacaagcgc cgggtccagc catgtgagta cctcctcagt tgggtcgacg
     1381 atggaagatc gagaatcgaa gatggcgatc ctctatcctc gatcctctat cttcggttct
     1441 gataaatcac gccaccattt tctcgagtgt ccgccctaac gcaaccaaac tattgacgtt
     1501 gtgcaccgac aaaaacaaat ccaaatacgg cagcgccgct tgcatgcctt tacagagcgg
     1561 ttcgtagttc tcgctcgcta gcaaaggatt gagccagatg attttcttgg cgcgccgttt
     1621 gatgtcctgc atttcttttt ctaacaaact aacatcgccg cggtcccaac cgtcgctgat
     1681 gatcaccacc accgtgcggt gcgtcaccat gcttggcgcg aaattgcggt tgaaggtgtg
     1741 cagcgagcgg ccgatattgg tgccgccgga ccagccgaga attgtcccgg aaatcttgtc
     1801 caaagcatcg acgatattct tggtgcggat caaatgggta atccggctga gcgaggtgct
     1861 aaaaacgaac gtctcgacgc cccatagctc attttgcaaa ccgtacatga actgaatcag
     1921 gaaccggctg taacaatcca tcgagccgct gacatcgcac aggagcacga ctttggtttt
     1981 cttgatgcgc cgcttgcggt gcgccatctc gatcacttca ccgccgtatt tcatgctgcg
     2041 ccgcatg
//
LOCUS       DATIRS010000287         1848 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_317566, whole genome shotgun sequence.
ACCESSION   DATIRS010000287 DATIRS010000000
VERSION     DATIRS010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1848)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1848)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1848
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_317566"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..804)
                     /locus_tag="VLM90_03590"
     CDS             complement(<1..804)
                     /locus_tag="VLM90_03590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12068.1"
                     /translation="MKRIADSFPLFALVAMLVTSTAQAAERPYYQGKTVTFFINFSAG
                     GPTDIEGRIVARHLARFVPGSPTIVVQNMSGGGGVTGINFLGERAKPDALTLGYFTGP
                     YNHQMMKSSTLRVDLMKVPYIASVSGVTVCYIRSDVPPGIKKPTDIIKADRFRAGGLS
                     FDSNKDLRFRLAFDVLGVKYDYVTGYNSSNDARLAVQRNEIQYHDENIPGYRGVVEPQ
                     MVKTGMVTPLYYHDVIAPDGTMRKSPDYPELSSFTEVYTQIHGKAPSGIK"
     gene            complement(823..>1848)
                     /locus_tag="VLM90_03595"
     CDS             complement(823..>1848)
                     /locus_tag="VLM90_03595"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12069.1"
                     /translation="EFPILQYSITPTEIGSMLKSFSIAILLVLVLPLVGAAQSKIKFP
                     YSITSKSLGYGPMLASAKLGFMDREDLEPQLVYVRGADKSLAAVLSGSVYVSASGADA
                     HIAAVERGVDLSMIGGTINGLSQVIMTTKQFQTLNDLRGKIIGATSATSGLGFALRRY
                     MKGKGFEFGRDYQILATGSAGPTLAALAAGQVQAAALGVPLNFIAADQGFHGVGRIVD
                     VIPSYQFGAFTVSRPVAEKNRPLMVRFMRAMISVHRWFYANKEAAVAFMAKELDMTPD
                     YARRGWEYYVEHKIWPIDASVNIEGMNVATQIYWEASQSKGAAPSGSKYIDQSFQKEA
                     LKELAGR"
BASE COUNT          410 a          569 c          487 g          382 t
ORIGIN      
        1 tttgatcccg ctcggcgctt tgccgtgaat ttgcgtataa acctcggtaa aagagctgag
       61 ttcgggataa tcggggctct tacgcatggt gccatcgggt gcgatcacgt cgtgataata
      121 aagcggcgtc accataccgg ttttgaccat ctgcggctcg accacgcccc tgtaccccgg
      181 aatgttttcg tcatggtact gaatctcatt gcgctgcacc gccagccgcg cgtcgttgct
      241 gctattgtag ccggtgacat aatcgtactt gacgccaagc acgtcaaagg ccaagcgaaa
      301 gcgcaagtcc ttattgctat cgaaggacaa accgccggcg cgaaaacggt cggccttgat
      361 gatatcggtc ggtttcttaa tacccggcgg cacatccgag cgaatgtagc acaccgtgac
      421 acccgagact gacgcgatat aaggcacctt catcagatcg acgcgcaagg tcgagctttt
      481 catcatctgg tgattatacg gcccggtaaa gtaacccaag gtcaacgcat cgggcttggc
      541 tcgttcaccg agaaagttga tgccggtgac accgccgcca ccggacatgt tctgcacgac
      601 gatggtcgga ctaccgggaa cgaagcgcgc caagtgccgc gcgacaatgc gcccttcgat
      661 gtccgtcggc ccgccggcac tgaaattgat aaagaaggtg accgtcttgc cctgataata
      721 gggccgctcc gccgcttgag ctgtcgacgt tacgagcatc gcgaccaacg cgaacaaggg
      781 aaaactatct gcaatccgtt tcatttagct acctccttca ggtcaacgcc cagccagttc
      841 cttaagcgct tctttttgaa aactctgatc tatatacttg ctcccgctcg gcgccgctcc
      901 ctttgactgc gacgcttccc aatagatctg cgtcgccaca ttcatgccct cgatattcac
      961 gctggcgtcg atgggccaaa tcttatgctc gacgtaatac tcccagccgc gccgtgcgta
     1021 atccggcgtc atgtccaact ccttcgccat aaacgccacc gccgcttcct tgttagcata
     1081 aaaccagcgg tgcaccgaaa tcatcgcgcg catgaagcgc accatcaacg gccgattttt
     1141 ctccgctact gggcgggaaa ccgtgaacgc gccgaactgg tagctcggga taacgtcgac
     1201 gatccgaccg acgccgtgaa aaccctgatc ggcggcgata aagttcaacg gcacccccag
     1261 cgccgccgcc tgcacctgcc ccgccgccag cgccgccaag gtcggcccgg cgctgccggt
     1321 ggcgaggatc tgatagtcgc ggccaaattc aaagcctttg cctttcatat atcggcgcag
     1381 ggcaaagccc aagccggagg tcgcactggt agcgccgatg atcttaccgc gtaagtcgtt
     1441 gagcgtttgg aattgtttgg tcgtcatgat gacctgcgac aagccattga tggtgccgcc
     1501 gatcatcgac agatcgacgc cgcgctccac cgcggcgata tgcgcatccg cgccggaggc
     1561 cgacacatag actgaaccgc tcagcacagc cgcgagagat ttgtccgcgc cgcgcacgta
     1621 aaccagctgc ggctccaaat cctcccggtc catgaatccc agcttagccg acgccaacat
     1681 cggcccatag ccgagactct tgctggtaat gctgtaggga aacttgatct tggattgagc
     1741 tgcgccaacc aacggtagaa ccaacaccag cagaatcgcg atcgagaagc ttttcagcat
     1801 actgccaatc tctgtgggag taatggagta ctggagtatt gggaattc
//
LOCUS       DATIRS010000288         1982 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_22403, whole genome shotgun sequence.
ACCESSION   DATIRS010000288 DATIRS010000000
VERSION     DATIRS010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1982)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1982)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1982
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22403"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..449
                     /locus_tag="VLM90_03600"
     CDS             <1..449
                     /locus_tag="VLM90_03600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12070.1"
                     /translation="DVKATMAESAHEEMIHAQLLSKRIRDLGAEPFDYKPLPAQIAMF
                     NAMEGLNETCERIAGFSLAGETVANHLIQLCLNSPDVPEWIKQPYRKITEDEEGHGSV
                     PQLFLKRYATTEERQDRVRRAVAMRMVLFREYLASLDRWAMGQDRW"
     gene            543..1475
                     /locus_tag="VLM90_03605"
     CDS             543..1475
                     /locus_tag="VLM90_03605"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HSQ12071.1"
                     /translation="MKILFFDDFNLGVLKGDAVVDVSAVTNDIPHTAPHNLISGLIER
                     FADYRGALEKATAAGTGVPLKSVRIRSPLPRPVNIDCMAVNYMEDGTRKEPAPINAFH
                     KSPNSIIGDGDTMILPDVPAPIFEGEAELALVIGRHADNVPAGQAMDYVFGYVNFIDG
                     SARGLPPAGNTFYQMKSRATFAPTGPFIVTADEIKDPHNLQVRLWNNGVLMQNYSTSD
                     MAHKIPRCIEWVSSIHPMEPGDILALGTNHRGLNPFQDGDVIEIETEPLGRLHVKIRD
                     DLKRTWARETRLQRQEKGLEGFTAQLTGKYAQTV"
     gene            1625..>1982
                     /locus_tag="VLM90_03610"
     CDS             1625..>1982
                     /locus_tag="VLM90_03610"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSQ12072.1"
                     /translation="MKTTKKALKASNRQSSRGSIDRPENLGTPQMKWGSDVVAETTRR
                     LNLKYIALVPGASYRGFHDSIVNYLGNDNPQMVICLHEEHAVSIADGYGKVTETPMAV
                     ALHANVGLLHATMPIFN"
BASE COUNT          441 a          537 c          589 g          415 t
ORIGIN      
        1 tcgacgtcaa agcgaccatg gccgaatcgg cgcatgaaga aatgatccac gcgcagctct
       61 tgagcaaacg catccgcgat cttggggctg agccgttcga ctacaagccg ctgccggcgc
      121 agatcgcaat gttcaacgct atggagggtt tgaacgagac ctgcgagcgg atcgccgggt
      181 tttcgctggc gggcgagacg gtcgccaatc atctgattca gctatgtctt aactcacccg
      241 atgttcccga atggatcaag cagccctatc ggaagatcac cgaagatgaa gaagggcatg
      301 gcagtgtgcc gcagctgttt ctcaagcgct atgcaacgac tgaagaacgc caagaccgcg
      361 tgcgccgggc ggtcgccatg cgcatggtcc tattccgtga atatctggcg agcctggacc
      421 gctgggcgat gggtcaggat cgctggtaag ctgcttcgcc ttcttttctc aatagatctc
      481 ttttccgctt gttgtcgcgc ctgcttctcg gctttatctc ttaggatgaa tttggaggag
      541 tcatgaaaat tctgtttttc gacgatttta atctcggtgt gctcaaaggc gatgctgtcg
      601 ttgatgtgtc ggcggtgaca aacgatattc ctcataccgc gccgcataat ctcatcagcg
      661 gcttgatcga acgcttcgcc gactatcgcg gcgcgctcga aaaggcgacg gctgcgggaa
      721 ccggtgtgcc gctaaaaagc gtgcgcattc gttcgccgtt gccgcggccg gtgaatatcg
      781 actgcatggc ggtaaactac atggaagacg gcacgcgcaa agagccggcg ccgatcaatg
      841 cttttcataa atcgcccaac tcgatcatcg gcgatggcga taccatgatc ctgcccgatg
      901 tgccggcgcc gatcttcgaa ggcgaggctg aactcgcctt ggtgatcggc aggcatgccg
      961 acaatgtgcc ggcggggcag gcgatggact atgtcttcgg ctatgtgaat ttcatcgacg
     1021 gttcggcgcg cgggttgccg ccggcgggca atacgtttta ccagatgaaa tcgcgggcga
     1081 ccttcgctcc taccgggccg tttatcgtca ccgccgatga aatcaaggat ccgcacaatc
     1141 ttcaggtgcg gctgtggaac aatggcgtgt tgatgcagaa ctatagcacc agcgacatgg
     1201 cgcataagat tccccgctgc atcgaatggg tcagctcgat ccacccgatg gagcctggcg
     1261 atatcctggc tctgggcacg aaccaccgcg gcctcaatcc gtttcaagac ggcgatgtca
     1321 tcgagatcga aaccgaaccg ctcggccgcc tgcatgtcaa gatacgcgac gatctcaaac
     1381 gcacctgggc gcgcgagacc cgtttgcagc gccaggaaaa agggttggag gggttcacgg
     1441 cgcagcttac cggcaagtat gcgcagacag tgtgagaaaa cgttatgttg acgtcgagca
     1501 gcgttggaca ataactgtgc tatcggttat gtccgccgaa ttaccgttcg gcgcgggaac
     1561 ggcgcgtccg ttgcccggaa tttaatgaat attgaacagg aagccgatcg aaagaggaga
     1621 gatgatgaaa accacgaaaa aggcgctcaa ggcgagcaac cgtcagtcaa gccgcggcag
     1681 catcgaccgg ccggaaaatc tcggcacgcc gcaaatgaaa tggggcagtg atgtggtcgc
     1741 cgagacgacg cgccggctca atcttaaata catagcttta gtgccggggg cgagctaccg
     1801 cggttttcac gacagcatcg tcaattatct tggcaatgat aatccccaga tggtgatttg
     1861 ccttcatgaa gagcatgcgg tgtccatcgc cgacggttac ggcaaggtga ccgagacgcc
     1921 gatggcggtg gcgctgcatg ccaacgtcgg tttgctgcat gcgaccatgc cgatttttaa
     1981 cg
//
LOCUS       DATIRS010000289         2646 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_219448, whole genome shotgun sequence.
ACCESSION   DATIRS010000289 DATIRS010000000
VERSION     DATIRS010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2646
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_219448"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1348)
                     /locus_tag="VLM90_03615"
     CDS             complement(<1..1348)
                     /locus_tag="VLM90_03615"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSQ12073.1"
                     /translation="MKTNPMLKVVGTNAHRVDAIEKVSGKAVYTSDIQLPGMAYARIL
                     RSPVAHARLVKVDASKAKELPGVIATLTRDDIQGFNFKYGATYKDQSIVAVDKVRYVG
                     DPVAAVLADTPEIAEQALELIEVEYDELAKVTNLEEAMAPGAIQVHEGGVARAELRGS
                     TYGAPERFNGTNICYYLTFGREAVDKGFAQAEHIFEDTFRFQKVQHFSLEAHNNVAYY
                     DGEKLTMWASCQDPCTLRDHLSGIFRLPCNRIRVIVPYVGGGYGGKLYVKAEPISAAL
                     SWMTRRPVKLQLSINESFKTVTRHAARVTVKTGVTKDGKLIARDCQVYMDTGAYADAG
                     PRVTQKAGYRALGPYRLPYAKVEAHGVYTNTVPAGAFRGFGALQVTWAYESQMDMIAD
                     RLGIDPLEFRINNLLKKGDLYTVGDTPVDCDMEEGLRKVADAIKWTEKSAKPNRAKG"
     gene            complement(1760..>2646)
                     /locus_tag="VLM90_03620"
     CDS             complement(1760..>2646)
                     /locus_tag="VLM90_03620"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ12074.1"
                     /translation="FKDYEDNNMEMPVATVLGHNPAFHMGACYSGPFEVSEYDVIGGY
                     MGEPLRLVASETFGDDLLIPADAEVVIEGVLKPGGRVVEGPFGEAPGYLGPQRYTTCV
                     HFEVRAINYRNGAMYQSVITPEGDKPWMDLPREGAYLRRCREAVPGVTAVCKQGRHAH
                     YNVFISMKKMSEGDPARAAAAALTFDHTKNVFVFDEDIDVFNPTDILWAFATRVQPHL
                     QVNILKPLFRGNFLDPSLRDEIKTSGMIVDATKPTDRPFSPVSKCPDEAMARIKLEDY
                     VPGEVLQHIPMDRTTYWA"
BASE COUNT          508 a          764 c          786 g          588 t
ORIGIN      
        1 aacctttggc tcgattgggt ttggcactct tctcggtcca cttgatggcg tcggcgactt
       61 tgcgcagccc ctcttccatg tcgcaatcca ccggggtatc gccgacggta tagagatcgc
      121 ccttcttgag gagattgttg atgcgaaatt ccagcggatc gatgcccaag cggtcggcga
      181 tcatgtccat ctgcgattca taggcccagg tcacttgcag cgcgccgaaa ccgcgaaacg
      241 ccccggccgg caccgtgttg gtataaaccc cgtgcgcttc tactttggca tagggaagtc
      301 ggtatgggcc caaggcgcga tagccggcct tttgcgtaac ccgcggtccg gcatcggcat
      361 aggcgccggt gtccatgtag acctggcaat cgcgggcgat aagtttgccg tccttggtca
      421 cgccggtctt aaccgtgacc cgggccgcat gacgcgtgac ggtcttgaag ctctcgttga
      481 tcgacagctg cagcttcacc ggccggcggg tcatccagga gagcgccgcc gaaatcggct
      541 cagctttgac ataaagcttg ccgccgtaac cgccgccgac atagggaacg atgacgcgga
      601 tgcggttgca aggcagacga aaaattcccg acagatgatc gcgcagggta cacggatcct
      661 ggcacgacgc ccacatcgtc agcttttcgc cgtcatagta ggcgacgttg ttatgcgctt
      721 cgagggagaa atgctggacc ttctgaaagc ggaaggtgtc ctcgaaaata tgctcggcct
      781 gggcgaagcc tttgtcgacg gcttccctgc cgaaggtcag gtaataacag atgttggtgc
      841 cattgaagcg ctccggcgcg ccgtaggtcg aaccgcgcag ctcggcgcgc gccacgccgc
      901 cttcatggac ttgaatagcg ccgggagcca tcgcctcttc gaggttggtg actttggcga
      961 gctcgtcgta ttcgacttcg atcagttcca gcgcttgctc ggcgatctcc ggcgtgtcgg
     1021 ccaacaccgc cgccaccgga tcgccgacgt agcgcacctt gtcgacggca acgatggatt
     1081 gatccttgta agtcgcgcca tatttgaagt tgaagccctg gatgtcgtcc cgcgtcaagg
     1141 tcgcaatgac gccgggaagt tctttggctt tggaggcgtc gaccttgacc aaccgggcgt
     1201 gagcgaccgg gctacgcagt atccgcgcat aggccatgcc cggcagctgg atatcgctgg
     1261 tgtagaccgc cttgccgctg actttttcaa tggcgtcgac tcgatgcgca ttggtgccga
     1321 cgaccttcaa cattggattc gtcttcatgg tgtgagcgga aaaaaaacgc cacggtggaa
     1381 ctgtcaccgt ggccacggac cgaagttatt tgcggatttt gggactgtct ttttcgggga
     1441 aatatttgtc gcagaagggg caatggaaat tcattcccga ccccagcata tgcgggttga
     1501 cgacaaagat tttcttacaa tctggacaag tgatttcaac ggcctgaccc ataatttacc
     1561 tctctctagc tattttggat tttcgatttt cgattttgga ttggcggatc tgagcaccta
     1621 ggcaagccgc gcagcgtgcc caagattcct tttgcgtcct atgcgttctt tgcggccaat
     1681 ccctgagtta gccggggccg ataataccgg ccccgacttt gtgatctttg tgccctttgt
     1741 ggttaaatcc cctattctgc tacgcccagt aggtcgtccg gtccatggga atatgctgca
     1801 agacttctcc aggcacatag tcttccagct tgatccgcgc catcgcttcg tcggggcatt
     1861 tcgacaccgg cgagaatggc cggtcggtcg gtttggtcgc atcgacgatc atgcccgagg
     1921 tcttgatctc gtcgcgcagc gacggatcca ggaagttgcc gcggaacagc ggcttcaaaa
     1981 tattgacctg gagatgcggc tgcacccggg tcgcgaacgc ccagagaatg tcggtgggat
     2041 tgaatacgtc aatatcctca tcgaacacga agacattctt ggtgtgatcg aaggtcagcg
     2101 cggcggcggc ggcgcgcgcc ggatcgcctt cggacatctt cttcatcgag atgaaaacat
     2161 tgtaatgggc gtggcggccc tgcttacaga cggcggtgac gccgggcacg gcctcgcggc
     2221 agcggcgcag gtaggcgcct tcgcgcggca gatccatcca cggcttatcg ccttccggcg
     2281 tgatcaccga ctgatacatg gcgccgttgc gatagttgat ggcgcgcact tcaaagtgca
     2341 cgcaggtggt gtagcgctgc ggcccgagat agcccggcgc ttcgccgaag ggaccttcga
     2401 ccacacggcc gcccggtttg agcacgcctt cgatgacgac ttcggcgtcg gcgggaatga
     2461 gcagatcgtc gccgaaagtt tctgacgcga ccaagcgcag cggttcgccc atgtagccgc
     2521 cgatcacgtc gtactcgctc acttcaaacg ggccgctgta gcaagcgccc atgtggaagg
     2581 ccggattatg gcccaatacc gtggccaccg gcatctccat gttgttgtct tcgtaatctt
     2641 taaaga
//
LOCUS       DATIRS010000290         1527 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_711453, whole genome shotgun sequence.
ACCESSION   DATIRS010000290 DATIRS010000000
VERSION     DATIRS010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_711453"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(132..>1527)
                     /locus_tag="VLM90_03625"
     CDS             complement(132..>1527)
                     /locus_tag="VLM90_03625"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSQ12075.1"
                     /translation="EIIADLDLKRHGLELLALDPLLFAPALGGDSLQILRDSAKAAAE
                     IERHSKGDANEYPAFCALAKQLATFLRTLYGMQLPDKANPGDFNPAQLLKIGWKFHRL
                     GKREMYEFLRILPMSAADLLNEWFENDLLKAALAGCSMLASFVGPRQQGTAFNMLHHQ
                     LGESNGALRTAGFVRGGIGNLTQALARAAQQFGAEIRTGKAVAKIVTKNGAATGVVLD
                     DGDEIGATSVISNADVKRTLLKLVEPTYLDPHFLLQVRNIRSRGTVAKINLALDTLPK
                     FKNSNNDAAALGGIIHIGPTVDYLERAADDAKYGRFSSQPFLEITIPSIADPTLAPTG
                     KHVMSVWMQSAPYMLRESNWHEQRDALGDTVVKAIEDYAPGFTNSILHRQALTPLDLE
                     ETYGLSGGHLYHAEMALDQIFFMRPVPGWSRYHTPIENLYLCGSGTHPGGGLTGIPGY
                     YAAREILKSMRKAK"
BASE COUNT          300 a          410 c          480 g          337 t
ORIGIN      
        1 cggtcttctt gccagccagt acgccttgtc acccgacggc gcggataagt gtgtcaccgt
       61 cagttcatct ttgtcgagtt ttaacgtttc ggaataagcc atttgcactt gataatagca
      121 cagggaagta attatttcgc cttgcgcatg ctcttgagaa tttccctggc tgcgtagtag
      181 ccgggaatgc cggtgaggcc gccgccgggg tgtgtgcccg agccgcagag ataaaggttc
      241 tcaatcggcg tatggtagcg cgaccaaccg ggaacgggac gcatgaagaa aatctgatcc
      301 agggccatct cggcgtgata gaggtggccg ccggagaggc cgtaggtttc ttcgaggtcc
      361 aaaggtgtca aagcctggcg gtggaggatc gaattcgtaa atccgggggc gtaatcttcg
      421 atggccttca caaccgtgtc gccgagcgcg tctcgctgct cgtgccaatt gctttcccgc
      481 agcatatacg gcgccgattg catccagact gacataacgt gcttgcccgt cggggcgagg
      541 gtcgggtcgg cgatcgaagg aatggtgatt tccaaaaatg gctggctcga gaaccgcccg
      601 tatttggcgt catcggcggc gcgctccaga taatccaccg tcgggccgat gtgaatgatg
      661 ccgccgagcg cggccgcatc attgttcgag ttcttgaact tcggcagagt gtcgagggcc
      721 agattgatct tagccactgt gccgcgcgaa cggatgtttc ggacttgcag caaaaagtgc
      781 ggatcgagat acgtcggctc cacgagtttg agtagtgttc gcttcacgtc ggcgttcgat
      841 attacgctgg tcgcgccgat ttcatcgcca tcgtccagaa cgacccctgt cgccgcgccg
      901 ttcttggtga cgattttcgc cactgctttg ccggttcgga tctccgcgcc gaactgctgc
      961 gcggcgcggg cgagagcttg ggtaagatta ccgataccac cgcggacgaa gccggctgtg
     1021 cgcagcgcgc cgttggattc gccgagttgg tgatgaagca tgttgaaagc ggttccctgc
     1081 tggcgcggtc cgacgaagga agcaagcatg ctgcagccgg cgagcgcagc tttgagcagg
     1141 tcattttcaa accattcatt cagcaggtcc gcagcgctca tcggcagaat gcgcagaaat
     1201 tcgtacattt cccttttgcc gaggcgatgg aatttccagc caatctttag tagctgggca
     1261 ggattgaaat cgccgggatt ggccttgtcg ggaagctgca tgccgtaaag tgtgcggagg
     1321 aacgtagcga gttgcttggc gagagcgcag aacgccggat attcgttcgc gtcgcccttc
     1381 gagtggcgct cgatctccgc tgctgccttg gcagaatcgc gcaggatttg cagcgagtcc
     1441 ccgccgagcg cgggcgcgaa cagcaaagga tcgagggcga gcaactcaag gccatgcctt
     1501 ttcagatcga gatcggcgat gatttcg
//
LOCUS       DATIRS010000291         2329 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1104736, whole genome shotgun sequence.
ACCESSION   DATIRS010000291 DATIRS010000000
VERSION     DATIRS010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2329)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2329)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2329
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1104736"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            96..713
                     /locus_tag="VLM90_03630"
     CDS             96..713
                     /locus_tag="VLM90_03630"
                     /inference="COORDINATES: protein motif:HMM:NF013052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SET domain-containing protein-lysine
                     N-methyltransferase"
                     /protein_id="HSQ12076.1"
                     /translation="MTIKLILSSLGSLLLTWSLWLAVVTAADEEKPPRLVPVLKIDEG
                     LDKRTAIRPSLIPGGGNGLYAAVAIKQGDVIGMLGGQLRTDEDYPPGNYYLASIPECA
                     WEETKPYKYLDAKHFGAHVSRINFAPKSINGIETGLQNAGLRQLCNYPYVIFVALRDI
                     EVGTEIWASYGPHYPYDQFMYEPAVRDFFCNQAKIDCRERFSFEP"
     gene            731..1528
                     /locus_tag="VLM90_03635"
     CDS             731..1528
                     /locus_tag="VLM90_03635"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12077.1"
                     /translation="MEVIDIHHHLGALNGGSLQQGDGWQDRDYANRVRIMDANGVNGA
                     AILAATGYIQADGIKDTMRSNDVVAAYRQRDPKRFPIACGIVEPLHGARSLGELERMK
                     RELALDGVVWHSRFQGVAVDHQLMRPLLKKVQELGLVPLIHTNAESNLEAVWRLERLA
                     LEFPDLTFISLDALTTNTNSQLALDIAKRTKNIIFDSAHVRGPGYVKNFVEAVGSERM
                     VFGSLFYSHPASYDHCVTLEEIKAAKISDADKANILAGNVKRIFQLK"
     gene            1596..2204
                     /locus_tag="VLM90_03640"
     CDS             1596..2204
                     /locus_tag="VLM90_03640"
                     /inference="COORDINATES: protein motif:HMM:NF013052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SET domain-containing protein-lysine
                     N-methyltransferase"
                     /protein_id="HSQ12078.1"
                     /translation="MAKFLVLFGITVMGQWLLPHSLLLSAESSNKEFPLLKINRALDK
                     RTVIKPSAIPNGGNGLYALVPIKKGEVIGELGGRLLPADKYPQGNHYIAALLECAQKQ
                     AHPYVYLDSKDNGANVSRINFAPSKINGIDTNFQNSAIRRLCQPPYFEFYALRDIPAG
                     EEIFSSYGPNYDYDRFMHQPDVKQYFCKRAKIDCRTNYSFDH"
BASE COUNT          528 a          633 c          663 g          505 t
ORIGIN      
        1 gttggcgcca ctgtcaacgc aagagcgcgg ataatttgac atcgtagtgg cggcatgatt
       61 cgtagagtgt tcagacagtg taaattttgc tgaccatgac cataaaatta attttatcga
      121 gcctgggctc gctgcttttg acctggagtc tttggcttgc cgttgtcacg gcagccgatg
      181 aagagaagcc gccccggctg gtgccggttc tcaaaatcga cgaggggctg gataagcgca
      241 cggcgatcag gccttcgctg attcccggcg gcggtaacgg cttgtacgcc gccgtggcga
      301 tcaagcaggg cgatgtcatc ggcatgctcg gcggccaact gcgcacggat gaagattatc
      361 cgccgggcaa ttattatctg gcgtccatcc cagaatgcgc ctgggaggag accaagccgt
      421 ataagtatct cgatgcgaaa catttcggcg cccatgtcag ccggatcaat ttcgccccga
      481 agagcatcaa tggcattgag actggtttgc aaaatgccgg gttgcgccag ctgtgcaatt
      541 atccttacgt gatcttcgtc gcgctccgcg atattgaagt agggaccgag atctgggcga
      601 gctacgggcc gcattatcct tacgatcagt tcatgtatga accggcggta agagattttt
      661 tctgcaacca ggcgaaaatc gactgccggg aaaggtttag ttttgagccc taaatggctg
      721 aggaggcgat atggaagtta tcgatattca tcatcacttg ggcgcgctca acggcggcag
      781 cttgcagcaa ggcgacggtt ggcaggatcg tgactacgcc aatcgcgtgc gcatcatgga
      841 cgccaatggc gttaatggcg cggcgattct ggcggcgacc ggatatatcc aagcggacgg
      901 catcaaagac accatgcgct ccaacgatgt cgtcgccgcc tatcgccaac gcgaccccaa
      961 acgttttccg atcgcctgcg gcatcgtcga gccgctccac ggcgcccgct cgctaggcga
     1021 attggagcgg atgaagcgtg agctcgctct cgacggcgtg gtctggcata gccgcttcca
     1081 aggcgtcgcc gtggatcatc agctgatgcg gccgctgctc aaaaaggttc aagagctcgg
     1141 tctcgtgccg ctgattcaca ccaacgccga atccaatctc gaagcggtgt ggcgcttgga
     1201 acggctggcg ttagagtttc ccgatctgac cttcatctcg ttggacgcgt tgaccaccaa
     1261 caccaatagc cagttggccc tggacatcgc caagcgaaca aaaaatatta ttttcgatag
     1321 cgcccatgtg cgcgggccgg gttatgtgaa aaacttcgtc gaagcggtgg gctcggagcg
     1381 catggtgttc ggcagcctgt tttactccca tccggcgagc tacgaccatt gcgtgacctt
     1441 ggaagagatc aaagccgcga agattagcga cgccgacaag gccaacattt tggccggcaa
     1501 cgtcaaaaga attttccagc tcaaatagcc gcgccgagcg gggtttttgc gacaaagttc
     1561 aattcacaga ggagccggtt gcggatcgat tcactatggc taaattctta gtgctgttcg
     1621 gcataaccgt catgggccag tggctgttgc cccattcgct tttgttgtcg gcggagagtt
     1681 ccaataagga attcccgctg ctaaaaatta accgggcgct cgataagcgc acggtgatca
     1741 agccgtcggc gattcccaac ggcggcaacg gcctatacgc tttggtgccg atcaagaagg
     1801 gcgaggtgat cggcgaattg ggtggacgat tgctgccggc ggataaatac cctcaaggca
     1861 accattacat cgccgcgttg ttggagtgcg cgcaaaagca ggcccatcct tacgtttacc
     1921 tagactccaa ggataacggc gccaatgtca gccggatcaa ctttgcgccc agcaaaatca
     1981 acggcattga caccaatttt caaaactcgg cgatccgaag attgtgccag ccgccgtact
     2041 ttgaattcta cgcactgcgg gatatcccgg cgggtgaaga gatattctcc agctatgggc
     2101 ccaattacga ctatgaccgg ttcatgcacc agcccgacgt gaaacagtac ttctgcaagc
     2161 gcgccaagat cgactgccgt acgaattact cgttcgatca ttagcgaatt agatcttccg
     2221 gcacgccgcg gtaaaagatc aggcaccgtg gagccgcagc aaattgtaag ggcatctttc
     2281 tagtgccggc gttccgaccg tcgttcccgc gcacgcggga atccaggtt
//
LOCUS       DATIRS010000292         2552 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_809556, whole genome shotgun sequence.
ACCESSION   DATIRS010000292 DATIRS010000000
VERSION     DATIRS010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2552
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_809556"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..285
                     /locus_tag="VLM90_03645"
     CDS             <1..285
                     /locus_tag="VLM90_03645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12079.1"
                     /translation="SFSQGGRFYSWWAQNYPVPRNVIESHSANMHMIPADDDIERRLK
                     STRSGNLVHIKGYLVEAMGKDGFRWKSSLSRSDTGAGACELIWVESLESW"
     gene            370..1374
                     /locus_tag="VLM90_03650"
     CDS             370..1374
                     /locus_tag="VLM90_03650"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12080.1"
                     /translation="MRRIMQWVLGTILAITLLARLPAVYAAETALKVVDVSLPAVSLL
                     QSPLFAAIESGAFKKYGMEVRYIVTGARSIQALIGGSVNFAQGVSSRTVPSAVLAGFD
                     AVLIANFSDKFLFTMHSAPEINSLHDLRGKIIGVSGLGGSTDFATRVALREAGLVPDK
                     DVMIRGVGGVPETVAALRAKLVHAGTLSPPSSFVAQKAGFKMLFDMTSLGVDYVSSGL
                     GVKKTWLVANRLEAKQFVMAMIEGAKILSTDEEFSLRVLTKHTRISDREVLQQSYRYI
                     KPYFLKVPYPSMRAIKDTLDALAKDLPKAKDADPRDSVDLSIVKEIEASGFIASVYGK
                     "
     gene            1376..2524
                     /locus_tag="VLM90_03655"
     CDS             1376..2524
                     /locus_tag="VLM90_03655"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12081.1"
                     /translation="MMHRFISADDHIDLRWLPQDLWSERLPARLHERGPRVIENDHGA
                     YWSWEGQTFSPHGYYTAAQGSGAMWAIERGGVMRPGELRPTTAELRLSDMDRDGAEAS
                     IMYGPTDPMAIGDPELRRLCYQAYNDWLSEFCAARPERLFGVPQLSMEDPLAARDELA
                     RLARRGGLRHVNILASRASPPVYDDAWEPFWALAEEIDVPIGFHLAVVVKKSRLDESK
                     RAAVNLVVTVAAQFAQEPPGMQLLEPMTGLIFDGVLDRHPRLKIVMAEAGLAWVPSMI
                     QGLDIWYQRTRDGRRLTGEKPIALPKLLPSEYFHRQIWISFVDDPLGVKMVGNVLDAD
                     KVMFGSDYPHPASTWPDSQQVITEQWQGIAPDILQKITRDNARSLFGL"
BASE COUNT          517 a          716 c          802 g          517 t
ORIGIN      
        1 agcttctccc aaggcggacg cttctatagc tggtgggcac agaactatcc ggtaccccgc
       61 aatgtcatcg aaagccatag tgccaacatg cacatgattc cggcagacga tgacatcgag
      121 cgccggctga aatcgacccg ctcgggaaat ctcgtgcata tcaaaggata cctggtggaa
      181 gccatgggta aggacggttt tcgctggaaa agctcgctgt cacgcagcga caccggtgcg
      241 ggcgcctgcg agttgatctg ggtcgagtcg ttggagagtt ggtgagacgc cggcccgttg
      301 gcaaatttct ggacattgca ccgtgcttgg agtaaaccgc gcatagttag tttagcccta
      361 ggagccaaga tgcgacggat aatgcaatgg gtgttgggaa cgatactggc gataacttta
      421 ctggcgcggc tgcctgccgt gtacgccgcg gaaacggcac tgaaggtcgt cgacgtttcg
      481 ctgccggcgg tgtcgttgtt gcagtcgccg ctgtttgccg ccatcgaaag cggcgcgttc
      541 aaaaagtacg gcatggaggt tcgctatatc gttaccggag cgcggagcat ccaagcgttg
      601 atcggcggct cggtcaattt cgcccaggga gtttcgagtc gaaccgtgcc ctccgcggtg
      661 ctggccggat tcgatgcggt gttgatcgcc aacttcagcg acaagttctt attcaccatg
      721 cacagcgcgc cggaaatcaa ttcgttacat gatttaaggg gcaagatcat cggcgtttcc
      781 ggcctcggcg gcagcaccga tttcgccaca cgggtggcgc tgcgcgaagc cgggctggtg
      841 cccgacaaag atgtcatgat tcgcggcgtc ggcggcgtgc cggagaccgt ggcggcgctg
      901 cgcgccaaat tggtccacgc cggcacgctg tcgccgccgt cgtccttcgt cgcgcagaag
      961 gcgggattca agatgttgtt tgacatgacc agtttgggcg tcgactatgt ttcctccggt
     1021 ctgggcgtca agaagacctg gctcgtcgct aaccggctgg aagcgaaaca gtttgtcatg
     1081 gcgatgatcg aaggggcgaa aatcctcagc acggacgaag agttctccct gcgggtgttg
     1141 accaagcaca cgaggatttc cgaccgcgaa gttttgcagc agagttatcg ctatatcaaa
     1201 ccgtatttcc tcaaggtgcc gtatccgtcg atgcgggcga tcaaggatac tttagatgcg
     1261 ctggcaaaag atttgccgaa ggcgaaggac gcagacccgc gcgactctgt cgacttatcg
     1321 atcgtcaaag aaatcgaagc gagcggcttc atcgccagcg tctatggcaa gtaacatgat
     1381 gcaccgattt atctccgccg acgatcacat cgatctgcgt tggctgccgc aggatctatg
     1441 gagcgaaaga ttgccggcgc ggctgcacga gcgcggcccg cgggtgatcg agaatgacca
     1501 cggcgcatac tggagttggg aaggtcaaac cttcagtccc catggctact acaccgcggc
     1561 gcaggggagc ggcgccatgt gggcgattga gcgcggcggt gtcatgcgtc cgggtgagct
     1621 gcggccgacc acggcagagc tgcgcttgag cgacatggac cgcgacggcg ccgaggcttc
     1681 tatcatgtac ggccccaccg atccgatggc gatcggcgat ccggagctgc gccggttatg
     1741 ctaccaagcg tacaacgatt ggttgagcga gttctgcgcg gcgcggccgg agcgactgtt
     1801 cggcgtgccg cagttgtcga tggaagatcc gctggcggcg cgcgacgagc tggcgcgttt
     1861 ggccaggcgc ggcgggctgc gccatgtcaa cattctcgcg tctcgcgcca gtccgccggt
     1921 gtacgatgac gcctgggagc cgttttgggc gctggccgaa gagatcgatg ttcccatcgg
     1981 ctttcatctt gccgttgtcg tgaaaaagag ccggctcgat gaatccaagc gcgctgcggt
     2041 gaatttggtc gtcaccgtgg ctgcgcaatt cgcccaagag ccgcccggca tgcagttgct
     2101 cgaacccatg acgggactaa tttttgacgg cgtgctcgat cgtcacccga gattgaaaat
     2161 cgtcatggcc gaagccgggc tcgcctgggt gccgagcatg atccaaggtc tcgatatctg
     2221 gtatcagcgc acccgcgacg gccgcaggct aaccggcgaa aaaccgatcg cattgcccaa
     2281 gcttttaccg agcgaatatt ttcaccggca gatctggatt agcttcgtcg acgatccgtt
     2341 gggcgttaaa atggtcggca acgtgctcga cgccgacaaa gtgatgttcg gttccgacta
     2401 cccgcaccca gccagcacct ggcccgactc gcagcaggtt atcaccgagc agtggcaggg
     2461 aatcgctccc gatatcctgc aaaaaattac ccgcgacaac gcgcgctcgc tgtttgggct
     2521 ttaacaggca tggcgcagaa aagtttttac ga
//
LOCUS       DATIRS010000293         1966 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_514353, whole genome shotgun sequence.
ACCESSION   DATIRS010000293 DATIRS010000000
VERSION     DATIRS010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1966)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1966)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1966
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_514353"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(126..1076)
                     /locus_tag="VLM90_03660"
     CDS             complement(126..1076)
                     /locus_tag="VLM90_03660"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12082.1"
                     /translation="MRQIRYHSVGLLFALALCASQNASAAERFYISIPGPTLSYAHLY
                     YGQERGFFAQEGLDLQVLVVRGVIGLSSLMSGEIDVTCHAGSGLAAALRGLPIKIVNV
                     THDRPVHDLIVHPSIVTPGDLKGKAIAVGSLEGTAAVIARRVLQAKGLDAEKDVTLLS
                     MDSPARLQSLLSGRVAAGLVTPPTTYLAVDRGFRTMARGRDHIRYLQTGVVATDAAIK
                     QKRANIVRFLRGWNRALKFYQDNPETMIPYIQKKLAVSDAKMARRMYDEDREVISLSG
                     ILSNDATREILDTAREALRIKEPVALERVFDFSLGAEALR"
     gene            complement(1113..>1966)
                     /locus_tag="VLM90_03665"
     CDS             complement(1113..>1966)
                     /locus_tag="VLM90_03665"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12083.1"
                     /translation="PTEPGDELEQLKLAAEEIKSLGHHELFRFAGFAETLVRGSGDGD
                     VLSNPQGVQISPEAKEKFRRILRYFADAGHSFHLHTTQDNTARQLLDVIEQVHATTPL
                     SRQRIVFAHLEDATAETLARIKRLGGGIAVQDRLVLTAERNIELWGEAKTRQAPPLRT
                     MLDSGIPVGAGTDAFRSANYSPMLSLWWLITGKTVAGSAIRDPGQNVSRAEALRLYTI
                     GSAWMTADDGRKGSIEVGKFADLAVLNDDYLTVPEEQIRNLSSLLTMVGGRIVYGAGP
                     YAALAAK"
BASE COUNT          411 a          612 c          556 g          387 t
ORIGIN      
        1 tcgactatcg gcataagcca aggtctctag gaattggcgg cggcaagatg accagcgtgc
       61 cggcagctgc cgtggccaga atgcgatcct gaggttgttc taactccacg gtgataactg
      121 ttcagttaac ggagcgcttc ggcgccaagg gaaaaatcga aaaccctctc caacgcgaca
      181 ggctctttaa tgcgcagcgc ttccctggcg gtgtcgagaa tctcgcgcgt cgcgtcgttg
      241 cttaagatcc cggagagtga aatgacctcg cggtcctcgt catacatgcg ccgcgccatt
      301 ttggcatcgc tgaccgccaa tttcttttga atatagggaa tcatggtctc gggattgtcc
      361 tgataaaatt ttagcgcgcg gttccagccg cgtaggaatc gaacgatgtt ggcgcgtttc
      421 tgtttgatcg ccgcatcggt cgccaccacg ccggtttgta aatagcgaat atgatcccgg
      481 ccgcgcgcca tggtgcgaaa accgcggtcc accgctagat aagttgtcgg cggcgtcacc
      541 aacccggcgg cgacccggcc actcaagagc gattgcaacc gcgccggcga atccatgctg
      601 agcagtgtca cgtctttctc ggcgtcgagt cccttggcct gcaatacccg acgcgcgatc
      661 accgcggcgg tcccctccaa cgagccgacg gcgatagctt tgcccttcaa gtcgcccggc
      721 gtcactatgg acgggtggac gatcaggtca tgcaccggcc ggtcatgggt gacgttgacg
      781 atcttgatcg gcaaaccacg tagcgccgcc gccagaccgc tgccggcgtg gcaggtgaca
      841 tcgatctcgc cggacatcaa gctgctcaag ccaatcacac cgcgcaccac caaaacttgc
      901 aagtccaatc cttcctgagc aaagaaaccg cgctcttggc cataataaag atgagcgtaa
      961 ctgagcgtcg gcccgggaat gctgatgtag aaacgctccg ccgccgatgc gttttggctt
     1021 gcgcaaagtg ccagagcgaa taacagccca acactgtgat agcgaatttg ccgcatacaa
     1081 catcctcgga ttaagttagt tatcgaaacc atttacttcg ccgccaacgc ggcataaggg
     1141 ccggcgccat agacaatccg cccgccaacc atcgtcagca gtgagctcaa attgcgaatc
     1201 tgctcctcgg gcacagttaa gtaatcgtca ttgagcaccg ctaggtcggc gaacttaccg
     1261 acttcgatgg aacccttgcg tccatcgtcc gcggtcatcc aggcgctgcc gatggtgtac
     1321 agccgcaggg cctcggcgcg gctgacattt tgaccgggat cgcgaattgc cgaccccgcc
     1381 accgtcttgc ccgtgatcag ccaccacaac gacagcatcg gcgaataatt cgccgaacga
     1441 aacgcgtcgg tgccggcgcc gaccggaatg ccgctgtcga gcatcgtccg cagcggcggc
     1501 gcttggcgcg tcttcgcttc gccccataac tcaatattgc gctcggcggt gaggaccaag
     1561 cggtcctgca ccgcgatgcc gccaccgaga cgcttgatcc gcgcaagagt ttccgccgtc
     1621 gcgtcttcga gatgggcaaa aacgatgcgc tggcgcgaca acggcgtcgt cgcatggacc
     1681 tgctcgatca cgtccaacaa ctggcgcgcc gtgttgtcct gggtcgtgtg taaatgaaag
     1741 ctatgaccag cgtcggcgaa gtagcgcaag atgcggcgaa atttctcttt cgcttctgga
     1801 gaaatctgca cgccttgcgg attcgacaag acatcgccgt cgccgctgcc gcgcaccagc
     1861 gtctcggcga atccggcgaa gcgaaacagc tcatgatggc cgaggctttt aatctcctcg
     1921 gcggccaact tcaattgctc caactcgtcg ccgggctcgg tgggcg
//
LOCUS       DATIRS010000294         2784 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1498431, whole genome shotgun sequence.
ACCESSION   DATIRS010000294 DATIRS010000000
VERSION     DATIRS010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2784
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1498431"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(9..>2784)
                     /locus_tag="VLM90_03670"
     CDS             complement(9..>2784)
                     /locus_tag="VLM90_03670"
                     /inference="COORDINATES: protein motif:HMM:NF024180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CHAT domain-containing protein"
                     /protein_id="HSQ12084.1"
                     /translation="LKELDAGIQAVGAKDPNAYEFYNRRAPLDLDRGDYVSARAAREL
                     ALEVAGSAGRQFFQLNYLSSISAVLRDRDSAKTYLSRADSLLSSVRRGNPDWGRFGNF
                     WQAALSESKGNYNLSFGHLIEAQSHYRTCTTAIRSYMGKTPNPADNSYYYLPQCLGRS
                     VELAARLGYLREAGAYVNDVRETAKAYAQAHQRLLFETRTARPIARVYLEQGLLTEAK
                     ELIDSTISRSEKFQQGEASLQVGAVRLFAAQLEMIQGNWLKAEEHFRARRDGLRANKA
                     QAEELDTENVPDWGYALLRLGKTQEAMNVLNADLTTSQKRFDDDSLFLWDSRAFHALG
                     IGAAGDKEAAVKTLAVTIPKLLELGRGQGSTESGFLTSARTGWILEGYIALLADLHRA
                     KVRTAGIEPYVEAFRIADLARASRVEKALSAAIVRASINDPQLAAVLRRAQDLDYQVK
                     AISEALTALQQGVKTDKPDPNREKVIEKTRAELARVREENDQAQAELKRKLPDYSELL
                     NAKPLTIGDTQKLLKPQEALISLYSTQQQTLVWAMAGQGQPAFQVVDLPSAKVAELVT
                     KLRKALDPTEADISQVPTFDFATALELYQKLLAPVEAGWKNAKELIIVPHGAISELPF
                     SVLVTSPYQPNKAGIPFSDHGGAPWLLRSAAISYLPSLSALASLRRGATLSAANSFIG
                     FGDPVFGGGAKAAAPVAARGMVRRNAKATAAPSSPTSNLALLQALPDTADEVRDIAKI
                     LRADDSRDIHLGRRASEHLVKNVDLSAYRVVMFATHGLVPGELPELNQPALALSNPAI
                     TGEIEDGLLTLAEILGLKLRADWVVLSACNTASADGQASEAVSGLGRAFFFAGAKALL
                     VSHWPVETVSAKLLTTELFKRQASDAKISRAQAVREASLAVMQQSSGKSYSYAHPMFW
                     APFVVVGDGG"
BASE COUNT          539 a          811 c          841 g          593 t
ORIGIN      
        1 gagaatggct acccgccatc accgacgacg acgaagggcg cccagaacat cggatgagcg
       61 tagctatacg acttgcccga agattgttgc ataaccgcga gcgaagcttc gcgcaccgcc
      121 tgggcgcggc tgatttttgc atcgctagcc tgtcgtttga acaattccgt cgtaagcagt
      181 ttcgccgaca ccgtttccac cggccagtgc gaaaccagca aagctttggc gccggcgaag
      241 aaaaaggcgc ggcccaggcc tgaaaccgct tcggatgcct ggccgtcggc ggatgcggtg
      301 ttgcaggccg ataggacgac ccaatcggcg cgcaacttga ggccgagaat ctccgctagg
      361 gtgagcaggc cgtcttctat ctctcctgta atagccggat tgctgagcgc caacgccggt
      421 tggttcaatt ccggcaactc gcccggcacc aagccgtgag tcgcgaacat gacgacccgg
      481 taggcgctga ggtcgacatt ctttaccaaa tgctcgctgg cgcgtcggcc caggtgaata
      541 tcgcggctat cgtcagcgcg gaggattttc gcgatgtcgc gcacttcatc ggcggtgtca
      601 ggcagggctt ggagcaatgc caaattgctc gtcggcgaac tcggcgccgc agtggccttg
      661 gcattacgcc gcaccatgcc gcgcgcagcg acgggcgcgg ctgctttcgc gccgccacca
      721 aaaaccggat cgccgaagcc gataaaacta tttgccgctg acagtgtcgc gccgcggcgc
      781 aggcttgcca gcgcggacaa cgatggcaga taagaaatcg cggcgctcct gagcagccac
      841 ggcgcgccgc cgtggtcgct aaacggaatg ccggctttgt tcggctgata ggggctcgtg
      901 accagcaccg aaaaaggcag ttcactgatc gcgccatggg gcacgatgat cagttctttg
      961 gcgtttttcc atcccgcttc cacaggcgcc aagagttttt gatagagctc gagcgccgtg
     1021 gcgaaatcga aggtgggcac ttggctgatg tcggcttcgg tcgggtcgag agctttgcgc
     1081 agtttggtga cgagctcggc aaccttcgcg cttggcagat cgacaacttg aaatgccggc
     1141 tgtccttggc ccgccattgc ccagaccagc gtttgctgtt gcgttgagta gagcgaaatc
     1201 agcgcttctt ggggtttcag caacttctgc gtatcaccaa tggtcagagg tttggcattc
     1261 aacagttccg aatagtcggg cagcttgcgc ttgagctcgg cctgggcctg gtcattttcc
     1321 tcgcgcactc gtgccagctc cgcgcgggtt ttctcgatga ctttttcacg attgggatca
     1381 ggtttatcag tttttacgcc ttgctgcagg gcggtgagcg cctccgagat cgctttcacc
     1441 tggtagtcaa gatcttgggc gcgccgcaat accgcggcca actgtgggtc gttgatgctg
     1501 gcacgcacga tggcggcgga gagcgccttt tcgacgcggc tggcgcgggc caaatcggcg
     1561 atgcgaaacg cttcgacata aggttcgatt ccagcggtac gaactttggc gcggtgcaga
     1621 tcggccaaga gcgcgatgta gccctccaag atccaaccgg tccgagccga agtgagaaaa
     1681 ccgctctccg tggacccctg gccgcgtcct aactcaagga gtttaggaat ggtgacagcc
     1741 aatgtcttaa ccgcggcttc cttatcgccg gcagcgccaa taccgagtgc atgaaacgca
     1801 cggctatccc acaaaaatag cgaatcgtcg tcgaatcgtt tttggcttgt cgtgagatcc
     1861 gcgttaagaa cgttcatcgc ctcttgggtc ttgccgaggc gcagcagcgc gtagccccag
     1921 tcaggcacat tttccgtgtc gagctcttct gcctgcgcct tgttggcgcg taaaccgtcg
     1981 cgccgggcac gaaagtgctc ttcggctttg agccaattcc cttgaatcat ttccaactgc
     2041 gcggcgaaga gacggacagc gccgacttgc aaggacgctt cgccctgttg aaatttttcg
     2101 ctgcggctga tcgtcgagtc gattagctcc ttagcttcag tcaacagtcc ctgttcgaga
     2161 tatacccgcg cgatgggccg cgccgtgcgc gtctcaaaca gcagccgctg atgtgcttgg
     2221 gcataggctt tcgccgtttc gcggacatcg ttaacatagg cacccgcctc gcgcaggtat
     2281 ccgagccgcg ccgccagctc cacggagcgg cccagacact ggggcaaata gtagtagcta
     2341 ttgtccgccg gattcggggt tttgcccatg taactgcgga tcgccgtggt gcatgtgcgg
     2401 taatggctct gagcttcgat aaggtgaccg aaagaaaggt tatagttgcc cttggattcg
     2461 ctgagcgccg cttgccaaaa attgccgaaa cgtccccagt ctggattgcc gcggcgcacc
     2521 gaggaaagca ggctgtcggc gcgcgacaaa taggttttag cgctgtcgcg gtcgcgcagt
     2581 acggcgctga tcgagctaag ataattgagt tgaaagaatt gacgtccggc gcttccagcg
     2641 acctctaacg ccaactcgcg cgcggcgcgg gcactgacat agtcgccccg gtctagatcg
     2701 agcggcgcgc ggcgattgta gaattcatag gcgttcggat cttttgcccc gacggcttga
     2761 attccggcat cgagttcttt caat
//
LOCUS       DATIRS010000295         3568 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_417060, whole genome shotgun sequence.
ACCESSION   DATIRS010000295 DATIRS010000000
VERSION     DATIRS010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3568
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_417060"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..647)
                     /locus_tag="VLM90_03675"
     CDS             complement(<1..647)
                     /locus_tag="VLM90_03675"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HSQ12085.1"
                     /translation="MRISEIFYSIQGEGRLFGVPSVFVRTRGCNLRCRWCDTPYTSWR
                     PEGKTWSVEKILGEIAKYPTRHVVITGGEPLLAPDIAELTHELKQRAAHITIETAATI
                     FKPVAGDLMSLSPKLANSTPWKRSKGKFAAMHEKHRLNYPVVQQYIDGYDYQLKFVVD
                     RKPDIDEVRAVVAQLQYVDASRVMLMAQGVNQAELNRKAEWIVESCKQYGFSYTPR"
     gene            859..3408
                     /gene="uvrA"
                     /locus_tag="VLM90_03680"
     CDS             859..3408
                     /gene="uvrA"
                     /locus_tag="VLM90_03680"
                     /inference="COORDINATES: protein motif:HMM:TIGR00630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HSQ12086.1"
                     /translation="MNGKAIRIVGAKQNNLKNLDIEIPLNQLTVVTGVSGSGKSNLAF
                     DILYAEGQRRYVESFSAYARQFLDRMDKPDVESIEGIPPTIAIDQSRPVRTSRSTVGT
                     MTELHDHFKLLFAKIAVLYCRGCQRIVERDSAATVLQKLGDLAEGTPVVLTFPLPASS
                     VSWEEVRNGLRQAGFHRLLIDHTICELDDIDKAPARKQPFEVVIDRFAFRPENKKRIA
                     DSLEQAFHYGKGRLNLFLPQDDWRREPFSNHLHCPHCDISYRDPVPNIFSFNSPLGAC
                     ETCKGFGRVIDIDIDLVIPNPGKSLADGAIKPWINRKRRTKRLLDFCNTKKIPVKTPW
                     GELSDAQRQLVIDGDGEYKGIRGWFRRLERRSYRMHVRVLLARYRAYLLCSECNGSRL
                     KADALNYRIDGKDIAQVNAMNVGVAHDWFTALKPAGALDQVSSLILDEIRRRTGYLVG
                     VGLEYLTLDRQSRTLSGGELERVDLTTAIGSSLVNTLYVLDEPSIGLHPRDSRRLVEI
                     LQRLRANQNTVVIVEHDPEIIKECDYILDLGPKAGEQGGQIMFAGTYDELLKDENSLT
                     AAYLSQRKSIAMPARPRKPLLQRSLKITGASANNLKNIDVEIPLGMLVCITGVSGSGK
                     SSLVDEVLSRNLKKLKEAPTANVTHCEKIDGIEKISEVVLVDQSPVGTTPRSNPATYM
                     KAFDGIRKLFAGAELARLRGYTPSTFSFNVEGGRCETCHGEGYEKVEMQFLSDVYTSC
                     PECHGSRFREEVLEVAYRGKSIRQVLDLTVSDALEFFKESNDVKGSLEPLRAVGLEYL
                     RLGQPVTTLSGGESQRLKLAAHMARAKKAGTLFIFDEPTTGLHFHDIDRLL"
BASE COUNT          759 a         1095 c          984 g          730 t
ORIGIN      
        1 cgcggcgtgt agctgaagcc atactgcttg cacgattcga cgatccattc ggccttgcgg
       61 ttcaactccg cttggttgac gccctgggcc atgagcatca cccggctggc atcgacatat
      121 tgtaactgcg cgacgacggc gcggacttcg tcgatgtccg gtttccgatc aacgacaaat
      181 ttgagctggt agtcgtagcc atcgatatac tgctgcacga ccgggtaatt gagccggtgc
      241 ttttcatgca tggcggcgaa cttacccttg cttcttttcc atggcgtcga gttggccagc
      301 ttcgggctca acgacatcaa atcgccggcc accggtttga agatcgtcgc cgcggtttcg
      361 atggtgatat gggcggcgcg ctgctttagt tcatgtgtca gctcggcaat gtcgggcgcc
      421 aacagcggtt cgccgccggt aatcaccaca tgtcgggttg gatacttggc gatttcaccg
      481 agaatctttt cgacgctcca agtttttccc tccggccgcc acgaagtata aggcgtgtcg
      541 caccaacgac aacgcagatt gcagcctctg gtccgaacaa acaccgaggg cacgccaaac
      601 aaacgacctt cgccctggat cgagtaaaat atctcgctga tgcgcatggg cgtgaaacta
      661 acagacgccg cgtgccggtg aaagtacggc aaatcaaact tgattcgact cttctctgtg
      721 atagacgtac taggttggtg cacgataaat ttaactttcc ccattatcac cacggaagtg
      781 aatgtcgatg gcaggcaagc aagcgttgcg gaccgaacta tagcgacggc tcatgcttga
      841 cctagcgata aaatgtctat gaatggcaaa gcgattcgca tagtcggcgc caagcagaat
      901 aacttgaaga atctcgacat cgagattccg ctcaaccaac tcaccgtggt taccggtgtc
      961 agcggttcag gtaagtcgaa cctcgctttc gatatcctct acgccgaggg ccagcgccgc
     1021 tacgtcgaaa gcttttccgc ctacgcccgg cagtttctcg accgcatgga caagcctgat
     1081 gtcgagagca tcgaaggcat cccgccaacc atcgccatcg atcagagccg gccggtgcgc
     1141 acctcgcgct ccaccgtcgg caccatgacc gagctgcacg atcattttaa actgttattt
     1201 gccaagatcg cggtgcttta ctgccgcggc tgtcagcgta tcgtcgagcg cgatagcgcc
     1261 gccactgtcc tgcaaaaact cggcgacctg gcagaaggca cgccggtggt cttgaccttt
     1321 cccctgccgg cgtcgtcggt gagctgggag gaagtccgca acggtctgcg ccaggcgggc
     1381 ttccatcgct tgctcatcga ccacaccatt tgcgaactcg atgacatcga taaagcgccg
     1441 gcgagaaagc agcccttcga ggtcgtcatc gaccgctttg cctttcgtcc ggaaaataaa
     1501 aagcgcatcg ccgactcttt ggagcaggcg tttcactatg gcaaaggccg gttgaatcta
     1561 ttcttaccgc aggatgactg gcgccgggag cctttcagca atcatctgca ttgcccgcac
     1621 tgcgatattt cctaccgcga tccggtgccg aatatttttt cattcaatag tccgttgggc
     1681 gcctgtgaaa cttgcaaagg cttcggccgg gtcatcgata tcgatatcga cctggtgatt
     1741 cccaatccgg ggaaatccct cgccgacggc gccatcaaac cctggatcaa ccgcaagcgc
     1801 agaaccaagc ggctgctcga cttttgcaac accaagaaaa tcccggtgaa aactccttgg
     1861 ggcgaactga gcgacgcgca gcgccagttg gtcatcgacg gcgacggcga atacaaaggc
     1921 atccgcggct ggtttcgccg cctggagcgg cgcagctacc gcatgcatgt gcgcgtcttg
     1981 ctggcgcgct accgcgccta tttgctctgt tccgagtgta acggcagccg gctcaaagcc
     2041 gacgcgctca actatcgcat cgacggcaaa gacatcgctc aagtcaacgc catgaatgtc
     2101 ggcgttgccc atgattggtt taccgcgttg aaaccggccg gcgccctcga tcaagtgtcg
     2161 agtctgatcc tcgacgagat tcgccgccgc accgggtatt tggtcggcgt cggcctggag
     2221 tatctcaccc ttgaccgcca atcgcgcacg ctttccggcg gcgagttgga gcgcgtcgat
     2281 ctcaccactg ccatcggctc gtccttggtc aacaccctct acgttctcga cgaaccgtcc
     2341 atcggtctcc atccgcgcga cagccgcaga ctggtggaaa tcctccagcg cttgcgggcg
     2401 aatcagaata ccgtcgtcat cgtcgaacat gatcccgaga tcatcaagga gtgcgattat
     2461 atcctggatc tcggtcccaa ggccggcgag caaggcggcc aaatcatgtt cgccggcacc
     2521 tatgacgaat tattgaagga cgaaaattcg ctcaccgcgg cttatctaag ccagcgcaaa
     2581 tcgattgcca tgccggcgcg gccgcgcaag ccgctgttgc aacgctcgct gaagatcacc
     2641 ggcgcctcag cgaataattt aaagaacatc gacgtggaga ttcccctcgg catgctggtg
     2701 tgcatcaccg gcgtctccgg ctcgggaaaa tcaagcctgg tcgacgaagt gctgtcgcgc
     2761 aatttgaaaa aactcaagga agcgcccacg gccaacgtca cccattgcga gaagatcgac
     2821 ggcatcgaga aaatctccga agtcgttctg gtcgaccagt cgccggtcgg caccacgccg
     2881 cgctccaacc cggcgactta catgaaagcc ttcgacggca tccgcaagct gttcgccggc
     2941 gccgaactgg cgcgcctgcg cggctacacg ccgtcgactt tttctttcaa cgtcgagggc
     3001 ggccgctgcg agacctgcca tggcgaaggc tacgaaaaag tcgagatgca gtttctctcc
     3061 gacgtttaca cttcctgccc ggagtgtcac ggcagccgct tccgcgaaga agtcctcgaa
     3121 gtcgcctatc gcggcaagag cattcgccag gtgctcgatc tcaccgtcag cgacgccttg
     3181 gagtttttca aagagagcaa cgatgtcaag ggatctctcg aaccgctgcg cgccgtcggt
     3241 ttagaatacc tgcgcttggg ccagccggtg acgacgctgt ccggcggcga gtcccagcgc
     3301 ttgaagctcg ccgcccatat ggcgcgggcg aagaaagccg gcacgctgtt tatctttgac
     3361 gagcccacca ccgggctgca cttccacgac atcgaccggc tgctctgagc gttcaacgaa
     3421 ctgatcgagc agggtcactc ggtggtcgtc atcgagcata acttggaagt catcaagtgc
     3481 gccgaccaca tcatcgacct tggccccgag ggcggcgaca aaggcggcga gatcgtcgcg
     3541 cccggaactc cggcacagat cgccgcgg
//
LOCUS       DATIRS010000296         1522 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_613750, whole genome shotgun sequence.
ACCESSION   DATIRS010000296 DATIRS010000000
VERSION     DATIRS010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_613750"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1522
                     /gene="treY"
                     /locus_tag="VLM90_03685"
     CDS             <1..>1522
                     /gene="treY"
                     /locus_tag="VLM90_03685"
                     /EC_number="5.4.99.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR02401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047470 - (1,4)-alpha-D-glucan
                     1-alpha-D-glucosylmutase activity [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="malto-oligosyltrehalose synthase"
                     /protein_id="HSQ12087.1"
                     /translation="AREGKFTGLRIDHVDGLYDPLGYLQRLRREAGGVYLTVEKILGF
                     DEELPAQWPIEGTTGYEFLNFVSGIFCARRQRRRFNLIYHRFAELEGSCSAVMIEKKR
                     LIIGKYMAGDIESLANLLKGVSSRDRHAADITLYGLKRALVEVLTFFPVYRSYVSADS
                     FTAQDRRELGTAIARAKETNAGLLLELNFIERFLLLDFAAHLGAEEKACWIHFVMRFQ
                     QLTGPLMAKGFEDTTLYVYNRLLSLNDVGGDPDRFGVTVDEFHDFIQRRKDRWPRAMN
                     TTATHDTKRGEDARARINVLSELPDEWDECLKTWSKINRAKKIKIKGEEAPDRNDEYF
                     LYQTLIGSYPVGDSGHGDFLERLRAYLVKAVREAKVHTEWLKPDLAYEEAFTSFAGAL
                     LAPGENNRFLSELAPFARKIAQCGMYNSLGQTLLKLAVPGVPDCYQGTELWDLSFVDP
                     DNRRPVDFAARHRLLRELKTSEAKDRAALLQDLLSEWPDGRIKLYLLHKLLSFRRE"
BASE COUNT          325 a          438 c          451 g          308 t
ORIGIN      
        1 tggcgcgcga aggcaagttc accggcctga gaatcgatca cgtcgacggg ctctacgatc
       61 cgctcggtta tcttcagaga ctgcggcgtg aagcgggcgg ggtgtatttg accgtcgaga
      121 agattttggg cttcgacgaa gagctgccgg cgcaatggcc gatcgaagga accaccggct
      181 acgagtttct caacttcgtc agcggcattt tttgtgcgcg ccgtcagcgg cggcgcttta
      241 acctgattta ccaccggttc gccgaactcg aaggctcgtg ctcggcggtg atgatcgaaa
      301 aaaaacggct gattatcggc aaatacatgg ccggcgacat cgaaagtctt gccaatctgc
      361 ttaaaggcgt gtccagccgt gaccgccacg cagccgacat tacgctttac ggcctcaagc
      421 gcgcgctggt ggaagtgttg acgttctttc cagtctaccg tagctacgta agtgcggaca
      481 gtttcaccgc ccaggaccgc cgcgagctcg gcacggcgat cgcacgggcc aaggaaacca
      541 atgcggggtt gctgctcgaa ctaaatttta tcgagcgctt tctcctgctc gatttcgccg
      601 cccacttggg cgcggaagaa aaggcgtgtt ggatccactt tgtgatgcgc ttccaacagc
      661 tcaccggccc tttgatggct aaaggtttcg aagatacgac gctgtacgtc tacaaccggc
      721 tgctgtcgct caacgacgtc ggtggcgatc cggatcgctt cggcgtcacg gtcgatgagt
      781 ttcacgattt catccaacga cgcaaggatc gttggccgcg ggcgatgaac accacggcaa
      841 cccacgacac caagcgcggc gaggatgcgc gcgcgcgcat caacgtgctg tccgagctgc
      901 cggacgagtg ggacgaatgc cttaagacct ggagcaaaat caaccgcgcc aaaaagatca
      961 agatcaaagg agaggaagcg ccggaccgta acgatgagta ctttctgtat caaacgctga
     1021 tcggctccta tccggtcggg gacagcgggc acggggattt tttagagcgc ttgcgcgcgt
     1081 atctggtcaa agccgtgcgc gaggctaaag tgcacaccga atggctcaag cccgacctgg
     1141 cttacgaaga agcgtttacc agttttgccg gcgcgctgct cgcgcccggg gaaaacaacc
     1201 ggtttctttc cgagctggca cccttcgcgc gaaagatcgc tcaatgcggc atgtacaatt
     1261 ccctcggcca gaccctgctc aagctcgcgg tcccgggcgt gccggattgc tatcaaggaa
     1321 ccgagttatg ggatttgagt tttgtcgatc cggacaatcg ccggccggtg gatttcgccg
     1381 cccgtcatcg cctgcttcgc gagctcaaga caagcgaggc aaaagatcgc gcggcgctgc
     1441 tgcaagatct gctctctgaa tggcccgacg gcaggatcaa gctctatctg ctgcacaagc
     1501 tgttgagctt tcgccgagaa ca
//
LOCUS       DATIRS010000297         1766 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1400727, whole genome shotgun sequence.
ACCESSION   DATIRS010000297 DATIRS010000000
VERSION     DATIRS010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1766
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1400727"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..546
                     /locus_tag="VLM90_03690"
     CDS             <1..546
                     /locus_tag="VLM90_03690"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HSQ12088.1"
                     /translation="VTVLFVDIRGFTALAERAGPAAIATRLNGFYEVASRAIFRYDGT
                     VDKLVGDQVMAFFGPPLDHEDHPRRAVMTALEIMRAVAELTQEESLAVGMGITTGEAF
                     VGNVGGADVTDYTVLGDTVNVAARLEAEAAPGEILIAQETYDAVAADFPHAARRELLL
                     KGKSEPVVAWQIAALTATRSA"
     gene            complement(639..1148)
                     /locus_tag="VLM90_03695"
     CDS             complement(639..1148)
                     /locus_tag="VLM90_03695"
                     /inference="COORDINATES: protein motif:HMM:NF013629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HSQ12089.1"
                     /translation="MKVKNIHAQKQKKLELLELVCHERSLPVTVQRRVVLDALLDRHD
                     HPTVDQLYEDVKERMPGVSRTTIYRALETLVELGLARRTNHFEASARFDGNTDHHHHL
                     VCRSCNHVTDIDHPSLNNFSPPSLGNIAFEVLDYSIHLEGLCAECQKSGAKAASKNGT
                     AKRPRTLSR"
     gene            complement(1209..1619)
                     /locus_tag="VLM90_03700"
     CDS             complement(1209..1619)
                     /locus_tag="VLM90_03700"
                     /inference="COORDINATES: protein motif:HMM:NF018351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase-related domain-containing protein"
                     /protein_id="HSQ12090.1"
                     /translation="MAEKKKETLATAAGIPVADNQNALTGGERGPVLVQDWQLFEKHA
                     HFNRERIPERISGDADRYDHRKGNDDYTQAGNLFRLMSADQKRQLIQNIVGAMKTVPR
                     EIQERQIAHFSKADPAYGEGVAKGLGLPTRQMSS"
BASE COUNT          311 a          521 c          527 g          407 t
ORIGIN      
        1 gtcaccgtct tgttcgtcga tatccggggt ttcacggcgc tcgccgagag ggcgggtccc
       61 gccgccatcg ccacgcgact caacggcttc tacgaagtcg cttcacgagc gatctttcgc
      121 tacgacggca ctgtggacaa actcgtcggc gatcaagtta tggcgttctt cggcccgccg
      181 ctggatcacg aggaccatcc gcgccgcgcc gtgatgactg ctttggaaat catgcgagcc
      241 gttgccgaat tgacccagga agaaagtttg gcggtgggta tgggtatcac cacgggagaa
      301 gccttcgtcg gcaacgtcgg cggcgccgac gtgacggatt acaccgttct cggcgatacc
      361 gtcaacgtgg ccgcgcggtt ggaagccgag gccgcgcccg gtgaaatcct gatcgcgcag
      421 gaaacctacg atgccgtcgc ggccgacttt ccccatgccg cacgccgcga gttgctgctc
      481 aagggcaaaa gcgagccggt ggttgcttgg caaatcgccg ctttgaccgc gactcggtct
      541 gcttgatcgg tcgtcctgag gcggatgcgc gctgacttag ccgctgttcg gtttttggct
      601 ttctgcagcg cgtgtgagat ggcacgcgcc aagtgtgatt atcgagaaag agttcgcggg
      661 cgtttggcag ttccgttctt cgacgccgct ttcgcgccgc tcttttgaca ctcggcgcag
      721 agaccttcga gatggatgga ataatccaag acttcaaagg cgatattgcc cagactcggc
      781 ggcgagaaat tgttcagact cggatgatcg atatcggtga catggttgca acttcggcac
      841 accaggtgat ggtgatggtc ggtgttgccg tcgaaccgcg ccgaggcttc gaagtgattg
      901 gtgcgccgcg ccaaacctaa ctcgaccagc gtctccagcg cgcgataaat cgtcgtgcgc
      961 gacacgcccg gcatgcgttc tttgacatcc tcatagagtt gatcgacggt cggatgatcg
     1021 tggcggtcga ggagcgcgtc gagcacgacg cggcgctgca ccgtcacagg cagactgcgc
     1081 tcatggcaga ccaactccaa gagttccaac tttttctgct tttgagcgtg aatattttta
     1141 actttcacgg ttctcccccg agcgcgggac ggcggtttct ctccgcccca ccgcgctcca
     1201 tcggcatact acgatgacat ttgtcgcgtc ggcaaaccca gacccttagc cacgccctcg
     1261 ccgtaggcgg gatcggcctt agagaagtgg gcgatctggc gctcctggat ctctctcggc
     1321 accgtcttca tggcgccgac gatgttctga atcaattgtc gcttctgatc cgcactcatc
     1381 agacggaaga gattccccgc ctgggtataa tcgtcgttgc ctttacggtg atcgtagcgg
     1441 tcggcgtcgc cgctgatccg ctcgggaatt ctctcgcggt taaagtgagc gtgcttttcg
     1501 aacagctgcc agtcttgtac tagcaccggc ccgcgctctc cgccggtcaa tgcgttttgg
     1561 ttgtcggcca ccggtatgcc ggcagcggtg gctagcgtct ctttcttctt ttctgccatg
     1621 aatttctgct cctggttcaa tttcagttgt gtcattgagc gggcgcgcgc tcgtcgaaag
     1681 ctcggcgccg ggactcttta gtttccattg agatagccct ttacgcaggt agccgggttc
     1741 caggccaagc agatcgcaaa cgttga
//
LOCUS       DATIRS010000298         2225 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_220546, whole genome shotgun sequence.
ACCESSION   DATIRS010000298 DATIRS010000000
VERSION     DATIRS010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2225
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_220546"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            397..840
                     /locus_tag="VLM90_03705"
     CDS             397..840
                     /locus_tag="VLM90_03705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12091.1"
                     /translation="MLYDDDSAVLLDVASGKRLKIAWPALSSYEEKVHPETQEAYIVM
                     LFDDGTQLALVDPGGVAFAPSTVNSGAVENLPAVVCLRDLLMLKQRVDHLLYDHPDEP
                     PPRECLNLIMICIAILDGARAVGFDVGDLEGELEKSLAEVERRTA"
     gene            922..2169
                     /locus_tag="VLM90_03710"
     CDS             922..2169
                     /locus_tag="VLM90_03710"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: protein motif:HMM:NF006050.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HSQ12092.1"
                     /translation="MGKLIELCCPKCHSVAASKTEFRCPACHSVRETVLAIDHLSRDD
                     FARLRQSRDLSIWRWFDFFPVENHSSIVSLGEGSTPLIPANRLGEKLGIASLYLKNDT
                     VLPTGSLKDRSNSVGLSVGKELGFATASVISTGNAAASVAAYAAAAGMNSVVMVPKGT
                     ATSKIIQAHAYGATVIVVDGRFDYEVAELYKNAVREFGWYDCVSSNPYRVGKKSYAYE
                     LVDQLDGMPADWVIHPTAGGTGLVCMWQGFKEFLTLGWIDRAPKLVAAQSEAAAPFVA
                     AMAKGSMTIEAVEARATVAESIQVGNPSSLGDRALAALRQSQGTAVALSDGEILEAQS
                     QIARLAGIFAEPAAATSVAAAKKLRASGAIQPDAVVVCNLTGHGLKQPEAIRFAAQEF
                     APIAPTLAALREQLRRSTDARPT"
BASE COUNT          428 a          609 c          718 g          470 t
ORIGIN      
        1 cagccgcttc actcaatcgc tgcggattaa ttccccgtag cttgccgcgc tgtgattccg
       61 acgtaggatg ggtggagcgt gagcgatacc catcattccg aacggtgggt atcggcgcgt
      121 cgcgcctcca cccaccctac aactgcaact acaacgcccg acgtgggttt actttgatat
      181 ccggctgctt gcggtggggt tcctcattcc attgatcggt aagctcgata gcaagccccg
      241 cgcgcggcgg ttacagccgg caatcgagct gatttagttt atttatttgc cgcgctggga
      301 taaacattat tagcattcgc cgcgttgcgg cccgggaaga caatggagca ggcaagatcg
      361 atagcgaggc tatgggctga gcgccatcgg caggcagtgc tgtatgacga tgacagcgcg
      421 gttctactgg atgtcgcttc gggcaagcgg cttaagatcg cgtggccggc gctgtccagc
      481 tacgaagaga aggttcatcc tgagactcag gaggcttata ttgtcatgct cttcgacgat
      541 ggcacgcagc tcgccttggt cgaccccggc ggggttgcct ttgcgccgtc gacggtgaac
      601 tccggcgcgg tggagaatct gccggcggtg gtgtgtttgc gcgatctgct catgctcaaa
      661 caacgggtcg accatttgct ctacgatcat cccgacgaac cgccgccgcg ggaatgttta
      721 aatctcatca tgatctgcat cgcgatcttg gacggcgccc gggcggtggg attcgatgtc
      781 ggcgatctcg aaggcgagtt ggagaagtcg ctcgctgagg tcgagcgacg aacggcgtag
      841 atgaggcgga atggagtgat ggagtactgg agttatgggt tcggatcggc atcggccgag
      901 gatcgataga tcgtgagtgg catgggaaaa ctaatcgaat tgtgttgtcc gaaatgtcac
      961 agcgtcgcgg catcgaagac ggagtttcgt tgcccggcgt gtcactcggt gcgcgaaacg
     1021 gtgcttgcta tcgatcacct cagtcgagat gatttcgcgc gcttgcggca gagccgcgac
     1081 ctgtcgatct ggcgctggtt cgactttttt ccggtggaaa atcattcctc gattgtttcc
     1141 ttgggcgaag gcagcacacc gctgattcct gccaatcggc tcggcgaaaa gctcggcatc
     1201 gccagtttat atttgaaaaa cgacaccgtg ttgccgaccg gctcgctcaa ggatcgcagc
     1261 aacagcgttg gtctgtcggt gggtaaggaa ctgggattcg ccaccgccag tgtgatctcg
     1321 acgggcaacg ccgccgcctc ggtggcggcc tatgcggcgg ctgcgggcat gaatagcgtc
     1381 gtcatggtgc ccaagggcac ggcgacttcc aagattattc aagcccatgc ttacggtgcg
     1441 acggtgatcg ttgtcgacgg ccgcttcgat tacgaagtgg ctgagctata caaaaacgcg
     1501 gtgagggaat tcggttggta cgattgcgtt tcctccaatc cctatcgggt cggcaagaag
     1561 agttacgctt acgaactggt cgaccaattg gatggcatgc ctgcggactg ggtgattcat
     1621 ccgaccgccg gcggcacggg gctggtttgc atgtggcagg gtttcaaaga attcctgact
     1681 ttaggttgga tcgatcgtgc gcccaaactg gtcgcggcgc aaagcgaggc ggcggcgccg
     1741 ttcgtcgcgg cgatggctaa agggagtatg acgattgagg ccgtggaggc ccgtgcgacg
     1801 gttgccgaga gtattcaagt cggcaatccc agctccctcg gcgatcgcgc cctggcggcg
     1861 ttgcgccaat cgcagggcac ggcggtggcg ttgagcgacg gcgagatcct cgaagcgcag
     1921 tcgcagatcg cccggctggc cggcatcttc gccgagccgg cggcggcgac ttcggtggcc
     1981 gcggcgaaga aattgcgcgc ttcaggagcg atccagccag acgctgtcgt ggtgtgcaat
     2041 ctcaccggcc acggattgaa acagccggaa gcgattcgct ttgccgcgca ggagttcgcg
     2101 ccgatcgcgc cgacgctggc cgcgttgcgc gagcagttgc gtaggtccac cgacgcccgg
     2161 ccaacttgac agcaacctac gacctgcaat aactttcgct caaaccattg aacacgaggt
     2221 aaatc
//
LOCUS       DATIRS010000299         2000 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_515009, whole genome shotgun sequence.
ACCESSION   DATIRS010000299 DATIRS010000000
VERSION     DATIRS010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2000
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_515009"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..975)
                     /locus_tag="VLM90_03715"
     CDS             complement(<1..975)
                     /locus_tag="VLM90_03715"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ12093.1"
                     /translation="MEVYQAMGVTKFGSHYLPTYVPDLDGSVSEFYQKMFGQMEEMDR
                     LGYDHIWVTEHHFAHYGGDLPHPPTFMSAIARTTKQIRLGVAIGVLPLHNPIDLAESY
                     AMVDVISNGRLDFGVGKGSEAHEYKKYRVDQKEATGRMYEGVEVMLQAWSDKPVNFKG
                     EFFNYENVPVYPKPVQRPHPRFWVGCARTEDSFRWAGENGFRLMTLPYLYRDPGALPA
                     FIKIYRDNLAKAGHDAGKMDILGKFHIYVSSSLEKAIEEAAPYLDNYLVVHQAADTDR
                     KEVGLLIQRDAKTQITEGFVLAGDPQRVADTIRKWAAPNGLTTISGTFH"
     gene            1260..>2000
                     /locus_tag="VLM90_03720"
     CDS             1260..>2000
                     /locus_tag="VLM90_03720"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: protein motif:HMM:NF015047.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016703 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of one atom of oxygen (internal
                     monooxygenases or internal mixed function oxidases)
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HSQ12094.1"
                     /translation="MIHTRICDLLGIDHPIVLGGMGSATTATLVAEVSNAGGFGTLGT
                     SAFNAATLENEIAAIHERTDKPFGINHLLFQTQEDMFAVTLRARPAVAAFAWARKGQN
                     LHDYFQRAHDAGCKVMHMAGEVTEALRAADAGADILVAQGTEAGGHVGWMASLPLLPM
                     MVKAVAPLPVLCAGGIADGRGLAAALALGAEGVLLGTRFMATPEAPIHANFKQAIVKS
                     DGHDTVLTEIPDLASQRVWPGAMSRAQRN"
BASE COUNT          410 a          624 c          557 g          409 t
ORIGIN      
        1 gtgaaacgtc ccggagatgg tcgtcagccc gttgggcgcg gcccatttgc ggatcgtatc
       61 cgccacccgt tgcggatcgc cggccaggac aaacccctca gtgatttgcg ttttggcgtc
      121 gcgctgaatc agcaggccga cttctttgcg gtcggtatcc gcggcctgat gaaccacgag
      181 ataattgtcc agataaggcg cggcctcttc gatcgctttt tccagactgc tcgacacgta
      241 aatgtgaaat ttgcccagga tgtccatttt gccggcgtcg tgcccggctt tagctaaatt
      301 atcgcgatag atttttataa acgccggcaa cgcccccggg tcgcgataga ggtacggcag
      361 cgtcatcaag cgaaagccgt tttctccggc ccagcgaaat gaatcctccg tgcgcgcgca
      421 gccgacccaa aagcgcggat gcggccgctg caccggtttg ggatacaccg gaacgttttc
      481 ataattgaaa aactcgccct tgaaattaac cggcttgtcc gaccacgctt gcagcatgac
      541 ctcgacgcct tcatacatgc gcccggtcgc ttccttttga tcgacgcggt attttttata
      601 ttcgtgcgct tcgctgccct tgccgacgcc gaaatccaac cgtccgttgg agatcacatc
      661 gaccatcgca taggactcgg ccaggtcgat ggggttatgc agcggcaaca caccaatcgc
      721 cacgccgagg cgaatttgtt tggttgtgcg cgcgatcgcc gacataaacg tcggcggatg
      781 gggcagatcg ccgccgtaat gggcgaagtg atgctccgtg acccaaatat gatcgtaacc
      841 gagccggtcc atctcttcca tttggccgaa catcttctgg taaaactcgg acaccgagcc
      901 gtcgagatcc ggcacgtagg tcggcagata atgcgatcca aacttggtca cgcccatggc
      961 ttgataaacc tccaaggaat ttccctcaac atataagtgg ctcgcgggca agaagtcaac
     1021 ggaccgagcc taaactcgaa caccaacaat cgtagtaacg cctagtagtt tgcgcgccga
     1081 tttacatcac gctgccgttc gcataggaca gatattagcg cttgatcaat tacctgaatt
     1141 acttctaggg cgggggtgta acccgcgcta gaccaaaggg gatgctcgcc ccttttggaa
     1201 accccatttc gttgttcccg cctcaagagg cggggttagt aggtaatata ggagagatca
     1261 tgattcacac gcgcatttgc gatctgctcg gcatcgacca tcccatcgtg ctcggcggca
     1321 tgggcagcgc caccaccgca accctggtcg ccgaggtgtc caacgccggc ggcttcggca
     1381 ccctcggcac ctcggctttc aacgcggcaa ctctggagaa cgagatcgcc gccattcatg
     1441 agcgcaccga caaacccttc ggcatcaatc accttttgtt tcagacccag gaagatatgt
     1501 tcgcggtcac gctgcgcgcc cgcccggcgg tcgccgcctt cgcctgggcg cgcaaagggc
     1561 aaaacctcca cgactatttt cagcgcgccc atgacgccgg ttgcaaagtg atgcatatgg
     1621 ccggggaagt taccgaagcg ttgcgcgccg ccgacgccgg cgccgatatc ctggtcgcgc
     1681 aaggcaccga agccggcggc catgttggtt ggatggcgtc gttgcccttg ttgccgatga
     1741 tggtcaaagc ggtggcgccg ctgccggtgc tttgtgccgg cggcatagcc gacggccgcg
     1801 gtctcgccgc cgccctcgct ctcggcgccg aaggcgtgct gctcggcacc cggttcatgg
     1861 ccacacccga agcgccgatc catgcgaact tcaaacaagc catcgtcaaa agtgacggcc
     1921 acgacacggt actcacggaa attcccgacc tagccagtca gcgcgtctgg cccggcgcca
     1981 tgtcgcgcgc ccagcgcaat
//
LOCUS       DATIRS010000300         1766 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1302152, whole genome shotgun sequence.
ACCESSION   DATIRS010000300 DATIRS010000000
VERSION     DATIRS010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1766
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1302152"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(190..1413)
                     /locus_tag="VLM90_03725"
     CDS             complement(190..1413)
                     /locus_tag="VLM90_03725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12095.1"
                     /translation="MAEPAKLQLLTRKPGEAGFQLHEIHSSQAHLSYRPRRIAEEFWA
                     ITAQPRSADGGRAYVLKNLQRDRYLLLDSKEFFLWDRFDGSLSLEEIARSYHHSFGAF
                     DYAIIRQFLAKLYQAGLLIERENLALQQSLVRSQTKFWAMGFSSAAKYWRRISFTVAN
                     ADRICAAIYRYGGFILFHPLTLGLTILLAILAGIAALRLSPQAKQFAQLLAATPWRSG
                     AIMLASLLAVSMMHVTVHALACKAYGRRVREIGFFLLQGVLPTFYADVTDIFMSTRRA
                     RVIVDLAGPLVELFWGSVAFFVAYQVQPGVAQAFLFGIGVVLWEGALINLYPFSFLEL
                     DGYNIVADLLAMPTLRQQALALAPQLHRRLLRPNTLTKAEWIQIAYLLLCLVSVVIYL
                     IAHLDFVRGLLPTWK"
     gene            complement(1422..>1766)
                     /locus_tag="VLM90_03730"
     CDS             complement(1422..>1766)
                     /locus_tag="VLM90_03730"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HSQ12096.1"
                     /translation="VVVSKHVSGDVDMVLTRFQRGDFFGEMGLFDNAPRSATANVETD
                     SLLWRLDRSVFHDIFSHHPEMAAKICYRLVTIFIERLRVTNEQTRDAIRWGLEATGYA
                     SGSQSLFGRKST"
BASE COUNT          380 a          485 c          557 g          344 t
ORIGIN      
        1 atgcccttcc ggttagggat tgaagtccgt tgccccctcc ggcatccaga ccatcatccg
       61 cctggatagc gtttttcaac ggtatgacgg acgctgtccg ccgcctggat ccggcgtgcg
      121 tggcaatgag gggcggggga gtctgctttg tttcaacgac taccttattt attgcgagct
      181 gacggtcatt cacttccaag tgggcagcaa gccgcgcaca aagtcgaggt gggcgatcaa
      241 gtatatcact acggagacca agcagagcag cagataggcg atttgaatcc attccgcttt
      301 agttagtgtg ttgggtcgta gcaagcgtcg gtgcagctgc ggtgccagcg ccaaggcttg
      361 ctggcgcagg gtcggcatcg ccaacagatc ggcgacgatg ttgtagccgt ccaattcgag
      421 gaaactaaac ggatagagat taatcagcgc gccttcccag agcacgacgc cgatgccgaa
      481 caagaacgct tgggcgacgc cgggttggac ttgatacgcc acgaaaaaag ccacgctgcc
      541 ccaaaacagt tcgaccaacg ggccggcgag atcgacgatc acccgcgccc gccgtgtcga
      601 catgaagata tcggtgacat cggcgtaaaa cgtcggcaac actccttgca gcagaaaaaa
      661 accgatctca cggacgcgcc gaccgtaagc tttgcacgcc agggcgtgca ccgtcacgtg
      721 catcatcgac accgccaaca gtgaggccaa catgatcgcg ccgctgcgcc atggcgtggc
      781 ggcgagcagt tgggcgaact gcttggcctg ggggctcaag cgcaacgccg cgatgccagc
      841 caggattgcg agaagaattg tcaggccgag ggtgagcggg tggaacagta taaagccgcc
      901 gtagcggtaa atcgcggcac aaatccggtc ggcgttggcc acggtgaagg atattctgcg
      961 ccagtatttt gccgcggaac taaatcccat cgcccaaaat ttcgtctggc tacggactag
     1021 actttgttgc agcgctaagt tttcacgttc gatgagcaag ccggcctggt agagcttagc
     1081 gagaaattgg cggatgatgg cgtagtcgaa ggcgccgaag ctgtgatgat acgatcgcgc
     1141 gatttcttcg agggagaggc tgccgtcgaa gcggtcccag agaaagaact ctttactgtc
     1201 gagtaacagg tagcggtcgc gttggaggtt tttgagcacg taggcgcggc cgccgtcggc
     1261 gctccggggt tgcgcggtga tcgcccagaa ctcctcggcg atgcgccgtg gccggtaact
     1321 gagatgggct tggctgctgt ggatttcgtg gagctgaaag cccgcttcgc caggtttgcg
     1381 cgtgagcagt tggagtttcg ccggttcggc catgatccgg attacgtcga cttgcgaccg
     1441 aacagcgatt ggctgccgga ggcgtagccg gtggcttcca aaccccagcg gatggcgtca
     1501 cgggtctgct cgttggtgac gcgcagccgt tcgataaaaa ttgtcaccag ccggtagcaa
     1561 attttcgcgg ccatctccgg gtggtgtgaa aaaatatcgt ggaaaacact gcggtcgagg
     1621 cgccacagca acgagtcggt ctcgacgttg gcggtggccg agcgcggcgc attgtcgaac
     1681 aatcccatct cgccaaagaa gtcgccgcgc tgaaagcgcg tcagcaccat gtcgacatcg
     1741 ccgctgacat gtttgctgac cacgac
//
LOCUS       DATIRS010000301         2076 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_417608, whole genome shotgun sequence.
ACCESSION   DATIRS010000301 DATIRS010000000
VERSION     DATIRS010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2076
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_417608"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1244)
                     /locus_tag="VLM90_03735"
     CDS             complement(<1..1244)
                     /locus_tag="VLM90_03735"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ12097.1"
                     /translation="MQPVQLFCWHFMAYPYLDKDFDKSGHSGWVTTPNKLWDNNQARG
                     LYQEYIDQLALADELGFDGMVLNEHHQNIYGLMPSPNIIASALTQRSSRGKIVILGNL
                     LPLHLNPMRVAEEYAMLDQMSNGRLIAGFAPGGGPETFNYDIPSANTREKFWEAADLI
                     VRSWTDDGPFAHEGRYYPLRYVNLWPKPLQKPYPPVWIPGSRSPSTMIEVAKRGYCYF
                     LSSRSHGGETHRAQQEFAKVLEDHGDKYHPFRFGILMSVYVADTDQQARAECEEGVWY
                     FLKNCLKGHLRTEGRQLTYGPGVPYIPAAAWREYMKGYKPGRKLLGDVENWEELEASQ
                     SIIVGSPETVTNRIRALIEKAKVGNLLIQFQFGNMPDHLARKNMKLFTEKVAPVLRHD
                     SQKQFTREFPGINIEQSAQAVQ"
     gene            1426..>2076
                     /locus_tag="VLM90_03740"
     CDS             1426..>2076
                     /locus_tag="VLM90_03740"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12098.1"
                     /translation="MKLAVTLKLVALLFVAIGCSGPEAEYARSLAVKSAADIVLRGGK
                     IVTVDGAFAIKQAVAIRDGRFVAVGSDGEIRDYIGQGTRVIDLLGRTVIPGLIDSHIH
                     ATVAGLSWDAELHWELNHTLADGLRQIATATKGKAPGNWIVVGGGWVPTQFAERRFPT
                     RDELDTLAPNHPVYIQYLRQGALLNSAALAALGITSKTVDPAGGKFERNPNTGVLTG"
BASE COUNT          399 a          566 c          651 g          460 t
ORIGIN      
        1 tactgcaccg cctgtgccga ttgctcgatg ttgatgccgg ggaattctct agtgaactgt
       61 ttctgcgagt cgtggcgcag gaccggcgcg actttctcgg tgaacagttt catgtttttg
      121 cgcgccagat ggtccggcat gttgccgaat tggaattgaa tcaatagatt gccgactttg
      181 gctttttcga tcaatgcgcg gatccggttg gtcacggtct ccggactgcc gacgatgatc
      241 gattgcgaag cttccaactc ttcccagttc tcgacgtcgc ccaggagctt gcgtcccggc
      301 ttgtagcctt tcatgtattc gcgccaggcg gcggcaggga tgtagggcac gccgggaccg
      361 taggtgagct ggcggccttc cgtgcgcagg tggcctttca aacagttctt caagaaatac
      421 cagacgcctt cttcgcactc ggcgcgcgcc tgctggtcgg tgtcggcgac gtaaaccgac
      481 atcaaaatgc caaacctgaa gggatggtat ttgtcgccgt gatcttccaa gaccttggcg
      541 aactcttgct gggcgcgatg ggtctcgccg ccatggctgc gcgacgagag aaaatagcag
      601 tacccgcgct tggcgacttc gatcatggtc gacgggctgc gcgagccggg aatccacacc
      661 ggcggatagg gtttttgcag cggcttgggc cagagattga catagcgtag cggatagtag
      721 cgtccctcgt gggcgaacgg tccgtcgtcg gtccaagagc gcacgattaa gtccgccgct
      781 tcccagaatt tttccctggt gttggccgac ggtatgtcgt agttgaacgt ctcagggccg
      841 ccgccggggg cgaagccggc gattaacctg ccgttgctca tctggtcgag catggcgtac
      901 tcctcggcga cgcgcatggg attcaaatgc agcggcaaga gatttcccag gatgacgatc
      961 ttaccgcgcg aggagcgctg agtgagcgcc gaggcgatga tgttgggcga cggcatcaat
     1021 ccgtatatat tttgatggtg ctcgttcaag accatgccgt cgaagcccaa ctcgtcggct
     1081 agcgcgagct gatcgatata ctcttgatag aggccgcggg cctgattgtt gtcccagagt
     1141 ttattgggcg tggtcaccca accgctatgt cccgacttgt cgaagtcctt gtcgagatag
     1201 ggataggcca tgaaatgcca gcagaatagc tgaactggtt gcatcgttca cctcgcggga
     1261 gcgtttagat tcgttgcgaa attttcttgg actatagcga taaacatcgg cacagcgcaa
     1321 ctgaaatacg gcgccggttc gtccagcgag atcggcaaat gccgcattct tggctcgcaa
     1381 atgcgcgggt cgaaaggtag aatcgcaatc cgattaggaa cgttcgtgaa attagctgtg
     1441 acattgaaac tcgtcgcgtt gttattcgtt gccatcggct gctcggggcc cgaggccgag
     1501 tacgcgcgct cgctggcggt taagagcgca gccgatatcg tcttgcgcgg cggcaagatt
     1561 gtcactgtcg atggcgcctt tgcgatcaaa caagccgtgg cgatcaggga tggccgcttc
     1621 gtcgccgtcg gcagcgatgg tgagatccgc gattacatcg gccagggaac tcgcgtcatc
     1681 gatttgctcg ggcgcacggt gatcccaggt ttgatcgatt cgcatattca cgcgaccgtg
     1741 gcggggttga gctgggacgc ggagcttcac tgggagctca atcacaccct tgccgatggt
     1801 ctgcggcaaa tcgccacggc gactaagggc aaagcgccgg gcaattggat cgtggtcggt
     1861 ggtggttggg tgccgacgca gtttgccgag aggcgattcc cgacgcggga cgaactcgac
     1921 actctggcgc cgaatcatcc ggtgtacatc caatacttgc ggcaaggcgc gctgctcaat
     1981 agcgccgcgt tggccgcgct cggcattacg agtaagacgg tcgacccggc tggcggcaag
     2041 ttcgaacgca atcccaacac cggcgttctc accggc
//
LOCUS       DATIRS010000302         1591 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1695969, whole genome shotgun sequence.
ACCESSION   DATIRS010000302 DATIRS010000000
VERSION     DATIRS010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1591
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1695969"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1250)
                     /locus_tag="VLM90_03745"
     CDS             complement(<1..1250)
                     /locus_tag="VLM90_03745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12099.1"
                     /translation="MKHRIAFFSALLFLFLSVASAPGAEVDPKFKPGEELLDAWRTAQ
                     AEEFAAKSLKEDPKSAAALEFDGRVKFYQGRYPEALASLDRALAIESKDPRRQAMKLL
                     TQLTVDVHKLLKRHESAHFILFVDDKRDGILAPLALEALEKSYAVIGAELGYYPKEKV
                     RVEIAPDATSFNAISTLSLRDIEETGAVGICKFNKLMIISPRALSFGYRWLDSISHEY
                     LHYAIVGLTNNQAPIWLHEGMARFYETRWRKPAPAAKDAAEDYLTPANQTLLVQALQK
                     NQFVGFKKMEPSLIHLDTPEQVQLAYAEAASAVDFINQSKGRPGMRELLATLNDKPTP
                     EAIEKVYGMSFDAFESRWKTFLKAKGLKEIEGSRVRKLKVKKDQREDEEVVELREIQS
                     AVARNRTHLADQMLAKGRTVAAVN"
     gene            complement(1258..>1591)
                     /locus_tag="VLM90_03750"
     CDS             complement(1258..>1591)
                     /locus_tag="VLM90_03750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12100.1"
                     /translation="LSQSQQQMQSAMQQMAQRGQLGNMPVTRLFRQGRFMPGGLMVPL
                     PGMPQFPQFDIESGFTGLDTEKFRLPGKDDYKAPRNFREEILDSLKQGIPPQMKDQIE
                     RYFKNLSE"
BASE COUNT          284 a          449 c          494 g          364 t
ORIGIN      
        1 tcattgacgg cggcgacggt gcggcctttg gcgagcattt gatccgccag gtgcgtccga
       61 ttgcgcgcca cggcggattg aatctccctt agctcgacga cttcttcgtc ttcgcgctgg
      121 tcttttttta ccttgagctt gcgcacccgg ctgccttcga tctctttgag gcctttggcc
      181 ttgagaaaag ttttccagcg cgattcgaag gcgtcgaagg acatgccgta gactttctcg
      241 atggcttcgg gcgtcggctt atcgttgagc gtcgcgagca attcgcgcat tccagggcgg
      301 cccttgctct gatttatgaa atcgacggcc gaggccgcct cggcgtaggc caactgcact
      361 tgctcgggag tatccagatg gatgagggaa ggctccattt ttttaaagcc gacaaactgg
      421 tttttctgca atgcttgcac cagcagcgtc tgatttgccg gtgtcaggta atcttccgcg
      481 gcgtctttcg ccgccggcgc cggcttgcgc caacgggtct cgtaaaagcg cgccatgccc
      541 tcgtgcagcc agatcggcgc ctggttattg gtcaggccga cgatggcgta gtgcaggtac
      601 tcgtggctga tcgagtcgag ccagcggtag ccgaagctca gcgctctcgg cgagatgatc
      661 atgagcttat tgaacttgca gatgccgaca gcgccggtct cttcgatgtc gcgcagcgac
      721 aaggtcgaga tggcgttgaa gctggtcgcg tccggcgcga tctcgacccg cactttctcc
      781 ttcgggtagt agcctagttc ggcgccgatc accgcgtagc tcttttccag agcttccaag
      841 gccagaggcg cgagaatgcc gtcgcgtttg tcgtcgacga agaggatgaa atgggcgctc
      901 tcgtggcgct tcaacagctt gtgcacatcg acggtgagct gggttaataa cttcatcgcc
      961 tggcgccgcg ggtccttcga ttcgattgcc aaagcccggt caaggctcgc cagcgcttcc
     1021 gggtaacgac cctgatagaa cttcacccgg ccgtcgaact ccagggccgc ggcggatttt
     1081 gggtcctcct tgagcgactt ggcggcgaac tcttccgcct gggcggtgcg ccaggcgtcg
     1141 agaagttctt cgcccggttt gaacttggga tcgacttcgg cgccgggcgc cgaggcgact
     1201 gaaagaaaca ggaacaagag agcggagaag aacgcgattc ggtgtttcaa gacaggatca
     1261 ctcggagaga tttttgaaat agcgctcgat ctggtctttc atctgcggcg gaatgccctg
     1321 cttgagagag tcgaggattt cttcgcggaa attacgcggc gctttgtagt cgtctttgcc
     1381 gggcagtcgg aatttctccg tgtccaatcc ggtaaagccg ctttcgatat cgaactgagg
     1441 aaactgcggc atgccaggca gcggcaccat cagtccgccg ggcataaagc gaccctggcg
     1501 gaacagccgg gtgaccggca tgttgccgag ctgaccgcgc tgggccatct gctgcatcgc
     1561 cgactgcatt tgttgctgcg actgggagag c
//
LOCUS       DATIRS010000303         1517 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_908962, whole genome shotgun sequence.
ACCESSION   DATIRS010000303 DATIRS010000000
VERSION     DATIRS010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1517
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_908962"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1495)
                     /locus_tag="VLM90_03755"
     CDS             complement(<1..1495)
                     /locus_tag="VLM90_03755"
                     /inference="COORDINATES: protein motif:HMM:NF012879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HSQ12101.1"
                     /translation="MALSVYADAEEKRGPSLFWFSLMARPTTDLSALEKLLYEEIERI
                     QKSSVQDSELSKVRMQLRRQRAQQLYSTRSRANSMGHFAVYYDDPGLINKVWGVYEQI
                     TNTDIQRAAQKYFTESNRTVVTTVRLDSVSEIMSQSMATLYRIFCTVLALATGLALAS
                     PALCQDSAATPPSKVERKNRAPVARDILSVKLPKPVEAKLKNGLTVLIIEDRRAPFVS
                     LQLQIGGAGGLFEPAAMTGLAGVTAQMLREGTKSKTSIQLAEEIDRLGASIGASSSFG
                     SSDTVLSASGLSDNFDDWLGIAFEILLQPSFAADELEKLKQRLRVQLREQRSNANFLL
                     SERFNRAVYGDHPAANVSVTTESLDRLTQDALRNWHRERYAPQNSILGIAGDVRAKEL
                     IAKLEKRLAGWKKSDLKPALPGDPQAASARKIFLVHRPNSVQTTLSLGNIAIDRRSPD
                     YMPMVVMNDIIGGGASARLFLNLREEKGYTYGVYSDFTALRYPGPWRA"
BASE COUNT          295 a          462 c          442 g          318 t
ORIGIN      
        1 cggcgcgcca aggaccggga taccgcaacg cggtgaagtc gctataaacc ccataggtat
       61 agcctttctc ctcgcgcagg ttgagaaaca agcgcgccga agccccgccg ccgatgatat
      121 cgttcatcac caccatcggc atatagtcag ggctgcgccg gtcgatggcg atgttgccca
      181 aggacagcgt cgtctgcacc gagttggggc ggtgcacgag aaaaatcttg cgcgcgctcg
      241 cggcctgcgg atcgcccggc aatgccggct tcaaatcgga cttcttccaa ccggcaagcc
      301 gtttctccaa tttggcaatc agctccttgg cccgcacatc gccggcgatg ccgaggatcg
      361 aattctgcgg cgcatagcgc tcgcgatgcc aattgcgcaa ggcgtcctgg gtgagccggt
      421 cgagggattc ggtcgtaact gacacgttgg ccgccggatg gtcgccgtag accgcgcggt
      481 tgaaacgctc gcttagaaga aaattagcgt tggaacgctg ctcgcgcaac tgcacgcgca
      541 gccgttgctt gagcttctcc aactcatcgg cggcaaaact cggttgcaag agaatttcaa
      601 aggcgatgcc cagccagtcg tcgaagttat cgctcagtcc cgaagcgctc agcaccgtgt
      661 ccgaagagcc gaacgatgag ctggcgccga tcgaagcgcc caatcggtcg atctcctcgg
      721 cgagctgaat gctcgttttg ctcttggtcc cctcgcgcag catttgcgcg gtgacgccgg
      781 ccaggccggt cattgccgcc ggttcgaaca acccgcccgc gccgccgatt tgcagttgca
      841 ggctgacaaa gggcgcgcgg cgatcttcga tgatcaagac ggtcagaccg tttttgagct
      901 tggcttccac aggcttggga agtttcacgc tgagaatgtc gcgcgccacc ggcgcgcggt
      961 tcttgcgctc gaccttactc ggcggcgtcg ccgcgctgtc ctggcagagc gccggcgacg
     1021 ctagtgccaa accggttgcc agcgccagta cggtgcagaa aatgcgataa agtgtcgcca
     1081 tcgattgact catgatctca cttaccgagt ccaaccgtac cgtggtcacc acggtacggt
     1141 tggactcggt aaaatacttt tgcgccgctc gttgaatatc ggtattggtg atttgctcgt
     1201 acacacccca tactttgttg atcaaaccgg gatcgtcgta atagacggca aaatggccca
     1261 tcgagttggc gcgcgaccgc gtgctgtaga gttgctgcgc ccgctggcgg cgcagttgca
     1321 tgcgcacttt gctcaactcc gaatcttgca ccgaggattt ctgaatcctc tcgatctctt
     1381 cgtagagcag tttttccaga gcgctgagat cggtggtcgg ccgcgccatc agactgaacc
     1441 agaacagcga cggaccgcgt ttttcctcgg cgtcggcgta aacgctcaag gccatctcct
     1501 tttccttgac gaacttt
//
LOCUS       DATIRS010000304         1670 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_23936, whole genome shotgun sequence.
ACCESSION   DATIRS010000304 DATIRS010000000
VERSION     DATIRS010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1670
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23936"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            294..1259
                     /locus_tag="VLM90_03760"
     CDS             294..1259
                     /locus_tag="VLM90_03760"
                     /inference="COORDINATES: protein motif:HMM:NF028178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HSQ12102.1"
                     /translation="MEPLPRGANFQRALMLWEIGLHIAGNPNTPYYGPRDICITVGSG
                     SNETIKPWLRLCTGSPILAHGICRGDLEAAMINPSGLLTQAYRGTGIFPQPLPVRIVA
                     VYPSLDHFVYVIHPRTGLKSLAEIKQKKYPLRLSIREDATHSTRVLVDQTLAAYGMTV
                     KDIESWGGSLQLNGGPGDPRRLKAIADESIDAIFDEGLPLWFEAALAGGMKPVTLEDH
                     AFKYLVDDLGWRRYTIAPGRFKGLDQNYTCIDYSGWPIYTRASLPDDDAYKICDAIDA
                     RKEQMFWEDSYTGIGQLGENTDATPRDVPLHPGAVKWYREHGFKV"
     gene            complement(1249..>1670)
                     /locus_tag="VLM90_03765"
     CDS             complement(1249..>1670)
                     /locus_tag="VLM90_03765"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HSQ12103.1"
                     /translation="ALQKGSASIEAVEARETVAESIQVGNPAALGNRALAALRDSQGT
                     AVGLSDDEILEAQALTGRLAGIFAEPAAATSVAAAKKMRGSGTIGRDEVVVCHLTGHG
                     LKQPEAIQFAEQDFAPIAPTLPALREQLKRCAGDAKP"
BASE COUNT          336 a          564 c          450 g          320 t
ORIGIN      
        1 ccgcttcaag aaaatttatc gcgccaagca tgtcctgagc aaaatcgaag ggacgccaag
       61 cacgcaacga aaaattcctt gtcatttcga ccgaagggag aaatctttct tagatccctc
      121 gcggtcactc gggatgacgg gcatcggccc aacacctttg cggccttagc gcctttgcgg
      181 gagacattcc ggattccctc tgccgctatc ccttcgtggt gaaaactgtt gacacaacca
      241 ccgcgcgctc actaaggtaa cctgcgacat caatttcaat tggaggtcag accatggaac
      301 cactaccgcg cggcgccaac tttcaacgag ccttgatgct ctgggaaatc ggcctgcata
      361 tcgccggcaa tcccaacacc ccctactacg gcccgcgcga tatctgcatc accgtcggca
      421 gcggctccaa tgaaaccatc aaaccctggc tgcgcctgtg caccggctcg ccgatcctcg
      481 cccacgggat ttgccgcggc gatctcgaag cggcgatgat caatccttcc ggcctcctca
      541 cccaggccta ccgcggcacc gggattttcc cccagccgct gccggtgcgc atcgtcgcgg
      601 tctacccttc cctcgaccat ttcgtttatg tcatccatcc gcgcaccggg ctgaagtccc
      661 tggctgaaat caaacagaag aaatatccgc tgcgcctatc gatccgcgag gacgcgactc
      721 attcgactcg cgtgctggtc gaccagacgc tcgctgccta tggcatgacg gtgaaagata
      781 tcgagtcctg gggcggcagc ttgcaactca acggcggccc cggcgatcca cgccggctga
      841 aagcgatcgc cgatgaatcg atcgacgcaa tcttcgacga gggcttgccg ctctggttcg
      901 aggccgccct tgcaggcggc atgaagcccg tgacgctgga agatcacgcc ttcaagtatc
      961 tggtcgacga cctcggctgg cgccgctaca cgatcgcgcc ggggcgcttc aaaggactag
     1021 atcagaatta tacttgcatc gattacagcg gctggccgat ctacacccgc gcgtccttgc
     1081 ccgacgacga cgcgtataaa atctgcgacg ccatcgacgc ccgcaaggag cagatgttct
     1141 gggaagactc ctacaccggc atcggccagt tgggcgaaaa caccgacgct acgccgcgcg
     1201 acgtaccgct ccaccccggc gcggtaaaat ggtaccgcga gcatggcttc aaggtttagc
     1261 atcgccggcg caacgtttca gttgctcgcg caacgccggt aaagtcggcg cgatcggggc
     1321 aaaatcctgc tcggcaaatt gaatcgcttc gggctgcttc aacccatggc cggtgagatg
     1381 gcagacgacg acttcatcac ggccgatagt cccgctcccg cgcattttct tggcggcagc
     1441 caccgaggtc gccgccgccg gctcggcgaa gattcccgcc agtcgccccg tcaatgcttg
     1501 cgcttcgagg atttcatcgt cacttaaccc caccgcggtt ccttgtgaat cgcgcaacgc
     1561 cgccagggcg cggttgccca aggcggccgg attgccgact tgaatactct cggccaccgt
     1621 ctcgcgcgcc tcgacagctt ctatcgacgc gctgcctttt tgcagcgccg
//
LOCUS       DATIRS010000305         1701 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1499298, whole genome shotgun sequence.
ACCESSION   DATIRS010000305 DATIRS010000000
VERSION     DATIRS010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1701)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1701)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1499298"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..819
                     /locus_tag="VLM90_03770"
     CDS             <1..819
                     /locus_tag="VLM90_03770"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12104.1"
                     /translation="QDMDEAGVDVSVLSCLLGWSAPLDECRFINADLAAIQKKYPRRF
                     VGLAQAPVLEGKSAIAELRRAIADLGLHGVTITSQVNGLVLDSPKLYDLYELACELDA
                     PVFVHPALVPTGYEHLKDYDLPRVLGREVDLTVATTRLIAGGIYDRYPDLKIVMAHFG
                     GGIAAVKDRLVGKGYRFGTLKKPFGEYYDLVYFDMAGFEGGTTALNCALAGIRPERLV
                     FASDYPQDFTGVNTDTGKGMTELRKYIEAVRQLPLSEKNREDMLGGTAARLLRI"
     gene            complement(841..1401)
                     /locus_tag="VLM90_03775"
     CDS             complement(841..1401)
                     /locus_tag="VLM90_03775"
                     /inference="COORDINATES: protein motif:HMM:NF019844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HSQ12105.1"
                     /translation="MSLSVRNMNRWRIALALALLLPACKKAEEAASPDDLPDLNKQIR
                     PYVTVENTKVRSGPGPQFRGLADIPANAKVHVVGRDGDWALIVSKKGNAPGFVELAAI
                     KPGEGEAEKPEFGEPKRVEGKYEAVADTQVRSGPVLHYPSLADIAKGTKLNVVDEEKG
                     WLKVESKRGNKPGYVEASLAKPSDEK"
     gene            complement(1498..>1701)
                     /locus_tag="VLM90_03780"
     CDS             complement(1498..>1701)
                     /locus_tag="VLM90_03780"
                     /inference="COORDINATES: protein motif:HMM:NF020489.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonyl-tRNA synthetase editing
                     domain-containing protein"
                     /protein_id="HSQ12106.1"
                     /translation="KNIVLHSFTHLGGATAPAELAEILISTLQQRLSATGYQVWATPF
                     GYFCEWDLSVYGESSAKVWKEIH"
BASE COUNT          324 a          499 c          485 g          393 t
ORIGIN      
        1 caagacatgg acgaggcggg cgtggatgtc tcggttttat cctgcctgct cggctggtcg
       61 gcgccgctcg acgaatgccg ttttatcaac gccgatctgg cggcgattca aaaaaaatat
      121 ccccgccgat ttgtcggctt ggcccaggcg ccagttcttg aggggaaatc cgccatcgcc
      181 gaactgcgcc gggcgattgc cgacttgggg ctgcatggag tgacgatcac ctcgcaggtg
      241 aacggccttg tcctcgactc gccaaagctt tacgacctgt atgagctggc ttgcgagctt
      301 gacgctccgg tgtttgtcca tcccgccttg gtgcccaccg gctacgaaca tttgaaggat
      361 tacgatctgc ctcgcgtact gggccgcgaa gtcgatttga ccgtggcgac gacgcgcttg
      421 attgccggcg gcatttacga tcgttatccg gatttaaaga tcgtcatggc tcatttcggc
      481 ggcggcatcg ccgcggtaaa agaccggcta gtcggcaaag gctaccgctt cggcacgctc
      541 aagaagccgt tcggcgaata ttacgacttg gtttatttcg acatggccgg cttcgaaggc
      601 ggcaccaccg cgctcaactg cgccctcgct ggcatccgcc ctgagcgttt agtgttcgcc
      661 agcgactacc cgcaggactt cacgggtgtg aacaccgaca cgggcaaggg aatgaccgag
      721 ctgcgcaagt atatcgaagc cgtgcgccaa ttgccgctca gcgagaagaa ccgggaagat
      781 atgctcggcg gcacggcggc gcggttgttg aggatctaac ctcgacgagc gatttgagcg
      841 tcatttttcg tctgacggtt tcgctaaact cgcctcgacg tagccgggtt tgttgccccg
      901 tttggattcg actttcaacc agcctttttc ttcatcgacg acgttgagct tggtgccttt
      961 ggcaatgtcg gcaagcgacg gataatgcag tacgggtcca ctgcgcacct gggtgtcggc
     1021 caccgcttcg tatttacctt cgacccgctt tggttcgccg aattccggtt tttcagcttc
     1081 gccttcgccc ggcttgatcg ccgccagttc gacgaatccc ggagcattgc ctttcttcga
     1141 gacgatcagc gcccaatcgc cgtcgcggcc gacaacatgg accttggcgt tggccggaat
     1201 atcggcaagc ccgcgaaact gcggtccggg gccgctgcgc actttggtgt tctccacggt
     1261 gacgtaaggg cggatctgtt tgtttaggtc gggaagatcg tcggggctcg ccgcttcctc
     1321 ggcctttttg cacgccggca gcagcaaggc gagcgccaac gctatcctcc agcgattcat
     1381 attcctgact gaaagtgaca tggatatcct cccaagatct gttctccgcc attattatta
     1441 taacacgctg gaaaatctta gctgagattt cgcaggggcc caaaggggcc gctgccgtta
     1501 atgaatctct ttccaaacct tggcgctact ctcaccgtag acgctcaagt cccactcgca
     1561 aaaatagccg aacggcgtgg cccagacttg gtagccggtt gcgctcaagc gttgctgcaa
     1621 tgtcgaaatc aatatttccg ccaactccgc cggagcggtt gcgccgccca aatgggtgaa
     1681 cgaatggagc acgatatttt t
//
LOCUS       DATIRS010000306         4308 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_122385, whole genome shotgun sequence.
ACCESSION   DATIRS010000306 DATIRS010000000
VERSION     DATIRS010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4308
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122385"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..227)
                     /locus_tag="VLM90_03785"
     CDS             complement(<1..227)
                     /locus_tag="VLM90_03785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12107.1"
                     /translation="MIAETFAFVRSLARASLLCLFMLLSLMPSTSTAAQSARELKEVK
                     VAYPPSMASVTLMTGIKQRFFDEQGLRPVLLV"
     gene            complement(404..742)
                     /locus_tag="VLM90_03790"
     CDS             complement(404..742)
                     /locus_tag="VLM90_03790"
                     /inference="COORDINATES: protein motif:HMM:NF024845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-TFIIB domain-containing protein"
                     /protein_id="HSQ12108.1"
                     /translation="MNCPKCQAATLAEFKVEGVAVDRCSTCAGIWFDAQELSRLLAED
                     ARQVAELRRGGNDARLDDKRGRCPRDSAELLRMYGAIDRSVTLDACADCHGIWLDAGE
                     FAKLFAARRP"
     gene            1071..2087
                     /locus_tag="VLM90_03795"
     CDS             1071..2087
                     /locus_tag="VLM90_03795"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HSQ12109.1"
                     /translation="MLPEISRDKQLAILRRMLMIRRAEEHCIRFNDEHTGLIRGHFHV
                     YIGQEATGVSVCDWLNADDYVFTTHRNHGHVIAKGGDPKKVLAEIIGRATGYCQGRAG
                     TFHVAAPEVGVIHTSAIVGGCLALAGGTAYAAQVKASKAITVVFFGDGAMEEGVFYEA
                     LNIAKLWQLPLIFWMENNYRRSGRGAGHAATELTNVAKALNVETTVIDGIDVGTVHKT
                     AKDIVSRVRKGEGPLFVEARTHLWPGNAFNMPKLVGGVTDIAWAWDASKAPENVRDWH
                     KDHDPILNYLRELAGAGISRAELEKLDAEVSQETDAAARFALESPLPDAKAALNYAFA
                     GKGN"
     gene            2090..3064
                     /locus_tag="VLM90_03800"
     CDS             2090..3064
                     /locus_tag="VLM90_03800"
                     /inference="COORDINATES: protein motif:HMM:NF014798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HSQ12110.1"
                     /translation="MPQEMTFGEALLAAIDEVAEHDKRIVLFNPSFAGEAGHEKLAAF
                     RKKYAARIKFPPIAEIGFCGIAIGAAMAGLRPVVDISTATFSYEAIPQIVNEAAIAYS
                     NSGGQTNVPVVFYMKFGIRGGGGVQHSGSPQSWYWNTPGLQVVMPSTPADAKGLMRTV
                     LTKSEDPTIFFGHDRLLDDLGEVPDGVHEIPLGKADIKRAGKDVTIIATSIQVPRALA
                     AAETLAKEGISAEVIDPRTLQPLDKPALLASVKKTGRVLITDESHDNCGVAAGLAAII
                     ADEGFTSLRAPIKRVSIPPVPVPYAVPLEDYVTPMAQRIVEAARALCQ"
     gene            3186..3467
                     /locus_tag="VLM90_03805"
     CDS             3186..3467
                     /locus_tag="VLM90_03805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12111.1"
                     /translation="MIPARRVIFTIVALIAIALLRHDGFTQQSAPGTTTVLTGATLID
                     GTGRAAIPESVIVIDDGKFTAVGGKGTNFPANANVITKPISRSLQWAVK"
     gene            4045..>4308
                     /locus_tag="VLM90_03810"
     CDS             4045..>4308
                     /locus_tag="VLM90_03810"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSQ12112.1"
                     /translation="MQTIRDILKVKGSDVWCVEPDATVFDALQRMAEKEVGALVVTEG
                     AQVVGLISEREYARKVVLEGRTSPTTLVKEIMITPVMYIHLDQT"
BASE COUNT          987 a         1312 c         1214 g          795 t
ORIGIN      
        1 accagcagaa ccggccgcag cccttgctcg tcgaaaaatc gctgcttgat ccctgtcatc
       61 aaagtcaccg acgccatcga cggcgggtaa gcgactttga cctccttcaa ctcgcgcgcc
      121 gactgcgccg ccgtcgacgt agacggcatt agcgataaca gcatgaacag gcaaagcagc
      181 gaggctcggg cgagcgatct aacgaaagca aacgtttcag cgatcatgcc atgccccctt
      241 gtagaaactg gaatttgcaa tctacgtcgc gtagaaccct tgccgttgca ggttccaacc
      301 tgcggcgcca acacaacttc gcgccttacc attcgttcag tctcctcacc gaagtagcct
      361 ttcggcttgt aacatggctc aacgccgact cacaattgaa ttgtcacggc cgccgcgcgg
      421 cgaacagctt ggcgaattcg ccggcatcga gccagatgcc atgacaatcg gcacaagcgt
      481 ccaaggtcac gctgcgatcg atagcgccgt acatccgcaa cagctccgcc gagtcgcgcg
      541 gacagcggcc ccgtttgtca tccagccgag cgtcgttacc gccccggcgt aactccgcca
      601 cttggcgcgc atcttcggcg agcagccggc tcagctcctg agcgtcgaac catataccgg
      661 cgcaagtgga acaacggtcc accgcgaccc cttcgacctt aaattccgcc agcgtggcgg
      721 cttggcactt tggacaattc atcgatatca cgactcaact ttctcgcaga agttctgtaa
      781 acgctaaagc aaagccacgg gcagttcaag caaaaccgag ctgtcggcgc aatgaccaaa
      841 ttcaatctca ccacgacggg actaaggaca cgaagatgag agggcgggtt tcaaaccagt
      901 ccctacgggg acaagctagc ggcagacaaa tggatttcct taattcttgc cttttgaatt
      961 tttccttttg ccctgccccc accattctcc attgtccatt tttcctcttt gcaattcggc
     1021 aaaaccggca gtaagtatgc accaaacgca acaaaccgag ggaggaaccc atgctacccg
     1081 agatttcccg agacaagcag ttggccattc tacgccggat gctgatgatc cggcgcgccg
     1141 aagaacattg cattcgcttc aacgacgagc acaccggtct gatccgcggc cactttcatg
     1201 tgtacatcgg ccaggaagcc accggcgtat cggtgtgcga ctggttgaat gccgacgatt
     1261 atgttttcac cacccatcgt aaccatggcc atgtcatcgc caagggcggc gacccgaaga
     1321 aagtcctggc cgagatcatc ggccgcgcca ccggctactg ccaaggacgc gccgggacat
     1381 ttcacgtcgc cgcgcctgaa gtcggcgtca tccacacctc cgccatcgtc ggcggttgcc
     1441 tcgcgctggc cggcggcacg gcgtacgcgg cgcaagtcaa agcgagcaaa gcgatcaccg
     1501 tggttttttt cggcgacggc gccatggagg aaggcgtctt ctacgaagcc ttgaacatcg
     1561 ccaagctctg gcaactgccg ctgatctttt ggatggaaaa taattatcgc cgcagcggcc
     1621 gcggcgcagg ccatgccgcc acggaactca ccaacgtggc gaaagccttg aacgtcgaaa
     1681 ccaccgtcat cgacggcatc gatgtcggca cggtgcacaa gaccgccaaa gatatcgtca
     1741 gccgcgtgcg caaaggcgaa gggccgctgt tcgtcgaagc gcgaacccat ctatggccgg
     1801 gcaacgcgtt caatatgcca aagcttgtcg gcggcgtgac cgatatcgcc tgggcctggg
     1861 acgccagcaa agcgccggaa aacgtccgcg actggcacaa ggaccacgat ccgattttga
     1921 actatttgcg cgagctcgca ggcgccggca taagccgcgc cgagctcgaa aagctcgacg
     1981 ccgaggtaag tcaggaaacc gatgcggcgg cgcgcttcgc tctggagagc ccgctgccgg
     2041 atgccaaggc ggcgctcaac tacgccttcg cgggaaaggg aaactagcca tgccgcaaga
     2101 aatgactttc ggtgaagcgc tgctagccgc cattgacgag gtggcagagc acgacaaacg
     2161 tatcgtgctg tttaacccga gcttcgccgg cgaagccggc cacgaaaagt tagccgcgtt
     2221 ccgcaaaaaa tatgcggcgc gcataaaatt cccgcccatc gccgagatcg gcttctgtgg
     2281 catcgccatc ggcgccgcca tggccggcct gcgcccggtg gtcgacatta gcaccgcgac
     2341 cttttcctac gaagcgatcc cgcagatcgt caacgaagcg gccatcgcct actccaactc
     2401 cggcggacag accaacgtgc cggtggtttt ttatatgaag ttcggcatcc gcggcggcgg
     2461 cggcgtgcag cattccggca gcccgcagtc gtggtattgg aacacgcccg gcttgcaggt
     2521 cgtcatgcca tcgactccgg ccgacgccaa ggggctcatg cgcacggtgt tgaccaagag
     2581 cgaagacccg acgatcttct tcggccatga ccggctgctc gacgaccttg gcgaagtgcc
     2641 ggacggagtc cacgaaatcc ccctaggcaa agccgatatc aagcgcgccg gcaaagacgt
     2701 gaccatcatc gccacatcga tccaagtgcc gcgcgccttg gccgcggcgg aaacgcttgc
     2761 gaaggaaggc atctccgccg aagtcatcga cccgcggacg ttgcaaccgt tggacaaacc
     2821 ggcgttgctc gcgtcggtga aaaaaaccgg ccgcgtgctg atcaccgacg aaagccatga
     2881 caactgcggc gtcgccgccg gcttggccgc gatcatcgcc gacgaaggct tcaccagtct
     2941 gcgcgcgccg attaaacgcg tgtcgattcc gccggtaccg gtgccctacg ccgtgccgtt
     3001 ggaggactac gtcacaccga tggcgcaacg gatcgtcgaa gcggcgcggg cgctgtgtca
     3061 atgatttgaa gatgagtcgg actcggggta tggccgcaga gaatgcaaag ggcgcaaaaa
     3121 aggaatcggg attcgttgag gcgggattga aatctccctc tgcaattcag tgcaaggagg
     3181 caagaatgat acctgcacga cgggtaattt tcacaatcgt tgccttgatc gctattgcgc
     3241 tgctgcgcca cgatggtttt acccagcaga gcgcaccggg cacgacgacg gtattaaccg
     3301 gcgcgacgct gatcgacggc accggtagag cggcgatccc ggaatcggtg atcgtcatcg
     3361 acgatggcaa gttcaccgcg gtgggcggca aaggaacgaa ttttcccgcc aacgccaacg
     3421 tcatcacaaa gccaatctcg cggtcactcc agtgggcggt gaagtgatcg acggcctcgt
     3481 cgcgggcttg ttcaaactcg acgctgggat ggtcgcgaaa ttgaagagcg tgttggtgcc
     3541 gtagacgacg aaaaccggcc ctccgccgtc gtgacgctga ttagcgggct gtgctgtgat
     3601 gaatttgcgc cggggttacg acgatctgtt catgaacgcg gccgccaggc tggggaagga
     3661 aactcgccta ccatttgaca gaatcagcaa tcggcatagt cgtgccaatt gattggctca
     3721 ggagtataat ctccggaacc gctatgcgcc gcgcagctcg acaacaataa aacgatgaaa
     3781 agcagggcca acaactcggc agagaacttc attgactttc acccctcccg acaagaacac
     3841 tacgctgact gatcgtgccg aaccagagtg cttaacggga gcatatccat gccgggaatc
     3901 agagccaatt aatttttacc cggattgctt ttatctcgga tatcgcacca gccgcaactg
     3961 attatggaga caaatatgga attgcgcgct catttggttg tataagtcgt tcccagtccc
     4021 gactgcgtcg aatggaggtc gcccatgcag acaatccgag acatcctaaa ggttaaagga
     4081 agcgatgttt ggtgcgtcga gcctgatgcc acggtattcg acgcgctcca acgcatggcc
     4141 gaaaaggaag tcggcgccct ggtggtcacc gaaggcgcgc aggtcgtcgg cctcatttca
     4201 gagcgcgaat acgcgcgcaa agttgtactc gagggccgca cttctccaac cacgctggtt
     4261 aaggaaatca tgataacccc tgtgatgtat attcatctcg accaaacg
//
LOCUS       DATIRS010000307         2461 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_319561, whole genome shotgun sequence.
ACCESSION   DATIRS010000307 DATIRS010000000
VERSION     DATIRS010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2461
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_319561"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            225..521
                     /locus_tag="VLM90_03815"
     CDS             225..521
                     /locus_tag="VLM90_03815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12113.1"
                     /translation="MRQLLTKLRPLVVAGGTAAVGALRRRFGDLRSDDSANRLTALEK
                     GFEIQNELNATMDVQITVLQAQLAKLRKTVQFLLIALIATATIAAIALAAAFMR"
     gene            588..>2461
                     /locus_tag="VLM90_03820"
     CDS             588..>2461
                     /locus_tag="VLM90_03820"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSQ12114.1"
                     /translation="MPLFRLDNISHAYGHIPLLSQVGFQIDAGERVCLVGRNGTGKTT
                     LFRVIAGQLLPDEGEIWRAESLRVAHLEQEVPPDTDQSVFEVVAGGIGEIGALLAEYH
                     NLTHGGQLANRDSLLQLARLQARIETLGGWNINQRVETVLTRLNLPEDKRLADCSGGI
                     RRQVMLARALASEPDLLLLDEPTNHLDINAIDWLERYLLNYQGAVMFITHDRTLVRRL
                     ATRIVELDRGKLTSFPGDFDRYLQKKDELLAIEERASAKFDKKLAEEEAWIRRGVKAR
                     RTRNEGRVRELQALRKEKADRLDAQGKARFTLDAGASSGKLVVDLRRVGFHYGENAII
                     RELSTRIMRGDRVGIIGPNGSGKSTLLKLILGELAPTSGEVLLGTRLQVAYFDQHRRT
                     LDPEKTVRANLSDSDIVTVRGRSRHVVGYLKDFLFPPQRIDSPVNALSGGERNRLLLA
                     KLFTQSANLMVLDEPTNDLDVDTLELLEELLSEYEGTLLLVSHDRTFLDNVVTSTLVF
                     EGDGKFTEYAGGYEDWARYQRQIPDAPGEINKRANGVAMPPPADSKRTEKPRKLSYKE
                     QRELTALPEKIEALEAEAAELNSRLVPLRLGLRRLAAGFRRSCGRRQAEAERAPRDLG
                     L"
BASE COUNT          525 a          719 c          735 g          482 t
ORIGIN      
        1 tgaattatca cgatccataa agatggttgt tcaaaacgtt ccaaacgttc aagccgttca
       61 aaacgtattc tcaggaaatg gatcggatcg atcgagttga aggaattctt cgcccccagc
      121 ttgatcaacg atatcctgcg ctaaagacac cggcgcggcg agtttatccg ggccggcgat
      181 tagggtaaga tcccaatcgt gaccgtgcta ccaagaatct agcgatgaga cagttattga
      241 cgaaattgcg accgctggtg gtggctggcg ggacggcggc ggtgggagcc ctacgtaggc
      301 ggtttggcga cctgcgatcc gatgacagcg cgaatcggct aacagcgctg gagaagggtt
      361 tcgagattca aaacgagctc aacgcgacca tggacgtgca gatcacggtg ttgcaggcgc
      421 aactggccaa gctgcgcaag accgtgcaat ttctcctcat cgccctgatc gccaccgcga
      481 caattgccgc gatcgctttg gccgcggcgt tcatgcgcta atggcgtcgt agcccgcgcc
      541 gattgtgcgg caaaaattcc ctgtcacgat aggaaccata ttcaagcatg cctctgtttc
      601 gcctcgataa catctcccac gcctacggcc atattccatt attgtctcag gttggttttc
      661 agatcgacgc cggcgagcgg gtctgtttgg tcgggcgcaa cggcaccggc aagaccacgc
      721 tgttccgcgt gatcgcggga cagttgttac cggatgaggg cgaaatctgg cgcgccgagt
      781 cgttgcgcgt ggcgcacctg gaacaagaag tgccgcccga caccgaccag tcggttttcg
      841 aagtcgtcgc cggcggcatc ggcgagatcg gcgcgctatt agcggaatat cacaatctaa
      901 cccatggtgg tcagctggcg aatcgcgact cgttgctgca gctggcgcgc ttgcaagcca
      961 ggatcgagac cctgggcggc tggaacatca atcaaagagt cgagaccgtg ctgacaagat
     1021 tgaatctgcc tgaggataag cggctcgccg attgttccgg cggcatacgc cgccaggtga
     1081 tgctcgcccg cgcactcgcc agcgagcctg atttattgct gctcgatgag ccgaccaacc
     1141 atctggatat caatgccatc gattggctgg aaagatatct gctcaattac caaggcgcgg
     1201 tcatgttcat tacccatgac cggactctgg tccggcgctt ggcgacgcgc atcgtcgagc
     1261 tcgaccgcgg caagcttacg tcgtttcccg gcgatttcga tcgctactta cagaaaaaag
     1321 acgagctctt ggcgatcgag gaacgggcgt cggccaagtt cgacaaaaag ctcgccgagg
     1381 aagaggcgtg gattcgccgg ggcgttaagg cccgccgtac ccgtaacgaa ggccgggtgc
     1441 gagagcttca agcgctgcgt aaagaaaaag ccgaccgcct ggatgcccag ggaaaggcgc
     1501 gtttcaccct cgacgccggc gcgtcctcgg gtaagctggt cgtcgacctg cgccgggtcg
     1561 ggtttcacta tggtgagaat gcgatcattc gcgagctctc gacaagaatc atgcgcggcg
     1621 accgtgtcgg catcatcggc cccaatggtt cgggcaagag cacgttgctc aaattgatcc
     1681 tgggcgagct ggcaccgact tctggcgaag tgttgttggg cacccggctg caggtggcct
     1741 acttcgatca gcatcgccgc accctcgacc cggaaaaaac cgtgcgcgcg aacctgagcg
     1801 attcggatat cgtcaccgtg cgcggccgct cgcgccatgt ggtcggctat ttgaaggatt
     1861 ttctgttccc accccagcgc atcgactcac cggtgaacgc gctgtccggc ggcgagcgca
     1921 accgtttgct gttggcgaaa ctatttactc aatcggccaa tttgatggtg ctcgacgagc
     1981 cgaccaacga tctcgatgtc gataccttgg aactgctcga agaactcttg tccgaatacg
     2041 aaggcacgct cctgttggtc agccacgatc gcacctttct cgacaatgtc gtcaccagca
     2101 cgctggtctt cgaaggcgac ggcaagttca ccgaatacgc cggcggctac gaagactggg
     2161 cgcgctacca gcggcaaatt cccgacgcac ccggtgaaat aaacaagcgc gccaatggcg
     2221 tcgcgatgcc gccaccggct gacagcaagc gaactgaaaa gccgcgcaag ctcagctaca
     2281 aagagcagcg tgaattgacg gcgttgccgg agaaaattga agcccttgag gcagaggcgg
     2341 cggagctcaa ctcgcgcctg gttccgcttc gccttggcct tcgacgcctt gccgctggat
     2401 ttcgcaggag ctgcgggcga cgtcaggccg aagccgaacg ggctccgcgc gatctcggcc
     2461 t
//
LOCUS       DATIRS010000308         1546 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1892297, whole genome shotgun sequence.
ACCESSION   DATIRS010000308 DATIRS010000000
VERSION     DATIRS010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1546
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1892297"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..716
                     /locus_tag="VLM90_03825"
     CDS             <1..716
                     /locus_tag="VLM90_03825"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HSQ12115.1"
                     /translation="MRTIKSSAEIERIHFASTLTDQSIQALAEGLREGMREDEIPALI
                     EPAYLKAGGYAGIHFISSMPMRSPDFCVPSQFHSSRKLQKGDALISEISGAYCGYSGQ
                     IHRTFSIGEGPTPEWQKMHDAAMEVFDVLSKVIKDGATTTEAEEAAEIIHRRGYSTYD
                     DLVHGVNQYPPIFQTKTRKRHDSREITFRENMVIVIQPNLMTYDEKMGLQFGETLVVK
                     KNGCESLNGYPRQWVTCMG"
     gene            complement(802..>1546)
                     /locus_tag="VLM90_03830"
     CDS             complement(802..>1546)
                     /locus_tag="VLM90_03830"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HSQ12116.1"
                     /translation="HAVALWIALLVCRGIPDVSWWVLFLFFLSGLLQPVLRFLTYAGI
                     HLVGAAAGTTLRGSHPLFSTSLAIFFLGEPVSLSVIAGTTLIVAGVTLISWQADQRVE
                     SCRWWHLAYPLGAAVLAGVSHPLRRYTLSLANEPLYLAAVIGIVALPWLASATLLPGQ
                     KQKPVWDRRALGPFLLAGTFETLGILLVILALSVGHVVVVSPIVATSPLWIVLGTWLF
                     LRGIENLTLKTIIGAVCVVSGTVVISLVR"
BASE COUNT          401 a          472 c          432 g          241 t
ORIGIN      
        1 tgatgcggac gatcaaaagc tctgccgaga tcgaacgcat ccacttcgcc tccacgttga
       61 cggatcaatc gattcaagcg ctggccgaag ggctccgaga aggtatgcgc gaagacgaga
      121 taccggcgct catcgaaccc gcttatctca aggcgggcgg ctacgccggc attcacttca
      181 tcagcagcat gcccatgcgc agccccgact tctgcgtgcc gtcacaattc cattccagtc
      241 gcaagctgca aaaaggcgac gccttgatca gcgaaatcag cggcgcctac tgcggctaca
      301 gcggccagat tcatcgaacc ttttccatcg gcgaagggcc gacgccggag tggcagaaaa
      361 tgcacgacgc cgccatggaa gttttcgatg tattgtccaa ggtgattaaa gacggcgcga
      421 cgacgaccga ggcagaagaa gccgccgaga tcatccaccg gcgcggctac agcacctacg
      481 acgacctggt gcacggcgtc aatcaatatc cgccgatctt ccaaaccaag acgcgcaaac
      541 gccatgactc ccgcgaaatc accttccgcg aaaacatggt cattgtcatc cagcccaatc
      601 tgatgaccta tgacgaaaaa atgggcctgc aattcggcga aacgctggtc gtcaagaaaa
      661 acggctgcga gagtttgaat gggtacccgc ggcagtgggt aacctgcatg ggctaattct
      721 tcacgatact ccatcactcc tttactccaa ctaccgcccg tatgagtgtt gaagtgatgg
      781 agtattggac taatggaaag atcaccgcac cagcgagatc accacagttc cgctgacaac
      841 gcagaccgcg ccgatgatgg ttttcagcgt caggttttca atgccgcgca gaaacaacca
      901 agtgccgagc acgatccata gcggactcgt tgcgacgatc ggtgagacca cgacgacgtg
      961 accgacgctc agcgccagaa tcaccagtag gatgcccagc gtttcaaaag tgccggcaag
     1021 aagaaacggc ccgagggcgc gccggtccca gactggcttc tgcttttgtc ccggcagcaa
     1081 ggtggcactg gccaaccaag gaagagcgac gatgccgatg accgcggcaa gatagagcgg
     1141 ctcattggcg agactgagcg tgtagcggcg caacgggtgg ctgacaccgg cgagcacggc
     1201 ggcgcccaac ggataggcta gatgccacca acgacacgat tccacgcgct gatccgcctg
     1261 ccaggagatc agcgtcacgc cggcgacgat caaggtcgtc ccggcgatca ctgacaaact
     1321 aaccggctcg ccgaggaaga aaatcgccag cgaggtgctg aacagcggat gggaaccgcg
     1381 caaagtcgtt cccgccgccg cgccgaccag gtgaatgccg gcataggtga ggaaacgcag
     1441 caccggctgc aacaaaccgc ttaagaaaaa taaaaacagc acccaccagg agacatccgg
     1501 aatgccacga cacaccagca gcgcgatcca cagcgccacc gcatgg
//
LOCUS       DATIRS010000309         3124 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1597974, whole genome shotgun sequence.
ACCESSION   DATIRS010000309 DATIRS010000000
VERSION     DATIRS010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3124
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1597974"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..543
                     /locus_tag="VLM90_03835"
     CDS             <1..543
                     /locus_tag="VLM90_03835"
                     /inference="COORDINATES: protein motif:HMM:NF039910.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12117.1"
                     /translation="IKATFTRTVSAGSFMTKSFFLFPNMNKVGYHLNEDHPAAFAATH
                     EGYEALRWRVPVDDTNTMHFTLYFAPIVNGKVTAKIPKDQSAEGLGDSVLGKYRWDEA
                     TGWIARGDQDRCAQESQGPIFDRSGEHLGVSDEGVIQLRRMFRDCIEAVQGGQDPVGV
                     VRDPLKNKMITIVPGEIQVA"
     gene            739..1830
                     /locus_tag="VLM90_03840"
     CDS             739..1830
                     /locus_tag="VLM90_03840"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ12118.1"
                     /translation="MKQFITRVSRLSLVLAALTFVSESYLAAQETLDSLIAAAKKEDE
                     LVFIAGTSTFGGRKGLADLEAAFNKRFGTKMKISFAAGPDMNARAARHITEIKSGRKV
                     SSDIFLGSQSHQALMHKENALEKVNYAGIFSWVSKDMEIFPGETVLTYTSPNGIVYNK
                     DLIPKDKAPKNYADLIDPKLSPAWAGKIAIPPYVAWLAELSLIWGTEKVKDFTRKLVG
                     ISAGCLRYSEEERVVSGEFPIMANFGDALSAMWTWQPKGAPLVAVPGVTPINTDYFQL
                     SAPKNAPHPNLAKLFVAFMATREAQTILQKYESRSSHLVEGTIMQKYLKENKIAVQEP
                     KLSIGYYLKGETDEGLQFKEELAKILKGS"
     gene            2008..>3124
                     /locus_tag="VLM90_03845"
     CDS             2008..>3124
                     /locus_tag="VLM90_03845"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSQ12119.1"
                     /translation="MLSTEENETLTRVGPATPAGAMLRRYWWPVGFTEHVQIKGSPVS
                     TQLLGEEFVLFRDGAGQLGMVDLHCSHRGTSLEYGRVEERGIRCCYHGWLYDTQGNCL
                     EQPAEPADSTFKDRIKHPAYKVQELGGFIFAYIGPDPAPLLPRYDLLLEENGERVIGA
                     GTEYCNWLQRAENSVDQTHLVALHAPEYPQMALKRPEIAWQQTDYGAKITMHVPGVSK
                     PKHSHWVFPSHTRHTTARKGRIPDHAIRFRVPIDDTKTRTFWLRFTPHTEAERGQPFV
                     QKTIGFEDDKAGAYTRVDDGWWGIASHDQDRVAQETQGPIYQRSKEHLGAADQGVILL
                     RDVIRQSIDAVQQGKDPFWTLRRPEHNQRIAFDASMAE"
BASE COUNT          751 a          946 c          862 g          565 t
ORIGIN      
        1 atcaaagcga ccttcacgcg caccgtcagc gccggctcgt tcatgaccaa aagctttttc
       61 ctgtttccca acatgaacaa ggtcggctat cacctgaacg aagatcatcc cgccgccttc
      121 gccgccaccc acgaaggcta cgaggcgctg cgctggcgcg tgccggtgga cgacaccaac
      181 accatgcact tcacgctcta cttcgcgccg attgtgaatg gcaaagtcac ggcgaaaatc
      241 cccaaggacc aatccgccga agggctgggc gatagcgtgc tcggcaaata ccgttgggac
      301 gaagcgaccg gttggatcgc ccgcggcgat caagaccgct gcgctcaaga aagccagggg
      361 ccgatcttcg accgcagcgg cgagcatctc ggcgtctccg acgaaggcgt gattcaactg
      421 cgccgcatgt tcagggattg catcgaagcg gtgcaaggcg gccaagatcc ggtcggcgtg
      481 gtgcgcgatc cgctaaagaa caaaatgatc accatcgtgc ctggagaaat ccaggtcgca
      541 tgatctattg tttatggaat ggcaaaaatt gtccaagtcg ccataccggc gaacgccggc
      601 actcgaagcg gtggggtatg gcggagaacc tggattccgg cctccgccgg aatgacggag
      661 tcagtgagca accagttcag gcttattatt cgtgactaat ttcgaacgcc gccacaagaa
      721 atcaagtcgg aggaatacat gaaacagttc atcaccagag tttcccggtt aagcttagtg
      781 ctagccgcgt tgacctttgt cagcgaatct tatctagccg cgcaggaaac cttggactcg
      841 ctcatcgccg cggctaagaa ggaagacgag ctcgtgttta tcgccgggac atcgaccttc
      901 ggcggccgca agggtctggc cgatctcgaa gccgcgttca acaaacgctt cggcaccaag
      961 atgaagatca gcttcgccgc cggcccggac atgaacgccc gcgcggcgcg tcatatcacc
     1021 gagatcaagt cggggcgaaa agtttcttcc gatatatttc tcggctccca gtcgcaccaa
     1081 gcgctgatgc acaaagaaaa cgcccttgag aaagtgaatt acgcggggat tttttcttgg
     1141 gtcagcaaag acatggaaat ttttccgggc gaaaccgtgc tcacctacac ctcgcccaac
     1201 ggcatcgtct acaacaaaga cttgattccc aaagacaaag cgccgaaaaa ctatgccgac
     1261 ttgatcgatc cgaaactaag cccggcctgg gccggcaaga tcgccatccc accttatgtc
     1321 gcctggctcg ccgaactttc gctgatttgg ggtacggaga aagtgaagga cttcacgcgc
     1381 aaactcgtcg gaatcagcgc cgggtgcctg cgctacagcg aagaagagcg ggtcgtcagc
     1441 ggcgaatttc cgatcatggc gaactttggc gacgcgttaa gcgccatgtg gacctggcag
     1501 cccaaggggg cgcctctggt cgccgtgccc ggagtcacgc cgatcaacac cgactacttt
     1561 caactgagcg cgccaaagaa cgcgccccat cccaacttgg ccaagctctt cgtcgccttc
     1621 atggcgaccc gagaggccca gacgattctg caaaagtatg aatcgcgcag ctcccatctg
     1681 gtcgagggga cgatcatgca aaagtatctc aaagaaaata aaattgccgt gcaagaaccc
     1741 aagctgtcca tcggctatta tctcaagggc gagacggacg aaggtctaca gttcaaagaa
     1801 gagctggcaa aaatcctcaa aggttcatga cgcggccaga agtcagagat cagaagtcag
     1861 aggtcagagg tcggaaatca aaggtctgat ctcggtgaac gttgaactct tgaaccttga
     1921 atgcacgaaa tcttcgtaac ggcttgaacg gtttgaacga agcgcagcga ttgaacattt
     1981 tgaacgcact cagtcaggag acctgcgatg ttatcgacgg aagaaaacga aaccttgacc
     2041 cgagtcggcc ccgccacccc cgccggcgcc atgctgcggc gctactggtg gccggtggga
     2101 tttaccgagc atgtgcagat caaaggcagc ccggttagta ctcaactcct gggcgaagag
     2161 ttcgtattat ttcgcgacgg cgccggtcaa ctcggcatgg tcgacctgca ctgctcacac
     2221 cgcggcacgt cgttagagta cggccgggtc gaagagcgcg gcatccgctg ctgctaccat
     2281 ggctggctct acgataccca aggtaactgt ctggagcagc cggccgaacc ggccgacagc
     2341 acgttcaaag accggatcaa acatccagcc tacaaagttc aagaactcgg cggcttcatc
     2401 tttgcctaca tcggtcccga tcccgcgccg ctcttgccgc gctacgattt actgcttgaa
     2461 gaaaacggcg agcgtgtcat cggcgccggc acggaatatt gcaactggct gcagcgcgcc
     2521 gaaaactccg ttgaccagac gcacctggtg gcgctgcacg cgcccgagta tccgcagatg
     2581 gcattgaagc ggcccgagat cgcgtggcag caaaccgact atggcgccaa gatcaccatg
     2641 catgtgcctg gggtgtccaa gcccaagcat tcccactggg tttttccctc gcacacgcgc
     2701 cacaccaccg cgcgcaaggg gcgcatcccc gatcatgcga tccgctttcg cgtgcccatc
     2761 gacgacacca agaccaggac tttctggctg cgcttcacgc cccacactga agccgagcgc
     2821 ggccagccct tcgtgcaaaa aaccatcggc ttcgaagacg acaaggccgg cgcttatacc
     2881 agggtcgacg acggctggtg gggtatcgct tcccatgatc aagaccgcgt cgcccaggaa
     2941 acccaaggac cgatctatca acgcagcaaa gaacaccttg gcgccgccga ccagggcgtg
     3001 attctattac gcgacgtgat ccgccaatcg atagacgccg tgcagcaggg caaagacccc
     3061 ttctggacgt tgcgccgtcc cgagcacaac cagcgcatcg ctttcgacgc cagcatggcc
     3121 gaga
//
LOCUS       DATIRS010000310         1502 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1500026, whole genome shotgun sequence.
ACCESSION   DATIRS010000310 DATIRS010000000
VERSION     DATIRS010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1500026"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..564
                     /locus_tag="VLM90_03850"
     CDS             <1..564
                     /locus_tag="VLM90_03850"
                     /inference="COORDINATES: protein motif:HMM:NF017778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine dioxygenase family protein"
                     /protein_id="HSQ12120.1"
                     /translation="NMTYTLQQFIKDLTSITGRYQEQEKIVAVAKPLLAELVKNPDCI
                     EPQFKRHGGTNYGRYMLHRARLFNVTSVVWGPGDGAKAHNHDTWGLVGVVENELQETR
                     FKRCDDGSKAGYAELEPTGVNSNKAGMVSTLIAPDNDIHQMLNTTQKNTVEVHVYGKD
                     LANMQRLQFDIGSRSVKFFASAKYDNC"
     gene            complement(648..>1502)
                     /locus_tag="VLM90_03855"
     CDS             complement(648..>1502)
                     /locus_tag="VLM90_03855"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HSQ12121.1"
                     /translation="GTPACAAQTVAAARQIADDEKLAWTTPEKLSDVTAHAADGVNYI
                     IDVRSEAEFAAGHIDGALNVPGGQAVQRADDFVPVRNGWIVFVSNQSARAVMAAYWYG
                     QMGFKHVSVLQGGLEAWLGSGAKLVTGVTAAEPLGFDSAKRCARIVDATKLRQLRSEG
                     LLILDVSTSLEYESAHLPGAKWICRGWIDVKLPELFPERAQPIVLTCADGRQSIFAAR
                     QLAQLGYSDVQVLDGGVRGWTAAGIDIAEGLDNCLVKTNDVVLSPSIRGSKEDMLNYL
                     NWELKLKH"
BASE COUNT          343 a          467 c          410 g          282 t
ORIGIN      
        1 aacatgacgt acacactgca acaatttatc aaagacttaa ccagcatcac cggccgttac
       61 caagagcagg agaaaatcgt cgccgtggcc aaaccgctgc tcgcggaatt ggtcaaaaat
      121 cctgactgca tcgagccgca gttcaagcgc catggcggca cgaactacgg ccgctacatg
      181 ctgcaccgcg cgcggttgtt caacgtcacc tcggtggtct ggggccccgg cgacggcgcc
      241 aaggcccata atcacgacac ctggggattg gttggggtgg tcgagaatga attgcaggaa
      301 acccgcttca aacgctgcga cgacggcagc aaagcaggct acgccgaatt agagccgacc
      361 ggagtcaata gcaacaaggc gggaatggtt tcgactctga tcgcgccgga caacgacatt
      421 caccagatgc tcaataccac gcaaaaaaat actgtggaag ttcatgtcta cggaaaagac
      481 ttggccaaca tgcagcgttt gcaattcgac attggcagtc gctcggtcaa atttttcgcc
      541 agcgccaagt acgataactg ttgagagagg gcaagggcga ccgccggtcg cccctacaag
      601 aaaactgtag gatgggtgga gcgcagcgat acccatcgtc cttgcggcta gtgtttgagc
      661 ttcagctccc aattcaaata attcagcata tcttccttgc tgcctcggat ggacggcgac
      721 aacacgacgt cattggtttt gactaagcag ttatccagcc cctcggcgat gtcgattccg
      781 gcagccgtcc aaccgcgcac accaccgtcg agcacctgga catcgctgta accaagttgt
      841 gcaagctggc gcgccgcgaa aattgattgc cgcccgtcgg cgcaggtaag aacaatcggc
      901 tgcgcgcgct cggggaacag ctccggcagc ttgacgtcaa tccagccacg gcaaatccac
      961 ttggctcccg ggaggtgcgc gctttcatat tccaagctgg tgctgacatc gaggatcaac
     1021 aatccttcgc tgcgcagctg ccgcagcttg gtcgcatcga caatacgcgc acaccgcttt
     1081 gccgagtcga agcccaacgg ctcagctgcg gtcacgccgg taacaagctt tgcgccgctc
     1141 cccagccacg cttccagccc tccctgcagc acgctgacat gcttgaatcc catttgcccg
     1201 taccagtatg ccgccatcac ggcgcgcgcc gattgattac tgacaaaaac gatccagcca
     1261 ttgcgcaccg ggacaaaatc atcggcgcgc tgcaccgcct gcccgccggg cacattgagc
     1321 gcgccgtcga tatgaccagc ggcgaactcg gcctcggagc gaacatcgat aatgtaattg
     1381 acgccatcgg cggcatgagc agtgacatcg ctgagttttt ccggcgtggt ccaggcgagc
     1441 ttttcatcgt cggcgatttg ccgtgcggcc gccaccgttt gcgccgcgca tgccggcgtc
     1501 cc
//
LOCUS       DATIRS010000311         2297 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1205119, whole genome shotgun sequence.
ACCESSION   DATIRS010000311 DATIRS010000000
VERSION     DATIRS010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2297
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1205119"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(99..>2297)
                     /locus_tag="VLM90_03860"
     CDS             complement(99..>2297)
                     /locus_tag="VLM90_03860"
                     /inference="COORDINATES: protein motif:HMM:NF024579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12122.1"
                     /translation="THSLSRWLEAFPAVALATANYRAMDVPGRRASTLAVLVRLLLRA
                     SSLKPLLLVFEDLHWIDSETQAFLDALVDSLPVGRICLLVNYRPGYSHAWANKEHYSR
                     LRLNPLTAAGAEELLDALMGDHGDLATVKQLLISRADGNPFFVEESVRSLTASGVLVG
                     SKGNYRPGVQVENIRIPNTVQTVLAERVDRLPALEKQLLQTASVIGMIVPERLLHGVT
                     GLPEAELRGALSHLQTGEFLYESNLYPKLEYKFTHALINEVVYGALLHERKTALHAQT
                     VAAIERLSGGNPLDEIEALADHAFRGELWEKAADYMSQAGGKAMSHSAFGEALDSYTR
                     AFEALGHLPETAARLEQRIDLHLDCRNVLFLRGDLPRVGDHLAQAEALAERIGDSRRL
                     ARVLNFQNSYYGLVGDPERAIEAGQRALAMPATQQDTALRAVTSYYTGVAYNKIAQYE
                     RAATVLRSGMQSVEGALRHQRFGTTVILSVIFRSHLLQSLAMTGDFAEGLARGAEGVQ
                     IADEANHPVSQIHVNASLGFLYLFKGDFHEAIPVLERAMTLCEENLIAIYVPLVAPRL
                     GYAYVRAGRQAEGLRLLEQSIEDSAAVGRAGFLALNLAWLSDAYLSANRVDEAMVLAD
                     RACDLSRQHKEPGHGALALKLRGDIAMRLTLRQIEQAEGHYREALTLASDMAMRPLQA
                     HCHAALAQVYGVAGNLEQARQESSAARELFAALAMNGFLTMVESDSTRFI"
BASE COUNT          469 a          729 c          660 g          439 t
ORIGIN      
        1 tggaaaattc tcagatgatc gtttgcgctg tgatttggcc agccgtcgag tcatgatcgc
       61 taaaaaaatc ttgcgggaat tctttacggc ggcgacggct aaataaaccg agttgaatca
      121 ctttcgacca tcgtcaggaa gccattcatc gccagagcgg cgaaaagttc ccgcgcggcg
      181 ctcgactctt ggcgcgcctg ctcaaggttt cccgccaccc cgtagacttg ggcaagcgcc
      241 gcatgacaat gggcctggag aggccgcatc gccatatcgc tggcgagagt caacgcttcg
      301 cgatagtgcc cctcggcctg ctcgatttgt ctaagggtta ggcgcatggc gatatcgccg
      361 cgcagcttga gcgccaatgc gccatgaccc ggctctttgt gttgtctgga taaatcacag
      421 gcgcgatccg ccaagaccat cgcttcgtcg acgcgattgg cgctcaagta ggcgtcgctc
      481 agccaagcga gattaagcgc caagaaccca gcccggccga ccgcggcgga atcttcgatg
      541 ctttgctcga gtagccgcaa cccttcggcc tgacggccgg cacggacata agcgtaaccc
      601 agccgcggcg caaccagggg cacataaatc gcgataagat tctcctcgca cagagtcata
      661 gcccgctcca agaccggtat cgcttcgtga aagtcaccct tgaacagata cagaaagccg
      721 agactggcat tgacgtgaat ctggctaacc ggatgattcg cctcatcggc gatctgcacg
      781 ccctcggcgc cgcgcgccag cccttcggca aaatcccctg tcatcgctag ggattgcaac
      841 aagtggctgc gaaagatcac cgaaagaatc accgtggtgc cgaaacgttg gtggcgcaaa
      901 gccccctcga cgctttgcat gccgctgcgc agcaccgtcg ccgcgcgctc atactgggcg
      961 atcttgttgt acgccacgcc ggtgtagtaa ctggtcaccg cccgcagcgc ggtatcctgc
     1021 tgcgtcgccg gcatcgccaa ggcgcgctgg ccggcttcga tggcccgctc gggatcgccg
     1081 accaagccgt aataactatt ttgaaaattg agcacccgcg ccaagcgccg gctgtcgccg
     1141 atccgttcgg cgagcgcctc ggcttgcgcc agatggtcgc cgacccgcgg caaatcgccg
     1201 cgcaagaaca gcacgttgcg acagtccagg tgcagatcga tgcgctgctc aagccgcgcc
     1261 gcggtttccg gcagatggcc gagcgcttcg aaggcgcggg tatagctgtc caacgcctcg
     1321 ccgaaagccg aatggctcat cgccttgccg cccgcttggc tcatatagtc ggcggctttt
     1381 tcccacaact cgccgcgaaa cgcgtggtcc gcgagcgctt cgatttcgtc gagcggattg
     1441 ccgccgctta gccgctcgat cgccgccaca gtctgcgcat gcaaggcggt cttgcgctcg
     1501 tgcaacaacg cgccgtagac cacttcgttg atcaacgcat gggtgaactt atattccaac
     1561 ttgggataca agttgctttc gtaaagaaac tcaccggttt gtaaatggct cagggcgccg
     1621 cgcagttctg cttccggcaa tcccgtgacg ccatggagca gccgctcggg aacgatcatg
     1681 ccgatgaccg aggcggtttg cagcagctgt ttctccagcg ccggcaagcg atcgacgcgc
     1741 tccgcgagaa ctgtctgcac ggtgttggga atgcgaatgt tctcgacttg tacccccggc
     1801 cgatagtttc ccttggagcc aaccagaact cccgaagcgg tcagcgagcg cacactttct
     1861 tcgacgaaga acggattgcc atccgcccgg ctaatcagca gctgtttgac cgtcgccaga
     1921 tcgccatgat cgcccatcag cgcgtcgagc aactcttcag cgcccgccgc cgtcaatggg
     1981 ttgagtcgca aacggctgta gtgctcttta ttggcccatg cgtggctgta gcccggccgg
     2041 tagttgacca acaagcagat ccgcccgacc ggtagactat cgactaaagc gtcgagaaac
     2101 gcttgggtct cgctgtcgat ccagtgcaga tcttcgaaga ccagaagcag cggtttcaag
     2161 ctgctcgctc gcaagagcaa acgcactaaa accgccagag tcgatgcgcg ccgtcccggc
     2221 acatccatgg cacggtaatt cgccgttgcg agcgcgacag cggggaacgc ttcgagccac
     2281 cgcgacagcg aatgggt
//
LOCUS       DATIRS010000312         2805 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_221798, whole genome shotgun sequence.
ACCESSION   DATIRS010000312 DATIRS010000000
VERSION     DATIRS010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2805
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_221798"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(324..1106)
                     /locus_tag="VLM90_03865"
     CDS             complement(324..1106)
                     /locus_tag="VLM90_03865"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HSQ12123.1"
                     /translation="MSADTTAGYDLLYDIIRRRSSVRKLKPDPIPDEYIGKILEAGRW
                     AMSGANSQPWEYIVVKDAKVKKDLFRCYSEDNTDFIYWMEQQRVFELRHPAYQMTADA
                     AVERQRRGAGWSEAPALIVVVGDGRRQWGTVQGAHTFGRDQSHLTDGLANTCTFMHLA
                     AVSLGLATQWVSIHLQEPFKKVLGVPDLMMLYLIIPIGYPAVEPSEGVRRPLDEIVHH
                     DHYEQEKFMSNERVIQFLYELRGKTLQTYRQSYVGKDEPEKK"
     gene            complement(1321..2694)
                     /locus_tag="VLM90_03870"
     CDS             complement(1321..2694)
                     /locus_tag="VLM90_03870"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HSQ12124.1"
                     /translation="MLEQTLSEQLSREIAQLQFDRIPAHVIDAAKLHILDSLGCILAG
                     TRLEPGRLAYNLAVEASVGNANSTLFGTARRAGYLDAVQAMATAAHCGELDDIHGGAA
                     TCIGAMIVPALLALAERHGASGRRFLEAAIAGYETTARIGLSIDAPKLFDRGWWPSTV
                     CGAFGVAAAGAKFLGWPVDKTINAFGIASLHTGGMLTGGQEGATARHLAFGSAARNGL
                     LALLATEQGLTGPKRALEDPRGFCFTLCAEPKLEFLQDFKQFHLLDVAFKPYPCARQL
                     HAGVEALLKLTSEYSIGAEAIRAIELAVPTQNAGMVDRPATPTLRAATLGSGQYVMAV
                     TAFRGKIDLASFEDEFLQSEPVRQLMTKVTVSASTELDRHFPKYWAGRVTVTLADGQV
                     HTQEIIAPKGEIENPLTPQDVEAKFLGLAGPVLGEGKARAVIDEVSLLDTRDSMAPLL
                     AALKLSE"
BASE COUNT          584 a          860 c          795 g          566 t
ORIGIN      
        1 aaagttcatg agcaatgagc gggtgattca gttcctctac gagctgcgcg gtaagacgct
       61 gcaaacctat cggcagtcgt atgtcggcaa ggatgagccg gagaagaagt gagggaagta
      121 aggcgtgaag ggtaaggggt aaggcgaggg agaatttcgc agtctcattt gcgtggccgc
      181 ttttcgattg ccggaaagag aatccagtaa tcttatccga cgtcttttgt tcatactcta
      241 ttctccaatc caaaagcggc cacgcaaacg agactgagaa attctccttc gccttacccc
      301 ttacccttca cgccttactt ccctcacttc ttctccggct catccttccc aacatacgac
      361 tgccgatagg tttgcagcgt cttaccgcgc agctcgtaga ggaactgaat cacccgctca
      421 ttgctcatga acttttcctg ctcgtaatga tcgtgatgga cgatctcgtc cagcggccgg
      481 cgcacgcctt cggacggctc caccgcaggg tagccgatgg ggatgatcag gtagagcatc
      541 atcagatcgg gcacaccgag aaccttcttg aacggttcct gaagatgaat cgacacccac
      601 tgggtcgcga ggccgaggga aacggcggcg agatgcatga acgtgcaggt attcgccagg
      661 ccgtcggtga gatgggattg atcacggccg aacgtatgcg ccccttgcac cgtgccccac
      721 tggcgccggc cgtcgccgac cacgacgatc aacgccggcg cttccgacca accggcgccg
      781 cgccgctgcc gctcaacggc ggcgtcggcg gtcatttgat aggccggatg gcgcagctcg
      841 aaaacgcgct gctgctccat ccagtaaata aagtcggtat tgtcctccga ataacaacgg
      901 aagagatcct ttttcacttt ggcatctttg acgacgatat actcccaggg ctgcgagttg
      961 gctcccgaca tcgcccagcg cccggcttcg agtatcttgc cgatatattc gtcgggaatc
     1021 ggatcgggct tcaacttgcg cacgctcgag cggcgccgga tgatgtcata gagtagatcg
     1081 taacctgcgg tggtgtctgc actcataggg gaacctccaa agtgtatgga caagtgattt
     1141 gaaactcagt tcttatagcc gacaacaccg tgccgcttca atcgtcgtcg cgtcttatac
     1201 cctcgccctt tgggagaggg aagggtgagg gctctttcaa gggcgcagtc caagccggtc
     1261 gtccatcgga gccctcatcc tagccttctc cctgagggcg aaggaacctg atccgcaacg
     1321 ctactctgat aacttgagcg ccgccagcag cggagccatc gaatcccgcg tatccaacaa
     1381 gctaacttca tcaatcaccg cccgcgcttt cccctcgccc agtaccggcc cggccaagcc
     1441 gagaaacttc gcttcgacat cttggggcgt cagcggattc tcaatctcgc ccttgggcgc
     1501 gataatctct tgcgtatgta cctgaccgtc cgcaagcgtc accgtcactc gtcccgccca
     1561 atatttcggg aaatgccgat cgagctccgt gctcgcgctg acagtcactt tagtcatcaa
     1621 ctggcgaact ggctcactct gcaggaactc gtcctcgaat gacgccaaat cgatttttcc
     1681 tctgaacgcc gtcacagcca tcacatattg cccacttccc aacgtcgccg cgcgcagcgt
     1741 cggcgtcgcc gggcgatcga ccataccggc gttttgcgtc ggcaccgcca gttcgatcgc
     1801 gcgaatcgct tccgcgccaa tagaatattc gcttgtcagt ttcagcagcg cttcaacccc
     1861 ggcatgcagc tggcgtgcgc aggggtaagg cttaaacgcg acatcgagca aatgaaactg
     1921 tttgaagtct tggagaaact ctaacttcgg ttcggcacaa agcgtgaaac aaaagccgcg
     1981 cggatcttcc agcgcgcgct tcggccccgt aagcccctgc tcggtggcga gcagtgcgag
     2041 caggccattg cgcgccgcag aaccgaaagc cagatgacgc gccgtcgcgc cttcctgtcc
     2101 gccggtgagc atgccgccgg tgtgaagcga agcgatgccg aaggcgttga tcgtcttgtc
     2161 gaccggccag cctaagaact tcgctcccgc cgctgccaca ccgaaggcgc cgcaaaccgt
     2221 actcggccac cagccgcggt cgaaaagctt cggcgcatcg atgctcaagc cgatgcgagc
     2281 ggtagtttcg tagccggcga ttgccgcttc gagaaaacgc cggccgctgg cgccatgtct
     2341 ttccgccagc gcaaggagcg cgggaacgat catagcgccg atgcaagtcg ccgcgccgcc
     2401 gtgaatgtcg tcgagctcgc cgcagtgcgc cgctgtcgcc atagcctgca cggcgtcgag
     2461 atagccggcg cgtcgagccg ttccaaagag cgtcgaattg gcattgccaa cgctcgcctc
     2521 cactgccaga ttgtacgcca gccgtcccgg ctccaggcgc gtaccggcaa gaatacaacc
     2581 gagggaatcg aggatgtgga gtttggcggc gtcgataacg tgagcgggga ttcgatcaaa
     2641 ttggagttga gcgatctcgc gtgaaagctg ttcgctgagg gtttgttcca gcatgatcgg
     2701 agtgaaccgt taggtgttct cgatttattg taggggcaac cccccgtggt tgccctccgc
     2761 cgggcaggca cgggggcctg cccctacagg gaagacaaaa caagg
//
LOCUS       DATIRS010000313         1921 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1402085, whole genome shotgun sequence.
ACCESSION   DATIRS010000313 DATIRS010000000
VERSION     DATIRS010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1921
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1402085"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..759
                     /locus_tag="VLM90_03875"
     CDS             <1..759
                     /locus_tag="VLM90_03875"
                     /inference="COORDINATES: protein motif:HMM:NF024739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ12125.1"
                     /translation="VVDGSSTTTMVRRAGLLQRFYSPHLAEYPAELKDAEGFWGVSNL
                     YFHTIGYNTRMVKPGEVPKSYEDLLHPRWKGQMIWSTGRGGGGPLFVGNVLQNMGESA
                     GKAYLQKLRGQNIAKSTASSRQVLDMVIAGEQPIVLVIFNHHAYISKTAGAPSEWQPL
                     EPVPARVSTIGLPKFAPHPHAAMLFMDFVLSKRGQKVMQQSNYLPSHPEMPALQADLK
                     PGGGRFKRVHYMNPEQEYDRGNDWVDYFQKNFIQ"
     gene            871..>1921
                     /locus_tag="VLM90_03880"
     CDS             871..>1921
                     /locus_tag="VLM90_03880"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ12126.1"
                     /translation="MIPAIRGSRWSLAFLAVFAVAGLARAATVEEIALMNRADRQKIL
                     VEGARKEGKVTWYTTLIVDQVVRPVKDAFEKEYPFIQVEFFRGNTERIVQRMIAEYQA
                     KRYEADLIDGTVSPTMVRRAGLLQRFNSPMFADYPAELKDAQGFWGATNLYFFATGYN
                     TRMVKANEVPKSYEDLLHPRWKGQMMWSTSRGSGAPMFVGTILSTMGNEAGKAYLQKL
                     KLQNVAKTSASNRQVLDLTIAGEYPLALQIFNHHAFISKAVGAPVEWIVHEPATATIN
                     NIGLGKFASHPHAAMLLIDFILSEKGQRVYQQSNYLPAHPKVPAKQVDLKPGGGRFKR
                     AFYINPDQQYDKGNDW"
BASE COUNT          431 a          539 c          566 g          385 t
ORIGIN      
        1 gtcgtcgacg gcagctcgac gacgaccatg gtccggcgcg ccggtcttct gcaacgattt
       61 tattcgccgc atttggcgga gtatccggcc gagctcaaag atgccgaagg gttctggggc
      121 gtgagcaacc tttactttca caccatcggc tacaacacgc gcatggtcaa acctggcgag
      181 gtgccaaaga gctatgaaga tttgctgcat ccgcgctgga aaggccagat gatctggtcc
      241 actgggcgcg gcggcggcgg gccgttgttc gtcggcaatg tgttgcaaaa catgggcgag
      301 agcgccggca aggcttactt gcagaaactg cgcggacaaa acatcgccaa gagcaccgcc
      361 agctcgcgcc aagtgctcga catggtgatc gccggcgaac agccgattgt cctggtgatc
      421 ttcaatcatc atgcctatat cagcaagact gccggcgcgc cgtccgagtg gcagccgttg
      481 gagccggtgc cggcgcgggt cagcaccatc ggcttgccca agttcgcgcc ccatccccat
      541 gcggcgatgt tgttcatgga ttttgtcctt tccaagcgcg gccagaaggt catgcaacag
      601 tccaactatt tgccgtccca tccagaaatg ccggcgctgc aagccgatct caagcccggc
      661 ggcggccgct tcaagcgggt tcattacatg aatccggaac aggagtacga ccggggcaac
      721 gattgggtcg attatttcca gaaaaatttc atccaataag cccggccatt gcagcatttt
      781 cccgaggccg attaccttga caagcgaagg tcagtcagac tagcttcgca accatatggc
      841 tcggtttgct taccgcctgg aggtgccgcg atgataccgg cgattagagg ctcaagatgg
      901 tcgctggcgt tcctcgccgt ctttgctgtg gccggcttag cacgggccgc aacggtggaa
      961 gagatcgctc tgatgaaccg cgccgaccgg caaaaaatcc tcgtcgaggg cgccaggaaa
     1021 gaaggcaagg tcacttggta cactaccttg atcgtcgatc aggtggtgcg gccggtgaaa
     1081 gatgcatttg aaaaggaata tccatttatc caggtagagt tttttcgcgg caacaccgag
     1141 cgcatcgtcc agaggatgat cgccgaatat caagccaagc gttacgaagc ggatttgatc
     1201 gacggcacgg tgtcgccgac catggtgcgg cgggccggat tgttgcaacg atttaattca
     1261 ccgatgtttg ccgactaccc cgccgaactc aaggatgctc aaggcttttg gggcgcgacc
     1321 aatctgtatt tcttcgccac cggttataac acgcgcatgg tcaaggccaa cgaggtgccg
     1381 aagagctacg aggacctgct ccatccgcgc tggaaggggc agatgatgtg gtccaccagc
     1441 cgcggctccg gcgcgccgat gtttgtcggc acgatcctca gcaccatggg taacgaggcg
     1501 ggcaaagcat acctgcaaaa actcaagctg caaaatgtcg ccaagacctc ggcgagtaac
     1561 cggcaagtgc tcgatttgac cattgccggc gaatatccgc tggcgctgca gattttcaat
     1621 catcacgcgt ttatcagcaa agcggtgggc gcgccggtgg agtggatcgt ccacgagccg
     1681 gcgacggcga cgatcaataa tatcggtctg gggaaatttg ccagccaccc gcatgcggcg
     1741 atgttgttga tcgatttcat tctgtcggaa aaaggtcaga gggtttatca gcagtcgaac
     1801 tacttgccgg ctcatcccaa agtgccggcc aaacaggtcg atctcaaacc gggcggcggg
     1861 cggttcaaac gggcgtttta catcaatccc gatcaacagt acgacaaagg caacgactgg
     1921 g
//
LOCUS       DATIRS010000314         1745 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_123295, whole genome shotgun sequence.
ACCESSION   DATIRS010000314 DATIRS010000000
VERSION     DATIRS010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1745
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123295"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..257
                     /locus_tag="VLM90_03885"
     CDS             <1..257
                     /locus_tag="VLM90_03885"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HSQ12127.1"
                     /translation="NDAVKDIKCPSQIFLGGNDHVASIPVQQKLMASFQANGQPLDWH
                     FFHRAGHGFAMADGDCYDPALAEQAWGLMASFLGRELAIS"
     gene            complement(271..741)
                     /locus_tag="VLM90_03890"
     CDS             complement(271..741)
                     /locus_tag="VLM90_03890"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSQ12128.1"
                     /translation="MEIPIRKAVLDDAPEIAKLLQGIGWFEAFSSREFKDSVTRVEGR
                     LRQCLADDSHSIYVAESPHGEIAGYGSVHWLPYLFMAGPEGYVSELFVRDDERGQGVG
                     RQLLRIIEVEARARGCQRLSLINLRNRESYQRRFYLKAGWSERSEAANFVYTIS"
     gene            complement(826..>1745)
                     /locus_tag="VLM90_03895"
     CDS             complement(826..>1745)
                     /locus_tag="VLM90_03895"
                     /inference="COORDINATES: protein motif:HMM:NF015451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aminoacetone oxidase family FAD-binding enzyme"
                     /protein_id="HSQ12129.1"
                     /translation="RHGIAYHEKELGQLFCDQSARQIVKLLTDECSQAGVRIATDCTV
                     NGVERGAAGFVIKSNRGSFEALSLVVACGGLSVPKMGASGFGYELAKRFGHRIVPTRA
                     GLVPLVFSADDLVRYKDLSGVALPVQVECRRQSFANALLFTHRGISGPAILQISSYWQ
                     PGDDLTINLLPLTDADAWLKRRQTARPDAELKTVLGEFLPKRLAQRLCEIELGSRPLR
                     QYSQRDMRAICERLQSWRFRPSETEGYRTAEVTLGGVDTDELSSTTMESKIVAGLYFI
                     GEVVDVTGHLGGFNFQWAWSSGHAAGQVV"
BASE COUNT          382 a          540 c          475 g          348 t
ORIGIN      
        1 ccaacgacgc agtcaaagac atcaaatgcc cgtcgcagat ttttcttggg ggtaatgatc
       61 atgtcgctag cattccggtg caacaaaaat tgatggcgag ctttcaagcc aacggccaac
      121 cgctcgactg gcacttcttc caccgtgccg gtcacggttt cgccatggcc gacggcgact
      181 gctacgatcc ggcattagcc gaacaagcgt ggggcctgat ggcgagtttc ctcggaagag
      241 aattggcaat cagctaacga agcgcgtagc ttaggaaatc gtatatacga agttcgccgc
      301 ttcactgcgt tcgctccagc cggctttaag ataaaaccgc cgctggtagg attcgcggtt
      361 gcgcaggtta atcagggata gccgttgaca gccgcgcgcc cgcgcttcga cctcgatgat
      421 tctgagcagt tggcggccca ccccttgtcc gcgctcgtca tcccgaacga ataattcaga
      481 aacataaccc tctggccccg ccatgaaaag atacggcagc cagtgcaccg aaccatagcc
      541 agcgatctcg ccatggggcg attcggcgac gtagatggag tgactatcgt cggcgagaca
      601 ttgccgaagc cggccttcaa ctcgcgtgac cgagtccttg aactcccggc tgctgaacgc
      661 ctcgaaccat cctatgcctt gcagcaattt tgcgatctcg ggtgcatcgt ctaaaacggc
      721 ctttctgatc ggtatctcca tggactcctc cgttctgatg aatcgttaca tacgctcatc
      781 gtgactgtgc agctagcgcg cttaaagcga ttttgccggt gcaatctaca ccacttgacc
      841 ggccgcatga cccgacgacc aggcccactg gaaattgaat ccgccgagat ggccggtgac
      901 atcgacgact tcgccgatga aatataggcc ggcaacgatc ttcgactcca tcgtagtcga
      961 tgagagctcg tcggtgtcga cgccgccgag ggtaacctcc gcggtccgat agccttcggt
     1021 ttcgctcggc cgaaagcgcc aactttgcag ccgctcgcag atcgcccgca tgtctcgctg
     1081 ggaatattga cgcagcggcc ggctgccgag ttcgatctca cacaaccgtt gcgccaagcg
     1141 tttcggcagg aattcgccaa gcacggtttt caattccgcg tcgggacgcg cggtctgtcg
     1201 ccgtttcaac caagcgtcgg catcggtcaa cggcagcaaa ttaatcgtca ggtcatcgcc
     1261 cggctgccaa taagaggaga tttgcaaaat cgccggaccg ctgatgccgc gatgggtgaa
     1321 caacaacgcg ttggcaaaac tttgccggcg acattcgact tgcacaggca gggcgacacc
     1381 ggacagatct ttataacgca ccaggtcgtc cgcgctgaaa accaagggca ccagaccggc
     1441 gcgagtcggc acgatgcggt ggccgaatcg cttggcgagt tcgtagccaa atccgctggc
     1501 gcccattttc ggcaccgaca ggccgccaca agcaaccacc aaagacaacg cttcgaatga
     1561 gccacgattg ctcttgatga caaaccccgc ggcgccgcgc tccacgccgt tcacagtgca
     1621 atcggtcgca atccgtacgc ccgcctgact gcattcgtcg gtcagcagct tgacgatctg
     1681 gcgcgccgat tgatcgcaga acagctggcc cagctccttc tcgtgatagg cgatgccatg
     1741 acgct
//
LOCUS       DATIRS010000315         1952 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1795380, whole genome shotgun sequence.
ACCESSION   DATIRS010000315 DATIRS010000000
VERSION     DATIRS010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1952)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1952)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1952
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1795380"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            167..1099
                     /locus_tag="VLM90_03900"
     CDS             167..1099
                     /locus_tag="VLM90_03900"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF013323.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HSQ12130.1"
                     /translation="MNKPQKADKLTTMREAIAAYVDDGCSLAIEGFTGFISFAAGHEI
                     IRQKRQGLTLIRMTPDLIYDQMIAAGTAKKLIFSYTGNPGVGSLYCVRRAVEKSIPGP
                     LEWEEYSHYGLVGRYAAGASRAPFFPLRSYIGSEMLEVNPLIKLIDDPYGTGKIAVVP
                     PLNPDVAILHAQRADRRGNTQLWGLLGMQKEVAFAAKHVIIVVEEIVDESVIRADPNR
                     TLIPGLIVDAVVHEPYGAHPSYVQGYYDRDNETYLTWDKLSQDHGAVLAWLDEWVYGL
                     ENHAAYVRKLGQAYFDRLKPEPLPAPSVDYGRYR"
     gene            1096..1863
                     /locus_tag="VLM90_03905"
     CDS             1096..1863
                     /locus_tag="VLM90_03905"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF013323.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HSQ12131.1"
                     /translation="MSEVSYTDSEMMIAVAARMLKGARTVFVGVGLPNVACNLARYTV
                     APDLELIYESGVYGARPERLPLSIGDPTLVSGATSVVSMADLFGLYLQGGLVEIALLG
                     GAQIDRYGNLNSTVIGDYSKPKTRLPGSGGALEIATNAQRTFMIMRLKRRAFVGKLDF
                     LTSPGHLTGGDSRARLGLPGGGPEIVITDKAVLNFANPEREMQLNALYPGVTAEDVQA
                     EVGWPLRLAETIEEITAPTSEELHLIRDEVDPDAMYR"
BASE COUNT          407 a          564 c          593 g          388 t
ORIGIN      
        1 gatcgactgg caggcgttgg cgaaaccgga taactatctc ggcgagaccg acaatattat
       61 cgaccgagtg ctcaaaggtt caactaaaaa aggcgggcgg gttttctaac ccgccgaaag
      121 aaggcggaca ctgatgtccg ccctgcgaaa tttcaaccga gacgctatga acaaacctca
      181 aaaagccgat aagctcacta ccatgcgcga agccatcgcc gcctatgtcg acgacggctg
      241 ctcgctggcg atcgaaggat tcaccggatt catttcattc gccgcgggcc acgagatcat
      301 ccgccagaag cgccagggtc tcactttgat ccgcatgact ccagacctga tctacgatca
      361 gatgatcgcc gcgggcaccg cgaagaaatt aatcttcagc tacacgggca accccggtgt
      421 cggctcgctt tactgcgtcc gccgcgcggt ggaaaaatcc attcctggcc cgctggaatg
      481 ggaggagtat tcgcactacg ggttggtggg gcgatatgcg gcaggggcgt cgcgggcgcc
      541 gttttttccg ctgcgcagtt atatcggctc ggaaatgctg gaggtcaatc cgctgatcaa
      601 attgatcgac gatccctacg gcacgggcaa gatcgcggtg gtgccgccgc tcaatcccga
      661 cgtggcgatt ctccacgctc agcgcgcgga ccggcgcggc aacacgcaac tgtggggcct
      721 gctgggcatg caaaaagaag tggcgtttgc cgccaagcat gtgatcatcg tggtcgaaga
      781 aatcgtcgat gaatcggtga ttcgcgccga tcccaaccgc actttgattc ccggcctgat
      841 cgtcgatgcg gtggtgcacg agccctacgg cgcacatcca tcctacgtcc agggttatta
      901 cgaccgggac aacgaaactt atcttacctg ggacaagctt tctcaggatc acggtgcggt
      961 cctggcgtgg ctcgacgaat gggtttacgg cttggaaaat cacgccgcgt acgtgcggaa
     1021 attgggtcaa gcctatttcg acaggctcaa gccggagcca ttgccggcgc cctcggtgga
     1081 ctacgggagg tatcgatgag cgaagtttct tacaccgatt ccgagatgat gatcgcggtg
     1141 gcggcgcgca tgttgaaagg agcgcgcacg gttttcgtcg gcgtcggtct gccgaatgtt
     1201 gcctgcaacc tcgcgcgcta cacggtcgcg cctgacttgg agttgattta cgaatccggt
     1261 gtctacggcg cccgtccgga gcggctgccg ctttcgatcg gcgatcccac cttggtgagc
     1321 ggagcgacct cggtggtctc catggcggat ctgtttggct tgtacttgca aggggggctg
     1381 gtcgagatcg cgctcctcgg cggcgcccag atcgaccgct acggcaatct caactccacg
     1441 gtcatcggcg actattccaa accgaagacg cgactgccgg gaagcggcgg cgcgttagaa
     1501 atcgccacca acgcgcaacg cacgttcatg atcatgcgtc ttaagcgtcg tgcgtttgtc
     1561 ggcaagctcg attttctcac cagcccaggc cacttgaccg gtggtgacag ccgcgctcgg
     1621 ttgggcttgc ccggcggcgg gccggaaatc gtgattaccg acaaagctgt cttgaatttc
     1681 gctaacccgg agcgggaaat gcagcttaac gccctctatc caggcgtgac ggcagaagac
     1741 gtgcaggccg aggtcggctg gccgctgcgt ttagccgaga cgatcgaaga aatcaccgcg
     1801 ccgacgagtg aagagctgca tctgatccgc gacgaagtcg accccgacgc tatgtaccgt
     1861 tgaaaacgaa aaccgccact ggagcatttt gctgatttca cgatctgcgg cgcggcgcgg
     1921 cgatgagaat agttcctcgg aggaagtgga tc
//
LOCUS       DATIRS010000316         2049 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1107296, whole genome shotgun sequence.
ACCESSION   DATIRS010000316 DATIRS010000000
VERSION     DATIRS010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2049
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1107296"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..697
                     /locus_tag="VLM90_03910"
     CDS             <1..697
                     /locus_tag="VLM90_03910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12132.1"
                     /translation="LVKFIFYDYSLLPNGEANRYVDWAHARGIKVKIHSGGVSRSGVS
                     QVAGFDMVQRIKPDIIGHITGGPIPMPEADMLRIANETECFMEICTSGNYRLALSLAR
                     AVTANGRYDRVLIGTDTPGGTGIVPRGILREIAFISSVGEIPPEKTICMATGNVGRAH
                     GLNLGILEEERPADIVLMHKITGSVSTDALDSFAKGDLPGISYVIIDGVVQVAGRSQQ
                     TPPPEVLANQSCC"
     gene            710..1690
                     /locus_tag="VLM90_03915"
     CDS             710..1690
                     /locus_tag="VLM90_03915"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ12133.1"
                     /translation="MSACEFGVGLFPTEPLEKMIHLAKVSEEVGFSHIWVGDSHLIWR
                     EAYINMAAMALNTTKVKLGTGVTNPLTRHPSVLASGYATLEEYSPGRMIVGIGLGDSS
                     VETMGMKPSTLANFEKSLEQMRQILDGKEAQLPTGKIHLLHPTKTRVPIYIAASGPKM
                     LELSGRIADGIIVLVGVADDYIADAKEKIAAGAKVAGRKLADINLVLWVPCAVSETAN
                     AKDAVKAHVARVVAHPLPYVLDHNEQKILQEIRKTYDYYHHMDQQANHADVIPDWLVD
                     KFAIAGTVAQCKAQIERIKKTGVQQIAIIPYSPPGGSREETIRGFAKAMS"
     gene            complement(1759..>2049)
                     /locus_tag="VLM90_03920"
     CDS             complement(1759..>2049)
                     /locus_tag="VLM90_03920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12134.1"
                     /translation="ISTFMVKFSRISFDGHYRSKFVVKLPESQPFGTAQRWAKIYDLS
                     LTADRLGILDRHYGNLKAATHVPEENVDIQRITRLPGTSAVRKCALNNKLVS"
BASE COUNT          472 a          579 c          575 g          423 t
ORIGIN      
        1 gctggtcaaa ttcattttct acgactacag cctgttgccc aacggcgaag ccaaccgcta
       61 cgtcgactgg gcgcacgccc gcggcatcaa agttaaaatt cattccggcg gcgtgtcgcg
      121 ttccggtgtg agccaggtgg ccggcttcga catggtgcag aggatcaaac cggacatcat
      181 cggccatatc accggcgggc cgatccctat gcctgaagcg gacatgctgc gcatcgccaa
      241 cgaaaccgaa tgcttcatgg aaatttgtac ttcaggaaat taccggctgg cgctgagtct
      301 agcacgcgcg gtcacagcca acggccgtta cgaccgggtg ctgatcggca ccgacactcc
      361 cggcggcacc gggattgtgc cgcgcggtat tctgcgcgag atcgctttca tctcttcggt
      421 cggtgaaatt ccgccggaga aaaccatctg catggccacc ggtaatgtcg gccgcgccca
      481 tggcttgaat ctcggcattc tcgaagagga gcggcccgcc gacatcgttt tgatgcacaa
      541 gatcaccggg tcggtgtcga cggatgcgct ggactcattc gccaagggcg atctgccggg
      601 gatttcctat gtgatcatcg acggcgtcgt tcaagtagcc ggccgcagcc agcagacgcc
      661 gccgcccgaa gtgctggcca accagtcttg ttgttagagg agagtgatcg tgagcgcttg
      721 tgaatttggc gtggggttat ttcccaccga accattagag aaaatgattc atctggccaa
      781 ggtgagcgaa gaggttggct ttagccatat ctgggtcggc gattcgcatt taatttggcg
      841 cgaagcctac atcaacatgg cggcgatggc gctcaacacg acgaaggtca agctgggcac
      901 cggcgtcacc aacccgctga cgcgccatcc gtcagtgctg gccagtggct acgcgaccct
      961 ggaagaatat tcgccggggc gaatgattgt cggcattgga ctgggcgaca gctcggtgga
     1021 aaccatgggc atgaagccgt caacgctggc gaactttgaa aaatcactcg aacaaatgcg
     1081 ccagattctc gacggtaaag aggcgcaatt gccgaccggt aagatccact tgctgcatcc
     1141 gactaagact cgcgtgccca tctacatcgc cgccagcggg ccgaagatgc tcgagctctc
     1201 cggtcgcatc gccgacggca tcattgtgct ggtcggagtc gccgacgatt acatcgctga
     1261 tgcgaaagag aaaatcgccg ccggcgccaa agtggccggt cggaaactgg cagatattaa
     1321 tttagttctc tgggtgcctt gcgcagtttc ggaaacggcg aacgccaaag acgcggtcaa
     1381 ggcccatgtc gcccgcgtgg tcgcccatcc gctgccctat gtgctcgatc acaacgagca
     1441 gaaaatctta caagagatcc gcaaaaccta cgactactac catcacatgg atcagcaggc
     1501 gaaccacgcc gatgtgattc ccgactggct ggtcgacaag ttcgccattg ccggcaccgt
     1561 cgctcaatgc aaagcgcaga tcgagcgcat caaaaaaacc ggcgtccagc aaatcgccat
     1621 cattccctac agtccgccgg gcggcagccg tgaagagacg attcgcggct tcgccaaggc
     1681 gatgagctga acctgccaat caagcgcttg cagcgggcga ctcgctttaa acaaatcgat
     1741 cgagaactat gctgagaatt agctgacaag tttgttattc aaagcgcatt ttcgtacggc
     1801 gctggtgccg ggaagccttg taatgcgctg aatatcaacg ttttcctctg gcacgtgtgt
     1861 tgctgccttc aaatttccgt agtggcgatc aagtatccct aacctatccg cggtcaggga
     1921 taaatcatat attttggccc aacgctgtgc agttccgaac ggctgagatt cagggagttt
     1981 cactacaaac tttgatcggt aatgcccgtc aaaagagatc cgggagaatt taaccatgaa
     2041 cgtacttat
//
LOCUS       DATIRS010000317         1934 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_615860, whole genome shotgun sequence.
ACCESSION   DATIRS010000317 DATIRS010000000
VERSION     DATIRS010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1934)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1934)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1934
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_615860"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1078
                     /locus_tag="VLM90_03925"
     CDS             <1..1078
                     /locus_tag="VLM90_03925"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12135.1"
                     /translation="SCQKGADLAPGVIKALLGVDIELLNADTESNVDTARTRAEKLIQ
                     EGAHCLVGPYDSGAAAAIAQVAEQRGVPFVINIAAAPQITEQGYKFVFRNFPIATELV
                     KNGLALAEELFKATGATPRTAVFMHVNDTFGQANAKALGALLPQLNLPFKLVDTISYD
                     PAAKDLNVEVAKAKTTKADFLLLVCRLNDAIALRREIVKQRWNVMGIVSPGSPGMYEN
                     QFFQALGKLSEGCISNVPWFDPKAALTKSVDSAFRKHNPKDQLKFNALNVGYTFEALL
                     IAADAFKRAKSTDAQPLTEAIRRTEIINRMMIGAPIKFNVKGQVEGNLSACIQNQAQQ
                     PVVVLPAASAEATPKFPWAEYKKA"
     gene            1300..>1934
                     /locus_tag="VLM90_03930"
     CDS             1300..>1934
                     /locus_tag="VLM90_03930"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSQ12136.1"
                     /translation="MNLDLFNLTNVIISGILTGLVYGLMALGLSVIFGVARVVNFAHG
                     EMMTLAMYASVILFGAFGLNPFIAVLPIAAIFFFLGYGLQRWIVNPFVTRPEHTQFML
                     LLAIAIILTNGQLIIFGPDARSVRLDSLLESIELGALLIDRGKLYAAMVALSTAAALL
                     NFFRFTRSGTAIRACADNWHGAKVVGLHVNQLYALSFGLGSLCVAVAGSMM"
BASE COUNT          416 a          595 c          496 g          427 t
ORIGIN      
        1 atcttgtcag aagggcgccg atctcgcgcc gggggttatt aaagcgctgc tcggcgtcga
       61 catcgagctg ctaaacgccg acaccgaaag caatgtcgac accgcgcgca cgcgggcgga
      121 gaaactgatt caggaaggcg cccactgttt ggtcgggccc tacgactccg gcgcagcagc
      181 ggccatcgcc caggtcgccg agcagcgtgg cgtgccgttt gtcatcaaca tcgccgcggc
      241 gccgcagatt accgaacagg gctacaagtt tgtctttcgc aatttcccga tcgcgacaga
      301 gttggtgaaa aacggccttg cgctcgccga ggagcttttc aaggccaccg gcgcaacgcc
      361 gcgcacggcg gtattcatgc atgtcaacga caccttcggc caagccaacg ccaaagcgct
      421 cggcgcgctc ctgccgcagc taaatctgcc gtttaagctg gtcgatacca tttcttacga
      481 tccggcggcg aaagacttga atgtcgaagt cgccaaggcg aaaacgacca aagccgattt
      541 tttactgctg gtctgccgct tgaacgacgc catcgcgctg cgccgcgaga tcgtcaaaca
      601 gcgctggaac gtcatgggca tcgtcagccc cggctccccg ggcatgtatg agaaccagtt
      661 tttccaagct ctcggtaaat tatccgaagg ctgcatttcc aacgtgccct ggttcgatcc
      721 caaagccgcg ttgacgaaat ccgtggacag cgcgtttcga aaacataatc cgaaagacca
      781 gctgaaattt aatgcgctca atgtcggtta tacctttgaa gccttgctga tcgccgccga
      841 cgccttcaag cgcgcgaagt cgaccgacgc ccagccgctc accgaagcga ttcgccggac
      901 tgaaataatc aatcgcatga tgatcggcgc gccgatcaag ttcaacgtca aaggccaagt
      961 cgaaggcaac ctttcggcct gcattcagaa tcaggcacag caacccgtgg tcgtgttacc
     1021 cgcagcatcg gccgaagcca cgccgaaatt tccatgggca gagtacaaaa aagcctagcc
     1081 gaaatttcga agcacgaaat ccgaaattcg aaacaaattc aaatgaccaa aattcaaatt
     1141 tttccaaaca agtttcatac ggactcgggg ttttggattt tccggatttg agatctattt
     1201 gtctctgagt ttgtttcgga tttcgatatt cggatttcgg attttctgtt gccagcgcct
     1261 tgacgtgacg ttacaagcga gacgccacag cctgaagaaa tgaacctcga cctcttcaac
     1321 cttaccaacg tcatcatctc cggcatcctc accggcctcg tctatggctt aatggcgctg
     1381 ggcctctcgg tcatcttcgg cgtcgcgcgc gtggtcaatt tcgcccatgg cgagatgatg
     1441 acgctagcca tgtacgccag cgtgattttg ttcggcgcct ttgggctaaa tccattcata
     1501 gccgttcttc ccatcgccgc gatcttcttt ttcttgggct acggcttgca acgctggatc
     1561 gtcaatccct tcgtcactcg tcccgagcac acgcaattca tgctgctgct cgccatcgcc
     1621 atcattctga ccaacggcca attgataatc ttcggccccg acgcgcgcag cgtgcggctc
     1681 gacagcttgc ttgaatcgat cgaactcggc gcgctcttga tcgaccgcgg caaactctac
     1741 gccgcgatgg tcgctctcag cactgcagca gcgctgttaa actttttccg cttcacccgc
     1801 agcggcacgg cgatccgcgc ttgcgccgac aactggcacg gcgccaaggt cgtcggcctc
     1861 cacgtcaatc agctctacgc cttgtccttc ggcctgggtt ccctctgtgt cgctgtcgcc
     1921 ggtagcatga tgat
//
LOCUS       DATIRS010000318         1997 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1598821, whole genome shotgun sequence.
ACCESSION   DATIRS010000318 DATIRS010000000
VERSION     DATIRS010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1997
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1598821"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            92..1063
                     /locus_tag="VLM90_03935"
     CDS             92..1063
                     /locus_tag="VLM90_03935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S) ferredoxin domain-containing protein"
                     /protein_id="HSQ12137.1"
                     /translation="MGRLTASAQCTTELDFHASGFLVRTQGNWTDGALAQFRHFLKLR
                     HLEPTTDELGEVLQRAKQEYSLGNQRLYACAAQPCCNKAGYDVSDQELSRLGNQIGAT
                     IVKTGCQGPCKQAPVLALRIGDKQEVFAEVARDEDWRALLKFVKAAVHANSLLVDTGA
                     AERFRFDPVHDHGKPSAHMKPLEFLLGHFRGEGRYAMAEYAFHKEVVGSFEAGGRFIA
                     LRMDASYPLADGRKDVHKAFVIVGAEPTGQISAHAYTDGGAMREYAIERHDDNLEFAD
                     VPPGHASQWKRARKILRPTADGFEERLEVDPGDGFVPYYVIPMQRVN"
     gene            1108..>1997
                     /locus_tag="VLM90_03940"
     CDS             1108..>1997
                     /locus_tag="VLM90_03940"
                     /inference="COORDINATES: protein motif:HMM:TIGR02122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HSQ12138.1"
                     /translation="MSRTLVMILAQLAIALLTVIPNLTHAQVKNRISIATGGTGGVYY
                     PLGGGMAALISKNIPNTEATAEVTTASVDNVKLLHGNRVGLAFSLPDTAWDGFSGVIK
                     GLPQKANIRALMALYSNFMHIVAADGSGIKSVADLKGKRVSTGAPGSGVEVKGLRVLE
                     AYGLTPKDLKNQERLGAGESAGALKDRKIDAFFWDGGLPTGAVLDLAATPGIKIHMIP
                     HGDAIPKMVAKYGPLYFTSNIPKGMYKGLDEDTAVAAATNLLIAHEKLDDNLAYQITK
                     LLLEHSADLVAVHKAASEMS"
BASE COUNT          442 a          619 c          555 g          381 t
ORIGIN      
        1 tcatttgtac ccgctgcctc gcgcccatcc acgaacccgt tccttgacgg caacgctcgg
       61 tccaaagtag attgcagcgc aaggagataa tatgggccga ttgaccgctt cagcgcagtg
      121 cactacggaa cttgacttcc acgcctcggg ctttctcgtt cgcactcagg gtaactggac
      181 cgacggcgcg ttggcgcagt tccgccattt cctcaaactg cgccatctcg aaccgactac
      241 agacgaatta ggcgaggtct tacagcgagc caagcaagaa tatagtttgg gaaaccaacg
      301 tctctacgca tgcgcagcgc agccttgctg caacaaagcc ggctacgatg tttctgacca
      361 agaactatcc cggctgggca accagatcgg cgcaaccatc gtcaagaccg gctgccaagg
      421 accttgcaaa caagcgccgg tgctggcgct gcggatcggc gacaaacaag aagtattcgc
      481 cgaagtggcg cgcgatgaag attggcgcgc gctgctcaaa tttgtcaaag ccgcggtgca
      541 cgccaattcc ctactcgtcg acaccggcgc ggcggaacga ttccgcttcg acccggtgca
      601 tgaccacggc aaaccgagcg cccatatgaa gcccttagaa ttcctcctcg gccacttccg
      661 cggcgaaggg agatacgcca tggccgagta cgcctttcac aaggaagtcg tcggtagctt
      721 tgaagccggc ggtcgcttca ttgcgctgcg catggatgct tcctatccgc tcgccgatgg
      781 ccgcaaggac gtgcacaagg cgttcgtcat cgtcggtgct gagcccaccg gccaaatcag
      841 cgcccacgcc tacaccgacg gcggcgcgat gcgcgagtat gccatcgaac gccatgacga
      901 taatcttgaa tttgccgacg tgccccccgg ccatgccagc caatggaaac gcgcgcgcaa
      961 aattcttcga cccacggcgg acggttttga agaacggctc gaagtcgatc ctggcgacgg
     1021 tttcgtcccc tattacgtca ttccgatgca aagagtgaat tgatgttgac ggcaaatctt
     1081 ccattccaac gatgaaaagc gagttccatg tctagaaccc ttgtgatgat cctcgcgcaa
     1141 ttagccatcg cgctgcttac cgtgattccg aatttgactc acgcccaggt gaagaatcgg
     1201 atctccatcg ccaccggcgg taccggcggc gtctattatc cgctcggcgg cggcatggca
     1261 gcgctgattt cgaagaatat tcccaacacc gaagcgacgg cggaggtcac caccgcgtcg
     1321 gtggataatg tcaaactgct gcacggcaac cgcgtcggct tggctttttc gctgcctgac
     1381 accgcttggg acggcttcag cggcgttatc aagggactgc cgcaaaaggc gaatattcgc
     1441 gctttgatgg cgctctactc aaatttcatg catatcgtcg ccgctgacgg gagcggtatc
     1501 aagtcggtcg ccgacctcaa aggcaagcgc gtgtccaccg gcgcgcccgg ctccggtgtc
     1561 gaagtcaaag ggctgcgcgt gctcgaagcg tacggcctca cgccaaaaga cctgaagaac
     1621 caggaacggc tcggcgccgg tgagtccgcc ggcgctctca aagaccgtaa gatcgacgcg
     1681 ttcttctggg acggcggtct gcccaccggc gcggtgctcg acttagccgc gaccccgggg
     1741 atcaaaatcc acatgattcc tcatggcgac gcgattccta aaatggtcgc gaagtacggc
     1801 ccgctctatt tcaccagcaa tatccccaaa ggcatgtaca agggcctgga cgaagacacg
     1861 gccgtcgcgg cggcgacgaa tctgctgatt gcccatgaaa aactcgatga taatcttgcc
     1921 taccagatca ccaagctgtt gctggaacac agcgccgatc tggtcgccgt gcacaaagcc
     1981 gcgagcgaga tgagctt
//
LOCUS       DATIRS010000319         1532 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1303788, whole genome shotgun sequence.
ACCESSION   DATIRS010000319 DATIRS010000000
VERSION     DATIRS010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1532
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1303788"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..317
                     /locus_tag="VLM90_03945"
     CDS             <1..317
                     /locus_tag="VLM90_03945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12139.1"
                     /translation="HFKEGPSISVAFGQLALMNRAPHPNAAKVFVNWLLSREGQSAFQ
                     RIISTPGEAKNSRRIDVPKDHIPAAERRVDGGKYFDPDDLNSRDIAPVSKLMDEIFAG
                     KK"
     gene            416..>1532
                     /locus_tag="VLM90_03950"
     CDS             416..>1532
                     /locus_tag="VLM90_03950"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSQ12140.1"
                     /translation="MLTKVGPGTPAGELLRRYWHPISIAADITPENPTKFVRILGEDL
                     VLYQTPNGEAGLLHDRCPHRGASLSYGRCEERGISCAYHGWLFNSKGECLETPAEPAD
                     SKFHLTVKQKAYPVKKLAGLYWAYMGPLPAPEIPKWDVWARTDGWHWLRALPTLDCNW
                     LQAMENSVDTTHLHILHQELVTDGFEVTSTTRGTIDNLDAYETEEFEYGIIKRRVFGD
                     GKIEEHPLLFPTWLRQANRTQIRVPIDDTHTYIVYVHFVPDAAGPRPAGGEVPVNYRR
                     PFKNPPDQCHPVAKHRLDEVDAQDFMAWETQGPIHDRTRERLGTSDRGIVVYREMLTR
                     EIKKVQQGLEPMNVFRDPNGPIIDTKLEESIKVGKAGG"
BASE COUNT          349 a          438 c          454 g          291 t
ORIGIN      
        1 atcactttaa agagggcccg agcatctccg tggcatttgg ccaacttgca ttgatgaacc
       61 gcgcgcccca tcccaacgcg gccaaggtat ttgtcaattg gctgctttcg cgcgaagggc
      121 aaagcgcctt ccagcgcatc atcagcacac cgggagaggc gaaaaactcg cggcgtatcg
      181 acgtgccgaa ggatcacatt ccggcggcgg agcggcgcgt cgacggcgga aagtattttg
      241 atccggacga cctgaattct cgggatattg ccccggtgag caagttgatg gatgagattt
      301 ttgccggtaa gaagtaaccg ggcctgttgc gcacggacga ttgaaaatag aagatagcgc
      361 gtccaagcgc caatcttaga gggggcttgc aatgataacc gcagaagaaa atgaaatgct
      421 gaccaaagtc ggacccggca cgccggcggg cgaattgctg cggcgctatt ggcatccgat
      481 ttcaattgct gcggatatta cgcctgagaa cccgacaaag ttcgtgcgta ttctcgggga
      541 agacctggtg ctttatcaga cgccgaacgg ggaggccggc ctgcttcatg atcgttgccc
      601 gcaccgtggc gcgtctctct cctacggccg ctgcgaagag cgcggtatct cgtgcgccta
      661 tcatggctgg ttgttcaaca gcaaaggcga atgtttggag acgccggcgg agccggcgga
      721 tagtaagttt catctaacgg tgaagcaaaa agcctacccg gtgaaaaaac ttgccggcct
      781 atactgggca tatatggggc cgctgccggc gccggagata cccaagtggg atgtctgggc
      841 gcgcaccgac ggctggcatt ggctccgcgc cctgccgacg ctcgactgta attggttgca
      901 ggctatggag aactcggtcg acacgacgca cctgcacata cttcaccagg agctggtcac
      961 cgacggcttt gaagtcacca gtacaacccg cggcaccatc gacaatttgg acgcgtacga
     1021 gaccgaagag tttgaatatg gaatcatcaa acggcgggtg ttcggcgacg gcaaaatcga
     1081 agaacatccg ttgctgtttc ccacctggct gcgtcaggcc aatcgcacgc aaatccgcgt
     1141 gccgatcgac gacacccata cctatattgt ctacgttcac tttgttcccg acgccgccgg
     1201 gccgcgtccc gccggcggcg aggtgcctgt caattaccgc aggcctttca aaaacccgcc
     1261 ggatcaatgc catccggtcg ccaaacatcg cctcgacgag gtcgacgctc aggatttcat
     1321 ggcttgggaa actcaagggc cgattcatga ccggacccgc gagcggctcg gcacctcgga
     1381 ccgcggcatc gtcgtttacc gcgagatgct aacccgtgag atcaagaaag tgcagcaggg
     1441 cttggagccg atgaacgtct tccgggatcc caacggcccg atcatcgaca ccaagctaga
     1501 ggagtcgata aaggtcggaa aagccggcgg ct
//
LOCUS       DATIRS010000320         2917 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_419258, whole genome shotgun sequence.
ACCESSION   DATIRS010000320 DATIRS010000000
VERSION     DATIRS010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2917
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_419258"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..180
                     /locus_tag="VLM90_03955"
     CDS             <1..180
                     /locus_tag="VLM90_03955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12141.1"
                     /translation="YCNKCGQAMPVRQRLLLVLPDGEMYDYTCQRCNSSVGSKTEKAG
                     VNQNSGGTKSRLGGL"
     gene            183..1214
                     /locus_tag="VLM90_03960"
     CDS             183..1214
                     /locus_tag="VLM90_03960"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12142.1"
                     /translation="MAVIDSDAHVLETEHTWDYMLASERALTPRIVPTPNDPSSGGES
                     WLIDGTYLGKARNVGADTSREAREMEDINARLRHMDELNIDVQVLYPTFCLRPFTRRP
                     DVELALARSYNRWLIDIWKAAPNRLRWVALLPLLSMDKAIEEARYAKENGACGIFIRG
                     LEGDKRLHDSYFYPLYEEAGKLDLPICVHSATGSFAVHDYFADECGFNRFKLAVVGSF
                     HSLIFYKIPEKFPKTKWAFIEVSAQWVPYAIHDYARRFERGGSAKIDKSQVLRKNNIW
                     VACQTDDDLPYVLKYSGDDMLVIGTDYGHNDTSSEILALRKLKEDGTIPTPVVNRILD
                     DNARALYGL"
     gene            1244..2269
                     /locus_tag="VLM90_03965"
     CDS             1244..2269
                     /locus_tag="VLM90_03965"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12143.1"
                     /translation="MIIDFQAHVFPEAYLAEMKRQDGVVILEAPDPHSGMSYFYDKKL
                     ACRINTCTLQGQNIERRLQHMDQHGVDIHVLTIPAPGADRFEGEGASQIARIANDAIA
                     AIARQHPKRFIGFFTLPTCNIKASLDELERSVNELGLRGFAGFANLNSQALDREELFP
                     IYERLAKYKLPVYIHPTAPLATVSSGIDIMPTLIFGWAYDSTVAMTRLVYGRVLERFP
                     EINWVVADVGGVLAFFAQRAINIYTGRTEEIRHKYGLQENPLDSFRRFYVDTADHPAS
                     TLRCVKDFFTPERMVLGTNYPYGPQEGCILLRNSLQAIDGLDLDAADKQKILGGNAAK
                     ILGLGAQ"
     gene            2266..>2917
                     /locus_tag="VLM90_03970"
     CDS             2266..>2917
                     /locus_tag="VLM90_03970"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HSQ12144.1"
                     /translation="MKFQKAARPVIMGQNGMVSSGHYLASLAGVEILKEGGNAVDAAL
                     AAAFVSSVVKPETSGPGGDLFALVSMKKTGKVEALNASGPAPARASIESFHERGLKTI
                     PQYGPLAIAVPGAVDGWLELHKKYGTIDLARLTADAVRLGREGFPISQEFSEAVHEYA
                     PEYPWVDKYYRQPFGVAKPGKILVQSGLAGVFEKIARQGRDGFYAGEIAEKMCATVN"
BASE COUNT          610 a          830 c          864 g          613 t
ORIGIN      
        1 tactgcaata agtgcggcca ggcgatgccg gtgcgccagc ggttattgct ggtattgccc
       61 gacggtgaga tgtacgacta cacttgtcag cgctgcaata gttcggtggg ttcgaaaacc
      121 gagaaagccg gtgtgaatca aaacagcggt ggcacaaaat ctcgcttggg aggactttaa
      181 cgatggcagt gatcgattcc gatgcccatg tgctcgagac cgaacatact tgggactata
      241 tgttggcgtc cgagcgggcg ctcacaccgc ggatcgttcc gacacccaac gacccaagct
      301 cgggcggtga atcgtggttg atcgacggca cttatctggg caaagcgcgc aacgtcggcg
      361 ccgatacttc tcgtgaagcg cgcgagatgg aggatatcaa cgcccggctc cggcatatgg
      421 atgagctcaa catcgatgtt caagtgcttt atccaacctt ttgcttgcgg ccgtttaccc
      481 ggcggcccga tgtcgagttg gccttagcgc gctcttacaa ccgctggctg atcgatatct
      541 ggaaagctgc gccgaatcgc ctgcgctggg tggcgctgct gccgctgctg tcgatggaca
      601 aagccatcga agaagcgcgt tacgcgaaag aaaacggcgc ctgcggtatt tttatccgcg
      661 gcctggaagg cgataagcgg ttgcacgata gctatttcta tccgctctac gaagaagccg
      721 gcaagctcga tctgccgatt tgcgtgcact cggccaccgg cagttttgcc gtgcatgatt
      781 atttcgccga cgagtgcggc ttcaaccgtt tcaagctcgc cgtcgtcggc tcgtttcatt
      841 cgctgatttt ctacaagatt ccggaaaagt ttcccaagac taaatgggcg tttatcgagg
      901 tcagcgccca gtgggtgccc tacgccattc acgattacgc ccggcgcttc gagcgtggcg
      961 gcagcgccaa gatcgacaaa tcccaagtgc tgcgcaagaa caacatctgg gtggcctgcc
     1021 agaccgatga cgatctgccc tacgtgctaa aatattccgg cgacgacatg ttggtgatcg
     1081 gcaccgacta cggccacaac gatacctcgt cggagatttt ggcgctgcgc aaattgaaag
     1141 aagacggaac gattccgacc ccggtggtaa accggattct cgacgacaac gcgcgcgcgt
     1201 tatacggctt ataggatggc tggtacagga gcggcaactt agcatgatca tcgattttca
     1261 ggcccatgtt tttcccgaag cctatctcgc cgagatgaag cggcaggacg gcgtggtgat
     1321 tctcgaagcg cccgatccgc atagcggcat gagttatttt tacgacaaga aactcgcctg
     1381 ccggatcaac acctgtacgc tgcaagggca gaacatcgaa cgccgcttac agcatatgga
     1441 tcagcatggc gtcgacattc atgtgttgac gatcccggcg cccggggcgg accgtttcga
     1501 gggcgagggc gccagtcaaa ttgcccgcat cgccaatgac gccatcgccg ccatcgcgcg
     1561 tcagcatccc aaacgtttca tcggtttctt taccctgccg acgtgcaata tcaaggcgtc
     1621 gcttgacgag ttggaaagat cggtcaacga gttgggcttg cgcggtttcg ccggcttcgc
     1681 caatctgaac agccaggcgt tggaccgcga agaactgttt ccgatctatg agcggctggc
     1741 taaatacaaa ctgcccgttt atatccatcc gaccgcgccg ctggcgacgg tctccagcgg
     1801 catcgacatc atgccgacac tgatcttcgg ctgggcctac gattccacgg tggcgatgac
     1861 ccggctggtt tatggccgag tgctggagcg ctttccggaa atcaactggg tggttgccga
     1921 tgtcggcggc gtcttggcgt tcttcgccca gcgggcgatt aatatctaca ccggccgcac
     1981 cgaggagatt cgccacaagt acggcttgca agaaaacccg ctcgattcgt tccggcgctt
     2041 ttacgtcgac accgcggatc atccggcatc gacgctgcgc tgcgtcaagg atttcttcac
     2101 accggagcgg atggtgctgg gaacgaacta tccctatggc ccgcaagagg gctgcatcct
     2161 gctgcgcaat agtctgcagg ccattgacgg cctcgatctc gacgccgccg acaagcaaaa
     2221 aatccttggc ggcaatgccg cgaaaattct tggattagga gcgcaatgaa gtttcaaaaa
     2281 gcggcccggc cggtgatcat gggccagaac gggatggttt cgtccggtca ttatctggcg
     2341 tccctcgccg gcgtcgagat tctcaaggaa ggcggtaacg cggttgatgc cgctctcgcc
     2401 gcggctttcg tctcttcggt ggttaaaccc gaaaccagcg ggcccggcgg cgatctgttc
     2461 gccctggttt cgatgaagaa aaccggcaag gtcgaagcgc tcaacgccag cggcccggcg
     2521 ccggccaggg cgagcatcga atcgttccat gagcgcggct tgaaaaccat tccgcaatac
     2581 gggccgctcg ccatcgccgt ccccggcgcg gtggacggtt ggctggagct gcacaaaaaa
     2641 tacggcacca tcgatttagc gcgcttgacc gccgatgcgg tgcggctggg ccgcgagggt
     2701 ttcccgattt cccaagaatt ttccgaagca gtgcatgagt atgcgcctga gtatccctgg
     2761 gtcgacaagt attatcgcca gccgttcggc gtggccaaac caggcaagat tctcgtgcag
     2821 tcgggcttgg ccggggtttt cgaaaagatt gcgcgtcagg ggcgcgatgg tttttatgcc
     2881 ggcgagatcg ccgagaaaat gtgcgcaacg gttaacg
//
LOCUS       DATIRS010000321         1739 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_419367, whole genome shotgun sequence.
ACCESSION   DATIRS010000321 DATIRS010000000
VERSION     DATIRS010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_419367"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(13..1107)
                     /locus_tag="VLM90_03975"
     CDS             complement(13..1107)
                     /locus_tag="VLM90_03975"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HSQ12145.1"
                     /translation="MATKGRAAIYVEPKKPLVVDEVEFADPGADQVLVKLFASGVCHS
                     QLHTMQRPARKGQSLPALLGHESTGVVVAKGRDVSHVKEGDHVITTWVDRDSATTNQP
                     MVAHALNDRTQYNAIWKGRNIMHSAATWAEYAIAQERVVLPMPKDLPTDVTSIVGCAV
                     MTGAGAIVNTLQTRPGQSVAVFGAGGIGLCAISAAAVVDAYPIIAIDVDSQKLAFAQR
                     MGASHGVNAKEVDAVQAIKDITGVGADYAIDAIGLPLTQEQILRSVRPGFSGLNQGGT
                     ALLVGITPPDAKALIDTSLFIGNRSFKRTSGGDCKPERDFPIFLRWFRDGKLKLNELI
                     TSRYKLEQINQAVDDLEHGRILGRAILTFD"
BASE COUNT          367 a          502 c          490 g          380 t
ORIGIN      
        1 attcttcgtc gatcaatcga aggtcaaaat ggctcgccct aatattcgac catgttccag
       61 gtcgtctacc gcttgattga tctgctcgag tttgtaccgg ctggtaatca gctcgttcaa
      121 tttcagttta ccgtcacgga accagcgcag gaagatcggg aaatcgcgtt ccggcttgca
      181 atcgccgccg ctggtgcgtt tgaacgagcg attgccaata aacaggctgg tgtcgatgag
      241 cgccttcgca tcgggtggcg tgatgccgac gagcagagcg gtaccgcctt ggttgagtcc
      301 ggaaaatcct ggccggaccg agcgaagtat ctgctcctgc gtcaatggca agccgatggc
      361 gtcgatcgca tagtcggcgc caacgccggt gatatccttg atcgcttgca cggcgtcgac
      421 ttccttcgcg ttgacgccat ggctcgcgcc catgcgttga gcgaaggcta acttttgtga
      481 atcgacgtcg atggcgataa tcggataagc atcgaccacc gccgctgccg agattgcgca
      541 aaggccgatg ccgccggcgc caaatacggc gaccgattgc ccgggccgcg tttgcagcgt
      601 gttaacgatc gcgccggcgc cggtcatgac ggcgcaaccg acgatcgaag tgacatcggt
      661 cggcaaatcc ttcggcatcg gcaggacgac ccgctcctgg gcgatggcat attcagccca
      721 ggtggccgcc gaatgcatga tattccggcc tttccagatg gcgttgtact gcgtgcggtc
      781 gttgagcgcg tgcgccacca tcggctggtt ggtggtcgca ctgtcgcgat cgacccaggt
      841 ggtgatcaca tgatcgcctt ccttaacatg gctaacatcc cgccccttag cgacgacaac
      901 gccagtggac tcatggccca gcaaggccgg tagactttgt cccttgcgcg ccggccgctg
      961 catagtgtgc agttgcgagt ggcaaacacc gctggcaaag agcttgacta aaacctgatc
     1021 cgctccggga tcggcaaatt caacctcatc gaccaccaat ggttttttcg gttctacata
     1081 gatcgccgcc cgcccctttg tggccattct acctccgatc cgacaaacga agttcaccac
     1141 gtcgagaaaa cttcacgcgg tcattctcgt tcttgacgga tatctacggt gaatggctga
     1201 aattgtctag agcttttgat ttagcctggc aagcgggaac tgaaacaata tctcgcgcca
     1261 agcacgcaaa gggcgcaagg gaagaacgtt gtcatttcga acggagagag aaatccttct
     1321 tagatccctc gcattcgctc gggatgacga gcctcagtcg gtcactttgt gaccttggcg
     1381 tccttggcgc gaggaatatc cgaaaatgag gcgctctggg cagagaagaa ttgcgcgctg
     1441 cgaagattct caacgttagt atcccacgca aagtaaaacc caagaagaat tccgatcgta
     1501 ggggcgtatg gcatacgccc ggtggcggcg gcgcggcgtc tcgactatcg caccgagaag
     1561 cgctgctcgc gctgccgtga ttatggcggg tttgctacga aatcgacgcg gtacctattc
     1621 ggcgcaccca tgactttatc tagcgcgcac tcaaagcatc aatttcaacg gccgcaacca
     1681 ggagttgccc ttctcgagtc cgcgcagttc atcgacctgc agcttgctca cttgcagtt
//
LOCUS       DATIRS010000322         2330 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1795870, whole genome shotgun sequence.
ACCESSION   DATIRS010000322 DATIRS010000000
VERSION     DATIRS010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2330
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1795870"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..192)
                     /locus_tag="VLM90_03980"
     CDS             complement(<1..192)
                     /locus_tag="VLM90_03980"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HSQ12146.1"
                     /translation="MAIKSIGIVGCGAIGKALVRAVEDGKLSVRIAGVTSRTSESARQ
                     FLAAFRNPPRYLPLDELIAA"
     gene            430..717
                     /locus_tag="VLM90_03985"
     CDS             430..717
                     /locus_tag="VLM90_03985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12147.1"
                     /translation="MPAYEIYFRCDDCKREHTIHMKIHLTEGPDRKQSLAEFFAGRSM
                     PPQVSSLQGHNAFCLKTGRRFKLDKDEQILLVPPSAISLPPRQPQLIPDRN"
     gene            complement(770..1186)
                     /locus_tag="VLM90_03990"
     CDS             complement(770..1186)
                     /locus_tag="VLM90_03990"
                     /inference="COORDINATES: protein motif:HMM:NF016153.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF420 domain-containing protein"
                     /protein_id="HSQ12148.1"
                     /translation="MITAAQLPTLNAALNTLSAVFLCAGYFFIRRKNRGAHQRCMLAA
                     VSCSILFLISYLVYHYQVGSIGFKGQGWIRPVYFTILITHTILAAAVVPLVLLTLIRA
                     LRERFDAHRRIARWTFPIWLYVSVTGVVIYLMLYGI"
     gene            complement(1183..1461)
                     /locus_tag="VLM90_03995"
     CDS             complement(1183..1461)
                     /locus_tag="VLM90_03995"
                     /inference="COORDINATES: protein motif:HMM:TIGR02229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C oxidase subunit IV family protein"
                     /protein_id="HSQ12149.1"
                     /translation="MSSTAHSHHNYIKIFIILSVLTAVEIGVTFLGLPRTLLVALLVG
                     LAVWKAALVALHFMHLKIEKKTLTIVAIIPFILCVFLSLMLLPDIYPR"
     gene            complement(1483..2091)
                     /locus_tag="VLM90_04000"
     CDS             complement(1483..2091)
                     /locus_tag="VLM90_04000"
                     /inference="COORDINATES: protein motif:HMM:NF012720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HSQ12150.1"
                     /translation="MSEAVAVHGAVEPAETPLTPESWGKLGMWLFLAGDAMSFGGLIV
                     AYGALRYHSKSWPVPAEVLGINLTALMTFLLIVSSVTMVLGLAALQDGDKPRFKKFMS
                     LTILGGAIFLGLQAYEWTHLIGHTLPQYKLAFSTDLFATTFFVLTGFHGMHVSGGVIY
                     NICVLAAVNRGRYQAKHVEIAGLYWHFVDLVWILIFTFVYLL"
     gene            complement(2088..>2330)
                     /locus_tag="VLM90_04005"
     CDS             complement(2088..>2330)
                     /locus_tag="VLM90_04005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12151.1"
                     /translation="LPTLAKACSVCFSGDDDAVTHAFNWSVGFLLASPYAIAGTIAGC
                     LVIAYRRAAARQARLAELEVQEAINPLIWTQEESAK"
BASE COUNT          592 a          682 c          640 g          416 t
ORIGIN      
        1 cgctgcgatt aattcatcta aaggaagata ccgcggcggg tttctaaaag ccgcgagaaa
       61 ctgccgcgcg ctctccgacg ttcggctggt gacgccggca atgcgcaccg acagtttgcc
      121 atcttccacg gcgcgcacca gcgccttgcc aatcgccccg caaccgacaa tgccaatcga
      181 cttgatcgcc ataaatcgcc atcaacctca tcagaaagtg ttagcgctcg tctatctagc
      241 ttgaagcgtt ttgccctgtc aatcgacgcc agcgggttaa gacgatcaac gcgatatctg
      301 gcggaaacgg catagtaagc gatatccagc tcatagccac gccaagcgag tcaaaattca
      361 aatggcgcgc cgattaaaat tcacatggaa aagattggca aatccttcgc atgatggtag
      421 atgacatcta tgccggcgta cgaaatttac ttccgttgcg acgactgcaa acgcgaacat
      481 accatccaca tgaagatcca cctcaccgaa ggaccggatc gcaagcaaag tcttgccgaa
      541 ttcttcgccg gccgttcgat gccgccgcag gtatcgtcgc tacaaggcca taacgcgttc
      601 tgtctaaaaa ccgggcggcg cttcaaactc gacaaagacg agcaaatcct gttggtgccg
      661 ccatcagcca tcagcttgcc gccgcgccag ccacagttga tccctgatcg taattgaccc
      721 gcaagagaag gcgcggccaa ggcaggcagc ggggcgcgtt aaatcatcgc tagatgccgt
      781 acagcatcag ataaatcacc acaccggtga ccgaaacata cagccagatg ggaaacgtcc
      841 agcgggcgat acgccggtgc gcgtcgaagc gctcgcgcag ggcgcggatt agcgtcagca
      901 gcaccagcgg caccacggcg gccgcgagaa tcgtgtgggt gataaggatc gtgaagtaga
      961 ccgggcgaat ccaaccttgg cctttgaagc cgatcgaccc gacttggtag tggtacacca
     1021 gataagagat cagaaagagg atagagcaag acaccgccgc cagcatgcag cgctgatggg
     1081 cgccgcggtt tttgcggcga atgaagaagt aaccggcaca aaggaaaacg gcgctgagtg
     1141 tattcagcgc cgcgttcaga gtcggaagtt gcgcagcggt gatcaccgcg ggtagatgtc
     1201 cggcagcaac attagactga gaaaaacgca cagaataaac ggtattatcg cgacgatcgt
     1261 cagggtcttc ttctcgatct tcaagtgcat gaagtggagc gccaccagcg cggccttcca
     1321 caccgccaga ccgaccagca aggcgaccag cagcgttctc ggcaaaccca gaaacgtcac
     1381 gccgatctcg acggcggtca gcaccgagag aatgatgaaa atcttaatgt agttgtgatg
     1441 cgagtgagcg gtcgatgaca tgagactccc tctaatgttt gactataaca gatagacgaa
     1501 cgtaaagatc aaaatccaca cgagatcgac gaagtgccaa tagaggccgg cgatctcgac
     1561 atgcttggcc tggtagcggc cgcgattgac cgccgccagc acgcaaatat tgtaaatcac
     1621 cccgcccgaa acatgcatgc catgaaagcc ggtcagcaca aaaaatgtcg tcgcgaataa
     1681 atcggtgcta aaggccaatt tgtactgggg cagggtgtgg ccgatcagat gcgtccactc
     1741 ataggcttgc aggccgagaa agatcgcgcc gccaaggatg gtcaggctca tgaacttttt
     1801 gaagcgcggc ttatcgccgt cctgcaacgc ggccaagccc aataccattg tcacgctgct
     1861 gacgatcagc aagaatgtca tcagcgccgt caggttgatg cccagcacct cggcgggaac
     1921 cggccagctt ttgctgtggt agcgcaaggc gccataggcg acaatcaggc cgccgaacga
     1981 catcgcgtcg ccggcgagaa acaaccacat gccgagcttg ccccagctct ccggggtcaa
     2041 gggggtttcg gcgggctcca ccgcaccatg caccgctacc gcttcactca tttcgcgctc
     2101 tcctcctggg tccaaatcag cggattaatc gcttcctgca cttccagctc tgccaacctt
     2161 gcttgcctcg ccgccgctct gcggtacgca atcactaaac atccggcaat ggttccggcg
     2221 atggcgtagg gcgaggcgag caggaaaccg acgctccagt tgaaggcgtg ggtcacagcg
     2281 tcatcgtcgc cggaaaaaca cacagaacag gccttggcca gcgtcggcaa
//
LOCUS       DATIRS010000323         2409 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1501038, whole genome shotgun sequence.
ACCESSION   DATIRS010000323 DATIRS010000000
VERSION     DATIRS010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2409)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2409)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2409
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1501038"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1172
                     /locus_tag="VLM90_04010"
     CDS             <1..1172
                     /locus_tag="VLM90_04010"
                     /inference="COORDINATES: protein motif:HMM:NF014516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12152.1"
                     /translation="AQRQASFGALRSAVESAEAAVTQSRIRNAALGEIRENTHVNLAN
                     RLSQRDTTTQEIASWQSRGADCQRQRSEIAEALGQTEASLSGGREEHQGLESRLQADR
                     QNYRNISMQLAEIGETIKELRPLGESCQEERSQIQLVLAEKRLNLQHLADNLREKYDT
                     DLVSLAHQADDDGPSRDQLLLDIEELRGRLERMGEVNLAAIGEYEELTTRFQFMSQQK
                     EDLEKSIADLQQTIVKLNRICRLRFKETFEAINEKFEAIFPRLFRGGKAKLVLTDEND
                     FLETGVDIIVQPPGKKLQSITLLSGGEKALTAVSLLFAIFLTKPSPFCFLDEVDAPLD
                     DANLDRFNDIIHEMSSHSQFVLVTHNKKTMESAEMLYGITMAEPGVSKVVSVRMN"
     gene            1403..2329
                     /gene="ftsY"
                     /locus_tag="VLM90_04015"
     CDS             1403..2329
                     /gene="ftsY"
                     /locus_tag="VLM90_04015"
                     /inference="COORDINATES: protein motif:HMM:TIGR00064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HSQ12153.1"
                     /translation="MAVGAFFQRLKQGLTKSRETWVQKIGAILQNRQWDEQSLDEMEE
                     SLITADVGVKATEKLMRALRRQAPGNSEDLSQDMSSKLQAAMVDMLRGSVAAPKRARL
                     SARPWVVIFLGVNGVGKTTTIGKLAAQYRKDGKKVLLVAGDTFRAAAIEQLDAWGQKV
                     GVDVVKHKAGADPSAVVFDGMQAAKARNVDVLLIDTAGRLHTKVHLLEELKKIRRVII
                     RELPDAPHETLLVLDATTGQNGLQQARVFKEATDISGIVLTKLDGTAKGGVIISIQEE
                     LGVPVQYISVGEDVEDLQPLEAESFVQALFEK"
BASE COUNT          566 a          749 c          677 g          417 t
ORIGIN      
        1 tggcgcagcg gcaggcgagc ttcggcgcat tgcgcagcgc cgtcgaaagc gccgaagcgg
       61 cggtgacgca atcgcgtatt cgcaatgccg ccttagggga aatacgcgag aacacccatg
      121 tcaatctcgc caatcgctta agccaacgag atactaccac acaagagatc gcgagctggc
      181 aaagccgcgg cgccgattgt caacggcagc gcagtgaaat cgccgaagcg ctgggccaaa
      241 ccgaagcttc gttgagcggc ggccgggaag aacaccaggg cctagagagc cggcttcagg
      301 ccgaccggca aaattatcgg aatatctcca tgcagcttgc cgagatcggc gagaccatca
      361 aggagctgcg cccgctgggc gaaagctgcc aggaagagcg tagccaaatt cagctggtgc
      421 tggctgaaaa gcgtctcaac ctgcagcacc tggctgacaa cctgcgcgag aaatacgaca
      481 ccgacttggt ttccctcgcc catcaggcgg acgatgacgg accgtcgcgc gatcagctgc
      541 tgctcgacat cgaagagctg cgcggacgcc tggaacggat gggcgaggtc aacctggccg
      601 ccatcggcga gtacgaagag ctgaccaccc gcttccagtt catgagccag caaaaggaag
      661 atctggaaaa atccatcgcc gacctgcagc agaccatcgt caagttgaat cgcatctgcc
      721 ggctgcgttt caaagaaact ttcgaagcga tcaacgagaa gttcgaggcg atcttcccgc
      781 gcctgttccg cggcggcaaa gccaagctcg tgctcaccga cgaaaacgac tttctcgaaa
      841 ccggcgtcga catcatcgtc caaccgccgg gaaaaaagct ccagtcgatc acgctcttgt
      901 ccggcggcga gaaggcgctc accgcggtga gtttgctgtt cgcgatcttt ttaaccaagc
      961 cgagcccctt ctgcttcctg gacgaggtcg acgcgcccct cgacgacgcc aatctcgacc
     1021 gtttcaatga catcatccac gagatgagca gccactcgca gttcgtcctg gtgacccata
     1081 acaagaagac catggaatcg gcggagatgt tgtacggcat caccatggcc gaacccggcg
     1141 tctccaaagt cgtctctgtg cgcatgaact gatcgcctgt cggctccaag tcgagggctg
     1201 tgattttgtc gattcgaagt tgaaatccct tctgtcattt cggcgcaagc cggaatccgg
     1261 gtggcgtctg ggccgtcatg gcgaacgtca cttcgcttaa gaattctcta ccatcctcga
     1321 tcgagacact aattcccact ccacgccgag ctttttgagc ttgccgtttg actctcaaca
     1381 ccgcttcgca gaatatcgaa tcatggcagt cggcgctttt tttcaacggc tcaaacaagg
     1441 attaaccaaa agccgcgaga cctgggtgca aaagatcggc gcgatcctgc aaaatcgcca
     1501 atgggacgaa cagtccttag atgagatgga agagagcctg atcaccgccg atgtcggcgt
     1561 caaagccacg gaaaagttga tgcgggcgct gcgccgtcag gcgccgggca acagcgaaga
     1621 tctcagccag gacatgtcgt ccaaactgca agccgccatg gtggacatgc tgcgcggctc
     1681 ggtcgccgcg cccaagcgcg cgcggctttc ggcgcgcccc tgggtggtaa tctttctcgg
     1741 cgtcaacggc gtcggcaaga caaccaccat cggtaaattg gccgcccagt accgcaagga
     1801 cggcaaaaag gtattgctgg tcgccggcga cactttccgc gccgctgcca tcgagcagct
     1861 cgacgcctgg ggccaaaaag tcggcgtcga tgtcgtcaaa cacaaggccg gcgccgatcc
     1921 ctcggcagtg gtcttcgacg gcatgcaagc ggccaaagcc cgcaacgtcg acgtgctgct
     1981 catcgacacc gccggccgtc tgcacaccaa agtccatctg ctcgaagagc taaaaaaaat
     2041 ccgccgggtc atcatccggg aactgcccga tgcgccgcac gaaaccttgc tcgtcctcga
     2101 cgccaccacc ggtcagaacg gcttacagca agcccgggtg ttcaaagagg ccaccgacat
     2161 cagcggcatc gtcctgacca aactcgacgg cacggccaaa ggcggcgtca tcatcagcat
     2221 ccaagaagaa ctcggcgtcc cagtccaata tatcagtgtc ggcgaggacg tcgaagatct
     2281 ccagccctta gaagccgaaa gcttcgtcca ggcgctattc gagaaataac ctgacccagt
     2341 ctgatgcacg ggtcggcaat cggccgatcg cagcggcaga ccagcgcgta accaccttga
     2401 cttgatcgg
//
LOCUS       DATIRS010000324         1576 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1009691, whole genome shotgun sequence.
ACCESSION   DATIRS010000324 DATIRS010000000
VERSION     DATIRS010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1576
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1009691"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1434
                     /locus_tag="VLM90_04020"
     CDS             <1..1434
                     /locus_tag="VLM90_04020"
                     /inference="COORDINATES: protein motif:HMM:NF014027.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008612 - peptidyl-lysine modification to
                     peptidyl-hypusine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyhypusine synthase family protein"
                     /protein_id="HSQ12154.1"
                     /translation="RSLDLQKCDSVGDIVDAMRYCAFGARMLGEVAKTICEMATAQDQ
                     PLLIYDGLEKTPLGRLLKQFVKNRWCRRIVTPSAYAKMQTRGGNVIVVGAFSERDAEP
                     IYKKPKRAIFINPFDMARPGQVRDGFFPDAVFADPRFIMPVIYAALDEWLNGKRSSVS
                     SFISGLAANGGLAAQVARGAKALEAMTGDKDCVRFLTVSGAMTVGKMDLVICDMIELG
                     LIHAISSTGALMAHGLVSSIGLKHYKYNPKFDDTELARRKLNRVTDTLEPETNLDTVE
                     EVIGKVIDKIDGKAMLSPTAFNKLIGKHLAENYPDDRGVLKSAYQHGVPVFVPAFVDS
                     ELGNDIYIHNIKRRRRGKKPILMNLELDSKELIRVVTGPKRFGILSIGGGVPRNNVQN
                     VAPLIEIINERLGPTFPNRKFCYGVRICPDRPHFGHLSGCTYSENESWRKADKNGIYA
                     EMLADATQVWPFLVKYVMEKQSGRVGD"
BASE COUNT          336 a          447 c          468 g          325 t
ORIGIN      
        1 cgatccctcg atctgcaaaa gtgcgacagc gtcggcgata tcgtcgacgc gatgcgctac
       61 tgcgccttcg gtgcgcgcat gctcggcgaa gtggccaaga ccatttgtga gatggcgacg
      121 gctcaagacc agccgctgct gatctatgac ggtctggaga agacaccgct ggggcgactg
      181 ctcaagcaat tcgtcaagaa tcgctggtgc cggcgcatcg tgacgccatc ggcctacgcc
      241 aagatgcaga ctcgcggcgg caatgtcatc gtcgtcggtg cgttctccga gcgcgatgcc
      301 gagccgattt ataagaagcc caagcgcgcc atctttatta accccttcga catggcgcgg
      361 cccggccagg tgcgcgacgg gtttttcccc gatgcggtgt tcgccgatcc gcgcttcatc
      421 atgccggtga tttacgccgc tctcgacgaa tggttgaacg gcaagcgcag ctcggtcagt
      481 tccttcatct ccgggctggc tgccaatggc ggcctggcag cgcaggtggc gcgcggcgca
      541 aaagctcttg aagcgatgac cggcgataag gactgcgtgc gctttctcac ggtcagcggc
      601 gccatgaccg tcggcaagat ggatctggtt atctgcgaca tgatcgagtt gggattgatc
      661 cacgcgatct cgtccactgg cgcgctgatg gctcatggct tggtgtcgtc catcggtctc
      721 aagcattaca aatacaatcc caagttcgac gacaccgagc tggcgcggcg caagctcaac
      781 cgcgtgaccg atacgctgga gccggaaacc aatctggaca ccgtcgaaga ggtgatcggc
      841 aaggtgatcg ataagatcga cggcaaggcg atgctcagtc cgacggcgtt caacaaattg
      901 atcggcaagc acttggccga gaattatccc gacgatcgcg gcgtgctgaa gtcggcatac
      961 cagcatggag ttccggtgtt cgtgccggcg ttcgtcgatt cggagctggg caacgatatc
     1021 tatattcaca acatcaaacg gcgccggcgc ggcaagaaac cgatcctgat gaacctggaa
     1081 ctggacagca aggagttgat tcgcgtggtc accgggccga agcgttttgg tatactttcc
     1141 atcggcggcg gcgtgccgcg taacaacgtg caaaacgtcg cgcctttgat cgagatcatc
     1201 aacgaacgct taggcccaac tttccccaat cgcaaattct gctatggcgt gagaatctgc
     1261 cctgacagac cccacttcgg ccatctctcg ggctgcacct attctgaaaa tgagtcgtgg
     1321 cgcaaggctg acaagaacgg catctacgcc gagatgctcg ccgacgcgac tcaggtgtgg
     1381 ccgttcttgg tgaaatacgt gatggagaaa cagtcggggc gagtgggcga ctaggacgtc
     1441 gagacatcga taaaattttc gccgcggcat atcggctggt cggcttacat tatcaattgc
     1501 gaaatttacc tccatgtatc gttttgaccg ggccattgat taatttcccc ggcgtgcgaa
     1561 aggaagcctg cccatg
//
LOCUS       DATIRS010000325         1658 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_911013, whole genome shotgun sequence.
ACCESSION   DATIRS010000325 DATIRS010000000
VERSION     DATIRS010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1658
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_911013"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..380)
                     /locus_tag="VLM90_04025"
     CDS             complement(<1..380)
                     /locus_tag="VLM90_04025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12155.1"
                     /translation="MAFIGKLGDQTFTVDIEETGKSVYRVSVDGNEFIVDGKKTGRTN
                     YSLIVDNRSFEIEVDNIDDDYRVLVDGRNYHVNLVDERRVRVGGAQGCLELHGRQKVV
                     VPMPGKILAVLVSEGDQVEKGQGLV"
     gene            complement(392..>1658)
                     /locus_tag="VLM90_04030"
     CDS             complement(392..>1658)
                     /locus_tag="VLM90_04030"
                     /inference="COORDINATES: protein motif:HMM:NF014805.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HSQ12156.1"
                     /translation="KFAQRCKDEGIVFIGPSPEVIDQMGDKVKARQLMKAAGVPVVPG
                     SDGILTSEEEVLQTMEEIGYPCMLKAVAGGGGKGLRLVRSRREVSSAYRAVGSEAKSS
                     FGDPRLYVEKFIVKPRHVEIQILADSYGRVIHLYDRECSIQRRHQKVIEESPAPGLED
                     RTRRRIGRIAIQGARAVGYVGAGTLEFLLDSEQSFYFLEMNTRLQVEHAVTERVVGID
                     LVKAQIEIAAGGYLPWRQRHITQTGHAIECRIYAEDPERDFMPCPGRIEGLRLPEGLG
                     LRNDNGVYEGAEVPIYYDPMIAKLITWGENRIEAILRMRRALREYQVRGIKTNISFHQ
                     SILRHPRFMSGDVNTGFIEEEFNPKANEEVYPHKEIALASAAIAALHGEHERTIGLLA
                     KGAAEPSKWRQQRASLRRSAAPGNRGWRR"
BASE COUNT          315 a          513 c          481 g          349 t
ORIGIN      
        1 accagcccct ggcccttttc gacctggtcc ccctcggaca ccaggacagc gagaattttc
       61 cccggcatcg gcacgacaac cttttggcgc ccatggagtt caaggcagcc ctgggcaccg
      121 ccgacgcgca cacgccgctc atcgaccagg ttaacgtggt aattgcgccc atcgaccagc
      181 actcgatagt catcgtcgat gttgtcgact tcgatctcga aggaacgatt gtcgacaatc
      241 agtgaatagt tggtccggcc ggtcttcttc ccgtcgacga taaattcatt gccgtcgacc
      301 gagacccggt aaaccgattt accagtttcc tcgatgtcga cggtgaaggt ttgatcgccg
      361 agcttaccga taaacgccat ggggatatcc tctaacggcg ccagccgcgg ttgccgggcg
      421 cggccgaccg gcgcaatgac gcgcgctgct ggcgccactt ggacggctcg gccgcgcctt
      481 tggcaagcaa gccaatggtc cgttcatgtt cgccgtgcag cgccgcgatg gccgccgagg
      541 cgagcgcgat ctccttgtgc gggtagactt cttcgttggc cttgggatta aattcctctt
      601 cgataaaccc ggtgttgacg tcgccggaca tgaaccgggg atgacgcaaa atcgattgat
      661 gaaacgaaat attggtcttg atgccgcgca cctggtactc gcgcagcgcc cggcgcatgc
      721 gcagaatcgc ctcgatgcga ttctcgcccc aggtgatcaa cttagcgatc atcggatcgt
      781 agtatattgg cacttcggcg ccctcgtaga cgccgttatc gtttctcaag cccagccctt
      841 cggggagacg caatccttcg atccggccgg ggcaaggcat gaagtcgcgc tcgggatctt
      901 cggcgtaaat ccggcattcg atggcgtggc cggtctgagt gatatggcgt tggcgccatg
      961 gtaaataacc gcctgcggct atttcgatct gcgccttgac cagatcgatg ccgaccaccc
     1021 gctcggtcac cgcatgctcg acttgcaggc gggtgttcat ttccaagaaa taaaaactct
     1081 gctcgctgtc gagcaaaaac tccagcgtcc cggcgccgac atagccgacg gcacgggcgc
     1141 cttggatggc gatccggccg atgcgccggc gcgtgcggtc ttccaaccct ggagccggcg
     1201 actcttcgat aactttctga tggcgccgct ggatcgaaca ctcgcggtcg tagagatgaa
     1261 tcacccggcc gtagctatcg gcgaggattt gaatctcgac atgacgcggt ttgacaatga
     1321 acttttcgac gtacaggcgc ggatcgccga aggacgactt ggcttccgaa ccgacggcgc
     1381 gataggccga cgacacttcg cgccgtgagc gcacgagccg tagccctttg ccgccgccgc
     1441 ccgccaccgc ctttaacatg catggatagc cgatctcttc catggtctgg agtacttcct
     1501 cttcggaagt gagaatgccg tcggaccccg gcaccaccgg cacgccggcg gctttcatga
     1561 gctggcgcgc tttaactttg tcgcccatct gatcgatgac ttcgggtgaa gggccgatga
     1621 agacgatgcc ttcgtctttg cagcgttggg cgaacttg
//
LOCUS       DATIRS010000326         2765 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1796247, whole genome shotgun sequence.
ACCESSION   DATIRS010000326 DATIRS010000000
VERSION     DATIRS010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2765)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2765)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2765
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1796247"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(246..1238)
                     /locus_tag="VLM90_04035"
     CDS             complement(246..1238)
                     /locus_tag="VLM90_04035"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12157.1"
                     /translation="MRVHRIAVLGFLLIVVPLHKDAGADKLIGIHSAIAISQSLPWIA
                     RDAGIFRKHNLEFDLVLMRSASTAAAAMIGGETDVGIIGGIGILSAYVQGAQDFVIVG
                     GVKNILTHSIVAKPEIKRPEDLKGKSIGVNRLGSNNHYFAIQVLQRIGLDPAKDVIFR
                     QTGGDAADLIALLNGSVDASAMLTYGQNAVAQGFHYLIYGPDLRIPYAAAAFVSRRSV
                     IARKPQVIGQFMRSMAEASKIFHAERETTLKILAKYLRVSDRKVLETSYNNELKAMEP
                     RFDVRPEALQAILDELAINDPRAKKVQPQQLIDRRYLEEMERSGFFDSLWGGKR"
     gene            1733..2740
                     /locus_tag="VLM90_04040"
     CDS             1733..2740
                     /locus_tag="VLM90_04040"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12158.1"
                     /translation="MKLRWISFLMLLLCSPLTALAAAAAPLRVNIGAASVSSSMLSLW
                     AAQEQGLFAKHGIDAQLILIRGGSTLVASLVTGEIQLAFTSGVSVLGAAAQGIDVKML
                     TSISSRVSWKLVANPQIKTAAELRGKRFGVQSIVGSTWMYAMLALEQLGLEPKRDNIS
                     FLPIGDAVTIGHSLEAGRIDAAVLDPPLSRRLTGKGFSQLVDLAKTNASFPGLGVGVT
                     RNYLDQQPTTLEKVVTALTEGLAFAQLPANKPVVLKILMKHLRVTDSVVAEDGYQDHL
                     STLNRKPYPSLDGLRSAQRLMAQQNPKIATLKVEDLVDARFVRKLDESGFIDRLYTAQ
                     R"
BASE COUNT          565 a          735 c          846 g          619 t
ORIGIN      
        1 ttgccgacgc caaaaagcag ggtctcgaac ctgagttgat tcccgccgaa gagatcgaag
       61 cacttgccaa ggaagtgctg acccagccgg ccgatgtgat cgcgtcgatg aagaaagtca
      121 tgggagagta ggggggatga agattggagt gttggagtag tggagtattg gagtgttggg
      181 tctcggaatt ccgaaaaccc atgactccac cactccaata ctccatcact ccaatttgtc
      241 ttctcttacc gcttgccgcc ccacagactg tcgaagaacc cgctgcgttc catttcttcc
      301 agatagcggc ggtcgatgag ctgctggggt tgaactttct tggcgcgcgg gtcgttgatg
      361 gcgagctcgt ccaggatcgc ttgcagcgct tctggccgca cgtcgaatct cggctccatg
      421 gctttgagtt cgttgttgta cgaggtttcg aggactttgc gatcgctgac gcgcaagtac
      481 ttggctaaaa tcttcaatgt cgtttccctc tcagcgtgaa aaatcttcga cgcctcggcc
      541 atcgagcgca tgaactggcc gatcacctgc ggtttgcgcg cgatcacgga acgccgggag
      601 acgaaagccg cggcggcgta gggaatacgc aggtcggggc cgtagatcaa atagtgaaaa
      661 ccttgggcga cggcgttttg accgtaggtc agcatcgccg aggcgtccac cgagccattg
      721 agcagcgcga tcaggtcggc ggcatcgccg ccggtctggc gaaagatcac atccttggct
      781 ggatccaagc cgatacgctg caaaacttgg atggcgaaat aatggttgtt gctgccgagg
      841 cggttgacgc cgatgctttt gcccttgaga tcttccggcc gtttgatctc cggcttggcg
      901 acgatgctgt gcgtcagaat attctttacc ccgccgacga tgacgaagtc ctgggcgcct
      961 tggacatagg cactcaggat gccgatgccg ccgattatgc cgacgtcggt ttccccgccg
     1021 atcatggctg cggcagcagt gctggcggag cgcatgagca ccagatcgaa ttcgagatta
     1081 tgcttgcgaa agatgccggc gtcgcgggcg atccagggca aggattggga aattgcgatg
     1141 gctgagtgga tgccgatgag cttgtcggcg ccggcatctt tgtgcaatgg cacgacgatg
     1201 agcaggaaac caagaacggc gattctgtgg actcgcatag gccagggctc ccgtcgctgg
     1261 tttcagatag cgcacgctta ctcttccgtt gcactggcgt caatcgaatt ctagcggttt
     1321 ccgagttccc cttttaaaaa atttgatcat gggagacatc tcattggcag gacacagagc
     1381 tgacgaagta aatcgctaga gatgaccgat tccccctttt ggaaaagggg gattaagggg
     1441 gatttgattg tggtgtgggg cggttttttc gcagcggatc ggctatcgac tgcgacgtta
     1501 aagccgcatg aaagaaaata aatctcccct gcccttcttt tccaaagagg ggtaacggag
     1561 aagtcgccac gacttgagcg gctaaccaaa tttcattgtg tctcccacgc ccgccgtgtc
     1621 caaccgaggc ttatgggtaa cgatgagttc tcagagaaga ggcagtaatt agcgcttgta
     1681 ccagttctcg aatatgatgc agcgacttcg gccggatggg tggtgctgaa tgatgaaact
     1741 tcgatggatt tcgttcttga tgttgctgct ttgctcgccg ttgactgcgc tagctgccgc
     1801 tgccgcgccg ttgcgcgtca atatcggcgc ggcgtctgtg agcagcagca tgctcagtct
     1861 gtgggcggcg caggagcagg ggctgttcgc caagcatggc attgacgcgc agctgatctt
     1921 gattcgtggc ggctcgactc tggtggcgag cttggtcacc ggcgagattc agctggcgtt
     1981 tacctccggc gtgtcggtgc tcggcgcggc ggcgcagggc atcgatgtga agatgctgac
     2041 ttctatttcg agccgggtga gttggaagct cgtcgccaat ccgcagatta aaaccgccgc
     2101 cgagctgcgc ggcaagcgct ttggcgtgca aagcatcgtc ggcagcacct ggatgtacgc
     2161 gatgctggcg ctggagcagt tgggattaga accgaagcgc gacaacattt cctttctgcc
     2221 catcggcgat gccgtgacca tcggtcattc acttgaagcc ggccgtatcg acgccgcggt
     2281 gctcgacccg ccgctcagcc ggcggctcac cggcaaaggc ttttcccagt tggtcgatct
     2341 cgccaagacc aatgcaagtt tccctggctt gggcgtcggc gtgacgcgga attatctcga
     2401 tcagcagccg acgacgcttg aaaaagttgt tacggccttg acggaagggc tggcgttcgc
     2461 tcagttgccg gccaacaagc cggttgtcct gaaaatactc atgaaacact tgcgtgtcac
     2521 cgactcggtc gtcgccgaag atggctacca agatcatctg tccacgctca accgcaagcc
     2581 ttatccctcg ctcgacggtc tgcgcagcgc gcaaagattg atggcgcagc agaatccgaa
     2641 gatcgcgacg ctcaaggtgg aagatttggt tgacgcgcgg tttgtccgaa agctggacga
     2701 gagtggattc atcgaccggc tgtacaccgc gcagcgctga tcgcgctgta aagcttggat
     2761 tcgaa
//
LOCUS       DATIRS010000327         1610 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_911253, whole genome shotgun sequence.
ACCESSION   DATIRS010000327 DATIRS010000000
VERSION     DATIRS010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1610)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1610)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1610
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_911253"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            137..1411
                     /locus_tag="VLM90_04045"
     CDS             137..1411
                     /locus_tag="VLM90_04045"
                     /inference="COORDINATES: protein motif:HMM:NF020896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050485 - oxidoreductase activity, acting
                     on X-H and Y-H to form an X-Y bond, with a disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine/sarcosine/betaine reductase component B
                     subunit"
                     /protein_id="HSQ12159.1"
                     /translation="MRLELGCIQMKDIRFGAKTSIEGGVLTIDRAELTALLQHEPLFE
                     RVEIELAHPGESCRILRVLDVLEPRYRLNGPNFPGALDGNGLVGDGATRALKNVAVVE
                     TDQTAQRSRSLIDMSGPAADYSPIANTHNVVMLPFPKKDVDKNDYRLAVKKAGLKTAA
                     YLAAAAKGLTPDATQVYELPPVAASQGPTELPRIAYILPMHSHQHPTQQKETVFYGSN
                     IQGFMPTVVHPNEILDGALMFSYSAFTWFAQNHPVILELYRRHGKDLWFAGVVLTVAP
                     AVVSEKERNAFLNARLAKEVLNADGILSTKIGGGAVDTDLMMTYTRAEEMGMKAALII
                     MERYPDTGITFVPENVNALVTPGLTRDPITLPAVSRVIGGETLHLDNSNPDNTNPGLP
                     PLPAKQEITVWMGDLVGAISQTGASRLTTYMS"
BASE COUNT          345 a          503 c          445 g          317 t
ORIGIN      
        1 tccccctcct gtatcctccc ccgtgacacg gggtaggacc agaggtgggg gcttgatcga
       61 tttgaacggc ttgaaccttt tgaacctccg cgccaaagac gttgagtcac gcgccggtca
      121 gcgatataag cgacccatgc gcttggaact cggctgcatt cagatgaagg atatccgttt
      181 cggtgcgaag acgtcgattg aaggcggcgt gctaacgatt gaccgtgctg aactcactgc
      241 gctgctgcaa cacgagccgc ttttcgaacg ggtcgaaatc gagcttgcac atcctggcga
      301 atcttgccgc atcctgcgcg tgctcgacgt gctcgaaccg cgctatcgtt tgaacggtcc
      361 caactttccc ggcgccctcg acggcaacgg attggtcggc gacggcgcga cgcgcgcgtt
      421 gaaaaatgtc gcggtggtcg aaaccgatca gacggcgcag cgctcacgca gcttgatcga
      481 catgagcggc ccggcggcgg actattcgcc catcgccaat acccacaacg tcgtcatgct
      541 gccttttccg aaaaaggacg tcgataaaaa tgactatcgt ttagccgtca aaaaagccgg
      601 acttaaaacc gccgcctatc tcgccgcggc ggcgaaaggc cttacacccg atgccactca
      661 ggtctacgaa ctaccgccgg tggcggcgag tcaagggccg acggagctgc cgcgcatcgc
      721 ctacatttta ccgatgcact cgcaccagca tccgacccag cagaaagaaa ccgtctttta
      781 cggcagcaac atccagggct tcatgcccac cgtcgttcat cccaacgaaa tcctcgacgg
      841 cgcgctgatg ttttcctact cggcgtttac ctggtttgcg cagaatcatc cggtgatcct
      901 ggagctctac cgccgccatg gcaaagatct ctggttcgcc ggcgtcgtcc tcaccgtcgc
      961 acccgccgtg gtgtctgaaa aggaacgcaa cgcttttctc aatgcccggc tggcgaaaga
     1021 agtcttgaac gccgacggca tcctctccac caagatcggc ggcggcgccg tcgacaccga
     1081 cttgatgatg acttacacgc gcgccgaaga gatgggcatg aaggccgcgc tgatcatcat
     1141 ggaacgctac cccgacaccg gcatcacttt cgtgccggag aatgtgaatg ccttggtcac
     1201 cccgggactg acccgtgacc cgatcacgct gcctgccgtt agccgcgtca ttggcggcga
     1261 gacgctgcac ctggataatt cgaatccgga caataccaac ccgggcctgc cgccgttgcc
     1321 ggcaaagcaa gagatcaccg tctggatggg cgacctggtc ggcgccatca gccaaaccgg
     1381 cgcgtcgcgg cttacgacgt atatgagttg agttaagatt cggaatgttc ccccgcaaag
     1441 catgtcctga gcgatgtcga aggagcgcaa agacgccaag gtgacgggcc gatgcccgtc
     1501 atcccgagtg aacgcgaggg atctagattt ctcccttcgg tcgaaatgac gcagaatccg
     1561 aacttcgcgc cattgcgaga catattccga attctttttt tgcgaacttt
//
LOCUS       DATIRS010000328         2433 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_223054, whole genome shotgun sequence.
ACCESSION   DATIRS010000328 DATIRS010000000
VERSION     DATIRS010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2433)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2433)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2433
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_223054"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            18..584
                     /locus_tag="VLM90_04050"
     CDS             18..584
                     /locus_tag="VLM90_04050"
                     /inference="COORDINATES: protein motif:HMM:TIGR01918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:351..353,aa:Sec)
                     /transl_table=11
                     /product="glycine/betaine/sarcosine/D-proline family
                     reductase selenoprotein B"
                     /protein_id="HSQ12160.1"
                     /translation="MPKGNPDKIQGSAATRWGSYSIKDCQDLNGADYEISHGGYDPQF
                     VRQDPDRLVPLDVMRDLEREGVIGQLHEEFISTSGLSNPLSNTRRMGREMAAKAKELG
                     IDAIILTSTUGTSTRSGAAITTELEKAGIPTVQITAALPVAKMVGANRLVLGNGIVHV
                     VGDAKVSPADEKKLRRKLVEQALAAMQK"
     gene            822..1958
                     /locus_tag="VLM90_04055"
     CDS             822..1958
                     /locus_tag="VLM90_04055"
                     /inference="COORDINATES: protein motif:HMM:NF012876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HSQ12161.1"
                     /translation="MKRRLVGPTVVILLFSFLLLQHYLLRDKGWSVIDVLGKVMTVLG
                     VIFTPPGEVGIFFHEHLALPMVVLGAALVVLWLFITGARRAMLQATQTAESSVWVIPA
                     VDAPILADEPGPPPELSWSVQSFRYNCLRSKLIVSFIAIGLFVAIAASSITYSYLYRA
                     AERSVRVRAGIAAMAVNATTVWHVDGQRYQELREELAKVISRPAVAYAYVEDEVGKLI
                     AHAPKDMPNHLSRRPSLEARLMTAEQLVRYRSEIVYDYAQRSGLNDQFVVHLGIWHDS
                     VAAETWAVLGPVLLLALVVVACAAWVFIILLRDPHRSLLALVEQSERIGRGDFSASVG
                     TKRVDELGDLARSMERMRSSLRAVLARIGTAPSGTEQDRQRQSL"
     gene            complement(2074..>2433)
                     /locus_tag="VLM90_04060"
     CDS             complement(2074..>2433)
                     /locus_tag="VLM90_04060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12162.1"
                     /translation="PYSKPALSDKSFVDRALSRYDFPAKYSGTDGNTKQRTGAQLMAP
                     AKLLSRFIIGMFLAPFAFNAADLLHAAAADDAIRAALSVTDHPKAASANPKEFYDNRF
                     LQELESSGFVKEVYAGK"
BASE COUNT          449 a          653 c          774 g          557 t
ORIGIN      
        1 tcaccgacgg tgggctggtg ccgaagggca acccggataa gatccagggc tcggcggcga
       61 cgcgctgggg cagctacagc atcaaggact gccaggattt gaatggcgcc gattacgaga
      121 tttctcacgg cggctacgat ccgcagtttg tccgccagga cccggaccgg ctggtgccgc
      181 tggacgtcat gcgcgacctc gagcgtgagg gcgtcatcgg tcagttgcac gaagagttta
      241 tttccacttc gggcctgtcc aatccgctgt cgaacacccg gcgcatgggg cgggagatgg
      301 cggccaaggc caaagagctg ggcatcgacg cgatcattct cacttcaact tgagggacca
      361 gcactcgcag cggcgctgcg atcaccacgg agttggaaaa agctggaatc cccacggtac
      421 agattaccgc ggcgctgccg gtggcaaaaa tggtcggcgc caaccggttg gttctaggca
      481 atggcatcgt ccatgtcgtc ggtgatgcca aggtatcgcc agcggacgag aagaaactgc
      541 ggcgtaagtt ggtagaacag gcgctggcgg cgatgcaaaa gtgataatcg ccaggtctcg
      601 tccgtttact gtcctatttc ctccgctcaa cgcgcgttcg cggcagctgc ttatagtgcg
      661 cgtgcggata agcgccgctt gcgttggcac ttgttttgcg tttgctggtt agggctttat
      721 tatgttcggt gaacatgatc agtatgccgg gtaagggctg ctgattgtta cgctaattgg
      781 gtggcaaggt taatgccgag tcatttggac acagattgta tatgaaacgc aggctggtcg
      841 gaccgacggt cgtcatcttg ctgttttcgt ttttgctgtt gcagcattac ctgctccgcg
      901 acaaaggctg gagtgtgatc gacgtgctgg gcaaggtcat gacggtcctg ggcgtgatct
      961 ttaccccgcc aggcgaggtt ggcatatttt ttcacgagca tttggcgctg ccgatggtgg
     1021 tgttgggcgc ggcactcgtg gtgctgtggc tgtttatcac cggcgccaga cgggcgatgc
     1081 tccaagcgac gcaaaccgca gagtcgtcgg tttgggtgat tccggccgtc gatgcgccta
     1141 ttttagcgga cgagccggga ccgccgccag aactctcctg gtctgtgcaa tcatttcgct
     1201 acaactgtct gcgcagcaag ctgatcgttt cgtttattgc gatcggcctt tttgtcgcta
     1261 tcgcggcgag ctcgataacc tatagctatc tctaccgcgc ggcggagcgt agcgttagag
     1321 tgcgggcggg catcgccgcg atggcggtca acgccacgac ggtttggcat gtcgacgggc
     1381 agcgatacca ggagctgcgc gaggagttgg ctaaagtcat ttctcgtccc gccgtagcct
     1441 acgcttatgt tgaagacgaa gtaggcaaat tgatcgccca tgcgccgaaa gacatgccca
     1501 atcacttgag tcgccggccg tccctggaag cgcggttgat gaccgcggaa cagctggtgc
     1561 gctaccgcag cgagattgtt tatgactacg ctcagcgcag cgggcttaac gaccaattcg
     1621 ttgtgcacct cggcatctgg cacgactcgg ttgcggcgga gacttgggcg gtcttggggc
     1681 cggtcttatt gctggcgtta gtggttgtag cctgtgcggc ctgggtcttc atcattttgt
     1741 tgcgcgaccc gcatcggtcg ctgcttgcgc tggtagagca gtcggagcgc atcggcaggg
     1801 gcgatttttc cgctagcgtg ggcactaaac gcgtcgacga gttgggagat ttggcccggt
     1861 cgatggaacg catgcgttcg agtttgcgcg cggtcctcgc ccgcattggc accgcgccat
     1921 cggggactga acaggaccgg cagcgtcagt ctttatagtc cgcgcctctt tccgccaccc
     1981 tcgacgactt cgcattcgct ccagcgtcaa agcggcgctg gcgcggctag actcacttcg
     2041 atttctttca cctcacaatc attgcggcgc cggtcatttt ccggcgtaga cttccttgac
     2101 gaagccggaa ctctccagct cttggagaaa gcggttgtcg tagaattcct tgggattggc
     2161 cgaggcagct ttgggatgat cggtcaccga cagcgcggcg cggatggcgt cgtcggccgc
     2221 ggcggcgtga agaagatcgg ccgcattgaa ggcaaatggc gctagaaaca ttccgataat
     2281 gaatctgctc aaaagttttg ctggagccat aagttgtgca cccgtccgct gtttggtgtt
     2341 gccatcggtc cccgagtact tagcaggaaa gtcgtatctc gacaaagctc tgtcgacaaa
     2401 gctcttgtcg gagagtgcag gcttggagta tgg
//
LOCUS       DATIRS010000329         3207 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_223063, whole genome shotgun sequence.
ACCESSION   DATIRS010000329 DATIRS010000000
VERSION     DATIRS010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3207
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_223063"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(148..1113)
                     /locus_tag="VLM90_04065"
     CDS             complement(148..1113)
                     /locus_tag="VLM90_04065"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12163.1"
                     /translation="MKGLTSVMLLFSALVAPIAGFGAAPRSGAGEKVIIGLPTTSMSM
                     LPVFFAHDKGFFREEGIEPQLVFVGGRLQVPALVAGEVDFSASAETVLRAAVQGLPLK
                     VVVYMNSRMAVSLMAAPDIKTIAGLKGRSIAVTSIGGSLDYAAREILAKNGLNPERDA
                     RFIGIAQSEQMLALSAGSIHAAMLTPPFDAMMEKKGFRRLVFVGDVLDYPQGGLATTD
                     KKIQENPAQVKRVVRTMVRSLIRIRQNRDELVGYIAQRWKMAPEFAAASYDTMLKAYS
                     PDGMTSAQSIQSVIDSIKGRNPTVGISQVVNFASLEEVQREMKLK"
     gene            1684..2163
                     /locus_tag="VLM90_04070"
     CDS             1684..2163
                     /locus_tag="VLM90_04070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HSQ12164.1"
                     /translation="MTSIVIETKIRAPIELCFDLARDVDAHSESAAFSSERIVPPGRT
                     EGLLELGDLVAFEGRHFGVKQRFVARITALDRPHRFDDEMVQGSFKWLRHSHEFEFYD
                     GVTTMRDTLEWEPPLGIVGRLVDRLFLRRHMHWFVSTKQNGLKRIAEDRVRTSMNNS"
     gene            2160..2657
                     /locus_tag="VLM90_04075"
     CDS             2160..2657
                     /locus_tag="VLM90_04075"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSQ12165.1"
                     /translation="MIQLEQIGPTSAPVFKNIRLRALQDSPTAFSSTYAEEFKLTDAD
                     WLTRASQWGGVNSVAYLAMDAGNAVGIAAGVRDRNDLQRADLMSMWVAPAQRRLGIGR
                     MLVDAVAAWARAQDMLYLCLMVTSNNDHAMQFYQSLGFALTGRNEPYRNDQALLNFEM
                     HRSLS"
     gene            2724..>3207
                     /locus_tag="VLM90_04080"
     CDS             2724..>3207
                     /locus_tag="VLM90_04080"
                     /inference="COORDINATES: protein motif:HMM:NF021788.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12166.1"
                     /translation="MPGYSVETSTYRIGAEDYRIRSLCNRRQYWDPDGRAERAGISSA
                     TWPIFGVVWPAGIALAQEMSHLTFAGLKILEVGCGIGLSSLVLQRQGADITATDYHPL
                     AEEFLRFNSDLNDLPPIKFHNAPWAGPNPDLGRFGLYGASMFESLSGGLGTAAFLAFL
                     M"
BASE COUNT          672 a          993 c          882 g          660 t
ORIGIN      
        1 ccgacccgga ctttcaggcg caagcaaaat agcgaagact ggaaatcgat ccggtcggcg
       61 gcgaagagct ggcaactctc gcccgcgaag tcatcgctca accgaaggaa gtcgtcgagc
      121 ggatgaagcg attgctcgag aaataattta cttgagtttc atttcgcgct gcacctcttc
      181 gagagatgcg aagttgacca cctgggagat accgacggtg ggattgcgcc ctttgatcga
      241 gtcgatcacg ctttggatcg actgcgcgct tgtcatgccg tccgggctgt acgctttgag
      301 catggtgtca tagctggccg cggcaaactc cggcgccatt ttccagcgtt gcgcgatgta
      361 gccaaccaac tcgtcgcgat tttgccggat ccggatcagc gaccgcacca tcgtccgcac
      421 gacacgcttc acctgcgcgg gattttcctg aattttcttg tcggtggtcg ccagaccgcc
      481 ctgtgggtag tcgagaacat cgccgacgaa taccaggcgc ctgaagcctt tcttttccat
      541 catcgcatcg aagggcggag tcagcatggc ggcatgaatc gagccggccg ataaagcgag
      601 catctgctcg ctctgcgcga tgccgataaa gcgcgcgtct ctttccggat tgagcccgtt
      661 cttcgccaag atttcccgcg cggcatagtc caaactaccg ccgatagagg tgacggcgat
      721 ggagcgtcct ttcaagccgg cgatggtttt aatatccggc gcagccatca aggaaacggc
      781 catccgcgaa ttcatataaa cgacaacttt gagcggcagg ccctgaactg cggcgcgcaa
      841 cacagtttcc gccgacgcgc tgaaatcgac ctcgcccgct accaaagcgg gaacttgcag
      901 ccgtccaccg acaaatacca gctgcggctc gatcccctcc tcccggaaaa atcccttgtc
      961 gtgggcgaaa aacaccggca acatactcat cgacgtggtc ggcagcccaa tgattacctt
     1021 ctcgccggcg ccgctccgtg gcgccgcccc gaaccccgca atcggcgcga ccagcgccga
     1081 gaaaagcaac ataaccgaag tcaatccttt catccgaaac ctccgtcgat cgcgtccgaa
     1141 cgataaagca ctgtccctca gcggcgaaaa taggcgacaa cggcgatccg cgcaaggcca
     1201 tcaggaagga tcgccgattg ggccgcgcag cttatcaaag cgcagtcgtg tcaacatggc
     1261 tgcgatagga tctcttcaat gcaccgccga tcgaaaaata gttccactgg gcaagtcacc
     1321 gcatttcgtt cgggatgacg gcaaaaccaa actgaaccct gtcttgcccg aaccggattc
     1381 cgtagcccga acaggataaa tttgctatgg tttgcccatc caagttgaac cgcgcgatcc
     1441 atggaaatca ctattgtcgc aaccgaccgc tttattcaaa gagccgtcaa gcgttcagtc
     1501 ggctggtcga cgcaaccaag cgcgaattga tggcctgccg cctcattgct ggcaacaacg
     1561 gtccgggcaa acgatttacg gagcgcgatg tccttcagtc cgccaccgtt cccggctttc
     1621 gcaagtccac gcgatcgtta ttggtctaat gcctgctata gcaccgaaga cttcggggaa
     1681 tttgtgactt ccatcgtcat cgaaacaaaa atccgcgcgc ccatcgaact ctgtttcgac
     1741 ctcgcgcgcg acgtagacgc ccacagcgaa tcggcggcgt tttcgtcgga acgcatcgtc
     1801 ccgccggggc gtaccgaagg gttgctcgaa cttggcgacc tggtcgcctt cgaaggccgc
     1861 cactttggcg tcaagcagcg cttcgtcgcg cggatcaccg cgcttgaccg cccgcatcgt
     1921 tttgacgacg aaatggttca aggctctttt aaatggctgc gccactctca cgaattcgag
     1981 ttttacgacg gcgtcaccac catgcgcgac acactcgaat gggagccgcc tctcggcatt
     2041 gtcggacgcc ttgtcgaccg cctcttcctg cgccgccaca tgcactggtt cgtatcgacg
     2101 aagcagaatg gccttaaacg aatcgcggag gatcgagtaa gaacttcgat gaacaattca
     2161 tgatccaact tgagcagatc ggtccgacaa gcgcgccggt cttcaaaaac attcgcctgc
     2221 gcgctttgca agactccccc accgcattca gctccaccta cgccgaagaa tttaaactca
     2281 ccgacgccga ttggttgaca cgggcttcgc agtggggcgg cgtcaactcc gtcgcttatc
     2341 tcgcgatgga cgccggcaat gctgttggta ttgcggcggg agttcgcgat cgaaacgatc
     2401 tccagcgcgc tgacctcatg tcgatgtggg tcgcgccggc gcagcgccgt ctgggaattg
     2461 gccgtatgtt agtcgacgcg gtggccgcct gggctcgcgc gcaagatatg ctatacttgt
     2521 gcctgatggt gaccagcaac aacgatcatg ccatgcagtt ttatcagagc ctcggctttg
     2581 ccctcacggg ccgaaacgaa ccctatcgta acgatcaagc gctgctcaat tttgaaatgc
     2641 accgttctct gtcctagcct ccgcgttatc gttgccgcaa ccgccagcgg cgtttctagc
     2701 gaaacgccaa aggagtcatt ggcatgccgg gatactcggt cgagacctcg acctaccgca
     2761 tcggtgcgga ggattatcgg atccgttcgc tttgcaaccg ccggcagtat tgggaccccg
     2821 atggccgggc tgagcgggcc ggcatttcct cggcgacctg gccgatcttc ggcgtggtgt
     2881 ggccggcggg catcgcgctg gcgcaagaga tgagtcattt gacattcgcc ggcttgaaaa
     2941 tcctcgaggt cggttgcggc atcggcttgt cgagtctagt cctgcaacgc cagggcgccg
     3001 acatcacggc aacggattat catcccctgg cggaggaatt tctccgcttc aacagcgacc
     3061 tgaacgacct gccgccgatc aaatttcaca acgccccatg ggccggcccg aatcccgatc
     3121 tcggccgctt cggtctttac ggcgcgtcga tgttcgagtc gctttccggc gggctgggca
     3181 cggcggcgtt tctagcgttc ctaatga
//
LOCUS       DATIRS010000330         2802 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_813147, whole genome shotgun sequence.
ACCESSION   DATIRS010000330 DATIRS010000000
VERSION     DATIRS010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2802
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_813147"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(184..1506)
                     /locus_tag="VLM90_04085"
     CDS             complement(184..1506)
                     /locus_tag="VLM90_04085"
                     /inference="COORDINATES: protein motif:HMM:NF023128.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12167.1"
                     /translation="MDDGRLNQPSQSAERDYQRVVHSWAMYDWANSAFAVVVLTAIFP
                     VHYRALALDAGAAPQTATAYWAYTTSLSLLLVAAIGPVAGAAADLLGAKKRFLALALW
                     LGVLGTASLALLGTGEYLLASLLFAVANLGFAGGNIFYESLLPQVARPEDLDRVSVRG
                     YALGYLGGGLLLVVNALWLYRPQWFWMADRSVALRACFISVAGWWLVFAMPLFRTVAE
                     PMVRGRPPASRAFADSLARLRQTFRQIRRYRELALFLAAFWLYNDGIGTIIKLAAAYG
                     DEIGVDHNDMLGALILTQFIGFPCSIGFGVLAQYWGAKRAIFFGLAVYSVISVAGFFV
                     RSSGEFYALAIMVGVVQGGTQALSRSLFASMVPKSHSAEFFGFFSTGEKVAGIVGPVI
                     FALVGQLTGSSRWGIVSITLLFAAGALLLRRVDVVEGRRVAALVDAST"
     gene            complement(1508..2383)
                     /locus_tag="VLM90_04090"
     CDS             complement(1508..2383)
                     /locus_tag="VLM90_04090"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSQ12168.1"
                     /translation="MYSKILIPLDGSKFAEAVLPYARVLARQLSIAVDVLYVHDPQEP
                     PAFAPFMANQYLPRIGESFGGAVGSIVETGHTAATIVEVAAAQPESLIAMATHGYSGA
                     KRWLLGSVAEKVLRAAANHILLVRPANGEPRAEAKLTTVLVPLDGSKLAETVLPTVSE
                     LALRLTLRVELVRVTRRIYSAPPEAFLPVFGANAPNLKKLWEEARAETNGYLIDKADQ
                     LRRQGLTRVESVVLESGADGAAAAIVDLVHKTPESLVALCTLGESGVGNWPLGSVTER
                     VVRYTSGPVLVIRPR"
     gene            complement(2597..>2802)
                     /locus_tag="VLM90_04095"
     CDS             complement(2597..>2802)
                     /locus_tag="VLM90_04095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12169.1"
                     /translation="VANGDGSDNKKINPRIISAVLRVIDAISSSLLNLESNKQQSTYQ
                     RISPVEAVALCKFDINPLNDSQE"
BASE COUNT          636 a          870 c          793 g          503 t
ORIGIN      
        1 gcggtttgta ggatgtggtg accaaaggga accgcatcgt tggttaagcc gcactccctc
       61 gatgcggttc gcggactcac cgcatcctac gggtttcgcc attttcattt tccgtaggtg
      121 tgcgtaagat catgattcac ttcgtggtga agcaacgccc taaatatgtc agcgaaatcc
      181 aggctaggtt gaggcatcca ccagcgccgc gacccggcgg ccttcgacga catcgaccct
      241 acgcaacaaa agcgcccccg cggcaaacag tagggtgatc gacacgatgc cccagcggct
      301 gctgccggtg agctggccga ccaaagcaaa aatcaccggg ccgacgatac ccgcgacttt
      361 ttccccggtg ctgaaaaagc cgaagaactc ggcgctatgg gattttggca ccatggacgc
      421 aaacaacgag cggctgagcg cctgggtgcc accctgcacc acgccgacca tgatcgccaa
      481 cgcgtaaaat tccccactgc tgcgcacgaa aaaaccagcg acggagatca ccgagtaaac
      541 agcgagcccg aaaaaaattg cccgtttcgc gccccaatac tgcgccagca cgccgaaacc
      601 gatggaacat ggaaatccga tgaattgcgt gagaatgagc gcgccaagca tgtcgttgtg
      661 atcgacgccg atttcgtcgc cataggcggc tgcaagtttg atgatcgtgc cgatgccgtc
      721 gttgtagagc caaaatgccg cgaggaacag cgccagttcg cggtagcggc gaatctgtct
      781 gaaggtttgc cgcaaacgcg ccaagctatc ggcgaacgca cgagacgccg gcggtcgacc
      841 gcgaaccata ggttccgcca cggtgcgaaa tagcggcata gcgaaaacca accaccaacc
      901 agccacgctg ataaaacagg cgcgcagggc gacgcttcga tccgccatcc agaaccattg
      961 cggccgatag agccacagcg cattgacgac cagcagcagt ccgccgccaa gataaccgag
     1021 agcatagccg cgcaccgaga cccgatccaa atcctccggc cgcgccactt ggggcaacag
     1081 cgactcataa aatatattgc cgccggcaaa gccgaggttg gcgaccgcga acaggagtga
     1141 agcgagtaga tattcgccag tgccgagcaa cgccaggctc gccgtgccga gaacaccgag
     1201 ccataatgcc agcgccagga agcgcttctt agcgccgaga agatccgccg ccgcgccggc
     1261 caccggaccg atcgccgcga ccaatagcag cgacagcgac gtcgtgtaag cccagtacgc
     1321 cgtggcggtt tgcggcgccg cgccggcgtc cagcgcgagc gcacgatagt ggactggaaa
     1381 gatcgccgtg aggaccacga cggcaaacgc ggagttcgcc caatcgtaca tcgcccagct
     1441 atgcacgacc cgctgataat cccgttcggc gctctgcgac ggctggttca gtctaccatc
     1501 gtccatatca gcgcggccgg atcaccagca ccggtccact cgtgtaacgc acgacccgtt
     1561 cggtcacgct acccaacggc cagttgccga ctcccgactc gcccaacgtg cacagggcaa
     1621 ccaggctttc gggagtcttg tggacgagat cgacgatcgc tgccgcagcg ccgtcggcgc
     1681 cgctttccag caccaccgac tcgacccggg ttagcccttg ccggcgcagt tggtccgctt
     1741 tatcgatcaa gtatccattg gtctcggcgc gcgcctcttc ccagagtttt ttgagattgg
     1801 gcgcattggc gccgaacacc ggcaggaagg cttccggcgg cgcgctgtag atacgcctgg
     1861 tgacgcggac caattcgact cggagagtca agcgcaaagc caattcgcta accgtcggca
     1921 ataccgtctc ggcgagcttg gaaccgtcga gcggaaccag aacggtggtc aacttcgcct
     1981 ccgcacgcgg ctcgccgttc gctgggcgca ccagcagaat gtgatttgcc gccgcgcgca
     2041 gcactttttc ggcgacgctg cccaacagcc agcgcttggc accggaataa ccatgagtcg
     2101 ccatggcgat cagcgactcc ggctgtgccg ccgccacttc gacaatcgtc gccgccgtat
     2161 ggccggtttc gactatcgag ccgacggcgc cgccgaaaga ctcgccgatg cgtggcaaat
     2221 attggttggc catgaatggc gcgaacgcgg gcggctcctg cggatcgtgc acgtacaaaa
     2281 cgtccacggc gatactgagt tgccgggcga gcacgcgcgc atagggcaac acagcttcgg
     2341 cgaatttcga accatcgagc ggtatcaaga tcttgctata catagcccct catcgtctaa
     2401 tcaatcgttt ggacctggat tcgctcaaga tactgaaatt tcgacgcgat tccatccatg
     2461 acaaacatca gagcgataac cgtgccggca acccgcgact gtaatacgac gcgagaattt
     2521 gctttggcgg caaagaaagc cagccaattg agggtttttc gtctgtaccc gtgggccgca
     2581 gagcttatcg ataatttcat tcttgcgaat cgttaagcgg gtttatgtca aatttgcaaa
     2641 gcgcgacagc ctccaccggt gaaattctct ggtatgtcga ttgctgctta ttcgattcga
     2701 gattaaggag acttgacgat atggcatcaa tcacccgcaa aacggcggaa attattctcg
     2761 ggttgatttt cttgttgtcg ctgccgtcgc cgttggcaac ag
//
LOCUS       DATIRS010000331         7156 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1599859, whole genome shotgun sequence.
ACCESSION   DATIRS010000331 DATIRS010000000
VERSION     DATIRS010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 7156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7156
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1599859"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1008
                     /locus_tag="VLM90_04100"
     CDS             <1..1008
                     /locus_tag="VLM90_04100"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HSQ12170.1"
                     /translation="RTDLALIKIRRSGGNLPFAKLGNSSQLDVGDWVMAIGNPFGLEH
                     TVTAGIISAKGRVIGAGPYDNFIQTDASINPGNSGGPLISADGEVIGVNTAIFSQSGG
                     NVGIGFAIPIDLAKKVLDQLRKNGKVVRGWLGVRAQDLSATHAASLGVTRTAADLAIV
                     TEVADKSPAAEAGIKTGDVIVEFNGKAVPKSNEFPGVIADIAPGQKVSLKILREKKEQ
                     TVAVRIGELGDEADVNQQAEARDAELGLRVQRITPEAARRLGLSSAKGVLVVEVQPGS
                     PADLVGIEPADVIREVNQRAVANVKDFERATRQGRRGDRILLLVQRGDNAVFFAVKRK
                     A"
     gene            1017..1208
                     /locus_tag="VLM90_04105"
     CDS             1017..1208
                     /locus_tag="VLM90_04105"
                     /inference="COORDINATES: protein motif:HMM:NF011430.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HSQ12171.1"
                     /translation="MFGLGVPELMVILVIALVIFGPSKLPQIGSGLGKAIRDFKKGVT
                     EKDDEAEKEVKKDPKDLPR"
     gene            complement(1387..2043)
                     /locus_tag="VLM90_04110"
     CDS             complement(1387..2043)
                     /locus_tag="VLM90_04110"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSQ12172.1"
                     /translation="MAENEAHESKLYGEFAPLYDKIFGKIFYSRLERVIDDLGIPPGA
                     QVLEVGAGTGTSFPAYPTHCNVTGIDLAPDMLARARQKIVDNGWRHLKVIEMNALDLK
                     FPDNSFDYVMAFHVVTVVPDPVRMIAEVKRVCKPSGKIVIVNHFTSDVPVLGTLTRSM
                     DPLTRWLGWRTDLQLKPFIATTGLIIEKVYKINKTSLYTVVLARKHSNSNGHYVAREL
                     "
     gene            complement(2073..2267)
                     /locus_tag="VLM90_04115"
     CDS             complement(2073..2267)
                     /locus_tag="VLM90_04115"
                     /inference="COORDINATES: protein motif:HMM:NF024139.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSQ12173.1"
                     /translation="MVDREEELLNSKQVAVILDMSPDTVNEFARKNILPAFKKGKQWR
                     FRKRDISIFYKKQPKDIRDA"
     gene            2597..5716
                     /locus_tag="VLM90_04120"
     CDS             2597..5716
                     /locus_tag="VLM90_04120"
                     /inference="COORDINATES: protein motif:HMM:NF024516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA-like C-terminal domain-containing protein"
                     /protein_id="HSQ12174.1"
                     /translation="MKTLLKIGAFIGITAVLFFIVCALAFYHLVRVGEFRSFVIDEIE
                     QNTALKVGLGAADIEIGWVTGIAFRDVAIAMPDSATPEIAAERVTARVALLPLLQRQV
                     IFYEIRLQRPTIALAGDAEGRIPLLEKLMNLPILKRPGEQFSLDLQTIKIRNGAIDYS
                     DGRKRAGLGEWRLRQADVTVERVRGQRLREFMKDLRARPSAESIGAALHFEINSQVEK
                     DHAPMQLKASGRLVFPQEVLDFHQAHWNADVDLVDFPAALIKVQLGAHLPIKSASGHL
                     AQRLHLEGYPEKQLRLKGDIEFRKISVDAPELWLAPLTGVDGRTSFEAEWSREKLTIK
                     RAELRVDDFKFALAGSIGALNSAEPRLSLQLSQLSVPLTTLRRYLPLRIIESPQWEKS
                     LSSIQSGQVELRSAGVNATLGELRRLAQTGIDKQLWFDAELRDVSGSLAARGTLPLRG
                     VHGRVSLQDGRLRVRDLKGAYGDSQLHDVDASYDLTPSGRGGLELAARGDFNLAELRN
                     QLKAEFVSEHTAKIAASIDELDGRSRVDLTVKRAANEPLQFAGKVTLDKARLRYDDYA
                     LSEIKGEIAFSPKEIKGEKIRAQLRGEPVQLQLALNDYGADDGTFDLGVESTGVRAGV
                     ITQILLDQGSLNDPGIIRGAVRYRGALAHKSRRKFTGDLELVNVQLLVKPLLQPLREL
                     NGKIEIDESGIDFHNLKALLVGVPASASGRWRYAEKPPLLFDFAAPNLDVTYLISQID
                     AEASEFYANLQAEGKIALAKGRIRNFEFSDMRTDATIDRRVWRLTNLNARSAGGTIVG
                     GTTIFDRPDSLGIVALPKIQAVPVESFLRWFNITNTDMTGRVNLTGNLETTGNNDAEL
                     KQNINGTFNLRIEDGTINRMRTLVQILNLLDLSRWFTLQLPDLTKQGIRFRAITADFK
                     VTKGIYATENLLVDSNDLRMSGAGKIDVPNDEIDLVVAVRPFAGIESAFNQVPILGRG
                     VAAIMNSFLVGSFSIKGRIEEPAITAMPLGTLSEMFWSVLGIPKSILTLGDTEKKQEP
                     NEPAKTPVK"
     gene            5713..6006
                     /locus_tag="VLM90_04125"
     CDS             5713..6006
                     /locus_tag="VLM90_04125"
                     /inference="COORDINATES: protein motif:HMM:NF017574.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
                     /protein_id="HSQ12175.1"
                     /translation="MTAKLTLYSRKDCCLCDAMKAVIDKVAANLPLEIDEIDVDGSLA
                     LREKFADQVPVLFIDGRKAFKYRVSAKQLAKKLSRKPPKLFTIIAGFLGKGES"
     gene            6003..7004
                     /locus_tag="VLM90_04130"
     CDS             6003..7004
                     /locus_tag="VLM90_04130"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12176.1"
                     /translation="MKVILLPLFLLVFTFAEGRLLPAADRLIGVQSARVMSQSMPWIA
                     EETGIFRKYNLEFPLVYIGTSPLATAAMLGGEAQLMIDGGVGLVRTVVGGNNDLVFIA
                     GIKNHLTQSILAKPEIKRLEDLRGKKIGVTRIGATTHYFALQVFKRRGMEAGRDYAMV
                     QTGGAPEMLAALLSGAIDAGTMSAPWDARAISQGYNYVVYGPDLRIAHVAVSFITRRS
                     FIAQNSPLLGRFMRAMAEAAKILHSDKEIVFKVLSKYLRIGDRKVLDQAYNAEIKSLE
                     PRMELRLEAVQAILDDIAPTDARAKKFKPQELYDRRYLDELDKSGFMDKLWGGAAAK"
BASE COUNT         1559 a         2001 c         2132 g         1464 t
ORIGIN      
        1 cgcaccgatt tggccttgat caagatccgt cgctccggcg gcaatctgcc cttcgctaag
       61 ctcggcaact cgagccaact ggacgtcggc gattgggtga tggcgatcgg caaccccttc
      121 ggtctcgagc ataccgtcac cgcgggcatc atcagcgcca agggtcgggt gatcggcgcc
      181 ggtccctacg acaatttcat tcagaccgat gcctcgatca acccaggcaa cagcggtgga
      241 ccgctgatca gcgccgacgg cgaagtgatc ggcgtcaata ccgcgatctt cagtcagtcc
      301 ggcggcaatg tcggtatcgg attcgcgatt cccatcgatc tggcaaaaaa agtcttggac
      361 cagttgcgca aaaacggcaa agtggtgcgc ggttggctcg gggtgcgcgc ccaggacctt
      421 agcgccaccc acgccgcttc actaggagtc acgcgcaccg ccgccgatct agcgatcgtc
      481 accgaggtgg ccgataagag ccccgcggcc gaagcaggca tcaaaaccgg cgatgtgatc
      541 gtcgagttca atggcaaagc cgtgcccaag agcaacgagt tccccggagt gattgccgat
      601 atcgcgccgg ggcaaaaagt ttcgctcaaa atactgcgcg agaaaaagga gcaaaccgtc
      661 gcggtgcgca tcggcgaact cggcgacgaa gccgatgtca atcagcaggc cgaggcgcgt
      721 gatgccgagc tcggtttgcg ggtgcagcgc attaccccgg aagcggcgcg gcgcttgggt
      781 ttgagttcag ccaaaggggt cttggtggtc gaggtgcagc cgggcagccc ggccgacctg
      841 gtcggcatcg aaccggcgga tgtgattcgc gaggttaacc agcgcgccgt ggccaatgtc
      901 aaagattttg aacgggcgac gcggcaaggc cggcgcggcg accgtatctt gctgcttgta
      961 cagcggggcg ataacgcggt attcttcgcc gtgaagcgta aagcttagga ggattcatgt
     1021 ttggacttgg tgtgccggaa ctgatggtga ttctcgtgat cgctctggtg attttcggtc
     1081 ccagtaagct gccgcagatc ggcagcggac tcggcaaggc gatccgggat ttcaaaaaag
     1141 gcgttaccga aaaagacgac gaagctgaaa aagaagtgaa gaaggatccc aaagacctgc
     1201 cgcgataatt gcccgacttt cccacctcgt gaatgaccgc cagtccacgt ccgataacga
     1261 ttgcatcacc ggtcaccgga gacaattgct aaccgcgttg tttcgattct aggcaaactt
     1321 gtcagtcgat tttgtgggcg cgggccccgt caaatcatcg attggcggcg gccatgcacg
     1381 cttaggctag agttcacgcg cgacatagtg accgttggag ttggagtgtt ttctggccaa
     1441 gaccacggtg tagagggaag tcttgttaat tttataaacc ttttcaatga tcaggccagt
     1501 agttgcgatg aacggtttaa gctggagatc ggtgcgccaa ccgagccagc gggtgagcgg
     1561 gtccatcgat cgagtgagcg tgccgagcac cgggacgtcg ctggtgaagt gattgacgat
     1621 aacaatcttg ccgctcggct tgcagacccg tttgacctca gcaatcatgc gcaccggatc
     1681 gggaaccacg gtgacgacat gaaacgccat gacgtagtcg aagctgttgt cgggaaactt
     1741 gagatcgagg gcgttcatct caatcacttt gagatggcgc cagccgttgt cgacgatttt
     1801 ttgccgcgcg cgcgcgagca tgtccggcgc caagtctatg ccagtaacat tgcaatgagt
     1861 gggataggcg ggaaaagaag tgcccgtgcc cgcgcctact tcgagaacct gggcgcccgg
     1921 aggaatgccg agatcgtcaa tcacccgctc gagccgactg tagaaaatct tgccgaagat
     1981 tttgtcgtag agtggggcga actctccgta tagtttgctc tcatgcgctt cgttttcagc
     2041 catgcgcccc aaccccaatc acccacgtcc tgctaggcat cgcggatatc cttcggttgt
     2101 ttcttgtaga aaattgaaat gtcgcgcttg cgaaatcgcc attgcttgcc ctttttgaag
     2161 gccgggagga tgttttttcg ggcaaattca ttgacagtgt ccggactcat gtcgagaatc
     2221 actgcgactt gtttgctgtt gagcagctct tcttctcgat ccaccataga ctctctcctt
     2281 ggtaaacacc agtaggcgaa aaagatcgtt ttatctaaca agttcatcta gggctgtcaa
     2341 ggcaagatcg gcgccgggca agaatcgccg cggcggtgaa cgatggcaaa actatgcaaa
     2401 ccgataaagc cgcgcaccga tgcgctctat tttgcccttt gcgcgaactc acaatagtaa
     2461 aattgaggac tgcgttggcg ccgcatgacg cttgcgactg cagtgaactt gctttagcat
     2521 tgccatggtt tagcgttccg cgttcccacc taggagagca accgccctaa gcattgaagc
     2581 ccgtctttgt ttacgcatga aaacactcct caagatcggc gcgttcatcg gcattaccgc
     2641 cgtgcttttt ttcattgttt gtgctctggc attttaccat ctggttcgag tcggcgaatt
     2701 ccgcagtttt gtcatcgacg agatcgaaca aaacaccgcg ctcaaggttg gtcttggcgc
     2761 cgcggacatt gaaattggtt gggtcacggg aatagcattt cgcgatgtcg ccatcgctat
     2821 gccggacagc gctacgccgg agatcgccgc cgagcgggtc acggcgcggg ttgcgctgct
     2881 gccgttgctg cagcgtcaag tgatatttta tgaaattcgc ttgcagcggc ccaccatcgc
     2941 cctggccggc gatgccgagg ggcgcatccc attgctcgaa aagctgatga atttgccgat
     3001 actcaaacgc cccggtgagc agttcagtct cgatcttcaa accatcaaga tccgcaacgg
     3061 cgccatcgat tattcggatg ggcgtaagcg tgccggcctg ggcgaatggc gcttacgcca
     3121 agccgatgtc acggtcgaac gcgtgcgcgg ccagcggctg cgcgagttta tgaaagatct
     3181 gcgggcgcgc ccgtcggcgg aatcaatcgg cgcggcgctg catttcgaaa ttaacagcca
     3241 ggtagaaaaa gaccatgcgc cgatgcagct caaggcctct gggcggttgg tgtttccgca
     3301 ggaagttctg gattttcacc aagcgcactg gaacgccgat gtcgatctcg tcgatttccc
     3361 ggcggcgctg atcaaagtcc aactcggcgc ccatttaccg atcaagtcgg cgagcggcca
     3421 tctcgcccag cggctccatc tcgaaggcta tcccgagaag cagctgcggc tcaaaggcga
     3481 tatcgaattc agaaagatct ctgtcgacgc gccggaactg tggctcgcac cgctaaccgg
     3541 cgtggacggc cggaccagct tcgaggcgga gtggagccgg gaaaaattga ccatcaagcg
     3601 cgccgagttg cgcgtcgacg atttcaagtt cgccttggcc ggcagtatcg gcgcgcttaa
     3661 cagcgcggaa ccccggctat cgctgcagct ctcgcagctg tcggtgccgt tgacgacgct
     3721 gcgccgctac ttgccattga gaatcatcga atcgccacag tgggaaaaga gcctgagctc
     3781 gatccagagc gggcaagtgg agcttaggag cgccggtgtt aacgccacac tcggcgaact
     3841 gcgccggttg gcgcagacgg gtatcgacaa acagctctgg ttcgacgccg aattgcgcga
     3901 cgtttccggc agtctcgccg ctcgcggcac gttgccgctg cgcggcgttc atgggcgggt
     3961 gagtttgcaa gacggccggt taagggtgcg cgatctcaag ggcgcctatg gcgattccca
     4021 attgcacgat gtcgatgcca gctatgattt gacgccgagc ggacgcggcg ggctcgagct
     4081 cgcggctcgc ggtgatttca acctggcgga gctgcgtaat cagctgaaag ccgaatttgt
     4141 ttccgagcac accgccaaga tcgccgcttc gattgacgaa ctcgatggcc gcagccgcgt
     4201 cgatttgacc gtgaaacggg ccgctaacga gccgctacaa ttcgccggca aagtcacctt
     4261 ggacaaagcc cggctgcgct acgacgacta tgccttgagc gagatcaaag gggagatcgc
     4321 cttctcaccc aaggagatca agggtgaaaa gatccgcgcg caactgagag gcgagccggt
     4381 gcagctgcaa ttggcgctca atgattacgg cgcggatgac ggcacctttg acctgggcgt
     4441 cgaatccacc ggcgtgcgcg ccggcgtgat cacgcagatc ttgctcgacc agggctcgct
     4501 caacgatccc gggattatcc gcggcgcggt gcgctaccgc ggcgcgctcg ctcacaagag
     4561 cagacgcaag ttcaccggcg atttggagtt ggtcaacgtc cagctgctgg tgaaaccgct
     4621 cttgcagccg ctgcgcgagc tcaacggcaa gatcgagatc gacgagtcgg ggatcgattt
     4681 tcacaatctc aaggcactgc tggtcggggt tccggcaagc gctagcgggc gctggcgcta
     4741 cgccgagaag ccgccgctgc tcttcgactt cgccgcgccc aatttggacg tgacttattt
     4801 gatttcgcaa attgacgccg aggccagcga gttttacgca aatcttcagg ccgagggaaa
     4861 aattgccttg gccaaaggcc ggatcaggaa cttcgagttc agcgacatga ggaccgatgc
     4921 gaccatcgac cggcgggtct ggcgattgac caatctgaac gcgcgctccg ccggcggcac
     4981 catcgtcggc gggacgacga ttttcgaccg gccggatagc ctgggaattg tcgcgctgcc
     5041 aaaaatccaa gccgtgccgg tggaatcgtt tctgcgctgg ttcaatatca ccaataccga
     5101 tatgactggg cgggtgaatc tcaccggcaa tctggagacg accggcaata acgacgctga
     5161 actgaagcaa aacataaacg gcacgttcaa cctgcgcatc gaggacggca cgattaaccg
     5221 gatgcgcact ctcgtgcaaa ttctcaactt gctcgacttg tcgcgctggt ttaccttgca
     5281 gttgcccgat ctgaccaaac aggggattcg ctttcgcgcc atcaccgccg acttcaaagt
     5341 gaccaaaggt atttacgcaa cggaaaattt gctcgtcgac agcaacgact tgcgcatgag
     5401 cggcgccggc aagatcgatg tgccgaacga tgagatcgat ctggtggttg ccgtgcggcc
     5461 cttcgccggc atcgaatcgg cgttcaatca agtgccgatt ttaggccgag gcgtcgccgc
     5521 catcatgaat tccttcctgg tcggcagttt tagcatcaag ggtcgtatcg aagagccggc
     5581 catcacggcg atgccgttag gaactttatc cgaaatgttt tggagcgttc tcggcatccc
     5641 caaaagcata ctcacgctgg gtgataccga gaaaaaacaa gaacctaacg aacctgctaa
     5701 gacaccggtc aaatgacggc caagttgacg ctatattcgc gcaaggattg ttgcctgtgc
     5761 gacgccatga aggcggttat tgataaagtc gcggccaatc tgccgctcga aattgacgag
     5821 atcgacgtcg acggctcgtt ggcgttgcgc gaaaaattcg ccgaccaagt gccggtgctt
     5881 ttcatcgacg gacgcaaggc gttcaagtac cgggtcagcg ctaaacagct ggcaaaaaag
     5941 ctcagccgaa aaccgccaaa actcttcacc attatcgctg gtttcttggg aaagggggaa
     6001 tcatgaaggt aatcttgctg ccattgttcc tgctggtgtt cacgtttgct gagggccgtc
     6061 tgctgccagc ggcggatcgc ttgatcggcg tgcagtcggc aagggtcatg tcgcagtcga
     6121 tgccgtggat cgccgaggaa accggcattt ttcgcaaata caatttggag tttccgctgg
     6181 tctacattgg cacctcgcca ttggcaacgg cggcaatgtt gggcggtgag gcgcagttaa
     6241 tgattgacgg cggcgtcggt ctggtgcgca cggtggtggg cggcaacaac gatctggtat
     6301 tcatcgccgg catcaagaac catttgactc aaagcattct cgccaagccg gaaatcaaac
     6361 ggctggaaga cctgcgcggc aagaagatcg gcgtcacgcg catcggcgcg accacccact
     6421 atttcgcgct ccaagtattc aagcggcgcg gtatggaagc gggacgagac tatgcgatgg
     6481 tgcagactgg cggcgcgccg gagatgttgg cggcgctgct ttccggcgcc atcgacgccg
     6541 gcaccatgtc ggcgccgtgg gacgcccgag cgatctccca aggctacaat tatgttgtct
     6601 acggcccaga tctgcgcatc gcgcatgttg ccgtgtcgtt tatcacgcgc cgatcgttta
     6661 tcgcccagaa ctcaccgctg cttggccgct tcatgcgcgc catggccgag gccgcgaaga
     6721 ttttgcacag cgacaaagaa atagtcttca aagtcctgag caaatacctg cgcatcggcg
     6781 accgcaaagt gctcgaccag gcttacaatg ccgagatcaa atctctcgaa ccgcgcatgg
     6841 agctgcgcct cgaagccgtc caagcgatcc tcgacgacat cgcgcccacc gatgcgcggg
     6901 cgaaaaagtt caaaccgcaa gagctttatg accggcgcta cttggacgaa ttggataaga
     6961 gcgggttcat ggacaagctg tggggtggag ccgcggcgaa atgaacatga gcgctgaaac
     7021 ggacgcgcga gagcttttct acactccatt tgaaccgcta aaaaggtatg tgaggatcgc
     7081 tgagacggcg gcagtttcca accaaccttg ggcagcatca ggacgcttgg attcagttga
     7141 tggggaatgc agtttg
//
LOCUS       DATIRS010000332         4357 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1501589, whole genome shotgun sequence.
ACCESSION   DATIRS010000332 DATIRS010000000
VERSION     DATIRS010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4357)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4357)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4357
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1501589"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(62..2134)
                     /locus_tag="VLM90_04135"
     CDS             complement(62..2134)
                     /locus_tag="VLM90_04135"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HSQ12177.1"
                     /translation="MSSSQVISPTAGQADEDPFLWLEDVGGERALTWVRAHNAASARE
                     LEGTAGFDKLRGRLLAIYESNERIANVTKHGAYFYNFWRDERQVRGVWRRTTLAEYRK
                     AEPAWEIVLDLDRLAASEKENWVWKGADILQPSHDRALLFLSRGGADAAAMREFDLVK
                     KDFVVDGFTLPEAKSRVAWRNRDALYVGTDFGSGSLTSSGYPRIVKEWQRGTALGAAK
                     TVFEGQVEDVSVAASVVHDHVRTYELISRGLTFFTNELWFRRGDDWVRVDKPADARVE
                     TFTDQILLRLRSDWNVGGRTYRAGALLAGDFAAYLRGEREFAVLFEPSERKALASTSQ
                     TKNFLILNELDNVRSKVYALKRADGQWQRQQLATPAFGSVRVRGVDAHSDDDASDDYF
                     MSLTDFLTPSSLILGRVGASAEEKLKSLPAFFSADGLAISQHEAVSKDGTRIPYFQVS
                     RKDLMTNGRSPTLLYGYGGFNVSQLPFYSGTLGAAWLERGGVYVLANIRGGGEFGPNW
                     HYAARKENRQRAYDDFIAVAEDLIARKVTSPQHLGIQGGSNGGLLVGVALTQRPDLFK
                     AVVCQVPLLDMRRYSKLLAGASWVDEYGDPDKIEDWAYIAKYSPYHNVVVERKYPRVL
                     FTTSTRDDRVHPGHARKMFAKMKAQGHDVLYYENIEGGHGGAADNRQLAYMSALTYAF
                     LVKELFAE"
     gene            complement(2381..2752)
                     /locus_tag="VLM90_04140"
     CDS             complement(2381..2752)
                     /locus_tag="VLM90_04140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HSQ12178.1"
                     /translation="MKDGLKPGLTHTQTYETTERMRATQLTADVFSTPAMIGLMEGTC
                     VRLTAPYLDEGENSVGMHVDVHHLAPTKIGQSVTVTAEVLEIDGNKIRYAVSAVNDAG
                     VNIGAGKHRRAVIRPKKLSDG"
     gene            complement(2760..3680)
                     /locus_tag="VLM90_04145"
     CDS             complement(2760..3680)
                     /locus_tag="VLM90_04145"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12179.1"
                     /translation="MPGFLSAQERVKFPVGVGTKTLGTGLIWLATKKGFFEEVGLDVQ
                     PVLLRGTPVAVQALVGESLFMTLGSADAMVSAAVGGADLVSVAGVINGLTQAIVAGKK
                     YKSFKELRGTTVGVQSLASGATTVLKRIFKKHGLDYPADYKLLAVGGGNFNLAALSSG
                     QVAAAFLVVPLVFAAEEQGMNVLGYYKDYYPNYQLTVMAVKRGWAEKNRALLVRFLRA
                     GLRANRWLYANKEAASDFFAKEIPMAPELARKGWDYYTANRVWHPNLELNLDGMKLAL
                     EILAEESKQAAQDAVKFIDGRYLQQALKDL"
     gene            complement(3779..>4357)
                     /locus_tag="VLM90_04150"
     CDS             complement(3779..>4357)
                     /locus_tag="VLM90_04150"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: protein motif:HMM:NF025034.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="retropepsin-like aspartic protease"
                     /protein_id="HSQ12180.1"
                     /translation="GEKWFMVKSRAGNIGWIKSSDSSAARRVDDHFRALPKETFAIGP
                     AVIASSSGPAVTAKTSESGVVTIPFKLHSNAMLVPVSFTNGSSSTTANLVVDTGAGQT
                     VLSKRAARDLGLTALDSQARLGIGGAVRVDVGVVESVKVGGAEQKNLPISIHDFSPDP
                     RIEGLLGFDFLGRFQMSVDNDKQIIVLTPKKD"
BASE COUNT          941 a         1356 c         1156 g          904 t
ORIGIN      
        1 gttgaaaatc ctatttcgaa tctattcgac gattgcggcg ctaacgcgga aattaccctt
       61 ttcactctgc aaacaactcc ttaaccagaa acgcataagt cagggccgac atgtaagcga
      121 gctggcggtt gtccgccgcg ccgccgtgac cgccttcgat attttcatag tacagcacgt
      181 catggccctg tgccttcatc ttggcgaaca ttttacgcgc gtgtcccgga tggacccggt
      241 catcgcgcgt cgaggtggtg aatagcactc gcggatattt cctctcgacc acgacattat
      301 gatagggcga atatttggcg atatacgccc aatcttctat tttgtccgga tcgccatact
      361 catcgaccca actggcgccg gccaataatt tgctatagcg gcgcatatcg agcagcggca
      421 cctggcaaac taccgctttg aataaatccg gccgctgcgt cagcgccaca cccaccagca
      481 aaccgccatt ggagccgccc tggatgccga gatgctgcgg cgaggtcact ttacgcgcga
      541 tcaaatcttc ggcgacagca atgaaatcat cgtaggcgcg ctggcgattc tccttgcgcg
      601 ccgcatagtg ccagttgggc ccgaattcgc cgccgccgcg aatgttcgcc agcacgtaga
      661 cgccgccgcg ctccagccaa gccgcgccga gagtgccgct gtaaaatggc aactgcgaca
      721 cattgaagcc gccatagccg tagagcagcg tcgggcttct gccgttcgtc atcaagtctt
      781 tacggctcac ctgaaagtag ggaatcctgg tgccatcttt cgataccgcc tcatgctggc
      841 taatcgccaa gccatcggcg ctgaaaaatg ccggcaagct ttttagcttt tcctccgccg
      901 acgcgccgac tctgccgaga atcagactcg acggcgtcaa gaagtcggtt aggctcatga
      961 agtaatcgtc cgaggcatca tcatcggaat gggcatcgac gccacgcacg cgcaccgaac
     1021 cgaaagctgg agtcgccaat tgctggcgct gccattgccc gtcggcgcgc ttgagcgcgt
     1081 aaaccttgct gcgcacattg tccagctcgt tgagaatcaa gaaattcttc gtctgactcg
     1141 tgctcgccaa cgctttgcgc tcgctcggtt caaaaagcac cgcgaattcg cgctcgccgc
     1201 gcagataggc tgcaaaatcg ccggcaagca gtgctccggc tcgataagtt ctcccgccaa
     1261 cgttccagtc ggaacgcagc cgcaacaata tttgatcggt aaaggtctcg acccgtgcgt
     1321 cggccggttt atcgactcga acccaatcgt cgccgcggcg aaaccatagc tcattggtga
     1381 aaaatgtcag gccgcgcgaa atcagttcat atgtccggac atggtcatgc accaccgatg
     1441 ccgccacgct gacgtcttca acttggccct cgaaaactgt cttggccgcg cccagcgccg
     1501 tgccacgctg ccattcttta acgatgcgcg gataaccgga actggtcaga gagccggagc
     1561 cgaagtcggt gccgacgtaa agcgcatcac gattgcgcca agccacccgg ctcttcgctt
     1621 ccggcagggt aaatccgtcg acgacgaaat ctttcttgac cagatcgaac tcgcgcatcg
     1681 ccgcggcatc ggcgccgccg cgcgaaagaa atagcagcgc gcgatcatgg cttggctgca
     1741 aaatatcggc gcccttccag acccagttct ctttctctga agccgcgagc cgatcgagat
     1801 cgaggacgat ctcccaggca ggttcggcct tgcgatactc ggccaacgtt gtccgccgcc
     1861 aaaccccgcg cacctgccgc tcatcgcgcc agaagttgta aaaatacgcg ccatgcttgg
     1921 tgacgttggc aatgcgctcg ttggattcgt agatcgccag caaacgcccc cgcaacttgt
     1981 cgaaacccgc agtgccttcc agttcgcgcg cgctcgccgc gttgtgcgcg cgcacccagg
     2041 ttaaagcgcg ttcgccgccg acatcttcga gccacagaaa aggatcttcg tccgcttgcc
     2101 cagcggttgg cgagatgact tgggatgagc tcatagttaa tttcgccaag gaaaagagaa
     2161 ttgcaacgct aacgagaaaa actccgacat gacgcaccac gctttgcata attgaaaata
     2221 ataacgtcag cgcccgacgt gaccgacgct cactctacct gattaattcg atcgccagac
     2281 gataagcaag caagcgggaa cctacggata gcgccgaaaa gtctccgggc gccgcgatcg
     2341 tcggggaatt atgctcgggg tcaacaccat ggcgcgccga ttagccgtca gacagtttct
     2401 tcggccgaat caccgcgcgc cggtgcttac ccgcgccgat attcacgccg gcatcgttga
     2461 ccgcggaaac agcatagcga atcttgttgc cgtcgatctc caagacctcc gccgtgacgg
     2521 ttacgctttg gccgatcttg gtcggcgcca ggtgatgcac gtcgacatgc atgccgacgc
     2581 tgttttcgcc ctcgtccaaa tagggcgcgg ttaaccgcac gcaagttcct tccatcaggc
     2641 caatcatcgc cggcgtcgag aaaacatcgg cggtcaattg cgtagcgcgc atgcgctcgg
     2701 tggtttcgta ggtttgggta tgtgtcagtc cgggtttgag cccatctttc ataaccgtct
     2761 cacaagtcct tgagtgcctg ctgtaaatag cgaccatcga taaacttcac ggcgtcctgt
     2821 gctgcttgtt tgctctcctc ggcaagaatt tccaatgcca gcttcatgcc gtcgaggttg
     2881 agttcgagat tcggatgcca aacccggttc gccgtataat aatcccaacc cttgcgcgcc
     2941 agctccggcg ccattggtat ttccttagcg aagaaatcac tcgccgcctc tttgttggca
     3001 tacagccaac ggttagcacg caaaccagcg cgcaggaagc gcaccaacag cgcgcggttt
     3061 ttctccgccc agccgcgctt caccgccatc acggtcaact gatagttggg atagtagtct
     3121 ttatagtagc cgagcacgtt catgccctgc tcttcagcgg cgaaaaccaa tggcacgacg
     3181 agaaatgccg ccgcgacttg accggaactg agcgccgcga gattgaaatt acccccgccc
     3241 accgccaaga gtttgtaatc ggcgggataa tccaggccgt gcttcttgaa gatgcgcttg
     3301 agcaccgtgg tcgcgcccga ggcgagcgac tgcacgccaa cggtcgtgcc gcgcagttct
     3361 ttgaagcttt tatatttctt gccggcgaca atggcttggg tcaaaccgtt aatgacaccg
     3421 gcgacactca cgagatcggc accgcccact gccgcgctga ccatcgcgtc ggcggaaccc
     3481 agcgtcatga aaagcgactc gccaaccagc gcctgcaccg ccaccggcgt accgcgcaac
     3541 agcaccggct ggacatcgag gccgacttct tcgaaaaagc ctttcttagt ggcgagccag
     3601 atcaggccgg tgccgagggt tttggtgccg acgccgacgg ggaacttgac gcgctcctga
     3661 gcgctgagaa atcccggcac gagaaatatg aaaatcgaac tgcctatcag ggcgagagac
     3721 caataaatcc gcgttacgtg ttttggcttc acccctgggc cacccgctta gccatgagct
     3781 agtctttttt tggcgttaac acgattattt gcttgtcgtt gtccaccgac atttgaaagc
     3841 ggccgagaaa atcgaagccc aatagacctt caatgcgggg atcaggcgaa aaatcatgga
     3901 tactaatggg caagttcttc tgttcagcgc caccgacctt caccgactcg acgacaccga
     3961 cgtcgactct caccgcacca cctataccaa gtctcgcttg actgtcgagg gccgtcaatc
     4021 caaggtcgcg ggcggctcgc ttcgatagca ccgtctggcc ggcgccggta tcgaccacca
     4081 ggttagccgt cgtcgagcta ctgccgttgg taaaactgac cggcactagc atggcattac
     4141 tgtggagctt gaatggaatt gtgactacgc cgctctccga ggtcttcgcc gtgaccgcgg
     4201 gcccactaga gctcgcaata accgccggtc cgattgcaaa ggtttctttc ggcagagcgc
     4261 ggaaatgatc gtcgacccgc ctggctgcgg agctgtcgct cgacttgatc caaccgatgt
     4321 ttcccgcccg gctcttgacc atgaaccatt tctcgcc
//
LOCUS       DATIRS010000333         2688 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1796681, whole genome shotgun sequence.
ACCESSION   DATIRS010000333 DATIRS010000000
VERSION     DATIRS010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2688
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1796681"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(84..473)
                     /locus_tag="VLM90_04155"
     CDS             complement(84..473)
                     /locus_tag="VLM90_04155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12181.1"
                     /translation="MLSAVYLLLGGILLLVTLGRVVVRGGGRGTDWALETAFIRLDFP
                     PEHRAVAQQLATGLAEVVGMKIKQLTPNHNLAQIADWADDRIYAKDLITLFVVAFNVR
                     CDSNTTFRALVEKVAEKKVTDGKKTSV"
     gene            complement(550..1191)
                     /locus_tag="VLM90_04160"
     CDS             complement(550..1191)
                     /locus_tag="VLM90_04160"
                     /inference="COORDINATES: protein motif:HMM:NF016207.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding negative transcriptional regulator"
                     /protein_id="HSQ12182.1"
                     /translation="MYLPGYFEETRTEVLHPFMHERPLATLVTLAAAGLNANHLPFEL
                     DSEPLPNGTLRCHVARANPVWRDYSRDTEALVIFHGPQVYISPSWYETKKQSGEVVPT
                     YNYAVVHAYGALRIIDDRAWLRGLVTRLTERFESASSAPWRVSDAPEDFIDKQLGAIV
                     GIEITISKLAGKWKVSQNRPALDRAGVVEALSETASADSLAIAQMIKAGFKSA"
     gene            1371..2420
                     /locus_tag="VLM90_04165"
     CDS             1371..2420
                     /locus_tag="VLM90_04165"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ12183.1"
                     /translation="MIQRDKMIWTGLMLMWAAAWPSQALHAQESFFKGKQIRIVVGLS
                     TGGGYDRAARLVSRYLGRYIPGNPDFAVQNMPGAGSVTAANYVWGVAKPDGLTLLAPH
                     NNFYLAQLSGQKEVKFDLTKFQWIGSLENDDMIMFARADAPFRSVADIIRSKEPPKCG
                     STGVGSSDYVMSKILEETVGMKVGHVTGYPGSSEIALAMERGEVACMGLTIATYYGRE
                     PFLGWLKTKFVRFLAQSGHKRSPRIPDAPTIYELMDEYKTAATKRRVAEAMLQGGEWA
                     RPLIAPPATPSDRVKILRDGYEKASKDPELLAEAKKLSIEIAPLRGEQLQKTAVDIIK
                     QPAEVTEQIKKLFVQ"
BASE COUNT          600 a          795 c          741 g          552 t
ORIGIN      
        1 cgcctcgccg gcaagtaaac gctgccaaca tcagattctc cgttcgcagc ctcatgaaca
       61 gccaaagttt gcccaacatt ccattacacc gacgtcttct tgccatctgt cactttcttc
      121 tcggcgacct tctccaccag ggcgcgaaag gtggtgttcg aatcgcatcg gacgttaaaa
      181 gcgacaacga acagtgtgat cagatccttg gcgtagatcc ggtcatcggc ccaatcagcg
      241 atttgagcta aattatggtt cggcgttaac tgcttgatct tcatgccgac gacttcagcg
      301 aggccggtgg caagttgctg cgccacggct ctatgttcag gcgggaagtc gagacggatg
      361 aacgcggttt cgagagccca gtccgttcct ctgccgccgc cgcggacgac cacccggccc
      421 aaggtgacaa gtaataggat tccgccaagg agtaagtaaa ccgccgagag catcgaagtt
      481 gtaacctggt tgccatgact ttaccgcgct accatcggcg ctgcaaagcc tcgcatggtt
      541 tgtcagaggt tacgccgact tgaaaccggc tttaatcatt tgcgcgatgg ccaaactgtc
      601 ggcgctggcg gtttcactca aggcttcgac gacaccggcg cgatccagcg ccgggcgatt
      661 ttggctgacc ttccatttgc cagccaattt tgaaatcgtt atctcaatgc caacgatggc
      721 gcccaactgt ttgtcgataa aatcctccgg cgcatcgctc actcgccagg gggccgagct
      781 ggcgctttcg aagcgctcgg tcaaacgcgt caccaagccg cgcagccacg cgcggtcgtc
      841 aattattcgc agcgcgccat aggcgtggac gacggcatag ttataggtcg gcacgacttc
      901 gccgctctgt ttcttggtct cataccaaga cggcgaaatg taaacctgcg gcccatgaaa
      961 aatcaccaac gcttcggtgt cgcgggaata gtcgcgccat accggattgg cccgggcgac
     1021 atgacagcgt agcgtaccgt tgggcagcgg ctcgctgtcg agttcgaagg gcagatgatt
     1081 ggcgttgagt cccgcggccg ccaatgtcac cagcgtcgcc agcggccgct cgtgcatgaa
     1141 cgggtgcaag acttctgtgc gagtctcttc aaagtaaccg ggtaagtaca ttcaaatctt
     1201 tcatactggc ttggcttgag taaattgcgg cgctaagatc gagcgtgatc tgaatatcgc
     1261 ccggcgatca atccgctgtc aagcagagct gcagttcatg gttgcattgc acgcccgaca
     1321 ctttatattt gcagcgcgag agatcttgtc aaaaacgcgg aggagaaatg atgatacaac
     1381 gcgacaaaat gatctggacc ggcctgatgc tcatgtgggc cgcggcgtgg ccgtcacaag
     1441 ccctgcacgc ccaggagtcg ttcttcaaag gcaaacagat ccgcatcgtc gtcggcctca
     1501 gcaccggtgg cggctacgat cgcgccgccc gtttagtttc ccggtacctg ggcaggtaca
     1561 tccccggcaa tcccgatttc gcggtgcaaa acatgcctgg cgccggttcg gtaaccgccg
     1621 ccaattatgt ctggggagtg gccaaaccgg atggactgac tttgttggcg ccgcacaata
     1681 atttttatct ggcccagctt tccggccaga aggaagtaaa gttcgacctg accaaatttc
     1741 agtggatcgg ctccctggag aacgacgaca tgatcatgtt tgcccgcgcc gacgcgccgt
     1801 tcagatccgt cgccgacatc attcgctcga aagagccgcc caaatgcggc tctaccggcg
     1861 tcggcagttc ggattacgtc atgtcgaaga tcctcgaaga aaccgtcggc atgaaggtcg
     1921 gccatgtcac gggctatccc ggcagcagcg agatcgccct ggccatggag cgcggcgagg
     1981 tcgcctgcat gggattgacg atcgccacgt actacggccg cgagccattt ttaggctggc
     2041 tcaagaccaa gttcgtccgt ttcctcgccc agagcggcca caagcgttcg ccgcgcatcc
     2101 ccgatgcgcc gacgatctac gaattgatgg acgaatacaa aactgccgcg accaagcggc
     2161 gcgtcgccga ggcgatgctc caaggcggcg agtgggcaag gccgctgatc gcccctccgg
     2221 ccaccccgtc cgaccgcgtc aaaatcctgc gcgacggcta cgaaaaagct tcgaaagacc
     2281 cggaattact cgctgaagcg aaaaagcttt ccatcgaaat cgcgcccctg cgcggcgaac
     2341 aattgcagaa aactgccgtt gacatcatca agcaaccggc ggaagtgacc gaacagatca
     2401 agaaattgtt cgttcaataa tgcggcggtt gggaattgtt aagcctaaac ccgcttagct
     2461 gcaagaaccg agggattttg aatatattga ctggaagttc gctctgattt ccgtcattcc
     2521 ggcgcaggcc ggaatccaga cccaacaacc acctggatac cgttcttcaa cggtatgaca
     2581 gctgctgccg gtcgcctgaa tgccagtttt cacgggcatg cagactactt cgtcaaaagc
     2641 aaatcaaccg ggcatttcgc gatcggggta tgaaccccgc tcgcgacc
//
LOCUS       DATIRS010000334         2129 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1010353, whole genome shotgun sequence.
ACCESSION   DATIRS010000334 DATIRS010000000
VERSION     DATIRS010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2129)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2129)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2129
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1010353"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(334..1965)
                     /locus_tag="VLM90_04170"
     CDS             complement(334..1965)
                     /locus_tag="VLM90_04170"
                     /inference="COORDINATES: protein motif:HMM:NF015853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein CcmH"
                     /protein_id="HSQ12184.1"
                     /translation="MSYFKLSVVCVFLLLASSPLHAAATADIDDRTREIATELRCVVC
                     QNLSVADSPSEMAQQMRAIVREQVQAGKTTDEIKDFFVSKYGEWVLLRPKTTGFSALL
                     WILPYVALGIGVLAALWFIRGWTLKKRQADTLRAPSPVASQAQSDALRQDFPLPDIED
                     ETQRAQLLRERCRLRDELNELEFDYQSGKLSDSDYGALKRDVETKGGLVMQQLTSLPA
                     EAKVVPAKKKSQPPPQEPAAHSRFKRWQLITGGLFLMLFGLTLGVMLTQSIRPRQGEG
                     DTMTGGFMTGTSPASGESGSALAEGKQAFERQEYPKAIEAFKKVLAADATNPEAHSYM
                     GFILMQAGHGDGALMAFEKALSRAPNLPMALWGKGMVLYQDKKEFAGARAIFERLLAI
                     VPPGDERNEIVKILAEIPASGGAATTAKPATAAASGQTISGTITIDAKLKSRLDPNAA
                     LFIIARPAGGPGGPPLAVKKIDKPTFPLSYSLSQENVMMQGTPFNGKINISVRLDKDG
                     NPATRGAGDLAGEYKKNPAEVGAKNADVILDQVMQ"
BASE COUNT          380 a          624 c          664 g          461 t
ORIGIN      
        1 cgggcaaagg acctattaaa gaccaatctc gggctgctcc acaagattgc ccagaagttg
       61 ctcgaaaaag aggttctcga cggctccgag atcgacgcca tcgtcaaagc ctttggcgct
      121 gtcgccatcg atccattcgc atcatcgagt gcggcggcgt ctgcttagaa ggtaatttaa
      181 ggtttcgctt tcgtgacccg gcagcagttc cgtcattgct gcgtgccaac atcccgcata
      241 gcgtgaaatg accagggacg ggtctagggg aaatattcag ccgcgcacaa gcacaccgct
      301 agcggtcgca atcctggccg ccccaccggt cgactattgc atcacctgat ccagaatcac
      361 atcggcattc ttcgccccca cctccgcggg atttttcttg tactcaccgg cgagatcgcc
      421 ggcgccgcgg gtggcgggat tgccgtcttt gtccaaccgg acggagatgt tgattttgcc
      481 gttgaacggc gtgccttgca tcatgacgtt ttcttggctc aggctgtagc tcagcgggaa
      541 ggtcggcttg tcgattttct tgacggcgag gggcgggccg ccggggccgc cggcgggtct
      601 ggcgatgatg aacaacgcgg cgttggggtc gaggcgcgat tttaatttgg catcgatggt
      661 aatggtgccg gagatcgttt ggcctgatgc cgccgcggtt gctggtttcg ccgttgtggc
      721 tgcgccgccg gatgctggga tttcggcgag gattttgacg atttcattgc gctcgtcgcc
      781 gggcggtact atcgccaaga ggcgttcgaa aatcgcccgg gcgccggcga attctttctt
      841 gtcctggtat agcaccatgc ctttgcccca gagcgccatg ggcaaattgg gcgcccgcga
      901 cagggctttt tcgaaggcca tcagcgcgcc gtcgccatgg ccggcctgca tgagaataaa
      961 tcccatgtag ctatgcgcct cgggatttgt tgcgtcggcg gccaaaactt tcttgaaggc
     1021 ctcgatcgct tttgggtact cctggcgctc gaacgcttgc ttgccctcgg ccaaggctga
     1081 gccgctctcg ccgcttgccg ggctcgtgcc ggtcatgaaa ccgccggtca tggtatcgcc
     1141 ttcgccctgc cgcggccgga tcgactgggt caacatgacg cccagggtga gaccgaagag
     1201 catgaggaat agcccaccgg tgatcagctg ccagcgcttg aagcggctgt gcgcggcggg
     1261 ctcttgcggt ggcggctggc tttttttctt cgcgggtaca actttggctt cggcgggcag
     1321 ggaagtcagt tgctgcatga ccagcccgcc tttggtttcg acatcgcgct tcagcgcgcc
     1381 gtagtccgag tcggacagct tgcccgactg ataatcgaac tcgagctcgt tcaactcatc
     1441 gcgcaaacgg cagcgctcgc gcagcagttg ggcgcgctgc gtttcatctt cgatatccgg
     1501 tagtggaaaa tcttggcgca gcgcgtcgct ctgcgcctgg ctcgctacgg ggctgggagc
     1561 ccgcagtgtg tctgcctggc gcttttttag cgtccagccg cggataaacc agagcgccgc
     1621 gagcacgccg atgccgagcg ccacataggg caatatccac aaaagcgcgc tgaagccggt
     1681 ggtcttgggg cggagcaaaa cccattcgcc gtacttggaa acaaagaagt ctttgatctc
     1741 gtcggtggtt tttcccgctt gcacttgctc gcgcacgatg gcgcgcatct gctgggccat
     1801 ctccgacggc gagtcggcga ccgagagatt ctggcagacc acgcagcgca gttcggtggc
     1861 gatctcgcgg gtgcggtcgt cgatatcggc agtcgccgcg gcgtggagcg gcgaagaggc
     1921 cagaagcaga aatacgcaaa ccacagataa tttaaaatag ctcatcgccg tcagcgcact
     1981 ccctgatagt cgccgcgccc ttcctgggcg ctggcgatgc ctttggccga ttcgtcgagc
     2041 ttggccaaga cgagcgaggc acgaatgccc ccgacgtgct tataggtaat tcggccttga
     2101 gggtcgatga aaaaactttc aggaatccc
//
LOCUS       DATIRS010000335         1639 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1206861, whole genome shotgun sequence.
ACCESSION   DATIRS010000335 DATIRS010000000
VERSION     DATIRS010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1639
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1206861"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..552)
                     /locus_tag="VLM90_04175"
     CDS             complement(<1..552)
                     /locus_tag="VLM90_04175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12185.1"
                     /translation="MKTKVFTWLGREFVEIIGEGKAGAPPESAANLLFQQFEAELKAY
                     GLSLDNAARIRVWGRDRDARTLATAARSKILTGKRRAASSSFISQEWFDSDATAGLEL
                     LAMRLLNSNAERNPVDFEPARNYLCYLDHDGMLFFSGFTSEAPTLEKQVEEVLATIDG
                     ALARARTDWRKVIRLSALVQRGHD"
     gene            707..1117
                     /locus_tag="VLM90_04180"
     CDS             707..1117
                     /locus_tag="VLM90_04180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12186.1"
                     /translation="MFRRVLSAQGQSRSAKTVEVFGWLILIEGTIVLFAPHFVVSLLH
                     IAPLNDQAANYFRLVGLLVCGVGMLYVASGRLNAEGFVFASMLDRPLVPIAMAILWYL
                     EIIPGPLALIFSIQDFGSFLWTLSSWRAEHGGAK"
     gene            1129..>1639
                     /locus_tag="VLM90_04185"
     CDS             1129..>1639
                     /locus_tag="VLM90_04185"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HSQ12187.1"
                     /translation="MSNTAIGFIGLGIMGKPMARNLLKAGYPLVVHNRSRAAVEELSK
                     EGAQIAANSKEVAERSEIIITMLPDSPDVELVYAGDIGIFSGVKSGSLLIDMSSISPI
                     VARKLAAEAKKRGSDMLDAPVSGGEAGAIGATLSIMIGGKVTAVERAMPIFQALGKNI
                     VHVGDAGAGQ"
BASE COUNT          333 a          497 c          449 g          360 t
ORIGIN      
        1 atcgtgaccg cgctgcacca gcgccgataa tcttatgact ttgcgccagt cggtccgtgc
       61 gcgcgccaac gcgccgtcga tcgtggcaag gacctcctcg acttgtttct ccaatgtcgg
      121 cgcctccgat gtgaagccgg agaaaaatag cattccatca tggtcgagat agcaaaggta
      181 gtttcgcgcg ggttcgaaat cgacgggatt tcgctccgcg ttcgaattga gcaggcgcat
      241 tgccagcaat tccaacccgg cagtcgcgtc cgaatcgaac cactcctgcg agatgaaact
      301 ggagctcgcc gctcggcgct ttcccgtgag aatcttggac cgcgccgcgg tggccaaggt
      361 gcgcgcatct ctgtcccgtc cccacacccg gatacgcgcc gcgttatcga gcgacaaacc
      421 gtacgccttg agctccgcct caaattgctg aaacaataag ttggcggcgc tctccggcgg
      481 tgcgccggct ttcccctcgc cgatgatctc aacgaactct ctacccagcc aagtgaacac
      541 ttttgttttc atgtcggcca ctctaccgca actcacatcg ccgtgaaaag actacctcca
      601 tcatttcaga cgatgccttt cggcaacttg cctttccgcg cccttttgac atatgtgagt
      661 gcatcgccgc agcgacctca tgcgatggaa ggagcaacga tcgcccatgt tccgccgtgt
      721 actcagcgcc caagggcaaa gccgctcggc caagaccgtc gaggtcttcg gctggctgat
      781 tctgatcgaa ggcaccatcg tgctgttcgc tccccatttc gtcgtttctc tactgcacat
      841 cgcaccactg aacgatcagg ccgccaatta ctttcggctg gttggattgc tcgtctgcgg
      901 ggtcggcatg ctttatgtcg ccagcggccg cctaaacgcg gaaggatttg tgttcgcttc
      961 catgcttgac cgcccgctcg tacccatcgc gatggcaatc ctttggtacc ttgaaatcat
     1021 tcctggaccg ctggctttga tattttcgat tcaggatttc ggcagctttc tctggacttt
     1081 gtctagttgg cgtgccgagc acggcggcgc aaaataggag aattggacat gagcaatacg
     1141 gcgattggtt ttatcggcct cggcatcatg ggtaagccca tggcgcgcaa cttgttgaag
     1201 gcgggctatc ctctggtcgt gcacaaccgt agccgcgcgg cggtggaaga gttgagtaag
     1261 gaaggcgcgc agattgcggc aaattcaaaa gaagtcgccg aacgcagcga aatcattatc
     1321 accatgctac ccgactcgcc cgacgtcgaa ctcgtctacg ctggcgacat tggaattttc
     1381 tccggagtga aatcaggtag tctcctcatc gacatgtcca gcatttcgcc tattgtcgcg
     1441 cgaaagctcg ccgctgaagc caagaaacgc ggcagcgaca tgctcgatgc gccggtgagt
     1501 ggcggcgaag cgggcgccat cggcgccact ctgtcgatta tgatcggcgg caaagtaaca
     1561 gcagtcgaac gcgcgatgcc aatctttcag gcgctcggca aaaacatcgt ccacgtcggt
     1621 gacgccggcg caggccagg
//
LOCUS       DATIRS010000336         1890 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_517894, whole genome shotgun sequence.
ACCESSION   DATIRS010000336 DATIRS010000000
VERSION     DATIRS010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1890
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_517894"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            20..>1890
                     /gene="aceE"
                     /locus_tag="VLM90_04190"
     CDS             20..>1890
                     /gene="aceE"
                     /locus_tag="VLM90_04190"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045250 - cytosolic pyruvate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004738 - pyruvate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HSQ12188.1"
                     /translation="MPDFWQFPTVSMGLAPIMSIYQARFLRYLKSRDMLTGEEPRVWC
                     YAGDGEMDEPESTGALTLASRENLDNLVWVVNCNLQRLDGPVRGNGKIIQELESVFRG
                     AGWNVIKVVWGSDWDPLLEADETGLLLKRMEEAVDGDYQKYSVEPGSYTRKHFFGKYP
                     ELLALVNHLTDDQIRKLLRGGHDPMKVYAAYKAAVEHKGAPTVILAKTVKGYGLGEAG
                     EGRNITHQQKKLNERELREFRTRFDIPLPDEEVVETPFYRPPQDSPETKYLLERRKEL
                     RGFVPERKVRAKPLGLPEDSEYAEFLKGSGDHSMSTTMSAVRILTKLLRHDELGKRIV
                     PIIPDEARTFGMDSLFRQIGIYSPKGQLYEPVDRETLLYYHEAKDGQILEEGITEAGA
                     MSSFIAAGTAYANLRINMVPFYFYYSMFGFQRIGDLIWAAADSKSKGFLLGATAGRTT
                     LNGEGLQHQDGHSHLLASTVPTLFTYDAAFGYEIAVIIKDGLRRLYAEGEEYFYYLTL
                     YNESYNMPAMPAGAEDGILKGLYKLKPATKGKKFKAHILGSGPLLREALRAQEILAEQ
                     FDVAADVWSATSYKLLRGDALRTKRWNMLHPTAPPKKSYLESILQDEEGVFIAVSDY"
BASE COUNT          442 a          557 c          523 g          368 t
ORIGIN      
        1 gtacccgcat ccttatctaa tgcctgattt ttggcagttc ccgacggtgt cgatgggcct
       61 cgcaccgatc atgtcgatct atcaggcgcg ctttctacgt tacctcaaga gccgcgatat
      121 gttgaccggc gaagaacctc gagtgtggtg ctacgccggc gacggcgaaa tggacgagcc
      181 ggaatcgacc ggcgcattga ccctcgcttc gcgtgagaac ctcgacaatc tcgtctgggt
      241 cgtcaattgc aatctccagc gcctcgatgg acccgtgcgg ggcaacggca agatcatcca
      301 ggaactcgaa tcggtgtttc gcggcgcggg ttggaacgtg atcaaagtcg tctggggctc
      361 cgattgggac ccgttgttgg aagcagacga aacgggtctc ttactcaagc gcatggaaga
      421 agcggttgac ggcgattatc agaaatattc cgtcgagccg ggcagctaca cacgcaaaca
      481 tttcttcggc aaatatcccg agctgttggc gttggtgaat catttgaccg acgaccagat
      541 ccgcaaattg ctgcgcggcg gccacgatcc gatgaaagtt tacgccgcct ataaagccgc
      601 ggtggagcac aagggcgcgc ccacggtcat tctcgccaag acagtcaaag gctacggcct
      661 aggcgaagcc ggcgaaggcc gcaacatcac ccatcagcaa aagaaactga acgagcgcga
      721 gctgcgcgag ttccgcaccc gcttcgacat tccactaccc gacgaagaag tcgttgagac
      781 gcccttttac cgcccgccgc aagacagccc tgagaccaag tatttgctgg aacgcagaaa
      841 agaactgcgc ggcttcgtac ccgagcgcaa ggtcagggcc aaacccctgg gcctacccga
      901 ggacagcgag tacgcggaat ttttaaaggg ctccggcgat cattccatgt cgacgacgat
      961 gtcggcggtg cggatcttga ccaagctcct gcgccatgac gaactcggca agcgcatcgt
     1021 accgatcatt ccggacgagg cgagaacgtt cggcatggat tcactgtttc gccagatcgg
     1081 catctattcg cccaagggtc aactttatga accagtggac cgcgagactt tgctttacta
     1141 ccacgaagcc aaagacggac agatcctcga ggaaggcatc accgaagccg gcgccatgtc
     1201 gtcgttcatc gccgccggca cggcctacgc caatctgaga atcaacatgg ttcccttcta
     1261 tttttactat tcgatgttcg gctttcagcg catcggcgat ctgatctggg ccgcggccga
     1321 cagcaagagc aagggatttc ttctaggggc taccgccggc cgcaccactc tcaacggcga
     1381 aggactgcag catcaggacg gccacagcca tttactggcg agcaccgtgc ccactttgtt
     1441 cacctacgac gccgcctttg gctatgagat cgcggtcatc atcaaagacg gcctgcgccg
     1501 tttgtatgcc gaaggtgaag aatattttta ttacctgacg ctctacaacg agagctacaa
     1561 catgccggcg atgccggcgg gcgccgaaga tggcatcctc aaaggcctgt acaaactgaa
     1621 gccggcaacc aaggggaaaa aatttaaagc gcatattctt ggcagcggcc cgctgctgcg
     1681 cgaagcgctg cgcgcccagg aaatattggc cgagcagttc gatgtcgccg ccgacgtttg
     1741 gagcgccacc agttataaac ttctgcgcgg cgacgcgctc cgaaccaagc gctggaacat
     1801 gctccacccg accgcgccgc caaagaaatc ctatctcgaa tccattttgc aagacgaaga
     1861 aggggttttt atcgcagtat cggattacaa
//
LOCUS       DATIRS010000337         1679 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1600086, whole genome shotgun sequence.
ACCESSION   DATIRS010000337 DATIRS010000000
VERSION     DATIRS010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1679)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1679)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1679
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1600086"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..619)
                     /gene="thiE"
                     /locus_tag="VLM90_04195"
     CDS             complement(<1..619)
                     /gene="thiE"
                     /locus_tag="VLM90_04195"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004789 - thiamine-phosphate
                     diphosphorylase activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HSQ12189.1"
                     /translation="MSLSLPPLYAILDPEQIKGRAIEELLRDLLRAGVKMIQLRAKSL
                     AANEFLALANLVRSETEAHNCRLIVNDRADIAMACNADGVHLGQDDLPLHAGRTLLGN
                     KIIGISTHDIEQARQAQRDGADYIGFGPMFGTQTKNTGYSARGIDMLKEIRAAVAIPI
                     VAIGGINEHNVRQVWQAGADSAAIISDILGSTNIAAKIEAILTQFR"
     gene            complement(624..>1679)
                     /locus_tag="VLM90_04200"
     CDS             complement(624..>1679)
                     /locus_tag="VLM90_04200"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSQ12190.1"
                     /translation="LKEEVKKRFEPGVNIIGTSAAMQGVYKTIGQVVDNTATILILGE
                     SGTGKELVAKTIHYNSPRWNQPFIAINCAAIPRELLESELFGHEKGSFTGAMDRRLGK
                     FELAEGGTLFLDEVGDIPLDLQTKLLRVLQDHEYSRVGGRDILKADVRILAATNQDLE
                     KSVREKRFREDLYFRLKVIPIHLPPLRERRGDISLLIGYFIDKINREMGIQISSISPE
                     AQKLLEEHSWPGNVRELENTLIRAAVLSSGPILFPKDFTLQNKPAATTLEVDQLSLEE
                     IIRHKLEDYFRRTEGVDVDNLYSLVIERIERPLIELTLKKTKGNQIKAAEILGINRNT
                     LRKKISDLGIELKKEPG"
BASE COUNT          297 a          434 c          535 g          413 t
ORIGIN      
        1 atcgaaactg agttaagatg gcttcgatct tggcggcgat atttgtgctt cccaatatgt
       61 cgctgatgat cgccgctgag tcagcgccgg cttgccaaac ttgccggacg ttgtgttcgt
      121 tgatgccgcc gatggcgacg attgggattg ccacagccgc gcggatttct ttgagcatgt
      181 cgatgccccg ggcgctgtag ccggtgtttt tcgtctgagt gccgaacatg gggccaaacc
      241 cgatgtagtc ggcgccgtcg cgttgcgctt gccgtgcctg ctcgatgtcg tgggtggaga
      301 tgccgatgat tttgttccca aggagtgtgc gcccggcgtg gagcggcagg tcgtcctgtc
      361 cgaggtgcac accgtcggcg ttgcatgcca tggcgatgtc ggcgcggtcg ttgacgatca
      421 aacggcagtt gtgcgcttcg gtttcgctgc gaactaaatt agccagtgcc aggaattcgt
      481 tggcggcgag ggatttggcg cgcagctgga tcatttttac gccggcgcgc aacagatcgc
      541 gcaagagttc ttcgatggcg cggcccttga tctgttccgg atcgaggata gcgtagagcg
      601 gcgggagaga aagagacatc gggctagccg ggttctttct tgagctcgat gcccaggtcg
      661 gagatcttct tgcgcagggt gttgcggttg atgccgagaa tctccgccgc cttgatctgg
      721 ttgcctttgg tcttcttgag cgtgagttcg atcagcggcc gctcgattct ttcgatcacc
      781 agcgagtaga ggttgtcgac atcgacgcct tctgtgcgcc ggaagtagtc ttctaacttg
      841 tgccggatga tttcttcgag ggacagttga tcgacttcga gggtggtcgc cgccggcttg
      901 ttttgcaacg taaaatcctt gggaaagagg atcggcccgg aggacagcac ggcggcgcga
      961 atcagtgtgt tttccagctc gcgcacgttg ccgggccagg agtgttcttc aaggagcttt
     1021 tgcgcctcgg gagaaatgct ggagatctgg atgcccatct cgcggttgat cttgtcgatg
     1081 aagtaaccga tcaagagcga aatatcgccg cgtcgctcgc gcagcggcgg cagatggatc
     1141 gggatgactt tcagacggaa gtagagatct tcgcgaaagc gtttttctct gaccgatttt
     1201 tccagatcct gattggtggc ggcgagaatg cgcacatcgg ctttaagaat gtcgcggccg
     1261 ccgacacggc tgtattcgtg atcctggagg acccgcagca atttggtctg gagatcgagg
     1321 ggaatgtcgc cgacctcatc caaaaacagc gtgccgcctt cggctagttc gaacttgccc
     1381 aagcgccggt ccatggcgcc agtgaatgag cctttctcat ggccgaacag ttcgctctcc
     1441 aacagctccc gcggtatggc ggcgcagttg atggcgatga agggttggtt ccagcgcggc
     1501 gaattataat gaattgtttt tgccaccaat tccttgccgg tgccgctctc gcccaagata
     1561 agaatggtcg cggtgttatc gaccacctgg ccgatggtct tgtagacccc ttgcatggcc
     1621 gcgctggtgc cgatgatgtt gacgccgggc tcgaagcgtt ttttgacctc ctctttgag
//
LOCUS       DATIRS010000338         1869 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_517957, whole genome shotgun sequence.
ACCESSION   DATIRS010000338 DATIRS010000000
VERSION     DATIRS010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1869
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_517957"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..769)
                     /locus_tag="VLM90_04205"
     CDS             complement(<1..769)
                     /locus_tag="VLM90_04205"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: protein motif:HMM:NF003792.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HSQ12191.1"
                     /translation="MATVKTKFIFVTGGVVSSLGKGLAAASIGALLESRGLKVTMLKM
                     DPYINVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFVSTPMGRKNNCTTGQIYETV
                     IANERRGDYLGGTVQVIPHITDEIKRRILAAAEGYDIAIGEVGGTVGDIEGLPFLEAV
                     RQIAWDWGRENVLYIHLTLVPYITGGGELKTKPTQHSVKELTGLGIQPDILLCRTDRY
                     LDRKIKTKIAHFCNVAESAVITAKDVEWIYEVPLVFHE"
     gene            complement(779..1552)
                     /gene="kdsB"
                     /locus_tag="VLM90_04210"
     CDS             complement(779..1552)
                     /gene="kdsB"
                     /locus_tag="VLM90_04210"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: protein motif:HMM:NF003950.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008690 - 3-deoxy-manno-octulosonate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HSQ12192.1"
                     /translation="MIVVAIIPARYGSTRLPGKPLANIGGKPMIQHVYESASKARVLD
                     RVLVATDDRRIENAVHAFGGEVMMTSPDHASGTDRLAEVARRIKADWLVNVQGDLPFI
                     HSETISRAVVPMRRDRTIPMGTVCAPILNEVELRNPNIVKVLTDRAGFALYFSRAPIP
                     YYRNSVIDPKGGKISARSKNRLWGYRHLGLYVYRRDFLLKFARLRPTALERIESLEQL
                     RALQNGYRIYVAEVDERSVEVDTPEDLKTAERYLKRKRI"
BASE COUNT          400 a          541 c          507 g          421 t
ORIGIN      
        1 cttcatgaaa caccagcggc acttcgtaaa tccactccac gtccttggcg gtgattaccg
       61 cgctctcagc gacgttacag aaatgcgcga tcttggtctt gattttccta tcgaggtagc
      121 ggtcggtgcg gcacagtaag atatcgggtt gaatgcccag gccggtcaac tccttcacgc
      181 tatgctgcgt cggttttgtc ttcagctcgc cgccgccggt aatgtagggg accagggtca
      241 gatgaatgta aagaacgttt tctctgcccc aatcccaggc gatctgccgc accgcttcga
      301 gaaacggcag tccttcgata tcgccgacgg tgccgccgac ttcaccgatg gcgatgtcgt
      361 agccttcggc ggcggcgagt atgcgtcgtt tgatctcgtc ggtgatgtgc gggatgacct
      421 gcacggtgcc gccgaggtaa tcgccgcgcc gctcattggc gatcacggtc tcgtagatct
      481 gaccggtggt gcaattattt ttgcgtccca tcggcgtcga gacgaagcgt tcgtagtggc
      541 cgagatcgag atcggtctcg gcgccgtcgt cggtgacgaa cacttcgccg tgctggtacg
      601 gactcatggt gccgggatcg acgttgatgt aagggtccat ttttagcatc gtgactttga
      661 ggccccggct ttccagcagc gccccgatgg aagccgcggc caagcctttg cccagcgagg
      721 aaacgacgcc gccggtgaca aaaatgaatt tggtttttac agtcgccatg gcttcctttc
      781 agattcgctt ccgtttcaaa tagcgctccg ccgttttcaa atcctcgggg gtatcaactt
      841 ccaccgatct ttcatcaact tccgcgacgt aaatccgata accattttgt aacgctctta
      901 gttgctcgag actctcgatc cgttccaacg ccgtcggccg gagccgggcg aatttgagta
      961 aaaaatcgcg ccggtaaacg taaagcccga gatggcgata gccccacaac cgatttttgc
     1021 tccgtgccga tattttaccg ccttttggat cgataacgct attcctataa taaggaatcg
     1081 gcgcccgcga aaaataaagc gcaaagccgg cgcggtcggt cagaaccttc acgatgttcg
     1141 ggttgcgcaa ttctacttca ttcaatatcg gcgcgcacac cgtgcccatg ggaatcgtcc
     1201 ggtcgcgccg catcggcacc accgcccgcg agatcgtctc ggagtgaatg aacggcaggt
     1261 cgccttgcac gttcaccagc caatccgcct tgattctgcg cgccacttcg gccaatcgat
     1321 ccgtgccgct ggcatgatcg ggcgaagtca tcatgacttc gccgccgaac gcgtgcaccg
     1381 cattttcaat gcgccgatcg tcggtggcga ctaaaactcg atccaacacc cgcgccttcg
     1441 acgcgctctc gtagacgtgt tgaatcatcg gcttcccacc gatgttggct aacggctttc
     1501 ccggcagacg ggtcgaacca tagcgcgccg gaataatcgc cacgacgatc atcggttcac
     1561 ggattcagcg gtgcgctcac tgcgaaaaga gatgtcaaag tcgcgttctc gtcccacaaa
     1621 taaaaaaccg caatggcttt ccgggaaagc gcattacgga atttgataat acgcggacac
     1681 taaaatggtg tcaatgagat tccacgttgg cggcagtcaa actttcaaca aatcctaata
     1741 aaagtggcga ccatccctcg gcgacgcatg gttcgcggct tgactccgcg cagccgactc
     1801 atgatagaaa taggatgatc gatgcgaggg tttcgacggc gcgtcaggaa agatcgtcgg
     1861 gagcgaata
//
LOCUS       DATIRS010000339         2601 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1600238, whole genome shotgun sequence.
ACCESSION   DATIRS010000339 DATIRS010000000
VERSION     DATIRS010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2601
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1600238"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..777
                     /locus_tag="VLM90_04215"
     CDS             <1..777
                     /locus_tag="VLM90_04215"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HSQ12193.1"
                     /translation="STGPAVVRLQIKLKKVGFNPGRADGDFGPATAAALIGFQKSAGL
                     LADGIAGPRTLAALKLAANDRLPSVIPGVTVTIVSKMFPFTQVDNIRDNLPFVLKGLV
                     ERTLGDKPMVLMALATLRAETESFQPINEGLSKFNTSPGGHPFDLYDFRSDLGNQGEG
                     DGAKFRGRGYIQLTGRFNYQKLGAALDMGGKLATNPELANDPAIAGKLLAAFLKDKER
                     AIKEALIIGDLRLARRLVNGGSHGLDRFSDAFRIGESLIT"
     gene            complement(814..1794)
                     /locus_tag="VLM90_04220"
     CDS             complement(814..1794)
                     /locus_tag="VLM90_04220"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12194.1"
                     /translation="MKISLKSSIAGLLVVVGLMAHAAPAQETMRVAIPLFPTAAFPLL
                     VANDRGFFRNEGLTVEPIRINSAPTTYQALISGDVHAVSGAPTGLLPSHAQGADVIAL
                     GSWDNLVPYVWVTREKIADIRELRGKRIGVNRAGSKPWLIVHVLLQDAGLDPAKDLTL
                     LQMGGGSIERIGALMRGGIDATLADVLFEPVMKKRGFFVLRGKPTPFMNAPIAVKRSF
                     ATGQRSTLKKFVKAYADATRYMIDNRDGTMRPLTRLLDTNDADVLDFAYQYLHANSEA
                     SLYPPEDAVRNLIRMAGYMDKKLASISVSRVMDLSLLDELGTKRHQRGQR"
     gene            complement(1827..>2601)
                     /locus_tag="VLM90_04225"
     CDS             complement(1827..>2601)
                     /locus_tag="VLM90_04225"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HSQ12195.1"
                     /translation="SSGKSCESAVRAALDAGYRHIDTAAFYGNEESVGKAVRESGIPR
                     GEIYLTTKLWNSDHGNPVRALERSLGKLKMDYVDLYLIHYPVPERLRSWRVLERLRAG
                     GKARSIGVSNFTIGHLTDLLANSETVPAVNQVELHPYLYQRELLDFCHDKNIVIEAYS
                     PLTHGERLNDAKLVAMARKYPAANNKSSPSAANKSTAQILIRWALQHDVVVIPKSAKR
                     ERIIEDADVFGFTISAEDMRTLDGFNENLRTCWDPTHAP"
BASE COUNT          525 a          779 c          762 g          535 t
ORIGIN      
        1 tccaccggcc cggccgtagt caggctgcaa atcaagctga aaaaagtcgg tttcaatccc
       61 ggccgcgccg atggcgattt cggcccagcc acggccgcag cgctgatcgg atttcaaaaa
      121 agcgccggcc tgctcgctga cggtatcgcc ggaccgcgca cgctggcagc gctaaagtta
      181 gccgccaacg accgcttacc gtcggtgatc ccaggcgtga cggtcaccat cgtctccaag
      241 atgtttccgt tcacacaagt ggacaacatt cgcgacaacc tgccgtttgt cttgaagggc
      301 ttggtcgagc gcaccctggg cgacaagccg atggtgctga tggcactggc gacccttcga
      361 gccgagaccg aaagcttcca gccgatcaat gaagggctat ccaagttcaa tacatctccc
      421 ggcggtcacc ctttcgatct ttacgatttt cgctccgacc tgggcaacca gggcgagggc
      481 gacggggcaa agtttcgcgg ccgcggttac attcagctca ccggccgttt caactatcag
      541 aaactcggcg ccgctctgga catgggcggc aaactggcga ccaaccccga gctcgccaac
      601 gatccagcca tcgccggcaa gctgctcgcg gcatttctca aagacaagga acgcgctatc
      661 aaagaagcct tgatcatcgg cgatttgcgc ctggcacgcc ggctggtcaa cggcggtagc
      721 cacggtttgg atcgtttctc ggatgcgttc cgcatcggcg agagtttgat cacctagcac
      781 aacccaaaag ctcgcagctt gaaattgtcg cggctaccgc tgtccgcgct ggtgccgctt
      841 ggtgcccagt tcgtcgagta gcgataggtc catgacccga ctgacgctga tggacgctaa
      901 tttcttgtcc atgtagcccg ccatgcggat gagattcctg accgcatctt caggcggata
      961 gagggacgcc tcggagttgg catgcaaata ctgataggcg aagtcgagga catcggcgtc
     1021 gttggtgtcg agcaatcgcg tcagcgggcg catggtgcca tcgcgattgt cgatcatata
     1081 gcgggtcgcg tcggcgtagg ccttgacgaa ttttttcagc gtcgagcgct gcccggtggc
     1141 gaaggaacgc ttgacggcga tgggcgcgtt catgaacggc gtcggcttgc cgcgcaaaac
     1201 aaagaagccg cgttttttca tgaccggttc gaacaacacg tcggcaagcg tcgcatcgat
     1261 gccgccacgc atcagcgcgc caatccgttc tatggaaccg ccgcccatct gcagcaaagt
     1321 caaatccttc gccggatcga gaccggcgtc ttgcaacagc acatggacga tcaaccaggg
     1381 tttactaccg gcgcgattga cgccgattct tttgccgcgc agttcgcgga tgtcagcgat
     1441 cttttccctg gtcacccaga catagggaac cagattgtcc cagctgccca gcgcgatcac
     1501 atccgcgcct tgcgcatgac tcggcagcaa gccggtgggg gcgccggaga cggcgtgaac
     1561 gtcgcccgag atcagcgctt gataggtggt cggcgcgctg ttgatgcgga tcggttcgac
     1621 ggtcagtccc tcgttgcgaa aaaagccgcg gtcattggcc accagtaagg gaaaggccgc
     1681 ggtcggaaat agcgggatcg ccacccgcat ggtttcttgg gccggcgcgg cgtgcgccat
     1741 caagccgaca acgacaagca aaccggcaat gctggacttt agcgagattt tcatcttcgc
     1801 ctccttagcc aatggcgatc aattggttat ggcgcatggg tcgggtccca gcaagtccgc
     1861 aagttttcat tgaagccatc gagcgtccgc atgtcttcag cgctgatagt gaagccgaag
     1921 acatcggcat cttcgataat tcgttctcgc ttcgccgatt tcggaatgac cacgacatca
     1981 tgctgcaatg cccagcggat caggatctgc gccgtcgact tgttggcggc actcggggat
     2041 gacttgttat tagcagctgg atactttcgc gccatcgcca ccagtttcgc atcgttgagc
     2101 cgctcgccgt gagtcagcgg gctataggcc tcgatcacga tatttttgtc atggcagaaa
     2161 tccagcaact cgcgctggta caagtacgga tgcaactcca cctggttgac ggcgggaact
     2221 gtctcgctgt tggcgagcag atcagtcaaa tgtccgatcg tgaaattgct cacgccgatg
     2281 gagcgtgctt tgccgcctgc gcgcaagcgc tccaggacgc gccaactgcg caaccgttcc
     2341 ggcaccgggt aatggatgag gtagagatcg acataatcca tcttgagctt gccgagactg
     2401 cgttccaggg cgcgcacggg attgccatga tcgctgttcc acaatttggt ggtgagataa
     2461 atttcgccgc gtggaatgcc actctcgcgg acggctttgc cgacgctctc ttcgttaccg
     2521 taaaacgccg ccgtgtcgat atgccggtag ccggcgtcga gcgccgcgcg caccgccgac
     2581 tcgcagctct tccctgagct g
//
LOCUS       DATIRS010000340         1803 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_223750, whole genome shotgun sequence.
ACCESSION   DATIRS010000340 DATIRS010000000
VERSION     DATIRS010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1803)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1803)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1803
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_223750"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(54..284)
                     /locus_tag="VLM90_04230"
     CDS             complement(54..284)
                     /locus_tag="VLM90_04230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12196.1"
                     /translation="MKEFTLIGRANKIGCPLLVGYSIDDRVMDPRGALKLYENAVNSP
                     DRSMVDGVGHGQKKFDRRTYIADWFMKQLNAA"
     gene            complement(281..1189)
                     /locus_tag="VLM90_04235"
     CDS             complement(281..1189)
                     /locus_tag="VLM90_04235"
                     /inference="COORDINATES: protein motif:HMM:NF018234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSQ12197.1"
                     /translation="MANKTGGDVFDRVEAEKLLYPAKGLAGGGQLEVRMEVSADHPDP
                     DIRGVSRRVKFFNLESWHKEWIEVAKKNEELAAGFEQERRKQTAHEFYLRAADFYRRA
                     VVYMPETDARMLPSFKKLEENFDNAWRMVKPPFERVDISYEGHKLPALFWPGRGKAGE
                     KLPVVYNYGGADGILLRGEDGGAGQYVRRGMSFIDVDGPGHGGTLRYHNLYAPPDSER
                     VAKAVVDYLVTRPDVDAERIGLHGSSMGGYSGPRCATMEKHIKAVAVWSGAYNLVDDI
                     FDYYPPIQDRLRWLIGAKDLKEAREK"
     gene            complement(1320..>1803)
                     /locus_tag="VLM90_04240"
     CDS             complement(1320..>1803)
                     /locus_tag="VLM90_04240"
                     /inference="COORDINATES: protein motif:HMM:NF012345.4"
                     /note="Members of this family of hydrolases with an active
                     site Cys residue belong to MEROPS family C26; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HSQ12198.1"
                     /translation="NLIPRRTKFELALAQMALRADMPLLGICGGAQAINVVLGGSLIQ
                     DVSTQIGGAVEHQQSAKKQTGGHRIDVMRGTLLYRILGRPSLEVNTTHHQAIKEPGKG
                     LIVNAVAPDGVIEGIESARHTFVLGVQWHPEILARRQLPHRRLFLSFLASCKRFRRGR
                     "
BASE COUNT          357 a          516 c          508 g          422 t
ORIGIN      
        1 gatctaatag tcatcttact ctcgcttaat taaggtccat cgaagctagt aaactacgcc
       61 gcgttcagtt gcttcataaa ccagtcggcg atgtaagtcc tgcggtcgaa tttcttttga
      121 ccgtggccga cgccgtcgac catcgagcgg tcgggcgaat tgacggcgtt ttcgtagagc
      181 ttgagggcgc cgcgcgggtc catcacgcga tcgtcgatac tgtagcccac cagcaatggg
      241 catccgatct tattcgctcg accgatgagc gtaaattctt tcatttttcg cgcgcctctt
      301 tgagatcttt cgcaccgatc aaccagcgca aacggtcttg gatcggtggg tagtagtcga
      361 aaatatcgtc gaccaaattg tacgctccgc tccacacggc gaccgctttg atgtgttttt
      421 ccatcgtggc gcagcgcggg cccgagtaac cgcccatgct ggagccatgc aggccgatgc
      481 gctcggcgtc gacatcgggg cgggtaacga gataatcgac gactgccttg gcaacacgtt
      541 ctgaatcagg cggagcgtaa agattgtgat agcgcagcgt gccgccgtgt cctggaccgt
      601 cgacgtcaat gaaggacata ccgcgtcgaa cgtattggcc ggcgccgccg tcttcgccgc
      661 gcagcaagat gccgtcggcg ccaccgtaat tatagaccac cggaagtttt tcgccggctt
      721 taccacggcc cggccagaag agcgccggca gtttatggcc ctcgtaggaa atgtcgaccc
      781 gttcgaaggg tggcttgacc atgcgccagg cgttgtcgaa gttttcttcg agctttttaa
      841 agctcggcaa catgcgcgca tccgtctcgg gcatgtagac gaccgctcgg cggtaaaaat
      901 cggcggcgcg cagataaaat tcgtgggcgg tttgtttacg cctctcctgt tcaaaccccg
      961 ccgcaagttc ttcgttcttc ttcgcgactt cgatccactc cttgtgccaa ctttcgagat
     1021 tgaaaaactt gactcggcgg gaaacgccgc ggatatccgg atcaggatga tccgccgaca
     1081 cttccatgcg cacttcgagt tgtccgccgc cggccaagcc tttggcggga tagagcagct
     1141 tttccgcttc gacgcggtca aatacatcgc cgccggtttt gttcgccata atctgtgctc
     1201 cttctgctcc agaggaaacg atttgctctc ttgtttgcct tagctctggc aaaaattcaa
     1261 cgcaatccag ggggtcccta cggccttata tgccgagttg atggaaggaa caagcgcgct
     1321 tatcggccgc gacgaaatcg cttgcagctt gcaagaaagg agagaaacag tcggcggtga
     1381 ggtaattgcc ggcgcgccaa gatttctgga tgccactgca cgccaagtac aaaagtgtgg
     1441 cgcgcgcttt caatgccttc gatcacgccg tcgggcgcca cggcgttgac gatcaatccc
     1501 ttgccaggct ctttgatcgc ttggtgatgg gtcgtgttaa cctccaaact cggtcgcccc
     1561 aggatgcgat agagcagggt tccgcgcatg acgtcgatgc gatggccgcc ggtttgtttt
     1621 tttgcgctct gttgatgttc cacggcgccg ccgatttgcg tgctgacgtc ttggataagc
     1681 gatccgccta aaacgacgtt gatcgcttgc gctccgccgc agatgccgag cagcggcatg
     1741 tcggccctaa gggccatctg cgccagcgca agctcgaatt tggtcctccg gggaattaaa
     1801 ttg
//
LOCUS       DATIRS010000341         2680 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1502188, whole genome shotgun sequence.
ACCESSION   DATIRS010000341 DATIRS010000000
VERSION     DATIRS010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2680)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2680)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2680
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1502188"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(240..1235)
                     /locus_tag="VLM90_04245"
     CDS             complement(240..1235)
                     /locus_tag="VLM90_04245"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/NAD(P)-binding oxidoreductase"
                     /protein_id="HSQ12199.1"
                     /translation="MQLLSRRKKIVILGGGCGGVVAATHLGRKLGDDHDVILIDRRAD
                     HIFMPAFLFIMIGERQPRDISRNLKVIEKRNVRVIQSEILGIDPIRQEISLEKEKINY
                     DYLITSLGLQTRPDLVPGFAEGSQHPWEMESALRLRASLESFRGGRVVVGVPLGPYRC
                     PPAPYEAQWMLDGYFRQKGIRDRVQIDYFTREAEPTGEAHDPAVWMNAESKRRGIKQH
                     YEFVVRSIEPEKKVVQGLYNYNIPYDLLVMVPPHRPAQVLLDSGLAESETGIRVDYDT
                     LQTKWDNVYAIGDCADLPASKAGGVAHQEAEVLAHNLAVEITGKGRPVDLWLHTI"
     gene            complement(1260..1445)
                     /locus_tag="VLM90_04250"
     CDS             complement(1260..1445)
                     /locus_tag="VLM90_04250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12200.1"
                     /translation="MEWLKDLSDTLIIWFLRASSGFGKELNADGRREQQLWREQRLRN
                     LQGLAQRSKQRFGAQDK"
     gene            complement(1507..2475)
                     /locus_tag="VLM90_04255"
     CDS             complement(1507..2475)
                     /locus_tag="VLM90_04255"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF012904.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HSQ12201.1"
                     /translation="MATTKPISGIIGACLTPFDVNDRVDYKALEKEIEFLIPDCDAIT
                     VAAVEAAEYTMLSRDERKEVLKVATEMIGGRVPVILGCSSPAPREVIELAEYAAKVNG
                     DFIQVLMPLRPWGGQPTIAELMEFYTQVASASPLPVTWYHNPGPGADPPQDAFVKISE
                     IDNIRYFKESSRDITKISRLIEQIELAGRGHYFTTMQPLLVTLMLGGSGATMPPPGTR
                     IGAQIVKAFRAGDLETARFWARCYALFPGKWGAYGLPPVMKSAMKHFGVDLGQPCRPY
                     APVSPRDHEQIGQFLRQVGLIGESGPSPQGLLAAGEKLRQEDTFLR"
BASE COUNT          532 a          786 c          764 g          598 t
ORIGIN      
        1 catgaaacac ttcctagtgg gaaatgatgc tatcaataag cagattcgtt tcgacctcag
       61 acactcccgc taaaattcta aaaataacgc cacagccacc atttctcgaa gccgagcttc
      121 gcccagtaga tcgccctaga cggcccccat gtgcgcggat cggtgacacc gaagggcggc
      181 cagccggtgg gatacgtcgt gcggtttgca gcggcgcgtc cagcgccgaa ggcgagtagt
      241 catatggtgt gcagccagag gtctacgggt cgtcccttgc cggtgatctc gacggcgaga
      301 ttatgcgcca gcacttccgc ttcctgatgg gctacgccgc cggccttgga cgccggcagg
      361 tcggcgcaat cgccgatggc gtaaacattg tcccatttgg tttgcagcgt gtcgtagtcg
      421 acgcggatgc cggtttcgct ctcggccaga ccgctatcga gcagcacttg cgccggccgg
      481 tgcggcggca ccataaccag cagatcgtag ggaatgttgt aattgtacag accctggaca
      541 acctttttct ccggttcgat ggaacgcacg acaaactcgt agtgctgctt gatgccgcgc
      601 cgtttgcttt cggcattcat ccacaccgcc ggatcgtgag cctcgccggt cggttccgcc
      661 tcgcgggtga agtagtcgat ctgaacccgg tcgcgaatcc ccttttgacg gaaatatcca
      721 tcgagcatcc actgcgcttc ataaggcgcc ggcgggcatc ggtatggccc gagcggcaca
      781 ccgacgacta ccctgccgcc gcgaaacgac tccaggctcg cgcgcaaacg cagcgctgat
      841 tccatttccc aggggtgctg cgacccttcg gcaaagcccg gaaccaagtc gggacgggtt
      901 tgcaaaccta gcgaagtgat caagtagtcg taattgatct tttctttttc cagcgaaatt
      961 tcctggcgga tcggatcgat gccgagaatc tccgactgaa tgactctgac gttgcgcttc
     1021 tcgattactt tcaaattccg gctgatatcg cgcggttggc gctcgccgat catgatgaac
     1081 agaaacgccg gcatgaaaat atgatcggcg cgccggtcga ttagaatgac atcatgatcg
     1141 tcgccgagct tgcggcccaa atgcgtcgcc gccaccacgc cgccgcagcc gccgcctaat
     1201 atgacaattt tctttcgtcg cgatagaagt tgcatgttga attcttggtt tggcgaaatc
     1261 tacttatctt gagcgccgaa gcgctgtttt gagcgttgcg ccagtccctg gagatttctc
     1321 aggcgctgct cgcgccagag ctgttgctcg cgcctgccgt cggcgttgag ttccttgcca
     1381 aagccggatg acgcccgcaa gaaccagatg attaaagtat cagatagatc ttttagccat
     1441 tccatacatt tctccgcctc acgctccggc tttgcttaac ccagcgtttg gtgactgcgt
     1501 ttgagcttat cttaagaagg tatcttcttg ccggagcttt tcgccggcgg cgagtagccc
     1561 ctgcggcgac ggccccgatt caccgatcag accgacctgg cgcaagaact ggccgatctg
     1621 ctcatggtcg cgcgggctca ccggcgcata aggccggcag ggctggccga gatcgacacc
     1681 gaaatgtttc atcgccgact tcatcaccgg cggcaaacca taggcgcccc atttccctgg
     1741 aaataaggcg tagcagcgcg cccaaaatct ggccgtctcc agatcgccgg cgcgaaacgc
     1801 cttgacgatc tgcgcgccga tgcgcgtccc cggcggcggc atggtggcgc cggagccgcc
     1861 gagcatgagc gtgaccagga gcggctgcat ggtggtaaaa tagtgaccgc ggccggccag
     1921 ctcgatctgc tcgatcaaac gcgaaatctt ggtgatgtcg cgggagcttt ctttgaagta
     1981 gcgaatatta tcgatctcgc tgatcttaac gaaggcatcc tgcggtgggt cggcgcccgg
     2041 acctgggttg tggtaccagg tgaccggcaa ggggctagcc gaggcgactt gagtgtaaaa
     2101 ctccatgagc tcggcgatgg tcggctggcc gccccaggga cgcagcggca tcagcacttg
     2161 aatgaagtcg ccgttcacct tggcggcata ctcggcgagt tcaataacct cgcgcggcgc
     2221 cggactagag cagcccaaga tcaccggcac ccggccgccg atcatttcgg tggcgacttt
     2281 gagcacttcc ttgcgctcat cgcgcgacag catggtgtat tccgctgctt ccaccgccgc
     2341 caccgtgatc gcgtcgcagt cgggaataag aaattcgatt tccttttcga gcgccttata
     2401 atcgacgcga tcattcacgt cgaagggcgt caaacaggcg ccaatgatgc cgctgatagg
     2461 tttggtcgtt gccataagct tatggaggtt ctttagctat ttgtgtggtt cttttgtggg
     2521 gttcagattt ttttgttcac cacgaagggc acgaagggtt ggataattta gtttctgaac
     2581 ttcgtgctct tcgtactact acccttgata attttgccgg gcttgcgcaa atggtccgtg
     2641 cgccaaatcc aagagggcgg gtttcaaacc cgcccctacc
//
LOCUS       DATIRS010000342         2350 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1699168, whole genome shotgun sequence.
ACCESSION   DATIRS010000342 DATIRS010000000
VERSION     DATIRS010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2350)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2350)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2350
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1699168"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..596
                     /locus_tag="VLM90_04260"
     CDS             <1..596
                     /locus_tag="VLM90_04260"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015786.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSQ12202.1"
                     /translation="TVMSTDDRMRWDEQHSKSLGTEQPSAFLREILESDAWMGLGGTA
                     LDIACGKGRNTIYLAQHGFAVTALDISAVALAEGRRRARQQDLLIDWHLCDLEAGALS
                     PAGGGFDLIVNFNYLQRSLIQPMRQAIKPGGHVIFETYLIDQAAVGHPKNPDYLLRHN
                     ELLECFGDFRVLFYREGVFADGAAAAFRAGIFARRIA"
     gene            630..1274
                     /locus_tag="VLM90_04265"
     CDS             630..1274
                     /locus_tag="VLM90_04265"
                     /EC_number="2.5.1.25"
                     /inference="COORDINATES: protein motif:HMM:NF015875.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016432 - tRNA-uridine
                     aminocarboxypropyltransferase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-uridine aminocarboxypropyltransferase"
                     /protein_id="HSQ12203.1"
                     /translation="MNRLTDAAQFRAWCARCRRPGVGCYCALIEPFDSLPRFVILSQP
                     REAKHRLGTGRMAHLGLANSLRFEGIDFSQHPQVNREIAYPGNAPMLLFPSRQAVNLT
                     KLTVTERRQLAPGSRTLVVFVLDGTWKSVRKMMRLSDNLRQLPTICFAPPTPSAYGFR
                     REPRPECYSTIEAIHQVIELFNDAAAASAQPRRHDRLLAPFHFMVASQLAYTPS"
     gene            1513..>2350
                     /locus_tag="VLM90_04270"
     CDS             1513..>2350
                     /locus_tag="VLM90_04270"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HSQ12204.1"
                     /translation="MDFVRTLKTLADPLRLRVLAAVAEEELTVGEVQEVVASMQSSVS
                     RNLAMLREAGFVRDRKEGTSVYFSVRSDMPEPARELFKSLQTKLGDIPEVKKDRARLE
                     ECRRRRLHRSQNYFESVAGDWERIRQSYFDDRVTSLAIEKLLPRNLTLADIGCGTGSL
                     TFELARFARKVIGVDLSGEMLRRARAIAKERELANVEFRQGDVLKLPLESHSLDAAFC
                     VMVLHFLPDPARAIAGLCRVVRPGGSVILVDLVEHKQDWMREQMAHQWLGVDRGSIDG
                     WFR"
BASE COUNT          435 a          698 c          704 g          513 t
ORIGIN      
        1 gaacagttat gtccaccgac gaccgcatgc gctgggacga gcagcattcg aagtcactgg
       61 gtactgaaca gccttcggct tttctccgcg agattcttga aagcgacgct tggatggggc
      121 ttggcgggac ggcgttggac atcgcctgcg gcaagggacg gaacacgatc tatctagcgc
      181 agcacggctt cgccgtgacg gcgttggata tttccgcggt cgctttagcg gaaggccggc
      241 ggcgagcgcg gcagcaagat ctgctcatcg actggcatct ctgcgacttg gaagcgggcg
      301 cgctctcgcc tgctggcggc ggattcgatc ttattgtcaa tttcaactat cttcagcgct
      361 cgctaatcca gccaatgcgg caggcgataa agcccggcgg tcatgtgatc tttgagacct
      421 atctcatcga ccaagccgcg gttgggcatc cgaagaatcc cgattacctg ttacgacata
      481 acgagttgct cgaatgcttt ggcgactttc gcgtattgtt ctatcgcgaa ggggtatttg
      541 ccgacggcgc ggcagcggcc tttcgcgccg gcatattcgc ccggaggatt gcataaccat
      601 tgcgtctcaa acagctcgag caagatagaa tgaatcgatt gaccgatgcg gcgcagttcc
      661 gtgcctggtg tgcgcgttgc cggcggccgg gcgtgggatg ctactgtgcg ctcatcgaac
      721 ccttcgactc gttgccgcgc tttgtcatac tcagtcagcc gcgcgaggcc aagcaccggc
      781 ttggcaccgg ccggatggcg catctgggtc tcgccaattc gctcaggttc gagggtatag
      841 atttctccca acatcctcag gtcaatcgcg agatcgccta tcccggtaac gcgcccatgc
      901 tgctctttcc gagccgccag gcggtcaatc tgacgaaact gacggtcacc gagcgccgac
      961 agctggcccc gggctcgcgc accctggtgg tatttgtttt ggacgggact tggaaaagcg
     1021 tacgcaagat gatgcgcctg agtgacaacc tgcggcaact gccaacgatc tgtttcgcac
     1081 cgccaacacc atcggcctat ggctttcgcc gggaaccgcg gccggagtgc tactctacca
     1141 tcgaggcgat tcatcaagtg atcgaactct tcaacgacgc tgctgctgcc tctgcgcaac
     1201 cgcgccgtca tgaccgcctg ctcgcgccgt ttcacttcat ggtcgctagc caactcgcct
     1261 acacgccgtc gtagcggctt ccattggcgc ggccgccctt tgccgcgctc aggctaagcg
     1321 ttttttctac cggcccgcgg gaaagtatag gataatgccc gttgtcgcgg taggaatttg
     1381 gcgcggactg atcggttagt agattcgcga cacgtcccct acgatgacct gtcctaggcc
     1441 cagggccgat ccggcagcgt tattgtcatc atcacaatat tcgcatataa tcatagatgt
     1501 tgcactgagc ccatggattt cgtacgcaca ctcaaaacct tggccgatcc cttgcgtttg
     1561 cgcgtgctcg cggcggttgc cgaggaagaa ttgaccgtcg gcgaggtgca agaggtagta
     1621 gcatcgatgc agtcgtcggt atcgcgcaac ttggcgatgc tgcgcgaagc gggcttcgtg
     1681 cgggatcgca aggaaggcac cagtgtttac ttttcggtcc gcagcgacat gccggagccg
     1741 gcgcgcgaac tgttcaagtc tcttcaaacc aagctcggtg acatccccga ggtcaaaaaa
     1801 gatcgggcgc gcttggaaga atgccgccgc cgccgcctgc accgttcgca aaattatttc
     1861 gaatcggtgg ccggcgactg ggagcgtatt cgccagagtt acttcgacga ccgcgtaacc
     1921 tcgctggcga tcgagaaact gctgccgcgc aaccttacgt tggccgatat cggttgcggc
     1981 accggcagct tgaccttcga gcttgcccgt ttcgcgcgca aagtcatcgg tgtcgatctc
     2041 tcgggcgaaa tgctgcggcg cgcgcgtgcc atcgccaaag aacgcgagtt ggccaacgtc
     2101 gagtttcgcc agggcgacgt gctcaagcta ccgttagagt cgcacagtct cgatgctgcg
     2161 ttctgcgtga tggtgctcca ttttctgccc gatccggcgc gggcgattgc cggtctttgc
     2221 cgcgtcgtcc ggcccggcgg ctcggtgatt ctcgtcgatt tggtcgaaca caaacaggat
     2281 tggatgcgcg agcaaatggc gcaccagtgg ctcggcgttg accgcggttc cattgacggt
     2341 tggtttcgcg
//
LOCUS       DATIRS010000343         2008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_813988, whole genome shotgun sequence.
ACCESSION   DATIRS010000343 DATIRS010000000
VERSION     DATIRS010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2008
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_813988"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..457
                     /locus_tag="VLM90_04275"
     CDS             <1..457
                     /locus_tag="VLM90_04275"
                     /inference="COORDINATES: protein motif:HMM:NF039581.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12205.1"
                     /translation="EPYLDLRYAGQGYELTVPSPMPPYTQHDLTIMRGRFDTIHEQNS
                     GHKAESEPVELVSLRLISLGLVPQAKLSPGKVTGRKIAAAQLGERKVYFGKEHGVLTT
                     QVYNRDLFEPGHHITGPAIVEQLDTTTVIQPEQEAAVDEYRNIIIKKKS"
     gene            570..>2008
                     /locus_tag="VLM90_04280"
     CDS             570..>2008
                     /locus_tag="VLM90_04280"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HSQ12206.1"
                     /translation="MSNVDPVTLQVIQARLAGIVQEMQNSLFRTGYSTIIRESQDASC
                     ALLNRQGEVVAQHVVLPLHMGAFPACAAGILKNYTPDEVHEGDAFITNHPYLGGSPHA
                     PDMAVLSPIFFHGEWVGFAANLAHKSDIGGPVPGSCWSQAREIYQEGLHVPPIKFVHK
                     LQISKDIEAMLGANSRTPELVIGDLRGQVGAARLGERRFQELMERYGKETILQSFEEL
                     FALTEAKVRAEIASWPDGEGTGERFVDSDGIDLDKPVRLHVRMEKKGDRLLFDFTGCA
                     DQTKGPANIRPTIVRAACAYLLTCLVDPALPINYGLARCIEIKVRDGSVVNPIFPAPV
                     NTYNPTVHALVESLLEASSRITPHKKVGDGCSSRSIIIGGRSNKTGKGYVQYEIFGGG
                     SGGRSGKDGVSGTNVNQSNAKIAPIEIIESEFATRLKRFELIADSGGAGKFRGGLGFV
                     REYEVLDNDARFSLRSTKHDIAPKGIDGGA"
BASE COUNT          444 a          624 c          569 g          371 t
ORIGIN      
        1 cgagccctat ctcgatctgc gctacgccgg ccagggctac gagctcaccg tcccctcgcc
       61 gatgccgcca tacacccagc atgatctgac catcatgcgc ggccgtttcg acaccattca
      121 cgagcagaac tccggtcata aagccgagag tgaaccggtg gagctggtga gcttgcgctt
      181 gatttccctc ggcttggtgc cacaggccaa actgtctccc ggcaaagtca cgggacgaaa
      241 aattgcagca gcacaactcg gcgagcgcaa agtttatttc ggcaaagagc atggtgtgct
      301 caccacccag gtctacaacc gcgacctgtt cgagcccggc caccacatca ccgggcccgc
      361 catcgtcgag caattggaca ccacgacggt aattcaaccc gaacaagaag cggccgtgga
      421 tgagtatcgg aatatcatca tcaaaaaaaa gtcatgatcg actccggcga cttgaacgtt
      481 ttgaacgttt tgaccggctg gaacctcagt gcggcgcgtc gttcaaatcg ttcaagtcgt
      541 tcaagcagtt caaaacgtta tgaggaatta tgtccaacgt agatccggta actctgcaag
      601 tcatccaagc gcgtctcgcc ggcatcgtcc aggagatgca aaactcctta tttcgcaccg
      661 gctactcgac gatcattcgc gagtcgcaag acgccagctg cgcgctgctc aatcgccaag
      721 gcgaagtggt cgcgcaacat gtcgtcctgc cgctccacat gggcgccttt cccgcctgcg
      781 ccgcgggtat cttgaaaaat tatacgcccg acgaagtgca cgaaggcgac gccttcatca
      841 ccaaccatcc gtatctcggc ggcagtcccc atgctcccga catggcggtg ttgtcaccga
      901 tattttttca cggcgagtgg gtcggcttcg cggcgaatct ggcgcacaag agcgacatcg
      961 gcgggccggt gccgggcagc tgttggagcc aggcgcggga gatttaccag gaagggctgc
     1021 atgtcccgcc gatcaagttc gtgcataaat tgcagatcag caaggacatc gaagccatgc
     1081 tcggcgccaa tagccgcacg ccggaattag tcatcggcga tctgcgcggc caggttggcg
     1141 cggcgcgcct gggcgaacgg cgctttcaag aactgatgga gcgctacggc aaggagacga
     1201 ttttacaatc cttcgaagaa ctattcgcct tgaccgaagc gaaagtccgc gccgagatcg
     1261 cctcctggcc cgatggcgag ggcacaggcg agcgcttcgt cgacagcgac ggcatcgacc
     1321 tcgacaaacc ggtgcgtttg catgtgcgca tggagaaaaa aggcgaccgg ctgctgtttg
     1381 atttcaccgg ctgcgccgac cagaccaaag gaccggccaa cattcgcccg accatcgtgc
     1441 gcgccgcctg cgcctatctg ctcacctgtc tggtcgatcc agcgctgccg atcaattacg
     1501 gtctagcccg ttgcatcgaa atcaaagtgc gcgacggcag cgtggtcaat ccaatcttcc
     1561 ccgcgccggt gaatacctac aatcccacgg tccacgccct ggtcgagtcg ctcctcgaag
     1621 cgtcgagccg gatcacgccg cataaaaaag tcggtgacgg ctgcagcagc cgctcgatca
     1681 tcatcggcgg ccgcagcaac aagaccggca agggttatgt gcaatatgaa atcttcggcg
     1741 gcggctccgg cgggcgcagc ggcaaggacg gcgtgtcggg caccaacgtc aatcaatcga
     1801 atgcgaaaat cgcgccgatt gaaatcatcg agtcggaatt tgccacccgg ttgaaacgtt
     1861 tcgagctcat cgccgactcc ggcggcgccg gcaagttccg cggcggtttg ggatttgtcc
     1921 gcgagtatga agtgctcgac aacgacgcgc gcttttccct gcgctcgact aaacacgaca
     1981 tcgcgcccaa gggcatcgac ggcggcgc
//
LOCUS       DATIRS010000344         5355 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1699387, whole genome shotgun sequence.
ACCESSION   DATIRS010000344 DATIRS010000000
VERSION     DATIRS010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 5355)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5355)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5355
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1699387"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..912
                     /gene="argC"
                     /locus_tag="VLM90_04285"
     CDS             <1..912
                     /gene="argC"
                     /locus_tag="VLM90_04285"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: protein motif:HMM:TIGR01851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HSQ12207.1"
                     /translation="LRIRDWLTGRNDLEVITLPEELRKDPAARKKALQDATIVLLCLP
                     DDAAKEAAAWLADSPVRILDASTAHRVSDHWVYGLPELTAGQREKIAKAKRVANPGCY
                     ASAVILLTRPLIDADLIAADTPLAIHALSGYSGGGRALIERWENPKKKLISLPHEAPY
                     SIGKLHKHIPEIMRHGKLTTEPQFLPNVGPFRCGMRVQIMLPANSLPKAGSAKAMWEA
                     LAARYDKEPFIEVEPLTDASESDETSFDPQEFNDTNRISLRILPHQSGHVILMARLDN
                     LGKGAAGVAIQNLNLMLGVPEGTGVPH"
     gene            complement(1327..2565)
                     /locus_tag="VLM90_04290"
     CDS             complement(1327..2565)
                     /locus_tag="VLM90_04290"
                     /inference="COORDINATES: protein motif:HMM:NF015764.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12208.1"
                     /translation="MWHSIPLTLFWFAYFGSLGVFYPYFALYLRENAGLTGTQVGMVL
                     AISPLIGMIAQPFWGQVADRTGARTRVLAFLTLGTALGYLGLGAATSFQSILLATSAL
                     ALVGTAVFPLMTSVSLAILRDSGRHAFGRVRGWGTIGYFILVLVFPWALTVYQPPVQS
                     AVAAANVSQPGMGLMFPLTASLVLIAALIAFLLPQKGAVGLRAERGDWRELLRNRAFF
                     RFLCFSLLGHFLMHGPMWLFPIFIRSRGGDLTTIRNMWILMLIVEVPLVFLTGSGLKR
                     LGARGLLTVGVTVGGLRWILSALITDPMILFAVQALHGVMVVGFNLGSPLYLDVVAPE
                     KLRSTAQGILSKVGSGLAGILSNLTAGWMVDHSGVNVLYLWCGIGSLTLGIFSYWILP
                     YVGRRQEAPKEIVLATETIT"
     gene            2856..4226
                     /locus_tag="VLM90_04295"
     CDS             2856..4226
                     /locus_tag="VLM90_04295"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSQ12209.1"
                     /translation="MGSNTSPSGIKLRVLVIDDEKNIRTTLAFCLEQAGCQVTAVASA
                     DGAFDALSQQAYDLAFLDVRLGQSSGLDLIPKLIAVCPNLMVVIVTAYATVDSAVEAI
                     KRGAADYLAKPFTPEQIRHLVDQSVKQRDIKRQLTELEGRLREAAPETDLESDSPKVR
                     AVFEIATKVAASDAPVLLRGESGTGKSVLARWIHSLSPRNRQPFVVVNCPTLSEELLA
                     SELFGHAKGAFTGAVRDQPGRVEAAEGGTLFLDEIGDISPSLQAKLLRFIEEKEFDRL
                     GENKTRHADVRTLAATNRDLEELMRQGLFREDLLYRLNVIELELPPLRERPEDILRLA
                     QRFLLFFARSARRQPPELSQAAQVALTSYNWPGNVRELRNTVERAVILWPAQVIEPQA
                     FPAHIAAQVKSAEAPHVGGNFSLEDIEREHIARVVGRSPTLDDAAAVLGIDSSTLWRK
                     RKKYES"
     gene            complement(4234..4875)
                     /locus_tag="VLM90_04300"
     CDS             complement(4234..4875)
                     /locus_tag="VLM90_04300"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSQ12210.1"
                     /translation="MIESKSRILVADDERNIRKNLAMVLEAAGYLVDVAKDGNEALDL
                     CKINHPDIAFVDLHMPKLAGLEVLAHIRALSPKTAVVIITAYGSATNAVQAMKLGAVE
                     FLEKPFDPKVIGLLAEEILFRQRLGSGVSFDDLMHLAELARERKANIEARAYLKAAMS
                     RALDRPEPYYWLAFLCESEGDEKRAVQYYYMAITADHSYEAATAALKRLGKLH"
     gene            complement(4872..>5355)
                     /locus_tag="VLM90_04305"
     CDS             complement(4872..>5355)
                     /locus_tag="VLM90_04305"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSQ12211.1"
                     /translation="YPLPAHVSGLMMGAVDEFKADADAKGVLLTAEVSPHELSVLADH
                     DRIRHVFSNLIGNAVRHTPKGGSITLGAEGVDDSVRFTVADTGTGIPKEYQERIFEKF
                     YRVPESGPKGTGLGLYIAKEIVRAHGGEIGVESEPGKGSRFWFTLPSASKTASKGMLP
                     "
BASE COUNT         1244 a         1630 c         1459 g         1022 t
ORIGIN      
        1 ctgcgcattc gcgactggct cacaggccgc aacgatctcg aagtcatcac actccctgaa
       61 gaactgcgca aagaccctgc ggcgcgaaaa aaggcgctgc aagacgcgac catcgtgctc
      121 ctttgccttc ccgacgacgc agcgaaggaa gccgcggcat ggcttgccga ctcgccggtg
      181 cgcatactcg acgccagcac ggcgcaccgg gtcagtgacc actgggttta tggtttgcca
      241 gaattgactg ccggccagcg ggagaagatt gccaaggcga aacgggtggc gaatccgggc
      301 tgctatgcat ccgctgtaat cttgctaacc cggccgctca tcgatgcgga tttgatcgcc
      361 gccgacacgc cgctggcgat ccacgcgctg tcaggttact caggcggcgg ccgcgcgttg
      421 attgagcgct gggaaaatcc gaagaagaaa ttaatcagtc taccccacga ggcgccctac
      481 agtatcggca aactgcacaa gcatatcccg gagatcatgc gccacggcaa attgaccact
      541 gaaccgcagt ttctccccaa cgtcgggccg tttcgctgcg gcatgcgtgt gcaaattatg
      601 cttccggcga attcattgcc gaaagccgga tcggccaaag cgatgtggga agcattggcc
      661 gcgcgttacg acaaagaacc tttcattgag gtcgaaccgc tcaccgacgc cagcgagagt
      721 gacgaaacga gcttcgatcc gcaagaattt aacgatacca atcgcatttc gctgcgcatc
      781 ctgccgcatc agtcaggcca cgtcattctg atggcgcgcc tggacaatct cggcaagggc
      841 gccgccggcg tggcgattca gaatttgaat ctcatgctcg gtgttccaga aggcacagga
      901 gtgccgcatt gagcgtcgta atccaaacct aagctatcgg ttcgcatgat ccccctttga
      961 aaactgatcg ttatccataa gtctcggctg gacacggcgg gtgttgtaag tacaacaagt
     1021 tttgctcaac cgctcaatac gggggaattt ctctgttacc cctctttgga aaagaggggc
     1081 caggggagat tttatttctt ccatgcggct ccaccgtcgc agaggtttgc cgatctgctg
     1141 tgacaaaacc tccccacacc acaatcaaat cccccttaat cccccttttc caaaggggga
     1201 atctgtcatc gctagcgatt catttcgtca gctccgcgtc cagccaataa ggtatctgtc
     1261 gcacaatcaa ttttgaaaag agggggatgt catgaggtgt tagtatcgta attttgagtc
     1321 agcacgttaa gtaatcgtct ccgtcgcgag aacgatttcc ttgggcgcct cttgccggcg
     1381 tccgacatac ggcagaatcc agtagctgaa gattcccagc gtcaacgagc cgatgccgca
     1441 ccagagatag agcacattga caccgctgtg atcgaccatc cagccggccg tcagattgga
     1501 taaaatgccg gccaaaccgc tgccgacctt ggatagtatg ccttgtgccg tcgagcgcaa
     1561 tttctccggc gcgacgacat ccaagtagag cggactgccg aggttgaagc cgacgaccat
     1621 gacgccatgc agcgcctgga cggcgaacaa aatcatcggg tcggtaatca gcgccgacag
     1681 gatccaacgc aggccgccca cggtcacgcc gacggttaac agaccgcgcg cgcccaaccg
     1741 cttcagcccg ctgccggtga gaaagaccaa cggcacttcg acgatcagca tgagaatcca
     1801 catgttgcgg atcgtcgtca aatcgccgcc gcgggagcgg ataaagattg ggaacaacca
     1861 catcggccca tgcatgagga agtggccaag cagggaaaaa cagagaaagc gaaaaaaggc
     1921 ccgattgcgc aacagctcgc gccagtcgcc gcgctcggca cgcaatccca ccgcgccttt
     1981 ttgcggcaac agaaatgcaa tcagcgccgc gatcaacacc aaggacgcgg tcagcggaaa
     2041 catcaagccc atgcccggtt gtgatacgtt cgcggcggca acggcggatt gcaccggcgg
     2101 ctgatacacg gtgagcgccc aaggaaagac cagaaccaga atgaagtaac cgatggtgcc
     2161 ccagccgcgc acccggccga acgcatggcg cccggaatcg cgcaagatcg ccaggcttac
     2221 cgaagtcatc agtggaaaca ccgccgtgcc gaccagggcc agcgccgagg tcgccagcaa
     2281 gattgactga aaactggtcg ccgcgccgag accgagatag cccagcgccg tccccagcgt
     2341 gagaaacgcc aacacccgcg tgcgcgcgcc ggtgcggtct gctacctgcc cccaaaacgg
     2401 ttgagcgatc atgccgatca acggcgagat cgccaacacc atgccgactt gagtgccggt
     2461 caaaccggcg ttctcacgga gatagagagc aaagtaagga tagaaaacac ccagagagcc
     2521 gaaataggca aaccagaaaa gcgtcagcgg gatcgaatgc cacattcgcc aatgatagca
     2581 ttcataaacg tcgtctacga cgccggttcc aatagttcca gacgttccaa tcggtcaacg
     2641 ggcggattcc gaataacatc tggaaccttt ggaacccatg gaacgtttgg aacgcgagag
     2701 aagcgagccc aaatgaactg cgaaggaaac ctaaccgtcc acaccatagc ccactccacg
     2761 cggtcgatcg aagaactatt ggtgtttcgt cttcagactt tgtcgcttgc atcgacgccg
     2821 ccgcggtagc atagtgcgcc caacagggcg acaccgtggg ctctaacact tcaccatccg
     2881 gcataaagct tcgcgtgctc gtcatcgatg acgaaaaaaa tattcgtacc acccttgcgt
     2941 tttgtctcga acaagccggc tgtcaggtaa ctgcggtagc gtctgccgac ggcgcctttg
     3001 acgcgctcag ccaacaagct tacgatttag cgttcctcga tgtccgtctc ggccaatcga
     3061 gcggtctcga tctgattccg aaacttatcg ccgtttgtcc taacctgatg gtggtgatag
     3121 tgaccgccta cgcaaccgtc gacagcgccg tcgaagcgat caaacgcggc gccgccgact
     3181 atctcgccaa gccattcacc ccggagcaga ttcgccacct cgtcgatcag agcgtcaaac
     3241 aacgcgatat aaaaagacaa ctcaccgagc tggaaggccg cctgcgcgag gccgcgccgg
     3301 aaaccgatct ggaatccgac tcgcctaaag tccgcgcggt atttgaaatc gccacgaaag
     3361 tagccgcatc agacgcgccg gttttgcttc gcggcgagag cggcaccggc aagagcgtgc
     3421 tcgcccgctg gattcattcg ctgagtccgc gcaatcggca accgttcgtt gtggtcaatt
     3481 gcccgacctt atccgaggag ttgctcgcca gcgaactgtt cggccacgca aagggggcct
     3541 tcaccggcgc cgtgcgcgat cagccagggc gtgtcgaggc cgccgagggg gggacgctat
     3601 ttctcgatga gatcggcgac atctcgccgt ccctgcaagc taagctattg cgtttcatcg
     3661 aggaaaagga attcgatcgg ctcggcgaaa acaaaaccag gcacgccgac gttcgcaccc
     3721 ttgccgccac caaccgtgat cttgaagagt tgatgcgcca gggattgttt cgcgaagatc
     3781 tgctctaccg tctaaacgtg atcgaattgg agttgccgcc actgcgggaa cggcccgaag
     3841 atatcctgcg tctggcgcag cgctttctat tgttcttcgc gcgctcggcg cgacgccagc
     3901 cgccggagtt atcgcaagcg gcgcaagttg ccctcacgtc ttacaactgg cccggcaatg
     3961 tacgcgagct cagaaacacc gttgaacgag cggtgatact ttggcccgcc caggtgatcg
     4021 agccgcaagc ctttcccgcg cacattgccg cgcaggttaa gtcagccgaa gcgccgcacg
     4081 tcggtggaaa cttctccttg gaggacatcg agcgcgaaca tatcgctcgc gtcgtcggcc
     4141 gctcgccgac cttggacgac gcggcggcag ttctcggcat tgatagttcg acgctttggc
     4201 gcaaacgaaa gaagtacgaa agttgaatct gcatcaatgc agcttgccga gccgcttcaa
     4261 ggcggcggtc gcggcttcat aggaatggtc cgcggtgatc gccatataat aatactgaac
     4321 ggcgcgcttt tcgtcccctt cgctctcgca cagaaaggcc aaccaatagt aaggctccgg
     4381 ccgatcaagc gcccgtgaca tcgccgcctt gagataagca cgcgcttcga tgttggcctt
     4441 gcgctcgcgc gcgagttccg ccaagtgcat gagatcatcg aatgacacgc ccgatcccag
     4501 ccgctggcgg aaaagaattt cctccgccaa tagcccaatc actttcgggt cgaagggctt
     4561 ctccaagaat tccaccgcgc cgagcttcat ggcttgcacg gcgttggtcg ccgaaccata
     4621 ggcggtaata atcaccaccg ctgtcttggg actgagagcg cggatatgcg caagcacctc
     4681 gagccctgcc aacttcggca tgtgaagatc gacaaaagcg atgtccggat ggttaatttt
     4741 gcacagatcc aaggcttcgt taccgtcctt ggccacatcg accagataac ccgctgcctc
     4801 caggaccatc gccaagtttt tgcgaatatt ccgttcgtcg tcggccacca gtatccgcga
     4861 cttcgattct atcatgggag cattcccttc gaggcggttt ttgacgctga gggcaaggta
     4921 aaccaaaagc ggctcccctt tccgggctcg ctttccacac caatttcacc gccgtgggcg
     4981 cggacaattt ccttggcaat ataaagtcct aggccggtac ccttcggtcc cgattccggg
     5041 actcgataaa atttttcaaa gattcgctct tggtattcct tgggaattcc cgtaccggta
     5101 tcggctacag taaaacgcac ggaatcgtcg acgccttccg cacctaacgt gatactcccg
     5161 cccttcggcg tatgccgcac cgcattgccg atcagattgg aaaacacatg gcggatacga
     5221 tcgtgatccg ctagcacgct caactcatgc ggcgatactt ccgcggtcag gagcacgcct
     5281 ttggcatcag catcggcttt aaactcatcg acggcgccca tcatgagacc ggatacgtgg
     5341 gcaggcaacg gatac
//
LOCUS       DATIRS010000345         1533 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_224230, whole genome shotgun sequence.
ACCESSION   DATIRS010000345 DATIRS010000000
VERSION     DATIRS010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1533
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_224230"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            72..1499
                     /locus_tag="VLM90_04310"
     CDS             72..1499
                     /locus_tag="VLM90_04310"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ12212.1"
                     /translation="MLYADLRGWISEVENFGELKRVPGVDWDLEMGALTEVYARNEPY
                     PAILFDEIKDYPAGHRVLVGVHHQSLKRQCLTTHLPLDYGRNEFIQAWKERLNNQKFI
                     PPRVVQTGPVMENVFEGKDIDLLSLPVPRWHEEDGGRYLGTAHLVISRDIDEGWVNLG
                     CYRVMVHDRDTLALYISPGKHGRIMRQKYFDQGKPFPVAISFGDDPLLLMTAANHMPW
                     GKSEYDYAGGIRGDAVDVILGKHTGLPIPAYSEITIEGEVLPSEQKREGPYGEWTGYY
                     ASGERTEPILKVKRLMHRTNPIITAAPSSRPPGGADDGLLRSAFIWDHMDKAGVPDVR
                     GVGCYQGRFFTAVSIKQRYPGHAKQAAMIAAQCQTGAYLGRYVVVVDDDIDVYDMNDV
                     LWAMCTRVDPAADTDFIRRAWSGPLDPIIPKDQKGFSTRAIIDATKPYEWGKDFPKAS
                     AASEELKRKVAEKYGTHFSRKYSLG"
BASE COUNT          354 a          447 c          436 g          296 t
ORIGIN      
        1 ctcttgaaat aggagtcctc gttggagttg aatgggagta gaagacaact tagtcaccgg
       61 gaaggataac gatgctttac gcagatttac gcggttggat ttctgaagtc gaaaatttcg
      121 gcgagttgaa gcgcgtgccc ggcgtcgact gggatttgga aatgggcgcg ctaacggaag
      181 tatacgcgcg caacgagccc taccccgcca ttcttttcga cgagatcaag gactatcccg
      241 ccggccaccg ggtgctcgtc ggcgtgcatc atcagtcgtt gaaacggcaa tgtctcacca
      301 ctcatctgcc tctcgactac ggccgtaatg agttcataca agcgtggaaa gaacggctca
      361 acaatcagaa gttcataccg ccgcgcgtcg tccaaaccgg gccggtgatg gaaaacgttt
      421 tcgaaggcaa agacatcgat ctcctctctc tgcctgtgcc gcgttggcac gaagaggacg
      481 gtggcagata tctcggcacg gcgcatctag tcatctcgcg cgatatcgac gagggttggg
      541 tcaaccttgg ctgttatcgc gtcatggtgc acgaccgcga caccctggcg ctctacatct
      601 caccgggaaa acatggccgc atcatgcggc aaaaatattt cgaccagggt aagccgtttc
      661 cggtcgccat cagcttcggc gacgacccgc tgctgctcat gaccgcggcc aatcacatgc
      721 cgtggggcaa atccgagtac gactacgccg gcggcatacg gggcgatgct gtggacgtca
      781 ttctcggcaa acatacggga ctgccaatcc cagcctactc cgaaattacc attgaaggcg
      841 aagtcctgcc atccgaacag aaacgcgagg gaccgtacgg cgaatggacc ggctactacg
      901 ccagcggcga gcgcacggaa ccaattctga aagttaagcg tttgatgcac aggacgaatc
      961 cgattatcac ggcggcgccc tcgtctcgtc ctcccggcgg cgccgacgac ggcctgctcc
     1021 gctcggcatt tatctgggac catatggaca aagccggcgt gcccgatgtg cgcggcgtcg
     1081 gctgctacca gggtagattt ttcactgcgg tttcgatcaa gcaacgctac cccggccacg
     1141 ccaagcaagc cgcgatgatc gccgcgcagt gccaaaccgg cgcctatctc ggccgctatg
     1201 tcgtggtcgt cgacgatgat atcgacgttt atgacatgaa cgatgttctc tgggccatgt
     1261 gtacgcgcgt cgaccccgcg gcggacactg acttcatccg ccgcgcttgg agcggccccc
     1321 tcgacccgat cattcccaag gatcaaaaag gcttcagcac gcgcgccatt atagacgcca
     1381 ccaagcccta cgagtgggga aaggattttc ccaaggcctc ggcggcaagc gaagagctaa
     1441 agaggaaggt ggcggagaag tacggcacgc actttagccg gaaatattca cttggttagc
     1501 ataacctggg aacgatgaac ctaaagaaga cat
//
LOCUS       DATIRS010000346         1860 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1404396, whole genome shotgun sequence.
ACCESSION   DATIRS010000346 DATIRS010000000
VERSION     DATIRS010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1860)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1860)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1860
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1404396"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..704)
                     /locus_tag="VLM90_04315"
     CDS             complement(<1..704)
                     /locus_tag="VLM90_04315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12213.1"
                     /translation="MINGYKIFDADAHVMMGPKMWEDLPKEYAPRRPRPLELADNAGV
                     GIRRTGWLIEGRMEPHAYGPGAQGANTPTTVMAEFGAAPSTLGSLDISEPDKRLRDLD
                     ILGIDAQLLFPSSLYACMGADPFFEAAMFRAYNRYAGRQCRVNSKRLKWAGLLPLRDS
                     REAIEALREMQELGASTAVVFGTVGERLLSHKSFTPIWDEFARTGLPLCVHMGRSYPP
                     FDQLVETRLEAHVIAMG"
     gene            complement(797..>1860)
                     /locus_tag="VLM90_04320"
     CDS             complement(797..>1860)
                     /locus_tag="VLM90_04320"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ12214.1"
                     /translation="HWHELDGGRYIGTADCVITGEPEEGGWVNVGIYRVQIHDKNTLG
                     LYVSPGHHARIMREKYWEQGKSCPVVVTFGQDPLLFLVAGQSMPYGLSEFDYYGGLRG
                     APIDVIRGELTGLPIPAHAEIAIEGEVPPPQEQMQMEGPFGEWPGYYAHGAAKEPVIR
                     VKRVYYRNEPILCGAPPLKPPFVTFGVPIGAAAIWNYLEKADVPDIKGVWCAIGSSAA
                     AGGAPFIIVSVKQRYHGHAQQAGLAALASRGGNYHGRFVIVVDDDIDPSDMKDVIWAV
                     STRCDPKTAISIIDGCWSTPLDPAMHPDQCDAGNFVNSRAVLNACRPYAWRDRFPPVN
                     ALSPELKQKITEKWKNELA"
BASE COUNT          351 a          539 c          591 g          379 t
ORIGIN      
        1 cccatggcga tgacatgggc ttccagtctg gtctccacta attgatcgaa gggcgggtag
       61 ctgcggccca tatgtacgca caacggtaaa ccggtgcggg cgaattcgtc ccagattggc
      121 gtgaaactct tgtgcgatag cagccgctcg ccgacggtgc cgaacaccac ggcggtgctg
      181 gcgccgagtt cctgcatttc acggagcgcc tcgatggcct cacggctatc gcgcagcggt
      241 agtagaccag cccacttcaa gcgtttcgaa ttgactctgc actggcgacc ggcgtagcgg
      301 ttataagcgc gaaacatcgc ggcttcgaaa aatggatcgg cgcccatgca ggcgtaaaga
      361 ctcgatggga agagtagctg cgcgtcgatg ccgaggatgt cgagatcgcg cagacgtttg
      421 tcgggttcgg aaatatccag cgagcccagg gtggatggcg cggcgccgaa ttccgccatt
      481 accgtagttg gcgtattggc gccttgggcg ccggggccgt aggcgtgggg ttccatgcgt
      541 ccttcgatga gccaaccggt gcggcgaatt cccacacccg cgttgtcggc aagttctaac
      601 ggccttggcc ggcgcggcgc atattccttg ggtaaatctt cccacatctt tgggcccatc
      661 atcacatggg cgtcggcgtc aaagatttta tatccattga tcatggtaac cactccacga
      721 ttagctaatg gcgcgacacc cgtgggccac atcagggaca gcagcagcgg cggcgcgtta
      781 aagagccggg gtatttttac gccagttcat ttttccattt ttcggtgatc ttctgtttaa
      841 gctcagggct gagcgcgttg accggcggga agcggtcgcg ccaggcgtag ggacggcaag
      901 cgttgagcac cgcccggctg ttgacgaagt tgccggcgtc gcattggtcg gggtgcattg
      961 ccggatcgag cggcgtgctc cagcagccgt cgatgatgct gatggcggtc ttgggatcgc
     1021 agcgggtcga taccgcccag atcacatctt tcatatcgga cggatcgata tcgtcatcga
     1081 cgacgatgac gaagcggcca tgatagttgc cgccgcgtga ggccagcgcg gcgagtcctg
     1141 cctgttgcgc gtggccgtga tagcgctgct tcaccgagac gatgataaac ggcgcaccgc
     1201 cggcggccgc cgagctgccg atggcacacc agaccccctt gatgtccggg acatcggctt
     1261 tttccaaata gttccagatc gccgcggcgc cgatgggcac gccgaaagtg acgaagggcg
     1321 gtttcagcgg cggcgcgcca cataggatcg gctcgttgcg atagtagact ctcttgaccc
     1381 ggatcaccgg ttctttggcc gcgccatggg cgtagtaacc gggccactcg ccgaacggac
     1441 cttccatctg catctgttct tgcggcggcg gcacttcgcc ttcaatggcg atctcggcgt
     1501 gggcgggaat cggcaagccg gtgagctcgc cgcgaatcac gtcgatcggc gcgccgcgca
     1561 ggccgccgta ataatcgaac tcggacaggc cgtaaggcat cgattgtcca gcgactaaaa
     1621 atagcagtgg gtcttggccg aaggtaacca ccaccggaca gcttttaccc tgctcccaat
     1681 atttctcgcg catgatgcgt gcatgatggc ccggtgagac ataaaggccg agggtgttct
     1741 tgtcgtgaat ctgcacgcga tagatgccga cattgaccca gccgccttct tcgggttcgc
     1801 cggtaatgac gcaatcagcg gtgccgatgt agcggccgcc gtcgagttca tgccagtggg
//
LOCUS       DATIRS010000347         2850 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_617874, whole genome shotgun sequence.
ACCESSION   DATIRS010000347 DATIRS010000000
VERSION     DATIRS010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2850)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2850)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2850
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_617874"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            114..1034
                     /locus_tag="VLM90_04325"
     CDS             114..1034
                     /locus_tag="VLM90_04325"
                     /inference="COORDINATES: protein motif:HMM:TIGR00367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0098662 - inorganic cation transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium/sodium antiporter"
                     /protein_id="HSQ12215.1"
                     /translation="MPDYLTLALGAALAAVGGELFIRGAVGLAHWARVSPGIIASTVV
                     AFATSSPELAVSISSALAGKPQISLGDALGSNVVNVALILASAVAISGIQTPRWSLTR
                     DFPVALLIPVITLVLLLDGVLSRIDGCLLMGMFTAWLIAVIIDARKQRSSADKIPGEQ
                     RGMLAAILSIAGLVCLIAAGRLVVNGAKGIAIAFGLDEFTIGATVVAVGTSLPELATT
                     IIAKLRGHDEVGVGTILGSNIFNGLLIVGVAAIIHPIAVGWREVAGVLIFGMLAVALT
                     FPNGRGFIERRRGLLMLALYAAFLITVLQR"
     gene            complement(1095..>2850)
                     /locus_tag="VLM90_04330"
     CDS             complement(1095..>2850)
                     /locus_tag="VLM90_04330"
                     /inference="COORDINATES: protein motif:HMM:NF009310.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Na(+)/H(+) antiporter subunit D"
                     /protein_id="HSQ12216.1"
                     /translation="ELMPAAPLLIGALLLPIVPRRLRPVLFVLASALGFGLLTHLSAS
                     AVLTWPLLNYELMISRVDRLSLAFGYVFTLAAFLGAIYGFHLRDLGQQVAALLYAGAG
                     LGVVFAGDWLTLYVFWEIMAMASVWLILSARTGLSTRAALRYLLMHLFGGAVLLAGIL
                     WHIQDTASLSFEPLPVSGAGWLILLGFAVNAAIPPLHAWIADSYPEATPTGSVFLSAF
                     TTKAAVYVLARAFPGAELLLIAGTAMALYGVIFAVIENDIRRILSYHIVSQVGYMIAG
                     IGLGTETALNGATAHAFAHILYKGLLFMATGAVIQATGRRRLSELGGLNGPLRWVLVF
                     YMFGALSISGLPLLSGFVSKSLVIHAAELEHRGWVVLLLSVASVGTFGSIGLKLPYFT
                     WFGSRRPIKTDAIPCGMYLAMALASAINLTLGLWPGLLYGVMPFNVTYQPYTAAHLLE
                     SVELLGFTALAVWFFRAQMTAKTALTLDVDWFYRHPAPSLRRWFVDAVNDLFAAAESM
                     VLICVDQVTKLAANPMALRPKLHSYFRPENAAEKGGSDRSYDPDRYRPAIALPLLITL
                     ASFVLLLGWYLISEIRRG"
BASE COUNT          655 a          822 c          837 g          536 t
ORIGIN      
        1 ctcggctgat tgtgccaata atttctatga tatactcgga acaagtgcct ctctaggttt
       61 gatctgctga gctcgatcga tggggctgct ccgaaatcca tcgctgccaa tctatgccgg
      121 attatctgac gcttgcatta ggggcggccc tggccgcggt tggaggtgaa ctctttatcc
      181 gcggggccgt tggcctggcc cattgggccc gggtttcgcc tggaattatc gccagcaccg
      241 tggtggcgtt cgctacctcc agccccgagt tagctgtttc gatcagctcc gcgctcgcag
      301 gaaaaccgca gatctcactt ggcgacgcct tgggaagtaa cgtggtgaac gtcgcactca
      361 tactcgcctc tgcggtcgct atatcgggta ttcaaacgcc gcgctggagt ctcacccggg
      421 actttccggt ggccctgtta attccagtga tcaccctggt cttgctgtta gatggagtgc
      481 tttctcgcat tgacggttgt ttgctgatgg gaatgttcac cgcttggtta atcgccgtca
      541 tcatcgacgc ccgcaaacaa cgaagctcag ccgacaaaat cccaggggag cagcgcggta
      601 tgcttgcggc aatcttgagc atcgctggcc ttgtctgcct aatcgcagcc ggtcgtctcg
      661 tagtcaatgg agccaaaggg attgctattg ccttcggtct cgacgaattc accatcggcg
      721 ccacggtggt tgcggtggga acttcgctcc cggaattagc gaccacgatc attgccaaac
      781 ttcgtggcca tgacgaagtc ggcgtcggca ccatactcgg cagcaacatt ttcaatggtc
      841 tgttaatcgt tggcgtcgca gcgatcatcc atcccatcgc cgtaggttgg cgggaagtcg
      901 ctggcgtcct aatcttcggt atgctggctg tcgcgcttac cttcccaaac ggtcgtggtt
      961 tcatcgagcg aaggcgtggc cttttaatgc tagcgcttta cgccgccttt ctgatcacgg
     1021 tcctccagcg ctaagcatcg ttagcgcacg acgcgagcag ggagcgtcgt ggaacgctgg
     1081 atttgagccg aaatttaacc gcgccggatc tcgctgatga ggtaccaccc cagtaacaaa
     1141 acgaacgaag cgagagtgat cagtagaggg agggcgatgg ccgggcggta acggtcggga
     1201 tcgtagctcc gatcagaacc gcccttttcc gcggcatttt caggccgaaa ataagaatgg
     1261 agttttggcc tcaacgccat tgggttggcg gcgagtttcg ttacttgatc aacgcagatt
     1321 aacaccatgc tttcggccgc cgcgaacaaa tcgttgaccg catcgacgaa ccagcggcgc
     1381 agtgacggcg ccggatggcg gtaaaaccaa tcgacatcga gcgtgagtgc cgtcttagcc
     1441 gtcatctgtg ctcggaaaaa ccaaaccgcc aaggcggtga agccgagcaa ctcaacggat
     1501 tccaacagat gcgccgccgt gtacggctgg taggtgacgt taaagggcat cacgccgtac
     1561 aagagccccg gccataagcc gagcgtcaga ttaatcgcgc tggcgagcgc catcgcgagg
     1621 tacataccgc agggaatcgc atcggtctta atcggccgcc gcgaaccgaa ccaggtaaaa
     1681 tagggcagct tcaagccgat actcccaaaa gttcccaccg acgcgacgct taatagtaat
     1741 accacccagc cgcggtgctc gagttcggcg gcatgaatga ctagagactt actgacgaac
     1801 ccgctgagca gtggcaaacc ggaaatcgac agcgcgccaa acatatagaa aaccaacacc
     1861 caccgcagcg gaccgttgag accgcccaac tcgcttagcc ggcgccgccc ggtggcctgg
     1921 atcaccgcgc cggtggccat gaaaagcaag cccttgtaga gaatatgcgc aaacgcatga
     1981 gcggtggcgc cattgagcgc cgtttcggtg cccaagccga tgccggcaat catgtaaccg
     2041 acttggctga cgatatgata ggagaggatg cgccggatgt cgttctcgat caccgcaaag
     2101 atcacgccgt agagcgccat ggcggtgccg gcgatgagca aaagttcagc gccgggaaac
     2161 gcgcgcgcca agacataaac cgctgctttg gtggtaaagg cactgagaaa aacactcccg
     2221 gtaggcgtcg cttcgggata ggaatcggcg atccaggcgt gcagcggcgg gattgcggcg
     2281 ttgacggcaa agcccagaag aatcagccaa ccggcgccgc ttaccggcag gggttcgaag
     2341 gaaagcgacg cggtgtcctg gatgtgccaa agtatccccg ccaagagcac tgcgccgccg
     2401 aacagatgca tcagcagata gcgcagcgca gcgcgcgtcg acagcccggt acgggccgat
     2461 agaatcagcc agactgaggc catcgccatg atttcccaaa agacatagag cgtcagccag
     2521 tcgccggcaa aaactactcc taggcccgcg ccggcgtaga gcaacgcggc aacctgttgg
     2581 cccaaatcgc gcaaatgaaa accgtagatc gcgccgagaa aagccgccag cgtaaaaacg
     2641 taaccaaaag caagactcaa gcggtcgacg cggctgatca tgagttcata atttagcaac
     2701 ggccatgtca gcaccgcgct agccgagagg tgagtgagta gcccgaagcc gagcgccgac
     2761 gccaggacga agagcactgg tcgcaatcgg cgcggcacaa ttggcagcag tagagcgccg
     2821 atcaagagcg gcgcggcagg catgagctca
//
LOCUS       DATIRS010000348         2618 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_322709, whole genome shotgun sequence.
ACCESSION   DATIRS010000348 DATIRS010000000
VERSION     DATIRS010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2618
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_322709"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            86..1324
                     /locus_tag="VLM90_04335"
     CDS             86..1324
                     /locus_tag="VLM90_04335"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12217.1"
                     /translation="MVGVGFLSHVVCAFHMSSTLSVFLKPLTEDLGVSRGLFSLLRSG
                     EILIGAAMAPLVGPMVDRFGGRWLMAGGALSAGLGFVLMSQVGAFWQFLLLRWIFVAI
                     GGVFMCHMIVSVTVSRWFVRKRGRAIAIASMGQGFAKVCSPVVTATLFAWVGWRLTWS
                     IFGLITLALVVVPALIFMRRSPEELGLQPDGMDAPPVSADAKQSNDAKKATLSADEAV
                     WTWRDVIRSRAFWLICIIYGMANVGIAGLNLHVFAYVTDIGFSPLVAATVLSIIASTQ
                     LGSTMVWGVISERMDIRHSSLIMFLVQSAGLALVLATDQVVPVYLGFFLYGIGLGGGW
                     VLQELIWATNFGRVSLGMVRGLGILVTHAFGAVGAPFFGFVHDVTGSYQSSFLAFVVA
                     LMIAAFLSLAVHAPQKTLRR"
     gene            1381..2520
                     /locus_tag="VLM90_04340"
     CDS             1381..2520
                     /locus_tag="VLM90_04340"
                     /inference="COORDINATES: protein motif:HMM:TIGR00056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaE family lipid ABC transporter permease
                     subunit"
                     /protein_id="HSQ12218.1"
                     /translation="MDSLISNGAKLRSDGPRNGLLKLSIDGRLDADSTGRVWRESTRL
                     VSAARAATVDLDASAMDYCDGSGIALLIQLRRLQQKAGGKLEIHGLRPEFQELLDDWS
                     HGSSGTTQSKAKVRVQLAEEIGQSAVQLWDDMREVISFIGQLGHAMVKAALHPSTVRW
                     RDTLLVAEELGVNALPIVALLSFLVGVIMAFQAAVALRQFGAEIFVANMIGLSVLREM
                     GPLMTAIILAGRSGSAFAAEIGTMKVREEIDALKTMGLEPVRFLVVPRVLAGVAMTPV
                     LTVFADLFGVMGGSVVMMSLGFPLITFFNQLQSAVSYGSLVGGLVKAFAFGILIAAIG
                     CLRGLQTETGASAVGLSTTHAVVSDIILIVITDGIFSVIYYYLWV"
BASE COUNT          415 a          743 c          823 g          637 t
ORIGIN      
        1 tcttcccggc aacggcggtg cctagaattc tcccacaaca ttttcatctt cccggtccga
       61 cggtaagttc ttctacggct ggtatattgt cggcgtaggt tttctttctc acgtcgtttg
      121 cgcatttcac atgtcgagca cgctgagcgt gttcttgaaa ccgttgaccg aggacttagg
      181 cgtgtcgcgc ggcttgttct cgcttttgcg ctccggggaa atcctcatcg gcgcggcgat
      241 ggcgccgctg gtgggaccga tggtcgatcg tttcggcggc cgctggttga tggccggcgg
      301 cgcgctttcg gcggggttgg gtttcgtgct gatgagccag gtcggcgcgt tctggcagtt
      361 tcttttgctg cgttggattt tcgtcgccat cggcggcgtg ttcatgtgtc acatgatcgt
      421 cagcgtgacg gtgtcgcgct ggttcgtgcg caaacgcggc cgggccatcg ctatcgccag
      481 catgggtcag ggatttgcta aagtttgtag tccggtagtg accgcgacgc tgttcgcctg
      541 ggtcggctgg cggctgacct ggtcgatctt tggtctgatc accttggccc tggtagtggt
      601 tcccgctttg atcttcatgc ggcgcagccc ggaagaactg ggcttgcagc cggatggcat
      661 ggacgcgccg ccagtcagtg ccgacgccaa gcaatcgaat gacgccaaaa aagcaacttt
      721 gtcggcggac gaagcggtgt ggacctggcg cgacgtgatc cgcagcagag cattttggct
      781 tatctgtatc atctacggca tggccaacgt cggcatcgcc ggattgaatc tgcatgtgtt
      841 cgcttacgtt accgacatcg gtttctcgcc gctggtagcg gcgacggtgc tgagcattat
      901 cgcgtcgacg cagcttggct cgaccatggt gtggggcgtg atcagcgagc gcatggacat
      961 ccgccattcc agcttaatca tgtttttggt tcagtcggcg ggattggcgc tggtgctcgc
     1021 caccgaccag gtagtgccgg tctacttggg cttttttctt tacggcatcg gtttgggtgg
     1081 tggctgggtg ctgcaagaat tgatttgggc gaccaatttc ggtcgcgtct ccctcggcat
     1141 ggtgcgcggt ctgggtattc tcgtgacgca cgcgttcggc gccgtgggag cgccgttctt
     1201 cggttttgtc cacgatgtta ccggcagcta ccagtcgtct ttcttggcct tcgtcgtcgc
     1261 tttgatgatc gcggcgttct tgagtcttgc agtacacgca ccgcaaaaaa ctctgcgccg
     1321 gtgagttgac cgcgccgatg gaccgcgcat aataaagaca ccaaccgcga atagctgcaa
     1381 atggattcac tcatttccaa tggcgccaaa ctgcgcagcg acggcccgcg caacggcctg
     1441 ctcaagctct ccatcgacgg ccggctcgac gccgacagca ccgggcgcgt gtggcgcgag
     1501 tcgacccggc tcgtgtcggc ggcgcgggcg gcgacggtgg atctcgacgc ttcagcgatg
     1561 gactactgtg acggttccgg catcgccttg ctgattcaat tgcgccggtt gcaacaaaag
     1621 gccggcggca agctggagat ccacggcctg cggccggagt tccaagagct gctcgacgac
     1681 tggtcgcacg gcagcagcgg cactacccag agcaaagcca aagttcgcgt gcagctggcc
     1741 gaagagattg gccagtcggc ggtgcaactc tgggacgata tgcgcgaggt gattagtttt
     1801 attggccaac ttggtcatgc catggtcaag gcagcgcttc atcccagcac ggttcgttgg
     1861 cgcgatactc tactggtcgc tgaagagctc ggtgtcaatg cgctgccgat cgtcgccttg
     1921 ttgagttttc tcgttggcgt catcatggcc tttcaggcgg cggtcgcctt gcgccaattc
     1981 ggcgccgaga tcttcgttgc caacatgatc ggcttgtcgg tgctgcgcga gatgggaccc
     2041 ctgatgaccg cgatcatcct cgccggccgc tcgggctcgg ccttcgccgc cgagattggc
     2101 accatgaagg tgcgcgagga aatcgacgcg ctcaaaacca tggggctgga gccggtgcgg
     2161 tttctggtcg tgccgcgggt gctcgccggc gtagccatga ccccggtgct cacggtgttc
     2221 gccgatctgt tcggcgtgat gggcggctcc gtggtcatga tgtctcttgg gtttccgttg
     2281 atcacttttt ttaatcaact tcagtctgcg gtgagttacg gttctttggt cggcgggctg
     2341 gtcaaggcct ttgccttcgg catcctgatc gccgccatcg gctgcttgcg cggcctacaa
     2401 accgagaccg gcgccagcgc cgtaggctta tccaccactc atgcagtggt cagcgacatc
     2461 attctcatcg tcatcaccga cgggattttt tcggtgatct attattacct ctgggtctga
     2521 caagcgctca tggcaaccag cgagacgctt attcgagtgg acggttttac tgcggcctac
     2581 gacggccgag tgattctcaa tcagctaagc ttccaagt
//
LOCUS       DATIRS010000349         4472 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_912552, whole genome shotgun sequence.
ACCESSION   DATIRS010000349 DATIRS010000000
VERSION     DATIRS010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4472
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_912552"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..793)
                     /locus_tag="VLM90_04345"
     CDS             complement(<1..793)
                     /locus_tag="VLM90_04345"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSQ12219.1"
                     /translation="MAGKILIVDDEPFNLALLEQELAELGYATERASNGAQALQKIAR
                     ANPALVLLDYQMPDMNGIEVLRNVRQTDLDLPIVLITAHGSIERAVEAVKAGADDFIT
                     KPFDPEHLAVVVKKALDRAQLKQDVEFFAQELGGRNHLVAGNSEAMRGIIDEAKKAAA
                     SKSTILLLGESGTGKELFARSMHDWSERRLKPFVAINCAGLAKELLESELFGHEKGAV
                     TGAHQLKKGKLELAHGGTVFLDEIGDLALELQTKLLRVLQEREFER"
     gene            complement(803..3436)
                     /locus_tag="VLM90_04350"
     CDS             complement(803..3436)
                     /locus_tag="VLM90_04350"
                     /inference="COORDINATES: protein motif:HMM:NF013132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HSQ12220.1"
                     /translation="MEPLADTILGVTIFSGLSREDVAKILGKLEECSFTAGETIIRQG
                     DQGDAFYLIQTGAVQVVVDSGAGNSEIIAILGPRDWVGEMALFSGEPRSATIVAVKDS
                     TLWRLSRQEWDDLIEKHPTLLLQCCATLSKRLSFADRQYSSGREAFNSLAEEFYAGRS
                     PRQQQFLRHAALLSAIEAATIEQLFQSKAASRVHADLSKSQSPLVRHHGDDRVTFHSF
                     FKDFLHDKLLAIDGSEIKQQLHGNFAKRYAAIGDWQQAIHHAIEVPDWPEVIKLVKAQ
                     SKETLTAAAQFVKNTFERLPREYFIADTALVNLKSDILVQLGDLPGALRAYQEVLAQR
                     AAAGEAVASYRRMAETLARRNEYGQAIGQLRSALSLIERDMTLPEHYSDMAPELVTFN
                     GERSGEDTPRRWRLSAAALKSAPLSKWFGALLGLAVGGYLWFATPNIGLEPSGTKLLG
                     LISLTLIFWVFRTLPDYGVALVFAMTVILTKLESAPTVMGGFASTTWFMTLGVLGLGA
                     AITGCGLFYRLSLHLVRLFPLSFHWQIIATGIMGVVVMALIPQQTARTVITSQMLINL
                     SESLGYKTPSKASTGLFVASFLGLGQLGFLFLTGSTTSLIAWGLLPPDVREQFTWGYW
                     FLAALPPTLVVIVIILAVAVFLYRPETHSNISYKMVQTQLDILGRMSHKEWISLVVLL
                     LTVVGWLTAPYHGIDGAWIAIIAFSVLVNTAILDWGMMRKGIDWELLIHMGVTLSLPT
                     LMKQAKIDVWLVDVISPLILPFMDSPVWFFVIIALLTYVLKLVFTSFLAVVTLCVALL
                     PLAIDVGMNPWIIAMMILIASEVWFFPYQVDWHMLAHSTTDGKGFSYPLMCRINPVYA
                     IAYIIALLVAIPYWRFLGLMN"
     gene            complement(3445..>4472)
                     /locus_tag="VLM90_04355"
     CDS             complement(3445..>4472)
                     /locus_tag="VLM90_04355"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12221.1"
                     /translation="GIPRVGVDAAVKRPSKSLWPAAGQLFALVLLLSAVAEAQSQIKT
                     RIGVLLPELGRAQSQSVKGLHEEITRLGYIEHKNLTVETRNAKGDRGALRPAADDLVA
                     RKVEVIFTTGTRATLAAAGASAEIPVVFVHPGDPVAAAMVQNLNAPAQNLTGIAGFAV
                     EKTEKRLELLKELIPELREVHIFFDSNNNFSRDNFALAQAAAKKLGLPVVAHGVKAAD
                     ELKTTLSGMRIAPGVALFHVPDDLVEGEAEFIFTTARQKKLPSMFNEESWAIQGATAA
                     YGPSYLDMGRRAGAMIGRILKNPKTALPAVQRADKFDFIVNYRTANFMGMKIAPSVLK
                     KADKIIR"
BASE COUNT          919 a         1292 c         1365 g          896 t
ORIGIN      
        1 cgcgctcgaa ctcgcgttcc tgcaagacgc gcagcagttt ggtttgcagt tccaacgcca
       61 gatcgccgat ctcgtcgaga aacaccgtgc cgccatgggc gagctccagt ttgcctttct
      121 tcaactgatg ggcgccggtg acggcgcctt tttcatggcc gaacagttcg ctttcgagga
      181 gttctttagc cagcccggcg cagttgatgg cgacaaatgg tttcaaccgg cgctcgctcc
      241 agtcgtgcat cgagcgggcg aacagttcct tgcccgtgcc gctctcgccg agcagcagta
      301 tcgtcgattt actcgccgcg gcttttttag cctcgtcgat gatgccgcgc atggcctcgc
      361 tgttgcccgc caccagatga ttgcggccgc cgagctcctg ggcgaagaac tcaacatctt
      421 gtttgagctg ggcgcgatcg agggctttct tgacgaccac ggcgagatgc tccgggtcaa
      481 acggcttggt gatgaaatcg tcggcgccgg ctttgaccgc ttcgacggcg cgctcgatgc
      541 tgccatgggc ggtgatcaaa acgatcggca gatcgaggtc ggtctgacgc acgttgcgca
      601 gcacttcgat gccgttcatg tcgggcatct gataatcgag cagtactaga gcgggattgg
      661 cccgagcgat tttttgcaac gcttgggcgc cgttgctcgc ccgttccgtc gcatagccca
      721 actcggccaa ttcctgttcg agcagggcga gattgaacgg ttcgtcgtcg acgatgagaa
      781 ttttaccagc cacggcttct tgttagttca tcaagcccaa gaaacgccag taggggatcg
      841 ccaccagcag cgcgatgatg taggcgatag cgtaaaccgg attgatccgg cacatgagcg
      901 gataggaaaa acctttgccg tcggtggtgg aatgggcgag catatgccag tcgacttgat
      961 aggggaaaaa ccatacttcc gaagcgatca gaatcatcat ggcgatgatc cacgggttca
     1021 tgccgacatc gatggccagc ggcaggagcg cgacacagag cgtgaccacg gccaagaagc
     1081 tggtaaagac cagtttcaag acataggtca gcagcgcgat gatgacgaaa aaccataccg
     1141 gactatccat gaacggcaga attaacggcg agatcacgtc gaccagccag acgtcgatct
     1201 tggcctgttt catcaacgtc ggcagactta gggttacgcc catgtggatt agcaattccc
     1261 agtcgatgcc tttgcgcatc atgccccaat cgaggatcgc ggtgttgacc agcaccgaga
     1321 aggcgatgat ggcgatccaa gcgccgtcga tgccatggta gggcgcggtc aaccagccga
     1381 cgacggtgag cagcagcacg acgagactga tccattcctt gtgcgacatg cggcccaaga
     1441 tatcgagctg ggtctgcacc atcttataag aaatattcga atgggtttcc gggcgataaa
     1501 gaaaaaccgc caccgccaag atgatgacga ttacgaccaa ggttggcggc agcgcggcca
     1561 aaaaccaata gccccaagtg aattgctcgc gcacatccgg cggcaacaag ccccaggcaa
     1621 tcaagctggt ggtggagccg gtcaaaaata aaaatcccag ttggcccagg ccgagaaagc
     1681 tcgcgacgaa aagtccggtg gatgccttcg acggcgtttt gtagccgaga ctttcggaca
     1741 gattgatgag catttgactg gtgatcacgg tgcgcgcggt ctgctgcggg atcagcgcca
     1801 tgaccaccac ccccatgatg ccggtggcga tgatctgcca gtgaaaactc agcgggaaga
     1861 gccggaccag atggagcgat agccggtaga atagaccgca gccggtgatc gccgcgccca
     1921 gtcccaagac gccgagagtc atgaaccaag tcgtgctggc gaagccgccc atcaccgtcg
     1981 gtgccgactc aagtttggtc aggatgacgg tcatggcgaa gaccagcgcg acgccgtagt
     2041 ccggcaaggt gcgaaagacc caaaagatca gggtcagcga gatgagtccc aacagcttcg
     2101 tgccggaggg ctccaagccg atgttcggtg tggcaaacca gagatagccg ccgacagcga
     2161 ggcccaacaa ggcgccgaac catttgctca agggcgccga ctttaatgcc gcggccgata
     2221 agcgccagcg gcgcggcgtg tcctcgccgc tgcgctcgcc gttaaacgtc accagctcgg
     2281 gcgccatgtc gctgtagtgc tctggtagcg tcatgtcgcg ctcgatcaag ctcagagcgc
     2341 tgcgcagttg gccgatcgcc tggccatact cgttgcgccg cgccaaggtt tcggccatgc
     2401 ggcggtagct ggcgaccgcc tcgccggcgg cggcgcgttg cgccaagact tcctgatagg
     2461 cgcgcaatgc gccgggcaaa tcgcccagct ggaccaagat atcgctcttc aaattgacca
     2521 gggcggtatc ggcgatgaaa tactcgcgcg gcaggcgctc aaaagtgttt ttaacgaatt
     2581 gcgctgccgc ggtgagggtt tctttactct gggctttgac gagcttgatc acctcgggcc
     2641 agtccggcac ctcgatagca tgatgaatcg cctgttgcca gtcgccgatg gcggcgtagc
     2701 gtttggcgaa gttgccgtgc agttgctgct taatttcact gccgtcgatg gcgagcagct
     2761 tgtcgtgcaa gaagtctttg aagaaactgt gaaatgtgac ccggtcgtcg ccgtgatggc
     2821 gcaccagcgg cgactggctc ttgctcaagt cggcatgcac gcggcttgcc gctttcgatt
     2881 gaaagagctg ctcgatggtg gcagcctcta tggcgctcaa cagcgcagcg tgacggagga
     2941 actgttgctg gcgcggcgat ctgccggcgt agaactcttc ggctagggaa ttaaacgctt
     3001 cgcgcccgct ggagtactgc cggtcggcaa aggacaagcg cttgctcagg gtggcgcagc
     3061 attgcaacag caaggtcgga tgtttctcaa tcaagtcatc ccactcttgc cggctcaggc
     3121 gccatagggt ggagtctttg accgcgacaa tggtcgccga acgcggctcg cccgagaaca
     3181 aggccatctc gccgacccag tcccggggcc ctaaaatcgc gatgatctcg gaattgccgg
     3241 cgccgctgtc gaccaccacc tgcaccgcgc cggtctgaat caaataaaac gcatcgcctt
     3301 gatcgccctg gcgaattatc gtctcgcccg cggtaaaact gcactcctcc agtttgccga
     3361 ggatcttggc gacatcctcg cgcgagaggc cggagaagat cgttacgcca agtatggtat
     3421 cggcgagtgg ttccatagtc tgggttagcg gatgatcttg tcggctttct tcagtaccga
     3481 cggcgctatc ttcatgccca taaagtttgc ggtccggtag ttgacgatga aatcgaattt
     3541 gtcggcgcgt tggacagccg gcagcgcggt tttcgggttc ttcaagatgc gcccgatcat
     3601 agcgcctgcg cgccgcccca tgtcaaggta actcgggcca taggccgcgg tggcgccctg
     3661 gatcgcccag gattcttcgt tgaacatgct cggcaacttt ttctgccgcg cggtggtgaa
     3721 gatgaactcc gcctcgccct cgaccaaatc gtcgggcacg tgaaacagcg cgactcccgg
     3781 cgcgatgcgc atgccgctca gagtggtctt caactcgtcg gcggctttga cgccatgtgc
     3841 gaccaccggc agaccgagtt ttttcgccgc ggcctgggcc aaagcgaagt tgtcgcggga
     3901 aaaattattg ttgctgtcga aaaaaatatg cacttcgcgg agctcgggga tcagttcttt
     3961 caataactcc aagcgtttct cggtcttttc cacggcgaag ccggcgatgc cggtgagatt
     4021 ctgcgccggc gcgttcaggt tttgtaccat tgccgcggcc accggatcgc cgggatggac
     4081 gaagacgacg ggaatttcgg cgctggcgcc agccgccgcc aaggtcgcgc gggtgccggt
     4141 ggtgaaaatc acctcgactt tgcgcgccac caagtcgtcg gcggcgggac gcagtgcgcc
     4201 gcggtcgcct ttggcattgc gggtttcgac ggtgaggttc ttgtgttcga tataccctaa
     4261 gcgtgtgatc tcctcgtgca agcctttgac ggactgggac tgagcccggc cgagctccgg
     4321 cagcaagaca ccgatgcggg ttttgatctg ggattgggcc tcggcgacag cgctcagaag
     4381 caaaaccagc gcaaagagtt gcccggctgc cggccaaagt gatttcgacg ggcgtttcac
     4441 ggcagcgtca actccaaccc ttggtatgcc ac
//
LOCUS       DATIRS010000350         2002 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_27567, whole genome shotgun sequence.
ACCESSION   DATIRS010000350 DATIRS010000000
VERSION     DATIRS010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2002
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27567"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(105..1580)
                     /locus_tag="VLM90_04360"
     CDS             complement(105..1580)
                     /locus_tag="VLM90_04360"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12222.1"
                     /translation="MKHAIDPEGKRLPIKIDTTSNGEFEPVPLSPANRAGNRLAHEAA
                     SASAKRLGVSRRDFLVSACGAASALLAFNTTNAAVGGLGGFFELEPEAAFEPQLAQAR
                     IGGKGEFIFDVQGHFVDPTGAWVKAAPADAFKWSPKTGCALAAKPDARSYLNCLGPEE
                     FVKDVFLDSDTDMMVLSFVPSRRDSEPLTIQAADAVRRIVDRMEGSHRLLVHGRVNPN
                     QPGDLETMDELKERWKVSAWKTYTQWGVDGKGFFLSDAIGTRFIEKARALGVKVICVH
                     KGLPFGKQSYEHSQCSDIGVVAKRFPDVSFLVYHSGFVSGVPERAYTGRGASDGIDTL
                     IRSLVENDVKPNSNVYAELGSTWRFLMRDPDGAAHALGKLLKHCGEDNLLWGTDSIWY
                     GSPQDQIQAFRSFQIAAELRAKHGYPEITPALRAKIFGLNATRPYGISADDVKKRASS
                     DHVARERLAYRERPEPHYLPYGPKSRREFLNLLRWNGGSRA"
BASE COUNT          412 a          577 c          591 g          422 t
ORIGIN      
        1 cgagttggcc gagcgcttgg aaaaaatgga tgaaatcccc gtgatggaag aaatctgagc
       61 gcaaatcaac gtgaagcggc ggttatattt tccggcaaaa gctgctaggc gcgcgagccg
      121 ccattccagc gcagcaaatt caaaaattcc ctccggcttt tcggtccgta gggaagatag
      181 tgcggttcgg ggcgctcgcg gtaggcgaga cgctcccgcg cgacatgatc gctagaggcg
      241 cgctttttta catcgtcggc gctgattcca tagggccgtg ttgcgttcag cccgaagatc
      301 ttcgcgcgca gcgccggggt aatctcggga tagccgtgct tggcgcgcaa ttcggccgcg
      361 atctgaaaac tgcgaaacgc ctggatctga tcctgcggcg agccgtacca tatggagtcg
      421 gtgccccaga gcaggttgtc ctcgccgcaa tgtttaagga gtttgccaag cgcatgcgct
      481 gcgccatcgg ggtcgcgcat caggaagcgc caggtgctgc cgagctccgc gtaaacgttg
      541 ctgttgggtt tgacgtcgtt ctcgaccagc gatcggatca gggtatcgat gccgtcgctg
      601 gcaccgcgcc cggtgtacgc gcgctccggg acgccgctca cgaaacccga atgatagacg
      661 aggaaactca cgtcggggaa gcgcttggca accactccaa tgtcgctgca ctggctatgc
      721 tcgtaggatt gtttgccgaa aggcagtccc ttgtgcacgc agatcacttt gacgccgagc
      781 gcgcgcgcct tctcgatgaa gcgcgtgccg atggcgtcag atagaaagaa acccttgccg
      841 tcgacgcccc actgggtata ggtcttccac gcgctcacct tccagcgctc tttcagctcg
      901 tccattgttt cgagatcgcc aggctgattg ggatttaccc ggccgtgcac cagcaggcga
      961 tgcgagcctt ccatgcggtc gacaatgcgg cgcaccgcgt ccgcggcctg gatcgtgagc
     1021 ggttcggaat cgcggcgcga cggcacgaac gagagcacca tcatgtcggt atcgctgtcg
     1081 agaaacacgt ccttgacgaa ttcctcgggg ccgaggcagt tgagataact gcgtgcatcg
     1141 ggtttggcgg cgagagcgca gccagttttg ggcgaccatt tgaaagcatc ggcaggcgct
     1201 gctttgaccc aagccccggt tggatcgacg aagtgcccct gcacgtcgaa gataaactcg
     1261 cccttgccgc cgatccgtgc ctgggcgagt tgcggctcga acgccgcttc aggttcgagt
     1321 tcgaaaaacc cgccgagccc tccgactgcc gcgttggtcg tattgaacgc gagcaacgcg
     1381 ctcgccgcgc cgcatgcgga aaccagaaag tcgcgccggc taacgcccag ccgtttcgcg
     1441 ctagcgctcg ccgcctcgtg cgccaggcgg ttgcctgcgc gattcgccgg cgaaagcggc
     1501 acaggttcga actcaccatt cgaagtcgta tcgatcttga tcggcagcct tttgccttcg
     1561 ggatcaatcg cgtgtttcat gggcggcagt ataaacgaag cggtcacgag aggccacgag
     1621 ccccctcttt tttatatgct gctaatggtt tgcgctgctc accctctgaa ttcatttcgc
     1681 cgtttcgata attctcgaaa cttgtgagtt tccccaagtt cgtaaatctg ttaaacaact
     1741 tgaacggagc gaagcggtta aacggctggg actgtttgaa cttcacgtgc cccaagcatc
     1801 gaaaaaaggt tttgcgcgag cggactattt tcagtcattc tccagatggt gatatcgtta
     1861 acgccggcac cgaagcaaac atgaatgagt ctagatatgg cacatgaatc catcttggtg
     1921 gtggacgacc aacccacaag tataaaactc atccagtcca tactcgccgg cgaagggtat
     1981 caaatgctgg ttgcggtaaa tg
//
LOCUS       DATIRS010000351         2092 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1502787, whole genome shotgun sequence.
ACCESSION   DATIRS010000351 DATIRS010000000
VERSION     DATIRS010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2092
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1502787"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1084
                     /locus_tag="VLM90_04365"
     CDS             <1..1084
                     /locus_tag="VLM90_04365"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12223.1"
                     /translation="SVFEFRHCFGHFTRVEGAIEWEGSSMATQRIVRSFLGVLLFIVG
                     GFAGESRGQSQTLTAFYTAPVVSMAPMWIAKEAGFFKKQGLDVRLVFIASGPLGTTAI
                     LSGDVDVGVIGGFAPIRAIAGGNKNLAMIGQTKNRMTGAIVGKKEIASVQDLKGKRLG
                     IDRIGSNPDMFTQASLARYNIDPLRDLQYIQLGSIGQGIPALKAGTIDAVSTSTPHDL
                     FAQRLGFKVILDITAMKIPLASTVLLSARNTVERKQADLAKFMRAYAEAIHYFLTNKK
                     GTIQIVAKYTKVEDREVNGHAIESESAAVERTLQVDPKGIELILTLMSKSMPQGPAVK
                     TEEFYDSRFTNELRDSGFLKRLWGEK"
     gene            1330..>2092
                     /locus_tag="VLM90_04370"
     CDS             1330..>2092
                     /locus_tag="VLM90_04370"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSQ12224.1"
                     /translation="MIETEGLTGADTLLRVLSHMGVDRIFSSPGSEWAPVWEAFAKAK
                     AQSEGVPQYISSRHEEVAVGMASGYAKATGKLAAVMIHTTVGALHATMALRGALHEQI
                     PMVVFTGESLGFGEEAGPDVGAQWLGALADIGGPARLVERCVKWSYGVNAKSLLPSTI
                     QRACQLAMGTPKGPVFVSLPMEYLFDTMTKNAAAENVAIPAPMADPAALDELAASLAG
                     AKNPLIVTEEAGRDPRVVEQLVELAELLGAGVVESR"
BASE COUNT          460 a          569 c          653 g          410 t
ORIGIN      
        1 ttcggtattt gagtttcgtc actgctttgg gcatttcacg cgcgtcgagg gcgcgatcga
       61 gtgggagggt tcgagcatgg caactcagcg catcgtgcgt tcatttctcg gagtcttact
      121 tttcatagtt ggcgggttcg ccggagaaag caggggccaa tcgcaaacgc tcacggcgtt
      181 ctacaccgcg ccggtggttt cgatggcgcc catgtggatc gccaaagaag ccggattttt
      241 caagaagcag ggcttagacg ttcgcttggt gttcattgct tccggtccgc tcggtaccac
      301 ggcgattctg tcgggcgacg tcgatgtcgg agtgatcggc ggcttcgccc cgataagggc
      361 gattgccggc gggaataaga atttggcgat gatcggccag accaaaaacc gcatgaccgg
      421 cgccatcgtc ggcaaaaaag aaatcgccag cgtccaggat ctgaaaggca agcggctcgg
      481 tatcgaccgg atcggttcga atccggacat gttcactcaa gcatcactgg cgcgttacaa
      541 catagatccg ctgagagacc tccaatatat ccagctcggc agcatcggcc agggaatccc
      601 ggcgctcaag gcgggaacca tcgacgccgt tagcacgagc acgccgcacg atctgtttgc
      661 ccagcggctg ggcttcaagg tgatcctgga tatcacggcc atgaagattc ccctggcatc
      721 gacagttctc ctctcggcgc gcaacaccgt cgagcgcaag caagctgacc tggcgaaatt
      781 tatgcgcgct tacgcggaag cgattcacta ttttctgacg aacaaaaaag ggaccatcca
      841 gatcgtcgcc aaatatacca aagtcgagga ccgcgaagtg aatggccacg cgatcgagtc
      901 tgagtcggcg gccgtggaac gaaccctcca agtcgatccc aaaggcatcg aactgatcct
      961 cacgctcatg agtaaatcga tgccccaggg tccggcggtg aaaaccgagg agttttacga
     1021 ttcgcgtttc accaacgagc tgagagacag cggctttctc aagcggttgt ggggggagaa
     1081 gtgacgctaa gaggtaaggg gtaaggagtg aggggttcgg agtaagaaaa gattctgctg
     1141 aaaaacccct aggaatgctt cgacgggctc agcatgaacg aaaaacctcc agtgatttta
     1201 accgatcttc cgttcctcct gaggctctcg aaggatgaac ggaaggtctt tcagcagaat
     1261 cagaaaaaat gaccgatacg atttggacgg ctggaacgac ttgaacgttt tgaacgcgag
     1321 gagattttta tgatcgagac cgaaggcttg accggggccg atactttgtt gcgcgtgctc
     1381 tcccatatgg gagtggatcg aatcttttct tcccccggct cggagtgggc gccggtgtgg
     1441 gaagcgtttg ccaaagccaa ggcgcagagc gagggtgtgc cgcagtatat cagctcgcgc
     1501 cacgaagagg tcgccgtcgg catggccagc ggctacgcca aggcaacggg aaaacttgcc
     1561 gcggtgatga tccacaccac ggttggcgcg ctgcatgcga cgatggcgct gcgcggcgcg
     1621 ttgcatgaac agattcccat ggtggtgttc accggcgagt cattaggttt cggcgaagag
     1681 gcgggtccgg acgtgggcgc gcaatggctc ggcgccttgg ccgatattgg cggaccggcg
     1741 cgcctcgtgg aacgctgcgt taaatggagc tacggcgtca acgcgaaatc gctgttgccg
     1801 tcgaccatcc agcgcgcctg ccaattggcg atgggcactc ccaagggacc ggtcttcgtt
     1861 tcgctgccga tggaatatct gttcgataca atgaccaaga acgcggcggc ggaaaatgtc
     1921 gcgattccgg cgcccatggc cgatccggcg gcgctcgacg aactcgcggc gtccctcgcc
     1981 ggcgcgaaaa atcccctgat tgtcaccgag gaggcaggac gcgacccacg ggtggtcgaa
     2041 caactcgtcg agctggccga gttgctcggc gccggcgtcg tcgaaagccg gg
//
LOCUS       DATIRS010000352         4269 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1699904, whole genome shotgun sequence.
ACCESSION   DATIRS010000352 DATIRS010000000
VERSION     DATIRS010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4269
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1699904"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..739)
                     /locus_tag="VLM90_04375"
     CDS             complement(<1..739)
                     /locus_tag="VLM90_04375"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSQ12225.1"
                     /translation="MKIVVTGGAGFIASNITDAYIERGHEVHILDDFSTGQRSNVNAK
                     ATLHQIDIADRQSSKLIEQIKPDILSHHAAQMDVRHSVADPTFDARVNILGFINLLEG
                     CKNAGVKKVIFASSGGAVYGEQESFPAVESHATQPASPYGVSKRTGELYLSYYRQAFG
                     LPYIALRYANVYGPRQSTQGEAGVVAIFLSLLLTGKTPVINGDGKQSRDYVYVGDVVA
                     ANVAALDSDFVGPVNIGTGIETDVVAIY"
     gene            complement(750..1682)
                     /locus_tag="VLM90_04380"
     CDS             complement(750..1682)
                     /locus_tag="VLM90_04380"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucuronic acid decarboxylase family
                     protein"
                     /protein_id="HSQ12226.1"
                     /translation="MARYLITGGAGFIGSHLCEYFLNQGHQVLCMDNYSTGANENISA
                     FLKNPRFRFIDHNVSRYIEVPEPLDFVLHFASPASPVDYLELPIPTLKVGALGTHNSL
                     GLAKEKGATYLLASTSEVYGDPLVRPQSEEYWGNVNPIGPRGVYDEAKRFAEAITMAY
                     HRFHHLDTRIVRIFNTYGPRMRIRDGRVVPNFIMQALKGEPLTVYGQGQQTRSFQYVD
                     DLVAGLDKLLQSDHHLPVNLGNPYEMTVLEFAKKIIEMTQSKSEIVYKPLPEDDPQVR
                     QPDITKARNILGWEPKVRLEEGLVKTIEYFRTKL"
     gene            complement(1675..2979)
                     /locus_tag="VLM90_04385"
     CDS             complement(1675..2979)
                     /locus_tag="VLM90_04385"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HSQ12227.1"
                     /translation="MKLAVVGTGYVGLVAGTCLAESGNDVICVDIDAKKIDMLKGGKV
                     PIYEPGLEEMVRRNAEDQRLSFTTDLPSAVQKSDVIFIAVGTPQGPTGHANLEFVKAT
                     AKGIAKALDSFKIIVTKSTVPVGTADQIKQWIGEETTQPFAVASNPEFMKEGAAVEDF
                     MKPDRVVLGGDHAQALATLRELYEPFVRTGNPILIMDSRSAEMSKYAANAMLATKISF
                     INEVARLCEAMNADIGEVRRAISLDRRIGPHFIFPGAGYGGSCFPKDTRAMIGMGGER
                     QEMVLLKAVEQVNERQKQLLFDKVRRHFGDKLAGLTFAVWGLAFKPRTDDMRDAPAIN
                     LIEALLGAGARVQAFDPEAMEEARKIFGDRIQYTHRNYDALHGAAALLIVTEWNEFRR
                     PDFTRVKNLLTHPVIFDGRNVYDPADLRKLGFTYYSIGRHDG"
     gene            complement(2976..3929)
                     /locus_tag="VLM90_04390"
     CDS             complement(2976..3929)
                     /locus_tag="VLM90_04390"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSQ12228.1"
                     /translation="MELSVVIPVYNEEENVEPLIGEIKTAMSALGKSYEVVVVDDGSR
                     DGTFLKLRQIHQRVPQLKVIGLKRNFGQTAALAAGLAHAQGDVVILMDGDAQNDPADI
                     PALLAKLDEGNDLVAGWRHNRQDPFFTRRLPSMIANRLISLTTHVKLHDYGCTMKALR
                     QDVAKSLRLYGEMHRFIPAIAYERGARIAELKVNHRPRLRGQSKYGITRTLRVVLDLM
                     TVKFLSSYSTRPSHVFGPIGIGSGLAGFAIGLHLTVQKVFYGQDIGARPLLLLAILLI
                     FIGFQFVTMGLLGEMLARTYHESQDRPVYVVGEILEGRTGA"
     gene            complement(3934..>4269)
                     /locus_tag="VLM90_04395"
     CDS             complement(3934..>4269)
                     /locus_tag="VLM90_04395"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HSQ12229.1"
                     /translation="LRMGPKMVLIKRGEYGVLQFSDSAIFATPAYPLEEVFDPTGAGD
                     SFAGGLMGQLARTGDLSQGGLRRAIVYGSVVASFTVEDFGVKRLIDVSLPAIEERYQR
                     FIELTDFHS"
BASE COUNT          906 a         1236 c         1206 g          921 t
ORIGIN      
        1 tgtagatcgc caccacgtcg gtttcgatgc cggtaccgat gttgaccggt ccgacaaagt
       61 cactatcgag ggccgcgaca ttggccgcga cgacatcgcc gacgtaaaca taatcgcggc
      121 tttgtttgcc gtcgccattg atgaccggcg ttttccccgt caatagcagg gacaggaaga
      181 tcgccaccac accagcctcg ccttgggtcg actggcgcgg gccgtaaaca ttggcataac
      241 gcagggcgat gtacggcaag ccgaacgcct ggcgatagta cgaaagatac aattcgccgg
      301 tgcgcttgct cacgccgtag ggactggccg gttgggttgc atggctttcc accgcgggga
      361 aactctcctg ctcgccatag accgcgccgc cggaagaggc gaagatcact ttcttgacgc
      421 cggcgttctt acaaccctcg agcaaattaa taaaacccaa aatattcacc cgcgcgtcga
      481 aggtcgggtc ggctaccgag tggcgcacgt ccatttgcgc ggcgtgatga ctcaaaatat
      541 cgggtttgat ttgctcgatg agcttgctgc tttgacggtc ggcgatatcg atctggtgca
      601 aggtcgcctt agcgttgacg ttgctgcgct gcccggtgga aaaatcatcg aggatatgga
      661 cctcatggcc gcgttcgata taggcatcgg taatgttcga ggcgataaag ccggcgccac
      721 cggtaacgac gattttcaca gtctcactcc tagagtttgg ttctgaaata ctcgatggtc
      781 ttgaccaagc cctcttcgag tctgaccttg ggctcccagc cgagaatatt tctcgccttg
      841 gtgatatccg gctggcgcac ctgcggatcg tcttccggca gcggtttgta aacgatctcg
      901 cttttggatt gggtcatttc gatgattttc ttggcgaatt ccaaaaccgt catctcgtaa
      961 gggttgccga gattgaccgg tagatggtga tcggactgga gcagcttgtc gagcccggcg
     1021 accaggtcgt cgacgtattg gaagctgcgc gtctgttgtc cttggccata gaccgtcagc
     1081 ggctcgcctt tgagcgcctg cataataaag ttgggcacca cccggccgtc gcggatgcgc
     1141 atgcgcggcc cgtaggtgtt aaaaatgcgc acgatccgcg tgtcgagatg atggaaccgg
     1201 tggtacgcca tggttatcgc ttcggcgaac cgtttggctt catcataaac gccgcgcggc
     1261 ccgatcggat tgacgttgcc ccagtactct tcgctctgcg gccgcaccag tgggtcgcca
     1321 taaacctccg acgtcgaagc gagcagatag gttgcgcctt tctctttcgc caggccgaga
     1381 gaattatggg tgcccaaggc gccaactttc aaagtcggaa tcggcaattc taaataatcc
     1441 accggactcg ccggcgaggc gaagtgcagg acaaagtcca agggctccgg cacttcgata
     1501 tagcggctca cattgtggtc gatgaagcga aagcggggat ttttcagaaa cgcgctgatg
     1561 ttttcattgg cgcctgtgga gtagttatcc atgcacaaga cttggtgccc ttgattgaga
     1621 aaatactcgc acaagtggga gccgatgaaa cccgcgccgc cggtgattaa atatctagcc
     1681 atcatgtctc ccgatggaat aataggtaaa tcccagtttg cgcaaatccg ccggatcgta
     1741 gacgttgcgg ccatcaaaaa tgaccggatg ggtgagcagg tttttgacgc gagtaaaatc
     1801 cggccggcga aactcattcc actcggtgac gatcagcaac gccgccgcgc catgcaacgc
     1861 atcgtagtta cgatgggtgt attgaatgcg gtcgccgaag attttacgcg cttcttccat
     1921 cgcttcggga tcgaaggcct gcacccgggc gccggcgccg agcagcgctt cgatgaggtt
     1981 gatcgccggc gcatcgcgca tgtcgtcggt gcgcggcttg aacgccaacc cccacactgc
     2041 gaaagtcagt ccagcgagtt tatcgccgaa gtggcgccga actttgtcga acagtaattg
     2101 cttttgccgc tcgttgacct gttccaccgc tttgagcagg accatttctt ggcgctcacc
     2161 gcccatgccg atcatggcgc gggtatcctt gggaaaacag gaaccgccat aaccggcgcc
     2221 ggggaaaata aaatgcggcc cgatgcgccg gtcgaggctg atcgcccggc gcacctcgcc
     2281 gatgtcggcg ttcatcgcct cgcacagccg ggcgacttca ttgataaacg agatcttggt
     2341 cgcgagcatg gcgttggcgg cgtacttact catctccgcg ctgcggctgt ccatgatcag
     2401 gatgggattg ccggtgcgga caaaaggctc gtagagttcg cgcagtgtcg ccagcgcctg
     2461 tgcatgatcg ccgcccaaaa ccacccggtc gggcttcatg aaatcttcca ccgctgcgcc
     2521 ctctttcatg aactcggggt tggacgcgac ggcaaacggt tgggtggttt cttcaccgat
     2581 ccactgtttg atctggtccg ccgtgcccac cgggacggtg ctcttggtga cgatgatctt
     2641 gaatgaatcg agcgctttag cgatgccctt ggcggtcgct ttgacgaatt ccagattggc
     2701 atgacccgtc gggccttggg gcgtgccgac ggcgatgaaa atgacatccg atttctgcac
     2761 cgcgctgggc agatccgtgg tgaagctcaa gcgctgatct tcggcattgc gccgcaccat
     2821 ctcttccaat cccggctcgt agatcggcac cttgccgcct ttcagcatgt cgattttttt
     2881 tgcgtcgata tcgacacaga tcacgtcatt gccgctctcg gccaggcaag ttcccgcgac
     2941 cagaccgaca taaccggttc ccacaactgc caatttcatg cgccagttct cccttcgaga
     3001 atttcgccga ccacatagac cgggcggtcc tgggattcat gataggtccg cgccaacatt
     3061 tcacccaata aacccatggt aacgaattga aagccaatga agattaacag tatggcgagc
     3121 aacagcaacg gacgggcgcc aatatcctgg ccgtagaaaa ccttctgcac cgtcagatgc
     3181 aggccgatgg caaagcccgc caagccgctg ccgatgccga tgggaccgaa tacatgggat
     3241 ggccgggtcg aataactgct taaaaacttt accgtcatta gatcgagcac cacgcgcaac
     3301 gttcgcgtga taccgtattt cgactgaccg cgcaggcgtg gccggtggtt aacctttaat
     3361 tcggcgatgc gcgcgccgcg ctcgtaagcg atggccggaa taaaccggtg catttcgccg
     3421 tacaggcgca aactcttcgc gacatcttgg cgcagcgctt tcatagtaca gccgtagtca
     3481 tggagcttca catgggtggt caacgaaatc agccggttgg cgatcatcga cggcaaccgc
     3541 cgggtgaaaa acgggtcttg acgattatgc cgccagcccg ccaccagatc gttgccttcg
     3601 tcgagcttgg ccagcaacgc gggaatatcg gcgggatcgt tctgcgcatc gccatccatg
     3661 aggatcacaa catcgccctg cgcgtgggcc aaaccggccg ccagcgccgc agtttggccg
     3721 aagttgcgct tgagaccaat gaccttgagc tgcggcaccc gttggtgaat ctgccttagc
     3781 ttgaggaatg ttccgtccct gctgccatcg tcgacaacca cgacttcata gctttttccc
     3841 aacgccgaca ttgcagtttt aatctcgcca atcagcggct cgacgttctc ttcctcgttg
     3901 tagaccggaa tgacgacaga aagctccatc ggctcaagaa tgaaaatcgg taagctcgat
     3961 aaaacgttgg tagcgttctt cgattgccgg cagtgagaca tcgatgagtc ttttgacgcc
     4021 aaagtcctcg acggtaaacg acgccaccac cgagccgtag acgatcgccc ggcgcaagcc
     4081 cccctggctc aaatcgccag tgcgggccag ttggcccatc aggccgccag caaaggaatc
     4141 gccggcgccg gtgggatcga agacttcttc caagggatag gctggcgtcg caaaaatcgc
     4201 ggaatcggag aattgcaaaa ccccatactc gccgcgcttg atcaaaacca tcttcgggcc
     4261 catgcgcag
//
LOCUS       DATIRS010000353         1823 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1895699, whole genome shotgun sequence.
ACCESSION   DATIRS010000353 DATIRS010000000
VERSION     DATIRS010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1823
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1895699"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1471
                     /locus_tag="VLM90_04400"
     CDS             <1..1471
                     /locus_tag="VLM90_04400"
                     /inference="COORDINATES: protein motif:HMM:NF015177.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12230.1"
                     /translation="VDPLDHRNRRVRNTEWFHMVNDDVISMPDKWEYPWYAAWDLAFH
                     CIPLALLDPEFAKQQLILLGREWYQHPNGQIPAYEWAFGDVNPPVHAWAAWRVYKVEM
                     KRRGEGDRKFLERIFQKLMLNFTWWVNRKDADGRNVFQGGFLGLDNIGVFDRSAPLPT
                     GGHIEQSDGTSWMGMYCLNMLAIALELARDNPAYEDVASKFFEHFVYICEAMNNLGGE
                     NIELWDRQDGFFYDVLTLPNGERKPLRVRSMVGLIPLFAVETLDPELIEKLPGFKRRM
                     QWFIENRPELSEHIEIEATDEGPRRFLSLVNRHRLRRVLHYMLDEKEFFSPYGIRALS
                     HFHAENPYKFGVNGSEYRVDYEPAESSTGLFGGNSNWRGPIWFPVNFLLIESLQKFHY
                     FLGDNYKVECPTGSGQSANLWQVAGEISQRLTHIFTRGADGRRPVFGATEKFQTDPHW
                     RDLIPFHEYFHGDNGAGIGASHQTGWTALVAKLIQQYGE"
     gene            complement(1567..>1823)
                     /locus_tag="VLM90_04405"
     CDS             complement(1567..>1823)
                     /locus_tag="VLM90_04405"
                     /inference="COORDINATES: protein motif:HMM:NF040249.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12231.1"
                     /translation="IDYPRHFSGHVKVFLDDGTMIEENQPHPRGGFEDPLPPSDIEAK
                     FRANAKLALPMSQVEKILDAVEHLELLRSARELSDLLMQP"
BASE COUNT          381 a          560 c          524 g          358 t
ORIGIN      
        1 cgtcgacccg ctcgaccacc ggaaccgccg cgtgcgcaac accgagtggt tccacatggt
       61 gaacgacgac gtcatctcga tgccggacaa gtgggagtac ccctggtacg cggcctggga
      121 cctcgccttc cactgcatcc cgctggcgct gctcgatccc gagttcgcca agcagcagct
      181 gatcctgctc gggcgcgagt ggtaccagca cccgaacggc cagattccgg cgtacgagtg
      241 ggccttcggc gacgtcaatc cgccggtgca cgcctgggcc gcctggcggg tttacaaagt
      301 cgaaatgaaa cggcgcggcg aaggcgaccg gaagtttctt gaacggatct tccagaagct
      361 catgttgaat ttcacctggt gggtcaaccg caaggacgcc gacggccgca atgtcttcca
      421 aggcggcttt ctcggtctcg acaatatcgg cgtcttcgac cgcagcgcgc cgctgcccac
      481 cggcggccat atcgagcagt ccgacggcac cagctggatg ggcatgtact gtttgaacat
      541 gctggcgatc gctttggaat tagccaggga caaccccgcc tacgaggatg tcgccagcaa
      601 gttcttcgaa catttcgttt acatctgcga agcgatgaac aatctcggcg gcgagaacat
      661 cgaactgtgg gaccgccagg acggtttttt ctacgacgtg ctcactttgc ccaacggcga
      721 gcgcaagccg ctcagagttc gctccatggt cggcctcata ccgctatttg cagtggaaac
      781 actcgatcca gagttgatcg agaagctgcc cggcttcaag cggcgcatgc aatggttcat
      841 cgagaaccgc ccggaactga gcgaacatat cgaaatcgaa gccaccgacg aagggccgcg
      901 ccgcttttta tcgctggtca accgccatcg gttgagacga gtactgcatt acatgctcga
      961 cgaaaaggag ttcttttcgc cctatggcat ccgcgcgctg tcgcactttc acgcagagaa
     1021 tccttataag ttcggcgtca acggcagcga ataccgcgtc gattacgagc cggcggaatc
     1081 gagcaccgga ctgtttggcg gcaactccaa ctggcgcggg ccgatctggt ttccggtcaa
     1141 ttttctgctg atcgaatctt tacagaagtt ccattacttc ctgggcgaca actacaaagt
     1201 tgaatgcccc accggctccg gtcaaagcgc caatctttgg caagtcgccg gcgaaatctc
     1261 ccaacgactg acgcatatct ttacccgcgg cgcagatggc cgccggccgg tcttcggcgc
     1321 caccgagaag ttccaaaccg atccccactg gcgcgatctg atcccgttcc acgaatattt
     1381 ccacggcgac aacggcgccg gcatcggcgc cagccaccaa accggctgga ccgcgctggt
     1441 ggcgaagttg attcagcaat atggcgaatg aaatggcggt cgtgtaacaa ccaccgcgca
     1501 tcgatgcgac tgacgatgtc ggcgttcgac gccggcaaag tggatcggca gacaccgccg
     1561 gcgccgtcat ggttgcatca acaagtcgct cagctcccgc gccgaccgca gtagttccaa
     1621 gtgctcgacg gcgtcgagta ttttttcgac ctggctcatc ggcagcgcca gtttggcgtt
     1681 ggcgcgaaac ttcgcctcga tgtcggaagg cggcaatggg tcttcgaaac cgccgcgcgg
     1741 atgcggctga ttttcctcga tcatggtgcc gtcatcgaga aatactttga catggccgga
     1801 aaaatggcgc ggatagtcga tcg
//
LOCUS       DATIRS010000354         3046 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_421735, whole genome shotgun sequence.
ACCESSION   DATIRS010000354 DATIRS010000000
VERSION     DATIRS010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3046
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_421735"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1623
                     /locus_tag="VLM90_04410"
     CDS             <1..1623
                     /locus_tag="VLM90_04410"
                     /inference="COORDINATES: protein motif:HMM:NF013481.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016625 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, iron-sulfur
                     protein as acceptor [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde ferredoxin oxidoreductase C-terminal
                     domain-containing protein"
                     /protein_id="HSQ12232.1"
                     /translation="GGTKVCAVFLSPMTNKTLGRGAASGYWAAYLKQAGYDGIILQGA
                     AKSPQYLFINDGKPELRDASRFWGKGSWDTEESLRDAVGIKDARVMGIGPAGEHRVNA
                     AMLCNDFNHSASHSGGAIFGSKMLKAIVVHGAKRPPLRDKAALVEAGLRWRKTLQQYA
                     LKDRYSTGHARHLEALPNNNMQSTLIGDHNRGFDQNRVVQRPCFQCARLCPWDVEIGE
                     GEFKGKVGHFNAGAEWLDTFWNLGVKGNATLYLAERINDLGIECGHFSFGAGVLFEAY
                     EKGLVTEKDCDGLRLEWGNVEAIDKLLEMTARRQGKWGNLIADGPLEVAEAIGGEALN
                     WVVHTKRGVPAMHDWRPHFSHMLREIVASGGMKPQGGGQANPPPDLKYREKWGPLDRD
                     DPTGWPQSNVNAEQYRQFVGIMGGCWFAQMHGKPDGLKSIVDSFNATTGWNFDLDEAM
                     LAGHRSAILQSIFGTQRGWIADHDWQQVWQRFLDPVPDGKYQGFTIAKWLPEMVREYY
                     QLSGRHEKTGRPYMDTLKLLGLEEFSEWAQLD"
     gene            1996..>3046
                     /locus_tag="VLM90_04415"
     CDS             1996..>3046
                     /locus_tag="VLM90_04415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12233.1"
                     /translation="MSTLNSELTANPYQADQKRNEVKAFTYDRWMESVGIPIHRGFFI
                     EDLRTVELGWWDERQCDAAFIQLTGQEGITSAIVMEIAPGKSLPPMKFALDELIYVMQ
                     GYGLSTVWSADGAPKKTFEWQDRSLFHVASNSNLHLANMRGDKPVRLLRYSYLPLATS
                     LVTEPQFYFNNPYQKAAASTQESDTYSQAKLVENGDPELAWGSSRVYWHGNFFPDMAA
                     WDKLTTNARGGMSVIIMFPSSEMSCHMSVFATRTYKKAHRHCPGRVIVIPAGEGYSVL
                     WEEGKEKIVAPWHEGSMFVPPDKWFHQHLNAGGSPARYLALHPPRQFRGHAEKVQDRA
                     KDMIEYIDEDPWIREK"
BASE COUNT          658 a          837 c          918 g          633 t
ORIGIN      
        1 ggcgggacga aagtgtgcgc ggtgttctta agtccaatga ccaacaagac cctcggtcgc
       61 ggcgcggcga gtggttactg ggccgcctat ctcaagcagg cgggttacga cggtatcatt
      121 cttcaagggg cggcgaagtc gccgcaatat ctgttcatca acgacggtaa gcctgagctg
      181 cgcgatgcga gcagattttg gggcaaggga tcgtgggata ccgaagaatc gctgcgcgac
      241 gcggtcggca tcaaagacgc cagggtcatg ggcatcggtc ccgccggcga gcatcgagtc
      301 aacgcggcga tgctgtgcaa tgacttcaat cattcggcat cgcacagcgg cggcgcgatc
      361 ttcggttcga agatgttgaa ggccatcgtc gtccacggcg ccaagcggcc gccgctgcgc
      421 gataaagcgg ccctggtcga agccggtctg cgctggcgca agacgctgca gcagtacgcg
      481 ctcaaagatc gttacagtac cggccatgcg cgccatctcg aagcgctgcc caacaacaac
      541 atgcagagca cgctgatcgg cgatcacaac cgcggcttcg atcagaatcg cgtcgtgcag
      601 cgcccctgct ttcaatgcgc gcggctttgt ccgtgggacg tggaaatcgg cgaaggcgag
      661 tttaaaggca aggtcggcca ctttaacgcc ggcgccgagt ggctcgatac tttttggaat
      721 cttggcgtca aaggcaacgc gacgctttat ctcgccgagc gcatcaacga tctcggcatc
      781 gagtgcggcc atttttcctt cggcgccggc gtgttgttcg aagcttacga gaaaggttta
      841 gtcaccgaga aagattgcga cgggctgcgc ttggagtggg gcaatgtcga agcgattgat
      901 aaattattag agatgacggc gcggcgccag gggaagtggg gcaacttgat cgccgacggc
      961 cccctcgaag tggccgaagc gatcggtggc gaggcgctga attgggttgt ccataccaag
     1021 cgcggcgtcc cggcgatgca cgattggcgc ccgcatttct cacacatgct gcgcgagatc
     1081 gtcgccagcg gcggcatgaa accgcagggc ggcggtcaag ccaatccgcc gccggatctg
     1141 aagtatcgcg agaagtgggg accgctcgac cgcgacgatc ccaccggctg gccgcagtcc
     1201 aacgtcaatg cggagcagta ccgccagttc gtcggtatca tgggcggctg ctggttcgcc
     1261 caaatgcatg gcaagcccga cggcctgaaa agtatcgtcg attcgttcaa cgcgacgacg
     1321 ggctggaact tcgatctcga cgaagcgatg ttggccggac accgcagcgc gatcctgcag
     1381 agcatttttg gcacccagcg cggctggatc gccgatcacg actggcagca agtgtggcag
     1441 cgctttctcg acccggtgcc cgacggcaaa taccaaggct tcaccatcgc caaatggctc
     1501 cccgaaatgg tccgcgaata ttaccaactc tccggccgcc acgaaaaaac cggccggccg
     1561 tacatggaca cattgaaatt attgggcttg gaagagttca gcgaatgggc gcagttggac
     1621 tgagcgtgac gctttcttgg gtttggagtt ttgtaggatg ggtggaggcg ctgcgccgat
     1681 acccatcgtt tgtggttcac cacgaagaat ggtgtcgcag ttccgagtta ctggagaatg
     1741 aatcgggacg tatcgcgcgt aaattcatca gtatttttaa ctcagtcagg atttggatgt
     1801 tttgacttgg ggttcggact atcaacagtc atattcacgt ctgactctcg tccttcttta
     1861 ataatcgggt cgttgttttt aatactctgg cgtttcacat ctgtcagcat tttgccgctg
     1921 atcttgctct gaagtcgact tgtgcgatag aaaaaccatt cggtgtattg aaacagacta
     1981 tgaaggagct gcgctatgtc cactttgaat tcagagctta ctgccaaccc gtatcaagct
     2041 gaccaaaaga ggaacgaggt taaagccttt acctacgacc gctggatgga gtcggtgggg
     2101 attccgattc accgcggttt ctttatcgaa gatttgcgca cggtggagct gggctggtgg
     2161 gacgagcgcc agtgcgacgc agcgttcatc cagttgaccg gccaagaagg tatcacctcc
     2221 gcgatcgtta tggagattgc gccggggaaa tcgttgccgc cgatgaaatt cgctcttgac
     2281 gagctgattt acgtcatgca aggctacggc ttgagcacgg tttggagcgc cgacggcgcg
     2341 ccgaagaaaa cttttgaatg gcaagatcgc agtttgtttc acgtcgcttc caacagcaat
     2401 ttgcacttgg ccaacatgcg cggcgacaag ccggtgcgat tattgcgata tagctatctg
     2461 cccctggcca cctcgctggt caccgaaccg caattctatt ttaacaaccc gtatcagaag
     2521 gccgctgctt ccacccaaga aagcgatacc tattcccaag ccaagctcgt cgaaaacggc
     2581 gacccggagc ttgcctgggg cagcagtcga gtctactggc acggcaactt tttccccgac
     2641 atggcggcgt gggacaagct cacgaccaac gcgcgcggcg gcatgagcgt gatcatcatg
     2701 tttcccagct cggaaatgtc ttgccatatg tcggtgtttg ccacgcgcac ttacaagaag
     2761 gcccatcgcc actgcccggg acgggtcatc gtgattccgg cgggcgaagg ctactctgtg
     2821 ctctgggagg aaggcaagga aaagattgtc gcgccgtggc acgagggcag catgttcgtg
     2881 ccgcccgaca aatggtttca ccagcactta aacgccggcg gcagtccggc gcgctatctt
     2941 gcgctgcatc cgccgcggca gtttcgcggc cacgcggaaa aggtccagga ccgcgccaaa
     3001 gacatgatcg aatatattga tgaagatcct tggatccgcg agaagt
//
LOCUS       DATIRS010000355         3979 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_814709, whole genome shotgun sequence.
ACCESSION   DATIRS010000355 DATIRS010000000
VERSION     DATIRS010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3979
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_814709"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..368)
                     /locus_tag="VLM90_04420"
     CDS             complement(<1..368)
                     /locus_tag="VLM90_04420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12234.1"
                     /translation="MKTLKAILFIGLVAMGAGVLAQSKDAAAPHVDLIAIDGSINPAV
                     DDFIREGIARAKHNGARALIIQLDTPGGLLTSTRTIVKEMLGAQVPVMVWVGPSGAGA
                     GSAGVFITLAAHVAAMAPGT"
     gene            complement(355..1119)
                     /locus_tag="VLM90_04425"
     CDS             complement(355..1119)
                     /locus_tag="VLM90_04425"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: protein motif:HMM:TIGR00758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HSQ12235.1"
                     /translation="MSEPSDAEELAALTTTLKRHLERRQRSGLRYLPKQSPVAQKNSN
                     AAREPSVMAGTEVDMLADYSAALGAGSLPELRAAIGDCQRCKLCSGRTHIVFGVGNPR
                     AKLMFVGEGPGHEEDLQGEPFVGRAGHLLTDIITKGMGLKREDVYICNVVKCRPPENR
                     NPEPAEVSACEPFLKKQIDIVRPQIIVGLGKFAVQTLLNSKAPIGKLRGTWASYHGIK
                     LMPTFHPAYLLRNPVDKKLVWEDIKLVIKEMRGEDA"
     gene            complement(1444..2649)
                     /gene="coaBC"
                     /locus_tag="VLM90_04430"
     CDS             complement(1444..2649)
                     /gene="coaBC"
                     /locus_tag="VLM90_04430"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015939 - pantothenate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HSQ12236.1"
                     /translation="MAEIDKPKTVVLGVTGGIACYKAVELVRLLVKAGLRVQVIMTRG
                     ALEFVTALTFQTLSGHPVATETFNLTQESEIGHINLADSADLFVVAPATANIIGKIAN
                     GIADDLLTTVIMATQAPVLIAPAMNIHMYENPILQENLRKLGRVGYHILEPAEGFLAC
                     GYEGKGRLPDPEKIADEVERLLGKKDLVGERLLITAGPNREPLDPVRYLSNRSSGKMG
                     YALARAAARRGAEVVLVSGPTALDCPAGVRLVPVVTAADMRGAVVKEFATATAVVMAA
                     AVADYRPVVTADRKIKRGKGPIELRLEPNPDIVKELGQNKDGKVLIGFAAETEDLTAN
                     AAKKLREKNLDMIVANNVADAGSGFDGDTNIATILDRTGASQSLPLMSKDELADRIYD
                     HYLALKNRR"
     gene            2976..3815
                     /locus_tag="VLM90_04435"
     CDS             2976..3815
                     /locus_tag="VLM90_04435"
                     /inference="COORDINATES: protein motif:HMM:NF016236.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HSQ12237.1"
                     /translation="MYKSYGRWLLKMWMAGALASSIGLLAIPGGTAQAEEIAAESEST
                     DYPEVIVALAADAGAIDVEMATQPTMTAAAAGDDFDQDPWEGFNEKMFNFNREILDRF
                     LLKPIATGWDFVFPDMVQRGFRNMFDNLDVVRRVVNNTLQLKLAGAGIELVRFTVNST
                     VGVAGFFDIAKDAFGIEQKDEDTGQTFGTWGMGPGPYLVLPLLPPLNVRDGVGYAFDA
                     AMFPPAYFIPWWGSLAGTFTETVNERSLNLDRFERVAETTVDLYGAVRNAYLQRRAAA
                     IKQ"
BASE COUNT          803 a         1183 c         1133 g          860 t
ORIGIN      
        1 ttggtgccgg gcgccatcgc cgcgacatgc gcggccagcg tgataaacac tcccgccgaa
       61 ccggcgccgg cgccgctcgg accgacccaa accatgaccg gcacctgcgc gccgagcatt
      121 tccttgacga tagtgcgggt cgaagtgagc agcccaccgg gagtgtcgag ctgaatgatc
      181 agcgcccgcg cgccattatg cttcgcccgc gcgatgcctt cgcggatgaa gtcgtccacc
      241 gcaggattga tgctgccatc gatggcgatc aaatcgacat ggggcgccgc cgcgtccttg
      301 gactgcgcca acacgcccgc gcccatggcg actaggccaa tgaatagaat tgctttaagc
      361 gtcttcacca cgcatctctt tgattaccag tttaatatct tcccacacca gctttttgtc
      421 caccgggttg cgcagcaagt aagccgggtg gaacgtcggc atgagcttga tgccgtggta
      481 actggcccaa gtgccgcgca gtttgccgat cggcgctttg ctattgagta gcgtttgcac
      541 ggcgaatttt cccagaccaa cgatgatttg cggcctgacg atatctatct gcttttttag
      601 gaacggctcg caggcagaga cttcggccgg ttcgggattg cggttctccg gcggccggca
      661 tttgaccaca ttgcaaatgt aaacatcttc gcgcttaagc cccatgccct tggtgatgat
      721 gtcggttaac aggtggccgg cccggccgac gaagggttcg ccttgcagat cttcttcgtg
      781 gcccggccct tcgccgacaa acatcagctt ggcgcgggga ttgccgacgc caaagacgat
      841 atgggtccgc cccgaacaaa gcttacagcg ctggcaatcg ccgatggcag cgcgcaactc
      901 tggcaaactc ccggctccca gggcagcgct gtaatcggca agcatgtcta cctctgtacc
      961 tgccatgacg ctcggttctc gagctgcatt cgagtttttc tgtgcaactg gcgattgttt
     1021 aggcaagtaa cgaagcccac tgcgctggcg gcgctcgaga tggcgcttga gcgtggtggt
     1081 taacgcggcc aattcttcgg cgtcgctcgg ctcggacatc agcgcgatcc tttcaccgcc
     1141 ggatcgtacc acccgacacc ggcgcgaagc aatacgaagt tagcccaatg attgaacaat
     1201 ttgtcgccgc ctcgcttcgg caatagcgga atccggaatc gatgcgctga tcggcattgt
     1261 tggtcgaagc gagaacgact ttcaggagat gggatatagc gggggtcgaa attcacccga
     1321 cggccgccgg agagcggatc gcgaaactca ttttcgatgg cctgggttgg cagtttggta
     1381 gcggttaaca gtgtcagatc gacaatcagg aaaacgacga aatattctgc cggcctgccg
     1441 agttcaacgg cggtttttga gggcgaggta atgatcgtag atgcggtccg ccaactcatc
     1501 tttactcatc agcggcagcg actgcgacgc gccggtgcgg tcaagaatag tcgcaatatt
     1561 ggtgtcgccg tcaaacccgc tgccggcgtc ggcaacattg ttggcgacga tcatgtcgag
     1621 atttttttcg cgcagcttct tggcggcgtt ggcggtcaga tcttcggtct cagcggcaaa
     1681 gccgatcaac actttgccat ctttgttctg gccaagctct ttgacgatat cgggattggg
     1741 ttccaggcgc agctcgatgg gacctttgcc gcgcttgatc ttccgatccg ccgtcaccac
     1801 cggccggtaa tcagctactg ccgccgccat caccaccgcc gtcgccgtgg cgaactcttt
     1861 gaccacggcg ccacgcatgt cggcggctgt gaccacagga accaggcgaa cgccggcagg
     1921 acagtccagc gcggtgggtc cactcaccag caccacctct gcaccccgcc gtgccgccgc
     1981 ccgtgccagc gcataaccca tctttccgga agaccggttt gacaggtagc gcaccggatc
     2041 gaggggctcg cgattgggcc cagcggtgat caacagccgc tcacccacca agtccttttt
     2101 tccgagcaag cgctcgacct cgtcggcaat cttttccgga tcgggcagcc ggcccttgcc
     2161 ttcgtagccg caagcgagaa aaccttcggc cggctctaaa atatggtaac cgacccggcc
     2221 gagcttgcgc agattctcct gcaggatcgg attctcatac atatggatat tcatcgccgg
     2281 cgcgattaac accggcgcct gggtcgccat gatcaccgtc gtcaaaagat cgtcggcgat
     2341 gccgttggcg atcttgccga tgatgttggc cgtcgccggc gcaaccacga acagatcggc
     2401 cgagtcggct aaattgatat ggccgatttc agactcctgc gtcaggttga aggtttccgt
     2461 agccacagga tggccggaaa gggtttgaaa ggtcagcgct gtgacaaact ccagggcgcc
     2521 gcgggtcatg atcacctgaa cgcggagacc ggccttgacg agtaaacgca ccagctccac
     2581 cgccttgtag caggcgatgc cgccggtcac cccaagcacc acggttttcg gtttgtcgat
     2641 ttcagccaca gcgacaaact agccgattca actaattgct gcaaactttt acctagccag
     2701 gccaaaagcg actcggctgc ccgacagtgt gaccaagttt acagtgttgc gacttttagc
     2761 acccgcggtt gtcacagcat cgtcagcgtc agacggtttc tttgtctcta attccctcta
     2821 tttgctcgcg gcggcgttaa aacagagagc cgatcgctgg catgattttg gctcacatag
     2881 ctgcattcgg tggcacgata tgatagtcag tgtgtttaac ttgaccgttt actgtagctt
     2941 aatatttgaa atccatctgg gacaaggaga aggggatgta taaatcatat ggccggtggt
     3001 tattgaaaat gtggatggct ggcgcgctcg ccagttcgat tggcctgctg gctatccccg
     3061 gcggaaccgc acaggcagaa gagattgccg ctgagtcgga atccaccgac tatccagaag
     3121 tgatcgtcgc gctggctgcc gacgccggcg ccatcgacgt tgagatggcc acccaaccga
     3181 ccatgacagc cgccgccgcc ggggatgact tcgatcagga cccttgggaa ggcttcaacg
     3241 aaaagatgtt caacttcaac cgggagatcc tcgatcgctt tctgttgaag ccgatcgcca
     3301 ccggctggga ctttgttttt cctgacatgg tacaacgcgg atttcgcaac atgttcgata
     3361 acctcgacgt cgtccgccga gtggtcaata acaccctgca attgaagctt gccggcgccg
     3421 gcatcgagct ggtgcgattt accgttaaca gtacggttgg ggtcgcgggc tttttcgaca
     3481 tagccaagga tgccttcggc atcgaacaaa aagacgaaga caccggccag accttcggca
     3541 cctggggcat gggaccgggt ccctatctag ttctgccgct tctgccgccg ctgaacgttc
     3601 gtgacggcgt cggttatgcc ttcgacgcgg cgatgttccc accggcttac tttatcccct
     3661 ggtggggctc cctcgcaggc acttttaccg agacggtcaa cgagcgctca ctcaatctcg
     3721 accgcttcga gcgggtggcg gaaaccacag ttgacctcta cggcgccgtg cgtaacgcct
     3781 acttgcaacg gcgcgctgcc gcgatcaagc aatagttatt cgcctccggt tcggaatcaa
     3841 cgcggaagat cggcaacggt cttccgcgtt gctgttttag ggaaatgccg cgcggcaatc
     3901 ttcggtcacc tgtggttgcc agtacccgtg agttcaaatc cgcgcacttt cgcggtagta
     3961 gactattaat tcaagcgca
//
LOCUS       DATIRS010000356         1956 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1306276, whole genome shotgun sequence.
ACCESSION   DATIRS010000356 DATIRS010000000
VERSION     DATIRS010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1956)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1956)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1956
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1306276"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..220
                     /locus_tag="VLM90_04440"
     CDS             <1..220
                     /locus_tag="VLM90_04440"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSQ12238.1"
                     /translation="DVIVMDVNMPGMNGIEATRRIVEDQPGVIVIGLSFASDPSVQAA
                     MKNAGAYACVTKERAAEDIYRAIVDAVN"
     gene            complement(300..1286)
                     /locus_tag="VLM90_04445"
     CDS             complement(300..1286)
                     /locus_tag="VLM90_04445"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ12239.1"
                     /translation="MRQIKFGVGIYGTENAREGVALARTAEALGYERFWIGDSHMIWR
                     ELYVLAGAIAMATNKIAIGPGVTHPAVRHLTVTASAMATLHELTAGRVFLGFGIGASG
                     PANVGMQPVTMTEFEANIVNLKRLLRGEPVQFNGTEAQCLFPCGEIPIYIGTRAPQVM
                     KMACRLTAGFIHAGASDSLIALVQQIQSYAQAAGRKSGEVEFIYRLPCAIDDDTAQAR
                     SAVKGVVARTAMTQLGRLYDRGQLADEEDRSAIERMRQEYDTYHHMDAAHGYLVREQW
                     LERFALAGRADHLRAKVQEFLAAGIDELTIIPCGPSKQTTLERFARDIMDKI"
     gene            1544..>1956
                     /locus_tag="VLM90_04450"
     CDS             1544..>1956
                     /locus_tag="VLM90_04450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12240.1"
                     /translation="MATADKILHLATRSGWYRFELRDGKWTETEKALTFFSVSCLQVD
                     PANPRRIFAGTENFGLFVSADGGDTWRRPEPNLPRLSTWSMLALPEKLFVGTGPAALF
                     SSQSTDSWRELEEVLLGAMGGTFPPNPESAPRTRYL"
BASE COUNT          386 a          551 c          592 g          427 t
ORIGIN      
        1 cgacgtcatc gtcatggacg ttaacatgcc ggggatgaat ggcatcgagg cgacccggcg
       61 catcgttgag gaccagcccg gcgtgatcgt catcgggcta tcgttcgcca gcgatccgtc
      121 cgtccaagcg gcgatgaaaa atgccggcgc ctatgcttgc gtgaccaagg agcgggcggc
      181 ggaggatatc tatcgagcga tcgtcgatgc cgtgaattga gagccgccag gtaagagatg
      241 atcggcccca cgatataaag aatgttcacc gacgaaggcg agaaagacat cgatctcagt
      301 cagattttat ccatgatatc acgagcaaat ctttcgaggg tcgtctgctt cgacgggccg
      361 cacgggatga tcgtcagctc atcgatgccg gcggcgagga actcttgcac tttcgctctg
      421 aggtgatctg ccctgccggc taaagcaaag cgctcgagcc attgttcgcg aaccagatag
      481 ccgtgcgcgg cgtccatgtg atggtaggtg tcgtattctt ggcgcatgcg ttcaatagcg
      541 ctgcggtctt cctcatcagc aagctggccg cggtcgtaca gacggcccaa ttgcgtcatg
      601 gcggtgcgcg ccacgacccc tttgacggcg ctcctggcct gcgccgtgtc atcgtcgatg
      661 gcgcagggca aacgatagat gaactcgact tctccagact ttctccccgc cgcttgggca
      721 tagctttgga tctgctgcac caatgcgatt agcgaatcgg acgcgccggc gtggatgaat
      781 cccgccgtca ggcggcaagc cattttcatg acctgcggcg cgcgggtgcc gatgtagatg
      841 ggaatctcgc cgcagggaaa aagacattgg gcttccgtgc cattgaattg caccggctcg
      901 ccgcgcagga gtcgcttcaa gtttactatg ttggcttcga attcagtcat cgtcaccggt
      961 tgcatgccga cgttggctgg tccgctggcg ccgatgccga agccgagaaa cacgcggcct
     1021 gcggtcaact cgtgcaaggt cgccatggcg ctggcggtga cggtgagatg gcgtaccgcc
     1081 gggtgggtga cgccggggcc aatggcgatt ttgttcgtcg ccatggcgat ggcgccggcg
     1141 aggacgtaga gctcgcgcca gatcatgtgc gaatcgccga tccagaatcg ttcgtacccc
     1201 agtgcttcgg ctgtgcgtgc caacgcgacg ccctcgcgag cattctccgt gccgtagatg
     1261 ccaacgccaa attttatttg tcgcattatt ggcctcgtgt cgattgttca gcttgtcgag
     1321 ggcttatttt gcaccacgaa gggcgcgaag gccacgaagg ccggaaaata ttctcagttg
     1381 agatccctcg ctgcgctcgg ggtgacagat tcgcacttct gtcatttcga gcgtagcgag
     1441 aaatcccttc atcgaattag ataagccgat aactctttgc cgctccagct tgacgacaaa
     1501 accgttcccg atgtactcct caatagactt ggaggagtag ggattggcaa ctgccgataa
     1561 aattttgcat ctggcgacgc gctcggggtg gtaccgcttc gaattgcgcg acggtaagtg
     1621 gacggaaaca gagaaagcac tgacgttttt ttcggtcagt tgtctgcagg tcgaccccgc
     1681 taaccctcgg cggatctttg ccggcaccga aaacttcggc ttgttcgtca gcgccgacgg
     1741 cggtgacacc tggcggcggc cggaacctaa tctgccgcga ttatcgactt ggtcgatgct
     1801 cgccttaccg gaaaagcttt tcgttggcac tgggccggcg gcgcttttca gttcccaatc
     1861 gactgactca tggagagaac ttgaagaggt gctcttgggc gccatgggcg gcacctttcc
     1921 acctaatccg gaatccgcgc cgcggacaag gtatct
//
LOCUS       DATIRS010000357         2137 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1011727, whole genome shotgun sequence.
ACCESSION   DATIRS010000357 DATIRS010000000
VERSION     DATIRS010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2137)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2137)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2137
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1011727"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(92..1081)
                     /locus_tag="VLM90_04455"
     CDS             complement(92..1081)
                     /locus_tag="VLM90_04455"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12241.1"
                     /translation="MLTKIIGFLLPLVFVLAAPVASMAASASTSMRLLYPSFAGSWAT
                     AWIAKEAGYFSAEGLDVELVRVGGSSRMVAALLGGSAPIIQAGAVEALSANAAGSDVV
                     IIGSTGTVSPFRLLARPEIKQPADLKGKKARITTFGSTSDQVVRIALKHFNLEANKDV
                     AILTFGAQPEAFAALTNGVVQVAALSYPLYPKAQRMGMRELIAFADLGVEDINGTVIT
                     TRTFVNQQRDTALRFMRAFTRGMQRYRTDKEFSKKVLGKYGKLNDEEILEGTWQDYAP
                     TLQKSPRPSLKAIQFMIENQYPGKKPMPKPEQLVDLSIVDQLEKSGFIDSVNK"
     gene            complement(1286..>2137)
                     /locus_tag="VLM90_04460"
     CDS             complement(1286..>2137)
                     /locus_tag="VLM90_04460"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF013413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070573 - metallodipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane dipeptidase"
                     /protein_id="HSQ12242.1"
                     /translation="AVDAGVFAIRGDLGTIRTDASGRRYEHRVPKPGEQFRRGEEQLA
                     PLLKAAETGQLALAKSPADILEAKQRDTPAAVLALEGCDPLEGDLSRAKLFYDRGVRV
                     MQLLHYRINEIGDIQTAEPRHNGLTPFGRALVQELNRLGVVIDTAHASSGTLDGVLAA
                     SRVPVIFSHTAPRVQRANSRRLEDEAIKAIAKKGGIVGVWPTLGSRDGFEVFLRRLDY
                     MKQLVGAEHFGVATDIFGLRGRTAIPTHKEFALLPAGLLKRGYSESDTAKIVGGNFMR
                     LFREVAA"
BASE COUNT          406 a          619 c          665 g          447 t
ORIGIN      
        1 tgatattgcc gaaccgtcgc gccttgcttg gctagcggga gtgcaaataa attctgcgca
       61 gcgatctggc aagccaacca ggcgcattaa actacttgtt gaccgaatcg ataaaaccgc
      121 ttttttccaa ctgatcgacg atcgatagat cgactaactg ttcgggtttc ggcatgggct
      181 tcttgccagg gtattgattt tcgatcatga actggatcgc cttcagcgac gggcgcgggc
      241 ttttttgcag tgtcggcgcg tagtcttgcc aggtgccttc gaggatctct tcgtcgttca
      301 acttgccgta tttgcccagt acttttttgc tgaattcctt gtcggtgcgg tagcgctgca
      361 tgccgcgggt gaaagcgcgc atgaagcgca aggcggtgtc gcgctgctgg ttcacgaacg
      421 tgcgggtggt gatcaccgtg ccattgatgt cctcgacacc gaggtcggcg aaggcgatca
      481 attcgcgcat gcccatcctc tgcgccttgg gataaagcgg gtagctcagt gccgccactt
      541 gaacgacgcc gttggtcagc gcggcgaagg cttcgggctg cgcgccgaag gtgaggatgg
      601 cgacatcttt attcgcttcg agattgaaat gctttagggc gatgcgcacg acttggtccg
      661 acgtagagcc gaacgtggtg atgcgggcct tcttgccttt caagtccgcc ggctgtttga
      721 tctcgggccg ggcgagcaga cgaaacggcg aaaccgtgcc ggtggagccg atgatgacga
      781 cgtcgctgcc ggcggcgttg gcggacaatg cctcgacggc gccggcctga atgatcggcg
      841 cgctgccgcc gagcagggcc gcgaccatgc ggctgctgcc gccgacgcgg accagttcga
      901 catcgagtcc ttcggcgctg aagtatcccg cctccttggc gatccaagcg gtcgcccaac
      961 tgccggcgaa acttggatag agaagccgca tggaggtcga tgccgaagcc gccatgctgg
     1021 cgacaggagc ggcgaggacg aagactagcg gcagtaagaa gccgataatt ttagttagca
     1081 tggttcctcc gtgggcttat ctaatatgag tcgcgcaaca atgccaaccg atcggtggtg
     1141 gttcatttag atagagatct ctcacttcgt tcgagatgac acggcgactt ttctgctgtc
     1201 atttcgagcg aagcgagaaa tctttttcag gttgaaacct tccgcccgaa tcaaactgaa
     1261 ccactaccaa ccgatccgtg cgctgtcatg cggcgacctc gcgaaacaag cgcataaagt
     1321 tgccgccgac gatcttggcg gtatcgctct ccgagtagcc gcgtttgagc aaacccgcgg
     1381 gcaggagggc gaactcctta tgggtcggga tcgccgtgcg cccgcgcaaa ccgaagatgt
     1441 cggtggccac gccgaaatgt tcggcgccga caagctgctt catatagtcc aaccggcgca
     1501 aaaaaacttc gaaaccatcg cggctgccca gagtcggcca gacgccgacg ataccgcctt
     1561 tcttggcgat ggctttgata gcttcgtctt cgaggcggcg cgaattggcg cgctgcactc
     1621 gcggcgccgt gtgggaaaaa attaccggaa cgcggctggc cgcgaggacg ccgtcgagcg
     1681 tacctgacga ggcatgggcg gtgtcgatga cgacgccgag ccggttgagt tcctgcacca
     1741 gcgcccggcc gaagggtgtc aatccgttgt ggcgcggctc ggcggtttgg atatcgccga
     1801 tctcgttgat gcggtagtgc agaagttgca tgaccctcac cccgcgatcg taaaataact
     1861 tcgcccgtga caagtcgccc tctaatggat cgcagccttc gagggccagc accgccgcgg
     1921 gcgtatcccg ctgcttcgct tcaagtatgt ccgcgggcga tttggctaaa gcgagctggc
     1981 cggtctcggc ggccttgagc agcggcgcca attgctcctc gccgcggcga aactgctcgc
     2041 ccggtttagg cacgcgatgc tcgtagcgcc ggcccgatgc gtccgtgcgg attgtcccca
     2101 gatctcctct gatggcgaac acgcccgcgt cgacagc
//
LOCUS       DATIRS010000358         1571 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_618425, whole genome shotgun sequence.
ACCESSION   DATIRS010000358 DATIRS010000000
VERSION     DATIRS010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_618425"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..277
                     /locus_tag="VLM90_04465"
     CDS             <1..277
                     /locus_tag="VLM90_04465"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HSQ12243.1"
                     /translation="IHLDNIVRMTTVLAAAKKSFGVRVYPDAPHGFLNDTMPGRYRQP
                     QSDAAWNQITSFLKSVFAGEWKKDRAIWRFEADSSLDYDFTAMKRWE"
     gene            701..1291
                     /locus_tag="VLM90_04470"
     CDS             701..1291
                     /locus_tag="VLM90_04470"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSQ12244.1"
                     /translation="MWFSLTNFLIGFAISVVLGVVMGVPMGWYRAVHKTFDPLLSGIY
                     ATPLIALLPLIIMMFGLGSVSKIIMTILAAVFPILINTMVGIANTDNRLITMSRAFGA
                     RDSQIFMKVSLPGSLPYIVAGMRVALGRALVYIVVAEQYGAATGLGYLSSVAAQRFQM
                     AAMFVPIVIIAGLGAGLNETLKAIEHRLDKWKPQKA"
     gene            1315..>1571
                     /locus_tag="VLM90_04475"
     CDS             1315..>1571
                     /locus_tag="VLM90_04475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12245.1"
                     /translation="MKLTGKIVALGFFVLVLTEVSHGADALRKMTVGQAGVNPGAGLF
                     SIAVNQSFYKKHGLDVEIIKTNTTAAVQAMLANKMQMATGAG"
BASE COUNT          327 a          480 c          425 g          339 t
ORIGIN      
        1 gattcatctc gacaacatcg tccgcatgac cacggtgctg gccgcggcca agaaaagctt
       61 cggcgtccgc gtctatcccg acgcgccgca cggattcttg aacgacacca tgcctggccg
      121 ctaccgccag ccccagagcg acgccgcatg gaatcagatc acgtcgttct taaaatcggt
      181 attcgccggc gagtggaaaa aagaccgggc gatctggcgt ttcgaagccg acagctcgct
      241 ggattacgat ttcaccgcga tgaagcgttg ggagtagcgc gcgttgagcg ccatgacaga
      301 ttccagattc catattacag atgcggacat cggacgaaat tttggaattt ggaatctgta
      361 atttgtaatt tccgctgcca agcaagcttg acagcggaca gcacggcgaa tacattcgcg
      421 tcacccgatc ccgaaggagc gtgccacggc aaaaccagaa ccagaagcct tcgatctagt
      481 ctccgtcgac gaatcgaatc cgctaaccac caaccggctg tggcagcgta cccgcgagat
      541 tctatccgat tggctcggcg tcatcggcgt cgtcggcttt ttcctcggct gggagatctc
      601 gacccggctg gagatcatca atcctttcta ttttccgccc ttcagtaaga tcattgccaa
      661 aggctacgaa ctgttcgcca acggctccat ctgggagcat atgtggttta gcctgaccaa
      721 tttcttgatc ggctttgcca tctcggtggt gctcggcgtg gtcatgggcg tgcccatggg
      781 ctggtaccgc gcagtacaca aaaccttcga tccgctcctc tccggcattt acgccacgcc
      841 gctgatcgcc ttgctgccgc tgatcatcat gatgttcggc ttgggctcgg tgtcgaaaat
      901 catcatgacg atcctcgccg cggtgtttcc gatcctgatc aacaccatgg ttggcatcgc
      961 caacaccgac aaccgtttga tcaccatgtc gcgggcgttc ggcgcgcgcg acagccagat
     1021 cttcatgaaa gtgtcgctgc ctggctcgct gccttatatc gtcgccggta tgcgcgtcgc
     1081 cttgggccgc gcgcttgtct acatcgtcgt cgccgagcaa tacggcgcgg ccaccggtct
     1141 cggctatctg agttcggttg cggcgcagcg ctttcagatg gccgcgatgt tcgtccccat
     1201 cgtcatcatc gccggcctgg gcgccggctt gaacgagacc ctcaaggcca tcgagcaccg
     1261 gctcgacaag tggaaaccac aaaaggctta aaccaatcgt ttcgggagga ttgcatgaag
     1321 ttgactggaa aaatcgtcgc cctcggtttc tttgtcctgg tgctaaccga agtcagccat
     1381 ggcgccgacg ccctgcgcaa aatgaccgtc ggccaggccg gcgtaaaccc aggcgctggg
     1441 ctattctcca tcgccgtcaa tcagagtttc tacaagaagc atggcctcga cgtcgaaatt
     1501 attaaaacca acaccaccgc cgcggttcag gcgatgctcg ccaataaaat gcagatggcc
     1561 accggcgcgg g
//
LOCUS       DATIRS010000359         1646 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1601436, whole genome shotgun sequence.
ACCESSION   DATIRS010000359 DATIRS010000000
VERSION     DATIRS010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1646
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1601436"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..574
                     /locus_tag="VLM90_04480"
     CDS             <1..574
                     /locus_tag="VLM90_04480"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF044283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ12246.1"
                     /translation="TFMYRNNPILMGAIPGVPPDDDSFYRGTYRSGAVWNQLEAAGIP
                     EVKGVWAHEAGGSRLWLTVAIKQLYGGHSKPAGLIASQCHAGAYLGRFVIVVDDDIDP
                     SNTDDMIWAMSSRCEPEADIDILRRCWSGPLDPVIHPTKKGFNSRAIIDATRPYEWIK
                     DFPPVAESSKEVLDATAKKWGAELFGNGKK"
     gene            709..>1646
                     /gene="mutL"
                     /locus_tag="VLM90_04485"
     CDS             709..>1646
                     /gene="mutL"
                     /locus_tag="VLM90_04485"
                     /inference="COORDINATES: protein motif:HMM:TIGR00585.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HSQ12247.1"
                     /translation="MKIQILSDEMASRIAAGEVVERPASVVKELMENYLDAGATEIFV
                     WLEKSGTAAIRITDNGEGMTPEDLALAVERHATSKLKEDDDLFRIATLGFRGEALPSI
                     GSIAKMDISSRPVFSVSGAKLSVDGGKKGEVHAAAAALGTTIEIRDIFYNTPARRKFL
                     KAPATELSHVCDVVNRLALANPQVHFRLQHDGRTVADYVAVKQERDRLQQVLGIEVAK
                     SLKPFSFTQGEMTVSGFLSTAPTSYPNARYLFTFVNRRYVRDKVLTHAVLQGYDTLLM
                     KGQYPAVVLFLEIPYAEVDVNVHPAKYEVRFRRQSDV"
BASE COUNT          332 a          466 c          501 g          347 t
ORIGIN      
        1 gaccttcatg taccgcaaca atcccatcct gatgggcgcg atccccggcg ttccccccga
       61 cgacgattcg ttctatcgcg gcacgtatcg ttcgggcgcg gtgtggaacc agctcgaagc
      121 cgccggcatt cccgaagtga agggtgtgtg ggcgcacgag gccggcggca gccgtctctg
      181 gctcaccgtc gcgatcaagc agctctatgg cggtcattcc aaaccggctg gcctcatcgc
      241 ctcgcaatgt cacgccggcg cttatctcgg ccgtttcgtg atcgtcgtcg acgatgacat
      301 cgatccatcg aataccgacg acatgatctg ggcgatgtcg agccggtgcg aacccgaggc
      361 ggatatcgac atcctgcgcc gttgctggag cggaccgctc gatccggtca ttcatccgac
      421 caagaagggt ttcaactcgc gcgcgatcat cgacgcgacc cggccctatg aatggatcaa
      481 agacttcccg ccggttgccg aatcgagcaa ggaagtgctc gatgccaccg ccaaaaaatg
      541 gggtgcggag cttttcggca acggcaagaa atagttattc gttggtttaa cttaaaaagg
      601 gcaagccgct gattgcgcgc ttgccctttt tttatactcg cagaagagac gtgatcgttg
      661 accctatgtt ttagtccagg ttatgtatta attaagcgag tcgaacacgt gaagatccaa
      721 attctctcgg acgaaatggc cagccggatt gccgccggtg aagtggtcga gcggccggct
      781 tcggtggtca aggagttgat ggaaaactac cttgacgccg gcgctaccga gatcttcgtt
      841 tggctcgaaa aaagcggcac cgcggcgatc cgcattaccg acaacggcga gggcatgacg
      901 ccggaggatt tggcgcttgc ggtcgagcgc catgccacca gcaaactcaa agaggacgac
      961 gatttgtttc gcatcgcgac gctgggtttc cgcggcgagg cgctgccgag catcggctcc
     1021 atcgctaaaa tggacatttc gtcgcggccg gtcttcagcg tcagcggcgc caagctgtcg
     1081 gtcgacggcg gcaagaaggg tgaagtgcat gccgccgctg cggcgctggg cacgaccatt
     1141 gagattcgcg acatatttta caatacgccg gcgcggcgca agtttctcaa ggcgccggcg
     1201 accgagctga gccatgtctg cgatgtggtc aatcgcctgg cgctggccaa cccgcaggtg
     1261 cattttcgcc tgcagcatga cggtcgcacc gtggcggatt atgtcgcggt caagcaggag
     1321 cgggatcgtc tgcagcaggt gttggggatc gaagtggcga agagtttgaa gcctttctct
     1381 tttactcagg gtgagatgac cgttagcggc ttcttgagca cggcgccgac ttcttatccc
     1441 aacgcgcgtt atttattcac cttcgtcaac cgccgctacg tgcgcgacaa ggtgctcacc
     1501 catgcggtgc tgcaggggta cgatactttg ctgatgaagg ggcaatatcc ggcggtggtg
     1561 ttgtttctag aaattcccta cgccgaggtg gatgtcaacg tgcatcccgc caaatacgag
     1621 gtgcgcttcc gccggcaaag cgatgt
//
LOCUS       DATIRS010000360         2744 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_814846, whole genome shotgun sequence.
ACCESSION   DATIRS010000360 DATIRS010000000
VERSION     DATIRS010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2744
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_814846"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..493)
                     /locus_tag="VLM90_04490"
     CDS             complement(<1..493)
                     /locus_tag="VLM90_04490"
                     /inference="COORDINATES: protein motif:HMM:NF023222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HSQ12248.1"
                     /translation="MTRSGDDYMRALRDGRTVLVNGERVADVTAHPAFAGAIRTVARL
                     YDLADDPVNRALMTYPSPRDGRPVNMAWLVPRTREDLAARRRAIKFWADASYGFLGRS
                     PDHVSSFFAGFGGSPRFYARGGQRFADNLLRFAAKAADEDLYLSYVIVHPTIDRAKPA
                     HQQS"
     gene            complement(547..1692)
                     /locus_tag="VLM90_04495"
     CDS             complement(547..1692)
                     /locus_tag="VLM90_04495"
                     /inference="COORDINATES: protein motif:HMM:NF013755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HRDC domain-containing protein"
                     /protein_id="HSQ12249.1"
                     /translation="MNTSATEGFVYVRDGAVLATLIDRMDSAARIAVDTEADSLHNYF
                     EKVCLIQLSIAGEHYLVDPLAGVELRGFLEALAAKPLIFHAGDYDLRILRASTGFRPS
                     GDIFDTMIAAQLLGIEQIGLAALLERCFAVTIGKEGQKSDWSQRPLSEKQLHYAVNDT
                     RYLEALAERMASELDAKGRLGWHSESCQAMVQASGRDNLRDPEEAWRLKGAGRMTRRQ
                     LAYLREFWRWRDQHAQRANRPPFKIFGNQQIFELVQWAESHPNEPLDKGPKLPRNIHG
                     SLLTTLVEAIARAAALSPADWPELKKHERGEAPSAESVARANALHSACTEIAKELEIS
                     PAVLAPRAALEAVARSRPRGVDEIMERGGLLRWQAELIRAAVENYAG"
     gene            1879..2445
                     /locus_tag="VLM90_04500"
     CDS             1879..2445
                     /locus_tag="VLM90_04500"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010957027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004602 - glutathione peroxidase activity
                     [Evidence IEA];
                     GO_function: GO:0043295 - glutathione binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HSQ12250.1"
                     /translation="MPARSIFVGVFATLMAFAFAAPSPAAEPPCPPILDHKFANLMDE
                     PISLCQFRGKVALIVNTASECGYTPQYDGLEKLYRRYSDKGFVVLGFPANDFGAQEPG
                     SNKQIAQFCQVNYGITFPVFAKTAVVGANANRLFRQLATRTGQPPKWNFHKYLIDKTG
                     QQITAFASAVEPEDRRLIAQIEKLLAAR"
BASE COUNT          575 a          877 c          772 g          520 t
ORIGIN      
        1 cgctttgctg gtgcgccggc ttggcgcgat cgatggtcgg atggacgatg acatagctca
       61 gataaagatc ttcgtccgcc gccttggcgg caaagcgcaa aagattgtcg gcaaaccgtt
      121 ggccgccacg cgcatagaat cgcggcgagc cgccgaagcc ggcaaaaaac gacgagacgt
      181 gatccggcga gcggccgaga aacccgtaac tggcatccgc ccagaacttg atcgcgcggc
      241 ggcgcgccgc cagatcttcg cgcgttcgcg gcaccaacca tgccatattg accggtcggc
      301 cgtcgcgcgg cgacggatag gtcatcagcg cgcgattgac cggatcgtcg gccaagtcgt
      361 acagccgcgc caccgtgcgg atcgcgccgg caaaagccgg atgcgccgtc acatccgcca
      421 cgcgctcgcc gttcaccaac actgtccggc catcgcgcag agcgcgcatg taatcgtcac
      481 cacttcgagt catgcttgtc ccccgaaccg cagtgatttt acagtacaga actgttcaag
      541 ccactctcat cccgcgtaat tttccaccgc ggcgcgaatc agctcggctt gccagcgcaa
      601 cagcccgccg cgttccatga tctcatcgac accacgcggc cggctgcgcg cgaccgcttc
      661 aagcgcggcg cgtggcgcca gaaccgctgg cgagatctcc agctccttgg caatctcagt
      721 gcaggcgctg tgcaacgcgt tggcccgtgc caccgactcg gcgctgggcg cttcaccgcg
      781 ctcatgcttt ttcagttccg gccaatccgc cggagacagg gccgccgccc tggcgatggc
      841 ttcaaccaga gtcgtcagca atgagccgtg aatattgcgc ggcaacttgg ggcccttgtc
      901 gagcggctcg ttgggatgcg actccgccca ttgcacgagt tcgaatattt gttgattacc
      961 aaaaatttta aatggcggcc gattggcacg ctgggcgtgc tggtcgcgcc agcgccagaa
     1021 ctcgcgcagg taggccaatt gccgccgggt catccgcccc gcgcccttga gacgccaagc
     1081 ctcttcggga tcgcgcaagt tatcgcggcc gctcgcctgc accatcgcct ggcagctttc
     1141 gctatgccag ccaaggcgtc ccttggcatc cagctcactt gccatgcgct cggccagcgc
     1201 ttcgagataa cgcgtgtcgt tgactgcgta atgcaattgc ttttcgctca acggccgttg
     1261 cgaccagtcg gatttctgac cttccttgcc gatggtgacg gcaaaacagc gttcgagcag
     1321 cgccgccaga ccgatctgct cgatgccaag caattgcgcc gcgatcatgg tgtcgaagat
     1381 gtcaccgctc gggcggaagc cggtggaggc ccgcagtatg cgcagatcgt agtcgccggc
     1441 gtggaagatc aacggcttgg ccgccaaggc ttcgagaaag ccgcgcagtt ccacacccgc
     1501 cagcggatcg accaagtaat gctcaccagc gatcgagagt tggatcaaac agactttttc
     1561 gaaatagttg tgcaaactat cggcttcggt atccacggca attcttgcag cgctgtccat
     1621 gcgatcgatc agcgtcgcta ggactgcgcc atctcggacg taaacaaaac cttcagtcgc
     1681 agatgtattc aaagaatctc ctcgatgcgg gaattgccag gtcgtgagct cccggacttc
     1741 cagacctaac catttctcgg cgccaatgga aagatcgata ttcgagcgcc aggtttattc
     1801 cgcggcgatt acttggcagg cggcgcagga acatgtaggt tcaacgggag atcagaattt
     1861 taaacatgga gaaaatgtat gcccgcccga tcgatcttcg taggtgtctt cgccacgctc
     1921 atggcttttg cgtttgccgc accgagcccc gccgccgaac cgccatgccc gcctatcctc
     1981 gatcacaaat tcgccaactt gatggatgaa ccgatctcac tgtgccaatt ccgcggcaaa
     2041 gtcgcgctga tcgtcaatac cgccagcgag tgcggctaca cgccgcaata cgacggcctg
     2101 gaaaaactct atcgccgcta cagcgacaag ggtttcgtcg tgctcggctt tccggccaac
     2161 gatttcggcg cccaggagcc gggatcaaat aaacaaatcg cgcagttttg ccaggtgaat
     2221 tacggcatca cctttccggt attcgccaag accgcggtgg ttggcgccaa tgccaaccgg
     2281 ctatttcgcc agctagcgac gcgcaccgga cagccgccca agtggaattt tcacaaatat
     2341 ctcattgata aaaccggcca gcagatcacc gccttcgcaa gcgccgttga acccgaagac
     2401 cgccggctga ttgcacagat cgaaaaactg ctggctgcac ggtgagccca gcgcgcctgc
     2461 cggacggagt ctatcctgag cagcccgtcg cagggccggc atgacggaac tttacctcgg
     2521 ttgatcgcga ggggtttcac ccgttgctga gatatactga atctatccca gcgccgttca
     2581 cacgacaccc gcgatcccta gcaacgcgcc agcagctaat aaccacagcg gatttcaggt
     2641 caggcgcaac acaacagcgg cggtgagtag ggtcgtcaag taaccgcgcc aatcatggtt
     2701 cacggcgcgc atgagcacgg ttgcgccggc gaacatcaaa ccga
//
LOCUS       DATIRS010000361         1813 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_126218, whole genome shotgun sequence.
ACCESSION   DATIRS010000361 DATIRS010000000
VERSION     DATIRS010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1813
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126218"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(152..424)
                     /locus_tag="VLM90_04505"
     CDS             complement(152..424)
                     /locus_tag="VLM90_04505"
                     /inference="COORDINATES: protein motif:HMM:NF013346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM165/GDT1 family protein"
                     /protein_id="HSQ12251.1"
                     /translation="MDFKTLTTVFTSVFIAELGDKTQLATMLFASDKETSKLTVFLGA
                     AAALVVTSAIGVAAGSVVSNYVSEKTLQYIAGIGFIGIGIWTLVKA"
     gene            complement(443..1294)
                     /locus_tag="VLM90_04510"
     CDS             complement(443..1294)
                     /locus_tag="VLM90_04510"
                     /inference="COORDINATES: protein motif:HMM:NF014899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12252.1"
                     /translation="MAQIVSIIGITHNPFMPRLFKQPQQPPGAAKVKERIAMMRQKLA
                     EAKVDVLVCIGNDHLHQFFMDNMLAFMIGKMEQYDGTFYDEEREFGLPKCKLQGDLDV
                     SDAIMEGAFDRGVDFSYSNELTIDHSIIVPMMFVRPEMDIPIVPILTNCIAPPMPRAK
                     RYFEVGKALRAAIDSLPTNKRIGVLVSGHLSLEIGGPKMFEPKLTDPNFDANAVGWIV
                     NGNIDAAAEACAPDKVIQYGNMTTGYLNFIMMMGLANSTKPSYAEGLDAGFPAIPFFS
                     WDQQPKV"
     gene            complement(1514..>1813)
                     /locus_tag="VLM90_04515"
     CDS             complement(1514..>1813)
                     /locus_tag="VLM90_04515"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HSQ12253.1"
                     /translation="LWPGAFNSLAIGGRMVTAGAHGGGNVMLDAKRLYQRRISILGAA
                     GTNPPDVENALEAARAGKIRAIPHRKMALSQAAEAHRIVENNQIIGKIILEPGNN"
BASE COUNT          357 a          469 c          562 g          425 t
ORIGIN      
        1 aatggaatgc gcgggatcgt taaaggtcgc cgacagggga tcataaaaga ccatcactgc
       61 ctcgtcgaag gatattttgt gtttccggta attgttggct gccttcttgc ggtcccattc
      121 gaactgcaca atcgcttccg acgccgagtg gttacgcttt caccaatgtc cagatgccga
      181 tgccgataaa gccgattccc gcgatatact gcagagtctt ttcgctgacg taattcgaga
      241 caaccgagcc cgccgcgacg ccgatggcgg aggtgacgac aagggcagcg gcggcgccga
      301 gaaagacggt cagtttgctg gtttctttat ccgacgcgaa cagcatggtc gccagttggg
      361 tcttgtcgcc gagttcggcg atgaagacgg aggtgaatac ggtggtgaga gttttaaaat
      421 ccattggcag ttctttcggt gcttaaacct tgggctgttg atcccaactg aaaaatggaa
      481 tcgccgggaa gccagcatct aaaccttcgg cgtaggacgg tttggttgag ttggcgaggc
      541 ccatcatcat gatgaagttc aaatagccgg tggtcatgtt gccgtattga atgactttgt
      601 cgggggcgca ggcttcggcc gcggcgtcga tgttaccgtt gacgatccag ccgaccgcgt
      661 tggcgtcgaa gttgggatcg gtcagcttgg gctcgaacat tttcgggccg ccgatttcca
      721 acgacagatg gccgctaacc agcacgccga tgcgcttgtt ggtgggcagg ctgtcgatgg
      781 cggcgcgcag cgctttgccg acctcgaagt agcgttttgc tcgtggcatc ggcggggcga
      841 tgcagttggt caagatcggc acgatgggga tatccatctc gggtcggacg aacatcatcg
      901 gcacgatgat cgagtggtcg atggttagtt cattcgaata ggaaaaatcg acgccacggt
      961 cgaaggcgcc ctccatgatg gcgtcagaga cgtcgaggtc gccctgaagc ttgcactttg
     1021 gcaagccgaa ctcgcgctcc tcgtcgtaaa acgtgccgtc gtactgttcc atcttgccga
     1081 tcatgaacgc cagcatgttg tccatgaaaa attgatgcag atgatcgttg ccgatgcaca
     1141 cgagcacgtc gactttggcc tcggcaagct tctggcgcat catggcgatg cgttctttga
     1201 ctttggcggc gccgggcggc tgctgcggct gtttgaacag gcgcggcatg aacggattgt
     1261 gcgtgatacc gatgatcgaa acgatctggg ccatggtttc ctcgtacggt tactttactt
     1321 ggtgtttagc atgttgactt gcgtgctgta aacgcagtgg gggattcgga tttatctccc
     1381 gcaaaggcgc aaaggtgacg ggccgatgcc cgtcatcccg aacgaacgtg agggatccag
     1441 gaaagatttc tcccttcggt cgaaatgaca acgattccga actcggcgtc tttgcgcctt
     1501 ggcgggagca atcctaatta ttccccggtt ccagaattat cttgccgatg atctgattgt
     1561 tctcgacaat gcggtgcgct tcggcggctt ggcttaaagc cattttgcgg tggggaatcg
     1621 ctctgatctt tccggcgcga gcggcttcta aggcattctc cacgtccggc ggattggtgc
     1681 cggcggcgcc gaggatgctg atgcggcgct ggtacaagcg cttggcgtcc aacatcacgt
     1741 tgccgccgcc gtgggcgccg gcggtgacca tgcggccgcc gatggcgagg ctattgaacg
     1801 cgccaggcca caa
//
LOCUS       DATIRS010000362         2123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_323459, whole genome shotgun sequence.
ACCESSION   DATIRS010000362 DATIRS010000000
VERSION     DATIRS010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2123
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_323459"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            230..1174
                     /locus_tag="VLM90_04520"
     CDS             230..1174
                     /locus_tag="VLM90_04520"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HSQ12254.1"
                     /translation="MKFVVFGPEKRVGALAGDRVIDLNRASAQLPARLLNFIEAGKPA
                     LDSAADAIEKFAKAPTGDGIVHTLSSVDLHATWPERRIACVGGNYAKHLLGMWANRLG
                     KTDITVEEVAVEAKKAGHWGFWKVPAEVAGPGGTIPFPKRVTYFDYEGEVAIIVGKRG
                     KNIPANKVNDYVWGVTLFHDWSIRDGGGTDRAVSYNLQKNFDGAASMGPCIVVGETGQ
                     QEVDVETRVNGVVRQSYSTSEMIWDFGEVLEYLSQDFTFVPGDVIAGGTSAGTAADKS
                     RRSPDGKRPLDLFLKVGDLVEVSSSKIGALSNKIVASD"
     gene            1330..>2123
                     /locus_tag="VLM90_04525"
     CDS             1330..>2123
                     /locus_tag="VLM90_04525"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSQ12255.1"
                     /translation="MDFNLSEEIQILRDTVRRFVDKELIPLEREYRHDSEGPMPDHLL
                     KPLQEKTKAMGLWMLDVPAEYGGADLGLLPRCIIHEEIARAASLPFRSLELFGPEVRP
                     VLFYCSDEQKERFLKPVLRGEMKFCFAQTEPDAGSDPANMRTRAVRDGDDFIINGTKR
                     FITAAGRADYVQLMAVTDPEKKARGGISCFAVDLKSPGVNLERQWPAMMGEAPWQLYF
                     ENVRVPANNVIGEIGGGFSIAQKWIGEGRIRGHGARPVGIASRALD"
BASE COUNT          474 a          636 c          618 g          395 t
ORIGIN      
        1 cgacctcccg agactgttca gactcatcga gcgatttcgc taagcagggc gacagtagca
       61 aaaagcgcgc tattcgacca cagcaaatcg atgctattcc ccaggtttcc ctcccgaaaa
      121 aatggcccaa tggacgcccc atccgggccg gaaaatcgat gaaggccttg accaaaagct
      181 ctttgcgatg ctacgccaat gcacacgcag gcagcatgga ggtggacaaa tgaaattcgt
      241 cgtctttggt ccggagaaac gcgtcggcgc gttggccggc gatcgcgtca tcgatctcaa
      301 ccgtgcatcg gcgcagctac cggcacgctt gttaaacttc atcgaagccg gcaaacccgc
      361 tctcgatagc gctgctgacg ctatcgagaa atttgctaaa gcaccgaccg gcgacggcat
      421 tgtccatacc ctgagtagcg tagatctcca cgctacctgg ccggaacggc gtatagcctg
      481 cgtcggcggc aactacgcca agcatctgct cggcatgtgg gcgaaccgct tgggcaaaac
      541 cgatatcacc gtcgaggaag ttgccgtgga agccaagaaa gccggtcatt ggggattttg
      601 gaaagtgccc gccgaagtcg ccgggcctgg gggaacgatt ccatttccca aacgggtcac
      661 ctacttcgat tacgaaggcg aagtcgcgat catcgtcggc aaacgcggca aaaatattcc
      721 ggctaataaa gtgaacgact atgtctgggg agtcacgttg ttccacgact ggtcgatccg
      781 tgacggcggc ggcaccgacc gcgccgtcag ctacaacttg caaaagaatt tcgacggcgc
      841 cgcgtccatg ggaccctgca tcgtcgtcgg cgaaaccggc caacaagagg tcgacgttga
      901 gacgcgcgtc aatggtgtgg tgcgccagag ctatagcacc agtgagatga tttgggactt
      961 cggcgaagtg ttggaatact tgtcgcaaga ctttaccttc gtgcccggcg atgtcatcgc
     1021 cggcggcact tcggcgggga ccgcggcgga taaatctcgc cgcagcccgg acggcaaacg
     1081 gcccctcgat ctatttctga aggtcggcga cctcgtcgaa gtgtcgtcct cgaaaattgg
     1141 cgcgctgtcg aacaagatcg tcgccagcga ctagccgtgt ttcgtctccg tcattcccgc
     1201 acacgcggga atccaggctt ctctgtgcgc gatagagaat gaacctggat gccggcctgc
     1261 gccggcatga cggtctgaag aaagcgcatt caaagtaccc ctgaacgaaa tattaacgga
     1321 gaccatgcca tggacttcaa tctctccgaa gaaattcaaa tcctgcgcga taccgtgcgc
     1381 cgcttcgtcg acaaagagct gatcccgctg gagcgcgagt accgccacga cagcgagggg
     1441 ccgatgcccg atcatctgct caaaccgctg caagaaaaaa ccaaagccat gggcttatgg
     1501 atgctcgacg ttccggccga gtatggaggt gcggacctcg gccttctgcc gcgctgcatc
     1561 attcacgaag aaatcgcccg cgccgcgtct ctcccctttc gcagtctcga gctgttcggg
     1621 ccggaagtgc ggccggtgct gttttattgc agcgatgagc agaaggaacg gtttctcaaa
     1681 ccggtgctgc gcggtgagat gaagttctgc ttcgcccaga ccgaaccgga cgccggcagc
     1741 gacccggcca acatgcgcac ccgcgccgtg cgcgacggcg atgactttat catcaacggc
     1801 accaagcgct tcatcaccgc ggctggccgc gctgactacg tccaactaat ggcggtaacc
     1861 gacccggaaa agaaagcgcg cggcggcatc agttgttttg ccgtggattt gaagagcccc
     1921 ggcgtcaatc ttgagcgcca atggccggca atgatgggcg aagcgccctg gcaattgtat
     1981 ttcgaaaacg tccgcgtccc ggcgaacaat gtcatcggcg aaatcggcgg cggcttctcc
     2041 atcgcgcaaa aatggatcgg cgaaggacgc atccgcggcc atggcgcgcg accggtgggt
     2101 atcgcctcgc gcgccctcga cat
//
LOCUS       DATIRS010000363         1781 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_618749, whole genome shotgun sequence.
ACCESSION   DATIRS010000363 DATIRS010000000
VERSION     DATIRS010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1781
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_618749"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..414)
                     /locus_tag="VLM90_04530"
     CDS             complement(<1..414)
                     /locus_tag="VLM90_04530"
                     /inference="COORDINATES: protein motif:HMM:NF015863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-associated TM helix domain-containing
                     protein"
                     /protein_id="HSQ12256.1"
                     /translation="MKLLHKIIFWSHLLAGVIGGTVIFIMSATGVILMYEYQLVEYAE
                     RDVRLVMPPDANAQRISLDELVAKARAQNPKAQPTGVVLRNEPTASVAVGFGREGATY
                     VNPYTGVILGSESKLHDWFHDVVDWHRWLGTEGEGR"
     gene            complement(431..943)
                     /locus_tag="VLM90_04535"
     CDS             complement(431..943)
                     /locus_tag="VLM90_04535"
                     /inference="COORDINATES: protein motif:HMM:NF022893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3016 domain-containing protein"
                     /protein_id="HSQ12257.1"
                     /translation="MISAIALVLVAGCAAAAPVDESAARISVAFIEPEKFTDARRAEL
                     EPTLTGIVGELQKFIITTGARYIPENMKLNIRITDIDLAGDFELFRGPQADQVRIVKG
                     LYPPHIVLEFEIMDSAATVVKSGKRDLTDINYQLRSVYPREDYLRYEKDILRDWLRAE
                     LGVVKAAKTN"
     gene            complement(963..1586)
                     /locus_tag="VLM90_04540"
     CDS             complement(963..1586)
                     /locus_tag="VLM90_04540"
                     /inference="COORDINATES: protein motif:HMM:NF003975.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016706 - 2-oxoglutarate-dependent
                     dioxygenase activity [Evidence IEA];
                     GO_function: GO:0031418 - L-ascorbic acid binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe2+-dependent dioxygenase"
                     /protein_id="HSQ12258.1"
                     /translation="MMNRASWIDGKVTAGYQSAQVKDNRQLPENSPEARELGDMIVAA
                     LERNPLFITATLPLRVFPPLFNRYEGGESFGAHLDNSIRQIPGTPLRVRTDISATLFV
                     SAPEDYDGGELVIDDVYGAHAVKLDAGDMAVYPASSLHHVNPVTRGVRLASFFWVQSM
                     VRDDGNRTLLFDLDMAINKVNQALPNHGAVVELTNCYHNLLRRFAEV"
BASE COUNT          345 a          518 c          547 g          371 t
ORIGIN      
        1 acggccttcg ccctccgtgc cgagccagcg gtgccaatcg acgacgtcgt gaaaccagtc
       61 gtgcagtttc gattccgagc cgaggatcac cccggtatat ggattcacgt aggttgcgcc
      121 ttcacgaccg aagccgacgg cgacggatgc ggtcggttcg ttgcgcagga ccacgcctgt
      181 gggctgggct ttgggattct gcgctcgcgc cttggctacc agttcatcca ggcttatgcg
      241 ctgcgcattg gcatccggcg gcatgaccaa gcgaacgtct cgttcggcgt attcgaccag
      301 ttggtactcg tacatcagga tgacgccggt cgccgacatg atgaagatga cggtgccgcc
      361 gataacgccg gcgagcaggt gggaccaaaa aatgatttta tgcagcagct tcatgccgtc
      421 tcctcgggcg ctagttggtc ttggcggcct tcacaacacc aagctcggcg cgcagccagt
      481 cgcgtaagat atccttttcg tagcgtagat agtcttcccg cgggtaaacg ctgcggagtt
      541 ggtaattgat atcggtcaag tcgcgtttgc cggatttgac caccgtcgcg gcgctatcca
      601 tgatctcgaa ctcaagcacg atgtggggcg ggtagagacc tttgacaatg cgcacttggt
      661 ccgcttgcgg gccgcgaaac aattcgaagt cgccggcgag gtcgatgtca gtgatccgga
      721 tattcagttt catattctca gggatgtagc gcgcgccggt cgtgatgatg aacttttgca
      781 gttcgccgac gatgcccgtc aatgtcggct ccagctcggc gcggcgcgcg tcggtgaatt
      841 tctccggttc gatgaaggcg acggaaatcc gcgcggcgga ttcatccacc ggcgcggccg
      901 cggcgcagcc ggcaaccagc acgagggcga tggccgagat cattcttgat cgcctattca
      961 tgtcacacct ccgcgaagcg gcgcagcaaa ttgtgataac aattggtcag ctccaccacg
     1021 gcgccgtgat taggcagagc ttgatttact ttgttgattg ccatgtcgag atcgaagagc
     1081 agggtgcgat tgccgtcgtc gcgtaccatg ctttgcaccc aaaaaaagga tgccaggcgg
     1141 acgccgcgtg tcactggatt gacgtggtgc aggctgcttg ccggatagac ggccatgtcg
     1201 ccggcgtcga gctttaccgc gtgcgcgccg taaacgtcgt cgatcaccag ctcgccgccg
     1261 tcgtagtctt ccggcgcgct cacaaacaac gtcgcggaaa tgtccgtgcg cacgcgcagc
     1321 ggcgtgccgg gaatctgccg gatggaattg tcgagatgcg cgccgaagga ctcgccgcct
     1381 tcgtagcggt tgaacagcgg cgggaagacc cggagcggca acgtcgccgt gatgaacagc
     1441 gggttgcgct ccagggccgc cacgatcatg tcgcctagct cccgcgcctc cggactattt
     1501 tccggtaatt gacggttatc cttcacctgg gccgattgat acccggcggt cacctttccg
     1561 tcgatccagc tcgcgcggtt catcacttcg cggcagcgcg cgtttcaagt tctaaggagt
     1621 ttgagaaaaa atgatcgttc atgttcccaa tgtcctgaac cccgaacagg tcgcgcgctg
     1681 ccgcgaagtg atgaaccgcg cgagctggat cgacggcaag gtgaccgccg ggtatcaatc
     1741 ggcccaggtg aaggataacc gtcaattacc ggaaaatagt c
//
LOCUS       DATIRS010000364         2342 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_618767, whole genome shotgun sequence.
ACCESSION   DATIRS010000364 DATIRS010000000
VERSION     DATIRS010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2342)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2342
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_618767"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1059
                     /locus_tag="VLM90_04545"
     CDS             <1..1059
                     /locus_tag="VLM90_04545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12259.1"
                     /translation="AGQAELRTQVTNAFASLAKLDSASSAFYEKRRGYFTALELKGAA
                     TSRKGPQRDRSQVEQLAMEAAERGDAAALQRLAKELQDWKESGAAAASANAPMQFSRY
                     ECPVDLAAPFPPQVIERARELGLIEVRSAPVDELKTVREVIYSHADQPVPSNPEMEKE
                     GVLRARAQAELELPAELNSEEPQTLTGQFIQQIFVNSGGARYLPPLSAETVLLEDFAE
                     NESADAPSKLLSALGLLKRSGLARAAIESVLMRSGTEILENQLELDPLEFRLVCIPYD
                     LYARFGRDRGLGKWSHWTHFDGYQVMAGNRLRALVGGDGRFGGVFDLVSISPSDAREG
                     VYARFAVVRRARQTLRWR"
     gene            1220..1999
                     /locus_tag="VLM90_04550"
     CDS             1220..1999
                     /locus_tag="VLM90_04550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12260.1"
                     /translation="MNHTTLVLLVTVGLFLGMLLLMEIGRRTGIQRIKEDSGSGAPGI
                     GAIDGAVFAVLGLLMAFTFAGATARFDTRRQLIVEETNDIGTAYLRIDLLAADAQPVL
                     RESFSQYLDARIEVYRKLPDIDAAKAFLEKANQLQKQIWRQAVGASRAQGASPAAPML
                     LLPALNAMFDITTTRTVATLTHPPTIVFVMLFGLALVASLLAGHGMTASRVRSWFHMV
                     GFALVVAAVVYVILDIEYPRLGLIRIDAFDQTLIDLRNSMN"
BASE COUNT          488 a          661 c          714 g          479 t
ORIGIN      
        1 gcaggccaag cggaacttcg cactcaggtg actaacgcct ttgcgtcgct ggcgaaactg
       61 gacagcgctt ccagcgcatt ctatgaaaag cggcgcggct attttaccgc gctggaactg
      121 aaaggcgcag ccacttcgcg aaagggtccg cagcgcgacc ggtcacaagt cgagcagttg
      181 gccatggaag ccgcagaacg cggcgacgcc gccgcgctgc agcggttggc gaaagagctg
      241 caggactgga aggaaagcgg cgctgcggca gcctcggcaa acgccccgat gcaattcagc
      301 cgttatgaat gccccgtcga tctcgcagcg ccgtttccgc cgcaggtgat cgagcgcgcc
      361 cgcgagctcg ggctgattga agtgcgcagc gctcctgtcg acgaattaaa aaccgtgcgt
      421 gaagtcatct actcgcatgc cgaccagccg gtgccatcca acccggaaat ggaaaaagag
      481 ggcgtgctgc gcgcccgggc gcaggcggag cttgagcttc ccgccgaact caacagcgaa
      541 gaaccgcaaa ccctcaccgg acagtttatt cagcagatct ttgtcaactc cggcggagcg
      601 cgttacctgc ctcctctatc cgcggaaacg gtgctgctgg aagattttgc cgaaaacgag
      661 tcggctgacg cgccgtcaaa gctgctgtct gccttggggt tgcttaaacg gagcggcctc
      721 gccagggcgg caatcgaaag cgtgctcatg cgttccggca cagagatcct ggagaatcaa
      781 ttggagctgg accctctgga gtttcgcctg gtctgcattc cgtacgatct gtacgcgcgc
      841 tttggccgcg accggggctt gggaaaatgg tcgcactgga cgcatttcga cggctatcag
      901 gtcatggctg gcaaccgctt gcgtgcgttg gtgggcggcg atggccgatt cggcggagtc
      961 ttcgatctgg tgagcatcag cccgagcgat gcgcgcgagg gcgtctatgc gcgtttcgca
     1021 gtcgtgcggc gcgcccgcca gaccttgcgc tggcgctgat cggcgcgcca caactggcga
     1081 gaccggaatg ccggcatata ggcagatcgg cggctgcaat gactggaaat cgcaccggga
     1141 ttttagtatt ccaagattca attattttat ttcttttcac cggctatgat ggccgaaacc
     1201 caatccttcg gaatgcaaca tgaatcacac aactttagtg cttctggtta ccgtcggttt
     1261 gtttctgggc atgctgctgc tcatggaaat cggccgacgg accggtatcc aaaggatcaa
     1321 agaagactcc ggaagtggcg cgccgggcat aggtgcaatc gatggtgcgg tgttcgccgt
     1381 attaggactg ctcatggctt ttacctttgc cggcgcgacc gcgagatttg acacgcggcg
     1441 gcagttgatc gtcgaagaga ccaatgacat tggcaccgcc tacctgcgca tcgacttgct
     1501 ggcggccgat gcgcagccag tgttgcgcga aagttttagt caatacttgg acgcgcgcat
     1561 agaagtatat cggaaactgc cggacatcga cgcggcaaag gcgtttctag aaaaggccaa
     1621 ccagttgcag aagcagattt ggcgccaggc ggtcggcgcc agccgggcgc aaggcgcttc
     1681 gccggcggca ccgatgctgc tactgccagc actcaatgcg atgttcgata ttacgaccac
     1741 ccgaaccgtg gcgactctaa cgcatccgcc gacaatcgtt ttcgtgatgc ttttcggatt
     1801 ggcgctggtg gcttcgctgc tcgcgggcca cggcatgact gccagcaggg tgcgtagctg
     1861 gttccatatg gttgggtttg cgctggtcgt ggcggcggtg gtctacgtca tcctcgatat
     1921 cgagtatccg cgcttgggtt tgatccgcat cgacgccttc gatcaaacgt tgatagacct
     1981 gcgcaatagc atgaattgaa atcaccaccg tggctaagcc aaggcggcac aggagcggtg
     2041 ctcacgaggt caactcagcg gagcaataat ttgcgctgat gcggaattcg ctcgccgcag
     2101 ccgccgtggc gcgctgcgtg attgttatta cgcgcaggca ccacggtcac cggtgggggc
     2161 agcggcgcca cccattgagt tgatccgaca tctctatcgg tggtacttac gataacgcaa
     2221 atgcactgaa tcatcggtag atcatctcca aacggaacga cgttgtatgt tgtataagga
     2281 atacccccgg gagcgtaacg tcaactgcac tgaacactaa ttaagactgc ccatgagttt
     2341 at
//
LOCUS       DATIRS010000365         4023 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1208714, whole genome shotgun sequence.
ACCESSION   DATIRS010000365 DATIRS010000000
VERSION     DATIRS010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4023
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1208714"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(33..527)
                     /locus_tag="VLM90_04555"
     CDS             complement(33..527)
                     /locus_tag="VLM90_04555"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSQ12261.1"
                     /translation="MGTIAGAQNILAGLKGAGIDLVASVPDINMLQLLNLLYEDKEIA
                     HVPVGREEEGIGVCTGAHLAGKFPAMLMQNGGLLNSANGLTTTALQFGIPVVLLIYYA
                     GDIGDNAFHMVGLVTEPVLQGLGIKYIVMRDPAKVEQEIAGAVTLANSTKRPVALLLT
                     RAVL"
     gene            691..1650
                     /locus_tag="VLM90_04560"
     CDS             691..1650
                     /locus_tag="VLM90_04560"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSQ12262.1"
                     /translation="MIKLELKMIALAAVMFAVPAAQAQYPTKTIQIINPFPPGAVTDI
                     VARILAPKMSAALGQQVVIVNKAGGGGAVGIQAAKDAAPDGYTILVTPPPIALIPIVN
                     KNSGFTLKDFTPLALATSSPNTTVVKADAPWKSFEEFIADAKKNPGQLTYGSAGPGTT
                     PHFIGELVKLKTGIDMTHVPLGSESAAATAVLGGHVNVGFLTLGTTRGHVEAGTLRAL
                     AVASNRRLKDFPNIPTTVEKGHPELNLKVWVGFFAPAKTPPAAVKRLAAAISDSLKDA
                     EASSNIEKAQALIENLGPAEFAKFLAEEERKWGEVARAAKISQ"
     gene            1915..2370
                     /locus_tag="VLM90_04565"
     CDS             1915..2370
                     /locus_tag="VLM90_04565"
                     /inference="COORDINATES: protein motif:HMM:NF018979.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HSQ12263.1"
                     /translation="MKRFEITAAAALAVLAAYVLFESTKLRIVSFRVPQTGFYPRVLG
                     YLLVLLTLIELLRTLRQRYSAIAPGKIAGEGWFRIGVILASMIGFALVLERLGFLLAT
                     FILMVLLLRAIEAPRWPKVLIVALVTSLLSYGLFAWLLGVPLPGGILGI"
     gene            2372..3853
                     /locus_tag="VLM90_04570"
     CDS             2372..3853
                     /locus_tag="VLM90_04570"
                     /inference="COORDINATES: protein motif:HMM:NF014073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HSQ12264.1"
                     /translation="MELLHNFALGLSVALTPMNLLFCFLGALVGTLVGVLPGLGPVGA
                     VAFLLSITFKMEPASAIIMLAGIYYGAMYGGSTTSILVNIPGETASVVTCLDGYKMAR
                     QGRAGAALGISAFGSFIAGTVGVVGLMFLAPLLGRAALSFGPPEYFALTLTGLTLVAY
                     LSQGSMLKALIMATLGLLAGTVGMDPISGEERFTYGTLTLRDGFGLVPVAMGLFGIAE
                     VLENLVVLGKQSVYETKIQGLLPNRQDWRDSAAPIARGSALGFFLGILPGPGPVIASF
                     VSYAMEKRLSRYPEKFGTGVIEGVAGPEAANNAATAASFIPLLSLGIPTSAIMALFMG
                     ALMIHGIQPGPLFIAKYPELFWGFIASMYVGNAMLLVLNLPLIGIWVRLLKTPYAILF
                     PLILLFCLIGVYSLNANVAEIVIMLAFGVAGFVLRRVGFEGAPFILAMVLGPIMETSL
                     RQTLLISRGSFYIFLTRPICAVLIGLTVAFLIWTIFKRKRKNA"
BASE COUNT          761 a         1174 c         1190 g          898 t
ORIGIN      
        1 aggccttcaa agcgtttcat ggtggacctc gcttaaagca cggcgcgggt taacagtagc
       61 gccaccggcc gtttggtaga attcgccaag gtgaccgccc cggcgatctc ttgctccact
      121 ttggccgggt cgcgcatgac aatatatttg atgccgagtc cctggagcac gggctcggtg
      181 accaaaccga ccatgtggaa agcgttgtcg ccgatatcgc cggcgtagta gatcaacagc
      241 acaaccggaa tgccgaattg cagcgcggtc gtggtcagtc cgttggcgct gttgagcagg
      301 ccgccgttct gcatcagcat ggcgggaaat ttgccggcga gatgggcgcc ggtgcagaca
      361 ccgatgcctt cttcctcgcg tcccaccggc acatgggcga tctctttatc ttcgtagagc
      421 agattgagca gctggagcat gttgatgtcc ggcacgctcg cgaccagatc gatgcccgcg
      481 cccttgaggc cggctaagat attctgcgct ccagcgatgg ttcccatatg cgattaacct
      541 ctggtcggtt ctaggcaacc ccaccgatac tgtcaaggtt tgccaagaca tttgccgcga
      601 cgaagattga cacttccccg gcgattctgt tagcagggaa tgcggctcag aagcaaacaa
      661 gcaaacaaag gtctaccaag gagaggcatc gtgataaagc ttgaattgaa aatgatcgcc
      721 ttggcggcgg ttatgttcgc tgtgccggcg gcacaggcgc agtatccaac caagacgatt
      781 cagatcatca atccgtttcc tcccggtgcg gtgaccgata tcgtcgcgcg tattctcgcg
      841 ccgaagatgt cggcggcgtt ggggcagcag gtggtgatcg tcaataaagc cggcggtggt
      901 ggcgcggtgg gcattcaagc tgcgaaggat gcggcgccgg atggctacac aatcctggtc
      961 acgccgccgc caatcgcgct aatcccgatc gtcaacaaga attccggctt taccttgaaa
     1021 gactttacgc cgctggcgct ggccaccagc agcccgaaca cgacggtggt caaagccgac
     1081 gcgccgtgga agagtttcga agagttcatc gccgatgcta agaaaaaccc cggacaactc
     1141 acctacggct cagccggtcc gggcacgacg ccgcatttca ttggcgaact ggtgaagctc
     1201 aagaccggca tcgacatgac ccatgtgccg ctcggttccg agtcggcggc ggccaccgcg
     1261 gtgttgggcg gtcatgtgaa cgtcggcttt ctcaccttgg gcacgacgcg cggccatgtc
     1321 gaagccggca cgctgcgcgc gttggcggtg gcgtccaatc gccgcctcaa agactttccc
     1381 aacatcccca ccaccgtcga gaagggccat ccggaactca atctaaaagt ttgggtgggc
     1441 ttcttcgcgc cggccaagac gccgccggcg gcggttaagc gactagccgc ggcgattagc
     1501 gatagcttga aagacgccga agccagctcc aacatcgaaa aagcccaagc tttgatcgaa
     1561 aacctcggcc ccgccgagtt cgccaagttc ctcgctgaag aagagcgcaa gtggggcgaa
     1621 gtggcgcgtg ccgcgaaaat ttcccaatag ttgtttcgag tcgatgcaca caggatcccg
     1681 gattccgccg ttgaaattga ggctgccagc gaggtgctct cctgccgtcg tgaagacaat
     1741 gatgcctaca tctaagtggt tggcgatcgt tggtgctgcg cgaaatcgct gcgaatccaa
     1801 cgcagcggct tggccaatgc gaattagacg aggtaattac acttccgggt gtctacacaa
     1861 ctgcaggttt gcatctcgct ggcgctttgc tggtgggcag ctgcagaatg caggatgaaa
     1921 cgattcgaga tcaccgccgc ggcagcgctc gccgttctgg ccgcctatgt cttgtttgag
     1981 tcgaccaagc ttcgtatcgt cagcttccgc gtgccccaga ctggctttta cccacgagtc
     2041 ctcggttacc ttttggtgct gctcacactg atcgagctgc tgcggacatt gcgacagcgc
     2101 tacagcgcaa tcgctccggg caaaatcgcc ggcgaaggtt ggttccgcat cggtgtaatc
     2161 ctggcgagca tgattggctt cgccctggtg ttggagcggt tgggcttctt gctcgcgact
     2221 tttattctca tggtgttgct cctgcgcgcc atcgaagcgc cgcgctggcc gaaggtgttg
     2281 attgttgccc tggtcacttc gctcctttct tacggcttat ttgcttggct cctgggcgtg
     2341 ccgctgcccg gcggaatttt aggaatctag cgtggagttg ctgcacaact tcgccctcgg
     2401 tttgtcggtg gctttgacgc cgatgaactt gctgttctgc ttcctcggcg ctttggtcgg
     2461 tactttggtt ggggtcttgc cgggacttgg gccggtgggc gcggtggcgt ttttgctgtc
     2521 gattaccttc aagatggagc ccgccagcgc gatcatcatg ctcgcgggaa tttattacgg
     2581 cgccatgtat ggcggttcga cgacctcgat cctggtcaac attcccggtg agaccgcgtc
     2641 ggtggtaacc tgtctcgatg gttataagat ggcgcgccag gggcgcgccg gcgcggcgtt
     2701 aggcatttcc gcctttggct cgttcatcgc cggcaccgtc ggcgtggttg gcctgatgtt
     2761 cctcgcgccg ctgctcggca gagcggcact cagcttcggc ccgccggaat attttgcttt
     2821 gaccctcacc ggactgacct tagtcgccta tttgtcccag ggttcgatgc tcaaagcgct
     2881 gatcatggcg acgctgggcc tgctcgccgg caccgtcggc atggacccga tctccggcga
     2941 ggagcgtttt acctacggta cgctgacgct gcgcgatggc tttggcctgg taccggtggc
     3001 gatgggattg tttggcatcg ccgaagtgtt ggagaatttg gtcgtcctgg gcaagcagtc
     3061 ggtctatgaa accaagatac aagggttgct gcccaatcgc caagattggc gcgatagcgc
     3121 ggcgccgatc gcccgcggct cggcgctcgg gttctttctc ggcattctcc cggggccagg
     3181 tccggtgatc gcgtcgttcg tttcctatgc catggaaaaa cgcttatcgc gctatccgga
     3241 aaagttcggc actggcgtca tcgaaggcgt ggccggtccg gaagcggcga acaacgccgc
     3301 caccgccgca tcgttcattc cactgctgtc gctcggcatc cccaccagcg cgatcatggc
     3361 gctgttcatg ggcgcgctaa tgatccacgg catccagccc ggcccgctgt tcatcgccaa
     3421 atatcccgaa ctgttttggg gtttcatcgc cagcatgtac gtcggcaacg ccatgctgct
     3481 ggttttaaac ttgccgctga tcggcatctg ggtgcggttg ttaaaaaccc cctacgcgat
     3541 tctcttcccg ttaatattac ttttctgctt gatcggcgtt tacagcctca acgccaacgt
     3601 cgccgagatc gtcatcatgc tcgcctttgg cgtcgccggc ttcgttctcc gccgcgtcgg
     3661 cttcgaaggc gcgccgttca tcctcgccat ggtgctcggg ccgatcatgg agacatcttt
     3721 gcgtcagacg ctgttaatct cgcgcggtag tttttacatt tttctgaccc ggccgatctg
     3781 cgccgtgctg attggactga cggtagcgtt tttgatttgg acgatattca agcggaagag
     3841 aaaaaacgca taaccacatg gggcctagcg cggcaccgct ggaaccgaag aagataaaag
     3901 atttagccgc aaagaactta gcgcagcaga gccgcaacca aatgggaaag agttttcacc
     3961 acgaagctcc tagcgcagcg aagccgcaac cgaaactcgg aatatctctc gccaagacgc
     4021 aaa
//
LOCUS       DATIRS010000366         1849 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1012250, whole genome shotgun sequence.
ACCESSION   DATIRS010000366 DATIRS010000000
VERSION     DATIRS010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1849)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1849)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1849
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1012250"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..694)
                     /locus_tag="VLM90_04575"
     CDS             complement(<1..694)
                     /locus_tag="VLM90_04575"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12265.1"
                     /translation="MYIDGDTHYWPLRFIDKVKHPGKGHLEVVEDKGDMVRYGEVVPG
                     KVATYYRDGKKVHSFKEGRWSIALRAEFMKKDGFDKQVLIPDNRPLIYECDPELGRQL
                     ARAYNDTVAEDIQGDERFIGCAWIYLPDIQESVKELRRSFKELGLKAVKFNGGWGDGD
                     LDSEVLYPLYEEIAELNIPILLHPAARVYEAQHSHPWLVGSERFQGYQHFPTALGFPL
                     TYMVSASRLIFGG"
     gene            complement(790..1806)
                     /locus_tag="VLM90_04580"
     CDS             complement(790..1806)
                     /locus_tag="VLM90_04580"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12266.1"
                     /translation="MSRLLWVVLLNVAFLAVHGQTPAATPSGKKLVIAYAAMNARVCP
                     LWAPRERGFFAKYGIDAENLFVRGAPTLVAAMASNEIEVGYTGGTAVIGAVASGSDLK
                     VLSALTNRVTYELVARPGIKTAEDLRGKKFGVQAIGGTVWMGAILALEHLGLDAERDK
                     IAIIAAGDQSVLAQALANGTIDATVLDGVQSRPLQAKGFPILAELEKAKLPILSSSIV
                     AREPYIQKNPQIVENVLRAVIEGAAFCLSPAQKPNTLKILQKYLRISEKDAEEGYRDM
                     VMGLERKPYANPAGAINVIRLMKRSNPKIESVKPENLIDDRIMKKLDQSGFIDEILAK
                     YGVK"
BASE COUNT          369 a          570 c          515 g          395 t
ORIGIN      
        1 cgccgccgaa gatcaagcgc gacgcgctga ccatataagt caacgggaac ccaagagcgg
       61 tgggaaaatg ctggtagcct tgaaagcgct cgctgccgac cagccagggg tggctatgct
      121 gcgcctcata aacgcgcgcc gccggatgga gcaggatggg gatattcaac tcggcgatct
      181 cttcgtacag cggatacaac acttcgctgt ccaaatcgcc atcaccccat ccgccgttga
      241 acttcacggc ttttaggccc agctctttga acgaccggcg cagctccttc accgattctt
      301 gaatatccgg caaatagatc caggcgcaac cgatgaaacg ctcgtcgccc tgaatgtcct
      361 cggccaccgt atcgttgtag gctcgtgcca actggcggcc gagctcggga tcgcattcat
      421 aaatcagcgg ccggttgtcg gggatcaaga cctgcttatc gaagccgtct ttcttcatga
      481 actcggcgcg cagcgcgatg ctccagcggc cttccttgaa cgagtggact ttcttgccgt
      541 cgcgataata ggtcgccacc ttgcccggca ccacttcgcc gtagcgcacc atatccccct
      601 tgtcctcgac cacttcgagg tggcctttgc cgggatgctt caccttgtcg ataaaacgca
      661 gcggccaata atgagtatcg ccgtcgatgt acatagaacc tccaatttcg cgtaacttgg
      721 caatcgtcta tgaattgaac ttggaaggat ccctcacttt gttcgggatg acggccacgc
      781 acgcggccgt cacttcactc catacttcgc cagaatctca tcgataaagc cgctctggtc
      841 gagcttcttc atgatccggt cgtcgatcag gttttccggt ttcacgctct cgatcttggg
      901 gttgctgcgc ttcatcaggc ggatgacgtt aatcgccccg gccgggttgg cgtaaggttt
      961 acgctcgaga cccatgacca tatcgcgata gccttcctcg gcatccttct cggatatgcg
     1021 cagatatttt tgcaagatct tcagcgtatt gggtttctgc gcaggtgaca agcaaaacgc
     1081 cgcgccttcg atcaccgcgc gcaaaacgtt ctcgacgatc tgcggattct tttgaatata
     1141 gggctcgcgg gcgacgatcg aagaactcaa gatcggcagc ttggcttttt cgagctcggc
     1201 caaaatcgga aagcctttcg cttgcaaggg ccggctctgc acgccgtcga gcacggtcgc
     1261 atcgatggtg ccgttggcca gggcctgcgc gagcacggac tgatcgccgg cggcgatgat
     1321 ggcgatcttg tcgcgctccg catcgaggcc caagtgctca agcgcgagaa tcgcccccat
     1381 ccataccgtg ccgccgatcg cttgcacgcc gaacttcttg ccgcgcaggt cttcggcggt
     1441 tttaatgccg ggccgcgcca ccagctcgta ggttacccgg ttggtcagcg ctgacaggac
     1501 tttcagatcg gagccggagg ccacggcacc gatgacagct gtgccgccgg tgtagccgac
     1561 ctcaatttcg ttggaggcca tggcggcgac caatgtgggc gcgccgcgca caaaaaggtt
     1621 ttccgcatca atcccatact tggcgaagaa gccgcgttcg cgcggcgccc agagagggca
     1681 gacccgcgcg ttcatggcgg cgtaagcgat gactaacttt ttaccgcttg gagtggctgc
     1741 cggcgtttgg ccatgaacag ccagaaatgc aacgttgagc agcacaaccc atagcagtcg
     1801 cgacatgacg gccctcccat tccgtcattc ccgcggacgc gggaatcca
//
LOCUS       DATIRS010000367         3654 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1012311, whole genome shotgun sequence.
ACCESSION   DATIRS010000367 DATIRS010000000
VERSION     DATIRS010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3654
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1012311"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..751
                     /locus_tag="VLM90_04585"
     CDS             <1..751
                     /locus_tag="VLM90_04585"
                     /inference="COORDINATES: protein motif:HMM:NF024893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AsmA-like C-terminal region-containing protein"
                     /protein_id="HSQ12267.1"
                     /translation="TAAPGANSARLQGVLEIKAADLRPLLASFLPLLKDRLDGNISGQ
                     TQYDVMLGKSDTLAQSLRAAGDTTIQRGVIKDFNLLSQLLLRGSGSSVSPEAKARLPA
                     ALIELAKNNDTRFDTFKSNFIVDKGRISSANLILSTPDYTVTGAGWFALDRTTRWNGL
                     LVLSLGLTQEIQRDYRWIRHILDRRGRLAIPFRIDGTLPNVRIRIENRNLSQVLRGPQ
                     PRAKDRGSGDDRPPKEEKGWLPDTLDRFLNR"
     gene            763..1044
                     /locus_tag="VLM90_04590"
     CDS             763..1044
                     /locus_tag="VLM90_04590"
                     /inference="COORDINATES: protein motif:HMM:NF027581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4911 domain-containing protein"
                     /protein_id="HSQ12268.1"
                     /translation="MDLQEIYLEIAPEHIAYIKFIFESYEEVGIIRTVDRKKSIIVLL
                     AMPDFVDAARAIIDSLKQDIPLAEIPRPADLTDDWFMVELAEAMTAVQK"
     gene            1327..3456
                     /gene="rnr"
                     /locus_tag="VLM90_04595"
     CDS             1327..3456
                     /gene="rnr"
                     /locus_tag="VLM90_04595"
                     /inference="COORDINATES: protein motif:HMM:TIGR02063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008997 - ribonuclease R activity
                     [Evidence IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HSQ12269.1"
                     /translation="MTGNAQEKILGLLNKQPRARFTPAELQRRAGFERGDLQAVIDAL
                     RQLCRDGRVVRLKKNHYALPDRQNLLRGRVHAHPDGYGFLLLEDKDADDVYLNRREMR
                     RVMHGDQVMVRIDRKARGGSEAHIVQVIERGQKRLLGTYEEIDGRAFLIPMDARIGAM
                     PLKGAGAKLTEGKVIAAEISRFGSAMTPPEATVVQVMGDPNDPEVQAQSIIFRFGLPP
                     SFPPEVHREVKNAAYEINAAEIAQHEDLRELPIVTIDGENARDFDDAVYVRRKGQGYE
                     LFVSIADVAHYVRPETALDQEAYARATSVYFPDRAIPMLPEALSNGICSLNPNEERLT
                     KTAWIEFNGKGEAIRSRFFDSVIKSHARMTYTNVRRILVDQDPECLENYRDLVDGFKL
                     MEELALAIYANRKARGNLDFDLPEAEIVLDLQGLPEDIVRAERNIAHRIIEEFMIAAN
                     EAVARELTAKDFPTLYRVHAGPDEVALEALEPFLLSLGYRLPQDKENLPPLEIQRLLE
                     SARGKPEERVINRVLLRSMKQAVYQPENIGHFGLASACYTHFTSPIRRYPDLIVHRML
                     ARVLGGEKLKPKERADLLRTLQESGKHTSERERHAMDAEREMVSLKKAQFMMTKMGEE
                     FNGFVNSLVKFGLFVELDDYFIEGLVKMSSLTDDDYDYYEKEYLIKGRRHGKKFRLGD
                     NVRVRVAKINAFRSEIDFELVEPQQVS"
BASE COUNT          835 a         1130 c         1014 g          675 t
ORIGIN      
        1 aacggcggcc ccaggagcaa atagcgcgcg cttgcaaggt gtattggaaa tcaaagccgc
       61 cgacttgcgg ccgttgctcg cgagcttctt gccgctgctc aaagatcgtc tcgacggcaa
      121 catcagcggc caaacgcaat acgatgtgat gctgggaaag agcgacacgc tggcgcaatc
      181 gctcagggca gccggcgata cgacgatcca gcgcggtgtc atcaaggact ttaatttatt
      241 gtcacagctg ctcctgcgcg gcagcggctc cagcgtctcg ccggaggcca aggcgcgcct
      301 gccggccgcc ctgatcgagc tcgccaaaaa taacgacacc cgcttcgaca ccttcaagtc
      361 caatttcatc gtcgataaag gccgcatcag cagcgccaac ttgatcctct cgaccccgga
      421 ctataccgtc accggcgccg gctggttcgc cttggatcgt accactcgat ggaacggcct
      481 gttggtgctg tcgctgggct tgacccagga aatccaacgg gactatcgct ggatccgcca
      541 catcctggac cggcgcggcc gtttggcgat cccgtttcgc atcgacggca ccctacccaa
      601 cgtcaggatt cgcatcgaga accgcaactt gagccaagta ttgcgcggcc cccagccgcg
      661 cgctaaagat cgcggcagcg gcgacgaccg cccgcccaag gaagaaaagg gctggctccc
      721 cgacaccctg gatcgcttcc tcaaccgcta atcggaaccg ccatggattt gcaagaaatc
      781 tatttagaga tcgcccccga gcatatcgcc tatatcaaat tcatcttcga gtcctacgaa
      841 gaagtcggca tcattcgcac ggtggaccgg aagaaatcga tcatcgtgct gctggcgatg
      901 cccgactttg tcgacgccgc gcgcgcgatc atcgactcgc tcaaacaaga tattcccctg
      961 gcggaaatac cccggcccgc cgatctgacc gacgattggt tcatggtgga gttagccgag
     1021 gcgatgacag cggtgcaaaa ataatttccg caggccgtca tttcgaagcg tagccaaaaa
     1081 atcttttcgg actgtcgaat gaacaacctc gtcacgacgt ttgcggcagc ggaccgaatc
     1141 aaacaagctt taagcatagt tgtagggtgg gggaggcgta ccgcgccgat acccaccgtc
     1201 gggggatgat gggtatcgcg gctgctcaac ccatcctaca ttcgaatcaa aagcgaacgt
     1261 tcgataacca ctcgaaacca agagattgaa attccgcgga ttccagtaga agctcgcgca
     1321 acacctatga ccggcaacgc acaagaaaaa atcctcggtc tgctcaacaa acagccgcgc
     1381 gcccgcttta cgccggctga gctgcaacgg cgcgccggct tcgaacgcgg cgatttacag
     1441 gcagtcatcg acgccctgcg ccaactctgc cgcgacggcc gcgtggtccg gctcaagaaa
     1501 aatcattacg ccctacccga ccggcaaaat cttttgcgcg gccgcgtcca tgcccacccc
     1561 gacggctacg gctttcttct cctggaagat aaggacgcgg acgatgttta cttgaaccgc
     1621 cgcgagatgc gccgggtcat gcatggcgat caagtgatgg tgcgcatcga ccgtaaagcg
     1681 cgcggcggca gcgaagccca tatcgtccaa gtcatcgagc gcggtcaaaa acgtttgctc
     1741 ggcacctacg aggagatcga cggtcgcgcg ttcttgatcc cgatggacgc gcgcatcggc
     1801 gccatgccgc tcaagggcgc cggcgcgaaa ttgacggaag gcaaagtcat cgccgccgag
     1861 atcagccgct tcggcagcgc catgacgccg ccggaagcca ccgtcgtgca agtcatgggc
     1921 gaccctaacg atcccgaggt gcaggcgcaa tcgattatct tccgcttcgg cctgccgccg
     1981 agctttccac cggaagtgca tcgcgaagta aaaaatgccg cctatgaaat caacgcggca
     2041 gaaatcgccc agcacgaaga tctgcgtgaa ttgcccatcg tcaccatcga cggcgagaac
     2101 gcccgcgact tcgacgacgc cgtctacgta cggcgcaagg gccaaggcta cgagcttttc
     2161 gtctccatcg ccgacgtcgc ccactatgtc cgcccggaga cggcgctcga ccaagaagcc
     2221 tatgctcgcg ccaccagcgt ctactttccc gaccgagcga ttccgatgtt gcccgaagcg
     2281 ctgtccaacg gcatctgtag tttgaatccc aatgaagagc gtctgaccaa aaccgcctgg
     2341 atcgaattca acggcaaagg cgaagcgatc cgcagccgct tcttcgactc ggtgatcaaa
     2401 agccacgcgc gcatgactta caccaatgtc cggcgcatcc tggtcgacca agatcccgaa
     2461 tgtctggaga attatcggga tctagtggac ggcttcaaac tgatggaaga gctggcgctg
     2521 gcgatctatg ccaaccgcaa agcgcgcggc aatctcgatt tcgatctgcc ggaggccgag
     2581 atcgtcctcg acctgcaagg cttgccggaa gacatcgtcc gcgccgagcg caatatcgcc
     2641 caccggatca ttgaagaatt catgatcgcc gccaacgaag cagtggcgcg cgagctcacg
     2701 gccaaagatt ttcccacgct ctatcgtgtt catgccgggc cggacgaagt cgcgctcgaa
     2761 gccctggagc cttttctcct gagcctgggc tatcgtctgc cccaggataa agagaacctg
     2821 ccgccgctgg agatccagcg gctgttggaa tccgcccgcg gcaaaccgga agagcgggtg
     2881 atcaaccgcg tgctgttgcg ctcgatgaaa caggcggttt atcagcccga gaatatcggc
     2941 cacttcggcc tagcgtcggc gtgctacacc cacttcacct cgccgatccg ccgctatccc
     3001 gatctgatcg tccatcgcat gctcgcccgc gtcctgggcg gagaaaagct taaacccaag
     3061 gaacgcgccg atctgctgcg cacattgcag gagtccggca aacacacctc cgaacgcgag
     3121 cgccacgcca tggacgccga gcgcgagatg gtcagtttga aaaaagccca gttcatgatg
     3181 accaagatgg gcgaggagtt taacggcttc gtcaacagcc tggtcaagtt cggcctgttc
     3241 gtggaactcg acgactactt catcgaaggc ttggtaaaaa tgtcatcgct caccgacgac
     3301 gactacgatt attacgaaaa ggaatacctg atcaaaggcc gccgccacgg caagaagttt
     3361 cgcttgggcg acaacgtgcg ggtaagagtg gcgaagatca atgcgtttag gagcgagatc
     3421 gatttcgaac tggtcgagcc ccagcaggtt tcatgattga ggcaagaagt gattccgaca
     3481 tttgcttccc atgacactag cgccgcagaa cttcggagcg agacaaagac gtcacgctgg
     3541 cggcttggta gttagcaact ggtgcgcgat gcgcttcggc ttgcagtcaa tcaaatcgcc
     3601 gcgcagacgg caattagagc tctcttttaa gcgtgcggtt ttgtcttggc tttc
//
LOCUS       DATIRS010000368         3083 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_913855, whole genome shotgun sequence.
ACCESSION   DATIRS010000368 DATIRS010000000
VERSION     DATIRS010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3083)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3083)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3083
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_913855"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1296)
                     /locus_tag="VLM90_04600"
     CDS             complement(<1..1296)
                     /locus_tag="VLM90_04600"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSQ12270.1"
                     /translation="MAKAEFKVVGTSPARMGGIDRVIGKGVYGIDLMLKDQLQGAILR
                     SQYAHAKIISIDTSEAKKIPGVHAVVTAEDAPNVRYGRSYIDRHILARGKVRFMGDPV
                     AAVAADTLAIAKQALKKIKVTYEPLPVALDAEAATKPDAPVLHEDMPLPKTTPAGMKN
                     VCGHAVVHVGDPDKAMAEADLVVEEVYETKMIHPQYLEPRIAAAQMEPNGRLTVWANA
                     QAPFPVRQETAKMLGLRLNDVRVISAGLGGGFGGKGSGITSGAAVEPICGLLAMKTKR
                     AVMIVLDKAEETISTTIRSGARMYIKTGVKKDGTILARTGKVFYDAGGYSGFGVQAGG
                     RCTTMLGGWYLMPNCHIEGFSVYTNKQVCGPVRGPGGPQAAFAVESHMDSIAAKLGMD
                     PTEFRLKNIPKAGDKIVGVPKLRDVSLGETIKIAKEQIGW"
     gene            complement(1299..1775)
                     /locus_tag="VLM90_04605"
     CDS             complement(1299..1775)
                     /locus_tag="VLM90_04605"
                     /inference="COORDINATES: protein motif:HMM:NF013923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HSQ12271.1"
                     /translation="MSVTINTTINGKAVSASAEASASLLEFLRDTLEMKGSKLCCNTG
                     ECGACTVIYNGKPINTCVTMAADANGAQILTIEGLADGDKLHPVQQAFIDTGAVQCGY
                     CTPGFIMSVKALLDRTTKPTPGDIEEAVSGNICRCTGYNKIVDAIHLAADRVAGRA"
     gene            complement(1775..2644)
                     /locus_tag="VLM90_04610"
     CDS             complement(1775..2644)
                     /locus_tag="VLM90_04610"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HSQ12272.1"
                     /translation="MEYFEPKSIGDALTLLSKHGAEAKVIAGGTDVMVDIKFKEEPGC
                     LVNIKKIPSLAGISESGGALRIGALTTIRELETSALVRDKLPVLWEASHQFASLQVRN
                     TATIGGNICRASPSGETLAPLLVLEANAVLAFSDGERSEPFKSFFQGPGKSAAGAKGL
                     LTEIDVPIPPPGSKGVYLKHAVRGAMDIAMVGVAVLLTPDSGKNNVQEVRIGLGAVAP
                     TPLRAPKTEALLRGKPLTAALLKEAGALAASEASPISDQRSSAENRRWIVEALTRRGL
                     EQTWKAATGKEVV"
BASE COUNT          510 a          917 c          977 g          679 t
ORIGIN      
        1 ccagccgatt tgttctttgg cgatcttgat cgtctcaccg agcgaaacat cgcgcagctt
       61 gggcacgcca acgatcttgt cgccggcttt gggaatgttc ttaagccgga attccgtcgg
      121 atccatgccg agcttggcgg cgatggagtc catgtgcgac tccaccgcaa acgccgcttg
      181 cgggccgcca gggccgcgca ctgggccgca cacctgtttg ttggtgtaga ctgaaaagcc
      241 ttcgatgtgg cagttgggca tcaagtacca gccgccgagc atggtggtgc agcggccgcc
      301 ggcctgaacg ccgaatccgg agtagccgcc ggcgtcgtag aaaactttgc cggtgcgggc
      361 gagaatggtg ccgtcttttt tcacgccggt tttgatgtac atgcgcgcgc cggagcggat
      421 cgtcgtcgag atggtttcct cggctttgtc gaggacaatc atcaccgctc gcttggtctt
      481 catcgctaac aggccgcaaa tcggctcgac ggcggcgcct gaagtgatgc cgctgccttt
      541 gccgccaaat ccgccgccca agccggcaga gatcacgcgc acgtcattca atcgcaggcc
      601 cagcatcttc gctgtttcct ggcgtaccgg gaacggcgct tgggcgttgg cccacaccgt
      661 cagccgtccg ttgggttcca tctgcgccgc ggcgatgcgc ggctccaaat actgcggatg
      721 gatcatcttg gtttcgtaaa cttcctcgac tacgagatcg gcttcggcca tcgccttgtc
      781 gggatcgccg acatggacga cagcgtggcc gcagacgttc ttcatcccag ccggagtggt
      841 tttcggcagc ggcatatctt cgtgcagcac cggcgcgtct ggtttggtcg ctgcctcggc
      901 gtcgagcgcc acgggcagcg gctcgtaggt gactttgatt tttttgagcg cctgcttggc
      961 gatggccaga gtatcggcgg cgacggcggc gaccgggtcg cccatgaagc gcactttgcc
     1021 gcgcgcgagg atgtggcggt cgatgtagct gcggccatag cgcacgttgg gggcatcttc
     1081 ggcggtaacc acggcgtgga cgccggggat tttcttcgct tcgctggtgt cgatgctgat
     1141 aattttcgcg tgggcgtatt ggctgcgcag tatcgcgccc tgcagttggt ctttgagcat
     1201 caggtcgatg ccgtaaacgc ccttgccgat gacgcggtcg atgccgccca ttcttgccgg
     1261 gctggtgccg acgactttga attcagcttt tgccatgact aagccctccc tgcgacgcgg
     1321 tcggcggcga gatgaatcgc gtcgacgatc ttgttgtagc cggtacagcg gcagatgttg
     1381 cccgagaccg cctcttcgat gtcccccggc gtcggcttgg tggtgcggtc aagcagcgcc
     1441 ttgaccgaca tgatgaagcc cggcgtgcag tagccgcact gcacggcgcc ggtgtcgatg
     1501 aaagcttgct gcaccgggtg gagcttgtcg ccgtcggcga gtccttcgat ggtgaggatc
     1561 tgcgcgccat tggcgtcggc ggccatggtc acgcaggtgt tgatcggctt gccgttataa
     1621 atcaccgtgc aagcgccgca ctcgccggtg ttgcagcaga gcttgctgcc tttcatttcc
     1681 aaagtgtcgc ggagaaattc caacagcgaa gctgacgctt cggcgctggc gctgaccgct
     1741 ttgccattga tggtcgtatt gatcgtgacg ctcattagac tacctccttg ccggtggcgg
     1801 ctttccaggt ttgttcgaga ccgcggcggg tcaacgcttc gacgatccag cggcggttct
     1861 cggcgctgct gcgctgatcg ctgatcggac tagcttcgct ggccgccagg gcgccggctt
     1921 ctttgagcag cgccgcggtg agcggtttgc cgcgcagcag cgcttcggtc ttcggcgcgc
     1981 gcagcggtgt cggcgcgacc gcgcccaggc cgatgcggac ttcttgcacg ttgttttttc
     2041 cgctatccgg cgtgagcagg accgcgacgc cgaccatggc gatatccatg gcgccgcgca
     2101 cggcgtgctt caagtagacg cccttgctgc cgggcggcgg aatcggcacg tctatttctg
     2161 ttaacaaccc tttggcgccg gcagcgcttt tgcccggccc ctgaaaaaat gacttgaacg
     2221 gttcgctgcg ctcgccgtcg gagaaagcga gcacggcgtt ggcttccaac accaaaagcg
     2281 gcgcgagcgt ttcacccgac ggtgaggcgc ggcagatatt gccgccgatg gtggcggtat
     2341 tgcgcacttg cagcgacgcg aactggtgcg atgcttccca gaggacgggc aacttatcgc
     2401 gcaccagcgc gctggtttcg agctcccgga tggtggtcag cgcgccaatg cgcagcgcgc
     2461 cgccgctttc cgagatgccg gccaggctgg gaattttttt gatattcacc aggcagcccg
     2521 gctcctcctt aaatttaatg tccaccatca cgtcggtgcc gccggcgatg actttggcct
     2581 cggcgccatg cttggacaac agcgtcaagg cgtcgccgat ggatttcggt tcaaagtatt
     2641 ccatatcgtt tgccccttgt ttcttgtggg taatctacgg aacgtagact ccactttcct
     2701 cttagcctat ctcggatgaa gttagcaaga ccaacagccc cggcagctgc agtttcaagt
     2761 ttgttccact gaatcgtcga gttttcccgg cggcgatctt tgcattgccg tcgattcatg
     2821 gcaacaatgt cgatggggtg atcgaagcaa ttgcgcggtg gacgcgcatt tatccggcga
     2881 cctccgacga tcggagtcaa gccggtgaat gacggtccct gcaggtgatc agaatatcgt
     2941 tgacgtggta gagaaaaatc cctacgaagc gatcttgacc gcgagcggcg cagcgcgcag
     3001 gcaggtgacg caggaggttt acgacgacgt ctaccgcaag cggcctgcgg ccgatttcgg
     3061 caaactgccg tcgaagagta ggc
//
LOCUS       DATIRS010000369         1560 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_225747, whole genome shotgun sequence.
ACCESSION   DATIRS010000369 DATIRS010000000
VERSION     DATIRS010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1560
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_225747"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            186..1127
                     /locus_tag="VLM90_04615"
     CDS             186..1127
                     /locus_tag="VLM90_04615"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ12273.1"
                     /translation="MQLLVASGPGATTDISARLVGRYLGKHIPGNPSIVVQNMPGAGG
                     VVAANHLFNIAKPDGLTIAAMSRANYIEQMVGRPEVKTDFRKLSWIGSFNKSPMMVAC
                     RTDTEYKTIAAIRTAKTPPRFGQSGTGSISYVFANLMEKILDLKIKNVTGFKSGRDTD
                     LGLERGEIDCRATSDITVIREPWTRWVKESYVTFLVQQGPDKSPLLPPAPTVGELARP
                     EAKPYLNLMNVMLAYTEFDRPFAAPPGVPKERLQILRESFARMLKDPEFAAAAKKLLD
                     WDGATSLSGEQLQKKLIDTVTQPPEVLKRVKEILAES"
     gene            complement(1133..>1560)
                     /locus_tag="VLM90_04620"
     CDS             complement(1133..>1560)
                     /locus_tag="VLM90_04620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12274.1"
                     /translation="FPMGIEIYQGKPIFYSVGNFIFQNETVGFFPADAYERFDLDLKA
                     TPSDFLDARTAGGKKGHPSDPAYWENMFAVCAFTSGKLKEIRIHPIDQGFGKPRPQRG
                     RPVLAEGDVAERVIERVARLSRRYGTKVTARNGVGTIEL"
BASE COUNT          336 a          454 c          458 g          312 t
ORIGIN      
        1 atgcttcgca tctctgggcc ttttggcctt ttaggtgttc gcgggacaag gaggttgaaa
       61 tgccggaccg acaagtccgc cgccgatgtc gaatccgaga ggttggtttt gcaatcctgg
      121 ttttgttcgg cgccccgcaa ggagcgcggg cgcaagcaga caagccgttc ttcgaaggaa
      181 agacgatgca attgctcgtc gcgagcggcc ccggcgctac cacggacatc agcgcccgtc
      241 tcgtcggccg ctacctgggc aagcacatac cgggcaatcc gagcatcgtc gtgcaaaaca
      301 tgccaggagc aggcggagtt gtcgcggcca accacctgtt caacatcgcc aaacccgacg
      361 gtctgacgat cgccgccatg agccgcgcta actacatcga gcaaatggtc ggccggccgg
      421 aggtgaaaac cgattttcgc aaactcagtt ggatcggcag cttcaacaag tcgcccatga
      481 tggtcgcctg ccgcacggac acggagtaca aaaccatcgc ggcgatccgc acggcgaaaa
      541 cgccgccccg tttcggtcaa tcggggaccg gcagtatcag ctacgtgttc gccaatctga
      601 tggaaaagat tcttgattta aagatcaaaa acgttaccgg gttcaaatcc ggccgcgaca
      661 ccgacctggg gcttgagcgc ggtgagatcg attgccgtgc aacttccgac atcacggtga
      721 tccgcgagcc gtggacccgg tgggtcaagg agagctatgt caccttcctc gtccagcaag
      781 ggccggacaa gagcccgctg ttgccgccgg cgcccaccgt cggggaactc gcgcgcccgg
      841 aggcgaagcc gtacctcaat ctgatgaatg ttatgctcgc ctacaccgag ttcgatcggc
      901 cgtttgccgc accgcctggc gtgccgaagg agaggttgca gattctccgc gaaagctttg
      961 cgcgcatgct gaaagatccc gagttcgccg ccgccgcgaa aaaattattg gactgggatg
     1021 gagccacgtc cctcagcggc gagcagctgc aaaaaaagtt gatcgacacc gtcacccagc
     1081 cgcccgaggt cctaaagcgg gtaaaggaaa ttctcgcgga gtcatagtcg attcagagct
     1141 caatagtccc caccccattc cgagcggtga ctttggtgcc gtagcggcgc gagagtcggg
     1201 caactcgttc gatgacccgc tcggccacat cgccctcggc gagtaccggc ctgcctcttt
     1261 gcggcctcgg tttgccaaaa ccttggtcga tgggatgaat tctgatctct tttaattttc
     1321 cgctggtgaa cgcgcagacg gcaaacatgt tttcccaata ggccggatcg ctaggatggc
     1381 cttttttgcc gccggccgtc cgggcgtcga gaaaatcgga cggtgttgct ttcaggtcga
     1441 ggtcgaatct ttcgtaggcg tcggcgggaa aaaatccgac ggtttcattt tgaaaaatga
     1501 agttgccgac gctgtagaaa atcggcttgc cttggtagat ttcaatgccc atgggaaaat
//
LOCUS       DATIRS010000370         2232 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1896644, whole genome shotgun sequence.
ACCESSION   DATIRS010000370 DATIRS010000000
VERSION     DATIRS010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2232
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1896644"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..441)
                     /locus_tag="VLM90_04625"
     CDS             complement(<1..441)
                     /locus_tag="VLM90_04625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12275.1"
                     /translation="MKSSGLLLFCLMLAGCGATTSTPTSVQADRPAGEFFESADYFVV
                     VAGSGATAQNLAAKYLGDADKDWMIEDFNGSATFAAGQQVAIPKRPWNLSGVTPTGYQ
                     LVPILVYHDLAPQAKGRMVMGAKGFEEQMRYLKANGYRVITLKEY"
     gene            complement(482..1873)
                     /locus_tag="VLM90_04630"
     CDS             complement(482..1873)
                     /locus_tag="VLM90_04630"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HSQ12276.1"
                     /translation="MADANKKKIRLSLKLKLSLLITLLIVLSVVMVGDYLLDQAKDSL
                     RGEITKRGSTIAQHLAASAKNPLVTRDELTLSLLVRDALKDPDVAYVIVVDEDSKIVA
                     HGDLNSIGKKYQRPGALKPLGNDTLVQSYADSAGGEIIDFAVPLEFSKVRVGALYLGF
                     SDRSIRQTIERARGQTIWITGLMIVGGVLGAVALSIVLTRPLLTLAQGTKTIAAGSFD
                     VVLPVSSRDEIGDLTVSFNEMAKNLKEKEKIKHAFSSYVARQVVDEILKNPDGIMLTG
                     ERRDVTVIFCDLRGFTPLAEKLPPEEVVAALNDFYSLMIDTTIKNDGSINKFLGDAVM
                     AIFGAPVHYADHSLRAIKTAVDMQTQVAALSARRVSNGKPPIAIGIGVSAGEAVAGTV
                     GTESQMEYTVIGDRVNLAARLESNAKPGQILISQETYDHVADQVKARSLGPMSVKGRE
                     EAVTVFEILGMAD"
     gene            complement(1959..2117)
                     /locus_tag="VLM90_04635"
     CDS             complement(1959..2117)
                     /locus_tag="VLM90_04635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12277.1"
                     /translation="MQYVDDLRRVQIPGVHLFCGGVPVPFYTRMGYCELSVAPVRGHN
                     VHAMGLRL"
BASE COUNT          475 a          671 c          612 g          474 t
ORIGIN      
        1 atactctttc agcgtaatga cgcgatagcc gttggccttg aggtagcgca tctgctcttc
       61 gaaacctttg gcgcccatca ccatgcgtcc cttcgcctga ggcgcgagat cgtgatagac
      121 caggatcggc accaactggt agccggtcgg cgtcacaccg gaaagattcc acgggcgctt
      181 gggaatcgcc acctgctgtc ccgccgcgaa agtcgccgag ccgttaaaat cttcgatcat
      241 ccagtcttta tcggcatcgc cgaggtattt ggcagcgaga ttctgcgccg tagcgccgct
      301 tccagcgacg acgacaaaat aatccgcgga ttcgaaaaac tcccccgccg gccggtcggc
      361 ttggaccgat gtaggggttg aagtagtcgc gccgcagccg gcgagcatta aacaaaataa
      421 aagcaaccca ctcgatttca taagtctttg tctcaattcc ctgtctctat ctgtcaagtg
      481 tctaatccgc catgccgaga atttcaaata ccgtgaccgc ctcttccctg cccttgacgc
      541 tcatgggacc aagactacgc gctttgactt gatcagccac atggtcgtag gtttcttggc
      601 tgatgaggat ctgccccggc ttggcattag actccagccg cgcggccaaa ttgacccggt
      661 cgccgatgac cgtgtactcc atctggcttt cagtgccgac ggtgccggcc accgcctcac
      721 cggcgctgac gccgatgccg atagcgatgg gcggcttgcc gttactcacc cttcgcgcgc
      781 tcagtgccgc gacttgggtt tgcatatcca ccgcggtttt gatggcacgc agcgaatgat
      841 ccgcatagtg caccggcgcg ccgaagatcg ccatcacggc gtcgccaagg aatttattga
      901 tgctgccatc gttcttaatg gtcgtgtcga tcatcaagct ataaaagtca ttgagcgcgg
      961 cgacgacttc ttcaggagga agcttctccg ccaacggggt aaagccgcgc agatcgcaaa
     1021 atattacggt cacgtcgcgg cgttcaccgg tgagcatgat gccgtccggg tttttcagaa
     1081 tctcgtcgac cacctggcgt gccacatagc tgctaaacgc gtgcttgatc ttttccttct
     1141 ccttcaagtt tttcgccatc tcattaaaag acacggtgag atcgccgatt tcatcgcgcg
     1201 aagacaccgg caggacgacg tcaaaactcc ccgccgcgat ggtcttggtc ccttgagcga
     1261 gcgtgagaag cggccgggtc aatacgatcg acagtgcgac ggcaccgagc acaccgccga
     1321 cgatcatcaa gccggtgatc cagatcgtct ggccgcgcgc acgctcaatg gtttggcgga
     1381 tcgagcggtc gctaaaacca agataaagcg cgccgacgcg caccttgcta aactccagag
     1441 gcaccgcgaa gtcgatgatc tcgccgcccg cagagtcggc gtaactctgc acaagggtgt
     1501 cgttgccgag tggtttcaaa gcgccggggc gctgatactt tttgccgatg gaattcaaat
     1561 cgccatgggc gacgatctta ctgtcctcat cgaccacgat cacgtaggcg acatcgggat
     1621 ctttaagcgc gtcgcgaacc agcaggctga gcgtcagttc gtctcgagtg accaggggat
     1681 ttttggcgct ggccgcaaga tgctgggcga tggtgctgcc acgcttggtg atctcgccgc
     1741 gcagactatc cttggcctgg tccaataaat aatcgccgac catgaccacc gacagcacga
     1801 tcagcaacgt gatcagcaga cttagtttca gttttaacga caggcggatt tttttcttgt
     1861 tggcatcggc catagttgcg aatcaacggg gtaattgagt taggcaatga actctattga
     1921 agcgttgtcg ccacgtcaag cgaatggccc cgcagcgatt acaaacgtaa ccccatcgcg
     1981 tgcacgttat ggccgcgcac cggggcaacc gaaagttcgc aatatcccat gcgggtgtag
     2041 aatggcacgg gaactccccc gcagaacaga tgcacgccgg gaatctgcac tcgccgcaaa
     2101 tcgtcgacgt actgcatcat caaccgcgtt ccgccaatcg cccgaggaag tcgccgagac
     2161 cttcgttgcg atcttcctcg acggcatgcg cgcggcgccc gaatccccgc gaaggagccg
     2221 tcgtggctga ag
//
LOCUS       DATIRS010000371         3507 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1799049, whole genome shotgun sequence.
ACCESSION   DATIRS010000371 DATIRS010000000
VERSION     DATIRS010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3507
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1799049"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..184
                     /locus_tag="VLM90_04640"
     CDS             <1..184
                     /locus_tag="VLM90_04640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12278.1"
                     /translation="LAVRYGSRIHPLGFKVSHQKTDDDVFRSVDEGGWMITYENEDPE
                     IPKRYQAALWANGVIS"
     gene            complement(1042..2319)
                     /locus_tag="VLM90_04645"
     CDS             complement(1042..2319)
                     /locus_tag="VLM90_04645"
                     /inference="COORDINATES: protein motif:HMM:NF039910.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSQ12279.1"
                     /translation="MLPREENDMLTLVSPDKPMGQLMRRYWIPALLAAEIPEPDCPPV
                     RVRLLGEDLVAFRDTQGRVGLLEEHCAHRGTSLFFGRNEECGLRCIYHGWKYDIDGKV
                     LDTPAEPAGSTLKDKVRQVAYPCKEAGGMIWTYMGAPDKQPLLPNYEWMTMAPENLYV
                     TRSIQDCSWLQGLEGECDSSHLSFLHRSFTGDRPRGGGDGDLYAADTAPTLEGIEMDY
                     GVRMLSCRKIAADKVYLRVSNIVMPCHGFIPTGGIKGNPEGYTIHSHVPVDDTHSMRY
                     NIHFRRNRPIEPEERQHDEEIGPDFIKIRNLQNDYLIDREKQRRENFTGMGTIFLNHD
                     ACATETMGPIYDRSQEHLGVSDMTVIAVRKFLLNAARAVASGKEPPHIIRTAAQTDVR
                     HVACIATTIPASRDPNTYVVEQLKKDKYWEAEN"
     gene            complement(2350..3504)
                     /locus_tag="VLM90_04650"
     CDS             complement(2350..3504)
                     /locus_tag="VLM90_04650"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSQ12280.1"
                     /translation="MALTAQENTDLIRVGPGTPCGTMMRRYWHPVGFAAELKGKPVRR
                     MLLGEDLVLFRDEQGRLGLIGARCPHRGTSLHLGYIEDGGLRCCYHGWLFDVSGRCLE
                     QPTEPPEANFKDKMRQPSYKVEELAGVIFAYLGPEPAPLLPRYDVLVREDGIRSLQGR
                     TASCNYLQMVENTVDQHHFKWLHRTPNTKKWTDPVLTSEYFDYGIRDTFARTGGGERY
                     QTLSYFIMPTMNKTGYHVPESHPCGMSANHPGYEALRWRVPADDTHTMHFTVYFAPVV
                     DDKPTGNIPPDGAAKGVVETTPGQYRYDEATGYLARGDQDRAAQESQGVICDRTIEHL
                     GVSDKGVIMLRKLYKDSMDAIAAGQDPIGTIRDPAKNRIVEIAPGEFKIG"
BASE COUNT          631 a          930 c         1092 g          854 t
ORIGIN      
        1 tctcgccgtg cgctacggca gccgcattca tccattgggc ttcaaagtct cgcaccagaa
       61 aaccgacgac gatgttttcc gcagcgtcga cgaaggcggc tggatgatca cctacgagaa
      121 cgaggacccg gagattccca agcgctatca ggcggcgctt tgggcgaacg gggtgatttc
      181 ataaatttcc gttcaagggt tcaaggttca aaagttcaac gggtggaaga gccagcatgg
      241 ttggcttcac ttggtatttt tggaattctt gaacactaga gctgctcacg ttgcgctgcg
      301 gttgcggtct gaacttagga tagcgcattg gttcaacccg tttccaggta tgcgatcatc
      361 ttggtttaat gtcgtacgga acattacgca gtgggggtgt gttctgttgc ccccacagag
      421 atagggccag ttcgcgattc tggtcggcat aaacattgtc atctctgaaa tcgatgtagc
      481 ggtggtcacg taggtatgat gttatctcgg tggtgtcgcg gtagacccct atgatgcgga
      541 aggtcgaatc gcgcatgcgc ctggcgtttg ctagctgcat ttcgaaatga acacctccag
      601 atttctcatg gtcaaccgct gcaaccgaag ctgctgtgat aacgaacagc agcgagttgc
      661 actcgcgatc tatttcggat gtcatgtagt cactgaatga ctgcccgtaa tcaacttcga
      721 agtcgtcgag cttggcatcg aatgatgcct caaacctcca acatttcgcg acgtgacaac
      781 ggttgattaa actttaggtc agatggtcct agctcaaccc ctagttgttc aagtcttgac
      841 gactccggtt tcgtgagtag atatttctta atttaatagt cactcatttt cattgcccgt
      901 aagtccgacg gaacggttac cgttcgtgga gacttgtctt ggcgggtctc ggcccgtcac
      961 cttggcgttt tcgcgccgtt gcgggagaca ttccgatttt gtttgcgttc ccttcgactt
     1021 tgctcggggc atgcttcgcg gttaattctc cgcttcccag tatttgtctt tcttcaactg
     1081 ctcgacgaca tacgtattgg gatctcggct cgcggggatt gttgtggcga tgcaggcgac
     1141 gtggcggacg tcggtttgcg cggcggtgcg aatgatgtgc ggcggctcct tgccgctcgc
     1201 gacggcgcgg gcggcgttga gcaggaattt gcgcacggcg atgacggtca tgtcgctgac
     1261 gcccaagtgt tcttgggagc ggtcgtagat cggtcccatg gtttcggtgg cgcaggcgtc
     1321 gtggtttaaa aagatcgtac ccatgccggt gaagttttct cgccgctgct tttcgcggtc
     1381 gatgagatag tcattttgca ggttgcgaat tttaataaag tcaggaccga tctcttcgtc
     1441 gtgttgtctt tcttccggct cgatgggtcg gttgcggcgg aagtggatgt tgtagcgcat
     1501 gctgtgggtg tcatcgaccg gcacatggga gtggatcgtg tagccttcgg ggtttccttt
     1561 gatgccgccg gtggggatga agccgtggca gggcatgacg atattcgaca cgcgcaggta
     1621 aaccttgtcg gcggcgattt tgcggcatga caacatgcgg acgccgtagt ccatctcgat
     1681 gccttcgaga gtcggcgcgg tgtcggcggc gtaaagatcg ccgtcgccgc cgccgcgcgg
     1741 ccggtcgccg gtgaaagatc ggtgtaagaa cgacaggtgc gaggagtcgc attcgccttc
     1801 gaggccttgg agccaactac agtcttggat cgaccgggta acgtagagat tttccggcgc
     1861 catggtcatc cactcgtagt tgggcaagag cggctgcttg tccggcgcgc ccatgtaggt
     1921 ccaaatcatg ccgccggctt ctttgcacgg gtaggcaacc tggcgcactt tgtctttgag
     1981 cgtgctgccg gcgggctccg ccggggtgtc gagcaccttg ccgtcaatgt catatttcca
     2041 cccatgatag atgcagcgca ggccgcactc ttcgttcctg ccaaaaaaca gcgacgtgcc
     2101 gcggtgggcg cagtgttctt cgagcaggcc gactcggcct tgagtatcgc gaaaggcgac
     2161 cagatcttcg ccgagcaagc gcacgcgcac gggcgggcag tcgggctcag ggatttctgc
     2221 agcgagcagc gccggtatcc aatagcggcg catcagttgg cccatcggct tgtccgggct
     2281 tacgagagta agcatgtcgt tttcttcgcg tggcagcatg gcttggtcct cttgagtgct
     2341 gaaagtcgat cagccgattt tgaattctcc cggcgcgatt tcgacgatgc ggttttttgc
     2401 cggatcgcgg atcgtgccga tggggtcttg gccggcggcg atggcatcca tggagtcctt
     2461 gtaaagcttg cgaagcatga tcacgccttt gtccgacacg cccaagtgtt cgatggttcg
     2521 gtcgcaaatt accccttggc tttcttgggc agcgcggtct tggtcgccgc gcgccagata
     2581 gccggtcgct tcgtcatagc ggtactggcc tggtgtggtt tcaaccacgc ctttggccgc
     2641 gccatccggc gggatgttgc cggtcggttt gtcgtcgacc accggcgcga agtagacggt
     2701 gaaatgcatc gtgtgggtgt cgtcggcggg cacgcgccaa cgcagcgctt cgtagcccgg
     2761 atgattggcc gacatgccgc agggatggct ttccgggacg tgatatccgg tcttgttcat
     2821 ggtcggcatg atgaagtagc tgagtgtctg atagcgctcg ccgccgccgg tgcgcgcgaa
     2881 ggtgtcacga atgccgtaat cgaagtactc cgaggtcagc accgggtcgg tccatttttt
     2941 ggtattgggc gtgcggtgca gccacttgaa gtgatgttga tcgacggtgt tctcgaccat
     3001 ctgcaaataa ttgcagctgg cggtgcgccc ttgcagcgaa cggattccgt cctcgcgcac
     3061 cagcacgtcg tagcgcggca acaacggcgc cggctccgga cccaggtagg cgaagatgac
     3121 accggcgagt tcttcgactt tgtaggatgg ctggcgcatt ttgtctttga aattcgcctc
     3181 cggcggttcc gtaggttgtt ctaaacagcg gccgctcacg tcgaacagcc agccatgata
     3241 acagcagcgt aatccgccgt cctcgatgta gcctaaatgc agcgatgtgc cgcgatgcgg
     3301 acagcgggcg ccgatcaggc cgagtcgtcc ttgctcgtca cggaataaaa ccagatcttc
     3361 gccgagcagc atgcgccgca ccggtttgcc tttgagttcg gcggcgaagc cgaccggatg
     3421 ccagtagcgg cgcatcatcg tgccgcaggg cgtgccgggc ccgacgcgaa tcagatcggt
     3481 gttttcttgg gcggtgagtg ccattta
//
LOCUS       DATIRS010000372         5086 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_126948, whole genome shotgun sequence.
ACCESSION   DATIRS010000372 DATIRS010000000
VERSION     DATIRS010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 5086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5086
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126948"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..719)
                     /locus_tag="VLM90_04655"
     CDS             complement(<1..719)
                     /locus_tag="VLM90_04655"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSQ12281.1"
                     /translation="MISKIVLPLDGSPVAEIALPYGRALAQGLNLPVTLLSAIDLEEI
                     ARHVATERGLFLDTLDDFETRRRHEYLTSTAKSFAGVAVECQVKKGVAADSIVEHAAT
                     DKNSLIVMATHGRSGLQRWLLGSVAEKVLRATANPLLLVRAAEGGAINGVQKLDCIIV
                     PLDGSSIAEQVLPSVAEVAKQLDLEVILFRSYNVPYASYYEGGGSYAVDLPRLSAAIE
                     TDVQHYLEERCTGLTKAGLVKV"
     gene            complement(747..1658)
                     /locus_tag="VLM90_04660"
     CDS             complement(747..1658)
                     /locus_tag="VLM90_04660"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016208 - AMP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSQ12282.1"
                     /translation="MYSKILVPLDGSTAAESALPLVRSLARRLALPVELLGAIDLREI
                     SRSASAADGLFLDRLLEDEARRGAEYLAKIAPTLPGVQVTTRSEKGDAADVIIETAAV
                     DKNTLIVMATHGRSGLNRFLLGSIAEKVLRATANPLLLVKALEPIASQGEAALTSIVV
                     PLDGSDLAEGVLPTVEELAKKLDLEVVLIRAFAIPYGAYSTGDGFYDPVNLEAFLARL
                     REEASDYLERKAAHLKRNGVANVSFVAKEGLSADEIIKFARETPANLIAMSTHGRSGV
                     KRWVLGSVTETVVRHSGDPVLVLRAGT"
     gene            complement(1680..2585)
                     /locus_tag="VLM90_04665"
     CDS             complement(1680..2585)
                     /locus_tag="VLM90_04665"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016208 - AMP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSQ12283.1"
                     /translation="MYSKILVPLDGSKTAEKVLPYARHLAGKFKIPVELLAVLDIAEM
                     ATHISAERARHLDTMIEDGMRASTTYLRGIATTFPAGNVTCTVEKERAEEAIIGNAGA
                     DGGTLIAMATHGRSGMDRFLLGSVAEKVLRGSANPLVLVRANEEAKTSGEAPFKSIIV
                     PLDGSELAESVIPLAVTMAQKLDLEVVLFRAYHMPYNAYGGDDGYMVNYDELIDSVRD
                     EAKEYLDKKVAEVTKLGVAKVSALSKEGFAGDEIIALGHKTPDGLIAMCSHGRSGVKR
                     WVLGSVTENVVRHSDAPVLVVRAKQ"
     gene            complement(2648..3145)
                     /locus_tag="VLM90_04670"
     CDS             complement(2648..3145)
                     /locus_tag="VLM90_04670"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HSQ12284.1"
                     /translation="MAEKAKEKEAKAVTPWRPFMDLTRWERDMEHVFDDFMGRRMRPW
                     WPERWFPTGGTEIAAPALDVFEEKDDIVVKAELPGIDKENIEVNLTDHTLTIKGEKKK
                     EEEVKEENYYRCERSYGSFLRSVELPKEVHADKVKASFKNGILEVRVPKTEEAKSKEI
                     KVKVE"
     gene            3414..4304
                     /locus_tag="VLM90_04675"
     CDS             3414..4304
                     /locus_tag="VLM90_04675"
                     /inference="COORDINATES: protein motif:HMM:TIGR02175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HSQ12285.1"
                     /translation="MIEVRFHGRGGQGAKIASRILGHSAILAGLYAQDCALFGAERRG
                     APVVSFTRLSAEPIDRRGEIERPDLLIVLDAALLTEAPGQVYRGVHPTTPLVVNADPQ
                     RFTPATLAAADYHAFDMQRIAQEHIGRGVISAIAAAVATKQIAAIDVEQLAVAVRLEL
                     GDFGLAPDLIEKNLAAARMAYATTPIIALSRSPVEASDLSPSWQAVPYLGSAQYAGPT
                     IRHRGSAALRQTGSWRSERPVIELGKCKRCFLCYLYCPEAALRLDSDNFPHVDYDNCK
                     GCMICYEECPTDAITRRMES"
     gene            4301..>5086
                     /locus_tag="VLM90_04680"
     CDS             4301..>5086
                     /locus_tag="VLM90_04680"
                     /inference="COORDINATES: protein motif:HMM:NF013974.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12286.1"
                     /translation="MTRSILTGNAAAAWGARLAAVDYIPAFPITPQTEIVETLARWCR
                     SGEMAARLVMMDSEHSMLAAAAGAAATGVRVFTATSSQGLLYGFELLYVIAGLRLPLV
                     LVNVSRALAHPITLEPNHNDVLSARDSGFLQFHCETSQEVLDSILIAYRLAEDAKILL
                     PAIVNLDGFYLSFTRESVELPEAGEVNDFLPSFTPAYPVLSNPQPVALGAAVLDGSLY
                     SYFKHQMHHAGDNALGLYRSIAGEFAARFGRRHDIVEEFMLDDA"
BASE COUNT          972 a         1608 c         1430 g         1076 t
ORIGIN      
        1 acctttacca gcccagcctt agtgaggcca gtgcagcgct cttcaagata gtgctgcaca
       61 tcggtttcga tagcggcgct caaccgcggc aaatcgaccg cataggagcc gccgccttcg
      121 taatagctgg cgtagggaac gttgtaggaa cgaaagagaa ttacttcgag gtcgagttgt
      181 ttggcgacct cggcaaccga gggcaacacc tgttcggcga tactggaacc gtcgagagga
      241 acgatgatac aatcgagttt ctggactccg ttgatggctc cgccttcggc ggcgcgcacc
      301 agcagcagcg gattcgccgt cgcgcgcaag actttctccg cgacgctgcc gagcaaccaa
      361 cgttgcagcc cggagcggcc atgggtcgcc atgacgatga gactgttctt atcggtcgcc
      421 gcatgctcaa caatcgaatc ggcggccacg cctttcttga cttggcactc gaccgccacg
      481 ccggcaaagc tcttggccgt cgaagtcaaa tattcatgac ggcggcgcgt ctcaaaatcg
      541 tccaatgtat cgagaaacag tccgcgctca gtcgcgacat ggcgggcgat ctcctcaagg
      601 tcgatcgccg acaacaacgt aaccggcaag ttcaatcctt gcgccagcgc acggccatag
      661 ggcaaggcga tttccgcgac cggcgaacca tccaagggta agacaatctt gctaatcatc
      721 gccgccgtcc aattgggcgc taccgttcag gtgccggcgc gcagcaccaa caccggatcg
      781 ccggaatggc gcacaacagt ctcagtgaca ctaccgagca cccaacgctt gaccccagaa
      841 cggccatggg tcgacatggc gattagattg gccggcgtct cgcgggcgaa cttgatgatc
      901 tcatcggcgc tcagcccttc cttggcgacg aaggaaacat tggcgacacc attgcgcttg
      961 aggtgagcgg ctttcctttc gagataatcg gaggcttctt cgcgcagccg ggccaggaac
     1021 gcttcgagat tgaccggatc gtaaaatccg tcgccggtgc tataggcgcc gtaggggatg
     1081 gcgaaagcgc gaatcagaac cacttcgaga tcgagtttct tcgccaactc ctcgaccgtc
     1141 ggcagcacgc cttcagcgag atcagagccg tccaaaggca caacaatcga tgtcagcgca
     1201 gcttcgccct ggctagcgat gggctcgagc gctttgacca acagcagtgg attagccgtg
     1261 gcgcgcaaga ctttctcggc gatgctaccg aggagaaagc ggttcagtcc ggagcggccg
     1321 tgggtcgcca tgacgatgag ggtattttta tcgaccgccg cggtctcgat gatgacgtcg
     1381 gcggcatcgc ccttctcact ccgcgtcgtc acttgcaccc caggcagagt tggggcgatt
     1441 ttggccaaat actcggcgcc gcggcgcgct tcatcttcga gtagccggtc gagaaacagt
     1501 ccgtcggcag ccgacgcgct gcgggagatt tcgcgcaaat cgatggcgcc gagcagctct
     1561 acgggaagcg ccaatcggcg cgccaatgag cggaccagcg gcagcgcgct ttcagccgcc
     1621 gtcgaaccat ccaaagggac aagaatcttg ctatacacag tgtcgttcct tgcgccggct
     1681 cattgcttcg cccgcaccac cagcaccggg gcgtcgctat ggcgcacgac attttccgtc
     1741 acgcttccca gcacccaacg cttgacgccg gaccggccat gggaacacat ggcgatcaaa
     1801 ccgtccgggg tcttgtgccc gagagcgatg atttcatcgc cggcgaagcc ttctttgctg
     1861 agcgccgaca ccttggcgac accgagcttc gtcacctcgg cgaccttttt gtcgagatac
     1921 tccttggcct catcgcgcac gctgtcgatc agctcgtcat agttcaccat gtagccatcg
     1981 tcgccgccgt aagcgttgta cggcatgtgg taggcgcgga agagcaccac ttcgaggtcg
     2041 agcttctggg ccatggtcac ggccagcgga atcacgcttt cggcgagctc cgatccgtcc
     2101 agcggcacga tgatcgattt gaacggcgct tcaccgctgg tcttggcctc ttcgttggcg
     2161 cgcacgagca ccaaaggatt ggcgctgccg cgcagcactt tctcggcgac gctgcccaac
     2221 aggaagcggt ccattcccga tctgccgtga gtcgccatgg cgatcagcgt accgccgtcc
     2281 gcgccagcat tgccgatgat cgcttcttcg gcgcgctctt tttccaccgt gcaggtcacg
     2341 ttgcccgcag ggaaagtcgt ggcgatgccg cgcaaataag tggtgctggc acgcatgccg
     2401 tcttcgatca tggtatcgag atggcgcgcc ctttcagccg agatatgggt cgccatctcg
     2461 gcgatgtcga ggacggcaag cagctcgacg ggaatcttga acttacctgc caagtgacga
     2521 gcgtagggca ggactttttc tgccgtcttg gaaccatcca gcggtactag aattttgcta
     2581 tacatatatt tctcctcatc tcttctgcga tcgttggcga ctccctacgc tcgtcggccc
     2641 gcgccggcta ctcgactttc actttgatct ctttgctctt tgcctcttcg gtcttcggca
     2701 cgcgcacttc caagatgccg ttcttgaagg acgcttttac cttatcggca tgaacttcct
     2761 tgggcaactc cactgaacgg aggaaggagc cgtaggaacg ctcgcacctg tagtaattct
     2821 cttccttgac ctcttcttct tttttctttt cccctttgat ggtgagcgtg tgatccgtga
     2881 ggttgacctc aatgttctct ttgtcgattc cgggtagctc tgcttttacg acgatatcgt
     2941 ccttctcttc gaaaacatcc aacgccggcg cggcgatctc cgtcccgcca gtggggaacc
     3001 accgttcggg ccaccagggc cgcatgcgcc gccccatgaa atcatcgaac acatgctcca
     3061 tgtccctctc ccagcgggtg aggtccatga acggccgcca aggtgttacc gccttggctt
     3121 ctttctcttt tgctttttcc gccattgtca gtccctcctc tctatgaatt tgtaacgcct
     3181 accgataatc cattgccgca atcgacgtgc cagtcgatag ccgtgaaatt tatactctca
     3241 gtcggagaag tttcgcaagt ttgaaaaaat aacttacggt ttctcgcatc tctgcgaggg
     3301 gcttgccgat cactttcaac accgtgaaat ttcgcttgta gattggcgac acttacgaga
     3361 cctcaatggc acccatcttg cgcttttgca tctgcgacaa ggtcggtaag ccaatgatcg
     3421 aagtacgatt tcacggccgc ggcggccagg gcgccaagat cgccagccgc atactcggcc
     3481 acagcgccat tctcgccgga ctctacgccc aggactgcgc tttgttcggc gccgaacggc
     3541 gcggcgcgcc ggtggtttct tttacgcggc tcagtgctga accaatcgac cgacggggag
     3601 aaatcgagcg gccggatctg ctgatcgttt tggacgcggc gcttttgacg gaagcgcccg
     3661 gtcaggtgta tcgcggcgtc catccaacaa ccccgctcgt cgtcaatgcc gatccgcagc
     3721 ggttcactcc ggcaaccctc gccgccgccg actatcatgc cttcgacatg cagcgcatcg
     3781 cccaggaaca tatcggccga ggtgttatca gcgccatcgc cgccgctgtt gcgacaaaac
     3841 agattgccgc catcgatgtc gagcaattag ccgttgccgt gcgcctcgaa ctcggtgatt
     3901 tcggcttagc gcccgacctg atcgagaaaa acctggccgc ggcgcgcatg gcctacgcca
     3961 cgacaccgat catcgctctg tcgcgctcgc cggtcgaagc aagcgatctg tcaccgtcgt
     4021 ggcaagcggt cccttacttg ggctcggcgc agtacgccgg cccgacgatt cgccaccgcg
     4081 gcagtgccgc gctacgccag accggcagct ggcgcagcga acggccggtc atcgagcttg
     4141 gcaaatgcaa gcgctgcttt ctctgttacc tttactgccc cgaagcggcg ctgcgcttgg
     4201 acagcgacaa tttcccccat gtcgactacg acaactgtaa aggttgcatg atctgttacg
     4261 aggaatgtcc caccgacgcc atcacacgga ggatggaatc gtgacgcgtt ctatactaac
     4321 cggcaatgcc gcggccgcct ggggcgcccg tctcgccgcg gtagattata ttccggcgtt
     4381 tccgatcacg ccgcagaccg agatcgtcga gaccttggcg cgctggtgcc gcagcggcga
     4441 gatggcggca cgcttggtga tgatggattc ggagcattcc atgctcgcgg cagcggccgg
     4501 cgccgcggcc accggcgtgc gcgtgttcac ggcgacatcg agccaaggac tgctctacgg
     4561 ctttgaattg ctctacgtca tcgccggctt gcgcttgccg ctggtattgg tcaatgtctc
     4621 ccgcgccctg gcccatccga tcactctgga acccaatcac aacgatgtgc tctcggcgcg
     4681 ggacagcggt tttctccagt ttcactgtga gaccagccag gaagtgctcg actcgatcct
     4741 gatcgcctac cgtttggcgg aagatgccaa aatcctcctg ccggcgatcg tcaatcttga
     4801 cggcttctat ctgtcgttca cgcgcgaatc ggtggagctg ccggaagccg gcgaagtgaa
     4861 cgatttcctg cccagcttca cgccggcata tccggttcta tccaacccgc aacccgtcgc
     4921 ccttggcgct gcggtgctgg acggaagcct gtacagctac ttcaaacacc agatgcacca
     4981 tgccggcgac aatgcgctgg gactttatcg cagcatcgcc ggcgagttcg ccgcccggtt
     5041 cggccggcgc catgacatcg tcgaagagtt catgctcgat gacgcc
//
LOCUS       DATIRS010000373         2027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_914028, whole genome shotgun sequence.
ACCESSION   DATIRS010000373 DATIRS010000000
VERSION     DATIRS010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2027
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_914028"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(57..923)
                     /locus_tag="VLM90_04685"
     CDS             complement(57..923)
                     /locus_tag="VLM90_04685"
                     /inference="COORDINATES: protein motif:HMM:NF016424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HSQ12287.1"
                     /translation="MTAVALALLLQLAFVAPATAVDLPPLKTTISDFAGMFPPASLDD
                     LEHRLHRFATETATHVAILTVKTLDGATIEALAQQAFNRLPLSDNERNKTVLLVIARA
                     EQEVGFHAGAPLQHLLPQPATNEKLREQVTLYINGLRPDLGIHGAVHYLFRALRGDVR
                     VGSQSADENLEEMSLRGRGAGAIFALFIGPFLAFFVGGLWGVYATQYGVQRWPRLAMG
                     AIFGGGTAKIVITFTAFIGGSSDSLWYFIMALAIPLGVFGSCTEFWMSGDWRGIPREK
                     GPRRKPEDNMGI"
     gene            complement(920..1699)
                     /locus_tag="VLM90_04690"
     CDS             complement(920..1699)
                     /locus_tag="VLM90_04690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12288.1"
                     /translation="MTDYVKQLTRLAKAYAAAERAVIAAFFKKPRQRTDHIRWLKAQG
                     FKEYSAIRPIIDALAALYPKIDRGVDRHDYAELTEKLADETKHARLVLDLLEEISGKK
                     TGPHDLTWLPEDRKLAKVRARYSKSYATLLHGSGKVSSKEIKRRDEDLERAAITLTEG
                     GGGALYWVCSKLKKTGIEAKIAQAFHEILLDEVEHKDSGARSLNEHIKNDADCKRAAE
                     IICAVCGQRLRMRNEQFGFPLNKIQLAALDRRAQAALDGAK"
BASE COUNT          404 a          574 c          622 g          427 t
ORIGIN      
        1 atgccttgtt tattgaaggc agcgaaacgg ccggggcgat catgcgccgc cgacgttcat
       61 atgcccatgt tgtcttcagg ttttcgccgc ggcccttttt cccgcgggat gccgcgccag
      121 tctcccgaca tccagaattc cgtgcagctg ccgaagacgc cgagtggaat cgccaaggcc
      181 atgatgaaat accaaagtga gtcgctggag ccaccgataa atgccgtgaa ggttatgacg
      241 attttcgccg ttccgccgcc aaaaatcgcg cccatggcga gccggggcca gcgctgcacg
      301 ccgtactgag tcgcgtagac gccccagaga ccgccgacaa agaaagccaa gaagggtccg
      361 ataaacagcg caaagatcgc ccccgcgccg cggccgcgca gcgacatctc ttcgagattc
      421 tcatcggcgc tctgactgcc gacgcgcacg tcgccgcgca gggcgcggaa cagatagtgc
      481 accgcgccat ggatgccgag gtcgggtcgg agaccgttga tgtagagtgt cacctgctcg
      541 cgcagtttct cgttggtcgc cggctgcggc agcaaatgct gcaacggcgc gccggcatga
      601 aaaccgactt cctgctcggc gcgggcaatg actaacagca cggtcttatt gcgctcgtta
      661 tcgctcaacg gcaaacggtt gaaggcttgc tgcgccagcg cttcgatcgt ggcgccatcg
      721 agggttttga cggtcaaaat cgcgacatgg gtagcggtct ccgtggcgaa ccggtgcagg
      781 cgatgttcga ggtcgtcgag gctagctggc ggaaacatgc cggcgaaatc gctgatggtg
      841 gttttgagcg gcggcagatc gacggccgtc gcgggcgcga caaaagccaa ttgcagcagc
      901 aaagcgagag cgacagcggt catttcgcac cgtcgagggc ggcttgggcg cgccggtcca
      961 atgccgccag ctgaatcttg tttaacggga agccgaactg ctcgttgcgc atgcgcagac
     1021 gctggccgca tacggcacaa ataatctcgg cggcgcgttt gcagtcggcg tcattcttga
     1081 tgtgctcgtt gagggagcgg gcgccgctat ctttatgctc gacttcgtcg agcaggattt
     1141 catggaacgc ctgggcgatc ttggcttcga tgccggtctt tttaagtttg ctgcaaaccc
     1201 aatagagcgc gccgccgccg ccctcggtga gcgtgatggc cgcgcgctcg agatcttcgt
     1261 cacggcgctt gatttctttc gaactgactt ttcccgagcc atgcaacagg gtggcatagc
     1321 tcttagagta tctagcgcgc accttggcga gcttgcgatc ctccggcagc caggtgagat
     1381 catggggccc ggtctttttg ccgctgatct cctccagcag atccagcacc aagcgcgcgt
     1441 gtttggtctc gtcggcgagt ttctcggtca gctcggcgta gtcatgccgg tcgacgccgc
     1501 gatcgatttt cgggtagagc gccgccaagg catcgatgat cggcctgatc gccgagtatt
     1561 ctttgaaccc ctgggctttg agccagcgga tgtggtcggt gcgctggcgc ggtttcttga
     1621 aaaatgcagc gatcacggcg cgttccgcgg cggcgtaggc cttggcgagt cgcgtcagct
     1681 gtttaacgta gtcagtcatc ggataggcgt gaaggttgag gagctgactt tggcgtcaat
     1741 atgcaatcaa ttgtttcacc acgaagttcc cagcgcggca cagccgcaac cgaaactcgg
     1801 aatatgtctc gcaaagacgc aaaggccgca aagttcggag ggaagagatg aattatcttg
     1861 aagaatttat gcaccgttat tttccgaact ttgcggcctt tgcgtcttgg cgagagatac
     1921 tccgagttcc agttgcggct gaaccgagct aggccttcgt ggtgaaaaca tcttcacaat
     1981 aaacccggaa gaagcggatt ttccatggat ccaactattg acacaat
//
LOCUS       DATIRS010000374         1506 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_422778, whole genome shotgun sequence.
ACCESSION   DATIRS010000374 DATIRS010000000
VERSION     DATIRS010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_422778"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            265..543
                     /locus_tag="VLM90_04695"
     CDS             265..543
                     /locus_tag="VLM90_04695"
                     /inference="COORDINATES: protein motif:HMM:NF011430.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HSQ12289.1"
                     /translation="MFGIGMPELLMILGLALIVLGPKKLPELAKTLGKGLAEFRRATD
                     ELKDEFRKVEADLDEPPPPAEPLPIDPQPAQSADTPQTDVNPNATEKK"
     gene            540..1313
                     /gene="tatC"
                     /locus_tag="VLM90_04700"
     CDS             540..1313
                     /gene="tatC"
                     /locus_tag="VLM90_04700"
                     /inference="COORDINATES: protein motif:HMM:TIGR00945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HSQ12290.1"
                     /translation="MTTPDGNGQHTDVQMPFTSHLGELRSRLIKSVLAVAVAFFGCFY
                     FVDTIFALLAAPVRRLNIPGLTLIGTGVTEAFFTRMKLGFAAALVVALPVLLWQGWQF
                     VATGLYEHEKRYTRSFVFAGSLCFCLGAAFCYAIVVQHGLSFLLHRYEVIGVKPMLQI
                     GDYLSTISRLVLASGAMFELPVIAFFTARVGLIDHRFLIRHSRYALIAIALLAAILTP
                     PDLISQILLMVPLMLLYALSIAIAYLARFRMNRLDRAAE"
BASE COUNT          284 a          468 c          400 g          354 t
ORIGIN      
        1 gtgtcaaacc cgccacgaca gttcgaaaaa ctttttgagc cctttgcgtc ccgaccgccc
       61 tgagcttagc ctgacctgag ctgagtcgaa gggtgccgct aattttccgc ttccaaatct
      121 gcttacattg cttctctgcc gcgctctgca acggtcattt cgagcgcagc gagaaatccc
      181 gtctcgctcc gcgcaaccag gctaaacaag cgttaaccgt cgcgcaatct tgcggagccg
      241 aatgaaatcg cttagcttag ctgcatgttt ggtatcggca tgccggaatt gctcatgatc
      301 ttggggttgg ctttgatcgt ccttggcccc aagaaactgc cggaactcgc caagaccttg
      361 ggcaaaggtt tagccgagtt tcgccgcgcc accgatgagc tcaaggatga atttcgcaaa
      421 gtggaggccg atcttgacga gccgccaccg ccggccgagc cgctgcccat cgatccccaa
      481 cctgcgcaat ccgccgacac gccgcagacc gacgtcaatc ccaacgccac cgagaaaaag
      541 tgaccacgcc agacggcaac ggacagcaca ccgatgtcca aatgcccttt acctcccatc
      601 tgggggagtt gcgctcacgg ctgatcaagt cggtactcgc cgtcgccgtc gcgttcttcg
      661 gctgctttta tttcgttgac acgattttcg cgttactcgc cgcgcccgtg cggcgtctca
      721 atatcccagg gctgacactc atcggcaccg gcgttacgga agcgttcttt accaggatga
      781 aactcggctt cgccgcggcg ctggttgtcg ctctaccggt gctcttgtgg cagggctggc
      841 aattcgtcgc caccggcctc tatgaacatg agaagcgcta tacgcgaagt ttcgtcttcg
      901 ccggttcgct gtgcttttgc ctcggtgcgg ctttctgcta tgccatcgtc gtgcaacatg
      961 gtttgagctt tctactgcat cgctatgagg tcatcggcgt caagccgatg ctccaaatcg
     1021 gtgactacct ttcgacgatc tcccgcctgg ttttggcctc cggcgccatg ttcgagctgc
     1081 cggtgatcgc gtttttcacc gcgcgggtgg gcctgatcga ccatcgcttc ttgatccgcc
     1141 acagccgtta cgcactgatc gccatcgcgc tcttggcggc gatcctgacg ccgcccgatt
     1201 tgatctcgca aatcttgctg atggtgccgc tcatgctgct ttacgccttg agcatcgcca
     1261 tcgcctacct cgcgcgcttc cggatgaacc ggttagaccg agccgccgaa tgaaaaaaaa
     1321 ggcgtccgcc aaagctaacg ccgccaattt ttgaattcga gaatgaaacc ttagttatcg
     1381 tcgttgatga acgcgcaggc ggcaaacacc gtggtccaca gaccgtcttt gttgccgatg
     1441 gcggactggg tgatattgga agtgcggacg attttctcgg acattttgaa cagctgctcg
     1501 cgctcg
//
LOCUS       DATIRS010000375         1626 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1307513, whole genome shotgun sequence.
ACCESSION   DATIRS010000375 DATIRS010000000
VERSION     DATIRS010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1626)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1626)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1626
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1307513"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(76..>1626)
                     /locus_tag="VLM90_04705"
     CDS             complement(76..>1626)
                     /locus_tag="VLM90_04705"
                     /inference="COORDINATES: protein motif:HMM:NF013799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HSQ12291.1"
                     /translation="LRPIVPGARALIFAFDGVGAEALYSAIRDGHCPHIKNLLGGDRG
                     AGVFEHGYAISDAMSILPSTTMAAWSSIFTGQPPAFTGVTGNEWFVREEMRLYAPAPV
                     SVTDIADTARMLADGLVGNAIRVPTLYELLDRRAHVALAPVQRGADLFTITDASILAD
                     LVGAVAKGTLGNTTIKQEVYQDLDKNSVDALLEAIDKYGVPNLQVAYFPGIDLYSHIA
                     EAPLDIQQIYLENTLDPAIGRVLEVYQRAGVLDQTYVLFVADHGHTPVINDDHHSLYT
                     TGDHEPPALLDQLGFRVRPFVLEPEPSENNYNAALAYQGAMAYIYLADRTAILPNGFY
                     DWRRAPRFEEDVMAVVRAFDRVNRTGEPISQLKGVLDLIFARVPRPVGEDALPFEIFD
                     GKQLVAIGDYLKRHPRPDLIRLESRMRGLSAGPYGHRAGDVLLLCRSGLELPIEERFY
                     FSGLYRSWHGSPTRQDSHVPIIVARQNSSGPELARQTQGIVGAEPSQLDIVPLVLHLL
                     RDSEKRQE"
BASE COUNT          361 a          473 c          478 g          314 t
ORIGIN      
        1 tcacggctcg gctgggcgaa gccagaaata ttcggacgct cggctctgaa tccaaaccgt
       61 gaattcagta aatcattatt cttgccgctt ctctgaatcg cgcagcagat gcagcactag
      121 cggcacgata tctaactgcg acggctcggc gccgacgatc ccttgggttt ggcgcgccag
      181 ctctggtccg ctgctatttt gccgcgcgac gatgatcggc acatggctat cctggcgcgt
      241 tggactacca tgccaagagc ggtatagacc ggagaagtaa aaacgctctt caatcggcag
      301 ctccaaaccc gatcggcaaa ggagcaagac atcgccggcg cgatggccat agggtcccgc
      361 cgacaggccg cgcatccgcg actctagccg gatcaaatcg ggacgcggat gacgctttaa
      421 ataatcgccg atggcgacca actgcttgcc atcaaatatt tcaaacggca gggcgtcttc
      481 gcccacgggg cgcggcactc gcgcaaaaat cagatcgagg acgcctttga gttggctgat
      541 tggttctccg gtgcggttca cccggtcgaa agcgcgaacc acggccatga cgtcttcctc
      601 aaagcgcggc gcccgccgcc aatcgtaaaa accattcggc aaaatcgccg tgcggtcggc
      661 aaggtagatg tacgccatgg cgccctggta ggcgagcgcg gcattataat tgttttcgct
      721 cggctcgggc tcgagcacga aggggcgcac acggaagccc agctggtcga gcagcgccgg
      781 aggctcatga tcgccggtgg tgtaaagcga atgatggtcg tcgtttatta ccggcgtgtg
      841 gccgtggtcc gcgacgaaca aaacatatgt ttggtcaagc acgccggcgc gctgatagac
      901 ttcgagcacg cgtccgatcg ccggatcgag agtgttttcc aggtaaatct gctggatgtc
      961 gaggggggct tcggcgatat ggctgtacag atcgatgccc gggaaatagg cgacctgaag
     1021 attcggcacg ccgtatttat caatcgcttc aagcagcgcg tcgaccgagt ttttatccag
     1081 atcctgatag acttcttgct tgatcgtggt gttgccgagg gtccctttgg ctactgcacc
     1141 gactaaatcc gcgagaatgc tggcatcagt aatggtgaat aggtccgcgc cccgctgcac
     1201 gggagccagg gcaacatgag cgcgccggtc gagcagttcg taaagagtcg gcacgcggat
     1261 cgcgttgccg accaaaccgt cggccagcat tcttgccgta tcggcgatat cagtcaccga
     1321 taccggcgcc ggcgcgtaaa gacgcatttc ctcgcgcaca aaccactcat ttcccgtcac
     1381 gccggtaaag gcaggcggtt ggccggtaaa gattgaggac catgcagcca tcgtcgttga
     1441 cggcaaaata ctcatagcat ccgaaatcgc atagccatgc tcgaaaacac cggcgccgcg
     1501 atcgccaccg agaagatttt ttatatgcgg acaatggccg tcccgaatag cgctgtaaag
     1561 cgcttccgcg ccgacgccgt caaaagcgaa gatgagcgcc cgcgctcccg gcacaatcgg
     1621 ccgaag
//
LOCUS       DATIRS010000376         2037 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_717922, whole genome shotgun sequence.
ACCESSION   DATIRS010000376 DATIRS010000000
VERSION     DATIRS010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2037
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_717922"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..729
                     /locus_tag="VLM90_04710"
     CDS             <1..729
                     /locus_tag="VLM90_04710"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSQ12292.1"
                     /translation="PQVQFGARITGLITNTFILAGIAAIAAVVVAMLLAYAARTVKSP
                     LVQAANRLAVLGYALPGAVIAVGILLPLGKLDNALIAWIHQQFGVRPGLILTGSVTAL
                     IYAYLVRFLAVAFQTAEAGLTRVTPSMDDAARSLGLSPGRTLVRVHMPIMRSSIATAA
                     LLVFVDVMKELPATFAMRPFNFDTLAVEAYNLAKDERIAEAALPALLMVAIALLPLIL
                     LSRQIANSSQRRRSDTVRSQVSAV"
     gene            857..>2037
                     /locus_tag="VLM90_04715"
     CDS             857..>2037
                     /locus_tag="VLM90_04715"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HSQ12293.1"
                     /translation="MASFSATSSTRVMGSRLFLFLGLIILTATGAFAAGDEAKRILAL
                     IDYIGGDYRNAVQGGKVVNAEEYTEMSEFSTRSLELFCQLKSAEGDKAGIEKDLQALT
                     SHIQLKTGDDAVPQLAQQIKDRLIKTYSIVTYPKALPSYEGAKLIYMQNCAQCHGESG
                     RGDGPGRESMNPKTPPPANFTDADFMGGLSPFKVYNTTTFGIDKTAMASFAALPDEQR
                     WQVAFYVMALRFPAETAAAGESWLKGKSLPANLAAVATLATSSDNELSDKIKTSFPNA
                     PNNEILAHLRRGLLDKKSTDPLLIARTLLGEAAEIYSKGDKEKAYQKAIEAYLDGFEM
                     AEPALFAKDAALGRSLEAQFTQFRNSIRQGVSAAEIQKQRAEIEARLDQAAQMLASSD
                     D"
BASE COUNT          454 a          615 c          576 g          392 t
ORIGIN      
        1 ccgcaggtgc aatttggcgc tcgcatcacc gggctgatta ccaatacgtt tattttagct
       61 ggcatcgccg cgattgccgc cgtcgtcgtc gccatgctgc tggcttacgc ggcacgaaca
      121 gtgaagagtc cgctggtaca agcagcgaat cgcctggctg tactcggcta tgccctgccg
      181 ggcgcggtaa tcgctgtggg cattctgctc ccgctgggca agctggacaa cgcattgatc
      241 gcctggattc accaacaatt cggcgtgcgc cccggactga tcctcaccgg ctcggtcacg
      301 gcgctcatct acgcctacct ggtaaggttt cttgccgtgg cgtttcaaac ggcggaagcc
      361 gggcttacaa gggtgacacc gtccatggat gatgccgcgc gcagcctcgg cctgtcaccc
      421 ggccgcaccc tggtgcgggt gcacatgccg atcatgcgca gcagcatcgc caccgcagcg
      481 ctgctcgtgt tcgtcgacgt catgaaagaa ttaccggcga ccttcgccat gcggccgttt
      541 aatttcgaca cactggcggt cgaggcctac aacttggcaa aggacgagcg cattgccgaa
      601 gccgccctgc cggcgctgct aatggtcgcc atcgcgctat tgccgctgat tttactgtcg
      661 cgccagatcg ccaattcgag ccaacgtcgg cggagcgaca cggttcggag tcaggtttcg
      721 gctgtgtagc tgagccgtcc ttgcgggaga agagcgaacc cgtgtacggc tcggggcagg
      781 cgcaaagagt cgacctgaaa tgttattgga caaaagaatt tttgataaag ttcggctcct
      841 tacatatacg accactatgg cttcattctc cgcgaccagc tcgacacgag tcatgggcag
      901 tcggctcttc ctcttccttg ggctgatcat tctaacggcg accggcgcat tcgctgccgg
      961 tgacgaagcc aagcgaattc tggcactcat cgattacatc ggcggcgact atcgcaacgc
     1021 cgtgcaaggc gggaaagtcg tcaacgccga agagtacacg gagatgagcg agttctcgac
     1081 gcgcagcttg gagctgttct gccaactcaa gtctgccgaa ggcgataaag cgggcatcga
     1141 aaaagatctg caagcgctaa ccagccacat acaactgaaa accggcgacg atgcggtgcc
     1201 gcagttggcc cagcagatca aggaccgctt gatcaaaacc tatagcatcg tcacctaccc
     1261 caaggctctg ccgagctacg agggcgcgaa actgatctac atgcagaatt gcgcgcagtg
     1321 ccatggcgag agcggccgag gcgacggccc cggccgcgag tcgatgaatc caaaaacacc
     1381 gccgccggcc aattttaccg acgcagactt catgggcgga ctctcgcctt ttaaagtcta
     1441 taacacgacc acgttcggca tcgacaaaac ggcgatggct tccttcgccg cgttgccgga
     1501 cgagcaacgc tggcaagtcg ccttctatgt tatggcgcta cgttttcccg cagaaacagc
     1561 agctgccgga gagtcctggc tgaaaggcaa gtcgctgccg gccaacctcg cggccgtcgc
     1621 gaccttggca acttcttcag acaacgagct atcagataaa atcaagacga gttttcccaa
     1681 cgcgccgaac aacgaaattc tcgcccacct cagacgcggg cttctagaca aaaaatcgac
     1741 cgatccattg ttgatcgctc gcaccctgct cggcgaagcc gctgaaatat atagcaaagg
     1801 ggacaaggaa aaagcttacc aaaaggccat tgaggcctac cttgacggct tcgagatggc
     1861 cgagccggcg ctgttcgcca aggatgcggc cttgggaaga tctctcgagg cccagttcac
     1921 gcagtttcgc aattcgattc ggcagggagt ttccgccgcg gagattcaaa aacaacgcgc
     1981 cgaaatcgaa gccaggctcg accaggcggc acagatgctg gccagcagcg atgattt
//
LOCUS       DATIRS010000377         5571 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1307603, whole genome shotgun sequence.
ACCESSION   DATIRS010000377 DATIRS010000000
VERSION     DATIRS010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 5571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5571
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1307603"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1129)
                     /locus_tag="VLM90_04720"
     CDS             complement(<1..1129)
                     /locus_tag="VLM90_04720"
                     /inference="COORDINATES: protein motif:HMM:NF012350.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HSQ12294.1"
                     /translation="MTSQSNDIPPSGLSTQEVEERLRLHGYNELPSSNRRGTFAIALS
                     VAREPMFSLLIAASIIYLTLGDLREALILAASILVIMAITIFQERKTERALEALRDFS
                     SPRALVIRDGEQKRIAGREVVPDDILLLTEGDRVPADAIVLSCNDLAVDESLLTGESV
                     PVRKAAWDGKQEIARPGGDDLPFVYSGTMLVQGRGVARVHATGARSEIGKIGKALQTL
                     ETDETFLQKKSARLIRNLAAVGLSLCALAVILYGLTRGNWMQGLLVGIALAMALLPEE
                     IPVVLTVFLALGAWRMSQKRVLTRRMPAIETLGSATVLCVDKTGTLTLNRMSVGKLFA
                     GGDFYEVDTTQDKPLPQKFHELVRFSVLTSETDPFDPMEKAF"
     gene            complement(1162..3858)
                     /locus_tag="VLM90_04725"
     CDS             complement(1162..3858)
                     /locus_tag="VLM90_04725"
                     /EC_number="7.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015662 - P-type ion transporter activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0019829 - ATPase-coupled monoatomic cation
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation-translocating P-type ATPase"
                     /protein_id="HSQ12295.1"
                     /translation="MSQWYQLSTDDVLRQLGSDANHGLSVAESRRRSLEYGPNELQAG
                     HRVTAWTILLEQFKNVLIIILLVAVTLSAFLGHAIEAGAIAIIVLFAVLLGFYQEYRA
                     ERAIDALRQMAAPTATVVRDGRECEIPARDLVPGDIVVLHTGNKVPADARMILALNLR
                     ADEAALTGESVPVEKQSEPLEAGELPVGDRRNMVFAGTAVTYGRGRAVVVATGMATEF
                     GNIAQLLETVQTGKTPLQNNLDKVGRILAQAALAMVVMIVALGLLRGQPLLEMFIFGI
                     ALAVAVVPEALPAVVTISLALGVQQMVKRNALVRRLPAVETLGSVSIICSDKTGTLTK
                     DEMTVRKIFVAGQMLEVSGTGYQPTGAFSLGGATIEPAKPLMTLLTAATLASDVQMLP
                     NETSGDSSAASSQGWQIKGDPTEGALVVAAAKAGFDKTELDKRFPRVHEIPFTSESKR
                     MTTLHAAGKVVTAYAKGAPEIILASCTRQLSEIGESELDGPTRELILAASQKMAGDAL
                     RVLAIACKPNATPEDAEQGMIFLGLAGMIDPPRPEAKTSIEKCRQAGIKAVMITGDHP
                     LTAQAIARELGVLKNGRAITGAELAAMSDVELAAEVENIEVYARVSPADKLRVVTALQ
                     ANRHIVAMTGDGVNDAPALKKADIGIAMGITGTDVSKEAAAMTLLDDNFASIVAAVEE
                     GRGVFDNIKKYLMFLISSNIGEIGLMIGATLLGLPLPLSAVQILYVNLATDGLPALAL
                     AVDPRESDLMQRPPRNPQSGIFTRPVVTLMVVGGLWSAIINLGIFTWALSARVDVTEA
                     MTMTFVSLVLIQFLKAYSFRSERHSVLIQPLANKWLNRAIAWEIALLVVVVYAPILQQ
                     PFATFSLPPMDWVIVLGGAASIVPVLELAKWMERRGWFGEMT"
     gene            complement(3855..5180)
                     /locus_tag="VLM90_04730"
     CDS             complement(3855..5180)
                     /locus_tag="VLM90_04730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic 2,3-diphosphoglycerate synthase"
                     /protein_id="HSQ12296.1"
                     /translation="MGAAGRDFHNFNVCFRADARVEVMAFTAAQIPGIAGRRYPADLA
                     GALYPNGMPIYPEDDLDKLLRDLRIEQVVFAYSDLSHVAVMHLASRVLACGADFQLIG
                     PERSSLRSSRPVISVCAVRTGCGKDSVIRRIAAILKQRKLNPVVVRHPMPYGDLSAQA
                     VQRFASVEDCDRHNCTIEEREEYEQHIKEGVAVFAGVDYVAILAAAEKESDVILWDGG
                     NNDWPFFRSDLEIVVLDPHRAGHELLYHPGETNFRRAHVLIVNKIDSAPVAGVEQVMA
                     NIAAINPRATVIQARSNITVDKPELIAGKRVLVVEDGPTLTHGEMSYGSGTIAAHKHG
                     AAEIVDPRPSARGSLAETFKHFPLVGRALPAMGYSQSQLDDLAATIACTPCDSIVVAT
                     PVDLARLIRLPKPHCRVRYDLAEISHPDLSEILTSFLGARIDLSSHREP"
BASE COUNT         1147 a         1611 c         1663 g         1150 t
ORIGIN      
        1 tgaaagcttt ttccatcggg tcgaatggat cggtctcgct ggtgagaacc gagaaacgca
       61 ccagctcgtg aaacttctga ggcaatggtt tgtcctgggt cgtgtccacc tcatagaaat
      121 ccccaccggc aaagagtttg cccaccgaca tgcggttgag agtcagcgtg ccggtcttgt
      181 cgacgcacag aacggttgcc gaaccgagag tttcgatggc cggcatgcgc cgggtgagaa
      241 cccgtttctg cgacatgcgc caagcgccga gggcgagaaa aaccgtgagc acgacgggaa
      301 tttcttcagg gagcagagcc atggcgagag cgatgccgac cagcaatcct tgcatccagt
      361 tgccccgcgt caatccatag agaatcaccg ccaaggcgca cagcgagagc cccaccgcgg
      421 ctagattacg gatcagcctg gcggacttct tttgcaggaa tgtctcgtcg gtttccagcg
      481 tttgcagcgc cttgccgatt ttaccaattt cgcttcgcgc gccggtggca tgaaccctgg
      541 cgacgccgcg gccctggacg agcatcgtgc cggaatagac gaagggtaaa tcatcgccgc
      601 cggggcgagc gatttcctgt ttgccgtccc atgccgcctt gcgcaccggc acagattccc
      661 ccgtcagtaa ggattcgtcc accgcgaggt cgttacaaga caaaacgatg gcgtcagcgg
      721 gaacgcgatc gccctcggtg agcagcaaaa tatcgtcggg aacgacctcg cgcccggcga
      781 tgcgtttctg ttcgccgtcg cggatgacga gcgcgcgcgg actggaaaaa tctcgcagcg
      841 cctccagcgc ccgctcggtt ttgcgctctt gaaatatcgt gatcgccatg atgaccaaga
      901 ttgaagcggc gagaatgagc gcttctcgca agtcgccgag agtcaaatag ataatgctgg
      961 cggcgatgag cagtgaaaac atcggctcgc gcgcaacgct aagcgcaatg gcgaaggtgc
     1021 cgcggcggtt ggaggaggga agttcgttgt aaccgtggag ccgcagtcgc tcctcgactt
     1081 cttgggtcga aagtccgctg ggcgggatat cgttagactg gctagtcatc gttgcacgcg
     1141 cagggtttgc gccaatctgg tttaggtcat ttccccgaac caaccgcgcc gttccatcca
     1201 tttggccagt tccaatactg gcacgatgct agctgctcca cctaagacga tgacccagtc
     1261 catcggcggc aagctaaagg tcgcgaaggg ttgttggaga attggcgcgt aaaccactac
     1321 aaccagcagc gcgatctccc atgcgatggc ccggttcaac cacttattgg ccaacggctg
     1381 gatcaacacc gaatgacgct cggagcgaaa actataggct ttgagaaatt ggatgagcac
     1441 gagagacacg aaggtcatgg tcatcgcttc agtgacatcg acccgtgcag acaatgccca
     1501 ggtaaatatc cccaggttga tgatcgccga ccataaaccg ccaacgacca tcaatgtgac
     1561 tacgggccgg gtgaagatgc cgctttgcgg gttgcgcggc ggccgctgca tcaaatcgct
     1621 ctcgcgcgga tcgacggcga gggccaatgc cgggagtccg tcggtggcca agttaacgta
     1681 aaggatttgc acggcgctga gcggcagcgg caggccgagc aaggttgcgc cgatcatcag
     1741 gccgatctcg ccgatgttgg aagatatcag gaacatcaaa tatttcttga tattgtcaaa
     1801 gacgccccgt ccctcttcca cggcggcaac gatggaagca aagttgtcgt cgaggagggt
     1861 catggcggct gcctctttgc tcacatctgt gccggtgatt cccatggcaa tgccgatgtc
     1921 ggctttcttg agcgcggggg cgtcgttgac gccgtcgcct gtcatggcga cgatgtgccg
     1981 gttcgcttgc agggcagtga ccacgcgaag tttgtcggcg ggcgagaccc gggcgtatac
     2041 ctcgatgttt tccacctcag cggccaattc aacatcactc attgcggcca attcggcgcc
     2101 agtgattgca cgaccattct taagcacgcc aagttcccgg gcgatggctt gcgccgtcag
     2161 gggatgatcg ccggtgatca tcacggcttt gatgccggct tggcggcatt tctcgatcga
     2221 agtcttcgcc tccggacggg gtgggtcgat catgccagct aagccgagga agatcatgcc
     2281 ctgttcggcg tcttccggcg tcgcattggg tttgcaggca atcgccaata cccgcagcgc
     2341 gtcgccggcc attttctggg aggcggctag aataagctcc ctggtaggac catccaattc
     2401 gctttcaccg atctcactaa gctgtctagt gcaggaggcc aggataattt cgggtgcgcc
     2461 tttggcatag gcggtgacga ctttgccggc ggcgtgcaag gtggtcatgc gtttactctc
     2521 ggaagtgaat gggatctcat gcactcgggg aaaccgctta tcgagttccg ttttgtcgaa
     2581 ccccgccttg gccgcggcga ccaccagcgc gccctcggtg ggatcgcctt tgatctgcca
     2641 accttgcgat gaagctgcgc tggaatcccc gctagtttcg tttggcagca tttgaacatc
     2701 ggatgcgagt gtggcggcag tgagtagagt cattagaggt ttggcgggtt caatcgtcgc
     2761 cccgcccaac gagaaagcgc ctgtgggttg atagccggta ccggagacct caagcatttg
     2821 cccggcgaca aagatcttgc gcacggtcat ctcgtctttg gtcaaagtgc cggtcttatc
     2881 cgagcagatg atcgacacgc ttcccaaagt ctcgaccgcg ggcagccggc ggaccagggc
     2941 gttgcgtttg accatttgtt gcacgccgag ggcgagagaa atagtgacaa cggcggggag
     3001 cgcctcgggg accacggcaa ccgcgagcgc gataccgaag atgaacattt cgagcagagg
     3061 ttggccgcgc agtagaccga gggcaacgat catcactacc atcgcgagcg cagcctgggc
     3121 gagaatgcgc ccgactttat ccaagttgtt ttgcagcggt gtcttgccgg tctggacggt
     3181 ctcgagcagc tgcgcgatat tgccaaactc agtggccatg ccggtcgcga cgacgacggc
     3241 gcgcccgcgc ccgtaggtaa ccgcggtgcc cgcaaaaacc atgttgcgcc ggtcgcccac
     3301 cggcagttcg cccgcttcga gaggctcgct ttgtttctcc accgggacgg attcaccggt
     3361 aagcgccgcc tcgtccgccc gtagattcag agccaggatc atccgggcgt cagcgggaac
     3421 tttgttgccg gtatgcaaaa ccacaatgtc tcccggcacc agatcgcgcg ccgggatttc
     3481 gcattcgcgg ccgtctctca ctaccgttgc ggtgggcgcg gccatctggc gcagcgcgtc
     3541 aatcgcacgc tcggcgcggt attcttgata aaaacccagc aggacagcga agagcacgat
     3601 gatcgcgatg gcgccggcct cgatggcgtg gccgaggaat gccgaaagtg tcacggcgac
     3661 gagcaggata atgatcaaaa cgtttttgaa ctgttccagg agaattgtcc acgctgtgac
     3721 ccgatgaccg gcctgcagct cattgggccc gtactccagc gaacggcgcc gcgactcagc
     3781 cacgctgagg ccatggttgg catcgctgcc taactggcgc aagacgtcat cggttgataa
     3841 ttgataccac tgactcatgg ttcacgatgg cttgagagat cgatgcgcgc gcctagaaaa
     3901 ctcgtcaata tttcactcaa gtcgggatgg ctgatttctg ccaaatcata gcgcacgcgg
     3961 cagtgcggtt tgggtaatct aatcagccgg gccaaatcca ccggcgtggc gacgacgata
     4021 ctgtcgcaag gtgtgcacgc gatcgttgcc gcgagatcgt ccagttgaga ttgagaatac
     4081 cccatcgctg gcaacgctcg gccgaccagg ggaaagtgtt tgaaggtttc ggccaaactg
     4141 ccgcgcgcgc taggtctcgg gtcgacgatt tccgccgcgc cgtgtttgtg ggcggcgatg
     4201 gttcccgaac cgtagctcat ttcgccgtgt gtcagcgtcg ggccgtcttc gacaaccaac
     4261 acgcgtttgc cggcgatcag ctccggttta tcgaccgtga tgttcgagcg cgcttggatc
     4321 accgtcgcgc gtggattgat cgccgcgata ttggccatca cttgctcgac tccggccact
     4381 ggcgcggaat cgatcttgtt gacgatcaac acatgggcgc ggcgaaaatt ggtctcgccg
     4441 ggatgataga gcagctcatg gccggcgcgg tgcggatcga ggacgacgat ttccagatcg
     4501 gagcgaaaaa acggccagtc attattgccg ccgtcccaga gaattacatc agattctttc
     4561 tcggcggctg cgagaatggc cacgtaatcg acgccggcaa ataccgcaac gccttccttt
     4621 atatgctgtt cgtattcttc gcgctcttcg atcgtgcagt tgtggcggtc gcagtcttcc
     4681 accgaggcga agcgttgcac cgcttgggca gagagatcgc cgtagggcat cggatggcgc
     4741 acgacgacgg ggttaagctt gcgctgtttc aaaatcgccg cgatacgacg tattaccgag
     4801 tctttcccac aacccgtgcg tacggcacag acggaaatca ccggccgcga cgatcgcaaa
     4861 gaactgcgct ccggcccgat taattgaaaa tcagcgccac aggccaaaac ccgcgatgcc
     4921 aagtgcataa ccgcgacatg agatagatcg ctgtaggcga ataccacctg ctcgatgcgc
     4981 aaatcgcgca gcagcttgtc taagtcgtcc tcgggataaa ttggcatccc gttgggatag
     5041 agcgcgccgg cgagatcggc gggatagcgc cgtccagcga tgccgggaat ctgcgcggcg
     5101 gtgaacgcca tgacttcgac gcgcgcatcg gcgcgaaagc aaacattgaa attgtgaaaa
     5161 tcccgccccg ccgcgcccat gatgagaaca cgcttgcgcc tcgcctcatc tttttttgat
     5221 tgccctcgct ctaccacgac accagactgt cctttcgcaa cgatgcatcg ccttgctgta
     5281 ttgttcagca agatatgtgc cccggcgcgg ctcgcgtatg cggcgagcat ttctaagctc
     5341 gtgctcattt cttcgcatat ctgctattcg ccagcgcctt ttcttcccaa ctctgcgaag
     5401 gatcggcgga tcatttcgca tttgcgcaag aaatcccgtg atctgaaagc gattacgcgc
     5461 tggcataacc tgtgcgtttg agattgtcaa gccggacaga atcggggtcg ggtgccaccc
     5521 cgtgccgatg actgttgcat agattgttat gaatcaccga accatcgctt a
//
LOCUS       DATIRS010000378         1895 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1013060, whole genome shotgun sequence.
ACCESSION   DATIRS010000378 DATIRS010000000
VERSION     DATIRS010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1895)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1895)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1895
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1013060"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            324..418
                     /locus_tag="VLM90_04735"
     tRNA            324..418
                     /locus_tag="VLM90_04735"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:358..360,aa:Sec,seq:tca)
     gene            complement(472..921)
                     /locus_tag="VLM90_04740"
     CDS             complement(472..921)
                     /locus_tag="VLM90_04740"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSQ12297.1"
                     /translation="MATKKSYLVPVDFSKPADIALDHAIKLARENKAGLILLHIIADQ
                     SMDMAASEGVTPALYVDYEKIVREEANMQMQKLLKKKKLGPKDCRALLVRRGDPARAI
                     ANQAKKLKASMIVMGSHGRTGLKRLVLGSVAERTLRYAGCPVLIVKK"
     gene            complement(1005..>1895)
                     /locus_tag="VLM90_04745"
     CDS             complement(1005..>1895)
                     /locus_tag="VLM90_04745"
                     /inference="COORDINATES: protein motif:HMM:NF014325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-binding protein"
                     /protein_id="HSQ12298.1"
                     /translation="TPWLIQIGHRLARGPEWRGAGSHERPADGAHGAGSPGRGHVIIV
                     GYGVNGRNLARVLKEVGVPYRILELDPDLVRDATAAGETILFGDAARPEILRQTGLES
                     ARVLVIAISDPSATTRIGAQARRLHPELYIIVRTRYVAEIEHLYRLGADEVIPEEFET
                     SIEIFARVLDRFHIPRNLISLQVELIRQGHYGMLRGLRLQGKQLDELNRFLIGITADI
                     YMILDGSPALGRNLDEIDLQKRSGATVIAAVRDGKFFNNVDVDFRLRAGDMLVLLGAH
                     KALDDAAQILKPAAENGAPQ"
BASE COUNT          358 a          548 c          560 g          429 t
ORIGIN      
        1 atggaagatc atggttttct cctaacgcct gagggacgcg aggtctattt tcacaggaac
       61 agtgtcctgg cgcctggatt cgatcgtctg gaaattggtc acgaagtgta ttttgccgag
      121 gaactcggcg ataaagggcc ccaggccagc accgtgcggt tggcgggtaa atgactccat
      181 aactagccat cgaaagcggc gggatcgcga gactgtgatt gctcgcgcgc atcgcattac
      241 ttccaattgc agtatccggg tcacttctcg gctatcgcct ttaccctcgc cagtctccat
      301 ggtaaccaat tgactcggct tgtggagaag gaaggtgccc ggtggtgccg ctggtcttca
      361 aaaccagtct gggggccgta aggttcccgg agggttcgac tccctccctt ctccgccatg
      421 aaagcgttta tgtcggcttg gctatatcca cgacgagaat tccttgtggg attatttttt
      481 tacgatcagg accggacagc cggcgtagcg cagcgtccgc tcggcgacac tgcccagcac
      541 cagacgctta agccccgtgc gcccatgact gcccatgacg atcatcgacg ctttgagttt
      601 tttggcttga ttggcgatgg ctcgggcggg atcgccgcgc cgaacgagaa gcgctcgaca
      661 atctttcggc ccgagttttt tcttttttag caatttctgc atttgcatgt ttgcttcttc
      721 acgcacgatc ttttcatagt ccacgtagag cgccggggtc accccttccg aagctgccat
      781 gtccatcgac tggtcggcga tgatatgcag cagaatcagt cccgccttat tctcacgggc
      841 cagcttgatg gcgtgatcga gcgcgatgtc cgcgggttta gaaaagtcca ccggcacgag
      901 gtacgatttt tttgttgcca tgggatgtgc tcctatttta gctttgccga tatttttctc
      961 ggtaggatgc ccgttagcag tgcagccacg ggttgctcca aatgtcattg cggcgcgcca
     1021 ttttctgctg ctggcttcaa gatctgtgcg gcatcatcca gcgctttgtg cgcgcccaag
     1081 aggacgagca tatcaccggc ccgcaagcga aagtcaacgt cgacattatt aaagaacttg
     1141 ccgtcacgca ccgcggcgat gaccgtggcg ccgctgcgct tctgcaaatc gatctcatct
     1201 aggtttctgc cgagcgctgg cgagccgtcc aagatcatat agatatcggc cgtgatgcca
     1261 atgagaaagc ggttgagttc gtcgagctgc ttgccttgga ggcgcaggcc gcgcagcatg
     1321 ccataatggc cctggcggat cagctccacc tgcagcgaga tcagattgcg cgggatatga
     1381 aagcgatcga gcacgcgggc gaatatttca atcgaggtct cgaactcctc ggggatcact
     1441 tcgtcggcgc cgagccggta gagatgctcg atttcagcca cgtaacgggt gcgcacgatt
     1501 atgtatagct cggggtgcaa gcgccgcgct tgggcaccga tcctggtggt cgcgctcggg
     1561 tcggaaatcg cgatcaccaa cacccgggcg ctttcaaggc cggtttggcg caaaatttcc
     1621 ggccgcgccg cgtcgccgaa tagaatcgtc tcgcccgccg cggtcgcgtc gcgcacgaga
     1681 tcggggtcga gctcgagaat gcgatagggc acaccgactt cttttagcac ccgggcgaga
     1741 ttcctgccgt tgacaccgta gccgacgatg atgacatggc cccggcccgg cgacccagcc
     1801 ccgtgcgcgc cgtcggctgg gcgctcgtgt gaacccgctc cacgccactc ggggccgcgg
     1861 gcgagacgat ggccgatttg gatcagccag ggcgt
//
LOCUS       DATIRS010000379         2027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_423125, whole genome shotgun sequence.
ACCESSION   DATIRS010000379 DATIRS010000000
VERSION     DATIRS010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2027
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_423125"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..339
                     /locus_tag="VLM90_04750"
     CDS             <1..339
                     /locus_tag="VLM90_04750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12299.1"
                     /translation="ANSELVREERDTDGDGYFDLRILYEKGQIRAQEADTNGDRRVDV
                     WVNFTNGERVEQLEDLKAEGKITARYVFAGGQVISQEAVADGEPPRASPAFGTVAEEH
                     RAMALTPPPA"
     gene            415..1536
                     /locus_tag="VLM90_04755"
     CDS             415..1536
                     /locus_tag="VLM90_04755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12300.1"
                     /translation="MRRLAAFIILGLIAQGCETAVTQNPPGSGQVPGATANPQQAKID
                     NDRRWAHAVESAQKAAFLGGIFGGPFGAPASMVMGVIGFTYGMFSADSKIAEEKAQAQ
                     VRYQRESDKDRVLESAIEQEIERQRALENQIAGITGQPVSTQPARLPPQVNQPAPAVS
                     NPPPQSGNPAGAITVARTSTPPSPPPFRNVEVRDINNDGVPDIWIYYNPQKPGEIIRQ
                     EEATKNDGRVDAWSYFQNGQMVRRDVDRRGSGRPDTIYYYEIDKIVREERDETGQGRM
                     TYRASYQNGRIEKVEKDSTGQGRTDLWIFYDISRDGEVVLKEERDLNGDGVADLWSFY
                     DNGRLVRRDVNAPGLEILSKQDQVPLPTSEIRHLATPGS"
     gene            1538..>2027
                     /locus_tag="VLM90_04760"
     CDS             1538..>2027
                     /locus_tag="VLM90_04760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12301.1"
                     /translation="MTYDSSSSEDAGLLSLFRSPFLLPSLIFHGLLFLLALRTAALTI
                     VKPAAETPISVQLMEVRTGSSESKSIGPGQGAGGPKTMPKLGLPIPPRQQTGKLDSGT
                     VESTAPSTKSEAAPEPKLVPLPGPKVLATDSRETVNAKENSPDSLVSLPTKAAPSNLP
                     GTT"
BASE COUNT          481 a          589 c          581 g          376 t
ORIGIN      
        1 gccaatagtg agctcgtgcg cgaggagcgc gacaccgacg gcgatggcta tttcgacttg
       61 cgaattctct atgaaaaggg ccaaatccgc gctcaagaag ccgacaccaa tggcgatcgg
      121 cgcgtcgatg tctgggtgaa ttttaccaac ggcgagcgag tcgaacagct tgaagatcta
      181 aaggccgagg gtaagataac cgcacgctat gttttcgcag gcggacaggt gatcagtcaa
      241 gaagcggtcg ccgatggcga accgccgcgg gcgtcgcccg ccttcggaac cgttgcggaa
      301 gagcaccggg ctatggcgct gacaccgccg ccggcgtagg ctttgagagc ccgcgttacc
      361 gggttgccca gggacattga aatctagtag gatcgtgtag gttggcaaag tttaatgaga
      421 aggctcgctg cattcataat attaggtctc atcgcccagg gttgcgaaac cgcggtaacc
      481 cagaatccgc cgggttccgg gcaagttcct ggcgcaaccg ccaaccccca acaggctaaa
      541 atcgacaatg atcgacgctg ggctcatgcg gttgagagtg ctcagaaagc ggcctttctc
      601 ggcggcatct tcggcggacc cttcggtgcg ccggcaagca tggtcatggg tgtgatcggc
      661 ttcacctacg gcatgtttag cgccgattcg aagatcgccg aagagaaggc tcaagcccag
      721 gtgcgctatc aaagggaatc cgacaaagac cgcgtcttgg aaagtgccat cgagcaggaa
      781 atcgaacgcc agcgcgcctt ggaaaatcag attgccggaa taactgggca gccggtcagc
      841 acgcaaccgg cgcgcctgcc accccaagtc aatcagccgg caccggccgt gtcgaatcct
      901 ccgccacagt cgggtaatcc tgctggcgcc atcacggttg cccgcaccag caccccgccg
      961 tcgccgccgc cttttcgcaa tgtcgaagtc cgcgatatca acaatgacgg cgtgcccgat
     1021 atttggattt actacaatcc gcagaagccg ggcgagatta tccgtcagga agaagcgacc
     1081 aagaacgatg gtcgcgtcga tgcctggagc tatttccaaa atggccagat ggtccggcgc
     1141 gatgtcgacc gtcgcggcag cggtcgcccc gacaccattt attattacga gatagataag
     1201 atcgtccgtg aagagcgcga cgagaccgga caaggccgca tgacctatcg cgcgagctat
     1261 cagaacggcc gcattgagaa agtagagaag gattccaccg gccaaggacg gacggatcta
     1321 tggatcttct acgacatttc tagagacgga gaggtcgttc tgaaagaaga gcgcgactta
     1381 aacggtgacg gcgtcgccga tctttggtct ttctacgata acggcaggct agtgcgccgg
     1441 gatgtcaatg ctccaggact ggagatcctg tccaaacaag atcaagtgcc cctgcctacc
     1501 agcgaaatta gacatctcgc gactcccggc agctaaaatg acctacgatt cctcgtcaag
     1561 cgaagatgct gggttgctat cgctcttccg cagcccgttt ttgttgccgt cgttgatctt
     1621 ccatgggcta ttatttctct tagctttacg cacagcggcg ctgacgatcg tcaagcccgc
     1681 cgccgaaacg ccgatctctg tgcaactgat ggaagtgcgc actggtagct cggaatccaa
     1741 gagtatcggt cccggccaag gcgccggcgg gccgaaaacg atgcccaagc ttggtctgcc
     1801 aatcccgccg cggcaacaga ccggcaaact agacagcggc accgttgaga gcaccgcgcc
     1861 gtcgaccaaa tcagaagccg ctccagaacc aaagcttgtc ccattgccag gacccaaagt
     1921 gctcgccacc gacagccgag aaacggtcaa tgctaaggaa aattcgccag attctctggt
     1981 gagtttgccg acaaaagcag cgccatcgaa tctccccggt actactg
//
LOCUS       DATIRS010000380         1501 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1504501, whole genome shotgun sequence.
ACCESSION   DATIRS010000380 DATIRS010000000
VERSION     DATIRS010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1501
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1504501"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            218..1384
                     /locus_tag="VLM90_04765"
     CDS             218..1384
                     /locus_tag="VLM90_04765"
                     /inference="COORDINATES: protein motif:HMM:NF039910.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSQ12302.1"
                     /translation="MGELMRRYWIPALLSEEIPEPDCPPVRVPILSEKLVAFRDSRGR
                     VGLLAEHCLHRGTSLFFGRNEECGLRCIYHGWKYDMDGNVLDTPAEPAGSDFKTKLKH
                     VAYPTMEAAGIVFAYLGPSDKLPLLPNYEWAQLPKDQTYVTKALMDCNYLQGLEGECD
                     SSHLSFLHREFSATGRRQLFALDSAPAYETEETDFGVRLIATRNAGPDSQYVRVSSFV
                     MPIACWVPARNRETHIYVPVDDEHAWRYDLGFLQDRKPTVEDWNRKTQIGPDYRKIRN
                     LQNNYLQDRQVQATVNYTGIENFLNHDGCATETMGPIYDRSREHLGVSDKAVIAVRKY
                     LINAVKEFQAGKEPPHIVRDPARNRFPHIDTFAQTIPASIHWRERFAHLKLTTA"
BASE COUNT          325 a          437 c          445 g          294 t
ORIGIN      
        1 caaataccgt tccgccagca ttcggcgatg aagccggaaa atagtggcgg gaccgagctt
       61 agcaaaagag gaatcttacg gtgctaactt ttgtgaccgc gctttcggtt cttggaatcg
      121 gctgtcttag tgagtattct cccaagcgga ggtgaagtgc taaatgcttc ctcaagaaca
      181 caacgagcta ttgaccagga ccgcgacggg gactccgatg ggagagctca tgcggcgcta
      241 ttggattccg gcgttgttat ccgaggagat tccggagcct gattgcccgc cggtgcgggt
      301 gcccatccta agtgagaagc tggtcgcgtt ccgcgacagc cggggacggg tggggttgtt
      361 ggcagagcac tgcttgcatc gcggcacatc gctgtttttc gggcgcaacg aggaatgcgg
      421 cctgcggtgc atttaccacg gctggaaata cgacatggac ggtaacgtgc tcgacactcc
      481 ggcggaaccg gccggcagcg atttcaagac caagcttaag catgtcgcct acccgacaat
      541 ggaagcggcg ggaatcgtct ttgcctacct ggggccgagc gacaagctgc cgctgttgcc
      601 gaactacgaa tgggcgcaac tgcccaagga tcagacttac gtcaccaaag ctctgatgga
      661 ctgcaactac ttgcaggggc tcgaaggcga atgcgattcg tcgcaccttt cgttcttgca
      721 ccgtgagttc agcgccaccg gccgccgcca gttattcgcc ttggattcgg cgccggccta
      781 tgaaaccgag gagaccgact tcggcgtgcg cttgatcgcg acgcgcaatg ccggacccga
      841 cagccaatac gtgcgggtgt cgagcttcgt catgccgatc gcctgctggg tgccggcgcg
      901 caaccgcgaa acgcatattt atgtgccggt cgatgacgag cacgcatggc gctacgatct
      961 gggctttctc caggaccgca agccgaccgt cgaagactgg aatcgtaaaa ctcaaatcgg
     1021 ccccgactac cgcaaaatcc gcaacctcca gaataactat ctgcaagacc gccaagtcca
     1081 ggcgacggtg aattacaccg gcatcgaaaa ctttctcaat cacgacggct gcgccaccga
     1141 aaccatgggg ccgatttacg atcgctcgcg cgagcatttg ggggtgagcg acaaggcggt
     1201 gatcgccgtg cgcaaatacc tcatcaacgc ggtcaaagag tttcaggccg gtaaagaacc
     1261 gccgcacatc gtgcgcgacc cggcgcgcaa tcgctttccg cacatcgata cgtttgcgca
     1321 aactatcccg gcaagcattc actggcgcga gcgtttcgcg catctgaagt tgacgacagc
     1381 gtaaagcagt ggcgctgatc gagtttggcc tttcaggatg cgcgccggcc tcgaccgtca
     1441 gttccgccta gtggatcaac tggcgggcaa cctccatggc cggtcggcga tccttattga
     1501 t
//
LOCUS       DATIRS010000381         1783 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1406383, whole genome shotgun sequence.
ACCESSION   DATIRS010000381 DATIRS010000000
VERSION     DATIRS010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1783
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1406383"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..262)
                     /locus_tag="VLM90_04770"
     CDS             complement(<1..262)
                     /locus_tag="VLM90_04770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12303.1"
                     /translation="MQAATVAEVAAKVKSLKAPDRIAYLLKGAQAEGELAYYGTLPID
                     EFLPLARLYNSRYRAMALNHYFSPRDGILSRTLTEARAGRHAV"
     gene            complement(468..1049)
                     /locus_tag="VLM90_04775"
     CDS             complement(468..1049)
                     /locus_tag="VLM90_04775"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HSQ12304.1"
                     /translation="MADVAQRVYLIRHGETEWSRAGKHTGVTDVSLTDHGRQTARMLQ
                     PVLALQQFVLVVTSPLQRAHETCELAGLAKFSRVEPDLMEWNYGEYEGLTTKQIQSAK
                     PGWSVFHHGCPGGETSEQVAGRADRMLAKVRATDGNVALFAHGHILRVIAARWVNQPP
                     SFGEHLLLDTATLSVLGYYYDSPALKTWNAPVS"
     gene            complement(1236..>1783)
                     /locus_tag="VLM90_04780"
     CDS             complement(1236..>1783)
                     /locus_tag="VLM90_04780"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF044283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ12305.1"
                     /translation="CGFPLLKPSSGDNLHFSLMLSALIWNSLDEAGVPDVQAVWSHPS
                     GGRFMTVLAIKQRYPGHARQAAMIASQCRSGAYLGRYVIVVDEDIDITNTEEVIWAIS
                     SRSDPVDSIEILRRCWSGPLDPRIPVGEKGFNSRAIIDATRPYEWRDKFPKSSGHSRE
                     LKDKVAGDWQGFLNDKVGAGR"
BASE COUNT          386 a          533 c          500 g          364 t
ORIGIN      
        1 ccaccgcatg ccgcccagcc cgcgcttcgg tcaaagtccg gctgagaatc ccgtcccgcg
       61 gcgaaaaata atgattcaac gccatcgcgc gatagcgcga gttgtaaagc cgcgccaacg
      121 gcaaaaactc atcgatcggc aaggtgccgt aataagccag ctccccttcc gcctgagcgc
      181 ctttgagaag gtaggcgatg cgatccggcg ccttgagcga ctttaccttc gccgctactt
      241 cggcgaccgt cgcggcttgc accggagatc gcgcagtcga taaaagagac aacagcaaaa
      301 cggcaagtcc taaaactgat ttcatcccat atagcataga gtcagccttc ctcgttccgg
      361 cgcgattgcc accgatcaaa gcatcgtttt atagaacgaa cacgtgaggg tcaaattaag
      421 atcgctacgt ggacaactac aaataatcag cgaggtcttt gcaaatacta actgaccggc
      481 gcgttccaag tcttgagcgc cggagagtcg tagtaatagc caagaacact taacgtcgct
      541 gtgtcgagca acaagtgttc gccgaagctg ggcggctgat tgacccaccg cgccgcgatg
      601 accctgagga tatggccatg cgcgaataac gcgacgttgc catcggtggc gcggactttg
      661 gcgagcatgc gatcggcgcg gccggcgacc tgctccgatg tctcgccgcc gggacagcca
      721 tgatgaaaaa ccgaccaacc cggcttcgct gattgaattt gcttggtcgt gaggccttcg
      781 tattcgccgt agttccattc catcaagtcc ggttcaaccc ttgagaactt tgcgagtccc
      841 gccaactcgc aggtttcgtg cgctcgttgg agcgggctgg tcacgaccaa aacaaactgc
      901 tgaagcgcca aaacaggctg caacatccgc gcggtttgcc gcccgtgatc agtaagcgac
      961 acatcggtga cgccggtatg tttgccagcg cggctccatt cggtttcgcc gtggcggatc
     1021 agatagactc tttgcgctac atcagccatc gctcaaatgg tactgctgtc gtttaactta
     1081 accttgtcag cacaaattgt ccggtcaact gccgccacgc ccccacccca gggcgtatcg
     1141 caatacgccc tacatttcgg attccacctt acgccctttt gcgtttccga tcgctctgag
     1201 ctttgtcgaa gggtgcggcc atttccaccg tccgattatc ttccggcgcc gaccttgtcg
     1261 ttcaaaaacc cctgccagtc gccggcgact ttatctttta gctcacggct gtggccgctc
     1321 gacttgggga acttgtcgcg ccactcgtag gggcgcgtgg cgtcgatgat agcgcgcgag
     1381 ttgaagcctt tttcgccgac cggaatgcgc ggatcgaggg gaccgctcca gcagcgccgg
     1441 agaatctcga tggagtcaac cgggtcggag cgcgagctga tcgcccagat gacttcctcg
     1501 gtattggtaa tatcgatgtc ttcgtcgacg acgatgacgt agcggccaag ataggcgccg
     1561 gagcggcact ggctggcgat catcgccgcc tggcgggcgt gaccgggata gcgctgcttg
     1621 atcgccagca cggtcatgaa gcggccgcct gaaggatgcg accaaacggc ttgcacgtca
     1681 ggcacaccgg cttcgtcgag agaattccag atcaacgccg agagcatcaa cgagaaatgt
     1741 aggttgtcgc cgctggaagg tttgagcaat gggaaaccgc aca
//
LOCUS       DATIRS010000382         1593 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1701578, whole genome shotgun sequence.
ACCESSION   DATIRS010000382 DATIRS010000000
VERSION     DATIRS010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1701578"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..789)
                     /locus_tag="VLM90_04785"
     CDS             complement(<1..789)
                     /locus_tag="VLM90_04785"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12306.1"
                     /translation="MLSIDADAHVIECEKTWDYLEGADKRYRPVPIAVDMPTGKKSNF
                     WIIGGRLIGGRDNIGQDTSKESREMANIDSRLKHMDDIGTGVQVLYPTLFLRPVTDNP
                     RIELALCKSYNRWMADIWSKDKKRLRWAVQLPLLTMDAALDELRWSKGNGACAVFMRG
                     IETNHVLHDPYFFPLYEEASRLNLPIGIHSGIGNFTVNDMLGAEPFRVAKLIVIGGFH
                     SMILNGILEKFPKLRVGAIEVAAQWVPYIVHDLNLRFPKLEGKEA"
     gene            complement(1005..>1593)
                     /locus_tag="VLM90_04790"
     CDS             complement(1005..>1593)
                     /locus_tag="VLM90_04790"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12307.1"
                     /translation="FGKENGACGVYMRGLESERSLSDPYFYSLYEQASALDLPICVHS
                     ANGAFTTYDFFADDPGFSKFKLAVIGAFHSLVFHAIPQRFPKLKIGIIEVSAQWIPYA
                     VHDLSRRFARRGRTFPQNILKENRIYVTCQTDDDLDQVLRYAGDDNLVIGTDYGHADN
                     AAEIEALRKLRTDGKISGRVIEKILQDNPSAFYGL"
BASE COUNT          351 a          459 c          439 g          344 t
ORIGIN      
        1 cgcttctttg ccttcgagct tggggaaacg cagattcaaa tcgtgcacga tatacggcac
       61 ccactgcgcc gccacttcga tggcgccgac gcgcagcttg ggaaactttt ccaggatgcc
      121 gttcaaaatc atcgagtgaa aaccgccgat gacgatcagc ttggcgacgc gaaacggctc
      181 ggcgccgagc atgtcgttga cagtgaagtt gccgatgccg gagtgaatgc cgatgggcag
      241 attgagccgg ctcgcctcct cgtagagcgg aaaaaagtac ggatcgtgca gcacgtgatt
      301 ggtctcgatg ccgcgcatga acaccgcgca ggcgccgttg cccttggacc agcgcaattc
      361 atccaacgcc gcgtccatgg tcaatagggg caactgcacc gcccagcgca aacgcttctt
      421 gtctttcgac caaatatccg ccatccagcg gttgtaggac ttgcacagcg ccagctcgat
      481 gcgcggattg tcggtcaccg gccgcaagaa tagagttgga tagagcacct gcacaccggt
      541 gccgatgtcg tccatgtgtt tcaaccgcga gtcgatgttg gccatctcgc gggattcctt
      601 cgaggtgtcc tggccgatgt tgtcgcgccc gccgatcaag cgcccgccga tgatccaaaa
      661 gttgcttttc ttgccggtcg gcatgtcgac ggcgatcggc accggccgat agcgcttatc
      721 ggcgccttct aaataatccc aagtcttctc gcactcgatc acatgcgcgt cagcatcgat
      781 acttaacatt tgaaacctcc gtagagtaaa tcttggttag cattctcatt caccacgagg
      841 cacatagcgc ggtaaagccg cagtctgaac tcggaatatc tctcgccaag acgcaaaggc
      901 cgcaaaggtc ggagaattac ggtgaagaaa cctgtcttta acaaatcatt tttccgtccg
      961 aactgggcgt ctttgcgcct ttgcgagaga atccaattct gctttcataa cccataaaac
     1021 gccgacggat tatcttgcaa gatcttctcg atcacccgtc cgctgatttt gccgtcggtg
     1081 cgcagcttgc gcagcgcttc gatctcggcg gcattgtcgg cgtggccgta gtccgtgccg
     1141 atgaccaggt tatcgtcgcc ggcgtaacgc agcacctggt cgagatcgtc atcggtctgg
     1201 caagtcacgt aaattcgatt ttctttcaaa atattttgcg gaaacgtccg gccgcgccgg
     1261 gcgaagcgcc ttgacagatc gtgcaccgcg tagggaatcc attgggcgct gacttcgatg
     1321 atgccgatct tcaacttggg aaagcgctgc gggatggcgt gaaacaccaa cgaatgaaac
     1381 gcgccgatga cggcgagctt gaacttacta aagcccggat cgtcagcgaa aaaatcatag
     1441 gtggtaaacg cgccgttggc cgagtgcacg cagatcggca aatcgagcgc gctcgcctgt
     1501 tcgtacaatg aatagaagta aggatcgctg aggctgcgct cgctttccag gccgcgcata
     1561 tagacgccgc aggcgccgtt ctccttgccg aac
//
LOCUS       DATIRS010000383         1539 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1209782, whole genome shotgun sequence.
ACCESSION   DATIRS010000383 DATIRS010000000
VERSION     DATIRS010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1539)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1539)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1539
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1209782"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1103)
                     /locus_tag="VLM90_04795"
     CDS             complement(<1..1103)
                     /locus_tag="VLM90_04795"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HSQ12308.1"
                     /translation="MITADRTVPTTCPYCGVGCGLQLHIKDDYIYKVTSSFDSVVNRG
                     NLCVKGRFGYDFVYNKDRVTTPLLRKSAQAPGARSQAFDRAQWRESSWDEALDYSADR
                     LVEIYRRDGANAMAVYCCAKATNEDNYLLQKMYRALFRSNNVDHCTRLCHAGSVVALQ
                     MALGSSAMSNTAAEVIHSDVFIVTGSNTAETHPIIALQMKAAVEKHGAKLIVVDPRRV
                     EMVNWAALWLPEKPGTDVPLFSAMAHVIIKERLYNQDFIDRRTEGFDDFAQSMEKFTP
                     EYAEAISGVDRNLIVQAARMYAGAKNAAIYWALGIPEHSHGTDNAMSLIHLALLTGHI
                     GRQGTGLNPLRGQNNVQGASDSGAMPWHYPGYQR"
     gene            complement(1100..>1539)
                     /locus_tag="VLM90_04800"
     CDS             complement(1100..>1539)
                     /locus_tag="VLM90_04800"
                     /inference="COORDINATES: protein motif:HMM:NF024247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HSQ12309.1"
                     /translation="LEMLDSAVDLSQAPEIQKLLDENHADRARFPDAERREHAVLDDN
                     PMYIRDYSKCILCWRCVQVCADDAQYTYAINFTGRGFDTAIGTFFDKPMPATSCVFCG
                     QCVGVCPTGALKPKREALLEQGFDLNEIIQATRGGKKRRRKSP"
BASE COUNT          276 a          433 c          507 g          323 t
ORIGIN      
        1 cgctgataac cgggatagtg ccagggcatg gcgccggagt ccgacgcgcc ctggacattg
       61 ttttggccgc gcagcggatt caaccccgtg ccttggcggc cgatgtggcc ggttagtaat
      121 gcaagatgaa tgagcgacat ggcgttgtcg gtgccgtggg agtgctcggg aatccccagc
      181 gcccaataga tcgccgcgtt cttcgcgccg gcgtacatgc gcgccgcctg aacgatcaag
      241 ttgcggtcga cgccggaaat cgcctcggca tattcgggcg tgaatttttc catcgattgc
      301 gcaaaatcat cgaagccttc ggtgcggcga tcgatgaaat cctggttgta gagccgctct
      361 ttgatgatga catgcgccat ggcggaaaac agcggcacgt cggtgcccgg cttctcaggc
      421 agccagagcg ccgcccagtt gaccatctcc acccggcgcg gatcgacgac gatgagcttt
      481 gcgccgtgtt tttcgactgc ggctttcatt tgcagggcga tgatcggatg ggtttcggcg
      541 gtgttcgacc ccgtgacgat gaaaacgtcg ctgtgaatca cctcggcggc ggtgttgctc
      601 atcgccgacg agccgagggc catctgcagc gcaaccaccg acccggcatg acacaaacgg
      661 gtgcaatggt cgacgttatt gctgcggaac agggcgcggt acatcttctg taataagtag
      721 ttgtcctcgt tggtcgcctt ggcgcagcag tagacggcca tggcgttggc gccgtcgcgc
      781 cggtaaatct cgaccagccg atcggcgctg tagtcgagcg cctcgtccca ggagctttcg
      841 cgccactgag cgcgatcgaa ggcctggctg cgcgcgcccg gcgcctgcgc tgacttgcgc
      901 aggagcggcg ttgtcacccg gtctttgttg taaacgaagt cgtagccaaa tcggcctttg
      961 acgcagaggt tgccgcggtt gaccacggag tcgaaggatg aagtcacttt gtagatgtag
     1021 tcgtccttga tgtgcagttg gagtccgcag ccgacgccgc agtaggggca ggtggtcggt
     1081 acggtgcgat cggcggtgat catggcgatt tcctccggcg ctttttgccg cctctggtgg
     1141 cctggatgat ttcattgaga tcgaaaccct gctcgagcag cgcttcgcgc ttgggcttga
     1201 gcgcgccggt ggggcaaacg ccgacgcact ggccgcaaaa gacgcagctg gttgctggca
     1261 tgggcttgtc gaagaaggtg ccgatggcgg tgtcgaaacc gcgcccggtg aaattgatcg
     1321 cgtaggtgta ctgggcgtcg tcggcgcaca cctgaacgca gcgccagcat aggatgcact
     1381 tggaatagtc gcgaatgtac atcggattgt catcgagcac ggcatgctcg cgccgttcgg
     1441 cgtcgggaaa gcgcgctcgg tcggcgtgat tttcatccag caatttttga atctccggcg
     1501 cctgggagag atccaccgcc gagtcgagca tttctagaa
//
LOCUS       DATIRS010000384         3472 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_226444, whole genome shotgun sequence.
ACCESSION   DATIRS010000384 DATIRS010000000
VERSION     DATIRS010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3472
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_226444"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1117
                     /locus_tag="VLM90_04805"
     CDS             <1..1117
                     /locus_tag="VLM90_04805"
                     /inference="COORDINATES: protein motif:HMM:NF020084.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FIST N-terminal domain-containing protein"
                     /protein_id="HSQ12310.1"
                     /translation="AQQAMAQAGIGRADGGIIFFTADHAAHGQELVATLARVIGTDCV
                     TGSSGAGVLTGAGEIEGEHGVAVMVFATDRFFARPFIFEPLRGNEAKLGETFGGFLAK
                     AQDEKSLMLLFPDTYNGNAQNLLEAIAARAGFHPIAGAGSSENGAAGATYQLCGDKLA
                     SNSLAGMYISGALETHIDITQGCQPITQPMTITKAENNLILEIDNQPALAVFAKLLKG
                     PLAEDLRRALAVLFVGLPADRSENSVAAGKYLVRNIIGLDPDAGIVAVADQVSEGQSM
                     IFTMRDGQRARDDLQEMLQRQLARLNGKKPAFGCYFNCCARGSSLYGIPGIDAAYIKQ
                     VLGDFPLIGMFGGYELAPLGRANHLFAYTGVLVLITE"
     gene            complement(1267..3093)
                     /locus_tag="VLM90_04810"
     CDS             complement(1267..3093)
                     /locus_tag="VLM90_04810"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HSQ12311.1"
                     /translation="MRIHRYTQWDGTQEILFPTTDDIINQLSDHLLEEEGVRRALRDM
                     MRRGFTSEDGQRSVKGLRDFLRQADEKRRELLNKYSPDSVKLTAEEQQKLSEKLSSLA
                     EKMEAYNEQMRNFMERMSGKFADRMDELGQKMSEAYQRYQELQQRLKQQIQERGMQGK
                     PNMSGEQNPQSLMDMLDRMSELLNNEDFLKNLPSMMDNAINNLESMLENMSNMTEEQL
                     QQMSDMMNQMQQLEQLMNQFPFQGSQRMGMGEAGQVLSQLRGLERFLRWGQRGMGDPS
                     DLNLDELREILGEEAYENLKYLQNVEQMLEEEGFIVRGSHGLKLTAKGLRKIGDKALR
                     EIFQMLNKSRWGNHDTSARGSQGEHMEETKLYEYGDPMNINISETVLNALERRKPGDP
                     LRIHPEDFSVHRVEYSTVAETALLIDVSYSMLMNDALHAGKKVALALHRLIQTKYPQD
                     TLHLMAFRSNAKLIQAEDLPSIVSLTYFMEHGTDIKEALRYARQLLGSNRSANRQIIL
                     ITDGEPTAATLDRGGRLHSGWGSAMLHGRIVHETLKEVKRCTQSGIKINTFMLGADYY
                     RQGFVDQLSRLNIGRVFYTTPDQMGNYIMVDYLNNKKKRVGR"
     gene            3242..>3472
                     /locus_tag="VLM90_04815"
     CDS             3242..>3472
                     /locus_tag="VLM90_04815"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSQ12312.1"
                     /translation="MKHFAYVIVGAGFAGAATAYHLARRGVGDLLVLEQESIPGFHAS
                     GRNAAMVRQCIAEPDLTKLALDGAAFIRNLPAD"
BASE COUNT          656 a          988 c         1012 g          816 t
ORIGIN      
        1 ggcccagcaa gcgatggcgc aggcgggcat cggccgggcc gacggtggaa taatattttt
       61 caccgccgat cacgcggctc atggccaaga acttgtcgcg acccttgcgc gggtcatcgg
      121 caccgactgc gtcaccggat cgagcggcgc cggagtcttg actggcgccg gcgagatcga
      181 aggcgagcac ggtgttgccg ttatggtgtt tgccaccgat cggttttttg cccggccatt
      241 tatcttcgaa ccgctgcgcg gcaatgaagc gaagctaggc gaaacctttg gcggctttct
      301 cgccaaggcg caggatgaga aatcgctgat gctgctgttt cccgacacct acaacggcaa
      361 cgcgcaaaac ctcttggagg cgatcgcagc gcgcgccggt tttcatccga tcgccggcgc
      421 cggctcgtcg gagaacggcg cggccggggc gacctatcag ttgtgcggcg acaagctggc
      481 cagcaactcg ctcgccggta tgtatatctc cggcgctctc gagacccaca tcgacatcac
      541 gcaaggctgc cagccgatca cccagccgat gacgatcacc aaggcggaaa acaatttgat
      601 ccttgagatc gacaaccagc cggcgctggc cgtgttcgcc aagctgctca aggggccgtt
      661 ggccgaagac ctgcggcgcg cgttggcggt cctattcgtc ggcctgccgg cggatcgcag
      721 cgaaaacagc gtcgccgcgg gaaaatatct ggtgcgaaat attatcggct tggatccgga
      781 cgcaggcatc gtcgcggtgg ccgaccaggt gagcgaaggg cagtcgatga ttttcaccat
      841 gcgcgacggc cagcgcgccc gtgacgactt gcaagagatg ttacagcgcc aattagcgcg
      901 cttgaacggc aaaaagcccg ccttcggttg ctacttcaac tgctgtgccc gcggcagctc
      961 gctgtacggc atccccggca tcgacgccgc ttacatcaaa caggtgttgg gcgacttccc
     1021 gttgatcggc atgttcggtg gttatgaact cgcgccgctg gggcgggcca atcacctgtt
     1081 tgcttatact ggagtgctgg ttttgattac tgaataacct tcggcgccgt gatactaatt
     1141 ttggattttg gattgccgat ttcggattaa gggagaagcc tgcctagttc gggcttagcg
     1201 tcttattccg acaatctaaa atccaaaatc gaaaatccaa aataggaggg gtgggcggag
     1261 cggcggctag cggccgacgc gctttttctt gttgttgaga taatcgacca tgatgtagtt
     1321 gcccatctgg tcgggtgtcg tgtagaagac ccggccgatg ttcaagcgcg atagttggtc
     1381 gacgaagccc tggcggtagt aatcggcgcc gagcatgaag gtgttgatct tgatgccgct
     1441 ctgggtgcag cgtttcactt ctttcaaggt ctcgtgcacg atccggccat gcagcatcgc
     1501 cgagccccag ccgctgtgca accggccacc gcggtcgagg gttgccgctg tcggctcgcc
     1561 gtcggtgatc aatataatct gccgattggc actgcgattg gagcccaaca gctggcgcgc
     1621 gtagcgcagg gcttctttga tgtccgtgcc atgctccatg aaataggtga gcgaaacgat
     1681 ggacggcaga tcttcggctt gaatcaattt ggcattggaa cgaaatgcca tcaggtggag
     1741 cgtgtcctgg ggatattttg tctggatcag gcgatgcagc gccagagcaa cttttttgcc
     1801 agcatggagc gcgtcgttca tcagcatcga gtagctcacg tcgatcaaca atgcggtctc
     1861 ggcgacagtc gaatactcga cccggtgcac ggagaaatct tcggggtgaa ttctcaacgg
     1921 atcgcctggc ttgcgtctct ctaacgcgtt gagcaccgtc tcgctgatat tgatgttcat
     1981 cggatcgcca tactcgtaga gcttggtttc ttccatgtgc tcaccctggg agccgcgcgc
     2041 ggaagtgtca tgattgcccc agcggctttt gttgagcatc tgaaagattt cacgaagcgc
     2101 cttatcaccg atcttgcgca ggcccttggc ggtcagtttt agtccgtgac tgccgcgaac
     2161 gataaagcct tcctcttcga gcatctgctc gacattctgc aaatatttta aattctcgta
     2221 agcttcttca ccgaggatct cgcgcagctc atcgagattc aaatccgatg gatcgcccat
     2281 gccgcgctgg ccccagcgca gaaagcgttc caggccgcgc aactggctca atacctgccc
     2341 ggcctcgccc atgcccatgc gctgggagcc ctggaacggg aactggttca tcaactgttc
     2401 caactgctgc atctgattca tcatgtcgct catctgctgc agctgttcct cggtcatgtt
     2461 gctcatgttt tccaacatgc tttcgaggtt gttgatggcg ttgtccatca tgctcggcaa
     2521 gtttttgagg aagtcctcgt tgttcaatag ctcgctcatg cggtcgagca tgtccatcag
     2581 cgactgcggg ttctgctcgc cgctcatgtt cggcttgcct tgcatgccgc gttcttggat
     2641 ctgctgcttc aagcgttgct gcagctcttg gtagcgctgg taggcctccg acattttctg
     2701 gccgagttcg tccatgcggt cggcgaactt gccggacatg cgctccatga aattgcgcat
     2761 ctgctcgttg taggcttcca tcttctcagc caggctgctg agcttttcac tgagcttttg
     2821 ctgctcttcg gcggtgagct tgaccgagtc gggggagtat ttattgagca gctcgcggcg
     2881 cttctcgtcg gcctggcgga gaaagtcgcg cagccctttg accgagcgct ggccgtcttc
     2941 agaggtgaag ccccggcgca tcatgtcgcg caaagcgcgg cgcacgcctt cttcctctaa
     3001 cagatggtcg gagagctgat tgatgatatc gtcggtcgtg ggaaagagaa tttcctgcgt
     3061 gccatcccac tgggtgtaac gatggattct cattttcgtt gaactatagc gcagttccgg
     3121 gctgtttcaa acccaaaatt ggcttatcgc cgcgaccccc ttaaaccggt aaaaactctc
     3181 gctggccccc tttggaaata gcgccgactt cgtatagaaa atagaggcat tcactttcgc
     3241 catgaagcat ttcgcctatg tcatcgtcgg tgccggattc gccggggccg caaccgccta
     3301 tcacttggcc cgccgaggtg tcggcgactt gctagttttg gaacaagaaa gcatccctgg
     3361 ttttcacgct tccggacgca atgcggcgat ggtgcgccag tgtatcgccg agcccgacct
     3421 gactaagttg gcgctcgatg gcgcggcgtt tatccgcaac ctgccggcgg at
//
LOCUS       DATIRS010000385         2501 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_127684, whole genome shotgun sequence.
ACCESSION   DATIRS010000385 DATIRS010000000
VERSION     DATIRS010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2501
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127684"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..498
                     /locus_tag="VLM90_04820"
     CDS             <1..498
                     /locus_tag="VLM90_04820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12313.1"
                     /translation="SLETGIVNAAIFEGIFSRRLKAKGFNTLGEYSALKHQFLSQALV
                     VQRSFLQQRSDTLENLLKAEIEGVAYVLTPKNKPAMIKTLMRRMKTDAAAAEEGYLDL
                     LRAMERKPVPTVESMIHVQRLMKIQNPKIGDVKLEDINDARLIKKLDDSGFIDNAFAA
                     QGMKP"
     gene            583..1629
                     /locus_tag="VLM90_04825"
     CDS             583..1629
                     /locus_tag="VLM90_04825"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12314.1"
                     /translation="MSIWNHLGCKNCFVGVVSLGFFFLALPTNIRAAAAPTRLVIGYA
                     STTPRLMPLWMARDQGFFAKYGIESEPVLLRSGATLVTGMASGDIQIGRTAGAAVLSA
                     VAAGHDIKMLATFSSRNSYDVVTRPHIKRAEDLRGKKLAINSIGGGTWIGAMLWLEHF
                     GLDLQRDQILLQTIGDQGMQSQALESGVVDTVFVDSVYSKLLKQKGMNIIAESHELKQ
                     PLVSQSTVMPHNFLRQHPDVAEGYVKGEIEGIAFATAPKNKAAVIKTLMRRLRVDANT
                     AEEGYTDMLRGVDRKPFASLEGMRNLHRLLRPRNPKIADVKVEDVVDNRIMRKLEDSG
                     FIEKTFAAHGASFK"
     gene            1722..>2501
                     /locus_tag="VLM90_04830"
     CDS             1722..>2501
                     /locus_tag="VLM90_04830"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12315.1"
                     /translation="MKSSKQIVLGKLTLVIFTSIVMLAFGAQNARAAAAPAKQVVGYA
                     TFTARIVPLWLAQEQGFFTKYGIEVEPVFISGAPTSVAGLAAGSMQIGRTGGSAMLAA
                     VAAGHDFKVVAAFNTRNTYDLVVRPNIKRAEDLRGKTFGITSIGGTSWMGVILWLEHL
                     GLDEKRDNIRFQVIGDQSVQVQCVETGLCDAIAVDGVYTKQAKNRGMSVLGEYTQLKS
                     LLIGQSMVVPSAMLQQRPDVAEAYLKGEIEALVFSLAPRNKP"
BASE COUNT          578 a          730 c          713 g          480 t
ORIGIN      
        1 tccctggaga ccggtatcgt caatgcggcg atcttcgaag gtatcttcag ccggcggctc
       61 aaggccaaag gatttaacac gctgggcgaa tactccgcgc tcaaacatca attcctcagc
      121 caagccttgg tggtgcagcg cagtttttta cagcagcgca gcgatacgtt ggaaaatcta
      181 ctgaaggcgg aaatcgaagg agtcgcctac gtattgacgc caaagaataa gcccgcaatg
      241 atcaagactt tgatgcggcg catgaagacg gacgcggcgg cggccgaaga gggctatctc
      301 gacctgctgc gtgccatgga gcgcaagcct gtgccgacgg tcgaaagcat gatccatgtg
      361 cagcgcctga tgaaaataca gaatcctaaa atcggcgacg tcaagctcga agacatcaac
      421 gacgcgcgct tgatcaagaa actcgacgac agcggcttca tcgacaacgc cttcgcggcg
      481 caagggatga aaccgtaata atttgttaag ggtcaaggat tcaaaagttc aaggtcggac
      541 agctgaagga agtctaaaga cgcaccaagg agagactaat caatgagtat ctggaaccat
      601 ctaggctgta aaaattgttt tgtcggcgtt gtgagtctcg gatttttttt cctcgccctt
      661 cccacaaaca ttcgcgccgc cgcggcgcca accagactgg tcatcggtta cgcgtcgacc
      721 acgccgcggc tgatgccgct ttggatggcg cgcgatcaag gcttcttcgc caaatacggc
      781 atcgagtcgg aaccggtgct cttgcgcagc ggcgcgacgc tggtgaccgg catggcgtcg
      841 ggcgatatcc agatcggccg caccgcgggg gcggcggttc tatccgcggt ggccgccggt
      901 catgacatca agatgctggc aaccttctcg agccgcaact cctacgacgt cgtcacccgg
      961 ccccacatca aacgagccga agacctgcgc ggcaaaaagc tcgccatcaa cagcatcggc
     1021 ggcggcacat ggatcggcgc catgttgtgg ctcgaacatt tcggcctcga cttgcagcgc
     1081 gaccagattc tgcttcaaac gatcggcgac caaggcatgc agtcccaggc cttggaatcc
     1141 ggcgtcgtcg atacggtttt cgtcgacagc gtctacagta aactgttgaa gcaaaagggc
     1201 atgaacatca tcgcggagtc gcacgaattg aaacagccgc tggtcagcca atcgacggtc
     1261 atgccgcaca actttctgcg ccagcacccg gacgtcgccg agggttacgt taaaggcgaa
     1321 atcgaaggca tcgccttcgc cactgcgccg aaaaataaag cggcggtgat caaaactctc
     1381 atgcgccggc tgcgggttga cgccaacacc gccgaagagg gttacaccga catgttgcgc
     1441 ggtgtcgacc gcaaaccgtt cgcctcgttg gaaggcatgc gcaatctgca tcgactgctg
     1501 agaccgcgaa accccaagat cgccgacgtg aaagtggaag acgtggtcga taaccggatc
     1561 atgcgcaagc tggaagattc cggcttcatc gagaaaacct tcgccgccca tggcgctagc
     1621 ttcaaatagg agcgatctgc cgtcagcaat cgtctctcag ctttgatctt tgcgctggca
     1681 gctgatagct gattgacgac ggttaacgga ggccgatgtc tatgaagagt tctaaacaaa
     1741 tcgtcttggg caaactcaca ttggttattt tcacttccat cgtgatgctc gccttcggcg
     1801 ctcaaaacgc gcgcgccgct gcggcgccgg ccaagcaggt cgtcggttat gccaccttca
     1861 ccgcgcgcat cgtgccgctc tggctcgccc aggagcaagg cttcttcacc aagtacggca
     1921 tcgaggtcga accggttttc atcagcggcg caccgacgtc agtcgccggt ctagccgccg
     1981 gcagcatgca gatcggccgc accggcggca gtgccatgtt ggcggcggtc gccgccggcc
     2041 atgatttcaa agtcgtcgcc gctttcaaca cgcgcaacac ttatgacctg gtcgtccggc
     2101 ccaacatcaa acgcgccgaa gatttgcgcg gcaagacttt tggcattacc agcatcggcg
     2161 gcaccagctg gatgggcgtg atcctgtggc tggagcacct cggtctcgac gaaaagcgcg
     2221 acaacattcg tttccaagtc atcggcgatc aaagcgtcca agtgcaatgc gtcgagactg
     2281 gcctgtgcga cgcaattgcc gtcgacggcg tctataccaa gcaggccaag aaccgcggca
     2341 tgagcgtgct cggtgaatac acgcaactca aatctctgtt gatcggacag tcgatggtgg
     2401 tgccgagcgc gatgctgcaa cagcgcccgg atgtcgccga agcctatctg aagggcgaga
     2461 tcgaagcttt agtcttttcc ctggcgccga gaaacaaacc g
//
LOCUS       DATIRS010000386         2025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_914777, whole genome shotgun sequence.
ACCESSION   DATIRS010000386 DATIRS010000000
VERSION     DATIRS010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2025
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_914777"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1393
                     /locus_tag="VLM90_04835"
     CDS             <1..1393
                     /locus_tag="VLM90_04835"
                     /inference="COORDINATES: protein motif:HMM:TIGR00196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052855 - ADP-dependent NAD(P)H-hydrate
                     dehydratase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HSQ12316.1"
                     /translation="GKGNNGGDGFVVARLLKKKRIPCEVVLLARREELTADAAHNLRA
                     WSKLKGKVTELDGSKLQLLSQSFARHGLLVDAILGTGLKNAVAGLFGEAITLMNASGL
                     PTIAVDIPSGMDSDTGQQLGAAIQAEMTVALGYPKLGEVIHPGLTHVGELVVADIGID
                     SRALAEVAPQIELLDRETVRWLVPRRQSVTHKGTYGHLLVVAGARGKTGAAILACRAA
                     MRTGAGLVTLAAPRALNGIFAGALVEVMTEPLGDETCEQLEIFSDADWRRLIERKNVL
                     LFGPGIGVSDATQSATRWLLRNVAMPWVIDADGLNNLTLDLDRLRRAQTAPILTPHPG
                     EMVRLIGKSTADVNADRIEVARGFATAHRCHVVLKGARTVIATADGKVFVNPTGNPGM
                     ASGGMGDVLAGIIAAFLGQGLSAEEAMKLGVYLHGYVGDRAAEAKGPIGLIASDIVDG
                     LPKALAELSASAS"
     gene            complement(1765..>2025)
                     /locus_tag="VLM90_04840"
     CDS             complement(1765..>2025)
                     /locus_tag="VLM90_04840"
                     /inference="COORDINATES: protein motif:HMM:NF021873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2442 domain-containing protein"
                     /protein_id="HSQ12317.1"
                     /translation="RVTIVSALPDARLRVTFVDGTAGEVEMGAFLRNPDLDGTIFEPL
                     RDPVIFAQAQVVLGAIQWPNGADLAPDAMYDAIRERGTWVLD"
BASE COUNT          400 a          576 c          643 g          406 t
ORIGIN      
        1 cggcaagggc aacaatggcg gcgatggttt tgtcgtcgcc cggttgttga aaaaaaagcg
       61 catcccctgc gaggtcgtgt tattggcgcg gcgcgaggag cttacggccg acgcggcgca
      121 taacctgcgc gcctggagca aactcaaagg caaggttaca gaactcgacg gcagcaagtt
      181 gcagctgctc agtcaaagtt tcgccaggca cggccttttg gtcgacgcga ttctcggcac
      241 cggcttgaag aacgccgtcg ccggcctgtt cggcgaagcg atcacgctga tgaacgcatc
      301 cggcctgcct actattgccg tcgatattcc ctccggcatg gacagcgaca ccggacagca
      361 gttgggcgcg gcgattcaag ccgagatgac ggtggccctg ggttatccga aactcggcga
      421 ggtgattcat ccgggtttaa ctcacgtcgg cgagttggtc gttgccgaca tcggtatcga
      481 tagccgcgcg ttggccgaag tcgcgccgca aatcgagctg ctcgatcgag aaaccgttcg
      541 ttggttggtg ccgcggcgcc aatcggtcac gcataagggc acctacggcc atctgctggt
      601 ggtcgccggg gcgagaggga agaccggcgc ggcgatcttg gcttgccgcg cggcgatgcg
      661 cactggcgca ggtctggtga ccctcgccgc gccgcgggcg ttgaatggga tcttcgccgg
      721 cgcgctggtc gaagtgatga ccgagccact gggcgatgaa acgtgcgagc agttggaaat
      781 atttagcgac gccgattggc ggcgcctgat cgagcgcaaa aacgttttgc tttttggccc
      841 tggcatcggt gtcagcgacg cgacccaatc ggcgacgcgc tggctgttgc gaaatgtagc
      901 tatgccgtgg gtcatcgatg cggacggttt gaataatctc acgcttgact tggaccgcct
      961 gcgccgcgcc cagacggcgc cgattctcac gccccatccg ggcgagatgg ttcggctgat
     1021 cggcaagagc accgctgacg tcaatgccga ccgcatcgag gtcgcgcgcg gtttcgccac
     1081 cgcgcaccgc tgtcatgtgg tgctgaaggg cgcgcggacg gtgatcgcca cggcggacgg
     1141 caaggtattc gttaatccaa ctggaaatcc cggcatggcc agcgggggca tgggcgacgt
     1201 cctggcggga atcatcgccg cattcttggg ccaggggcta tcggccgagg aggccatgaa
     1261 gctcggcgtt tatttgcacg gctatgtcgg tgaccgcgcc gctgaagcca aggggccgat
     1321 cggactgatc gcatcggata tcgttgacgg tctgccaaag gcgctggcgg aactgtccgc
     1381 gtcggcttcc taacttctcg tgatgatctg cgagacgcta agatcatgtt tgtcccagtg
     1441 ctcgccaatc tctgcgtacg aattcgcttt ggatatagaa gcattattcc aaaggaatcg
     1501 tcccacgctg gacttgaaaa aatgaccgag gagacgatcg ctaggatcta aaaatggacg
     1561 atccactcct gcgagtgccg cgcttttcac ggtggagatt agttaagact ttttgaatca
     1621 gggtcgagtt ccgcacttca aagaatggtt ttccgcgctg tgagattacc ctgcgggtac
     1681 aaaggtcgga tggctcgtgg caacgcccct cttagtctga atcggagcag ttatcacgtt
     1741 tcttgggacg aacaggtgct tgattcaatc aaggacccag gtaccccgct cgcgaatagc
     1801 atcgtacatt gcatctggcg caaggtcggc tccgttcggc cactgaatcg cgccgagcac
     1861 gacttgagcc tgggcgaaga tcaccggatc gcgcagcggt tcgaaaatcg tgccgtcaag
     1921 atcggggttg cgcagaaacg cacccatttc gacctcaccc gctgtcccat cgacaaaggt
     1981 cacgcgcaaa cgcgcgtcgg gtaacgcgct gacgatcgtc acgcg
//
LOCUS       DATIRS010000387         2613 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_226615, whole genome shotgun sequence.
ACCESSION   DATIRS010000387 DATIRS010000000
VERSION     DATIRS010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2613
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_226615"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2498)
                     /gene="treY"
                     /locus_tag="VLM90_04845"
     CDS             complement(<1..2498)
                     /gene="treY"
                     /locus_tag="VLM90_04845"
                     /EC_number="5.4.99.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR02401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047470 - (1,4)-alpha-D-glucan
                     1-alpha-D-glucosylmutase activity [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malto-oligosyltrehalose synthase"
                     /protein_id="HSQ12318.1"
                     /translation="MRIPTATYRLQFHKDFGLADATGLIEYLRDLGVSDAYASPLFKA
                     RAGSMHGYDVVDHSQIDPALGGEEAFEAFAAGLKSAGLGLILDIVPNHMGIGETSNVW
                     WMDVLENGPSSSYAAYFDIDWQPANPRLENKVMLPILEDQYGNVLEEGKLRLAYETGA
                     FFIYHYDASLPVAPRTYSAILAHQLDRLIATLGKDAAAVIELQSILTAIGHLPPCTEA
                     DSEKLEEGRREKEVIKRRIVALYQDSAEVRNSIDSTVRQFNGNVGEPQSFDLLDRLMD
                     AQAYRLAFWRVAGDEVNYRRFFDINELAAIRTETPAVFQATHQLILRLVSEGKVTGLR
                     VDHPDGLRDPMAYFNQLQQTQLGQDAGGHGSGNGSPARPLYIVAEKILSQGEPLPEDW
                     AVHGTTGYDFLAQVNSLLVRGASRRAFDKIYSDFIGVKSDYREMVNSRKKMIMLVSLA
                     SEINSLSHQLDRISERNRHYRDFTLNGLTFAIREVIACLSVYRTYADAHAGTVSDTDR
                     IYIESAVEEAKRRNPRTARAIFDFIKDTLQLNNLGRFREPDRQHVIDFVMHLQQVSGP
                     VMAKAVEDTSFYIYNRLVSLNEVGGEPEQFGLSLENFHRQNSARRKNWPHSMLASSTH
                     DTKRSEDTRARIDVLSEIAADWRAALLRWTKLKGAKKTPVNGAPGPDRNDEYLFYQTL
                     VGTWPGGSLNREELAELRQRIAAYMQKAIKEAKFHTSWVNPNDAYVRAVENFVAQALS
                     AESGDEFMNDFSQFHGRIAYVGMLTSLAQTLLKMTSPGVPDFFQGTELWDLSLVDPDN
                     RRPVDYAKRRGFLDELKRGEQTDRAGLLRDLLSH"
BASE COUNT          531 a          769 c          745 g          568 t
ORIGIN      
        1 cagtgagaaa gcaaatcgcg caaaagaccg gcgcgatcgg tttgctcccc ccgcttgagt
       61 tcatctagaa aacctcttcg cttggcatag tccaccggcc ggcggttatc gggatccacc
      121 aggctcagat cccagagctc cgtcccttga aaaaagtccg gcacgccggg tgacgtcatc
      181 ttcagcagcg tctgcgccag cgaagtgagc atgccgacgt aagcgatccg cccatgaaac
      241 tgactaaagt cgttcatgaa ctcgtcgcca ctctcggcac tgagtgcttg cgccacaaag
      301 ttttccacgg cgcgaacgta agcatcgttt ggattcaccc agctggtatg aaacttggct
      361 tccttgatcg ccttctgcat gtaggcggcg atgcgctggc gtaactcggc caactcttcg
      421 cggttaagcg aaccgcccgg ccaggtacca accagcgtct gatagaacaa gtactcgtcg
      481 ttgcggtcgg gaccgggcgc gccattgacc ggggtttttt ttgcgccctt gagtttagtc
      541 cagcgcagca gcgcggcgcg ccaatccgcc gcgatctccg atagcacgtc gatacgggcg
      601 cgcgtatcct cgctgcgctt ggtgtcgtgg gtcgagctgg ccagcatcga gtgcggccag
      661 ttttttcgcc gcgcactgtt ctggcggtga aaattttcga gcgacagccc aaactgttcc
      721 ggttcgccgc cgacctcgtt caacgacacc agccggttgt agatatagaa agacgtgtct
      781 tccaccgcct tggccatgac cggtccgctg acctgctgaa gatgcatgac aaagtcgatg
      841 acatgctggc ggtctggttc gcggaagcgg ccaaggttat tgagctgtag cgtgtccttg
      901 atgaaatcga agatcgcccg cgccgtacgc ggattgcgtc tcttcgcctc ctctaccgca
      961 gattcgatat atatccggtc tgtgtccgac acggtcccgg cgtgagcgtc ggcataggtc
     1021 cgatagacgg acagacaagc gatcacctcg cgaatcgcaa aggtcaggcc attgagggta
     1081 aagtcccggt aatgacgatt gcgctcggaa atgcggtcga gctggtggct cagggaattg
     1141 atttcgctcg ccaaggacac caacatgatc attttcttgc gcgaattcac catctcacga
     1201 taatcgcttt tcacgccgat gaagtcgcta taaattttat caaacgctcg gcggctcgcg
     1261 ccgcgcacca acaggctgtt gacctgggcg agaaagtcgt agcccgtggt gccgtgaacc
     1321 gcccaatcct ccggcaacgg ctcgccttgc gaaagaatct tttcggcgac gatgtacaat
     1381 ggccgcgccg gcgatccgtt gccacttcca tgcccgccgg catcttggcc caactgggtt
     1441 tgctggagtt gattgaagta ggccattgga tcgcgcagac cgtccggatg atcgacccgt
     1501 aagccggtga ctttgccctc gctgaccagc cgcaggatca gttggtgcgt cgcttggaaa
     1561 accgccggag tttccgtgcg gatcgccgcc aactcgttga tatcgaaaaa ccgccggtag
     1621 ttgacctcgt cgccggcaac acgccagaac gccaagcgat aggcctgcgc gtccatcaag
     1681 cgatccagca gatcgaagct ctgcggctcg ccgacgttgc cgttgaattg tcgaaccgtc
     1741 gaatcgatgg aatttcttac ctcggcgctg tcctgataca gcgcgacgat gcgccgtttg
     1801 atcacttcct tctcgcgccg gccttcttca agcttttccg agtccgcttc ggtgcacggt
     1861 ggcaggtggc cgatggcggt taaaatactc tgcagctcga tcaccgccgc ggcgtctttg
     1921 ccgagggttg cgatcaagcg atcgagctga tgcgccaaaa tggcgctgta ggtgcgcggc
     1981 gccaccggca gactggcatc gtaatggtaa atgaagaacg cgccggtttc gtaggccagc
     2041 cggagcttgc cctcttccag cacgttgccg tactggtctt cgaggatcgg caacattact
     2101 ttgttctcaa gccgcggatt ggccggctgc cagtcgatat cgaagtaagc cgcgtagctc
     2161 gaactaggac cgttctcaag cacatccatc caccagacgt tgctggtttc gccgatgccc
     2221 atgtggttgg gcacgatatc caaaataagc cccagacctg cggattttaa gccggcggca
     2281 aaagcctcaa aagcctcctc gccgccgagt gccggatcga tttggctgtg atcgacgaca
     2341 tcgtaaccat gcatactgcc ggcacgggct ttgaatagcg gcgaggcgta ggcatcggag
     2401 acgccgagat cgcgcagata ctcgatcagc ccggtagcat cggcaaggcc gaagtctttg
     2461 tgaaattgta agcgataggt cgcggtcgga atgcgcatta ttttctaccc cgttgtgagc
     2521 atgcccgtta aatattttct cgcaaaggga gcttccctat ttcgttgttg ccgccaggcc
     2581 aatcgaatag gcaaagatcg acgccggtgg cgt
//
LOCUS       DATIRS010000388         1798 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_914857, whole genome shotgun sequence.
ACCESSION   DATIRS010000388 DATIRS010000000
VERSION     DATIRS010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1798
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_914857"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..507
                     /locus_tag="VLM90_04850"
     CDS             <1..507
                     /locus_tag="VLM90_04850"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HSQ12319.1"
                     /translation="NIAAAAILHAGHRHHNLNMRGAFLHVMSDAIGSLGAIAAGAIIL
                     ATGWYLADPLISIFIGALILFTSWSLVKDSLSVLMQSVPKGIDLDEVRQTIEAVAGVN
                     KVHDLHVWAVTSDIYTLSAHAVVENGGDFHQVLNGIEDTLKERFNIEHTTIQLETESR
                     EDKEFKDF"
     gene            complement(923..>1798)
                     /locus_tag="VLM90_04855"
     CDS             complement(923..>1798)
                     /locus_tag="VLM90_04855"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12320.1"
                     /translation="QGIGFAAVIPLTIVLIGDLLEGDKEISGQGLKVFLDRIGYFIFP
                     PLGGLLATIAWFWPFVFYVLAIPLGLIALFCMPETQSKSKQRATGYLGDVLRLTRHPR
                     LMIAFTAGFLRFFLDYGFLTYFPLFLVRTHGISTATAGVLYVFFAIGAMMTSSQAGRI
                     AAGRDKANILFLAFVVSGASVLAVPFIPGVWLIGGALFFYGLANGVISPMQKSLLTQN
                     APAELRGGIVSFDRLIQQVSKTTSTSIVGLLLVSAELPTIFWMLGILSVISVALMALL
                     LPRSAKILPTPTYTS"
BASE COUNT          412 a          491 c          537 g          358 t
ORIGIN      
        1 aacatcgccg cggcggcaat tctccatgca gggcatcgtc accataatct caacatgcgc
       61 ggcgcgttcc tgcatgtcat gagcgatgcc atcggttcgc tgggcgccat cgccgccggc
      121 gcgatcattc tggcgaccgg ctggtatctc gccgatccgc tgatcagtat tttcatcggc
      181 gcattgatcc tgtttacgtc ctggagtttg gtgaaggatt cgctcagcgt gctcatgcag
      241 tcggtgccca aaggtattga cctcgatgag gtgcgccaga ccatcgaggc ggtggccgga
      301 gttaacaagg ttcacgatct ccatgtgtgg gcggtgacct cggatatcta cacgctgagc
      361 gcccacgcag tggtcgagaa cggcggcgac tttcatcagg tactgaacgg catcgaggat
      421 accttgaaag agcgcttcaa tatcgagcac acgaccatcc aattggaaac cgagagccgc
      481 gaagacaaag agttcaagga cttctagttc ttggttcgcc tagctttgca ggcatttcca
      541 cgaaaccgcc gattctcata ccagttgttg tcgcgtgttg atcttcgcct aattgggcta
      601 ttcgctgcac caagcctttg gcaatcgcgg cgaatttgtg atctccggta tcatcgagcc
      661 ggacgatatt cacgtcggtt ccaaggtcgg cgggcgggtc cataaaagcc gccgccatgc
      721 gtggtcaggt ggtcacagct ggcgaacact cgtgaggcga agctctggtg gcattgcggc
      781 tctgtggcat gaggcgctga tgctggcggg cttcgtgatg tttttcatgg tcttgcgtgt
      841 gcgccgcttc aagaaacagt tgggcgagtc cgctctttgc tcggaatttc aaattccaga
      901 tttcaaaccc ggtgatggat cctcaggatg tataggtcgg ggtcggcagg attttggcgc
      961 tgcgcggcag gagcagcgcc atcagggcga cgctgataac cgacaaaatt cccaacatcc
     1021 aaaagatcgt cggcagctcg gcgctcacca acaacaggcc gacgatggac gtcgaggtgg
     1081 ttttagaaac ctgctggatc aagcgatcga aggagactat gccgccgcgc aattccgccg
     1141 gcgcgttttg cgtgagcagg ctcttctgca tgggcgagat tacgccattg gcgagaccgt
     1201 agaaaaacag cgcgccgccg atcagccaga cgccgggaat aaacggcacc gccaacaccg
     1261 acgcaccgct gacgacaaaa gccaggaaca aaatattcgc tttgtcgcgg ccggcggcta
     1321 tacgcccggc ctggctcgat gtcatcatgg cgccaatggc gaaaaagacg tagagcacgc
     1381 cggcggtggc ggtggaaata ccatgggtgc gcaccaggaa cagcggaaag taagtcagaa
     1441 aaccgtagtc gagaaaaaag cgcagaaagc cggcggtgaa cgcaatcata agacgggggt
     1501 ggcgcgtcag gcgcaggaca tcgcctaagt agccggtggc gcgctgtttg ctcttacttt
     1561 gggtctcggg catgcaaaag agcgcgatca accccagcgg tatcgccaat acgtaaaaca
     1621 caaacggcca gaaccaagcg atggtcgcca ggagtccgcc caacggcgga aagataaagt
     1681 aaccgatgcg gtcgagaaac acttttagac cttggccgct aatttctttg tcgccctcca
     1741 atagatcgcc gatcaagacg atggtgagcg ggatcacggc ggcaaagccg atgccctg
//
LOCUS       DATIRS010000389         1987 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1013640, whole genome shotgun sequence.
ACCESSION   DATIRS010000389 DATIRS010000000
VERSION     DATIRS010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1987)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1987)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1987
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1013640"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(176..>1987)
                     /locus_tag="VLM90_04860"
     CDS             complement(176..>1987)
                     /locus_tag="VLM90_04860"
                     /inference="COORDINATES: protein motif:HMM:NF014073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HSQ12321.1"
                     /translation="ACVAILLPFIYTLDVHTAMILLVGSLAVVHTSDTITSVLIGTPG
                     SAAAAATILDGHPLAKQGQAGRALSAAFLSSLIGGLIGAVFLTLSLPIARPLVLLFGS
                     PELLMLCVLGLSFAGFLTGGAPLKGGLAACLGLLLGSVGAAPADAVDRYTFGQLYLVD
                     GIPLAGVALGIFGIAEIVGLLAKGGQIAERIPLGGGWLLGVKDVIENWGIVVRGALIG
                     VWAGILPGIGATAGSWMAYGHVVAMARDREKFGKGDIRGVIGPESANNSVEAGDFIPT
                     LLFSVPGGAPSAIVLGALYFYGIQPGPRMVQENLDLIFTIIWSFAIANTVGAALCLFL
                     SPALARLTWFPFAKLAPAVVVTIFFGAFQSSQQFGDIYAMLGLGLLGWLMKQLGWPRA
                     PFLVGFVLTKPTEQYLWLSIERYGFDWLWRPGVIVMGILLLASIVWIVRHRLSGNNIA
                     GEESGEDAVLLGKLPSVLFTILVLAVSAAALYEAQEFPYLGAIFPMAATIPAIFMAAA
                     QIVLEVRATAQAPAAETGKKTKLALGYLFSFVVYLLLILLFGFGIATALFTFGFLYSL
                     VRTGWFTAAIYTGVLVGVTLVMSWLLNMYWPEGILLG"
BASE COUNT          491 a          608 c          592 g          296 t
ORIGIN      
        1 cgctacttgc atgagcgcta gtctaccttc tgatcacaat ccaaaaccaa agcgttgcat
       61 gagtccttac gcttgagcgt gcgccaccgc tcggcgatgg tagcggagcg cgcgcgtgtg
      121 gcgcctatgc cgccgccgat cacttaaacg tcgacgggtg cgcgagaatt taccattatc
      181 cgagcaggat accttccggc caatacatgt tgagcagcca gctcatgacc aaggtcacac
      241 cgaccaaaac accggtatag atagcggcag taaaccagcc ggtgcggacc aagctgtaaa
      301 gaaaaccgaa ggtgaaaagc gcggtggcga tgccgaagcc gaaaagcagg atcagcaaga
      361 gatacacgac aaatgagaaa agatacccca gagccaactt ggttttcttt ccagtctccg
      421 ctgccggcgc ttgcgccgtt gcgcgcactt cgagaacgat ctgcgccgcc gccatgaaaa
      481 ttgccggaat cgtcgccgcc atcgggaaaa tcgcgccgag gtaggggaac tcctgcgcct
      541 cataaagcgc tgccgcggag accgctaaga ctaaaatcgt aaacagcacc gacggcagct
      601 tacccaagag caccgcgtcc tcgccggact cctcgccggc gatgttgttg ccgctaagtc
      661 gatggcggac gatccagact atggaagcga gcaacaggat acccataacg atgactccgg
      721 gacgccacag ccaatcgaag ccatagcgtt caatcgatag ccacagatat tgttcggtcg
      781 gcttggtcaa aacgaagccg acgaggaaag gcgcgcgtgg ccatcccaac tgtttcatga
      841 gccagccgag cagtcccaat ccgagcatgg cgtagatatc gccgaactgc tgggagctct
      901 ggaaggcgcc gaaaaaaatc gtcaccacga cggcgggagc cagctttgcg aagggaaacc
      961 aggtgagccg cgccagcgcc gggcttaaaa acagacagag tgcggcgccg acggtgttgg
     1021 cgatggcaaa gctccagatg atggtaaaaa tcagatcgag attttcctgc accattcgcg
     1081 gcccgggctg gatgccgtag aaatacaatg cgccgagcac gattgcggac ggagcgccgc
     1141 cggggacgct gaacaacagc gtcggaatga aatcgccggc ctcgacggag ttgttggcgc
     1201 tttccgggcc gatcacaccg cggatatcgc ccttgccgaa tttttcgcgg tcgcgggcca
     1261 tggcgaccac atgaccatag gccatccaag agcccgcggt ggcgccgatg ccgggaagaa
     1321 tgcccgccca cacaccgatg agcgcgccgc gcacgacgat gccccaattt tcgattacgt
     1381 ctttgacccc caggagccaa ccgcctccca gagggattcg ctcggcgatt tggccgccct
     1441 tggccaacag accgacgatc tccgcgatac caaagatccc caaggccact ccagccagag
     1501 gaatgccgtc caccagatac agctggccga aggtatagcg atcaacggca tcggcgggag
     1561 ccgcgccaac gctacccaac aagagcccca agcatgccgc cagtccgcct ttgagcggcg
     1621 cgccgccggt gagaaagccc gcgaaggaga gaccgagcac gcagagcatc aacaattcgg
     1681 gggagccgaa gagcaaaact agaggccgcg cgatgggcag ggagagagtc aaaaaaaccg
     1741 cgccgatgag gccgccgatc aatgacgaca agaatgccgc gctcaaggcc ctgccggcct
     1801 ggccctgctt ggccagcgga tgaccgtcca gaatggtcgc cgcggccgcg gcggaacccg
     1861 gcgtgccgat cagcaccgag gtaatggtat ccgacgtgtg gactaccgcg agcgatccga
     1921 ccaacaggat catcgccgtg tgaacgtcga gcgtatagat gaacggcagc aggatggcga
     1981 cgcaggc
//
LOCUS       DATIRS010000390         2074 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1897783, whole genome shotgun sequence.
ACCESSION   DATIRS010000390 DATIRS010000000
VERSION     DATIRS010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2074
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1897783"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1719
                     /locus_tag="VLM90_04865"
     CDS             <1..1719
                     /locus_tag="VLM90_04865"
                     /inference="COORDINATES: protein motif:HMM:NF013784.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016638 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase-related protein"
                     /protein_id="HSQ12322.1"
                     /translation="KISQGAKPGEGGQLPGHKVDEVIARLRHATPGVGLISPPPHHDI
                     YSIEDLAQLIFDLKNGNPRAAVSVKLVSEVGVGTVAAGVAKAHADLVLISGHDGGTGA
                     SPQTSIKHAGLPWELGLAETHQTLVLNNLRSRIAVETDGQLKTGRDVVIAALLGAEEF
                     GFATTALVTLGCIMMRVCHLDTCPVGVATQNPELRAKFAGDPQYVVNFMRFIAQEMRE
                     HMAELGFRTINEMVGRADRIEMRRAVAHLKAQGMDYSAILYQPKVGAEVGRYCQIPQN
                     HGLENALDNQVLLDLAAPALERKEKVKATLDIRNTNRVVGTILGSEVTRRYGPQGLPE
                     DTIHFHFQGSAGQSFGAFIPPGVTLELEGDANDYFGKGLSGGKVVLYPPEDSTFAPEE
                     NIIVGNVAFYGATNGEAYIRGMAGERFCVRNSGVRAVVEGVGDHACEYMTGGRLVVIG
                     KTGRNFAAGMSGGIAYVLDEDGTLKNRCNLETVSLEPLDQRDLQEVEELLKRHAVYTH
                     SARAWQLLALWQETAPKFVKVMTKDYRRVVEALQAAEAQGLVGDDALMAAFEANKNDA
                     SRVSGN"
BASE COUNT          439 a          587 c          653 g          395 t
ORIGIN      
        1 aaaatctcgc agggcgccaa gcccggcgaa ggcgggcaac tgccgggaca taaagttgac
       61 gaagtaatcg cccggctgcg gcacgccacc ccgggggtgg gattgatttc tccgccgccg
      121 catcacgaca tttattcgat cgaggatctg gcgcagctca tcttcgatct caagaacggc
      181 aacccgcgcg ccgccgtgtc ggtgaagctc gtttccgaag tgggagtagg gaccgtggcg
      241 gcgggcgttg cgaaggccca cgccgacctg gtcctgatca gcggccatga cggcggcacc
      301 ggcgcttcgc cgcagacaag catcaaacac gccggtttgc cgtgggaact tggtttggcc
      361 gagacgcatc aaacccttgt gctcaataat ctgcgcagcc gtatcgccgt ggaaaccgat
      421 ggccaattga aaaccggccg cgatgtcgtg atcgccgcat tgctcggcgc cgaggagttt
      481 ggctttgcca ccacggcgct ggtgacattg ggttgcatca tgatgcgggt gtgccatctc
      541 gatacttgtc cggtgggtgt ggcgacgcaa aatcccgagc tgcgcgccaa gttcgccggc
      601 gatcctcagt atgtcgtcaa cttcatgcgc ttcatcgctc aagaaatgcg cgagcatatg
      661 gccgagctgg gttttcgcac gatcaatgaa atggtcggcc gcgccgaccg catcgagatg
      721 cgccgtgccg tcgctcattt gaaagcgcaa gggatggact actcggcgat actttatcag
      781 ccgaaggtag gtgccgaggt cgggcgctac tgtcagatcc cgcagaatca cggcttggaa
      841 aacgcgctgg acaatcaagt gctgctcgat ctcgcggcgc cggccttgga gcgcaaggaa
      901 aaggtcaaag ccacgctcga tattcgcaac accaaccggg tcgtcgggac gattctcggc
      961 agcgaagtga cccgccgtta cggtccccag ggtttgcccg aggacaccat tcattttcat
     1021 tttcaggggt ccgccggaca aagctttggc gcatttatcc ccccaggggt gaccctcgaa
     1081 ctggagggcg acgccaacga ttatttcggc aagggcttgt ccggcggcaa ggtcgtgctc
     1141 tatccgccgg aggattcgac cttcgcgccc gaggaaaaca tcatcgtcgg caatgtcgcc
     1201 ttctacggtg cgaccaacgg cgaggcctac attcgcggca tggcgggcga gcgtttttgc
     1261 gtgcgcaaca gcggcgtgcg tgccgtggtc gaaggggtcg gcgaccatgc ttgtgagtac
     1321 atgaccggcg ggcggctggt cgtgatcggt aaaaccggcc gcaacttcgc cgccggcatg
     1381 tccggcggca tcgcctatgt cctcgacgaa gatggcacgc ttaaaaaccg ctgtaacctg
     1441 gagacggtga gtttagaacc cctagaccag cgtgacttgc aagaagtaga agagctgctc
     1501 aagcgccacg cggtctatac tcatagcgcg cgggcgtggc agctcttggc gctgtggcag
     1561 gagaccgcgc ccaagtttgt caaagtcatg acgaaggatt accggcgtgt ggtcgaggcg
     1621 ctgcaagcgg ccgaggctca gggactggtg ggtgacgatg cgctgatggc ggcgttcgaa
     1681 gccaacaaga acgatgcatc ccgggtgagc ggcaactgat ccgcaaggat gagaagcaga
     1741 caagacccga aacttgaaag cggcgccgcc gaccgaaaca aatcccgatg gcccaaagtg
     1801 cctcttcaac gttctaaacg gctccgttgc ggatttcgaa tttttttcgc cggcatatcg
     1861 gtgcggtaaa ttttttagat cgctctggtt aacacttctg ctttgagaaa gagaagattg
     1921 agagatgggt aaaccaaccg ggttcatgga gatcgcgcgc gagctgccgc aggatcgttc
     1981 gccactggag cgggtaaaag actggaatga gttccacgag catttccccg aagcgaagct
     2041 acaacaacag ggcgcgcgct gcatggactg cggc
//
LOCUS       DATIRS010000391         1751 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_128211, whole genome shotgun sequence.
ACCESSION   DATIRS010000391 DATIRS010000000
VERSION     DATIRS010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1751)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1751)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1751
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128211"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1751
                     /locus_tag="VLM90_04870"
     CDS             <1..>1751
                     /locus_tag="VLM90_04870"
                     /inference="COORDINATES: protein motif:HMM:NF019344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSQ12323.1"
                     /translation="GLAQRIVRGDVPESLKNRRLIVLDMGVLIAGAKFRGEFEERLKA
                     VLKEVQESAGDVILFIDELHTVVGAGAAEGAMDASNLLKPMLARGELHCIGATTLDEY
                     RKYVEKDRALERRFQPVLVDQPNVEDTISILRGLKERYEVHHGVRIKDAALVTAAVLS
                     HRYISDRFLPDKAIDLVDESAAKLRTEIDSMPTELDEVSRRVMQLEIEREALRKETDQ
                     PSRERLAKLESEVAGLKAEQGQLRARWEVEKQGIDRLKTLKQEIEKNKLAMAQAERDY
                     DLNRMAELKYGKLVQLERELATEEERLRQSGGRQLLKQEVDEDDIASVVARWTGIPVS
                     RLLEGEKEKLLRLPEHLHKRVVGQEEAVDAVADAVVRARSGLKDPNRPIGSFIFLGPT
                     GVGKTELGRALAEFLFDDENNMVRLDMSEYQEKHTVARLIGAPPGYVGYEEGGQLTEA
                     VRRRPYAVVLFDEIEKAHQDVFNVLLQILDDGRLTDGHGRTIDFKNTVVIMTSNVGSH
                     LIANYRGRDDAAAFAPMRAQVLDALRREFRPEFLNRVDEIVVFHNLSREHLKAITDIQ
                     LRRLQQSLDERHIALQMT"
BASE COUNT          374 a          508 c          566 g          303 t
ORIGIN      
        1 ggtttggcgc agcggattgt ccgcggcgat gtgcccgaga gtctcaaaaa tcgccgcctg
       61 atcgtgctcg acatgggcgt gctcatcgcc ggcgcaaagt tccgcggcga gttcgaggaa
      121 cgactgaagg cggtgctcaa agaagtgcag gagtccgcgg gcgatgtgat tctgttcatc
      181 gacgagttgc atacggtggt cggcgccggc gcggcggaag gcgccatgga tgcatccaac
      241 ttgctcaagc cgatgttggc gcgcggcgag ctgcactgca ttggcgcgac cacgttggat
      301 gagtaccgca agtatgtcga gaaggaccgc gcgctggagc ggcgtttcca accggtgctg
      361 gtcgatcagc ccaatgtcga ggataccatt tcgatattgc gcggcctcaa ggaacgctac
      421 gaagtgcacc atggcgtgcg catcaaggat gcggcgctgg tgacggccgc ggtcctgtcc
      481 catcgctaca tcagcgaccg ttttctgccg gacaaggcga tcgatctggt cgacgaatcg
      541 gcggccaagc tgcgcaccga gatcgactcc atgcccaccg agctggacga ggtctcgcgc
      601 cgggtcatgc agctggagat cgaaagggag gcgttgcgca aagagaccga tcagccttcg
      661 cgcgagcgct tggccaagtt ggaaagcgag gtggcgggat taaaagccga acagggccaa
      721 ttgcgcgctc gctgggaagt ggaaaagcag ggtatcgacc ggctcaaaac tctcaaacaa
      781 gagatcgaaa aaaataaact cgccatggcc caggccgagc gggactacga cttgaaccgc
      841 atggccgagc tcaagtacgg caagctcgtc caactcgagc gagaactggc gaccgaggaa
      901 gagcgcttgc gccagagcgg cggcaggcaa ctgctcaagc aggaggtcga cgaagacgac
      961 atcgcatcgg tggtcgcgcg ctggaccggc atcccggtat cgcgcttgct cgaaggcgaa
     1021 aaggaaaaac tgcttcgtct gcccgagcac ctgcacaagc gcgtcgtcgg ccaggaggaa
     1081 gcggttgacg cggtggccga cgcggtggtg cgcgcccgct ccgggctcaa agatcccaac
     1141 cggccgatcg gctcgtttat cttcctgggt cccaccggcg tcggcaagac cgagctcggg
     1201 cgcgccctcg cggaatttct cttcgacgat gaaaacaata tggtgcgcct cgacatgtcg
     1261 gaatatcagg agaagcatac cgtggcgcgg ctgatcggcg cgccgcccgg ttatgtcggt
     1321 tacgaagaag gcgggcaact caccgaagcg gtgcggcgcc gtccctacgc cgtcgtgtta
     1381 ttcgatgaaa tcgaaaaggc gcaccaggat gtgttcaacg tcttgctgca aatcctcgat
     1441 gacggacggc tcaccgacgg ccatgggcgc accatcgatt tcaagaacac ggtagtgatc
     1501 atgacttcca acgtcggcag tcatttgatc gccaactacc gcgggcggga cgatgcggcg
     1561 gcgttcgcgc ccatgcgcgc ccaggtgctc gacgcgctca ggcgcgagtt tcggccggag
     1621 ttcttgaacc gtgtcgacga gatcgtcgtg ttccacaatc tgtcgcgtga acacctcaaa
     1681 gcgatcaccg atattcaact gcgccggctg caacagagcc tcgatgaacg tcatatcgct
     1741 ttgcagatga c
//
LOCUS       DATIRS010000392         1734 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_620679, whole genome shotgun sequence.
ACCESSION   DATIRS010000392 DATIRS010000000
VERSION     DATIRS010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1734)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1734)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1734
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_620679"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..494)
                     /locus_tag="VLM90_04875"
     CDS             complement(<1..494)
                     /locus_tag="VLM90_04875"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ12324.1"
                     /translation="MIKLAISFVLLITMPSPASAQTMAQIVEGAKAEKELLTYATTQA
                     PVMNRLVQGFNKKYPFIKVEYYRAGAEKIAQRFDTEAAAGRHVVDVVNLSGSEMYWTA
                     KKGHFAVYDSPERKAIRPSYKDKQGLWTAQYSTIAVIGYNRKLVAPADVPKSYDDMLL
                     PKWKG"
     gene            1064..>1734
                     /locus_tag="VLM90_04880"
     CDS             1064..>1734
                     /locus_tag="VLM90_04880"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HSQ12325.1"
                     /translation="MLDLGGPLSLHCTKLLADMGAYVIKIEAPAGDESRRVPPFKDDQ
                     PHPEKSLYFLHFNTNKRGITLDVEKPDGRAILLELCKKADVIIETFRPSRAKELALTY
                     ADLSAVNPKLIVASITPFGQNGPWKDYKANDMAGIALGNLLYLAGEPGEPPLQPPGEI
                     AYGMASTYGAFGIAVALYHRLDSGKGQHIDVSMHECGGHIAGYFIPNYGYTGDKPARA
                     SRKGE"
BASE COUNT          391 a          542 c          432 g          369 t
ORIGIN      
        1 cccttccatt tcggcaacag catgtcgtca taactcttcg gcacgtcggc cggcgccacc
       61 agcttgcggt tgtaaccgat caccgcgatg gtcgagtact gcgccgtcca taaaccctgc
      121 ttgtctttat aacttggacg aatcgccttt ctttccggcg aatcgtaaac cgcgaagtgg
      181 cctttcttgg ccgtccaata catctccgag ccactcaagt tgacgacatc gacgacatgg
      241 cgcccggcgg ccgcctcagt gtcaaaacgc tgggcgatct tttccgcgcc ggcgcggtaa
      301 tactcgactt tgataaacgg atatttttta ttgaatccct gcaccaatcg attcatcacc
      361 ggcgcctgag tggtcgcgta agtcaaaagc tccttctccg ccttggcccc ttcgacaatc
      421 tgcgccatgg tctgggccga ggccggcgat ggcattgtaa tcaacaacac gaacgagatg
      481 gcaagcttga tcatggtttc actcctgtcg gtcacgatac taaccaagcg atcagcagtt
      541 tgtaaacccc aaaaaaactt ctgatcgcga agacgcatgg cacaccgagc ggattcattc
      601 taatctaacc tctgcgtgct ctgtactgat atctgtgaac acttgcgctg cgtgcgcaaa
      661 ttttcgctga ctagagcgtc tcgaattcgg acagtcctcg cgccaaggtc gccaaggtcg
      721 ccaagtgaca ggccagaagc ctgtcatccc gagcaaatac gagggatcta agaaggattt
      781 ctctctgcgt tcgaaatgac aatcttcttc cttcgcgccc tttgcgtgct ttgcgcgaga
      841 cgttccgcgt ttcgcttgcg gctctgtcgc accgggcctc tgtgatgaat ccgaatttac
      901 ccgaaactaa tcaaaatccg aaacccaaga cccgaaactc gaaactgcag ccccgtgcct
      961 tgacacccca ctttcatcca cgtaagaatc tcgacgtatc aatttacatt tcgctctgag
     1021 gaatttcatg gcaacaccaa caggaccgtt gaccggctaa cgcgtgctcg atctgggcgg
     1081 gccgctgagt ctgcactgca ccaagctctt ggccgacatg ggcgcctatg ttatcaagat
     1141 cgaagcgcct gccggcgacg aatcgcgccg cgtgccgccg ttcaaagacg accagccgca
     1201 tccggaaaag agtctgtact ttcttcactt caacaccaac aagcgcggca tcacgctcga
     1261 cgtcgagaag cccgacggcc gggcgatcct gctcgaactt tgcaaaaaag ccgacgtgat
     1321 catcgaaacc tttcggccat cgcgcgccaa ggaattggct ctgacctacg cagatctcag
     1381 cgcggtcaat ccgaaattga tcgtcgcctc gatcaccccc ttcggccaaa acggcccatg
     1441 gaaagattat aaagccaatg acatggccgg catcgcgctg ggcaacctgc tttatctcgc
     1501 cggcgaaccg ggcgagccgc cgctgcagcc gccgggagaa atcgcctacg gcatggcgtc
     1561 gacctacggc gccttcggca tcgccgtggc gctctatcat cgcctcgaca gcggcaaagg
     1621 ccagcatatc gacgtgtcga tgcatgaatg cggcggccat atcgccggct atttcattcc
     1681 caactacggt tacaccggcg ataagccggc gcgggcatcg cgcaaaggcg aaga
//
LOCUS       DATIRS010000393         1547 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_424103, whole genome shotgun sequence.
ACCESSION   DATIRS010000393 DATIRS010000000
VERSION     DATIRS010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1547)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1547)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1547
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_424103"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1008
                     /locus_tag="VLM90_04885"
     CDS             <1..1008
                     /locus_tag="VLM90_04885"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HSQ12326.1"
                     /translation="VYFGSNDVPVDLLKPILAEIDADMTIRRPTTDAEVIEMAKDADG
                     IIMHGSVPLSREIISQLKRVKVVCRTGVGVDRMDLKAAADHGLIICNAAGCNSIEVAE
                     QAIGLMIAISRKLVRMNQYVHDGKWKRHTAELHAYRGRVYRIQGCTMGIVGLGHVGKQ
                     VAPRAQGMRLNVQTFDPYLDPKVAEQMNVKMVAFDELVKTSDFISVHAPLTKQTRHMF
                     GMPQFKMMKKSAYLINCARGGLVDTDALYDALVAGELSGAALDVTDPEPLPADHKILT
                     LPNVIVTCHTSANSDESYVDCQSHAAREVVGVLSGRGPTTQIKDPWLLAEAQDEGFGG
                     V"
     gene            1080..1388
                     /locus_tag="VLM90_04890"
     CDS             1080..1388
                     /locus_tag="VLM90_04890"
                     /inference="COORDINATES: protein motif:HMM:NF037100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HSQ12327.1"
                     /translation="MIETRFPISKNQIADFCRRHYVRKLSLFGSLLREDFNAESDVDV
                     LLEFEPGAKVSFFKLYDLEQELSQLLGGRRVDINTPKSLSKHFRDQVLAEAEILYVQA
                     "
BASE COUNT          362 a          452 c          420 g          313 t
ORIGIN      
        1 gtgtattttg gcagcaacga tgtgccggtc gatctgctca agccaatcct ggccgagatc
       61 gacgccgaca tgaccatccg ccgcccgacc accgacgcgg aagtgatcga aatggccaag
      121 gatgccgacg gcatcatcat gcacggttcg gtgccgctgt cgcgcgagat catctcccag
      181 ttaaagcgcg tcaaagtcgt ctgccgcacc ggcgtcggcg tcgacagaat ggatctcaag
      241 gccgccgccg atcacggcct gatcatctgc aacgccgccg gctgtaactc catcgaagtc
      301 gccgagcaag cgatcggctt gatgatcgcg atctcgcgca aactcgtgcg catgaaccaa
      361 tatgtccacg acggcaagtg gaaacgccac accgcggaac tgcacgccta ccgcggccgg
      421 gtttatcgaa tccaaggctg caccatgggc atcgtcggcc tgggccatgt cggcaaacaa
      481 gtcgccccgc gcgcccaggg catgcgcttg aatgtgcaaa ccttcgatcc ctatctcgat
      541 cccaaagtag ccgaacagat gaatgtgaaa atggtcgcct tcgatgagtt ggtaaagact
      601 tccgatttca tcagcgtcca cgcgccgttg accaaacaga cccgtcacat gttcggcatg
      661 ccgcaattca agatgatgaa aaagagcgcc tatctgatca actgcgcccg cggcggcctg
      721 gtcgacaccg acgcattata tgacgccctg gtcgccggcg aactctccgg cgccgcgctc
      781 gacgtcactg atcccgaacc gttacccgcc gatcacaaaa tattgacgct gcccaacgtc
      841 atcgtcacct gccacacctc ggccaactcc gacgaatcct acgtcgattg ccagtcccac
      901 gccgccaggg aagtcgtcgg cgtattgagc ggccgaggcc caacgacgca gatcaaagac
      961 ccctggttgt tggccgaagc gcaggatgag ggatttggcg gagtgtgatg taaattcgtc
     1021 gcgaattcag aaggtcgttg tggtaaatta gcaaagcaat gactagtgct gagcgatcgg
     1081 tgattgaaac gagatttccg atatcaaaaa atcagatcgc tgatttttgt cggcgccact
     1141 acgtccgcaa gctttcgctg tttggctcgt tgttacgcga ggattttaac gccgagagcg
     1201 acgtggatgt tttgcttgaa tttgagccag gtgccaaagt gagctttttt aagctctatg
     1261 atctggagca ggaactatcg caacttctgg gcggccgtag ggtcgatatc aacactccca
     1321 aatcattaag caaacacttc cgcgaccagg tccttgcgga ggcggagatc ctctatgtcc
     1381 aggcgtgacc cgcaggttcg cctcaaacat atgctggatt acgcccgcga ggccgttgag
     1441 atggctatgg gcaatacagc aataaatctg gacaaagacc ggaaacttgc tttggctcta
     1501 actcacttgg tcgagttgat cggcgaagcg gcaagccaaa tgcccca
//
LOCUS       DATIRS010000394         3859 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_620729, whole genome shotgun sequence.
ACCESSION   DATIRS010000394 DATIRS010000000
VERSION     DATIRS010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3859
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_620729"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..204
                     /locus_tag="VLM90_04895"
     CDS             <1..204
                     /locus_tag="VLM90_04895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12328.1"
                     /translation="KSLIADARKFATQMPINDKRAGDKEVSGAFKSKSGLKSQLETEW
                     ENAARGNYSKAKELAEKALSMAK"
     gene            355..2061
                     /locus_tag="VLM90_04900"
     CDS             355..2061
                     /locus_tag="VLM90_04900"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HSQ12329.1"
                     /translation="MALTTTAVTAPPRQRIDWWQGGIMAMLLAILTAFILYPVLRVLW
                     ISVTDDESSFTLIHFGNFFRRPLFREALWNTLSSGFLVVVFSALLALPLAYVLARYEF
                     RGKLLLQTAATLPLVIPPFVGAVALQLILGRSGMVNLLLRDWFDISIPFMEGLTGVVL
                     VQTLHFFPFILLNTVVSLSNIDASLEEMAQNLGCHGFRLFRRVTLPLMLPGFIAGALL
                     TFIRAIDDLGTPLMLNYKNLLAPQAYLRITTIGMDDVDGYVVCVVLVVLSMVTLLAAR
                     KYLSLAEYATVQRAAPISRQLQGKHLALVWLVIAVILGISLLPHIGIVLLSFAKVWSF
                     SLLPTTYTLSHYEEILFRVPHFVINTLIYTLLAAALDIILGAAIAFLLLRTGVPGRNL
                     LDAIATMPLAIPGVVLAVGYLRVFHGWDFPGLGAPLTSSWIILVVAYTMRRLPYTVRA
                     CYAALQQVHITLEESAQNLGANRFRTFVKITLPMISGGLVAGGLIAFVTSCVELASTI
                     MLVPRIELGPISYGIYLYMQSPLGRGAGAALGVVAILLVSLGTYLTHRVFGARAGSAF
                     RV"
     gene            2064..3161
                     /locus_tag="VLM90_04905"
     CDS             2064..3161
                     /locus_tag="VLM90_04905"
                     /inference="COORDINATES: protein motif:HMM:TIGR01187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ12330.1"
                     /translation="MKAAQVRLENIGKRYGEQWVVRDVNLQIQAGDFFTFLGPSGCGK
                     TTLLRMIAGFAIPDQGSIHLDDQEVSRMPPWQRDIGMVFQNYALWPHMTVFENVAFGL
                     RERKIPRGEIVSRVHQALATVDLQGRESHRPSQLSGGQQQRVALARILVIQPRVLLLD
                     EPLSNLDARLRVEMRLELLKLQRDLGLTTIYVTHDQEEALAMSTKIAVMNRGQVVQVG
                     PPRKIYEQPIDNFVAAFVGQANLLAGKIRSRSDHACAVDIGDGNVVQTHAAAATFQAG
                     DAVWLSLRPEAVELLPRGTERLSVNALEGKIITAAYQGAVVEYEVSAAATILKVRVAN
                     SQGQTLYQRGDEVSLSFTPEAVTCLIGSSDK"
     gene            complement(3200..3601)
                     /locus_tag="VLM90_04910"
     CDS             complement(3200..3601)
                     /locus_tag="VLM90_04910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12331.1"
                     /translation="MEKEQSMPKKSDPVVIEAAGMRIWVDYRRGIGGDEGLTFDVTVA
                     GEEDGARILRFDCFSKTPHYHVGASPKNPVHDMIAEGITDPVRWTLDQLKTRLPSMVA
                     EAGYDDLAKAIDQQAIAQSLSRVEPDIFAKL"
BASE COUNT          729 a         1227 c         1056 g          847 t
ORIGIN      
        1 aaatcgctga tcgccgacgc gcgcaaattc gcgacccaaa tgccgatcaa cgacaagcgc
       61 gccggcgaca aggaagtcag cggcgccttc aagtccaagt ccggcctcaa atcccagctc
      121 gaaaccgaat gggaaaatgc cgcccgcggc aactacagca aagccaaaga gctggcggaa
      181 aaagccctga gcatggcgaa atagtttcaa cgacgagaaa gcaaatcgga tttcctcccg
      241 caaaggcgca aagacgctaa gttcggaaaa taaaatttcc ggggagcaat tctccctcgt
      301 tctccgaact ttgcgagctt tgcgcctttg cgggagatat tccgggactg acccatggcg
      361 ttaaccacaa ccgcggtcac tgcaccgccg cgccaacgca tcgactggtg gcaaggcggc
      421 atcatggcga tgctcctggc catcctcacc gcgttcattc tctaccccgt gctccgggtc
      481 ctgtggattt ccgtcaccga cgatgaaagc agttttactt taattcactt cggcaacttt
      541 tttcgccggc cgctgtttcg cgaggccctg tggaacactt tgtcgagcgg ctttctcgtc
      601 gtcgtcttta gcgcgctcct ggctttgccg ctggcctatg tgctggcgcg ctatgaattt
      661 cgcggcaagc tgctgctgca aaccgccgcg actctgccgt tggtgattcc gcctttcgtt
      721 ggcgcggtgg cgctgcaatt gattttaggg cgcagcggca tggtcaacct gctgctacga
      781 gactggttcg atatttcgat cccgttcatg gaagggctca ccggcgtcgt tctggtgcag
      841 acgctgcact tttttccatt catactgctc aacaccgtgg tgtcgctgtc gaacatcgac
      901 gcgtccctcg aagagatggc gcaaaatctc ggctgccatg gctttcgcct gttccgccgg
      961 gtgactttgc cgctgatgct gccgggcttc atcgccggcg cgcttctgac gttcatccgc
     1021 gccatcgacg acctcggcac gccgctgatg ttgaactaca aaaatctcct ggcgccccag
     1081 gcgtatctgc gcatcaccac catcggcatg gacgatgtcg acggctatgt cgtctgcgtc
     1141 gtgttggtgg tgctttcgat ggtaacgctc ttggcggcgc gcaaatactt gagcctggcg
     1201 gaatacgcca cggtgcagcg cgccgcgccg atctcgcgtc aattgcaagg caagcatctc
     1261 gcgctcgttt ggctcgtcat cgcggtcatc ctcggcatta gcctcttgcc gcacatcggc
     1321 atcgtcctgc tgtcgttcgc caaggtctgg agcttttcgt tgttaccgac gacctatacc
     1381 ctcagccatt acgaagaaat cttgtttcgc gtgccgcact tcgtcatcaa taccttgatc
     1441 tacacgctgc tcgccgccgc cctcgacatc atcctcggcg ccgccatcgc ctttctatta
     1501 ctgcgcaccg gcgtgccggg gcgcaacctt ctcgacgcca tcgcgaccat gccgctggcg
     1561 attcccggcg tggtgctggc ggtcggctat ttgcgcgtgt tccacggctg ggacttcccc
     1621 ggtctcggcg cgccgctgac ctcgtcgtgg atcatcctcg tagtcgccta taccatgcgc
     1681 cgcctgccct acaccgtgcg cgcctgctac gccgcgttgc agcaagtcca tattaccctc
     1741 gaagagtcgg cgcaaaactt gggcgccaac cgcttccgca ccttcgtgaa aatcaccttg
     1801 ccgatgatca gcggcggcct ggtcgccggc gggctgattg ccttcgtaac ttcctgcgtc
     1861 gaattggcct cgaccatcat gctcgtgccg cgcattgaat tggggccgat ctcctacggc
     1921 atctatctct acatgcagag tccgctgggg cgcggcgccg gcgcggcgtt gggcgtggtc
     1981 gccatcctcc tggtttccct cggcacctat ctcacccacc gggtctttgg cgcgcgcgcc
     2041 ggtagtgcat ttcgggtgta accatgaaag ccgctcaagt cagactggaa aacatcggta
     2101 aacgctatgg cgaacaatgg gtggttcgcg atgtcaattt gcagatccaa gcgggtgatt
     2161 tcttcacctt cctgggcccc agcggctgcg gtaagacgac cctgttacgc atgatcgccg
     2221 gcttcgcgat cccggatcag gggtcgattc acctcgacga ccaggaggtc agtcgcatgc
     2281 cgccatggca gcgcgacatc ggcatggtgt ttcagaatta cgctctctgg ccgcacatga
     2341 cggtgtttga aaacgtcgcc ttcggcctgc gcgagcgcaa aattccccgc ggcgaaattg
     2401 tcagccgggt gcaccaagcc ttggcgaccg tcgacctcca gggccgcgag tcgcaccggc
     2461 cgtcgcaact ctccggcggc cagcaacagc gcgtcgccct ggcgcgcatc ctggtgattc
     2521 agcccagggt tctattgttg gacgaaccgc tgagcaatct cgacgccagg ctgcgtgtcg
     2581 aaatgcgcct ggaattattg aagctgcaac gcgacctcgg tctgaccacg atctatgtca
     2641 cccacgatca ggaagaggcg ctcgccatgt cgacaaagat cgccgtgatg aatcgcggcc
     2701 aagtcgtcca agtcggcccg ccgcgcaaga tctatgagca gccaattgac aacttcgtcg
     2761 ccgcctttgt cggccaagcc aatttgctcg ccgggaaaat tcgctcgcgc agcgaccacg
     2821 catgcgcggt cgatatcggc gatggcaacg tcgtccaaac ccatgccgcg gctgcaactt
     2881 ttcaagccgg cgatgccgtg tggcttagcc tgcggccgga agcggtcgaa ctattgccac
     2941 gcggcaccga gagactatct gtcaatgctc ttgagggaaa gataattacc gccgcttatc
     3001 aaggcgcagt cgtcgaatac gaagtcagcg cggcggcaac tatcctcaaa gttcgtgtcg
     3061 ccaattcgca agggcaaaca ctttatcagc gaggcgatga agtaagccta tcttttaccc
     3121 cagaggccgt cacctgcctg ataggctcca gcgataaata gcgctcccag tgagcggcgc
     3181 ccggcaagta attgcagcgc taaagtttag cgaagatatc tggctcaacc cgcgacagac
     3241 tctgcgctat cgcttgttgg tcgatggcct tggcaaggtc atcatagccg gcttcagcaa
     3301 ccattgacgg cagccgagtc ttgagctgat ccagagtcca gcgcactggg tcggtgatac
     3361 cttcggcgat catatcgtgg acggggttct tcggcgacgc gccgacatga taatggggcg
     3421 tcttgctgaa gcagtcgaag cgcaaaattc tcgcgccgtc ctcttcgccc gccacggtga
     3481 catcgaaggt caacccctca tcgccgccga tgccgcggcg gtaatccacc caaatccgca
     3541 tccccgccgc ctcgatgaca accggatcgc tcttcttcgg catagattgt tctttttcca
     3601 tggtccacgt cccttccatg tttaatgagt tactttccga gccagccgcg agacagtagc
     3661 agcctcccgg ccggttgcgc aaactcattg aatagcccta cgctttacac cgagggatcg
     3721 cgattatgtc gtctcgaagt ccgttttctc tttgtcgtta ttccgcgaac gggtaaattc
     3781 aggcctggta ttctcaacag accgccgcgc tcacttcttc gccgcatcgt agcccaggat
     3841 cggcgacagc cacctttct
//
LOCUS       DATIRS010000395         1748 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1407379, whole genome shotgun sequence.
ACCESSION   DATIRS010000395 DATIRS010000000
VERSION     DATIRS010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1748)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1748)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1407379"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            282..1463
                     /locus_tag="VLM90_04915"
     CDS             282..1463
                     /locus_tag="VLM90_04915"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12332.1"
                     /translation="MTPATTDTLWTRAFVLLCIVQFLGYAQHFVLQPTLPIYVTHLGA
                     TPFVVGLVMASFAATSMILRPLVGYWSDRWSEAGVMVSGLLIQGASVLLCYLPFVGTT
                     MIANSCRGVGWASVNSGGYALLAQSAPAARRGEASGYYSGAQGSATILLPALALWLID
                     APFGGFHVVFAVSMTIAVAGAALGLLLRERAVDTARQRRNALAGPWWREIIRIPDKDI
                     LLAAGLLFALHVSLPAVAGFLVLYARQLGIEHFGWYYVASGATSLIARPMLGQLSDKI
                     GRGAAIAAGFVLEATAFFVVVNATTLGGMIVSGVLYMTGSSMGTAATLALALQHANPE
                     RRGQVIATYSMAYPLSAGVGSLLAGGAIQIAGFSWMFIFVALLNLPGLWITWKNRASL
                     Q"
BASE COUNT          310 a          584 c          463 g          391 t
ORIGIN      
        1 cttccgtcat tccggcgcat accgtaatcc agtttatttg aattcgaacc aaaatcgaac
       61 ctggatgccg gccttcgccg gcatgacaaa ccttcgcatc acctgaagga gcgagatata
      121 aaccagcgcc gaggggaata ttagccgttt cgaaccatac acaaccagtc tcgccatcct
      181 ctatcctcta tccacgagcc agcacaaaga atttctcttt actcgcctag cgacaccgtc
      241 gcgaagcttg tataagaaca gtcggaactg actcagcttc aatgactccg gcaaccaccg
      301 acaccctctg gacccgcgct ttcgtgctgc tctgcatcgt ccagttctta ggctacgcgc
      361 agcacttcgt gctgcaaccg acgctgccga tttacgtcac gcatctcggc gcgacaccgt
      421 ttgtcgtcgg tttggtgatg gcgtcgtttg ccgccaccag catgatcctg cggccgctgg
      481 tcggctattg gtccgaccgc tggagcgaag ccggggtaat ggtctcgggc ctgttaatcc
      541 aaggcgccag cgtgttgctt tgctacctgc cgtttgtcgg caccacgatg atcgccaata
      601 gctgccgcgg cgtcggctgg gccagcgtca actccggcgg ctacgcgctg ctcgcccaaa
      661 gcgctcccgc cgcccgccgc ggtgaagcgt cgggttatta cagcggcgcc cagggcagcg
      721 cgacgattct tttgccggcc ttggcgctct ggttgatcga cgcgcccttc ggcggctttc
      781 acgtcgtctt cgcggtttcc atgaccatcg ccgtcgccgg cgccgccctc ggcctgctgc
      841 tgcgcgaacg cgccgtagac actgcgcggc aacggcgcaa cgcgctcgcc ggtccctggt
      901 ggcgcgagat cattcgaatt cccgacaaag atattttgct cgccgccggt ttactgttcg
      961 ccttgcatgt ctcgctgccc gccgtcgccg gctttctggt gctttacgcg cgccaattgg
     1021 gcatcgagca tttcggctgg tactacgtcg ccagcggcgc gacgagttta attgcccgtc
     1081 caatgctcgg ccagctctcc gacaagattg gccgtggcgc cgctatcgcc gctggcttcg
     1141 tactcgaagc cacggcattt ttcgtcgtcg taaatgccac cacgctgggc ggcatgatcg
     1201 tctcaggggt gctctacatg accggctcgt caatgggcac cgcggcgacg ttggcgctcg
     1261 ccctgcagca cgccaatccg gaacggcgcg gccaagtgat cgccacttat tcgatggcct
     1321 atccgctcag cgccggcgtc ggctcgctgc tcgccggcgg cgccatccaa atcgccggct
     1381 tcagctggat gtttatcttc gtcgccctgc tcaatcttcc cggcctatgg atcacctgga
     1441 aaaaccgcgc gagcttgcaa tgatcgtcac cggaatatct cccgcaaagc cgcaaagctc
     1501 gcaaagttcg gagaaaaaag aacggtgaaa aaatttctta gtattctctc catttcccct
     1561 ccgaacttgg cgtctttgcg cctttgcggg aggaacctcc gaatccaaaa atcttcgtgt
     1621 ccttcgtgcc ttcgtggtga gcaatcctaa tccatggcca cgccacaaac tcacaccctc
     1681 tggacgcgca cttttctctt actatgcacc gctcagttct tcggctcgtc gcagcatgcg
     1741 ctgctgca
//
LOCUS       DATIRS010000396         1721 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1407393, whole genome shotgun sequence.
ACCESSION   DATIRS010000396 DATIRS010000000
VERSION     DATIRS010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1721
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1407393"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..607)
                     /locus_tag="VLM90_04920"
     CDS             complement(<1..607)
                     /locus_tag="VLM90_04920"
                     /inference="COORDINATES: protein motif:HMM:NF014510.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diadenylate cyclase"
                     /protein_id="HSQ12333.1"
                     /translation="MLELLHQIRWQDLLDISIITFLVYRALQIVRGSRAMQMIIGLAV
                     ILVAYMSSRILGLFTLNWILDNFLSSIILVIIVIFQSDIRRALTQVGTAPLFATLERS
                     QQRYEDVVEEVAQAALSLASKRVGALVVFQRDVGLSEFMEIGTRLDAWVSRELLESVF
                     LPHSPIHDGALVIQKNRVTAVRCLLPLSTNPHLRKSWGTRHR"
     gene            complement(621..1508)
                     /gene="folP"
                     /locus_tag="VLM90_04925"
     CDS             complement(621..1508)
                     /gene="folP"
                     /locus_tag="VLM90_04925"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR01496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HSQ12334.1"
                     /translation="MGTINPLVPMVSDGSRELKMRHGRIDYARRTAVMAVLNVTPDSF
                     FDGGRHFDTGRAIADGLAMAQAGADIIDIGGESSRPAAAPVAQADELARVLPVIQGLR
                     RQCALPISIDSYKAPVARAALDAGADMVNDISALSFDPTMAQLVASEKVPVILMHMQG
                     TPRTMQIDPQYGDVVREVRDFLAERLYDAMDAGVDAEAIVLDPGIGFGKTVEHNLQLL
                     RGLSMLAALGQPLLVGVSRKAFIGRILGLEPDQRLEGSLAAAVAAVLGGANIIRVHDV
                     AATCRAVRVADALRFGFHQ"
BASE COUNT          373 a          534 c          524 g          290 t
ORIGIN      
        1 cacgatggcg cgtgccccag gatttacgca ggtgcggatt ggtgctgagc ggcagcaaac
       61 agcgcactgc ggtcacccgg tttttttgaa tcaccagggc gccgtcatga atcggcgaat
      121 ggggcagaaa gacgctttcc aacagctcac ggctgaccca agcatcgagc cgcgtgccaa
      181 tctccatgaa ttcgctcaag ccgacatccc gttgaaagac caccaaagcg ccgacacgct
      241 tgctagcgag ggataacgcc gcctgggcga cctcttcgac gacatcttcg tagcgctgct
      301 gggaacgctc cagcgtcgcg aacaacggcg cggtgccgac ctgggtaagc gcgcggcgaa
      361 tgtcgctctg aaagatcacg atgatcacca agatgatcga actcaggaag ttatcgagga
      421 tccagttcag cgtgaataac ccgaggatgc gggatgacat gtaggcgacc aaaatgaccg
      481 ccaagccgat aatcatttgc atcgcccggc tgccgcgcac gatctgcagc gcccggtaga
      541 ccaggaaagt gataatgctg atatcgagca ggtcttgcca gcggatttgg tgcagcagct
      601 ctagcattcg ggcctcgcgg ctactggtga aacccgaatc gcagcgcgtc ggcaacccgt
      661 accgcccggc aagttgccgc gacatcgtgg acgcggatga tattggcgcc gccgagcacc
      721 gccgccaccg cggcggccag actgccttcg agccgctggt ccggctcgag accgagaatc
      781 ctgccaataa aagctttgcg cgagacgccc accagcaacg gctgcccgag ggcggcgagc
      841 atcgacaggc cgcgcagtag ttgaaggttg tgctcgacgg tcttgccgaa accgatacca
      901 ggatcgagca cgatcgcctc ggcatcgaca ccggcatcca tggcgtcgta gagccgctcg
      961 gcaagaaagt ctcgcacctc gcgcacgaca tcgccatact gaggatcgat ctgcatggtt
     1021 cgcggcgtgc cctgcatgtg catcaaaatc accgggacct tttcgctggc aaccaactgc
     1081 gccatcgtcg gatcgaaact cagggcgctg atgtcgttga ccatgtcggc gccggcatcg
     1141 agagcggcgc gggccaccgg cgctttgtaa ctatcaatgg agatcggcag cgcgcactgc
     1201 cggcgcaaac cttggatcac cggaagcacg cgggccagct cgtcggcttg cgccaccggc
     1261 gcggcggcgg ggcgcgaaga ttcgccgccg atgtcgataa tgtcggcgcc ggcttgcgcc
     1321 atcgccaaac catcggcaat cgctcggccg gtgtcgaagt gacggccacc gtcaaagaag
     1381 gaatccggcg tgacgttgag caccgccatc accgcggtgc ggcgcgcgta atcgatccgg
     1441 ccatggcgca ttttcagctc gcggctgcca tccgatacca tcggcaccaa cggattgatg
     1501 gtgcccacgg tccggttcaa atctggcgga ttactttggg acatcgctgg gaccgacatg
     1561 taaaataaat agcagccaga ggcaagttaa tgccgcaatc aataaacagt tccgccggct
     1621 cggtcgcttg ccgacgccgg cgtatcgcag ctaattgggc aggtggagtt gggaaaccgc
     1681 agctccccgg aatgaaccta actaagcgac tgccgccgac g
//
LOCUS       DATIRS010000397         4376 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_424155, whole genome shotgun sequence.
ACCESSION   DATIRS010000397 DATIRS010000000
VERSION     DATIRS010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4376
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_424155"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..277)
                     /locus_tag="VLM90_04930"
     CDS             complement(<1..277)
                     /locus_tag="VLM90_04930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12335.1"
                     /translation="METVVGEFEEQAAQNFLLGFALRLAENCRAQPLANIWIPPRRFN
                     PLFTKTVHPPWHASNFTDTPGASLTESLREILNTRGWLSRDADDANPI"
     gene            complement(312..500)
                     /locus_tag="VLM90_04935"
     CDS             complement(312..500)
                     /locus_tag="VLM90_04935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12336.1"
                     /translation="MQSHRGKIATALAIVASIGAGGVSAQQPSAKKNFDAEIQAALES
                     AKTRLGSSTWAPWCGLHS"
     gene            complement(588..2531)
                     /locus_tag="VLM90_04940"
     CDS             complement(588..2531)
                     /locus_tag="VLM90_04940"
                     /inference="COORDINATES: protein motif:HMM:TIGR02123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter fused permease subunit"
                     /protein_id="HSQ12337.1"
                     /translation="MSDDLAPTTRFRILTGATALFARILLCALTLLGAFWALDVHEIM
                     EWTFFKEQYLGLFFALAMTSIFITVKARVGAADAVIPWFDWILALASLIVGGFVTVMY
                     PSIAYRLAMLSPERWLLGGAAILLILEATRRLVGWALVWITVPIILYANLAYLFPGIL
                     NAKGSSWQRIAAYLYLDSSGILGLPLDVAAGIVVAFIFFGQALYAVGGDTFLTDIALV
                     IMGRYRGGTAKVAVVSSTLFGTVSGSAVANVVVDGAITIPMMKRSGYPPHTAAAIEAV
                     ASNGGQIMPPVMGVAAFLMAEFLNISYGEVALAAAIPACLYYVALFTQIDLEAAKLGL
                     KGMPENEIPRFRQVIKRGWVFLVPLGVLVYTLMFAFWEAGKAGMAAVVTTFLVGALQK
                     DTRPTFKSILTSVEETGRILLDIVVVTALAGLVIGAFQLSGLTFKFALLLVNMAGGST
                     IALLILTAIASIILGMSLPTTVVYIMLAVLVGPALVQVGIPPLAAHLFFFYFGMLSLI
                     TPPDCIATYAAASIARADFWKSGWTGMRLGIVAYIVPFIFVFHPALLFKGSFVDIGSA
                     IVSAVIGVIFLAIGVAGFLFRPLGWTKRIIMIIAGVALIPSASTTIWLASNLCGFIVA
                     LIVVALEWKFRVPKIALSQPGVG"
     gene            complement(2702..3733)
                     /locus_tag="VLM90_04945"
     CDS             complement(2702..3733)
                     /locus_tag="VLM90_04945"
                     /inference="COORDINATES: protein motif:HMM:TIGR02122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HSQ12338.1"
                     /translation="MNRQSTIIAMFFLVLLCMQGDRVHAQKVPASTTIGSNPAGSLFY
                     SVASGLAKVISGAGPMQAIVQPYTGSSTFLPLLDIGEIDFGIVNAVDMGMAYQGQRLK
                     IGGKNPLPHSPNTRLIMRGSPLLTSLVAKKDGPVKTIADVKGKRVTGEYPAHLAVWFS
                     VFGSLATGGLTWEDVKVVPVPAVNEGIDALVQGRAEVSNHTVASAKIKEADAAIGVRF
                     VSLDCSPPGEARLKKAVPGYYLTTLKAGHSNGIIVDTCVQAYDMYLVGHKGLSNEHVS
                     AALKGIWDNVDKLAPLHPSLQEWSRERAVDPDATMAYHPAAVQFYKERKAWPAKMDEI
                     QKKMLAMNP"
     gene            complement(3795..>4376)
                     /locus_tag="VLM90_04950"
     CDS             complement(3795..>4376)
                     /locus_tag="VLM90_04950"
                     /inference="COORDINATES: protein motif:HMM:NF028178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HSQ12339.1"
                     /translation="YPANIAIWYHGYAALASAALTWDDVKVVPVPAVNDGVDAVAQGR
                     ADVSIHAIGAAKVKEADAAVGVRHVPVDCSSQGDARVRKAVPGYSTTTLKSGFSTGII
                     GDTCVLTFDIYMLGHKGLSNDVIRASLKAIWDNTDKLPPLHAQFQEWTRERAASADVT
                     LPYHPAAVQFYKEKNLWNAKMDETQKKLLAVNP"
BASE COUNT          958 a         1213 c         1344 g          861 t
ORIGIN      
        1 gaatgggatt ggcgtcatcg gcatctcgac tcagccagcc tctagtattt aggatttctc
       61 gtaacgattc tgtcagcgac gcccccggcg tgtccgtgaa attgctggcg tgccacggcg
      121 ggtgaacggt cttcgtaaac aacggattga aacggcgagg cggtatccag atattcgcca
      181 gcggttgagc acggcaattc tcagccaatc gtaacgcaaa acctaataag aaattttgcg
      241 ctgcttgttc ttcgaactcc ccgacgacag tctccacaag gtgattcgcg ccgaagcagc
      301 atcacagccg atcaggaatg cagtccgcac caaggcgccc aagtgctcga acccagccgg
      361 gttttggccg actccagtgc tgcttggatc tcagcgtcga agtttttttt tgccgatggc
      421 tgttgcgcgg acacgccgcc cgcgccgata cttgcgacga tcgcgagcgc tgtggcgatt
      481 ttgcccctat gtgattgcat attaactccg attgaaaaaa ttccgacgta gtgaaagaag
      541 ctttgcagct gcgcttgaag cgctccttca atgcgaatgg cgcgaattca gcccacaccc
      601 ggttggctga gggcgatttt cggcactcta aacttccact ccagcgccac gacaatcagc
      661 gctacgataa agccgcagag gttggaggcg agccagatcg ttgtcgaggc ggaggggatg
      721 agcgcgacgc cggcgatgat catgatgatg cgtttggtcc agccgagggg gcggaagagg
      781 aagccggcta cgccgatggc gaggaaaata acgccgatga cggcggagac gatggcgctg
      841 ccgatatcga cgaagctgcc tttgaacagc agcgccgggt gaaacacgaa gataaacggc
      901 acgatgtagg cgacgatgcc caagcgcatg ccggtccaac cggatttcca aaaatcggct
      961 ctagcgatag aggcggcggc gtaggtggcg atgcagtcgg gcggcgtgat caaggacagc
     1021 atgccgaagt agaaaaagaa cagatgcgcg gctaacggcg ggatgccgac ttgcaccagc
     1081 gccgggccga cgaggaccgc gagcatgatg tagacgacgg tggtcggcag cgacatgccg
     1141 aggatgatcg acgcgatcgc cgtgagaatt aacagcgcga tggtgctgcc gccggccatg
     1201 ttgaccagta ggagggcgaa cttgaaggtc aggcccgaga gctggaaggc gccgatgacc
     1261 agaccggcga gcgcggtgac gacgacgatg tcgaggagaa tgcggccggt ttcttcgacg
     1321 ctggtcagga tgctcttgaa cgtcggacgc gtgtcttttt gcagcgcgcc gacgaggaag
     1381 gtcgtgacca ccgcggccat gccggctttg ccggcttccc agaaggcgaa catcaaggtg
     1441 taaaccaaaa cgcctagcgg cacgagaaaa acccagccgc gtttgatcac ctggcggaat
     1501 ctgggaatct cgttttccgg catgcccttg aggccgagct tggcggcttc gagatcgatc
     1561 tgggtgaaca gcgcgacata gtaaagacaa gccgggatcg ccgcagcgag ggcgacttcg
     1621 ccgtaggaaa tattcaaaaa ctccgccatc aaaaaggccg ccacgcccat caccggcggc
     1681 ataatctggc cgccgttgga cgccaccgct tcgatggcgg cggcggtgtg agggggatag
     1741 ccgctccttt tcatcatcgg gatggtaatg gcgccgtcga cgacgacgtt agccaccgca
     1801 ctgccggaaa ccgtaccgaa taacgtcgac gacaccaccg cgaccttcgc cgtaccgccg
     1861 cggtagcggc ccatgattac gagcgcgatg tcagtgagaa aggtatcgcc gccgacggcg
     1921 taaagcgctt ggccgaaaaa gataaacgcg acgacgatgc cggcagcaac gtcgaggggc
     1981 aagccgagga tgccgctgga gtcgaggtat agataagcgg cgatgcgctg ccaagaagag
     2041 cctttggcgt ttaagatgcc gggaaataaa taggcgagat tggcgtaaag aatgatcggc
     2101 acggtgatcc agaccaacgc ccagccgacc aagcggcggg tggcttcgag gattaacaag
     2161 atcgccgcgc cgccgagcag ccaacgctcc ggcgagagca tggccaagcg gtaggcgatg
     2221 ctcggataca tgacggtgac gaaaccgccg acgatcaaac tcgcgagtgc cagaatccag
     2281 tcgaaccaag gaatgaccgc gtcggcggcg ccgacgcgcg ctttgacggt gatgaagatg
     2341 ctcgtcatcg ccagggcgaa gaacaggccg agatactgtt ccttaaaaaa cgtccactcc
     2401 attatctcgt gaacgtcgag cgcccagaac gcgcccaaca gcgtcaacgc gcagagcaag
     2461 atgcgcgcga acagcgccgt ggcgccggtc aaaatgcgga atctagttgt cggggcgagg
     2521 tcgtcgctca ttttttaaga taaatctcgt tcaaagcgtt caatcgcttt gctccgttca
     2581 agacgtgcaa taaagttcgg attattccgg ttgttccagc cttgcgctta gttccagacg
     2641 tggcaaatgt ttcagtcgtg aaaaaacgct agactctaga ctacaaactc caaacgacga
     2701 gttacggatt catcgccaac attttcttct ggatctcgtc catcttggcg ggccaggctt
     2761 tgcgctcttt gtagaattgc accgcggcgg gatggtaggc cattgtcgcg tcggggtcga
     2821 cggcgcgctc gcggctccat tcctgcaacg atggatggag cggcgcgagc ttgtcgacgt
     2881 tgtcccagat gcctttgagc gccgcgctga catgttcgtt cgacaaacct ttgtgtccga
     2941 ccaggtacat gtcgtaggcc tggacgcagg tgtcgacgat gatgccgttg gagtggccgg
     3001 ctttgagcgt cgttaaataa tatccgggca cggctttctt gagccgtgcc tcgcctggcg
     3061 gagaacagtc gagggagacg aagcgcacgc cgatcgcggc gtcggcttct ttgatcttcg
     3121 ccgaggcgac agtgtggttg ctgacctcgg cgcggccctg caccaacgcg tcgatgcctt
     3181 cgttgactgc gggaacgggc acgactttga catcctccca agtcaggccg ccggtggcga
     3241 gagagccgaa gacgctgaac cagacggcga gatgggcggg atattctccg gtgacgcgtt
     3301 tgcctttgac atcggcaatg gtttttaccg gaccgtcttt tttcgccacc agactggtta
     3361 ggagcggcga gccgcgcatg atcaggcgcg tgttgggcga gtgcggtaac ggattcttgc
     3421 cgccgatctt taagcgctgg ccttggtagg ccatgcccat gtcgacggcg ttgacgatac
     3481 caaagtcgat ctcgccaatg tcgagcagcg gcaagaacgt gctgctgccg gtataaggct
     3541 gaacgatggc ctgcatcggt cccgcgccac tgatcacttt cgccagaccg ctggcgacgg
     3601 agtagaaaag cgaaccggcg ggattcgatc caatggtcgt cgacgccgga actttctgcg
     3661 catgtactct atcgccttgc atgcacaaca agaccagaaa aaacatcgcg atgatcgtcg
     3721 attggcggtt cataacttat ctcctgtccg aatcaccgct ccaacactcg agtacactat
     3781 ttttctcaac gctcctacgg gttcaccgca agcaattttt tttgtgtctc gtccatcttg
     3841 gcgttccaga gatttttttc tttataaaac tgcacggcgg ccgggtgata ggggagcgtt
     3901 acgtcggcgg aggcagcgcg ctcccgggtc cattcctgaa actgggcgtg gagaggtggc
     3961 aacttatccg tgttatccca gatcgccttg agggaggctc ggattacgtc gttggacaac
     4021 cctttgtggc cgagcatgta gatgtcgaaa gtaagcacac aggtgtcgcc gataattccg
     4081 gttgagaaac cagatttcag tgtcgtcgtc gaatagcctg ggacggcttt tctaactctc
     4141 gcgtcgccct gggaggagca gtcgaccgga acatgacgca caccgacggc ggcgtcggct
     4201 tcttttacct tcgccgcgcc aatcgcgtgt atgctcacat cggcgcggcc ctgagcgacg
     4261 gcgtcgacgc cgtcgttgac tgccggaact ggcacgactt tgacatcgtc ccaggtaagt
     4321 gccgcgctcg ccagggctgc gtagccgtga taccagatcg caatgttcgc cgggta
//
LOCUS       DATIRS010000398         2062 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_817297, whole genome shotgun sequence.
ACCESSION   DATIRS010000398 DATIRS010000000
VERSION     DATIRS010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2062
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_817297"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1063
                     /locus_tag="VLM90_04955"
     CDS             <1..1063
                     /locus_tag="VLM90_04955"
                     /inference="COORDINATES: protein motif:HMM:NF012739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HSQ12340.1"
                     /translation="MLVALAAVIAVVGGFGVWWWRTSGYVSTDDARIKAEVVAVSAEL
                     TAKLNSLTKEEGELVTRQEVLATLDRRELEILLQQADAEADRLRNKARQGAKEIELHI
                     TRQKEEVVKAEAALRASRHQFDDARAHADQAKEDWSRNQKLFDRALVAEQELERAKTS
                     LRQADAQLSTMQEKIKEGQSSLDLARIKAQETAVMEADLQARSADVRRAEAVLADLRR
                     KLQLTTIHSPVAGVVVKKNANTGEVIQSGQPIYMIVDASRYWIEANVEETQIRFVRPG
                     SPVLIRVDSYPDQQFDGKVVEVGGATVSEFSLFTPQKLTGLFIKSTQRLPVKISVTNS
                     NGALRVGMLVVVRIKKQAH"
     gene            1241..>2062
                     /locus_tag="VLM90_04960"
     CDS             1241..>2062
                     /locus_tag="VLM90_04960"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HSQ12341.1"
                     /translation="MKLFQQPASPLQNSAGFRKWSIAITLFLGTLSVGLSVTAVNIAI
                     PTMMSSFGTSLNRIQWVLTGFMITRTVLIPCVGWLGDRLGDRNVFLLSTTLFTAGSLL
                     CSLSWNTESLIFFRIIQGIGAGPLLGVAMAIMFEAFPRHERGLAMGLFMTGWSLGPVL
                     GPILGGYLVEHVHWRAIFYINLPTGLLSIVAGYYILPRTKSHAAAAPLDAFGLITMIG
                     ATIALLLALSMGQEEGWSSRFIVGLFIAAAILTALFLVAETRVKQPFLELSYFRNA"
BASE COUNT          420 a          609 c          623 g          410 t
ORIGIN      
        1 gatgttagtt gctctggccg ccgtcatcgc ggtcgttggc gggttcggcg tgtggtggtg
       61 gcggacctct gggtatgtct ccacggacga cgcccgcatc aaagccgagg tcgtagcggt
      121 tagcgcggag ctgaccgcca agctcaactc gctcaccaaa gaggaaggcg agcttgtcac
      181 ccgccaagaa gtgctcgcca ccctggatcg ccgcgagctg gagatattgc tccaacaagc
      241 cgacgcggag gcggaccgct tgcgtaacaa agcgcggcaa ggggcgaagg agatcgagct
      301 gcacatcacc agacaaaaag aagaagtggt aaaggcggag gccgcgttgc gagcgtcgcg
      361 ccatcaattc gacgacgcgc gggcccatgc cgatcaggca aaagaggact ggtcgagaaa
      421 tcaaaagctc ttcgatcgag cgctcgtcgc cgagcaggaa ctcgagcgag caaaaaccag
      481 cttgcgccag gccgacgcac agctgtcgac gatgcaggaa aaaatcaaag agggccagtc
      541 gagcctggat ttggcacgca tcaaggccca agaaacggcg gtcatggagg ccgatcttca
      601 ggcccgcagc gccgacgtgc ggcgggccga agccgtgctc gccgacttgc gccgcaagct
      661 gcaactgacg acgattcaca gtccggtggc gggtgtggta gtgaagaaaa acgctaacac
      721 cggcgaagtc attcaaagcg gccagccgat ctatatgatc gtcgacgcca gccgctactg
      781 gatcgaagcc aatgtcgagg aaactcagat tcgctttgtc cggcccggca gcccggtgct
      841 cattagggtg gattcctatc cggaccagca atttgacggc aaggtcgtcg aagtcggcgg
      901 cgccacggtt tcggagtttt ccctgttcac gccgcagaaa ctcacagggc tattcatcaa
      961 gtcgacccag cgcctgccgg tcaagatctc tgtgactaat tctaacggcg cgctgcgcgt
     1021 cggcatgctc gtcgtggtgc ggatcaagaa gcaagcccat tgaggtggac cggatggaaa
     1081 ccgttcctag cagctttgtg agatacgctg tgggcaggct gcgcaaaaag atctcacagg
     1141 cgaggcgcgc gaagaatcga tccttcgact acgctcagga cagactggag gggtacgcag
     1201 cctgtacgcc ggagcgaagc gatcgagcgc aacgaagcct atgaagcttt ttcagcagcc
     1261 tgccagccca ctgcaaaatt ctgccggatt ccgcaaatgg tcgatcgcga tcacgctatt
     1321 tctcggaact ctatccgtgg gcttgagcgt gaccgccgtg aatatcgcga tcccgaccat
     1381 gatgtcgtcc ttcggcactt cgttgaatcg catccagtgg gttctcaccg gctttatgat
     1441 cacccgcacg gtgctgattc cctgcgtcgg ctggttgggc gaccgcctcg gcgaccgcaa
     1501 tgtctttctc ttgagcacga cgctattcac cgcggggtcg ttgctctgtt cgctgtcctg
     1561 gaataccgaa tcgctgattt tctttcgcat cattcagggg atcggcgcgg ggccgcttct
     1621 cggcgtggcg atggcgatca tgttcgaagc ctttccgcgc catgagcgcg gcttggcaat
     1681 ggggctgttc atgaccggtt ggtctttggg cccggtcctc ggaccgattc tcggcggcta
     1741 tctggtcgaa catgtccatt ggcgcgcgat cttttacatc aatctgccga ccggcttgct
     1801 gagcatcgtc gccggctatt acattctccc gcgcacgaaa tctcacgccg ccgcggcgcc
     1861 cctcgatgcc ttcggcctaa tcacgatgat cggcgcgact atcgcgctat tgctggctct
     1921 cagcatgggc caggaagagg gctggagcag tcgattcatc gtcggccttt tcatcgccgc
     1981 cgccatactc accgcgctct tcctggtggc ggaaactaga gtaaagcagc ctttcctgga
     2041 gctcagttat tttcgcaacg cc
//
LOCUS       DATIRS010000399         1533 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1800739, whole genome shotgun sequence.
ACCESSION   DATIRS010000399 DATIRS010000000
VERSION     DATIRS010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1533
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1800739"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            288..>1533
                     /locus_tag="VLM90_04965"
     CDS             288..>1533
                     /locus_tag="VLM90_04965"
                     /inference="COORDINATES: protein motif:HMM:NF012431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSQ12342.1"
                     /translation="MAGPNLAETVVDYLIAQNVRHIFGVLAHTLFPFGDAIAKRPELR
                     FINAQHEGGAGNMALGYARATKQPAVCLVSAGGGATNIVTAVAQAYKEAVPLFIISSD
                     IGTASFAKGHWASWHGMEHVRLFQPITKQSARLGRIEELGSVLDSLFRQTTRGRQGPV
                     FFCIPEDLQETHLPEPITFAPSANPAAPAVDARTVAAAADLLVGASAPVLLAGTGVDW
                     AQAQDEVKELAELLSLPVASSYTAKGVFPENHPLALGCLGNGGRMYARPFFQKADLVL
                     AVGTSFSEGTTLGFGHKIIPENARIIHIDTDPEQFGRIYPAELAIQADAKTALRAIID
                     GVKTKPAKAARPDNGKAVAQAKQEWLKGIDETISKQNLGYVSVLRALNEQLTGKEIRT
                     TSGMTGDTLRNIDSKVPIIHAGE"
BASE COUNT          329 a          498 c          420 g          286 t
ORIGIN      
        1 caccacgtta gcaaatgtct gcactgtcga ttccataaat tatacctctt gggcatccct
       61 tgggggattg gctttagcgc cggacctcac accgccagaa gttggccgca actcttcttg
      121 aatactgatg atagcacgcc gcggcgccgc cgtgaacgta aaattagggt gcacgcggag
      181 cgccaatccc cggatcaaaa gtccagcttg aggggccgcg gccattgctt tttccctaac
      241 gctgaactaa gcaggcctag ttattagaag cggaaggagc caagcccatg gccggaccca
      301 atctcgccga gaccgtcgtc gactatttga tcgcccaaaa cgtgcgccac attttcggcg
      361 tgctcgccca cacgctgttt cccttcggcg acgccatcgc caaacggccg gagctgcgct
      421 tcatcaacgc gcagcacgaa ggcggtgccg gcaatatggc gctgggctac gcgcgcgcga
      481 ccaaacaacc ggcggtttgt ctggtctccg ctggcggcgg cgccaccaat atcgtcaccg
      541 cggtcgccca agcctacaaa gaagcggtgc cgctatttat tatatcatca gacatcggca
      601 cggcgtcctt cgccaaaggc cactgggcgt cgtggcatgg catggagcat gtccgcttgt
      661 ttcaaccgat caccaaacag agcgctcgcc ttgggcgcat cgaagaactc ggctcggtgc
      721 tggactcatt gtttcgtcaa accacccgcg gccgccaagg gccggtgttt ttctgcatcc
      781 cggaagattt acaagaaacc catctgcccg agcccattac cttcgcgccg tcagccaatc
      841 ctgcagcccc ggcggtggac gcgcgcacgg tcgccgccgc cgccgatcta ttggtcggcg
      901 cctccgcgcc ggtcctgctc gccggcactg gtgtcgactg ggcgcaggcg caagacgaag
      961 tgaaggagct tgccgagcta ttgtcgttgc cggtggccag cagctatacc gccaaaggcg
     1021 tttttcctga gaatcatccc ctcgctctcg gctgtctcgg caatggtggc cgcatgtatg
     1081 cccgaccatt ttttcagaaa gccgacttgg tactcgccgt cggcaccagt ttcagcgaag
     1141 ggactaccct cggcttcggc cacaaaatca taccggaaaa cgcccggatc attcacatcg
     1201 acaccgatcc ggaacagttc ggccgcatct acccggccga gctggctatc caagccgatg
     1261 ccaagaccgc cttgcgcgcg ataattgacg gtgtgaaaac caagcccgcg aaagccgcgc
     1321 gacccgacaa tggcaaagcg gtggcacaag ccaagcagga atggttgaag ggcatcgacg
     1381 aaactattag caaacaaaat ctcggatatg tttctgtgct gcgcgcgctc aacgaacagc
     1441 tcaccggcaa ggaaatccgg accacctcgg gcatgaccgg cgacaccctg cgcaacatcg
     1501 actccaaggt gcccatcatc cacgccggcg agt
//
LOCUS       DATIRS010000400         1802 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_30452, whole genome shotgun sequence.
ACCESSION   DATIRS010000400 DATIRS010000000
VERSION     DATIRS010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1802
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30452"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..704
                     /locus_tag="VLM90_04970"
     CDS             <1..704
                     /locus_tag="VLM90_04970"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12343.1"
                     /translation="VCKQSPRLKAVALVALQDPEAAVAEANRAVTKLGLSSIAVATQG
                     TKEHLGSKSFWPLYEEMQRLNVPLSVHNRREGPAGDKRFDSFIFMHTIGRPVETFIQF
                     AGLMYAGVPEKFPKLRVSFLECGVGWAPYWIERMDEEWEKRGKVETPLCKHKPSEYIG
                     QGNWFFAFEPEEETLPYAIERIGDDKILFASDYPHWDGMFPNVTKTIRGRKDISDQAK
                     NRLLGENAKRLYGWN"
     gene            709..1626
                     /locus_tag="VLM90_04975"
     CDS             709..1626
                     /locus_tag="VLM90_04975"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12344.1"
                     /translation="MVRRLFGFLFLALSLVPAAYAFAADAQPLRKVRMAFTSLSSVMC
                     PPWIARELGIFNKHGLDVEVIATPTGVEGMNALIAGEVQFLQISGGTTASAALGGADV
                     MVVGTTLDALVQSLMARPEIEKAEQLKGKSVGITRFGTSIDVGARMALKHFGLVPEKE
                     VAIVQVGGMESMVTALQTNRIQAGILSYPAITQALKLGHHTLLDVASLGIPYAFTGMT
                     TRGRLIKEDADLVRRYMMAQTEAIARAKRDKNMALKVMGKYLRTTNPNALAESYDIDV
                     QKYLLRVPLTTAEAMKSVLDDLAGRIPKA"
BASE COUNT          387 a          525 c          515 g          375 t
ORIGIN      
        1 acgtgtgcaa acaaagtccg cgtctcaaag cggttgcgct ggtcgccttg caggaccccg
       61 aggccgcggt cgccgaggcc aatcgcgcgg tgaccaagct tggcctgagt tcgatcgcgg
      121 tggctaccca aggcaccaaa gagcatctgg gatcgaagag tttctggccg ctctatgaag
      181 aaatgcagcg attgaatgtc ccgctcagcg tgcataaccg gcgcgagggt cccgcgggtg
      241 acaaacgttt cgacagtttt attttcatgc acaccattgg tcgtcccgtc gagacgttca
      301 ttcagtttgc cggtttgatg tatgccggcg ttcccgagaa gtttcccaaa ctgcgggtgt
      361 cgtttctcga atgcggcgtg ggttgggctc cctattggat cgaacggatg gatgaggaat
      421 gggagaagcg cggcaaagtc gaaacgccgc tgtgcaaaca caagccaagt gaatatatcg
      481 gccagggcaa ctggtttttc gccttcgagc cggaagaaga gacgctgccc tacgccatcg
      541 aacgcattgg cgacgacaaa atccttttcg cctcggacta tccgcactgg gacggcatgt
      601 ttcctaatgt gacaaaaacc attcgcggcc gtaaggatat ttccgaccaa gcgaaaaacc
      661 ggctcttggg agaaaatgcc aaacggctgt acggctggaa ctaatttgat ggtccgtcga
      721 ttgttcggtt tcttgtttct ggcgctgagc cttgttccag cagcctacgc cttcgcggcc
      781 gatgctcagc ctctgcgtaa agtgcgcatg gccttcacct cgctgtcctc ggtcatgtgt
      841 ccgccttgga ttgcccgcga gctggggatt ttcaataaac acggcttgga cgtcgaagtg
      901 atcgccactc ccaccggcgt cgaaggcatg aacgctctga ttgccggcga agtgcagttc
      961 ttgcaaatct ccggcggcac caccgccagc gcggccttgg gcggcgccga tgtcatggtc
     1021 gtcggcacga ccctcgacgc gctcgttcaa agtctaatgg cgcggccgga gatcgagaag
     1081 gcggagcagc tcaaaggcaa atccgtcggc atcacccgct tcggcacatc gatcgatgtc
     1141 ggcgcgcgca tggcgctcaa gcactttggt ctggtgcctg agaaagaagt cgccatcgtc
     1201 caggtcggcg gcatggagtc gatggtcacc gccttacaaa ccaatcgcat tcaagccggc
     1261 attctttcct atccggcgat cacccaggcg ttgaagcttg gccaccacac gctactcgat
     1321 gtcgcatcgt tgggcatccc ttacgccttc accggcatga ccacccgcgg ccgtttgatt
     1381 aaggaggatg ccgatctggt gcgccgttac atgatggcgc agaccgaggc gatcgcccgc
     1441 gccaagcgcg acaagaatat ggcccttaaa gtcatgggca agtatctgcg cacgactaat
     1501 cccaatgccc tcgccgagtc ctatgacatc gacgtgcaaa aatacctgct gcgcgtgccg
     1561 ctgaccacgg cggaagcgat gaagtcggtg ctcgacgatc tcgccgggag aatcccgaaa
     1621 gcctaagacg ccgacccaag aaaattcttc gacgacagct tcgtgcggca aatgcagtcc
     1681 agcggtttca tcgacgccct ctacaaatag ctgcgcgtgc tatcgcaagc gtcaaaatcc
     1741 gcctttggtt tgccccacgg gcctgcctga tataagaaat taccgataga tctggaggta
     1801 gg
//
LOCUS       DATIRS010000401         7072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1407749, whole genome shotgun sequence.
ACCESSION   DATIRS010000401 DATIRS010000000
VERSION     DATIRS010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 7072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7072
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1407749"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..296)
                     /locus_tag="VLM90_04980"
     CDS             complement(<1..296)
                     /locus_tag="VLM90_04980"
                     /inference="COORDINATES: protein motif:HMM:NF045213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12345.1"
                     /translation="MSGHSKWSTIKHKKAAKDAKRGKIFTKLIKEITVAARMGGGDIN
                     ANPRLRTAVLTARGSSMPSDNIERAIKKGTGELEGVTYEEIQYEGYGPGGVAIIA"
     gene            423..1112
                     /locus_tag="VLM90_04985"
     CDS             423..1112
                     /locus_tag="VLM90_04985"
                     /inference="COORDINATES: protein motif:HMM:TIGR00413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HSQ12346.1"
                     /translation="MLYNRKAKNPKRMTRRYLFFVALALASACSIPPSRVRVPVPPAA
                     DSRASQTGIASWYGPGFHGKATASGEIYNQNDMTAAHQTLPLGTKVMVTNMENGRSAE
                     VLVNDRGPFAKGRIIDLSHAAARSVDMLGPGTALVRVEVLDSPVPLRSIPPALDYTLQ
                     LGSFSQLENAQQLRDRIVKSFDGVTITPLQSKDTTYYRVHLGKFSNRSAAEDMAKQLS
                     QAGYSVIIMEK"
     gene            complement(1329..2138)
                     /locus_tag="VLM90_04990"
     CDS             complement(1329..2138)
                     /locus_tag="VLM90_04990"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSQ12347.1"
                     /translation="MATPDFIGKFTANNPGLMTLQGTNQYIVGKESGLVIDVALSADS
                     NMDGIIEQAEAMGVKKIDRILLTHIHSDHTGGALALRKRCGAKLGIHRSRKGYLGGED
                     FQYDDNDLIDFGGGELHVLHTPGHESGHCCFYESGDKVLFSGDNILGYGTAVIHPPDG
                     NMSDYMRTLERLLGFEMSVILPGHGPLIGKPEAKVREYIKHRLGREQQVIAALRANRN
                     TIGDITESIYVDVSAALKRVAEFSVQAHLEKLERDGKVKKEAGQYFLLSDN"
     gene            complement(2359..5052)
                     /gene="acnA"
                     /locus_tag="VLM90_04995"
     CDS             complement(2359..5052)
                     /gene="acnA"
                     /locus_tag="VLM90_04995"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: protein motif:HMM:NF006757.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HSQ12348.1"
                     /translation="MAQKHVDSFGTRKVLTVDGESYDIFRLDLLEKAGFKNISRLPVS
                     LKVLLENLLRQEDNHHVSKADIEALANWDAKVKSGKEIAFMPARVLMQDLTGVPAVVD
                     LAAMREAMKRLGGDPKKINPLAPVDLVIDHSVQVDYFGSADAFQKNSEIEFERNVERY
                     AFLRWGQMAFDNFRLIPPDVGICHQVNLEYLAPVVFRAKKDGAHFAYPDSVVGTDSHT
                     PMINGLGVVGWGVGGIEAEAALLGQPIIMLIPEVIGFKLHGKLPAGATATDLVLTVVQ
                     MLRKKGVVEKFVEFYGSGLSSLSLADRATIGNMGPEYGATVGYFPIDDETLRYLTLTA
                     RDPHLIKLVETYAKEQGMFRTDASPDPMFTDTLELDLASVVPSISGPRRPQDRIALTD
                     SKKAFAEALPSLMKTKNADKRVAVQVNGDKFELKHGSVVISAITSCTNTSNPSVLIGA
                     GLLAKKAGEKGLTRKPWVKTSLAPGSRVVTEYLKDSGLLPHLENLGFHIVGYGCTTCI
                     GNSGPLPESIANGIQEGDLVATAVLSGNRNFEGRIHANVRANYLASPPLVVAYALAGS
                     MDVDLYNDPLGNDRAGKPVFLKDIWPTPQEVQEVMNKSVRQEMFKKEYSKASEGDERW
                     RGMPVPEGELFQWDMQSTYVREAPYFDGMGKTPNPIKPITGARALALIGDSVTTDHIS
                     PAGSIEKNGPAARYLTNNDVLPKDYNQYGARRGNHEVMMRGTFANIRLKNMLAPGTEG
                     GVTVHIPDKKPMSIYDAAMQYQKEGTPLIVIAGKEYGSGSSRDWAAKGPRLLGIRAAI
                     AESYERIHRSNLIGMGIVPLVFKPVENLSTHGLTGFEKFDILGIGNDLQLRQELTVKA
                     TADDGKTTEFKVICRIDTPAELDYYRHGGILEYVLRQLLAN"
     gene            complement(5251..>7072)
                     /locus_tag="VLM90_05000"
     CDS             complement(5251..>7072)
                     /locus_tag="VLM90_05000"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HSQ12349.1"
                     /translation="GDFLSRIHSDDREIVNRARRRAHDPAGDGRLLYECRVVRRDGSV
                     GWILNRAQTFFDGTGDARKPARTIGAVLDITERMRSEEALRSSEERLKHALAVGHMGT
                     WERDLRSGEMAWDDRDFEIFGIAKDRAISRDLFLAHVHPADLPVMEEAISRSERDGQD
                     YACEFRLLRPDGKMIWLSAHGGLRRDANGVATHLAGINYDITERKTAEETLRNLNEQL
                     DRRVAQRTQELAESRARLRALVAELTMTEERERRRLAVDLHDTLAQSLAVVNLYLWRV
                     RELLGDQAHGISFKEVLGNLNTTVDDSIKYTRSLIAELSPPVLYDLGLPAAFRWLGEQ
                     MGRHGLHVEVDGPADGFSLAQDDAVFLFQCARELLWNVVKHGFTDRATVVYGCDSDGV
                     SLAVTDNGIGFDAQTVRANGDGRSHFGLFSIHERVELRGGVVEINSTPGAGSRVLIVL
                     PMDRTAGASVNSGEPILLPSATAPVIEQAIKILIVDDHKMLRQGLRRVLEEQGGFTVV
                     GEASDGAEALALARVLEPQVVIMDVNMPNMNGIEGTEKIIHDRPSTIVIGISFGTEDY
                     VVRGMQAAGAVTCLPKERAVEDVSQAIMDAVAARRQIKHA"
BASE COUNT         1405 a         2213 c         1953 g         1501 t
ORIGIN      
        1 gcgatgatcg ccacgccgcc cggaccataa ccttcgtatt gaatctcttc ataggttacg
       61 ccttcgagct cgccggtgcc ttttttgatc gcgcgctcga tattatcact cggcatactg
      121 ctgccgcgcg cggtgagaac cgccgtgcgc agacgcggat tggcgttgat atcgccgccg
      181 cccatgcgtg ccgccacggt gatttcctta atcagcttgg taaatatttt gccgcgcttg
      241 gcatccttgg cggctttctt atgtttgatc gtgctccatt tagaatggcc ggacatactt
      301 caatcactcc ctagtaaggt gccgacaagc tagcacaaag cccagaccgg gtaaactagc
      361 ccatacgatg cggcgcgacg aacgggttaa atctgcgccg cgatactttt gttcagtggt
      421 ctttgctgta taatcgcaaa gctaagaacc caaagcgcat gacccgccgc tatttatttt
      481 ttgtcgcctt agctctggcc agtgcctgtt ccataccgcc atccagggtc cgcgttccag
      541 taccgccggc ggctgattcg cgcgccagcc aaaccggcat cgcttcatgg tacggccccg
      601 gctttcacgg caaagccacc gccagcggcg agatttataa tcaaaacgac atgaccgcgg
      661 cgcaccaaac cttgcccttg ggcaccaagg tgatggtcac caacatggag aacggccgca
      721 gcgccgaagt gttggtcaac gaccgcgggc cgttcgccaa aggaagaatc atcgatcttt
      781 cccacgccgc tgcccggtct gtcgacatgc tgggacccgg aaccgcattg gtgcgcgtcg
      841 aggtgctcga cagcccggtg ccgctgcgct cgattccccc ggccctcgac tacacgctgc
      901 aattaggttc cttctcccag ttggaaaatg cccagcaatt gcgcgaccgc atcgtcaaga
      961 gttttgacgg cgtcacgatc acgccgttgc aatcaaagga cacgacttac tatcgagttc
     1021 acctcggtaa gttctccaac cgcagtgccg ctgaagacat ggccaagcaa ttgagccaag
     1081 ccggctactc ggtgatcatt atggagaaat aggtgagtgg gaccagttcc gcttagtcgt
     1141 tgcaccactt gagccatggc ctgctgttga ttggactgct gaatctcgct gccggttgtt
     1201 tcgcgccgga attgaaaacc atcccggcgc cccgaccggt tgcccgccac cgcggaggca
     1261 gcatggcagg atttagaagt tgataccgcg ccggaggttt tgcgtttcgg ctcagcccat
     1321 ggcccggctc aattgtcgct tagcaaaaaa tattggcccg cttctttttt gaccttgccg
     1381 tcgcgctcga gcttttccag atgcgcctgc acggaaaact cagcgacccg tttgagcgcc
     1441 gccgaaacat cgacgtagat cgattcggtg atatcgccga tggtgttgcg gttggcgcgc
     1501 aacgccgcga tcacctgctg ctcgcgcccc aaccggtgct tgatgtactc gcgcactttg
     1561 gcttccggct tgccgatcag cggaccgtgg cccggcagga tcacgctcat ctcgaagcca
     1621 agcaaacgct ccagcgtccg catgtaatcg ctcatgttgc cgtccggcgg atgtatcacc
     1681 gcggtaccgt agccgaggat gttatcgccg ctgaacaaga ctttatcgcc gctttcataa
     1741 aagcaacagt ggcccgactc atggcccggc gtgtgcagca catgcagttc gccgccgccg
     1801 aagtcgatca ggtcgttgtc gtcgtattga aagtcttcac cgccgaggta gcccttgcgc
     1861 gagcgatgga tgccgagttt ggcgccgcag cgtttgcgca gcgccagggc gccgccggtg
     1921 tgatcgctgt gaatatgcgt gagcaaaatc ctatcgattt ttttcacgcc catggcctcg
     1981 gcctgctcga tgatgccgtc catgttcgag tcggcgctga gcgcgacgtc gatgaccaag
     2041 cccgactcct tgccgacgat atactgattg gttccctgca aggtcatgag gccgggatta
     2101 ttggcggtga atttgccgat aaagtcaggc gtagccatag gatttccttc cgcggcaagc
     2161 gcgccgctgc gcacgaacga acgggcaaaa aaaagcgcca gcgagattct tcccattctc
     2221 gccagcgctg ctctacgtgt aatcacgaaa gatgtgccaa ttgcgcaaga tttttttcac
     2281 cacgaaggca cgaagtgcac gaagttcgga gatttggaca tcctaaccct tcgtgacctt
     2341 cgtggtgagt ccccttcttc agttcgccaa caactggcgc agcacatact ccaaaatgcc
     2401 gccatggcgg taataatcca gctccgccgg cgtatcgatg cggcagatga ctttgaattc
     2461 ggtcgtcttg ccgtcgtccg cggtcgcctt gaccgtcagc tcctggcgca gttgcaaatc
     2521 gttgccgatg ccgaggatgt cgaacttctc gaaacctgta agaccgtggg tcgataaatt
     2581 ttccaccggc ttgaacacca acggcacgat gcccatgccg atcaagttgc tgcgatggat
     2641 gcgctcgtaa ctttccgcaa tcgctgcgcg aatgcccaat aagcgcggcc ccttggccgc
     2701 ccagtcgcgc gacgagcccg agccgtactc cttgccggcg atgacgatca gcggcgtgcc
     2761 ttctttctga tactgcatcg ccgcgtcgta gatcgacatc ggcttcttgt cgggaatgtg
     2821 caccgtcacg ccgccttcgg tgcccggcgc caacatattt ttcagtcgaa tattggcaaa
     2881 ggtgccgcgc atcatcactt catggttgcc gcgccgcgcg ccgtactgat tgtaatcctt
     2941 gggcagcacg tcattgttgg tcagatagcg cgctgccgga ccgttctttt caatcgaacc
     3001 ggccggcgaa atatgatcgg tggtgaccga gtcgccgatc agcgccaacg cccgcgcgcc
     3061 ggtgatcggt ttgatcgggt tgggggtctt acccataccg tcgaagtacg gcgcttcgcg
     3121 cacataagtc gactgcatgt cccactggaa cagctcaccc tcgggcaccg gcatgccgcg
     3181 ccagcgctca tcaccctcgg aggccttgct atattctttc ttgaacatct cctggcgcac
     3241 cgacttgttc atcacttcct gaacttcctg cggcgtcggc cagatgtctt tgagaaaaac
     3301 cggcttgccg gcacggtcgt tgcccagcgg atcgttgtac agatctacat ccatgctgcc
     3361 ggccaaggcg tacgcgacaa ctagtggtgg cgaggctaga tagttcgccc gcacattggc
     3421 gtgaatgcgg ccttcgaaat tgcggttgcc cgacagcacg gcggtggcga ctagatcgcc
     3481 ctcttggatg ccgttggcga tagactccgg caatggaccg ctgttgccga tacaagtggt
     3541 gcagccgtag ccgacgatat gaaaaccgag attctctaaa tgcggcaaca aaccgctgtc
     3601 cttcaaatac tccgtaacca cgcgcgaccc cggcgccaag ctggttttaa cccagggttt
     3661 gcgcgtcagg cccttttcac cggctttctt ggcgagcaat ccggcgccga tcaacaccga
     3721 tggattggaa gtattggtgc agctggtgat cgccgagatc accaccgagc catgcttgag
     3781 ctcgaactta tcgccgttta cctgcaccgc gactctcttg tccgcgttct tggttttcat
     3841 cagtgaaggc aatgcctcgg cgaaggcttt cttgctgtcc gtcagcgcaa tgcggtcctg
     3901 cggccggcgc ggcccggaga tgctcggcac cacgctggcg agatccaatt ccaaggtatc
     3961 cgtaaacatt ggatcgggcg aagcgtcagt gcggaacatc ccctgctctt tggcataggt
     4021 ttcgacgagt ttaatcagat gaggatcccg cgcggtgagc gtcagataac gcagcgtctc
     4081 atcgtcgatg gggaaatagc cgacggtggc gccgtactcc ggccccatgt tgccgatggt
     4141 ggcgcggtcg gcgagactca agctcgacag tcccgagccg tagaactcga cgaacttttc
     4201 gaccacgccc ttcttgcgca acatctgcac gaccgtcaaa accaagtcgg tcgccgtcgc
     4261 gccggccggt agcttgccgt gtagtttgaa gccgatcact tcggggatca gcatgatgat
     4321 cggctggccc aaaagcgcgg cctcagcctc gataccgccg acgccccaac cgacgacgcc
     4381 gaggccgttg atcatcggcg tgtgcgagtc agtgccgacg acggaatcgg gataagcgaa
     4441 gtgcgcgccg tccttcttgg cgcggaatac caccggcgcg agatattcaa gattgacctg
     4501 gtgacagata ccgacatcgg gcggaatcag acgaaaatta tcgaaagcca tctggcccca
     4561 gcgcaagaac gcataacgct cgacattgcg ctcgaattca atttcggagt ttttctggaa
     4621 tgcatcggcg gagccgaaat agtcgacctg caccgagtga tcgatcacca gatcgaccgg
     4681 tgccaacgga ttgatcttct tgggatcgcc acccaaccgt ttcatcgctt cgcgcatggc
     4741 cgccagatcg accacagcgg gaacaccggt gagatcctgc atgagcaccc gcgccggcat
     4801 gaaagcgatt tctttacccg attttacctt ggcgtcccag ttggccagcg cttcgatgtc
     4861 agccttgctg acgtgatggt tgtcttcctg cctgagcaag ttttccagca aaaccttcag
     4921 cgataccggc aagcgcgaga tattcttaaa tcccgccttc tccaacagat cgaggcgaaa
     4981 aatgtcgtag ctctcgccgt cgacggtcaa gaccttacgc gtgccgaaac tatccacatg
     5041 cttctgtgcc atgagcgctc cttaagtaga gactggtagg ccttattttg tagcgagcgt
     5101 caggggagaa agcaacaggg agagtggcgg gttattcggc acccgggtcg aagatcgata
     5161 atggcggatc gaggatagcg tgtcgatcct ccgtcgtcga ttcttgaccc tccactcaca
     5221 acacccgaat gcgcccaccg gaggtaacgt ctaggcatgc ttaatctgcc gccgcgccgc
     5281 caccgcatcc atgatcgctt gactgacatc ttcgacggcg cgttccttag ggaggcaggt
     5341 caccgccccg gccgcttgca tcccccggac cacataatcc tcagtgccga aggatatccc
     5401 gatgacgatg gtcgatggcc ggtcatggat gattttttcg gtcccctcga taccattcat
     5461 attcggcata ttgacgtcca taatcactac ctgcggttcg agcacccgcg ccagggccag
     5521 cgcttccgct ccatcgcttg cctcgccgac gacagtgaag ccgccctgct cttccaacac
     5581 tcggcgcaaa ccctgacgga gcattttatg atcgtcgacg ataagaattt tgatcgcctg
     5641 ctcgataacc ggcgcggtcg cgctcggcaa caaaatcggc tcgccgctat tgaccgaggc
     5701 tcccgccgtt cgatccatcg gcaaaacgat caacacccgg ctgcccgctc ccggagtaga
     5761 attgatttcg accaccccgc cgcgcagttc cacccgttcg tggatgctga acaagccgaa
     5821 atggctgcgg ccgtcgccgt tggcgcgcac ggtttgcgca tcaaacccaa tgccgttgtc
     5881 tgtgaccgcg agagacacgc catcgctatc gcatccataa actaccgtcg cgcggtcagt
     5941 gaagccatgc ttgacgacgt tccacagcag ttcgcgcgcg cactggaaca ggaataccgc
     6001 gtcatcctgt gccagcgaga agccatcggc cggtccgtcg acctcgacgt gcaagccatg
     6061 ccggcccatt tgctcgccga gccagcggaa cgccgccggc aggcccaggt cgtagagcac
     6121 cggcggactc aactcggcga tcagcgagcg cgtgtacttg atcgaatcgt cgactgttgt
     6181 attgaggttg cccaagactt ccttgaacga aatgccgtgc gcctggtcgc ccagcagttc
     6241 gcgcacccgc cacaggtaca ggttgaccac cgccaacgac tgcgccaagg tgtcgtgcag
     6301 atccaccgcc agccggcgcc gctcgcgctc ctcggtcatg gtcaattcgg cgaccagcgc
     6361 gcgcaatcgg gcacgcgact cggcgagttc ttgggtgcgc tgcgcgacgc gccggtcgag
     6421 ttgctcgttc aaattccgta gcgtttcctc cgcggttttg cgctcggtga tgtcatagtt
     6481 gatgccggcg agatgcgtgg caacgccgtt ggcgtcgcgc ctgagcccgc catgagcgct
     6541 cagccaaatc atcttgccat cgggccgcag caagcggaat tcgcacgcgt agtcctggcc
     6601 gtcgcgctca gatctgctaa tcgcttcctc catgaccggc agatccgcgg gatgaacatg
     6661 ggcaagaaac aagtcgcggc tgatggccct gtccttggca attccgaata tttcgaaatc
     6721 ccggtcgtcc caagccattt ctccgctgcg caaatcccgc tcccaagtgc ccatgtgccc
     6781 caccgccagc gcatgtttaa gccgctcctc gctggaacgc agcgcttctt cggagcgcat
     6841 acgctcggta atatcgagca ccgcgccgat ggtacgcgcg ggcttgcggg cgtccccagt
     6901 gccatcgaaa aaggtttgcg cccgattcaa gatccagcca acgctgccgt cgcgccgaac
     6961 cacgcggcac tcatataaca agcgcccgtc gccggctgga tcatgagccc gccgccgtgc
     7021 ccggttgacg atttccctat cgtcactgtg gattcgcgat aaaaaatcgc cc
//
LOCUS       DATIRS010000402         4416 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_128908, whole genome shotgun sequence.
ACCESSION   DATIRS010000402 DATIRS010000000
VERSION     DATIRS010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4416
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128908"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1592)
                     /gene="ctaD"
                     /locus_tag="VLM90_05005"
     CDS             complement(<1..1592)
                     /gene="ctaD"
                     /locus_tag="VLM90_05005"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR02891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit I"
                     /protein_id="HSQ12350.1"
                     /translation="MNYLNVNYGVKSWLLTRDHKRIALLYLGAVTLFFFIGGAAAVIF
                     RIELLTPQGDLVQAETYNKLFTMHGIIMIFLFLIPAIPAVLGNFLVPMMLGARDLAFP
                     RLNLASWYVFVTGGLFLLGAMIAGGVDTGWTFYTPYSTVYSNSYVIATALGAFIVGFS
                     SIMTGLNFVVTIHTMRAPGQTWFRLPLFIWSHYATSVIILLGTPVLAITIVLLALERL
                     LGLGIFNPALGGDPILFQHLFWFYSHPAVYIMILPAMGVISELITTFSRKRIFSYSFV
                     AFSSIAIAVLGFFVWGHHMFVSGQSVYAGMVFSFLSMFVAIPSAIKVFNWTATLYKGS
                     VSWQTPLLYALGFIGLFTIGGLTGLFLATLAVDVHVHDTYFVVAHFHYIMVGGTIMGY
                     LGGLHFWWPKISGRLYPEGWAKFAALVIFVGFNLTFFPQFLLGYLGMPRRYYAYPEEF
                     QVLNVMSSAGASILGVGYLIPMVYFIWSMRYGPPASANPFGASGLEWQTASPPPTENF
                     AATPVVTCEVYTYPSEHDRGTNP"
     gene            complement(1626..2600)
                     /gene="coxB"
                     /locus_tag="VLM90_05010"
     CDS             complement(1626..2600)
                     /gene="coxB"
                     /locus_tag="VLM90_05010"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR02866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HSQ12351.1"
                     /translation="MRSGFPLFPEQASTLAGRVDAIYFFLVIISGFFSLLIFAAVIYF
                     AIKYHHRAGEEHAPGLVNDNLTLEIVWTVVPLALTMIMFVWGAKVYFSMSRPPNDSLE
                     IFVVGRQWMWKFQHPDGQREINELHVPLGQPVKLVIASEDVIHSFYVPAFRVKQDAVP
                     GRYTTVWFEATKTGRFHMFCAEYCGTQHSGMIGRIVVLEPVQYAAWLSGDTAPSGAAM
                     AATRPPAEGSLADRGHRLFQQLGCASCHLPDRQGIGPLLHGVFGNPVRLRDGRTALAD
                     ESYIRESILQPQAKITAGFQALMPSFQGRVNEEELMQLLAYIKSLKKI"
     gene            complement(2709..3548)
                     /locus_tag="VLM90_05015"
     CDS             complement(2709..3548)
                     /locus_tag="VLM90_05015"
                     /inference="COORDINATES: protein motif:HMM:NF014667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HSQ12352.1"
                     /translation="MNGLNEAQRLNDLNVKNNQMPSFIIITLLAFVLVTPALAHDGDR
                     QKALLDSVTIEERLDNQLPLDLALRDETGAAVTLRRYFTGKPVLLAFVYYDCPQLCPL
                     VLEGLGRSLRVLRLAGEDYQVIAVSIDPAETAALAARKKKALHGAASWHFLTAPVQTI
                     DALTQAAGFRYRPSQSAGKESFIHAANTLVLTPEGRISRYFSSIDFPPKELRFALIEA
                     SGNRVGSPLDHLLLLCYRYDPAQGRYTLAILNVLRLSALITVAAVGGFIAIMLLRERR
                     KTA"
     gene            complement(3652..4047)
                     /locus_tag="VLM90_05020"
     CDS             complement(3652..4047)
                     /locus_tag="VLM90_05020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12353.1"
                     /translation="MVEHAHAPRQDNPAVSHESSDVDLRRITYWGVGLAAAVVLIMVF
                     LFWLFNFFSKRESRLGHDPVGIRQSMPPTTGPPLQISPRSEMAEMRAAENKILHSYGW
                     IDKKKGVVRIPIERAMELTAQRGLPARKK"
     gene            complement(4040..>4416)
                     /locus_tag="VLM90_05025"
     CDS             complement(4040..>4416)
                     /locus_tag="VLM90_05025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12354.1"
                     /translation="WSGNLPEEISWYLRRNRGGWQWIVIILVTFHFIVPFLLLLSRQV
                     KRPAPALAAVAGALIIMRMIDIFWYTAPAFNPGRLTIHWMDIAAPVGLGGVWLAMFLR
                     NLRQRPLWPLHDPNACEAIDHG"
BASE COUNT         1048 a         1225 c         1351 g          792 t
ORIGIN      
        1 gggtttgtgc cacggtcgtg ctccgatggg taggtataaa cctcgcaggt gaccactggg
       61 gtagcggcga aattttccgt gggcggcggc gacgcggtct gccattccaa gccgctcgcg
      121 ccgaatgggt tggcgctcgc cggcgggcca tagcgcatcg accagatgaa ataaaccatc
      181 ggaatgagat agccgacgcc gaggatcgag gcgcccgccg aggacatgac gttcaatacc
      241 tgaaactctt cggggtaagc gtagtagcgc cgcggcatgc ctaaatagcc cagtaaaaac
      301 tgcggaaaaa aagtcagatt gaaaccgacg aaaatgacca gggcggcaaa cttcgcccag
      361 ccttccggat atagccggcc ggaaattttc ggccaccaaa agtgcagccc gccgagatag
      421 cccatgatgg tgccgccgac catgatgtag tgaaagtgcg cgacgacaaa ataggtgtcg
      481 tgaacgtgca cgtcgaccgc cagagtcgcg agaaaaaggc cggtcaagcc gccgatggtg
      541 aacagtccga taaagcccag ggcgtagagc agaggggtct gccaggacac cgagcctttg
      601 tacagagtcg ccgtccagtt aaaaactttg atcgccgagg ggatcgccac gaacatgctc
      661 aaaaaggaaa acaccatgcc ggcataaaca gattggccgc tgacgaacat atggtggccc
      721 cagacaaaaa agcccagcac tgcgatggcg atgctggaga aagcgacgaa cgaataactg
      781 aagatgcgtt tgcgcgaaaa cgtcgtgatc aactcgctga tcactcccat ggcggggaga
      841 atcatgatgt aaaccgccgg atgggaataa aaccagaaca ggtgttggaa gagaatcgga
      901 tcgccgccca gagcgggatt gaaaatcccc aagcccagta gccgctcgag agccaacagc
      961 acgatggtga tcgccagcac cggcgtgccg agcaatataa tgacgctggt cgcataatgc
     1021 gaccagataa acagcggcaa acgaaaccag gtctgcccag gggcgcgcat ggtgtggatg
     1081 gtcacgacga aattgagccc ggtcatgatc gaagaaaagc cgacgatgaa ggcgccgagg
     1141 gcggtagcga tgacatagct gttgctgtag accgtgctgt agggggtgta gaacgtccat
     1201 ccggtatcga cgccgccggc gatcatggcg ccgagcagga acaacccgcc ggtgacaaac
     1261 acgtaccagc tcgccagatt taaccgggga aaggcgaggt cgcgcgcgcc caacatcatc
     1321 ggcacgagga aatttcccaa gactgcggga atcgccggaa tcaaaaacaa gaaaatcatg
     1381 atgatgccgt gcatggtgaa cagcttgttg taagtctcgg cctgcaccaa atccccctgc
     1441 ggggtcaaaa gctcgatgcg aaagatcacc gccgccgcgc cgccgatgaa aaagaacagc
     1501 gtcacggcgc ccaggtataa aagcgcgatg cgcttgtgat ctcgggtcag caaccaagat
     1561 tttacgccgt agttgacgtt gagatagttc atttcagacc gactcttcca aaccgcgcac
     1621 ccaagttaga tttttttaag ggacttgatg tacgccaaga gctgcatcag ttcctcttcg
     1681 ttcactctgc cctgaaacga cggcattaac gcctggaatc cggcggtgat tttcgcttgc
     1741 ggttgaagga tcgattcgcg gatgtaactt tcgtccgcca gcgcggtgcg gccgtctcgc
     1801 aaccgcaccg ggttgccgaa gacgccgtgt aacagcggcc cgatgccttg gcggtccggt
     1861 aggtggcagc tggcgcagcc gagttgttga aacaggcggt ggccacggtc ggccagcgat
     1921 ccctcggcag gcggccgtgt cgctgccatg gcggcaccgg agggtgcggt gtcgccgctc
     1981 agccacgcgg cgtactgcac cggttcgagc accacgatgc ggccgatcat gcccgagtgt
     2041 tgcgtgccgc aatactcggc gcagaacata tggaatctgc cggtcttggt ggcctcgaac
     2101 cagacggtgg tgtagcggcc cggcaccgcg tcttgcttga cccgaaacgc cggcacgtaa
     2161 aaactgtgaa tcacatcttc gctggcgatg acgagcttga ccggctggcc gagcggcaca
     2221 tgaagctcgt tgatctcacg ctggccgtcc gggtgctgaa acttccacat ccactggcgg
     2281 ccgacgacga atatttccag cgaatcatta ggcgggcgcg acatcgaaaa gtaaaccttc
     2341 gcgccccaga cgaacatgat catggtcaag gcgagcggga cgaccgtcca gacgatttcc
     2401 agcgtaagat tatcgttgac caggccgggg gcgtgttctt cgccggcccg gtgatgatac
     2461 ttaatggcaa agtaaatgac ggcggcgaaa atgagcagcg aaaaaaaacc gctgatgatt
     2521 accagaaaaa aataaatcgc atcgacgcgg ccggctaaag tcgatgcctg ttcggggaat
     2581 aggggaaagc cggaccgcat aactaattca aaacacgttc aagctgttca accacttcgt
     2641 tccgttcaag cggttcaagc cgtctcggac gtcgcgacag ttgaaacctt cgcggcgctt
     2701 taacgcgatc aagcggtttt ccgccgctcg cgcagcaaca tgatcgcgat aaagccgccg
     2761 acggcggcga ccgtgatcag cgccgagagg cgcaggacgt tgaggatcgc cagggtgtag
     2821 cggccctggg cgggatcata ccggtaacag agcagcagca aatggtcgag cggcgagccg
     2881 acgcggttgc cggaggcttc gatgagcgcg aagcgcaact ctttgggcgg aaagtcgatg
     2941 gatgagaaat agcgcgaaat tcttccctcc ggggtgagaa ccagagtatt ggctgcatgg
     3001 atgaaacttt ccttgccggc gctttggctc gggcggtagc gaaaacccgc ggcttgggtc
     3061 agcgcgtcga tggtttggac cggggcggtg agaaagtgcc agctggcggc gccgtgaagc
     3121 gctttcttct tgcgcgccgc cagcgctgcg gtttcggctg gatcgatgct gaccgcgatt
     3181 acttgataat cctcgcccgc caggcgcaac acgcgcaagc tgcgcccgag tccctccaag
     3241 actagtggac aaagctgcgg acagtcgtag taaacaaaag ccaggagcac cggtttgccg
     3301 gtgaaataac gccgcagtgt tactgccgcg ccggtttcgt cgcgcagggc gagatccaag
     3361 ggcagctggt tatccaaacg ttcctcgatg gtgaccgaat ccagcaacgc cttctggcga
     3421 tcgccatcat gggcgagggc tggggtgacc agaacaaacg ctagtagggt aataataatg
     3481 aaacttggca tctggttgtt tttaacgttc aaatcgttca atcgctgcgc ttcgttcaag
     3541 ccgttcacac cgtctcggac gcaattaaaa cctcttggaa gacgaagcgc agcgcttgaa
     3601 cggagcgaca gcgcttgaac ggagcaacgc gattgaacgg tttgaacggc tttatttttt
     3661 ccgcgccggc aggccgcgct gcgccgtcag ttccatggcg cgctcgatgg ggatgcgcac
     3721 gacccctttt ttcttgtcga tccaaccgta gctgtgcaag attttgtttt cggcggcgcg
     3781 catttccgcc atctcgctgc gcggcgatat ttgcagtggc gggccggtgg ttggcggcat
     3841 gctttgccgg atgccgacag gatcatggcc aagccggctt tcccgtttgc tgaaaaaatt
     3901 aaacagccag aagagaaaca ccatgatcag caccacggcg gcggccaaac cgacgcccca
     3961 ataagtgata cggcgcagat cgacatcgct gctttcgtgg ctgactgcgg gattgtcctg
     4021 ccgcggcgcg tgggcgtgct caaccatggt cgatggcctc gcaggcgttg gggtcgtgca
     4081 gcggccatag cggccgctgg cgcaaattgc gcaagaacat cgccagccag acgccgccga
     4141 gacctacggg cgcggcaata tccatccaat gaatcgtcaa acggccggga ttaaaggccg
     4201 gggcggtgta ccagaaaata tcgatcatgc gcatgatgat tagggcaccg gcgaccgccg
     4261 ccaatgcggg cgccggccgt ttgacttggc gcgacaacag caacaggaag ggcacgataa
     4321 aatggaaggt gaccaagata atcacgatcc actgccaacc gccgcggttg cggcgcaggt
     4381 accacgagat ttcctccggc aagttgcccg accaga
//
LOCUS       DATIRS010000403         1613 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1113038, whole genome shotgun sequence.
ACCESSION   DATIRS010000403 DATIRS010000000
VERSION     DATIRS010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1613
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1113038"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(102..>1613)
                     /locus_tag="VLM90_05030"
     CDS             complement(102..>1613)
                     /locus_tag="VLM90_05030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12355.1"
                     /translation="LKICLPEVSFTPAIALPLDFAETLATAEDAIKNIVQGWLEVSGP
                     VSTAALATRIGLPVNRVAAALLALESAGAAMRGQFTGRMLGAQIAHSGQDGEAVEWCD
                     RVLLARIHRLTLGKMRREIEPVSAADFVNFLIHWQHAAPGSRLRGRDGVLRVIEQLQG
                     LELPAPAWEQHVLPARIETYDPADLEYLCLGGIVAWGRLRNDTLPEELSQPKTSSGKR
                     LKRLLAPARNAPIGFILRDELENYLEPMHGRYTEIPSLSAMALEVARYLEQRSASFLA
                     DIARDTGLLKVKVEEALWQLVAHGLASGDGIAGLRVLLTPERKRVERRRSLRLINGGR
                     NSERAMPAGRWSLWRGQFSKLEVSGTSRMERQARQLLQRYGVVFRDLLARESSNGCWG
                     SWRNLLAIYRRLEARGEIRGGRFVNGFVGEQFALPAAVERLRELRRGQAATSEILLAA
                     ADPLNLAGILTPGPRISPYSNQTLAYRNGEMVDSGLLGELMSRLQSPERSNRT"
BASE COUNT          327 a          512 c          480 g          294 t
ORIGIN      
        1 caaggcgtga cccgcggtta cagcgaactg gataacaaaa acttttagtt aacaccgaga
       61 attcgcgccc gctagttttc gtctaccgtg agcgtcaacg atcaagttcg attgctacgt
      121 tctggcgatt gcagacgact catcagttcg ccgagaagac ccgagtcgac catttcgccg
      181 ttgcggtaag cgagggtttg gttggaatag ggcgagatcc gcggccctgg ggtcagtatc
      241 ccggcaagat tcagtggatc ggcggcggcc agcaatattt cgctggttgc cgcttggccg
      301 cggcgcaact cacgcaagcg ctccaccgcc gccggcaagg caaattgctc accgacaaag
      361 ccattgacga aacggccgcc gcggatctcg ccgcgcgcct ccaagcggcg gtaaatcgcc
      421 agtaaattac gccaactgcc ccagcagcca ttgctggatt cgcgcgccaa taggtcgcga
      481 aacaccacgc cgtagcgctg taacagctgg cgcgcctggc gttccatgcg gctcgtgccg
      541 ctgacttcta gtttcgagaa ttgcccgcgc cacagcgacc agcgccccgc cggcatggcc
      601 cgctcggaat tgcgcccgcc gttaatcaag cgcagactgc gacgccgttc gacacgcttg
      661 cgttcgggag tcaggagcac gcgtaagccg gcgatgccgt cgccgctagc taacccatga
      721 gcgaccagtt gccagagcgc ctcttcgact ttcactttga gcaagccggt gtcgcgggcg
      781 atatcggcga gaaaagacgc actgcgctgc tcaagatagc gtgccacctc cagcgccatg
      841 gccgacaggc tcgggatctc ggtgtagcgg ccgtgcatcg gttcgagata attttccagc
      901 tcgtcacgca ggataaaacc gatgggcgca ttgcgcgccg gcgccagcaa ccgtttcaac
      961 cttttgccgg aagaagtctt cggctggcta agctcttcgg gcagggtatc gttgcgcaac
     1021 ctgccccaag cgacgatgcc gcctagacag agatattcca ggtcggcggg gtcgtaagtt
     1081 tcgatgcgcg ccggcagcac atgctgctcc caagccggcg cgggcaattc caagccctgt
     1141 aactgttcaa tgacccgcag cacgccgtcg cggccgcgca atctgctacc cggcgcggcg
     1201 tgttgccagt gaataagaaa attgacgaag tcggcggccg ataccggttc gatctcgcgg
     1261 cgcatcttgc ccagggtcaa acgatgaatg cgcgcgagca agactcgatc gcaccactcg
     1321 acagcttcgc catcttggcc actgtgggca atttgggcgc caagcatacg cccggtaaac
     1381 tgaccgcgca tcgccgctcc cgcgctttcc aaggcgagca gcgcggcggc aactctattg
     1441 accggcaggc cgatgcgcgt ggccagcgcc gcagtgctga ccggcccgct cacttcgagc
     1501 cagccttgaa cgatgttctt gatggcgtct tccgccgtcg caagggtctc ggcaaaatcg
     1561 agcggcagcg ctatcgcggg agtgaaagaa acctccggta aacagatctt gag
//
LOCUS       DATIRS010000404         2542 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_326167, whole genome shotgun sequence.
ACCESSION   DATIRS010000404 DATIRS010000000
VERSION     DATIRS010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2542
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_326167"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1043)
                     /locus_tag="VLM90_05035"
     CDS             complement(<1..1043)
                     /locus_tag="VLM90_05035"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12356.1"
                     /translation="MIRSLAVPGLCLYIAASCVLAYYFPQSVLAFLLVEASLLLLYYS
                     PVSGRVKNLLGALILLVLLPVLGFSNAYYFEIAIQIGIFVALALGLNIVVGFVGLLNL
                     GFVAFYAIGAYLWAVFGSPQANHFIAGGWFPLSPNWFFVFLILSIAVGAATGALLGLP
                     VLRLRGDYLAIVTLGFAEVVRALVNNLDKPINLTNGPKGIAPIAKPPLFFKPLLEFFG
                     VQVADAALYPLYFYFLVLLLVFTIILVTQRLENSRVGRAWKAIREDEIAASAMGVPVV
                     RMKLLGFAVGASFASAVGVLFAAKQVFINPESFTFMESIGVLAMVIIGGMGSVPGAIL
                     GATGVTILNLQLL"
     gene            complement(1040..2008)
                     /locus_tag="VLM90_05040"
     CDS             complement(1040..2008)
                     /locus_tag="VLM90_05040"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSQ12357.1"
                     /translation="MEIALEILPQVLLDGIVLGFMYALIALGYTMVYGVLEFINFAHS
                     EIFVLGAFVGVEVLLLLQSAGLLATLHPGVILLLVIVTGMTISGLAAMTLERIAYRPL
                     MGGPRLVALISAIGASFFLQDALRLFESLWRNTFYLNYPSLDFLDHNLPLTASLVMPV
                     KSLLVIVTAILTLFGLHFFVNRTRMGMAIRAVAQDPDTAALMGVPVNRVIALTFFVGG
                     ALGGLAGVLFGIHYSLVNPYSGFVPGMKAFTAAVLGGIGNIPGAMVGGMLLGLLEAFA
                     ASYLSLLTNGAFGAEYKDVVAFVVLIVILIFRPKGLLGEAVRESKA"
     gene            2136..>2542
                     /locus_tag="VLM90_05045"
     CDS             2136..>2542
                     /locus_tag="VLM90_05045"
                     /inference="COORDINATES: protein motif:HMM:NF017021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HSQ12358.1"
                     /translation="MSDTAITPALALAAANNKFIKGLLIGGGAFAALLTLLLVVPHFV
                     DLGLFKATYLPLVEDALGRRIDVGEVHLRLVPTPSIQISKLRVSDSQSYADNTFFAAH
                     QVQLKLKFVPLLRGRFEVTELVLDKPIFNLLKQA"
BASE COUNT          659 a          761 c          706 g          416 t
ORIGIN      
        1 ttgaggagct gtaaattcag tatcgtcacg ccggtggcgc cgagaatcgc accgggcacc
       61 gagcccatcc cgccgataat aaccatggct aacacaccga tggattccat gaaggtaaag
      121 ctctcgggat tgataaacac ctgcttggcg gcgaacaaca cgccgacggc ggaagcgaac
      181 gaagcgccga cggcgaagcc caataacttc atgcgcacga ccggtacccc catcgcggat
      241 gcggcgatct catcctcgcg aatcgctttc caggcccggc cgacgcgcga gttctccagt
      301 ctttgagtaa cgagaataat cgtaaacacc agcaacaaga cgagaaagta gaaatacagc
      361 ggatagagcg cggcgtcggc aacctgcacg ccgaagaatt ccagcagcgg tttaaaaaac
      421 agcggcggtt tggcgatcgg cgcgatgccc ttgggtccgt tggtcagatt gatcggcttg
      481 tctaaattgt tgaccagggc gcgcaccact tcggcaaagc cgagcgtgac gatagccaga
      541 taatcgccgc gcagccgcag caccggcaag cctaacagcg cgccggtggc ggcgccgacg
      601 gcaatgctga gaatcagaaa aacaaaaaac caattgggcg acaacggaaa ccagccgccg
      661 gcgatgaaat ggttcgcctg cggcgagccg aacaccgccc atagataggc gccgatggca
      721 tagaaggcga cgaaaccaag attgagtaaa ccgacaaaac caacgacgat gttgagcccc
      781 agggcgagcg cgacgaagat gccgatctga atcgcgatct cgaaataata agcattcgaa
      841 aaacccaaga ccggcagcag caccaacaat atcagcgcgc cgagcagatt tttcacccgg
      901 ccgcttaccg gggaatagta gagcaaaagc agcgacgcct cgaccagcaa aaacgccagc
      961 accgactgcg gaaagtaata ggcgagcacg cagctcgccg cgatgtaaag acagagtccg
     1021 ggcaccgcca gtgaccggat catgccttgc tctcccgcac cgcctcgccg agcagaccct
     1081 tgggtcgaaa gatcaagatc acgatcaaga cgacgaacgc caccacgtct ttgtactcgg
     1141 cgccaaaggc gccgttggtg aggagcgaaa ggtaggacgc cgcgaacgct tccagcagtc
     1201 cgagcagcat gccgccgacc atggcgccgg gaatattgcc gatgccgccg agcacggcgg
     1261 cggtgaaggc cttcatcccc ggcacaaagc cggaataagg attgaccaga ctgtaatgaa
     1321 tgccgaacaa caccccggcc aagccgccga gcgcgccgcc gacgaagaaa gtcagcgcga
     1381 tgacgcgatt gaccggcacg cccatgagcg ctgcggtgtc gggatcttgg gcgacggcgc
     1441 ggatcgccat gcccatgcgc gtgcggttga cgaagaaatg cagcccgaac agcgtcagga
     1501 tcgccgtgac gatcaccaat aacgacttca ccggcatgac caacgacgcc gtgagcggca
     1561 agttatgatc gaggaagtcc agactaggat aattgagata aaaggtgttg cgccacaggc
     1621 tttcgaacaa acgcagggcg tcctgaagaa agaacgaagc gccgatggcc gagatcagcg
     1681 ccaccaatct cggtccgccc atgagcggac ggtaggcgat ccgttccagt gtcatcgccg
     1741 ccagaccgct gatcgtcatg ccggtgacga tgacaagtaa cagaataacc cctggatgca
     1801 gcgtcgccaa caggccggcg ctctgcagca gtaagagcac ctcgacaccg acgaaggcgc
     1861 ccaggacaaa tatttcgcta tgggcgaagt tgatgaactc cagcacccca tagaccatgg
     1921 tgtaacccaa agcgatgagc gcgtacatga aacccaacac gatgccgtcg agcaaaactt
     1981 gcgggagaat ttccagcgcg atttccaagc agttgtgaac ccttcaggga ccgcatgcta
     2041 acaaatagtt gtttgcctgg ctacccgccg gcacaatcta attatttgga ttagccggct
     2101 attgacgtat aatggctatc gataggcagt caaccatgtc agacacggca atcacaccgg
     2161 cactcgctct cgctgccgca aacaataagt ttataaaagg cctgctcatt ggcggcggtg
     2221 catttgccgc actgctcacc ctcctgctgg tcgtacccca ctttgtcgac ctgggtctgt
     2281 ttaaggccac ttatctgccg ctcgtcgaag acgctctcgg ccggcgcatc gatgtcggcg
     2341 aagtacactt gcgcctggtg ccgacgccgt caatccaaat ctccaagctg cgcgtctccg
     2401 acagccaatc gtacgccgat aacactttct tcgccgccca tcaggtacag ctcaaactga
     2461 agttcgtacc cttgctgcgc ggccgcttcg aagtcaccga gctggtgctc gacaagccga
     2521 tttttaattt gttgaagcaa gc
//
LOCUS       DATIRS010000405         1813 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1309381, whole genome shotgun sequence.
ACCESSION   DATIRS010000405 DATIRS010000000
VERSION     DATIRS010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1813)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1813)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1813
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1309381"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1139
                     /locus_tag="VLM90_05050"
     CDS             <1..1139
                     /locus_tag="VLM90_05050"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSQ12359.1"
                     /translation="KTLLGVELPLIWPALFSAVIWMFTVAIAAFDVPGVIGMANNIFT
                     FSTAIYFMINPNEGLPRYGLSGAYGTIMVGLSLIMMIPYFIALKQSHKYQIISGKAYQ
                     PRPVELGRWRWSAWALLGLYFTLAFVLPLLAIFWVSLLPYVQAPSWQALSSLTFERYS
                     AAAFDRAILDAALNTILLMVAVPTLIVLICAAVSWIVTRSKFRWRVALDAVAFLPHPV
                     PNLLFALAIAYLALLVSNVVPLYGTIFVIMAVYIVCWISFGTRVLNNSMIQVHRELEE
                     AAQVGGVSSFKILARIIVPLIKPGLVYTWIWTSLSAYRELTMAVFLSSPKSQVLSTYI
                     WGQWHGGGLGDAAAIAIMMIAVMSPVVTSFWIYARKQQQVAGSA"
     gene            1500..>1813
                     /locus_tag="VLM90_05055"
     CDS             1500..>1813
                     /locus_tag="VLM90_05055"
                     /inference="COORDINATES: protein motif:HMM:NF015549.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HSQ12360.1"
                     /translation="MSFAARFRQGMKAAIPIWIAFVPSSLAWGIAAQAHGLTLEEIVL
                     MSAWVYSGPAQFAVLVPLAEGKSAATVLIAGLLMNLRFLPMSMALAPFFRGVKRLPLL
                     IAS"
BASE COUNT          311 a          493 c          552 g          457 t
ORIGIN      
        1 tcaagacact ccttggcgtg gaactgccgc tgatctggcc ggcgctgttc tcggcggtga
       61 tttggatgtt cactgtggcg atcgcggctt tcgatgtgcc gggcgtgatc ggcatggcca
      121 ataatatttt taccttcagc acggcgatct atttcatgat caatcccaac gaaggcttgc
      181 cgcgctacgg tctgagcggt gcctacggca cgatcatggt cgggttgtcg ctgatcatga
      241 tgatcccgta tttcatcgcc ctcaagcaga gccacaagta tcaaatcatt tccggcaagg
      301 cctatcagcc gcggccggtg gagttgggcc gctggcgctg gtcggcgtgg gcactcttgg
      361 ggctctactt cactttggcg tttgtcctgc cgctattggc gatcttttgg gtgtcgctct
      421 tgccctatgt gcaagcgccg tcctggcaag cgctgtcctc gctcactttc gagcgctaca
      481 gcgcggcggc cttcgacagg gcgatcttgg atgcggcttt gaatactatc ctcttgatgg
      541 tcgccgtgcc gacgttgatc gtgctgatct gcgcggcggt ttcgtggatc gtcacgcgct
      601 caaaatttcg ctggcgggtg gccttggacg ccgtcgcgtt tctaccgcat ccggtgccca
      661 acctgctctt cgccctggcg atcgcctact tggcattgct ggtctccaac gtcgtgccgc
      721 tgtacggaac tatctttgtc atcatggctg tctatatcgt ctgctggatc agtttcggca
      781 cccgggtatt gaacaacagc atgatccaag tgcatcgcga gctggaagaa gcggcgcaag
      841 taggcggcgt gtcgtctttt aaaatacttg ccagaatcat cgtgccgctg atcaagccgg
      901 ggctggttta cacctggatc tggacctcgc tgtcggcgta ccgcgaatta accatggcgg
      961 tttttctctc gtcgccgaaa agccaggtgc tgtcgactta catctgggga cagtggcatg
     1021 gcggagggtt gggcgacgcg gccgcgatcg cgatcatgat gatcgcggtg atgtcgccgg
     1081 tggtgacgag tttttggatc tacgcgcgca agcagcagca ggtggcggga tcggcgtagg
     1141 gaaagcgcat ggaattggcc gcatagaact tagcgcggca gagccgcaac caaacgggaa
     1201 agagtttcac caagaagctc acgaaggaca cgaagggttc ggaaaattat tactccgaac
     1261 ttcgtgctct tcgtgtcctt cgtggtgaga ttggatttct tcattgagca cggcaactta
     1321 ggagtaccgg tacggcaaat ttgcgcaagc cacgcaatct ttgagctatt gcaatgcaaa
     1381 ggtcgcaaaa taagtcctgt aggggcgcag catgctgcgc ccgtttccgg cgccgtcgaa
     1441 cctcaatatt tgttttgcgc ttcattgatc ttcctagctt cctccgctaa gcgagtgtaa
     1501 tgtcttttgc cgcgcgattt cgccagggga tgaaagcggc gattccgatc tggatcgcct
     1561 tcgtgccttc gtctcttgcc tgggggatcg cggcgcaggc ccatgggctg acgcttgagg
     1621 agatcgtact gatgtcggcg tgggtttatt ccgggccggc gcagttcgcc gtgctcgtgc
     1681 cgctcgccga aggcaagtcg gcggctacgg tgttgatcgc cggcttgctg atgaatttgc
     1741 gcttcctgcc catgagcatg gcgttggcgc cgtttttccg cggcgtgaag cgcttgccgc
     1801 tgttgatcgc ttc
//
LOCUS       DATIRS010000406         2403 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_621404, whole genome shotgun sequence.
ACCESSION   DATIRS010000406 DATIRS010000000
VERSION     DATIRS010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2403
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_621404"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            132..1022
                     /locus_tag="VLM90_05060"
     CDS             132..1022
                     /locus_tag="VLM90_05060"
                     /inference="COORDINATES: protein motif:HMM:NF013465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HSQ12361.1"
                     /translation="MFAGALCGLYSRLEAQPIRVITSIPDLADITKQIGKEFVSVESL
                     TRGVEFMHAVPVKPSFVPKLNRANILVEMGMDLEISWLPALLEVANNARILPGQPGNI
                     DCSVGVSVLEVPRTVDRSEGDVHPKGNPHYNVDPVNGRIIARNIAEGLTRNYPQHRAV
                     FEKNLGAYLAELDKAIARWQSMAAPLKGVKIVTYHQDWSYFAHRFGLQPIGMIELKPG
                     IEPTPNHLVALAQKMQQEKVQVIIYGPQSDRFPRQLATQTGASVVRLQSTAGALAETD
                     TYIKFVDYNLRSLLVAVKKG"
     gene            1073..1753
                     /locus_tag="VLM90_05065"
     CDS             1073..1753
                     /locus_tag="VLM90_05065"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSQ12362.1"
                     /translation="MSEAAALVRLHRADLGYYDTTILHNVGVEINPGELVAMAGPNGS
                     GKTTLFRTILGFLPVLGGSFTRSCPLSEFGYVPQSAALDAAFPVTVREIIEMGAYGRL
                     KPFKRLLAAEKSRIDGVLEQVGLAHLAARSFFSLSGGQKQRILIARALMVGPKILILD
                     EPLSGVDTESRAAITELLLTINRQEGKAIFFSSHDLRMVRSVTTKILRVDQGQVVWEE
                     GAAADHPW"
     gene            1747..>2403
                     /locus_tag="VLM90_05070"
     CDS             1747..>2403
                     /locus_tag="VLM90_05070"
                     /inference="COORDINATES: protein motif:HMM:NF013143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HSQ12363.1"
                     /translation="MVSFLEVLSPSFLLFPALLGSAILGFVCPLVGAHLMLRRRIFLG
                     LTLPQIAACGVAFTFWLYHWLGLAHGAGGERLLAMAGSLLFTLAGMGLLAYLDRRATG
                     SPEGRLAAAYALASALTILFVVFNPAGELEILNLLKGEVISLSKEELKLLAIVYGVVY
                     FALVLFRREFLLNSFDRDLSFLLTGGGVQWSVWLYVLCGFSIAIGVIMAGPLLVFGFM
                     V"
BASE COUNT          452 a          680 c          719 g          552 t
ORIGIN      
        1 ggccatcaat tctttttaca gtggacgaca gtgctgggta gccacacgca tggctttcgc
       61 aaccgttaag cggcgcgatc cagggagata tatttatgaa attgcttcga aggacattga
      121 tttagatttt attgttcgcc ggcgcgctat gcggtttgta cagccggctt gaagcccagc
      181 cgatacgcgt catcacgtcg atccccgatc tggccgatat caccaagcag atcggcaagg
      241 agttcgtgag cgtggaaagt ctaactcgag gcgtcgaatt catgcatgcc gtgccggtca
      301 agccgagctt cgtgcccaag ctcaaccgcg ccaatatctt ggttgagatg gggatggatc
      361 tggagatttc atggctgccg gccttattgg aagtcgccaa caatgcgcgg atattgccgg
      421 gccagcccgg taacatcgat tgctccgtcg gagtcagcgt gctcgaagtg ccgcgcacgg
      481 tggatcgttc ggagggcgac gttcatccca aaggcaatcc gcactacaac gtagatcccg
      541 tgaacggcag gatcatcgcc cgcaacatcg ccgaaggatt gacgcgcaat tatccgcaac
      601 accgggcggt gttcgagaaa aatcttggcg cctacctggc ggaattggac aaggcgatcg
      661 cgcgctggca gagcatggcc gcgccgttaa agggcgtgaa aatcgtcacc tatcaccagg
      721 actggagtta cttcgcccat cgcttcggtt tgcagccgat cggcatgatc gagctaaagc
      781 ccggcatcga gccgacgccg aatcatctgg tcgcgctggc gcagaagatg cagcaggaaa
      841 aagtccaggt gattatctac ggtccgcaga gcgaccgttt tccgcggcag ctcgcgacgc
      901 agacgggggc gagcgtggtg cgcctgcaaa gcacggccgg cgcccttgcc gagaccgaca
      961 cttacatcaa gttcgtcgac tataatctgc gcagcttgct cgttgccgtc aaaaagggtt
     1021 aaagcagcaa ccataatgat cgaaatcaga cgccaccaat gcgggtgcgc ccttgagtga
     1081 agcagccgca ttggtgcgtt tgcaccgagc cgatctcgga tattatgaca cgacgattct
     1141 tcacaacgtc ggcgtcgaaa taaatcccgg ggaattggtc gcgatggcgg ggcctaacgg
     1201 ctcgggcaaa acgactctat tcaggactat tctcggattt cttcccgtcc tgggcggctc
     1261 ctttacgcgc agctgcccgc tgagcgagtt cggctacgtt cctcagagcg cggcgttgga
     1321 cgccgctttt ccagttaccg ttcgcgagat cattgagatg ggcgcctatg gccggctcaa
     1381 gccgttcaag cgtttgctgg ccgccgagaa gagcaggatc gatggagtgc tggaacaagt
     1441 cggtctggct cacctggcgg cacgctcgtt tttctctctg tccggcggac agaagcagcg
     1501 catcctgatc gcccgcgcgc tgatggtggg accaaaaatt ctcattctcg acgaaccgct
     1561 gtcgggtgtg gacacggaat cgcgcgcggc cattaccgag ctgctgctca cgatcaatcg
     1621 gcaggaaggc aaggcaatat tcttttccag ccatgatctg cgcatggtgc gcagcgtcac
     1681 gacgaaaatt ctccgggtcg atcaaggcca agtggtttgg gaggaagggg ctgcggcgga
     1741 tcatccatgg tgagctttct cgaagtgtta agtccatcgt tcctgctctt cccggctttg
     1801 ctcggtagcg cgatcctggg gttcgtttgt cccctggtcg gcgcccattt gatgctccgg
     1861 cggcgcattt ttctcggcct cacgttgccg cagattgccg cctgcggcgt ggcttttact
     1921 ttttggctct atcattggct gggattggcg cacggagccg gcggcgagcg cctcctggcg
     1981 atggcaggtt cgctgctgtt tactctcgcc ggcatgggct tgctcgccta tctcgaccgg
     2041 cgcgcgaccg gttcgcccga gggccggctt gccgccgcct acgcgctcgc ctcggcgctg
     2101 acgatcctat ttgtcgtctt caatcccgcc ggcgagctgg aaattctcaa cctgctcaaa
     2161 ggcgaggtga tttctctgtc gaaagaagag ctcaagctcc tggccatcgt ctacggcgtc
     2221 gtctacttcg ctttggtgct ttttcgtcgc gagtttttgc tcaactcttt cgaccgcgat
     2281 ctatcgtttc tgttaaccgg cggcggcgtg cagtggagcg tttggctcta tgttctgtgc
     2341 ggtttcagca tcgcgatcgg agttatcatg gcgggtccgt tgttagtgtt cggcttcatg
     2401 gtg
//
LOCUS       DATIRS010000407         2444 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_326336, whole genome shotgun sequence.
ACCESSION   DATIRS010000407 DATIRS010000000
VERSION     DATIRS010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2444
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_326336"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..790)
                     /locus_tag="VLM90_05075"
     CDS             complement(<1..790)
                     /locus_tag="VLM90_05075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12364.1"
                     /translation="MSNPALVSLHGLGQCGCCTGVTQSTPGALFNRPGLSALAYRIGT
                     HSAFKQSFLAALSRAEFSALQQLRSRADDDFTIALLDAAATMADVLTFYQERMADEAF
                     LRTAGERRSVLELARLIGYELHPGVAASAVLAFSLDTAPGAPAQTYIDAGTRVQSIAG
                     PNEKPQTYETIEKVEARVAWNALTAQRSEVRVPVFGDRFLYLKGIATNLRAGDAILLV
                     GKEREDNPGREEWDFRRISAVEADAEGNRTRIAWAEGLGTTSPHK"
     gene            complement(787..>2444)
                     /locus_tag="VLM90_05080"
     CDS             complement(787..>2444)
                     /locus_tag="VLM90_05080"
                     /inference="COORDINATES: protein motif:HMM:TIGR02243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="putative baseplate assembly protein"
                     /protein_id="HSQ12365.1"
                     /translation="PDDPQLRAQAQAIFEPMETVSLFADHNDFALYTWSDQRCCLPKG
                     ATSATLKDFHPDLKPGHVLIFEEVLNPHTGGSKDADPKHRWAVRLVNVQARDENNQPL
                     RDQLTNQQITQIAWADADALAFPFCLSAQTDKSHGAQFIDNVTVVRGNIVLADHGGTI
                     GGEELGSVGAALPVAPTSTGCERCAPPDREPIAPRFRPTLAKRPLTFAAPYDQTAASA
                     AMVWSERAGEAQIKLTGVDQGDPTPWQARADLLQSAADDNHFVVEIENDGQAQLRFGD
                     DTLGRRPKSETEFTADYRIGNGAGGNIGAEALAHVHTGNALLAAAISEIGNPLAARGG
                     VEPETMEQVRAYAPAAYRTQKRAVTEADYAAVAGRHPGVQRALATFRWTGSWHTVFIT
                     VDRQQGKPVDGAFEASVRRFVEPFRMAGHDIEVDGPLPVSLEIAMHVCADPAYFRADV
                     KRELLELFSTREFADGRLGLFHPDNFTFGQTVYLSPLIAAAQAVAGVTSVQIDKFQRQ
                     GKPDNKPLAAGKLELGRLEIARCDNDGNFPEHGVFNLSVGGGK"
BASE COUNT          424 a          793 c          767 g          460 t
ORIGIN      
        1 ctttgtgcgg cgaagtcgtg cccaaacctt cggcccaggc gatgcgcgtg cgattccctt
       61 ctgcgtcggc ttcaaccgcg ctgatccggc ggaagtccca ttcctcccgt cccggattgt
      121 cttctcgttc tttgccgacc agcaagatcg catctcccgc tctaagattg gtagcgatac
      181 ccttgagata gaggaagcgg tcgccgaata ccggaacacg cacttcgctg cgctgcgccg
      241 tcagcgcgtt ccacgcgacc cgcgcttcaa ccttttcgat ggtctcgtag gtctgcggtt
      301 tttcgttcgg gccggcaatg ctctgcaccc gggtgccggc gtctatatat gtctgcgccg
      361 gcgcgcctgg cgcggtgtct agagaaaacg ccagcaccgc gctcgccgcc acgccgggat
      421 gaagttcgta gccgatcagc cgagccaatt ccaagaccga gcggcgctcg ccggcggtgc
      481 gcagaaacgc ctcgtcagcc atgcgttctt ggtaaaacgt cagcacatcg gccatggtcg
      541 ccgcggcgtc gagcagcgcg atggtgaaat cgtcatcggc gcggctgcgc agttgctgca
      601 acgccgaaaa ctcggcgcgc gacaaggccg ccaggaagct ctgtttgaat gcgctatggg
      661 tgccgatgcg gtatgccaga gccgacagtc cgggccggtt gaaaagcgcg ccgggagtgc
      721 tttgggtcac gccggtgcag cagccgcact gccccaggcc atgcagcgat accagggccg
      781 ggttgctcac ttgccacctc cgacgctgag attgaaaacg ccatgctcgg ggaaattgcc
      841 atcgttatcg cagcgggcaa tctccaaacg gcccaattcc agcttgcccg cggccagcgg
      901 cttgttgtcg ggcttgcctt ggcgttggaa tttatcgatc tgcaccgagg tcacgcccgc
      961 caccgcctgc gccgcggcga tcaacgggct caaataaacc gtttgtccga aagtgaagtt
     1021 atccggatgg aacaaaccca gccggccgtc ggcgaactcc ctggtgctga acaattccag
     1081 caactcgcgc ttgacgtcgg cgcggaagta ggccggatcg gcgcacacgt gcatggcgat
     1141 ttccaacgac accggcagcg gtccgtcgac ttcgatgtca tgacccgcca tgcgaaaagg
     1201 ttcgacaaac cggcgcaccg aggcttcgaa ggcgccatcc accggcttgc cctgctgccg
     1261 atccacggtg ataaagaccg tgtgccagct gccggtccaa cgaaaggtcg cgagcgcgcg
     1321 ctgcacgccc ggatggcgtc cggccaccgc cgcgtagtcg gcttcggtga cggcgcgctt
     1381 ctgggtgcga taggctgccg gcgcgtaggc gcgcacttgc tccatggtct ccggctcgac
     1441 gccgccccgg gccgccagcg gattgccgat ctcgctgatc gccgcggcca acagcgcgtt
     1501 accggtgtgc acatgggcca gcgcttcggc gccgatattg ccgccggcgc cgttgccgat
     1561 ccgatagtcg gcggtaaatt cagtctccga cttggggcgc cgtccaagcg tatcgtcgcc
     1621 gaagcgcagc tgcgcctggc cgtcattttc gatctcgacc acgaagtggt tgtcatccgc
     1681 agcgctctgc agtaaatccg cgcgcgcttg ccagggcgtt ggatcgcctt ggtcgacacc
     1741 ggtaagtttg atctgcgctt cgccagcgcg ttccgaccag accatcgccg cgctggccgc
     1801 ggtctggtca tatggcgcgg cgaaggtcag cggccgcttg gcgagggtgg ggcggaagcg
     1861 cggcgcgatc ggctcgcgat ccggcggcgc gcagcgctcg cagccggtgc tcgtcggcgc
     1921 caccggcaat gccgcaccga cactgccgag ctcttcgccg ccgatcgtcc cgccatgatc
     1981 cgccaagacg atattgccgc gcaccaccgt gacattgtcg ataaactgcg cgccatggct
     2041 cttgtcggtc tgcgccgaca gacaaaaggg aaatgccaag gcatcggcat cggcccaagc
     2101 gatctgggtg atttgttgat tagtgagctg atcgcgcagc ggttgattat tttcgtcgcg
     2161 cgcttgaacg ttgacgagcc gcacagccca acgatgcttt ggatcggcat ccttgctccc
     2221 gccggtatga ggattgagca cctcttcgaa gatcaaaaca tgacccggct tgagatcggg
     2281 gtgaaaatct ttgagcgtcg cactggtcgc gcccttgggc agacagcagc gctgatcgct
     2341 ccaggtgtag agcgcgaaat cattgtgatc ggcgaacagg ctgaccgttt ccatcggctc
     2401 gaagatcgcc tgcgcctggg cgcgcagctg cgggtcatcc ggca
//
LOCUS       DATIRS010000408         1609 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_719838, whole genome shotgun sequence.
ACCESSION   DATIRS010000408 DATIRS010000000
VERSION     DATIRS010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_719838"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..364
                     /locus_tag="VLM90_05085"
     CDS             <1..364
                     /locus_tag="VLM90_05085"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSQ12366.1"
                     /translation="FAFIGDGAFHYNAVPSCLGVAEEYGLPIHCVIFNNGRYLSMETS
                     LIKYFPAGAAKTTGVHFGAEIGPRPDYQHYAKAHGGEGFRITNPKDIAKAVEQALKCE
                     QEKKLTVIDLVLSDLNPR"
     gene            complement(395..1252)
                     /locus_tag="VLM90_05090"
     CDS             complement(395..1252)
                     /locus_tag="VLM90_05090"
                     /inference="COORDINATES: protein motif:HMM:NF013961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HSQ12367.1"
                     /translation="MFFEISHKTIYTYSRPVFLELHHLRIRPRCDAVQNVKHFESKID
                     PRPAGSTDGIDIDGNVVENVWFQGLTEKLVVASRAKIVTQYRNPFNYILAERADRLPV
                     SYQDPLQAYLAPYTVRRNESHLVEQFARQIANRTEWKTLRFLTMLTREISESFQQTER
                     GVGAPRSAEETFLSRVGSSRDMAVLFIDACRYVGIAARFVNGYCQDGGTKDRLSLHSW
                     GEVYLPGVGWRGYDPGQGLAVSDRHVAIAAAGDPLLAAPVSGTFRGNAITSELRAEID
                     ITVASADAA"
     gene            complement(1296..>1609)
                     /locus_tag="VLM90_05095"
     CDS             complement(1296..>1609)
                     /locus_tag="VLM90_05095"
                     /inference="COORDINATES: protein motif:HMM:NF016086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-E domain-containing protein"
                     /protein_id="HSQ12368.1"
                     /translation="IINFLVLDHEFPRSIHYCLTTANDSLHAISGTPIGMYRNTAEQR
                     LGQLRAELAYTDTQQIVERGLHEFLDGFQTKLNLVDQCIFDTFFALRPVGSGAPDRVG
                     Q"
BASE COUNT          351 a          459 c          470 g          329 t
ORIGIN      
        1 cttcgcgttc atcggcgacg gcgcgtttca ttacaacgcc gtgccatcgt gtttgggcgt
       61 cgccgaggag tacggcctgc cgatccactg tgtgatcttc aacaacggcc gctatctgtc
      121 catggaaacc agcttgatca aatatttccc cgctggcgcg gcgaaaacca ccggcgttca
      181 cttcggcgcc gagatcggcc cgcgtcccga ttatcagcac tacgccaaag cccatggcgg
      241 cgaaggcttc cggatcacca acccgaagga catcgcgaag gccgtcgaac aagcgctgaa
      301 gtgcgagcag gaaaagaaac taacggtgat cgacctggtg ctgagcgatt tgaatccgcg
      361 ctagattcaa ggcctcgttg aaaataaatc gcgtttacgc cgcgtcagcg ctggcaaccg
      421 tgatgtcgat ctcggcgcgg agttccgagg taatcgcgtt gccgcgaaac gtgccgctca
      481 cgggagccgc gagcagagga tccccggctg cggcaatggc cacatggcga tcgcttacag
      541 cgagaccctg tccgggatcg tagccacgcc aaccgacgcc cggtagataa acttcgcccc
      601 aggagtgcag cgagagtcga tcttttgtgc cgccgtcttg gcaatagccg ttgacgaaac
      661 gagccgcgat gccgacatag cggcaagcgt cgatgaataa aaccgccata tcgcggctcg
      721 atccgacccg gctcaaaaaa gtttcttcgg cgcttctcgg cgccccaacc ccccgttctg
      781 tttgttgaaa gctttcggag atttcccgcg tgagcatcgt caggaaacgc aaggttttcc
      841 attcagtccg attggcgatc tgacgggcga attgttcgac caagtggctc tcgttccgac
      901 gcacggtata aggggcgagg tacgcctgaa gcggatcctg gtaactaacg ggcaggcggt
      961 cggcccgttc ggcgagaata taattgaacg gattgcggta ttgggtgact attttggcgc
     1021 ggctggcaac aaccagtttc tccgtcaatc cttgaaacca aacattttcg acgacgttgc
     1081 cgtcgatatc gatcccgtcc gtcgatccgg cgggacgcgg gtcgattttg gattcgaagt
     1141 gcttgacgtt ttgcacagca tcgcagcgcg gacggatccg cagatgatgc aactccagaa
     1201 aaaccgggcg gctataagtg taaatagttt tgtgactgat ttcgaagaac atggttatcc
     1261 ttccgcccag tcttgccgcg cgattgcctt gccgatcact ggccgactcg atccggcgca
     1321 cccgaaccca ccgggcgaag cgcgaaaaag gtgtcgaaga tgcattgatc caccagattc
     1381 aacttggtct gaaacccatc gaggaattca tgcaggccgc gctcgacgat ctgctgcgtg
     1441 tcggtatacg ccaactcggc gcgcagctgg cccaagcgct gctcggcggt attgcggtac
     1501 atgccgatcg gcgtgccgga gatcgcgtgg agagaatcgt tggcggtcgt caggcagtag
     1561 tgaatcgagc gcggaaactc atggtccaag accagaaagt tgatgattt
//
LOCUS       DATIRS010000409         3402 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_30996, whole genome shotgun sequence.
ACCESSION   DATIRS010000409 DATIRS010000000
VERSION     DATIRS010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3402)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3402)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3402
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30996"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1954)
                     /locus_tag="VLM90_05100"
     CDS             complement(<1..1954)
                     /locus_tag="VLM90_05100"
                     /inference="COORDINATES: protein motif:HMM:NF014071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HSQ12369.1"
                     /translation="MSYAIAVDIGGTFTDLVAFDHETQKVIYSKSPTTYNNLVEGILD
                     CFSKAQLKPAQASIVNHGTTLVINSLIQRKGSKTALVTTQGFRDILEIARGNRPDPFD
                     LHYQRDEPLIPRELRFEIPERMGSKGEVVTPLDVAGLEKLAAAIRKLGVESVAVFFMN
                     SYVNPAHEEAAAEKLKELLPDTYITFSTDLTREWYEYERCSTVAANAYVGPQVSTYIR
                     RLDNDFKQQGFGGSLFMMGSNGGLLSTDRTCRQPIGLVESGPIGGCIGAGAYANQLGF
                     KNVVAFDMGGTTAKCALVENGRFSVNSLYYANGYVKGFPIKSAVIDIVEVGSGGGSIA
                     WLDSQKRLHVGPHSAGSTPGPVCYGRGGLEPTITDANLVLGRLNATNFLGGEMALDVN
                     AAQSAITECIATPLGYAGESGMVQMADGIISIATVIMAGAIRKVSVEHGLDPRDFILF
                     SYGGGGPLHSSALAHELSIPTVVIPPEPGNFSAIGMLLADARIDTSKTFVGILSEKTM
                     PSMTELFASMETEAAAALAVEFGTSEVFFERHAEMRYRGQRHNIKVPVSGLKDAEEIR
                     AAFERDYKRRYGHADAKAPAEFQALHLSAFARLQQPNIARLPRAAAQAPAQQIRKIYI
                     GNAGGWLDAPIYHRDGLAPGFSASGPS"
     gene            complement(2067..>3402)
                     /locus_tag="VLM90_05105"
     CDS             complement(2067..>3402)
                     /locus_tag="VLM90_05105"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HSQ12370.1"
                     /translation="NCHWIDIGGSAIGSVSYSSTDIFMEGLQLRSIKLWSKGEPIEEV
                     YRIIENNTRFPLELLGDIEAQLGGCFLGRDLTQDMANKYSPAVFLGTLDAILDQCEAA
                     TREKIRAIPDGVYQHEAFLDNDGVRDEKIPIRVKVIVAGDEITIDYSEMSPQVRGCVN
                     SGFFGGGRTCARVGFKYLIATDEPANEGTFRPLKMILPEGTLISAEATAAMGLYSIPF
                     PTVIDCFIKALEPALPQRVTGAHFGTFSSLSFGGRRVDTGAYFKANDSGHGGWGACAT
                     HDGAGPFRTMAHGDTRLIPIELQESMYPFRVEEFRLRQDSGGAGQWRGGLGFDKQYVL
                     LAPCELWANFDRIGCPPWGVQNAKAGKTGQVLVLKNGQQEPELLYKTENCPVAAGDRV
                     RMSTGGGGGYGDPRKRSTELVAKDVIRGFVSIESARDDYGVVFDTDGKARRE"
BASE COUNT          682 a          988 c         1028 g          704 t
ORIGIN      
        1 ccgacggtcc gctggcgctg aagcctggcg ccaagccatc ccgatgataa atcggcgcgt
       61 cgagccagcc gccggcattg ccgatgtaga tcttccgaat ctgttgggcc ggtgcttgcg
      121 ccgcggcgcg cggcaagcgc gcgatgttgg gttgctgcaa gcgcgcgaag gccgagagat
      181 gcaatgcttg gaactccgcc ggtgccttgg cgtcggcgtg gccgtagcgc cgtttgtagt
      241 cccgctcaaa ggcggcgcgg atttcctccg catctttcaa tcccgacacc ggcactttga
      301 tgttatggcg ttggccgcgg taacgcatct cggcgtggcg ctcgaaaaac acttcgctgg
      361 tgccgaactc gacggcgagc gccgcggccg cttcggtttc catcgaagcg aacagctcgg
      421 tcatcgacgg catggttttc tcgctgagga tgccgacaaa ggttttcgac gtatcgatgc
      481 gcgcatcggc cagcagcatg ccgatggcgg aaaagttccc cggctcgggt ggaatgacca
      541 ccgtgggaat cgacaactcg tgggcgagcg cggaagaatg gagcggtccg ccgccgccgt
      601 agctgaacag aataaaatcg cgcggatcga gaccatgctc taccgacact ttgcgaatcg
      661 cgccggccat gatcaccgtc gcgatggaaa ttatcccgtc ggccatctgc accatgccgc
      721 tttcacccgc gtagccgagg ggtgtggcga tgcactcggt tatcgcgctt tgcgccgcgt
      781 tcacgtcgag ggccatctcg ccgccgagaa agttcgtcgc attgagacgg ccgagcacga
      841 gattggcatc ggtgatcgtc ggctctaaac cgccgcggcc gtagcatacc ggtcccggtg
      901 tcgagccggc gctatggggt ccgacgtgca aacgcttctg cgagtcgagc caggcgatgg
      961 aaccgccgcc cgagcccact tcgacgatgt cgatgaccgc cgatttaatt ggaaagcctt
     1021 tgacatagcc gttggcgtag tagagggaat tcaccgaaaa gcggccattt tcaaccagcg
     1081 cgcatttcgc cgtagtgccg cccatgtcga aggcgacgac gtttttaaag ccgagttggt
     1141 tcgcgtaggc gccggcgccg atgcagccgc cgatggggcc ggattcgact aggccgatgg
     1201 gctggcggca agtgcgatcg gtggagagca atccgccgtt ggagcccatc atgaaaagag
     1261 aaccgccaaa gccttgttgt ttgaagtcgt tgtccaggcg gcgaatatag gtgctcacct
     1321 gtggcccgac gtaggcgttg gcggcgaccg tcgagcagcg ctcgtactcg taccactcgc
     1381 gggtcagatc ggtgctgaaa gttatgtaag tgtcgggtag cagctctttc aatttttcag
     1441 ccgccgcttc ctcgtgggcc gggttgacat acgagttcat gaaaaaaacc gccaccgact
     1501 cgacgccgag tttacggatc gcggcggcga gtttttccaa acccgcaaca tcgagcggcg
     1561 ttaccacttc gcccttgctg cccatgcgtt cgggtatttc aaaacgcagc tcgcgtggaa
     1621 tcagcggctc atcgcgctga tagtgcagat cgaacgggtc gggacggtta ccacgggcga
     1681 tttcgagaat atcgcggaag ccctgggtgg taaccaatgc ggtcttcgaa cctttgcgct
     1741 ggatcaagga attgatcacc agcgtcgtgc catggttgac gattgaagct tgcgccggtt
     1801 tgagttgcgc tttgctaaaa caatcgagaa tcccctcgac cagattgtta taggtcgtcg
     1861 gactcttgga atagatcacc ttctgggtct cgtgatcgaa cgcgaccaga tcggtaaacg
     1921 tgccgccaat atcgacggcg atggcataac tcatttttaa agataactcc cgttcaaaag
     1981 ttcaaaggtt caagcgttca atggataaag agttcgcgct tcggattgtt ccgacgttga
     2041 acttttgaac ccttgaacct tgaacgtcat tcgcggcgcg ctttaccatc ggtatcgaag
     2101 acgacaccgt aatcgtcacg cgcgctttca atcgaaacaa agccgcgaat gacatcctta
     2161 gcgaccagtt cggttgaccg cttgcgcgga tcgccgtaac cgccgccgcc gccggtggac
     2221 atgcgcacgc ggtcgccggc ggccaccggg cagttttcgg ttttgtaaag cagctccggt
     2281 tcttgctggc cattttttag caccagcact tgcccggttt tcccggcctt ggcgttttgc
     2341 actccccagg gcgggcagcc gatgcggtcg aagttggccc atagttcaca gggggcgagc
     2401 aaaacatatt gtttgtcgaa gcccagaccg ccgcgccatt ggccggcgcc gccggaatcc
     2461 tggcgcaagc gaaattcctc gacgcgaaat ggatacatcg actcttgcag ctcgatggga
     2521 atcagccggg tgtcgccatg ggccatggtg cgaaacggcc cggcaccgtc gtgggtcgcg
     2581 caagcgcccc agccgccatg gccgctgtcg ttggctttga aatacgctcc ggtgtcgacc
     2641 cgcctgccgc cgaagctgag ggaagagaag gtgccgaaat gcgcgccggt aacgcgctgc
     2701 ggtaaagccg gttccaaggc tttgatgaaa caatcgatca ccgtagggaa tggaatgctg
     2761 tagagtccca tcgccgcggt ggcttcggcg ctgattagcg taccttcggg gaggatcatt
     2821 tttaacggcc gaaacgtgcc ttcgttggcc ggctcatcgg tggcgatgag atatttgaac
     2881 cccacccgcg cgcaggtacg cccaccgccg aaaaatcccg aattcacgca gccgcgcacc
     2941 tgcggcgaca tctcggaata atcgatggta atctcgtcgc cggcgacgat gactttgacg
     3001 cgaatgggaa ttttctcgtc gcgcacgccg tcgttgtcga gaaacgcttc atgttggtag
     3061 acgccgtcgg ggatggcgcg gatcttttcc cgcgtcgccg cctcgcattg gtcgagaatc
     3121 gcgtcgaggg tgccgagaaa aaccgctggg ctgtacttat tcgccatatc ttgggtcaaa
     3181 tcccggccca agaagcagcc gcccagctgc gcttcgatgt cgcccaacag ttccaacggg
     3241 aaacgggtgt tgttctcgat gatacggtaa acttcttcaa tcggctcgcc cttggaccag
     3301 agtttaatcg agcgcagctg caacccttcc atgaaaatat cggtggaaga ataagacacc
     3361 gagccgatcg ccgagccgcc aatgtcgatc caatggcagt tg
//
LOCUS       DATIRS010000410         1713 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1015059, whole genome shotgun sequence.
ACCESSION   DATIRS010000410 DATIRS010000000
VERSION     DATIRS010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1713
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1015059"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(134..814)
                     /locus_tag="VLM90_05110"
     CDS             complement(134..814)
                     /locus_tag="VLM90_05110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12371.1"
                     /translation="MSRWSDVERQLNVMVNQWYDTAEIKRMLAVPLNPARLAFRHQHM
                     NFFSNNRRDCWAAVACKAPLDVKRAIWEHEKDELIYDPRMGKAHVTEDDLGDYKESDM
                     IPGARAAFYAWLHCAQEKPWLEGLACSHILERRNNDHIVTGGTLTQRLVKRQEVELGI
                     KKKDQDINVQVHLVADVDHTDLLAEVFNRYVVDDLTAQQMLRGAEESLAIERSFHGAI
                     AAAMAEMD"
     gene            complement(1000..1245)
                     /locus_tag="VLM90_05115"
     CDS             complement(1000..1245)
                     /locus_tag="VLM90_05115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12372.1"
                     /translation="MTQSNEEKSRYKIADTHRSQPFVGVMKRDRDTYSWSWKGHIAFV
                     DGHYFEFTSQRTFDTSTEAEAYMRRFACNHIDRRMNL"
     gene            complement(1324..>1713)
                     /locus_tag="VLM90_05120"
     CDS             complement(1324..>1713)
                     /locus_tag="VLM90_05120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12373.1"
                     /translation="DITATDYHPLAEEFLRFNSDLNDLPPIKFHNAPWAGPNPDLGRF
                     DLIVGSDLLYERGHPALLSAFLACHTESAAQVILADPGRKRCGQFSSQMNAAGYSRTE
                     QRFHCSGEASIHPHGRMMSFARAQRKL"
BASE COUNT          323 a          454 c          541 g          395 t
ORIGIN      
        1 catgggagtc ggcgctaatc aggccgtggc gaatttccat ggcgattctc cggtattcct
       61 tttgattcca gcccccgcaa gaaaatcttc gatgtgattc cttagccgca aactggaacc
      121 tgccgactga atttcaatcc atttccgcca tcgccgcggc gatggcgccg tgaaagctgc
      181 gttcgatggc gagggactct tcagcgccgc gcagcatttg ctgcgcggta agatcgtcga
      241 cgacgtaacg attgaaaact tcggcgagca gatcggtatg atcgacgtcg gcgaccagat
      301 gcacttggac gttgatgtcc tggtctttct ttttgatgcc caactcgact tcctggcgtt
      361 tgaccaggcg ttgagtgagc gtgccgccgg tgacgatgtg gtcgttgttg cgccgttcca
      421 agatatgcga gcaggccagc ccttcgagcc agggtttttc ttgcgcacag tgaagccagg
      481 cataaaatgc cgcgcgcgcg ccggggatca tgtccgactc tttatagtcg cccaggtcat
      541 cctcggtgac atgggccttg cccatgcgcg ggtcatagat gagctcgtct ttttcatgct
      601 cccagatggc gcgcttgacg tcgaggggcg ccttgcaggc caccgccgcc caacagtcgc
      661 gccggttgtt gctgaagaaa ttcatgtgct ggtggcgaaa agcgagcctg gcgggattga
      721 ggggcacggc gagcatgcgc ttgatctcgg ctgtgtcgta ccactggttg accatgacat
      781 ttaattgccg ttcgacgtcg gaccatctgc tcatcggatt ttccttcaaa acgagattgc
      841 cgcgcgcgct ggcctcgcgg atctgacgcg aatatatgtc ggcggcgaaa cggctgtcaa
      901 tcaaaccggg ctagtgccgg cggggaaaac cgatgggctg gaaacttcgg cgggtatttt
      961 cagtagcgat gacttactga ccgacggcgt gggtgcacgc tagaggttca tgcgacggtc
     1021 gatgtggttg caggcgaacc ggcgcatgta agcttcggct tcggtagagg tgtcaaaggt
     1081 gcgttggctg gtgaattcga aatagtgccc gtcgacaaag gcgatatgtc ccttccagct
     1141 ccaggagtag gtatcgcgat cccgcttcat gaccccgacg aatggctgac tgcgatgcgt
     1201 atcggcgatc ttatagcggg atttttcctc attgctctgt gtcatgccga tcagtctagt
     1261 gcttgctaga ggcgatagca atcatccgct ggcgcggcgc atggcttcaa gcgcgcggca
     1321 acttcaaagt tttctttggg cgcgcgcaaa gctcatcatg cggccgtggg ggtgaatgct
     1381 cgcttcaccg ctgcaatgaa atcgctgctc ggttcggctg tagcctgccg cgttcatttg
     1441 gctgctgaac tggccgcatc gcttgcggcc gggatcggcg aggatgactt gggcggccga
     1501 ctcggtatgg caggcgagaa atgccgacaa tagggcggga tgaccgcgtt cgtagagcag
     1561 atcgctaccg acgatgaggt cgaagcggcc gagatcggga ttcgggccgg cccatggggc
     1621 gttgtgaaat ttgatcggcg gcagatcatt caggtcgctg ttgaagcgga gaaattcctc
     1681 cgccagggga tgataatccg ttgccgtgat gtc
//
LOCUS       DATIRS010000411         3300 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1506339, whole genome shotgun sequence.
ACCESSION   DATIRS010000411 DATIRS010000000
VERSION     DATIRS010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3300
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1506339"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..926
                     /locus_tag="VLM90_05125"
     CDS             <1..926
                     /locus_tag="VLM90_05125"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSQ12374.1"
                     /translation="IIPLQRWILERRRYTTITGSFRPGLIDLGKWNYIACAILITLLA
                     LLTVGPMVILVLGSFMQRIGYFVLGFTLEHWRFVLTDPVFVKALRTTLTLALTAALLS
                     PLLFSVLAYILVRTKLPGRSALDLMIWSAGAIPGILAGLGLLWMFIGTPGLNALFGTI
                     WALIIVVILQGKTTGVNIMKGVLVQVGADMEEAARVSGAGWIRTYCKIWLPLLMPTLV
                     LLAVMNFVTAAGATSSIILLASRDTMTLSLMALELSANAVSNREAASIISIFIIAFTV
                     TGALLVRYFGRRFGVRHDMHAGPSGTTPAAV"
     gene            1068..2153
                     /locus_tag="VLM90_05130"
     CDS             1068..2153
                     /locus_tag="VLM90_05130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12375.1"
                     /translation="MANMVTSPPRSLRFLFIALAGLSLLLGIWIGVARLGFALPLPSP
                     LLISLHGPLMAIGFLLTLIGLERAASLDRWWVYGVPLLSILSIFSLLTDLPSVSTAVL
                     AAGSALLLTLYFVELYNRQPEEHFIIMAVSAAVLACGNLLWLTETTLHRIVPWWAGFL
                     ILMIAGERLELTRLRSPKSWVRNSFRLAVIILIAGLVTSPWDFRLGVRIAGAGMIALA
                     LWLLRYDLAWQSIRQSGLSRFMAAGLIAGYFWLAVGGVFWIWFARFFGAGPLYDAMLH
                     TVLLGFVFSMIFAHGPIILPAITQLALPFHYRFYLHAGLLHLSLLVRIAGDLALLPGG
                     QQWGAVLGALAILIFLLNTVHALVSAR"
     gene            2170..2685
                     /locus_tag="VLM90_05135"
     CDS             2170..2685
                     /locus_tag="VLM90_05135"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HSQ12376.1"
                     /translation="MDLLHCVTGADDPDRETNRVMGKLMTYYYRALPILLGLIFAAAS
                     SAAADIGQIKNVSGAVFILRQNVQQPAKAGDLVQQSDVLITGANGAVGLTFIDSSRLS
                     AGPNSRIELKQFRFNPTTHDGEFVTDVQRGTLAVVSGQIANRSPDAMKVKTPTTILGV
                     RGTTFAVQVEE"
     gene            2708..>3300
                     /locus_tag="VLM90_05140"
     CDS             2708..>3300
                     /locus_tag="VLM90_05140"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HSQ12377.1"
                     /translation="MLDWRLRHAFCACAACAVLAGCATVKPAPKINTYVVLLPEEGGA
                     HTSVIVGEGAHALTLDQPLSGATVDSEGKIERKSPTAAEADKTFAAALAAQPPKPISF
                     TLYFDTNRTQVTTASRPQLAALMAEAARRQAVEVQVTGHTDRVGSDADNDRLSLQRAE
                     SVRAMLVQNGIKAMFIRAVGRGEREPLVPSADEQPEAR"
BASE COUNT          566 a         1089 c          908 g          737 t
ORIGIN      
        1 tgatcattcc gctgcagcgc tggatcctgg agcggcgccg ctacacgacg attaccggca
       61 gctttcgccc cggcctgatc gatcttggca agtggaacta catcgcctgc gccatcctga
      121 tcacgctcct ggcgctgctg accgtcggtc ctatggtgat acttgttctc ggcagtttta
      181 tgcagcgcat cggctacttc gttttgggct tcactctcga acactggcgt tttgtgctca
      241 ccgacccggt tttcgtcaaa gcgctgcgca cgacgttgac gctggcgctc accgcagcgc
      301 tgctgagccc gctgcttttt tccgtgctcg catacatcct cgtgcgcacg aaattgccgg
      361 gacgttcggc cctcgatttg atgatctgga gcgccggcgc catccccggc attctcgccg
      421 gcttggggct cttgtggatg tttatcggca cgccggggtt gaacgcgctc ttcggcacca
      481 tctgggcgct catcatcgtc gtcatcctgc aaggcaaaac caccggcgtg aatatcatga
      541 aaggcgtgct cgtgcaggtc ggcgccgaca tggaagaagc cgcgcgagtc tccggcgccg
      601 gctggatcag aacctattgc aaaatatggc tgccgctctt gatgccgact ttggtcctgt
      661 tggcggtgat gaacttcgtc accgccgccg gcgccaccag cagtattatt ttactcgctt
      721 cgcgcgacac catgacgctc tcgttaatgg ccctggagct ctccgccaac gccgtaagca
      781 accgcgaagc cgccagcatc atcagcatct tcatcatcgc tttcaccgtc accggcgcac
      841 tgctggtgcg ctacttcggc cgccgcttcg gcgtccgcca cgatatgcac gccggcccca
      901 gcggcaccac accggccgcg gtgtgaatcg gcattcccgc aaaaggtaaa tacgagactc
      961 atcacgaaga gcacgaaggt agaagaagaa attgtttacg aaccctgcgt gatcttcgtg
     1021 tccttcgtgt gaaatagttt cttgaccttt ctcggaacaa gcggcaaatg gcaaacatgg
     1081 tcacttcgcc gccgcgctcc cttcgcttcc tcttcattgc cctcgccggc ctctcgctgc
     1141 ttctcggcat ctggatcggc gtggcccggc ttggctttgc tctgccactc ccgagtccgc
     1201 tcttgatctc actgcacggc ccgctgatgg ccatcggctt tctgcttacg ttgatcggcc
     1261 tggaacgcgc cgcctcgctg gaccgctggt gggtttacgg tgtgccgctg ctgagcatct
     1321 tgagcatatt ctcattgctc accgacttgc ccagcgtcag cacagcggtc cttgccgcgg
     1381 gctcggccct gctgctcact ttgtatttcg tcgagcttta taatcgccag cctgaagagc
     1441 atttcattat catggcggtg agcgccgccg tgcttgcctg cggcaatctg ctctggctca
     1501 ccgaaacgac cctgcatcgc atcgttcctt ggtgggccgg attcttaatt ctaatgatcg
     1561 ccggcgaacg gctcgaactg acgcgcctgc gcagcccaaa gtcatgggtc cgcaattcgt
     1621 ttcgtctcgc cgtaatcatc ttaattgccg gcctggtgac atcgccatgg gattttcgcc
     1681 tcggagtgcg catcgccggc gccggcatga tcgccctcgc gctttggctg ctgcgctacg
     1741 atctcgcctg gcagagcatt agacaatccg gcttatcgcg cttcatggcc gctggactca
     1801 tcgccggtta tttttggctc gccgtcggcg gcgttttctg gatttggttc gcgcgcttct
     1861 tcggcgccgg accgctctac gacgccatgc tccatacggt gttgctcgga tttgtcttct
     1921 cgatgatttt cgcccatggg ccaattatat tgccggcgat cacccaactg gctttgccgt
     1981 ttcactatcg gttttatctt catgccggct tgctgcatct ctcactgcta gtccgcatcg
     2041 ccggcgatct cgcgttgttg ccggggggac agcaatgggg tgccgtgctc ggcgccctcg
     2101 ccattttgat ctttctcttg aacactgttc acgccttggt ttcggcgcgc tgaggttgct
     2161 ggcgcaagct tggatttgct acactgcgtt accggtgcag acgaccccga ccgcgaaacc
     2221 aaccgagtga tgggaaaact aatgacttat tactaccgcg ctttacctat tttgctggga
     2281 ttgatcttcg ctgcggcgtc atctgccgcc gccgacatcg gccagatcaa gaatgtcagc
     2341 ggcgcagttt tcattctccg ccaaaacgtc caacagccgg ccaaggcggg cgacctcgtg
     2401 caacagtccg atgtactcat caccggcgcc aacggcgccg tcggcctgac cttcatcgac
     2461 agctcgcgtt tatccgccgg ccccaatagc cgcatcgagc tcaaacagtt ccgcttcaat
     2521 ccgaccaccc atgacggcga gtttgtcacc gacgtgcagc gcgggacgtt agcggtggtc
     2581 tccgggcaga tcgccaatcg ctcccccgac gccatgaaag taaaaacccc gaccaccatc
     2641 ctcggcgtgc gcggcaccac cttcgcagtc caagttgaag aataaaaatt tccccccgag
     2701 tttcctattg ctcgattggc gcctgcgtca cgctttctgc gcgtgtgcag cgtgcgccgt
     2761 actcgccggc tgcgcgacgg tcaagcccgc gcccaagatc aacacctatg tcgtgctgct
     2821 gccggaagag ggcggtgcgc acacgtcggt tattgtcggc gagggtgcgc atgcgctgac
     2881 tttggatcaa ccgttgagcg gcgcaactgt cgacagcgag ggaaagattg aacgaaaatc
     2941 tcccactgcc gcggaggccg acaaaacctt cgccgcggcg ctggcggctc agccacccaa
     3001 accgatcagc ttcacccttt acttcgatac caaccgtacc caggtcacta cggcgtcgcg
     3061 gccgcaactc gccgcgctga tggcggaagc ggcgcgccgc caagccgtcg aagtccaagt
     3121 caccggccac accgaccgcg tcggcagcga cgccgacaac gaccggctct cgctacagcg
     3181 cgccgaatcc gtgcgcgcga tgctggtcca gaacggcatc aaagcgatgt tcatccgcgc
     3241 cgtcggccgc ggcgaacggg agccgctggt gcccagcgcc gacgagcaac ccgaagcccg
//
LOCUS       DATIRS010000412         1566 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1604701, whole genome shotgun sequence.
ACCESSION   DATIRS010000412 DATIRS010000000
VERSION     DATIRS010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1566
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1604701"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1203)
                     /locus_tag="VLM90_05145"
     CDS             complement(<1..1203)
                     /locus_tag="VLM90_05145"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12378.1"
                     /translation="MADSEEINKRAEAAPTRPWASLAIRDFRLMWIASVCNAVAIQVR
                     NVAGLYQVYEISGSAFQLGLTGFFQAFPFVIFGLFAGAVADAFDRKKLLVVTVAIQLI
                     PSLLLGFLTMTGTIQVWHIFTLGFVGALVEVFNWPARSALIPRLVPTSYMMNAVTLNT
                     IIIQTSFLLGPALGGMLIDHSGLVFTYFLTIAMFIPSGIAIFAMRTSGVPEGERRRVN
                     LKSIFEGIEFIWVQRIILSLFLLDFGVTLVGFYKPILPIFAADVFKTGASGLGILYGA
                     PSLGAIVGSVVLLMIGNVNRMGVLVVCAALIFAGSLTLLGLSDSFWLAVGATLILGFT
                     DSVSVAIRRTVVQMLAPDGMLGRASSLITAFAQATNGLGAVLAGVAAQQVGAPNALLL
                     GSALCFIMI"
     gene            complement(1328..>1566)
                     /locus_tag="VLM90_05150"
     CDS             complement(1328..>1566)
                     /locus_tag="VLM90_05150"
                     /inference="COORDINATES: protein motif:HMM:NF039404.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF6295 family protein"
                     /protein_id="HSQ12379.1"
                     /translation="QEWIELKEANVSYDHPYGMPLEHALNIDFVDESKGPGARVAVEL
                     SVDAARQLVKTIEAVLAQAEHQGVLEDKHQAAVG"
BASE COUNT          371 a          436 c          490 g          269 t
ORIGIN      
        1 gatcatgatg aagcagagcg cgctgccgag cagcagcgcg ttgggcgcgc cgacttgctg
       61 ggcggcgacg ccggcgagga cggcgcctag tccattagtc gcctgggcga aggcggtgat
      121 caaactcgag gcgcggccca acatgccgtc tggggcgagc atctgcacga cggtgcggcg
      181 gatggcgacg ctcaccgagt cggtgaaacc caagatcaag gtcgcgccca ccgccagcca
      241 aaaggaatcg gacagcccta gcagagtcag gctgccggca aagatcagcg cggcgcatac
      301 gaccaagaca cccattcgat ttacgttacc gatcatcaat aggaccaccg agccgacgat
      361 ggcgccgagg gacggcgcgc cgtagaggat gcccaacccc gatgccccgg ttttgaaaac
      421 atcggcggcg aagatcggca ggatcggttt ataaaatccc accaaggtga cgccgaagtc
      481 gagcaggaac agcgacagga tgattcgctg cacccagata aactcgatgc cttcgaagat
      541 gcttttcaga ttgacccggc gtcgttcgcc ttcgggaacg ccggacgttc gcatggcaaa
      601 gatcgcgatg ccggagggga tgaacatggc gatggtgaga aaataggtga agaccaagcc
      661 gctgtgatcg atgagcatgc cgcccagcgc cgggcctagg agaaagctgg tttggatgat
      721 gatcgtgttg agcgtcaccg cgttcatcat gtaggacgtc ggcaccaggc gcgggatcaa
      781 cgccgaacgc gccggccagt tgaacacttc gaccagcgcg ccgacgaatc ccagagtgaa
      841 gatatgccag acctggatcg tcccggtcat ggttaagaag ccgagcagaa gactcgggat
      901 cagttggatc gccacggtga cgacgaggag tttcttacgg tcgaaggcgt cggccaccgc
      961 gccggcgaac aaaccgaaga tcacgaaggg aaaggcttgg aaaaagccgg tgagacccaa
     1021 ctgaaatgcc gacccggaaa tttcgtagac ctgatagagc ccggcgacgt tgcgcacctg
     1081 gatcgccacc gcgttacaaa cgctggcgat ccacatgagg cgaaaatcgc ggattgccag
     1141 tgacgcccaa ggacgcgtcg gcgcggcctc ggcgcgctta tttatttctt ctgaatcagc
     1201 caatgggacg agatcgatga atttgaaaaa ctaccgacag ctatagcgcg agtagaaaag
     1261 gaatgcgaag ggtgttcgag gcggcgaagc ggtttatcag cttcgccgct acgactcgat
     1321 tgtcaaacta accgacggcg gcttggtgct tgtcttccaa gacgccttga tgctcggctt
     1381 gagcgagcac ggcttcgatg gtttttacca actggcgcgc cgcgtcaacg ctcagttcga
     1441 ccgccacacg ggcgccgggt cctttagact catcgacgaa atcgatgttc agggcatgtt
     1501 cgagcggcat gccataggga tgatcgtagg agacattggc ttctttgagc tcaatccact
     1561 cctggc
//
LOCUS       DATIRS010000413         4209 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1801592, whole genome shotgun sequence.
ACCESSION   DATIRS010000413 DATIRS010000000
VERSION     DATIRS010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4209
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1801592"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..465)
                     /locus_tag="VLM90_05155"
     CDS             complement(<1..465)
                     /locus_tag="VLM90_05155"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: protein motif:HMM:NF011456.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HSQ12380.1"
                     /translation="MKKEKYNVAIVGATGAVGEQMREVLDERQFPVGELRLLASERSV
                     GQFLPFQSRQLPVQVLKADSFTDIDIGLFSAGGSVSTEFAPLAVAAGAVVIDNTSVFR
                     LEPDIPLVVPEVNSKEIANYKTRGIVANPNCSTIQMVVALKPIHDTARIKRVV"
     gene            complement(472..1566)
                     /gene="leuB"
                     /locus_tag="VLM90_05160"
     CDS             complement(472..1566)
                     /gene="leuB"
                     /locus_tag="VLM90_05160"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: protein motif:HMM:NF012407.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003862 - 3-isopropylmalate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HSQ12381.1"
                     /translation="MNYNIAVFPGDGIGPEVMGEGTQVLKQVAQLYGFTVSLEPGIVG
                     GASIDAHGKPLTDAVLNLAKQSDAVLLGAMGGPKWDGLDYAIRPERALLALRLELGLF
                     ANLRPVKLFAALASASTLKREVVEGTDMLVVRELTGGIYFGQPKGVTMLPDGTERGVN
                     TEVYTTPEIERIAHVAFQAALKRRKKVTSVDKANVLEVTELWRKVVTRVHKNQEGYAG
                     IELEHILVDNCAMQLIRNPRQFDVVVTTNMFGDILSDEAAMLTGSIGMLPSASLGGKV
                     GMYEPVHGSAPDIMGQDKANPLATILSVAMMLRHSLDQGAAADRIEKAVEVVLDEGYR
                     TADIQEAGCKLLGCKQMGQLVRDQIAAAKG"
     gene            complement(1563..3128)
                     /locus_tag="VLM90_05165"
     CDS             complement(1563..3128)
                     /locus_tag="VLM90_05165"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: protein motif:HMM:NF002086.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HSQ12382.1"
                     /translation="MDQMANDNVVQIFDTTLRDGEQSPGASMTVEQKVVIARQLEKLG
                     VDVIEAGFAASSDGDFESVRRVAKEVSQPRVVSLARAQEGDISRALKAVEGAKKPGIH
                     TFIATSDIHLKHKLRMSREQVVEAAVKAVSYAKQYTDYVEFSAEDASRSDPEFLLQIF
                     REVIRAGAKTLNVPDTTGYAIPSEFGALIANLIERTAGGDRVIWSAHCHNDLGLAVAN
                     SLAAVHNGARQIECTINGIGERAGNTSLEEVVMALRTRKNFLNLDTNIHSEQLFPSSR
                     LLSQVTGIAIPINKPIVGDNAFAHEAGIHQDGVLKHKQTYEIMTPESIGIPGNKLVMG
                     KHSGRHAFYERLKHLGFNLSKEDMNRAFVRFKELADKKKNVYDEDIEAVVAEEVLRMP
                     GRPDKFELLYMNVNSSTDGVPTATVKMRVADAEKMDHASGDGVVDACYKVITKITDSQ
                     SQLVRYSVNALTGGTDAQGEVACLIEDGGIRVSGQGSHTDIIMASALAYINALNKLEE
                     RKRYRQVVEKEGP"
     gene            complement(3230..4090)
                     /gene="pssA"
                     /locus_tag="VLM90_05170"
     CDS             complement(3230..4090)
                     /gene="pssA"
                     /locus_tag="VLM90_05170"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR00473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003882 - CDP-diacylglycerol-serine
                     O-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HSQ12383.1"
                     /translation="MSAMNAPEPEQPQEKDKLRLLRRRRERPRITLRQRMPAEKLRKG
                     VYLIPSLFTAGNLMCGFFSIIATFRGEYVNAALLILLANVFDGVDGYVARLTRTTSQF
                     GVEFDSLADVVAFGVAPAVLVYIWALVPWQIWGWLAAATYVVCGAARLSRFNVQAQGP
                     AKNHFVGLPIPAAAQMISSAVLLYYYIGFEGTPTRHLTFLLVIYGLAILMVSSIPFFS
                     LKNNDMRKRHPEWMFLSGVILITLIIAAWHIMFFTIVLLYTLSGPLLWCLTKLKQRRE
                     SSRGGTQALP"
BASE COUNT          897 a         1328 c         1122 g          862 t
ORIGIN      
        1 caccacgcgt ttgatccgcg ctgtgtcatg aatcggcttg agtgcgacga ccatttgaat
       61 cgtcgaacaa ttgggattgg cgacgatgcc gcgggttttg tagttagcga tctccttgga
      121 attgacctct ggaaccacca aaggaatatc cggctccaag cgaaacaccg aagtgttgtc
      181 gatcaccacc gcgcccgccg ccaccgccag cggcgcgaac tccgtgctga cgctgccgcc
      241 ggcggagaac aagccgatgt cgatgtctgt aaacgaatcg gccttcaaca cctggacggg
      301 caactgccgg ctttgaaacg gcaggaactg gccaaccgat cgctccgagg ctaacaaccg
      361 caactcgccc accgggaatt ggcgctcatc gagcacttcg cgcatctgct cgccgacggc
      421 gccggtggcg ccaacgatcg cgacgttgta cttttccttc ttcacaaaaa cctatccctt
      481 cgctgccgcg atctggtcgc gcaccaactg gcccatctgc ttgcagccca acagcttaca
      541 accggcctct tgaatatccg ccgtgcgata accttcgtcg aggaccactt cgacggcctt
      601 ctcgatgcgg tccgccgccg caccctgatc gagggaatgg cgaagcatca tggcgacgct
      661 gagaatcgtt gccaaaggat tcgccttgtc ctggcccatg atatcgggcg cgctaccatg
      721 caccggctcg tacataccga ccttgccgcc gagactcgcc gacggcagca tgccgatgga
      781 gccggtcagc atcgccgctt catcgctcaa gatatcgcca aacatattgg tcgtgacgac
      841 gacatcgaat tgccgggggt tacggatcaa ttgcatggcg cagttatcga ccagaatatg
      901 ttccaactcg atgccggcat agccttcttg gttcttgtga acgcgcgtca ccaccttgcg
      961 ccacagctcg gtgacttcga gcacattggc cttgtcgacg gaggtcactt tcttgcgccg
     1021 cttgagcgcc gcctgaaatg ccacatgggc gatgcgttcg atctctggtg tggtataaac
     1081 ctcggtattg acgccgcgct cggtgccatc gggaagcatc gtcacgccct tgggttggcc
     1141 aaaataaatc ccgccggtga gctcgcgcac caccagcata tcggtgccct cgaccacctc
     1201 ccgcttgagc gtcgacgccg aggcgagcgc ggcaaacagt tttaccggac gtaaattggc
     1261 gaataggccc aactctaacc gcaacgctag gagggcgcgc tcgggccgga tcgcatagtc
     1321 gagaccatcc cacttagggc cgcccatggc gccgagcaaa accgcgtcgc tctgcttagc
     1381 gagattcaat accgcatccg taagcggctt gccatgggcg tcgatggatg cgccgccgac
     1441 gatgccgggc tccagtgaaa cggtgaaacc gtaaagctgc gctacctgct tgagcacctg
     1501 cgtgccttcg cccatcactt cagggccgat gccgtctccg ggaaaaaccg cgatgttgta
     1561 gttcatggtc cctctttttc caccacctgc cgatagcgtt tccgttcttc caacttattg
     1621 agcgcgttga tatacgccag cgcgctcgcc atgatgatgt ccgtatgcga tccttggccc
     1681 gacacgcgga tgccgccatc ttcaatcaag caggcgactt ccccctgggc atcggtgccg
     1741 ccggtgagcg cgttgaccga gtagcgcacc agctgcgact gcgaatcggt gattttggtg
     1801 atcaccttgt aacaggcatc gaccacgccg tcgcccgagg catggtccat cttttccgcg
     1861 tcggcgacgc gcattttaac ggtcgccgtc ggcaccccgt cggtgctcga gttgacgttc
     1921 atgtagagca gctcgaactt atccggccgt cccggcatgc gcaaaacttc ttcggcaacg
     1981 acggcttcga tatcctcgtc gtaaacgttc ttcttcttgt cggccaattc tttgaagcgc
     2041 acgaaggcgc ggttcatatc ttccttgctc aagttaaagc ccagatgctt caaccgctca
     2101 tagaaggcat ggcgcccgga atgcttgccc atgaccagct tattccccgg aatgccgatg
     2161 gactccggcg tcatgatctc gtaggtctgc ttatgcttga gcacgccgtc ttgatgaatg
     2221 ccggcctcat gggcaaaggc attatcaccg acgatcggtt tgttgatcgg gatcgcgatg
     2281 ccggtcacct gcgacagcaa acgcgagctg ggaaaaagct gttcactgtg aatgttggtg
     2341 tcgagattga gaaaattttt gcgcgtgcgc agcgccatga ccacttcttc gagagacgta
     2401 ttgccggcgc gctcgccgat accgttgatc gtgcattcga tctggcgcgc gccgttgtgc
     2461 accgcagcca gcgaattggc caccgccagg cccaaatcgt tatgacagtg ggcgctccag
     2521 atcacccggt cgccgccagc ggtacgctcg atcaagttgg cgatcaaagc gccgaattcg
     2581 gagggaatcg cgtagccagt ggtatccggg acattgagcg tcttagcacc ggcgcggatg
     2641 acctcgcgga agatttgcag caaaaactcc gggtcgctgc gcgaagcgtc ctcggcagag
     2701 aactcgacgt aatcggtata ctgcttggcg taactaaccg ccttgaccgc cgcttcaacg
     2761 acctgttcac gcgacatgcg cagcttatgc ttcagatgta tatccgaagt cgcgatgaaa
     2821 gtatgaatcc ccggcttctt ggcgccctcg acagctttca gggcgcggct aatatcgccc
     2881 tcctgggcgc gcgccaagct caccacccgt ggctggctga cctctttcgc gactcgccgc
     2941 accgactcga agtcgccatc cgacgacgcc gcgaagcccg cttcgatgac atcgacgccg
     3001 agcttctcca actggcgcgc gatcacgacc ttttgctcca ccgtcatgct cgcccccggc
     3061 gattgctcgc cgtcgcgcag cgtcgtatcg aaaatttgta ctacgttatc gttggccatc
     3121 tgatccattt gaatgtctcc tctaccgttg tccgctggcc caccccgaaa tgaaaactcc
     3181 cgcggcaggg ccaacgggag tttgtttcgc ctttactcga gccggaaatt cacggcaacg
     3241 cttgcgtccc cccccggctc gactcccgtc gttgcttaag cttggttaag caccataaca
     3301 agggcccgga taacgtgtac agtaagacta tggtgaaaaa cataatatgc cacgcggcaa
     3361 taatcagtgt aatcaaaatc acgccggaaa gaaacatcca ttccgggtgg cgttttctca
     3421 tgtcgttatt cttcaaactg aagaacggaa tactgctaac catcaaaatc gccaatccat
     3481 aaatcaccaa gagaaacgtc aaatggcgcg tcggcgttcc ctcgaagccg atatagtaat
     3541 acaagagcac cgccgagcta atcatctgcg ccgcagcggg aatcggcaga ccgacgaaat
     3601 ggttcttcgc cggtccttgg gcctggacgt tgaagcgcga cagccgcgcc gcgccacaca
     3661 cgacgtaggt agccgcagcc agccaacccc agatttgcca cggcaccagt gcccatatgt
     3721 agaccaagac cgccggggcg acaccgaaag cgacaacgtc ggccaaggaa tcgaactcga
     3781 cgccaaattg actggtggtc cgggtcaagc gcgcgacata accgtccacg ccatcgaaca
     3841 cgttggcgag cagaatcagc aaagccgcgt tgacatactc accccgaaag gtcgcgatga
     3901 tcgaaaaaaa accgcacatc aaattgcccg cggtaaatag actgggaatc aaataaacgc
     3961 ccttgcgcag tttctccgcc ggcattctct ggcgcaaggt gatgcgcggc cgctcgcgcc
     4021 ggcggcgcag caagcgcaac ttgtcttttt cctgcggctg ctcgggctct ggagcattca
     4081 tcgcgctcat ggcaacctcc cgatgatggt ctccccgcct ataacccttt gcccctccac
     4141 cacttcgata ccacaccctt gaggcaaata aatatcggta cgcgagccga acataatcaa
     4201 accgaagcg
//
LOCUS       DATIRS010000414         2216 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1015443, whole genome shotgun sequence.
ACCESSION   DATIRS010000414 DATIRS010000000
VERSION     DATIRS010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2216)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2216)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2216
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1015443"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..329)
                     /locus_tag="VLM90_05175"
     CDS             complement(<1..329)
                     /locus_tag="VLM90_05175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12384.1"
                     /translation="MQRLEVITRFLLALALSVFLFMSGISLPPIGALLLPFVAQPVLL
                     FGVKYGIGHGLGVVLVALLLLAVFGGTELSLLYGVFAVLAGALLALVGRLRRVEYLVV
                     AAAAAMFA"
     gene            complement(353..646)
                     /gene="rpsR"
                     /locus_tag="VLM90_05180"
     CDS             complement(353..646)
                     /gene="rpsR"
                     /locus_tag="VLM90_05180"
                     /inference="COORDINATES: protein motif:HMM:TIGR00165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HSQ12385.1"
                     /translation="MAQYERSPRPSRERSDEDKGGQRRRPMFRRKVCRFCADKSLRID
                     YKDLRTISSFVSERGKMTPSRITGNCARHQRLLTTAVKRARSIALLPFTTANT"
     gene            complement(806..1252)
                     /gene="rpsF"
                     /locus_tag="VLM90_05185"
     CDS             complement(806..1252)
                     /gene="rpsF"
                     /locus_tag="VLM90_05185"
                     /inference="COORDINATES: protein motif:HMM:NF013419.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HSQ12386.1"
                     /translation="MEGSNTVTLYETLFVVHPEKGPRNKEFIERFNKVVEAQEGTIVQ
                     VEEWGLRDLAYRIEKQAKGFYTLMRYKATGKAVAELERNLKLTDGILRYLTTRAVEDS
                     PMTSPSAPRVYSDEPPRRNYDDRRNYDDRRNYDDNRSRGGDREPSA"
     gene            complement(1288..1872)
                     /gene="pth"
                     /locus_tag="VLM90_05190"
     CDS             complement(1288..1872)
                     /gene="pth"
                     /locus_tag="VLM90_05190"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: protein motif:HMM:NF013368.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HSQ12387.1"
                     /translation="MKIVVGLGNPGSKYDGTRHNIGFLVIDNFARQHNIALDQQRCDA
                     LIGLGISHEEPLLLAKPETFMNRSGVAVAALLHQYEVTAADLVVIYDDLDLPLGRIRI
                     RTKGSAGGHRGVSSIIEHLGGVPFNRIRIGIGRPPEGKVAIDYVLAPFGPAEMADLST
                     AVERSAAALGCLIHQGAAAAMAVYNRALDENDTL"
     gene            complement(1908..>2216)
                     /locus_tag="VLM90_05195"
     CDS             complement(1908..>2216)
                     /locus_tag="VLM90_05195"
                     /inference="COORDINATES: protein motif:HMM:NF026044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12388.1"
                     /translation="AVGIVNGGILQPILREIEVECLPLDIPEFFNVDVTALDIGDSVH
                     IDDLQMPDGVVSVAEDNLALVAVVPPTVEAVATTTAAPVEGAAVAPVDAKAEGKKDNP
                     "
BASE COUNT          501 a          684 c          576 g          455 t
ORIGIN      
        1 gcaaacatcg ccgcggccgc ggcgacaaca agatactcaa ccctgcgcag ccggccgacc
       61 agcgccaaca gcgctcccgc caggacggcg aatacgccgt acagcaagct cagttcggtg
      121 ccgccaaaga ccgccaacag caagagcgcg accagtacca cgccgaggcc atggccaata
      181 ccgtatttaa cgccaaacaa cagcaccggc tgggcgacaa acggcagcag taacgcgccg
      241 atgggcggca aactgatccc gctcatgaac aaaaacacgc tcaaggctag agccaataga
      301 aaccgggtaa tgacttctag ccgctgcatg gatgttggcc agagaaacga atttaggtgt
      361 tggcggtagt aaacggcagc aaggcaatgc tgcgcgcgcg cttgaccgcg gtcgtcagca
      421 gccgctgatg gcgcgcgcaa ttgccggtga tccggctcgg cgtcatcttg ccgcgctcgc
      481 tgacgaagga agaaatcgtc cgcagatcct tataatcgat ccgcaggctt ttatcggcgc
      541 aaaaacgaca aactttgcgc cggaacatcg gccggcgacg ctggccgccc ttgtcttcat
      601 cggaccgctc gcggctaggt ctcgggctcc gttcgtactg tgccataaat tacgctacct
      661 cttatttcgt cttgctcttc ctagccgtgg atctattcgt gcgactggaa gtacaaccat
      721 tttagggaac cgggcgctta tccgcaaatc gagtgatcgg caaatcaaag ccaacctctc
      781 gcgacccgaa ggataccacg ccgatctagg cagaaggttc gcggtcgccc ccacgcgacc
      841 tattatcgtc gtagttccgt ctgtcgtcgt agtttcttct gtcgtcgtag tttcgccgcg
      901 gcggttcatc actatacacc cgtggcgccg acggactggt catcgggcta tcctctaccg
      961 ctcgcgttgt caggtagcgc agaatgccgt cggtgagctt aagattacgc tcgagctcgg
     1021 caaccgcctt gccggtggcc ttgtagcgca tcaaggtata gaaacccttg gcttgtttct
     1081 cgatgcgata ggcgagatcg cgcagtcccc attcttcgac ctgcacgatg gtgccctctt
     1141 gagcttcgac gaccttgttg aatcgttcga taaattcttt atttctcggc cctttttccg
     1201 gatgaacaac aaaaagagtc tcgtataatg ttaccgtgtt actaccctcc acaggaaaat
     1261 tgtctttcta acatacacac ttggcgttta caatgtatcg ttttcgtcaa gcgcgcgatt
     1321 ataaacagcc atggccgccg ccgcgccctg atggatcaga cagccaagcg cggccgcgga
     1381 gcgttcgacg gccgtggaca aatcagccat ttcagcggga ccgaagggcg cgagcacata
     1441 gtcgatggca actttccctt cgggcggacg gccaataccg atgcggatgc ggttaaacgg
     1501 cacgccgcct aaatgctcga taatcgaact gacaccgcga tggccgccgg cgctaccctt
     1561 ggtgcgaatc ctgatccggc ccagcggcaa atccagatca tcgtagatca ccaccaaatc
     1621 cgccgccgtt acttcatact gatggagcag cgccgccacc gctacaccgc tgcggttcat
     1681 gaaagtctcc ggcttggcca ataacaaagg ctcttcgtga cttatcccca gtccaatcag
     1741 agcatcgcat cgctgctgat ccagagcgat attgtgctgc cgcgcgaagt tgtcgataac
     1801 taggaaaccg atattatgcc gcgtgccgtc gtacttgctt cctggattcc ctaggccaac
     1861 gacgattttc acactgccaa tctcgaagaa agcgcaagac cagccgccta ggggttatcc
     1921 tttttgccct cggctttagc gtccaccggc gctacggcag caccttccac gggtgcagcc
     1981 gtcgtcgttg caacggcctc aacagtcggc ggcaccactg cgaccagcgc caggttgtct
     2041 tcggcaaccg acacgacgcc gtcaggcatc tgcaaatcat caatatgaac cgaatcgccg
     2101 atgtccagag cggttacgtc aacgttgaaa aattccggaa tatcgagcgg caaacactcg
     2161 acctcgatct ctcgcaagat cggctgaaga ataccgccgt tgacgatacc taccgc
//
LOCUS       DATIRS010000415         1773 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_327048, whole genome shotgun sequence.
ACCESSION   DATIRS010000415 DATIRS010000000
VERSION     DATIRS010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1773
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_327048"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..556
                     /locus_tag="VLM90_05200"
     CDS             <1..556
                     /locus_tag="VLM90_05200"
                     /inference="COORDINATES: protein motif:HMM:NF024938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HSQ12389.1"
                     /translation="AAEKLGYPCVLKIASVDIPHKTEFGALRLGLDNRTAVEKAYEEM
                     LVNVRMKKPNARIEGVLVQKQIKGVECLLGIARDEQLGPTLVMGLGGVFVEILADVQI
                     SIPPISAAEAKRALESLKGAKVFTGVRGAAAADLDALADMAAKLSWLAHDLRNEIAEF
                     DLNPVVVLPAGQGAFAVDALLVMR"
     gene            650..1189
                     /locus_tag="VLM90_05205"
     CDS             650..1189
                     /locus_tag="VLM90_05205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12390.1"
                     /translation="MDQSRQTRERAVAKSLPAQLAANGLELTTMVEQDESLIRCEATL
                     MSEEILIDANPAPSLVSATHLIYALHALSLLIGITTAASIIGAFVFGIPSIIAVIINY
                     LKRAEARGTFLESHFRWQIRTFWFGLLWCLIGGFLFVTFIGIPLAIVVFVAAGLWVIY
                     RVVRGWLALRDRKPMYTNS"
     gene            1313..1773
                     /locus_tag="VLM90_05210"
                     /pseudo
     CDS             1313..1773
                     /locus_tag="VLM90_05210"
                     /inference="COORDINATES: protein motif:HMM:NF014336.4"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="S1/P1 nuclease"
BASE COUNT          368 a          536 c          499 g          370 t
ORIGIN      
        1 cgccgcggaa aagctcggct atccctgtgt gctgaaaatc gcttcagtcg acatcccgca
       61 taagaccgaa ttcggcgccc tgcgtcttgg cttggacaat cgcaccgcgg tcgagaaggc
      121 ttacgaagaa atgctcgtta acgtgcgcat gaagaagccc aatgcgagaa tcgaaggcgt
      181 attggtgcaa aagcaaatca aaggcgtcga atgcctgctc ggcatcgccc gcgacgaaca
      241 actcggcccg actttggtga tgggcttggg cggcgtcttc gtggaaatcc tcgccgacgt
      301 gcagattagc atcccgccca tcagcgccgc cgaagccaag cgcgcgctgg aaagtttgaa
      361 gggggccaaa gtcttcaccg gcgtgcgcgg cgcagccgcg gcagacctcg acgccctggc
      421 cgacatggcc gccaagctat cttggcttgc ccacgatctc aggaatgaga tcgccgagtt
      481 cgatttgaat ccagtggtgg tgctgccagc cggccaaggc gccttcgccg tcgacgcctt
      541 gctggtgatg cgataaaggc gcgtggacat tggagcgcgg acattggagc gcggacattc
      601 ctgtccgctt ctgttcataa tgcgggttag aaaacccgcg ctcctattgg tggatcaatc
      661 acggcagaca agggagaggg cagttgcgaa gtcacttcca gcgcaactgg cggccaatgg
      721 acttgaatta acgacgatgg tcgagcagga tgaaagtctg attcgctgcg aagcaacgct
      781 catgtccgaa gaaatcctca tcgacgccaa cccggcacct tccctggtta gcgccacaca
      841 cctgatctat gctctgcacg ccctcagtct cctgatcggc attaccactg ctgcgtcgat
      901 catcggcgcc ttcgtctttg gcattccctc gatcatcgcc gtcattatca actacctgaa
      961 gagagcagag gcgcgcggca cctttctcga gtcccacttt cgctggcaga taagaacctt
     1021 ctggtttggc ctgctctggt gtctgatcgg cggcttttta tttgtgacgt tcatcggcat
     1081 tccgcttgcg atagtggttt tcgtcgccgc cggcctgtgg gtcatctacc gcgtcgtgcg
     1141 cggctggctg gcgctgcggg atcgcaaacc gatgtacacc aacagctgac cgcggcgccg
     1201 cgccttgata ccgaagcgaa ttgcaaatcg aagggcggcg gactcaaagc aaaattcaaa
     1261 acctgtcctg agccaagccg aaggatcgaa aatccgatat accggttccg tgatgtcttc
     1321 ttctctcgct ttatttacac ctacgtttct cgcgacgttt ttgctcctca acctgctcgc
     1381 ggttacgccg gctaactcct ggttcgacaa aggccaccga atcgtcggtt tgatcgccca
     1441 ggcacatctc accgtcgccg cgcgcaagga gattgaaagg atactgccag gaggcatgac
     1501 cttggcggac gcagccgttt ggccggacca tgaggggcga cagatacgcg aattcgaccc
     1561 cctccactac gtccgtattc ccgagcttgc cagcggctac gatcaagcgc gcgactgccc
     1621 ggagagaaac tgcatggttt aagctctaaa ctggttttcc gcggccgtcg ccgataaaaa
     1681 tgcgccgatc atgatgagga gactcgccat ccgctacgtc gcccacctgg tgggcgacat
     1741 gcatcagccg cttcatgccg gccgcgccac tga
//
LOCUS       DATIRS010000416         1655 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1899551, whole genome shotgun sequence.
ACCESSION   DATIRS010000416 DATIRS010000000
VERSION     DATIRS010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1655
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1899551"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..448
                     /locus_tag="VLM90_05215"
     CDS             <1..448
                     /locus_tag="VLM90_05215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12391.1"
                     /translation="KSALAQTDAELIANGRYIATAIQGCGCHTRDKADGGKDDAWHYA
                     GAPNPPPPAGPPPNSGWTTPRWKRIYALNITPDRETGIGNWTEAHFIRAMRTGITPDG
                     RVLDPQMPWEAFQKITDRDLKSLWAYLKTIKPIKHQAPAGIPADAK"
     gene            462..998
                     /locus_tag="VLM90_05220"
     CDS             462..998
                     /locus_tag="VLM90_05220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12392.1"
                     /translation="MNAMVVHIFSLAAFSLALAACALNSTQEPIPADWEQASYIERGD
                     YLVNHLGDCIGCHTPRTASNQLDKSLFLSGVPAKYAGVKTGPSGVAGFPGPRGARFYA
                     KNITPDNETGIGTWSEEQFVKTFKTGIRPDGFQYPLTPMEWGIYRNMKEEDVRAMYRY
                     LRTIKPVSNRVPANIPPQ"
     gene            complement(1048..>1655)
                     /locus_tag="VLM90_05225"
     CDS             complement(1048..>1655)
                     /locus_tag="VLM90_05225"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12393.1"
                     /translation="IGVTRIGSNTHYFTVQAFRRAGMNTDKDITFIQTGGEAETVGAL
                     MSGRIDAATLLPPSDGRALALGFRYVVFGPDIGIAYAASTIATRRSLMAKRGPAIGRF
                     MRAMAEASRAMHRDKELVFRVMEKKLRIKDRAVLEASYAIEMKVMEPRLEMKAPALQP
                     MIEEVARTNPRANEVKPQEMMDRRYLAEMESSGFFNQIWAR"
BASE COUNT          369 a          522 c          449 g          315 t
ORIGIN      
        1 gaaatcggcg ctagcgcaaa cggatgcgga actcatcgcc aacggccgct acatcgccac
       61 cgctattcaa ggttgcggct gccatacccg ggataaagcc gacggtggca aagatgatgc
      121 atggcattat gccggggcgc ccaacccgcc gccacccgcc gggccaccgc cgaacagcgg
      181 ctggacgacg ccccgctgga agagaattta cgcgcttaac atcacacccg atcgagaaac
      241 cggcatcggc aattggaccg aggcccattt tatccgcgca atgcgaaccg gcatcacccc
      301 ggatggtcgc gtgctcgacc cgcagatgcc atgggaggcg tttcaaaaaa tcaccgaccg
      361 tgatttaaaa tccctttggg cctacctaaa aaccatcaag ccgatcaagc accaagcgcc
      421 cgccggaatc ccagccgatg cgaaatagcc ggagggtaac catgaacgcc atggttgtgc
      481 atatattttc gttggcggca ttcagtttag cgctcgcagc ctgcgcccta aattcaactc
      541 aagaacccat cccagccgat tgggaacaag cgagctatat cgaacgcggt gattatttag
      601 tgaaccatct gggcgactgc atcggctgcc acacgccgcg cactgccagt aaccaactcg
      661 ataaaagtct gtttctctcc ggggtgccgg caaaatacgc cggggtaaaa accggcccga
      721 gcggtgtcgc cggctttccc ggaccgcgcg gcgcgcgttt ctacgccaaa aatattacac
      781 ccgacaatga aaccgggatt ggcacatggt ccgaagaaca gttcgtcaaa acatttaaga
      841 ccggcattag acccgacggg tttcaatacc cgttaacgcc gatggagtgg ggcatatacc
      901 gcaatatgaa ggaggaagac gtccgcgcca tgtatcgcta cttgcgcacc atcaagccgg
      961 tctcaaaccg ggtgccggcg aacatcccgc cgcaataacc ggctatcccg cctgacggcg
     1021 cgcagcatga tcccgccatg cctcgagcta gcgcgcccaa atttgattga agaaaccgct
     1081 gctctccatc tccgccaaat agcgccggtc catcatctcc tggggcttga cctcattggc
     1141 gcgcggattg gtgcgggcga cttcttcgat catcggctgg agcgccggcg ctttcatttc
     1201 cagccgcggt tccatgactt tcatttcgat ggcgtaactg gcttccaaca ccgcgcgatc
     1261 tttgatccgc agttttttct ccatcacccg gaagaccaat tctttatcgc ggtgcatcgc
     1321 tcttgaggct tcggccatgg cgcgcatgaa tcgaccgatc gcagggccgc gcttggccat
     1381 gagcgagcgc cgcgtcgcga tcgtcgaagc ggcgtaagca attccaatat ccgggccgaa
     1441 tacgacatag cgaaagccca gcgccagcgc tctgccgtcg ctcggcggca acaacgtcgc
     1501 ggcatcgatc cgccctgaca ttagcgcgcc gacggtttcc gcttcgccgc cggtctggat
     1561 gaacgtgatg tccttatccg tattcatgcc ggcgcggcga aacgcttgga ccgtgaagta
     1621 atgggtgttg ctgccaatgc gagtgacgcc gatgc
//
LOCUS       DATIRS010000417         2604 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1212202, whole genome shotgun sequence.
ACCESSION   DATIRS010000417 DATIRS010000000
VERSION     DATIRS010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2604)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2604)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2604
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1212202"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..666)
                     /locus_tag="VLM90_05230"
     CDS             complement(<1..666)
                     /locus_tag="VLM90_05230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="UGSC family (seleno)protein"
                     /protein_id="HSQ12394.1"
                     /translation="MTLDNKYGVPTVALHTHVFEKVVESVNRVHGMPRAPRAFVPQPV
                     MGKTAEQLRAYIDGKDPLSGRPVMQEVIEGLTQPIDDSGVVSEKFTHAATPRLVDADS
                     EENLQQLFLDKNWTDKLPIVLPTEKRVAAMLAHTSHKPDEVVGHMRSTHFREYWEYTV
                     EKVAVNAVMAGARPEYFPVILALASTGVTARGSTSSSAAAMVVVNGPIRNEIKMNSGT
                     GAMG"
     gene            complement(700..1011)
                     /locus_tag="VLM90_05235"
     CDS             complement(700..1011)
                     /locus_tag="VLM90_05235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12395.1"
                     /translation="MADSTNATQNMSVLNPVGYPPKITPKALAPRLDSLDGKTVYLVD
                     PRFDDSGLFLRQLQNWFTDNMPTVKTKFVEMNNVYTKDDPKTWEIIKGDGDAAIVGVG
                     H"
     gene            complement(1179..2249)
                     /locus_tag="VLM90_05240"
     CDS             complement(1179..2249)
                     /locus_tag="VLM90_05240"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ12396.1"
                     /translation="MFEKFPFLLRGSKYAPALLLVLLCAAMTAPGQAQKEPYYQGKTI
                     RIIVGFTAGGLSDQWARMFARSMPKFIPGRPNMIVQNMPGASSVVAANFVYSVAKPDG
                     LTVGIPNSSLYLTQLIGRTEVKFDVRKFDWIGSQEKWTQMLYFRADAPFKTIGDVIKA
                     KEPPKCGASGFASSGYILPKILEETVGAKFNVIVGYAGGKEIDLAVEKGEVVCRGHDI
                     SSHFGREPFNTWHAKGYDRHLVQDARSRDPRLPETPTIWEIMNEYKTPQVSRSVAETV
                     LTANDFGRALIAPPGTRADLVKILRAAYAQALKDPELLAEVKKSNLDIDYTPGEQLQK
                     LAREVMDQSAEVIERVKKLLAE"
BASE COUNT          491 a          759 c          761 g          593 t
ORIGIN      
        1 tcccatggcg ccggtgccgc tgttcatctt gatttcgttt ctaatcggcc cgttgaccac
       61 gaccatcgcc gccgccgagc tcgatgtgct gccgcgggcg gtgacgccgg tggaggcgag
      121 cgccaggatc accgggaaat attccggccg ggcgccggcc attaccgcgt tgaccgcgac
      181 tttttccacc gtgtattccc agtattctct gaaatgggtc gagcgcatat ggccgaccac
      241 ttcgtcgggc ttgtggctgg tgtgggcgag cattgccgcc acgcgctttt ccgtcggcag
      301 gacgatgggc agcttgtcgg tccaattttt atcgaggaac aactgctgca aattctcttc
      361 gctatcggca tcgaccaagc gcggcgtcgc ggcatgggtg aatttctcac tgacaacgcc
      421 gctgtcgtcg atcggttggg tcagcccttc gatgacttcc tgcatcaccg gccggccgct
      481 gagcggatcc ttgccgtcga tgtaggcgcg cagttgctcg gcggtcttgc ccatcaccgg
      541 ttgcggcacg aaggcgcgcg gcgcccgcgg catgccatgg acgcggttca ccgactcgac
      601 gactttttca aacacatggg tgtgcagcgc cacggtgggc acgccgtact tattatcgag
      661 ggtcattgca tgcgcggcga ccgccggcgc acaggtgctt caatgaccga caccgacgat
      721 ggcggcgtcg ccgtcccctt tgattatctc ccaggtcttg ggatcgtcct tggtgtagac
      781 gttgttcatc tctacgaact tggtttttac cgtcggcatg ttgtcggtga accaattctg
      841 caactggcgc agaaacagtc ccgagtcgtc gaagcgcgga tcgactaaat agacggtctt
      901 gccgtccagg ctgtcgagcc gcggcgccag cgctttgggc gtgatcttgg gcggatagcc
      961 caccgggttt aacaccgaca tgttttgggt tgcgttcgtg ctgtccgcca taggtaaatc
     1021 ctcctcgctc tatttatgat ctagccggaa ggtaagcaac cggtttttcg gcagtggttc
     1081 agtttcataa gaactttggt aggggctacc cggcgcctgc cctgagcgga gtcgacgggt
     1141 ggtcgcctgt cccagagggc agacacgcag gtctacccct actcggcgag aagttttttc
     1201 actctctcga tcacctcggc gctctggtcc atgacttcgc gcgcgagctt ttgcaactgc
     1261 tctcccggcg tgtagtcgat atccaggttg ctcttcttca cctcggcaag caattcggga
     1321 tccttgagcg cttgcgcata agcggcgcgc aggatcttca cgaggtcagc gcgtgtgccc
     1381 ggcggggcga tcagcgcgcg gccaaaatca ttcgccgtga gcaccgtttc ggcgacactc
     1441 cggctcacct gcggggtctt gtattcgttc atgatctccc agatcgtcgg cgtctcgggc
     1501 agcctcgggt cgcggctgcg cgcgtcctgc accagatgac ggtcgtaacc tttcgcgtgc
     1561 caagtgttaa acggttcacg gccgaagtga gatgagatgt catgaccgcg gcagacgacc
     1621 tcgccctttt ccacggcaag atcgatttct ttgccgccgg cgtaaccgac gatgacattg
     1681 aatttcgcgc cgacggtttc ctcgagaatc ttgggtaaaa tataaccaga gctggcaaag
     1741 cccgaggcgc cgcatttcgg cggctctttc gccttgatga catcgccgat ggttttgaaa
     1801 ggagcgtcgg cgcgaaaata gagcatctgc gtccattttt cttggctgcc gatccagtcg
     1861 aatttgcgca cgtcgaactt gacctcggtg cgtccgatca gctgcgtaag atagaggctg
     1921 ctattcggta tgccgacggt gaggccgtcc ggtttggcga cgctgtaaac gaaattggcg
     1981 gccaccaccg aactggcgcc gggcatgttt tgcacgatca tgttcggccg acccggaata
     2041 aacttcggca tgctccgggc gaacatgcgc gcccattgat cggacaaacc gccggcggtg
     2101 aaaccgacga taattcgaat cgtcttgcct tggtagtagg gctccttttg cgcctgacct
     2161 ggagccgtca tggctgcgca gagcagaacc aagagcaaag ccggcgcata tttcgacccg
     2221 cgtaacaaaa atggaaattt ttcaaacatt ttatacctca gaaagagaag ggagattacc
     2281 acaaagaaca caagggtcac aaaggagggg cgcgatgaaa tcgcgccctc ggaccgaaga
     2341 cggggattaa attaccgcaa agagcgcaaa gtagatttcc gaaccacgga cgcgaaggtt
     2401 tcggaagtct attattccga acttcgtgct cttcgtgttc tccttcgaaa atacacgtac
     2461 agcgatgatc tgcgcatcga taacgactct ctgttccgat aggggtcggg aacggctttc
     2521 gccgtccccg ccctccgaac cgtgcgtgcg gttttcccgc acacggctct ccagtcggta
     2581 gtttcctcat cgggattggc tcgc
//
LOCUS       DATIRS010000418         2352 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1114159, whole genome shotgun sequence.
ACCESSION   DATIRS010000418 DATIRS010000000
VERSION     DATIRS010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2352
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1114159"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..475
                     /locus_tag="VLM90_05245"
     CDS             <1..475
                     /locus_tag="VLM90_05245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12397.1"
                     /translation="HDENIPGYRGVVEPQMVKTGMVTPLYYHDVIAPDGTMRKSPDYP
                     ELNSFTEVYTQIHGKAPSGMKYQALTAANMASQNLNRVALLPPGSPMEAVLTMRRAFS
                     QLAKDEEFIAEAKKVMRFQPRFEIGEDGEKLREKVLRAPAEVIDFVRKYVEEARK"
     gene            529..1509
                     /locus_tag="VLM90_05250"
     CDS             529..1509
                     /locus_tag="VLM90_05250"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12398.1"
                     /translation="MTKFLLQLSLALFFISANALAQEKVKFPISASSKTLGYSPLWVA
                     TKLGFFDKQNLDVQLVLVAGADKSTMALVGGSVNVSSGGADTVIAAVEQGADLVSIGG
                     VINGLTHYIMGGKKFKSFEDLRGANLGSSGLTSGTAFVLRRVLRAKGLEYPRDYNLIN
                     VGGSAQAFLSLTAGRIDAAIIAVPLNYEAAQMGYPVIAKVVDFIPNYQLTEVTVKRAW
                     AEKNRGLTVRFMKGLIHAMRWMHDNKEPAIEFLSKEMQLKPEQARRGWEYYTENKIWP
                     PNAETNVEGVRTVIQIAAERGQFKGGALPQPAKYLDHSYVEEALKELGKR"
     gene            1511..>2352
                     /locus_tag="VLM90_05255"
     CDS             1511..>2352
                     /locus_tag="VLM90_05255"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSQ12399.1"
                     /translation="MKKKTTKKTTKTTTKKTKSSKVSSAKSKTNPKAKFRAAKAATSW
                     QPQRRHYVHDGLKMHYWEWGDPKEETYVFVHGVRDQGRSWDHFLDELISRGVPIKHAV
                     ALDLRGHGDSEWPSTSRGYAHEDFLTDLAGLLKHLDKDPVTIIGHSLGGSMCLLYAGT
                     FPERVKRMVLLESLGPFARSDDEVPNIMAERLKGRDYVEIPVPHETLQAAAKAIQKTF
                     PLIPDKAALHMAQHGTNTNGGRYRWKHDPILRYRTTTAISEGQVEAFIRRLKCPILFV
                     YGTE"
BASE COUNT          542 a          640 c          723 g          447 t
ORIGIN      
        1 ccatgacgaa aacatcccgg gttaccgcgg cgtggtcgag ccgcaaatgg tcaagaccgg
       61 catggtgacg ccgctttact atcacgatgt gatcgcgccc gacggcacca tgcgtaagag
      121 tccggattat cccgagctga attccttcac cgaggtatac acccaaatcc acggcaaggc
      181 gccgagcggg atgaaatatc aggcgctgac ggcggccaat atggcgagcc agaatcttaa
      241 ccgtgtggcg ctcttgccgc caggctcgcc catggaagcg gtgctgacca tgcgccgggc
      301 attcagccag ctcgccaagg atgaggagtt catcgccgaa gcgaaaaaag tgatgcgctt
      361 tcagccgcgc tttgagatcg gtgaggatgg cgaaaagctg cgcgaaaaag ttctgcgagc
      421 gcccgcggag gtcatcgatt tcgtgcgcaa gtatgttgaa gaggcgagga aatagaccgt
      481 tcaatgttca agggttcaag gttcaaggtt ttcggagggc ggttttcaat gacgaagttt
      541 ctgctgcaat tgtcgctcgc tctgtttttt atttcggcaa atgctttggc gcaggagaaa
      601 gtcaagttcc cgatcagcgc gtcgtcgaag acactgggct atagtccgct ctgggtggcg
      661 accaagctgg gctttttcga caagcaaaac ttggacgtcc agctcgtgct ggtggctggg
      721 gctgacaagt cgaccatggc gttggtcggc ggctcggtga acgtctccag cggcggcgcc
      781 gatacggtga tcgcggcggt ggagcagggc gcggatcttg tatccatcgg cggcgtcatc
      841 aatggcctga cgcactacat catggggggc aagaaattta agtccttcga agatctgcgc
      901 ggcgccaatc tcggctcgtc ggggctgact tccggcacgg cgttcgtgct gcgccgggtc
      961 ttgcgggcga aggggctgga gtatccgcgc gattataatc tgatcaacgt cggcggatcg
     1021 gcgcaagcgt tcttatcgtt gaccgcggga cggatcgacg cggcgatcat tgccgtgccg
     1081 ctcaattacg aagcggcgca gatgggctac ccggtgatcg ctaaagtcgt cgacttcatt
     1141 cccaattatc agttgaccga agtcacggtg aaacgggcct gggcggagaa gaaccgtggc
     1201 ttgaccgtgc gcttcatgaa aggtttaatt cacgccatgc gctggatgca cgacaataag
     1261 gaaccggcca tcgagttttt gtcgaaagaa atgcagttaa agcccgagca agcgcgccgc
     1321 ggctgggagt actacacgga gaacaagatc tggcctccca acgccgagac caacgtcgaa
     1381 ggcgtgcgca cggtgatcca aatcgccgcc gagcgcggcc agttcaaagg cggcgcgctg
     1441 ccgcagccgg cgaagtatct cgatcacagc tacgttgagg aagctttaaa ggagttggga
     1501 aaaagatagg atgaaaaaga aaactacgaa gaaaactact aagacaacca cgaaaaaaac
     1561 taaaagttcc aaagttagct cggcgaaaag taagacgaac cccaaggcga aatttcgcgc
     1621 tgccaaagcc gcaacgagtt ggcaaccgca gcggcgtcac tacgttcacg acggtttgaa
     1681 aatgcattat tgggaatggg gtgaccccaa ggaggagacg tacgtcttcg tccacggcgt
     1741 gcgcgatcaa gggcgcagtt gggatcattt tcttgacgag ctgatcagcc gcggcgtgcc
     1801 gatcaagcat gcggtggcgc tcgacctgcg cggccacggc gacagcgagt ggccgagcac
     1861 cagccggggc tacgcccatg aagactttct caccgatctc gccggattgc tgaagcactt
     1921 ggacaaagat ccggtgacga tcattggcca ctcgctgggc ggcagcatgt gtttgcttta
     1981 cgccggcacg tttccggaaa gggtcaagcg catggtgctg ctcgaatccc tcggcccgtt
     2041 cgcgcgcagc gacgacgaag tgccgaatat catggcggag cgcttgaagg gccgggacta
     2101 cgtcgagatt cccgtccccc atgaaacctt gcaggcggcg gccaaagcga tccagaaaac
     2161 cttcccgctg attcccgata aggcggcact gcatatggcg cagcatggca ccaacaccaa
     2221 tggcggccgc taccgctgga agcatgatcc gatcctgcgt taccgcacca ccacggcgat
     2281 ctccgaagga caggtcgagg catttatccg ccggctcaaa tgtccgattc tattcgtcta
     2341 cggcacggag ag
//
LOCUS       DATIRS010000419         2236 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_31822, whole genome shotgun sequence.
ACCESSION   DATIRS010000419 DATIRS010000000
VERSION     DATIRS010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2236
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31822"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(217..2157)
                     /locus_tag="VLM90_05260"
     CDS             complement(217..2157)
                     /locus_tag="VLM90_05260"
                     /inference="COORDINATES: protein motif:HMM:NF013974.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HSQ12400.1"
                     /translation="MSAFPFPGISTTADGSEAVVWVETQITQGACAYPITPSTNMGGG
                     YQLAVANGQKNLWGEPLVFLELESEHSSASTCEGFALAGGRVANFTSGQGLILMKEVL
                     YVIAGKRLPVVFHIGARALTSQGLNIHAGHDDVMGVADCGWGMLFARNVQEAADLALI
                     ARRIAEESETPFFNIQDGFLTTHTIESLQLPEPELMKQFVGDPNGQHRLRNLMHPGHP
                     IMSGVVQNQDSYMKGKIAQRYFYDRIPAAMGRVMDEFYGLTGRRYGTVDGYGLLDAEY
                     VVVGLGSFLETATATAKHLREQQGLKVGTLNITCFRPFPGPAIVAALKSVKALAVIER
                     MDNPMAQSNPLTAEIKSAFADALAGAPGYPKVASMPRIYSAAAGLGSRDVRPGDFVAA
                     IDHMREKRERRFFVLGIEHELALNPEKEPDVRPKGAFSMRGHSVGGYGSVTTNKVIAT
                     IIGDLFGLRVQAYPMYGSEKKGLPTTYFLTVAEEPIRAHAELQHVDFVPLNNVNAFNL
                     GNPLSGLIGGGTVFVQHHSRNPHQVWASIPANARDFIRRQQIHLFALDAVKVAQEVTS
                     HAQLSQRMQGIVLLGVFLQVAPFVAARGLGDVELYAAIERSLRKFFGKRGDKVVQENL
                     AAVKRGRSEVFEIPREVMVAAA"
BASE COUNT          472 a          668 c          633 g          463 t
ORIGIN      
        1 catgcagggc attgtgctgc tcggagtgtt tttgcaagtc gcaccgttcg tcgccgccag
       61 aggcttaggc gatgtcgagc tgtacgcggc aatcgaacgg tcgctacgaa agttttttcg
      121 ctcatgctaa atccttcgtt caaggttcaa gaattcaagt gcttaatcgg cgctccgacc
      181 atgaaaattg aacttttgca gcttgaacag tcatttttac gccgcggcca ccatgacttc
      241 gcgcggaatc tcaaatacct cgctgcgccc gcgcttgacc gccgctaaat tttcctgcac
      301 gaccttgtcg ccgcgcttgc caaaaaactt gcgtagcgac cgttcgattg ccgcgtacag
      361 ctcgacatcg cctaagcctc tggcggcgac gaacggtgcg acttgcaaaa acactccgag
      421 cagaacgatg ccctgcatgc gctggcttag ctgtgcgtgg gaagtgacct cctgggccac
      481 cttcaccgcg tcaagggcga acaggtgaat ctgctggcgc cggatgaaat ccctggcgtt
      541 ggctgggatc gatgcccaca cctggtgcgg attacggcta tggtgttgca cgaacaccgt
      601 gccgccgcca atcaatccac tcagcggatt gccgagatta aaagcattga cgttattgag
      661 cggcacgaaa tcaacatgct gcaactccgc gtgggcacgg atcggctcct cggcgacggt
      721 aagaaagtaa gtcgtcggca aacctttttt ctccgagcca tacatcggat aagcctgtac
      781 gcgcaggccg aacagatcgc cgatgatggt cgcgatcact ttgttggtgg tcaccgagcc
      841 atagccgccc accgaatggc cgcgcatgga aaacgctccc ttggggcgca cgtccggttc
      901 cttttccggg ttgagcgcca gctcatgttc gatgccgaga acgaaaaatc tgcgctcacg
      961 cttttcgcgc atgtgatcga tggcggcgac aaaatcgccg ggccgcacat cccggctgcc
     1021 caatccagcc gcggcggaat agatccgcgg catcgacgca accttcgggt agcctggcgc
     1081 gccggccagc gcatcggcaa aggccgactt gatttccgcg gtcagcggat ttgactgcgc
     1141 catgggattg tccatgcgct cgatcaccgc caacgctttg acggatttaa gcgctgcgac
     1201 gattgccggc ccgggaaacg gccggaaaca ggtaatgttg agggtgccga ctttgagacc
     1261 ttgctgctct cgcaaatgtt tcgccgtcgc cgtcgcggtc tccaagaaac tgcccaagcc
     1321 gacgacgaca tactccgcat ctaacaaacc gtagccgtcg acggtgccgt agcgccggcc
     1381 ggtgagtccg tagaactcgt ccatgacccg gcccattgcg gcgggaatgc ggtcgtagaa
     1441 ataacgctgg gcgatcttgc ctttcatgta gctgtcttgg ttctgcacca cgccgctcat
     1501 gatgggatgg ccagggtgca tcaggttgcg cagccgatgt tggccgttgg gatcgccgac
     1561 aaactgtttc atgagctcag gttcgggcag ctgcaagctc tcgatggtgt gggttgtcag
     1621 aaaaccgtct tggatattga aaaacggcgt ctcggactct tcggcgatgc gcctggcgat
     1681 gagcgctaga tccgcagcct cttggacatt gcgcgcgaac agcatgcccc agccgcagtc
     1741 cgccacgccc atgacgtcgt cgtggccggc gtgaatattc aagccttgag aagtcagcgc
     1801 ccgcgcgcca atatgaaaca ccaccggcaa acgcttgccg gcgatgacgt agagcacttc
     1861 cttcatgaga atcaaccctt gtccagaggt gaagttggcg acgcgcccgc cagcgagagc
     1921 gaatccttcg caggtgctcg ccgaactatg ctcggattcc agttcaagaa atactagggg
     1981 ttcgccccaa agatttttct gtccgttggc cacagccaat tgatagccac cgcccatgtt
     2041 cgtggacggg gtgatcggat aagcacaagc gccttgggtg atctgggttt ccacccatac
     2101 caccgcttcc gaaccatcgg ctgtggtgga aatgccggga aaaggaaatg cgctcatact
     2161 tagtcccgcc acccatgcca aaaatattta caaccgcgca acaagtcgcc cgcggtccac
     2221 agcggcacta ggtagc
//
LOCUS       DATIRS010000420         2838 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1704143, whole genome shotgun sequence.
ACCESSION   DATIRS010000420 DATIRS010000000
VERSION     DATIRS010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2838)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2838)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2838
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1704143"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..525
                     /locus_tag="VLM90_05265"
     CDS             <1..525
                     /locus_tag="VLM90_05265"
                     /inference="COORDINATES: protein motif:HMM:NF015415.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HSQ12401.1"
                     /translation="SGEALTDLAQIFIALDGTVKIASPNRQRTIAVEELFLDFYTTSL
                     AEDEILTHVLLPPLPPRSGIDYIRFSSSSVVDKPAAGVAVRLTLNSQATIQTARIVLG
                     CVGATPVRARRAEAMITGKTLTADFALEAGSIASQECSPTSDLRGSEKYKRAIVGTLV
                     QRAAMKASEHASRT"
     gene            535..999
                     /locus_tag="VLM90_05270"
     CDS             535..999
                     /locus_tag="VLM90_05270"
                     /inference="COORDINATES: protein motif:HMM:NF013923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HSQ12402.1"
                     /translation="MKKTISLKINGSERSVEVEARTTLLDLVREQFGLTGAKLGCDIQ
                     VCGACTLLVDGKAVSACSMLAVDVDGCAIETIEGLSSKDKLHPLQEAFMEFGALQCGY
                     CTSGFILTAKALLAECPQPSDQQIRDYLAGNFCRCGCYQEIVQAVKNVRGEA"
     gene            1088..>2838
                     /locus_tag="VLM90_05275"
     CDS             1088..>2838
                     /locus_tag="VLM90_05275"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSQ12403.1"
                     /translation="MEPTEIGKSYRRLDYETKVTGRAQYLADMSVPGMLHGKILRSPY
                     PHARITRIDATKAEKVSGVMAVLTRDDILHDQGIEPFYGPVFKDQTIVATEKVRHVGD
                     PVAAVAALTVDAAEAALKLIEVDYEELPAVLNIDDALKAGAMLVHDSVKLPASGFADL
                     ADLKPIDGTNLCTHFRLNRGDIDKGFADADQVFEDTFTLPATQHCFLETHACIASVEP
                     GGRITVWATTQNPFVVRTQLANIFKVPVAKVRVIVPYLGGGYGGKVYPKVEPITVALS
                     QKAGRPVRLVLSREEVFYTITKHAAVIRMKTGVKKDGTLIARECEIHLDTGAYAEIGP
                     RVAKKSGYTAAGPYKIPNLKIDSYSVYTNKPPAGAFRGFGVSQSAWAVESQMDIIAAA
                     LNMDPVELRKHNGYNEGDKFVTEETLRAVGLKECIDEVAKSIGWDSNKFKSRGVLPYA
                     RAVQEPALSPSKDSTGGNLRRGKGLACMIKATITPSISCAVVKLNEDASLSIYSGTVE
                     MGQGSETVLAQIAGKELGIPMPIIQVLGVDTDVVPYDLTTSSSRSTFHMGKAVQLAAQ
                     DIKRQLKQIVVNEYDVP"
BASE COUNT          612 a          771 c          891 g          564 t
ORIGIN      
        1 tccggcgagg cgctgacgga cttggcgcaa atctttatcg cactcgacgg tacggttaag
       61 attgccagtc ccaaccgcca gcgaacgatt gccgttgaag agctatttct cgacttttac
      121 acgaccagct tggccgaaga cgagattctc actcacgttc tgttgccgcc gctgccgccg
      181 cgctcgggca tcgattacat tcgcttctcc agcagctcgg tagtcgataa gccggcggct
      241 ggcgtggcgg tgcggctaac attaaattcg caagcgacga tacaaaccgc gcgcatcgtg
      301 cttggctgtg tcggcgcgac gccggtacgg gcgcgccggg ccgaggcgat gattacgggc
      361 aagacgctga ccgccgactt tgcgttagaa gccggcagca ttgcgtcgca ggagtgcagt
      421 ccgacaagcg acctgcgcgg ctcggagaaa tataagcgcg cgattgtcgg cacgctggtg
      481 cagcgcgcgg cgatgaaagc gagcgaacat gcttcacgca cttgattcga acacatgaaa
      541 aaaactattt cacttaaaat taatggcagc gagcgtagcg tggaagtcga ggcgcgcacg
      601 acgctgctgg acttagtgcg ggagcagttt ggactcaccg gcgcgaagtt gggctgcgat
      661 atacaagttt gcggcgcgtg cacgttgttg gtcgatggca aggcggtgag tgcttgttcg
      721 atgttagctg tcgacgtgga cggttgcgcg atcgagacca tcgaaggatt gagtagcaag
      781 gacaaactcc atccgcttca ggaagcgttc atggagtttg gcgcgctgca gtgcggttac
      841 tgcacgtccg gctttatttt aacggccaag gcgttgctcg cggagtgtcc acaaccatcc
      901 gatcagcaga ttcgcgatta tctggcgggc aacttctgcc gctgcggttg ttatcaggag
      961 attgtccaag cggtgaaaaa cgttaggggt gaggcgtaag gggtgagggg tttttccgga
     1021 cgcctaacgc cttacccgtc accccttacg gaatttagga cacgagtatc gaggttgtag
     1081 agaacaaatg gaacccactg aaatcggcaa atcctatcgc cggctcgatt acgaaaccaa
     1141 ggtgaccgga cgggcgcagt acttggcgga tatgagcgtg ccggggatgt tacatggcaa
     1201 gattttgcgc agcccctacc cgcatgcgcg gatcacgcgc atcgacgcga ccaaggcgga
     1261 gaaagtttcc ggcgtcatgg cggtgctgac gcgcgatgac attttacacg accaaggcat
     1321 cgagccgttt tacgggccgg tgttcaagga tcagaccatt gtcgcgacgg agaaggtgcg
     1381 ccatgtcggc gacccggtgg cggcggtggc ggcattgacc gtcgatgccg ctgaagcggc
     1441 gctcaaatta atcgaagtcg attatgaaga gctgccggcg gtgctcaaca ttgacgacgc
     1501 gctcaaggcc ggcgcgatgc tggttcacga ctcggtcaag ctgccggctt ccggtttcgc
     1561 cgatctcgcc gatttgaaac ccatcgacgg cactaacctt tgcacccact tccgcctcaa
     1621 tcgcggcgac atcgacaaag gtttcgccga cgcggatcag gttttcgaag ataccttcac
     1681 tctgccggcg acgcagcatt gttttctcga gactcacgcc tgcatcgcgt ccgtcgagcc
     1741 cggcggacgc atcacggtct gggcgacgac gcagaatccg ttcgtggtgc gcacccagct
     1801 ggcgaatatt ttcaaagttc cagtggcaaa ggtgcgcgtg atcgtaccct acctcggcgg
     1861 cggttacggc ggcaaagtct atcccaaggt cgaaccgatc accgtggcgt tgtcgcagaa
     1921 agccggccgg ccggtgcgct tggtgctttc ccgcgaagaa gttttttaca ccatcaccaa
     1981 gcatgcggcg gtgatccgca tgaagaccgg cgtgaaaaag gacggcacgc tgatcgcgcg
     2041 cgagtgcgag atccatctcg acaccggcgc ctatgccgag atcggcccgc gggtggcgaa
     2101 aaaatccggc tacacggcgg cgggaccgta taaaattccc aacctcaaga tcgattccta
     2161 ttcggtctac accaacaaac cgccggccgg cgcgtttcgc ggcttcggcg tttcgcaatc
     2221 ggcatgggcg gtggagtcgc agatggatat catcgccgcc gcgcttaata tggacccggt
     2281 ggagctgcgc aagcacaacg gctacaacga gggcgataag ttcgtcaccg aagagacgct
     2341 gcgagcggtg ggattgaaag agtgtattga cgaagtggcg aagtcgatcg gttgggattc
     2401 aaataaattc aaaagtaggg gcgtattgcc atacgcccgt gcggttcaag agcctgccct
     2461 gagtccgtcg aaggattcaa ccggagggaa cttgcggcgc ggcaaaggac tggcgtgcat
     2521 gatcaaggcg acgattacgc cgtcgatttc ctgcgcggtg gtgaagctga acgaggatgc
     2581 gagcctatct atatatagcg ggaccgtgga gatggggcag ggatcggaga ccgtgctggc
     2641 gcagatcgcc ggcaaggagt tgggtattcc gatgccgatc attcaagtgc tcggcgtcga
     2701 caccgacgtg gtgccgtacg atttgaccac ttcgtcgagc cgttcgacgt ttcacatggg
     2761 caaggcggtg cagctggccg cccaggatat caagcgccaa ctcaagcaaa tcgttgtcaa
     2821 tgaatacgac gtgccgga
//
LOCUS       DATIRS010000421         1502 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_31872, whole genome shotgun sequence.
ACCESSION   DATIRS010000421 DATIRS010000000
VERSION     DATIRS010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31872"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..494)
                     /locus_tag="VLM90_05280"
     CDS             complement(<1..494)
                     /locus_tag="VLM90_05280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12404.1"
                     /translation="MAPIVARFRLTVLSACLFFSAAGSAFSQAPFYQGKTITIVRGSS
                     PGGVGEMRTRAWVNHLKKHIPGNPTMIIEFMPGAGGQKAANHLYRGARADGLVIGALP
                     SGMVSSAIMAESGVQYDLNKFIYLGSPNSASHYVFFTNRKLGLGSMEKLRAHAGLRVG
                     AHTVG"
     gene            complement(475..>1502)
                     /locus_tag="VLM90_05285"
     CDS             complement(475..>1502)
                     /locus_tag="VLM90_05285"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSQ12405.1"
                     /translation="AKGFKLVLDKLGWDGPVSKEGHGRGVGFGTTDPGAPLASTATVH
                     VLSDGSVVFLCGTVELGQGAKTIMSQIVAEELRVPLDHVAIRPIDTAYTPFDRSTGSS
                     RSTTVMGKAVELAGGDARRQIVELAMEHFECPEDAVTLKDGEAIAGGRKISYGELIHK
                     HFAMQGGELVGTGYAHSGMAPTPANPLFWEIGIGAVEVSVDQETGKVHVEKYVTAADA
                     GKALHPLQCEGQDEGSAMMGFGHTFYETYHYDGGQMINSTMVDYKVPTFDDVPDEFES
                     ILIEDANGPGPYGAKGLGEGGIIPVAPAVANAVFWCTGARVKSLPLTPEKVWRAIKEV
                     SDGTHSR"
BASE COUNT          305 a          489 c          402 g          306 t
ORIGIN      
        1 ccgacggtat gggcgccgac tcttagtccc gcatgggccc gcagtttttc catactaccc
       61 agccccagct ttctattggt aaaaaacaca tagtgcgacg cgctgttcgg cgaccccagg
      121 tagataaact tattcaggtc atattgaacg cccgactctg ccatgatcgc cgacgatacc
      181 atcccgcttg gcaaggcgcc gatgaccagg ccgtcggcgc gcgcgccgcg ataaagatgg
      241 ttggcagcct tctgaccgcc cgctcccggc atgaactcga tgatcatggt tggattgccc
      301 ggaatatgct tttttagatg attcacccac gctctcgtgc gcatctcgcc gacgccgcca
      361 ggcgagctgc cccgcacaat ggtgatggtt ttgccttgat aaaagggcgc ctgggaaaac
      421 gccgaaccgg cagcggaaaa aaacaggcaa gcgctcaaaa ccgtgagcct aaatctagcg
      481 actatgggtg ccatcggaaa cctccttgat cgcccgccat actttttccg gcgttagcgg
      541 cagcgacttc acccgcgcgc cggtgcacca aaacaccgca ttcgccacgg cgggagcaac
      601 cggaatgatt ccgccctcgc ccaagccttt agcgccatac ggtcccggac cgttggcgtc
      661 ttcgatgagt atcgactcaa actcgtcagg cacatcgtcg aacgtcggca ctttgtaatc
      721 gaccatcgtc gaattgatca tctgcccgcc gtcataatgg taggtttcat agaaagtgtg
      781 gccaaagccc atcatcgccg aaccttcgtc ttgaccctca cattgcagcg gatgcagcgc
      841 tttgccggca tcggcggccg taacatattt ttcgacgtga actttcccgg tctcctgatc
      901 gactgaaact tccaccgcgc caatgccgat ctcccagaac agcggattgg ccggcgtcgg
      961 cgccatgccg ctgtgcgcgt aaccggtgcc gaccagctcg ccgccctgca tggcaaaatg
     1021 cttgtgaatc aattcgccgt aactgatttt cctgccgccc gcgatcgctt cgccgtcttt
     1081 cagtgtcaca gcgtcctcgg gacattcaaa atgttccatt gcgagttcga caatttgccg
     1141 gcgcgcatcg ccgccggcca actcgacggc cttgcccatg accgtcgttg agcggctcga
     1201 tcccgtcgag cggtcaaacg gcgtgtacgc cgtgtcgatg ggacgaatcg ccacatgatc
     1261 gagcggcacg cgcaactctt cggcgacgat ctgactcatg atggtcttgg cgccctggcc
     1321 gagctccacc gtgccgcaca aaaatacgac gctgccgtcc gaaaggacgt gaaccgtggc
     1381 agtcgacgcc aggggcgcac cgggatcggt ggtgccaaag ccgacgcctc ggccatgtcc
     1441 ctctttggac accggaccgt cccaacccag cttgtcgagc acgagtttga agcctttggc
     1501 ca
//
LOCUS       DATIRS010000422         1634 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1015917, whole genome shotgun sequence.
ACCESSION   DATIRS010000422 DATIRS010000000
VERSION     DATIRS010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1634
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1015917"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..317
                     /locus_tag="VLM90_05290"
     CDS             <1..317
                     /locus_tag="VLM90_05290"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSQ12406.1"
                     /translation="RGEGTDRLVAIMRANRDRLRPILMTTLALVAGMLPLALGSGPGA
                     EERRAVAVVVIGGQTLCLLLTLLVTPVAYSMFEDWAKSLNLGRMRRVSRFCAERLRWS
                     NR"
     gene            complement(440..1477)
                     /locus_tag="VLM90_05295"
     CDS             complement(440..1477)
                     /locus_tag="VLM90_05295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12407.1"
                     /translation="MKIRVAVLSLLLFCAAPVWAQVPFFQDKTIAVILGGPPAGSADL
                     RTRAVTNILRKHIPGNPTIVIQHMGGGGGRQAANHVYKVAKPDGLTIGSMGAALVTNA
                     ILGEPGVQYDIDKLIYLGTPDSAQHYLFITHGEAGFSSLEKLRAASNVRIAAQSVGHP
                     IYITGRVFAYLLGLKEPKFVVGFTGPEIDVALAQREADSRVSTGDSLIRRNRDWLDKG
                     LVDVHASIEIPKGERHPRFAQVPELGNFAKSDREKKMVEMFRAFRIAGQNFFLPPGVP
                     RDRVQILADAMRKTLSDPEFLKEYQKLSGEAASPLAADALDKVIRELPRDAAVIELFN
                     KLAGADPLPAR"
BASE COUNT          335 a          487 c          469 g          343 t
ORIGIN      
        1 tgcgcggcga aggcacggac aggctcgtcg ccatcatgcg cgccaaccgc gatcggctgc
       61 gtccgatact gatgactaca ctggcgctgg ttgccggtat gctgccgctt gccctcggca
      121 gcggccccgg tgccgaagaa cggcgagccg tcgccgttgt ggtcatcggc gggcaaactc
      181 tatgcttgct tcttacgttg ctggtcaccc cagtggccta ctcgatgttc gaggattggg
      241 ccaagagtct caatctcggc cgcatgcgcc gcgtcagccg cttttgcgcc gagcggctgc
      301 gttggtcgaa tcggtaagac aacctgaccg caacaaatag ccatcctgtg ggtttttgcg
      361 ttcgccccta gtagaagatc tctcgtcgag tcaatacctg ttccgttgtt taaaaaacac
      421 cgcgatcaaa agtacaaatt cacctggccg gcaacggatc ggcgccggcc aatttgttga
      481 atagctcgat cacagccgcg tctcgtggca gttcgcgaat gactttgtcc aacgcgtccg
      541 cggccagggg cgatgccgct tcgccggaga gcttttggta ttctttcaag aactcggggt
      601 cgctgagagt tttacgcatg gcgtcggcaa gtatctgcac gcgatctctg ggcacgcccg
      661 gcggtaggaa aaagttttgc ccggcgatgc ggaaggcgcg aaacatttcg accatttttt
      721 tctcgcggtc cgatttcgcg aagttgccca gttccggcac ctgcgcgaaa cgcgggtggc
      781 gttcgccctt gggaatctcg atgctggcat ggacgtccac cagtcccttg tccaaccaat
      841 cgcggttgcg ccggatcagc gagtcgccgg tgctgacccg actatcggcc tcgcgctggg
      901 ccagggcgac atcgatctca gggccggtaa agccgacgac aaatttgggc tctttcaaac
      961 caagcagata agcgaatacc cgaccggtga tgtaaattgg atggcccact gactgggcgg
     1021 cgatccgcac gttgctcgcg gcgcgcagtt tttccaagct ggagaacccc gcttcgccat
     1081 gggtgatgaa gagatagtgc tgcgcgctgt ccggcgtgcc cagataaatt aacttgtcga
     1141 tatcgtattg cacccccggc tcgccgagta ttgcgttggt caccagcgcc gcacccatgc
     1201 tgccgatagt caaaccatcg ggcttggcta ctttgtaaac gtgattggcc gcctgccggc
     1261 cgccgccacc gcccatatgc tgaatcacaa tcgttgggtt gccgggaata tgtttgcgga
     1321 gaatattggt caccgcgcgg gtgcgcaaat ccgccgaacc cgccggcggc ccaccgagaa
     1381 tcacggcaat cgtcttatct tgaaagaaag gaacctgggc ccaaactggc gcagcgcaga
     1441 atagcagcaa cgacaatacg gccactcgaa tcttcatatc agttcggcaa cacagtcctc
     1501 aggatgtaag ctctatggaa tcagcgcgct gcggcatcgg caactcagca agaattaacg
     1561 attcccgacc ggcgatgcta tcggagcggc tcaaagaacg catcgtctac gtgcacataa
     1621 ccgtgaactc tatc
//
LOCUS       DATIRS010000423         2324 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_130218, whole genome shotgun sequence.
ACCESSION   DATIRS010000423 DATIRS010000000
VERSION     DATIRS010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2324)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2324)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2324
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130218"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..269
                     /locus_tag="VLM90_05300"
     CDS             <1..269
                     /locus_tag="VLM90_05300"
                     /inference="COORDINATES: protein motif:HMM:NF016993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Phenylacetic acid catabolic protein"
                     /protein_id="HSQ12408.1"
                     /translation="FGTNMSAEWAAKGGEHKARIQKSVDYWYVKGLDMFGNSKSYRSE
                     RYMHWGLKRRPNSVARQQYKDEIDGLLTKMGLTIPDPNKGRLYT"
     gene            354..545
                     /locus_tag="VLM90_05305"
     CDS             354..545
                     /locus_tag="VLM90_05305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12409.1"
                     /translation="MEAAPNTEAIDQQFKEFIQGLKKAVGAGIPHLKDDPKIVDQAIA
                     DCKEILDVVIEGDVKQWLS"
     gene            663..1442
                     /locus_tag="VLM90_05310"
     CDS             663..1442
                     /locus_tag="VLM90_05310"
                     /inference="COORDINATES: protein motif:HMM:NF013200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HSQ12410.1"
                     /translation="MNVVVCGKVIPASTVIIELDANNKRMVRKGVPHELDPMAASAVE
                     EGLRLVEKHGGQVVLVTMGTSDVTIGIRNALAMGVASAVHILDDAVAGSDTLATAKLL
                     AAAIKKQEFDIVLCATESGDSYSGIVHGQIAQLLGIPPLTFAKEITVDGGKVAIKRQS
                     ESGYDLVESTLPALVACSSGINEPRYPQLKGIMAAKKKEIKVYTAADLGLAPDQVGEK
                     GAREKVLTIGRPPKRQAGKAVTDEGEGGKQIADFLAEIKVI"
     gene            1443..2039
                     /locus_tag="VLM90_05315"
     CDS             1443..2039
                     /locus_tag="VLM90_05315"
                     /inference="COORDINATES: protein motif:HMM:NF013200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12411.1"
                     /translation="MAETIWVYAEIGDDKITTTSLEMLAKASEAGKAEVVLLGPAPDD
                     AVQTLANHGASKIYHCADAVYQDYLTLPAAETVAGLIEKHNPAVMLFASSYAGRDLVA
                     NLSARLDCGAITDVGDFELKDGSVVATIPALGASYENTSTLLNQGTKLLVVRPKSFEP
                     KENPQTLAVEEVPAAADDSLRKVHMKERVVVKREGPSL"
BASE COUNT          549 a          661 c          708 g          406 t
ORIGIN      
        1 attttggcac caacatgtcg gcggagtggg cggccaaggg cggcgagcac aaagcacgga
       61 ttcaaaagtc cgtcgattac tggtacgtca aaggcctcga tatgttcggc aacagcaaat
      121 cgtatcgctc ggagcgttac atgcactggg gcttgaaacg ccggcccaac tccgtggcgc
      181 gccagcagta caaggacgag attgatggct tgctgaccaa gatgggcttg acgattcccg
      241 acccgaacaa agggcggctt tacacataat caaaatcgtt tcgggtttcg tgtctcgggt
      301 tccgggttta acgcgaagcc cgagattcga aggcgcgaag cgcgaggagt gtcatggaag
      361 cagcaccgaa taccgaagca atagaccagc agttcaagga attcattcag ggcttgaaga
      421 aagcggtggg cgccggcata ccgcatttga aggacgatcc gaaaatcgtc gaccaggcga
      481 tcgccgactg caaggaaatt ctcgacgtgg tcattgaagg cgatgtcaag caatggctct
      541 cctgagccac tgattaaaaa ctttaaccga atcgaatcag tcccacgacc agaggcgcct
      601 tgtcccaaag gcgcctttgt cgtatttgta acaggcgaat tcatgcacgg gagagcaaaa
      661 cattgaacgt cgtcgtctgc ggtaaagtca ttcccgcgag cacggtcatc atcgagctcg
      721 acgccaacaa caaacgcatg gtgcgcaaag gcgtgcccca cgagctcgac ccgatggcgg
      781 cgagcgcggt ggaagaaggg ctgcgtttgg tcgagaaaca tggcggccag gtggtattgg
      841 tgaccatggg cacgagcgat gtaaccatcg gtatccgcaa cgcgttggcc atgggcgtgg
      901 cgtcggcggt gcatattctc gacgacgcgg tggccggttc cgacacgctg gcgacggcga
      961 aactgttagc cgcggcgatc aagaaacagg aattcgatat cgttctatgc gccaccgaaa
     1021 gcggcgacag ctactccggc atcgtccatg ggcaaatcgc ccagctgctg ggaattccac
     1081 cgcttacctt tgccaaagag atcaccgtcg acggcggcaa ggtcgcgatc aagcgccaga
     1141 gcgagtcggg ctatgatctc gtcgagtcga cgttgccggc gttggtggcg tgcagcagcg
     1201 gcatcaacga accgcgctat ccgcagctca agggcatcat ggcggcgaag aaaaaagaga
     1261 tcaaagtcta taccgctgcc gatctcggcc tagcgccgga ccaggtgggc gaaaaaggcg
     1321 cgcgtgaaaa agttttgacc atcggccgtc cgcccaagcg gcaagccggc aaagcggtaa
     1381 ccgacgaagg ggaaggcggc aagcagatcg cggactttct tgctgaaatc aaggtgatct
     1441 aagtggcgga aacaatctgg gtatacgcgg aaattggcga cgataagata accaccactt
     1501 cgttggagat gctcgccaaa gcctccgaag ccggcaaggc cgaggtggtg ctccttggcc
     1561 cggcgcctga cgatgccgtg cagacgctgg ccaatcacgg tgccagcaag atctaccact
     1621 gcgccgacgc agtttaccaa gactatctga ctttaccggc tgccgagacc gttgccggcc
     1681 tgattgaaaa acataatccc gcggtgatgt tgtttgcgtc gagctacgcc ggccgcgact
     1741 tggtcgccaa cctgagcgcc cggctcgact gcggcgcgat caccgatgtc ggcgatttcg
     1801 agctcaaaga cggcagcgtg gtggcgacga ttccagcact cggcgctagc tacgagaaca
     1861 ccagcaccct gctcaatcag ggaaccaagc ttctggtcgt gcggccgaag tctttcgaac
     1921 cgaaggaaaa tccgcaaacg ctggccgttg aagaagtccc ggcggcggcg gacgacagct
     1981 tgcgcaaagt gcacatgaaa gagcgggtcg tcgtcaaacg tgaaggcccg tcgctgtaag
     2041 gcgccaagat cgtcgtctcc ggcggccgcg gcctcaaggg cgaagagcaa ttcaacctgc
     2101 tcaaggatct cgccgatgtc ctcggcggcg ccgtcggcgc cagccgcgcc gcggtggacg
     2161 ccggctgggt gccctacgcc atgcagatcg gccagaccgg caagacggtc aagccggata
     2221 tttattttgc cgtcggcata tccggcgccg tgcagcatct ctcgggcatg aagacctcca
     2281 agtacatcat caccatcaac aaagacccgg acgcgccgat cttc
//
LOCUS       DATIRS010000424         2514 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1704322, whole genome shotgun sequence.
ACCESSION   DATIRS010000424 DATIRS010000000
VERSION     DATIRS010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2514)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2514)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2514
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1704322"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            59..1165
                     /locus_tag="VLM90_05320"
     CDS             59..1165
                     /locus_tag="VLM90_05320"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF003333.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HSQ12412.1"
                     /translation="MAAKKPKNNGLVEKKLIGVADVVISAAQRSQDPSLAIPVRSLAN
                     VNFNAKRGIIEMGRRKQARTFFNVGMAKKFMQTVLVADALAELQRANLTTSLREIYYR
                     TKHTIKNSNENTFDGQNESDPLIEDLEVTLEALREELHVRAENSGTVVGPLTIVDDGD
                     RVDCTKLGKGGYSVPSIVEPEYIQISKCTADFVLLVEKGTQWNRLSEDKFWRRYNCIL
                     LTGNGQPPRGVRRLARRLHEDYKLPVYVLVDNDPWGYYIYSVIKQGSINLAFESERMA
                     IPKAKFIGFSSADPERYGLPRNVGIKLNDKDINRARELMKYKWFQKKEWQEEIKGMLT
                     SGLKFELDALANKDFQYLTKTYLPRKLKDKDWLD"
     gene            complement(1307..2098)
                     /locus_tag="VLM90_05325"
     CDS             complement(1307..2098)
                     /locus_tag="VLM90_05325"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ12413.1"
                     /translation="MIDLSRFSLTGRTAVITGGSGGIGRACAVAFAKAGANIVIASLP
                     PESIPPVIQEVEALGVKGLGLAVDVSDEPQVKSLVEQTLAQFGRIDVLVNVAGGSYSR
                     NPDMPAFKRAPLLELAPEDFMTAYAVNTKTAFLCAKAVAPAMKTAGKGSIVNIGSISG
                     RGTKKERADMAAYGTAKAAVMNLSIHMAQHWGPEIRVNAIAPGIIDTPRPAGSTRQDD
                     WAEALKKIALGRAGSADEVASVALFLASDAASFVSGAIIDVNGGE"
     gene            complement(2223..>2514)
                     /locus_tag="VLM90_05330"
     CDS             complement(2223..>2514)
                     /locus_tag="VLM90_05330"
                     /inference="COORDINATES: protein motif:HMM:NF016235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF475 domain-containing protein"
                     /protein_id="HSQ12414.1"
                     /translation="IGAFALSNNLFIIAIGLGIGAMFVRSLTIMLVEKEALASYRYLE
                     HGAFYAIIALGVIMFLNAVTHIPEVVTGLIGCGFIVWAFCDSIRFNRRQRGA"
BASE COUNT          630 a          731 c          682 g          471 t
ORIGIN      
        1 gacaccaagc aaatgactct agcgctggaa aaacccggca aaaagacagg aaagaaaaat
       61 ggcggcaaaa aaaccaaaaa ataacggctt agtcgaaaaa aaactgatcg gcgtcgccga
      121 tgtcgtgatc agcgcggcgc agcgcagcca ggacccatcg ctggcgattc cagtgcgcag
      181 cctggccaac gtcaacttca acgccaagcg cggcatcatc gagatgggcc ggcgcaagca
      241 ggcgcggacg tttttcaacg tcggcatggc caaaaaattc atgcagacgg tgctcgtcgc
      301 cgacgctctg gccgagttgc agcgtgccaa cctgaccact tcactgcggg aaatttatta
      361 ccgcaccaag cacacgatca agaactccaa cgaaaacacc ttcgacggcc agaacgaatc
      421 cgacccgttg atcgaagatc tcgaagtcac cctcgaagcg ctgcgcgaag aactgcatgt
      481 ccgcgccgaa aattccggca ccgtcgtggg gccgttgacc atcgtcgatg acggcgaccg
      541 ggtcgattgc accaagctag gaaaaggcgg ctactcggtg ccatccatcg tcgagccgga
      601 gtatattcag atcagcaagt gcaccgcgga cttcgtgctg ctggtcgaaa aaggcaccca
      661 atggaaccgg ctgtcggaag ataaattttg gcgccggtac aattgcatcc tgctcaccgg
      721 caacggccag ccgccgcgcg gcgtgcgccg gctggcgcgc cggctgcatg aagactacaa
      781 gctgcccgtc tatgttctcg tcgataatga tccctggggc tattatatct actcggtcat
      841 caagcagggc tcgatcaact tggccttcga aagcgaacgg atggcgatcc ccaaggcgaa
      901 gttcatcggc ttctccagcg ccgacccgga gcgctacggc ctgccacgca acgtcggcat
      961 caagttgaac gacaaagaca tcaaccgcgc tagagaatta atgaagtaca aatggtttca
     1021 gaaaaaagaa tggcaggaag aaatcaaagg catgttgacg agcggcctga aattcgagct
     1081 cgacgccctc gccaacaaag attttcagta cttgacgaag acctacttgc cgagaaaatt
     1141 gaaggacaag gattggctgg attagtacct cgctggaaac cttgggcgaa tctttgtctt
     1201 cactctgtca tttcaaacga aggtgagaaa tctctccgaa tagtctgggt cgagatttct
     1261 ccctgcggtc gaaatgacaa aaactccgac gaaaacgaaa gaccgatcac tccccaccgt
     1321 tgacatcgat aatcgcaccg ctcacgaagc tcgccgcgtc cgaagctaaa aacagcgcca
     1381 cgctggcgac ttcgtcggcg ctgccggcgc ggccgagggc gatttttttg agcgcctcgg
     1441 cccaatcgtc ctggcgcgtg cttcctgccg gtcttggcgt gtcgatgatg cccggagcaa
     1501 tcgcattgac gcggatctcc ggcccccaat gctgcgccat gtgaattgac aaattcatca
     1561 ccgccgcctt ggccgtgcca taagctgcca tgtcggctcg ttctttcttg gtgccgcggc
     1621 cggaaatcga accgatattg acaatgctgc ccttgccggc tgttttcatc gccggtgcca
     1681 ccgccttggc gcatagaaag gcggtcttgg tgttaaccgc gtaggcggtc ataaaatctt
     1741 ccggtgccaa ttccaacaat ggcgcgcgct tgaacgccgg catatcggga ttgcggctgt
     1801 aagaaccgcc ggcgacattg accagaacat cgatgcggcc aaactgcgct aaagtttgct
     1861 cgaccaggga tttcacctgc ggctcatcgg acacatctac cgccagacca agccctttta
     1921 ccccaagcgc ttcgacttcc tggatcaccg gcggaatcga ctccggcggc aacgaagcga
     1981 tgacgatgtt cgctcccgct ttggcgaagg ccaccgcaca agcccggcca atgccgccgc
     2041 tgccgccggt aataaccgcc gtccggccgg tcaatgaaaa acgcgaaaga tcgatcatgg
     2101 cgacatcctc gtgatcaaat agcaccggtt gtaatcgatt cccgtcttat aatggcaaat
     2161 gttgggaatg caaggtgccg cgccaattca gcgcccggca agtatgtaat gactagatta
     2221 aatcacgcac cgcgctggcg gcggttaaag cggatcgaat cgcaaaacgc ccagacgata
     2281 aagccacagc cgatcaggcc ggtgactact tctgggatat gggtgacggc attgaggaac
     2341 attatcacgc ccagcgcgat gatcgcgtag aacgcgccat gctctagata gcggtacgag
     2401 gcgagggctt ccttttccac cagcatgatg gtcagacttc gaacgaacat ggcgccgata
     2461 ccgagaccga tggcgataat gaacaggtta ttggaaagcg caaaggcgcc gatc
//
LOCUS       DATIRS010000425         1996 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_32094, whole genome shotgun sequence.
ACCESSION   DATIRS010000425 DATIRS010000000
VERSION     DATIRS010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1996)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1996)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1996
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32094"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1786)
                     /locus_tag="VLM90_05335"
     CDS             complement(<1..1786)
                     /locus_tag="VLM90_05335"
                     /inference="COORDINATES: protein motif:HMM:NF014774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HSQ12415.1"
                     /translation="MLTTLEKISFVLLAAGSLYYGGNKIYDVYRAIARGKPDARFDNL
                     ADRIRRALWIVLTQQSVFKTRPVVSLLHAMIFYGFIFYFLVNLVDVLEGFFAIHARGG
                     LWNPFNIAGDLLTASVLTGMVGMVIRRLLIKPQDFAFAENTPVQPEVRAGIFRDSTFV
                     AAFIIFHVGCRLLFKATQLAQQGDDPFQPVSSLFAGLFTGFAPGVLEVLNHIYWWGAL
                     GSILLFIPYFPRSKHIHIFLAPINLALNKDKPGVLQPMDFEKEETFGAAKLEDFTWPR
                     LLDSYSCIMCNRCQDVCPASNTGKALSPAAMLINERYELNKIFPSFSQGQESPRRLLD
                     FALNEESAWACTTCNACIEVCPVGNEQMLHIIDVRRERVLGAAEFPKGLQNTFNHMER
                     AGNPFGMPVDERAAWMKGLPFPVPTLAERPDPEVLYWVGCAVAFDPRAQKIAQSMATI
                     FNAAGLDWAVLGKDEKCTGDTARRTGNEYLFVQMAEENIGVLNQIKAKTIVTTCPHCF
                     HTIANEYPQFGGNYVVKHHTDFIDELVKSGKVKLSTDNHGSVTYHDPCYLGRHNGIFN
                     QPRGLIESTGAKLTEPSRNRGNSFCCGAG"
BASE COUNT          469 a          561 c          567 g          399 t
ORIGIN      
        1 cgccggcgcc gcaacaaaaa ctattaccgc gattgcggct gggctcggtc aacttggcgc
       61 cggtggattc gatcaggccg cgcggttgat tgaagatgcc gttatgccgt ccgaggtagc
      121 aggggtcatg ataggtcacc gaaccgtggt tatcggtaga gagcttcacc ttgccgcttt
      181 tgaccaactc atcgatgaag tcggtatgat gcttgacgac ataattgccg ccgaactgcg
      241 gatactcgtt ggcgatggtg tgaaagcaat gcggacaagt ggtgacgatg gttttcgcct
      301 tgatctgatt caacacgccg atattttctt cggccatctg gacaaataga tattcgttgc
      361 cggtgcgccg cgccgtgtcg ccggtgcatt tctcgtcctt gccgagcacc gcccagtcca
      421 gtccagcggc gttgaagatc gtcgccatgc tctgcgcgat cttttgcgcc cgcggatcga
      481 aagcgacggc acaaccaacc caatagagca cttcaggatc gggcctttcg gccaaagtcg
      541 gcaccgggaa cggcaatccc ttcatccacg cggcgcgctc atcgaccggc attccgaatg
      601 ggttgccggc gcgctccatg tgattgaaag tattttgcag tcctttggga aactcagccg
      661 cgcccagcac ccgctcgcgg cgcacgtcga tgatatgcag catctgctca ttgcccaccg
      721 gacagacttc aatgcaagcg ttgcaggtcg tgcaggccca ggccgactct tcgttaaggg
      781 cgaaatcgag cagtcgccgc gggctctcct gcccttggga aaagctggga aaaatcttgt
      841 tgagctcata gcgttcgttg atgagcatgg ccgccgggct gagcgccttg ccggtgttgg
      901 aagcggggca gacatcctgg cagcgattgc acatgataca gctgtacgag tctaacaagc
      961 gcggccaggt aaaatcctcc agttttgccg cgccgaaggt ctcttccttc tcgaagtcca
     1021 ttggctgcag cacgcctggc ttgtccttgt tcaaagccaa attgatcggc gcaaggaaaa
     1081 tatgaatatg tttggagcgc gggaagtagg gaatgaacag caagatcgaa cccagcgcgc
     1141 cccaccaata aatatgattg aggacttcga ggacgccggg agcgaagcca gtaaagaggc
     1201 ccgcaaacag cgaactcacc ggctgaaacg gatcatcgcc ctgctgggcc agctgcgtcg
     1261 ccttaaacag cagcctgcag ccgacgtgaa agatgatgaa ggccgcgaca aacgtcgagt
     1321 cgcgaaatat gccggcgcgc acttccggtt gcaccggagt attctcggcg aatgcgaaat
     1381 cctgcggctt aattagcaga cggcgaatca ccatgccgac catgcccgtc agcacactgg
     1441 cggtgagcag atcgccggcg atattgaatg gattccagag gccgccgcgg gcatggatag
     1501 cgaaaaagcc ttcgagaaca tcgacaaggt taaccaggaa gtaaaatata aatccgtaga
     1561 agatcatcgc gtggagcaac gacaccaccg gccgtgtctt gaacacgctt tgttgggtta
     1621 aaacaatcca cagggcacgg cggatgcggt cggccagatt gtcgaagcgc gcatccggct
     1681 tgcccctggc gatcgcccgg taaacgtcgt aaatcttgtt gccgccgtag taaagcgagc
     1741 cggcggcgag cagaacaaac gaaatctttt caagtgtcgt caacatcgcg gtgcagacgc
     1801 cctccgtttc aatccttact taacgttgac agaacgagtt tgtcaaaata gtcggcgaga
     1861 aatatcactg gcgcggcaaa tcccccgcca ccccaccaca gtttcgagcg accgtagccg
     1921 gctgtgttac agcgctaagg tcattgcaat caccacaacg gacgggaaga caaatgtcgg
     1981 gccataaaat cttacc
//
LOCUS       DATIRS010000426         1923 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_327570, whole genome shotgun sequence.
ACCESSION   DATIRS010000426 DATIRS010000000
VERSION     DATIRS010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1923
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_327570"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1407)
                     /locus_tag="VLM90_05340"
     CDS             complement(<1..1407)
                     /locus_tag="VLM90_05340"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HSQ12416.1"
                     /translation="MFADLTCGALSELESGRSWSSREIAMRVAAGAAGLRAHGLQRGD
                     RLFILYGNNLEFFVDLLAAWNVGASVVPVDNRLTPFEVENLARTVTPKIALTDATVPT
                     ALGDVLVALGVELLGSSDLAADAVPSVPSARAFCAARLDDEALILFTSGTTGVPKGVV
                     HTHRSLRARWLSLRESLGIDCFRRTLCLLPTHFGHGLICNSLFPWLFGQDLIIAPPFS
                     PYLLMRLGPIVDEQKITFLSSVPSMWGLSLKGSKPPQGKTLQRIHCGSAPLSAHLWGQ
                     IQQWSGIRAVYNAYGITETGSWVAGTSIEGFEPEDGLVGVPWGAVIKILKNAEPQTPF
                     AVGAECKVAETGYVWINTPALMQGYYGQPELTDQVISGGWFVTGDMGLIDDRGRFYLK
                     GRERDEINKGGAKVYPADVDAVVERFEPATAVCTFAIADPAYGQNVAMAVVLSHQDDA
                     TLRQLHGWLKEHLAEFKIP"
     gene            1550..>1923
                     /locus_tag="VLM90_05345"
     CDS             1550..>1923
                     /locus_tag="VLM90_05345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12417.1"
                     /translation="MDQRRRLVIRGVIFIGLMLLLFFFSRYIPRPFSAFAPPGAELDD
                     FEGIYSSSDKLGKFLQQLGPYSPAVFVVFQILQVIAAPFPGELTGVAGGFVYGETIGF
                     ILSTLGLSIGSWVAFELASILGR"
BASE COUNT          411 a          594 c          526 g          392 t
ORIGIN      
        1 ggggatttta aattccgcca aatgctcttt gagccagcca tgaagctggc gcagcgtcgc
       61 gtcatcctga tggcttaata ccaccgccat ggcgacattc tgaccgtagg ccggatcggc
      121 gatggcaaaa gtacataccg cagtggcggg ctcgaaccgt tcgaccaccg cgtcgacatc
      181 ggcgggatag accttggcgc cgcctttatt gatttcgtcc cgctcgcgcc ccttgagata
      241 gaatctgccg cgatcgtcga tgagccccat gtccccggtg acgaaccagc cgcccgaaat
      301 cacctgatcg gtgagttcgg gctggccgta atagccttgc atcagcgccg gcgtgttgat
      361 ccagacatag cccgtctcag cgactttgca ctcggcgccg acggcaaacg gagtctgcgg
      421 ttcagcgttt ttgagaatct tgatcaccgc accccaaggc acaccgacta ggccatcttc
      481 cggttcgaag ccttcaatgc ttgtgccggc cacccaactg ccggtttcag taatgccgta
      541 ggcgttatac accgcgcgaa ttcccgacca ttgttgaatc tgaccccata ggtgcgctga
      601 caagggcgcc gagccgcaat gaatacgctg gagggttttg ccctgcggcg gcttactgcc
      661 cttcaagctc aacccccaca tggatggcac ggaggagaga aacgtaatct tctgctcatc
      721 gacgatcggg ccaaggcgca ttaacaaata agggctgaat ggcggcgcga tgatcaaatc
      781 ctggccgaaa agccagggaa ataaactgtt gcaaatcaag ccatgaccga aatgggtcgg
      841 caacaagcat agcgtgcggc gaaagcaatc aataccgaga ctctcgcgca aagatagcca
      901 acgcgcgcgc aatgagcgat gggtgtgaac cacgccttta ggcactccgg tggttccgga
      961 ggtaaacaga atcaacgcct catcgtcgag acgtgcggcg caaaatgccc tggccgacgg
     1021 taccgatggt accgcgtccg ccgctaaatc gctggagccg agcagctcaa ctccaagcgc
     1081 aaccagcacg tcaccaagag ccgtgggcac cgtcgcatcg gtgagcgcga tctttggcgt
     1141 caccgtccgc gctaggtttt cgacttcaaa gggcgtcaac cggttgtcca ccggcacaac
     1201 gctcgcgccg acattccacg cggccagcag gtcgacaaag aattcgagat tattgccgta
     1261 aagtatgaat aggcgatcgc cacgctgtaa cccatgggcg cgcagcccgg cggcgccggc
     1321 cgccacgcgc atggcgatct cccggctgct ccagctgcgg cccgactcca gctcgctcag
     1381 agcaccgcat gtcaaatcgg caaacatgaa gaataaatat ttctgaatac taaactattt
     1441 agtagcaacc ccgtccaaac caagcaaggc gaattgctcc gataatggca tgctcggcgc
     1501 aatgcggctc tcgtctttgc aatcaatagt tgctataaag cgccggatga tggatcagcg
     1561 ccgccggctc gtcatacgcg gggtcatctt catcggcctc atgttgctgc tgtttttttt
     1621 cagccgctac attccgcggc cgtttagcgc cttcgcgcct cccggcgccg agctcgacga
     1681 tttcgaaggc atctattcca gcagcgataa gctcggcaag tttctccaac agctgggccc
     1741 ctattcgccg gcggtcttcg tggtgtttca gattctccaa gtgatcgccg cgccctttcc
     1801 cggcgagctt accggcgtcg ccggcggttt tgtctacggc gagaccatcg gatttattct
     1861 ctccaccctc ggcctgtcca tcggctcttg ggtggccttt gagctagcaa gtatcctcgg
     1921 gcg
//
LOCUS       DATIRS010000427         7191 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1605956, whole genome shotgun sequence.
ACCESSION   DATIRS010000427 DATIRS010000000
VERSION     DATIRS010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 7191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7191
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1605956"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1195
                     /gene="icd"
                     /locus_tag="VLM90_05350"
     CDS             <1..1195
                     /gene="icd"
                     /locus_tag="VLM90_05350"
                     /inference="COORDINATES: protein motif:HMM:NF005425.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HSQ12418.1"
                     /translation="YAGEKSYKQYNSWLHEETVPAFTEFLVGIKGPLTTPIGGGMTSL
                     NVGLRKLLDLYVCLRPVRYFKGVPSPVKHPEFVDMVVFRENTEDIYTGIEFPNGTEAN
                     AKFKSLLKENFPKDYAKIRFPDTASVGLKPVSVEGTERLVRAAIQWALVNKRKNINFV
                     HKGNIMKYTEGSFMEWGYALAKREFRGDVIAERESWILGNKEANPNISVADNAKAIDP
                     GFDMMSPDQQNDIKKEVEEALKLWPTHGDGKWKSKLMLKDSIADVTLQFVLIRPKDYD
                     VIATLNLNGDYLSDALAAQVGGIGIAPGANINYESGHAVFEATHGTAPKYADLDKVNP
                     GSVILSGEMMLRYMGWGEAADLIIKGIEGAVDNKTVTYDFERLMPGSKLVTCSGFGDA
                     IIANM"
     gene            1216..2160
                     /gene="mdh"
                     /locus_tag="VLM90_05355"
     CDS             1216..2160
                     /gene="mdh"
                     /locus_tag="VLM90_05355"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: protein motif:HMM:NF004863.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HSQ12419.1"
                     /translation="MARKKIALIGAGNIGGSMAHLALLKGLGDVVLFDVVDGLPQGKA
                     LDLSHAGPVEGFDGNVMGTNKYEDIAGADVCIVTAGIARKPGMSRDDLLGTNCKILSS
                     VAEGIKTHAANSFVIVITNPLDSMVTLMQRKLGFPKNRVVGQSGILDSSRYRSFIAKE
                     LNVSVKSVQAMVLGGHGDDMVPVRSSCSIGGVPVEKLISGARLNEIEARVRNAGGEVV
                     ALLKTGSAYFSPASAAIQMTEAFLFDKKELLPCAALLEGEYGVNGYYFCVPVQIGAGG
                     VEKIIDIGLNAADKKAFDESLNHVKDIVQAMDRVLSSA"
     gene            2230..3390
                     /gene="sucC"
                     /locus_tag="VLM90_05360"
     CDS             2230..3390
                     /gene="sucC"
                     /locus_tag="VLM90_05360"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR01016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HSQ12420.1"
                     /translation="MNIHEFQAKEILKRFGVVVPRSIVASTPAEAKQAAQDLGGGVCV
                     VKAQIHAGGRGKGGGVKVVKTPDEAMARAGDMLGKNLVTHQTGPEGRLVRRVLVEQGL
                     NIARELYLAMVLDRAQSRVTVICSSEGGVEIEEVAEKHPEKILKETIDPVIGLAAYQC
                     RRIAFALGIPAALTAKFIGAMQGLYRAFDECDAALAEINPLILTKEGQVLALDAKMNF
                     DSNAFFRQKDILALRDTDEEDPREVEASKFDLSYISLDGNIACMVNGAGLAMATMDIV
                     KVYGGEPANFLDVGGGADKEKVANAFRILLADERVKGVLINIFGGIMRCDVLAQGVVD
                     AARELSIKVPLVVRMQGTNVEQGRKILADSGLTIISADTMAEAAEKIVKAIK"
     gene            3506..4378
                     /gene="sucD"
                     /locus_tag="VLM90_05365"
     CDS             3506..4378
                     /gene="sucD"
                     /locus_tag="VLM90_05365"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF004230.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HSQ12421.1"
                     /translation="MAILVNKNTRVLTQGITGATGQFHTKACQEYGTQMVAGVTPGKG
                     GTAYEGIPIFDTVDQAVRETGANATVIYVPPPFAADAILEAADANIPLIICITEGVPV
                     RDMVKVKRFLAGRTSQLLGPNCPGTITPGECKIGIMPGHIHRPGSIGVVSRSGTLTYE
                     AVDQLSRLGLGQSTCVGIGGDPVHGFDFVDVLKLFNDDPATEAVVMIGEIGGSSEEEA
                     AVWIQSHMTKPMAGFIAGQTAPSGKRMGHAGAIISGGKGTAREKVTAMQQANIRMASS
                     PAEIGRSMQEALGK"
     gene            4380..4799
                     /gene="ndk"
                     /locus_tag="VLM90_05370"
     CDS             4380..4799
                     /gene="ndk"
                     /locus_tag="VLM90_05370"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: protein motif:HMM:NF001908.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HSQ12422.1"
                     /translation="MAMERTLSIVKPDAVARNLIGAILKKFESAGLRIAGGKLIRLSP
                     EQAQAFYAVHKARPFFQGLCDYMSSGPIFVSVLEGDNAITKNREVMGATDPAKAAPGT
                     IRQEFGQDIEKNAVHGSDAPETAASEIAFYFKPEELF"
     gene            4826..5905
                     /gene="rlmN"
                     /locus_tag="VLM90_05375"
     CDS             4826..5905
                     /gene="rlmN"
                     /locus_tag="VLM90_05375"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: protein motif:HMM:TIGR00048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HSQ12423.1"
                     /translation="MKADEKPNIKDLSASEFAEFLAAAKQPAYRAKQICQWLFREHVT
                     DFAAMTNLPAALREQLDKSFTIGRLAILRRHDAQDGTVKFLFGLAGGQSIESVLIPEK
                     HRLTLCISTQVGCAYGCAFCATALLGFKRNLTCGEIVEQILEAGRTLSDDRRISNIVV
                     MGMGEPLANYTQTLRAIEIMVEASWGLGIAPRKITLSTVGLVPQIEKLMEQTNVTLAI
                     SLHAATEELRGRLMPINRKYSLEQLIDCCRNLPLPRRKRITFEYVLLGGVNDSLADAA
                     ALCRLLRGVPSKVNLIPFNPHPGSEFHQPSDAAVKRFQQVLFDHKLQVNVRRPRGDDI
                     AAACGQLQGQVQRELLVSVAPVAAN"
     gene            5910..6770
                     /gene="mtnP"
                     /locus_tag="VLM90_05380"
     CDS             5910..6770
                     /gene="mtnP"
                     /locus_tag="VLM90_05380"
                     /EC_number="2.4.2.28"
                     /inference="COORDINATES: protein motif:HMM:TIGR01694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017061 - S-methyl-5-thioadenosine
                     phosphorylase activity [Evidence IEA];
                     GO_process: GO:0006168 - adenine salvage [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5'-thioadenosine phosphorylase"
                     /protein_id="HSQ12424.1"
                     /translation="MKPPIVGVIGGSGLYRMDGLKGVREVAVSTPFGKPSDKLVRGKL
                     GNIDLVFLPRHGRGHRWLPTEVNFRANIFAMKKLGVERIISVSAVGSLRAEIAPGHLV
                     VPDQFIDRTSQRPSTFFGKGLAAHVSLADPFCQELSAVLVQSAEQAGATVHRGGTYLC
                     IEGPQFSTRAESHLYRSWGAHVIGMTNLQEAKLAREAEICFGTLALATDFDCWNEQAG
                     DVEIERVLAVLHNNVALARRTIGAALAALAEPRLCSCASALKDAIITDRRAIAKKLRQ
                     DLRPIIGKYL"
     gene            6767..>7191
                     /locus_tag="VLM90_05385"
     CDS             6767..>7191
                     /locus_tag="VLM90_05385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12425.1"
                     /translation="MSVLVVGTVAFDSIEAPAGSVERILGGSASYFALGASYFAAVRM
                     VGVIGQDFPQDHLDLFTQRGIDIAGIKRDQGDTFHWRGRYHEDINQRDTIELHLNVLA
                     GFKPKLPESYRDAELVFLGNIDPVIQMDVVEQIRHMKLLV"
BASE COUNT         1573 a         1920 c         2149 g         1549 t
ORIGIN      
        1 ctacgccggt gagaagtcgt ataagcagta taacagttgg ttgcacgaag aaaccgtgcc
       61 ggcctttacg gaatttctgg ttggcatcaa ggggcccctg accacaccga tcggcggcgg
      121 tatgacttca ttaaacgtcg gtctacgaaa attgctcgat ctttacgtat gcctgcggcc
      181 cgtgcgttat ttcaaaggcg tgccttcgcc ggtgaagcat cctgaatttg tcgatatggt
      241 ggttttccgc gaaaacaccg aagacattta cacgggcatc gagtttccca acggcaccga
      301 ggccaacgcc aagttcaaat cgctgctcaa agaaaatttt cccaaggact atgccaagat
      361 tcgctttcct gacaccgcat ccgttggctt gaagccggtt tccgtcgagg gcaccgaacg
      421 cttggtgcgc gcggcaattc aatgggcgct ggtcaataag cgcaagaata ttaactttgt
      481 ccataagggc aacatcatga aatacactga gggctcattc atggaatggg gctatgccct
      541 cgccaagcgc gaatttcgcg gcgacgtgat cgccgaacgc gagtcgtgga tcttgggtaa
      601 caaagaggca aacccgaata tcagtgttgc cgataatgcc aaggcgatcg atcctggttt
      661 tgacatgatg tcgccggacc aacagaatga tattaagaaa gaagtcgaag aagcgctcaa
      721 gctctggccg acccacggcg acggtaaatg gaagtccaag ctgatgctca aagactccat
      781 cgccgacgtg acgctacagt tcgtgctcat ccggcccaag gattacgatg tcatcgcgac
      841 gctaaactta aatggtgatt atctctcgga tgccctcgcg gcccaggttg gcggcatcgg
      901 tatcgccccg ggcgcgaaca ttaattacga gtctggccac gcggtgttcg aagcgactca
      961 cggcacggcg ccgaagtatg cggatctcga taaggtgaat ccaggttcgg taattctctc
     1021 cggcgaaatg atgctccgct atatggggtg gggcgaagcg gctgacttga tcatcaaagg
     1081 catcgaaggg gcagtcgata acaagaccgt gacttacgat ttcgagcggc ttatgccggg
     1141 ttcgaaactc gttacctgct ctggattcgg cgacgcgatt atcgccaata tgtaactttc
     1201 gaagaggata aagttgtggc taggaaaaag attgctttaa ttggcgccgg caacatcggc
     1261 ggttcgatgg cccacctggc gctgctcaag ggactgggcg atgtggtgtt gttcgacgtc
     1321 gtcgacggct tgcctcaagg caaagccctc gacctttcgc atgccggtcc ggttgaaggg
     1381 ttcgacggca atgtcatggg caccaacaag tatgaagata tcgccggcgc cgatgtctgt
     1441 atcgtcaccg ccggtatcgc gcgcaagccg ggcatgagcc gggacgacct gctcggcacc
     1501 aactgcaaga ttctcagctc ggtggccgag ggcatcaaga cccatgcggc taattcgttt
     1561 gtcattgtca tcaccaaccc gttggattcg atggtgactt tgatgcagcg caagctcggc
     1621 ttccccaaga accgcgtggt cggccaatcg gggattctcg attcgtcgcg ttatcggtcg
     1681 ttcatcgcca aagagctgaa cgtttcggtc aagagcgttc aggcgatggt gttgggtggc
     1741 cacggtgacg atatggtgcc ggtgcgcagc tcgtgcagta tcggcggcgt gccggtggag
     1801 aagttgattt ccggcgcgcg tctcaatgaa atcgaagcgc gggtgcgcaa tgccggcggt
     1861 gaagtcgtcg ctctattgaa gaccggctcg gcctattttt caccggcgtc ggcggcgatt
     1921 caaatgaccg aggcgtttct cttcgacaag aaagagctgc tgccgtgcgc ggcattgttg
     1981 gaaggggagt atggcgttaa cggttattac ttctgtgtac cggtccagat cggcgccggc
     2041 ggtgtcgaga aaatcatcga catcggtttg aacgccgcag ataagaaggc cttcgacgaa
     2101 tcgctcaatc atgtcaagga tatcgttcag gcgatggacc gggttctgag ctcggcgtaa
     2161 caacagacag agtatagaga cagagaagga aggtcggacc aggtctctgt ctcatttctc
     2221 tatctctcaa tgaatattca cgaattccaa gccaaggaaa tcctcaagcg tttcggcgta
     2281 gtcgtgccgc gcagcatcgt tgcctcaacg ccggcagagg cgaagcaggc tgcccaggat
     2341 ctcggcggcg gcgtctgcgt ggtcaaagcg cagattcacg ccggcggccg tggtaagggt
     2401 ggcggcgtca aggtcgtcaa aaccccggac gaagccatgg caagagccgg tgacatgctc
     2461 ggcaagaatc tggtgaccca tcaaaccggt ccagaaggcc gtctggtgcg ccgggtgttg
     2521 gtcgaacagg ggctcaatat cgcccgcgag ctgtatctcg ccatggtgct ggatcgcgcg
     2581 caatcccggg tcaccgtcat ttgttcgtcg gagggtggcg ttgagatcga agaggtcgcc
     2641 gaaaagcatc cggaaaaaat cctcaaagag accatcgacc cggtgatcgg tttggcggcg
     2701 tatcagtgcc ggcgcatcgc ttttgcatta gggattcccg ccgcgctcac ggctaagttc
     2761 atcggcgcca tgcaggggct ctaccgcgcc tttgatgagt gtgacgcagc gctggcggag
     2821 atcaaccctt tgatcctcac caaagagggc caggtgctcg ccctcgatgc aaaaatgaac
     2881 ttcgacagca acgccttctt tcgccaaaag gatatcctcg ctctgcgcga taccgatgaa
     2941 gaagatccgc gcgaagtgga ggcgagcaag ttcgatctgt cgtatatttc cctcgacggc
     3001 aacatcgctt gcatggtgaa tggcgccggc ctggcgatgg cgaccatgga catcgtcaaa
     3061 gtgtatggcg gcgagccggc caattttctc gatgtcggcg gcggcgcgga taaagagaag
     3121 gtcgccaacg ccttccgcat cttgctcgcc gatgagcgcg tcaagggcgt gctgatcaat
     3181 attttcggcg gtatcatgcg ctgcgatgtg ttggcccagg gtgtggtgga cgccgccagg
     3241 gagttgagca tcaaggtgcc gttggtcgtg cgcatgcaag ggaccaatgt cgagcaggga
     3301 agaaaaattc tcgccgattc cgggcttacc atcatttctg cggacaccat ggcggaagcg
     3361 gcggaaaaaa tcgtcaaagc aatcaagtaa tttttgattt tggatagccg attttggatt
     3421 aggggaaaag tagagaaaag gcttacggcg ttagtgaatt tgtcagataa tctaaagtct
     3481 aaaagcgaaa atccaaaata aattcatggc cattctagtt aacaagaaca cgcgggtttt
     3541 gacccaaggc atcaccggcg cgaccggcca gtttcacacc aaagcgtgcc aagagtatgg
     3601 cacgcaaatg gtcgccggag tgacgccggg gaagggcggc acggcctacg aggggattcc
     3661 gatcttcgat accgtcgacc aagcggtgcg tgaaaccggc gccaatgcca cggtcattta
     3721 tgtgccgccg ccgtttgccg cggatgcgat tcttgaagcc gccgatgcca acatcccgtt
     3781 gatcatctgt atcaccgagg gtgtgccggt gcgcgacatg gttaaggtca agcgctttct
     3841 cgccggccga acctcgcagc tgcttggccc caattgtcca gggacgatta cccctggtga
     3901 gtgcaagatc ggcatcatgc cgggccatat tcaccgccca ggaagcatcg gtgtggtctc
     3961 gcgcagcggc accttgacct acgaagcggt cgaccagctg agccgcctgg gtctgggcca
     4021 atcgacctgt gttggcatcg gcggcgatcc ggtgcatggt ttcgacttcg tcgatgtctt
     4081 gaagttgttc aacgacgatc cggcaaccga agcggtggtc atgatcggag agatcggcgg
     4141 cagctcggaa gaggaagcgg cggtgtggat tcaatcgcat atgacaaagc ccatggccgg
     4201 atttatcgcc ggccagacgg caccgtctgg aaaacgcatg ggccacgccg gcgcgatcat
     4261 ctccggcggc aagggtacgg cgagggagaa agtcacagcg atgcaacaag cgaatattcg
     4321 catggcgtcg tcgccggcgg aaatcggccg ctcaatgcag gaggcactag gaaagtaata
     4381 tggctatgga aagaacctta tcgattgtta aacctgacgc ggtggcacgc aatctgatcg
     4441 gcgcgatcct gaaaaaattc gaaagcgccg gcctaagaat cgccggcggc aaattgattc
     4501 gcctttcacc cgagcaagcg caggcttttt atgccgtgca taaagcgcgg ccgttttttc
     4561 agggcttgtg tgactacatg tcatctggac cgatcttcgt atcggtgctc gaaggcgata
     4621 acgcgatcac caagaatcgc gaagtgatgg gcgcaacgga cccggcaaaa gccgctccag
     4681 ggacgattcg ccaggagttt ggccaggata tcgagaagaa cgcggtgcat ggttcagacg
     4741 cgccggagac tgccgcgtct gaaatcgctt tttattttaa acctgaagaa ttgttttaag
     4801 gttttgccat attgggtggt ttgacgtgaa ggcagacgag aagcccaata tcaaggattt
     4861 gagcgccagc gagtttgctg aatttctcgc cgcggccaag cagcctgcct atcgcgccaa
     4921 acaaatctgc cagtggctgt tccgtgagca cgtcaccgac ttcgcggcca tgaccaacct
     4981 gccggctgcc ttgcgcgagc agctggacaa gtcttttacc atcggccggt tagcgatcct
     5041 gcgccgccat gacgcccagg acggcacggt aaaattcctc tttggtttgg ccggcggtca
     5101 aagcatcgag agcgttttaa ttcctgaaaa gcatcgctta accctgtgta tttctactca
     5161 ggttggttgc gcttatggct gtgccttctg cgccaccgcg cttttgggtt ttaagcgcaa
     5221 tctcacgtgc ggcgagatcg ttgagcagat tctcgaagcc ggccgcacgc tgtctgacga
     5281 ccggcggata tctaatatcg tcgtcatggg aatgggcgag cccttggcca actatacgca
     5341 gaccttgcgt gccatcgaaa tcatggtcga agcctcttgg gggttgggaa tcgcgccgcg
     5401 gaaaatcacc ttgtcgactg tcggcttggt gccgcaaatc gaaaagttga tggaacaaac
     5461 caacgtcacg ctggcgattt ctttgcacgc cgccaccgag gaattgcgtg gccgcttgat
     5521 gccgatcaac cgcaagtact cgctcgagca gctgatcgac tgttgccgca atttgccgtt
     5581 gccgcggcgc aaacggatca ccttcgagta tgtcttgctc ggcggcgtga acgattcgct
     5641 ggcggacgcc gccgcgctct gccggctgtt acgcggcgtg ccgagcaagg tgaatttaat
     5701 tccgttcaat ccccatccgg gcagcgaatt tcatcagccc agcgatgcgg ccgtcaagcg
     5761 ctttcaacaa gttcttttcg atcataagct gcaagtcaac gtgcgccggc cgcgtggcga
     5821 cgatatcgcg gcggcctgcg gccaactcca gggacaggta caacgggaat tgctcgtctc
     5881 cgttgcgccg gtcgcggcaa actagataca tgaaacctcc aatcgtcggc gtgatcggcg
     5941 gcagcgggct gtaccggatg gacggtctca aaggggtacg ggaagtggcg gtgtcgacgc
     6001 cattcggcaa accctccgac aagctcgtgc gcggcaaact cggcaatatc gatctggtgt
     6061 ttttgccgcg gcacggcaga ggccatcgct ggctgcccac ggaagtcaat tttcgcgcga
     6121 atattttcgc catgaagaag ttaggcgtcg agcggattat ctcggtcagc gcggtgggca
     6181 gcctgcgcgc ggaaatcgct cccggccatt tggtcgtgcc cgatcaattc atcgatcgca
     6241 ccagccaacg gccgagtaca ttttttggca agggactggc cgcccatgtc agcctggccg
     6301 atccattttg ccaagagctc tccgcggttc tggtgcaatc ggccgagcag gcgggcgcca
     6361 ccgtgcatcg gggcggaacc tacctgtgca tcgaagggcc gcaattttcg acccgggcag
     6421 aatcgcatct gtaccgtagt tggggcgcgc atgtgattgg catgaccaat ttgcaagaag
     6481 ccaagctggc ccgcgaagcg gagatctgtt tcggcacatt ggccttggcc accgacttcg
     6541 attgttggaa cgagcaggcc ggcgatgtcg aaatcgagcg ggtcttggca gtattgcata
     6601 ataatgttgc gttagcgcgg cgcaccatcg gcgctgcgct tgccgctctg gcagagccgc
     6661 gcctttgcag ctgtgcgagc gcgctaaagg atgctattat taccgatcga cgggcgattg
     6721 ctaaaaaact gcggcaagat ttgcggccca ttatagggaa atatctatga gtgtattggt
     6781 tgtcggcacg gttgctttcg attccattga ggcgccggcg ggttccgtcg agagaattct
     6841 cggcggctcg gcgtcctatt tcgccctggg cgcgagttat tttgcggcgg tgcgcatggt
     6901 tggcgttatc ggccaggatt tcccccagga tcacttggac ctgtttaccc agcgcggcat
     6961 cgatatcgca ggcatcaagc gcgaccaggg cgatactttt cactggcgcg gccgctatca
     7021 tgaagacatc aatcagcgcg ataccattga actgcacttg aatgttctag cgggtttcaa
     7081 accgaaacta ccggaaagtt atcgcgatgc ggaattggtt tttctcggca atatcgatcc
     7141 agtcatacag atggatgtcg tcgaacagat ccgccacatg aagctcctgg t
//
LOCUS       DATIRS010000428         4201 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1704659, whole genome shotgun sequence.
ACCESSION   DATIRS010000428 DATIRS010000000
VERSION     DATIRS010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4201
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1704659"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..189)
                     /locus_tag="VLM90_05390"
     CDS             complement(<1..189)
                     /locus_tag="VLM90_05390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12426.1"
                     /translation="MSPIRPIGPILLALALFASNAAAAEPANFYQGKTVRIIVGLAAG
                     GGYDLYARTLARHLGKHIP"
     gene            complement(230..1255)
                     /locus_tag="VLM90_05395"
     CDS             complement(230..1255)
                     /locus_tag="VLM90_05395"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ12427.1"
                     /translation="MLRIAILVSTLLFNLLLGVAGRAAAQSDFYQGKTIRFIVGFTAG
                     GGYDAYTRAIARHMGKHIPGNPTMVVDNMPGAGSMISANYTFKVAKPDGLTIGHFIGG
                     LFLQQLLGKPGIEFDSAKFEYVGVPAQDNFIFGVHKSTGITDMNGWLATKQVVKFGGV
                     ANGSGSDDIPNILKATLGLPIQLISGYKGTADVRLAFNSGEVQGISNSWESTKSTWRK
                     EIDSGDMRVILQATLKSHPDFAKLPVAYEMAKGDEAKRLIATVLRVHGPTVRPYALPP
                     RTPKERVQILRKAFMDTMKDPEFLAEAKKANLDINPDDGATLESNVKEILKLEPALIA
                     KLKEILK"
     gene            complement(1290..2315)
                     /locus_tag="VLM90_05400"
     CDS             complement(1290..2315)
                     /locus_tag="VLM90_05400"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ12428.1"
                     /translation="MKLPIALVAAALLSRAIVPGSVAAQENFYQGKTIRMIVGTSAGG
                     GFDTYTRTIARHFGKHVPGQSAIVVENMPGAGHLIGANHMYKVARPDGLTIGHFHGGW
                     FLYQLFKRPGIEFDATKYEFIGSPIKESRACAFTKASGITSVERWLASKTPVKVGGIG
                     GGAPDDMARMLAATTALPIQLVSGYKGTSEIRLAAESGELAGSCWTWDSIRSTWSKAI
                     QSGEAIVVLQAVAKPHPELPNVPLAQSLAKTDEARQLLQAGVQDPADFYRPYVAPPRT
                     PKPRVDTLRQAFAATMKDAEFLADAKKANLDIEPITGQEMEKLVAGIFKLNPALAAKL
                     KNILNPS"
     gene            2562..3413
                     /locus_tag="VLM90_05405"
     CDS             2562..3413
                     /locus_tag="VLM90_05405"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSQ12429.1"
                     /translation="MIHTTGLAATHMECRNLQESLKVLTELLAFEKLSEKPGEATLKH
                     PNTHWQLVVHEAGPDAPAKPMHNHWGVRVVSPEEVDRAYDYLLAHKADYKLGAIGKPT
                     WSHGSYSCYFVEPGSNGWEIECYEAFNRKQATAERFGAVKMAHWDQLLSEERFPGRGY
                     IPQGFTHGTLVATDLETSKNFYTNVLGLDAHRFSDNVIYIKHPTTKTFIVCALRQNAP
                     VFSPNFRNTLTVASKDAVKDVYRQFSEGGEALGVRALFPLQETGAAASFCFRDPGTNC
                     WEIATAN"
     gene            3529..>4201
                     /locus_tag="VLM90_05410"
     CDS             3529..>4201
                     /locus_tag="VLM90_05410"
                     /inference="COORDINATES: protein motif:HMM:NF013253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy-acid oxidizing protein"
                     /protein_id="HSQ12430.1"
                     /translation="MTDKPLEQMGLRDLRGIMRQQAPAEAWTHFNGAAETKSTFHRNP
                     RAFQQYLFRQKIFHDVSEPDISVELFGQKLPIPAITAPVGSFSLIGKDAERQVAEGTD
                     RAGAMMLVSQAAHFNLHDWRSADKSPLVFMAYMNRGREEVEEYAKTAQDLGFAAVGIT
                     MDTVKPVKIGDEVPLSTKDGKPRKGHKSTPKDIEWMKQRVKLPVVVKGIMGAADAKIA
                     VDSGAD"
BASE COUNT          842 a         1125 c         1328 g          906 t
ORIGIN      
        1 tgggatatgt ttgccgaggt gacgcgccag cgtgcgggcg tagaggtcgt agccgccgcc
       61 agcggcgagg ccgacgatga tgcggaccgt cttgccctgg tagaagttgg ctggctcagc
      121 cgcggcagcg ttgctggcaa aaagcgccag cgctaacaag atcggaccga tgggacgaat
      181 tgggctcata ttttctctct tctagagatt ctcgttaaga acagccagcc tatttcaaaa
      241 tttctttcag cttggcaatc agcgccggtt cgagcttcaa gatttctttg acgttacttt
      301 cgagcgtcgc gccgtcgtcc gggttgatat caaggttggc tttcttggcc tcggcgagga
      361 actcgggatc tttcatcgtg tccatgaagg ctttgcggag gatctgcacg cgctccttgg
      421 gggtgcgcgg cggcagcgca taggggcgca ccgtcgggcc gtggacgcgc agtaccgtgg
      481 caatcagccg tttggcttcg tcgcccttgg ccatttcgta tgcgactgga agtttggcaa
      541 agtccgggtg agatttgagc gtagcctgga gaatgactct catgtcgccg ctgtcgattt
      601 ccttgcgcca ggtggatttt gtcgactccc aggagttgct gattccttgc acctcgccgc
      661 tgttaaacgc caagcgaaca tcggcggtgc ctttataccc ggagattaat tgaatcggca
      721 gacccaatgt cgccttgaga atattcggga tatcgtcact gccggagccg ttggcgacac
      781 caccgaattt taccacttgc ttggtggcga gccagccgtt catgtcggtg atgccggtgg
      841 atttatgcac gccgaatatg aaattgtcct gcgccggcac gcccacgtac tcgaattttg
      901 ccgaatcgaa ttcgatgccc ggtttgccaa gcagctgttg caggaacaat ccgccgataa
      961 agtggccgat ggtgagaccg tcgggcttgg cgactttgaa cgtgtagttc gccgagatca
     1021 tgctgccggc gcccggcatg ttgtcgacga ccatggtcgg gttgccggga atatgtttgc
     1081 ccatatggcg ggcgatggcg cgagtatatg cgtcgtagcc gccgccggcg gtaaagccga
     1141 cgatgaagcg aatggttttg ccctggtaaa agtcgctttg ggcggcggcg cggccggcaa
     1201 cgccaagcag aaggttgaat aacaacgtgg aaaccaagat tgcaattctt agcatgatgg
     1261 cctttcctga ttgtattgac gacaacgaat taactgggat tcaaaatatt tttgagcttc
     1321 gccgcaagag cagggttgag cttgaaaatc ccggcgacga gtttttccat ttcctggccg
     1381 gtgatcggtt cgatgtcgag gttggctttc ttggcgtcgg cgaggaactc cgcatccttc
     1441 atcgttgcgg cgaatgcctg gcgcaacgtg tcgacccgtg gtttgggtgt ccgcggcggg
     1501 gcgacgtagg ggcggtagaa gtcggcggga tcttggacgc cggcctgaag cagttggcgc
     1561 gcttcatccg tcttagccag gctttgcgcc agcgggacgt tgggcagttc cggatgcggt
     1621 ttggcgacgg cctggagcac gacgatggcc tcaccggatt gaatcgcttt gctccaggtc
     1681 gagcgaatcg agtcccaagt ccagcaactg ccggcgagtt cgccgctctc ggcggccaga
     1741 cgaatctccg aggtgccttt gtagccgctg accagttgga tcggcagcgc cgtggtggcg
     1801 gcgagcatgc gcgccatgtc gtccggcgcg ccgccgccga tgccgccgac ttttaccggt
     1861 gtctttgacg ccaaccatct ttccacgctg gtgatgccgc tggctttggt aaacgcacag
     1921 gcgcggcttt ctttgatcgg cgagccgatg aattcgtatt tcgtcgcgtc gaactcgatg
     1981 cccggccgtt tgaacagttg atagagaaac cagccgccgt ggaaatggcc gatggtcagg
     2041 ccgtcgggtc tggcgacttt gtacatatgg ttggcgccga tcagatggcc ggcgccgggc
     2101 atattttcga cgacgatggc agactgcccc ggcacatgct tgccgaagtg gcgcgcgatg
     2161 gtccgcgtat aagtatcgaa gccgccgccg gccgaagtgc cgacgatcat gcggatggtt
     2221 ttgccctggt agaaattttc ttgggcagcg acgctgccgg gaacgatggc gcggcttaac
     2281 agcgcggctg cgacaagcgc gattggtaat ttcatggaga gtcagctcct tccgtcgaag
     2341 gctcggcgaa tgtaaggaaa aggcaagttt gtgtcaaggc aaattggcga tgattccgct
     2401 tgatgttggc ccggtgctgc gagggggaga gctttttcac tgcgctcgat atgacagaat
     2461 tcaaaccgcc gtcagtttga caccccggtg ctgcggctgt aaattttccc gagaagatct
     2521 gcatctgttc aaacgagctc ggtcttttag ggagatatag aatgatccac accaccggac
     2581 tggcggcgac gcatatggaa tgccgaaact tacaagaatc attgaaagtt ctgaccgagc
     2641 tgttggcctt cgagaagctg tcggaaaaac ccggcgaggc gacgctcaag catcccaaca
     2701 cccattggca gttggtggtg cacgaggccg ggccggacgc gccggcgaag ccgatgcaca
     2761 atcattgggg cgtgcgcgtg gtcagtccgg aagaagtgga ccgggcctac gattatttac
     2821 tggcgcacaa agccgactac aaactcggcg ccatcggcaa gccgacctgg agtcatgggt
     2881 cgtattcctg ctatttcgtc gaacccggca gcaacggctg ggagatcgag tgctacgagg
     2941 cgttcaatcg caagcaggcg accgcggaac gcttcggcgc ggtgaagatg gcgcactggg
     3001 atcagttgct gtcggaggag cgctttccag gacgcggcta cataccccaa gggtttaccc
     3061 atggcacttt ggttgccact gacctggaga cgagcaagaa tttttacacc aatgtcttgg
     3121 gccttgacgc gcaccggttt agcgataatg tgatttacat caagcatccg acgacgaaga
     3181 cttttatcgt ctgcgcgctg cgccagaatg ccccggtgtt ctcgcccaac tttcgcaata
     3241 ccctgacggt ggcgtcgaag gacgcggtga aagatgtcta tcggcaattc agcgagggcg
     3301 gcgaagcgtt gggtgtgcgc gcgctgtttc cgctccagga aaccggcgcg gcggcgtcct
     3361 tttgttttcg cgatccgggg acgaattgct gggagattgc gacggcgaat tgagtttttg
     3421 cagattactt ccgcagggcg accggccgga cgccccaaca gcagtttgat caccggctaa
     3481 cgactccaac cagtttgtat ttcacttcac tcataaggcg ggcaatttat gactgacaaa
     3541 ccactggaac agatgggact gcgcgatctg cgcgggatca tgcggcagca agcgccggcg
     3601 gaggcgtgga cgcatttcaa cggcgcggct gaaaccaagt cgacctttca ccgcaacccg
     3661 cgggcgtttc aacaatattt atttcgccag aaaattttcc acgatgtcag cgagccggat
     3721 atttccgtcg agctgttcgg ccagaagctg ccgattccgg cgatcacggc gccggtggga
     3781 agtttcagct tgatcggcaa agatgctgag cgccaagtgg ccgaaggcac ggatcgcgcg
     3841 ggcgcgatga tgttggtcag tcaggccgcg catttcaacc tgcacgactg gcgcagtgcc
     3901 gacaagtcgc cgctggtgtt catggcctac atgaaccgcg gccgggaaga ggtcgaagag
     3961 tacgccaaga cggcgcagga cctgggcttc gccgctgtcg gcatcaccat ggacacggtc
     4021 aagccggtga agatcggcga tgaggtgccg ttgtcgacca aggacggcaa accgcgcaag
     4081 ggccacaagt cgacgcccaa agacatcgag tggatgaagc agagggttaa actgccggtg
     4141 gtggtcaaag gcatcatggg cgcggctgac gccaagattg cagtcgactc cggcgccgat
     4201 g
//
LOCUS       DATIRS010000429         2773 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_130632, whole genome shotgun sequence.
ACCESSION   DATIRS010000429 DATIRS010000000
VERSION     DATIRS010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2773
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130632"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..528
                     /locus_tag="VLM90_05415"
     CDS             <1..528
                     /locus_tag="VLM90_05415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12431.1"
                     /translation="YKVKPATHGKKYKAHLFGSGPILREALRAQVVLAEQFDVSADVW
                     SATSYKLLRGDALRTQRWNMLHPTAVPKKSYLESILEKEDGVFIAVSDYMKMVPDQIA
                     PWIPGGLTTLGTDGFGRSDTRANLRRFFEVDAELTTLATLYALHQKEAFPARVVEAAI
                     RKLGIDPEKPFPFYL"
     gene            564..1889
                     /locus_tag="VLM90_05420"
     CDS             564..1889
                     /locus_tag="VLM90_05420"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase family
                     protein"
                     /protein_id="HSQ12432.1"
                     /translation="MDVKLPQLAEGVEGGTVVSILVAEGQVIEKNQPFMELETQKAVG
                     SIPAPSAGVVTKIHVKQGMEVNIGQTLISIETAAISAPAAAPVAQASPSVAANPISSP
                     TPPGEQSSSSVQAAAVAPVDDYRYQSSSGMAPPAAPAIRKIARELDLDLTRVRGSEAG
                     GRINMGDLRAYVRKLQDLAFQNTARAAPAAAAAPAARLTETIDFAKWGAIRREKMSPL
                     RRTVSRRMVESWTSIPKINQFADADITALLALRKKYAPSYEKNGTHLTLTSLLLFILG
                     RTLKNHPRANASIDEVALEIVYKDYCHIGVAVDSEGGLIVPVLHDADKKDLLQISSDL
                     HALTEKTRQRKISIEELQGGSFTISNQGSIGGGHFTPIIYAPQVAILGIGQGQAKPVA
                     IDGKIAIRTILPLCLAYDHRVLDGADAVRFLKDIITGLEAFAEADIKVK"
     gene            1901..>2773
                     /locus_tag="VLM90_05425"
     CDS             1901..>2773
                     /locus_tag="VLM90_05425"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSQ12433.1"
                     /translation="MEPITTEILVLGAGPGGYAAAFYAADKGKQATLVEQSPRLGGIC
                     LNVGCIPSKALLHATEILRESKESAARGIAFGAAQIDLDKLRAWKIGILDKLGQGIKT
                     LAEHRKVKVIHGRGHFEDSQTLRVETSDGQKFVRYEKAIIAVGSKPALPNAFDLGNPR
                     VMTSTGALEIPDIPENLLVVGGGYIGMELGTVYAALGSKVVVLEALPSILAGVDADLA
                     RPVMRAAQKAFKEIRLNTKVLKMATASKQIKVTIEMDKQPREELYDRVLVSVGRTPNL
                     ADLGLENTKVTKDDK"
BASE COUNT          642 a          861 c          771 g          499 t
ORIGIN      
        1 tacaaagtga aaccggcgac ccatggcaaa aaatacaaag cgcatctgtt cggcagcggc
       61 ccgatactgc gcgaagcatt gcgcgcccag gtagtcctgg ccgagcaatt cgatgtcagc
      121 gccgatgtct ggagcgcgac cagctacaag ttattgcgtg gcgacgccct gcgcacccaa
      181 cgttggaaca tgctccatcc cacggcggtg ccgaagaaat cctatctcga atccatatta
      241 gagaaggaag atggcgtgtt tatcgcggtt tccgattata tgaagatggt gccggatcaa
      301 atcgcgccgt ggattcccgg cggattgacg accctcggca ccgacggttt cggccgcagc
      361 gatacccgtg ccaacctaag acgatttttt gaagtggacg ccgaactgac gacccttgcg
      421 acactctacg cattgcacca gaaagaggcg tttccggcgc gagtcgttga agcagcgatc
      481 cgcaagctcg gcatcgaccc ggaaaaacca ttcccgttct atctataagc catctgaaaa
      541 cttaacagca gcgacatttc tccatggatg taaaacttcc ccaactcgct gaaggcgtag
      601 agggcggcac ggtggtcagc atcttggtcg ccgaaggcca agtgatcgag aaaaaccagc
      661 ctttcatgga acttgaaacc caaaaggccg tgggctccat cccggcgccg agcgccggcg
      721 tggtcactaa gattcatgtc aagcaaggca tggaagttaa tatcggccag acgctgatct
      781 ccatcgagac cgcagccatc agcgctccag ctgcagcccc cgtggcgcaa gcttcgccaa
      841 gcgtggcggc gaacccaatc agctctccga cgccacccgg tgaacaatct tcaagctcgg
      901 tgcaagcggc agccgtcgcg cccgttgatg actaccgcta ccaatcgagt agcggcatgg
      961 cgccgcccgc ggcaccggcg atccgcaaaa tcgcccgtga acttgacctc gacttgacca
     1021 gggttcgcgg tagcgaagcc ggcgggcgca tcaatatggg cgatctcaga gcctatgttc
     1081 gcaagctcca agatctcgcc tttcaaaaca cagcgcgggc ggctccggcg gccgcggcgg
     1141 cgcctgcagc gaggctaacg gagaccattg acttcgccaa gtggggagcg atccggcgcg
     1201 aaaagatgtc gccgctgcgg cgcacggtga gccggcgcat ggtggagtcc tggacgtcga
     1261 ttccgaaaat caatcagttt gccgacgccg atatcactgc gctgctcgcc ctgcgcaaaa
     1321 agtacgcgcc ctcctatgag aaaaacggca cgcatctaac cttgacatcg cttctcctgt
     1381 tcattcttgg ccgcacgcta aaaaaccatc cgcgcgccaa tgcgagcatc gacgaagtag
     1441 cgctggagat cgtttacaaa gactactgcc acatcggcgt ggccgtcgac agcgaaggcg
     1501 gcttgatcgt gccggtgctg cacgatgccg acaaaaaaga cttgctccag atttcctcgg
     1561 acttgcacgc gctgacggag aaaacccgcc agcgcaagat ttccatcgaa gaactgcaag
     1621 gcggcagctt caccatctcc aaccaaggaa gcatcggcgg cggccacttc acgccgatca
     1681 tttatgcgcc gcaggtggcg attttgggca tcggccaggg ccaagctaag ccggtcgcca
     1741 tcgacggcaa gatcgccatc cggaccattc tgccgctctg cttagcctac gatcatcgcg
     1801 tgctcgacgg cgccgacgcc gtgcgctttc tcaaagacat catcaccggc ctcgaagcct
     1861 tcgctgaagc cgacatcaaa gtgaaatagc tcgactgatt atggaaccga ttacgacgga
     1921 aattctggtc ctgggcgccg gtccaggcgg ctacgccgcc gccttctacg cggcggacaa
     1981 aggcaagcag gctactctag ttgagcaaag cccgcggctc ggcggtatct gcctcaacgt
     2041 cggttgcatt ccgtcgaaag ccttgctcca cgccaccgaa atcctccgcg agagcaaaga
     2101 gtcggcggcc cgcggcatcg ccttcggcgc tgcgcagatc gatctcgata aactgcgcgc
     2161 ttggaaaatt ggcattctcg acaagctcgg ccaagggatc aagacgctcg ccgagcaccg
     2221 caaagtcaag gtcatccatg gccgcggcca cttcgaagac tcgcagacgc tcagggtcga
     2281 aacttccgac gggcaaaagt tcgtccgtta tgaaaaggcg atcatcgccg tgggttccaa
     2341 gccggccctg cccaacgctt tcgatctcgg caatcctcga gtaatgacat ccaccggagc
     2401 cttggagatc cccgatattc cggaaaacct gctggtcgtc ggcggcggct atatcggcat
     2461 ggagctcggc acggtctatg cggccctcgg cagcaaggtc gtcgtgctgg aagccttacc
     2521 gtcgattctt gccggcgtcg atgctgacct cgcccgcccg gtgatgcgcg cggcacagaa
     2581 ggcctttaaa gaaatccgcc tcaataccaa agttttgaag atggccaccg caagtaaaca
     2641 gatcaaagtc acgatcgaaa tggataaaca gccgcgcgaa gagctctacg atcgcgtact
     2701 cgtcagcgtt ggccgcacgc ccaatctcgc cgaccttggt ctggaaaaca ccaaggtcac
     2761 caaggacgat aag
//
LOCUS       DATIRS010000430         2095 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_917840, whole genome shotgun sequence.
ACCESSION   DATIRS010000430 DATIRS010000000
VERSION     DATIRS010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2095)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2095)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2095
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_917840"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1518
                     /locus_tag="VLM90_05430"
     CDS             <1..1518
                     /locus_tag="VLM90_05430"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSQ12434.1"
                     /translation="SPRELVIALASAVGVALFAALHPAVEALLISPLENARQAVWRPV
                     FVAKKSWSIRLGMVCFAVAPLLILLAPQLSGAVRQFSTGVIGMLIFLLGLAFFAPLMV
                     RWVAQLLWRSALVLPGISWVETRLAADSLRRNPLRSGITVATMIISLAAIFTIAAFVN
                     SVRGSLLAWVDQMVTADIIISSGARTAGPRNVSLHEEPAAGLRALAGVKIVDLYRLVR
                     ANYQGRPIVVESFSAVESARVRTLPMAQGDGARALREMGEAKGAIISESFQTRFAKQL
                     GDSFELVTPSGPVTFKVLGIYIDYSSDIGSVLIDRALYKKYWRDELVDAFDLWLEPGV
                     DMAALIEKIKAGYGEKYQLFISTHRELKAAVLRIMEQSFVVNYAVEIVALVVAIFSVI
                     NTLLASILDRSREIGVLRAIGATQAQVRRIIVMEAGWMGLIGGLLGLFAGSVMAYHHV
                     VYNTKLLTGWTFQYFYPYDVAGLVVAATVLLCLLAGYGPAKKAAATPVVTAIGYE"
     gene            complement(1788..>2095)
                     /locus_tag="VLM90_05435"
     CDS             complement(1788..>2095)
                     /locus_tag="VLM90_05435"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HSQ12435.1"
                     /translation="LEEEAIEILQKNAEWMKANPKARVEVEGHCDDVGSAEYNLALGA
                     KRAQSAKDFLISQGIAAERLVTISYGKEAPACFDLAEDCRVRNRRARFVMFTEVPTS"
BASE COUNT          360 a          609 c          656 g          470 t
ORIGIN      
        1 tcgccgcgcg agttggtcat cgcgctggcc agcgccgtcg gtgtcgcctt gttcgccgcc
       61 ttgcatccgg ccgtcgaagc gctgcttatc agcccgctgg aaaatgcccg gcaagcggtt
      121 tggcgtcccg tgtttgtcgc caagaagtcc tggtccatcc ggctcggcat ggtctgcttt
      181 gcggttgcgc cgctgctgat tcttctggcg ccccagctga gcggtgcggt gcggcagttc
      241 agcaccggcg tcatcggcat gttgatattt ctcctcggtc tggctttctt cgcgccgctc
      301 atggttcgtt gggtggctca actcttgtgg cgctcggcgc tggttttgcc cggaatttcc
      361 tgggtggaga cgcgcttggc cgcggatagt ctgcggcgca atccgttacg ttcgggaatc
      421 acggtggcaa ccatgatcat cagcctggcg gcgattttca ccatcgccgc cttcgtcaat
      481 agcgtgcgcg gctcgctgct cgcctgggtc gatcagatgg tgacggccga catcatcatc
      541 agctccggcg cgcgcaccgc cggaccgcgc aatgtttcgc tgcacgaaga gccggcggcg
      601 gggctgcgcg ctttagcggg ggtgaaaatc gtcgatctct atcgcctggt gcgcgctaac
      661 tatcaaggcc ggccgattgt cgtcgagtct ttttccgctg tcgaatcggc gcgcgtgcgc
      721 accttgccga tggcccaagg cgacggcgcc cgcgcattgc gcgaaatggg cgaagccaag
      781 ggcgcgatca tcagcgagag ctttcagacg cgattcgcca agcagctggg cgacagcttc
      841 gaactggtca caccttccgg accggtcact ttcaaagtgc tggggattta catcgattat
      901 tcttccgaca tcggcagcgt gctgatcgat cgcgcgctct acaagaagta ttggcgcgac
      961 gaactggtcg atgccttcga tctgtggctg gagccgggcg tggacatggc ggcgctgata
     1021 gaaaaaatca aagccggcta cggcgagaaa tatcagcttt ttatcagcac ccaccgcgag
     1081 ctcaaggccg ccgtgctgcg catcatggag caatccttcg tcgtcaacta cgccgtcgaa
     1141 atcgtcgctc tagtagtggc gatcttcagc gtcatcaaca cactgctggc ttcgatcctc
     1201 gaccgcagcc gcgagatcgg cgtgctgcgc gccatcggcg cgacccaagc gcaagtgcgc
     1261 cgcatcatcg tcatggaagc gggctggatg ggactgatcg gcgggttact tggcttgttc
     1321 gccggcagcg tgatggccta tcaccatgtg gtttacaaca ccaagctgct caccggctgg
     1381 acgtttcaat acttttaccc ctacgatgtc gccggcctgg tggtcgccgc cacggtgctg
     1441 ctctgtctcc tggctggcta cggaccggcg aagaaagcgg cggcgacgcc ggtggtgacg
     1501 gcgatcggct atgagtgaat gtcggaatgg attggcccca cccttcggct ggctcaggcc
     1561 gatcggtaac gcaaagggcg ggaaaattta aagaggaaat ccgaatgtag gggcgtatgg
     1621 catacgccca ggggcgggga gcgtattcgc gtgacctgaa cgttttctca gcctgcgtcg
     1681 attttcatag catgccggca gtcggagggc gggtttcaaa acaatccctg ggattgcaat
     1741 ttcactttgt gaactttgcg ttctttgcgg ccaaatatcc gagtatctta cgaggttggc
     1801 acttcggtga acatgacgaa gcgggcgcgg cggttgcgca cgcggcagtc ttcggcgaga
     1861 tcaaagcagg cgggagcttc tttgccgtag ctgatggtca ccaagcgctc ggcggcgatg
     1921 ccttggctga tgagaaagtc cttggcggat tgggcgcgtt tggcgccgag ggcgagatta
     1981 tattccgccg aaccgacatc gtcgcagtgg ccttcgactt cgacgcgcgc tttcggattg
     2041 gctttcatcc actcggcatt tttctgcaaa atctcaatcg cttcttcctc gagct
//
LOCUS       DATIRS010000431         1607 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1606132, whole genome shotgun sequence.
ACCESSION   DATIRS010000431 DATIRS010000000
VERSION     DATIRS010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1607
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1606132"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..792)
                     /locus_tag="VLM90_05440"
     CDS             complement(<1..792)
                     /locus_tag="VLM90_05440"
                     /inference="COORDINATES: protein motif:HMM:NF012379.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HSQ12436.1"
                     /translation="MASTIVSVKKAFTLSVGSEITLRGWVRSRRDSKGITFIELNDGS
                     RFKSMQLVVEAGAVPEEILKQVTTGSGISANGALVESPAKGQAVELKVASIHVYGTAD
                     PATYPLQKKGHTLEFLREISHLRVRSNTFGAAFRVRNALTHAIHSFFQERDFLYVQTP
                     IITTSDCEGAGQMFGVTTLNLQQPPRAPDGKVDWQQDFFAKPAYLTVSGQLEGEIFAS
                     AFSKVYTFGPTFRAENSNTPRHLAEFWMIEPEMAFYELEDNMRLAE"
     gene            complement(877..>1607)
                     /locus_tag="VLM90_05445"
     CDS             complement(877..>1607)
                     /locus_tag="VLM90_05445"
                     /inference="COORDINATES: protein motif:HMM:NF013252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12437.1"
                     /translation="QELMRRFRRLHDIETTAGDIPLSLYLFDCLYLNGRSLIDESYDA
                     RWQELSELSGGKHLASRKITTEKNQAEAFLSESISAGHEGLMAKAPRSTYMPGNRGKL
                     WFKVKPAETIDCVILAADRGSGRRRGWLSNYHLAVGDNAGGYAPVGKTFKGLTDKQFI
                     EMTARLEALQLDGDAYTVSVRPEVVVEVTYNEIQRSPQYSSGFALRFARITNIREDKA
                     AAQITTLAELQSLYERQFLTKSRR"
BASE COUNT          311 a          435 c          488 g          373 t
ORIGIN      
        1 ttcggccagt cgcatgttgt cttcgagctc gtaaaaggcc atctccggct cgatcatcca
       61 gaactcggcc agatggcgcg gcgtgttgct attctcggcg cgaaaggtcg gaccgaaggt
      121 ataaactttg gaaaacgccg aagcgaagat ctcgccttcg agctggccgc tcacagtgag
      181 gtaggcgggc ttggcgaaga agtcctgctg ccagtcgact ttgccgtcgg gcgcgcgcgg
      241 cggctgctgt aagttgagtg tggttacgcc gaacatttgc ccggcgcctt cgcagtccga
      301 ggtcgtgatg atcggcgtct gcacatagag aaaatcgcgc tcctgaaaaa agctgtgaat
      361 cgcgtgggtg agcgcgttgc gcacgcgaaa ggccgcgccg aaggtgttgc tgcgcacgcg
      421 caggtgtgag atctcgcgca gaaactccag cgtgtgcccc tttttttgca gcgggtaggt
      481 cgctggatcg gctgtgccgt agacatgaat cgacgcgacc ttgagctcta cggcttgtcc
      541 cttggctgga gattcaacca aggctccgtt ggccgagatg ccgcttccgg tggtgacctg
      601 ttttagaatt tcttcgggca cggcgccggc ttcgaccacc agttgcatgc tcttgaagcg
      661 cgagccatcg ttaagctcga taaaagtgat gcctttggag tcgcgccgcg agcgcaccca
      721 tccgcgcaac gtaatctcac tgccaaccga aagggtgaat gcttttttga ctgaaacgat
      781 tgttgacgcc ataagcgcca agtatgggat aaatccgctt ggtgtcaacc atctgagatc
      841 gccatcgcat cggttaacgt ggcgacgttg ccggacctag cgccggcttt tggtgagaaa
      901 ctgtcgttcg tagagcgact gaagctcggc gagggtcgtg atctgtgccg ctgctttgtc
      961 ttcgcggata ttcgtgatgc gcgcgaaacg tagggcgaat ccagagctgt actgcgggct
     1021 gcgctggatt tcattgtacg tgacttcgac gacaacctcc ggccgtacgc tcactgtgta
     1081 agcgtcgcca tccaactgga gtgcctcgag cctggcggtc atctcgataa attgtttgtc
     1141 tgtaagaccc ttgaacgttt tgccgaccgg agcgtagcca ccggcgttgt cgccgaccgc
     1201 aagatgatag ttcgaaagcc agccgcgccg tcttcctgag ccgcggtcgg cggccaaaat
     1261 cacacaatca atggtttctg ccggctttac tttaaaccag agtttgccgc gattgccggg
     1321 catgtacgtg ctccgcgggg ccttggccat cagtccttca tggcccgcag agatggattc
     1381 gctcagaaaa gcttcggctt ggtttttctc tgtcgtaatt tttcgcgatg ccaaatgttt
     1441 gccgccggag agttcgctga gctcttgcca gcgcgcgtca taggattcat cgatgagcga
     1501 ccggccgttt aggtagaggc aatcgaatag gtaaagcgaa agcggaatgt cgcccgccgt
     1561 cgtttcgatg tcgtgtaagc gtctgaagcg gcgcatgagc tcctgga
//
LOCUS       DATIRS010000432         3795 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_229604, whole genome shotgun sequence.
ACCESSION   DATIRS010000432 DATIRS010000000
VERSION     DATIRS010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3795
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_229604"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..516
                     /locus_tag="VLM90_05450"
     CDS             <1..516
                     /locus_tag="VLM90_05450"
                     /inference="COORDINATES: protein motif:HMM:NF012273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione binding-like protein"
                     /protein_id="HSQ12438.1"
                     /translation="GGGGPLSIFESGAMLEYLADKCGQFLPREVRGRAEVMQWLFWQM
                     GGLGPMLGQNHHFRGYSAEKIAYAIERYTKETERLYGVLDERLEDREFVAGAYSIADI
                     ACYPWIVLHERQGQDLNDFANLKRWFETIQKRPAVVRAYEIAKTINVGSAGVTEEGKK
                     ILFGQGRRKKA"
     gene            586..1581
                     /locus_tag="VLM90_05455"
     CDS             586..1581
                     /locus_tag="VLM90_05455"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12439.1"
                     /translation="MKVRLLAIGCFCWVMAVAVHAAEPPVKFLFAYGAIGGNAMPLWI
                     AKEQGIFRKYNLDPQLIFIIAGRAMQSMIAGDIQFGLLGASHVTNAVTAGGDMTMLLG
                     MEDKLNYFLNVRPGIKSAEDLKGKKVGIGTPSGSLAMATYVGLDHLGLVPRRDRITLL
                     NTGSTPERMSSLFAGGIDAAFFNPEVEQVVLQQGFPMLFDLGKANVPYQASGLVTSRK
                     YLRSHPLIVENLAKAVVEGVAFVQNPANKKAVVDSIARNLRLDRPDRLESAYRAIAEV
                     IPRKPCPSLAGIASVLKLMAQHGINPKAAELKPEDIADMSLCKKLEDSGFFARLQ"
     gene            2085..2771
                     /locus_tag="VLM90_05460"
     CDS             2085..2771
                     /locus_tag="VLM90_05460"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HSQ12440.1"
                     /translation="MSGDQPLTGATGFFFERDSRLFLVTSRHVVIEEASNHRPDQLTI
                     ELHVDEQNIGNVIQWSIPLYGGNQALWRQCVDSGGSVDVVAVEIHRPALPETVLLAPF
                     TPEHLVAELDQIEVGTPVLIVGFPLGFHDNLHHLPVVRHAGIASAFGIRFQGQGYFLT
                     DARMHRGTSGAPVVTRVTTDRSGRGDLAWTLLGVHSARMDVANRDIHEVERLNLNCAW
                     YADVLLTLTA"
     gene            complement(2846..3748)
                     /locus_tag="VLM90_05465"
     CDS             complement(2846..3748)
                     /locus_tag="VLM90_05465"
                     /inference="COORDINATES: protein motif:HMM:NF013961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HSQ12441.1"
                     /translation="MSQNGARHYRVEHHTAYLYSEPVMLSHQQLHLTPRALDYQSIQA
                     HEVLIKPAPAQQRELIDAFGNPVTEIAIESAHKTLDIIARTTVAVTARRVNVLVQTPP
                     WETVRDALAYRAAWHPEPAILDATQFLFESPYARVKRTLKAYAGDCFEPGRPILAAAA
                     ALMAKIHGEFKFDAAATNVTTPVMEFFAQKRGVCQDFTHLMISCLRSTGLAARYVSGY
                     LLTRPAPGKPRRVGADVSHAWVSLCIPSVGWVDLDPTNNIMPSLEHITLGWGRDFADV
                     TPLRGVINGGGEPTLEVKVTVEPV"
BASE COUNT          782 a         1026 c         1165 g          822 t
ORIGIN      
        1 ggcggtggcg ggcctctgag tattttcgaa tccggggcga tgctcgaata tctcgcggac
       61 aagtgcggtc aatttttgcc gcgcgaagtg cgcgggcgcg ccgaggtcat gcaatggctc
      121 ttctggcaaa tgggtggcct cgggccgatg ctcggccaga atcatcattt tcgcggttat
      181 tccgccgaga aaatcgctta cgccatcgag cgctatacca aagaaactga gcggctctac
      241 ggcgtgctcg atgagcggct ggaagatcgt gaattcgtcg ccggcgctta ttccatcgcc
      301 gacatcgcct gttatccttg gatcgttttg catgaacggc aggggcagga cttgaacgac
      361 ttcgccaact tgaagcgctg gtttgagacg attcaaaaac gtcccgcggt ggtgcgcgcc
      421 tacgagatcg ccaagacgat caacgtcggc tcggcgggcg tgaccgagga aggcaagaaa
      481 attttgtttg gccagggtcg gcgcaagaaa gcttgaaccg aaccggttca agacgttcaa
      541 caagttcagg tcgttcaatg cgttgcggat tcggaggcag gtcgtatgaa ggtacgattg
      601 ctggcgatcg gttgtttttg ctgggtcatg gcggtggcgg tccatgcggc ggagccgccg
      661 gttaaatttc ttttcgctta cggcgccatc ggcggcaatg cgatgccgct gtggattgcc
      721 aaggagcaag ggatctttcg caagtacaat ctcgatccgc agttgatttt catcatcgcc
      781 ggccgggcga tgcagtcgat gatcgccggc gacattcagt tcggcttgct cggcgcctct
      841 catgtgacca atgccgttac cgcgggcggc gatatgacga tgctgctcgg catggaagac
      901 aaactgaatt actttttgaa cgtgcgtccg ggcatcaaga gcgccgaaga tctgaagggc
      961 aagaaggttg gcatcggcac accttctgga tcgctggcga tggccaccta cgttggcctg
     1021 gaccatctgg gattggtgcc gcggcgcgac cgcattacgc tgttgaatac cggcagcact
     1081 cccgagcgca tgagttcgct gtttgccggc ggtatcgacg cggcgttttt caatcctgag
     1141 gtcgagcagg tcgtgcttca gcagggtttt ccaatgttgt tcgatcttgg caaggcgaac
     1201 gtgccgtacc aggcatcggg tttggtgacc tcccgtaaat atttgcgcag tcatccgctg
     1261 atcgtggaaa atctcgccaa ggcggtcgtc gagggtgtgg cgttcgtgca aaatccggcg
     1321 aataaaaagg ccgtcgtcga tagcatcgcc cgcaatttgc ggctcgatcg gcctgaccgc
     1381 ttggagagcg cctatcgcgc catcgcagaa gttattccgc gcaaaccatg cccgagcctt
     1441 gcgggtatcg cctcggtgtt aaaactgatg gcccaacacg gcatcaaccc gaaagccgcg
     1501 gagctcaagc cggaagatat cgccgacatg agtctgtgca aaaaattaga agatagcggc
     1561 ttcttcgcgc ggctacagtg agttttacca atcaccacta aggacctgac acggtgaagc
     1621 cgcaaccaaa tgggcaagag ttttaaccac gaagtgaatc atgatcttac gcacgcccac
     1681 agataatgaa aataccggaa gccattcctt agactcgtca tgccggcgca ggccggcatc
     1741 caggggcggg agggggatgg ataccggcct gtgccggtat gacggaacag agagtcgtta
     1801 tcgatacgca gattatcgct gcacgtgtat tttcgaagga tctcacgaag gacacgaagg
     1861 gttcggaaaa ttattaatcc gaacttcgtg ctcttcgtgt ccttcgtggt gagattggat
     1921 tgcttcattg agcacggcaa cttaggagtg ccggtacgga aaatttgcgc aagccacgca
     1981 atctttgagc tattgcagtg caaagggcgc aaaaaggaat cggaattctt cgggagcgca
     2041 acttgattga atctttgcta ttggcggtaa ctcgggtttc gacgatgtcg ggtgaccagc
     2101 cgctcaccgg cgccaccgga ttttttttcg agcgcgatag ccggttattt ttagtgacca
     2161 gccgacacgt cgtgatagag gaagccagca atcatcggcc ggaccagctt accatcgagc
     2221 ttcacgtcga tgagcaaaac atcgggaatg tgattcagtg gtcgattccg ctttatggag
     2281 gaaaccaagc gctgtggcgc caatgcgtcg attccggcgg cagtgttgac gtcgtcgctg
     2341 tggaaattca ccgaccggct ctccctgaga cggtccttct cgcgccgttt acacccgagc
     2401 atctggtcgc tgagttggat cagatcgaag tgggcactcc ggtgctgatc gtcggcttcc
     2461 cattggggtt tcacgacaat ttgcatcacc tgccggtggt gcgccacgcg ggcatcgcct
     2521 cggcgttcgg tatccgtttt cagggacagg gctattttct gaccgatgcc aggatgcatc
     2581 gcggcaccag cggcgcgccg gtagtcaccc gcgttaccac tgaccgttcc ggtcgcggcg
     2641 acctcgcctg gacgctgctt ggcgtccact cggcgcgcat ggacgtggcc aaccgcgata
     2701 ttcatgaggt cgagcgtttg aatctcaact gcgcctggta tgcggatgtt ctgctgacgt
     2761 taaccgcata aagcggatta atggtgtagc caagcggcga ccagtgaagc tgcgcgcccc
     2821 gagttggacg caatgaattg cccccctaga cgggctcaac ggtcaccttg acttccaagg
     2881 ttggctcgcc gccgccgttg atcacgccgc gcaaaggcgt cacgtcggcg aagtcgcggc
     2941 cccatccgag cgtaatatgc tccaaggacg gcataatatt gttggtcggg tcgaggtcaa
     3001 cccagccgac gctagggatg catagagaca cccacgcgtg ggaaacgtcg gcgccgacgc
     3061 gtcgcggctt gccgggcgcc gggcgcgtga gcaagtaccc gctcacgtaa cgcgccgcca
     3121 gcccggttga acgcaaacac gagatcatca aatgggtaaa gtcttggcag acaccgcgct
     3181 tctgtgcgaa aaattccatc accggcgtcg tgacgttggt cgctgccgca tcgaatttaa
     3241 actcgccgtg aattttcgcc atcagtgccg ccgcggccgc taaaatcggc cggcccggtt
     3301 caaaacaatc gccggcatag gccttgagag tgcgtttcac tcgcgcgtag ggggattcaa
     3361 aaagaaactg tgtggcatcg aggatcgccg gctcgggatg ccaggcggcg cggtaagcga
     3421 gtgcgtcgcg aacggtttcc cagggaggcg tttgcaccag aacgttcacg cgtcgtgcgg
     3481 tcactgcgac ggtggttctg gcgataatat ccaaggtctt gtgcgccgat tcgatggcga
     3541 tctcagttac cgggttgccg aaggcgtcga tcaattcgcg ctgttgcgcc ggcgcaggtt
     3601 tgatgaggac ttcatgggcc tggatcgatt ggtagtccaa ggcccgcggc gtcaagtgga
     3661 gctgctggtg cgacagcatc accggttccg agtaaaggta ggcggtgtgg tgttcgaccc
     3721 gataatggcg cgcgccgttt tgactcatgc tgccacgctc gtctgcgggt gctcaccggc
     3781 gtgaataaag aacct
//
LOCUS       DATIRS010000433         1554 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1409862, whole genome shotgun sequence.
ACCESSION   DATIRS010000433 DATIRS010000000
VERSION     DATIRS010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1554
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1409862"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1379
                     /locus_tag="VLM90_05470"
     CDS             <1..1379
                     /locus_tag="VLM90_05470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12442.1"
                     /translation="IASSTKSRGEGIGFAGVGIKLGLLVCEEVFTETRRGKTHIASSW
                     HLATRNRAPWKWVAPLKLIAERGTAVRLQVENPLSPLLDPGFLAVTLRRHFQPLLDPS
                     FDEFLRGHYPSGVAIEVDGRRLDKQRWSAPRAAPLEIRLMRKRKAAASGYLIRADHPL
                     PEERQGLSISTYGKVIRRGWDWLGLTPAAADCVGGIIEVPELAACLTLNKGDFIRAGA
                     RGATYLGFRKAIQEAVGRQLALWGDGRSGAEQAPPREVRPLQRDLVQVLEDLALDFPL
                     LGSLVEQRAGGQRRLPLGIRGAGSDGHGFVAASLTAAAESEPTENPPSTAAASTDSSP
                     ATASAVVHEANDGYGSDGSSIQLPSKSIVRRPAHYGLDIQFADRPDDIELGRLTESTV
                     WVNRAHPAYRRAQASHSVGYHIALAVAMALAPLAVEAPHQHGFVSAFLSRWGEALDKP
                     SARREHKR"
BASE COUNT          306 a          509 c          471 g          268 t
ORIGIN      
        1 acatcgcgtc gagcaccaag agccgcggcg aaggcatcgg ttttgccggc gtcggcatca
       61 agttggggct tttggtctgt gaggaagtgt tcaccgaaac ccggcggggc aaaactcata
      121 ttgccagctc atggcatctg gcgacgcgca atcgcgcgcc gtggaaatgg gtggcccccc
      181 tgaagctgat cgccgaacgc ggcacggcgg tgcgcttgca agtcgagaat ccattatcgc
      241 cgctgctcga tccgggcttt ttagcggtga ccctgcggcg ccattttcaa cccctgctgg
      301 accccagctt cgacgagttt ttgcgcggcc attatcccag tggcgtcgcc atcgaggtcg
      361 acggccgccg gctggacaaa cagcgctgga gcgcgccgcg cgccgcgcct ttggaaattc
      421 gcctcatgcg caaacgcaaa gccgccgctt cgggttacct gattcgcgcc gatcatcctt
      481 tacccgagga gcgccagggt ttgtcgatca gcacctatgg gaaagtcatc cggcgcggct
      541 gggactggct gggtctgacg ccggcggcgg ccgattgcgt cggcggcatc atcgaagtgc
      601 cggagctcgc cgcctgcctg accctcaaca agggcgactt catccgcgcc ggcgcccgcg
      661 gcgcgaccta tttaggattt cgcaaagcga tccaagaagc ggtcggcagg caactcgccc
      721 tctggggcga tggccgcagc ggcgccgaac aagcgccacc acgggaagtg cggccgctcc
      781 agcgcgacct cgtgcaagta ttggaagatc tggcgctgga cttccccctg ctcggctccc
      841 tggtcgagca aagagccggc ggacaaagac gattgccgct aggcatacgc ggcgccggca
      901 gcgatggcca tggtttcgtc gcggcatcac tcaccgcggc ggcggagagc gaaccaaccg
      961 agaacccgcc atccaccgcg gcggcttcaa cagattcaag cccggccact gcttcagcag
     1021 tggtgcatga agctaacgat ggctacggca gcgacggcag ctcaattcaa ttaccgagta
     1081 agtccatcgt ccgccgtcca gcgcattacg gcttggacat tcaattcgcc gacaggcccg
     1141 acgacatcga actgggccgc ttgaccgaat cgaccgtctg ggtcaaccgc gcccacccgg
     1201 cttaccggcg cgcccaagcc tcgcattcgg tcggttacca catcgcgtta gcggtcgcga
     1261 tggcgttggc gccgcttgcc gtcgaggcgc cgcaccagca tggatttgtc agcgcgttcc
     1321 tgtcgcgctg gggcgaagcc ctggacaagc caagcgcgcg ccgcgagcac aaacgttaga
     1381 ctgcataaga aaacaaatcg tcaccaccaa ggccacagcg cgctatgccg caaccaaatg
     1441 gaaaagagta ttcaccacga agtacttcat gagcttacgc tcgcctacag agcatgaaaa
     1501 taccggaatc cccctctcgg ggttcattcc ttagattcgt catgccggcg cagg
//
LOCUS       DATIRS010000434         2104 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_524248, whole genome shotgun sequence.
ACCESSION   DATIRS010000434 DATIRS010000000
VERSION     DATIRS010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2104
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_524248"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(237..1190)
                     /locus_tag="VLM90_05475"
     CDS             complement(237..1190)
                     /locus_tag="VLM90_05475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12443.1"
                     /translation="MAQNIELSLLLADYHRTRPMLNGEIKAQGVEFTLHRAETGVACM
                     RPVYEEYDIAEMSLSWYVMARSRNEPVVALPIFPLRMQIHPYIFCSPASGIERPEDLK
                     GKKIGMDQYRLTVGLWARGILQEHYGVRPEDCHWFTNEPESPDAGFQPPANVEITCAQ
                     ESTEAMLLRGELDALIPPNIVPSFRKQDPRIRRVFKDIRATVNDYFHHTRIFPITHTL
                     VVREELFEKQPWLVASLLEAFNEAEELCRKSYAYAKRSAFPSAVLILEEEEEVFGKNP
                     WQHGLTPENQVVLEKFVQYANEQGYIPNRPALSELFAPIGN"
     gene            complement(1202..>2104)
                     /locus_tag="VLM90_05480"
     CDS             complement(1202..>2104)
                     /locus_tag="VLM90_05480"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12444.1"
                     /translation="ASLKSVNFASNTPTLSGTLPLVVAQEFGFFAAEGLDVKTVLIRG
                     GPTAMAALVGGGVDYTLVAGVAAVRAIAQNAPMTIISGMQPYMDYTLLGAKGIAGVND
                     LKGKVVGVTGPGGIAEFATVEGLAKKGLVRDRDYKILYGVGNSPARAQALETGKIQAS
                     PFSFLERLELERKGYPTLFDIGSVMPGFPFVVIVTSKQKIDTDPEGIVSMLRAIKRGL
                     DFLAGNHEKVAAVVIKKNNFGDPATVRKVIAQFAEVYSVAITKEDIEALIAATRIEAE
                     AKKLGGSDKFFTRQFLTKALGQSR"
BASE COUNT          410 a          584 c          640 g          470 t
ORIGIN      
        1 gaaggcgggt gacgtgctgg tgcagcgcgg cacgatccat aactggatca accgtggcac
       61 cgagccttgc gtgatcgctt tcatcctgat cgacgccaag ccggtcgagg tgggcgggaa
      121 gattttgcat gcgaaaggtt agtggaagtc agaggcgcaa agggcgcaaa acaatctgag
      181 gtaggggcgt attgcatacg ccctggggtg gtgctgtgtt gggttccctc tcgacgctag
      241 tttccgattg gcgcgaacaa ctcgctcagc gccggccggt tcgggatgta gccctgctcg
      301 ttggcgtatt ggacgaattt ttccagcacc acttggttct cgggcgttaa gccgtgctgc
      361 cagggattct tgccgaaaac ttcttcctct tcttccaaga taagcaccgc cgacggaaat
      421 gccgagcgct tggcataggc gtaggacttg cggcaaagtt cttcagcttc attaaaggct
      481 tcgagcaggc tggccaccag ccaaggctgt ttttcgaaca gctcctcgcg caccaccagc
      541 gtgtgagtga tcgggaagat acgggtgtga tgaaaataat cattgacggt ggcgcgaatg
      601 tctttgaaaa cgcggcgaat gcgcgggtct tgtttgcgaa acgacggcac tatgttgggc
      661 gggatcaagg cgtcaagctc gccgcgcaaa agcatcgctt cggtggactc ctgggcgcag
      721 gtgatctcga cattcgccgg cggttgaaag ccggcgtccg gcgactcggg ttcgttggta
      781 aaccaatggc aatcttccgg ccgcacaccg taatgttctt gcaggatgcc gcgcgcccac
      841 aggccgacgg tcaagcggta ttggtccatg ccgatctttt tgcccttcaa gtcctccggg
      901 cgttcgatgc cggaggccgg cgagcaaaaa atatatgggt ggatctgcat gcgcaacgga
      961 aagatcggca gggcgacgac cggctcgttg cggctgcgcg ccatgacgta ccatgacaga
     1021 gacatctcgg cgatgtcgta ttcttcgtag accggccgca tgcacgcgac gccggtctcg
     1081 gcgcggtgca gcgtgaattc aacaccttgt gctttgatct cgccgttcaa catgggccgc
     1141 gtgcggtgat agtcggcgag gagaagactc agttcgatgt tttgtgccat gagagttcct
     1201 ttcaacggct ttggccgagg gccttggtga gaaattgccg ggtaaagaat ttgtccgatc
     1261 cgccgagctt tttcgcttcc gcttcgatgc gcgtggcggc gatcagcgct tcgatgtctt
     1321 ctttggtgat tgccaccgaa tagacctcgg caaactgcgc gatgactttg cgcaccgtgg
     1381 ccgggtcgcc gaagttgttc ttcttgatca ccacggcggc gactttttca tgattgccgg
     1441 cgaggaagtc caagccgcgc ttgatcgcgc gcagcatcga aacgattcct tctggatcgg
     1501 tgtcgatttt ttgtttactg gtaactatca ccacgaacgg aaatcccggc atgacgctgc
     1561 cgatatcgaa aagagtggga tagcctttcc tttccagttc caatctttct aagaaagaaa
     1621 atggcgaggc ctggatcttg ccggtttcta aagcttgggc gcgcgccgga ctgttgccga
     1681 cgccgtaaag gattttataa tcgcggtcgc gcaccaagcc ttttttggcc agcccttcga
     1741 ccgtggcgaa ctcggcgatg ccgcccggac cggtgacgcc gacgactttg cccttgaggt
     1801 cgttgacgcc ggcgatgccc ttggcgccga gtaacgtgta gtccatgtaa ggttgcatgc
     1861 cgctgatgat cgtcatcggc gcgttttgcg cgatcgcccg caccgctgcc acgccggcca
     1921 ctagcgtgta atcgacgccg ccgccaacca aagccgccat cgccgtcggc ccgccgcgaa
     1981 tcaggacggt tttgacatcc aaaccttcgg cggcgaagaa accaaactcc tgggcgacga
     2041 ccagcggcaa tgtgccgctc aacgtcggtg tgttcgacgc gaagttgacc gattttaacg
     2101 acgc
//
LOCUS       DATIRS010000435         3384 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1705059, whole genome shotgun sequence.
ACCESSION   DATIRS010000435 DATIRS010000000
VERSION     DATIRS010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3384)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3384)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3384
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1705059"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            124..939
                     /gene="proC"
                     /locus_tag="VLM90_05485"
     CDS             124..939
                     /gene="proC"
                     /locus_tag="VLM90_05485"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004735 - pyrroline-5-carboxylate
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HSQ12445.1"
                     /translation="MLQEKIGIVGAGKIGSAIARGVIGAGIATKENVMASDVSDALRQ
                     AIDLELGVKTTSDNRALCDFADIIILAVKPQIVDPVAKEIAKKLGKAKLLVSVAAGVP
                     LARIESNLENGARVVRVMPNIPCVVGAGAAGFAGGSHATGADLEKVGAILNSFGIGVP
                     VEEKYLDAVTGLSGSGPAYVFLFMEALADGGVQVGLARDVALKLAMQTVYGAAKMALE
                     SNKHLGELKDEVTSPGGTTIAGLYSMEQKGFHGTVMDAVVSATKRSQELGKGS"
     gene            1481..3205
                     /gene="bamA"
                     /locus_tag="VLM90_05490"
     CDS             1481..3205
                     /gene="bamA"
                     /locus_tag="VLM90_05490"
                     /inference="COORDINATES: protein motif:HMM:TIGR03303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HSQ12446.1"
                     /translation="MEQITFFGNSALPDDELRDVTVTKERPWYRFWEERPAFDLVTFE
                     NDLERLRRYYEARGYYGAAVTYDLDVDAEREAVTVRFDIREGRPVLISEIDVEVTGDG
                     PIQSPPSLPESLPIKRDDVFTESGYQKAEQILRAALLDKGYAHVKTERKAEIDLDERR
                     VRIRYSIQPGPEAKFGETEIKGLETVEPEIVSRELTYHAGETYSLEKVVESREKLLAL
                     DLFGTVKVGPVETPGTPVVVPMAVEVGEKPHREIRIGLGYGTEDQFRTQFEWRHLNWL
                     GGGRRLSVLAKYSSIVVSGAINFVQPHFLTPRTQGVMTLSHDQEDEESYLRNVTRFAP
                     RLDHRFSSTLTGFIGFRAEYDKLNDVAAATVQSLGTVRREGFLFGPTAGLVWNTSDDP
                     FNPKKGQVISLAVNQAGAIWGGVFSFYKITAEAKKYLDIGWQTVFASRLKLGLADAIG
                     ADENLPIFERYYAGGEKSVRGYGRRRLGPVTASNDPLGGLSLIEGSLELRRPIWKELY
                     GAVFIDFGQISTRRFDLPVRNLQFSSGFGLSYATPVGPLRLDVGFPFKPPRGDHPWQV
                     HFSIGAYF"
BASE COUNT          695 a          891 c         1042 g          756 t
ORIGIN      
        1 agaaggcctc cggcattaac acccggaggc cttttttatt tatgcgccgc ccatgggctt
       61 tgaagttccg ctgccgacga tttatgctgg cgggcggctg ctagtcggcc aaggaggtct
      121 ccagtgctgc aggaaaagat cggtattgtc ggcgcgggca aaatcggctc cgcgatcgcg
      181 cgcggcgtga taggggctgg gatcgcgacc aaagagaatg ttatggccag cgatgtcagc
      241 gacgctttgc gccaagccat cgacctggag cttggcgtga aaacaacgtc cgataaccgg
      301 gcgctttgcg atttcgccga tatcatcatc ctcgccgtca aacctcagat cgtcgatccg
      361 gtggccaagg agatcgccaa aaagctcggc aaagcaaaac tcctggtctc ggtagccgcg
      421 ggtgtgccct tggcgcgtat cgagtctaat ttggaaaacg gcgcgcgggt ggtgcgcgtg
      481 atgcccaata tcccctgcgt cgtcggcgcc ggcgcggccg gctttgccgg cggcagccat
      541 gcgaccggcg cggatttgga aaaagtcggc gccatcctca acagcttcgg catcggcgtg
      601 ccggtggaag agaaatactt ggacgccgtc accggcttga gcggcagcgg cccggcctac
      661 gtttttcttt tcatggaagc gctcgccgac ggcggcgtgc aagttgggtt ggctcgagat
      721 gttgcactca agctcgccat gcagacagtc tatggcgccg ccaaaatggc gctggaaagc
      781 aacaagcatt tgggtgaatt aaaagatgaa gtcacttcgc ccggcgggac gacgatcgcc
      841 ggactttact ccatggaaca aaaaggtttt cacggcacgg tgatggacgc ggtggtcagc
      901 gcgacgaaac gctcgcagga gttggggaag gggtcgtaag aaggtttcga gttctgagtt
      961 tcgggtttag tgttgaaaaa ctgcgcgtct acgacggcta gtctttttcc ctgaggagta
     1021 tcggcagcgc aaattatttt ttcgtccagc gctccgctga ttttctttca attccacgcg
     1081 caaccgtcgc cctcggtgcg cgttacgttg atttcgattc ttgcggggct tttcgctacc
     1141 actcgtgaat cggctcgcgg cgtttcgcga aggtccaatt tgcggagcgt gcgatagttg
     1201 tcggcgcccg ccgccgcgtt tgaaattgcg gcctggccgt ttcgcctggc gaaccaaaac
     1261 ttcgtcgaat tacccagcgc cagccggtat gctgctcctg ctgagtatac gtctgcaaat
     1321 ttcacggcgg cgtattacgt aagccgattc tgaatgttaa aaatacttag tgagtcgacc
     1381 ctgcgaaatc gtcattctaa cgttaatcgg attttttgcc ctttgccgaa gtgcagatgc
     1441 agtcccgatc gatgccctgg atcctgctcg ccagtggcga gtggagcaaa tcacgttttt
     1501 cggcaactcg gcgcttccag acgacgaact cagggacgtc accgtcacaa aagaacgacc
     1561 ttggtatcgc ttttgggagg agcggccggc gttcgatctg gtcacttttg agaatgatct
     1621 ggagcgattg cggcgatact acgaggcgcg cggatattac ggcgcagcgg tgacctacga
     1681 tctagacgtc gacgcggaac gggaggccgt cactgtgcgc ttcgatattc gcgaagggcg
     1741 gccggtcttg atctccgaaa tcgacgttga agtgaccggc gacgggccga ttcaaagtcc
     1801 gccgtcgctg cccgaaagct tgccgatcaa acgagacgat gttttcacgg agtcggggta
     1861 ccagaaggcc gaacagattt tgcgcgcggc gttattggac aaagggtacg cgcacgtcaa
     1921 aaccgagcgc aaggcggaaa tcgacctgga cgaacgtcgc gtgcggattc gctattcgat
     1981 ccagccggga cctgaggcga agtttggtga aaccgagatc aagggtttgg aaacggttga
     2041 gccggaaatc gtctcaaggg aattgaccta ccatgccggc gaaacttatt cgctggaaaa
     2101 agtcgtcgag tcgcgcgaaa aactcctggc gttggatctc ttcggaacgg tcaaagtcgg
     2161 tccggtagag acgccgggca cgccagtggt ggttccgatg gccgtggagg tgggcgaaaa
     2221 gccccatcgc gaaatcagaa ttggcttggg atacggcacg gaggatcaat ttcgcacgca
     2281 atttgaatgg cgccacctaa attggctcgg cggcggcagg cgtttatcgg ttctcgctaa
     2341 gtattcttcg atcgtggttt ctggcgcgat caattttgtt cagcctcatt tcttgacgcc
     2401 tcggacgcaa ggagtcatga cgcttagtca cgaccaggaa gacgaagaaa gttatctgcg
     2461 caatgtaacc cgcttcgcgc cgcgcttgga tcatcgattt tcttcgacgc tgaccggctt
     2521 tatcggcttc cgggcggaat acgataagct gaacgatgtc gctgcggcta cggttcaaag
     2581 cctgggcacg gtgcgacgcg aaggttttct cttcgggccg accgcgggtc tggtatggaa
     2641 cacttcggac gatccattta acccgaagaa gggtcaggtg atttcgctgg ccgttaatca
     2701 ggccggcgcg atctggggcg gtgttttcag tttctataaa ataacggcag aggcgaaaaa
     2761 atacctcgat atcggctggc agacggtttt tgccagccgg ttgaagctgg gtttggccga
     2821 cgccatcggc gccgatgaga atttgccgat cttcgaacgc tattacgccg gcggggaaaa
     2881 gagcgtgcgc ggttacgggc gacggcggct cggtccggtg acggcgagca atgatccgct
     2941 gggtgggctc agtcttatcg aagggtcgct tgaactgcgc cggccgatct ggaaagaatt
     3001 atacggagct gtgttcatcg acttcggtca aatttccacg cgacgattcg acctgccggt
     3061 gaggaattta caattttcca gcggctttgg attgagctat gcgacgccgg tcggaccatt
     3121 gcgcttggac gtgggttttc ccttcaaacc gccgcgcggc gaccatccct ggcaagttca
     3181 tttcagtatt ggagcttact tttagcccat gcagaaactc cggctcataa gaaggttcgt
     3241 gctcgccgtc gccgtgctgc tggttggcgc cattatcggc gcggccgtgt atacgcgcac
     3301 tgaatatttc caacgctggg tgcgtcaaga agcggtcggc gccgtcaatg gcgcgatccg
     3361 cggctcgatc agcatcgaac ggtt
//
LOCUS       DATIRS010000436         2781 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1900772, whole genome shotgun sequence.
ACCESSION   DATIRS010000436 DATIRS010000000
VERSION     DATIRS010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2781
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1900772"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..247
                     /locus_tag="VLM90_05495"
     CDS             <1..247
                     /locus_tag="VLM90_05495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12447.1"
                     /translation="EGFKSAEDVADSELAELLDIEGISKEKAEAVHKSAVVYVAEKRA
                     KEAELAANPPPAPEPEVAVAADADGAPGAPAAPEEPT"
     gene            255..524
                     /locus_tag="VLM90_05500"
     CDS             255..524
                     /locus_tag="VLM90_05500"
                     /inference="COORDINATES: protein motif:HMM:NF016204.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlxR family protein"
                     /protein_id="HSQ12448.1"
                     /translation="MAKPGDAPQRTCLGCGARDRKELLLRLIVNAAGQLEVAAQGQRG
                     GYLHRRVECWSGFVGRKSHFRAFRVEVAKPAKEKLLRELKDSLGA"
     gene            540..>2781
                     /gene="infB"
                     /locus_tag="VLM90_05505"
     CDS             540..>2781
                     /gene="infB"
                     /locus_tag="VLM90_05505"
                     /inference="COORDINATES: protein motif:HMM:TIGR00487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HSQ12449.1"
                     /translation="MGKTRVHLLAKELGIETKDLIAQLDKLGMRGRKAQSAMEDDEVA
                     RVRSALVAQEKPHVHIGEEKIIARVVKTEEEGQGTVESRETVVERRVRTNVIRRRTSR
                     VEVAPPEGAVEAIVATPVVEPEIFAEPAASAEPAAPEPTVVEEMPVEAAAETPAPTEE
                     PAWVEPVVEAGTAEVTPEIIEVKPEPVAVPPVVAARPAPEPETMEALQHTAPRGARIL
                     GRIDLKQQTMRVEPAPTPVLRRPAPGAVAAGAAGTAPVEPGAGDDKPKAGRHKKRVVK
                     KQDVIESREKEVRGGRGIPRKKRVMPGKEVRRTEITVPRASKRVIKISEVISVGDLSR
                     EMGVKAGEVIKKLMGMGMMATINQVLDADTATLIASEFEFQVENVAFNADSALEETPV
                     GAEEEEAALQARPPVVTIMGHVDHGKTSLLDAIRSTHVTAQEHGGITQHIGAYHVQVD
                     GRSVTFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTIEAINHARAAEVPII
                     VAVNKMDRPDANLEKVKKGLSEYGLAAEDWGGDTVFAPVSAKTQEGIPHLLEMLQLQA
                     DILELKANPEKLARGTIVEAKLDRGRGPVATVLVQEGTLHVGDAFVCGVFYGKVRAMI
                     DDHGQKVDVAPPSFPVEILGLQGVPLAGDSFVAVADEAKARQVAEFRHSKQRETELVK
                     SSKVSLDELYSQIKAGDVKELRVVLKADVQGSVEAVSEALTRMSTGDVKLKVLHGSVG
                     GITESDI"
BASE COUNT          621 a          771 c          907 g          482 t
ORIGIN      
        1 agaaggattt aagtcggccg aagacgtagc tgacagcgag ttagcggagt tgctcgatat
       61 cgaaggcatt agcaaagaaa aagccgaagc ggtgcacaaa tcggcggttg tatatgtagc
      121 ggagaagcgc gccaaggagg cggaattggc ggccaatccg ccgcctgcgc cggaacctga
      181 agtggctgtg gctgccgacg ccgatggggc gcccggagcc cctgcggcgc cggaagagcc
      241 gacttgagag tccggtggca aagccgggag atgcgccgca gcgaacctgt ttaggctgtg
      301 gtgcgcgtga tcgcaaagag ctgctgctcc gcctaattgt caacgccgct ggccaactgg
      361 aagtcgccgc ccaagggcag cgcggtggtt atttacatcg gcgggtggag tgttggagcg
      421 gttttgtcgg ccgtaagagc cacttccggg cgtttcgcgt tgaagtcgcc aagccggcca
      481 aggaaaagtt actgcgcgaa ctgaaggaca gtctcggggc ttaaacgacg gggagtaaaa
      541 tgggaaagac gagagttcat ctgctggcaa aagaattggg catcgagacc aaggatttga
      601 tcgcccagct cgacaagttg gggatgcgcg gtcggaaggc ccaaagcgcg atggaagatg
      661 atgaagtcgc gcgcgtgcgc tctgcgttag tagcccagga aaaaccgcat gtccatatcg
      721 gcgaagaaaa aatcatcgct cgtgtggtca agaccgagga agaaggtcag ggcaccgtcg
      781 agtcgcgcga gaccgttgtc gaacgccggg tccgtaccaa tgtcattcgt cgccgtacca
      841 gccgggttga ggtcgcgcca cccgagggcg ctgttgaagc aattgtcgct acgcccgttg
      901 ttgagcctga aatcttcgcg gaacctgcgg ctagcgctga gccggccgcc cccgagccaa
      961 ctgttgtaga ggaaatgccg gtggaagccg ctgctgaaac accggcaccg accgaagaac
     1021 ccgcgtgggt tgaaccggtc gtcgaagctg gcacagccga agtaaccccg gaaattatcg
     1081 aagttaaacc ggagccggtg gcggtgccgc cggttgtcgc agcccgaccg gcccctgaac
     1141 ccgaaactat ggaagccttg cagcacaccg cgccgcgcgg cgcgcgcatc cttggccgca
     1201 tcgatctgaa acagcagaca atgcgcgttg aacccgcgcc cacgccggta ttgcgccggc
     1261 ccgcgcctgg tgccgtggcc gccggtgctg cgggcactgc gccggtggaa ccgggtgccg
     1321 gcgatgacaa gccgaaggcc gggcgacata aaaaacgtgt cgtcaagaaa caggatgtca
     1381 tcgagtcgcg cgagaaagaa gtgcgcggcg gccgtggcat tccacgcaag aaacgggtca
     1441 tgcccggcaa agaggtgcgc cgcacagaaa tcaccgtgcc gcgggcaagc aagcgcgtca
     1501 taaaaatctc cgaagtgatc tcggtgggcg atctctcccg tgagatgggc gtcaaggccg
     1561 gcgaggtgat caagaagctg atgggcatgg gcatgatggc caccatcaac caggtgctcg
     1621 acgccgatac cgcgacactg atcgcctccg agtttgaatt tcaagtcgaa aacgtcgcct
     1681 tcaatgccga cagcgctctt gaagaaacgc cggtcggtgc cgaggaagag gaagccgctt
     1741 tgcaagcgcg gccgccggtg gtgacgatca tgggccatgt cgatcatggc aaaacgtcgt
     1801 tgctcgacgc cattcgcagt acccatgtga cggcccaaga gcatggcggg attacccaac
     1861 atatcggcgc ctatcatgtg caagtggatg gccgcagcgt gacctttctc gataccccag
     1921 gccacgaagc gtttaccgcc atgcgcgcac gcggcgctaa agtcaccgat atcgtcgtgt
     1981 tggtggtggc cgccgacgat ggcgtcatgc cgcaaaccat cgaagcgatc aaccatgcgc
     2041 gtgccgccga agtgccgatc atcgtcgcgg tcaacaagat ggaccggccc gatgccaatt
     2101 tggaaaaagt aaaaaaaggt ctgtccgagt atggcttggc tgccgaggat tggggtggcg
     2161 acacggtgtt cgcgccggta tcggcgaaga ctcaagaagg cattccgcac ctgttggaaa
     2221 tgttgcaact gcaagccgat attttggaac tcaaagccaa tccggagaaa ctggcgcgcg
     2281 gcaccatcgt tgaagccaaa cttgatcgcg gccgcggacc ggtggcgacc gttctggttc
     2341 aggaagggac gttgcacgtc ggcgacgcct ttgtctgcgg ggttttctac ggcaaagtgc
     2401 gcgccatgat cgacgaccat ggccagaaag tcgatgtcgc gccgccttcg ttcccagtgg
     2461 agattctggg tttgcagggc gtgccgctgg cgggcgattc gtttgtcgcg gtcgccgatg
     2521 aagctaaagc gcgccaagtc gccgagttcc gccacagcaa gcaacgcgag accgaattgg
     2581 tcaagtcgag caaagtttcc ttggacgagc tctacagtca gatcaaagcc ggcgatgtca
     2641 aggaactcag agtggtgctc aaggccgacg tgcagggttc cgtcgaggcg gtgtctgaag
     2701 ctcttacgcg catgtccact ggcgacgtca aactcaaagt cctgcacggt tcggtgggcg
     2761 gtattactga aagcgatatc c
//
LOCUS       DATIRS010000437         1626 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1606451, whole genome shotgun sequence.
ACCESSION   DATIRS010000437 DATIRS010000000
VERSION     DATIRS010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1626)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1626)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1626
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1606451"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..402)
                     /locus_tag="VLM90_05510"
     CDS             complement(<1..402)
                     /locus_tag="VLM90_05510"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSQ12450.1"
                     /translation="MAGPVLELRNLHKEIPRKDREPFAIFKNLNLSLRDGEFVSVVGP
                     SGCGKTTMLRVINGLMPSTRGEIFIDGKSANELDHELVMGFVFQGASLLPWRTSLKNV
                     LLGLEGRGKNTEEAEKIARKFLDLVGLSGFEN"
     gene            complement(405..1187)
                     /locus_tag="VLM90_05515"
     CDS             complement(405..1187)
                     /locus_tag="VLM90_05515"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSQ12451.1"
                     /translation="MNERSDKLHSNLFKIGSIVAGLALWHILSDYILKDPTFLVSPVV
                     VLRAAYEMLFVTGELYPHLFASSWIFFYGFALAIVTGVSLGFLMALSPVVRDYVNPWM
                     TTLYSTPRIAFAPILLLWFGIGGGAKVAIVFLGCLFPILINSYYGMRVVNREYVELAR
                     SFRLTSWALFMKILLPASVPFILAGIRLSIGRGLTSVAIAEWFGATEGLGYLVFFAGQ
                     TLNIPTLFVGVAAFAVLGIVGFEIVRRIENYATPWRTQSQGG"
     gene            complement(1215..>1626)
                     /locus_tag="VLM90_05520"
     CDS             complement(1215..>1626)
                     /locus_tag="VLM90_05520"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSQ12452.1"
                     /translation="SKVIVVFKITAVAIILNTAAGIKNLDPVWLELAKSLRLSGWETT
                     FKIRVPGALPYIITGMRLGVGRALLGVIVAELMASNAGLGYLLRDSSETWDSPKLFVT
                     VFLLAAMGLVSFNLIKRFERRVAPWRQSAEWSTE"
BASE COUNT          394 a          469 c          471 g          292 t
ORIGIN      
        1 gttctcgaag ccggataggc cgaccagatc caaaaattta cgcgcgatct tttccgcttc
       61 ttcggtattt ttaccgcgcc cctccaggcc gagcaggacg ttcttcaagc tcgtgcgcca
      121 gggcaacaac gacgcgcctt gaaaaacaaa ccccatcacc agttcgtggt ccagttcgtt
      181 ggcggacttg ccgtctatga aaatctcgcc gcgggtgctc ggcatcaagc cgttgatcac
      241 ccgaagcatg gtggttttgc cacagccgct cggcccgacg acgctgacga attcgccgtc
      301 gcgcagcgat aaattgaggt ttttgaagat ggcaaatggc tcgcggtcct tgcgcgggat
      361 ttccttatgc aaattcctaa gttccaaaac cggcccggcc atccttaccc tccctgcgat
      421 tgagttctcc acggcgtcgc gtagttttcg atccgccgaa cgatttcaaa gcccacgatc
      481 cccagcaccg cgaaggcggc gacaccgacg aacagggtcg ggatattcaa agtctggccg
      541 gcgaagaaga ccaaatagcc gagtccctcc gtggcgccga accactcggc gatggcgacg
      601 ctagtcaggc cgcggccgat ggacagccgg atgccggcga ggataaaagg cacggacgcg
      661 ggtaaaagaa ttttcatgaa gagcgcccag gaagtcagac gaaatgagcg ggcgagctcg
      721 acgtattcgc ggttgaccac gcgcatgccg taataggaat tgatcaggat gggaaacagg
      781 cagccaagaa agacgatggc cactttggcg ccgccgccga tgccgaacca aaggagcagg
      841 ataggcgcga atgcgatgcg cggtgtgcta tagagcgtcg tcatccacgg gttgacgtag
      901 tctcgcacca cgggactgag cgccatcaga aagccgagcg acacacccgt gacgatggcc
      961 agggcgaaac cataaaagaa tatccatgaa ctcgcgaaca ggtgcgggta aagctcgccg
     1021 gtaacaaaaa gcatttcata ggcggctcgg agcaccacca ccggggatac gagaaacgtc
     1081 ggatccttta gaatatagtc cgacaggata tgccacagag ccaggcccgc cacgatggag
     1141 ccgatcttga acagatttga atggagcttg tcgcttcgtt cattcatggg ttggaaacgc
     1201 tttcgttgcc gggactactc ggtggaccat tccgcgctct ggcgccaggg cgccacgcgg
     1261 cgctcgaagc gtttgatcag attgaaactc accagcccca tcgcggcgag cagaaataca
     1321 gtgacgaaaa gcttcgggct gtcccaggtc tccgacgagt cgcgcagcag gtatcccaag
     1381 ccggcgttgg acgccatcag ttcggcgacg atgacgccca aaagcgcccg gccgacgccg
     1441 aggcgcatac cggtgatgat atagggaagc gcgccgggga cgcggatttt aaaagtcgtc
     1501 tcccagccgc tcaaacgaag cgacttcgca agctcgagcc aaacaggatc gagattctta
     1561 atgcccgcgg cggtattaag aatgatcgcc acggcggtga ttttaaagac cacaatcact
     1621 ttcgac
//
LOCUS       DATIRS010000438         1907 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_918186, whole genome shotgun sequence.
ACCESSION   DATIRS010000438 DATIRS010000000
VERSION     DATIRS010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1907)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1907)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1907
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_918186"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..269)
                     /locus_tag="VLM90_05525"
     CDS             complement(<1..269)
                     /locus_tag="VLM90_05525"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004061 - arylformamidase activity
                     [Evidence IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HSQ12453.1"
                     /translation="MKLYDISLTLSPESIRWVTAQPLELIGRKRMSQGDTNNSSSIHT
                     SVHAGTHVDAPFHFLPDGITIEALPLETFIGPARVCAAEPGTHITA"
     gene            complement(426..1301)
                     /locus_tag="VLM90_05530"
     CDS             complement(426..1301)
                     /locus_tag="VLM90_05530"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HSQ12454.1"
                     /translation="MTSEATAQILALITSVLYASALVSARAGMRYSTPTTVTLVSILM
                     QNALLWSAVFATGGVHAVPLVGIVLFTVVGIFQLGVRLFAYTGVEKIGASRSSALQSV
                     SPLFSATIAIVVLGEQTSALITLGTFLVVMGIVLVSWKPERQLSSFRRWHLLLPIGPA
                     FLTGMNHPIRRYVLTMANEPLFFSALMGLVSFGAFLIYLAASPSSQRLVWHRQALWPF
                     LSTGLFETFSILCIITAISLGRVVIIAPIAASYPVWSLIFAALFLRDVEAINWKVIVG
                     IVSVVGGNFAIHLGR"
     gene            complement(1400..>1907)
                     /locus_tag="VLM90_05535"
     CDS             complement(1400..>1907)
                     /locus_tag="VLM90_05535"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSQ12455.1"
                     /translation="VAVYMAAQEITHISPSELNYTFVGAMGQGSSHALGLALGRPDKK
                     VVVFDGDGSLLMNLGSLVTIGNQAPKNYVHCLCENGCYETNGSVLTPNSGNIRFAECA
                     KNAGYKKTYEIADLADWEQKLPEILNQEGPLFVTLKVEPGEAYPENFPRLYSNEHREK
                     FRQTLAKS"
BASE COUNT          438 a          565 c          559 g          345 t
ORIGIN      
        1 gcggtgatat gcgtgcccgg ctcggcggcg cacacccgcg ccgggccaat aaaagtctcc
       61 agcggcaacg cttcgatagt gatgccgtca ggcaaaaaat gaaacggcgc gtcgacatgg
      121 gtgccggcat ggacgctggt atggatcgac gacgagttgt tggtgtcgcc ctggctcata
      181 cgcttgcgcc cgatcaattc caacggctgc gccgtcaccc aacggatcga ctccggcgaa
      241 agagtcaaag aaatatcgta aagtttcata gcagcatccc ccagtaacga tcttatattg
      301 ccggtagcac agaagggcaa ccacaggggg ttgcccctac gggtcatccc tcccaacctt
      361 tgcggctttg cggctttgcg cctttgcggg agatattccg attttgattc tagcgacgat
      421 ctctctcatc gccccaaatg tatcgcgaag ttgcccccca ctacgctgac gatgccgacg
      481 atcactttcc aattgatcgc ttcgacatcg cgcagaaaca gcgccgcgaa gatcagcgac
      541 cagaccggat agctggcggc gatcggcgcg ataataacca cccgcccgag actgatggcg
      601 gtgatgatgc agaggatcga aaaggtttcg aacaggccag tgctgagaaa cggccacaac
      661 gcctggcggt gccacaccag acgctgagag cttggcgacg ccgccagata gattagaaac
      721 gcgccgaacg acaccagccc catgagcgcg gagaaaaaca gcggctcgtt ggccatggtc
      781 aaaacgtagc gtcggatcgg atgattcatt ccggtcagaa aggccgggcc gataggcagc
      841 agcaaatgcc agcggcgaaa acttgagagc tgccgttccg gcttccacga gaccagaacg
      901 atgcccatga ccacgaggaa ggtgccgaga gtgatcagcg ccgaagtttg ctcaccgaga
      961 accacgatcg cgattgtcgc gctaaagagt gggctgaccg actgcaacgc gctgctgcgc
     1021 gaagcgccga tcttttcgac gccggtgtag gcgaacaagc gcacacccaa ctgaaaaatc
     1081 ccgaccacgg taaaaagcac aatcccgaca agcggcacgg catgcacccc gccggtggcg
     1141 aacacagcgg accacagaag cgcattctgc atcaggatcg acaccagcgt caccgtggtc
     1201 ggagtcgaat agcgcatgcc ggcccgcgcc gacaccagcg ccgaggcgta caagaccgag
     1261 gtgatgagcg cgagaatctg cgccgtcgct tccgaggtca tgattgaagg atcacgcggc
     1321 ggcaggcatg gaaaaaagtc cagcgtcgca cgcctcgatt tcaactcgag actcgcaacg
     1381 ctagactggg aaggcagcgt taactcttgg ccagtgtctg gcgaaacttt tctcgatgtt
     1441 cgttgctgta gagccgcggg aagttctccg ggtaagcctc gcccggctcg actttcagtg
     1501 tcacgaacag cggtccttcc tggttgagaa tctccggcag cttttgctcc cagtcggcga
     1561 gatcggcgat ctcgtaggtc ttcttgtagc cggcgttttt agcgcattcg gcgaagcgga
     1621 tgttgccgga attgggcgtc agcaccgagc cgttggtttc atagcagccg ttttcacata
     1681 gacagtgaac gtagttcttc ggcgcttgat taccgatggt caccagcgag ccgagattca
     1741 tcagcagact gccgtcgccg tcgaacacga cgaccttctt atcgggccgg cccagcgcca
     1801 ggcccagcgc atgggacgaa ccctgcccca tggcgccgac gaaggtatag ttgagttcgc
     1861 tgggagagat atgggtgatc tcctgcgccg ccatgtaaac cgccaca
//
LOCUS       DATIRS010000439         1776 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_918494, whole genome shotgun sequence.
ACCESSION   DATIRS010000439 DATIRS010000000
VERSION     DATIRS010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1776)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1776)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1776
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_918494"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..660)
                     /locus_tag="VLM90_05540"
     CDS             complement(<1..660)
                     /locus_tag="VLM90_05540"
                     /inference="COORDINATES: protein motif:HMM:NF014409.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family protein"
                     /protein_id="HSQ12456.1"
                     /translation="MEAHDNILAIVQARVGSTRLPGKVLADIAGEPMLTRVVSRVAAA
                     QKIDAIVVATSNTVADDRIVELCRANCVAVYRGSESDVLDRYYQAAKEHRAAMVVRVT
                     ADCPLIDPQVIDRVIAAYLTDDCDYAANTIVCTYPDGLDVEVFSFAALESAWRDARRS
                     TDREHVTTYLRTSGRFRLRNVECELGGSLHDHRWSVDEARDLEFVRAIYARLPSKTEF
                     GW"
     gene            complement(644..1684)
                     /locus_tag="VLM90_05545"
     CDS             complement(644..1684)
                     /locus_tag="VLM90_05545"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HSQ12457.1"
                     /translation="MGNSREPTKWRFLVIGCGSIGKRHIENLRRLGVNDIIGFDTQSA
                     RLAKVAGGYGIETVASLEAAWERRPDVCLITAPTSLHLALALKGAEQGCHLFIEKPLS
                     HSWQGVEELLGKVSQQRLVTLVGCNMRFHPGLRELKRLLADDAVGRVIAARVEVGQYL
                     PDWHPWEDYQQSYSARRELGGGVILDAIHEIDYLRWLFGPVVDAVCLAGKLSHLEIDT
                     EDTAAMLLQFANGTFGEVHLDYVQRAYRRTCQIIGDEGTIHWDFAAGQVRWYSARTRR
                     WNQCENPVGWEVNQMYIDEMKHFLACLAGEANPELEVSQAAEVLRIALAAKQSAEQRQ
                     WIRLEGAGGSPR"
BASE COUNT          377 a          561 c          489 g          349 t
ORIGIN      
        1 ccagccgaat tcggtcttcg atggcaaccg tgcatagatc gcccggacaa actccaaatc
       61 gcgcgcctca tcgacgctcc agcgatgatc atgtaacgat ccgcccaatt cacattcgac
      121 gttgcgcaaa cgaaagcgtc ccgacgtgcg cagataggtg gtgacatgtt cgcgatcggt
      181 ggagcggcgt gcatcgcgcc aggcgctctc gagcgccgca aaggaaaaca cttcgacatc
      241 gagtccgtcc ggataggtgc agacgatcgt gttggcggca taatcgcaat catcggttaa
      301 gtatgccgcg atcacccggt cgatgacctg cggatcgatc aacgggcaat ccgctgtgac
      361 tcgcacaacc atggccgctc gatgctcttt ggcggcttgg tagtaacggt ccaacacatc
      421 gctctcgctg ccgcgataga cggcgacgca attggcgcgg cacagctcga caatccggtc
      481 atccgccacg gtattcgacg tcgcaacgac gatggcgtca attttctgtg ccgccgcgac
      541 acgggacacg actcgggtca acatcggctc gccggcgata tcggccagca ccttgccggg
      601 taaacgcgtc gatccgaccc gcgcttgaac gatcgctaag atattatcgt gggcttccac
      661 cagcaccctc caatcgaatc cactgtcgct gctctgccga ttgtttagcg gccagcgcga
      721 tgcgcaacac ttccgctgct tgcgaaacct cgagctcagg attggcttca cccgcgagac
      781 aggcgagaaa atgcttcatt tcatcgatat acatctgatt gacttcccaa ccgacgggat
      841 tttcgcattg gttccatcgc cgcgtacgcg ccgaatacca gcgcacttga ccggcggcga
      901 agtcccaatg aattgtgccc tcgtcgccga tgatttggca ggtgcgccga taggcgcgct
      961 ggacatagtc caaatgcact tcgccgaaag ttccattcgc gaattgcaaa agcatcgccg
     1021 cggtgtcctc ggtatcgatt tcgaggtggc tcaatttgcc ggcaagacaa accgcgtcga
     1081 cgaccgggcc gaagagccag cgcagatagt cgatctcgtg aatggcgtcg agaatgacgc
     1141 cgccaccgag ttcgcggcgc gcgctgtaac tctgctggta atcctcccag ggatgccagt
     1201 ccggcagata ctgcccgacc tcgacgcgcg ccgcgatcac ccggccgacg gcgtcatccg
     1261 ccagcagacg ctttaactcg cgcagccctg gatgaaatct catgttgcag ccaaccaagg
     1321 tcacgagccg ctgctgtgaa actttaccca gcagctcttc gaccccttgc cagctatgcg
     1381 acaaaggttt ttcgataaac agatgacagc cttgctcggc gcctttgagc gccagcgcca
     1441 gatgcagcga agttggcgcg gtaatcaggc aaacatccgg cctccgctcc cacgccgcct
     1501 ccagagacgc gacggtttcg atgccgtaac caccggccac tttggccaac cgtgcgctct
     1561 gggtatcgaa gccgatgatg tcattgacac cgagtcgacg gagattctcg atatgacgct
     1621 tgccgatgga gccgcagcca atcaccaaga agcgccactt cgtaggctcg cgactgttac
     1681 ccatgaaggc cgttttctcc ggtgtgcatg taatggttga gaagttcctt gcgcagtaac
     1741 gtcgcgccga tccggtcatg ctcgaccgca cgcgga
//
LOCUS       DATIRS010000440         1584 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_918583, whole genome shotgun sequence.
ACCESSION   DATIRS010000440 DATIRS010000000
VERSION     DATIRS010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_918583"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(193..675)
                     /locus_tag="VLM90_05550"
     CDS             complement(193..675)
                     /locus_tag="VLM90_05550"
                     /inference="COORDINATES: protein motif:HMM:NF016213.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF456 domain-containing protein"
                     /protein_id="HSQ12458.1"
                     /translation="MEVIVYWVGAALLVGLGLLGLVLPGLPGAPLILTGLIVGAWAND
                     FTYVGLGTIAVLTVLAGLTYAVDFWATMFGAKKFGASKRAIIGALIGLVAGLFLGLPG
                     VIFGPFIGAVIGELSAQRNLHQAARAGIGATIGLVLGAALKIAMALAMIGIFAVMRFL
                     "
     gene            complement(719..946)
                     /locus_tag="VLM90_05555"
     CDS             complement(719..946)
                     /locus_tag="VLM90_05555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12459.1"
                     /translation="MAIYSRKDSMVAWQACIDGQTPNIEHVEVISTHLGFGFSADVYK
                     VIAVRLTQFKGHGVAPATRRRQRLKLERLPR"
     gene            complement(1049..1480)
                     /locus_tag="VLM90_05560"
     CDS             complement(1049..1480)
                     /locus_tag="VLM90_05560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSQ12460.1"
                     /translation="MSEILQPPPASHAMREARGLIELPRLLLRFPSLARQPHGNGEPV
                     LVLPGYGAGDGSTMILKGYLRLLSYRARGWGLGRNHGPVGESLPRLLRRLGNLSRRSK
                     QKVAIIGWSFGGYLARELARERPDLVRLVITLGTPVVGGPK"
BASE COUNT          344 a          472 c          469 g          299 t
ORIGIN      
        1 gcggtgagtt gcaggtcgaa acccgagtcg cggtttacaa agtctcggcc ggtcaggcaa
       61 tcatcgtcaa cgccggtgag tgggtgcgtt acagcacgcc cggggacgag ggcgcgcagt
      121 acgtcgcggt ttgcttgccc gtcttcgcac cggcgacgat gcagcgcgac gccttgatta
      181 actgttcaaa atctacaaaa accgcatcac tgcgaatatt ccgatcatcg ctaacgccat
      241 ggcgattttg agcgcggcgc cgaggactaa gccgatggtg gcgccgatgc cggcgcgggc
      301 ggcctggtgc agattcctct gggcggacag ctcaccgatc actgcgccga tgaacggacc
      361 gaagatgacg ccgggcaggc cgagaaacag gccggcgacg agtccgataa gagcaccgat
      421 gatggcgcgc ttggatgcgc cgaatttctt ggcgccaaac attgtggccc aaaagtccac
      481 ggcgtaagtc aatcctgcca aaaccgtcag aacggctatc gttcccaggc cgacgtaagt
      541 aaaatcgtta gcccaagcgc cgacaatgag acccgttaga attagcggcg cacccggtaa
      601 gccgggtagg acgagtccga gcaaaccgag tccgaccaga agagccgcac cgacccagta
      661 gactatgact tccatgggtt cgcttagtta tcgtcgagcc tggttgcgct gattcgtttc
      721 agcgcggcag cctctctagt ttcaggcgct gccggcggcg cgtcgcgggt gcgacgccat
      781 gccccttgaa ctgcgttaac cgcaccgcga tgactttgta aacatctgcg gagaagccaa
      841 atccgaggtg agtcgatatg acttcgacat gttcgatgtt gggagtttga ccgtctatac
      901 atgcttgcca ggccaccatc gagtccttgc gcgaatagat cgccacaacc ggtacctcca
      961 ggttggccat tttactgctc agctcgacct cggcggctat ggcttcaaca tcgataccgc
     1021 gcttgcgata ggatttcgcc gcagccgttt atttggggcc gccgacgacc ggcgtgccca
     1081 gggtaatcac cagacgaacg aggtcgggac gctcgcgcgc caactcgcgg gccaagtaac
     1141 cgccgaagct ccagccaatg atagcgacct tttgcttgct tcgtcgggac aagttcccca
     1201 accgccgcaa aaggcgcggc agcgattcgc cgaccgggcc gtgatttcgg cccaaacccc
     1261 aaccgcgcgc tcgatagctg agtagacgca aatagccctt gagaatcatc gtcgagccgt
     1321 cgccggcgcc atagcctggt aggaccagaa ctggttcgcc gttgccgtgc ggctggcgcg
     1381 ccaaggacgg aaatcttaat aaaagccgcg gcagctcgat caagccgcgc gcttcgcgca
     1441 tcgcatggga cgctggcggg ggttgtagaa tttcactcat gatccgatgc ctaagctgtg
     1501 ggttcccaat gctagccgaa tttgtccagc ggaacaatgg taaatcgccc aaacagaggt
     1561 gtaacggtct gaataaccgc catt
//
LOCUS       DATIRS010000441         3061 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1803711, whole genome shotgun sequence.
ACCESSION   DATIRS010000441 DATIRS010000000
VERSION     DATIRS010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3061
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1803711"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1207)
                     /gene="radA"
                     /locus_tag="VLM90_05565"
     CDS             complement(<1..1207)
                     /gene="radA"
                     /locus_tag="VLM90_05565"
                     /inference="COORDINATES: protein motif:HMM:TIGR00416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HSQ12461.1"
                     /translation="MAKAKTIFACQSCGFQSTKWLGKCPDCNQWNSFAEERFEKASTP
                     RGELSLGTKEDPAPIHEIDTAEEGRVLSGIGEFDRVLGGGLVPGSVILIGGDPGIGKS
                     TLLLQAFPAVSEKGLTCLYVSGEESPRQIKMRAERLGIQAPNLLVLSETSLERILDHV
                     KKIKPGLLVIDSVQTIFSSAIPSAPGSIAQVRETSGAIIVLAKKTGLTTFLIGHVTKD
                     GAIAGPRLLEHMVDTVLYFEGERGHSFRILRAVKNRFGSTNEIGVFEMKEAGLKEVSN
                     PSEIFLMERPLQVPGSAVVCSMEGTRPILLELQALVSRSFLAVPRRTTIGVDHNRVSL
                     LVAVLEKKLGAKLFDQDIFVNVAGGVHVDEPAVDLGIVAAIASSSREATLDPKSVFLG
                     EVGLAGEIRG"
     gene            1297..2469
                     /gene="bioF"
                     /locus_tag="VLM90_05570"
     CDS             1297..2469
                     /gene="bioF"
                     /locus_tag="VLM90_05570"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: protein motif:HMM:TIGR00858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008710 - 8-amino-7-oxononanoate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HSQ12462.1"
                     /translation="MSAGYLEAELEQIKNAGLHRRLRRVGGDQGPTVSIDGREVINFS
                     SNNYLGVANHPELAAAAKEAIDRYGCGSGASRLISGNMALHEELEVKLAQFKGSEAAL
                     VFNSGFQANTGVISTLAGEGDAIFSDALNHASIIDGCRLARAQTFVYAHKDLNQLEVK
                     LKDATGFRRKLIVTESIISMDGDEAPLTEIVQLAEKYDAVVMVDEAHATGIFGAGGAG
                     VVQKLGLGDRVLVQMGTLGKALGGFGAYIAGSHGLRDLLINRCRSFIFTTSLPPAVMA
                     MALAAIDIVKREPERRDALWQNCRSLNEGLSSLGFQVAASASPILPLIIGDATECMRF
                     SEHLLEKGVFAQGIRPPTVPPGTSRLRITLMATHTRAQIDRALEAFKAVKAVKESR"
     gene            2466..>3061
                     /locus_tag="VLM90_05575"
     CDS             2466..>3061
                     /locus_tag="VLM90_05575"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSQ12463.1"
                     /translation="MTTYHDRLKQLDHTYLWHPFTQMQEWIGEEPCIISRGDGNYLVD
                     VHGRKYLDGVSSLWCNVHGHRKKELEDAIREQLDKIAHSTFLGLSHVPGIQLAQKLIE
                     IAPKGLQRVFYSDSGATAVEIALKMAVQYWQLKGEGKRTQIASLAESYHGDTVGSMSL
                     GFSETFHRFHKSLLFPVLRITPPHMFRYYQRMTEAAAL"
BASE COUNT          651 a          844 c          937 g          629 t
ORIGIN      
        1 tgccgcgaat ttccccagcc aggccgactt cgcctaagaa aaccgatttg gggtcgaggg
       61 tcgcttcgcg gctgctggag gcaatggcag cgacgatgcc taaatccacc gccggttcgt
      121 cgacgtggac gccgccggcg acattgacga agatgtcttg atcgaagagt ttggcgccga
      181 gtttcttttc caagacagcg acgagcaaag agacacggtt atgatcgacg ccgatggtcg
      241 tgcggcgcgg cacggcgaga aacgaccggc tgaccaacgc ttgcaattcc agcaaaatcg
      301 gccgcgtgcc ttccatgctg caaacgacgg cggagccggg aacctgcagc gggcgctcca
      361 tcagaaaaat ctccgacgga ttgctgacct ctttcaatcc tgcttccttc atctcgaaca
      421 cgccgatctc gttggtcgag ccgaaacggt ttttgacggc gcgcaggatg cgaaagctat
      481 ggccgcgctc gccttcgaag tagagcacgg tgtcgaccat gtgctccaat aatctcgggc
      541 cggcaatggc gccatctttg gtgacgtggc cgattaaaaa cgtcgtcaag ccggtttttt
      601 tggcgagcac gatgatagcg ccggaggttt cccggacttg ggcgatgctg ccgggcgccg
      661 acgggatcgc cgaggaaaaa atcgtctgca ctgaatcgat caccaacaga ccgggtttga
      721 tcttttttac atgatcgaga attcgttcca gcgaagtctc gctcaaaacg agtaagttgg
      781 gtgcttgaat accgagccgc tcggcgcgca tcttgatctg acgcggcgac tcttcgccgg
      841 aaacatagag gcaggtgagt cccttttcgc tcacagcggg gaaggcttgc agcagcagcg
      901 tggatttgcc gatacccgga tcgccgccga tcagaatgac cgatccggga accaagccgc
      961 cgccgaggac gcgatcgaac tcgccgatgc cggaaagcac tcggccttct tcagcggtat
     1021 cgatctcatg gatcggtgct ggatcttctt tggtaccgag gctcagttcg ccgcgcggcg
     1081 tcgaagcttt ttcgaagcgt tcttcggcga agctgttcca ctgattgcag tcaggacact
     1141 tgccgagcca cttggtcgac tgaaagccgc agctctggca agcgaagatg gttttagctt
     1201 tggccatggt tcggtttctt atagcaggaa agtccgccga agagtaagaa ttggggccgg
     1261 ttgataattg cttcgttggt gtaataatcc gggaccatgt cggctggcta tctcgaagcg
     1321 gagttggagc agatcaaaaa tgcgggcctc catcggcgct tgcgccgcgt ggggggtgat
     1381 cagggaccga cggtatccat cgacggccgc gaggtcatca atttttcttc aaacaactat
     1441 ctcggtgtcg ccaatcatcc tgaactagcg gctgcggcga aggaggccat cgaccgctac
     1501 ggctgtggct cgggcgcttc acggttgatt tccggcaaca tggcgctgca cgaagagtta
     1561 gaagtcaaac tcgctcagtt caagggcagc gaagctgcgt tagtattcaa ttccggtttc
     1621 caggccaaca cgggcgtcat ctcgaccttg gccggcgagg gcgacgcgat tttcagcgac
     1681 gcgctcaatc acgccagcat catcgacggc tgccgcttgg cgcgcgccca gacattcgtc
     1741 tatgcccaca aggatctcaa tcagctcgaa gttaagctca aggatgcgac tggtttcagg
     1801 cgcaagctca tcgtcaccga gtcgatcatc agcatggacg gcgacgaggc gccattgacg
     1861 gagatcgtcc aactggcgga gaagtatgac gccgtggtga tggtcgacga agcgcacgcg
     1921 acgggtatct ttggcgcggg cggagcaggg gtggtgcaga aactgggact cggcgatcgg
     1981 gtgctcgtgc aaatgggcac cttgggcaag gcgctcggcg gtttcggcgc ctatatcgcc
     2041 ggcagccacg ggttacgcga tttgctgatc aaccgctgtc gcagttttat attcacgact
     2101 tctctgccgc cggcggtcat ggcgatggcg ctggcggcga tcgatatcgt gaaacgcgag
     2161 ccggagcggc gtgacgcgtt gtggcagaac tgccgcagct tgaacgaggg attgagcagt
     2221 ctcggattcc aagtcgctgc gagcgcgagc ccgatcttgc cgctgatcat cggcgacgca
     2281 accgagtgca tgcgattctc ggagcattta ttagagaagg gagttttcgc tcaaggtatc
     2341 cgtccgccga ctgtgccgcc gggcacttcg cgactgcgca tcacgctgat ggcgacgcac
     2401 acgcgcgcgc agatcgaccg cgcgctagag gcattcaaag cagtcaaagc agtcaaagaa
     2461 tcaagatgac gacctatcac gataggctaa aacagttgga ccacacgtat ctctggcacc
     2521 cgttcacgca gatgcaggag tggataggcg aagagccgtg catcatcagc cgcggtgacg
     2581 gcaactacct ggtcgacgtg catggacgaa aatatctcga cggcgtttcc tcgttgtggt
     2641 gcaatgtgca cggccaccgc aaaaaagaac tcgaggacgc gattcgcgaa cagctcgaca
     2701 agatcgctca ttcgaccttc ttgggattga gccacgtgcc gggaattcaa ctggcgcaga
     2761 agttgattga gatcgcgccc aagggtttgc agcgggtttt ttattccgac agcggcgcga
     2821 cggcggtcga gatcgccctg aagatggcgg tgcaatactg gcaactcaag ggcgaaggca
     2881 agcgcacgca aatcgcgtcg ctagcggagt cgtaccacgg cgacaccgta ggttcgatga
     2941 gtctgggctt ttcggaaact tttcatcggt ttcataagag tcttttgttc ccagtgctgc
     3001 gcataacgcc gccgcacatg tttcgctact accagcgtat gaccgaggcg gctgcgcttg
     3061 a
//
LOCUS       DATIRS010000442         1576 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1213843, whole genome shotgun sequence.
ACCESSION   DATIRS010000442 DATIRS010000000
VERSION     DATIRS010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1576
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1213843"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..660)
                     /locus_tag="VLM90_05580"
     CDS             complement(<1..660)
                     /locus_tag="VLM90_05580"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12464.1"
                     /translation="MQKLRDLGYVEDNNIGFEIQMRRSPNSDWSEPAAQLIKLKVDII
                     VADGSGPATAAMKATKSIPIVMTSSTDPVGIGLVTSLAQPGGNVTGLSSVSGELGGKL
                     LDILKEIMPRLTRVVIPGPAPGSPTQDLFMKETMAPARALKVELIRVAVRGPEDYDQV
                     FQTAAKRKAQALVVRIPTTIAPAQRQQFVELAIKHRLPAIYQATNWVDAGGLLSYGAD
                     RN"
     gene            complement(1166..>1576)
                     /locus_tag="VLM90_05585"
     CDS             complement(1166..>1576)
                     /locus_tag="VLM90_05585"
                     /inference="COORDINATES: protein motif:HMM:NF014950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSQ12465.1"
                     /translation="LRERKEDIPALANYFLQRCAADTKQKFTTIANDAQDKLLAYSWP
                     GNVRELANVIERAVVLGDGPQLTLHHLPARVIGAQPPGGAKEVSFHDAINSYRRELIV
                     RALAAAQGNRANAAKALGMHRTHLMKLLKALQIT"
BASE COUNT          314 a          401 c          510 g          351 t
ORIGIN      
        1 gttgcggtcg gcgccgtagg agagcaggcc gccggcatcg acccagttgg ttgcctgata
       61 gatggcgggc aaacgatgct ttatcgccag ttcgacgaac tgttggcgct gcgccggcgc
      121 aatagtcgtc gggatgcgca ctaccagcgc ctgggctttt cttttggccg cggtttgaaa
      181 aacttgatcg taatcttccg gtccgcgcac ggcgactcga atgagctcca ccttcaacgc
      241 ccgggctggt gccatggttt ccttcatgaa caagtcttgt gtcgggctcc ccggcgccgg
      301 tccggggatc acgacgcggg tgagacgcgg catgatttct ttcaaaatat ccaaaagctt
      361 gccgcccaac tcgccgctga cgctcgacag gccggtgacg ttgccgccgg gctgagccaa
      421 gctggtgacc aggccgatgc cgaccgggtc ggtactgctg gtcatgacta tgggaatcga
      481 tttcgtcgct ttcatggcgg cggttgccgg gccggaacca tcggcgacga tgatatcgac
      541 tttcagtttg atgagttgag ctgcgggttc ggaccagtcg ctgttcgggc tgcgcctcat
      601 ctggatttca aagccgatgt tattgtcttc gacataacca agatcgcgga gcttttgcac
      661 gaatgccggc gggaccgtgg aaccggcggc ggtcaggaat ccaatccgtg catgtttgtt
      721 ggattgttga gcgggggcgg acggaacaag cagtaccatc caaatggcaa cgaccacggt
      781 caatttagca atcataaatt ttcggcaacc ttccggcagg gctgcatcgg cgcggcgagc
      841 aaccaaaata ttggcgaacg atggcgaaca gcggacacaa acagcacaga gaactttcga
      901 gcttcgctag cgcaagcggt ggaccagggt tgaggtatcg gcagagtcta tttaacttat
      961 tgaaagggtg ggagattttg caattgagtc gggcgttggg gaagctctga gatcccttgc
     1021 cgagtagtcg ttttgctact cggtgtagca aaaatgcgac acccggccgg ggacggcagt
     1081 aaggagtaaa gggaagtaag gcgtaaatag tgaggagccc ggaatcagaa tatccttact
     1141 actgactatt tactcctgac tgttttcaag tgatttgcag cgccttcaac agcttcatca
     1201 aatgggtgcg gtgcatgccc agagctttgg cggcgttggc gcggttgcct tgggcggcgg
     1261 cgagggcgcg gacgatgagc tcgcggcggt agctgttgat ggcgtcgtgg aatgacacct
     1321 ctttcgcacc cccgggcggt tgagcgccga tgacgcgggc ggggaggtgg tgcaatgtca
     1381 attgcgggcc gtcgcctaag actacggcgc gttcgatgac gttggcgagc tcgcggacat
     1441 tgcctggcca gctataggcc aggagtttat cctgggcgtc gttggcaatg gtagtaaatt
     1501 tctgcttggt atcggcggcg cagcgttgca agaaataatt cgccagcgct gggatgtctt
     1561 ctttgcgctc gcgcag
//
LOCUS       DATIRS010000443         1768 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_918818, whole genome shotgun sequence.
ACCESSION   DATIRS010000443 DATIRS010000000
VERSION     DATIRS010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1768
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_918818"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(15..929)
                     /locus_tag="VLM90_05590"
     CDS             complement(15..929)
                     /locus_tag="VLM90_05590"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12466.1"
                     /translation="MRPVSPPNPNTRQPKLIVPPGACDTHLHVYGPSEIYPLAAERNY
                     TPDPRSTLDDYLKVHRALGLERAIIVTGSANGTNNQVTLDALARMGEKFKGLALLDAA
                     ITEVELLRLKDGGFTGFRVKANGKGGSSFEETKQLIARVRGFDWHVEFMSQSLAEVIG
                     AMPFLSSLQLPYVFDHVAHAEPRQNEQDHEFKELLTILKNEEQAWISLYSFYQSSESG
                     PPLYADMVDVVRAIIEARPDRVVWGSNWPHSGIAVPTPNDGDLLDFLLAAAPEENTRK
                     LILADNPAKLYGWPRSGLNESKRVVPTN"
     gene            1153..>1768
                     /locus_tag="VLM90_05595"
     CDS             1153..>1768
                     /locus_tag="VLM90_05595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12467.1"
                     /translation="MASTNGTLQLFLLKADGLTRCRWDGRSERVEDLSTALEGETVRE
                     VARYGVNPRRLYAATLTEIHVSDDGGENWKWVPSGGIDHRDIWAMAAHPTRTDEIYVG
                     TLPAAIYVSENGGRSFRELTDFRQLPAYGKWTFPPPPHVAHIRCITLDARVPDEILVG
                     IEEGGVARSRDRGASWEDISGPSSQTAFPEFNDPAGILPYQMGQH"
BASE COUNT          342 a          488 c          557 g          381 t
ORIGIN      
        1 gaagttcaaa tcgttcaatt cgtcggaaca acgcgcttgg attcattgag gccagatcgc
       61 ggccagccat agagtttcgc cggattgtcc gcgagaatga gtttgcgcgt gttttcctcg
      121 ggcgcggcgg cgagcaggaa atcgagcagg tcgccgtcgt tgggtgtcgg cacggcgatg
      181 ccagagtggg gccaattgct gccccagacg acgcgatcgg gccgggcttc gatgatcgcg
      241 cgcacaacgt cgaccatgtc ggcgtacaac ggcgggccgg actcggacga ttgatagaag
      301 ctatagaggc tgatccaggc ctgctcttca ttcttgagaa tcgtgagcag ctctttgaac
      361 tcgtgatcct gctcgttttg gcgcggctcg gcatgggcca cgtggtcgaa cacatacggt
      421 agttggagag aactcaagaa tggcatagcg ccgatgactt cagccagcga ttgggacatg
      481 aactcgacat gccagtcgaa cccacgcacg cgcgcaatca gctgtttggt ttcttcgaag
      541 gacgaaccgc ctttgccgtt ggccttcacg cgaaagccgg tgaaaccgcc gtctttcagc
      601 cgcaacaatt caacctcggt gatcgccgca tcgagcagcg caagaccttt gaatttttcg
      661 cccatgcgcg ccagggcatc cagcgtgacc tggttgtttg tgccgttggc gctgccggtg
      721 acgatgatcg cgcgttccaa acccaaagcg cggtgaactt tgagataatc gtcgagagtc
      781 gagcgtgggt cgggagtgta attgcgctcg gcggcgagcg ggtaaatttc gctggggccg
      841 tagacgtgga ggtgggtatc gcaggcgccg ggcgggacga ttaattttgg ttgtctggtg
      901 ttcggattgg gcggtgacac cggtcgcatt ctgagcctct ctcgacctaa aggttccgtt
      961 gtatattcag gctactttgg tccatgcaac cggcgaatag agcaaatgct acaggagtaa
     1021 attctcgcct tgacggcggt tcctggtttg ccatattttg cttgctgggg acttttgctg
     1081 cgcgtgatgc tttatactcg atccgcgcgc agcctgtcta ccgaccgatt ctcgctaatg
     1141 gagggaaatt ttatggcctc gacgaacggt actttgcaat tgttcttgtt gaaagccgat
     1201 ggactgacgc gctgtcggtg ggacgggcga tcggagcgcg ttgaagatct tagcaccgcg
     1261 ctcgagggag aaaccgttcg cgaggtcgcg cgctacggcg tcaatccacg gcgactttat
     1321 gccgcgactt tgaccgaaat ccatgtcagc gacgacggcg gcgagaactg gaagtgggtg
     1381 ccgtcgggcg gcatcgatca tcgcgatatc tgggccatgg cggcgcatcc gacgcgcacg
     1441 gacgagatct acgtcggcac cttgcctgcc gcgatttacg tgagtgagaa cggcggccgg
     1501 tcgttccgcg aactcacaga cttccgtcaa ttgcccgcct acggtaaatg gacttttccg
     1561 ccgccaccgc acgtggcgca tatccgctgc atcacgcttg acgcgcgcgt gcccgacgaa
     1621 attctcgtcg gcatcgaaga aggcggcgtc gcgcgcagcc gcgaccgcgg cgcgagttgg
     1681 gaagacatca gcggcccgag cagtcaaacg gcttttccgg agttcaacga ccccgccggc
     1741 attttgccgt accagatggg ccagcatg
//
LOCUS       DATIRS010000444         1734 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_33621, whole genome shotgun sequence.
ACCESSION   DATIRS010000444 DATIRS010000000
VERSION     DATIRS010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1734)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1734)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1734
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33621"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..501
                     /locus_tag="VLM90_05600"
     CDS             <1..501
                     /locus_tag="VLM90_05600"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSQ12468.1"
                     /translation="PILLIRPEEDGLPPATITLKRVVVPLDGSGLAEKVLPHVASLAT
                     KLKLEVQLVRAYALPPDAYLVADGVIEQGPAQFRRSKHEECEKYLDGKVAGLRADGVD
                     PVTATVIEGDAANEIVELAAGSPQSLIAMSTHGRSGVGRWVLGSVAERVVQHSRAPVL
                     LIRASG"
     gene            549..1034
                     /locus_tag="VLM90_05605"
     CDS             549..1034
                     /locus_tag="VLM90_05605"
                     /inference="COORDINATES: protein motif:HMM:NF015941.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine-specific kinase"
                     /protein_id="HSQ12469.1"
                     /translation="MELLTVTIDKPEDINFILGQSHFIKTVEDIHEVLVQSIPGIKFG
                     VAFCEASGAMLVRWSGTDGAMIELAKRNALALSAGHSFILFLGAGYFPVSVLNAIKMV
                     PEVCRIFCATANPVEVIIAETTQGRGIMGVIDGGKSKGVEDAAGIAWRKELLRKIGYK
                     L"
     gene            1151..>1734
                     /locus_tag="VLM90_05610"
     CDS             1151..>1734
                     /locus_tag="VLM90_05610"
                     /inference="COORDINATES: protein motif:HMM:NF015715.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HSQ12470.1"
                     /translation="MDVAAFLLNATRGGLGNLAAYLAAHVLLCLLPAFYIAGAMTALI
                     PKESVTRFLGRDTRRAVSYPAAALAGGLLAVCSCTIVPLFAGIYKKGAGIGPAMTFLF
                     FAPAANILALVYTGSVIGVDLAFARLFLSLAFGIGIGLIMALLFRADDAAHDAATTQM
                     FAPQSVKGMSRTALIFLLGWVAVLLFGTLKLDILT"
BASE COUNT          336 a          491 c          520 g          387 t
ORIGIN      
        1 ccaatcttgc tgattcgccc ggaggaagat ggtctgccac cggcgaccat cacgctcaaa
       61 cgagttgtcg ttccgctaga tggctcgggc ttggccgaaa aagttctgcc ccatgtcgcg
      121 tccctggcaa caaaactaaa actcgaagtg cagctggtaa gagcctatgc cctgccgccc
      181 gacgcctatt tggttgctga cggtgtgatc gaacaggggc cggcgcagtt tcgcaggtcg
      241 aagcacgagg aatgcgaaaa atacttggac ggcaaagtcg ccgggctgcg tgctgacggc
      301 gtcgacccag tgaccgcaac tgtgatcgag ggcgacgcgg ccaacgagat cgtcgagctt
      361 gccgcaggat cgccgcaaag cctcatcgcc atgtcgaccc acggcaggtc cggcgtcggt
      421 cgttgggtgc ttggcagtgt cgccgaaagg gtcgtccaac actcgcgcgc gccggtgctg
      481 ctgattcgcg ctagtggcta ggttgagcga gtcaataccc acgcgcacag ctcgcaggtt
      541 atcgcgttat ggaattactg accgtcacca tcgataagcc cgaagacatc aatttcatcc
      601 tcggccaaag tcacttcatc aagaccgtcg aagatatcca tgaagtgctg gtgcaaagca
      661 tccccggcat caagttcggc gttgccttct gtgaagcgtc cggcgccatg ttggtgcgct
      721 ggagcggcac cgacggcgcc atgatcgaac tggccaagcg taacgccctg gcgctgtcgg
      781 cgggacatag ctttatatta tttctcggcg ccggttactt tcctgtgagc gtgcttaacg
      841 cgatcaaaat ggtccccgag gtttgccgca tcttctgcgc caccgcgaac ccggtcgaag
      901 tgatcatcgc cgagaccacg caagggcgcg gtatcatggg tgtcatcgac ggcggcaaga
      961 gtaaaggcgt cgaggatgca gccggcatcg cctggcgcaa agagctcttg cgtaaaatcg
     1021 gctataaact gtagttcacc cggatggcca agattttcga tggttagatt taataacgat
     1081 ccttcaacat gatcttgaag ggtatgcatc acatgagtct agttgcccgg cgacgagaac
     1141 ggagcgggtg atggatgttg cggcgttcct gctcaatgca actcgcggcg gtctaggcaa
     1201 tctagcggcg tacctagcgg cgcatgtgct tttatgtctg ttgccggcat tttatatcgc
     1261 cggggcgatg accgcgctga tcccgaagga aagcgtgacg cgctttctcg gccgcgacac
     1321 gcgccgagcg gtttcgtatc cagcggcggc gctggcgggg ggcttgctgg cggtgtgttc
     1381 gtgcacgatc gtgccgcttt tcgccggcat ctacaaaaag ggcgccggca tcggcccggc
     1441 gatgacgttt cttttttttg cccctgcggc aaatatcctg gcgttggttt ataccggcag
     1501 tgtcatcggc gtcgacttgg cctttgcccg gttatttctc tcgcttgcct tcggcatcgg
     1561 cattggcctg attatggctc tactcttccg agcggatgac gcagctcatg atgcagcgac
     1621 cactcagatg ttcgcgccgc aaagcgtaaa aggcatgagc cgcaccgcat tgatttttct
     1681 tctgggctgg gtcgcagtgc tgctcttcgg cacgttgaag ctcgatattc tcac
//
LOCUS       DATIRS010000445         1775 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1706003, whole genome shotgun sequence.
ACCESSION   DATIRS010000445 DATIRS010000000
VERSION     DATIRS010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1775)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1775)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1775
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1706003"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..598
                     /locus_tag="VLM90_05615"
     CDS             <1..598
                     /locus_tag="VLM90_05615"
                     /inference="COORDINATES: protein motif:HMM:NF016301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HSQ12471.1"
                     /translation="QLPPGGKARCLRCGHTLASAPTDSIDRTLALTLTAAIVLIVANT
                     SPLMGLSAVGRQASTTIIGGAYEMWLQGQDVTAMVVAFCAVIAPASYILFMLTVLIAV
                     RRPPAPHWVGEMLRWAESMRPWSMSEVMMLGILVALIKIAELATVVPGIGIFAVGALI
                     FLFAAIMVTFHPSEVWQRVEWADGEVAARTDATGAGEA"
     gene            805..1446
                     /locus_tag="VLM90_05620"
     CDS             805..1446
                     /locus_tag="VLM90_05620"
                     /inference="COORDINATES: protein motif:HMM:NF016301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HSQ12472.1"
                     /translation="MSTTPLTAAQAGLVSCETCALLSRPADPAEPGYCPRCGGKLEWR
                     HHHSIQYTWALLIAATICFIPANVLPVMSTTTLGSADAENILGGVEFLYTSGSWPLAL
                     IVLIASIMIPLGKLVALAYLLITVQRGSARGNRERTRLYRMVEFIGRWSMLDVFVATF
                     TVALVQLQPLMFVEPGMGVLFFAAVVVLTMIAAESFDPRLIWDSLGNREGLHG"
     gene            1439..>1775
                     /locus_tag="VLM90_05625"
     CDS             1439..>1775
                     /locus_tag="VLM90_05625"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HSQ12473.1"
                     /translation="MAENIDRDDLPQATVVRKKGTRISVVWIIPILAAVVAAGIAIQR
                     IMSEGPTINIVFKAAEGLEAGKTFIKYKDVNIGQVTAVKLAADHSKVEVTEKIDKSAA
                     GLMVEDAKFW"
BASE COUNT          334 a          513 c          574 g          354 t
ORIGIN      
        1 gcaactgccg cccggcggta aggctcgctg cctgcgctgt gggcacaccc tcgcctcggc
       61 gccaaccgat tccatcgacc gcacgctggc gcttacgcta acggcggcca tcgtactcat
      121 tgtcgccaat acttcaccgc tgatggggct ctcggccgtc gggcgccagg cgagcacgac
      181 gatcatcggc ggcgcctacg agatgtggct gcaagggcag gatgtgacgg cgatggtggt
      241 agctttctgc gcggtgatcg ctccggcgag ctacatcctg ttcatgctga cggtattaat
      301 cgctgtgcgg cggccgccgg cgccgcactg ggtcggggaa atgctgcgct gggcggagtc
      361 catgcggccc tggtcgatga gcgaagtgat gatgctcggt atcctggtcg cgctgatcaa
      421 aattgccgag ttggcaacgg tggtgcccgg catcggcata tttgcagtcg gtgcgctgat
      481 ctttctgttc gccgcgatca tggtcacttt ccatccgagc gaggtctggc aacgggttga
      541 atgggccgac ggcgaagtgg cggcgcgcac tgacgcgacc ggcgcggggg aagcataggg
      601 cggcggcgcc gcaacgaaaa tagaaagcgc gttccagtcg ttccaaccgt tcaagccgtt
      661 caaatcgttg tcggaaggag aatcggaacc ggcgaattca cggcaaaacg caaaaggcgg
      721 agacgaaatt gatttgtcgg gccgcgattc atcgcgtcct ccagttgttg cgcaagctgc
      781 gataacgatt acgcacgtaa aataatgagc actaccccac tcactgcggc ccaggcggga
      841 ctggtttcct gtgaaacctg cgccctgttg tcgcggccgg ccgatccggc cgagccgggc
      901 tactgcccgc gctgcggcgg aaaactcgaa tggcgccacc accactcgat ccaatacacc
      961 tgggcgctgc tcatcgcagc gacaatttgt tttattccag ccaacgtcct gccggtgatg
     1021 agcacgacca cgctcggctc cgccgatgcc gaaaacatcc tggggggcgt ggagtttctt
     1081 tacacttcgg gatcgtggcc gctggcgctg atcgtgctga tcgccagcat aatgatcccg
     1141 ctcggcaagc tggtggcgct cgcctatcta ttgatcacgg tgcagcgcgg ctcggcgcgc
     1201 ggcaaccgtg agcgcacccg gctgtatcgc atggtcgaat tcatcgggcg ctggtcgatg
     1261 ctcgatgtct tcgtcgccac tttcactgtc gccctggtgc aactccagcc gctgatgttt
     1321 gtcgaacccg gcatgggggt gctgtttttc gcggcggtgg tggtgttgac gatgattgcc
     1381 gcggagtcct tcgacccgcg cttgatttgg gattcgcttg gaaacaggga ggggctgcat
     1441 ggctgagaac atcgatcgcg acgacctgcc gcaggctacc gtcgtgcgga agaaagggac
     1501 aagaatctct gtcgtctgga tcattcccat tctcgccgca gtggtggctg ctggcatagc
     1561 catccagcgc atcatgagcg agggcccgac catcaacatc gttttcaaag ccgcagaggg
     1621 gttggaggcc ggcaagactt tcatcaagta taaggacgta aacatcggcc aggtgacggc
     1681 ggtgaagctt gccgccgacc actcgaaggt agaagtgacg gagaagattg acaaaagcgc
     1741 agcggggctg atggtcgagg atgccaagtt ctggg
//
LOCUS       DATIRS010000446         1725 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_230761, whole genome shotgun sequence.
ACCESSION   DATIRS010000446 DATIRS010000000
VERSION     DATIRS010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1725
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_230761"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..263)
                     /locus_tag="VLM90_05630"
     CDS             complement(<1..263)
                     /locus_tag="VLM90_05630"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSQ12474.1"
                     /translation="MEKLSAEAEKPPQILLHGVAKVYGSGGAAMHALQGVDLRIDRGE
                     LVAVMGPSGSGKSTCLNILGCLDTPTSGSYRFEGVEVGKLSRG"
     gene            complement(263..1549)
                     /locus_tag="VLM90_05635"
     CDS             complement(263..1549)
                     /locus_tag="VLM90_05635"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSQ12475.1"
                     /translation="MAANQKDLGDINQVIGADDGTGKRRYWKYSIVVVAALVALALVA
                     IFLRSGDGTVVRYATARVTRGDLTVSVTATGTVQAVNQVDVGTEISGTIKTVEVDYND
                     RVKIGQVLARIDTEKLQAQVSQSQAALESAQARLSEAQATVTEVRDNLERFKQVREMS
                     GGKVPSQREFDAAGALLKRAVSNETTLKAQIAEAKWKLSIDQTNLSKAVIRSPINGVV
                     LKRQVEPGQTVAASLQTPVLFTIAENLAQMEVQVDVDEADVAQVQIGHRASFTVDGYP
                     GRAFSAVVKQVRFGPETVQGVVTYKTLLSVDNSDLALRPGMTATANITTMRSANVMLV
                     PNTALRFSPPVAEGQAQPSGSLISRLFPRPPPASRPRDTADAKGKQQRVYVLRDGQPS
                     PVSVTTAASDGIMTEITGGDLKVGMEVVTDVISASP"
BASE COUNT          324 a          545 c          487 g          369 t
ORIGIN      
        1 tggccgcgcg acagtttgcc cacttccacg ccttcgaagc gataagaacc cgaagtcggg
       61 gtatccaagc agccaaggat gttcaagcag gtagattttc ccgagccgct tggccccatg
      121 acggcgacta actcgccccg gtcgatgcgc agatcgacac cctgcagcgc atgcatcgcc
      181 gcgcctcccg agccgtagac cttggctaca ccgtgaagca ggatctgcgg tggtttctca
      241 gcctccgccg ataacttttc catcatggac tcgcactgat gacatcggtc acgacctcca
      301 tcccaacctt gaggtcgccg ccggtaattt cggtcatgat gccgtcgctg gctgcggtgg
      361 tcaccgaaac cggcgacggt tggccgtcgc gcaatacata gacgcgctgc tgcttgcctt
      421 tggcgtccgc agtgtcgcgc ggccgcgaag cgggcggcgg acgcggaaac aaccggctga
      481 taaggctgcc gctcggttgc gcctgtccct cggccaccgg cggcgaaaat cgcagcgccg
      541 tgtttggcac caacatgacg ttggcactgc gcatcgtcgt gatattcgcc gtggccgtca
      601 tgccgggtcg caaggcgaga tcggagttgt cgaccgacag caaggttttg taagtgacga
      661 cgccctgaac ggtctcggga ccaaaacgca cttgcttgac cacggcgcta aaggctcgac
      721 cgggatatcc gtccaccgtg aaactggccc ggtggcctat ctggacctgc gctacatccg
      781 cctcgtcgac gtcaacctgc acctccattt gcgccaggtt ttcggcgatg gtgaaaagca
      841 ccggcgtttg cagcgaggcc gcgaccgttt ggccgggctc cacctgccgt ttgagcacga
      901 cgccgttgat cggcgaccga atgaccgctt tggacaaatt ggtctgatcg atgctgagct
      961 tccacttcgc ttcggcgatc tgcgctttga gcgtcgtctc gttcgacacc gctcgtttga
     1021 gcagagctcc ggcggcatca aattccctct gcgatggcac cttgccgccg ctcatctcac
     1081 gcacctgttt gaagcgctct aaattgtcgc gcacttcagt gaccgttgcc tgcgcctcgc
     1141 tcaacctggc ctgcgccgac tccaacgccg cctgggattg cgacacctgc gcctgcaatt
     1201 tttcggtgtc gatccgcgcc agcacctgac cgatcttcac ccggtcgttg tagtcgactt
     1261 ccaccgtctt gatcgttccg gaaatttcgg tgccgacgtc cacttgattg accgcctgca
     1321 cagtgcccgt ggctgtgacg ctcacagtaa gatcgccgcg ggtgaccctt gcggtggcgt
     1381 agcgcacgac cgtaccgtcg ccggacctga ggaatatagc cacaagcgcg agggccacca
     1441 atgcggcgac gacgacaatc gagtacttcc aatagcgccg ttttcccgtg ccgtcatcgg
     1501 cgccgatgac ttggttaatg tcgcctaaat ctttttgatt cgcagccatg acgtttcttg
     1561 gtcgctatct tgttagagca acgaacatgc cgccggataa ttgcagcctg gcggctaaga
     1621 tcgccggtct tttctcaaga gtgcaaaatc aacgcgattg aatttgcagg aatgagtaaa
     1681 acatttacga aacggagctt gagcgaatgc cgcgccgcta gatat
//
LOCUS       DATIRS010000447         1542 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1411121, whole genome shotgun sequence.
ACCESSION   DATIRS010000447 DATIRS010000000
VERSION     DATIRS010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1542
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1411121"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1542
                     /locus_tag="VLM90_05640"
     CDS             <1..>1542
                     /locus_tag="VLM90_05640"
                     /inference="COORDINATES: protein motif:HMM:NF012901.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I polyketide synthase"
                     /protein_id="HSQ12476.1"
                     /translation="SSRQCDIAIAGGVAVRFPQTDNASRQAGGIYSQDGHCRAFDARA
                     TGTVFSDGVGAVVLKRLGDAEREGDRIDAVIRGWAVNNDGSNKASFAAPSVTGQAAAI
                     ARAQAHAEVRPWDVSYVEAHGTGTPVGDPIEFAALARVFRRGAGERWVCAMGSVKSNI
                     GHLDAAAGIAGLIKTVLALKHREIPATLHFERANPEIDLDASPFYIVDRLRPWLTDGE
                     RRIAGVSSFGIGGTNCHIVLQDAALAAPLAVQTALPAHLLTFSAASAAALDELAGSYR
                     QFLAQNPMADLAGIAAASQKSRSHYSHRAAIVGASVQQMRESLSQDRGAGEVDRRWLG
                     KAVTSAYPEIGFLFAGQGTQYVNMGREIYQANRDFRTVLERCDEILRDQLERPLLDVM
                     FGASGELIERTDYAQPALFALEFALAELLQSWGIKPKFVMGHSLGEYVAACVAGVFTL
                     EDGLRLAAARGRLMQQLTGAGKMLAVTAEQTILDALLRRFPAVAIAAINSPSQTVLSG
                     AADAID"
BASE COUNT          275 a          456 c          493 g          318 t
ORIGIN      
        1 agcagcagac agtgcgacat tgccatcgcc ggcggtgttg ccgtgaggtt tccgcaaacg
       61 gacaacgctt cgcgccaagc gggcgggatc tattctcaag acggccattg ccgcgccttc
      121 gatgccagag cgacgggaac cgtgttcagc gacggtgtcg gcgccgtcgt cttgaaaagg
      181 cttggcgatg cggagcgcga aggcgaccgc atcgatgcgg tgattcgcgg ctgggcggtg
      241 aacaacgatg gttcgaacaa agccagcttt gccgcgccca gcgtcactgg ccaggccgcg
      301 gctatcgcgc gcgcccaagc tcatgccgag gtgcggccgt gggatgtcag ctacgtcgaa
      361 gcgcacggaa ccggcacacc ggtgggcgac cctattgaat ttgccgcgct cgcccgcgta
      421 tttcggcgcg gcgccggcga gcggtgggtt tgcgccatgg gttcggtgaa atccaatatc
      481 ggccacctcg atgccgccgc gggtatcgcc ggattgatca aaactgtgct ggcgctaaag
      541 caccgtgaga ttcccgctac gttgcacttc gaaagagcca atccggaaat cgatctggat
      601 gcaagtccat tctatatcgt tgaccggttg cgaccttggc taactgatgg ggagcgtcgg
      661 attgccggcg tttcttcatt cggcattggc ggcaccaact gtcacatcgt attgcaggac
      721 gcggcgctcg ccgcaccgct tgccgttcag accgcgttgc ctgctcatct gctgactttc
      781 tccgctgcgt ccgcggccgc gttggacgaa ttggccggca gttaccggca atttcttgcg
      841 cagaatccca tggcggatct ggccggtatc gcagcggcaa gtcagaaaag ccgatcccat
      901 tattcccatc gcgcggcgat tgtcggtgcg tcggtgcagc agatgcgcga gagtttatcg
      961 caggaccgag gagcgggcga agtggaccgg cgttggctcg gcaaggccgt gacttccgcc
     1021 taccccgaga tcggctttct ctttgccggg cagggcacgc aatacgtcaa tatgggtcga
     1081 gagatttatc aagcgaaccg cgattttcgc acggtgctcg agcgctgcga tgagattttg
     1141 cgcgatcaac tggaacgacc gctgctcgac gtcatgttcg gtgcttctgg cgaactgatt
     1201 gagcgcaccg actatgccca gccggctctt tttgcgcttg aattcgcctt ggccgaactg
     1261 ctgcaatcgt ggggcatcaa accaaagttc gtcatgggtc atagcctggg cgagtatgtc
     1321 gccgcctgtg ttgcgggagt tttcactctt gaggacgggc tgcgattggc cgccgctcgc
     1381 ggccggttga tgcagcagct aaccggagcc ggcaagatgc ttgcggtcac cgccgagcaa
     1441 accattctcg atgcgctgtt gcgcaggttc ccggcggtag ctatcgcggc gatcaactcg
     1501 cccagtcaaa cggtgctttc cggcgcggcg gacgccatcg at
//
LOCUS       DATIRS010000448         2971 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_33890, whole genome shotgun sequence.
ACCESSION   DATIRS010000448 DATIRS010000000
VERSION     DATIRS010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2971)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2971)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2971
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33890"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..585
                     /gene="era"
                     /locus_tag="VLM90_05645"
     CDS             <1..585
                     /gene="era"
                     /locus_tag="VLM90_05645"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HSQ12477.1"
                     /translation="EEERIAETLRGVETPVLILINKIDLVSKGKLLPLMERCAQLLPD
                     KEIVPVSALKGDGVELVLSMVEKWLPEGPPFFTEGEYTDQSERFLASEIVREKVFLLT
                     REEIPYGVAVTIDDFTEKTEKNLIVIAATIHTERDSHKGILIGKRGAMLKEIGQQARE
                     ELEKIFGCRVFLELFIRVDPDWTQNPNSLAEMGL"
     gene            608..2023
                     /gene="der"
                     /locus_tag="VLM90_05650"
     CDS             608..2023
                     /gene="der"
                     /locus_tag="VLM90_05650"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HSQ12478.1"
                     /translation="MAQPASRELPRNLPIVAIVGRPNVGKSTFFNRLVGERRAIVDDL
                     PGVTRDRNYAEAIWAGRKFLLVDTGGLESETAGKLEENVQAQSHLAVAEADVIMFLLD
                     GKGGLNPLDAEAAGQLRQTDKPVFYAVNKLDSRQRENNLYEFYALGLDKLYSISAEHG
                     LGIPDLMDDVVQHLEPNIDSEADDAVKIPPPLRVAIVGRPNVGKSTLTNRLLGFERSV
                     VDATPGTTRDAVDTPFELRGEPCVLIDTAGIRRKARIDDRIERFSVSRSLNAVDRGDL
                     IIHIIDGPENVTDQDAQILSYAVQRGKAILLVVNKWDVVRQTGGDTDKYRDEINYRLA
                     FLEYVPIAFISAATGFGVRKMLDTAARLVQVYRRKVSTSSLNQALQEIVQAHTVPLFR
                     NHPVKFYYGTQTGVAPPTFTFFVNKPDGILESYQKYLVNQLRQHLGFINAPIRLHFRA
                     RREPSTIKRRGNSPKRSRSAK"
     gene            2216..>2971
                     /gene="dprA"
                     /locus_tag="VLM90_05655"
     CDS             2216..>2971
                     /gene="dprA"
                     /locus_tag="VLM90_05655"
                     /inference="COORDINATES: protein motif:HMM:TIGR00732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HSQ12479.1"
                     /translation="MIQPSLSFAEGLSSTATPGEHARWLALTRVKGLGCVSFKKLVAH
                     FGDPTRALAAAPSELAAVEGLQRDAIDGMLGFTQWAEVDSDLKRIRSAGITLVCYTDA
                     DYPARLRTIADPPPLLYVKGALTDADAKAVAIVGSRSASDYGRRVARDLARGLASFGF
                     TVVSGMARGIDGMAHETALSCHGRTIAVLGSGVERAYPPEHAKLYQRIAAQGAVISEL
                     PIGTKPLAFNFPARNRLISGLSLGVVVVEATEKS"
BASE COUNT          605 a          854 c          902 g          610 t
ORIGIN      
        1 gaagaggagc gcatcgccga gaccctgcgc ggcgtcgaga cgccggtgct gattctcatc
       61 aataaaattg atttagtttc caagggaaag ctcttgccgc tgatggagcg ttgcgcgcag
      121 ttgttgccgg acaaagagat cgtgccggtg agcgcgctca agggcgacgg cgtcgagttg
      181 gtgctgtcaa tggtcgagaa atggttgccg gaagggccgc cgttttttac cgagggcgag
      241 tacaccgatc agtcggagcg cttcctcgcc tccgagatcg ttcgcgaaaa agtgttctta
      301 ttgacccgtg aggagattcc ctacggcgtt gcggtgacca ttgacgactt caccgaaaag
      361 accgagaaaa atctcattgt catcgccgcg acgattcata ccgagcgcga ttcgcacaag
      421 ggcatcttga tcggcaaacg cggcgccatg ctcaaggaga tcggccagca ggcgcgcgag
      481 gagttagaga agattttcgg ctgccgggtt tttctcgaat tgttcattcg cgtcgatccg
      541 gactggacgc agaatcccaa ttcgcttgcc gagatgggat tgtgaaaaga tgatccagtc
      601 tttacccatg gcgcaacccg cgtcgcgcga actgccgcgc aatctgccga tagtcgccat
      661 cgtcggccgg cccaacgtcg gcaagtcgac gtttttcaac cggctggtgg gcgagcggcg
      721 agccatcgtt gacgatctgc caggcgtgac ccgcgaccgt aactatgccg aagcgatctg
      781 ggccggcaga aaattcttgc tcgtcgatac cggcgggctg gaatccgaaa ccgccggcaa
      841 gttggaagaa aacgtccagg cgcagagtca tttggcggtg gcggaagccg atgtcatcat
      901 gttcctgctc gacggcaagg gcggactcaa tccgttggac gccgaagcag cggggcagtt
      961 gcgccaaacc gacaagccgg tgttctacgc ggtcaacaag ctcgactcgc gccagcgtga
     1021 aaacaatctc tacgagttct acgccctcgg tttggacaag ctctattcga tctccgctga
     1081 acatggtttg ggcattcccg atttgatgga cgatgtggtg cagcatcttg agcccaacat
     1141 cgacagcgaa gcagacgacg ccgtgaaaat accgccgccg ctacgggtcg ccatcgtcgg
     1201 ccggcccaat gtcggcaaat cgaccttgac caatcgtttg ctgggcttcg agcgttcggt
     1261 ggtcgacgcc acaccgggga cgacccgcga tgccgtcgac actcccttcg aactgcgcgg
     1321 cgagccttgc gtgctcatcg ataccgccgg gattcggcgc aaggcgcgca tcgatgaccg
     1381 catcgaacga ttcagcgtca gccgctcgct taatgccgtg gatcgcggcg atttaatcat
     1441 tcatatcatc gacggcccgg agaacgtgac agaccaggat gcgcagatcc tgagctatgc
     1501 cgtgcagcgc ggcaaggcga tcttgttggt ggtcaacaag tgggatgtgg tgcggcaaac
     1561 cggcggcgac accgataaat atcgcgacga aatcaattac cgcttggcgt ttctcgaata
     1621 tgtgccgatc gcgtttattt cggcggcgac cggtttcggc gtgcgtaaaa tgctcgatac
     1681 cgcggcgcgg ctggtgcaag tgtatcggcg caaggtgtcg acttcgtcgc tgaatcaagc
     1741 gctgcaggag atcgtccagg ctcacaccgt accgcttttc cgcaaccatc cggtgaagtt
     1801 ttactacggc acgcagaccg gcgtggcgcc gccgacattc acgttcttcg tcaacaagcc
     1861 ggacggcatc ctggaaagtt atcaaaaata tctggtcaat cagctgcgcc agcatttggg
     1921 ctttatcaat gcgccgattc ggctgcactt tcgcgcccgg cgcgagccgt caacgattaa
     1981 acgaagaggc aactcgccca aacgatcgcg ttcggcaaaa tagtccatgg cagctagttt
     2041 ttgccggttg gcgcatgacc acaaactgcg ccatgcggta aaaagccttg taaaaacacc
     2101 agcatttact tgatcggcgg atcattttcg tctatcgcct agccttcgcc ggacatttat
     2161 tttatcattc gtgactcgtt ggtggggggc gtggtttgac aaagcgcgga cgaacatgat
     2221 tcagccttcg ttatcatttg ctgaaggact ctcatcgaca gccacgccgg gcgagcatgc
     2281 gcggtggctg gcattgacgc gcgtcaaagg actgggctgc gtgagcttca aaaaactcgt
     2341 cgcccacttt ggcgatccga cccgagcctt agcggcggcg ccgagcgagc tcgccgctgt
     2401 cgaaggcctg caacgcgatg ccatcgacgg catgctcggt tttactcagt gggccgaagt
     2461 cgacagtgat ctcaagcgca ttcgcagtgc cggcattacc ctggtgtgtt acaccgacgc
     2521 cgattatccg gcgcggctgc gcaccatcgc cgatccaccg ccgctgcttt acgtcaaggg
     2581 agctttgacc gatgccgacg ccaaggcggt ggcgatcgtc ggctcgcgca gcgccagcga
     2641 ctatggccgg cgcgtggcgc gggatctggc gcgcggcttg gcgtcctttg gcttcaccgt
     2701 cgtcagcggc atggcgcgcg gcatcgacgg catggcccat gagaccgcat tgagttgcca
     2761 cgggcgcacc atcgcagtgt tgggttccgg cgtcgagcgc gcctatccgc cggagcatgc
     2821 taagctttat cagcgcatcg ccgcacaggg cgcggtgatt tctgaattgc ccatcggaac
     2881 caagccgctg gcgttcaatt ttcctgcgcg aaaccggttg atcagcggct tgtcgctggg
     2941 tgtggtggtg gtcgaagcga cggagaaaag c
//
LOCUS       DATIRS010000449         1571 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_428000, whole genome shotgun sequence.
ACCESSION   DATIRS010000449 DATIRS010000000
VERSION     DATIRS010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_428000"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1571
                     /locus_tag="VLM90_05660"
     CDS             <1..>1571
                     /locus_tag="VLM90_05660"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSQ12480.1"
                     /translation="LIGGKKFNTKITATGTGWDMKVAPEVKAKDPKTYKIVGKPLKRF
                     EIPTKVTGEHDYIQNVRVPGMLHGRVVRPPVINTEPVSIDQESIKGIPGVVMTVREGK
                     FVGVVAKTEWSAIKAAQALKVTWSKPTSKVPGTAEELFAYLKNTKPSRTLKAVAKGDL
                     KSAFSQAKKTYQGAYRWPFQMHGMIGPSCSIADVQGDRATIWSGPQGPFRTRSTVATL
                     LGLKEQNVHLIYHEASGSYGRMSTDDGAEDAALLSRAAGAPVRVQWSRQDEHGWEPKG
                     PAHYDQAKAAVDSDGKLIGWEFQDYSQPWTASGSTPLLASLQVGILPTNPGGSNGTQS
                     SGAYYGVSNQLILAHHINWHFPEPIPLRTSNLRAPGDVARCFASESFFDEIAADLKVD
                     PVEMRLSHLTANKRAAECVKAAADKAGWQKRPSPAPATNTNSGNIAKGRGIALTDRSN
                     TYVAVVAEVEVNKTTGQVAVKKLVCAHDCGLMVNPDGVMNQVEGNVIQGVSRAMYEEV
                     MFDTNGGVTSLDWAT"
BASE COUNT          380 a          502 c          432 g          257 t
ORIGIN      
        1 aactgatcgg cggcaaaaag tttaacacca aaatcaccgc caccggcacc ggctgggata
       61 tgaaggtggc gccggaagtc aaagccaaag atcccaagac gtataagatc gtcggcaaac
      121 cgctcaaacg cttcgagatt ccgaccaaag tcaccggcga acacgactat atccaaaacg
      181 ttcgcgtgcc ggggatgctt cacggccgcg tcgtccgccc gccggtgatc aacaccgaac
      241 cagtgagcat cgatcaagag tcgatcaaag gcattcccgg ggtcgtcatg accgtccgcg
      301 aagggaaatt cgtcggcgtg gtggccaaga ccgagtggag cgccatcaaa gcggcgcaag
      361 ccttgaaagt cacctggtcg aaacccacca gcaaggttcc agggacagcc gaagagctct
      421 tcgcctatct aaaaaacacc aaaccgtcgc gcacactgaa agccgtggcc aaaggcgatc
      481 tcaaatcagc cttcagccaa gccaagaaaa cctatcaagg cgcctaccgt tggccgttcc
      541 agatgcatgg catgatcggt ccgtcatgct ccatcgccga cgtgcagggc gaccgggcaa
      601 ccatctggtc cggaccgcaa ggaccgtttc gcacccgttc cacggtagcg accctcctcg
      661 gtctcaaaga acagaacgtt cacctcatct atcacgaagc ttccggctcc tacggccgca
      721 tgagcacgga cgacggcgct gaagacgccg ccctgctctc gcgcgcggcg ggcgcgcctg
      781 tacgcgtaca gtggtcgcgt caagacgagc atggctggga gcccaaaggg ccggcccatt
      841 atgatcaagc gaaagcggcc gtggacagcg acggcaagct catcggttgg gagtttcaag
      901 actacagcca gccttggacc gcgtccggat cgacgccgct attggcctcg ctgcaagttg
      961 gtattctgcc caccaatccc ggtggttcca atggcacaca aagtagcggc gcatactacg
     1021 gcgtaagcaa tcaattgatt ctcgcgcatc acatcaactg gcactttcct gagccgattc
     1081 cgctccgcac cagcaaccta cgcgcccccg gcgacgtggc gcgctgtttt gccagcgaaa
     1141 gtttcttcga cgagatcgcc gccgatctta aagtcgaccc agtcgaaatg cggctgagtc
     1201 atttgaccgc caacaaacgt gcggcagagt gcgtaaaagc cgccgccgac aaagccggct
     1261 ggcaaaagcg cccgtcgccc gcgccggcca ctaacacaaa ctccggcaat attgccaaag
     1321 gccgcggcat cgcgctcacc gatcgatcca atacctacgt cgccgtcgtc gccgaggtcg
     1381 aagtgaacaa aaccaccggc caggtggcgg tgaaaaaact cgtctgcgcc catgactgcg
     1441 gcctgatggt caatccggac ggcgtcatga accaagtcga gggcaacgtc atccaaggcg
     1501 tcagccgcgc catgtacgaa gaggttatgt tcgacaccaa tggcggcgtt accagtcttg
     1561 actgggcgac t
//
LOCUS       DATIRS010000450         3515 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_722983, whole genome shotgun sequence.
ACCESSION   DATIRS010000450 DATIRS010000000
VERSION     DATIRS010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3515
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_722983"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1479
                     /locus_tag="VLM90_05665"
     CDS             <1..1479
                     /locus_tag="VLM90_05665"
                     /inference="COORDINATES: protein motif:HMM:NF005866.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase/succinate dehydrogenase
                     flavoprotein subunit"
                     /protein_id="HSQ12481.1"
                     /translation="LFDRTKEGLILQRDFGGHRYARLAHVGDRTGLEMIRTLQQHAVH
                     KGIDVYMECNLQRLLTDGGRVSGAFGYWRESGKFIMFKCKAVVLATGGGGKAWKVTSN
                     SWEYTGDGVTMAADAGADLMDMEFMQFHPTGMVWPPSVRGILVTEGVRGDGGTLKNTK
                     NERFMFNYIPDFFKAETAETIEEAERWYDDKRNNRRTPDLLPRDEVARAINSEVKAGR
                     GTPHGGVFLDIASRRPAEYIRKRLPSMYHQFKELADVDITKEAMEVGPTCHYSMGGVR
                     VDADSTATTVPGLFAAGEVAAGLHGANRLGGNSLSDLLVFGRRAGLYAAEYAKGLSGS
                     LSVNNDQVEMFAQTMLAPFETQGNENPYTIHSDLQECMQDLVGIIRVESELNQALEII
                     QKLKPRSLHVKVEGNRHYNPGWHLSLDLHSLLTFAEAATLAAIIRKESRGGHTRDDFP
                     NTDAKFAKVNIITRINNGEMTQSQEPLPEMPDELKALLEEKQ"
     gene            1479..2234
                     /locus_tag="VLM90_05670"
     CDS             1479..2234
                     /locus_tag="VLM90_05670"
                     /inference="COORDINATES: protein motif:HMM:NF009052.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HSQ12482.1"
                     /translation="MAEQQVHMRVWRGDANGGEFKDYRIAVGEGQVVLDVIHAIQAQQ
                     AGDMAVRWNCKAGKCGSCSAEVNGKPRLMCMTRMNTFQPGETITVAPMRTFPIIRDLV
                     TDVSYNYQKAKEIPAFKPKPKESDGTRRMYQEDIDRVQEFHKCIECFLCQNVCHVIRD
                     HDDNKPAFSGPRFFVRLASLEMHPLDTNDRMELIKQKAGLGYCNITKCCTEVCPEHIH
                     ITDNAIIPLKERVVDRYYDPIAKLMGLFSAKNK"
     gene            complement(2338..2856)
                     /locus_tag="VLM90_05675"
     CDS             complement(2338..2856)
                     /locus_tag="VLM90_05675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12483.1"
                     /translation="MADTESYSQQLRSLGQQLETLGMERFTVRLAADGYRVTGTKRYQ
                     PPAEEQTAKKLWQRVRRGAQSTVISPQPFESVELHFSAQDLAHIDVGAKQKRKETPDS
                     TDAHSLSQVFRAVGAIVEQKQGRFLAVIKEGQEIVIEYESVSKRNTVEKFTVSSLYDY
                     WVKMYLRRRERR"
     gene            complement(2957..>3515)
                     /locus_tag="VLM90_05680"
     CDS             complement(2957..>3515)
                     /locus_tag="VLM90_05680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12484.1"
                     /translation="GVVSISDLPFPEEVRGSARLDLTRGYAQELRAVGQALETLNLGD
                     FSVEPSGNGYRVTGASVAKNLSLVRSAGGALVASDPSVRVTPMDLNYSPGDVRRLERE
                     GQAQRRSTGQTSEANTLPQILRVIGGVVDQMRGHLVAVSKEAVIVRLDYQSASGQKVS
                     EDYTMPMLYDRWVRMYKRREPGGNQ"
BASE COUNT          795 a         1038 c          977 g          705 t
ORIGIN      
        1 ctcttcgacc gcactaaaga agggctgatt ctccagcgcg acttcggcgg tcatcgctac
       61 gcgcgcttgg cccatgtcgg cgaccgcacc ggcttggaaa tgatccgcac cctgcaacaa
      121 cacgccgtcc ataaaggcat cgatgtctac atggagtgca acctgcaacg gctattgacc
      181 gacggcggcc gcgtcagcgg cgcgttcggc tactggcgcg agagcggcaa gttcatcatg
      241 ttcaagtgca aagccgtggt gctcgccact ggcggcggcg gcaaagcctg gaaagtcacg
      301 tcgaactctt gggaatacac cggcgatggc gtcaccatgg cggcggatgc cggcgccgac
      361 ttgatggaca tggagttcat gcagtttcat ccgacgggca tggtctggcc gcccagcgtg
      421 cgcggcatct tggtcaccga aggcgtgcgc ggcgacggcg gcacattgaa gaacaccaag
      481 aacgaacggt tcatgttcaa ctacatcccc gatttcttca aagccgagac cgcggaaact
      541 atcgaagaag ccgaacgctg gtacgacgac aaacgcaaca accggcgcac ccccgatttg
      601 ctgccgcgcg acgaagtcgc ccgggcgatc aattcggaag tcaaggccgg ccgcggcacg
      661 ccccatggcg gcgtcttcct ggacatcgct tcgcgccgtc cggccgaata catccgtaag
      721 cggctaccgt cgatgtacca tcaatttaag gaactggcgg atgtcgacat cactaaggag
      781 gcgatggaag tcggcccaac ctgccactat tccatgggcg gcgtgcgtgt cgacgccgac
      841 agcacggcga ccaccgtccc cggcctattc gccgccggcg aagtcgccgc cggtctccac
      901 ggcgccaatc gcctgggcgg caactcgctc tccgacttgc tggtattcgg tcggcgcgcc
      961 ggtctctatg ccgcggaata tgccaagggg ctgagcggat cgttgagcgt aaataacgac
     1021 caggtagaaa tgttcgctca aaccatgctg gcgcccttcg agacccaggg caacgagaat
     1081 ccttacacga ttcattccga cctgcaggag tgcatgcagg acttggtcgg catcattcgc
     1141 gtcgagtcgg aattgaatca ggcgctggaa atcattcaaa agctcaaacc gcggtccttg
     1201 catgtgaaag tcgaaggtaa tcggcactac aatccgggtt ggcatttgtc gctggattta
     1261 cattcgctat tgaccttcgc cgaagcggcc acactggccg cgatcatccg taaagagagc
     1321 cgcggcggtc acacgcgcga cgactttccc aacaccgacg cgaaattcgc caaggtcaac
     1381 atcatcacgc gcattaacaa tggcgaaatg acccagtccc aggagccgct gccggaaatg
     1441 ccggacgaac taaaggcact gcttgaggag aaacaataat ggctgagcaa caggtccata
     1501 tgcgggtgtg gcgcggtgac gccaatggcg gtgagttcaa agactaccgc attgccgtgg
     1561 gtgaaggaca ggtggtgctc gacgtcatcc atgcgatcca ggcgcagcaa gcgggcgata
     1621 tggcggtgcg ttggaactgc aaagccggca aatgcggctc atgtagcgcc gaggtcaacg
     1681 gtaaaccgcg gctcatgtgc atgacgcgta tgaacacgtt ccagcccggc gagaccatca
     1741 cggtagcgcc gatgcggacc ttcccgatca tccgcgatct cgtcaccgac gtatcgtata
     1801 actatcaaaa ggccaaagag atcccggcgt tcaaaccgaa accgaaagaa tccgacggca
     1861 cgcgccgaat gtatcaggaa gacatcgacc gggtacagga attccacaag tgcatcgagt
     1921 gtttcctatg ccagaatgtt tgccatgtta ttcgcgacca cgatgacaac aagccggctt
     1981 tttccggacc gcgctttttc gtccgcttgg cgtccttgga aatgcaccct ctcgacacca
     2041 atgatcgcat ggagttaatc aaacagaagg ccgggttggg ctactgcaac atcacgaagt
     2101 gttgcaccga agtctgcccg gagcatattc acatcaccga taacgccatc atcccgctca
     2161 aagaacgggt cgtcgaccgc tactacgacc cgatcgccaa gctgatgggg ctgttctccg
     2221 cgaagaataa gtaaatctcg aggggcggcg cgcgcagtat cgaatctgcg cgccgcatct
     2281 ggtccaatat ccctatcagg gacgtagaat ggccgcagct cttgaatggg ctaaggtcta
     2341 gcggcgctct cggcggcgga gatacatctt cacccagtag tcataaagcg acgatacggt
     2401 aaatttctcg acggtgtttc gtttggagac cgactcgtat tcgatgacaa tctcttgacc
     2461 ttccttgatc accgcgagaa atcgcccctg cttctgttcg acaatggcgc cgacggctcg
     2521 gaaaacttgc gacagcgaat gggcatcggt actgtctggc gtttctttcc gcttctgttt
     2581 ggcgccgaca tcgatatggg ctagatcttg cgccgagaaa tgcaattcga ccgactcaaa
     2641 cggttgagga gagattacgg tagattgggc gccgcggcgg actcgttgcc ataatttttt
     2701 tgccgtttgt tcctcggctg gcggttgata acgcttggtc ccggtaaccc gatagccatc
     2761 ggccgcaagg cgcacggtaa accgctccat gccgagggtt tccaactgtt gaccgagcga
     2821 tctgagttgc tgcgagtagc tctctgtatc ggccattttg ttatatccca ggtcgactat
     2881 tggcaccgtg aaagagtttg atcctaacga acttggaatt ttctaagctg gtaatagacc
     2941 acgagggccg gaaaaactat tgatttccac ccggctcacg cctcttgtac atgcgtaccc
     3001 agcggtcgta cagcatcggc atcgtgtaat cttcagaaac tttttgcccg ctggcggact
     3061 gataatctag cctgacaata accgcttctt tggacacggc tacgaggtgc ccgcgcattt
     3121 gatcgacaac gccgccgata acacgcagaa tctgcggcag agtgttggct tcggaggtct
     3181 gccccgtgct acgccgttgg gcctgccctt cgcgctccaa gcgtctgaca tcgccaggcg
     3241 aataattcag gtccatgggt gtcactcgaa cactgggatc actagctacc agtgcgccgc
     3301 ccgcacttct aaccaaactc aggttcttag ccacggaagc gccggtgacg cgatagccat
     3361 tgccagacgg ttcgacgcta aaatcaccaa gattgagggt ttccagggct tgcccgactg
     3421 cccgcagctc ctgcgcatac cccctcgtca aatccaaccg agcacttcca cggacttcct
     3481 caggaaacgg cagatccgat atactcacaa cgcct
//
LOCUS       DATIRS010000451         3489 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1706344, whole genome shotgun sequence.
ACCESSION   DATIRS010000451 DATIRS010000000
VERSION     DATIRS010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3489)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3489)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3489
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1706344"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            379..732
                     /locus_tag="VLM90_05685"
     CDS             379..732
                     /locus_tag="VLM90_05685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12485.1"
                     /translation="METTNNRRLTMSRIKNLVIGGLMAGALIASSGCAVSDSPWHNYG
                     RERPNFGRIERSELRADYARLEAARARLAYDLRHNASRYRIAQDRAEIQAILDEIERD
                     NRYSWNSNRGWDRRD"
     gene            complement(1066..2463)
                     /locus_tag="VLM90_05690"
     CDS             complement(1066..2463)
                     /locus_tag="VLM90_05690"
                     /inference="COORDINATES: protein motif:HMM:NF013086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HSQ12486.1"
                     /translation="METMQTEVLIVGAGLAGFTAAVRASEQGAKVLLVDKSRGELGDG
                     NVLMASGSLRAGGKSPKTGAQELYDFVMAEGVGYPDLVNSWSQTCGRAIDWLQTVGVA
                     IQETAPGRIWLNQKSEISFGPVYKKDVGPRAIASLKQRFLNLGGSYLNGIEGVSLIVE
                     NNRVVGLIGKRDGESVELRARATILTTGGFAANKELVKQYIGAHADRCKLRGSKQDTG
                     DGLRMALQAGAKAVNLKYFYGHLIARKALTDDRFWPYPRLDSFVDEGVLVDGNGNRFV
                     DEGRGDVAVANELSRTDDPTGATLVFDGESWAASKSSPSSTSLAIPAPNPWILDNGGE
                     LFCDDTVAGLAIKLAVDATNLSQTIESYNRAVSANDSKSLPVIRTGNPKVLRAPFYGL
                     RVVSGITFTMGGIAIDGKGQALNQKDQPIAGLYAAGDAIGGLMGGYRGGYTGGLMQAI
                     VTGILAGENAARLGG"
     gene            complement(2605..3255)
                     /locus_tag="VLM90_05695"
     CDS             complement(2605..3255)
                     /locus_tag="VLM90_05695"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12487.1"
                     /translation="MDSGRAAVQDAGESQRQKIALSGGVGGTNHVALTIALERSGFNP
                     KDYTMVAIPGQQLQILYSLESGFVDAALMSPPHIFAAAKKGFNKLMDVGARVEMPGGG
                     LTAMVKTVQERPAEVRRVIRALQVAKDEVRKSKPKTVELIMRLLKMDKDGAADTYDAF
                     QTTLNPSGIPNRPGIDNLVRSLQAQGRFTDRKVNFAEVADDRLATEVAKELGYKLP"
     gene            complement(3156..>3489)
                     /locus_tag="VLM90_05700"
     CDS             complement(3156..>3489)
                     /locus_tag="VLM90_05700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12488.1"
                     /translation="NAGLTITALPLLAARDWGTFNANGLDVEIIVMSPPIGGAAMAQG
                     DIDYVAGVGPASVAATLTGLPSRAIWFSSDRISYWIQAAPQYKTLENLKGKRSPYPAA
                     SVAPTMSR"
BASE COUNT          695 a          971 c         1047 g          776 t
ORIGIN      
        1 gatatcttcg tcgtgccgtc gtggatgtgg cactcgcacg agaacaccat gagcgacgac
       61 gcgatgctgt tttcgatcag cgatcggccg tccaccgaag cgctagggtt gtttagggaa
      121 gagggcgagt gatgacaacg acatgtaaaa cgtgctggtc catgggacgc agctgaccac
      181 acaagttagc gctactccgc cggcactcat cgccggtcaa aaacggatgc caaagggatg
      241 cagaaagctg catccctttt ttattggcat gttacgccat cttggagtgc acgtgccgtt
      301 tatgggccga ttcatggcca gcgtataaac tttttgcgcc gtacgcgtct aagtaggtaa
      361 gaggagtcga ggcggatgat ggaaaccact aacaatagga gattgacgat gagccgtata
      421 aaaaacctgg tgattggtgg cctaatggca ggagcgttga tcgcctcatc cgggtgtgcg
      481 gtatctgata gcccctggca taattatggc cgggagcgcc ctaatttcgg ccgaatagag
      541 cgcagcgagt tgcgcgccga ctatgcccga ttggaagcag ccagggcgag gctcgcctat
      601 gacctacgcc acaacgctag ccgatatcgc atagcccagg atcgcgcgga gattcaggcg
      661 attttggatg agatcgagcg tgataaccga tactcttgga attccaatcg tggctgggat
      721 cgtcgcgact gagagcacga cgaccacagt cgccgctaac tcacaactag attaggccgc
      781 cggaattcca atccggcggc ccaacttttt ttttgccctt ttcggtaaac tcggagcgaa
      841 acgtttgtcg ctcgcctatt gaacctgccg gtgacgccga tctttttgcc ttttaaatct
      901 tgcagtgtct tgaatttcgg cagcgagtaa gaaacttttc ggacgaaact cagacggcgt
      961 ccggcgtcga ccagcagcat agtgagcatg ccgacgattc gcgcgccacg gcgacagagt
     1021 aatagttgtc gctttatcgc tttctcctac gcagcagcga atttctcagc cacccagtcg
     1081 agcggcgttt tcgccggcca agattccagt cacgatcgct tgcatcaggc cgccggtgta
     1141 gccgccgcga tagccgccca tgagtccgcc gatggcgtcg ccggcggcat agagaccggc
     1201 gatcggttgg tctttttgat tgagcgcttg gcctttgccg tcgatggcaa tcccgcccat
     1261 ggtgaaggtg atgccggaga ccacccgcag cccatagaag ggcgcacgca acactttcgg
     1321 attgccggtt cgaattactg gcaacgactt ggagtcattc gcgctaaccg cgcgattgta
     1381 ggactcgatg gtttgactca agttggtggc gtcgacggct agttttatcg ctaagcctgc
     1441 aaccgtgtcg tcgcaaaata actcgccgcc gttatcgagg atccagggat tgggcgcggg
     1501 gattgccaat gacgtcgaag acggcgaact cttcgacgct gcccatgatt cgccgtcgaa
     1561 gaccaaagtc gcgccggtgg gatcgtcggt gcgggaaagt tcgttggcga cagcgacatc
     1621 accgcgccct tcgtcgacaa agcggttacc gttgccatcg actaaaactc cttcatcgac
     1681 gaaagagtcc aagcgcggat agggccagaa gcggtcgtcg gtgagcgctt tgcgcgcgat
     1741 caagtggccg tagaaatatt ttaggttgac cgctttggcg ccggcttgca gcgccatgcg
     1801 cagaccatcg ccggtgtcct gcttggagcc gcgcagtttg cagcggtcgg cgtgggcgcc
     1861 gatgtattgc ttgacgagtt ctttgttggc ggcgaagccg ccggtggtaa gaattgtcgc
     1921 gcgggcgcgc agttcgacgg actcgccgtc gcgtttgccg atcaggccga cgactcggtt
     1981 gttttcaacg atcaggctga cgccttcgat gccattgaga taactgccgc cgagattgag
     2041 aaaacgctgc ttaagactcg cgatggcgcg cgggccgaca tcttttttgt agacaggtcc
     2101 aaaggagatt tcgctcttct ggttgagcca gattcttcct ggcgcggttt cttggatggc
     2161 gacaccgacg gtctgcaacc agtcgatggc ccggccgcag gtctgcgacc aggagtttac
     2221 caggtcggga tagccgacgc cttcggccat gacgaagtcg tagagctctt gagcgccggt
     2281 ttttggactt ttgccgccgg cgcgcagact gcccgacgcc atcaagacgt tgccgtcgcc
     2341 caactcgccg cggcttttgt cgacaagcaa gaccttggcg ccttgctccg acgcgcgcac
     2401 cgcagcggtg aagcccgcga ggccggcgcc gacgataaga acctcagttt gcattgtttc
     2461 catggtattc tcttgtttgg gataaatttt taccacgaag acacgaaggg cacgaagttc
     2521 ggagaataat tcgtctctaa ccttcgtgaa cttcgtgtct tcgtggtgag atcctctatt
     2581 tcatatcaga gacgaagtgc acaattacgg cagtttgtaa cctaattcct tggccacttc
     2641 cgttgctagc cggtcgtcgg cgacctcggc gaaatttact ttgcggtcgg tgaagcgccc
     2701 ctgggcttgc agcgaacgca ccaggttgtc gatgccgggg cggttgggga tgccgctcgg
     2761 attcagcgtc gtctggaacg cgtcataagt atccgcggcg ccgtccttgt ccatcttcaa
     2821 tagccgcatg attaactcga cggtcttggg tttggatttg cgcacttcgt ctttggcgac
     2881 ttgcagggcg cggatgacgc gcctgacttc ggccggccgc tcttgcacgg ttttcaccat
     2941 ggcggtcagg ccgccgcccg gcatctcgac cctggcgccg acatccatga gcttgttaaa
     3001 gccttttttc gctgcggcga agatatgcgg cggcgacatc agcgcggcgt cgacgaaacc
     3061 ggattccagg gaatagagga tttgcagttg ctggccgggt atggcgacca ttgtgtagtc
     3121 tttcgggttg aagcccgatc tttctaacgc aatcgtcagc gcgacatggt tggtgccacc
     3181 gacgccgccg gatagggcga tcttttgcct ttgagattct ccagcgtctt gtactgcggc
     3241 gcggcctgaa tccagtaaga gatccggtcc gacgaaaacc agatggcccg cgacggcaaa
     3301 ccggtgaggg tagcggccac cgatgccggc ccgacgccgg cgacgtaatc gatatccccc
     3361 tgagccatcg ccgcgccgcc gatgggcgga ctcatgacga tgatttcaac atcgagacca
     3421 ttggcgttga atgtgcccca atcgcgcgct gccaatagcg gcagcgcggt gatggtcaga
     3481 ccggcgttg
//
LOCUS       DATIRS010000452         2070 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_231140, whole genome shotgun sequence.
ACCESSION   DATIRS010000452 DATIRS010000000
VERSION     DATIRS010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2070
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_231140"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..281)
                     /locus_tag="VLM90_05705"
     CDS             complement(<1..281)
                     /locus_tag="VLM90_05705"
                     /inference="COORDINATES: protein motif:HMM:NF024874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSQ12489.1"
                     /translation="MNRIIALLLLLAWAFSGTAHAACRELDVARGWPRPAHAAEPDAT
                     IEFFGHNFFQITSNKGTKVITDPVAPGFYPTPSVAPHAITVGREHPNHN"
     gene            complement(291..995)
                     /locus_tag="VLM90_05710"
     CDS             complement(291..995)
                     /locus_tag="VLM90_05710"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ12490.1"
                     /translation="MDQANLDVNAGEFLVIVGESGCGKTTTLRLIAGLEQPDSGTIFI
                     GGAPVNDVPVGRRGVQMIFQNYALWPHMRVFDADRYSNLSLPLRVRQWSADKINEFLR
                     PLAWKIGIDESHFKRKPSELSGGQQQRVALGRAMVTSPTVMLMDEPLSNIDPPNRLKM
                     RQEIMAFHKEHRLTTLYVTHNLADGIALADRIAVMRSGRFEQADTVENLMRNPATEYV
                     ADFFKADQFAFKVGAP"
     gene            1176..1928
                     /locus_tag="VLM90_05715"
     CDS             1176..1928
                     /locus_tag="VLM90_05715"
                     /inference="COORDINATES: protein motif:HMM:NF015057.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing redox enzyme family protein"
                     /protein_id="HSQ12491.1"
                     /translation="MPGLLGPEELIADLQHALQQRHPRPHPVRQLLLSGRLTKEQIQW
                     WARNQFHEFRNIHRFFGVRYQKCPVPELRRMLLENMVEEEGDDLFGGKYTRHRDLWVQ
                     FAEGIGIERDDILYYEPLPGIRAALEMYVSLVQQSHWAVAIGTGLVFEGGGPKRMKEE
                     REALEKYYPWIPATCLDFFRAHEYHDEGHGNMVIDVIKQHCMEEKLQQEMREAVRQRA
                     DIMWLQNDCIYNAFVRPSLAAETIREIEGRLE"
BASE COUNT          459 a          552 c          637 g          422 t
ORIGIN      
        1 taattgtgat tggggtgctc ccggcccacc gtgatcgcgt gcggcgctac gcttggggtc
       61 ggataaaatc ccggcgctac gggatcggtg atgactttag tgcccttgtt cgacgtgatt
      121 tgaaaaaaat tgtggccgaa gaattcgatg gtcgcgtctg gctcagcggc gtgcgccggt
      181 cgcggccagc cgcgcgcgac atcgagttca cggcaagcgg catgggcggt gccgctaaat
      241 gcccacgcca aaagcagtaa tagggcaatg atccgattca tcacgcgctc ttatggcgct
      301 ccaactttga aagcaaactg gtcggctttg aaaaaatcgg cgacgtattc cgtcgcggga
      361 ttgcgcatca agttttccac ggtgtcggcc tgttcgaagc ggccgctgcg catgaccgct
      421 atacggtccg ccagggcgat gccgtcggcg agattgtggg ttacgtaaag cgtcgtgaga
      481 cgatgttcct tatgaaaggc cattatctcc tggcgcatct tgagccggtt gggcggatcg
      541 atgttgctga gcggctcgtc catcaacatg accgtcggcg aggtgaccat agcgcgtccc
      601 agggcgacgc gctgctgctg cccgccggaa agctcgctgg gtttacgttt gaagtgactc
      661 tcgtcgatgc cgatcttcca ggcgagcgga cgcaagaatt cattgatctt gtcggcgctc
      721 cattgccgca ctcggagagg aagagagagg ttggaatagc ggtcggcatc gaagacacgc
      781 atgtgcggcc acagagcgta gttttgaaag atcatttgca cgccgcgccg gccgacggga
      841 acgtcattga ccggcgcgcc gccgataaag atcgtgccgc tgtcgggctg ttcgagtcca
      901 gcgatcaggc gaagcgtcgt ggttttgccg cagccgctct cgccaacgat caccaggaac
      961 tcgccggcgt tgacatcgag gttggcttgg tccaccgcga ggacggcacc gaatcttttc
     1021 gtcagtctgc gcagggaaag cgaaaccatg aatccatgct agtcaagggc ggctcaaaaa
     1081 acaacatgaa accgcgctgg cgaagcgcct tggacttggc tatgatcgcg ccgagaagaa
     1141 atggcgccac tcaacgcgca atcgtgggag gatctatgcc tggtttgctc ggacctgaag
     1201 aactgatcgc cgatctgcaa catgcgttac aacagcggca tcctcgacct catcccgtcc
     1261 gccagctctt gctgagcggc aggctgacca aggaacagat ccaatggtgg gcgagaaatc
     1321 aatttcacga gtttcgcaac atccatcgct tcttcggcgt ccgctatcag aagtgtccgg
     1381 tgccggagtt gcgccgcatg cttctggaaa acatggtgga agaagagggc gatgatctgt
     1441 tcggcggcaa gtatacaaga caccgcgatt tatgggttca attcgccgag ggcatcggca
     1501 tcgagcgaga cgatattctg tattatgagc cgctgccggg aattcgcgcc gcattggaaa
     1561 tgtacgtctc tttggttcag caaagccact gggccgtggc catcggcacc ggccttgtgt
     1621 tcgaaggcgg cgggcccaaa cgaatgaaag aggagcgcga agcgctggaa aaatattatc
     1681 cgtggattcc ggcgacctgc ctggattttt tccgcgccca cgaatatcac gacgaaggcc
     1741 acggcaacat ggtcatcgac gtgatcaaac agcactgcat ggaagaaaag ctccagcagg
     1801 aaatgcgcga ggcggtcagg cagcgcgccg acatcatgtg gctgcagaac gactgcatct
     1861 acaacgcttt tgtcaggcca tcactggctg cggagacgat ccgggagata gaagggcggt
     1921 tggaatgacc gttcaagggt tcaaggttca aaagttcaag gacggagacg gcgccgcctt
     1981 actctggcga gaattgtttt tagagtcatt tcgagcagca gagtgtatga aaaccccgtt
     2041 catggttcga cgaagctcac cgcgaacggg
//
LOCUS       DATIRS010000453         1856 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_919359, whole genome shotgun sequence.
ACCESSION   DATIRS010000453 DATIRS010000000
VERSION     DATIRS010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1856
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_919359"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(49..1410)
                     /gene="pcaB"
                     /locus_tag="VLM90_05720"
     CDS             complement(49..1410)
                     /gene="pcaB"
                     /locus_tag="VLM90_05720"
                     /EC_number="5.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR02426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047472 - 3-carboxy-cis,cis-muconate
                     cycloisomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-carboxy-cis,cis-muconate cycloisomerase"
                     /protein_id="HSQ12492.1"
                     /translation="MTTPLDSTIFGPLFGAEEINGLFSDQTYVRALVDVEIALARAEA
                     LVGVIPATAAEQIAAVTADKIDVAALTKGTLRSGFPIIALVQELRKQVSADAAPYIHW
                     GATTQDIMDTASVLQLRGAIQIFDKRIREIAGHLAALAEKHRSTVLAGRTHSQQALPI
                     TFGLKVAGWLAPLLRHAGRLAEIQPRLLVVQFGGAAGTLAALGGSGLAVMQALANELK
                     LGTPAMPWHTQRDGFVEFGGWLSLVTGSLAKMAQDVILMAQTEVAEVGESAEEGRGGS
                     STMPQKSNPITSELIVGAARMNASLLSALHNAQIQEHERGTHGWQVEWLTLPQMVTLT
                     GGALKHAAYLAKNLQVDEAAMLANISRANDVILAEAAVFALAKAMPRPKAEALVKRAC
                     VIAVSENKPLIETVEKLAGDSFRVGEVDWQALAKPDNYLGETDNIIDRVLKGSTKTGG
                     RVF"
     gene            complement(1589..>1856)
                     /locus_tag="VLM90_05725"
     CDS             complement(1589..>1856)
                     /locus_tag="VLM90_05725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12493.1"
                     /translation="GPVPGNDDTVQAPHVNVVIFARGMLVHAFTRIYFDDEAANASDP
                     VLLSIKNKARRRTLIAQRGERDGKAVYRFDIRLQGGNETVFFDM"
BASE COUNT          385 a          588 c          492 g          391 t
ORIGIN      
        1 gttgaaatct cggagggcgg acatcagtgt ccgccttctt tcggcgggtt agaaaacccg
       61 cccgcctgtt tttgttgaac ctttgagcac tcggtcgata atattgtcgg tctcgccgag
      121 atagttatcc ggtttcgcca acgcctgcca gtcgacctcg cctactctga acgaatcgcc
      181 ggccaatttc tctactgttt cgattagcgg cttattctca gacacggcga tcacacatgc
      241 tctctttacc agcgcttcgg ccttcggccg tggcatcgct ttggccaagg cgaacaccgc
      301 tgcttcggcg agaatcacat cgttggcgcg ggaaatattc gccagcatgg cggcctcgtc
      361 gacctgcaaa ttcttagcga gataagccgc atgtttcaaa gcgccgccgg taagcgtgac
      421 catctgcggc agcgtcaacc actccacctg ccagccatga gtgccacgct catgttcctg
      481 aatctgcgcg ttgtgcagcg ccgaaagcaa agatgcgttc atgcgcgccg cgccgacgat
      541 caactcgctg gtgattggat tggacttctg cggcatggtg ctgctgccgc cgcgcccttc
      601 ctccgccgac tcgccgacct ctgccacttc ggtctgcgcc atgaggatga catcctgcgc
      661 catcttggca agggaacctg taaccaaact gagccagccg ccgaactcga cgaagccatc
      721 gcgctgcgta tgccacggca tcgccggcgt accaagcttc aattcgttgg ccaaggcctg
      781 catgaccgcc aagccactac cgccaagcgc cgccaaggtt cccgccgcgc cgccgaactg
      841 caccaccagc aaccgcggtt ggatttccgc caatcgccca gcatggcgca agagcggcgc
      901 caaccaaccg gcgaccttta aaccgaaggt gatcggcaac gcctgctggc tatgagtgcg
      961 cccggccaga acagttgacc gatgcttctc ggccagcgca gccaaatggc cggcgatctc
     1021 gcggattcgt ttgtcgaata tttgaatcgc cccgcgcagc tgcaacacgc tggccgtgtc
     1081 catgatatct tgtgtcgtcg caccccagtg aatgtacggc gccgcatcgg cgctcacttg
     1141 ctttcgcagc tcctgcacca gagcgatgat cggaaagccg gaacgaaggg ttcccttggt
     1201 cagtgcggca acatcgatct tgtcggctgt caccgcagcg atctgctccg ccgctgtggc
     1261 tggaatgact ccgaccaacg cctcggcgcg ggccagggca atttccacgt ccactagcgc
     1321 gcgaacatag gtttgatcgc tgaagaggcc gttaatttcc tcagcaccga acaacgggcc
     1381 gaaaatagtg gaatccagcg gcgtggtcat gcgtgtggtt taggctaaat ctaaaactag
     1441 tgactgtcct gttctgtcat tccgaacgaa cgtgaggaat ctatcttccg tagcctcaac
     1501 gatatcgact taccgtacaa gagaaagatt tctccctttg gtcgaaatga cagaaagacg
     1561 gctcacgaaa gccgctaaca tccttgcctc acatatcgaa gaaaaccgtc tcatttccgc
     1621 cttgcagccg aatgtcgaaa cggtagacgg ccttaccgtc ccgctcgccg cgctgcgcga
     1681 tcaacgtccg acgtcgcgcc ttgttcttga tcgataacaa cactgggtca ctggcattcg
     1741 cggcttcgtc gtcgaagtaa atccgcgtaa aagcatgcac caacatgccg cgggcaaaga
     1801 tcactacgtt gacgtgcggc gcttggactg tgtcgtcgtt tccaggaacc ggaccc
//
LOCUS       DATIRS010000454         2286 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_525595, whole genome shotgun sequence.
ACCESSION   DATIRS010000454 DATIRS010000000
VERSION     DATIRS010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2286
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_525595"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..300
                     /locus_tag="VLM90_05730"
     CDS             <1..300
                     /locus_tag="VLM90_05730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12494.1"
                     /translation="YSHILERRNNNAIVKGGGLVERWKRKQRAELGMKTAEKDFQTEV
                     HAVADEDHSDIFEPIFQRYVDSESAAQAVLAATRDGLLIDRALRGALADAMLAVE"
     gene            390..1481
                     /locus_tag="VLM90_05735"
     CDS             390..1481
                     /locus_tag="VLM90_05735"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSQ12495.1"
                     /translation="MADTPVTAEDEVKERVAYVSPYEQWKKDEGLPTYRGLAIKDVNA
                     VELAPWKSSGEGMAAFLNLEGTGGFNDSYIAEIPPGKSLKAHRHLFEETIYILKGQGA
                     TSVWIDPTKKETFEWQEGSYFAIPMNAWHEHHNASGLDSARYIAMTSAPRVIDTFNNH
                     EFVFENPFVFKDRYNSEEGYFKQAAPAQQWATNFVADVRVCETYSGGFDRGGGAKSTV
                     FRMVKQTVKSHVSHWGVGAYKKAHRHGPGIHVLIIRGTGYSILWHENKPLERVEWGPG
                     SVFVPPEMWFHQHFNGSAEPVFFLAIGWGSDKPKAGGKAYVYKSVKEGGDQIEYEDED
                     PQIHAEFEVAMKKAGARCKMDYHPHCTMK"
     gene            1516..>2286
                     /locus_tag="VLM90_05740"
     CDS             1516..>2286
                     /locus_tag="VLM90_05740"
                     /inference="COORDINATES: protein motif:HMM:NF024739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12496.1"
                     /translation="MAPRKLLAYSVTSLLLICPLFSSAHAASIEALYSEINKLPPAQR
                     QKRLEDGARKEGGFKFYGISAASLLAAYTAGFMKRYPFIKAEYWRGSGNKLVFRTLTE
                     HRAGQLDTDAVLVGTENVMALKRSGIWERYYSPESVNFGKEYTDKDGFWHADSLGVST
                     LGYNTKLVKKEEAPKGYDDLFDARWKGSLSIDLEPERALMGWLTAWGEQKTRAFVDGL
                     IKHGAIVRRGHTQQAQLLCAGEFKVAVEIYPDGLLRMKQ"
BASE COUNT          530 a          602 c          708 g          446 t
ORIGIN      
        1 tactcgcata tcctcgaaag gcgcaacaac aacgccatcg tcaaaggcgg cggtttggtc
       61 gagcgctgga agcgcaagca gcgggcggag ctcggaatga aaaccgcgga aaaggatttc
      121 cagaccgaag ttcacgcggt ggctgacgag gatcattcgg atatcttcga gccgatcttc
      181 caacgctacg tcgacagcga atcggcagcc caggccgtgt tggcggcgac ccgcgatggc
      241 ttgctgatcg accgcgcctt gcgcggcgcc ctcgccgatg cgatgttggc agtggaatga
      301 ggatcgatgg gagatcggac ataggcacat aggtgatcgc ttatttttca taagcattaa
      361 tgagtttaat caaaacggag gaaacaaaca tggcagacac accggtcacg gcggaagatg
      421 aagttaagga aagggttgcg tatgtttcgc cctacgaaca gtggaaaaaa gacgaaggct
      481 tgccgaccta tcgcggtttg gcgattaaag acgttaacgc ggttgagtta gcaccctgga
      541 agtccagcgg tgagggcatg gcggcgtttc tcaatctaga gggcaccggc ggctttaacg
      601 attcctatat cgcggaaatc ccgccgggga aatcgctcaa ggcgcaccgc cacttgttcg
      661 aggaaaccat ctacattctc aaaggccagg gcgcgacttc ggtgtggatc gacccgacca
      721 agaaagaaac cttcgaatgg caagagggca gctatttcgc gatcccgatg aatgcttggc
      781 atgagcatca caacgcgtca ggtttggatt cggcgcgcta catcgccatg accagcgcgc
      841 cgcgggtgat cgacaccttc aacaatcacg aattcgtatt cgagaatccg tttgtcttca
      901 aagaccgtta caactctgag gaaggttact tcaagcaagc cgccccggcg cagcagtggg
      961 cgaccaactt tgtcgccgac gtgcgcgtgt gcgagactta ttcaggcggt ttcgatcgcg
     1021 gcggcggcgc caagagcacg gtgtttcgca tggtcaagca gacggtgaag tcccacgtct
     1081 cgcactgggg cgtcggcgcc tacaagaaag cgcaccgcca tggtccaggc atccatgttt
     1141 tgatcatccg cggcaccggc tactcgatcc tctggcatga aaacaaaccg ttggagcgcg
     1201 tcgagtgggg ccccggcagc gtgttcgtgc cgccggaaat gtggtttcac cagcacttca
     1261 acggcagcgc cgagccggtg ttctttctcg ccatcggttg gggcagcgac aaaccgaaag
     1321 ccggcggcaa ggcttatgtt tacaagagcg tcaaggaagg cggcgatcag atcgagtacg
     1381 aagacgaaga tccgcagatc cacgccgagt tcgaagtggc gatgaagaaa gcgggcgcgc
     1441 gctgcaagat ggattatcat ccgcattgca cgatgaagtg aatctgggtc gaggatagac
     1501 gatggaggat tgaagatggc gccgaggaaa ttgctggcct attcggtgac ttcattgctg
     1561 ttaatttgtc cgctgttctc aagcgcccat gccgcgtcta tcgaagcgct ttacagcgag
     1621 atcaacaaac tgccgccggc gcagcggcaa aagcgccttg aggacggcgc gcgcaaggaa
     1681 ggcggtttca agttttacgg catttccgcc gcctcgttgc tcgccgctta tacggcaggc
     1741 ttcatgaagc gttatccgtt catcaaggcg gagtactggc gcggcagcgg caacaaactg
     1801 gtgtttcgca ccctgacgga gcaccgcgcc ggccagctcg ataccgacgc ggtgctggtc
     1861 ggcacggaaa acgtcatggc gctcaagcgc tcgggcatat gggagcgcta ttattcaccc
     1921 gagtcggtga atttcggcaa agagtacacg gataaggatg gtttttggca tgccgatagt
     1981 ttgggcgtgt cgaccctggg ctacaacacc aagctggtca agaaagaaga ggcgccgaaa
     2041 ggctacgacg atctcttcga cgccaggtgg aagggcagtc tctccattga tttggaaccg
     2101 gagcgggcgt tgatgggatg gttgaccgct tggggcgagc agaagacccg cgccttcgtc
     2161 gacggattga tcaaacatgg cgccatcgtg cggcgcggcc atacgcagca ggcgcagctc
     2221 ttgtgcgccg gtgagttcaa agtcgccgtg gaaatttatc cggatgggct attgcgcatg
     2281 aagcaa
//
LOCUS       DATIRS010000455         2201 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1509684, whole genome shotgun sequence.
ACCESSION   DATIRS010000455 DATIRS010000000
VERSION     DATIRS010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2201
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1509684"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            14..448
                     /locus_tag="VLM90_05745"
                     /pseudo
     CDS             14..448
                     /locus_tag="VLM90_05745"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
     gene            500..1549
                     /locus_tag="VLM90_05750"
     CDS             500..1549
                     /locus_tag="VLM90_05750"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSQ12497.1"
                     /translation="MNLVGEGEENALGKSWSGVKAKETLKAALDAAGWQSPKRANVGR
                     GVAMYERGTGAGKVWVNLTAELDGSLTVFTVAGDQGTGLQTVLCQTVAAEMQVPYEQV
                     RCRIGNTADVSYSVDVGFGGSRSTNINSAAAFQASAELRKKLNAQAAQLLGCAEDQVV
                     YKSGQFSSKGSKRKLLTLSEVVNSTDAPIAVSVETEVLRKGSSTSFIAQVAEVEVDRD
                     TGRVKLTNFVSAHDVGTIINPLGHQGQIDGEAIMAIGSGLMEELTHDQGKVTTTNLGE
                     YKIPNILDIPKFKTVLVKGKNGPGPYEAKGIGEHANVTPPAAIANAVQDACGVRIFDT
                     PVTAEKVYAALHGKA"
     gene            1598..>2201
                     /locus_tag="VLM90_05755"
     CDS             1598..>2201
                     /locus_tag="VLM90_05755"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12498.1"
                     /translation="MNDFSCRWRNIFYSLSVLLMISASAAQAQDKIRIAYSSTDTLNQ
                     LWTIPLETGFYKKNGLDVDMVYIGSTTVGISAIVAQDISIGNAAGSGVANANVRGADT
                     VSVGCMINVLAYELVVLDSIKSPEDLKGKSIGISRFGSVSDVAARELLRGMGLRPMDD
                     VKILQVGGAAERAAGFSRGVIAGFPSPPGNVHLTPSGVPYR"
BASE COUNT          484 a          599 c          705 g          413 t
ORIGIN      
        1 gttcgccaag gccgtgggca tcgcgccgaa acagattcac ctgcaagcgg ttcatgtcgg
       61 cgccgacttc ggcggcaaga gcggcgcggg cgagttaccg atttgttact ttctcgccaa
      121 acaggccaag cggcccgtga agatcgtgct ttcccacagc gaagaaatga cggcgatgaa
      181 tcccgatcac tacaccgtgg ttaaggttaa aaccggcgtg aagcgcgacg gccggatgac
      241 cgcccgttat ctgcaagcga tccatggcac cggcgcctac gccggcatga agccggggcg
      301 cgccagcatc ggcggcgccg gttcggcgac gccgtaaaag atcgacaaca gctacatgga
      361 agcgttgcag gtttacacca ataccgtgcc ttgcggtttc tggcgcgcgc cgggggcgat
      421 tcaagcggtg ttcgcctctg agtcgcatat ggacctgatc gccaaagaat tgaaaatgga
      481 cccggccaag ttccgcatga tgaatctggt cggcgaaggc gaagagaatg ccttggggaa
      541 atcttggagc ggtgtaaaag ctaaggaaac cttgaaagcc gcgctcgacg ccgccggctg
      601 gcaatcgccc aagcgcgcca acgtcggccg cggcgtggcc atgtacgagc gcggcaccgg
      661 cgccggcaaa gtgtgggtca acctaacggc tgagctcgat ggcagcttaa ccgtgttcac
      721 cgttgccggc gatcagggca ccggattgca gaccgtgctt tgccagacgg tcgcagcgga
      781 gatgcaagtg ccctacgaac aggtgcgctg ccgcatcggc aacaccgcgg atgtttccta
      841 cagcgtcgat gtcggtttcg gcggcagccg ctcgaccaat attaacagcg cggcggcgtt
      901 tcaagcgtcg gctgaattgc gcaaaaaact caacgcgcag gcggcgcagt tgctcggctg
      961 cgcggaagat caggtggttt acaagtcggg ccagttttcc agcaagggta gtaaacgcaa
     1021 gttgttgaca ttgagtgagg tggtgaattc gacggacgcg ccgatagccg tcagtgtcga
     1081 aaccgaagtg ctgcgcaaag gctcgtcgac ttcgttcatc gctcaagtgg ctgaggtcga
     1141 agtcgatcgc gacaccggcc gggtgaagct gactaatttt gtcagcgccc acgatgtcgg
     1201 cacgatcatc aatccactag gtcatcaggg acagatcgac ggcgaggcga tcatggcgat
     1261 cggcagcggc ctgatggagg agctcaccca cgatcaaggc aaggtgacga ccaccaactt
     1321 gggtgagtac aagattccca atattctcga tattccgaaa ttcaaaaccg tgctggtcaa
     1381 aggcaaaaac ggtcccgggc cctacgaagc gaaggggatc ggcgaacacg ccaacgtgac
     1441 gccgccggcg gcgattgcca acgccgtgca ggatgcctgc ggcgtgcgga tattcgacac
     1501 accggtgacg gcggaaaaag tctatgcggc gctgcacggg aaggcgtgag gcttgaggcg
     1561 agaggcgtga gtatgacagg gaaataacgg agggactatg aacgatttca gttgtcgctg
     1621 gcgcaatatt ttttattctc tttcggtcct gctgatgatc tcggccagtg ctgcgcaggc
     1681 gcaggataag attcggatcg cctacagttc cacggatacg ctgaatcaat tgtggacgat
     1741 tccacttgag accgggttct acaaaaagaa cggactcgat gtcgacatgg tttatatcgg
     1801 cagcacgacg gtcggtatct cggcgatcgt ggctcaggat atctcgatcg gcaacgcggc
     1861 cggcagcggt gtggccaatg ccaacgtgcg cggcgccgat acggtcagcg tcggttgcat
     1921 gatcaatgtt ttggcttacg agttggttgt actcgacagc atcaagtcgc cggaagacct
     1981 caagggaaaa tccatcggca tcagccgttt cggcagcgtt tccgacgtcg ccgcgcggga
     2041 gttgctgaga ggaatggggc tgcggccgat ggacgatgta aaaatattgc aggtcggcgg
     2101 ggcggcggag cgggccgcag ggttcagccg cggagtgatc gcgggatttc catcgcctcc
     2161 gggcaacgtg catcttactc cctccggcgt tccctatcgc a
//
LOCUS       DATIRS010000456         1740 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_723313, whole genome shotgun sequence.
ACCESSION   DATIRS010000456 DATIRS010000000
VERSION     DATIRS010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_723313"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(213..1493)
                     /locus_tag="VLM90_05760"
     CDS             complement(213..1493)
                     /locus_tag="VLM90_05760"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12499.1"
                     /translation="MDEPDSTPANEKLAWPIALLVQLRAFEALRHRDYRLLWYGQVFG
                     SMGTWMDQVTRGWLIYELTDSALQLGLVRGIQAIPFLLLSPIAGSAADRYPRKFQVVF
                     AQFASGFLYAVTAALVLSGWIRPWHVYVTAFLMACVQVFLQPSRSAMISDFVPQKTLT
                     SAIGLNAMVFNTARSTGPALAGILISHFSTGISYAVQALFMILATVWTTQLSKVAPGA
                     PGSHGGHEESFGQSIIEGWKFSWRTPEVRTGILIVIVAALFMIPFSTLLPVFARDLLH
                     VGARGQGLLLTAMGIGALCSSILIASVGDRLPRGLLMLGGVALYGVLVVIFSLCHWFP
                     LSMGLMAIIGLCHVSSHALVQTVIQTYSPPEFRGRAIAIFHMTQVLLLVGGMLVGALS
                     AVLGAPWAASSMAIAGTLCMVAIFVTVPRARDIR"
BASE COUNT          449 a          545 c          473 g          273 t
ORIGIN      
        1 gcccggttga tttgacggaa actccggcgc gcaaatcatc gcaaggcgga caacttactt
       61 gccacacaat cgctggtcat ttaatcggcc gcgcctgcgc aagggtcaga tatatgccgg
      121 acagcaaaac catgccagcg atacttatca aagtcgccgc ccatcactcc acggctcgat
      181 cgcgctgcca cgccgatgac ggcaacggct ggctaacgaa tatcgcgcgc ccgcggcacc
      241 gtcacgaata tcgccaccat acacagcgtg ccggcgatag ccatggacga tgccgcccag
      301 ggcgcgccga gcaccgcgga aagcgcgcca acgagcatgc cgccgaccag caacaatacc
      361 tgggtcatgt ggaaaatcgc gatggcccgg ccgcgaaact ccggcggcga ataggtttga
      421 atgacggtct gcaccaaggc atgggagctg acatggcaca agccgatgat tgccatcaac
      481 cccatcgata acggaaacca atggcacaga gaaaagatca ccaccagcac gccgtaaagc
      541 gcgacacctc cgagcatcag tagaccgcgc ggcaatcggt cgcccaccga agcgatcaag
      601 atcgagctgc acagggcgcc aatccccatg gccgtgagca gcaagccctg cccgcgcgct
      661 ccaacatgga gcaagtcccg ggcaaagacg ggcagcagcg tgctgaatgg aatcatgaac
      721 aaagcggcga caatcacgat cagaatgccg gtgcgcacct ccggggtgcg ccagctgaat
      781 ttccagcctt cgatgatgct ctggccgaag gactcctcgt gaccgccatg gctgcccggc
      841 gcgcccggcg ccaccttgct caattgcgtc gtccaaactg tggcgagaat cataaacagc
      901 gcttgcaccg cataggaaat tcctgtgctg aaatgagaaa tcaatatccc cgcaagcgcc
      961 ggcccggtgc tgcgcgccgt attgaacacc atggcattca aaccaatcgc gctggtcaag
     1021 gttttttgcg gcacgaaatc cgagatcatt gccgagcgcg aaggttgcaa aaacacctgc
     1081 acgcaggcca tcaaaaacgc cgtcacatag acatgccacg gccgaatcca cccgctaagc
     1141 accagcgccg ccgtcactgc atataggaag ccgctggcga actgcgcgaa caccacttga
     1201 aacttgcgcg gataacggtc cgccgcgcta ccggcgatag gtgacaacaa taaaaatgga
     1261 atcgcctgga taccgcgcac caagccaagc tgcagcgccg agtcggtcag ctcgtaaatc
     1321 agccagccgc gcgttacctg atccatccag gtgcccatgg aaccaaaaac ctgaccatac
     1381 cagagcaaac ggtaatcgcg atggcggagc gcttcgaagg cgcgcagctg aactaaaagt
     1441 gcaatcggcc aagcgagttt ttcattggca ggtgttgaat ccggttcatc catcatcggc
     1501 gaaactgcta ttcggtcagg tcaagctgtc taatggaacg attgcgaatc ggccgaaagc
     1561 gacgaggggt ctcgaagtcc taaagccaaa gctcgacagt atcacgcacg cggggagcgt
     1621 ccaacgcgcc agcaaaaact tcttaccgaa tttgccgcgc ctcgcgccta atgcgcgccg
     1681 atcaacacag ccaaaccgcc gatgaatatg gtgtcgatga cgagaatcgc ctgggttatg
//
LOCUS       DATIRS010000457         2769 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_919671, whole genome shotgun sequence.
ACCESSION   DATIRS010000457 DATIRS010000000
VERSION     DATIRS010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2769
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_919671"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            248..1861
                     /gene="urtB"
                     /locus_tag="VLM90_05765"
     CDS             248..1861
                     /gene="urtB"
                     /locus_tag="VLM90_05765"
                     /inference="COORDINATES: protein motif:HMM:TIGR03409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter permease subunit UrtB"
                     /protein_id="HSQ12500.1"
                     /translation="MITPCWCRAAALTVILFTSAAWAYAIDGATAKQLGAEDGDAKLA
                     AIQKLVAAGDAAAIPILKALQDDTLVLVNGRLAIVDGSGAKDALSGEPIVAPADKREA
                     IMINNRIRAALDGTIAALKLVSSNRDERLAAARAVAGDPSDEMLPLIKTALSKESDDE
                     VKRLLNQARSLVEIKSGDAALRRDAVNLLGSSDNPQAKQIISRLLEKNSDGSFIETDA
                     GVRAAATTALRAIERRSLLPQIAATLFSGLSLGSVLLLAALGLAITFGLMGIINMAHG
                     EMLMLGAYTTYVAQTLFRAYLPNWLDWYIAAAVPMAFAVAALVGIVLERTVIRFLYGR
                     PLETLLTTWGISLMLTQSVRSLFGAQNVEVANPAWMSGGFSLGADVVLPYNRVVIILF
                     AAFVVFLVWLFLTRTRLGLYVRAVTQNRTMADCMGIPTPRVDWLTFGLGSGIAGLGGV
                     ALSQIGNVGPDLGQSYIVDSFMVVVLGGVGQLAGTIIAAIGLGEINKFLEPFTGAVLG
                     KIFVLIIIILFIQKRPQGLFALKGRMAES"
     gene            1863..>2769
                     /gene="urtC"
                     /locus_tag="VLM90_05770"
     CDS             1863..>2769
                     /gene="urtC"
                     /locus_tag="VLM90_05770"
                     /inference="COORDINATES: protein motif:HMM:TIGR03408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter permease subunit UrtC"
                     /protein_id="HSQ12501.1"
                     /translation="MDSQVAPANSFYSRPAWFGLGIFSAVVLIVIPLLRLLLPAENPL
                     HLSDYYLLMIGKIMCYAIVALAMDLIWGYVGILSLGHGLFFALGGYSMGMYLMREIGA
                     EGQYRSNLPDFMVFLDWKEFPWYWAGSEYFTLTLLKILLVPGLLAFVFGWFAFRSRIK
                     GVYFSIITQALTFAFMLLFFRNDTGFGGNNGFTDFKRIMGFSLAHPGTRVTLFAVTGL
                     VLILTLLLCRYIVTSKFGRVLAAIRDAESRTMFSGYNTRDYKLFAWTLSALLCGLAGA
                     LYVPQVGIINPSEMQPSNSIEMAIWV"
BASE COUNT          507 a          833 c          795 g          634 t
ORIGIN      
        1 agccaaaccc tggagcccct acatcgctgg taatgacaag aaaaaagacg aacctgaaat
       61 catcgcgaaa aagaaataga cccgacagca gcgccgggaa ctcgatgcag tttccggcgc
      121 tgctcaatcc gcggtcgttg agattcccac aaaggtctgg caagttgcgg taaaattctc
      181 tcggggcccc tcgaagggtc gaagcacgtt cagtttattt catcagtatg cgagagcagc
      241 tcacccaatg atcacaccgt gctggtgtcg agccgcggca cttaccgtca ttctgttcac
      301 cagcgctgcc tgggcctatg ccatcgatgg cgcgacagcc aagcagctcg gcgccgaaga
      361 tggcgacgct aaacttgccg cgatccagaa gctggttgcc gccggtgatg ccgccgcgat
      421 cccgatattg aaagcgctcc aagacgatac ccttgtgctg gtgaacggcc gcctggcgat
      481 cgtcgatggc agcggggcca aggacgcgct tagcggcgag ccgattgtcg cgccggcgga
      541 caaacgcgaa gcgatcatga tcaataaccg gattcgcgcc gccctcgacg gcaccatcgc
      601 cgcgctcaag ctggtttcat ccaatcgcga cgagcgcctg gcggcggcgc gggcagtggc
      661 cggcgatccc agcgacgaaa tgctgccgct gatcaagacc gccctcagca aagaaagcga
      721 cgacgaagtg aagcgcttgc tcaaccaggc acgctcactc gtggaaatca aaagcggcga
      781 tgccgcactg cgccgcgacg ccgtgaattt actgggcagc agcgacaatc cccaggcgaa
      841 acagatcatc agtaggctgc tggaaaaaaa ctcggatggc agttttatcg aaaccgatgc
      901 cggcgtccgg gccgcggcga ccacggcgtt gcgcgccatc gagcgccgct cgctcttgcc
      961 gcagattgcc gccacgctgt ttagcggtct gagcctcggc agcgtgctat tgctggccgc
     1021 cctcggtcta gcgatcacct tcggtttgat gggcatcatc aacatggccc atggcgaaat
     1081 gctcatgctc ggcgcctaca ccacctatgt cgcccagacc ttgttcagag cttatttgcc
     1141 caactggctg gactggtata tcgccgcggc ggtgccgatg gcgttcgcgg tggcggcgtt
     1201 ggtaggcatc gtgctggagc gcaccgtcat tcgttttctc tacggccggc cgctggaaac
     1261 cttgctcacc acctggggca tcagcttgat gctgactcag tcggtgcgct cgctgttcgg
     1321 cgcacagaat gtcgaggtcg ccaatccggc ctggatgtcg ggcgggttca gtctcggcgc
     1381 cgatgtcgtg ctgccttata accgcgtcgt gatcattttg ttcgctgcgt tcgtggtatt
     1441 tctagtctgg ctttttctca cccgcacaag actcggtctt tacgtccgcg ccgtgacgca
     1501 aaaccgcacc atggccgatt gcatgggcat cccgacgccg cgcgtcgact ggctcacctt
     1561 cggtcttggc tccggcatcg ccggtctggg cggcgtggct ttatcccaga ttggcaacgt
     1621 cggtcccgac ctgggccaaa gctatatcgt cgattcgttc atggtcgtgg ttctgggcgg
     1681 cgtcggccaa ttggccggca ccattatcgc cgccatcggc ttgggcgaga tcaataaatt
     1741 tttagaacct ttcaccggcg ccgtgctggg gaagattttc gtcctgatca tcatcatcct
     1801 gttcatccag aaacggcccc aaggattgtt cgccttgaag ggacgcatgg cggagagctg
     1861 agatggattc acaggtagcg ccagcgaatt cgttctacag ccgcccagcc tggttcggcc
     1921 ttgggatttt ttcagccgtc gtgttgatcg tcataccttt gctgcgtttg ctgctgccgg
     1981 cggaaaaccc gctgcacctc tccgattatt acctgctcat gatcggcaag atcatgtgtt
     2041 acgccattgt cgccttagcg atggatttaa tttggggcta tgtcggcatc ctctccctcg
     2101 gccatggttt gttcttcgcc ctgggcggtt actcgatggg catgtatctc atgcgcgaga
     2161 tcggcgccga agggcagtat cgcagcaact tgcccgactt catggttttt ctcgactgga
     2221 aagagtttcc ctggtattgg gccggcagtg agtatttcac actgacacta ttgaaaatcc
     2281 tgctcgtgcc cggtttgttg gcgttcgttt tcggctggtt tgcctttcgc tcgcgcatca
     2341 aaggcgtcta tttctcgatc atcacccagg cgctgacctt tgcgttcatg ctgctgtttt
     2401 ttcgtaacga cacgggattt ggcggcaata acggcttcac cgacttcaaa cggatcatgg
     2461 gattctccct ggctcatccc ggcactcgcg ttaccctgtt tgcggttacc gggttggttc
     2521 tgatcctgac cctgctgctg tgccgctaca tcgtcacttc caagtttggc cgggtgctcg
     2581 cggcgattcg cgacgccgag tcgcgcacga tgttttccgg ctacaatacc cgcgactaca
     2641 aacttttcgc ctggacactg tcggcgctgt tgtgcggtct tgccggggcg ctctacgtgc
     2701 cccaggtggg catcatcaat cccagcgaga tgcagccgtc caactccatc gagatggcca
     2761 tctgggtgg
//
LOCUS       DATIRS010000458         1744 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_132564, whole genome shotgun sequence.
ACCESSION   DATIRS010000458 DATIRS010000000
VERSION     DATIRS010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1744
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132564"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..801)
                     /gene="recA"
                     /locus_tag="VLM90_05775"
     CDS             complement(<1..801)
                     /gene="recA"
                     /locus_tag="VLM90_05775"
                     /inference="COORDINATES: protein motif:HMM:TIGR02012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HSQ12502.1"
                     /translation="MDANREKAIDLAISQIEKQFGKGAIMKLGEGGIVKDVQTISTGS
                     LGLDIALGIGGVPCGRVVEIYGPESSGKTTLALQIVAEAQKSGGMGAFIDAEHALDLG
                     YAQKLGVKTDDLLVSQPDHGEQALEIAETLVRSGAIDVLVVDSVAALVPKAEIEGEMG
                     DSHMGLQARLMSQALRKLTATIARSHTVVIFINQIRMKIGVMFGNPETTTGGNALKFY
                     ASVRMDIRRIGALKDGDNIIGGRTRVKVVKNKMAPPFKEAEFDILYGTG"
     gene            complement(812..1384)
                     /gene="thpR"
                     /locus_tag="VLM90_05780"
     CDS             complement(812..1384)
                     /gene="thpR"
                     /locus_tag="VLM90_05780"
                     /inference="COORDINATES: protein motif:HMM:TIGR02258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008664 - 2'-5'-RNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HSQ12503.1"
                     /translation="MIRAFIAVEVAPTTIASITSAIAELKPKLPAIRWVAPANFHLTL
                     KFLGDIEANQVDALGAALQRALAPFPRCTINAKGLGVFPGLRQAKILWVGFFGDGLAR
                     LAANIDRALLALEFSAEPREFTPHLTIGRWRHVDRPALNLEQELHRWRDRDFGATIVD
                     RVSLFQSVLKPTGAVYSQLKVIMLNDQAID"
     gene            complement(1395..>1744)
                     /locus_tag="VLM90_05785"
     CDS             complement(1395..>1744)
                     /locus_tag="VLM90_05785"
                     /inference="COORDINATES: protein motif:HMM:NF014517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HSQ12504.1"
                     /translation="FLGAAITYSNAEKIRALGVDPATLDRVGAVSRDTALEMAQGIRQ
                     RTGATIGLSVTGVAGPSGGSADKPVGTVWVSICRDNFHQARLLNLMVLTDRERIVQGT
                     AQAALNWLRQVLS"
BASE COUNT          332 a          514 c          515 g          383 t
ORIGIN      
        1 acctgtgccg tagagaatat cgaactcagc ttctttaaat ggcggcgcca ttttgttttt
       61 gaccactttg acccgggtgc ggccgccgat aatgttatcg ccgtctttga gcgcgccgat
      121 gcgccggata tccatgcgca ccgaggcgta gaacttgagg gcgttgccgc cggtggtggt
      181 ttcggggttg ccgaacatga cgccaatctt catgcggatc tggttgatga aaataaccac
      241 cgtgtgcgag cgagcgatgg tggcggtgag ctttctcaac gcctgcgaca tgaggcgggc
      301 ttgcaaaccc atgtgcgagt cgcccatctc gccctcgatt tcggctttgg gcaccaaagc
      361 ggccaccgag tcgacgacta aaacatcgat ggcgccgctg cgcaccaggg tctcggcgat
      421 ttccaaagcc tgctcgccat gatccggttg cgaaacgagt aaatcatcgg tcttcacgcc
      481 gagtttctgg gcatagccga gatccagggc atgctcggcg tcgatgaaag cgcccatgcc
      541 gccgctcttc tgggcttcgg cgacgatctg cagcgccagg gtggttttgc cggaagattc
      601 tggtccgtaa atctcgacca cgcggccgca gggtacgccg ccgataccga gcgcgatgtc
      661 gagtcccagg gagccggtgg aaatggtctg cacgtctttg acgatgccgc cctcgccgag
      721 cttcatgatc gcacccttgc cgaactgttt ttcgatctga cttatcgcga ggtcgatcgc
      781 cttctcccga tttgcatcca tttcctgcct cctaatcgat tgcctggtcg ttaagcataa
      841 ttactttcag ttgtgaataa acggccccag tgggcttgag cacgctttgg aataagctca
      901 cccggtcgac gatggtcgcg ccgaaatccc ggtcgcgcca gcgatgcaat tcctgctcga
      961 gattaagcgc cggccggtcg acgtggcgcc agcggccgat ggttagatgc ggtgtgaatt
     1021 ctcttggttc agcggaaaat tccagcgcca atagcgctct atctatgttt gccgccaacc
     1081 gtgctaaccc gtctccgaaa aatcccaccc acaaaatttt tgcttgtctc agtccgggga
     1141 atacccctag acctttagca tttatggtgc agcgcggaaa gggggcgagc gctcgttgca
     1201 gggcggcacc gagggcatcg acctggttcg cttcgatgtc gcccaggaac ttgagggtaa
     1261 ggtgaaaatt cgccggcgcg acccaacgga tagccggcaa tttgggtttc aactcggcga
     1321 ttgccgaggt gatgctggcg attgtcgtcg gcgcgacttc cacggcgata aatgcgcgga
     1381 tcatgacccg cttctcacga aagcacttgg cgcagccagt tcaacgctgc ttgggcggtg
     1441 ccttgcacga tccgctcccg atcggtcagg accatgagat tgaggagtct cgcttggtga
     1501 aagttgtccc ggcagatgct cacccagacg gtgccgaccg gcttgtccgc actgccgccc
     1561 gatgggccgg ccaccccagt aacgctgagt ccgatggtgg cgccggtgcg ctgacggata
     1621 ccctgcgcca tttccaacgc ggtatctcga ctgaccgcgc cgacacgatc caatgttgcc
     1681 ggatcgacgc ccagggcgcg aatcttctcg gcgttggaat aagttattgc cgcgccgaga
     1741 aagt
//
LOCUS       DATIRS010000459         2467 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1608072, whole genome shotgun sequence.
ACCESSION   DATIRS010000459 DATIRS010000000
VERSION     DATIRS010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2467)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2467)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2467
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1608072"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(633..1946)
                     /locus_tag="VLM90_05790"
     CDS             complement(633..1946)
                     /locus_tag="VLM90_05790"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12505.1"
                     /translation="MTSRAAIGRNFFSNISSRIFYGWRMVGLVSLIRVVGGGLHQFGF
                     TVFFLPISQDLGLTRAMTSLAFSLSRAQGAIEAPLVGHLIDRYGPRPIIVTAVFLAGV
                     GYILLSWVDSYAGFLTVYLGVICLAFVAGFIHSPLVVANSWFIRQRARAMTVVSAAVP
                     LGGALISPLLAMGVASIGWRWAAFASGCIFLAICLPLSFQLKRSPESMGMLPDGESAP
                     AADADSPNEAANPSAVADVTSRQAMKTWIFWLLVFSMTARVTCYSTATVHFVPLMVWK
                     GLSEGAAASLLGAFAFINLVAHFVLGWIADRVNKPKLLAACHLLPALSLPPLLAESGY
                     WQLLLFTITFTFLDASFPIIWATVGDFFGRRNFATIRGMMSFFYMWGSFAGPVMAGAI
                     YDRTQSYFIVLWILLGLLLFSTLLVLFLIRPWTRRMAALVPADGT"
     gene            complement(2174..>2467)
                     /locus_tag="VLM90_05795"
     CDS             complement(2174..>2467)
                     /locus_tag="VLM90_05795"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSQ12506.1"
                     /translation="QLANELAPDIRVNGVAPSGTATNLRTASSLAGNNQAAPSVFGAG
                     RSGGPATNLLELNIAPEDHAAAYVLLASSQSKTMTGTVLHTDAGRGVTSFSSR"
BASE COUNT          588 a          705 c          748 g          426 t
ORIGIN      
        1 actcttctat cgggcggctc ggccgttcgt cgcaccgtcg cgcggcgcgt tggttgcgaa
       61 aacgcagcaa ctgaaacgta cacggcaacg ctgggttatg tttttcggcg tggagcctta
      121 aagcgctagc tggaatccgc gttcgtcttg ggcgcgatcg tgttgcgcag gacgccgacg
      181 actcaatttc aacgatatcc cctggagata gcgcgccgga aaaccgttgc ggatcgcctc
      241 gccgatggag ccgccggtaa ccgtgcctcg gccgagaggt cggggagcgt cgcgtcttgc
      301 cttgcgacaa atatgtgatt gcaagaataa tggtgtccat cagcagtacg catgacagag
      361 ccaaccgcat cgggaaatca catgggcgag agtgtcaaga aacagttgcc gatccctatc
      421 ggtaaaaaaa ctctctgcct ggcactgccc cgatactgac atgatagacc gtggccgggg
      481 aattctagcc gaaggggccg cgccatgagt accgctgagc aaacctcgag cttgagcgct
      541 ttgcagatca gatgactgcc ggtggttcgc gcgatggatc gtttcctccg aatgtgtctc
      601 tctataacat caatttcgtc cgagtggtcg ttctatgtgc catcggccgg aacaagggcc
      661 gccatgcgtc tcgtccaagg ccggatgaga aaaagaacca ataacgttga gaacagcagc
      721 agacccagca agatccacag gactatgaaa taactttggg tacggtcgta aattgcgccg
      781 gccatgaccg gaccggcaaa gcttccccac atatagaaga aactcatcat gccgcggatg
      841 gtcgcgaaat tgcgccgtcc gaaaaaatct cccacggtcg cccagatgat cggaaacgag
      901 gcgtccagaa atgtgaacgt aatggtgaaa agcaaaagct gccaatagcc cgactccgcc
      961 aacagcggcg ggagggaaag cgccggcaga agatggcacg ccgccagaag tttgggtttg
     1021 ttcacccggt cggcgatcca gccgagcacg aaatgcgcga ccaggttgat aaacgcgaac
     1081 gcgccgagaa gggaagcggc ggcgccttcc gataatccct tccacaccat gagcggaaca
     1141 aaatgcacgg tggcggtgct gtaacaggtg acgcgcgcgg tcattgaaaa aaccagcagc
     1201 cagaaaatcc aagtcttcat cgcctgacgg ctggtgacgt cggcgaccgc gcttgggttc
     1261 gcggcttcgt tgggtgaatc ggcatccgcc gccggcgcgc tttcaccatc gggaagcatg
     1321 cccatgcttt ccggcgagcg cttcaactga aagctcaaag gcaaacatat ggctaaaaaa
     1381 atacagcccg aggcaaatgc cgcccaacgc cagccgatgg acgccacacc catcgccagc
     1441 agcggcgaga tcagcgcgcc gccgaggggc acggcggcgc tgacgacggt catggcgcgc
     1501 gcccgctggc gaatgaacca actgttcgcc actaccaaag gcgagtgaat gaacccggca
     1561 acaaacgcga ggcaaatcac gccgagatag acggtgagaa aaccggcata gctatcgacc
     1621 catgacagca agatgtagcc aacgcccgcg agaaaaaccg ccgtcacgat gatcgggcgc
     1681 ggtccgtagc gatcgatgag atggccgacc agcggcgcct cgatggcgcc ctgtgcgcgc
     1741 gacagggaga acgccaagga agtcatggcg cgggtaaggc cgagatcctg gcttatgggg
     1801 agaaagaaaa ccgtgaagcc gaactgatgc aaaccgccgc cgacaacacg gatgagcgaa
     1861 accaatccca ccatgcgcca gccgtaaaaa atgcgcgagg aaatattaga aaagaaattg
     1921 cgaccgatgg cggcgcggga agtcacggtg ccgacgttat gtgaacgatg ggtcggcggt
     1981 caaggcatga aacgcgcgag cacttaatcc tcaggggcgg gtcggccgta tgttatctac
     2041 tccctcatgc ggagagcggg ctttctgacg ccgcattcgc gcccgccatc cggcccaggc
     2101 cgaggcattc gccgagattg ccgctccact tcgaattcgg cagcggctgt tacaccgcca
     2161 ctgggacgaa gggtcatcgg ctactgaagc tcgtaactcc gcggccggca tctgtgtgca
     2221 gcacggttcc cgtcatggtt tttgactgag atgacgccag aagcacgtac gcggccgcat
     2281 gatcttcggg ggcgatgttg agttcgagta gattagtggc cggcccaccg ctacgacccg
     2341 caccgaacac gctgggtgcg gcctgattgt ttcctgcaag cgaagacgcg gttcttagat
     2401 tggttgcggt tccagaaggg gccacgccgt ttactcggat atctggcgcc agttcgttgg
     2461 ctagctg
//
LOCUS       DATIRS010000460         3040 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_34450, whole genome shotgun sequence.
ACCESSION   DATIRS010000460 DATIRS010000000
VERSION     DATIRS010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3040
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34450"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            399..683
                     /locus_tag="VLM90_05800"
     CDS             399..683
                     /locus_tag="VLM90_05800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12507.1"
                     /translation="MQSDASSDDSALLIRDILIHVIKHPEAKDTAEGIHKFWLSAQTA
                     HQSRDKVREALKYLSEQKRWLTQKNAGAAVTLYGLDKDRVDEIKEFLRAR"
     gene            714..2267
                     /locus_tag="VLM90_05805"
     CDS             714..2267
                     /locus_tag="VLM90_05805"
                     /inference="COORDINATES: protein motif:HMM:NF016845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath C-terminal domain-containing
                     protein"
                     /protein_id="HSQ12508.1"
                     /translation="MAVAATYPGVYIEEIPSGVRTITGVATSIAAFVGWAAKGPTDRA
                     ELLLSWSDYDRKFGGLDRRSLLGYAVSQFFANGGQRAYIVRLAMTGSATAADNAVAAN
                     ETLDGKLKIIANNPGKWGNDYAAIVRARPVPDSDRFQLRIAKLQADGTGLTVEAYDNL
                     SMAATDPRFVVNVLKDESVLVHGEIVGGATTPPADTTIPTSGVIPAAAKLKSGQDGKV
                     VPPTDPDIELAAQPASGVGGVFHLDRIDLFNLLCVPGETKPAEVQKLEKFCRDRRAFL
                     IADSVATATVTSLQNGPDANITGDNAINAAFYFPWVLAPDPLQQNRLAEFPPCGFAAG
                     LYARTDSNRGVWKAPAGTEASLVGVSGVKIVLTDGENGVLNPKGVNCLRSLPVYGTVL
                     WGARTLRGNDEVGSEWKYVPVRRTALFIEESLFRALKWVVFEPNDEPLWAQIRLNVGA
                     FMHDLFRQGAFQGRSPRDAYFVKCDSETTTQNDINRGVVNILVGFAPLKPAEFVIVQI
                     QQMAGQIQV"
     gene            2284..2808
                     /locus_tag="VLM90_05810"
     CDS             2284..2808
                     /locus_tag="VLM90_05810"
                     /inference="COORDINATES: protein motif:HMM:TIGR02241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HSQ12509.1"
                     /translation="MAQFSVNTSRFDPYKNFKFRVKWDGKYVAGVSKVGALKRSTEVV
                     EHREGGDPSTGRKSPGRTKFEAISLERGVTHDKEFENWANKVWNFGAGLGAEVSLKDF
                     RKDIIIEMYNETGQLVIAYKVFRCWVSEFQAQPDLDANANAIAIQSIKLENEGWVRDV
                     EVAEPAEPSFNAAG"
BASE COUNT          642 a          878 c          896 g          624 t
ORIGIN      
        1 gagaaatcta ttttggctct ctcaccttcg ctcaggatga cggcatcgcc cgtcaccttt
       61 gcgccgtagc gcctttgcgg gagataatcc gatctttttt ttgcgccctt tgcgtttttt
      121 gcggccattc ctctcttcgg ttgcccatcg ccgccagact tccgtcaatc ttcactgcgg
      181 ataaaatgcc gcaccggcgc gtcattctgg ccgcaccggg caagcttcat gtttaattga
      241 agattcctct tgtcggcggc gcggcgcggt gcgtctcggt tgccgcactc aataaccgtg
      301 agcaaaaata agcccatgga aagagcgact tggcaggtcg atccgtttgg tgtcgatctt
      361 gcgaagcgct ggtttggaca tgaaagaggg ttgaggctgt gcaaagcgac gcatcaagcg
      421 atgactcggc attgctgatc cgcgacattc tcattcacgt gattaagcat ccagaggcga
      481 aagacacggc ggagggcatc cataagttct ggctgtcggc gcaaaccgcg caccaaagcc
      541 gcgataaagt tcgcgaagct ttgaagtatt tgtccgagca aaaacgctgg ctgacgcaga
      601 aaaacgccgg cgcggcggtg acgctttacg gtctcgataa agatcgtgtc gatgaaatta
      661 aagagtttct ccgtgctcga taaaattcac cgcgaacgat cgaaggaggt ttcatggcag
      721 tagcagcaac ttacccggga gtttacatcg aagaaattcc cagcggcgtg cgcacgatca
      781 ccggtgtggc gacatcgatt gcagctttcg tcgggtgggc ggccaaagga cccaccgacc
      841 gggcggagtt gctcttgagc tggtcggact acgaccgaaa gttcggcggt ttggatcgcc
      901 gcagtctttt gggctatgcc gtgtcgcaat ttttcgccaa tggcgggcag cgcgcctata
      961 tcgttcggct ggcgatgact ggctcggcga cggcggcgga caacgccgtc gccgccaacg
     1021 aaactctaga cggcaagctc aagattatcg ctaacaatcc cggcaagtgg ggcaatgatt
     1081 acgcggcgat cgttcgcgcg cgtccagtgc ccgacagcga tcgctttcaa ttgcgcatcg
     1141 ccaagctgca agccgacggc accgggctga ccgtcgaggc ctacgacaac ttgtcgatgg
     1201 cggccaccga tccccgcttc gtggtcaacg ttttgaagga cgaatcggtg ttggtgcacg
     1261 gcgaaatcgt cggcggcgcg accactccgc cggctgatac gacgattcca acctccggcg
     1321 tcatccccgc cgccgccaaa ctaaaaagtg gccaggacgg caaggtcgtg cctcccaccg
     1381 atcccgacat cgagcttgcc gcccaaccgg caagcggtgt cggcggcgtg tttcacctcg
     1441 atcgcatcga tctgtttaat cttctctgcg tccccggcga gaccaagccg gcggaagtgc
     1501 aaaaactgga aaagttctgc cgcgaccggc gggccttttt gatcgccgac agtgtcgcca
     1561 ccgctaccgt aacgagcctg caaaacggcc ccgatgccaa tatcaccggc gacaatgcca
     1621 tcaatgcggc tttttacttt ccctgggtat tggcgccgga tccgttgcag caaaaccgcc
     1681 tggccgagtt tccgccttgc ggctttgccg ccggactgta cgcgcgcacg gacagcaacc
     1741 gcggcgtctg gaaggcgccg gccggcaccg aggcgagctt ggtcggcgtc agcggggtca
     1801 agatcgttct caccgacggt gaaaacggcg tgctcaaccc caaaggcgtc aactgtctaa
     1861 ggtcgctgcc ggtctacggc accgtgctgt ggggcgcgcg cacgctgcgc ggcaatgacg
     1921 aagtcggctc cgaatggaag tatgtgccgg tgcggcgcac cgcgctgttt atcgaagagt
     1981 cgttgtttcg cgccctcaaa tgggtcgtct tcgagcccaa cgacgaaccg ttgtgggcgc
     2041 aaattcgctt gaatgtcggc gccttcatgc acgacctgtt tcgccagggg gcgtttcagg
     2101 gcagatcgcc gcgggacgcc tacttcgtca aatgcgacag tgaaaccacg acgcaaaacg
     2161 acatcaaccg cggcgtggtg aatattttgg tcggctttgc gccgctcaaa cccgcggagt
     2221 ttgtcatcgt gcagattcag cagatggccg gccagatcca ggtttagtta aaaggagatt
     2281 cccatggctc agttcagcgt caacaccagt cgtttcgatc cctataaaaa ctttaaattc
     2341 cgcgtcaagt gggatggcaa atatgtcgcc ggcgtgagca aggtcggcgc gctcaagcgc
     2401 agcaccgaag tggtcgagca ccgcgagggc ggcgatccca gcaccggccg taaatcgccg
     2461 ggccgcacca agtttgaagc gattagcctg gagcgcggcg tgacccacga caaggaattc
     2521 gagaactggg ccaacaaagt ttggaatttc ggcgccggcc tgggcgccga ggtgtcgctc
     2581 aaagattttc gcaaggacat catcatcgag atgtacaacg agaccggcca attggtcatc
     2641 gcctacaaag tgtttcgctg ctgggtgtcc gagtttcagg cgcagccgga tctcgatgcc
     2701 aacgccaacg ccatcgccat ccagtcgatc aagttggaga acgaaggttg ggtgcgcgac
     2761 gtcgaggtcg ccgaaccggc tgagccgagc ttcaacgccg ccgggtagag cccatgctac
     2821 tggagagtct cacgctgttg gtagtttatc gggggagtaa tgcaccacga aggatataac
     2881 gcggcacagc cgcaacctta actcggaata tctcccgcaa aggcgctaag ctcgcaaagg
     2941 tcggaaaata agatggtgaa gaccgtttgt aagagtccta tttttttcct ttcagaactt
     3001 ggcgtgcttt gcgccttggc gagagtcgat cccctcttcg
//
LOCUS       DATIRS010000461         3207 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1313185, whole genome shotgun sequence.
ACCESSION   DATIRS010000461 DATIRS010000000
VERSION     DATIRS010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3207
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1313185"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..800
                     /locus_tag="VLM90_05815"
     CDS             <1..800
                     /locus_tag="VLM90_05815"
                     /inference="COORDINATES: protein motif:HMM:NF013593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cell division protein FtsH"
                     /protein_id="HSQ12510.1"
                     /translation="QIPPCLSIACPALLAARQDKQSIDMAEFDEAIERVVAGLQKKSH
                     VINPKEKKIVAYHESGHALIAELAPGADPVSKISIIPRGIAALGYTTQLPTEDRYLMT
                     RSELVARIDVLLGGRVAEEIVFGDVSTGAQNDLQRATEIARTMITQFGMSEKIGLASL
                     EGPRHATFLMVPTQSPREYSEETARQIDEEVKQILSEAHGRARNILAAHRTALDELAG
                     LLLEKEVVDRPALQAILKVRSIDSLKEKRRAADLSESESHQSNAERE"
     gene            867..1211
                     /locus_tag="VLM90_05820"
     CDS             867..1211
                     /locus_tag="VLM90_05820"
                     /inference="COORDINATES: protein motif:HMM:NF024845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-TFIIB domain-containing protein"
                     /protein_id="HSQ12511.1"
                     /translation="MKNETKRPEEKFDEHANEDGYFAAKERELIEDMRLEFHKVRAAR
                     RDAALATCPKCSGRFQKYSLLGCVVERCENCEGIWLNKGELDGILRQQARGPLAIFLD
                     RCFARTETDNKN"
     gene            1351..3063
                     /locus_tag="VLM90_05825"
     CDS             1351..3063
                     /locus_tag="VLM90_05825"
                     /inference="COORDINATES: protein motif:HMM:NF014877.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12512.1"
                     /translation="MAETEIALAQLLNYAPVPLAFGTSGLRGLVRDITDLEAYINVKG
                     ALRYLLGTGDIRANSRVVIAGDLRPSTERIMRACVQAIFDSGCPVEIAGKIPTPALVF
                     HAISQQSAGIMVTGSHIPFDRNGVKINKSVGEVMKSDEAGIIGEVERVRAEEYRRSAT
                     VSPFDACGMLKRAPELPPIDGAAEQSYVRRYMDCFRRGGLAGLRVLVYQHSAVGRDLL
                     PRILREMGAEVVTAGRSETFIPIDTENITDEQLERLEEFARSAENGGRPIAAIVSTDG
                     DSDRPLVTAVLPANEVVLGASRVRVLPGDLLGVVVGEYLCADAAAVPISANDAVERRL
                     KERKIILEKTKIGSPYVVAALDDLRAAGKQQRIVGWEANGGFLTGSDIELNDGVLAAL
                     PTRDALLPILANLFAAAQQGLSLAALWDRLPARFGRAGLLDDFPVAASQAILGQLFPA
                     GAAIEVEFVGAGGVVDCSRADGSRVGLAPSAGKNWQHCLATLSRFFTPASGFDDIARI
                     NVLDGVRIYFRNGDIAHIRPSGNAPQLRIYAVSDTQARADQIVDYAVREPDGILRQLE
                     RAFT"
BASE COUNT          671 a          914 c          984 g          638 t
ORIGIN      
        1 gtcaaattcc gccatgtcta tcgattgctt gtcctgcgtt gctggcggcg cggcaggaca
       61 agcaatcgat agacatggcg gaatttgacg aggcgatcga acgggtggtc gcgggattgc
      121 aaaaaaagag ccatgtcatc aatccgaaag aaaagaaaat cgtcgcctat cacgaatccg
      181 gtcacgctct catcgcggag ctcgcgcccg gtgccgaccc cgtttccaag atctcgatta
      241 ttccacgggg catcgctgcc ttgggttaca cgacccaact gccgaccgaa gatcgttatc
      301 tcatgacccg ttccgagtta gtcgcgcgca tcgacgtcct tttgggcggc agagtagcgg
      361 aggagatcgt tttcggcgac gtatcgaccg gggcgcaaaa cgatctgcag cgcgccaccg
      421 agatcgccag aactatgatt acccaattcg gcatgagtga aaaaatcggt ctcgcatctc
      481 tcgaaggacc gcgccatgcg acattcctga tggtgcccac ccagagtccc agagagtaca
      541 gcgaggaaac cgcccggcag atcgatgaag aggttaaaca aatattgtca gaagcgcatg
      601 gcagggcgcg caatattcta gccgcgcatc gcacggcgct tgatgaattg gccgggctgt
      661 tgctggaaaa ggaagttgtc gatcggccag cgctgcaagc gatcctaaaa gtacggagca
      721 tcgacagcct caaagaaaaa agacgcgccg cggacctctc cgaaagcgaa agccatcaga
      781 gcaacgccga acgggaatag ccagcggttg ggaaatgttc ggggccgttg catcgtgccg
      841 attcgatctg cccccgagag ccaattatga agaacgaaac caaacgcccc gaagaaaagt
      901 tcgacgagca cgccaacgaa gatggttatt ttgccgcaaa agaacgtgaa ctgatcgagg
      961 acatgcggct cgagtttcac aaagtccgag cggcgcggcg tgatgcggcg ctggcgacct
     1021 gtcccaagtg ttcgggaaga ttccagaagt actcgctcct tggatgcgtc gtcgagcgct
     1081 gtgaaaactg cgagggcatt tggctcaata agggcgagct cgacggcatc ttgcggcagc
     1141 aggcgcgcgg tccgctggcg attttcctcg accgttgttt cgccaggact gaaacagaca
     1201 ataagaacta gcgatacccg cgtcatctcg aacctgatgg taaggtagga acggccccct
     1261 gtgtctagcc tctgggactg tcgcccacag gagagcgcgg cgacgtcgca atcactggct
     1321 cgaactctta tagtgcatta caatttaccg atggccgaaa cagaaatcgc tctcgcgcag
     1381 ttgctcaatt acgcgccggt ccccttggcg tttggcacca gcggcttgcg cggcttggtc
     1441 agagacatca ctgacctcga agcttacatc aacgtcaaag gcgcgctgcg ttacttgtta
     1501 ggcactggtg atattcgcgc caatagccgc gtggtcatcg ccggcgatct gcggccaagc
     1561 accgagcgga ttatgcgcgc ctgtgtccaa gcgattttcg actcgggatg cccggtggaa
     1621 atcgccggca agattcccac gccggctttg gtcttccacg cgatctcgca gcaaagcgcc
     1681 ggcataatgg tgaccggcag ccacattccc ttcgaccgta acggcgtcaa gatcaataaa
     1741 agcgtcggcg aggtgatgaa gtccgacgag gccggcatca tcggcgaagt cgagcgggtc
     1801 cgggctgaag aataccgcag gagcgcgacc gtctcgccgt tcgatgcttg cggcatgctc
     1861 aagcgcgcgc cggaattacc gccgatcgat ggcgctgccg aacagtcgta tgtgcgccgc
     1921 tacatggatt gctttaggcg cggcggtctg gcggggttgc gggtgctcgt ctatcagcat
     1981 tccgccgtgg ggcgcgacct cttgccgcgg attctgcgcg agatgggcgc cgaagtggta
     2041 acggctggac gcagcgagac gttcattccc atcgacactg agaatattac cgacgaacag
     2101 ttggagcgct tagaagagtt tgcccgttcc gccgaaaacg gcggccggcc gattgcagcc
     2161 atcgtttcca ccgatggcga ctccgatcgg ccgttggtga ccgccgtgct gccggccaat
     2221 gaagttgttc tcggtgccag ccgcgtgcgc gtcctgcccg gcgatctgct cggagtggtg
     2281 gttggcgaat acctgtgcgc cgatgccgcg gcggtgccga ttagcgctaa cgatgcggtc
     2341 gaacgccgtc tgaaggaacg caaaatcata ctggagaaga ccaagatcgg ttctccgtac
     2401 gtcgtcgccg cgctcgacga cttgcgcgcc gctggcaagc aacaacgcat tgtcggctgg
     2461 gaagccaacg gcggattttt gaccggcagc gatatcgagt taaatgacgg cgtattggcg
     2521 gcgctgccga cgcgtgacgc gctgctgccg attctggcta atctgttcgc cgcggcgcag
     2581 cagggtttga gtttggcggc gctgtgggac cgcttgccgg cgcgttttgg ccgggccggt
     2641 ttgctcgacg atttcccggt ggcggcgagc caggcgattc ttggtcaatt gtttccagcc
     2701 ggcgctgcca tcgaagttga gttcgttggc gccggcggtg ttgtcgattg cagtcgcgcc
     2761 gatgggagtc gggtggggtt ggctccatcg gccggcaaga actggcagca ctgtctggct
     2821 acattgagcc gtttcttcac gccagcctcg ggtttcgacg acatcgccag aattaacgtc
     2881 cttgacggcg tgcgcatcta tttccgcaac ggcgatatcg cccatatccg gccgtcgggc
     2941 aacgcgccgc agctgcgtat ttacgccgtc agcgacacgc aagcgcgcgc cgatcagatt
     3001 gtcgactatg ccgttcgcga acccgacggt attttgcgcc agctggaacg cgctttcaca
     3061 taagttacgg ttgcgacagc tgcattcgtt aagaaaacga gcgagccgcg agtttttcac
     3121 cgggagaata acctcttggc gcgtcgggct cgagggccag ccgcaaggct tcgtccgcgg
     3181 tttttaaaaa ctcaaagtgg ataccct
//
LOCUS       DATIRS010000462         8118 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_132959, whole genome shotgun sequence.
ACCESSION   DATIRS010000462 DATIRS010000000
VERSION     DATIRS010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 8118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8118
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132959"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..468)
                     /locus_tag="VLM90_05830"
     CDS             complement(<1..468)
                     /locus_tag="VLM90_05830"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12513.1"
                     /translation="MSKRQTRIVFLDAATYGDMPLAGFTETWDCTVHQVTNAAQTGAR
                     LAGHAIAVTNKVAFDTAILNCAEAAELKLIAVAATGTDIIDKEAAAKRGVKVCNVPGY
                     ASQSVAQFTMALILELANRASSYAAAVKAGEWHKSPVFTLLTFPKMELAGKKLG"
     gene            complement(465..1301)
                     /gene="mazG"
                     /locus_tag="VLM90_05835"
     CDS             complement(465..1301)
                     /gene="mazG"
                     /locus_tag="VLM90_05835"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF007113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HSQ12514.1"
                     /translation="MSDRETEEKFTELLNVMAQLRSDAGCPWDRSQTHLSLKPCLLEE
                     TYELLDALDDGDAKKVTEELGDVLLQVIFHAQIAKEENRFTIEDVIALLTDKLVRRHP
                     YVFAGEPLPEDPAAALKQRAQLKAQENQNDKNPGASNSALGNVPKAMPALARAQAISR
                     RAAGLGFEWPNIEQVWAKVDEEMRELKAAVASGDKTHTGEELGDLLFTMVNLARFLDV
                     ESEEVLAQTIDRFTRRFHHIEAELRQANKDFAQSSLEEMDHYWDEAKKLEGQGKLGKL
                     AK"
     gene            1419..2267
                     /locus_tag="VLM90_05840"
     CDS             1419..2267
                     /locus_tag="VLM90_05840"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSQ12515.1"
                     /translation="MPVANVDGVATYYETHGSGTPILMCAPGGFDATIEKWRVASAWT
                     GIDAIQALAAAHTVILYDRRECGQSGGRVERLSWASYTSHGKALLEHLKIDAAWILGG
                     CMGCSVAIAFGVHYPQATRGLLLHWPVGGYRWKVNSQARFLRHYQFAKQHGLKGVVER
                     ARGGKSFWMDPEAGPWAGMIAGDAGFADRLLAQDLERYLGLIITSGRALFDRDTATGA
                     EPEEVMGIKAPSLIIPGDDQSHSTSGAHYLRELLPNADFWNVMPPGQTTQTVVDRILA
                     FCRKHD"
     gene            2365..3084
                     /locus_tag="VLM90_05845"
     CDS             2365..3084
                     /locus_tag="VLM90_05845"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HSQ12516.1"
                     /translation="MDVSNSTVQLNTSDGKMDAYVAQPKDGGSYPGVVVIQEAFGVND
                     HMKKVTERIAAEGYVAICPDIFHRESERVIPFSDMAKAIATLQRVQDPKAMEDVGAAI
                     AHLKSQGNVKAGSIGVVGFCMGGRLTYLAAAHHANDVKCAVPYYGGGITMGNPSPLSR
                     TGEIKCPMYLFFGAKDQLIPMDQVGQINTELTTKQVPFQMKIYPDAGHGFFCDERGSY
                     HEKSATDAWEKTKSFFAQHLK"
     gene            3183..4067
                     /locus_tag="VLM90_05850"
     CDS             3183..4067
                     /locus_tag="VLM90_05850"
                     /inference="COORDINATES: protein motif:HMM:NF012993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase"
                     /protein_id="HSQ12517.1"
                     /translation="MATKKNSRQVRVALVQMSCAKEPAANLAKAMQRVEAAAEKGAQI
                     VCLQELFRSRYFCQSEDHGNFKLAETIPGPSTEALGEVARRKEVVIVASLFERRTAGI
                     YHNTAVVIDADGSLAGKYRKMHIPDDPLYYEKFYFTPGDLGFPSFQTRYAKIAVLVCW
                     DQWFPEGARAAALAGAQILFYPTAIGWIPQEPRVAAQNQRNAWELIQRSHAIANGVFV
                     ASTNRVGSEGKIRFWGNSFVAGPLGELVAHAGDTREEILIAKCDLAKIEETRQAWPFL
                     RDRRIDAYGALLTRSLDQ"
     gene            4143..5156
                     /locus_tag="VLM90_05855"
     CDS             4143..5156
                     /locus_tag="VLM90_05855"
                     /inference="COORDINATES: protein motif:HMM:NF016274.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HSQ12518.1"
                     /translation="MPAEWAPHRATWLSWPHNLETWPTYLEKVREVWLRMVAALSPHE
                     QVLLLVNDATVKKEVTARLTGAKAAMANVTLLEIPTVDVWMRDYGPTFVTRNSAVQPL
                     SLNDWIFNGWGGKYPSYDEDERVAQAIAQLLQVPVFEHKLVLEGGSIEVNGAGTCLTT
                     EQCLLNPNRNPELSRTQIEAFLKASLGVRHVLWLGDGIVGDDTDGHIDDIARFVDPTT
                     VACIIETNPQDDNYRCLQENRERLQSARDQDGKKLEIISLPCPAPLFCDGARLPASYA
                     NFYIANEIVLVPVFDDANDKLALGILQECFPKRKIIALRGNEVVAGLGAIHCVTQQEP
                     SVR"
     gene            5228..5440
                     /locus_tag="VLM90_05860"
     CDS             5228..5440
                     /locus_tag="VLM90_05860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12519.1"
                     /translation="MGQIIQIQELHQARRRKSEKVSMHQCLELLEWNLKKSVDDYFAA
                     PREERSMRATQIRKLSEILEYALRLL"
     gene            5458..6585
                     /locus_tag="VLM90_05865"
     CDS             5458..6585
                     /locus_tag="VLM90_05865"
                     /inference="COORDINATES: protein motif:HMM:NF014680.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HSQ12520.1"
                     /translation="MDFVHLIVPLVIFVAGSIVLGWFFLSRLRTLLQGKSEDQSLLLM
                     QQQIDQLRSQLSSTLDNNSRSLQQQLGQMIAQVNERLKENAQVLNDTQQSLGERLDNA
                     ARVVGGVQKSLGGLEEANRRIYEVGKDISSLQEILRAPKLRGGLGEFFLEDLLGQILP
                     PQHFSIQHGFRSGEKVDAVIKLGASLVPVDAKFPLENFRRLLEATSDDERGRVKRQFA
                     ADVRKHIDAIAAKYILPDEGTYDFALMYIPAENVYYETVIKDEAADERNLCQYAMSKR
                     VIPVSPNSFYAYLQAIVLGLKGMRIDDRTKEIIQYLGRLQGDFAKFRDDFAVLGKHIN
                     HAQSSYQSADKRLEQFGQKFLAAESAQSELSETGTTGAKTD"
     gene            6595..8037
                     /locus_tag="VLM90_05870"
     CDS             6595..8037
                     /locus_tag="VLM90_05870"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSQ12521.1"
                     /translation="MHLSLFSRLTIGYLAIFAIVAAASTYAIVELTDFGNQAESILRI
                     DNRVLDHEKFLTDLLLAQSRAEQKYVISRDEAWYLQFVRLKNDFEARAEGAAAVADVL
                     AKPILLRVRNDYRRYVDLVEREARLVRTRKEYRHAQFKQDKDNLVDAMLDELERLRAN
                     QQLATYAKVKDLAASAAQAREAALSITAGCLLVIVLMSLLITKSITRPLAALKAKTQE
                     IARGNFDNPVQVKSPQEIGELAVALNSMSQRLKELDFMKADFFASMSHELRTPLTSIK
                     EGTGLLLDGVGGAITEKQQKLLGIITEESNRLISLVNTFLDLGKMEAGMMRYEFEMSP
                     IEPLIKRAVAEITPLVEAKQIRFESALDGPTPALRLDPERMLQVLRNLMGNAVKFTPK
                     GGQVSIAVKRRDGILEVSVKDSGPGIPSESLESIFEKFSQGSHAGAIHRQGTGLGLAI
                     AKNIISSHGGNIWAESQLGYGSKFVFVLPC"
BASE COUNT         1677 a         2220 c         2428 g         1793 t
ORIGIN      
        1 gccgagtttc ttgcccgcaa gttccatctt tggaaaagtc aggagcgtga agaccggact
       61 cttgtgccat tcgccggctt tgacggcggc ggcgtagctg ctggcgcgat tggccagttc
      121 caagatcaac gccatggtga attgggccac cgattgactg gcgtagcctg gcacgttgca
      181 gactttgacc ccgcgcttgg ccgcggcttc tttgtcgatg atgtcggtgc cggtggcggc
      241 gacggcgatg agtttaagct cagccgcttc ggcgcaattc agaatcgctg tgtcgaaggc
      301 gactttattg gtgaccgcga tggcgtggcc ggcgagtcgg gcgccggttt gcgccgcgtt
      361 cgtgacttga tggaccgtac agtcccacgt ttcggtgaat cccgctagcg gcatgtcgcc
      421 ataggtggcg gcgtcgagaa agacgattcg agtttgccgc ttgctcattt cgccaacttc
      481 cctaatttcc cttgaccttc gagtttcttt gcttcgtccc agtagtggtc catctcttcg
      541 agagacgatt gggcaaaatc tttattcgcc tggcgcagct cggcttcgat gtgatgaaag
      601 cggcgggtaa agcggtcgat ggtctgtgcc aggacttctt cggattcgac atcgagaaaa
      661 cgcgcgagat tgaccatggt gaaaagcaag tcgccaagct cctcgccggt gtgggtcttg
      721 tcgccggaag ccacggctgc tttgagttcg cgcatctctt cgtcgacctt ggcccagact
      781 tgttcgatat tcggccattc gaagcctagg ccggcggcgc gccgcgagat cgcttgcgcc
      841 cgcgccagcg ccggcatcgc ttttgggaca ttgccgagag cggaattgct tgcaccgggg
      901 tttttatcat tctgattttc ttgggctttg agctgggcac gctgtttgag cgcggccgcg
      961 ggatcttccg gcagcggttc gccggcgaaa acatagggat ggcggcgcac cagtttatcg
     1021 gtgagcagcg cgatgacatc ttcgatggtg aagcggtttt cctccttggc gatctgggcg
     1081 tgaaagatga cttgcagaag cacatcgccg agctcctctg tgactttttt cgcgtcgccg
     1141 tcatcgaggg catcgagcaa ttcataggtc tcttcgagca ggcagggctt gagcgagagg
     1201 tgggtctgcg acctgtccca tggacaaccg gcgtcgctgc gcagttgcgc catgacgttt
     1261 agcagttcgg tgaatttttc ttcggtctcg cgatcgctca cagatttggc ctccacgccg
     1321 cttgacgttg tcaactttcc ttccgggccg gcagcgtgct aaatcttact ggtcgttatt
     1381 cttgaagtcc agcaagtcta gtcaaaggag agccgcttat gccagtagcg aacgtcgatg
     1441 gggtcgcgac ctactacgaa actcatggtt cgggcacgcc gatcttgatg tgcgcgccgg
     1501 gcggcttcga cgcgactatt gaaaaatggc gggtggccag cgcatggacc ggcattgacg
     1561 cgatccaagc gttggcggcg gcacataccg tgattctcta tgatcggcgc gagtgcggcc
     1621 agtcgggcgg gcgggtcgaa cggttgagct gggctagtta taccagtcat ggcaaagcgc
     1681 tgctcgagca tttgaagatc gatgcggcgt ggatcttggg tggctgcatg ggctgctcgg
     1741 tggcgattgc gtttggcgtt cattatcccc aagcgacccg cggtttgctg ctgcattggc
     1801 cggtgggcgg ttatcgttgg aaggtcaata gtcaagctcg cttcctgcgc cactaccagt
     1861 tcgctaaaca gcatggcctc aaaggcgtgg tcgagcgcgc ccgcggcggc aagagttttt
     1921 ggatggaccc ggaggctgga ccttgggccg gtatgatcgc cggcgatgcc ggcttcgcgg
     1981 accgcctttt agcgcaagat ttagagcgtt acctggggtt gattatcacc agcggccgcg
     2041 ccctgtttga ccgcgacacc gcaaccggcg cagagccgga ggaggtgatg gggatcaaag
     2101 cgccgtcgct aattatcccc ggcgacgatc agtcccactc gacctccggc gcgcattacc
     2161 tgcgtgaact tttgccgaat gccgatttct ggaatgtcat gccgccgggg cagacgacgc
     2221 agaccgtggt cgatcggatt ctcgcattct gccgcaagca tgattaattt cgtgaagtcg
     2281 gtgcgctgaa gtgtggaccg ctgggttgaa atttgataga caaaatccac ttcgaattgt
     2341 cattgaccaa tcaaggaggt agcgatggac gtttccaatt ctacggtgca actcaacaca
     2401 tccgacggca agatggatgc ctatgtggcc cagcctaagg atggcggcag ctatcccggc
     2461 gtggtggtta ttcaagaggc tttcggcgtc aacgatcaca tgaagaaagt cacggagcgg
     2521 atcgcggcgg aaggctacgt ggcgatctgt ccggatattt ttcatcgcga gagcgagcgg
     2581 gtgattccat tctccgatat ggccaaggcg atcgcgactt tgcagcgggt gcaagacccc
     2641 aaggcgatgg aagatgtcgg cgcggcgatc gctcatttga aatcccaagg taacgtcaaa
     2701 gccggctcca tcggcgtcgt cggcttctgc atgggcggcc ggctaaccta tttggccgcg
     2761 gcgcatcacg ccaacgacgt gaagtgcgcg gtgccctatt acggcggcgg cattacgatg
     2821 ggcaacccga gcccgctgtc gcgcaccggc gagatcaaat gtcccatgta cctgttcttt
     2881 ggcgccaagg atcaactgat cccgatggac caagtcggac aaatcaacac tgaattgacc
     2941 accaagcagg tgccgttcca gatgaagatc tatcccgatg cgggccatgg ctttttctgc
     3001 gacgaacgtg gcagctatca tgaaaagtcg gccaccgacg cgtgggagaa gaccaagtcc
     3061 ttcttcgcgc agcatctcaa ataaatccgc ctgtcgatac cttcaaaggg agcggagaag
     3121 tgcaaagctt ttcctctccc ttttttgttt cttcgagtta tttcagctag attagccgca
     3181 tcatggcaac aaagaaaaat tcgcgccagg ttagagtcgc tctcgtacag atgagttgcg
     3241 ccaaggaacc cgccgccaat ctcgccaagg ctatgcaacg cgtcgaagcg gcggctgaga
     3301 aaggcgcgca gatcgtctgc ctgcaagagc tttttcgctc gcgctacttt tgccaaagcg
     3361 aggatcatgg caatttcaag ctcgccgaaa ccattcccgg gccgagcacc gaagcgttgg
     3421 gcgaggttgc ccggagaaaa gaagtagtca tcgtcgcctc gctgttcgag cggcgcacag
     3481 ctgggatcta ccataatacc gcggtggtca tcgatgccga tggctcgctc gctggcaagt
     3541 accgcaagat gcatatcccc gacgatccgc tctactacga aaagttctat tttacccccg
     3601 gcgatttggg ctttcccagt tttcaaacgc gttacgccaa gatcgcggtg ctggtctgct
     3661 gggatcagtg gtttcccgaa ggggcgaggg cggccgccct ggccggcgcg cagattcttt
     3721 tttatccgac ggcgattggt tggattcctc aagagccgcg tgtcgcggcg cagaatcaac
     3781 gcaatgcctg ggaactgata cagcgctccc acgcgatcgc caacggcgtg tttgtcgcct
     3841 cgaccaaccg tgtcggcagc gaaggcaaaa tccggttctg gggcaactcc tttgtcgctg
     3901 ggcccttggg tgagctggtt gcccatgctg gcgacacgcg cgaagaaatt ctgatcgcta
     3961 aatgcgatct cgctaagatc gaagagacgc gccaagcctg gccgtttctg cgcgaccggc
     4021 gcatcgacgc atacggtgcc ctgctgacgc gatccctcga tcaataattt ttccggtttg
     4081 aaacaaaatc gatggcaaat tcatttccaa gttcatccac gccatctgaa ctggggtact
     4141 cgatgccggc tgagtgggcg ccgcatcgcg ccacttggct atcctggccg cataatctag
     4201 aaacttggcc gacctacctg gaaaaagtcc gggaggtttg gctgcggatg gtcgcggcgc
     4261 tgtcacccca tgagcaggtg cttctgctgg tcaatgatgc caccgtgaaa aaggaagtga
     4321 cggcgcgact caccggcgcg aaagcggcga tggccaatgt gacgctgctg gagatcccga
     4381 cggtcgatgt ctggatgcgc gattacggac cgacgttcgt tacccggaat tcagcggtgc
     4441 agccgttgtc gctcaacgat tggatcttca atggctgggg cggcaagtac ccgtcttatg
     4501 atgaggacga gcgggtcgcg caggcgatcg cacagctttt gcaagtgccg gtgttcgagc
     4561 acaagctggt cctcgaaggc gggtccatcg aggtaaacgg cgcgggcacc tgtctcacca
     4621 ccgagcagtg tttgctcaat ccgaatcgca acccggagtt aagccgcacc cagatcgaag
     4681 cgtttctcaa agcctcgctt ggagtgcgcc atgtcctatg gctcggcgac ggcatcgtcg
     4741 gcgacgatac cgacggccat atcgacgaca ttgcgcgctt tgtcgatcct accaccgtag
     4801 cgtgtatcat cgagaccaat ccgcaagacg ataattaccg ctgcttgcaa gaaaaccgtg
     4861 agcgcttgca gagcgcgcgc gaccaggacg gtaagaaatt agaaattatc tccttgccgt
     4921 gtccggcgcc gctcttctgc gacggcgcgc gcctgccggc gagctacgcc aatttttaca
     4981 tcgccaatga aatcgtgctc gtgccggtgt tcgacgatgc caacgacaaa ctagccttgg
     5041 gaatattgca ggagtgtttt cccaagcgca aaataatcgc tctgcgcggc aatgaagtgg
     5101 tggccggctt gggcgcgatc cactgcgtca cccagcagga gccgtcggtg cgctgactgc
     5161 tggaccgctg cgttttcttt tccaaggcct tgactatttt tcgcgctacc ctatcctggc
     5221 cgctgttatg ggtcagatca ttcaaatcca ggagctgcac caagcgcgcc ggcgcaagtc
     5281 ggaaaaagtc agcatgcatc aatgcctcga gcttttggaa tggaatttga aaaagagcgt
     5341 cgatgactat ttcgccgcgc cacgagaaga gcgttccatg cgcgcaaccc aaatccgcaa
     5401 gctcagcgaa atcctcgaat acgcgttgag actgctttag ccccgccacg gttagtcgtg
     5461 gattttgtcc atctcatagt tccgctggtt atcttcgttg ccgggtcgat agtgcttggc
     5521 tggttttttc tcagccgttt gcgcacgctc ctacagggta agtcggaaga tcagtcgttg
     5581 ctgctaatgc agcagcagat cgatcaactg cgctcgcagt tgagttcgac tctcgataac
     5641 aattctcggt cattgcaaca gcagttgggc caaatgatcg ctcaggtcaa cgagcgcctg
     5701 aaggaaaacg ctcaggtgct caacgacact cagcagagtc tgggcgagcg gctcgataac
     5761 gcggcgcggg tggttggcgg cgtgcagaaa agcctcggcg gtctcgaaga ggccaatcgg
     5821 cgcatttatg aagtcggcaa ggatatctcg tcgttgcagg agatcctgcg ggcgcccaag
     5881 ctgcgcggcg gtctcggcga atttttcctc gaggacttgc tcgggcagat tctgccgccg
     5941 caacatttct cgatccagca tggctttcgc agcggtgaga aagtcgacgc ggtgatcaag
     6001 ctgggcgcct ccctggtgcc ggtggacgcg aagtttccct tggaaaattt cagacgcttg
     6061 ctggaggcga cgagcgacga tgagcgtggc cgggtcaaaa gacagttcgc ggccgatgtg
     6121 cgcaagcata ttgacgccat cgcggccaag tatattcttc ccgatgaggg gacctacgat
     6181 tttgcgctga tgtatattcc ggcggaaaat gtttactatg aaacggtcat caaagatgaa
     6241 gccgccgacg agcgcaatct gtgccagtat gccatgagta aaagggtgat tccggtatcg
     6301 cccaacagtt tttacgccta tttgcaggct atcgtcttgg gtctcaaagg catgcgcatc
     6361 gacgaccgca ccaaagaaat tattcagtac ttgggccggc tgcagggaga cttcgccaag
     6421 tttcgcgacg atttcgccgt cctcggcaaa cacatcaatc atgcccagtc gagttatcag
     6481 agcgccgaca agcggctcga acagttcggc cagaaatttt tggccgcgga gtcggcgcag
     6541 agcgagctgt cggaaaccgg caccaccggc gctaagaccg actagcgaac cgccatgcat
     6601 ttgagtttgt tttcccgtct aacgatcggc tatctggcga tctttgcgat cgtcgcggcg
     6661 gcgagcacct acgcgatcgt cgagctgact gacttcggca accaggccga gtcgatcctg
     6721 cgcatcgata atcgcgtgct cgaccatgaa aagtttctca ccgatctgtt gctggcgcag
     6781 agccgggcgg agcagaagta tgtcattagc cgcgacgagg cctggtatct gcaattcgtc
     6841 cgtttgaaga acgatttcga agcccgtgcc gagggcgcgg cggcggtggc ggacgttttg
     6901 gccaaaccga tcttgttacg ggtacgaaat gactatcggc gttacgtgga tttagtcgaa
     6961 cgcgaggcgc gcctggtgcg tacccgaaaa gaatatcggc atgcgcagtt caagcaggac
     7021 aaagacaatc tggtcgacgc catgttggac gagctggagc gcttgcgcgc caatcaacaa
     7081 cttgcgacct atgctaaggt caaagacttg gccgcgtcgg cggcgcaagc gcgggaggct
     7141 gcgttgtcga tcaccgcggg ttgtctgttg gtgattgtcc tgatgtcact gttgatcacc
     7201 aagagcatta cccggcccct cgctgcgctc aaagcgaaaa ctcaggaaat tgcccgtggc
     7261 aacttcgata accccgttca ggtcaagtcg cctcaggaga ttggcgaact ggcggtggcg
     7321 ctcaattcga tgagccagcg gctgaaagag ctcgacttta tgaaggcgga ttttttcgca
     7381 tccatgtccc atgagctgcg cacgcctttg acctcgatca aagaaggcac cgggcttttg
     7441 ctcgacggcg tcggcggcgc gatcaccgag aaacagcaaa aactgctcgg catcattact
     7501 gaggaaagca accgcttgat cagcctggtc aatactttcc tcgatctggg aaaaatggaa
     7561 gccggcatga tgcgttacga gttcgagatg agtccgatcg agcctttgat caaacgcgcc
     7621 gtcgcggaaa tcacgccgtt ggtggaagcc aagcaaatcc gtttcgaaag tgcgctggat
     7681 gggccgacac cggcgctgcg gctcgatccc gagcggatgt tacaagtgct gcgcaacctg
     7741 atgggcaatg ccgtcaagtt cacgcccaaa ggcgggcaag tgtcgatcgc ggttaaacgc
     7801 cgcgatggca tcctggaggt ttctgtgaaa gactccggtc cgggtatccc gtcggagagt
     7861 ctcgaatcga tcttcgaaaa attcagccaa ggcagtcacg ccggcgccat tcatcgtcag
     7921 ggcactggac tcggtttggc gatagccaaa aatattattt catcgcatgg tggaaacata
     7981 tgggcggaaa gtcaattggg ctatggcagc aaatttgtat ttgtcttgcc ctgctgataa
     8041 tggtttcggg ctgcggtctg tttcaggaat cgaatcggcg ccgggagttg cgcgaagcgt
     8101 tgatccaagg gcatcagt
//
LOCUS       DATIRS010000463         2167 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_428928, whole genome shotgun sequence.
ACCESSION   DATIRS010000463 DATIRS010000000
VERSION     DATIRS010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2167)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2167)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2167
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_428928"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(222..>2167)
                     /locus_tag="VLM90_05875"
     CDS             complement(222..>2167)
                     /locus_tag="VLM90_05875"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSQ12522.1"
                     /translation="LIEVEYEDLPAVTSIEEALADNAPLVHDASASSGELMGQRYEAP
                     KEFNGTNLCYRFSYANGDVDAGFKKADHIFEDTFTFPRVQHFSMEPHATVADFAGDRL
                     TLWAGTQEPFTLREHLADIFHLPQSKIRVIVPYVGGGYGGKLAVKTEPLAAMLSWKAK
                     RPVRLAHTIEESFRTVTRHPARVRIKTGVSNDGKLLARQCVIHMETGAYADAGPRVTQ
                     KAGYRCFGPYRIPHMKTESYTVYTNTVPAGAYRGFGTLQVTWAYESQMDIIADKLGLD
                     PLEFRIKNLLKKGDLYTPGDTPVDCDLKAGLLQAAEEIGWKQKVTKPNRGRGLAVCMK
                     DGGGTYKVSSAAVKMNADGSVVLLTGTVEVGQGARTALSQVVAEELAIPFDAVTVAQL
                     DTEITPYDVNTNASSSMVVMGLSVQRAAQDLKRQILRHAAKILKVKADQLQLSGGKIV
                     GPKNLTLSFVQLMQKIFLSRSGELVGRGAYQSIKSTKAALGSPTNFWEISWGAAEVEV
                     DRETGEIKLLKYVSLADVGRAIHPVQCEGQDEGGVMNAIGHTLMEEMVYKDGQLLNPN
                     LVDYRVPSFNTLPKDFETILVESHNGPGPFGAKGTGEGGLLPVAAAIGNAVYRAIGLR
                     LYDLPLTPEKVWRGLAARAEMID"
BASE COUNT          426 a          668 c          603 g          470 t
ORIGIN      
        1 cggcgcaggt aacctttttc tcttggctgt tttattgggg actctttgaa aagctattga
       61 acgttccgtt ccccgatgga ctcttgctca gctggtttag aggcgggccg tagggatgga
      121 tcgagatcgg aaatcagatg acggaggtca gaattcccaa ccaattaggc gctgagttct
      181 gccctccgac atccgacctc tgaattcgga tctctgcctc gtcaatcgat catttccgcg
      241 cgcgccgcca aaccgcgcca aaccttctcc ggggtcagcg gcaggtcgta caggcgcagt
      301 ccgatggcac ggtagaccgc gttaccaatc gcagcagcga ccggcaataa tccaccctct
      361 cccgtgccct tggcaccaaa cggtccgggg ccattgtgac tctcgaccag aatggtttcg
      421 aaatccttcg gcaaggtatt gaaactcggc acccggtagt cgaccaagtt ggggtttaac
      481 agctggccgt ctttgtaaac catctcttcc atcaaagtgt ggccgatagc gttcatgacg
      541 ccgccttcgt cctgcccttc gcactgcacc gggtgaatcg cccgaccgac atcggccaag
      601 gatacatact tgagcagttt gatctcgccg gtctcgcggt cgacctcaac ctccgccgcg
      661 ccccagctga tctcccagaa attggtcggc gagccgaggg ccgccttggt actcttgatt
      721 gattggtaag cgccgcggcc gacgagttcg ccggagcgcg acaagaaaat tttctgcatc
      781 agttggacaa acgacaaagt caggtttttc ggcccgacga tcttgccgcc gctcaactgc
      841 aactgatcgg ctttgacttt gagaatcttc gcggcatggc gcaagatctg tcgtttcaaa
      901 tcctgcgccg cgcgctgcac ggacaacccc atcacgacca tcgaactgct ggcgttggta
      961 ttgacatcat agggtgtgat ctcggtatcg agttgcgcca cagtgacggc gtcgaatggg
     1021 atcgccaact cttcagccac cacctggctc aacgccgtcc gcgccccttg cccgacttcc
     1081 accgtgccgg tcagcagcac gacgctgccg tcggcattca tcttcaccgc cgccgacgag
     1141 actttgtagg tgccgccgcc gtctttcatg cacaccgcca ggccgcggcc gcgattgggc
     1201 ttggtgactt tctgtttcca accgatctct tcagcagctt gcaagagccc ggctttgagg
     1261 tcgcaatcca ccggcgtatc cccgggggtg tagagatcgc cctttttcag cagattcttg
     1321 atgcgaaact cgagcggatc gaggcccaat ttatcggcga tgatatccat ctgcgactca
     1381 taggcccagg tcacttgcag cgtgccaaag ccgcggtagg cacccgccgg aacggtattg
     1441 gtgtaaaccg tgtaggactc ggtcttcata tgcggaatcc ggtacggccc gaaacagcga
     1501 taacccgcct tctgcgtcac ccgcgggccg gcatcggcgt aggcgccggt ttccatatgg
     1561 atcacgcatt ggcgcgccag cagtttgccg tcgttactca caccggtctt gatccgaacc
     1621 cgcgccggat ggcgggtgac ggttcggaaa ctttcttcga tggtatgggc cagacgaacc
     1681 ggccgcttcg ccttccacga tagcatcgcc gccagcggct cggtcttgac cgccagtttg
     1741 ccgccgtagc cgccgccgac ataaggcacg atgacgcgaa tcttgctctg cggcagatgg
     1801 aaaatatcgg ccagatgttc gcgcagagtg aacggctcct gagtgccggc ccagagcgta
     1861 aggcggtcgc cggcaaaatc ggccacggtc gcatgcggct ccatggaaaa atgctgcact
     1921 cgaggaaaag taaaggtgtc ttcaaaaata tgatcggcct tcttgaagcc ggcatcgaca
     1981 tcgccgttgg cgtagctaaa tcgataacag aggttggtgc cgttgaactc cttgggcgct
     2041 tcataacgct gccccatgag ctcgccgctg ctggccgaag catcgtgcac caagggcgcg
     2101 ttgtcggcca gggcttcctc gatgctggtc accgccggca aatcttcata ttcgacttcg
     2161 atcagtt
//
LOCUS       DATIRS010000464         1592 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1805415, whole genome shotgun sequence.
ACCESSION   DATIRS010000464 DATIRS010000000
VERSION     DATIRS010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1592)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1592)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1592
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1805415"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..380
                     /locus_tag="VLM90_05880"
     CDS             <1..380
                     /locus_tag="VLM90_05880"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSQ12523.1"
                     /translation="MDAGLVHATISAAVEKIRGGEGPQFVEAQTVRFTGSETNWPTVP
                     RPTDTSLAWDVSSVPEKAREWYRSCDPLLIYIRELVEREQAGRDEIAAIERQVKAEIA
                     AAVEFAVNSPYPKPEEAERDFFA"
     gene            538..1509
                     /locus_tag="VLM90_05885"
     CDS             538..1509
                     /locus_tag="VLM90_05885"
                     /inference="COORDINATES: protein motif:HMM:NF014798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HSQ12524.1"
                     /translation="MRELAYYEAKFEALEEIMAADQRVHLINGTFLSLSPHRHVYQNL
                     KNKYGERMISPPISELGFCGLATGAAMAGLRPIVDLSTGSFIYEAWPQVANEAANAFS
                     MSAGQTRVPVVFHLFHGLRGGGAAQHSGSPQAMLWNVPGLEIAIPSSPRDVKGLLKTA
                     VASDNPTIFVDHTRLLDIRGEIPDNDKPIPFGVADVKRQGSDVTLVATSYTVQVGLQA
                     AAKLAKEGIEVEVVDPRTIVPFDLATILTSIEKTHRVVIADETHQSCGVAAEIAARIA
                     ETGFDKLKTRIRRVSTLDVPVPYSPPLEAHIGPSESRIMEAIRAALA"
BASE COUNT          353 a          455 c          462 g          322 t
ORIGIN      
        1 gcatggatgc cggcctcgtt cacgcgacaa tttctgcagc ggtagaaaaa atccgcggcg
       61 gcgaaggacc gcaatttgtc gaagcgcaaa ccgtgcgctt taccggcagc gaaaccaact
      121 ggcccaccgt gccgcgaccg acggatacct cgctcgcatg ggacgtgagc agcgtgccgg
      181 aaaaagcccg cgagtggtac cgcagttgcg atccgctgct gatctatatt cgcgaattgg
      241 tcgaacggga gcaggccggg cgagacgaaa tcgccgctat cgagcgccaa gtcaaagccg
      301 agatcgccgc cgcggtggag ttcgccgtca atagtcccta tccaaaaccg gaagaagccg
      361 aaagagattt tttcgcctaa cttgatgaca aactttgctt acaggctgct caaaaagatc
      421 tcagatgcga ggcgcgcgat agatcgacga gcggaggcgt acttatcgtg tacgttggag
      481 cgaggcgatc gagcgcaacg aagcatatga gttttttcag cagcctgagg attgaacatg
      541 agagaacttg cctattacga agccaaattc gaagcgctgg aagaaatcat ggcggcggat
      601 cagagagtgc acctgatcaa cggaacgttt ttgagcttga gcccgcatcg ccatgtctac
      661 cagaatttga agaataaata cggcgagcgc atgatctcgc cgccgatctc ggagctgggc
      721 ttctgcggcc tagcgaccgg cgcggcgatg gcgggactcc ggcccatcgt cgacctcagc
      781 acgggaagtt ttatttacga agcctggccg caggtcgcca acgaagcagc caatgctttt
      841 tccatgtccg ccggccagac gcgcgtacct gtggtgtttc atttgtttca cggcctgcgc
      901 ggcggaggcg cggcgcagca ctccggcagc ccgcaagcga tgctgtggaa tgttcccgga
      961 ttggagatcg cgattccgtc ttcgccgcga gatgtcaaag gcttgctcaa gaccgcggtc
     1021 gccagtgaca atccgactat ttttgtcgat cacaccaggc ttctggatat ccgcggcgaa
     1081 attccggaca acgacaagcc cattcccttt ggcgttgccg atgtgaaacg ccagggtagc
     1141 gacgtcactt tggtcgcgac gtcgtacacc gtgcaggtgg gtctccaggc cgcggccaaa
     1201 ctggccaagg aaggtattga agtggaagtg gtagacccgc ggactattgt accgttcgat
     1261 ctggcgacca ttctcacttc aattgaaaaa actcatcgcg tcgtcatcgc cgatgaaact
     1321 caccagagct gcggcgtcgc ggcggagatt gccgcgcgca ttgccgagac cggctttgat
     1381 aaattgaaaa ctcgcatccg ccgcgtctcg acgctcgatg tccccgtgcc ctacagccct
     1441 cccttggaag cgcacatcgg cccttccgag tcgcgcatca tggaagcaat ccgcgcggcg
     1501 ctggcgtaag aatcgtttct ggtttcgggt ttgtagtttc gagtttccat aagccgcaaa
     1561 accacacctc gtccgcaatc gtcgctttgt cg
//
LOCUS       DATIRS010000465         3319 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_920307, whole genome shotgun sequence.
ACCESSION   DATIRS010000465 DATIRS010000000
VERSION     DATIRS010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3319)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3319)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3319
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_920307"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..934)
                     /locus_tag="VLM90_05890"
     CDS             complement(<1..934)
                     /locus_tag="VLM90_05890"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSQ12525.1"
                     /translation="MNQSKKSTKNKLTVADIPHVGAGTPAGEWFRRYWLVVGTVHELH
                     DIPQAVKVLGEELVLFRDSNGQLGLLGEHCPHRGTSLEYGDIEDGGLRCPYHGWLFDV
                     HGRCLEMPAEPEDSKFCEKVKQLSYPVRELGGLIFAYMGPEQANPPPLPQYAPLLERG
                     GQRQVEPVRQADYNWFNFFENSADPAHVCVLHRHAGYGQQSWGDHFFSYTDMPDVEFV
                     EMDYGMKVVMTKPGPRPGTEFVDEMSLALPGIVQVGDTEFVHAKMDAAALINEGSRCE
                     HWMFVTPNDDDHFMLFTADNYTGPVENFFERLKEM"
     gene            complement(1076..2449)
                     /locus_tag="VLM90_05895"
     CDS             complement(1076..2449)
                     /locus_tag="VLM90_05895"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ12526.1"
                     /translation="MDLREFLKVLEEEHELHKIKAEVDARHELGAICKIHNERANSPA
                     LLFEKVKGHSAPVVGQLLASDRRVALALGLSQENVFDETVRRANKPLPARLVPSGPCQ
                     EVVIEGDDVDVTKLPLCTNNPRDGGPYITAGHVILKDPEYGMNLSIYRMMLVSKNEVT
                     IRFTPGHDGYDFMKNAEKRGQKKFEVAVCVGVPPAVYVASQFEPRIGVYELEIAGGLA
                     GEAVDVVKCRTLDLEVPALTDYVLEGELTIPAKTGDEGPFGEFCGYTTQQVPGERIMT
                     IKAITHRRNPVYHNIWLGKPPHEHLYVDALTYAVAAYQELKPAYPALKKAYAPPWGVS
                     IVLLLQLEKRLMRPGIVDNILAASLYTRSGKWKHVFVVDEDIVMEDPNEVLWALTTRF
                     QPATDMFIIPRGITSSLEPSATVDGLTSKLMLDLTRKANFRGEVAEPTEGMREVVLQK
                     WQEYGFK"
     gene            complement(2633..>3319)
                     /locus_tag="VLM90_05900"
     CDS             complement(2633..>3319)
                     /locus_tag="VLM90_05900"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ12527.1"
                     /translation="ARQRFPYTETGFNVEAQRWELTDTVGDAERFNNNVAITNNVLAV
                     AQTAGVKKVVCGSSLAVYGLYYPVSALQPDYLPIDELHPLRPQDPYGLTKLLGEKLCD
                     ALSQRSGVAVTSLRFSGIYTEAHRPLLLERKKNPLARGTGALWSYIDARDAARACRVA
                     LEADLSGHQIFNIAAPHNLVNIPTRELIGRYLPQLSDLRIGLDGACSGYSVSKAKKVL
                     GFEANLSLVN"
BASE COUNT          679 a         1008 c          899 g          733 t
ORIGIN      
        1 gcatttcttt caagcgctca aagaaattct ccaccggccc ggtgtagttg tcagcggtga
       61 acagcatgaa atggtcgtcg tcgttgggcg tgacgaacat ccaatgctcg cagcgcgacc
      121 cttcgttgat caacgccgcc gcatccatct tggcatggac gaactcggtg tcgcccacct
      181 gcacgattcc cggtaaggcc aagctcatct cgtcgacgaa ttccgtccct ggccgcggcc
      241 caggcttggt catcaccact ttcatgccgt agtccatctc gacgaactcg acgtccggca
      301 tgtcggtgta gctaaaaaaa tgatcgcccc aggactgctg gccgtagccg gcgtggcgat
      361 ggagcacgca aacatgcgcc gggtcggcgg agttttcaaa aaaattgaac caattataat
      421 cggcctggcg caccggctcg acctggcgct ggccgccgcg ctcgagcagc ggcgcgtatt
      481 gcggcaacgg cggcggattc gcttgctccg gtcccatgta ggcgaagatc aacccgccca
      541 gctcgcgcac cggataggac agctgcttaa ccttctcgca gaatttgctg tcctcgggtt
      601 ccgccggcat ttccaagcag cggccgtgaa cgtcgaacag ccagccatga tacggacagc
      661 gcaatccgcc gtcttcgata tcgccatact caagcgaggt gccgcggtgc ggacaatgct
      721 cgccaagcaa acccagttgg ccgttgctat cgcgaaacag taccagctcc tcgccgagga
      781 ctttcaccgc ctggggaatg tcgtgcagtt catgcaccgt gccgaccacc agccagtagc
      841 ggcgaaacca ttccccggcc ggcgtgccgg caccgacgtg gggaatatcg gcaacggtca
      901 gtttattttt tgtcgacttt ttcgattgat tcacggtcaa ccttccagga taacggtacc
      961 gttcaaattt caacagttcg ggaaatacac tacgatcagt ccgagttccg aagtcagggt
     1021 ccgaaacggc ttgaacgaat tgaacgtatt gaacggcttg aacatgtttg gtgctttact
     1081 tgaatccata ctcctgccac ttctgcaaaa ccacttcgcg catcccctcc gtcggctcag
     1141 cgacttcgcc gcgaaagttg gccttacggg tcaagtcaag catcagcttc gacgttagcc
     1201 catcgactgt cgccgatggt tccagcgaac tggtgatgcc gcgcgggatg ataaacatat
     1261 cggtcgccgg ttgaaaccgg gtcgtcagcg cccacaagac ttcattggga tcttccatga
     1321 cgatatcttc gtcgacgacg aacacatgtt tccatttgcc gctgcgggta taaagcgaag
     1381 cggccaggat gttgtcgaca atgccgggac gcatgagacg tttttccagt tgcaacagca
     1441 acacgatcga cacgccccag ggcggcgcat aggctttttt caacgcggga taggccggtt
     1501 tcaactcttg ataggcggcc accgcatagg tcaaggcatc gacgtaaaga tgttcatgcg
     1561 gcggcttgcc gagccagata ttatgataga ccggattgcg ccgatgggtg atcgctttga
     1621 tcgtcatgat ccgctcgccc ggcacctgct gggtggtgta gccgcagaac tcgccgaagg
     1681 gaccttcgtc accggttttc gccggaatcg tcagctcgcc ttcgagcacg tagtccgtca
     1741 gcgccggcac ttcgaggtcc agggtccggc atttgaccac atccaccgct tccccggcca
     1801 agccgccggc aatttccaat tcatagacgc cgatgcgcgg ttcgaactgc gaagcgacgt
     1861 aaaccgccgg cggcacgccg acacagacag cgacttcgaa ttttttctgg ccgcgcttct
     1921 cggcgttttt catgaagtca taaccgtcgt gccccggagt aaaacgaatc gtcacctcgt
     1981 tcttcgacac caacatcatc cgatagatcg acaggttcat gccgtactcg ggatccttga
     2041 gaatcacatg gccggcggtg atatacggtc cgccgtcgcg cggattgttg gtgcacagcg
     2101 gcaacttcgt aacgtcgacg tcgtcccctt ctatgaccac ttcctggcat ggcccgctcg
     2161 gcaccagtcg cgccggcaac ggtttgttgg cgcgccgcac ggtctcatcg aagacgtttt
     2221 cctgcgataa acctaaggcc aacgcgacgc gccggtcgct cgccagcaac tgaccgacga
     2281 ctggagcgct gtggccttta accttttcga acaacagcgc cgggctgttg gcgcgctcgt
     2341 tgtggatctt gcaaatcgcg ccgagctcgt gcctggcatc gacctcggct ttgatcttat
     2401 gcagttcatg ctcttcttct aaaactttga gaaattcccg taggtccatc atgttacgtt
     2461 tttaactcct gccgcgagtt cctctgctga tcagacctca tcgttggcgt cttcgttcgt
     2521 catgccggcg aagaccggca tccaggttcg gcatcgccaa gcaagaaacc tggatttccg
     2581 atttcacggg aatgacggct gtatccatct cgttgaatca ctctttcccg agtcaattca
     2641 ccagcgacag gttcgcttcg aatcctaaaa cttttttcgc tttgcttaca ctatacccac
     2701 tgcaagcgcc gtccaagccg atgcgcaaat cgctaagctg cggcagatac cgtccgatca
     2761 gctcacgggt gggaatattc accagattgt gcggcgcggc aatattgaaa atctgatggc
     2821 cggataaatc agcttccaac gccacccggc aggcgcgcgc ggcatcgcgg gcatcgatgt
     2881 aactccacaa cgcgccggtg ccgcgcgcca gcggattttt cttgcgctca agcagcaacg
     2941 gccggtgcgc ttcggtatag atccccgaaa aacgcaggct ggtcaccgcg acaccgctcc
     3001 tttggcttaa cgcatcgcag agtttttcgc ccagcagttt ggtcagtcca taaggatctt
     3061 gcggccgcag tggatgcagt tcgtctatgg gtagatagtc cggttgcagc gcgctgactg
     3121 gataatacaa tccgtacacc gccaggctcg agccgcagac gacttttttt actccggcag
     3181 tctgcgccac ggccaacacg ttgttggtga tcgcgacgtt gttattgaag cgctcggcat
     3241 cgccgacggt gtcggtcagc tcccagcgct gcgcttcgac gttgaaaccg gtttccgtgt
     3301 acggaaagcg ctggcgggc
//
LOCUS       DATIRS010000466         2719 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_920310, whole genome shotgun sequence.
ACCESSION   DATIRS010000466 DATIRS010000000
VERSION     DATIRS010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2719)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2719)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2719
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_920310"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1344)
                     /locus_tag="VLM90_05905"
     CDS             complement(<1..1344)
                     /locus_tag="VLM90_05905"
                     /inference="COORDINATES: protein motif:HMM:NF039907.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HSQ12528.1"
                     /translation="MERCELNQELGRELLNIAMNKGASSGDFVMVEGDSFFVTVRMGE
                     VEKISQAGEKRLGVRLFLGNSSASASTSDISKKSLEKLIDDTVLMARATAQDPSGGLP
                     AAEMLARDIPDLDLIDSGARTIAVDDKIQIALATEKAALAYDARIINSEGAEFSNHFG
                     RVVYVSSHGFAGEYAGSTFGHSVSPVAKQDGAMQRDYWYSSTRKFANLESSQHVGERA
                     AQRVLRRLGGRKVKTCEVPVVFDPEMAASLLRSLASALSGYALYKGASFLAGKLGAKI
                     GSDLLTVIDDGTIVGGHGSRPFDAEGLPIKKKIVVEKGELKSYLLDTYSGKKLGMPST
                     GNASRSVGEPPGVSPANFYLSPGTQTPEQIVGSIKSGLYITEMIGSGVNMITGDYSRG
                     AAGMWIENGELAYPVEEITVAGNLKEMLLNIEMAGNDLEMRGRIAAPTVKLAKMTV"
     gene            complement(1519..>2719)
                     /gene="tldD"
                     /locus_tag="VLM90_05910"
     CDS             complement(1519..>2719)
                     /gene="tldD"
                     /locus_tag="VLM90_05910"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF008006.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HSQ12529.1"
                     /translation="DDITIENLEIAARTAQYIAQSRPAQLPAQIGQRTGAAHDLYAIK
                     TPVNDVPLDRKVSLLYEIDKLTRALDPRVKNVFASIGAEYKVILVASSQGLVVGDIQP
                     LTRLNVTCIVEENGNRQVGSFGGGGRVEFGFFVDGRDYERYAREAVRQAVLNLSAEDA
                     PAGTMDVVLGPGWPGILLHEAIGHGLEGDFNRKGTSAFSGRIGEKVASELCTVVDDGT
                     IPSRRGSINVDDEGTPTGRTTLIEKGILKGYLQDKLNAGLMKMALTGNGRRESYAHIP
                     MPRMTNTFMLAGESAPEDILRSVKKGLYAVSFGGGQVDITSGKFVFSASEAYLIEDGK
                     VTKPVKGATLIGNGPDVLTRVSMVGADLKLDEGVGTCGKDGQSVPVGVGMPTIKIDGL
                     TVGGTRA"
BASE COUNT          519 a          859 c          783 g          558 t
ORIGIN      
        1 cacggtcatc ttcgcaagct tcaccgtcgg cgcggcgatg cggccgcgca tttcgaggtc
       61 gttgccggcc atttcgatat tgagcaacat ttctttcaaa ttgccggcga cggtgatttc
      121 ctctactgga taggcgagct cgccgttttc aatccacatg ccggcggcgc cccgagagta
      181 gtcgccggtg atcatgttga cgccggagcc gatcatttcg gtgatataca aacctgattt
      241 aatcgagccg acgatctgct cgggcgtctg cgtgccgggg ctgaggtaaa aattggctgg
      301 cgatacgccg gggggctcgc cgaccgagcg cgaggcgttg ccggtggacg gcatgcctag
      361 cttcttgccg ctataggtgt cgagcaaata acttttcagc tcgccctttt cgacgacgat
      421 tttctttttg atcggcaacc cttcggcatc gaaagggcgc gagccatggc cgccgacgat
      481 ggtgccgtca tcgatcaccg tcaatagatc cgagccgatc ttcgcgccga gcttgccggc
      541 caaaaacgac gcgcctttgt acagcgcgta gcccgacagc gccgacgcca agctgcgcaa
      601 cagcgatgcg gccatttccg gatcgaaaac caccggaacc tcgcaggtct tcaccttgcg
      661 cccgcccaac cggcgcagca cgcgctgggc ggctctttca ccgacatgtt gcgacgattc
      721 tagattggcg aacttccgcg tcgaggaata ccagtaatcg cgctgcatcg cgccgtcctg
      781 cttcgccacc ggcgacaccg aatggccgaa ggtcgaaccg gcatattcgc cggcaaagcc
      841 gtgactgctg acatagacga cccggccgaa atgattggaa aactccgcgc cctcggagtt
      901 gatgatgcgc gcgtcgtaag cgagcgcggc tttctcggtc gccaaggcga tctgaatctt
      961 gtcgtcgacg gcgatagttc gcgcgccgct atcgatcaga tcgagatccg ggatatcccg
     1021 cgccaacatc tccgcagccg gcaacccgcc gctgggatcc tgagcggtgg cgcgggccat
     1081 cagcaccgtg tcgtcgatca gcttttcaag cgatttcttc gatatatccg aggtcgatgc
     1141 cgacgccgag ctgttgccga gaaacaagcg cacgcccaac cgcttctcgc cggcctggct
     1201 gatcttttcg acctcgccca tgcgcacggt gacgaaaaac gaatcgccct cgaccatcac
     1261 gaaatcgccc gaagaggcgc ccttgttcat cgcaatgttg agcaattcgc ggccaagttc
     1321 ttggtttaat tcgcagcgtt ccatggaatc tccaattgaa ggttcaaatc gttcaacctg
     1381 ctcaaccgct gcgctccgtt caatccccct ccttgatcct cccccgcgac gcgggggaga
     1441 aaaagcccac gcggttcggc ttcgaagaaa ggtgggggct tgagcgattt gaacggcttg
     1501 aacgttttga acgattattt acgccctcgt cccacccacc gtcagtccat cgatcttgat
     1561 cgtcggcatg ccgacgccga cgggcaccga ctgaccatcc ttgccgcagg tgccgacgcc
     1621 ttcgtcgagc ttcaagtccg cgccgaccat cgacacccgc gtcagcacat ccggcccgtt
     1681 gccgatcaga gtcgcgccct tcaccggttt ggtgaccttg ccgtcttcga tcaagtacgc
     1741 ctcgctggcg gaaaatacga atttgccgct ggtgatatcg acctggccgc cgccgaagga
     1801 aaccgcgtaa aggccttttt taaccgaacg caaaatatct tccggcgccg actcgccggc
     1861 gagcatgaag gtgttggtca tgcgcggcat gggaatatgc gcgtagcttt cgcgccggcc
     1921 gttgccggtg agcgccattt tcatcaagcc ggcgttaagc ttgtcctgca aatagccttt
     1981 gagaatgcct ttctcgatca gcgtggttcg gcccgtgggc gtgccctcat catcgacgtt
     2041 gatcgagccg cgccgcgatg ggatcgtgcc gtcgtcgacc acggtgcaca gctcggaggc
     2101 gactttttcg ccgatgcggc cactgaaagc cgaagtccct ttgcggttga agtcgccttc
     2161 gaggccatga ccgatggctt cgtgcaataa aatacccggc cagccggggc caagcaccac
     2221 atccatagtt cccgccggcg cgtcttcggc gctcaggttc aacaccgcct gccgcaccgc
     2281 ttcgcgggcg taacgttcgt agtcgcggcc gtcgacaaag aaaccgaact cgacccgccc
     2341 gccgccgccg aaactgccga cctggcggtt gccgttttcc tcgacgatgc aggtgacgtt
     2401 aaggcgcgtc agcggctgga tgtcgccaac caccaagccc tgcgacgagg cgaccagaat
     2461 cactttgtac tcagcgccga tggaggcaaa gacatttttc acccgcggat cgagggcccg
     2521 ggtaagctta tcgatctcgt agagcaggga aactttccgg tccaaaggaa catcgttgac
     2581 cggggtcttg atcgcgtaga gatcatgggc cgcgccagtg cgctggccaa tttgcgccgg
     2641 cagttgggcc ggccggctct gggcgatgta ttgcgccgtg cgggcggcga tctccagatt
     2701 ttcgatagta atgtcgtcg
//
LOCUS       DATIRS010000467         4105 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_920456, whole genome shotgun sequence.
ACCESSION   DATIRS010000467 DATIRS010000000
VERSION     DATIRS010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4105)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4105)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4105
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_920456"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(580..1716)
                     /locus_tag="VLM90_05915"
     CDS             complement(580..1716)
                     /locus_tag="VLM90_05915"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12530.1"
                     /translation="MTYMMISADDHIDLGYLPRDLWTERLPASLRDRAPHVEDRGDKG
                     EYWVCDGETWSDYRGERWFARENRTRLALDRGGVGEAHRPTTTAKRLTDMDRDGVEAS
                     LMFPPIIAMQVGAPDLRNACVQAYNDWALDFGKTAPKRFFPVAMLSSCDAEAARDEVI
                     RVAKLGFKEANFLVNDVTLEMNLKPWDIFWAAAEDAGIVVSYHVGGSTQSGTVRATID
                     SIKPGERQGVFDMGLSNGATSFFNPFVNMFNFGTLERHPKLKFCLAESAIGWIPFVVQ
                     EMDYRYKRQFERRKAAEIPLKNMPSEIFKRQVWATYQTDLVGLHLVDFFGDGHIMWGS
                     DYPHPDSTWPFSKDVIEKDSAHLKDDVKKKVLRDNAAALYGLAN"
     gene            complement(1792..2928)
                     /locus_tag="VLM90_05920"
     CDS             complement(1792..2928)
                     /locus_tag="VLM90_05920"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12531.1"
                     /translation="MVAPILLDADSHVSEPLNLWRERLPVKYRDIAPHMETTYKGRPG
                     AWWHIEADREPHNVILGFGANKTIEELQELLKSFSYAGAHRGGWDPAQRLKDMDQDGV
                     TGDVLYTTLGFRMFWIKDAGFQRACFQVYNDWLAEFCAHSPKRLKGLALISLYDPQQA
                     AKDLAECAKKGLAGAVIWASPPEELPFHSDSYDPFWAAAQELKMPLSLHEFAGFQWVD
                     WDSNSKKRTIAQAINSHEVEQTFSTLIISGVLERFPALKVVSAELNCGWLPFFLHRID
                     ERFDHRGIRFRGTPFATKLTLKPSDYFRRQLYATFIDDTFGLALRENIGVENILWSSD
                     FPHSATFWPKSREKIAADFQNIGAQDCEKILCRNTAALYGFDLH"
     gene            3121..3591
                     /locus_tag="VLM90_05925"
     CDS             3121..3591
                     /locus_tag="VLM90_05925"
                     /inference="COORDINATES: protein motif:HMM:NF019003.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050485 - oxidoreductase activity, acting
                     on X-H and Y-H to form an X-Y bond, with a disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine/sarcosine/betaine reductase
                     selenoprotein B family protein"
                     /protein_id="HSQ12532.1"
                     /translation="MPFSYVQFMTELMAPLPYPRQPNFAPPPLAPLRKPIGQSTIGIF
                     TSAGIQVRGEPALNETNDLTYRLIDGATPYSDLTVAHQTPVRSWALDDLNVAFPRDRL
                     VELEAEGTIGKLAPKAVSMVGSISKFTELIKTTAPRIKAEFDAQGVDLVFLFPF"
     gene            3646..4002
                     /locus_tag="VLM90_05930"
     CDS             3646..4002
                     /locus_tag="VLM90_05930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12533.1"
                     /translation="MPTLSMSTLWEVSLAFKPPRTVFLDFPLGCPAGKPHEPEMQRAI
                     LRSALAAAPEFGEAWRMEMLPFQWSADGKRQWEEEVKELYRRGLSTVSRHVADHQAIG
                     ESLLDKEKEFSIRCRC"
BASE COUNT          858 a         1152 c         1236 g          859 t
ORIGIN      
        1 agttatccaa gatttccggc aagactaaca gcggcgcgag cggatcgaag agctgattct
       61 tgtaaaaagt gtagagcgat gtcggaccgc cgagataaac gtcggcgagg tatttgccgg
      121 cgcgccgttc ggcaaacaat cgcggcgaga tgcggctgct gttgccatgc acgagggtga
      181 ctttgatctc tggataggcg acttgaaact cggcgaagat gcgtgggtga taagggccga
      241 tggcggcgta gatgaaaatc tgcgcttctt ttttggccgc ttggattgtc gcttcccagt
      301 ccgcctgcta ggaaggcttc tcggcggcaa atgacgcgcc gggggataag acttggaggc
      361 cgaataacag cgcgacctgg agggcaaact tgagttgttg caacacaaga tctcctgtcg
      421 tgatgggtga gaacatgcaa cgcacgccgg ccacaggaca caaagcgaag agggcgggtt
      481 tcaaacccgc ccctacgttt cggaattcct tctctcttct atgcgttcta tgcggccaac
      541 agcccgattc cgaatgatcc tctcggatct agccggacct tagtttgcca gcccgtacaa
      601 cgccgcggcg ttgtcgcgta gcaccttctt cttgacgtcg tctttcaggt gcgccgaatc
      661 cttctcgata acgtccttgg agaacggcca ggtgctgtct ggatgcggat agtccgagcc
      721 ccacatgata tggccgtcgc cgaagaagtc gaccaagtga agtccgacca agtcggtttg
      781 ataggtggcc cagacttggc gcttgaagat ttcgctcggc atattcttga gcgggatctc
      841 ggcggccttg cgacgctcga actggcgttt gtagcggtag tccatttcct ggacgacgaa
      901 gggaatccag ccgatggccg attcggcgag gcagaatttt aacttgggat ggcgttccaa
      961 agttccgaag ttgaacatgt tgacgaaggg attgaagaac gacgtggcgc cattgctcag
     1021 ccccatgtcg aaaacgccct gacgctcgcc gggtttgatc gagtcgatgg tcgcgcgcac
     1081 ggttccagac tgcgtgctgc cgccaacgtg atacgacacg acgatgccgg cgtcctcggc
     1141 ggcggcccag aaaatatccc agggctttag gttcatttcc agagtgacgt cgttaactaa
     1201 gaagttagct tctttgaaac ccaacttggc gacccggatc acttcgtcgc gtgccgcctc
     1261 agcgtcgcag ctggacagca tggccacggg gaaaaaccgc ttcggcgcgg tcttgccgaa
     1321 gtcgagcgcc cagtcgttgt aggcctgcac gcaggcgttg cgcaaatcag gcgcgccgac
     1381 ttgcatggcg atgatcggtg gaaacattaa cgacgcttcg acaccgtcgc ggtccatgtc
     1441 ggtgagccgc ttcgcggtgg tcgtcggacg gtgcgcctcg ccgacgccgc cgcggtcgag
     1501 ggcgagtctg gtgcgatttt ctctggcgaa ccagcgttcg ccgcgataat cggaccaggt
     1561 ctcaccgtcg cacacccagt actcgccttt atcgccgcgg tcttcgacat ggggcgcgcg
     1621 gtcgcgcaga gacgcgggca agcgctcggt ccataagtcc cgcggcaggt atcctaaatc
     1681 gatatgatcg tcggcggaaa tcatcatgta ggtcatgtct ttctcctctt ggtaaaaagt
     1741 tagcgggtaa tgtgaattcc tttttatccc gtcgggcagt cgagattcaa ctcagtggag
     1801 atcaaaaccg tagagcgccg cggtattcct gcaaagaatt ttctcgcagt cctgggcgcc
     1861 gatgttttgg aaatcagcgg cgattttctc ccgcgacttg ggccagaagg tcgcgctatg
     1921 gggaaagtcc gaggaccaga gaatgttttc cacgccgatg ttttcccgca gggcgaggcc
     1981 gaaggtgtcg tcgataaacg tcgcgtagag ctggcggcga aaatagtcgc tcggcttgag
     2041 cgtcagcttg gtggcgaagg gcgtgccgcg aaagcggatg ccacggtgat cgaaacgctc
     2101 gtcgatgcgg tgcagaaaaa aaggcagcca gccgcaattc aactccgccg aaactacctt
     2161 gagtgcggga aagcgctcga gcacgccgga tatgatcaac gtcgaaaagg tttgctcaac
     2221 ttcatgagaa ttgatcgctt gggcaatggt gcgcttcttc gagtttgagt cccagtcgac
     2281 ccactggaag ccggcaaact catggaggct gagcggcatc ttgagttcct gcgccgcggc
     2341 ccaaaacggg tcgtagctgt ccgagtgaaa cggcagctcc tcgggcggcg aggcccagat
     2401 caccgcgccg gcgagcccct ttttcgcaca ctcggccagg tccttcgcag cttgctgcgg
     2461 atcgtagagc gagatcagcg ccagcccttt caaacgcttg ggcgagtggg cgcaaaactc
     2521 ggctaaccag tcgttgtaga cctgaaagca agcgcgttga aaacccgcgt ccttgatcca
     2581 aaacatgcga aaaccaagcg tcgtgtagag cacatcgccg gtgacgccgt cctggtccat
     2641 gtccttcaag cgctgcgccg ggtcccagcc gccgcgatgg gcgccggcgt aggaaaagct
     2701 tttgagcaac tcctgtaatt cttcaatcgt cttgttggcg ccgaagccca agatcacatt
     2761 gtgcggctcg cgatccgctt cgatatgcca ccaggcgccc ggccgccctt tgtacgtggt
     2821 ttccatgtgc ggcgcgatgt cgcggtattt taccggcaag cgctcgcgcc acaaattcaa
     2881 aggctcgctt acgtgagaat cggcatccaa caatataggt gcgaccatga ctcactccta
     2941 tggctctcgc gaataagttt tccgccggca agatgccatc gttccaatgc ggtgactcgg
     3001 gctaacgtag gacggattca aacagcgagt caagacatcg tcgggcacaa gccgacaaat
     3061 gaccttgacg gcggcgcgcg aaagcaaata ttgatagcag gcaagaacag gaggagagct
     3121 atgccgttca gctacgtcca gttcatgacc gagttgatgg cgccgctgcc gtatcctcgc
     3181 cagccgaatt ttgcgccgcc gccgctggcg ccgctgcgca aacccatcgg ccaatcgacc
     3241 atcggcattt tcaccagcgc cgggattcag gtgcgcggtg aaccggcatt gaatgagacc
     3301 aatgacctca cttatcgcct gatcgatggt gcaacaccgt actcggatct cacggtcgcg
     3361 catcagacgc cggtgcgaag ctgggcgctc gatgatctca acgtcgcatt cccgcgcgac
     3421 cggttggtcg agttggaagc tgaaggcacg atcggcaagc tggcgccgaa agcggtttcc
     3481 atggtgggct cgatttccaa gtttaccgaa ttgataaaga ccacggcgcc gcggatcaaa
     3541 gcggaattcg atgcgcaggg cgtcgacctg gtttttctct tcccgttctg accggcctgc
     3601 catcggtccg tcggactgat cgcaagagcg ctggaagcga gtgggttgcc gaccctgtcc
     3661 atgagcacgc tttgggaggt cagcctggcc ttcaagccgc cgcgtacggt ctttttggat
     3721 tttcctctcg gctgtccggc gggcaagccc cacgagccgg aaatgcagcg cgccattctt
     3781 cgatcggcct tggcagcggc gccggaattc ggcgaggcat ggcgcatgga gatgctgccg
     3841 tttcagtggt cggcggatgg caagcgccaa tgggaagaag aggtcaaaga gctatatcgc
     3901 cgcggactga gcacggtatc gcgccacgtc gccgatcatc aggcaatagg cgaatcgctg
     3961 ctcgataaag agaaggaatt ttcaatccgc tgtcggtgtt agcgtcagct agcgtctcct
     4021 gtaaacctga tcgacgaatc cttccttcac cagacggtcg atgatcgaat tatcggcgaa
     4081 ggtttcgatg ggtaaacctt tcttg
//
LOCUS       DATIRS010000468         2802 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1903263, whole genome shotgun sequence.
ACCESSION   DATIRS010000468 DATIRS010000000
VERSION     DATIRS010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2802
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1903263"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1002
                     /locus_tag="VLM90_05935"
     CDS             <1..1002
                     /locus_tag="VLM90_05935"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12534.1"
                     /translation="DHPMRRRVKPWVALTLFLVVGPVVSRAAVAADGAVLRSNYSGIS
                     AGFVPVWIAYDKGLFTKHGLNIDLQYIAPATATQGLLAKSLDVVNPGGEIIEAALSGE
                     PVVYMAGVLNRAVLSIYSKPELKSLADLKGKTIAVTVPGSTTDFTARIMLQQVGLTAG
                     KDVKILYLKGQPQILQGVQQGHAEAGIFSSPTTLKAGHAGLKELVNITEKNVPMIHAA
                     FASTREFMKGQRDQVRRFMQGYIEGIKVARNDPELAKQVIAKYTKTDDKQDLDDSYKT
                     NFSAWERAPYVSLPAVQTMLNFANHPAGKSAKPEQFVDNSVIAELEKSGFIDRLYKQ"
     gene            1161..1652
                     /locus_tag="VLM90_05940"
     CDS             1161..1652
                     /locus_tag="VLM90_05940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12535.1"
                     /translation="MFEGWSYSQVLRVIGQSLEERDVQDFSLQWQDGEFVLHCKRIAR
                     LEQRWLGKILGHKVGRSERSVEIHYSLKSILWLQIRGETMRKDPNLVPDYFRLSQTLR
                     TVGNYAEHRTMPLLSLRRSGGILYLEFQERGGKQRVEEHAMGSFENYFLRTYLRQRKA
                     LQA"
     gene            1675..2517
                     /locus_tag="VLM90_05945"
     CDS             1675..2517
                     /locus_tag="VLM90_05945"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HSQ12536.1"
                     /translation="MERVGMIGTGAMGLALLERLKLAGVGEVACFDAYPPALAAASAM
                     GFTPLASAAAVAARSTLIDIVVRTDQDMLDCMLGADGVIQAAVPGTLVLLHSSILPQT
                     VKTVEAAARAKGIHIVDACMTGVPDTVRAGKLSFVVGGADEWVERAKPHLLKMSQEVF
                     HMGPVGTGAVGKLIKNMLGGAETLIVHEAIQIGIAGGIPYPKALEMMRRIGHDSVLNR
                     WQRTFDPSGNDPLPKSGRNVLNKDIPLVAELARLLKTDTPITEQLAAAADRVVSANEK
                     RNKR"
BASE COUNT          601 a          777 c          864 g          560 t
ORIGIN      
        1 gatcatccga tgcgcaggag agttaaacct tgggtggcgt tgacgctatt tctagtggtt
       61 ggaccggttg tgtctcgtgc cgctgtcgcc gccgatggcg cggtgctgcg ctccaactat
      121 tccggcatca gcgctggctt cgtgccggtt tggatcgcct acgacaaggg gcttttcacc
      181 aagcatggct tgaacatcga cctgcaatac atcgccccgg ccacggcgac gcagggcctg
      241 ttggccaaga gcctggacgt ggtcaatccc ggcggcgaaa ttattgaggc ggcgctcagc
      301 ggcgagccgg tggtttacat ggccggggtg ttgaaccgtg cggtgttgtc gatctattcc
      361 aagcctgagc tcaaatccct cgccgatctc aaaggcaaaa ctatcgcggt cacggttccc
      421 ggctcgacca ccgattttac cgcccgcatc atgttgcagc aggttggcct gacggccggc
      481 aaggatgtga aaattctcta cttgaagggc caaccgcaga ttctccaggg ggtgcagcaa
      541 ggccacgccg aggcgggaat tttctcatcg ccgacgaccc tcaaggcagg ccatgccgga
      601 ctgaaggagt tggtcaatat taccgagaaa aatgtgccga tgattcacgc ggcgttcgcc
      661 tcgacccgcg aattcatgaa aggccagcgc gaccaggtgc gccgcttcat gcagggttac
      721 atcgaaggga tcaaagtcgc gcgcaacgat cccgaactcg ccaaacaagt gatcgccaag
      781 tacaccaaga ccgacgacaa gcaggatttg gacgattcct acaagaccaa cttcagcgcc
      841 tgggaacgcg cgccttatgt atcgctgccg gcggtgcaga ccatgctcaa cttcgccaat
      901 catccggcgg gcaagagcgc gaagcccgag cagttcgtcg acaattcggt gatcgccgag
      961 ctggaaaagt ccggcttcat tgatcgactc tacaaacaat agctgctatc tggttgggta
     1021 atcgtcgggg tgcggtcgac gccgctccgg tgtcgctgtg ccagggatag gatagctggg
     1081 caagggccat tgggcgttac cggcaatttt gttcggtgaa tttgccgatg gcctgcgtag
     1141 ctctggagtt ttattggctt atgtttgagg gatggtctta ttcccaagtc ctgcgcgtca
     1201 tcggccaatc tttggaagaa cgcgacgtgc aggatttctc gttgcaatgg caggatggcg
     1261 aattcgtctt gcactgcaaa cggattgcgc ggttggagca acgttggctc ggcaaaatcc
     1321 tcggtcacaa ggttggtcgc agcgagcgca gcgtggaaat tcattactcg ttgaagagta
     1381 ttctttggct ccagatccgc ggcgagacca tgcgcaaaga ccccaacctc gttcccgatt
     1441 attttcgcct gtcgcaaacc ctgcgcaccg tcggcaacta cgccgaacat cgcaccatgc
     1501 cgctgctgtc cttacggcgc agcggcggga ttttgtacct cgaattccaa gaacgcggcg
     1561 gcaaacaacg cgtggaagag catgccatgg gatcgtttga gaattatttt ctgcgcacct
     1621 atctgcgcca gcgcaaggcg ctccaggctt gaagcgccag ggcggggagt cgctatggaa
     1681 cgagtcggca tgatcggcac cggcgccatg ggtttggcgc tcttggaacg gctcaaactt
     1741 gccggcgtcg gcgaggtggc gtgcttcgat gcttatccac ctgcgttggc ggcggcgagc
     1801 gccatgggat ttactccgct tgccagcgcg gcggcagtgg cggcgcgatc gaccttgatc
     1861 gatatcgtcg tgcgcacgga ccaggatatg ctggattgca tgcttggcgc ggacggggtg
     1921 attcaggcgg ccgtgccggg gacgctggtg ctgctgcata gttcgattct gccgcagacg
     1981 gtcaagactg tggaagccgc ggcgcgggcc aaaggcattc acatcgtcga cgcctgcatg
     2041 actggcgtgc cggacactgt gcgcgccggc aagctgagct tcgtggtcgg cggagcggat
     2101 gaatgggtcg agcgcgccaa gccgcatctg ctcaagatga gccaggaagt gtttcacatg
     2161 gggccggtgg gcacgggcgc cgtgggcaaa ttgatcaaga acatgctcgg cggcgccgaa
     2221 acgctgatcg tccatgaagc gattcaaatc ggcatcgccg gcggcatccc gtatcccaag
     2281 gcgctggaaa tgatgcggcg catcggccac gacagtgtcc tcaatcgttg gcaacgcacc
     2341 ttcgatccga gcggcaacga tccgctgccg aaatcggggc gcaatgtgtt gaacaaagat
     2401 attccacttg tggccgagtt ggcgcggcta ctcaagaccg acacgccgat caccgaacag
     2461 ctcgccgccg cggccgatcg cgtcgtcagc gccaatgaaa aaagaaataa acggtgagcc
     2521 aaactgtaac cggcactcgg aatatctccc gcaaaggcgc aaagccgcaa aggtggcggg
     2581 ccgaaggccg gtatcggagc gagcccgagg gatccaagga ggatttctcc cggagtttaa
     2641 cctgagtttg tcgaaggagt cgaaatcaca aagactccga actttgcgtc cttgcgactt
     2701 ggcgggagaa ttatccgaat ccgcaaacca atcgacgatg gtaaaaatag agaggaagaa
     2761 gggcaatcgt gaaatgcagt ctatttactg aaatccaatg tc
//
LOCUS       DATIRS010000469         1935 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_920851, whole genome shotgun sequence.
ACCESSION   DATIRS010000469 DATIRS010000000
VERSION     DATIRS010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1935)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1935)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1935
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_920851"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1707
                     /locus_tag="VLM90_05950"
     CDS             <1..1707
                     /locus_tag="VLM90_05950"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HSQ12537.1"
                     /translation="AKASVLNGQLAMTGTQGLNLTVDRFPLEGLATFFSQQPPMTGLV
                     ALRAQVGGTAAAPEITGTINLTDAKIGGQSYAGLVADLSYRERQGNLNLTVRQDATHT
                     LTATGRLPLLVSWHDGWRSDITGDMELRVQSAGLSLAFLNAYTAKTVSDLGGEISVDL
                     TARGRPAAPALSGSFRLRDGKLKATLLNVPVDSVTAEGSFDARVIRIQKLSARANDGN
                     FSGSGLLTLQNYQIDNFKLSLAARRWPAIETRRYRAQIGGAVEIDGSPAAPRITGKID
                     VTEADLRPDLAFLERSSTAVKRDATIVVVNRDGSERVAPVRTSSNNGFGESELFKALT
                     LDLTLRMPNNVRVRHADASAELRGNIHATKKPGQALQLVGNSEIIRGWATFQGRRFDI
                     VRGDIEFIGGGKIDPALDILAQHRLPQYTVEALVGGTVEKPTLVLRSDPILDQSDILA
                     LLVFGKPTKDLNSSEQVSLKQSALDVTTGFAAANIGAAIADAIGLESLGVGEVNFDGG
                     RVGVGRYLGRRTYVTVNQELAGERGQQASVEVQLAPDWKIGTSTSTKGASEVELIWHK
                     RY"
BASE COUNT          408 a          555 c          584 g          388 t
ORIGIN      
        1 gccaaagcct cggtgctaaa cggccaactc gccatgaccg ggactcaggg gttgaacctg
       61 accgtcgata ggtttccgct cgaaggactg gcgacgttct tttcgcagca accgccgatg
      121 actggactgg tggcgctgcg cgctcaggtc ggcggcacgg cggcggcgcc ggagatcaca
      181 gggacgatta atttgaccga tgcgaaaatc ggcgggcaaa gctatgccgg cctggtcgcc
      241 gatctcagtt atcgagaacg acagggaaat ctaaatctca cggtgcgcca agatgctacg
      301 cacactctca cggccaccgg ccggctacct ttgttggtga gttggcatga cggatggcgc
      361 tcggacatca ccggcgacat ggagctgcgc gtccaatccg ccggtctgag cctggcgttt
      421 ctcaacgcct acacggcaaa gaccgtcagc gacctgggtg gcgagatcag tgtcgatttg
      481 accgcgcgcg gccggccggc ggcgccagcg ctaagcggct cgtttcgtct gcgcgatggc
      541 aagctcaagg caacactgct caatgtgccg gttgattcgg ttaccgccga gggcagcttc
      601 gatgcgcgcg tgatccgcat tcaaaagctc tcggcgcgcg ccaacgacgg aaacttcagc
      661 ggcagcggcc tgctgacgtt gcagaactat caaatcgata attttaaact gtccctggcc
      721 gcgcgccgct ggccggcgat cgaaacccgg cgctatcgcg cgcagattgg cggcgccgtt
      781 gaaattgacg gctcaccggc ggcgccaagg atcaccggaa agatcgacgt cacggaggcc
      841 gatttgcggc cggatctcgc tttcctcgaa cgaagctcaa ccgcggttaa acgcgatgcg
      901 acgatcgtgg tcgtgaaccg ggacggtagc gagcgggtag cgccggtgag aacaagctca
      961 aataatggat tcggcgaaag cgagctattc aaagcgctca cgttggatct gacgctacgc
     1021 atgccgaata atgtccgggt caggcatgcc gacgcatcgg cggagcttcg aggcaatatt
     1081 cacgcgacga aaaaacccgg ccaggctctg caactcgtcg gcaacagtga aatcattcgt
     1141 ggctgggcca ccttccaagg ccggcgtttc gatatcgttc gcggcgatat cgaattcatt
     1201 ggcggcggca agatcgaccc tgctctggac atcctggcac agcaccgtct accgcagtac
     1261 acggtcgagg cgctggtcgg cggcacggtt gaaaaaccca cgctggtgct gcgcagcgat
     1321 ccgatcctgg atcagtcgga tatcctcgcg ctcttggtat tcggcaaacc gaccaaggat
     1381 cttaacagca gcgagcaagt ttcgctcaag caaagtgccc tggatgtgac caccggtttc
     1441 gccgcggcga acatcggtgc cgccatcgcg gacgccatcg gtctggaaag cttgggcgtt
     1501 ggcgaggtta attttgacgg cggccgcgtc ggcgtgggcc gttatctcgg ccgccgcacc
     1561 tacgttacgg tcaatcagga gttggccggc gagcgaggtc aacaggcctc ggtggaggtt
     1621 caactagcgc cggattggaa gatcggtacg tcgactagca ctaagggtgc gagcgaagtc
     1681 gaactgattt ggcataaacg atattagcga acgataattt ttcctgtgtc ggttggtcat
     1741 agtcactcgt ccgccagctc cctgaaatag ctcacgaaag gttttgagca atcgctttca
     1801 ttcccagaaa gctcggcgtc agtttcaatt gctccgcaac tttgaacaac tcagtatgac
     1861 tgtacatgtt gttcactacc tttgcggaat gatctctgta aacgccgctc atctttgtcg
     1921 ctaaattgtt tggcc
//
LOCUS       DATIRS010000470         2108 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1216021, whole genome shotgun sequence.
ACCESSION   DATIRS010000470 DATIRS010000000
VERSION     DATIRS010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2108)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2108)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2108
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1216021"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            98..889
                     /locus_tag="VLM90_05955"
     CDS             98..889
                     /locus_tag="VLM90_05955"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HSQ12538.1"
                     /translation="MAERVWDKFLTEQDKATLVGKADRRIGFGERPALLLIDLYRWVF
                     GDKPEAVTEGIKTWPGSCGLSGWNALPHIQKLLAKCREVGIPIIHVTGMDGVAVEPWA
                     FRRDTKKRATMSAEELDRLRRRYDIVDEVKPIPGETVFKKVSPSAFWGTPLVGHLNFL
                     GVDTIITCGESTSGCVRASVVDGTTNRLRMVVAEECVFDRHEACHAINLFDMNQKYAD
                     VLPLDEILKYLDGWRAEKSGQVGYANNSMEYLKDLAIGEDYKGLR"
     gene            complement(938..>2108)
                     /locus_tag="VLM90_05960"
     CDS             complement(938..>2108)
                     /locus_tag="VLM90_05960"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12539.1"
                     /translation="LAAIVQIAGSSGAAMLAPFFMKDHGYSIAAASVPLVVNGVGRVC
                     SDLTSGVLASYFSSGVLIVAASAVSIVIAALAHFFIDSPVVFLGAFTLLGITEAMFAL
                     SIRKIAFEESEPGQQGRVQGQVAAALGIGFSLGPLTAGFVGKIFGPQMLFAFYALPQA
                     LGLILILLGGAHRSRAITQETSVQLWREGKILLTRPSFLALSLAVFQSFVMLVGVTRI
                     AFPFLAVNQRGLGLDWVGTVVSISRITDTFGRYTGGWLCDRITPPRVILLGIAIGIPM
                     FIIQPYGSGVLMLVLPLTIMTMGFGYSNVGATTFALQSAGPNAKALALGLTRSCTSLG
                     NTLGPLMAGLLVQNFGYETGYHGMAVISAAILVVAWLGLRKRNTRSTVQGSKVQS"
BASE COUNT          474 a          571 c          671 g          392 t
ORIGIN      
        1 agataatctt gaattcagtt gcagccgcac caggcgatct tgacgatcga agcggcgcgg
       61 tgataagtct tggctcaatt ctatacggag gtgctgcatg gctgagcgtg tttgggacaa
      121 atttctcacg gaacaagaca aggcgacttt ggttggcaag gcggatcggc gcatcggctt
      181 cggcgagcgg ccggcgttgt tgctgatcga tctgtatcgc tgggtgtttg gcgataagcc
      241 ggaggccgtg accgagggga tcaagacttg gccggggagt tgcggtctct ccgggtggaa
      301 cgctttgccg catattcaga aactgcttgc caagtgccgc gaggttggta ttccgatcat
      361 tcatgttacc ggcatggacg gcgtcgccgt cgagccttgg gcgtttcgcc gcgacaccaa
      421 gaagcgcgcg accatgagcg ccgaggagct ggaccgttta cgccgccgtt acgacatcgt
      481 cgacgaggtc aaaccgatcc ccggtgagac cgtgttcaag aaagtttcgc cgagcgcttt
      541 ctggggcacg ccgctggtcg gccacttaaa ctttctcggc gtcgatacca tcatcacttg
      601 cggcgagagc accagcggtt gcgtgcgcgc cagcgtcgtc gacggcacga ccaatcggct
      661 gcgcatggtg gtcgccgagg agtgcgtgtt cgatcgccat gaagcctgcc acgcgatcaa
      721 cctgttcgac atgaatcaga aatacgccga cgttttgccg ctcgacgaga tactcaaata
      781 tcttgacggc tggcgcgccg agaagtccgg ccaggtcggt tacgcgaaca acagtatgga
      841 gtacctcaaa gatctcgcca tcggcgagga ttacaaggga ttgcgctagc gcaatcccgt
      901 tcaaggttca aaggttcaag gtttcggaat ccggattcta actttgaact tttgaacctt
      961 gaactgtcga acgagtgttt cgttttctca accccagcca ggcgacgacc agtatcgctg
     1021 cggatattac ggccatgccg tgatagccgg tttcataacc aaaattctgc accaataaac
     1081 ctgccatcaa cggtcccaag gtgtttccca gggatgtgca ggagcgggta aggcccaaag
     1141 cgagcgcttt ggcgttgggc cccgccgatt gcagggcgaa ggtggtggcg ccgacgttcg
     1201 aatagccgaa gcccatcgtc atgatcgtca gcggaagcac cagcattaaa actccggagc
     1261 cgtagggttg gatgatgaac atcgggatgc cgatggcgat gcccagtaat atcacccgcg
     1321 gcggggtgat gcggtcgcac agccagccgc cggtgtagcg accgaaggtg tcggttatgc
     1381 gcgagatcga taccacggtg ccgacccagt ccaagcctaa gccgcgttga ttgacggcga
     1441 gaaacggaaa cgcgatgcgg gtgacgccga ccaacatgac gaacgactga aacacggcca
     1501 gcgacaaggc gaggaacgaa ggcctcgtca gcaagatttt gccttcgcgc cagagttgca
     1561 ccgatgtttc ctgggtgatg gcgcgggagc gatgggcgcc gccgagaaga atcagaatca
     1621 accccagagc ttgcggcaag gcgtagaagg cgaacagcat ttgcggtcca aagattttgc
     1681 cgacaaagcc ggcggtcaat gggcccaggg aaaagccgat gccgagagcg gcggcgactt
     1741 ggccttgaac tcggccttgt tggccgggtt cggattcttc aaatgcaatt ttgcggatgg
     1801 agagcgcgaa catcgcttca gtgatgccga gaagggtaaa cgcgccgaga aataccaccg
     1861 gcgaatcgat gaagaaatgg gccaaggcgg cgatgacgat ggagacagcc gaggcggcga
     1921 cgatcaaaac tccggagctg aaatagctcg ccagcacccc agatgtcaga tcggagcaga
     1981 cccggccgac gccgttgacg accagcggca cgctcgccgc ggcgatcgag tagccgtggt
     2041 ctttcatgaa aaacggcgcc agcatggccg cgccggagga gccggcgatc tggacgatgg
     2101 cggccagg
//
LOCUS       DATIRS010000471         1713 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_35521, whole genome shotgun sequence.
ACCESSION   DATIRS010000471 DATIRS010000000
VERSION     DATIRS010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1713
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35521"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..193)
                     /locus_tag="VLM90_05965"
     CDS             complement(<1..193)
                     /locus_tag="VLM90_05965"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HSQ12540.1"
                     /translation="MRSTAATSPALFGIERGRLLILAAAILWSLAGVFIKFLDIHALA
                     IVFYRSLFAALVFMPFLKRR"
     gene            complement(356..802)
                     /gene="rplI"
                     /locus_tag="VLM90_05970"
     CDS             complement(356..802)
                     /gene="rplI"
                     /locus_tag="VLM90_05970"
                     /inference="COORDINATES: protein motif:HMM:TIGR00158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HSQ12541.1"
                     /translation="MEVILKEDIANVGKIGEVVRVRDGYARNFLLPRGLVLEANKKNL
                     KTFEHSKKIIADQKTKVLRQAQAVGDQLAGVSLIIPMKVGEEGKLFGSVTNMQIEKAL
                     KAKGLVVDRRKIHLNETIKVVGDYDVPVRLSADLTVTLKVSVVADS"
     gene            complement(813..>1713)
                     /locus_tag="VLM90_05975"
     CDS             complement(813..>1713)
                     /locus_tag="VLM90_05975"
                     /inference="COORDINATES: protein motif:HMM:NF021506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2232 domain-containing protein"
                     /protein_id="HSQ12542.1"
                     /translation="FLFMSGISLPPIGALLLPFVAQPVLLFGVKYGIGHGLGVVLVAL
                     LLLAIFGGTELSLLYGVFAILAGALLALVGRLRRVEYLVVAAAAAMFAWALAVARYFF
                     GSWAALAGDFRAGVSQQFAAATRMQEQLGFSKESLELVKERMPQLIDMTLQLLPGLLF
                     LTFAIVALINLLSLRRRFPERGSAWFAIENFRNWKAPEPLVWGLIASGFSLFFPLADL
                     ARLIAMNLLLIVGAFYFAQGLAVIAFFFHKNNVPRFLRGITYILIVFQQIFTLMVVGL
                     GLFDLWGDFRRLGKDNLTSSQAS"
BASE COUNT          439 a          512 c          445 g          317 t
ORIGIN      
        1 cacgccgctt caaaaacggc atgaatacca gcgcagcgaa caaactgcgg taaaatacga
       61 tagctagcgc atggatatcg aggaatttaa taaacacgcc ggcgagactc cagagaatgg
      121 cggccgccag gataagtagc cggccgcgct cgatgccaaa tagcgcaggc gaggtggctg
      181 ctgtggatct cattggtaat acttcgtctg cgcaggcttc acccggcgag gttaccgcaa
      241 ttcgattgcc accggcgcac cagggaaccg ccacaaataa aaatgggatg ggacactgat
      301 gcgcccaccc catggtgatc ggaccgatga ttggactcta tgaatacgcc tagctttagc
      361 tgtccgccac caccgacact ttgagcgtta ccgtcagatc cgccgacaac ctgaccggca
      421 cgtcgtagtc gccgacgacc tttatcgttt cgttcaaatg aatcttgcgc cggtcgacga
      481 cgagtccttt ggccttgagc gccttttcga tctgcatgtt agtcaccgaa ccgaacagct
      541 tgccttcttc gccaaccttc atcggaatga tcaatgacac gccggccaat tgatcgccca
      601 cggcttgagc ttggcgcagc accttggttt tctgatcggc gatgattttt tttgaatgct
      661 cgaaggtctt caaatttttc ttgttggcct ccagcaccag cccgcgcggc agtaagaaat
      721 tccgcgcata accgtcgcgc acgcgcacga cttcgccgat cttgccgaca ttggcgatat
      781 cttctttgag aataacttcc atggttcctc cactaggacg cttggctcga agtcaggttg
      841 tctttaccca agcggcgaaa atcgccccat aggtcgaaca gccccaaccc aacaaccatc
      901 agcgtaaaga tttgttgaaa cacgatcaag atataggtaa tgccgcgcag gaaccgcggt
      961 acgttgtttt tgtgaaaaaa aaacgcgatc accgccaacc cctgggcaaa gtaaaaagca
     1021 ccgacgatca acaacagatt catggcgatc agacgcgcga ggtcggcaag cgggaaaaac
     1081 aagctaaagc cgctcgcgat cagcccccag accagcggtt ccggcgcttt ccagttgcgg
     1141 aaattttcga tcgcgaacca tgcgcttccg cgctcgggga aacggcgccg cagcgaaaga
     1201 agattgatca aggcgacaat cgcaaaggtc aaaaacagca aacccgggag gagctgtaaa
     1261 gtcatatcga tcagctgtgg cattctttct tttaccagtt ccaagctttc cttggagaac
     1321 ccgagctgtt cctgcatgcg cgtcgctgcc gcgaactgtt gggacacacc agcgcggaag
     1381 tctcccgcca gcgccgccca agagccgaaa aagtagcggg ccacagcgag cgcccaggca
     1441 aacatcgccg cggccgcggc gacaacaaga tactcaaccc tgcgcagccg gccgaccagc
     1501 gccaacagcg ctcccgccag gatggcgaat acgccgtaca gcaagctaag ttcggtgccg
     1561 ccaaagatcg ccaacagcaa gagcgcgacg agtaccacgc cgaggccatg gccaataccg
     1621 tatttgacgc caaacaacag caccggttgg gcgacaaacg gcagcagtag cgcgccgatg
     1681 ggcggcaaac tgatgccgct catgaacaaa aac
//
LOCUS       DATIRS010000472         1816 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1708008, whole genome shotgun sequence.
ACCESSION   DATIRS010000472 DATIRS010000000
VERSION     DATIRS010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1708008"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..531)
                     /locus_tag="VLM90_05980"
     CDS             complement(<1..531)
                     /locus_tag="VLM90_05980"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HSQ12543.1"
                     /translation="MSDFVLFEQIGHVAIVTINRPDRMNALGHEVRTGLVDAFLKIRH
                     EPSIKVAVITGAGDKAFSAGADLKEHNEIFQEKSYRVGPDYGALDEPPHSSQLAIETY
                     KPLIAAVNGYALAGGCELTLACDIRIASENARFGLPEAKRGRGANFATVMLQYLIPRG
                     IAMEMLFTGEQISAQDA"
     gene            complement(715..1701)
                     /locus_tag="VLM90_05985"
     CDS             complement(715..1701)
                     /locus_tag="VLM90_05985"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12544.1"
                     /translation="MTVRRRVTFMLFCAVWAFDIGLAQERPKIYLGASSKTLGYSPLW
                     VAAKKGFFEQQGLDVQLVLLRGVPMTVQALAANSLHFGSGGPEPYIEAAERGLDFIVI
                     GGIINGIAQFLVAGKNYKSYEDLRGATLGTSSLTGGIVTALREALKLKGLEYPRDYKL
                     LIIAGGSSANLAALQAGQIAATTMAAPLNYAAQEAGFNILGKLSDGIPHFQTNAFIAR
                     RGWAEKNRPTMVRFMKAHVQAMRWLFENKDAAVEFLSQEMKLKPLHARLGWEFYTQNR
                     HWPPDGDVTMEGMKNNIRIYAELTGLKGPLPDPVKYVDRSYLVDALKELERR"
BASE COUNT          389 a          539 c          507 g          381 t
ORIGIN      
        1 cgcgtcttga gcggaaatct gttcgccggt aaaaagcatt tccatggcga tgccgcgggg
       61 aatcagatac tgcagcatca ccgtggcgaa gttggcgccg cggccgcgct tggcttcggg
      121 taagccgaag cgggcatttt ccgaggcgat gcgaatatcg caggcgagtg tcagctcgca
      181 gccgccggcc agcgcataac cgttcaccgc ggcgatcagc ggcttatagg tttcgatggc
      241 caactggctc gaatgaggcg gctcatccaa cgcgccgtag tcagggccga cgcgatatga
      301 tttctcctga aaaatttcgt tatgttcttt cagatcggcg cccgccgaga acgccttgtc
      361 gccggcgccg gtgatgaccg cgactttgat cgatggttca tggcgaattt tgagaaacgc
      421 atcgaccagc cccgtgcgca cttcatggcc taaagcattc atccgatccg gccggttgat
      481 cgtgacaatc gcgacatgac ctatttgctc gaataacaca aaatcagaca tcgaattacc
      541 tcggtaaagc tattcttggc gcagcgccag agctaacacc cgctggacgg aagttcaaca
      601 aatccgccgc cgcagtggag ctagcgcaat gacgcggcgc acgctgttcg acatgacaag
      661 cgctggcaac cggtcatctt gagcgcagcg ataaatctct cttagtgtga attgctaacg
      721 ccgttcgagt tccttaagcg cgtctactag ataactgcgg tcgacatact tgacggggtc
      781 cggcagcggc ccttttagac ccgttagctc ggcataaatg cgaatgttgt tcttcatccc
      841 ttccatggta acgtcgccat ccggcggcca gtggcgattc tgcgtataga actcccaacc
      901 gagccgggca tggagcggct ttagtttcat ctcttgggac agaaactcca cggcggcgtc
      961 cttgttctcg aatagccagc gcatcgcctg cacatgggct ttcatgaagc gcaccatcgt
     1021 cggacgattc ttttccgccc aaccgcggcg cgcgataaac gcattggtct gaaaatgcgg
     1081 gattccgtcg cttagcttgc cgaggatatt gaagccggcc tcctgggcgg cgtagttaag
     1141 cggcgccgcc atcgtcgtcg cggcgatctg ccccgcctgc aacgcggcga gattggccga
     1201 tgaaccgccg gcgatgatca atagtttgta atcgcgcgga tactccaagc ccttcaattt
     1261 gagcgcttcg cgcagcgccg tgacgatgcc gccggtcagc gatgacgtgc ccaaggtcgc
     1321 accgcgcaga tcttcgtagc tcttataatt cttgcccgct accaagaact gggcgatgcc
     1381 gttgatgatg ccgccgatga cgatgaagtc gagaccgcgc tccgcggcct cgatataagg
     1441 ctccggaccg ccggagccga aatgcagcga gttggccgcc aacgcctgta ccgtcattgg
     1501 cacgccgcgc aggagcacga gctgcacatc caaaccttgc tgctcgaaga atcctttttt
     1561 cgccgccacc caaagcgggc tgtagcctag agtcttgctc gaagcgccga ggtaaatctt
     1621 cggccgctcc tgcgccaacc caatgtcaaa agcccaaacg gcgcaaaaga gcatgaatgt
     1681 aacgcggcgt cgaacggtca tgtttcctcc cagccagacg atcgcggttt caaggtatcg
     1741 cttgaccgag ctttacaacg acgctgattg agctttcaag acatgaccga ggaattcatg
     1801 ggcttaccga aattgc
//
LOCUS       DATIRS010000473         1739 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_232699, whole genome shotgun sequence.
ACCESSION   DATIRS010000473 DATIRS010000000
VERSION     DATIRS010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_232699"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(218..>1739)
                     /locus_tag="VLM90_05990"
     CDS             complement(218..>1739)
                     /locus_tag="VLM90_05990"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSQ12545.1"
                     /translation="HTDSLGFYAAEVLQRTAARQPDKTAIIAKEEELTFAALNQRVQA
                     LAGHLIADGIRQGDRVGVLLPNSTAIPLAYYSTQKIGAVTVILDARLKGKELEGVLQD
                     ADLKLLVVHQTLYSEVEEIFKTIAPIPVWIACGTGERGFEHRFTATAGATYLPELKPD
                     DDALILYTSGTTGEPKGVVLSYRNLLQYPKVMGAMNVCDATTMRGCVLPMSHIVGPVV
                     CNELAEKGYTLVIFDQINPVTLLEGIQKYRVNVFESVPIVFQLLLGVKNLASYDTSSM
                     KIAAMMGTSIPMPLLRAFQTAQPHIKVIQGYGLTETSPMITLVEPEKAEAKMGSIGRA
                     VPGVEVKIVDDNDKEVPVGEAGEIITRGPHIMKGYFRRADATAQRIRNGWLYTGDVGK
                     VEADGYYYHLGRRDDMIITGGLNVYPAEVENLIYTYPGVQETLVFAIPDAKRGQVIGA
                     AIVQRPGATVVEKELLSFLRANLANFKVPDQIVIRESLPRTSSGKTIRDAATLLGN"
BASE COUNT          361 a          508 c          488 g          382 t
ORIGIN      
        1 gtccgttcaa gcgccggaat ttcggcaggc gctgccggcc aggttgtcat tcgaaagaac
       61 tcaccgtgga gtatggagaa tgcagattcg gaaattcctc ccgcgaaggc gcaaagtgac
      121 aggcaaggcc tgtcatgccg agccaaagac tcatctttct tactttcgcg ccttagcgat
      181 aagtattccg atctcttttt tgcgcggtta aaaccaatca attccccagc agcgtcgcag
      241 catcgcggat cgtcttgccc gacgaggtgc gcggcagcga ctcgcggata acgatctggt
      301 cgggcacttt aaaattcgcc aggttggcgc gcagaaaact cagcagctct ttttcgacca
      361 ccgtcgcgcc cggccgctgt acaatcgcgg cgccgatcac ttggccgcgc ttggcatcgg
      421 ggatggcgaa gacaagggtc tcctgcacgc caggataggt gtaaatcaaa ttctccactt
      481 cggcgggata gacgttcaag ccgccggtga tgatcatgtc gtcgcgccgg ccgagatgat
      541 agtagtagcc atccgcttcc accttgccga catcaccggt atagagccag ccgttgcgga
      601 tacgttgtgc cgtagcatcg gcccggcgaa aataaccttt catgatatgg gggccgcggg
      661 tgatgatttc tcccgcttcg ccgaccggca cttccttgtc gttgtcatcg acgatcttca
      721 cttccacgcc cggtacggcg cggccgatgc tgcccatctt ggcttccgct ttttccggct
      781 cgaccagcgt gatcatcggc gacgtttccg tcagaccgta accttgaatg actttgatat
      841 gcggttgggc ggtttggaac gcgcgtaaca gcggcatcgg aatgctcgtg cccatcatcg
      901 cggcaatctt catgctgctg gtgtcgtagc tagccaagtt tttcacaccg agcaaaagct
      961 gaaacacgat gggcacgctt tcgaaaacat tgacgcggta tttttgaatg ccttcgagca
     1021 aagtaaccgg attgatctga tcgaagatca ccagcgtgta gcccttttcc gctaactcgt
     1081 tacacaccac cggaccgacg atatgcgaca tcggcagtac gcagccacgc atcgtcgtgg
     1141 catcgcagac gttcatcgcg cccatcacct tgggatactg cagcagattg cgataggaca
     1201 gcaccacgcc tttgggctcg ccggtggtgc cggaggtata aagaatcaaa gcatcgtcgt
     1261 caggcttgag ctctggcagg tacgtcgcgc cagccgtagc ggtgaaacga tgctcgaaac
     1321 cgcgctcgcc cgtgccacag gcgatccaaa ccgggatcgg cgcgatagtt ttaaaaatct
     1381 cttcgacttc cgaataaaga gtttggtgca ccaccaacag tttcaaatcg gcgtcctgca
     1441 acacgccttc tagctctttg cccttcaagc gggcgtcgag gatcacggtc acggcgccga
     1501 tcttctgcgt tgaataataa gcgagcggta tcgccgtgga gttgggcaag agcacaccga
     1561 cccgatcgcc ttggcggatg ccgtccgcga tcaagtggcc ggccagcgcc tgtacccgct
     1621 gattgagcgc ggcgaaagtc agctcctctt ccttggcgat gatcgcggtc ttgtcgggtt
     1681 ggcgcgccgc cgtccgctgt agaacttcgg cggcgtaaaa acctagtgaa tcggtatgg
//
LOCUS       DATIRS010000474         2277 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1019626, whole genome shotgun sequence.
ACCESSION   DATIRS010000474 DATIRS010000000
VERSION     DATIRS010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2277
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1019626"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(36..224)
                     /locus_tag="VLM90_05995"
     CDS             complement(36..224)
                     /locus_tag="VLM90_05995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12546.1"
                     /translation="MAVIHGIPTAAQAKKIALGLAIAADREEWEGMSEWYCNACGCDW
                     SRHSRRFKKPGGVNATRG"
     gene            complement(342..1355)
                     /locus_tag="VLM90_06000"
     CDS             complement(342..1355)
                     /locus_tag="VLM90_06000"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12547.1"
                     /translation="MQLPPIAATTIGSFPRPSWLAQNERSRAVFRLEGAELKQAQDDA
                     TALSIHNQERIGLDLLSDGEQRRTGFINHVLASFDGIDLEHEAVKTIYRRREQPRPVP
                     RIVGKIKRRKQAIVEDLKFARAQTNKPIKMDVPGPMTVVDSTLDEFYKGDEAAMAMDV
                     AAAINEELRDLQAAGCDVLEIDEPAMTRYHEKVFAYGAKALDRCLEGITVPTVVHLCY
                     GYPGGGGRQHEYEYPELLEELMKTKIGGFGVEFARSGYDPSVLAIAKGRIVMFGCVDP
                     SDTPVPSVKQVAERVRTVLKYVEPKNLWLAPDCGLMTITRELADAKAKLLVDVANEVR
                     KTI"
     gene            complement(1571..>2277)
                     /locus_tag="VLM90_06005"
     CDS             complement(1571..>2277)
                     /locus_tag="VLM90_06005"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HSQ12548.1"
                     /translation="RGSLLPGGLVILHEDRDLIVVDKPAGLLTISTDREKSRTAYFIL
                     TDYARKGIAKSRNRIFIVHRLDRETSGILIFAKNEEAKYRLQNQWQGTKKQYLAVVHG
                     SCDKHAETITTYLTENQAHGVYTTTDTRKGKLSHTAYRVLKETRDFSLLEVNLLTGRK
                     HQIRVHLAGIGHPVVGDERYGKEHKRYQRLALHARSISFKHPFSGESMTFETKVPVFF
                     TTLVGHWEPANRTPAA"
BASE COUNT          422 a          612 c          687 g          556 t
ORIGIN      
        1 tggattagcg cgtcgctttt gcccgttcga cacagtcatc cccgtgtcgc gttgacgccg
       61 ccgggtttct tgaacctccg cgagtggcgg ctccagtcgc agccgcaggc attgcaatac
      121 cattcgctca tgccttccca ttcttcgcgg tcggcggcga tggccaggcc aagggcgatt
      181 tttttcgctt gggcggcggt tggaatgcca tgaatcaccg ccattacggc tgatgagccg
      241 cactcgggac aaggtggtgc tggcttagcg agttttgctc tgcttggctg agttgccatg
      301 gtcgtgcagc aaactcaatt agtgctctat attttagaaa gttatatagt ttttctaact
      361 tcattagcca catcaactaa aagtttcgct ttggcgtccg ccagctcgcg ggtgatcgtc
      421 atcaggccgc agtcgggggc gagccagaga ttttttggct cgacgtattt gagaacggtg
      481 cgtacgcgct cggccacctg cttgaccgaa ggtaccggcg tgtcgctcgg atcgacgcag
      541 ccgaacatga cgatgcggcc cttggcgatt gccagcaccg atgggtcgta gccgctgcgg
      601 gcgaattcga cgccgaagcc gccgatcttt gttttcatca gttcttcgag cagttcggga
      661 tattcatatt catgctgccg gccgccgccg cctggatagc cgtagcagag atggaccact
      721 gtcggcacgg tgatgccttc gagacagcgg tcgagcgcct tggcgccgta ggcgaagact
      781 ttctcgtgat agcgggtcat cgccggctcg tcgatttcca ggacgtcgca accggcggcc
      841 tgcaggtcgc gcagctcttc gttgatcgcc gcggcgacgt ccatggccat ggcggcttcg
      901 tcacctttgt aaaactcgtc gagcgtgctg tcgaccacgg tcatcggccc gggcacgtcc
      961 atcttgatcg gtttgttggt ctgcgccctg gcgaatttga gatcttcgac gatcgcctgc
     1021 ttgcggcgtt tgatcttgcc gacgatgcgc ggcaccgggc gcggctgttc gcgccggcga
     1081 tagatcgttt tcaccgcttc atgttcaagg tcgatgccgt caaaggacgc gagcacatga
     1141 ttgataaacc cggtgcgccg ctgctcgccg tcggacagca gatcgaggcc gatgcgctct
     1201 tgattgtgaa tgctcagcgc cgtggcatcg tcctgcgcct gtttcagttc cgctccctca
     1261 agacgaaaca ccgcgcggct gcgctcgttc tgcgccagcc aactgggtcg gggaaaactg
     1321 ccaatagtgg tggcggcgat gggtggaagt tgcatgattc acctcgttgg gagatttgtc
     1381 tctggctata tacgcgctgc tgatgaaaca caaggttgaa atgatggagt agtgggtggg
     1441 tcggatggga ttcagtcgag gatggatgat ggaggatcga ggatggtaac cgtggtgaaa
     1501 tccagcgatt gtgaaatctg agaatcccta atccaaaatc gaaaatccaa aatccaaaat
     1561 cgcgggtagg ttaggcggcc ggggttcggt tcgccggctc ccaatggcct acgagcgtgg
     1621 tgaagaatac cggcactttc gtttcaaatg tcatcgactc accactgaag gggtgcttga
     1681 aggaaatcga tcgggcgtgc agcgccagac gttggtagcg tttatgttct ttcccgtatc
     1741 gttcgtcgcc gaccaccggg tggccaatgc cggcgaggtg gacgcggatc tggtgcttgc
     1801 ggccggtcaa aagattaact tccagtaaac taaagtctct ggtctctttg agcactctgt
     1861 atgctgtatg cgaaagcttg cccttgcgcg tatccgtggt cgtgtagacg ccgtgcgctt
     1921 gattttcggt tagatacgtc gtgatggtct cggcgtgctt gtcacagctg ccgtggacga
     1981 cggcgaggta ttgcttcttg gtgccttgcc actggttttg caaacgatac ttcgcttctt
     2041 cgtttttggc gaaaatcagt atccccgaag tctcccgatc gagccggtgc acgatgaaaa
     2101 tacgattccg agatttcgcg atacctttgc gagcgtaatc ggtgagtatg aaataggccg
     2161 tgcgcgactt ttctcgatct gtgctgatgg ttaacaagcc cgccggttta tcgacgacga
     2221 tgaggtctcg atcttcgtgc aggatcacca agccacccgg cagcaagctg ccgcgcc
//
LOCUS       DATIRS010000475         1879 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_429728, whole genome shotgun sequence.
ACCESSION   DATIRS010000475 DATIRS010000000
VERSION     DATIRS010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1879)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1879)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1879
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_429728"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..766
                     /locus_tag="VLM90_06010"
     CDS             <1..766
                     /locus_tag="VLM90_06010"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016208 - AMP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSQ12549.1"
                     /translation="FDAGAPFSTSAGAMSYLKSVATECFSQSVQVNQVIERGKAAEAI
                     VERAKQDPGCLIAMGTHGRSGIDRWLLGSVAAKVIQAAENPLLLVRARSEAEAKSIVR
                     FDSIIIPLDGSELAETVLPAVLDLARSLNTEVVLARAFQLPATAYYRADDTSGTEAFI
                     PSYEELVAAMSREARDYLDAKVKEIRAHQPVRLRAEILEGPAAEQVIDLARNTTGSLI
                     AMCTHGRSGLRRWVLGSVTEKVVRHAENPILIIRAR"
     gene            789..1655
                     /locus_tag="VLM90_06015"
     CDS             789..1655
                     /locus_tag="VLM90_06015"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSQ12550.1"
                     /translation="MYKKILVPLDGSKLAERVLPFARRLADSFGAAVELLRVSDPDAR
                     PPFSPPQASAQYLKEVSEKYFPASAQVAEVAEVGEPAQVIIDRAKADPACLIAMATHG
                     MSGMRRWLLGSVVAKVVHTAANPLLLVRPADGDPSMPVVLNTIFVPLDGSALAEKALP
                     HVIALGKTMNLEVHLMRVYTLPPDAYVVADGVIAQGPAAFRDSIKNEATTYLEGKIDE
                     LRASGLERLVATAIEGDAASEIIDIARKTPNNLIAMSTHGRSGVGRWLLGSVAEKVIQ
                     HSQDPVLVIRAA"
BASE COUNT          380 a          535 c          585 g          379 t
ORIGIN      
        1 cttcgatgcc ggagcgccat tttcaacttc ggcgggggcg atgagttatt tgaaaagtgt
       61 tgccacggaa tgtttttccc agtccgtgca ggtcaatcaa gtgatcgagc gcggcaaagc
      121 ggcggaagcg atcgtcgaac gggccaagca agaccccggc tgtctgatcg ccatgggcac
      181 ccacggccgc tctggtatcg atcgctggct tttgggcagc gtggcggcca aagtgattca
      241 ggctgcggag aatccgttat tgctcgtgcg cgccagaagt gaagctgaag cgaagtcaat
      301 tgtaagattt gattccatta tcattccgct ggacggctct gagctggccg agacggtgct
      361 accggccgtt ctcgatctcg cgaggtcttt gaatacggag gtcgtgcttg ccagggcctt
      421 ccaactgccg gccacggcct attaccgagc cgacgatact tcgggaaccg aggcatttat
      481 cccaagctac gaagagctgg tcgcggcgat gagccgggaa gcgcgtgatt atcttgacgc
      541 gaaggtaaaa gagatacgcg ctcaccaacc ggtacggctt cgcgcggaga tcctcgaagg
      601 accggcagcg gagcaggtta ttgacttggc gcgcaacacg acaggcagct tgatcgcgat
      661 gtgcacgcac ggccgctcgg gcctcaggcg ctgggtgctt ggcagtgtca ccgagaaggt
      721 cgtgcgccat gcggagaacc cgattttgat tatacgcgcg cgctgacccc cgcgtcagga
      781 gctaagatat gtacaagaaa attctcgtgc cgttggatgg gtcgaaactg gcggaacggg
      841 ttttgccgtt tgcgcgccgg cttgccgatt cgttcggagc tgcggtggag ttgctgcggg
      901 tgagcgatcc ggacgcccga ccacctttct ccccgccgca ggccagcgct caatacctga
      961 aagaggtgtc ggaaaaatac ttcccagcat cagcccaagt ggctgaggtc gccgaagtcg
     1021 gcgagcccgc gcaggtcatt atcgatcgcg ccaaagccga tcccgcctgt ctcattgcca
     1081 tggcgaccca cggcatgtcc ggcatgcgcc gttggttgtt gggcagcgtc gtggcgaaag
     1141 tcgtgcacac ggcggctaat ccgctgttgc tcgttcgtcc cgccgatggc gatccatcga
     1201 tgccggtggt gctcaacacc attttcgtgc cgctggacgg atcggcgctc gcggaaaaag
     1261 ctttgcccca tgttatcgcg ctcggcaaaa ccatgaattt ggaagtgcat ctgatgcggg
     1321 tttacacgct gccgcccgac gcttatgtcg tcgcggatgg cgtgattgcc caggggccgg
     1381 ccgcgttcag ggactcgatc aaaaatgagg cgacaaccta tctcgagggc aagattgacg
     1441 agctacgggc atcggggctc gaacgtctgg tcgccaccgc catcgaaggc gatgccgcca
     1501 gcgagatcat cgacatcgcg cgcaagacgc caaacaattt gatcgccatg tcgacccatg
     1561 gcagatcggg cgtgggacgc tggctgctcg gcagtgtcgc ggaaaaagtc atccagcact
     1621 cgcaagatcc ggtgctggtg atccgggcgg cttaaagccc gcgcgcactc ttagctagtt
     1681 tggctgggtt tacctacggg ttttggcgct gcactccaat gcgccccgca cggtgcgtcc
     1741 acgcgaggcg gtgtgatatg caactgacaa cggtcaagat cgacaagccc gacgacatta
     1801 acttcattat cggccaaagc cacttcatca agactgtgga agatatccat gaagctctgg
     1861 tgcaagcgat tcccgggat
//
LOCUS       DATIRS010000476         1636 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1806259, whole genome shotgun sequence.
ACCESSION   DATIRS010000476 DATIRS010000000
VERSION     DATIRS010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1636
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1806259"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..506)
                     /locus_tag="VLM90_06020"
     CDS             complement(<1..506)
                     /locus_tag="VLM90_06020"
                     /inference="COORDINATES: protein motif:HMM:NF013298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12551.1"
                     /translation="MPAKIYIDGQAGTTALRIRDWLTGRNDLEVITLPEALRKDPAAR
                     KKALQDATIVLLCLPDDAAKEAAAWLADSPVRILDASTAHRVSDHWVYGLPELTASQR
                     ERIAKAKLVANPGCYASAVILLTRPLIDVDLIAADTPLAIHALSGYSGGGRALIERWE
                     DPKKKLINL"
     gene            623..>1636
                     /locus_tag="VLM90_06025"
     CDS             623..>1636
                     /locus_tag="VLM90_06025"
                     /inference="COORDINATES: protein motif:HMM:NF024739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12552.1"
                     /translation="MTYLARSSVAYVAFVVLLCAWYSDGRAAERSNEQIYATLAKLSA
                     DQREKRIEEGARKEGKLNFVHTWRGKNARDHVKLFEKRYPFVKVDMGDLGSQDAAERF
                     IAEESAGRHLTDILTLGVPDMAIILKHNFVAKFPTPATKKILKQYQNFIDPAERWIPW
                     YWAEHGISYNTNLIKPDKAPKTWFDLCKPEFKGQVSFDPSETRFLAGLHVMMGEEKTK
                     EWLKCMGQNQIIIQTGHTQRMELMLTGDHALQGDNYFYTGVEAKRKDPKAPFAMVLTA
                     PILSFAGGMIINKNALSPHASALFVDWKLSTDSQNMINGLLRGPLTIKHPYLPDNVKL
                     VTYN"
BASE COUNT          369 a          466 c          459 g          342 t
ORIGIN      
        1 agattgatta atttcttctt aggatcttcc cagcgctcga tcaaggcgcg gccgccgcct
       61 gagtaacctg acagcgcgtg gatcgccagt ggcgtgtcgg cggcgatcaa atccacatcg
      121 atgagcggcc gagttagcaa gatgacggcg gatgcatagc agcccggatt cgccaccagc
      181 ttcgccttgg cgatccgctc ccgctggctg gcggtcaatt ctggcaaacc ataaacccag
      241 tggtcactga cccggtgcgc cgtgctggcg tcgagtatgc gcaccggcga gtcggcgagc
      301 caagccgcgg cttccttcgc tgcgtcgtcg ggaaggcaaa ggagcacgat ggtcgcgtct
      361 tgcagcgcct tttttcgcgc cgcagggtct ttgcgcagag cttcagggag tgtgatgact
      421 tcgagatcgt tgcgacctgt gagccagtcg cgaatgcgca gcgcagtggt tcccgcctga
      481 ccatcgatat agattttggc tggcatttaa gagtccttct aagctagagc atgaatctta
      541 gcagaatttt attaacttga aatggcgcgg gcaactggca tatacgaatc ctaacctatg
      601 tgaaaatacg gaggagcgct cgatgactta tctggctcgc agctcggttg cctatgtcgc
      661 tttcgtagta ttgttgtgcg cttggtattc tgacggccgc gccgcggagc gctccaacga
      721 gcagatctat gccaccctgg cgaaactttc cgccgaccag cgggaaaaac gcatcgaaga
      781 aggcgcgcgc aaagagggca agctcaattt cgtccacact tggcgcggca agaacgcccg
      841 cgatcacgtc aagctattcg agaagcgcta tcccttcgtg aaagtcgaca tgggcgactt
      901 gggttcccag gacgccgccg agcgtttcat cgccgaggaa agcgccgggc gccatctgac
      961 cgatatcctg acgctcggcg ttcccgacat ggcgatcatc ctcaaacata atttcgtcgc
     1021 caagtttccc acgccggcaa ccaagaaaat tttaaagcag tatcaaaact tcatcgatcc
     1081 ggcggagcgc tggattccct ggtactgggc cgagcatggt atttcctaca acaccaattt
     1141 gatcaaaccg gacaaagcgc ccaagacttg gttcgatctg tgcaagccgg agtttaaagg
     1201 gcaagtatcc ttcgatccgt cggagacgcg gtttctcgcc gggctgcacg tcatgatggg
     1261 cgaggagaaa accaaagagt ggctcaagtg catggggcag aatcaaatca ttatccaaac
     1321 cggccacacc cagcgcatgg agctgatgct caccggcgac catgcgctac agggtgacaa
     1381 ttatttttac accggcgtcg aagccaagcg caaagatccc aaggcgccgt tcgcgatggt
     1441 gctgacggcg ccgatcctgt cgtttgccgg cggcatgatc atcaacaaga acgctctgag
     1501 cccccacgcg tcggcgctct ttgtcgactg gaagctgtcg acggatagtc aaaacatgat
     1561 caatggactt ttgcgcggtc cactcacgat caagcacccg tatctgcccg ataacgtcaa
     1621 gctggtgacc tataac
//
LOCUS       DATIRS010000477         1916 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_331348, whole genome shotgun sequence.
ACCESSION   DATIRS010000477 DATIRS010000000
VERSION     DATIRS010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1916)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1916)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1916
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_331348"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1916)
                     /locus_tag="VLM90_06030"
     CDS             complement(<1..>1916)
                     /locus_tag="VLM90_06030"
                     /inference="COORDINATES: protein motif:HMM:NF012403.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140658 - ATP-dependent chromatin
                     remodeler activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SNF2-related protein"
                     /protein_id="HSQ12553.1"
                     /translation="LCLTVERETDGARYRLAGSLRRGGEALDLSQPVLLLAGGLVFYD
                     GRIARLNDHGAFAWVAVLRAPSPLTFAVEDSEVFLDELVAIPNRPRLELPAELQFETV
                     AGAPQPRLLLKPGKQNNWSRERLTAELSFDYDGSVVPHQHRGGGFYQKEQRRLVTRDL
                     GAEDKARARLKQLGFRKGWEYERADLQLAPDQLSRVVRVLSAEGWQIHAQGSLYRTAG
                     ALTMQVNSSVDWFGVDGAAEFGDSRVGLPRLLRAIKQGEQTVRLDDGSLGIIPEEWMK
                     KYGMLAGLGTFEGDGMRFKRSQAGLLDALLASEPAVSFDAVFERVRQELRDFSGVAAV
                     APAGEFHGELRHYQLEGLGWLHFLQRFGFGGCLADDMGLGKTVQVLALLEARRELRRN
                     DPENSPPPALVVVPRSLIFHWKQESARFTPKLSILDHTGVARLKPGDHFDNYDVVLTT
                     YGTLRSDAVRFKDIRFDYCILDEAQAVKNASTLAAKAVRLLKADHRLAMSGTPVENHL
                     GELWSLFEFLNPGMLGTAAVFGRAGKNPDDNTRQVLGRALRPFILRRTKAQVAPELPE
                     KTEQTIYCDLEGNDRKLYDELRDYYRGRLLKNGTGENSGQYKIQVLEALLRLRQAACH
                     PGLIDKRKIAEPSA"
BASE COUNT          361 a          619 c          586 g          350 t
ORIGIN      
        1 ttggcgctgg gttcggcgat ttttctcttg tcgatcaggc ccggatggca ggccgcttgg
       61 cgcagccgca ggagcgcttc gagtacttgg attttgtact gccccgagtt ttcgccggtg
      121 ccgtttttca agagccgtcc ccggtagtag tcgcgcagct cgtcgtagag tttcctgtcg
      181 ttgccttcga gatcgcaata gatcgtctgc tcggttttct ccggcagctc gggggcgact
      241 tgcgctttgg tgcggcgcaa aatgaacggc cgcagcgccc tgcccagcac ttggcgggta
      301 ttgtcgtcgg gattcttgcc ggcgcggcca aacaccgcgg cagtgccaag catgccggga
      361 ttgagaaatt caaaaaggct ccacagctcg cccaggtgat tttccaccgg cgtgccgctc
      421 atcgccaaac ggtgatcggc cttgagcaag cgcaccgctt tggccgccag cgtgctggcg
      481 ttcttgaccg cttgcgcttc gtcgagaatg caataatcga agcgaatatc tttgaaccgc
      541 acggcgtcgc ttcgcaacgt gccgtaggtc gtcaaaacta cgtcgtagtt gtcaaaatga
      601 tcgccgggtt taagccgcgc gacgccggtg tggtcgagaa tgctcagctt gggcgtgaag
      661 cgcgccgact cctgtttcca atgaaatatc agcgagcgcg gcaccaccac caaggccggc
      721 ggcggcgagt tttccgggtc attgcggcgc agttcccggc gcgcttcgag gagcgcgagc
      781 acttgaactg ttttgcccaa gcccatgtcg tcggccaggc agccgccaaa accgaagcgc
      841 tggagaaagt gcagccagcc caaaccttcg agctgatagt ggcgcagttc gccgtgaaac
      901 tcgccggcgg gcgccaccgc cgcgacgccg gaaaaatcgc gcagctcttg gcgcacccgc
      961 tcgaacacgg cgtcgaagga aaccgccggt tcgctcgcca agagcgcatc gagcaggccg
     1021 gcttgggagc gcttgaagcg catgccgtcg ccttcgaaag taccgagacc ggcgagcatg
     1081 ccgtatttct tcatccactc ttcgggaatg atgccgagtg aaccgtcgtc cagccgcacc
     1141 gtctgctcgc cctgcttgat cgcccgcagc aagcgcggca agccgacccg gctatcgccg
     1201 aactcagcgg cgccgtcgac gccgaaccaa tcgacgctgg agttcacttg catggtgagc
     1261 gcgccggcgg tgcggtaaag gctaccctga gcatggattt gccaaccttc ggcggacaac
     1321 acccgcacca ctcgggaaag ctggtcgggc gcaagctgca ggtcggcgcg ctcgtattcc
     1381 cagcctttgc gaaagcccaa ttgcttgagc cgggcgcgcg ccttatcttc cgcgccaaga
     1441 tcgcgggtca ccaagcggcg ctgctccttc tgataaaagc cgccgccgcg atgctggtgc
     1501 ggcaccaccg agccgtcata gtcgaaggac agttccgcgg tgagccgctc gcggctccaa
     1561 ttattttgct taccgggttt taacaatagc cgcggctgcg gcgcgccggc gacggtttcg
     1621 aactgcaatt cggccggcaa ctccaagcgc ggccgattgg ggatcgctac cagctcgtcg
     1681 agaaagacct cgctgtcttc caccgcgaaa gtcagcggcg acggcgcgcg caggaccgcg
     1741 acccaggcaa aagcgccgtg atcgtttaag cgcgcgatgc ggccatcgta aaacaccaaa
     1801 ccgccggcga gcaacaagac cggctgcgac aaatccaacg cttccccgcc acggcgcagc
     1861 gaaccggcga gccgatagcg cgccccgtcg gtttcacgct ccaccgtcag acaaag
//
LOCUS       DATIRS010000478         2279 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_823045, whole genome shotgun sequence.
ACCESSION   DATIRS010000478 DATIRS010000000
VERSION     DATIRS010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2279
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_823045"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(235..771)
                     /locus_tag="VLM90_06035"
     CDS             complement(235..771)
                     /locus_tag="VLM90_06035"
                     /inference="COORDINATES: protein motif:HMM:NF014001.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2'-phosphotransferase"
                     /protein_id="HSQ12554.1"
                     /translation="MALALERLSRFLTFLLRHKPKDYPLALDGEGFAPWQDVVDLVRQ
                     RFYDVTEQQMRALIAGGSKQRFEIRGDQVRATYGHSFPVDLGGRLAEPPARLYFGAAR
                     DLAQSMLRRGLEPRDRQYVHLSITADEAESVARRHDPAPSVLVIDAQAANAEGVRFYE
                     SGPLFLVDNIPAKFLKLR"
     gene            complement(782..1660)
                     /locus_tag="VLM90_06040"
     CDS             complement(782..1660)
                     /locus_tag="VLM90_06040"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ12555.1"
                     /translation="MANLGFIGTGGMGSGMAANLIKAGNKLVITDLRREQCQGLEGQG
                     AVFKDSPKAVAESCDVVCSMLPYNQAVQAVGLGKGGLHEAVGGAKTWIDFSSIDKKTI
                     VGVEAELVKKGWTILDGSAGGVEEAAAAGTLSLWLSGSKAVFDKHQDIFKAMGNKVIF
                     VGELGNAKLVKNAMAMFAAVVHLSLAETCAWLKKGGLSEDTFRTILKNSQQDSVAIDR
                     IMEIIVSKKYKPRKSWMPKDVGFGLDMAREMEVPMPFVALAYQMFSIAQATGQDGYEA
                     TGIACNVYDIITGAKK"
     gene            complement(1694..2074)
                     /locus_tag="VLM90_06045"
     CDS             complement(1694..2074)
                     /locus_tag="VLM90_06045"
                     /inference="COORDINATES: protein motif:HMM:NF024375.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSQ12556.1"
                     /translation="MAENGTGVLRRSLNDFLAIQLDDTALARLSWRDFGNGLEMSRLA
                     RQGKRELVLYRIAADASPEAFVKHEHVGGEFYLVLKGKIGDETGEYESGDVVFLDPQS
                     VHTPRAIGETVVLVLWPAGVRLVD"
BASE COUNT          481 a          703 c          620 g          475 t
ORIGIN      
        1 accttcaatt tcaagacttc gagctccttg aagcgtatac cgcttcggcc gagcgaaaac
       61 cgagcatgcc gtggatgaac tgcggtttga gtttcggcac tgcagcgcga atcgcttggt
      121 gaatcgcgct tagtatcttc cggcgcggtg ccgccagact ggcaaggtac tcgctggggt
      181 ttttaaccta cggattagcg cgcatagctt ggcaaccatt cgaagggctt gcggctaacg
      241 caatttcaga aacttcgccg ggatattatc gaccaaaaac agtggcccgg actcgtagaa
      301 gcgcactcct tcggcgtttg cggcctgggc gtcgatgaca agaaccgacg gcgccggatc
      361 atggcgccgc gccaccgact cggcctcatc cgccgtgatg ctcagatgca catactggcg
      421 atcgcgcggt tcgagaccgc gccgcaacat cgattgtgct aggtcccgcg ccgcgccgaa
      481 gtaaagccgt gccggcggct cagccaacct gccgccgagg tcgactggaa acgaatggcc
      541 gtaggtcgcg cgaacctgat cgccgcgaat ttcgaaacgc tgcttcgacc caccggcgat
      601 cagcgcgcgc atctgctgct cggtgacatc gtaaaagcgc tgccgcacca aatcgacaac
      661 atcctgccac ggcgcgaaac cctcgccgtc gagcgccaag ggataatcct tgggtttgtg
      721 acgtaagagg aatgtcaaaa agcgcgacag tcgttccagt gccagcgcca cgttatcctc
      781 gctatttttt cgccccggtg atgatgtcgt aaacgttgca ggcgatgccg gtggcttcat
      841 agccgtcctg gccggtggcc tgggcgatgg aaaacatctg gtaggccagg gcgacgaacg
      901 gcatcggcac ctccatctcc cgcgccatgt cgaggccgaa gccgacatcc ttgggcatcc
      961 acgacttgcg cggtttgtac ttcttgctga cgatgatctc catgatccgg tcgatggcga
     1021 ccgaatcctg ttgggagttt ttcaggatcg tgcgaaacgt gtcttcgctg agaccgccct
     1081 ttttcagcca agcgcaggtc tcagccagac tcaagtgcac caccgcggcg aacatcgcca
     1141 tggcattttt caccagcttg gcgttgccca gttcgccgac gaaaataacc ttgttgccca
     1201 tcgccttgaa gatatcctgg tgcttgtcga acaccgcttt cgatcccgat agccaaagcg
     1261 acaaagtccc ggccgcagcc gcctcttcga ccccgcccgc tgaaccatcc agaattgtcc
     1321 agcccttttt cacaagctca gcttcgacgc caacgatggt ctttttgtcg atgctgctga
     1381 aatcgatcca tgttttcgcg ccgccgacgg cttcatgcag tccgcctttg cccaagccga
     1441 cggcttgcac ggcttgattg taaggcaaca tcgagcacac cacatcgcat gattccgcta
     1501 ccgctttggg cgagtctttg aataccgcgc cctggccttc caagccctgg cactgctcgc
     1561 ggcgcagatc ggtgatgact aacttattgc cggccttgat caagttggca gccatgccgc
     1621 tgcccatgcc gccggtgccg atgaatccta gatttgccat gttgcctccc gaaaaattta
     1681 ggtgaattga taatcagtct accagccgca cgcctgccgg ccatagaacc agcacgaccg
     1741 tctcgccaat cgcccgcggc gtatgcaccg actggggatc gagaaacact acgtcgccgg
     1801 attcgtactc gccggtctca tcgccgatct tacccttgag caccaggtaa aactcgccgc
     1861 ccacatgttc atgcttcaca aaagcttcgg gcgaagcatc ggccgcgatg cgatagagca
     1921 ccaactcgcg cttgccttgg cgcgccaagc gcgacatctc cagcccattg ccgaagtcgc
     1981 gccagctcaa tcgagccagt gccgtatcgt cgagctgaat cgcgagaaaa tcgttaagcg
     2041 agcggcgcaa tacgccagtg ccattttccg ccacggcgtt taactatcac gactcatcgg
     2101 tgaacaaaag atgggaaggc tggctcgacc agagacaacg ctgggatgct gaagttgcca
     2161 aagcgatcac gagggtgcgg tcacaatagc gccaggaatt gtttgattat tgagttcaat
     2221 caaatttgcc gtgcgcgctt gcgcctcaga actgggatgc aaagagagtc gggatgtct
//
LOCUS       DATIRS010000479         1819 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1511387, whole genome shotgun sequence.
ACCESSION   DATIRS010000479 DATIRS010000000
VERSION     DATIRS010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1819)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1819)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1819
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1511387"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..572)
                     /locus_tag="VLM90_06050"
     CDS             complement(<1..572)
                     /locus_tag="VLM90_06050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12557.1"
                     /translation="MIYSLLFLGIQQRGKEDLFDSRQFLRQAFGAGILEEHFKHFSVL
                     FHAEGKRVVTEGCRLLRSIVVFKVEIAGAAETAFFIGCQFALAKDSEELAGKPVMLIQ
                     QAALRDDDVIGRHDARLLEKRFDRLSPAVGKQFSQARIAFQGGAAVAIDVVDALQAFI
                     VARREAISGVDLTLVEHDVEGLRGSKPSQR"
     gene            571..1668
                     /locus_tag="VLM90_06055"
     CDS             571..1668
                     /locus_tag="VLM90_06055"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12558.1"
                     /translation="MARQFSTVDADGHLEENHIDWKERLPESYKSLAPDRRDSGNGQL
                     RTIIEGKAWPRPSGLGIGVGGPYSRPHPRRPGMTDPKARLVDMDSENIDVAVLFGAGL
                     AGTLPALDDAGLAAALATARNSWLAEYCAEDPKRIKGTAALAQQDIDASVVELRRSVT
                     ELGFVGSSVFPNVRGRHLGDSYFFPLYAEAEKLNVPICVHMFLGRYGSDATGTERVDK
                     FFYSHLFGHPFEQMIALSVIIGEGVLDRFPNLRFVFLESGCGWLPYWFERMDEHYEVL
                     GVQLPALKTEPSKLLRRGQLYFSCESDEKELVHVIDIIGDDWIVFASDYSHFDSRFPG
                     AAEPIVNHAKLGDSSKRKILNDNARRLYPLD"
BASE COUNT          390 a          555 c          497 g          377 t
ORIGIN      
        1 tttctttgac ttggcttact gccgcgcaaa ccttcgacgt catgctcgac caaagtcaga
       61 tcgacgccgc ttatggcttc gcgccgcgcc acgataaacg cctgcagagc atcgacaaca
      121 tcgatcgcta cggcggcacc cccctggaag gcaatccgcg cctgcgaaaa ttgttttccg
      181 acggcgggag aaagacggtc gaagcgtttt tcaagaagac gggcgtcgtg ccggccaatc
      241 acgtcatcgt cgcgcaacgc cgcctgctgg atcagcataa ctggcttgcc ggcgagctct
      301 tcagaatctt tcgcgagagc aaactggcag cctatgaaaa atgcagtttc ggcagccccg
      361 gctatctcta ctttgaaaac aacgatcgag cgcaacaggc ggcaaccttc ggtgacgacc
      421 cgtttccctt cggcgtgaaa cagaaccgaa aaatgcttga aatgctcttc cagaattccc
      481 gcgccgaagg cctgacgcag aaattggcga ctatcgaaga ggtcttcttt tccgcgctgt
      541 tggattccta aaaaaagcag ggagtaaatc atggcgaggc aattttccac cgtcgatgcc
      601 gacggccatc tcgaagaaaa tcatatcgac tggaaagaac gtttgccgga aagttacaaa
      661 agcctggcgc ccgatcgccg tgacagcggc aatgggcaat tgcgcacgat catcgaaggc
      721 aaagcctggc cacggcccag cggtctcggc atcggtgtcg gcggcccgta cagccggccc
      781 cacccgcgcc gtcccgggat gaccgatccg aaagcgcgcc tggtcgacat ggacagcgag
      841 aacatcgacg tcgccgtgct gtttggcgcc ggtctcgccg gaacgcttcc ggccctggac
      901 gacgccggcc tggccgccgc gctggcgacc gcgcgcaatt cctggctggc tgaatattgc
      961 gccgaagatc cgaaacgaat caaaggcacc gcggccctcg ctcagcagga catcgacgcc
     1021 agcgtcgtag agctccgtcg cagtgtcacc gagctgggat tcgtcggctc atcggttttc
     1081 cccaacgtgc gcggccgtca tctcggtgat tcttattttt ttccgcttta tgccgaagcc
     1141 gaaaagttaa acgtcccgat ctgtgttcat atgtttttgg gccgctacgg ctcggacgcc
     1201 accggcaccg agcgcgtgga caagtttttt tactcgcatc tcttcggcca ccctttcgag
     1261 caaatgatcg cgctgtcggt catcatcggt gaaggcgtgc tcgaccgttt tcccaatttg
     1321 cgctttgttt ttctggaatc cggctgcggc tggctgccct attggttcga aaggatggac
     1381 gagcactacg aagtgctcgg cgtgcaattg ccggcgctca agaccgaacc gagcaagctc
     1441 ttgcggcgcg gccaacttta tttttcctgc gagtcggacg aaaaagagct cgttcatgtc
     1501 atcgacatca tcggcgacga ctggattgtc ttcgcttccg actacagcca cttcgacagc
     1561 cgcttccccg gcgccgccga gccgatcgtc aatcacgcaa agctcggcga ttcgtcgaag
     1621 cgaaagattc taaacgacaa cgcccggcgg ctctatccgc tggattgaag gaaattgact
     1681 atgcagttag cgaaggctca acgacatatt tttggccgcg aacgaaccgc agctagactt
     1741 tatcctctcc cctcgcggga gagggcaagg gtgagggggc taatcaatta ccaggcaccc
     1801 tcacctcatt cctctcccg
//
LOCUS       DATIRS010000480         1921 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_626620, whole genome shotgun sequence.
ACCESSION   DATIRS010000480 DATIRS010000000
VERSION     DATIRS010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1921
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_626620"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..863)
                     /locus_tag="VLM90_06060"
     CDS             complement(<1..863)
                     /locus_tag="VLM90_06060"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12559.1"
                     /translation="MKHSSDRILTTHTGSLPLPPLVRQALAAKRRGEAYDQAAIDATL
                     TTAIGDVVRRQIEVGIDIVDDGELSKTAWNDYVVHRVSGLERKPRSRARSAEPWSVAQ
                     GIVRPRDTGLVRRDIEGAPRHYRTDIAEFHDLARAQSDAHDNGGMAYVCTGPIGWKDF
                     AAVETDIARLAAAVKTTQAHDVFMSALSPGCFVRFFRNEFYPNEETYLQAVADAMRLE
                     YQAIVDAGFVLQLDCPDLASGANTDYAGLSIKEFRKVIEQHVECLNYALKTIPSEQVR
                     MHVCWGNYEGP"
     gene            complement(863..>1921)
                     /locus_tag="VLM90_06065"
     CDS             complement(863..>1921)
                     /locus_tag="VLM90_06065"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12560.1"
                     /translation="RAAANLLINIPAGMLVDLIGKKALLMALALVATGVPYFLVGVSQ
                     NYFWIALFMAFVGVGNYLWHPAAISTLSERYPDKRGFAIAIHAMGPNVGESLAPLFVG
                     ILLLYLSWRNVLFINLIPGIVIAFVLWKFLFGKLESRAQAQKGLSAKEYFSGMKKLAQ
                     NPSILMLVLVAGMRSMTQQGLHTFIPIYLTNDLGLSSAVAGLYLSVIQTAGLVGTPIA
                     GSISDRSGRKRVLSAGLFSTSIALVVLAYFRLNWLFISGLAMLGFFLYAVRPVIWAWV
                     LDLSPKEVGGSTVSFFSGAQSLLSSVSPWLCGLIADRWGILSAFYFLAGTVFVANLIV
                     MAIREEGKEPAALVQEPA"
BASE COUNT          405 a          548 c          612 g          356 t
ORIGIN      
        1 tgcggccctt cgtagttgcc ccagcaaaca tgcatgcgca cttgctcgga tggaatcgtc
       61 ttgagcgcgt aattgaggca ttcgacatgt tgttcgatga ctttacgaaa ctccttgatg
      121 ctcaggccgg cgtagtcggt attggcaccg gatgcgaggt ccgggcagtc gagttgcaag
      181 acgaaaccgg catcgacgat ggcctggtac tctaggcgca tggcatcggc aacggcctgc
      241 agataggttt cttcgtttgg atagaattca tttctgaaaa agcgcacgaa acagccgggc
      301 gaaagggctg acataaagac gtcgtgggct tgggtcgtct tcactgccgc ggccagccga
      361 gcgatgtcgg tttccaccgc ggcaaaatcc ttccagccta tgggaccggt gcagacatag
      421 gccatgccgc cgttgtcatg agcgtcgctc tgggcgcgcg ccagatcgtg aaactcggcg
      481 atgtcagtgc gatagtgccg cggcgcgcct tcaatgtcgc gtctgaccag cccagtatcg
      541 cgcggccgga cgatgccttg ggcaacgctc caaggttcag cgctccgggc gcgcgagcgc
      601 ggttttcttt ccaggccgct gacccggtgc acgacataat cattccacgc agtcttgctg
      661 agctcgccgt cgtcgacgat gtcgatgccg acttcgattt gacgccggac cacgtcgccg
      721 atggcggttg tcagcgtggc gtcgatcgcg gcctgatcgt acgcctcgcc gcggcgcttg
      781 gctgcgaggg cttggcgcac cagcggcggc agcggcagac tgccggtgtg ggtggtgaga
      841 atacggtcgc tactgtgctt cattatgctg gctcttgcac gagcgccgcc ggctctttgc
      901 cttcttcacg gatcgccatg acaatgagat tggcgacgaa caccgtgccg gcgagaaaat
      961 agaaggcgct caagatgccc cagcggtcgg cgatgagtcc gcacaaccac ggcgataccg
     1021 agctcagcaa tgactgcgcg ccggagaaaa aactcacggt gctgccgccg acctccttgg
     1081 gactgaggtc gagcacccag gcccagatca ccggccgcac ggcgtagagg aaaaagccga
     1141 gcatcgccag gccgctgata aataaccaat tcaagcgaaa gtaggcgagc accacgagcg
     1201 cgatgctggt ggaaaatagg ccggcggaga ggacgcgctt tcggccgctg cgatcggaga
     1261 tgctgccggc gatgggggtg ccgaccaggc cggcggtttg gatgaccgag agatagagcc
     1321 cggccacggc gctcgaaagt ccaaggtcgt tagtcaggta gatcggaatg aacgtgtgca
     1381 acccttgctg ggtcatcgag cgcatgccgg cgaccaggac gagcatgaga atgctcgggt
     1441 tctgcgcgag ctttttcatg ccggaaaagt actcttttgc tgacaagcct ttttgcgcct
     1501 gggcgcggct ttcgagcttg ccaaagagaa acttccacag gacgaatgcg atgacgattc
     1561 ctggaatcaa attgatgaac agcacgttgc gccaggatag gtagagcaac aagatgccga
     1621 cgaacagcgg cgccaggctt tcaccgacgt tgggtcccat ggcgtggatc gcgatggcaa
     1681 agccgcgttt gtcgggatag cgctcggaca gcgtcgagat cgccgccgga tgccacagat
     1741 aattgccgac accgacaaac gccatgaaca aagcgatcca aaaatagttc tggctgacgc
     1801 cgacgagaaa gtagggcacg ccggtggcga ccagcgcgag cgccatcagc agcgccttct
     1861 tgccgatcaa gtcgacgagc atgccggccg gtatattgat caacagattg gccgcggcgc
     1921 g
//
LOCUS       DATIRS010000481         1884 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_35966, whole genome shotgun sequence.
ACCESSION   DATIRS010000481 DATIRS010000000
VERSION     DATIRS010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1884
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35966"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..349)
                     /locus_tag="VLM90_06070"
     CDS             complement(<1..349)
                     /locus_tag="VLM90_06070"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HSQ12561.1"
                     /translation="MDYQGKNIRRVEVLVIGAGPAGSVASALLRRQGRQVLVLEREQF
                     PRFSIGESLLPQSMEYLEQAGMLTAVQQAGFQLKNGAAFARGDQFTEFNFSDKYSAGW
                     STTYQVERARFDHL"
     gene            complement(355..>1884)
                     /locus_tag="VLM90_06075"
     CDS             complement(355..>1884)
                     /locus_tag="VLM90_06075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12562.1"
                     /translation="LFMLSIAVGCLGALSASWLLFDRLHLVSLVFGASLIGGAQDYGI
                     YFLCNRVGADAQVDSWQLLRRLLPALLLALITTVVGYMGLALTPFPGLRQIAVFSALG
                     LVFAWLTVVFWFPLLVRPDTLGKIRLADWYTGSMARWPLVGRDRRTLVAATLFAALAI
                     FGWSRLGISDDIRLLQNPPKNLLDDQIKVSQLLDLPTPAQFYIVRGATAEAVLQREET
                     LKQRLDGLIEKRLISGYHALSNWVPSARAQVARVQLIEQKVLNDSGPLAVLAARIGAD
                     DKWVAATRERLQASVLPLRLEDFLKTPTSEPWRYLWIGQVDGGYASIVAVKGLNKTGL
                     PILEDAAAGLDGVGWVDTVGAISTVLGRYRQYMGWVVALAYVAVYGLLYPRYRGATWR
                     VLAPTALGSIATLALLGIAGQSLQLFHVLALMLILGVGVDYGIFLQEHGVRRDPIAWL
                     AVVLSALSTLLSFGLLSLSKTPALQAFGVTMLIGTTVVWLIVPCFDQSQVEKAGAPRG
                     L"
BASE COUNT          445 a          601 c          521 g          317 t
ORIGIN      
        1 aaagatggtc gaagcgggcg cgctcaactt ggtaagtcgt gctccaaccc gctgagtatt
       61 tatcgctaaa attaaactcc gtgaactggt caccgcgcgc aaaggccgcg ccgtttttca
      121 gttgaaagcc cgcttgttgc acagcggtca gcattccggc ctgttcgagg tattccatgc
      181 tttgcggcag caagctttcg ccgatgctga agcgcggaaa ctgttcacgc tctagcacca
      241 gcacttgccg gccttgtcgg cgcagcaatg ccgacgccac cgatccggcg ggaccagcgc
      301 cgatcaccaa cacttcgacg cgacggatgt tttttccctg gtagtccata acgatcaaag
      361 ccctcgcggc gctcccgctt tttccacctg agattggtca aagcacggaa cgatcaacca
      421 taccacggtg gtgccgatca gcatggtcac tccgaatgcc tgcaacgccg gcgtcttgct
      481 tagactcaaa aggccaaagg aaagcaatgt gctcagagcg gagagaacca cggcaagcca
      541 cgcaatgggg tcgcgacgga caccatgctc ctggagaaaa atcccatagt cgacaccgac
      601 tccgagaatc agcatcagcg ccaacacgtg aaacaactgc aaactctgac cggcgatacc
      661 caagagcgcg agcgtggcga tacttcctag cgccgtcggc gccagcacgc gccaggtggc
      721 gccgcgatag cgcgggtata ataggccgta caccgcgacg taggcgaggg cgaccaccca
      781 acccatatat tgccgatagc ggccgagcac cgtcgagatc gcgcccaccg tatccaccca
      841 acctacgcca tcgagacccg ccgcggcatc ttccaagatc ggcaagcccg tcttgttcaa
      901 gcctttcact gcgacgatgc tggcgtagcc gccgtccacc tggccgatcc aaagataacg
      961 ccacggctca ctggttggag ttttcagaaa atcctcaagg cgcagcggca ataccgatgc
     1021 ctggagacgc tcccgggtgg cggcgaccca tttatcgtct gcgccgatcc gcgcagccag
     1081 aacagccaat ggtccgctat cgttcagaac tttctgctcg atcagttgaa ctcgcgcgac
     1141 ctgggcgcgc gcagaaggca cccagttcga cagcgcgtga tagccgctaa tgagacgctt
     1201 ttcgatcagc ccatcgagcc gctgcttgag ggtttcctcg cgctgcagca cggcctcggc
     1261 cgtggcgccg cgcactatat agaactgcgc gggggtcggc aggtcgagca actggctcac
     1321 tttgatttga tcgtcgagca gattcttggg cggattttgc aacagacgta tgtcatcgct
     1381 gatcccgagt cgtgaccaac cgaaaatggc cagcgccgcg aacaacgtag ccgcgacgag
     1441 cgtgcgtcga tcacgtccca ctaacggcca gcgcgccatg gaacctgtgt accagtccgc
     1501 cagtcggatt ttccccaaag tgtccggccg aaccagcaaa ggaaaccaaa agaccacggt
     1561 caaccatgcg aatactaggc cgagggcgga aaatacggca atctgccgca atcccggaaa
     1621 tggcgtaagc gccaggccca tgtagccgac gacggtcgtg atcaacgcga gcagcagtgc
     1681 cggcagcagg cgccgcaaca gttgccagga atcgacctgc gcatcggcgc cgacccgatt
     1741 gcatagaaaa taaatgccat agtcctgggc tccgccgatg agactggcgc caaacaccaa
     1801 gctcaccaaa tgcagccgat cgaacaacaa ccaggacgcg gacaaggcgc ccaggcaccc
     1861 gacggcgatc gataacatga acag
//
LOCUS       DATIRS010000482         4029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_626698, whole genome shotgun sequence.
ACCESSION   DATIRS010000482 DATIRS010000000
VERSION     DATIRS010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4029
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_626698"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            240..1151
                     /locus_tag="VLM90_06080"
     CDS             240..1151
                     /locus_tag="VLM90_06080"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HSQ12563.1"
                     /translation="MKILRFNDDQIGVIKNDNMVVDVSNTISARKAKGPQRVMEEIID
                     GWRKYRKRFEKVLAEQEGVPLASVQLRSPLARPGKFLAAFSNYIDRPERTADNFPNEY
                     FYKSPDLVGPDGEVELRDIPSCVVYQPEAEFAFVIGKTAKDVTEKKALDYVFGYVPMF
                     DISTRGMVRRTQFVGKGQGSHGCCGPWIITKDEIPDPHNVNVKSWTNGEPRQNYNTGA
                     MAHKIPNQIAWLTKLLTLNPGDVVATGTFHEGLAPVNSGDTIEIEFANMGRAKFKVVG
                     NSPRKDVPWLPGKNQPTPPPGGGMHIV"
     gene            complement(1240..2001)
                     /locus_tag="VLM90_06085"
     CDS             complement(1240..2001)
                     /locus_tag="VLM90_06085"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSQ12564.1"
                     /translation="MGLRRFNGTAFLLTLLALWELAAQAEWINALIVPPPSKILKIFS
                     ELTWSGQIPMQILVSMKRALAGYLLAAVVFIPLGIFMGLAPTVYRFFAVIVEMLRPVP
                     PPVVIPVALLFFGLGDEMKIFVIFFSCAWPILLNTIDGVRGIDWVLLNTARTFGLSRG
                     KTIWQVILPACSPQISTGLRVSLPIMLILVVISEMVGSTDGIGYFVLDSQRRFKVAQM
                     YAGMFALALLGYTLNQLFNLMQRLLLPWQRGRELE"
     gene            complement(2001..2780)
                     /locus_tag="VLM90_06090"
     CDS             complement(2001..2780)
                     /locus_tag="VLM90_06090"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSQ12565.1"
                     /translation="MNQVKPFNWLGWSSFASLLLLWEFGARATPKLELYFPPVSRILS
                     ALGQAFAAGSITQHALVTLARFAEGFLLAALLAVLAGVMLGYFRFFHSLLATMIELLR
                     PMPSVAIIPVAILLLGIGDGMIVSVTVYASLWPILINTIDGVRNIDPTLIDTGRTFGL
                     SRWRILWQIILPGASPFIATGLRVGLSIALILVTTAEMIAGSNGLGFFILDEERAMNS
                     ANMYAGIVVVALLGYLLNRLFLMIESRAMKWRHGMIARQAA"
     gene            complement(2777..3562)
                     /locus_tag="VLM90_06095"
     CDS             complement(2777..3562)
                     /locus_tag="VLM90_06095"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ12566.1"
                     /translation="MPILDVQSLSKSYRQAGGETTLAIGNITCQVEAGEFVSFVGPSG
                     CGKTTLLMTIAGLLAPSSGRVIVNGKEVSGPPANLVLLFQEYNKSLFAWRSVLGNVRF
                     GLAARGARPTGAAAAEDTARKLIELVGLKGFESHYPWELSGGMQQRVAIARALAYEPE
                     VLLMDEPFGSLDALTRLELEDTLLRLWAELKTTILFITHDIEEAIYLSDRIWVLSRRP
                     SHIMQELKSDFPRPRHQVTTRAEARFMELRNDIYRQIGTQGAP"
     gene            complement(3644..>4029)
                     /locus_tag="VLM90_06100"
     CDS             complement(3644..>4029)
                     /locus_tag="VLM90_06100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12567.1"
                     /translation="FAAVAARRPEARVLSNPWGDVLPRFLIASWFASDKWIQKNRGVA
                     QGFVRAINRGVDAIRSDQEGARAAMIKWAGLNPDFASKIGLPQFDKAIAEKDVQVTMD
                     LTYKYKMISKPLKAKDVLSDLATKA"
BASE COUNT          940 a         1229 c         1128 g          732 t
ORIGIN      
        1 cgaattaaaa cgcttcggtc aatgaaacct ctgctttcga tgttcgccgc cacctaacca
       61 ccatcccctg gccgctcgcc gaaccaagcg cgacgaagaa cgattccctg ctgcagcatc
      121 gcgcgcgacc gtagtacgcg cagttctccc gttgcgcgcc gcaatcggga ttttcagttt
      181 gacaagccca cccgcttgtc gcaaagataa gccgaaattt ggcccgagag gagattacct
      241 tgaagattct tcgtttcaac gacgaccaga tcggcgtgat caaaaacgac aacatggtcg
      301 tggatgtcag caacaccatc agcgcgcgca aagccaaggg gccgcagcgg gtgatggaag
      361 agatcatcga cggctggcgt aaatatcgta aacggttcga aaaggttttg gccgagcagg
      421 aaggcgtgcc gctggcgagc gtgcaactgc gcagtccgct ggcgcggccc ggcaagtttc
      481 ttgccgcctt cagcaactac atcgaccggc ccgagcgcac cgccgacaat tttcccaacg
      541 agtattttta taagtcaccg gacctggtcg gccccgacgg cgaagtcgag ctgcgcgata
      601 ttccttcctg tgtggtttat caacccgaag ctgagttcgc ctttgtcatc ggcaagacag
      661 ccaaggacgt aaccgaaaaa aaggccctgg actatgtgtt cggctatgtg ccgatgttcg
      721 acatctcgac ccgaggcatg gtgcggcgca cccagttcgt cggcaaaggc cagggttccc
      781 atggctgctg cggtccgtgg atcattacca aggatgagat tcccgatccg cataatgtca
      841 acgtgaaatc ctggaccaac ggcgagcccc ggcagaacta taacaccggc gcgatggccc
      901 ataagatccc caaccagatc gcctggctga ccaagctctt gacgctcaac cctggcgacg
      961 tcgtcgccac cggaactttt cacgaaggct tggcgccggt gaattccggc gacaccatcg
     1021 agatcgagtt cgccaacatg ggccgggcca agttcaaagt cgtcggcaac agcccgcgca
     1081 aagacgtgcc ctggctgccc ggcaaaaatc agccaacccc gcctcccggc ggcggcatgc
     1141 acatcgtcta gaaaaatgga gtaatggagt attggagtga tggaataatg ggttctctgg
     1201 aaacccaaca ctccattact ccaatccccg gttactccat cactccaatt ccctgccgcg
     1261 ctgccacggc agcaacaacc gttgcattag attgaatagc tgattgagcg tgtagccgag
     1321 aagcgccagg gcgaacatgc cggcatacat ctgcgcgacc ttaaagcggc gctgggaatc
     1381 cagcacgaaa tagccgatgc cgtcggtgct gccgaccatt tccgagatca ccacgaggat
     1441 cagcatgatc ggcaaactta cccgcagtcc ggtgctgatc tgtggcgagc aggcgggtaa
     1501 aatgacctgc cagatagttt taccgcgcga taggccgaag gttctggcgg tgttcaggag
     1561 cacccaatcg ataccgcgca caccgtcaat ggtatttaag agaatcggcc aggcgcagga
     1621 aaagaagatc acgaagatct tcatctcgtc gcccaagccg aagaacaaca gcgccacggg
     1681 gatcaccacc ggcggcggca ccgggcgaag catctcgacg atcaccgcga aaaaccgata
     1741 gacagtcggc gctaacccca taaaaattcc cagcgggata aacaccacgg cggcaagcaa
     1801 atagcccgcc agcgctcgtt tcatgctgac gaggatctgc atgggaatct gcccggacca
     1861 ggtcagctcg gaaaatattt tgagtatttt cgacggcggc ggcacaatca gcgcattgat
     1921 ccactcagcc tgggcagcga gctcccagag cgccaagagc gtcagcagaa acgccgtgcc
     1981 gttaaatcgc cgtagaccca tcacgccgcc tgccgcgcga tcatgccgtg gcgccacttc
     2041 atcgcgcggc tctcgatcat caagaacagc cgattgagca ggtagcccag cagggcgacg
     2101 acaacaatcc cggcgtacat attggcactg ttcatcgccc gctcttcatc gaggataaaa
     2161 aagcccagcc cgttgctgcc ggcgatcatc tccgcggtgg tgacgagaat caaggcgatc
     2221 gacaagccga cgcgcaatcc ggtggcgata aacggcgatg cgccaggcag gatgatttgc
     2281 cagagaatgc gccagcggct gagaccgaag gtgcggccgg tatcgatcag cgtggggtcg
     2341 atgttacgca cgccatcgat cgtgttgatg agaatcggcc agaggctggc ataaaccgtg
     2401 acactgacaa tcatgccgtc accgatgccg agtaaaagaa tcgccaccgg aatgatcgcc
     2461 accgacggca tcggccgcaa caattcgatc attgtcgcca gcaaactatg aaagaagcga
     2521 aagtagccga gcatcactcc agcgagcacc gccaaaagcg cagccagcaa gaaaccttcg
     2581 gcgaaacgcg ccaacgtgac cagcgcatgc tgcgtaatcg aacctgcggc aaaggcctgc
     2641 ccgagagcac tgagaattcg gctcaccggc gggaagtaga gttcgagctt gggcgtggcg
     2701 cgggcgccga actcccacaa tagcagtaac gatgcaaagc tcgaccagcc cagccaattg
     2761 aacggtttca cctggttcac ggcgcaccct gggtgccgat ctgccggtaa atgtcgttgc
     2821 gcagctccat gaaacgcgct tcagcgcggg tcgtcacttg atggcgcggc cggggaaaat
     2881 cgcttttgag ttcttgcatg atatgcgacg gcctccggct cagcacccag atgcggtcgg
     2941 aaagataaat cgcttcttcg atatcgtggg tgataaacag gatcgtcgtc ttgagctccg
     3001 cccacagccg cagcagcgtg tcttcgagct ccagccgcgt cagggcatcg agagagccga
     3061 acggttcatc catcaacaag acttccggct cgtaggccag cgcccgggcg atcgccacgc
     3121 gctgctgcat gccgccggag agttcccaag ggtagtggct ttcaaaccct ttcagaccga
     3181 ccagctcgat cagcttgcgc gccgtatctt ccgctgccgc cgcccccgtc ggtcgcgcgc
     3241 cgcgcgctgc taaaccgaag cgcacgttgc ccagcaccga ccgccaagcg aacagcgact
     3301 tattgtactc ctgaaacaac agcaccaagt tggccggcgg cccgctgact tccttaccgt
     3361 tgacgatgac gcggccggaa ctcggcgcca acaaacctgc aatggtcatc aacaaggtcg
     3421 tcttgccgca gccggaaggc ccgacgaagg aaacaaactc accggcctcg acctggcaag
     3481 taatattgcc aatcgccagg gttgtctcgc cgccggcttg ccggtagctt ttcgatagcg
     3541 attgaacgtc gagaatgggc acggcggggg tacggaatgg agtattggag tgatgggttg
     3601 ttaattatca atactccact actccatcac tccaactggg ttttcacgct ttcgtcgcca
     3661 gatcgctcag cacatccttc gctttgagcg gcttggagat catcttgtac ttataggtca
     3721 ggtccatggt cacctggaca tctttttcgg caatcgcttt atcaaattgc ggcaagccga
     3781 tcttgctggc gaagtcgggg ttgaggccgg cccatttgat catcgccgcg cgcgcgcctt
     3841 cttggtccga acgaatggcg tcgacgccgc gattgatcgc ccgcacaaac ccctgggcga
     3901 cgccgcggtt tttctgaatc catttatcgg aagcgaacca gctggcgatc aaaaatcgcg
     3961 gcaggacgtc gccccaggga ttagacaaca cgcgggcctc cggccggcgc gccgccaccg
     4021 cggcgaagg
//
LOCUS       DATIRS010000483         2958 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_36008, whole genome shotgun sequence.
ACCESSION   DATIRS010000483 DATIRS010000000
VERSION     DATIRS010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2958
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36008"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..787)
                     /locus_tag="VLM90_06105"
     CDS             complement(<1..787)
                     /locus_tag="VLM90_06105"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSQ12568.1"
                     /translation="MPYAKVRGVNINYQVLGTTGPWVALSPGGRRDLGGIQNQAGKLA
                     ELGYRVVIFDRRNCGASDVVIDGNESEYEIWADDVHELLRQLGALPAIVGGSSSGCRT
                     SLLFALRHPESVRALLLWRVTGGRFACERLAEEYYGQFITAARSGGMAAVCDMEHWQE
                     RIKARPQNRDVLMKMDPQQFIRVMSRWREYFLKGADLPVIGATEADLQSIHVPACIVP
                     GNDLTHGRQTGETLGRLLPSSEVHVLFPKHYDEPLSPREQWDEK"
     gene            complement(891..1046)
                     /locus_tag="VLM90_06110"
     CDS             complement(891..1046)
                     /locus_tag="VLM90_06110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12569.1"
                     /translation="MVDTGSIHIGLLDFLAPTRPEAAKANANEFVDLSFVQEVQASGL
                     IKQLYGR"
     gene            1305..2351
                     /locus_tag="VLM90_06115"
     CDS             1305..2351
                     /locus_tag="VLM90_06115"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12570.1"
                     /translation="MSFVGKLAVVTVVGSVMDRATLSVAGRAGAKMAAASISLLVFLS
                     SASAQERLERVNLAIPVTALSQLPSYAGVRFGLFREEGLDVQIVLMNGRLIGPALLQG
                     DLDYSTLADTMMRAATTGLPVKVLAFGGIRPALALNVRPEIKTGADLKGKSIAVTSIG
                     STTDIVAREIVRSFGLNPERDIVTQGLGSQANNQTALRTGAVAAALFTPPYDVIAEKE
                     GFRVIAWAGDVIKEQLQAGLVTADNKIARNPAQVKRMVRGFIKSLVFLRKEKNQVVEM
                     IAKQWKIEPDIAEKSYQVMIKTFSANGSASDSAIENVIQQTLKANKSQKQVSHAQVAN
                     LAFLEDAQKELGLR"
     gene            complement(2364..>2958)
                     /locus_tag="VLM90_06120"
     CDS             complement(2364..>2958)
                     /locus_tag="VLM90_06120"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12571.1"
                     /translation="ESVRGGFNFIRDNTAILGLMAMDTCVQFFGAYRSMMPVFARDIL
                     AVGPTGLGALLGVPAFGALAGSAIVMALGNPKKKGQLIIFVTLIYTAGLISFALSRSL
                     ILSLAIVFLLGLVDAIGETLRDTMIQLITPDPMRGRVKSFDQVFMSAGTYLGHAQIGT
                     ASTFLGVPGALVMGGCLGSAGVLLVAKFARGLREIDA"
BASE COUNT          633 a          847 c          924 g          554 t
ORIGIN      
        1 ccttttcgtc ccattgttcg cgcgggctga gcggctcgtc atagtgcttg ggaaacagca
       61 catggacttc actggatggc agcaagcggc cgagagtttc tccggtttgc cgtccatggg
      121 tgagatcgtt gcctgggacg atgcaggctg gtacgtggat cgattgtaaa tccgcctcgg
      181 tggcgccgat gaccggcaga tccgcgcctt tgagaaaata ttcgcgccag cgtgacatga
      241 ctcgaatgaa ctgctgcggg tccattttca ttaatacgtc gcggttttgt gggcgggctt
      301 tgatccgttc ctgccaatgt tccatgtcgc acactgcggc catgccgccg ctcctggccg
      361 cggtgatgaa ctggccgtag tactcttcgg ctaaacgctc gcaggcgaag cggccgccgg
      421 tcactcgcca gagcaagagc gcgcgcacgg actcgggatg acgaagagcg aagagcaggg
      481 aagtgcggca gcctgacgag ctgccgccga cgatggcagg caaggcgccc agttggcgga
      541 gcaattcatg aacgtcgtcg gcccagatct cgtactccga ctcgttgcca tcgatgacga
      601 cgtcggaggc gccgcagttg cgccggtcga agatgaccac gcggtagccg agctcggcga
      661 gcttgccggc ttggttttgt atgccgccga gatcgcggcg tccgcccggc gacagggcga
      721 cccatggccc ggtggtgccg agaacttgat agttaatatt aacgccgcgg acttttgcgt
      781 aaggcatagg gcacctccaa gtttcgactt gccgacacta tccgatgaac aggtttttaa
      841 gcaactcgtc aaacgctgaa gccagcagca tgattaccag ccatctgcgt ttacctgccg
      901 tacagctgtt tgatcaggcc cgacgcttgg acttcttgga caaagctcag atcgacaaat
      961 tcgttggcat tggctttggc cgcttcgggc cgggtgggcg cgagaaaatc gagcaagcca
     1021 atatgaatcg agcctgtgtc gaccatcgct gtttctcata ggttcccaac ccgcttacga
     1081 atcacgcctc caccgcccgg acattaagct cccacgccgt cgaattcaag aaaaattccc
     1141 tgcggaccga gccgcagggc gacaaccgga atgtgacgac cccccaatcg acaatgccac
     1201 ggaatcgcct tgacgcttaa agcgccggcg cggtaactat ggaacataac cggtgcggat
     1261 ttcgattttt gcgcgtgctg ggtgaagccg cggaggagaa ggcaatgtcg tttgttggga
     1321 aattagcagt cgttaccgtc gtcggcagcg ttatggatcg tgccaccctg tctgtggccg
     1381 gccgcgccgg cgcgaaaatg gcggcggcaa gtatttctct gttggtattc ttatccagcg
     1441 ctagcgcaca ggagcggctt gaaagagtca atctcgccat cccggtcacg gcgctgagcc
     1501 agttgccgtc ctatgccggc gtgcgcttcg gtctgtttcg cgaggaaggg ctcgacgtgc
     1561 agatcgtcct gatgaatggg cggttgatcg ggccggcgtt gttgcagggc gatttggatt
     1621 attccacgtt ggccgacacg atgatgcggg cggcgaccac cgggctgccg gtgaaagtgc
     1681 tcgccttcgg cggcattcgc ccggcgttgg cgctgaacgt tcggccggag atcaaaaccg
     1741 gcgccgatct aaaaggaaag agtatcgcgg tcacttccat cggtagcacc acggatattg
     1801 tcgcgcgcga gatcgtgcgc tccttcggtc tcaatcccga gcgcgatatc gtcacgcaag
     1861 ggctgggcag ccaggcgaac aatcaaaccg ccctgcgcac cggcgccgtg gcggcggcgc
     1921 tgttcacgcc gccttacgac gtcatcgccg agaaggaagg ttttcgcgtc atcgcttggg
     1981 ccggcgacgt gatcaaggag caattgcaag cgggtctggt gactgccgac aacaagatcg
     2041 cgcgcaaccc cgcacaggtg aagcgcatgg tgcgcggctt cataaagagc ctggtgttcc
     2101 tgcgtaagga aaagaaccaa gttgtcgaga tgatcgccaa acagtggaag atcgaaccgg
     2161 atatcgccga aaagagttat caggtgatga tcaagacgtt cagcgccaat ggctcggcaa
     2221 gcgacagcgc gattgaaaat gtcattcaac aaaccctcaa ggccaacaag tcgcagaagc
     2281 aggtaagcca cgcccaagtc gccaacctgg cttttctcga agacgcgcag aaagagttgg
     2341 ggctgcgcta accgcattgg cgatcaggca tcgatttcgc gcaaaccgcg cgcgaacttg
     2401 gccacgagca acacgccggc ggagccgaga cagccgccca tgaccaaggc gccggggacg
     2461 ccgagaaagg ttgacgccgt gccgatctgg gcgtggccca agtaggtgcc ggcggacatg
     2521 aagacttgat cgaagctttt cacccgaccg cgcatggggt cgggggtgat cagctggatc
     2581 atggtatcgc gcagggtttc gccgatggcg tcgaccagac cgagcagaaa aacaatcgcc
     2641 agcgagagga tcagcgagcg cgacaacgcg aaggaaatca gccccgcggt gtaaatcaat
     2701 gtgacgaaaa taatcaattg gcctttcttt ttcggattgc ccagcgccat gacgatggcc
     2761 gagccggcga gggcgccgaa ggccggcacg ccgagcagcg cgccaagacc ggtggggccg
     2821 acggcgagga tgtcgcgggc gaacaccggc atcatcgaac ggtacgcgcc aaaaaactgc
     2881 acgcaggtgt ccatggccat cagccccaag atcgccgtgt tgtcgcggat gaaattgaaa
     2941 ccgccgcgca cgctttcg
//
LOCUS       DATIRS010000484         1525 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1511518, whole genome shotgun sequence.
ACCESSION   DATIRS010000484 DATIRS010000000
VERSION     DATIRS010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1525
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1511518"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..660
                     /locus_tag="VLM90_06125"
     CDS             <1..660
                     /locus_tag="VLM90_06125"
                     /inference="COORDINATES: protein motif:HMM:NF012506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate/2-methylcitrate synthase"
                     /protein_id="HSQ12572.1"
                     /translation="LKYKPNPVLERALDILFILHADHEQNCSTNAMRGIGSSQVDPYS
                     SVAGAAAALYGPLHGGANEAVLRMLMEIGAKDKVPEFIEKVKGGSGRLMGFGHRVYKN
                     YDPRARIIKQIADQVFDVMGKNPLLEIALELERIALNDDYFIKRKLYPNVDFYSGLIY
                     QSMGLPMDMFPVLFAIARTVGWIAQWEEMLTDPDQKLARPKQIYLGAPTRDFVEMSKR
                     K"
     gene            complement(664..>1525)
                     /locus_tag="VLM90_06130"
     CDS             complement(664..>1525)
                     /locus_tag="VLM90_06130"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HSQ12573.1"
                     /translation="YMPIIAKVLSDEGLPEELAYLALIESEFQVATTSPAGAVGLWQF
                     VPSTARQYGLRIDDWIDERRDPVKSTKAAAAYLKDLHRYYGRWYLVTAAYNAGPAIID
                     KALQSSRASDFWGIKEKAQLSQETRNFVPKFVAVALIATNPKKFGFNNLRYDEPLEFD
                     EVEAEGLLKFTAAAEMAEADHATIKELNPALLRDVTPPGARGYRLRVPVGKGLVFAKA
                     GDYQRSREAEPVQVVTHEVKRGDTLASIAARYGQAVSALMELNGLTTARLQIGQKLRV
                     ILDGIRGSLR"
BASE COUNT          316 a          434 c          439 g          336 t
ORIGIN      
        1 ctcaagtaca aacccaatcc ggtgcttgag cgggctctcg acattctttt tatcttgcac
       61 gccgatcatg aacagaactg cagcaccaac gccatgcgcg gcatcggcag ctcgcaggtg
      121 gatccttatt catcggtggc cggggcggcg gcggcgctct atgggccgct ccatggcggc
      181 gccaacgaag cggtattgcg catgttgatg gagatcggcg ccaaggacaa agttcccgag
      241 ttcatagaaa aggtgaaggg cggctcgggc cgcttgatgg gcttcggcca tcgggtatac
      301 aaaaactacg atccgcgcgc gcgcatcatc aaacagatcg ccgaccaggt gttcgacgtg
      361 atgggcaaaa atccgctgct cgaaatcgcc ctggagctgg aacggatcgc gctcaacgac
      421 gattacttca taaaacgcaa actttatccc aatgtcgatt tctattccgg cttgatctac
      481 cagtcgatgg gcttgcccat ggatatgttc ccggtgctgt ttgcaatagc gcggacggtt
      541 ggttggatcg cccagtggga ggaaatgctc accgatccag accaaaagct ggctcggccc
      601 aagcagattt atctaggggc gccgacgcgc gactttgttg aaatgagtaa acgcaagtag
      661 agattagcgc agagacccgc ggatcccgtc gagaattacc cgaagcttct gcccgatttg
      721 caatcgcgcg gtggttaagc cgttgagctc catgagtgcg ctgaccgctt ggccatagcg
      781 tgcggcgatc gacgcgagtg tatcgcctcg tttgacctca tgcgtgacca cttgcaccgg
      841 ttcagcttcc cggctgcgct gataatcgcc ggctttggcg aagactagcc ctttaccgac
      901 cggtacccgt aagcgatagc cgcgcgcccc tggtggcgtc acatcgcgga gcagcgcggg
      961 attgagttct ttgatcgtcg catgatcggc ttcggccatc tcggccgcgg cagtgaactt
     1021 gagcaagcct tccgcttcca cttcgtcaaa ttccagcggc tcatcgtaac gcagattatt
     1081 gaaaccaaat tttttcggat tggtggcgat cagcgcgacc gcaacgaact tcggaacgaa
     1141 attgcgcgtt tcttggctca gctgggcttt ttctttgatg ccccagaaat cggatgcacg
     1201 gctgctctgc agcgctttgt cgatgatcgc cggtccagcg ttatatgcgg cggttacgag
     1261 gtaccaacgg ccatagtagc gatggagatc ctttaaatac gcggcggcgg ccttggtgga
     1321 tttcaccgga tcgcgccgtt catcgatcca atcgtcgatt cgcaacccgt actgacgcgc
     1381 cgtgctcggg acgaactgcc agagccccac ggcgcccgct ggggaagtcg tagccacctg
     1441 gaattcgctc tcgatcaggg cgaggtaggc caattcttca ggcagccctt catcgctcaa
     1501 aactttggcg atgatcggca tgtat
//
LOCUS       DATIRS010000485         1553 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1904120, whole genome shotgun sequence.
ACCESSION   DATIRS010000485 DATIRS010000000
VERSION     DATIRS010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1553
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1904120"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(188..949)
                     /gene="mtgA"
                     /locus_tag="VLM90_06135"
     CDS             complement(188..949)
                     /gene="mtgA"
                     /locus_tag="VLM90_06135"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: protein motif:HMM:TIGR02070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009274 - peptidoglycan-based cell wall
                     [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HSQ12574.1"
                     /translation="MRRVLFSTLVATLLVSAGYYFYFSLPDVSRLKQKNPHITALMDL
                     RDREYKKQNSRGRRQQIWVSYGAISEHIKKAVLISEDAGFYSHKGVDVAELKAAFMKD
                     LETLSFSRGGSTITMQLAKNLYLSPSKNPLRKLKEIIIAHQLENALSKRRIFEVYLNV
                     VELGRNIYGVEAAARHYFGKSAGSVDLVEAATLAALLPNPRNSKERGLAARRNIILNR
                     LASVGYLSQSENRNAQQLAPAKKVEEAEIDPPLEQ"
     gene            complement(930..>1553)
                     /locus_tag="VLM90_06140"
     CDS             complement(930..>1553)
                     /locus_tag="VLM90_06140"
                     /inference="COORDINATES: protein motif:HMM:NF026165.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HSQ12575.1"
                     /translation="RVLSRLFRNNTEAAVREIAGKLAQTSQPGNLNQALMELGAIVCT
                     PKEPRFGDCPVTSYCRSRDRLGQRQSAQPRPRASFRDVTWPLAIVNYHGKILLRRRQA
                     DGLLAKLWELPGAEIARTANPVAAIRDELKPLAVAGPRPQRLGELRHSITDRRIHAPV
                     LLYRWPLTKRLPPGWRWILPSQLHRYATSSMTSKAVKLFIEHEKSPI"
BASE COUNT          295 a          430 c          486 g          342 t
ORIGIN      
        1 gttcacgctt tgtccacggc tcgccgataa aaaacctgga ttccggcccc ggatcgagtc
       61 cgcggcaggc tctgcgccgg aatgacggaa gtacggtcgg ctgccagtcg acaatctcag
      121 caccgctctg aaaagcgtcg acggttgctt attgcgacca atggatgctt ccggcgggcg
      181 tggcaagtca ctgttcaagc ggcggatcga tctcagcttc ttcaaccttc ttggctggcg
      241 cgagctgttg ggcgttgcga ttttcactct ggctcagata gccgacactg gcgaggcggt
      301 tcaatatgat gttgcgccgg gcggctaggc cgcgctcctt ggagttgcgc gggttcggca
      361 gcagggcggc caaagtcgcg gcttcgacca gatcgacgga accggcggat ttgccgaagt
      421 agtgtcgcgc cgccgcttcg acgccgtaaa tattgcggcc caattcgacg acgttcaagt
      481 aaacctcgaa aatgcgccgc ttcgacaggg cgttttccag ctgatgggcg atgatgattt
      541 ctttcaactt gcgcagcgga tttttcgacg ggctgagata aaggttcttg gcaagctgca
      601 tggtgatggt gctgccgcct cggctaaagc tcaaggtctc aagatccttc atgaatgcgg
      661 ccttgagctc cgccacgtca acgcccttgt gactgtagaa cccggcgtcc tcactgatca
      721 ggacggcttt tttaatatgc tctgagatcg caccgtagga cacccagatt tgttggcgcc
      781 gcccgcgcga gttttgcttt ttgtactctc ggtcgcgcaa gtccatgagc gcagtgatat
      841 gaggattctt ctgcttgagc cgcgaaacgt cgggcaacga gaagtaaaaa tagtaaccgg
      901 cgctgaccag gagggtcgcg actaaggtgc taaataggac tcttctcatg ttcaataaat
      961 aacttgacgg ctttgctggt catcgatgag gtggcgtagc ggtgcagctg ggacggcagg
     1021 atccaacgcc agccgggtgg caggcgtttc gtcagcggcc aacgatagag caagaccggc
     1081 gcatgaatgc gccggtcggt tatgctatgg cgcagttcgc ccaagcgctg cggccgcggg
     1141 ccggcgacgg caagcggttt gagttcatcg cgaatcgccg ccaccgggtt tgccgttcgc
     1201 gcgatctcgg cgccggggag ttcccacagt ttagccagca agccatcggc ttggcggcgt
     1261 cgcaggagta tcttgccgtg ataattgacg atggccagcg gccaggtgac gtcgcgaaaa
     1321 cttgctcttg gccgcggctg tgcggattgg cgctgtccca gccgatcccg gctccggcaa
     1381 taagaagtca ccggacagtc gccgaagcgc ggctctttcg gcgtacagac gatggcgccg
     1441 agttccatca aagcttggtt gagatttccc ggttgcgagg tttgtgccag tttgccggca
     1501 atctcgcgca ctgccgcttc ggtgttgtta cgaaatagtc ggctaagcac gcg
//
LOCUS       DATIRS010000486         3182 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1511629, whole genome shotgun sequence.
ACCESSION   DATIRS010000486 DATIRS010000000
VERSION     DATIRS010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3182
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1511629"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..262)
                     /locus_tag="VLM90_06145"
     CDS             complement(<1..262)
                     /locus_tag="VLM90_06145"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HSQ12576.1"
                     /translation="MLFLLSAAAQAQSQSKNRIGVLLPELGRAQSQSLKGLNEVLKRL
                     GYIERKNLLVETRNAKGDRSALRPAANDLVARKVEVIFATGTR"
     gene            complement(310..1227)
                     /locus_tag="VLM90_06150"
     CDS             complement(310..1227)
                     /locus_tag="VLM90_06150"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSQ12577.1"
                     /translation="MAPGRNDFRVRFWGVRGSYPTTGPGTQDIGGDTACVEVNVGGQR
                     LIFDAGTGIIPLGKEICRRAATAPLAYVFLSHTHIDHLLGLYFFAPLLTAGARSFIYG
                     PGRSNGALWRTLQQLTHSNLFPVTFDELKGKTEVHSLAGGEVMRFSAPGARLTLRKPP
                     PPRRNDDGQQLSITTHKSSAHPRDGVLLYRVEYHGKALVYATDVEEQPGGYADVIEFA
                     RGADLLIHDAQYLHGEYHSKSKSKKGWGHSTVEMAAAVAAKAQVKKLVLFHHEPEHDD
                     RAMRRIERLSKKLFAESIVAYQGLELTLP"
     gene            1276..1410
                     /locus_tag="VLM90_06155"
     CDS             1276..1410
                     /locus_tag="VLM90_06155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12578.1"
                     /translation="MPALLVAGGISLFGAVGIIIGPALFALLRALLDLYSQEYANADE
                     "
     gene            1672..1917
                     /locus_tag="VLM90_06160"
     CDS             1672..1917
                     /locus_tag="VLM90_06160"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HSQ12579.1"
                     /translation="MTTDKEFFNVKYKEGSLDAKTAQLIFFAVCISIGHEEGATLHLK
                     RARECGASEDEITEAVVYAMRPAAAKVRNFAKAIVAK"
     gene            1959..2813
                     /gene="trxA"
                     /locus_tag="VLM90_06165"
     CDS             1959..2813
                     /gene="trxA"
                     /locus_tag="VLM90_06165"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HSQ12580.1"
                     /translation="MNQWTIDVNEENFEAAVLERSSEVPVLVDFWAEWCGPCKALGPV
                     LEKLADEYAGGFVLAKLNVDENPNLAGMFGIQGIPAVKLFRDGELASEFTGALPEPML
                     REFLTKYLPSANDKEAQAAVALEAEGKFAEAKAAYEAILAADANHGQALLGMARMAMN
                     GGDNAAALEFLDRISIVADERKEAERMIARLNLQAGGAQNEAALREKIAADPNNIEAR
                     FDLAQTLAGVEKYDEALSEFLQVVKADRKFKDDGARKAMIQIFEVLGSDDPLTDRYRS
                     ELAAVLFR"
     gene            2903..>3182
                     /locus_tag="VLM90_06170"
     CDS             2903..>3182
                     /locus_tag="VLM90_06170"
                     /inference="COORDINATES: protein motif:HMM:NF015862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HSQ12581.1"
                     /translation="MSMITLAQANRIIEAIFARGRELACRPMSVIVVEPGAKVKAFQK
                     EDDSAMMRFEMAYGKAYAALALGRSSSLVRMRNEERPLFMQYLMRASDD"
BASE COUNT          673 a          893 c          991 g          625 t
ORIGIN      
        1 ctcgggtgcc ggtggcgaag atcacctcga ccttgcgcgc caccaggtcg ttggcagcgg
       61 gacgcagcgc gctgcggtcg cctttggcgt tgcgggtttc gacgaggaga ttcttgcgct
      121 cgatgtaacc caaccgcttg agtacttcgt tcaagccctt gagggactgg gactgggccc
      181 ggccgagctc cggcagcaag acaccgatgc ggtttttgct ctgggattgg gcctgtgcgg
      241 cggcgctcag gagaaaaagc aatgcaaaga gctgccctgt tattggccag cgtgatttcg
      301 tcgggcgttt cacggcagcg tcaactccaa tccttggtaa gccactatag attccgcgaa
      361 caattttttg ctcagccgtt cgatgcgcct catggcccgg tcgtcatgct ccggttcatg
      421 atgaaacagc acgagttttt ttacctgcgc tttggcggcg actgccgccg ccatctccac
      481 ggtgctatgg ccccagccct ttttcgactt cgatttagaa tggtattcgc cgtgcaaata
      541 ctgcgcgtca tgaatcagca agtcggcgcc gcgggcaaac tcgatgacat cggcgtagcc
      601 gcccggctgc tcttcgacgt cggtggcgta gacgagcgct ttaccatggt actcgacgcg
      661 gtagagcaag acgccgtcgc gcggatgcgc cgagctctta tgcgtcgtga tcgatagttg
      721 ttgcccatcg tcattgcgcc gcggtggtgg cggctttcgc agcgtcagcc gcgcaccggg
      781 cgcgctgaag cgcatgactt ctccgccggc cagcgagtgg acttcggttt tgcccttgag
      841 ctcgtcgaaa gtaaccggaa acagattgct gtgggttagc tgttgcagcg tgcgccacaa
      901 cgcaccgttc gaccggcccg gcccgtaaat gaacgagcgc gctccggcgg tcaacagcgg
      961 ggcaaaaaaa tacagcccta gcaagtgatc gatatgggta tggctcaaaa acacgtaggc
     1021 aaggggcgcg gtcgcggcgc gccggcagat ttctttgccg agcggaatga tccccgtgcc
     1081 ggcgtcaaag atcagtcgct ggccgccgac gttgacttcg acacaagctg tgtcgccgcc
     1141 aatgtcttgc gtgcccggac cggtggtcgg atagctgccg cgcacacccc aaaagcgcac
     1201 gcgaaaatcg tttcgtcctg gtgccatcgc cgccatgtaa agcagatttg ccggaaaaat
     1261 aaaagatcaa acctgttgcc ggcactgctg gtggccggcg gcatctcctt gttcggcgcg
     1321 gtgggcatca ttatcggacc ggcgctgttc gcgctgttgc gcgcgctctt ggatctctat
     1381 tcccaagaat acgccaacgc cgatgaatga tcgttagggg tggcggttgg attccgcgaa
     1441 gaattccgaa tatattggcc gcgactcggg gctcaacaac ttcgccgaag ccgtgcccat
     1501 ggccgacgaa cggcagaaga agttagccgc aaaacctgtc cagagcgaac gcgaaggaac
     1561 cggggccgcg caaagggcgc aaaaaaagaa tcagaattcc taggggcggg tttcaaaccc
     1621 gcccgccgag tcgcgattgt cgggccgtaa ctgaaacaat aaggagaaaa tatgaccacc
     1681 gataaagaat ttttcaacgt gaagtacaaa gaagggtcgc tcgatgcgaa aaccgcgcag
     1741 ctgattttct tcgcggtctg tatctcgatc ggccacgaag agggcgccac gctgcatttg
     1801 aaaagagctc gcgagtgcgg cgcgtcggag gacgagatca ccgaagcggt ggtttacgcg
     1861 atgcgcccag cggcggccaa ggtgcgcaac ttcgccaagg cgatcgtcgc caaatagttt
     1921 gttccaaacc tgccaataat gaagcgagtg agacaaatat gaaccagtgg acgatcgacg
     1981 ttaacgagga aaattttgag gcggcggtgc tggagcgctc gagcgaagtg ccggtgttgg
     2041 tcgacttctg ggccgagtgg tgcggcccgt gcaaagccct agggccggta ctagaaaagt
     2101 tggccgacga atacgccggc ggctttgttc tggctaaact caatgtcgac gaaaacccca
     2161 acctggcggg catgttcggc atccagggaa ttcccgcggt gaaactattt cgcgacggcg
     2221 agctggcctc ggagttcacc ggcgccttgc ccgagccgat gctgcgcgag tttctcacca
     2281 agtatttacc ctcggcgaac gacaaggaag cgcaggccgc cgtggcgctt gaagccgaag
     2341 gaaagtttgc tgaagccaaa gccgcctatg aagcgatctt ggccgccgat gccaatcatg
     2401 gccaggcgct gttgggcatg gctcgcatgg ccatgaacgg cggcgataac gccgcggcgc
     2461 tggaatttct cgacagaatt tcgatcgtcg cagacgagcg caaagaagcc gagcgcatga
     2521 tcgctcgcct caatcttcag gcgggcggtg cgcaaaatga ggctgctctt agggaaaaaa
     2581 tcgccgcgga cccgaacaat atcgaggcgc gtttcgatct cgcacagacg ctggccggcg
     2641 tcgagaaata cgacgaagcg ctcagcgagt ttctccaagt cgtcaaggcc gaccgcaagt
     2701 tcaaagacga cggcgcgcgc aaggcgatga tccaaatctt cgaagtgctg ggctcggacg
     2761 atccattgac cgaccggtat cgttcggagc tggcggcggt gctgtttcgc tgagtggtta
     2821 attcttgccg cttgaccggg gaagggcgac cgccggtcgt cccgacgatt gacaactgca
     2881 ccaagatcgc agaggaggtc ctatgagcat gatcacgttg gcgcaagcta atcgcatcat
     2941 cgaagcgatc ttcgcgcgcg gccgtgagct ggcttgccgg ccgatgagtg tgatcgtcgt
     3001 cgagcccggc gccaaggtca aagcatttca gaaagaagac gactcggcga tgatgcgttt
     3061 cgagatggcc tacggcaaag cttacgcggc gctggcgctt gggcgctcgt catcgttggt
     3121 gcgcatgcgt aacgaagagc gtccgttgtt tatgcagtat ctgatgcgcg cctcggacga
     3181 tc
//
LOCUS       DATIRS010000487         1803 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_233316, whole genome shotgun sequence.
ACCESSION   DATIRS010000487 DATIRS010000000
VERSION     DATIRS010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1803)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1803)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1803
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_233316"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(5..547)
                     /gene="pyrR"
                     /locus_tag="VLM90_06175"
     CDS             complement(5..547)
                     /gene="pyrR"
                     /locus_tag="VLM90_06175"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: protein motif:HMM:NF003549.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HSQ12582.1"
                     /translation="MKNSKNKTKRILTAAQIKTIVERFAKEMSKQYGTLDSVAFIGIR
                     NRGPYIAKRLAEMIKKRHGKDIPIGEMDITLYRDDLNALLPGGTVDHTRIPFEIANKI
                     VVLFDDVLNTGRTVRAAVDHLIDLGRPRMIHLAVMIDRVGRELPIAATYVGKKINLSA
                     RGNVQVKLKEVDKIDEVVLG"
     gene            complement(534..>1803)
                     /locus_tag="VLM90_06180"
     CDS             complement(534..>1803)
                     /locus_tag="VLM90_06180"
                     /inference="COORDINATES: protein motif:HMM:NF006771.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="M20 family metallo-hydrolase"
                     /protein_id="HSQ12583.1"
                     /translation="EPSSIPAVNQRRLMRDLNAIGRIGIGDRGGVTRLVFSIKELRSR
                     QVLIHLMRQAGLKIHIDAIGNIFGRYDGGNPRAPAVLAGSHLDTVIHGGKYDGPVGVI
                     GALEAIRTINENKIQVRSPLEVVCFVGEESSRFGFSTLGSSLAAGEVHSKDLANAVDP
                     QGTKLENVLGSLGITRRNLKSLKRDPKSLKAYLELHIEQGPILEAKGKRIGLVTSIAA
                     PSRFKVIFKGRADHSGTTPMEMRKDALVAAAIFIGYVEKICRRYSAMAKGRVVGTVGA
                     MKIEPGVINAVPGKTELSVDIRSTSAQSKDRVARLVKAQARAIARRRRIGVDVLTLRE
                     EDPVPLDQRLLRITRELCDDKTIDYEIMPSGAGHDAMQMAKTTPAGMIFVPSKRGISH
                     NPLEWTAPADIALGAQLLMETMLRVANEKL"
BASE COUNT          326 a          511 c          557 g          409 t
ORIGIN      
        1 ggtttcagcc aaggacgact tcgtcgattt tgtccacctc tttcaacttg acctgaacat
       61 tgcctcgcgc cgataggttg attttcttgc cgacgtaggt cgcggctatg ggcaattccc
      121 ggccgacgcg gtcgatcatc accgccaggt ggatcatgcg cggtcgcccg aggtcgatca
      181 aatggtcaac tgcggcccgc accgtgcgcc cggtattcaa cacgtcgtcg aaaagaacga
      241 cgatcttgtt ggcgatctcg aatgggatgc gcgtgtgatc gacggtaccg cccggcaaga
      301 gcgcgttcag gtcgtcgcgg tagagcgtga tatccatctc gccgatggga atatctttgc
      361 cgtgacgctt cttaatcatc tccgccagcc gcttggcgat ataagggcca cggttgcgaa
      421 taccgatgaa cgccacggag tcgagggtgc cgtattgctt cgacatctct ttggcaaagc
      481 gctcgacgat ggttttgatt tgggcggccg tcaaaattcg tttggtcttg ttcttagagt
      541 ttttcattgg cgactcgaag catggtttcc atgagcagct gggcgccgag ggcgatatcg
      601 gctggagcgg tccattcgag aggattgtgg ctgataccgc gcttgctcgg tacgaatatc
      661 atgcctgccg gcgtagtttt cgccatctgc atggcgtcgt gtcccgcgcc ggatggcata
      721 atctcatagt cgatggtttt gtcgtcgcag agctcgcggg tgatacgcag caagcgctgg
      781 tcgagaggca ccggatcctc ctcgcggagg gttaagacgt caacgccgat gcggcgccgg
      841 cgggcgatgg cgcgcgcctg cgctttgacc aggcgcgcta cccgatcctt cgattgcgcg
      901 gaggtgctgc gaatatccac cgagagctcc gttttaccgg gcaccgcgtt gattactccc
      961 ggttcgattt tcatggcgcc gacggtgccg accacgcggc cctttgccat ggcagaataa
     1021 cggcggcaaa ttttttcgac gtatccgata aatattgcgg cggcaaccag cgcgtccttg
     1081 cgcatctcca tcggcgtggt gccggagtgg tcggcgcggc ccttgaatat tactttgaac
     1141 cggctcgggg cggcgatgga ggtgaccagg ccgatacgct tccccttggc ctcgagtatc
     1201 ggaccctgtt caatgtgcaa ttccaagtac gccttgaggc ttttcggatc gcgcttcaaa
     1261 gatttcaggt tacggcgggt gatgcccaga ctcccgagca cgttttcgag cttggtgccc
     1321 tgcgggtcca ccgcgttggc cagatctttg gaatgaacct cgccggcggc gaggctgctg
     1381 ccgagcgtag aaaagccgaa ccggcttgac tcttcgccaa cgaagcaaac gacttcgagg
     1441 ggcgagcgaa cctggatttt gttttcgttg atcgtgcgaa tggcttcgag agcgccgatc
     1501 acacccacag ggccatcata cttgccgccg tggatgacgg tatcgaggtg tgaaccggcc
     1561 aaaaccgccg gtgctctggg attccctccg tcgtaccggc cgaagatgtt gccgatggcg
     1621 tcgatgtgaa ttttgagccc ggcttggcgc atcaaatgga tcagcacttg ccggctgcgc
     1681 agttccttga tggaaaagac caaccgcgtg acgccgccac ggtcgccgat gccgatgcga
     1741 ccgatggcgt tcaagtcgcg catgaggcgc cgctggttga cggccggtat gctcgatggc
     1801 tca
//
LOCUS       DATIRS010000488         1541 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_36294, whole genome shotgun sequence.
ACCESSION   DATIRS010000488 DATIRS010000000
VERSION     DATIRS010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1541
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36294"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..618)
                     /locus_tag="VLM90_06185"
     CDS             complement(<1..618)
                     /locus_tag="VLM90_06185"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HSQ12584.1"
                     /translation="MRALALKKVQNSGLDNGHQPNFSSTAAQDAGLLDAYSTAVVQAA
                     EKISPSVAFIEVTKVPRERNIAARSAREMRGSGSGFVFTPDGFILTNSHVVHGAANLA
                     VTLSDGRRFDAAIVGDDPCTDLAVIRISARELVAAPLGDSANIRVGQLAIAIGNPYGF
                     QYSVTAGVVSALGRSLRSESGRLIDNVIQTDAALNPGNSGGPLVNS"
     gene            717..1055
                     /locus_tag="VLM90_06190"
     CDS             717..1055
                     /locus_tag="VLM90_06190"
                     /inference="COORDINATES: protein motif:HMM:NF013777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSQ12585.1"
                     /translation="MKTKDTMCPAEYTLAMIGGRWKIPLIFHLQAGARRFSELSRALR
                     GVTQKMLTQQLREMERDGLVARKVYAQVPPRVEYSLTDLGLSLRPVVDAMCRWGEVYG
                     VQKSAREARA"
     gene            1052..1444
                     /gene="acpS"
                     /locus_tag="VLM90_06195"
     CDS             1052..1444
                     /gene="acpS"
                     /locus_tag="VLM90_06195"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HSQ12586.1"
                     /translation="MIISTGVDLAEVDRIRAALEDPRIGLRFRARVYTAKEIAYCEKK
                     QRGKYESYAGRFAAKEAVMKALGRGWGAKVRWLDIEVARARSGKPEIVLHDKTAQLAA
                     ELGIRRWALSITHTKQHGLASVIAEDDG"
BASE COUNT          328 a          418 c          506 g          289 t
ORIGIN      
        1 ggagttgacc agcggcccgc cggaatttcc tgggttgagc gccgcgtcgg tctggatcac
       61 gttgtcgatc agacggccgg actcggaacg aagcgagcgg ccgagagcgc tgacgacccc
      121 ggcggtgacg ctgtactgaa agccgtacgg attgccgatg gcgattgcca attggccgac
      181 gcggatgtta gctgaatcgc ccagcggtgc ggcgaccagt tccctggcgg aaatccgaat
      241 cacggcgaga tcggtgcatg ggtcgtcgcc gacgatggcg gcgtcgaagc gccggccatc
      301 gctcagagtc acggccaaat tcgccgcgcc gtggacgacg tggctgttag tgaggatgaa
      361 gccatccgga gtaaatacaa agcccgagcc gctgccgcgc atttcgcgag cgctgcgcgc
      421 ggcaatgttg cgctcccgag gtacctttgt aacctcgata aacgccaccg acggactgat
      481 tttctcggcc gcttgaacga cggctgtaga gtaggcatcg agcaggccgg catcctgcgc
      541 ggcggtcgat gaaaaattgg gctgatggcc gttgtcgagc ccgctgtttt ggactttttt
      601 caaagctagc gctctcatgg tccctccgta acatggaaag ttaatcaccc tggagctttc
      661 tgttaagtac gcacccggcg gtgctatagt atccaaagag taactcagga ggctcaatga
      721 aaaccaagga cacgatgtgc cccgccgaat acacgctggc gatgatcggc gggcgctgga
      781 agatcccgct gatttttcac ctccaagcgg gagcgcgaag gttttccgag ttgtcgcggg
      841 cgttgagagg cgtgacgcaa aaaatgttga cgcagcaact tcgggaaatg gagcgcgacg
      901 ggctggtcgc gaggaaagtt tacgcgcaag tgccgcccag ggtcgaatac tcgctgacgg
      961 atttgggctt gagcctgcgc ccggtggtgg atgcgatgtg ccgttggggt gaagtctacg
     1021 gcgtgcagaa gtcagcgcga gaggcgcgcg catgatcatc agcaccggcg tagacttggc
     1081 tgaagtcgat cgcatccgag cggcgttgga agatccgcgc atcggactgc gttttcgcgc
     1141 tcgcgtctat acggccaaag aaatcgccta ctgcgaaaag aagcagcgcg gcaagtatga
     1201 aagctatgcc ggccgcttcg ccgccaaaga ggcggtgatg aaggcgctcg ggcgcggctg
     1261 gggcgcgaaa gtgcgctggc tcgatatcga agtagcgcgg gcgcgcagcg gcaaaccgga
     1321 aatagttttg cacgacaaga cggcgcagct cgccgccgag ctcggcattc gccgttgggc
     1381 gctgtcgatt acccatacca agcagcatgg cctggcttct gtgattgccg aggacgatgg
     1441 ctgagaggca ttgtttacca aataagaaat ccggaatcga aaattttacc gcaaagagcc
     1501 cagggcggct ctgctgcaac caattgggta agagtttcca c
//
LOCUS       DATIRS010000489         2314 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1118992, whole genome shotgun sequence.
ACCESSION   DATIRS010000489 DATIRS010000000
VERSION     DATIRS010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2314)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2314)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2314
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1118992"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..331)
                     /locus_tag="VLM90_06200"
     CDS             complement(<1..331)
                     /locus_tag="VLM90_06200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12587.1"
                     /translation="MGEAVAVESCIPETNTHGEPVNRVAHVRWRGIGVGLAPMILMTS
                     LSATKKSAPSQALSIAGSPLRHQLKHEKENLDAACRTAEAINGKHDQSRHLLSRTLNG
                     QPADNVVR"
     gene            complement(310..1341)
                     /locus_tag="VLM90_06205"
     CDS             complement(310..1341)
                     /locus_tag="VLM90_06205"
                     /inference="COORDINATES: protein motif:HMM:NF018435.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HSQ12588.1"
                     /translation="MEESNEPLCVGIDLGTSRSSISASNGERHVVDSYVGWPLDMVAR
                     KIIKKSILIGREALDNRSMLDLRRPLERGIMKEGSEKDQEAVQEILKHLINLAGIKQK
                     GKNKSKVRAVVGVPAEAFRVSRQNLRNTMEGIADSVMLVSEPFAVAYGLEALLHALVI
                     DIGAGTADFCVMQGRYPTEDDQRTLSAAGDSIDEQLEKLVRERHPDAQFSVHMIRQWK
                     EQWSFVGEPKDRVLVTAPVKGKASELDITHEMRTACESILPPICETLQDILSKVEPDF
                     QDKVRNNVILAGGSSLIAGLTDAIQKSLIELGGGRATVVKDPVFAGCDGGLAIARDAS
                     SADWEKLSL"
     gene            complement(1345..>2314)
                     /locus_tag="VLM90_06210"
     CDS             complement(1345..>2314)
                     /locus_tag="VLM90_06210"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: protein motif:HMM:NF013670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HSQ12589.1"
                     /translation="KLLRGVVQDNVDIVQGVRTKYPVKRRLPFRYWLSACIAMLGIAY
                     LAIPSQVVSTANTSANDATGTVSAANIAQTPESAGALNSPRPLDKRAVPLSIKRIIID
                     PGHGGESGAISQSGVMEKEITLDVALRLRRLMENGPYDVLLTRETDQSVPLDKRVAFA
                     NENKGDLFISIHVNSLEPKSLRVLETYYVGPTDDPATLRLASIENKDSGYSLSDYKKI
                     LEKIYVDARHDESRTFAKHIQAQLHHSLKTVNPWLENRGVKTAPFVVLIGTQMPAILV
                     EISALSNDEEVKLLTKEDYRENIALALRQGIKNYARNFNLPERKGN"
BASE COUNT          413 a          626 c          726 g          549 t
ORIGIN      
        1 tcctgacgac gttatccgcc ggttgcccgt tcaacgtccg gcttaaaaga tgccgcgact
       61 ggtcgtgctt gccgttgatc gcctcggcgg tgcggcaggc tgcgtcgaga ttttcttttt
      121 cgtgctttaa ttgatgccgg agaggagatc cggctatgga cagtgcctga ctcggtgcgg
      181 atttttttgt cgcggataac gaggtcatga ggatcatcgg tgcgaggcca accccgatgc
      241 cgcgccagcg aacatgagca acccggttaa ccggctcacc atgagtattt gtttcaggga
      301 tgcacgattc tacagcgaca gcttctccca atcggcgctc gaagcatcgc gggcgatggc
      361 caagccgccg tcgcaaccgg cgaacaccgg atctttgacg accgtcgcgc gacccccgcc
      421 gagctcgatc agcgatttct ggatcgcgtc agtgagtccg gcgatcagcg agctgccgcc
      481 ggcgaggatg acgttgttgc ggactttgtc ttggaagtca ggttcgactt tcgacaggat
      541 atcttgcaag gtctcgcaaa tcggcggcag gatgctttcg caggcggtgc gcatctcgtg
      601 agtgatatcg agttcgctgg ctttgccttt gaccggtgcg gtgacgagga cgcggtcttt
      661 aggttcaccg acaaagctcc attgctcctt ccactggcgg atcatgtgca cggaaaactg
      721 cgcgtcgggg tggcgttcgc ggaccagttt ttccaactgt tcgtcgatgg aatcgccggc
      781 ggcggacaga gtgcgctggt cgtcttcggt gggataacgc ccctgcatga cgcaaaagtc
      841 ggcggtgccg gcgccgatat cgatcaccaa ggcatgcagc agcgcttcca ggccgtaagc
      901 cacggcgaag ggttcagaga ccagcatgac gctgtcggcg atgccttcca tggtattgcg
      961 caggttttgc cggctcactc ggaaggcctc agccggcacg ccgaccaccg cgcgcacttt
     1021 cgatttgttt ttaccttttt gcttgatgcc ggcgaggttg atcagatgtt tgaggatctc
     1081 ctgcaccgcc tcttggtctt tctccgagcc ttccttcatg atgccccgtt cgagcggacg
     1141 gcgcaggtcg agcatggagc ggttgtcgag cgcctcgcgg ccgatcaaga tgcttttttt
     1201 gatgatcttg cgcgccacca tatcgagcgg ccaaccgacg tagctgtcga ccacatggcg
     1261 ctcgccgttt gacgcggaga tcgagctgcg cgatgtgcca agatcgatgc cgacgcagag
     1321 gggttcattg ctttcttcca tgacctaatt gcctttcctc tcggggaggt tgaaattgcg
     1381 cgcgtagttc ttgatgccct ggcgcagggc aagggcgata ttttcgcgat aatcctcttt
     1441 tgtcaacaac ttaacctctt cgtcgttgga cagcgccgag atttcgacca ggatggccgg
     1501 catctgggtg ccgatcagga cgacaaaggg ggcggtcttg acgccgcggt tctccagcca
     1561 gggattgacc gttttaagtg agtgatggag ctgggcttgg atgtgtttgg caaaggttct
     1621 ggattcatcg tggcgcgcgt cgacgtaaat tttttccaga atttttttat agtccgacag
     1681 cgagtagcct gagtctttgt tttcgatgct tgccagcctg agggtcgccg gatcgtcggt
     1741 gggtccgacg tagtaggttt ccaggacgcg aagagatttc ggttccagcg aattcacgtg
     1801 gatcgagatg aacagatcgc ccttgttctc attggcgaag gccacccgct tgtcgagtgg
     1861 caccgactgg tcggtttcac gcgtgagcag gacatcgtag gggccatttt ccatgagccg
     1921 gcgcaggcgc agcgccacgt ctaaggtaat ttctttttcc atgacgcccg attgcgagat
     1981 cgcgccggac tcgccgccat ggccgggatc gatgatgatt ctcttgatcg acagcggtac
     2041 ggctcttttg tctagcggtc ggggtgaatt tagcgccccg gcggactccg gggtttgtgc
     2101 gatattggca gcggaaaccg tgccggtcgc gtcgttggcc gaggtgttgg cggtggaaac
     2161 gacctgtgag gggatcgcca gataggcgat gccgagcatg gcgatgcagg ctgaaagcca
     2221 atagcggaag ggtagcctgc gcttgacggg atatttagtt ctgaccccct ggacgatatc
     2281 gacgttatcc tggaccacgc cgcgcaggag cttc
//
LOCUS       DATIRS010000490         2948 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_36330, whole genome shotgun sequence.
ACCESSION   DATIRS010000490 DATIRS010000000
VERSION     DATIRS010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2948)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2948)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2948
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36330"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1736)
                     /locus_tag="VLM90_06215"
     CDS             complement(<1..1736)
                     /locus_tag="VLM90_06215"
                     /EC_number="2.2.1.2"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF007080.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional transaldolase/phosoglucose
                     isomerase"
                     /protein_id="HSQ12590.1"
                     /translation="MNPLKELGAQGQSIWLDYIRRNLIRSGELKRMVDDDGIRGVTSN
                     PTIFEKAIAGSTDYDEALRAMLAQDGGADVEKLYEPLAIEDIQMAADVLRPVYDASNG
                     DDGYVSLEVSPHLAHDTAGTISAAKRLRAAVDRPNLMIKVPATPAGIPAIEQLIADGL
                     SINVTLMFSMSHYEAVARAYVKGLERCATPAKVASVASFFVSRVDSAVDNELAKIGTA
                     EAQAIAGKIAIANSKVVYRRFMEIFHGEGFASLRSRGARVQRPLWASTGTKNPAYSDV
                     LYVENLIGPETVNTLPPDTINAFRDHGKIPGATVKAGLDDADAALATLAKLGINLDRI
                     TEKLQVDGVASFSASFDQLMGALEKKRQAMAGAALNQQELHLGQSLKRVEKRLKDWQT
                     AQVGKRIWEKDHKVWSKDMQPELTDRLGWLELPETMEKEVAALSAFADKAKADGMKHV
                     VLLGMGGSSLAPEVFQETFGNAPGYPKLRVLDSTHPAAVRAVEGGIDLAHSLFVVSSK
                     SGTTTETNSFFFYFWDKLKKLGADPGPQFVAITDPGTPLEQLAKERNFRGTFNAPAEV
                     GGRYSALTMFGLV"
     gene            complement(1750..2208)
                     /gene="rpiB"
                     /locus_tag="VLM90_06220"
     CDS             complement(1750..2208)
                     /gene="rpiB"
                     /locus_tag="VLM90_06220"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: protein motif:HMM:NF004051.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HSQ12591.1"
                     /translation="MRIAIGADHAGFDLKQTLAAYLRHHGHEVIDQGTDSDQPVDYPD
                     FAEAVGNAVLAGAAERGVLVCGSGVGASVSANKLPGIRAGLCHDTYSAHQGVEHDAMN
                     ILVLGARIIGVEMARELVDHFLAAKFNGEERHLRRVAKIKALEQRYGKTV"
     gene            complement(2211..>2948)
                     /locus_tag="VLM90_06225"
     CDS             complement(2211..>2948)
                     /locus_tag="VLM90_06225"
                     /inference="COORDINATES: protein motif:HMM:NF014799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HSQ12592.1"
                     /translation="SLCGVRAYGSGFLIFSDYARPAIRLGAIMEIPAIHVFTHDSIGV
                     GEDGPTHQPVEQLASLRAIPGLITLRPGDANEVVEAWRVIMRLKHEPVALALTRQPLP
                     TLDRTKYGAAAGLAKGAYILADADCAKPQLILIGTGSEVYLCVEAYEQLKKAGVQARV
                     VSMPSWELFERQSKEYREQVLPSTVTARVAVEQCVAIGWAKYVGMTGAVIGMKSFGAS
                     APFAQLQKKFGFTVENIVAAAKAQLPG"
BASE COUNT          571 a          911 c          844 g          622 t
ORIGIN      
        1 accaacccga acatggttag cgccgaatag cgcccgccga cttccgccgg cgcattgaaa
       61 gtgccacgaa aatttctctc tttggcgagc tgctccaacg gcgtgccggg atcggtgatg
      121 gcgacaaatt gcgggccggg atcggcgcca agcttcttca gtttgtccca gaagtaaaag
      181 aaaaacgagt tcgtctccgt ggtcgtgccc gacttgctcg aaactacaaa gagcgaatgc
      241 gccaaatcga tgccgccctc gaccgcccgc accgccgccg gatgagtgct gtcgaggacg
      301 cgcaacttcg gatagcccgg ggcattgcca aaagtctcct gaaacacttc cggcgccaag
      361 ctcgacccac ccatgccgag cagcacgaca tgtttcatgc cgtcagcttt ggccttgtcg
      421 gcgaacgcgc tgagcgcggc gacttctttc tccatggttt cgggaagctc gagccaaccc
      481 agacgatcgg tcagttccgg ctgcatgtcc ttcgaccaaa ctttgtgatc tttttcccag
      541 atacgtttgc cgacttgagc cgtctgccag tccttgagcc gtttttcgac gcgcttaagg
      601 gattggccga ggtggagctc ttgttgattc aaggcggcgc cggccatcgc ctggcgcttt
      661 ttctccaacg cgcccatcag ctgatcgaag gaagctgaga acgacgccac gccgtcaacc
      721 tgcaacttct ccgtgatcct atcgaggttg atgccaagtt tcgccaaggt cgccagagcg
      781 gcgtccgcat cgtctaaacc ggctttgacc gtcgcgccgg gaatcttgcc gtgatcgcga
      841 aaagcgttga tggtatccgg cggcagcgtg ttgactgttt ccgggccgat gagattctcg
      901 acgtaaagaa cgtcggaata agccggattt ttagttcccg tgcttgccca tagaggccgc
      961 tgcacccgcg cgccgcggct gcgcagcgaa gcaaatcctt cgccgtgaaa gatctccata
     1021 aaacggcgat agacgacttt ggaattggcg atggcgattt taccggcaat cgcttgcgct
     1081 tccgccgtgc cgatttttgc cagttcatta tcgaccgcgc tgtcgacccg gctgacgaaa
     1141 aacgacgcca ccgaggcgac cttggccggc gtcgcgcaac gttccaaacc tttcacgtag
     1201 gcgcgcgcta ccgcttcata atggctcatg gaaaacatca aggtgacgtt gatgctcagt
     1261 ccgtcggcga tcagctgctc gatggcggga atgccggcgg gcgtcgccgg tactttgatc
     1321 atcaggttgg gccggtcgac cgcggcccgc agccgcttag ccgcgctgat cgtccctgcg
     1381 gtgtcatggg ccaaatgggg cgacacttcg aggctgacgt agccgtcgtc gccgttgctg
     1441 gcgtcgtaaa ccgggcgcag cacgtcggcc gccatctgaa tgtcttcgat ggccagcggc
     1501 tcgtagagtt tttccacgtc cgcgccgccg tcctgcgcca acatggcgcg cagcgcctcg
     1561 tcgtagtccg tgctgccggc gatggctttt tcaaagatcg ttggattgct ggtgacgccg
     1621 cggatgccgt cgtcgtcgac catgcgcttc aactcgccgc tgcgaatcaa gttgcgccgg
     1681 atgtaatcga gccagattga ctggccttgg gcgccgagtt ctttcaaagg attcatattt
     1741 taatctccgt caaaccgttt tgccgtagcg ctgttccagg gctttgattt tcgcaactct
     1801 gcgcaggtgc cgttcttcgc cgttaaactt cgccgctaga aaatgatcca ccaactcgcg
     1861 cgccatttcg acaccgataa ttctcgcgcc gagcacgaga atattcatgg catcatgctc
     1921 gacgccctgg tgtgccgaat aagtgtcatg gcacaggccg gcgcggatgc cgggtaattt
     1981 gttcgccgat accgaagcgc cgacgccgct gccgcagacc agcacgccgc gttccgctgc
     2041 gcccgccagc acggcattgc cgaccgcttc ggcgaagtcg ggataatcca ccggctggtc
     2101 gctatcggtt ccttggtcga tgacttcatg gccatggtga cgcagatagg cggcgagagt
     2161 ttgctttaaa tcgaagcccg cgtgatcggc accgatggca atgcgcatgc ttaccctggc
     2221 aattgcgctt tggccgcggc gacaatgttt tccacggtaa agccgaactt tttctgtaat
     2281 tgtgcaaacg gcgccgacgc gccgaaactt ttcataccga tcaccgcgcc ggtcatgccg
     2341 acatattttg cccagccaat ggccacgcat tgctcgacgg cgacgcgcgc cgtgaccgtc
     2401 gaaggcaaaa cctgttcgcg atattccttg ctctggcgct cgaacaattc ccatgacggc
     2461 atgctgacga cgcgcgcctg gacgccggct tttttgagct gctcgtaagc ttcgacgcac
     2521 aaataaactt cactgccggt gccgatcaaa atcaactgcg gcttggcgca gtcggcgtcg
     2581 gccaagatat aagcgccttt ggccaagccg gcggcggcgc cgtacttggt ccggtccaac
     2641 gtcggtaacg gctggcgcgt caatgctagc gccacgggct catgcttcaa ccgcatgatc
     2701 acacgccaag cctcgaccac ttcgttagca tcgccagggc gaagcgtaat cagacctgga
     2761 atcgcgcgta gcgacgccag ctgctccacc ggctgatggg tcggtccgtc ttcgccgacg
     2821 ccgatggagt catgggtgaa gacatgaatc gcgggaatct ccataatcgc tccgagccgg
     2881 atcgccggtc gagcgtaatc gctgaaaatg agaaatcccg aaccgtaagc gcgcacgccg
     2941 cacagcga
//
LOCUS       DATIRS010000491         1566 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_528006, whole genome shotgun sequence.
ACCESSION   DATIRS010000491 DATIRS010000000
VERSION     DATIRS010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1566
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_528006"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..556)
                     /locus_tag="VLM90_06230"
     CDS             complement(<1..556)
                     /locus_tag="VLM90_06230"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: protein motif:HMM:NF012901.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HSQ12593.1"
                     /translation="MASSGIAFVFPGQGSQAVGMGKELCDQFGVATEVFAEADEALGF
                     SLSQLCFSGPEADLKLTENTQPAILTMSVVALRVLEAETDLRPAFVAGHSLGEYSALV
                     AVGALAFGDAVRVVRARGRLMQQAVPAGQGAMAVVLGLEMDAVRALCADASQDEIVAP
                     ANYNGGGQIVIAGAKNAVARAMALA"
     gene            complement(546..>1566)
                     /gene="plsX"
                     /locus_tag="VLM90_06235"
     CDS             complement(546..>1566)
                     /gene="plsX"
                     /locus_tag="VLM90_06235"
                     /EC_number="2.3.1.274"
                     /inference="COORDINATES: protein motif:HMM:TIGR00182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043811 - phosphate:acyl-[acyl carrier
                     protein] acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HSQ12594.1"
                     /translation="VLVGPPEVLTAELAKHPGVPPITIAPASQVVPMHESPSAALRNI
                     DSSMRVAFDLMKRGEADAVVSAGNSGAMMALGMFVMGKLTQVARPAILVVVPSMGKGT
                     VVVDAGANVDCKPRHLLQFGLMGSIYAESVLAVAKPRVGVLSNGEESSKGTELTRAAS
                     ALLGATGLNYIGYVEGRDIFNDKVDVVVCDGFTGNVALKTMEGVASFAGEVLKGAFQK
                     NVTSKVGYLMSRNSLRAAYRRLDYAEYGGAPLIGLDGVAIVAHGGSNALAIKSAIRLA
                     RDAVDHEMNRRIARALGDADSGEEGKKEGLPHKLWARFKSKIDAMGEKAEPETEEEER
                     RRGGE"
BASE COUNT          316 a          539 c          421 g          290 t
ORIGIN      
        1 tggccagcgc catggcgcga gccaccgcgt tcttggcgcc ggcgataacg atctgtccgc
       61 cgccgttgta attggctgga gcgacgattt cgtcctgact ggcatcggcg cacagagcgc
      121 gcacggcatc catctccaat cccaggacaa ctgccatggc gccctggccg gccggcaccg
      181 cttgttgcat caaacgaccg cgcgcacgga cgacccgcac ggcatcgcca aacgccaatg
      241 cccccaccgc caccagagcg ctgtactcgc ccaggctatg gccggcgaca aaggccgggc
      301 gcaggtcggt ttccgcttcg agcacgcgca atgcgaccac cgacatcgtc agtatcgcgg
      361 gttgggtatt ttcggtgagc ttcaaatcgg cttccggacc ggagaaacaa agctggctga
      421 gagaaaatcc cagcgcctcg tcggcctcgg caaaaacttc cgtagcgacg ccaaattggt
      481 cgcacaactc tttgcccatg ccgaccgcct gcgaaccctg accgggaaat acgaatgcga
      541 tgccgctact cgccacctct cctccgttcc tcttcctccg tctcaggctc ggccttctcg
      601 cccatggcat cgattttcga tttgaagcga gcccagagct tgtgcggcaa accctctttc
      661 ttgccctctt caccgctgtc cgcgtcgccc agggccctcg cgatgcggcg attcatctca
      721 tggtcgacgg cgtcgcgcgc taaacgaatg gcacttttga tcgccaaggc attggagccg
      781 ccatgggcga caatcgccac gccgtccaaa ccgatcagcg gcgcgccgcc atactcggca
      841 taatccaatc tgcgatacgc cgcccgcagc gaattgcgac tcatcaggta gcctaccttg
      901 ctggtaacat ttttctggaa ggcgcctttt aaaacctcgc cggcaaagct cgccacccct
      961 tccatggtct tgagcgcgac attgccggtg aagccgtcac acaccacgac gtctactttg
     1021 tcgttgaaaa tatcccgccc ctcgacataa ccgatgtagt ttaggcccgt cgcacccaac
     1081 agcgcactgg cggcacgggt caactcggtg cccttgctcg actcttcacc attgctcaac
     1141 acaccgacgc gcggtttagc gacagcgaga acgctctcgg cataaatcga gcccatgaga
     1201 ccgaactgca gtagatgcct gggtttacaa tcgacattgg caccggcatc gacgaccacc
     1261 gtgcccttgc ccatgctcgg caccacaacg agaatcgccg gccgcgccac ttgggtaagc
     1321 ttgcccatga cgaacatgcc gagcgccatc atggcgccgg aattgcccgc gctgaccacg
     1381 gcatcggcct cgccgcgctt catcaaatcg aaggcgaccc gcatcgacga atctatattg
     1441 cgcagcgcgg cactgggcga ctcatgcatc ggcaccactt gagatgccgg agcgatggtt
     1501 attggaggca caccgggatg tttggcaagt tcagccgtga ggacctcagg cggaccgacc
     1561 aggacg
//
LOCUS       DATIRS010000492         1785 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_233518, whole genome shotgun sequence.
ACCESSION   DATIRS010000492 DATIRS010000000
VERSION     DATIRS010000492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1785)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1785)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1785
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_233518"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..190
                     /locus_tag="VLM90_06240"
     CDS             <1..190
                     /locus_tag="VLM90_06240"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="regulates pyrimidine biosynthesis by binding to the
                     mRNA of the pyr genes, also has been shown to have uracil
                     phosphoribosyltransferase activity; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase"
                     /protein_id="HSQ12595.1"
                     /translation="AVDHLIDLGRPRMIHLAVMIDRGGRELPIAANYVGRRIDLKAGG
                     NVEVRLKEVDRTEEVLVE"
     gene            336..1652
                     /locus_tag="VLM90_06245"
     CDS             336..1652
                     /locus_tag="VLM90_06245"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ12596.1"
                     /translation="MRRTMFILVTALLGFVFDTASARDVVIVTSFPKELFETYKKTFE
                     AKHPGTTVVINSKQTNAGVTYLRETKAKPEADIFWVSAPDAFQTLDTDGLLEKYAPPK
                     EIMAKIPAKIGNFPVHDPDGKYFGFAISGYGLMWNKNYMKAHKLPPPKEWTDLTQARY
                     YNHLIISAPSRSGTTHLTVETILQAYGWDKGWALLLNAGGNMGSITERSFGVPEAVIS
                     GQYGVGVVIDFFGLSAIASGQPVEFAYPSLTSVVPASVGIVKGGPNPQEARAFVNYLL
                     SEAGQTVLFAPEIARLPVIPELYAKAPKDYPNPFKKKLGGVEFNDELSSSRRDVVNSL
                     YDHIITFRHKELREAWKSIYSAEEALAKSKAASAAQGKSLIADARKFATQMPINDKRA
                     ADKEVSGAFRSKSGLKSHLETEWENAARGNYSKAKELAEKAAALAK"
BASE COUNT          429 a          534 c          504 g          318 t
ORIGIN      
        1 ggcggtggat cacttgatag acctcggccg cccgcgcatg atccacctgg cggtcatgat
       61 cgaccgcggc ggccgcgaac tgccgatcgc cgccaactac gtcggcaggc ggatcgattt
      121 aaaagccggc ggcaacgtcg aagtcaggct gaaagaagtc gacaggaccg aggaagtatt
      181 ggtggagtga ggaaagatct tattcgccac ggacggcaac gtttatgcgc gctgagcgga
      241 tgaattaacc gcattgtaac aattagactt gacacagctg ggccctcgtg gtgacttacc
      301 gccacgaggg ctttttttca ccttaggagg ctaatatgcg tcgaacaatg ttcattttag
      361 tgactgcgtt gctcggtttc gtctttgaca ccgcctcagc cagagacgtc gtcatcgtca
      421 cctcgttccc caaggagctg ttcgagacct acaaaaaaac ctttgaggcg aaacatcccg
      481 gcaccacggt ggtcatcaac agcaaacaaa ccaatgccgg cgtcacttac ctgcgcgaga
      541 ccaaggcgaa acccgaagcg gatatctttt gggtcagcgc gccggatgcg tttcagaccc
      601 tcgacaccga cggcctgttg gagaagtacg cgccgcccaa ggagatcatg gccaagatcc
      661 cggccaagat cggcaacttt ccggtccacg atcccgacgg caaatatttc ggcttcgcca
      721 tcagcggcta cggtttgatg tggaataaaa attacatgaa agcgcacaag ctgccgccgc
      781 ccaaggagtg gaccgacttg acgcaggcgc gctactacaa tcatctgatt atcagcgcac
      841 cgtcgcgcag cggcaccacg cacctgaccg tcgagaccat cctgcaagcc tatggctggg
      901 acaaaggctg ggcgctgctc ctcaacgccg gcggcaacat gggcagcatt actgagcgca
      961 gcttcggtgt ccccgaggcg gtcatcagcg gccaatacgg cgtcggcgtg gtcattgatt
     1021 tttttggcct gtcggccatc gccagcggcc agccggtgga gttcgcctat ccgtcgttga
     1081 cctccgtggt gccggccagc gtcggcatcg tcaaaggcgg ccccaacccg caggaggcgc
     1141 gcgctttcgt caattacctt ctcagcgaag cgggacagac cgtgttgttc gccccggaga
     1201 tcgcgcgatt gccggtgatc ccggagctct acgccaaagc gcccaaggat tatcccaatc
     1261 cgttcaagaa aaaactcggc ggcgtcgaat tcaacgacga gctgtcatcg agtaggcgcg
     1321 acgtagtgaa ctcgctgtac gaccacatca tcaccttccg ccacaaagag ctgcgcgaag
     1381 cctggaagag catttacagc gccgaagagg ccctggcaaa aagcaaggcg gccagcgcag
     1441 cccaggggaa atcgctgatc gccgacgccc gaaaattcgc gactcaaatg ccgatcaacg
     1501 acaagcgcgc cgccgacaag gaagtcagcg gcgccttcag gtccaagtcc ggcctcaaat
     1561 cccatctcga aaccgaatgg gaaaacgccg cccgcggcaa ctacagcaaa gccaaagagc
     1621 tggcggaaaa agccgcggca ttggcgaagt agtttcacgg gaaccgcata aagcggctga
     1681 gcgacgacaa atggaaccag tgattcacca cgaaggcacg aagttcacga agggttccga
     1741 aaatcaaaac ttccgaactt cgtgttcttc gtgccttcgt ggtga
//
LOCUS       DATIRS010000493         1631 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_921872, whole genome shotgun sequence.
ACCESSION   DATIRS010000493 DATIRS010000000
VERSION     DATIRS010000493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1631)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1631)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1631
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_921872"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1519)
                     /locus_tag="VLM90_06250"
     CDS             complement(<1..1519)
                     /locus_tag="VLM90_06250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12597.1"
                     /translation="MRQPEEIVPGKPLFFATAMPVAGFGTGVLVESHMGRPTKVEGNP
                     THPASLGATDVLAQASILDLYNPDRSPAITYRGRIRPWNAFLSALREALDSETKSRGA
                     GLRILTGSVTSPTLAEQLRALLKQYPAAKWHQYEPAGRHHSRAGSLLAFGSYAQTQYR
                     LDQADIVLALDAEALSCGPGHLRYARDFAQRRKPTTGAQAMSRFYALESTPSPVGALA
                     DHRLALAPKAIEDFASAIATRLGIGAVAAGAPLPPTSQRWADALVDDLKQHRGASVII
                     AGETMTPAVHALAHAMNSALGNIGRTVIYTEPAEANPVDEIASIKELAEDIERGNVAT
                     LIVVEGDPVYNAPADLGFAEKLPKVPVRMHLSLDRNQTSALCQWHVPAAHYLESWSDV
                     RAYDGTVTILQPLIAPLYDGKTAHELLAALSANPQRSSYESVRDYWQQQTGKVPADFT
                     RWWRKSLHEGVVEGTAFEPKSMTLRLGTINSQLNIHNSQSSEISKNGAAEHKPKLL"
BASE COUNT          317 a          468 c          511 g          335 t
ORIGIN      
        1 cgagcaattt tggcttgtgc tctgcggcgc cgtttttcga aatttcagag gattgagaat
       61 tgtgaatgtt taattgggaa ttaattgtcc caagtcgcag tgtcattgac ttgggctcaa
      121 aggccgtgcc ttcgaccact ccctcatgca gcgacttgcg ccaccagcgg gtaaaatccg
      181 ccggcacttt accggtctgc tgttgccaat agtctcgcac cgattcgtag gacgaacgct
      241 gcggattggc gctcaaggcg gcgagcaatt cgtgcgcggt cttgccgtcg tagagcggcg
      301 cgatcagcgg ttgcaggatc gtcaccgtgc catcgtaggc gcgcacatcg ctccatgatt
      361 ctagatagtg cgccgccgga acatgccact ggcaaagcgc cgaggtttga ttgcggtcaa
      421 ggcttagatg catgcgcacg ggcaccttgg gcaatttctc ggcaaagccg agatcggccg
      481 gcgcgttata gaccggatcg ccctcgacga cgatcagtgt cgcaacattg ccacgctcga
      541 tatcttctgc caactctttt atcgaggcga tttcatcgac cggattggct tctgccggct
      601 cggtgtaaat aaccgtccgg ccgatattgc caagcgcgct gttcatagca tgggcgagcg
      661 cgtggacggc gggagtcatg gtttctccgg cgataatcac gctggcgccg cgatgctgct
      721 tgagatcgtc gacgagcgcg tcggcccacc gctgtgaggt cggcggcagc ggcgcgccgg
      781 ctgcgacagc gccgatacct aaccgagtgg cgatcgcgct ggcaaaatcc tcgattgctt
      841 taggtgccaa tgctagccgg tgatccgcca gggcgcccac cggcgagggc gtgctttcga
      901 gcgcataaaa acggctcatg gcctgcgcgc cggttgtggg cttgcgtctt tgcgcaaaat
      961 cccgggcgta gcgcagatgg ccgggtccgc aggagagagc ttcggcgtcg agagctaaga
     1021 cgatgtcggc ttggtccaat cggtactgag tctgcgcgta ggagccgaac gccaacaaac
     1081 tgccggcacg gctatggtgc ctgcctgcgg gttcatactg atgccatttg gcggccgggt
     1141 attgttttaa tagcgcgcgc aattgttcgg ccaatgtcgg cgaagtgacg ctaccggtta
     1201 gaatgcgcag ccccgcgccg cgggatttag tctcgctgtc gagcgcttca cgcaacgcgc
     1261 tcaaaaaagc attccaagga cggatccggc cccgataagt gatcgcaggc gagcgatcgg
     1321 gattataaag gtccaagatg gaagcctgcg cgagaacatc tgtggcgccc aggctggcgg
     1381 gatgagtggg attgccttcg actttggtcg gccggcccat atggctttca accaacaccc
     1441 ccgtgccaaa tcccgccact ggcatagccg tagcgaaaaa taacggcttg ccgggcacga
     1501 tctcttcggg ttgacgcaca tagggtacga tcgtttccga cggggcgcgc gaacacctgt
     1561 tcagcccggc gagcgctagc gacgcgccca tcaaccgcag gaatccgcgt ctggtcagcg
     1621 gatcgaagag g
//
LOCUS       DATIRS010000494         1860 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1413896, whole genome shotgun sequence.
ACCESSION   DATIRS010000494 DATIRS010000000
VERSION     DATIRS010000494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1860)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1860)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1860
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1413896"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..418
                     /locus_tag="VLM90_06255"
     CDS             <1..418
                     /locus_tag="VLM90_06255"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12598.1"
                     /translation="PFPILRQLTAMVFGGIPEMFPKLRVGYLEVGCGWLPYWAERMDE
                     EWEKRGKVEAPLCKKKPSEYLFSECSYYGCEPEEKMIGYVTQEIGSKTLMYASDYPHW
                     DMSWPESATILWNRDDISLEVKKDLLLNNAKRFYNI"
     gene            577..>1860
                     /locus_tag="VLM90_06260"
     CDS             577..>1860
                     /locus_tag="VLM90_06260"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSQ12599.1"
                     /translation="MIQTKGLTGAQSMLRVLGKMGVEKIFASPGSEWSPLWEALAEPG
                     VEGMPQYYSTRHEEIAVGMASGYAKSTGKLPAVVIHTTVGALHATMAMRAALHEQVPM
                     VVFAGESIGFGEDEGPDVGGQWQGHLGDMGGPAKLVDHTVKWSFGVNTKSIVPSTVQR
                     ACRLAMAGPRGPVFVSMPMEYMFDTMTKDVPSDLGSSPLATADPQGIEDLANLLAGAQ
                     NPVIVAEDAGKTMKSVNLLVEIAELLGCPVVETRSTGVINIPRTHALHSGYDVKEGVQ
                     GADVIFLASVIAPWHPASITPAKGAKVAMLDENPLRAEIPYYGYQCDLCLTGEIESSL
                     EHLLAALKKKVSKGDPARMRRAEELKAKNDARRKKWRDEAIALGSQKPMDTRWVAHEI
                     SQVLPKDAMVVEETITHRLAVHRYLDNLTPGSFFNG"
BASE COUNT          411 a          524 c          571 g          354 t
ORIGIN      
        1 tccgtttcca atactccgtc agttgaccgc gatggtattc ggcggcattc cggaaatgtt
       61 tcccaaactg cgcgtcggtt atctcgaagt cgggtgcggt tggctgccgt actgggcgga
      121 gcgcatggac gaagagtggg agaagcgcgg caaagtcgaa gcgccgctgt gcaaaaagaa
      181 accgagcgaa tatctgttca gcgaatgcag ctactacggc tgcgaacctg aagaaaagat
      241 gatcggctac gtgacccagg agatcggctc gaaaaccttg atgtacgcgt ccgactatcc
      301 gcactgggat atgagctggc cggaatcggc gacgatcctg tggaatcgcg acgatatttc
      361 gctcgaagtc aaaaaggatc tgttgcttaa caacgctaaa cgtttctaca acatttaatt
      421 caaccgtcat tcccagggaa acgaggaatc tcgatttgcc gcgccgcggc gggtcggatt
      481 cctcgttgct ttcagcagcg gaggatgaca tagaattagg cgcaatttta atcttatcaa
      541 ctgacctaag acggtaaatt ttgagaggag tcgagcatga ttcaaactaa aggattgacc
      601 ggggcacagt cgatgctgcg tgtcctggga aaaatgggcg tcgaaaaaat cttcgcgtcg
      661 ccgggatcgg aatggtcgcc gctctgggaa gcgctggcgg agccgggcgt cgaaggcatg
      721 ccgcaatatt acagcacgcg ccatgaagag atcgccgtcg gcatggcgag cggctatgcc
      781 aagtccacgg gcaagctgcc cgccgtagtc attcacacca ccgtgggcgc cttgcatgcc
      841 accatggcga tgcgcgcggc gctgcacgag caggtgccga tggtagtgtt tgccggcgag
      901 tcgatcggct tcggcgaaga tgaaggaccg gatgtcggcg gtcagtggca gggccatctc
      961 ggcgacatgg gcgggccggc caagctggtc gatcacacgg tcaaatggag cttcggcgtc
     1021 aacaccaagt cgatcgttcc gtccaccgtc cagcgcgcct gccgcctggc catggctggt
     1081 ccgcgcgggc cggtgttcgt gtcgatgccg atggaatata tgttcgacac catgaccaag
     1141 gatgtgccgt cggatcttgg cagttcaccc ttggcgacgg ccgatcccca gggcatcgag
     1201 gatctcgcca atctgctcgc cggcgcgcag aacccggtga tcgtcgccga agatgccggc
     1261 aagacgatga agagcgtcaa tctcctggtt gagatcgccg agctgctcgg ctgcccggtg
     1321 gtcgaaaccc gcagcaccgg cgtgatcaac attccgcgca cccatgcctt gcacagcggc
     1381 tacgacgtta aagaaggagt gcagggcgcg gatgtaatct ttttggcctc ggtcatcgcg
     1441 ccctggcatc cggcgtcgat cacgccagcc aaaggcgcca aagtcgccat gctcgatgag
     1501 aatccgctgc gcgccgaaat tccctattac ggctatcagt gcgatctttg cctcaccggc
     1561 gagatcgagt cgtcgctgga gcatttgctc gcggccttga agaagaaagt ttccaagggc
     1621 gatccggcgc gcatgcgccg cgccgaagag ctcaaagcca agaacgacgc gcggcgcaaa
     1681 aaatggcgcg acgaagcgat tgcattgggc agccaaaagc ccatggacac ccgctgggtc
     1741 gcccatgaaa tcagccaggt gctgccgaag gacgccatgg ttgtcgaaga gaccatcaca
     1801 catcgcctgg cggtgcatcg ttacctcgat aatctgacgc cgggatcgtt cttcaacggc
//
LOCUS       DATIRS010000495         1740 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1610362, whole genome shotgun sequence.
ACCESSION   DATIRS010000495 DATIRS010000000
VERSION     DATIRS010000495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1610362"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..348)
                     /locus_tag="VLM90_06265"
     CDS             complement(<1..348)
                     /locus_tag="VLM90_06265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12600.1"
                     /translation="MAELYPYPRFSIAERDRRWQAVRELMRQQNLDVIVTPQNSGHSA
                     DYQANTRYLTHCGGGEPDLAAVFPIDGEVTAIATSAGPRWPTVQDWVTDAREARRNYG
                     KVIVERLKELGVDH"
     gene            complement(404..1582)
                     /locus_tag="VLM90_06270"
     CDS             complement(404..1582)
                     /locus_tag="VLM90_06270"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HSQ12601.1"
                     /translation="MIPQLSIQERDRRYQLVRAEMARRGIDVLLLPANTGRWEQLQGD
                     SRYLTSIGGFATEMFTVFPAQGEVTAYVFNRAGWWQKAHHWVSDVRDGRNRWGQNAIE
                     RIKELGLDKGTIGISGLAGLVRAPEGIIPYTSVKNIQEAFPQAKIVNATDMMQEIRAI
                     KSSEEVSFLERSAAIIEKAIDAMKQTAKPGVSEKEVYATMLHAMLSNGGELPTLFFLS
                     AGPNLFNSSFVPTDYVIQNGDNLVGEIEAKYGGYAAQAVSPAVVGKPDPAYQAMVEAS
                     RACFEAILAAMKPGVTFGTLFDIYTKTVEGAGAYSWNHPMMHARGLGDDGPALMGDKD
                     LERFAKIELKAGMTFILKPQVRPTQGKGRASVGDTVTVTENGARRLGKRDMKLVVIDV
                     "
BASE COUNT          359 a          525 c          459 g          397 t
ORIGIN      
        1 atgatcgacg cctaattcct tcaagcgctc gacaatcacc ttgccgtaat tgcgccgcgc
       61 ctcgcgcgcg tcggtgaccc aatcctgcac cgtcggccaa cgcggcccgg cggaagtagc
      121 gatcgccgtc acctcgccgt caatcggaaa aaccgccgcc agatcgggtt cgccgccgcc
      181 acagtgagtc aagtaacgcg tgttggcttg atagtccgcc gaatggccgc tgttctgcgg
      241 cgtgacgatg acgtcgagat tctgctggcg catcaactcg cggacagcct gccatcggcg
      301 gtcgcgttca gcaatagaaa aacgcggata gggataaagc tcagccatga tgaattgtga
      361 ttcctaactt tgcgtctttg cgcctttgcg ggagatattc cgattacaca tcgatcacga
      421 ccaatttcat atcgcgcttg cccaagcggc gcgcgccgtt ttcggtcacc gtcacggtat
      481 cgccaacgct ggcgcggcct ttgccctggg tcggccgcac ttgcggtttg agtatgaaag
      541 tcatgccggc cttgagctca atcttggcaa atcgctcaag atccttgtca cccatcagcg
      601 ccggcccgtc gtcgcccaac ccgcgcgcat gcatcatcgg gtggttccaa gaataagctc
      661 ccgcgccttc gacggtcttg gtgtagatgt cgaacaacgt gccgaaagtc acgcctggtt
      721 tcatggcagc gagaatcgct tcgaaacagg cgcgcgaggc ttcgaccatc gcttgataag
      781 ccggatcggg tttaccgacg accgccggac tgaccgcttg cgcggcatag ccgccatatt
      841 tggcttcgat ctcaccgaca agattgtcac cgttctgaat tacgtagtcg gtgggcacaa
      901 aagagctatt gaacagattc ggcccggcgc tgagaaaaaa caatgtcggc aactcaccgc
      961 cattggaaag catggcatgc agcatggtcg cgtagacttc tttttcgctc acgcccggct
     1021 tggcggtttg cttcatcgcg tcaatggctt tctcgatgat cgccgcggag cgctccagaa
     1081 aagacacttc ctcggagctc ttgatggcgc gaatctcctg catcatatcg gtggcgttga
     1141 cgatcttcgc ttgggggaac gcttcttgaa tgttcttcac cgaagtatac ggaatgatcc
     1201 cctcgggcgc gcgcaccaga ccggcgagac cggagatgcc gatggtgcct ttgtcgaggc
     1261 ccaattcctt gatgcgctcg atggcgttct gaccccagcg gttgcgcccg tcgcgcacat
     1321 cgctaaccca gtgatgtgcc ttctgccacc agccggcgcg attgaaaaca tacgctgtga
     1381 cctcgccctg cgcggggaaa acggtaaaca tctcggtggc aaaaccaccg atggaagtta
     1441 aataacgcga gtcgccttgc aactgctccc agcgcccggt gttggccggc agtagcaaca
     1501 catcgatgcc gcgcctggcc atctccgcgc gcaccaattg ataacgccga tctctttctt
     1561 gaatcgataa ttggggaatc atcatttcct cactttgttc ggaatctcaa atttcatatt
     1621 ccagattcaa aattggctcg cactataatt tgtaattttg aatttggagt ctggaatcat
     1681 cttatttccc cgacttctgc cgcgctgcgt tgatcaaatc gcccaccggc ttccattcca
//
LOCUS       DATIRS010000496         1652 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_134962, whole genome shotgun sequence.
ACCESSION   DATIRS010000496 DATIRS010000000
VERSION     DATIRS010000496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1652
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134962"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1588)
                     /locus_tag="VLM90_06275"
     CDS             complement(<1..1588)
                     /locus_tag="VLM90_06275"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HSQ12602.1"
                     /translation="MSDPILGLTMLGLIVGAIMMGFPTAFTLMGLGMIFGALAFWDPS
                     QHWWQNRIFDLMVQRTYGVMVNDTLLSVPLFVFMGYVMERAALVDRMFHSVQLAFRRV
                     PASLAVTTLLVCAFWGIASGIVGAVVVLMGVIAMRPMLNAGYDVRLAAGAITAGGTLG
                     ILIPPSVMLIVYAAVAGQSIVKLYAAAMLPGFFLTFLYLVYILGWAIVDHRIAPKLTP
                     DQYRLKVPDWLQRLEHGPSKRVFGNLITLLVRPGLLRDAKTADGKPLGYGHIVNNFVA
                     LMVPLALMLGTFTGTWWYVVIHNAPAAAAVAKSQTAPEVRSPGQSAPAPGEKPQALGS
                     STDKPQELTSVEEQATELGQAETTVQPTEPSTPADAPPQEMGTLAESSAAAAAGKVPE
                     NFYPWFWSFAVFSALLLALYYRRMDGEQFEILKELSISVVPLGVLTIIVLAVILLGIC
                     TATESAAVGALGALYLAVLVKYPRSCGWWSLAGGVIGVALGIPRGDIAALIVSGSLGA
                     AFIGTVVPLALYLPKSAELRR"
BASE COUNT          377 a          509 c          486 g          280 t
ORIGIN      
        1 tacggcgcag ctcggcagac ttcggtaagt acagtgcaag cggcacaacg gtaccgatga
       61 aagcggcgcc gagagaacct gacacgatca gcgcggcgat gtcgccgcgc ggaatgccga
      121 gagcgacgcc gatgactccc ccggctaagc tccaccaacc gcagcttcgt gggtatttca
      181 ccagcacggc caggtagagc gcgcccaagg cgcccacagc tgccgactcg gtggcggtgc
      241 aaatacccag gagaatcacg gccagcacga tgatcgtgag tacgcccaag ggaaccactg
      301 aaatggacag ttctttgagg atttcgaact gttcgccgtc catgcgccgg taatacaacg
      361 ccaacaagag cgccgaaaac acagcgaaac tccaaaacca ggggtaaaaa ttttccggca
      421 ccttgcccgc ggctgcggcg gccgacgact ctgcaagagt gcccatttcc tgcggcggag
      481 cgtccgccgg agtggacggt tcggtcggtt gcaccgtggt ttccgcctgg cccaattccg
      541 ttgcctgctc ttcgacgctg gtcaattctt gcggcttgtc ggtagaactg cctagcgctt
      601 gcggtttctc ccccggcgct ggtgccgatt gcccgggcga tcgcacttcc ggtgccgttt
      661 gcgatttggc gactgccgcc gctgccggcg cgttatgaat aaccacatac caccaggtac
      721 cggtgaaggt tcccaacatc agcgccagcg gcaccatcaa cgcgacaaaa ttattgacaa
      781 tatgaccata gccaagaggt tttccgtctg ccgtcttggc gtcacgcagc aaccccggcc
      841 gcaccagaag ggtgatgaga ttgccaaaca cccgtttcga cgggccatgt tcgaggcgct
      901 ggagccaatc cggcactttt aggcgatact ggtcaggcgt cagtttgggc gcgatcctgt
      961 gatcgacaat cgcccaaccg agaatgtaga cgagatagag aaaggtcagg aagaatcccg
     1021 gcagcatcgc cgcggcgtaa agtttgacga tcgactggcc ggcaacggcg gcataaacga
     1081 tcagcataac cgacggcgga atgagaatac cgagggtgcc gcccgcggta atcgcgccgg
     1141 ccgccaagcg cacatcgtag ccggcattga gcatcggccg catggcgata acgcccatca
     1201 aaacgacgac cgcgccgacg atgccggaag cgatgcccca gaaagcgcag acgagtaatg
     1261 ttgtaaccgc gagcgacgcc ggcacgcggc ggaatgccaa ctgcacgctg tgaaacatcc
     1321 ggtcgaccaa cgccgctcgc tccatgacgt aacccataaa aacaaacaac ggcaccgaca
     1381 gcagcgtgtc attgaccatg acgccgtagg tacgctggac catcaggtca aatattcggt
     1441 tctgccacca gtgttggctc gggtcccaga aggccagggc gccaaaaatc atcccaaggc
     1501 ccatgagtgt aaacgcggta gggaagccca tcatgatcgc gccgacgatg aggccgagca
     1561 tggtcaatcc gaggatcgga tcgctcatgg cttcttttct tcctcggcgt cagtgacgct
     1621 cactgcgctg cgatggcgcg ccgcgtcgtc ga
//
LOCUS       DATIRS010000497         1967 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1807286, whole genome shotgun sequence.
ACCESSION   DATIRS010000497 DATIRS010000000
VERSION     DATIRS010000497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1967)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1967)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1967
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1807286"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..308)
                     /locus_tag="VLM90_06280"
     CDS             complement(<1..308)
                     /locus_tag="VLM90_06280"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12603.1"
                     /translation="MATAEPQKKLAFAALHHKDFRSYFWTTALAMMADSIEHVISYWL
                     LYQKFHSPVLAGFAVLSHWTPFLLFAVYFGAMADRYDCRKVIQVAQIMYMSVSAAWAF
                     L"
     gene            complement(642..1922)
                     /locus_tag="VLM90_06285"
     CDS             complement(642..1922)
                     /locus_tag="VLM90_06285"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12604.1"
                     /translation="MDSRNPSISATATDSKPKVAFAALKHKDYRWFLIATMLAMMADN
                     IEHVISYWVLFQKFQSPVLAGFAVISHWTPFLLLSVYFGGLADRYDCRKLIQIAQIMY
                     MGVTAVWAVLFLTDTIQIWHACVLLVIHGIAGVFWTPAEILLIHDIVGGDDLPSAVRL
                     NATARQLGILFGPAVGGAMMLWLGAPAGLLINALIYVPFTVWLMLVPYTGHLREGAPA
                     RRGLRWRDAFGVLREVAQHRSIVTMIVLGGAASLFVGNAFQASMPEFAHDLGTDKADF
                     AYSALLAANAAGSVFGGFVLDGKQWVPPTVKAAIGCAIFWCLTMTVFAFSNSYPLSLT
                     LLFIAGALNLAFYSIAQTIVQLEAPMHLRGRLIGLFSMSAFGLRAFSGVTVGVIGGLI
                     GVHWSLALSSLVLLAVTLALFGFAQQCQTAVEPG"
BASE COUNT          521 a          569 c          541 g          336 t
ORIGIN      
        1 agaaacgccc aagccgccga cacactcatg tacatgatct gcgccacttg gatgaccttg
       61 cggcaatcgt agcggtccgc catggcaccg aagtaaaccg caaataacag gaaaggtgtc
      121 cagtggctga gcacggcgaa accggccagc acaggggagt ggaatttttg atagagcagc
      181 cagtaactga tcacatgctc gatactgtcg gccatcatcg ccagcgccgt ggtccaaaaa
      241 taactacgaa agtccttatg atgcagcgcc gcgaaggcaa gctttttttg cggttcagca
      301 gttgccaaga caatctccaa gactttttag attatctttc gacagtagcc aatatcgaat
      361 ggcgacgcaa acaaccgtta gattcgagat cgaagggctg aactcgccga ctcttttatt
      421 ccgtcattcc ggcggaggcc ggaatccaga tttcatatag ccgccacggc tattcaagaa
      481 acgaagatgg atgccggttt tcaccggcat gacaaatatc aggctcttcg cctgaaagag
      541 aacgatttag acaaccctga gaaatgaatc gaactgtcaa aaaccgggga acgctaagca
      601 atttttgatg gaacattggc cgatgaattt gaccatccca ttcacccagg ctccaccgcc
      661 gtctggcact gctgggcgaa gccgaacaac gccaaggtca cggcgagcag gacaagcgag
      721 ctcagcgcca gcgaccagtg cacgccgatc agtccgccga taaccccgac ggtgacaccg
      781 ctaaaggccc gcagaccgaa cgccgacatc gagaacaaac cgatcaagcg gccgcgcaag
      841 tgcatcggcg cttccagttg cacgatggtt tgggcgatgg agtaaaaagc gagattcaac
      901 gcgccagcga taaacaacaa cgtcaatgac agcggatagc tgttggaaaa ggcgaacacc
      961 gtcatcgtca gacaccaaaa aatcgcgcag ccgatcgccg ctttcaccgt cggcggcacc
     1021 cactgcttgc cgtcgaggac aaacccgccg aacaccgaac cggcggcatt ggcggcgagc
     1081 agcgcgctgt aggcgaagtc ggccttgtcg gtgccgagat catgggcgaa ctccggcatg
     1141 ctcgcttgga aagcattgcc gacaaacaac gacgccgcgc cgccaagaac gatcatcgtc
     1201 acgatggagc ggtgttgcgc gacctcacgc agcacgccaa aggcgtcgcg ccatctcagc
     1261 ccgcggcgcg ccggcgcgcc ctcgcgcaag tggccagtgt aagggacgag catcaaccag
     1321 accgtaaacg gcacgtagat gagcgcgttg atcaatagac ccgccggcgc acctaaccac
     1381 aacatcattg cgccgcccac cgccggaccg aaaagaatgc caagctggcg cgcggtggcg
     1441 ttaagcctga ctgcgctcgg caaatcatcg ccgccaacga tatcgtgaat caggagaatc
     1501 tcggccggag tccagaacac cccggcaatg ccgtgaatga cgagaagaac gcaggcgtgc
     1561 cagatttgaa tcgtgtcggt caaaaacaag actgcccaca cggcggtcac gcccatgtac
     1621 atgatttgcg cgatttgaat cagcttgcgg cagtcgtacc ggtcggccaa gccgccgaaa
     1681 tagaccgaca gcaggagaaa cggcgtccaa tggctgatga cggcgaaccc ggcaagcacc
     1741 ggcgactgaa acttttggaa caaaacccaa tagctgatca catgctcgat gttgtcggcc
     1801 atcatggcga gcatggtggc gataagaaac caacggtagt ctttatgctt tagcgccgcg
     1861 aaggcaactt tcggcttcga gtcggtcgca gttgccgaga tacttgggtt gcgtgagtcc
     1921 aatgcggtgt ccaacgagcc aacggtagat tttcaactta acggaaa
//
LOCUS       DATIRS010000498         2428 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_627417, whole genome shotgun sequence.
ACCESSION   DATIRS010000498 DATIRS010000000
VERSION     DATIRS010000498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2428)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2428)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2428
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_627417"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            317..2002
                     /gene="ettA"
                     /locus_tag="VLM90_06290"
     CDS             317..2002
                     /gene="ettA"
                     /locus_tag="VLM90_06290"
                     /inference="COORDINATES: protein motif:HMM:NF008775.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HSQ12605.1"
                     /translation="MATTEPNKIIYSMVGVGKNYDKRAVLKDIYLSYFYGAKIGVIGL
                     NGSGKSSLLRIMAGVDKEFNGEAVLSPGYTVGFLQQEPLIDDARTVREVVEEAVQDTV
                     NLLKEFEAINAKFAEEMSDDDMNKLLERQGEVQEQLDHLDAWDLDARLEMAMDALRCP
                     PSDTPVKILSGGERRRVALCRLLLQKPDILLLDEPTNHLDAESVAWLEHHLQNYAGTI
                     IAVTHDRYFLDNVAGWILELDRGQGIPFKGNYTSWLEQKQERLRQQEKSESERQKTLA
                     RELEWIRMSAKARQAKGKARITAYEDLLGQESQKRRDDLEIPIPPGPRLGNVVIEAEK
                     VSKAYGDNLLVDGMTFKLPPGGIVGVIGPNGAGKTTLFRMITGQEKPDSGKIRIGETV
                     VLAYVDQSRTLDPNKNIWEEISGGADLLKIGSREVNSRAYVARFNFSGTDQQKKVGSL
                     SGGERNRVHLAKMLKEGANVILLDEPTNDLDVNTLRALEEALENFAGCALVISHDRWF
                     LDRIATHILAFEGDSKVTWFDGNYSDYEADRKARMGDDAERPHRIKYRQLTRA"
     gene            2106..>2428
                     /locus_tag="VLM90_06295"
     CDS             2106..>2428
                     /locus_tag="VLM90_06295"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12606.1"
                     /translation="MSDETPGAPPADAEVKAAQPHGMLGFLGALHIFDALHYREYRLI
                     WFGQIFASMATWMDQVARGWLLYELTNSTLQLGLIRGVQAIPILLLSPLAGSAADRYS
                     RKNQIL"
BASE COUNT          548 a          759 c          681 g          440 t
ORIGIN      
        1 gactatgacc ggtccgttcg gtccctcgat gagccagaat atatatgcca ccggttggtc
       61 gcggtccgca tcactgcgca aacacggcat gattcccgaa cgccaccagc tctcgctcat
      121 ccccaccatc agcgcgtgaa ccgaatgatt taccgccata ctcaagctcc tctctgcata
      181 tctggcagac agcataaccc tggcccggaa attcggtcaa cctcaatttc gcgattcatt
      241 cgctttgttg cagaaccaaa gccaacctga caatctaacg gtagcaaaat tcactcagag
      301 gttaacgttt ttatccatgg ctaccactga acccaataaa attatctact cgatggtcgg
      361 cgtcggcaag aattacgaca agcgcgccgt gctcaaagac atttatcttt cctatttcta
      421 cggcgccaag atcggcgtca tcggtttgaa cggctcgggc aagtcgtcgc tgttgcgcat
      481 catggccggc gtcgacaagg agttcaacgg cgaagccgtg ctgtcgccgg gctataccgt
      541 cggcttcctc cagcaggagc ctctgatcga cgacgcacgc accgtgcgcg aggtggtcga
      601 agaagcggtg caggacaccg tcaacctgtt aaaggaattc gaagcgatca acgccaagtt
      661 cgccgaggaa atgtccgacg acgacatgaa caaactgctc gagcgccagg gcgaggtgca
      721 ggagcagctc gaccatctgg atgcctggga cctcgacgcg cgcttggaga tggcgatgga
      781 tgcgctgcgc tgcccgccgt cggacacgcc ggtgaaaatc ttatccggcg gcgagcgccg
      841 ccgcgtcgcg ctatgccgct tgctgttgca gaagccggac attctgctgc tcgacgagcc
      901 gactaaccat ctcgacgccg aatcggtggc ctggctcgaa catcacctgc agaattatgc
      961 cggcacgatc atcgcggtta cccatgaccg ctatttcctc gacaacgtcg ccggctggat
     1021 actcgagctc gaccgcggcc agggtatccc gttcaaaggc aactacacgt cgtggctgga
     1081 gcagaaacag gaacggctgc gccaacagga aaaatccgaa agcgaacggc agaagacatt
     1141 ggcgcgcgaa ctcgagtgga ttcgcatgtc ggccaaagcg cgccaagcca agggcaaagc
     1201 gcgcatcacc gcctacgagg atctgctcgg ccaggaatcg caaaagcggc gcgacgatct
     1261 agaaatcccg attccgcccg gcccgcgcct gggcaatgtc gtcatcgaag cggaaaaggt
     1321 cagcaaagcc tacggcgata acctgttagt cgatggcatg actttcaagc tgccgccggg
     1381 cggcatcgtc ggcgtcatcg gccccaatgg cgccggcaaa acgacgctgt tccgcatgat
     1441 taccgggcaa gagaaacccg atagcggcaa aatccgcatc ggcgaaaccg tagtgctggc
     1501 ctatgtcgat caaagccgca ccctcgatcc gaataaaaac atctgggaag aaatttccgg
     1561 cggcgcggat ttgctgaaga tcggcagccg cgaggtcaac tcgcgcgcct atgtggcgcg
     1621 cttcaatttc tccggcaccg accagcaaaa aaaagtcggc agcctatccg gcggcgaacg
     1681 caaccgcgtg catttggcaa aaatgttgaa ggaaggcgcc aacgtcatcc tgctcgacga
     1741 accgaccaac gacctggacg tcaataccct gcgcgcgctg gaagaagcgc tggaaaactt
     1801 cgccggctgc gccttggtga tctcccatga ccgctggttt ctcgaccgca tcgccaccca
     1861 catcctcgcc ttcgagggcg acagcaaagt gacctggttc gacggcaatt attccgacta
     1921 cgaagccgat cgcaaagcgc gcatgggcga cgacgccgaa cggccgcacc gcatcaagta
     1981 tcgccagttg acccgggcct aaatgatgat aatcggccat cgacggtgcg gcccatgaag
     2041 cttggcgcgc tcaatgccgc tggaccgcgg tctagcggca gtttcgccgg attaggactc
     2101 ccgccatgag cgacgaaacg ccgggtgcgc cgccggccga tgcagaggtc aaagccgccc
     2161 agccgcacgg catgcttggc ttcctcggtg ctttgcacat cttcgacgcg ctgcattacc
     2221 gcgaataccg cttgatctgg ttcggccaga tcttcgcgtc gatggccacc tggatggatc
     2281 aagtggcgcg cggctggttg ctctacgaac tgaccaactc gacgctccag ttggggctca
     2341 tccgcggcgt ccaagcgatc ccgattctac tgctctcgcc cctggctggg agcgcggcgg
     2401 accgttactc gcgcaaaaat cagatcct
//
LOCUS       DATIRS010000499         3061 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1020822, whole genome shotgun sequence.
ACCESSION   DATIRS010000499 DATIRS010000000
VERSION     DATIRS010000499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3061
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1020822"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..873
                     /locus_tag="VLM90_06300"
     CDS             <1..873
                     /locus_tag="VLM90_06300"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ12607.1"
                     /translation="FFVLLGPSGSGKTTLLRSVAGLEKPDSGEISLDDKMVFSSSRRI
                     SEPPEARGIGMVFQSYAIWPHLTVAENIGLVLTHGRSRLSKSEAQNRIRHALSLVQLD
                     DFENRPARLLSGGQQQRVALARALAVNPALLLMDEPLSNLDARLREEVRTNIKKLATR
                     LGITALYVTHDQVEAMVLADRIAVMAHGEILQIGNPFELYRAPANSQIAEFCGSSIKS
                     SPGLTAKARASATRCCCPPLNKRAGRFSKSSNCTKLSAWRIRVCASLLDRRERPWVST
                     KPIFSATVRWGQIA"
     gene            886..1101
                     /locus_tag="VLM90_06305"
     CDS             886..1101
                     /locus_tag="VLM90_06305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12608.1"
                     /translation="MPMPRASGGSEIRRLLEKTILSSSEISPLSGFSKPATLRNSVVF
                     PDPLGPSSTKNSPRFTSRSMPCNAATA"
     gene            complement(1142..2845)
                     /locus_tag="VLM90_06310"
     CDS             complement(1142..2845)
                     /locus_tag="VLM90_06310"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSQ12609.1"
                     /translation="MKGRWLFVAVSVASLLPVLAFLLIIFWMGFWQGSPGDPVVYTLK
                     HYRELFTDGSTYRTLLNTLGFATTTVLIALFFAVPMAWLVERTDLPGKNLIFALATIG
                     ALVPTFFTSMGWVFLLHPRIGIINKFLMELLGLAQAPFNIASLVGMGWVEGLGLSSIA
                     FIMIVATYRSMDPALEEAARVHGLGILRTLRYVTLPLTFPGIIAAAIYIFTIGLSAFE
                     VQAIIGMSNKIFTFSTFIFYKIQPQEELPSYGMAGAVSSLLVVLALLLSWGYFRTLKF
                     SHRYAVVTGKGYRPRLVELGRRGWILAWLFLGGYFTVAKLLPFLLLVWASLLRYFQPP
                     SWAALEQVSLRNFYALPWNLLFQGAWNTVVLMLTVPTLTLVLCLAISWTVLRSGLKWR
                     VSFDAVAFLPHAVPNLILAIAAVFASLFLLRDVVSLYGSLAIVIIVYTISRISFATRI
                     INNSLAQIHPELEEAAFIGGLPLWQVMRKILLPLLRPALVYAWLWMALLCFRELTMAS
                     VLVTSQANVTLPMIVWGLWLGGSLNQAAAANLVVLAFMLPAVILYLYFARRSRFSEAS
                     S"
BASE COUNT          744 a          910 c          880 g          527 t
ORIGIN      
        1 ttcttcgtgc tgctcgggcc gagcggatcg gggaagacga cgttgttgcg cagcgtcgcc
       61 ggtttggaaa agcccgatag cggcgagatc tcactcgatg acaagatggt tttctccagc
      121 agccggcgga tctcggaacc gccggaagcg cgcggcatcg gcatggtgtt tcagtcgtat
      181 gcgatttggc cccatctcac cgtcgccgag aatatcggct tggtgctgac ccatggccga
      241 tcgcggctaa gtaagagcga ggcgcaaaac cggatacgcc acgcgctcag cctggtgcaa
      301 ttggacgact tcgagaaccg gccggcgcgc ttgttgagcg gcggacagca gcagcgtgtc
      361 gcgctggcgc gcgctttggc ggttaatccg gcgctacttt tgatggacga gccgctgagc
      421 aatttggacg cgcgtttgcg cgaagaagtg cgcaccaata tcaaaaaact tgccacccga
      481 ttgggcatta ccgcgctcta tgtaactcac gatcaagtcg aggcgatggt gctggccgat
      541 cgtatcgcgg tgatggccca tggcgagatt ttgcagatcg gcaacccatt cgagctctac
      601 cgggcgccgg cgaattcgca gatcgccgag ttctgcggct cgtccatcaa aagtagcccc
      661 ggattgaccg ccaaagcgcg cgccagcgcg acacgctgct gctgtccgcc gctcaacaag
      721 cgcgccggcc ggttctcgaa atcgtccaat tgcaccaagc tgagcgcgtg gcgtatccgg
      781 gtttgcgcct cgctcttgga cagacgcgag cggccatggg tcagtaccaa gccgatattc
      841 tcggcgacgg tgagatgggg ccaaatcgca taagactgaa acaccatgcc gatgccgcgc
      901 gcttccggcg gttccgagat acgccggctg ctggagaaaa ccatcttgtc atcgagtgag
      961 atctcgccgc tatcgggttt ttccaagccg gcgacgctgc gcaatagcgt cgtcttcccc
     1021 gatccactgg gtccgagcag cacgaagaac tcgccgcgct tcacttcgag atcgatgcct
     1081 tgcaacgccg ccacggcgtg atcccccgat tgaaaattct tgcgcaagcc ggtgatcgaa
     1141 atcaagatga cgcctccgag aagcggctgc gccgggcgaa ataaagatag agaatcaccg
     1201 ccggcagcat gaaggcgagc acaacgaggt tcgccgcggc cgcttgattg agactgccgc
     1261 ccagccacaa gccccaaaca atcatcggca aggtgacgtt cgcctggctg gtcaccaaca
     1321 ccgaagccat ggtcagctcg cgaaaacaca acagcgccat ccacaaccag gcgtaaacca
     1381 acgccggccg gagcagcggc aagaggatct tgcgcattac ctgccagagc ggcaggccgc
     1441 cgataaacgc cgcttcttcc agctcgggat gaatctgcgc cagcgagtta ttgatgatgc
     1501 gagtggcgaa gctgatccgg ctgatggtgt agacaataat aacaatcgcc aagctgccgt
     1561 agagcgaaac cacatcgcgc aataggaata gggaggcgaa caccgcggcg atggcgagga
     1621 tcaaattcgg cacggcgtgg ggcagaaacg ccacggcatc gaagctgacg cgccatttga
     1681 gtcccgagcg cagcacggtc caggaaatcg ccaagcataa aactaacgtc agggtcggca
     1741 ccgtcaacat tagcaccacg gtattccaag cgccttggaa aagcagattc cacggcaagg
     1801 cgtaaaaatt tctcagcgac acttgctcca atgccgccca agaaggcggc tggaaatagc
     1861 gcaacagcga cgcccagacc agcaggagaa acggcagcaa cttggcgacg gtaaaataac
     1921 cgccgagaaa cagccaggcg agaatccaac cgcgccggcc caactccacc agccgcggcc
     1981 gatagccctt gccggtcacc acggcgtaac gatgggaaaa ttttagcgtg cgaaaatagc
     2041 cccagctcag gagcagcgcc aaaaccacca ataagctgct caccgcgccg gccatgccgt
     2101 agctcggcag ctcttcctgc ggttggattt tgtaaaagat aaaagttgaa aaagtaaaaa
     2161 tcttattcga catgccgatg atcgcctgca cttcgaatgc cgacagaccg atagtgaaaa
     2221 tataaatcgc cgcggcgatg atgccgggga aagtcagcgg cagcgtgaca tagcgcaagg
     2281 tgcgcaggat gcccaagcca tgcacccgcg ccgcttcttc cagcgccggg tccatgctgc
     2341 gataggtcgc gacgatcatg atgaaggcga tggacgagag ccctaagccc tcgacccaac
     2401 ccatgccgac cagcgaggcg atgttgaacg gcgcctgcgc caaaccgagc agctccatga
     2461 gaaatttatt gatgatgccg atgcgcggat ggagcaagaa cacccaaccc atcgaggtga
     2521 aaaacgtcgg caccaaagcg ccgatggtgg cgagagcgaa aatcaaattt ttgccgggca
     2581 aatccgtgcg ctcgactaac caagccatcg gcacggcgaa aaacagcgcg atcaagaccg
     2641 tcgtggtcgc gaagcctaag gtgttgagca gcgtgcgata ggtcgagccg tcggtgaaaa
     2701 gctcgcgata atgcttgagc gtgtaaacaa ccggatcgcc cggactgccc tgccagaatc
     2761 ccatccaaaa gataatcagc agaaacgcca gcaccggcag caggctcgcc accgacaccg
     2821 cgacaaacaa ccagcggcct ttcaagattg ggctccgaac agagagttgg agtgatggag
     2881 tactggtgtg ttgggtccgg aacccctcac tccattactc caccactcca ttactccaac
     2941 catctgtgtt tcagttcccc gccaatattt tctgacactt ctgccggatg cgcgagtgtt
     3001 cctcggcgtt cttaaagact tccgataccg aataggcggt gaatttgacg ccgcgctttt
     3061 c
//
LOCUS       DATIRS010000500         1648 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1807406, whole genome shotgun sequence.
ACCESSION   DATIRS010000500 DATIRS010000000
VERSION     DATIRS010000500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1648
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1807406"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(227..1585)
                     /locus_tag="VLM90_06315"
     CDS             complement(227..1585)
                     /locus_tag="VLM90_06315"
                     /inference="COORDINATES: protein motif:HMM:NF013086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSQ12610.1"
                     /translation="MPELDPVVSDILVIGAGGCGLMAALVAVKKGARVLLVEKTDKPG
                     GGTAFSSRGIRAAGSRRQRELKIADSPELYAQDILRRNNNESDPVLTERLAETSGRVA
                     DFLTDMAGIEFHIGEFAFGHGAQRSHSWKADKTITDFLFETVEREKNVQVRFSTPVLS
                     LQQETGGAVTGVVTKDGVLTARKFILASGGFGASAELLARYIPKELDIPFPGHYGSTG
                     DGIKMGLAVGAATENMGAFQPYPAYIGPGKRAVAPEVALSGGIMVDAGGNRFVDETRY
                     PGGLGIKMLELPGKQAYEIFDERIYRLHRNAPGLRNLSRYFDEGLLLKAETPEQLAGR
                     LAIDAEGLKRTIEQYNDSAASGGKDAFGRALPQPFQGPFYGIKVTVALYHTQGGLKVT
                     PDGQVLRADGSIIPNLYAGGGAAGGVSGKGLEGYLPGNGLLASLGLGMRAAEHAAASL
                     AK"
BASE COUNT          313 a          528 c          460 g          347 t
ORIGIN      
        1 gccgctaaca ccgtagggtt tttcataacc acacctcccg ctgtttccag ccgaatctgc
       61 accacggagt tcccaggttg agacagacat ttcaaaccag aggcgcggag agctcagagt
      121 tcggattatt tcttgatgaa gaactctttt ttcgcgcact ccgcgcgtcc gccgtaaaca
      181 tccgaagaga tcctgtccat cgtgatgata tcagaaacca gggatattat ttagcgagcg
      241 aggccgccgc gtgctccgcc gctctcatgc ctagacccag agaggcgagc aacccgttgc
      301 ccggtaaata accttccaaa cccttgccgg atacgccgcc ggccgctccg ccgccggcgt
      361 aaaggttggg gatgatcgaa ccgtcggcgc gcaagacctg gccgtccggg gttactttta
      421 atccgccttg tgtgtggtac agcgccaccg tgactttgat gccatagaag ggtccctgaa
      481 acggttgtgg cagcgcgcgt ccgaaagcgt ctttgccgcc gctggccgcg ctgtcgttat
      541 actgttcaat cgttcgcttc agcccttcgg cgtcgatggc caatctgcct gcgagttgtt
      601 ccggcgtctc ggccttgagc aaaagtccct catcgaagta gcgcgacaaa tttctcagtc
      661 ccggcgcgtt tcgatgcagc cgatagatac gctcgtcgaa gatctcgtag gcctgcttgc
      721 cgggcagctc aagcattttg atgccgagac cgccgggata acgggtctcg tcgacgaacc
      781 gattgccgcc ggcgtcgacc atgatgccgc cggatagagc cacctcgggc gccaccgcgc
      841 gttttcccgg accgatgtat gcggggtagg gctggaaggc gcccatgttt tccgtcgccg
      901 cgccgaccgc caaacccatc ttgatgccgt cgccggtgct gccgtagtga cctggaaaag
      961 gaatgtccag ctctttggga atgtagcggg ccaacaactc cgcgctcgcg ccgaagccgc
     1021 ccgaggcgag aataaatttt cgcgccgtga gcacgccatc ttttgtcacc acgcccgtta
     1081 ccgcgccgcc ggtttcctgt tggagcgaca ataccggcgt cgagaatcgc acctggacat
     1141 ttttctcccg ctcgactgtt tcgaagagaa aatcggtgat ggttttatcc gccttccacg
     1201 agtgcgatcg ctgcgcccca tgaccaaagg caaactcgcc gatgtgaaat tcgatccccg
     1261 ccatatcggt caggaaatcg gccacgcgcc cggaagtttc cgcgagccgc tcggtcagga
     1321 ctggatcgct ctcgttgttg ttccggcgca ggatatcctg ggcatagagt tccggactgt
     1381 cggcgatctt caactcgcgc tgccgccggc tgccggcggc gcggatgcct ctagaagaga
     1441 aagcggtccc gcctcccggt ttgtccgtct tctccaccag cagcacccgc gcgccctttt
     1501 tcaccgccac cagagcggcc atgagaccgc accctccggc accgatgacg aggatatcgc
     1561 tgactactgg atctaactcc ggcatcgaac ctccaagccg ctcggccaca atatttgata
     1621 gccgcccggg attgcaactt gtgttggc
//
LOCUS       DATIRS010000501         1660 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1610669, whole genome shotgun sequence.
ACCESSION   DATIRS010000501 DATIRS010000000
VERSION     DATIRS010000501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1660
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1610669"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..417)
                     /locus_tag="VLM90_06320"
     CDS             complement(<1..417)
                     /locus_tag="VLM90_06320"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12611.1"
                     /translation="MSRRVFSALLIFLAAFGLHSVELPAQSRPKIVIGHASMSSVVLT
                     LWAAQDKGFFAKNGIDAQMVFIPGSPTLIASLNTGDVHFGFTGGTATLGAAVAGLDVR
                     VLAAFADRVQSELVTRPEIKTAADLKGKRIGVTSIGG"
     gene            complement(813..>1660)
                     /locus_tag="VLM90_06325"
     CDS             complement(813..>1660)
                     /locus_tag="VLM90_06325"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12612.1"
                     /translation="QKRGFYSQENVKVELVLIGRTDGQLQALLSGEIHFGTLNADSVI
                     AIAEKGATLKVIAGVDNAAPYFLIGGKNYKKVEDLKGARLGVSSLRGGATSILLEYLK
                     SKGLFFPRDFILTVISGGTVSRLSALESGSIAGAVLGFPYSDIAVDQGFTRLGDTMEV
                     ISTYQFNGVTVNPAWAEKNRAGVVRFLKAHIRSLRWIHDHPDQAAELFTAEMAIKPPY
                     ARRGVDYFTKNKVFPIDGSVTVEGLKANIDIQFKDGVLKEPLPTPDRYADHSFVRQAQ
                     KELGL"
BASE COUNT          365 a          477 c          463 g          355 t
ORIGIN      
        1 gccgccgatg ctcgtgaccc cgatgcgctt ccccttgaga tcggcggcgg tcttgatctc
       61 gggcctggtc accagttcac tctgcacgcg gtcggcgaaa gcggcgagca ctctgacatc
      121 gagtcccgcc accgccgcgc ccaaggtcgc cgtgcctccg gtgaaaccaa aatgaacgtc
      181 gccggtattg agcgaggcga tcaaggtcgg tgaacctggg atgaaaacca tctgggcgtc
      241 aatgccgttc ttggcgaaaa agcctttgtc ctgtgccgcc catagggtca acaccaccga
      301 gctcatggag gcatggccga tgacgatttt aggacggctt tgcgccggca attcaactga
      361 gtgcagccca aatgcggcta gaaagatgag aagcgctgaa aaaactcgtc tggacatgat
      421 gatgaataac tcctaatttg ccggtgacta taaagctctc ttctcggata acaaaaccac
      481 cttgcgccgt caaacctata ttcccgaacg gttcgactcg gtatcagcta gaatgcaccg
      541 atcaggggag atttctcgct gcgctcgaaa tgacagtgca cggccacgga tggtcatccc
      601 gaacgaatgt catggatctc gtcctattac tggcgaatac attgcaccct cgagggcacg
      661 gtttccgcaa agtcaacggc gacaaacctt tgctgtggag acttcattcg gaagtgcgta
      721 tgccacacgc ccctacgccg aacgggacac ttctgatagc gattctatca aaagcgaaac
      781 ctgaatttcc gactttaatc gaatgaatcg aactacaatc ccaattcttt ttgcgcctgg
      841 cgcacaaaac tatggtcggc gtatcggtcc ggcgtcggta gcggctcctt gagcacgccg
      901 tctttgaatt ggatgtcgat gttggctttc agtccttcca cggtcaccga gccgtcgatg
      961 ggaaagactt tgttcttggt aaaataatcg acgccgcgcc gggcgtaggg cggcttgatg
     1021 gccatctcgg cagtgaatag ttcggcggct tggtccgggt gatcgtgaat ccaacgcagg
     1081 gagcgaatat gcgctttcaa aaagcgcact acgccggcgc gatttttctc ggcccaggcg
     1141 gggttcacgg taacgccatt gaactgatac gtggagatca cctccatggt gtcgcccaag
     1201 cgcgtgaacc cttggtcgac ggcgatgtcc gaatagggaa accccaacac cgccccggca
     1261 atcgaaccgc tttccaacgc gctcagccgg ctcacggtgc cgccggagat caccgtcaag
     1321 ataaaatccc gcggaaagaa cagccctttg ctcttgagat attcgagcag gatcgaggtc
     1381 gcgccgccgc gcaagcttga gaccccgagc cgcgcgccct tcaggtcttc gacctttttg
     1441 tagttcttgc cgccgatgag aaaataaggc gcagcgttgt cgacaccggc gatgaccttg
     1501 agggtggcgc ctttctcggc gatggcgatg acgctgtcgg cgttgagagt gccgaaatgg
     1561 atctcgccgc tgagcagcgc ttgcagttga ccatcggtgc ggccgatcag caccagctcg
     1621 actttgacgt tttcctgact gtaaaagccg cgcttttgac
//
LOCUS       DATIRS010000502         1884 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_233984, whole genome shotgun sequence.
ACCESSION   DATIRS010000502 DATIRS010000000
VERSION     DATIRS010000502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1884
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_233984"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..978
                     /gene="pnp"
                     /locus_tag="VLM90_06330"
     CDS             <1..978
                     /gene="pnp"
                     /locus_tag="VLM90_06330"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR03591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HSQ12613.1"
                     /translation="NFPPYSVGEVKFLRGPGRREIGHGNLAERALLPVLPVDQNFPYT
                     IRIVSEVLESNGSTSIASVCGGSLSMMDAGVPLKAAVAGIAMGLIKEGEHVRILSDIL
                     GDEDHLGDMDFKVAGTAEGVTSLQMDIKISGVNRAIMGQALRQAQEGRMHILGIMNQT
                     LSAGRSEVSGHAPRIITIHVKPEKIREIIGPGGKVIRGIIEATGVKMDVEDDGSVTIA
                     SSDEAAARKAIEMVQAITAEAEIGKIYRGTVRKVVEFGAFVEIMPGTDGLVHISQLAP
                     GRVNKVSDVLKEGDEVMVKVLEIDRQGKIRLSRKDALEELAGGAEAPRQ"
     gene            993..>1884
                     /locus_tag="VLM90_06335"
     CDS             993..>1884
                     /locus_tag="VLM90_06335"
                     /inference="COORDINATES: protein motif:HMM:NF012879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HSQ12614.1"
                     /translation="MFAKTVLDNGIRVVSHEMQDHRSVSLGIWVENGSRHESDAENGI
                     SHFIEHLLFKGTERRTAAQIAEEMDAVGGVINAFTSKEHTCYYAKVLDENLPLAIDLL
                     SDIFLHSSFDAEEIERERSVILQEISQAEDTPDDYVHDLFSVDFFKDHPIGRPICGRE
                     ATVNNFKREDFLNFFKARYQPRRVIVAAAGKIGHDALVKEMAARLGQVSDRGAAQGGP
                     LDGERKPEMGSGVYPHSKELEQAHICLGMAGIPQADPQRYPAYVLNTLLGGGMSSRLF
                     QEIREKRGKAYSVYSFSSSYI"
BASE COUNT          410 a          532 c          573 g          369 t
ORIGIN      
        1 aacttcccgc cgtatagcgt cggcgaagtg aaattcctgc gcggccccgg ccgacgtgag
       61 atcggccatg gcaatctcgc cgagcgggcg ctactccccg tgcttcccgt cgaccaaaac
      121 tttccttaca ctattcgcat agtttcagaa gttctagaat ccaacggttc gacctcgata
      181 gcgagcgtgt gtggcgggtc gttgtcgatg atggatgccg gtgtgccgtt gaaagcggcg
      241 gtggcgggca tcgccatggg cttgatcaag gaaggcgagc atgtccggat actttccgac
      301 atcctcggcg acgaagatca cttgggcgac atggatttta aagttgccgg cacggccgaa
      361 ggcgtgacct cgttgcagat ggatatcaag atcagcggtg tcaaccgcgc gatcatgggt
      421 caagcgctgc gtcaggctca agaaggccgc atgcatatcc tcggcatcat gaaccagacg
      481 ctgtcggcgg ggcggagcga ggtgtccggc cacgcgccac gcatcatcac gattcacgtc
      541 aagccggaaa agatccgcga aatcatcggt cccggcggca aagtcatccg cggcatcatt
      601 gaagccaccg gcgtcaagat ggatgttgaa gacgacggtt cggtgacgat cgcgtcgtcg
      661 gacgaagccg cggcgcgcaa agccatcgaa atggttcagg ccatcaccgc cgaagcggag
      721 atcggcaaaa tctacagggg cacggtgcgc aaggtcgtcg agttcggcgc cttcgtcgaa
      781 attatgccgg gcaccgatgg cttggtgcat atttcccaac tggcgcccgg gcgggtgaac
      841 aaagtgagcg acgtgctcaa agagggcgac gaagtcatgg tcaaagtctt ggagatcgat
      901 agacaaggca agattcgcct cagccgcaaa gacgcactcg aagagctggc cggcggcgcc
      961 gaagcgccgc ggcagtaagg tttcttactg ctatgtttgc gaagacggtt ctcgacaacg
     1021 gcatccgcgt ggtttcccac gagatgcagg accatcgttc ggtaagtctc ggcatctggg
     1081 tcgagaacgg ctcgcggcat gagagcgatg ccgagaacgg catctcccat ttcatcgagc
     1141 atttactctt caaaggcacc gagcgtcgca cggcggcgca gattgccgag gagatggacg
     1201 ccgtcggcgg cgtgatcaat gcttttacgt ccaaagagca tacctgttac tacgccaagg
     1261 ttctcgacga aaacctgccg ctggccatcg acctgctgag cgatattttt ctccattcaa
     1321 gtttcgatgc cgaggagatc gaacgcgaac gctcggtgat cctgcaagaa atctcccagg
     1381 cggaagacac cccggacgat tatgtccatg accttttcag tgtcgacttc tttaaagatc
     1441 atccgatcgg ccggccgatt tgcggccggg aagcgacggt taacaatttc aagcgtgaag
     1501 actttctgaa cttcttcaag gcgcgctatc agccgcgccg ggtgattgtc gcagcggccg
     1561 gcaaaatcgg ccatgatgca ttggtcaagg aaatggccgc cagactcggc caggtgagcg
     1621 atcgcggcgc cgcccagggc ggcccgctcg acggcgagcg caagccggag atgggcagcg
     1681 gcgtttatcc ccattcgaaa gaattggaac aggcccatat atgcttgggc atggccggta
     1741 ttccgcaagc cgatccgcag cgctatccgg cttacgtgct caacaccttg ctcggtggcg
     1801 gcatgagctc gcgcttgttc caagagatcc gcgagaagcg tggcaaagcc tactcggtgt
     1861 attctttctc gtcgtcctac atcg
//
LOCUS       DATIRS010000503         5607 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1904845, whole genome shotgun sequence.
ACCESSION   DATIRS010000503 DATIRS010000000
VERSION     DATIRS010000503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 5607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5607
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1904845"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(82..2373)
                     /locus_tag="VLM90_06340"
     CDS             complement(82..2373)
                     /locus_tag="VLM90_06340"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSQ12615.1"
                     /translation="MFSVGNNVQRIDGHEKVAGKAVYAGDLRLPGMAYGKVLRSPLPH
                     GRIRRIDASMAAALPGVLAVLKRDNLPVAANSFGAYVRDQQIIATDKVRYAGDMVAAV
                     AATQPSIAAQALTLIDVDYEELPAVFSIDDALKAGAPLVHEKLERRDPGYGRGASHII
                     HDDSNICLHFRHQRGDIAAGFKDADAIFEDTFYFPSAQHYPMEPHVCVAHFEGETLTV
                     WSATQSPFPVRQELARIFALPFSGVRVIVPAVGGGYGAKSGIKTEGIAACLSRLCGRP
                     VRLAFGAEETFKTICQPRAKMTLKTGVKKDGTFVARHCEIFLDGGAYANSGPSVTEKA
                     GYRAHGPYRIPHVLTNAYSVYTNTVPGGAFRGFGGPQVAYAYETHTDMIAQRMAIDPF
                     DLRMKNLLDRGESFSPGDTPIDCDLKAGLKNIAQAIGWDSHGSQVSNGPKRRGVGIAT
                     AMKDGGGTNKPANAAVKIFNDGSVLLSTGSVEVGQGMRTAFLQVVAEELSVPPAQVRV
                     AALDTHYTPFDKGTNASSATSIMGQAVLKAARDARRQLLEAAAAVMKAPAGEVRLENG
                     MALCGEERLSFREVMQRHFRESEGEIWGRGYFKIEKDQNVPLGFPSPFWEIGFGAAEV
                     EVDVETGAVKLLRYISLTDAGKMINPMQCEAQDEGAAVFGLGQALFEDLAYQDGQLLN
                     CSLIDYCMPRFIDLPGEFTTMIMEGGGGPGPYGAKGMGEGGILPVAPAIGNAVFAATG
                     TRIQSVPLTPDLVWRAMTKNGKA"
     gene            2524..3261
                     /locus_tag="VLM90_06345"
     CDS             2524..3261
                     /locus_tag="VLM90_06345"
                     /inference="COORDINATES: protein motif:HMM:NF015057.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12616.1"
                     /translation="MADHIKMTPQEAKQKAETIRKIILDTYHNEVKPSPFFTDLRAGT
                     LSRKRLQAWITNWYSFALEVNTGMATSYHQFVGFFKRHPDIENRIAQKIGEEFTTPAI
                     GGHARMLPILGKALGVTPEQMIECELIPEARGLVDFFVRSWIDIPLAECYAVHMEEEI
                     FGFISRDFRQSLPKYGITNEDMKYFRVHEEADLDEDHGGTNQAILEVALQEGYGNERA
                     GWPLEYCGKIAVQMIGNFYDGVYRRFA"
     gene            3405..4439
                     /locus_tag="VLM90_06350"
     CDS             3405..4439
                     /locus_tag="VLM90_06350"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSQ12617.1"
                     /translation="MDHPKEIDELNELLKPRWVSGLWNVDHAERPADPKTRVKAHLWK
                     WHDIYDSLVQAKNRISVTSGSVERRVIRLVNPGMAETEMTSHTILLSFQLIQPGEVAP
                     GHRHTMSAFRFILQGRGAYTNVDGHKMVMESGDLILTPHGCWHEHAHEGDENMVWIDG
                     LDVPFVQALQQISFDPYKQGRLPVNEAIDPATFYGMTRPVGNMNPEAPRVLHYHWSET
                     YASLQRLARTTGNAYDAVALEFVNPATGGATLPTMSCRVQLLRGSEKTKTHRHTSTSI
                     YHAFRGSGTTTINGQPFHWQKGDTFIVPLWSWHEHANGSSSDEAILFSMHDDPILRAF
                     GLYREEAGSN"
     gene            4451..5389
                     /locus_tag="VLM90_06355"
     CDS             4451..5389
                     /locus_tag="VLM90_06355"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HSQ12618.1"
                     /translation="MTKFGVFLPVSGRAASRKTLMQAAQEAEALGYDSVWAADRLVIP
                     WKIGTTYPYSKEATFIVPPDRPFFDTMTCLAFLAGCTETIQLGMSVMVLPYRHPLHWS
                     RIATTIDQLSTGRLILGVGVGWMEEEFAAMNAPFKERGKVSDEQLTLLKQLWSEEHIT
                     FHGKYYHVDDIAVLPKPYQKPRLPIWVGGEGKYAQRRAGQFGDAWFPYFVKVTPEQLA
                     AGYDNVRAEAKKAGRDPDEVQLACCLPVELTTSDGPQITDYLKGSIEQVKVRLQQFIA
                     VGCVHIGLQFMIPHYPERREQIERFANEALAELKLT"
BASE COUNT         1234 a         1698 c         1546 g         1129 t
ORIGIN      
        1 ggccgctttt ggattttgga ttccatgaca cttcgtcagc tattctacga tgagtgtgga
       61 gttgggcgta ccccttaccc cttacgcctt accgttcttc gtcatcgctc gccaaaccaa
      121 atccggcgtc agcggcacag actgtattcg agtgccggtc gcggcgaata ccgcgttgcc
      181 gatggccggt gccacaggaa gaatgccgcc ttcgcccatt cctttggcgc cgtaggggcc
      241 tgggccgccg ccgccttcca tgatcatggt ggtgaattcg ccgggcagat cgatgaaacg
      301 cggcatgcaa tagtcgatca agctgcagtt gagaagttgg ccatcttgat aggcgagatc
      361 ttcaaacaac gcttggccga ggccgaacac agccgcacct tcgtcctgcg cctcgcattg
      421 catcggattg atcatcttgc cggcgtcggt gagcgagatg tagcgcaaca acttcacggc
      481 gccggtctcg acgtccactt cgacttccgc cgcgccaaaa ccgatctccc aaaacggcga
      541 cggaaaaccg aggggcacgt tctggtcctt ttcgatcttg aaataacccc gcccccaaat
      601 ctccccttcc gattctctga agtgacgctg catcacttcg cgaaagctca aacgctcttc
      661 gccgcacagc gccatgccgt tttccagtcg cacttcgccg gccggcgctt tcattacggc
      721 ggccgccgct tcgagtaatt gccgccgcgc atcgcgcgct gccttgagca ccgcttggcc
      781 catgatcgat gtcgcgctgc tggcgttggt gcctttgtcg aagggtgtgt agtgggtgtc
      841 caaagcggcg acgcgcacct gcgccggcgg cacggacaac tcttcggcga cgacttgcag
      901 gaacgccgtg cgcatcccct gtcccacttc gaccgaaccg gtggacaaca gcacactgcc
      961 gtcgttgaag attttcaccg ccgcattggc cggcttgttg gttccgccgc catctttcat
     1021 cgccgtggcg atgccgacgc cgcgccgttt gggtccatta cttacttgac tgccgtggga
     1081 atcccaaccg atcgcctggg cgatgttttt caatccggcc ttgagatcgc agtcgatggg
     1141 cgtatcgccg ggagaaaagc tttcgccccg gtccaaaaga tttttcatgc gcaggtcgaa
     1201 gggatcgatc gccatgcgct gggcgatcat gtcggtatgg gtctcgtagg cgtaggccac
     1261 ctgcggcccg ccgaagccgc gaaatgcgcc gccggggacg gtgttagtat atacggaata
     1321 ggcattcgtc agcacatggg gaatccgata gggcccatgg gcgcggtagc cggctttttc
     1381 ggtcaccgac ggaccggagt tggcgtaggc gccgccatcg agaaaaatct cacagtggcg
     1441 cgcgacgaac gtgccgtcct tcttgacgcc ggtcttgagc gtcatcttgg cgcgcggctg
     1501 gcaaatggtt ttgaaagttt cctcggcgcc gaacgccaag cgtaccggcc ggccgcacag
     1561 gcgcgacaag caggcggcga tgccttcggt cttgatgccg ctcttggcgc cgtaaccgcc
     1621 gcccaccgcg ggcacgatga cacgcacgcc gctaaatggc agcgcgaaaa ttcgcgccaa
     1681 ctcttggcgc accggaaagg ggctctgggt tgccgaccac accgtcagcg tctcgccctc
     1741 gaaatgggca acgcagacat ggggttccat cggataatgc tgcgcgctgg gaaagtaaaa
     1801 ggtatcttca aagattgcgt cggcgtcttt aaatccggcg gcgatatcgc cgcgctggtg
     1861 gcgaaaatgc agacagatgt tgctgtcgtc gtggatgata tgcgaagcgc cgcggccata
     1921 gccagggtct cggcgctcga gcttttcatg caccaacggc gcgcccgcct tgagcgcgtc
     1981 gtcgatgctg aataccgccg gcaactcttc ataatcgacg tcgataagtg ttaatgcctg
     2041 ggccgcgatg cttggttgcg tcgccgccac cgcggcaacc atgtcgccgg cgtagcgtac
     2101 tttgtcggtg gcgatgatct gctggtcgcg cacgtaagcg ccgaaggaat tggccgcgac
     2161 cggcaaattg tcccgcttca gcaccgccag cacgcccggc agcgccgccg ccatgctggc
     2221 atcgatgcgc cgaatccgcc catgcggcag cgggctacgc aacaccttcc cataagccat
     2281 gcccggcagc cgcagatcgc cggcgtaaac ggccttcccg gcaacctttt catgaccgtc
     2341 aatgcgttga acgttgtttc ccactgagaa catggcgaga taccttgttt agaaaatcat
     2401 agttccatgg ttcgactaac tttcgcaaaa gcgatcccgg ccgacccaat cgttgacaac
     2461 aatcttggcc ttcggttaag tggccttgac gaatgaagtt tcatgacggg aaaggaatta
     2521 gccgtggctg accatatcaa aatgactccg caggaagcaa agcaaaaagc cgaaacgatc
     2581 cgcaaaatca tcctcgacac ctaccacaat gaagtgaagc cttcgccatt cttcaccgac
     2641 ctgagagccg gcacgctgtc gcgaaagcgg ctccaggcgt ggatcactaa ctggtacagc
     2701 ttcgccctcg aggtcaatac gggaatggcg acctcttacc accagttcgt cggttttttt
     2761 aagcgccatc ccgatataga aaatcgcatc gcccagaaga tcggcgaaga attcactacc
     2821 cccgccatcg gcggccatgc gcgcatgctg ccaatcctcg ggaaagcctt aggcgtcacg
     2881 ccggaacaaa tgatcgaatg cgaactgatt cccgaggcac gcggcctggt ggatttcttt
     2941 gttcgctctt ggatcgatat accgctcgcc gaatgttacg ccgtccatat ggaagaagaa
     3001 atattcggtt tcatctcccg cgacttcaga caaagcctgc ccaagtacgg cattaccaac
     3061 gaggatatga aatattttcg cgtgcacgag gaggccgatc tcgacgaaga tcatggcggc
     3121 accaaccagg cgatcttaga agtcgccctg caggaaggct acggcaacga gcgcgccggc
     3181 tggccattgg aatactgcgg caagatcgcc gtgcaaatga tcggcaactt ttatgacgga
     3241 gtatataggc gattcgccta ggaaataatt cgttcaaacc gctcaaccgc ttcgcttcgt
     3301 tcaagccgtt caaatcgttt cggatcaatc cggacttaac ctccgaaaac ggcttgaacg
     3361 ttttgaacgg cttgaacgat ttgaacatcc tcggaggtta agtaatggac caccccaaag
     3421 aaatcgacga gctcaacgaa ctcttgaaac cgcgttgggt gtctggcctg tggaatgtcg
     3481 atcatgccga gcggcccgcc gatccgaaga cgcgagtcaa agcccacctg tggaagtggc
     3541 acgatatcta cgacagcctg gttcaagcca aaaacaggat ttccgtcacc agcggcagcg
     3601 tcgagcggcg ggtgattcgc ttggtcaacc ccggcatggc cgagaccgag atgaccagcc
     3661 acacgatcct gttgtcattt cagttgatcc aacccggcga agtcgccccc ggccaccgtc
     3721 acaccatgtc ggcgttccgc ttcatcctcc agggccgcgg tgcctacacc aacgtcgacg
     3781 gccacaagat ggtgatggag tctggagatt tgattctcac gccgcacggc tgctggcatg
     3841 aacatgccca cgaaggcgac gagaacatgg tctggatcga cggcctcgac gtgccgttcg
     3901 ttcaagcgct gcaacagata tccttcgatc cctacaagca gggccgcttg ccggtcaacg
     3961 aagccatcga tccggcaacg ttctatggca tgacgcgtcc ggtcggcaac atgaatccgg
     4021 aggcaccgcg cgttctgcat tatcactgga gcgaaaccta cgcgtcattg caacgtttag
     4081 cgcgcacaac gggaaatgcg tacgacgccg tcgccctaga gttcgtcaat cccgccaccg
     4141 gcggcgcgac cttgccgacc atgtcatgcc gggttcaact gctgcgcggc agcgaaaaaa
     4201 ccaaaacgca tcgtcacacc agcaccagca tctaccacgc cttccgcggc agcggcacaa
     4261 cgaccatcaa cggccaaccc ttccactggc aaaaaggcga caccttcatc gtcccgctct
     4321 ggtcctggca cgaacacgcc aacggatcgt cgagcgacga ggcgattctg ttctcgatgc
     4381 atgatgatcc gatattgcgg gcatttgggt tgtatcgcga agaagccggt tcaaactaga
     4441 tggagaaata atgacgaagt tcggagtttt cctaccggta tccggccgcg ccgccagccg
     4501 taagactttg atgcaagcgg cgcaagaagc ggaagcgctg ggctacgatt cggtttgggc
     4561 cgcggaccgt ttggttatcc cgtggaaaat cggcacaacg tatccttata gcaaggaagc
     4621 gacgttcatt gtcccgcccg accggccgtt tttcgatacc atgacttgtc tggcattttt
     4681 ggccggctgc accgagacaa tccaattagg catgagcgtc atggtgctcc cctaccgcca
     4741 tccgctccac tggtcgcgca tcgccacgac catcgatcaa ttgtccaccg gccggttgat
     4801 tctcggcgtc ggcgtcggct ggatggagga agagtttgcc gccatgaatg cgccgttcaa
     4861 agaacgcggc aaggtttccg acgaacagtt gacgttgctc aagcagttgt ggagcgaaga
     4921 acacatcacc tttcacggca agtactatca cgtcgacgac atagcagttt tgcccaagcc
     4981 ctatcaaaag ccacggctgc cgatctgggt cggcggcgaa ggcaaatacg cccagcgccg
     5041 cgccggccag ttcggcgacg cctggtttcc ctatttcgtc aaagtcacac cagagcagtt
     5101 ggccgccggc tatgacaacg tccgcgccga ggcgaaaaaa gccggccgcg atccagatga
     5161 agtccaactc gcatgctgct taccggtcga gctgacaaca agcgacggcc cgcaaatcac
     5221 cgactatctc aaaggcagca ttgagcaggt caaagtaaga ttgcagcagt tcatcgccgt
     5281 cggctgcgtt cacatcggct tgcaattcat gatcccgcac taccccgaac gccgcgagca
     5341 gatcgaacgc ttcgccaacg aagccctggc ggagttaaag ttaacgtgat cgtggctcgt
     5401 gctcgtgctc gtgtagaatc cattcacaac gaaggtcacg aagagcacga agttcggaat
     5461 attaatcatc cgaacccttc atgtccttcg tgacttcgtg gtgaaaatat cctttgccag
     5521 ccaacgccac agcttgaact tcccacctga cgtggataaa aaataggatc ggtaaataga
     5581 tactgacaat cacaaagaag gaaggat
//
LOCUS       DATIRS010000504         1597 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_627745, whole genome shotgun sequence.
ACCESSION   DATIRS010000504 DATIRS010000000
VERSION     DATIRS010000504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1597)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1597)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1597
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_627745"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            147..>1597
                     /locus_tag="VLM90_06360"
     CDS             147..>1597
                     /locus_tag="VLM90_06360"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12619.1"
                     /translation="MAHDVVIKNGNVIDGSGSPAFQADVAIDGDKITAIGKDLGGGKK
                     EIDAKGHVVAPGFVDSHTHMDAFVVQYPNGNPVVNYGVTSIVIGDCGASCAPVPPKPE
                     PRKVLVEYLRRVLDKYVDDKDWRWNTFGEYLNYLEGKIAINCLPLMPHSPVRLTVMGE
                     AAYQRAANPEELNAMKAMVREGMELGAIGFSTSPRGGPAIHAGTPSTFAEHDEIIALA
                     NVAAEYWGCFQFNGFQMVLQPESGVPEMLTKIKTLQIGNEFRVRPGAKAAGMESIKYM
                     EEAQKRGQDIYGVVIPYQHIRRFNLDDCFLFNGLPTWESIKNSSDLKAKLSDKDTRRK
                     IEQERIACQGKLEFPEWHGWDRVVFEHLEKPELKKLEQKNMAEVARLTEKQPVDAFFD
                     IWIEDNFNSQILYHGLANAHPELLAEMIKSDTSLIGTDIGAHLDRFFWHGVPTKILGY
                     WRREKNLMSLEAAVHKVTGYPAQKLRLNRGLVR"
BASE COUNT          387 a          496 c          425 g          289 t
ORIGIN      
        1 gtctaccccg ctaatttgct catccgcttc cagaaaactc gaaactcata aaccgcacct
       61 cgaaaccgct tccgagcagt tgacaggcag tcactttcag tgggataagc aaagcatctg
      121 acagatccaa gggaggacag caaattatgg ctcatgatgt agtcatcaaa aacggcaacg
      181 tcatcgacgg cagcggcagt ccggctttcc aagcggatgt cgccatcgat ggcgataaga
      241 tcaccgccat cggcaaagat ctcggcggcg gcaaaaaaga aatcgacgcc aaagggcatg
      301 tggtcgcccc cggttttgtc gattcccaca cccatatgga cgccttcgtc gtccagtatc
      361 ccaacggcaa cccggtggtg aactacggcg tcaccagcat cgtcatcggc gattgcggcg
      421 cctcctgcgc gccggtgccg cccaaacccg agccgcgcaa agtcctggtc gaatacctgc
      481 gccgcgtgct cgacaagtat gtcgacgaca aagattggcg ctggaatacc tttggcgaat
      541 acttgaatta cctggaaggc aagatcgcca tcaactgtct gccgctcatg ccccactcac
      601 cggtgcgttt aaccgtcatg ggcgaggccg cctaccagcg tgccgccaat ccggaagaac
      661 tgaacgccat gaaggcgatg gtgcgcgaag gcatggaatt gggcgccatc ggtttctcca
      721 ccagcccgcg cggcggcccg gcgattcatg ccggcacccc cagcaccttt gccgagcatg
      781 acgagatcat cgcgctcgcc aacgtggccg ccgagtactg gggctgtttt cagttcaatg
      841 gcttccagat ggtcctccag ccggaatccg gcgtgcccga aatgttgacc aagatcaaaa
      901 cgctccagat tggcaatgaa tttcgtgtcc gtcccggcgc caaagccgcc ggcatggagt
      961 cgatcaaata catggaagag gcgcagaagc gcggccagga tatatacggc gtggtcattc
     1021 cgtaccaaca tattcgccgc ttcaatctcg acgactgctt cctgttcaac ggcctgccaa
     1081 cctgggagtc gatcaaaaat tccagcgatc tcaaagcgaa attgagcgac aaagacactc
     1141 gccgcaagat cgagcaagag cgcatcgcct gccaaggcaa gctcgagttc cccgaatggc
     1201 atggctggga ccgtgtcgta ttcgagcatc tggaaaaacc cgagctcaag aaactcgaac
     1261 aaaaaaacat ggccgaagtc gcccgcctca ccgaaaaaca gccggtggac gccttcttcg
     1321 acatctggat cgaggacaac ttcaactcac agatccttta tcatggcctc gccaacgcgc
     1381 atccggaact gctggccgaa atgatcaagt ccgacaccag cttgatcggc accgatatcg
     1441 gcgcgcatct cgatcgcttc ttctggcacg gcgtgccgac caagatcctg ggctactggc
     1501 gccgcgagaa aaatctcatg agcttagagg ccgcggtgca caaggtcacc ggctatccgg
     1561 cgcaaaagct gcgcctcaac cgcggcctgg tgcgcga
//
LOCUS       DATIRS010000505         3040 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_234454, whole genome shotgun sequence.
ACCESSION   DATIRS010000505 DATIRS010000000
VERSION     DATIRS010000505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3040
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234454"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..219)
                     /locus_tag="VLM90_06365"
     CDS             complement(<1..219)
                     /locus_tag="VLM90_06365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12620.1"
                     /translation="MRNKAQVEIFRSAKYRFQVLAVTLCFWFGVAHANPYIAKPGEAP
                     LRLRIATCAVSGGFMHLYAALENGLFNKY"
     gene            complement(238..1305)
                     /locus_tag="VLM90_06370"
     CDS             complement(238..1305)
                     /locus_tag="VLM90_06370"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12621.1"
                     /translation="MGLRLATIKRFNCYVGLRKLLIQPLALLSLPLIILSTAFAQVNP
                     YLARPSERSMTIRIATCAVSGGFAHLYTALENGLFDKYGFKMEHVFIRGSGPALAALM
                     ADEIQFLYCAADATLPSLAAGIDVKLVAAPLVKLPYVLVTRKEIRRMEDLKGKALGVA
                     RAGDLSDRLSRAMVKRFNVADVIMRPVGGSQNERYQAMAANLVQGVVITPPIDVRAKN
                     DGYNVLYRLIDLDIPFIYSSVHVTSRTMRDRPEMVQRLVAAFAEAIHYVDKNPVKTKS
                     AIAKIMRTKDDEALQVSYNVYTKDIVDRRMIVPGQAVNDSLELYRSLGTPIKRKAEDI
                     YDNSFVNHLEQSGFKKELWGR"
     gene            complement(1598..>3040)
                     /locus_tag="VLM90_06375"
     CDS             complement(1598..>3040)
                     /locus_tag="VLM90_06375"
                     /inference="COORDINATES: protein motif:HMM:TIGR02037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HSQ12622.1"
                     /translation="RFRMTPFMGACAIAVLAGMGGVSIIEYYQGGRQPAHAASSPVAP
                     AQSLPDFISLAKKLGPSVVNVSTSRIRGAAQEAPSPFGGNDPGEEFWQRFFGGRTPRG
                     PQRQSGVGSGFIVDGNGTILTNYHVVDGAQKLSVTLSDGKNYDAKVVGKDQKSDIAVI
                     KIEAGRDLPAAALGDSDRLEVGEWVMAIGNPFGLDHTVTSGIVSAKGRNIGQGPYDNF
                     IQTDASINPGNSGGPLLNLRGEVVGINTAIFSQSGGNIGIGFAIPSNSVKELLPQLRD
                     KGKVVRGFIGVSVQKVSPEIAESLGINPARGALVADLVKGGPAERAGMKTGDVIIEFD
                     RRPIKDSADLPQQVARVVPGAAVQIKVIRDGRETALSLTIGEMKEAEVTAAEQEGELG
                     LTVQQLTPQLAETLGLERGAGLVISAVKPGSAAEEAGLRTGDVLVEINRRPVKNLADY
                     NREIAGNDKAKSVLFLVRRGQSSLFLALKR"
BASE COUNT          646 a          889 c          855 g          650 t
ORIGIN      
        1 gtatttgtta aacagcccgt tctccagcgc cgcgtagaga tgcataaagc cgccggagac
       61 tgcgcaagtg gcgatgcgca agcgcagcgg tgcttcgccg ggcttggcaa tataaggatt
      121 agcgtgggca accccaaacc agaaacaaag cgtaaccgcc aagacttgga agcgatactt
      181 ggcggaacgg aaaatttcga cttgcgcctt attcctcatc cctgactcct gaccgcctta
      241 tcggccccaa agctctttct taaagccgct ttgctccaag tgattgacga agctattatc
      301 gtaaatatct tcggccttgc gtttaatcgg tgtgcccaac gaacgataga gttcaagcga
      361 gtcgttcaca gcttgccccg gcacgatcat gcgccggtcg acaatgtctt tggtatagac
      421 attatacgac acctgtaaag cttcgtcgtc tttcgtacgc atgattttgg caatggcaga
      481 tttagttttg accggattct tatcgacgta atgtatcgct tcggcaaatg ccgcgaccag
      541 gcgctggacc atttcgggcc ggtcgcgcat ggtgcgcgag gtcacatgta cggaactgta
      601 aataaacgga atatccaagt cgatcaggcg gtacagcacg ttgtaaccgt catttttagc
      661 gcgcacatcg atgggcgggg tgatgacgac gccttgcacc aggttcgccg ccatcgcctg
      721 gtaacgctca ttttgactgc cgccgacagg ccgcatgata acgtcggcaa cattaaaacg
      781 cttgaccatg gcacgcgaca accggtcgct caaatcgccg gcccttgcca cgcccagcgc
      841 tttgcctttg agatcctcca tgcggcggat ctccttgcgt gtgaccaaga cgtagggcaa
      901 tttaaccaac ggcgcggcaa ccaacttaac gtcgatgccg gccgccagcg atggcagcgt
      961 cgcatcggcg gcgcagtaga gaaattggat ctcgtcggcc atcagcgcgg ccagtgccgg
     1021 cccactgccg cggataaaca catgctccat tttgaatccg tatttgtcga aaagaccgtt
     1081 ttccagcgcg gtatagaggt gagcgaaccc gccggacacg gcacaagtcg cgatgcggat
     1141 ggtcatggac cgttcgctgg gacgggcgag ataaggatta acctgggcga acgcggtgct
     1201 gagaataatg agaggcagcg agagcagcgc caatggctga attagtaatt tgcgcaatcc
     1261 gacataacaa ttgaaacgtt tgatcgttgc caaccgcaga cccatttagg agacctcgct
     1321 tgaaacttaa tccggctacc ccgcagtggc ggatattaga tgattctcgc tggttgctca
     1381 atctacaaaa cggcatattc atcgcgcaat acttttgggc tctgaggaca accgggggtg
     1441 acttgacggc gcagctggcg gtcgatggcc gcgccagagc tagatcaaat ggacttggaa
     1501 agacgcttta ttagcgggaa aaagtaaaaa aaccgctcac ttgccgggag gctgctggga
     1561 ggcatggcaa gctgagcggt ttccaccggc cgcagggtca gcgcttcaat gccaggaaca
     1621 aactgctctg accgcggcgc accaaaaaca ggactgattt agctttatcg ttgccggcga
     1681 tctcgcgatt gtagtcggcg agatttttca ccggccggcg attgatctcg accagcacat
     1741 caccggtgcg taagcccgct tcttccgcgg cgctccccgg tttcaccgcc gagatgacca
     1801 agccggcacc ccgctctaaa ccgagggttt cggccagttg tggagtcagc tgctggacgg
     1861 tcaagccgag ttcgccctcc tgctcggcgg cagtgacttc ggcttccttc atctcgccga
     1921 tggtcagcga cagtgcggtt tccctgccat cgcgaatcac tttgatttgc accgctgcac
     1981 ccggcaccac tcgcgccact tgctgcggca ggtcggccga gtctttgatc ggccggcggt
     2041 cgaactcgat gatgacatcg ccggttttca tcccggcgcg ctccgccggt ccgcctttga
     2101 ccaggtcggc gaccaaggcg ccacgcgccg gattgatgcc caaggattcg gcaatttcag
     2161 ggctgacctt ttgcaccgac acaccaatga agccacgcac gactttgccc ttatcccgta
     2221 actgcggcaa cagttctttg acggagttgg atggaatggc gaagccgatg ccgatattgc
     2281 cgccggactg actaaagatc gcggtgttga tgcccacgac ttcgccgcgc agattgagca
     2341 gcgggccacc cgagttaccc ggattgatcg aggcatcggt ctgaataaag ttgtcgtacg
     2401 gcccctggcc gatattgcgc cccttggcgc tgacgatacc ggaagtaacc gtgtgatcga
     2461 ggccgaatgg attgccgatc gccatgaccc actcgccgac ttcgagtcgg tccgagtcgc
     2521 cgagagctgc cgcgggtaag tcgcgaccag cttcgatctt gatcaccgcg atgtcgctct
     2581 tttggtcctt accgactact ttcgcgtcat agttcttgcc gtcagacagt gtcacgctaa
     2641 gtttttgcgc gccgtcgaca acatggtagt tggtcaaaat cgtgccgttg ccgtcgacga
     2701 tgaagcccga accgacgccg ctttgacgct gtggcccgcg gggtgtgcgc ccgccaaaga
     2761 atcgctgcca gaactcttcc ccgggatcgt taccaccaaa cggtgagggt gcttcctgcg
     2821 ccgcgccgcg gattctgctg gtcgacacgt tcaccaccga aggtcccagt ttctttgcca
     2881 agctgatgaa gtctggtaaa ctctgcgccg gcgcaaccgg actgcttgcg gcatgggccg
     2941 gctggcgacc accttgatag tattcgatga tgcttacccc tcccatgccc gccaagacgg
     3001 cgatcgcaca ggcacccatg aagggggtca ttctgaaacg
//
LOCUS       DATIRS010000506         1751 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1611523, whole genome shotgun sequence.
ACCESSION   DATIRS010000506 DATIRS010000000
VERSION     DATIRS010000506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1751)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1751)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1751
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1611523"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1300
                     /gene="malQ"
                     /locus_tag="VLM90_06380"
     CDS             <1..1300
                     /gene="malQ"
                     /locus_tag="VLM90_06380"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: protein motif:HMM:TIGR00217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004134 - 4-alpha-glucanotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0005980 - glycogen catabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HSQ12623.1"
                     /translation="LIKDLNQWRAAPLVKYREVMARKREILNTLLRAVLQNSAQRRGD
                     FENFIASHPVAQDYAEFRAKTEREQKIWIDWPMDSREGKLHGSDFDDFAKRYHLYVQW
                     QCAEQIAAVSANARRGSAALYLDFPLGVNRDGYDVWRERSLFALGMNGGAPPDGLFIR
                     GQNWGFPPLHPEAIRQQGYRYYIDCLRHHMGSAGMLRIDHVMGMHRVFWVPDGFSATD
                     GAYVHYRAPEFYAILNFESHRHRVQIVGENLGTVPDAVTAAMAQRKFLGMHVGQFGVN
                     ADPNHALDAVPANVVASLNTHDTATFMGFWQEKDIDDSVDLNLLDSDQADTQRRYRAT
                     QRDALVAYLRAHDYIGADNSAAAVLRGWLIFLAGQPTEFILLNLEDLWLEPAPQNVPG
                     TWQERPNWQRKAQYSIEELRGLASINDVLTTISDIRARMV"
     gene            1311..1622
                     /locus_tag="VLM90_06385"
     CDS             1311..1622
                     /locus_tag="VLM90_06385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12624.1"
                     /translation="MSEVRPFSRLTAHDRYLFNQGSHYRLYDKLGARVVAVGRTCGSY
                     FAVWAPNAEPVSVASMLYLDYGRKNGERVPKRHGGENLETIEPLRRLNHVIYENSGCA
                     T"
BASE COUNT          374 a          534 c          491 g          352 t
ORIGIN      
        1 cttaatcaag gacttgaatc aatggcgcgc cgcgccgctg gtgaaatatc gtgaagttat
       61 ggcgcgcaaa cgtgagatcc taaacacttt gctgcgcgct gtattgcaaa attcggcgca
      121 gcggcgcggc gattttgaaa atttcatcgc cagccatccg gtagcgcaag actacgccga
      181 gtttcgcgcc aagactgagc gcgaacagaa aatctggatt gactggccca tggacagccg
      241 tgaaggtaaa ttgcacggct ccgacttcga cgacttcgcc aagcgctatc atctctatgt
      301 ccaatggcag tgcgccgaac aaatcgccgc ggtcagcgcc aacgcgcgcc gcggcagcgc
      361 ggcgctctat ttagactttc cactcggcgt caaccgcgat ggttacgatg tttggcgcga
      421 gcgaagcctc ttcgccctcg gcatgaacgg cggcgcgccc ccggatggat tgtttatcag
      481 agggcagaac tggggctttc caccgctcca tcccgaagcg atccgccagc aggggtaccg
      541 ttactacatc gattgcctgc gccatcatat gggttcggcc ggcatgctgc gtatcgatca
      601 tgtgatggga atgcatcgcg tcttttgggt gcccgatggt tttagcgcca ccgacggtgc
      661 ctacgtgcac tatcgcgcgc cggagtttta cgcgattttg aatttcgagt cgcaccgcca
      721 tcgagtccag atcgtcggtg aaaatctcgg cacggttccc gacgccgtca ccgcagccat
      781 ggcgcagcga aaattcctcg gcatgcatgt cggccagttc ggcgtcaacg ccgatcccaa
      841 ccacgcactg gacgcggttc ccgccaatgt cgttgcgagt ctgaacactc acgacaccgc
      901 gaccttcatg ggtttctggc aggagaaaga catcgacgac agcgtcgact tgaaccttct
      961 cgacagcgat caagccgaca cccagcgccg ctaccgcgcc acccagcgcg acgcactcgt
     1021 cgcttacctg cgcgcgcacg actacatcgg cgcggataac tcggcagcgg ccgtgctgcg
     1081 cggctggctg atttttcttg ccgggcagcc aaccgagttc atattgctta acttagaaga
     1141 cctctggctc gaaccggcgc cgcaaaatgt ccctggcacc tggcaggagc ggcccaactg
     1201 gcaacgcaag gctcagtact ctatcgaaga gttgcgtggc cttgcgtcga tcaatgacgt
     1261 tttaacgaca atcagcgaca tccgtgcccg gatggtttag aatattactc atgtccgaag
     1321 tgcgcccgtt cagccggctg acagcccatg accgctacct tttcaatcaa ggcagccatt
     1381 atcgcctcta cgataaacta ggcgccagag ttgtcgctgt gggccggacc tgcggcagct
     1441 atttcgcagt ctgggcgcct aacgccgaac cagtttcggt ggcctccatg ctctatctgg
     1501 attacggccg taaaaacggc gaacgggttc ccaagcggca cggcggggag aatctcgaga
     1561 cgatcgaacc tttacgccgt ttaaatcatg tgatctacga aaactctggg tgcgccactt
     1621 gaatcaactc tgccgtacag aaccggcgca gcacgaggtc gactgcgagc ccgccggttt
     1681 cgcatggata gattgcgacg acgccgagag cagcgtggtg agcacgctgc gcaaaggcaa
     1741 atcgaccgca a
//
LOCUS       DATIRS010000507         3169 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_136017, whole genome shotgun sequence.
ACCESSION   DATIRS010000507 DATIRS010000000
VERSION     DATIRS010000507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3169
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136017"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..960
                     /locus_tag="VLM90_06390"
     CDS             <1..960
                     /locus_tag="VLM90_06390"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12625.1"
                     /translation="GELGKSNFSRYTKERLGGFIEREAGADFKPTSIFGRDMKEFTEY
                     FNRGGRTAIGHHARVFYCVEPLKYIGQDEVNADIANLKAALQGKQYTEAFLPAIAPGT
                     MEHWMKNEYYKTTEEYLFAIAGAMREEYQAIVDAGFVLQIDDPDLADAWQMHPEMSLA
                     DYRKYQELRIAALNHALAGLPEERVRFHMCWGSYHGPHKYDVPLKDIADLILKVKASA
                     YSIEASNPCHDHEWRVWEEVKLPDGKMLMPGVVGHYSDFIEHPRAIADRLVRYAKIVG
                     KENLIAGTDCGIGSRVGHPQVGWAKFEAMAEGARITTKELWEK"
     gene            complement(1038..1610)
                     /locus_tag="VLM90_06395"
     CDS             complement(1038..1610)
                     /locus_tag="VLM90_06395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12626.1"
                     /translation="MKNYLTAGILLAPLATAAAFAQSGDEDFYQQWVNIKDGEVSVAF
                     NQTPVQFALDAFHAKTGFNIVVPASTESKTVNLRLHRQPFEPAVRSLISTIGYDNFAM
                     VYDQKGRPHSAVVLGARAPAGVEASNTAAPIAPLTIEERDRLKKEIDRWNELKQEERG
                     RIEERLRNVPPSEDREILVREYGRQLLGLK"
     gene            complement(1817..3031)
                     /locus_tag="VLM90_06400"
     CDS             complement(1817..3031)
                     /locus_tag="VLM90_06400"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSQ12627.1"
                     /translation="MSQPRIIIAGAGPVGVVSALALAQQGYAVTLLEADAVIDDNPRA
                     ATTHPSTLEMIARVGLIDQFIKEGLVARYFQFWDKPTRSKIVQFDHELLREETPYPFV
                     VQTEQHKLARMGIERLKTFADVEVRFSTRVTGVTQDANQATVTAEGPNGLETHRGDWV
                     IGADGGRSTIRKSMEIDFEGFTWPENFLVLTTTEDFQQLLGDCCYRNYLADPDEWTNL
                     FKVAGDDGKGRWRAVFPTKVEESDEQALGDESTYSRLQRVYPLNRCYNVVHRNLYKVH
                     QRVAATFRKGRVILAGDSAHVNNSVGGLGLNSGIHDAMELVDTLHEIIENKADHALLD
                     RYTRRRRASNIESVQEQTIANKKRLEERDPAARQARFDELRATAEDPKQHKDFLLRTS
                     LIASVRKARNID"
BASE COUNT          644 a          899 c          947 g          679 t
ORIGIN      
        1 ggcgagctgg gcaagtcgaa tttctcccgc tacaccaaag agcggctggg cggattcatc
       61 gagcgcgagg ccggcgcgga tttcaaaccg acatcgatct tcggccgcga catgaaggag
      121 ttcaccgagt atttcaaccg cggcggcaga accgccatcg gccatcatgc gcgggtgttc
      181 tactgcgtcg agccgctcaa gtatatcggc caggatgaag ttaatgccga catcgccaat
      241 cttaaagcgg cgctccaagg caagcagtac accgaggcat ttctcccggc catcgctccc
      301 ggcacgatgg agcattggat gaagaacgaa tattacaaaa ctaccgagga gtatctcttt
      361 gccatcgccg gcgcgatgcg tgaagagtac caagcgatcg tcgatgccgg atttgtcttg
      421 cagatcgatg atcccgatct cgccgatgct tggcagatgc atccggaaat gtcgctggcg
      481 gattaccgga agtatcagga gctgcgcatc gctgcgctga accatgcgct cgccggcttg
      541 cccgaagagc gcgttcgctt ccacatgtgc tggggcagtt accatgggcc gcacaaatac
      601 gacgtgccgc tcaaggacat tgcggatctg attcttaaag ttaaagcgag cgcctactcc
      661 atcgaggcgt ccaatccctg ccacgatcat gagtggcgcg tctgggaaga ggtgaagctg
      721 ccggatggca agatgctcat gcccggggtc gtcggccact acagcgattt catcgagcat
      781 ccgcgggcca tcgccgaccg tttggtgcgt tacgccaaga tcgtcggcaa ggaaaacctc
      841 atcgccggta ccgattgcgg catcggctcg cgggtcggcc atccgcaggt cggctgggcg
      901 aagtttgagg cgatggccga aggggcgcgc atcacgacta aagaattgtg ggaaaagtaa
      961 aaaaggctga gggatgaagg cggaagaagg aagcgcgcat atcgctgcgc cgcttcgtcc
     1021 tccgacgttc gatcgactta cttcaagcct aagagctggc ggccatactc tcggaccaga
     1081 atctcgcggt cttccgacgg cggcacgtta cgcaagcgct cttcgatgcg gccgcgctct
     1141 tcctgcttca gttcattcca gcggtcgatt tcttttttga gccggtcgcg ctcttcgatg
     1201 gtcagaggcg cgatcggtgc agcggtgttc gatgcttcga ccccggcggg tgcccgcgcg
     1261 ccgagaacca ctgcgctatg gggccggcct ttctgatcgt agaccatggc aaaattgtca
     1321 taaccgatgg tggagatgag cgaacgaacc gccggttcga agggttgacg atgcaaacgc
     1381 agattgacgg tcttcgactc cgtcgacgct ggcacgacga tgttaaatcc ggtcttggcg
     1441 tgaaacgcat cgagagcgaa ttgcacgggc gtctgattga aggcgacgga aacttcgccg
     1501 tccttgatat tgacccactg ctggtaaaaa tcctcgtcgc cgctctgggc gaaggctgcc
     1561 gccgtcgcta atggcgccaa caggattccg gctgtcaaat agttcttcat agtgtatgcc
     1621 cctcccattc gttccagtaa ttggagcagc aactaccatg ccccgagcaa atgttccttc
     1681 gattgccagg ggtttcgtct aattggctag agccttccgt gaagtgggcg gtttgcggcg
     1741 gaaacggaac aggattgtgc cgtgacgagg gggtgctgtt cgaatcgatt cgccagcatc
     1801 cgcggagtga caacagtcag tcgatgttcc gcgctttgcg cacgctggcg attagcgagg
     1861 tgcgcaggag aaaatccttg tgctgtttcg ggtcttcggc ggtggcgcgc agctcgtcga
     1921 agcgggcttg gcgcgccgcg gggtcgcgct cttcaaggcg ctttttgttg gcgatggttt
     1981 gttcctggac cgattcaata ttgctggcgc gccgccggcg ggtgtagcgg tcgagcaacg
     2041 cgtgatcagc tttgttctcg ataatctcat gcagcgtgtc gaccagttcc atggcgtcgt
     2101 gaatgccgct attcaagccc aggccgccga cggagttgtt cacatgagcc gaatcgccgg
     2161 caaggatcac gcggcctttg cggaaagtgg cggcgacacg ctgatgaact ttgtagagat
     2221 tgcgatggac gacgttgtag caccggttca atggatagac ccgctgcaaa cgcgagtagg
     2281 tcgactcgtc gcccagcgcc tgctcgtcgc tctcttcgac tttggtcgga aacaccgcgc
     2341 gccagcgccc cttgccgtcg tcaccggcga ctttgaataa gttcgtccat tcatccggat
     2401 cggcgagata gttgcggtag caacaatcgc cgagcagctg ctgaaagtct tcggtcgtcg
     2461 tcagcacgag aaaattctcc ggccaggtga agccttcgaa gtcgatttcc atagattttc
     2521 ggatcgtgct gcgcccgccg tccgcgccga tcacccaatc gccgcgatgg gtttccagtc
     2581 cgttcggtcc ttccgcagtt acagttgcct ggttggcgtc ttgtgttact ccggtaaccc
     2641 gagtggagaa tcgcacctcg acatcggcaa aggttttaag ccgctcgatc cccatgcgcg
     2701 ccagtttatg ctgctcggtc tgcaccacga acggataggg cgtctcctcg cgcaaaagct
     2761 catggtcgaa ctggacgatc ttagaacgtg tcggcttatc ccaaaactga aaatagcgcg
     2821 ccaccagccc ttccttgatg aactgatcga tcaagccaac ccgcgcgatc atttccaagg
     2881 tcgacggatg cgtcgtcgct gcccgcggat tgtcgtcaat gaccgcgtcg gcctcgagca
     2941 gcgtgaccgc gtagccctgc tgcgccagcg ccagtgcgga aacgactccc accggtccgg
     3001 caccggcgat gatgatgcgg ggttgtgaca tgaattagca atctcctaat ggcctcattg
     3061 tttgctctat tagtgcatag tcgcccctgc attcaagtgt cagcggatga agcttatctg
     3121 agcgcgaaga atatcggccg tgatgtccga ggcaaaaaaa gaggactca
//
LOCUS       DATIRS010000508         2612 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_432375, whole genome shotgun sequence.
ACCESSION   DATIRS010000508 DATIRS010000000
VERSION     DATIRS010000508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2612
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_432375"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..901)
                     /locus_tag="VLM90_06405"
     CDS             complement(<1..901)
                     /locus_tag="VLM90_06405"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12628.1"
                     /translation="MLRHIFAKLSGLYFGWRMIAVSCAIRVLGGGLHAYGLSVFFLPV
                     THELGLTRTATSLVFSLARAQGAIEGPVAGYCIDRFGPRPVIAIAVALAGIGYLMLAG
                     VHSYAMLLVVYMGIISLSYQAGFMDATMALANTWFIRKRALAMSITSGSIALGGALLT
                     PLLAYAVHSWGWRTASIAAGIAFLLAGLPLSLLIHRSPESLGLLPDGATPADKTSRNG
                     ETVSAAQTASESEFTLGETLRTYQFWLLGVATSLRVICSSAVLVHFVPILVWKGYSEP
                     EGAFYLGVIAFCGMPTHLLIGWLG"
     gene            complement(910..2178)
                     /locus_tag="VLM90_06410"
     CDS             complement(910..2178)
                     /locus_tag="VLM90_06410"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12629.1"
                     /translation="MIGKFTEQLHGLFYGWRMIAAGCVMRMLGGGFHLYGFTIFFLPI
                     TNELGLSRAATSLVFSLARAEGAIEGPLAGYVIDRYGPRPMMLAGIILSGLGYMLLAT
                     VDSYAAFLIVYLGVISLAFSAGFMHSPMVLANSWFIRRRAMAMTLISSAIGIGGTLIT
                     PVLAFTVAQWGWRYGAFIAGIGLIVTGVPVALYVKRSPESMGLLPDGVSPTSEQERQA
                     PNNSAATAEPEREFNLKQAMKSAAFWKLILATTTRVGVFNSITVHFVPIMVWRGASEA
                     KAAALLATLALMSLPSHLFVGWIADRVNKPGLMAACMLIGAGAVAILAYGDGEWALWT
                     FTILFTFVEALFPVSWATVGDYFGRKHFATIRGSMSFFYLWGPALGPVITGYVYDRHQ
                     SYAPLMNAYIAIALVAGLLYASLRQPKLPA"
BASE COUNT          589 a          751 c          821 g          451 t
ORIGIN      
        1 cgcccagcca accgatcagc aaatgggtcg gcatgccgca aaaagcgatg acgcccaaat
       61 aaaatgcgcc ttcgggctcg ctgtaaccct tccacaccag gatcggcacg aagtggacca
      121 gcacggcgct ggaacagatc acgcgcaagc tggtggcgac gccgagcagc caaaactggt
      181 aggtgcgcaa agtctcgccc agggtgaact cggattcgct cgcggtttgc gcggctgata
      241 ccgtttcacc gttgcggctt gtcttatcgg ccggtgtggc gccatcgggc aacaggccga
      301 gactttccgg cgagcgatgg atcaacagcg acagcggcaa gccggccagc aaaaatgcga
      361 tgccggcagc gattgaggct gtacgccagc cccagctgtg caccgcatag gcaagtagcg
      421 gcgtgagcag cgcgccgccg agagcgatgg acccgctggt gatcgacatg gccagggcgc
      481 gcttgcggat gaaccaggta ttggccagtg ccatggtggc gtccatgaag ccggcttgat
      541 aggagagcga gatgatgccc atgtagacga ccagcaacat ggcgtagctg tgcacgccgg
      601 cgagcatgag atagccgatg ccggcgagcg cgacggcgat ggcgatcacc gggcgcgggc
      661 cgaagcgatc gatgcaatag ccggcgacgg ggccttcgat ggcgccctgg gcgcgggcga
      721 gggaaaatac caacgaagtc gccgtgcgcg tcagtcccag ttcatgggtc accggcagaa
      781 aaaacaccga cagtccatag gcgtgcagac cgccgccgag gacgcggatc gcgcaactga
      841 cggcaatcat gcgccagccg aagtataacc ccgagagttt ggcgaaaatg tggcgcagca
      901 tcacaggtct taggccggca atttaggttg gcgcagcgaa gcgtagagca agccggcgac
      961 cagcgcgatg gcgatgtagg cgttcatcaa gggcgcgtaa ctttgatggc ggtcgtagac
     1021 gtagccggtg atgaccgggc ccagtgccgg accccagaga taaaaaaagc tcatgctgcc
     1081 gcggatcgtg gcaaagtgtt ttctgccgaa atagtctccg actgtcgccc agctcaccgg
     1141 gaacagcgct tcgacgaagg tgaaaagaat cgtaaacgtc cacagcgccc actcgccatc
     1201 gccgtaggcc aaaattgcca ccgccccggc gccgattaac atgcaggccg ccatcagtcc
     1261 gggtttgttg acccggtcgg cgatccaacc gacaaacaag tgcgacggca ggctcatcaa
     1321 cgccagggtc gccagcagcg ccgcagcttt ggcttcgctg gcgccgcgcc agaccatgat
     1381 cggcacgaag tggacggtga tcgaattgaa aacgccgacg cgggttgtgg tcgctagaat
     1441 tagtttccag aaggcggcgg atttcatcgc ctgcttcagg ttgaattcgc gctccggttc
     1501 ggcagtcgct gcgctgttgt ttggcgcctg gcgctcttgc tcagacgttg gcgacacgcc
     1561 gtcggggagc aaacccatcg attcgggtga gcgcttgacg taaagcgcga cggggacgcc
     1621 ggtgacgatc aggccaatgc cggcgataaa cgcaccgtag cgccagcccc attgagcgac
     1681 ggtgaaggcg aggaccggcg tgatcagcgt gccgccgata ccgatggcgc tgctgatcag
     1741 cgtcatcgcc atggcgcggc ggcggataaa ccaagagttg gcaagcacca tcggcgaatg
     1801 catgaagccg gcggaaaacg ccagcgagat cacgcccaga taaacgatca gaaacgccgc
     1861 gtagctatct accgtggcga gcaacatata gcctaagccg gacaagataa tcccggcgag
     1921 catcatcggc cgtgggccgt aacgatcgat gacgtaaccg gccaacggcc cttcgatggc
     1981 gccttcggcg cgggccaggg aaaacaccag cgaggtggca gcgcgcgaca gaccgagttc
     2041 attagtgatc ggcagaaaga aaattgtaaa gccgtaaaga tgaaaaccgc cgccgagcat
     2101 gcgcatgacg cagccggcgg cgatcatgcg ccagccgtaa aacaggccgt gaagttgttc
     2161 tgtgaatttg ccgatcatcg gtgcatggga tcgtgagagt tgcggtaggg cgattggctt
     2221 tcaacctatc cgagtgggtc gaagcctgtc aacgcggtta gtgaaaattg gcgcgtcgaa
     2281 acttgatgat cgaggtttag aaagggtccg ttcgatgtcg gcttttcctt tcgtcattcc
     2341 ggcgcaggcc ggaatccagg ttttctgcag cctgctagtg taggcgaaga tggataccgg
     2401 cctacgccgg tatgaccgat ggactctcgt aggttcagtt aacacagcat aacccaacaa
     2461 ctcgtctggc atatcgctgc gcttcggata taaccattgt atctacgcca ctaacatatt
     2521 cgccaacttt tccaccacga cttctcgatg cttgccgaca ttccgtcgca actgatcgcc
     2581 ctggtcgccg cgctgtccta tgcaatttcg gg
//
LOCUS       DATIRS010000509         1673 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_628943, whole genome shotgun sequence.
ACCESSION   DATIRS010000509 DATIRS010000000
VERSION     DATIRS010000509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1673
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_628943"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            184..>1673
                     /locus_tag="VLM90_06415"
     CDS             184..>1673
                     /locus_tag="VLM90_06415"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HSQ12630.1"
                     /translation="MVHIRYSRWAASGGDSLDPESVFDQLNENMNDTGDLQQAMRRLM
                     QKGLKQGDKQTKGIEDLLSQVAREMRKLYDEYKLQSAMDEVQEKLDSVVDQEQQTLEQ
                     MDESGQDVQENKQFLNDLPGKTSEAVDKLTSYRFENSNAEKDFEQLLMQLEQIRKLEN
                     WLRREGSLFRGQTPMDFQQSQELMERMEDLRKLESQLSSMQLKDVDKELLEKLLGGDP
                     KQDFEGIMRMQSLLEEGGYVLESGDRFELTPKGVRRIGQLALRDIYQQLRRDGMGRHS
                     TRNRGSQEVVLESNKPYVQGDPLHINMIQTLKNALVRGGGVPVRIAPSDFSVYETELN
                     TRAATVLLLDMSWSMSWEGRFAAAKKVALAMESLVRALYPRDYFGIVGFFTRAVELKA
                     KDLPQATWNMGDPFTNLQDGLHLASTMLDRKPSANQQIIVITDGQPTAYCRDGRLYCE
                     WPLSFGGISQRAAEETLKEAERITRKGITINTFMLDDSPVLRGFVD"
BASE COUNT          389 a          484 c          522 g          278 t
ORIGIN      
        1 aagaagcgat caaaaccttg ggcatccaag aatcgccggc gctgatggca tcggccaccg
       61 agttcgtgct tgaaggattg catctccatc aaaagctcaa caaggaaatg gaaggcggcc
      121 gggtgaccta cggcaagtag cgcaggacta tcgcagccaa accgagcgct cgaaagataa
      181 cccatggtgc atatccgcta tagccgctgg gccgccagcg gcggagactc gctggacccg
      241 gagtcggtgt tcgatcagtt gaacgaaaac atgaacgaca ccggcgatct gcagcaggcg
      301 atgcgccggc tgatgcagaa ggggctcaag cagggcgaca agcagaccaa ggggattgaa
      361 gatctgttgt cccaagtggc gcgcgagatg cgcaagctct acgacgagta caagctgcaa
      421 tcggcgatgg acgaggtcca ggagaagctc gattcggtgg tcgaccagga gcagcagacg
      481 ctcgagcaga tggacgagtc gggccaggac gtccaggaaa ataagcagtt cctgaacgat
      541 ctgcccggca agaccagcga ggcggtcgac aagctcactt cctaccggtt cgaaaattcc
      601 aacgccgaaa aagacttcga gcagctgctg atgcagctcg agcagatccg caagctggag
      661 aactggctgc gccgcgaggg cagcttattt cgcggccaaa cgccgatgga tttccagcag
      721 tcgcaggagc tgatggagcg catggaggat ctgcgcaagc tcgagtccca gctgtcgagc
      781 atgcagttga aggacgtcga caaggagttg ttggaaaaac ttctcggcgg cgatcccaag
      841 caggacttcg aaggcatcat gcgcatgcag tcgctgctcg aagagggcgg ctacgtgctc
      901 gagagcggcg atcgcttcga gttgacgccc aagggcgtgc gccgcatcgg ccagttggcg
      961 ctgcgcgata tttatcaaca attgcgccgc gacggcatgg gccgccactc gacgcgcaac
     1021 cgcggcagcc aagaagttgt tctcgaaagc aacaaaccct atgtgcaggg cgatccgctg
     1081 catatcaaca tgatccagac cttgaagaac gcgctggtgc gcggcggcgg cgtgccggtg
     1141 cggatcgcgc ccagtgactt ttcggtttac gaaaccgagc tcaatactcg cgccgccacc
     1201 gtgctgttgc tggacatgag ttggtcgatg agctgggaag ggcgcttcgc cgcggcgaaa
     1261 aaagtcgccc tggcgatgga gagtctggtg cgcgcgctgt acccgcgcga ttacttcggc
     1321 atcgtcggtt tctttacccg cgccgtcgag ctcaaagcca aggacttgcc gcaggcgacc
     1381 tggaacatgg gcgatccgtt caccaactta caggatggct tgcacctggc gtcgaccatg
     1441 ctcgatcgca aaccgagcgc caaccagcag atcattgtta tcaccgacgg ccagccgacg
     1501 gcttactgcc gcgacggacg gctttactgc gaatggccgc tgagcttcgg cggcatcagc
     1561 cagcgcgccg ccgaagagac tttgaaagaa gccgagcgca tcacccgcaa aggcatcacc
     1621 atcaacacct tcatgctcga cgacagcccg gtgctgcgcg gcttcgtcga cga
//
LOCUS       DATIRS010000510         2424 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_825649, whole genome shotgun sequence.
ACCESSION   DATIRS010000510 DATIRS010000000
VERSION     DATIRS010000510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2424)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2424)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2424
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_825649"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            432..1283
                     /locus_tag="VLM90_06420"
     CDS             432..1283
                     /locus_tag="VLM90_06420"
                     /inference="COORDINATES: protein motif:HMM:NF039482.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+)/NADH kinase"
                     /protein_id="HSQ12631.1"
                     /translation="MIRTVGLVAKYHEAKAAQMVRWLIPWLRKRGKKVCVENGLTPRG
                     AHSCTKKEMAAQADLIISLGGDGTLLNIAPLVVRPEVPILGVNMGGLGFITEVAADEL
                     KSVLSKTLAGDYEVEKRMTLEVRVISKKGRLRRFRVLNDAVIAKGARSRIIDLETYVG
                     DEYLCTYRADGLIISTPTGSTAYSLAAAGPILEPTLGAIVLSPICPHTLTNRPIVVPS
                     DAPIHVTLRSFGDTVILSPDGQKGLRLNNGDKVEVRDFGLPVSLIKLPSRSYYEILRE
                     KLKWGER"
     gene            1296..>2424
                     /locus_tag="VLM90_06425"
     CDS             1296..>2424
                     /locus_tag="VLM90_06425"
                     /inference="COORDINATES: protein motif:HMM:NF024867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSQ12632.1"
                     /translation="MLRELRIKNFAVIDEVALELGPGLNIITGETGAGKSIILNALGL
                     VSGERGSSDIIRHKEDEATVEALFDGVPKLIEAKLADAGFALDGELVIKRILNRSGKN
                     RIYLNGSLCPLNLLAEIGGALVHIYGQHEHHSLLQPETHLNLLDAFADVDSMGLAMKQ
                     QFVDLTAAWRDLNETRDSLDRRRRERANLESQAEEIGRAQLKAGEEEELRARKNILAH
                     AEKLNLGCREGEELLYEGDAALVGRLGKYAAKLRELAAIDANLQPTEELIQSSLAQLQ
                     EAAAQLRRYAERVHFDPRALEQLEDRLAEIQRLKRKYNASVDDILRMESDIQKSLDRL
                     ENSEEQIAAMEKTFTAARGRAWGSAEKLSHERQRAAKKLRRE"
BASE COUNT          535 a          654 c          732 g          503 t
ORIGIN      
        1 aatgtggtgt tttgtctttt cgttaacgtt tggcggcaat ggccgccgca gcgcagcggc
       61 gatgtaagcg cttagccaac gcatgacctg tgagattttt ggttcggtgt tcatagccca
      121 atcgttcaaa agaatcaacc gggcatttcg cgatcggggt atagaccccg ctcgcgacca
      181 aaagggatgt tcaaccccct ttggaaaccc cagcaatttt gtgcccgcag caagctgcgg
      241 ggaatattag attcaaatga tcaaaaacac caaatccaaa acaagcttca tgcggatgcc
      301 gtgtttaaaa tttcctgact tgagatttat ttggctgtga ctttgtttcg ggattcggat
      361 gtcggatttt ctgccgtcat ggactttatt tttagccatg tgatactctc acggctggag
      421 atgctaactg catgattcgc accgttggat tagttgccaa atatcatgaa gccaaggcgg
      481 cgcagatggt ccgctggctg attccctggc tcaggaagcg cggcaaaaag gtctgcgttg
      541 aaaacggctt gacgccgcgc ggcgcgcact cttgtaccaa gaaggaaatg gcggctcagg
      601 ccgacctgat catctccctg ggcggcgacg gcacgctgct caacatcgcg ccgctggtgg
      661 tgcggcccga ggtgccgatc ttgggcgtca acatgggcgg tttgggtttt atcaccgagg
      721 tggcggcgga tgaattgaaa tcggtgctca gcaaaaccct ggccggcgat tatgaagtgg
      781 aaaagcgcat gactctggag gtgcgggtga tcagcaagaa gggccgcctg cgccggttcc
      841 gtgtgctcaa cgacgcggtg atcgccaagg gcgcgcgcag ccgcatcatc gacttggaaa
      901 cttacgtcgg cgatgagtat ctatgcacct accgcgccga cggtttgatt atctccacgc
      961 ccacggggtc gacggcgtat tcattggcgg cggcgggacc gatccttgag ccgaccttgg
     1021 gcgcgattgt gctatcgccg atctgccccc atacgctgac caaccggccc atcgtcgtgc
     1081 cgagcgatgc gccgattcac gtcaccctgc gatcctttgg cgacacggtg attctcagcc
     1141 ccgacgggca aaaagggctg cgcctcaaca atggcgacaa ggtggaagtt cgcgacttcg
     1201 gtctgccggt gtcgctgatc aagctgccgt cgcgtagtta ttatgaaatt ctccgtgaaa
     1261 aactcaaatg gggagagcgc tagtcagtcg cgattatgtt gcgagagttg cgaatcaaaa
     1321 acttcgcggt gatcgacgaa gtggcactgg agctggggcc gggactcaac attatcaccg
     1381 gcgaaactgg tgctggcaaa tcgattattc taaatgccct cggactggtc tccggcgaac
     1441 ggggcagctc ggatatcatt cgccacaagg aagatgaagc gactgtcgag gcgttgttcg
     1501 acggcgtgcc caagctcatt gaggctaagc tcgccgatgc cggtttcgca cttgatggcg
     1561 agctggtgat caagcgtatc ctcaatcgtt cgggcaaaaa ccgcatttat ttgaacggca
     1621 gtctctgccc gctcaatctg ctggccgaga tcggcggcgc cttggtgcat atctacggcc
     1681 agcatgagca tcacagcttg ctgcagcccg aaacccactt aaacctgctc gacgctttcg
     1741 ccgatgtcga ttccatgggg ctagcgatga aacagcagtt tgtcgacctg acggcggcgt
     1801 ggcgcgatct caacgaaacc cgtgactctt tggaccggcg gcgccgcgaa cgcgctaatt
     1861 tggaatccca agccgaagag attggccgcg ctcaactcaa agccggcgag gaggaagagc
     1921 tgcgggcgcg caagaatatt ttagcgcacg cggaaaaact caacttgggc tgccgcgagg
     1981 gcgaagagct gctttacgaa ggagatgccg cgctggtggg ccggctgggc aagtatgcgg
     2041 caaagctgcg cgagctcgcc gccatcgatg ccaatttgca accgaccgaa gagctgattc
     2101 aatcttccct ggctcaattg caagaggcgg cggcgcagct gcgccgctac gccgagcggg
     2161 tgcatttcga tccgcgggcg ttggaacagc tcgaagaccg cttggcggaa attcagcggc
     2221 tcaagcgcaa gtacaacgcg agcgtcgatg acatcctcag gatggagagc gatatccaaa
     2281 aatcgctcga ccgtttggag aatagcgagg aacaaatcgc tgccatggaa aagactttta
     2341 cggcggcacg cgggcgggcc tggggtagcg ctgagaagct ttcccatgaa cgccagcgcg
     2401 cggcgaaaaa actgcgccgt gagc
//
LOCUS       DATIRS010000511         1685 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_923935, whole genome shotgun sequence.
ACCESSION   DATIRS010000511 DATIRS010000000
VERSION     DATIRS010000511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1685
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_923935"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            67..1263
                     /locus_tag="VLM90_06430"
     CDS             67..1263
                     /locus_tag="VLM90_06430"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HSQ12633.1"
                     /translation="MTVLADRIKLVKPSVTLAIAAKAGKLRADGIDVVNFSAGEPDFD
                     TPEHIKAAAIDALRKGMTKYTDVKGIEPLRAAIAQKYQEEYGLSYRKEDIIVSCGAKH
                     ALYNLLQAVVNPGDEVLIPAPYWVSYADMALLAGGVPKLIATDESSGFRITPEQLQTA
                     LSPRTKVFILNSPGNPTGATYSKDELLAIGKVLAQHPCLIFADDIYDKIVYDGFAVHN
                     IVALCPHLRERTIIINGVSKTYAMTGWRIGYAMGAGDVIAAAGKIQSQSTSNPTSIAQ
                     WAALAALRGPQDTVAVMVREFQKRRAVIVELLNAIAGIHCLKPSGAFYVFPNIAALIG
                     KSANGKKLNSPCDVADYLLEEAKVAGVPGEDFGSQQHIRFSYATSLPDIEKGCMRIRD
                     AVAKLS"
BASE COUNT          396 a          491 c          452 g          346 t
ORIGIN      
        1 ggtctggtgc ccgacaatgt cctgaagaaa ctccaagaga aatttaaaaa ttaaggattt
       61 tgcgccatga ctgtgctggc agaccgaatc aaactcgtca aaccctcggt gacactggcg
      121 atcgccgcca aagccggtaa acttcgcgcc gacggaatcg atgtcgttaa tttctccgcc
      181 ggtgagcccg acttcgacac gccggagcat attaaagccg ctgccattga cgcgctgcgc
      241 aaaggcatga ccaagtacac cgatgtcaaa ggcatcgaac cgctgcgcgc ggcgatcgcg
      301 caaaaatatc aagaagaata cggcctgagc taccgtaagg aagatatcat cgtcagctgc
      361 ggcgccaagc atgcgctgta taatttgctc caagcggtgg tcaatcccgg cgacgaggtt
      421 ttgatcccgg cgccctattg ggtcagctac gccgacatgg cgctgttggc cggcggcgta
      481 ccgaagctga ttgcgacgga cgagtctagc gggtttcgca tcacaccaga gcaactccaa
      541 accgccttga gcccgcgcac caaagttttt atcttgaaca gtccgggtaa tccgaccggc
      601 gcgacttaca gtaaagacga actgctggcc atcggcaaag ttttggcgca acacccatgc
      661 ctgatattcg ccgacgatat ctatgacaag atcgtttacg acggctttgc cgtgcataac
      721 atcgtcgcgc tctgtccaca tctgcgcgag cgcacgatca tcatcaacgg cgtctcgaag
      781 acctacgcca tgaccggctg gcgcatcggc tacgccatgg gcgccggcga tgtgatcgct
      841 gcggcgggaa aaattcagag ccagagcacg tcgaatccga cctccatcgc ccagtgggcg
      901 gcgttggcag cgctgcgcgg cccccaggac acggtggcgg tgatggtgcg cgaattccaa
      961 aagcggcgcg ccgtgattgt cgagctgctc aacgccatag cggggattca ttgcctcaaa
     1021 ccgtcgggcg cattttacgt cttccccaac atcgccgccc tgatcggcaa atccgccaac
     1081 ggcaagaagc tcaattcgcc atgcgacgtc gccgactatt tgttagaaga agccaaggtc
     1141 gcaggcgttc ccggagaaga cttcggctcg cagcagcata ttcgcttctc ctatgcgact
     1201 tcgctgccgg atatcgaaaa gggttgcatg cgcatccgcg acgcggtcgc caagcttagc
     1261 taattcgcgc cttcagaaat tgaccggcaa acgcgcagcg gcctcctcgg attacctccc
     1321 gcaaagacgc aaaggccgca aagataacgg gatggtgccc gtcatcccga gcgaatacca
     1381 gggatctcgg agagatttct cccttcggtc gaaatgacaa cgattctgaa ccggcgcgtt
     1441 ttgcgccttg gcgggagaaa tatccgtgtc cgatagtatt tgactcttga aaaatttgcg
     1501 tgaaccacgc taactgtcaa ctatagtagt acgaagttcg gaataataag tatccgaaac
     1561 cttcgcgccc ttcgtggtga atgaaatgtt ttcttaagcc gctttgtcct gcccggcagc
     1621 tgacacagcg acggctacct tctttttcct aaaatactcg cgattagaag tcgagtcgct
     1681 tgccg
//
LOCUS       DATIRS010000512         1932 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1711013, whole genome shotgun sequence.
ACCESSION   DATIRS010000512 DATIRS010000000
VERSION     DATIRS010000512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1932)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1932)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1932
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1711013"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..987)
                     /locus_tag="VLM90_06435"
     CDS             complement(<1..987)
                     /locus_tag="VLM90_06435"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12634.1"
                     /translation="MKIKPLQLYSLAAIVQIAGSSGAAMLAPFFMKDHGYSIAAASVP
                     LVVNGLGRVCSDLTSGVLASYFSSGVLIVAASAASIVVAALAHFFIEAPVVFLGAFTL
                     LGITEAMFALSIRKIAFEQSEPGQQGRVQGQVAAALGIGFSLGPLAGGFVGKLFGPQV
                     LFAFYALPQVIGLILILWGGAHRSRAITQEASVQLWREGKTLLTRASFLASSLAVFQS
                     FVMLVGVTRIAFPFLAVNQRGYALDWVGTVVAISRMTDTFGRYTGGWLCDRITAPRVI
                     LLGVAIGIPMFIIQPYGSGVLSLVLPLTVMTMGFGYSNVGATTFALQSAEPKA"
     gene            1521..1835
                     /gene="glpE"
                     /locus_tag="VLM90_06440"
     CDS             1521..1835
                     /gene="glpE"
                     /locus_tag="VLM90_06440"
                     /EC_number="2.8.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF001195.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004792 - thiosulfate sulfurtransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase GlpE"
                     /protein_id="HSQ12635.1"
                     /translation="MEIRQIQIHEAKKKLDDRNCVFVDIRDPGSYQQAHIPGAIHLHD
                     GNAQEFLQNTAKDQDVIVYCYHGNSSMGATGYFLENGFTNVASMMGGFEAWRQVYEHE
                     AT"
BASE COUNT          481 a          515 c          593 g          343 t
ORIGIN      
        1 ggccttgggc tccgccgatt gcagggcgaa ggtggtggcg ccgacgttcg aataaccgaa
       61 gcccatggtc atgaccgtta gcggcagcac caaggataag acgccggagc catagggttg
      121 gataatgaac attggtatgc cgatggcgac tcccagcaaa atcacccgcg gcgcggtgat
      181 gcgatcgcac agccagccgc cggtgtagcg gccgaaggtg tcggtcatgc gcgagatcgc
      241 gaccaccgtg ccgacccaat ccaaggcgta gccgcgctga ttgaccgcga gaaatggaaa
      301 cgcgatgcgg gtgacgccga ccaacatgac gaaagattga aacaccgcca gtgacgaggc
      361 cagaaacgaa gctctcgtta gcaaggtctt gccctcgcgc cagagttgca ccgaagcttc
      421 ttgggtgatg gcgcgcgagc gatgggcgcc gccccaaaga atcaaaatta gcccgatgac
      481 ttgcggcagc gcgtaaaagg cgaacagcac ttgcggtccg aagagtttgc cgacgaatcc
      541 gcccgcaagc ggaccgagag aaaagccgat gccgagggcg gcggcgactt gaccttggac
      601 tcggccctgt tggccgggtt cggattgttc aaatgcaatt ttgcggatgg agagggcgaa
      661 catcgcttcg gtgataccga gaagcgtgaa cgcgccgagg aataccaccg gcgcttcgat
      721 aaaaaaatgc gccaaggcgg cgacgacgat ggatgccgcc gaggcggcga cgatcaacac
      781 gccggagctg aaatagctcg ccagcacgcc ggaggtgaga tcggaacaga cccggcccag
      841 gccgtttacg accagcggca cgctcgccgc ggcgatcgaa tagccgtgat ctttcatgaa
      901 aaacggcgcc agcatagccg cgccggagga gccggcgatc tgaacgatgg cggccaggga
      961 gtagagctgc aacggtttga ttttcatgaa ggcgaattga tgtttgctgg atcagcgcgt
     1021 ttatacgcga tggccggagg gttttccact gtggacagcg agaaataggc ttgatagaac
     1081 cactgcattg cagcgcggca gtgctgcaaa caaagcggag aaggggtttt caccacgaag
     1141 gacccagcgc ggcgccgccg caaccgaatt tcggaatatc tcgcgcaaag cacgcaaagg
     1201 gcgctaagga agaacgttgt catttcgaac gcagagagaa atccttccta gatctttcgc
     1261 attcgctcag gcctctggcc tgtcacttcg cgaccttggc ggccttggcg cgaggattat
     1321 ccgaatccga ggcgtctcgg ctcccggaca atttgcgcaa gccgcgcaaa ttatcacgga
     1381 taatagttcg aagcgtacga agttcggaga tttggtcatc caaacccttg gtgtccttcg
     1441 tgaccttcgg ggtgagtcac tccggataaa cgaccaacag cgtgagacac tgcactagcg
     1501 taatacagaa ggagagagcg atggagatcc ggcagatcca aattcatgaa gcgaaaaaga
     1561 aactcgatga caggaactgt gtgttcgtcg acattcgcga tcccggctcg taccaacagg
     1621 cgcatattcc cggcgcgatt catttgcacg acggcaacgc tcaagagttt ttgcagaaca
     1681 ccgccaagga tcaagacgtg attgtctact gctatcacgg caatagcagc atgggcgcca
     1741 ctggatactt tctcgaaaat ggttttacta acgtcgccag catgatgggc ggcttcgagg
     1801 cctggcgcca ggtgtatgag catgaggcga cgtgagacgg tcgagtatgg aatatcgacg
     1861 attgaggatt gaatctaaac atcccccgca gcttgctacg ggcaccatca aatggagaat
     1921 ccaaagggga tg
//
LOCUS       DATIRS010000513         1937 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1906599, whole genome shotgun sequence.
ACCESSION   DATIRS010000513 DATIRS010000000
VERSION     DATIRS010000513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1937)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1937)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1937
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1906599"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1023
                     /locus_tag="VLM90_06445"
     CDS             <1..1023
                     /locus_tag="VLM90_06445"
                     /inference="COORDINATES: protein motif:HMM:NF014062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nodulation protein NfeD"
                     /protein_id="HSQ12636.1"
                     /translation="VMVWVGPSGAGAGSAGVFITLAAHVAAMAPGTNIGAAHPVAGGG
                     QEVKGVMGEKIENFTASFSESIAQKRGRNAEWAIQAVRKSVAITESDALKKNVIDIVA
                     KDIDDLLRQADGRKVDLDGKLQVLALKGAKVQRHDMSLKQKVLNILADPNIAYLLMMA
                     GLLGLYMEFSHPGVIFPGVAGAICLLLALASFQLLPLNYTGLALIALGIALLVGEMFL
                     PSFGVLGIGGIIALAMGSLLLFDTESSDLIVDRAIVFTAVATVGAIMLGLSYLVFRTQ
                     QAKPTMGMASLIGKIGEVRAELTPAGKIFVHGEYWNARADTPIEVGAKVEVIGYDGMI
                     LMVRQV"
     gene            1063..1818
                     /locus_tag="VLM90_06450"
     CDS             1063..1818
                     /locus_tag="VLM90_06450"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="slipin family protein"
                     /protein_id="HSQ12637.1"
                     /translation="MFGFGPVATFLVIAVAALVSGIKILKEYERGVVFRLGRMVGSRG
                     PGMVYIIPGIEKMVKMDLRTVTMDIPPQDVITRDNVSVKVNAVLYFRVIDPNLAVREV
                     ENYLFATSQLAQVTLRSVCGQGELDELLSEREKINSRIQDILDRQTDPWGIKVVLVEL
                     KHIDLPQEMQRAMAKQAEAERERRAKVIHAEGELQASQKLADAAGVMALQPMALQLRY
                     LQSLVEIASEKNSTTIFPVPIDLLTPFLKKDQS"
BASE COUNT          398 a          500 c          611 g          428 t
ORIGIN      
        1 gtgatggttt gggtcggacc gagcggtgcc ggagcgggtt cggcgggtgt cttcatcacg
       61 ctggcggccc atgtggccgc gatggcgccg ggcaccaaca tcggcgcggc ccatccggtg
      121 gccggcggcg gccaggaagt caaaggcgtg atgggcgaga agatcgagaa tttcacggca
      181 tcgttcagtg agagcatcgc gcagaagcgc ggccgcaacg ccgagtgggc gatccaagcg
      241 gtgcgcaaaa gcgtggcgat caccgagagc gatgcgctca agaaaaacgt catcgacatc
      301 gttgccaaag atattgacga tttgctcagg caagccgatg gccgcaaggt cgatctcgac
      361 ggcaagctcc aggtgctggc gctcaaaggc gcgaaagtgc agcgccatga catgagcctg
      421 aagcagaagg tgttgaatat cctggccgat cccaacatcg cttatctgct gatgatggcg
      481 ggcctgctcg gattgtatat ggagttttcc catcccgggg tgattttccc aggcgtggcc
      541 ggggcgattt gtttattact ggcgctggca tcgtttcaac ttctgccgct taactacacc
      601 ggtctcgcgc tgatcgcgtt gggcattgcg ctgcttgtcg gtgaaatgtt tttgccgagc
      661 ttcggggttt taggcatcgg cggcatcatt gccctcgcca tgggttcgct gctcttgttc
      721 gataccgaaa gctcggatct gatcgtcgat cgagcgatcg tcttcacggc ggtggccacg
      781 gtgggggcga tcatgcttgg tttgagctat ttagtatttc gcacccagca ggccaagccg
      841 accatgggca tggcaagttt gatcggcaag atcggcgaag tcagagccga gctcacgccg
      901 gcaggtaaga ttttcgtcca tggcgaatat tggaacgccc gggcggatac gccgatcgaa
      961 gtaggcgcca aggtcgaagt gatcggctac gacgggatga ttttaatggt gcgtcaggtt
     1021 tagggcggcg agttagacga ttactgacaa caggaggtat ccatgtttgg attcggaccg
     1081 gtagcgacgt ttctcgtcat tgcggtggcg gcgctggtca gtggcatcaa gattctcaaa
     1141 gagtatgagc gcggtgtggt gttccgcctc ggccgcatgg tcggctcgcg cggtccaggg
     1201 atggtttaca tcattccggg catcgaaaag atggtcaaga tggatctgcg cacggtgacc
     1261 atggatatcc cgccgcagga cgtgatcacc cgcgataacg tttcggtgaa ggtcaacgcg
     1321 gtgctttatt ttagggtcat cgatcccaat ctggcggttc gagaggtgga gaattatctt
     1381 ttcgccacct cccagctcgc ccaagtgacg ctgcgcagtg tctgcggcca gggcgaatta
     1441 gacgaactcc tgtccgagcg ggaaaagatc aacagccgca ttcaagacat cttggatcgg
     1501 cagactgatc cctggggtat caaggttgtc ctggtcgagc tcaagcatat cgatctgccc
     1561 caggaaatgc agcgcgccat ggcgaagcag gccgaagccg agcgcgaacg gcgcgccaaa
     1621 gtcatccacg ccgagggtga attacaggcg tcgcagaagc tcgccgatgc cgccggagtg
     1681 atggcattgc aaccgatggc attgcagctg cgctatctgc aaagtttggt cgaaatcgcc
     1741 tcggagaaaa actccacgac gattttccct gtgcccatcg atctgttgac gccgttcttg
     1801 aagaaggatc aatcgtaaga gcaatctcga ttagactgat ctgtcctgcc gatctcaact
     1861 acagcacggc acgccgtgcc gtaattttat tgtcttccgg ttcttgtgtg aatcaggcgg
     1921 gttgttgaga cggtttt
//
LOCUS       DATIRS010000514         1595 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_530397, whole genome shotgun sequence.
ACCESSION   DATIRS010000514 DATIRS010000000
VERSION     DATIRS010000514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1595)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1595)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1595
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_530397"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(32..1060)
                     /locus_tag="VLM90_06455"
     CDS             complement(32..1060)
                     /locus_tag="VLM90_06455"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ12638.1"
                     /translation="MTITIKQLALLVLSMLLGLPNLVGAQENFYRGKTIRMIVGTSAG
                     GGFDTYTRTIARHFGKHVPGQPAIVVENMAGAGHLIGANHMYKVAKPDGLTVGHFHGG
                     WFLYQLFKRPGIEFDAVKFEFLGSPIKESRACAFTKASGITSVERWLAAKTPVKIGGI
                     GGGAPDDMARMLAATTALPIQLVAGYKGTAEIRLAAESGELAGGCWTWDSIRSTWSKA
                     IQSGEAIVVLQALSKPHPELPNVPLAQSLAKTEEARQLIQAGVQEPAEYYRPYVAPPG
                     TPKLQVAVLRQAFDATMKDPEFLADAQKAKLDIEPITGNELANIVGKLFKLSPAMASK
                     LNDILSPK"
     gene            1225..>1595
                     /locus_tag="VLM90_06460"
     CDS             1225..>1595
                     /locus_tag="VLM90_06460"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSQ12639.1"
                     /translation="MIKTTALAATHMECRNLQESLKVLTELLAFEKLSEKPGKATLKH
                     PNTHWKLVVHEAGPDAPAKPMHNHWGVRVVSPEEVERAYDYLVAHKAEYKLGAIGKPT
                     WSHGSYSCYFVEPGTNGWEIE"
BASE COUNT          302 a          451 c          495 g          347 t
ORIGIN      
        1 tagacgacgc ggctgacttt taccagtaat ttcatttggg actgagaatg tcgttgagtt
       61 tactcgccat ggccgggctc agtttgaaca gtttgccgac gatgttcgcc agttcattgc
      121 cggtgatggg ctcaatatcg agcttggcct tttgcgcatc ggcgaggaac tccgggtctt
      181 tcatggtggc gtcgaaggcc tggcgcaaga ctgcgacctg tagttttggc gtacccggcg
      241 gcgcgacgta cgggcggtag tattcggcag gctcctgcac gcctgcttgg atcaattggc
      301 gcgcttcctc ggtcttggcc aggctttgcg caagcgggac gttgggcagc tctgggtgcg
      361 gtttcgacaa ggcctggagc acgacgatcg cctcgcctga ctgaatcgct ttgctccaag
      421 tcgagcggat cgaatcccag gtccagcagc cgccggcaag ttcgccgctt tccgcggcca
      481 ggcgaatctc ggcagtgcct ttgtatccgg ccacaagttg gataggcagt gcggtcgtcg
      541 cggccagcat gcgcgccatg tcgtcaggcg cgccgccgcc gatgccgccg atctttaccg
      601 gcgttttcgc cgcaagccag cgttcgacgc tggtgatgcc gctggctttg gtaaaggcgc
      661 aggcgcggct ttcttttatg ggcgagccca ggaactcgaa cttaaccgcg tcgaattcga
      721 tgcccggccg tttgaatagt tgatagagaa accagccgcc gtgaaagtgg ccgacggtca
      781 ggccgtcagg cttggcgact ttgtacatat gattggcccc gatcaggtgg ccggcgccgg
      841 ccatgttctc gacgacgatg gccggctgcc ccggcacatg cttgccaaaa tggcgcgcga
      901 tcgtccgcgt gtaggtatcg aagccgccgc cggccgacgt gccgacgatc atgcggatgg
      961 ttttgcctct gtaaaaattt tcttgggcgc cgaccaggtt cggcaagcct aagagcatgc
     1021 ttagaaccag aagcgccagt tgttttattg taattgtcat gcttgctcct cctcgcctcg
     1081 acggctcggc gaatgtaaga aatgggtgcg gttgtgtcaa ggcgatttca cgagtttgac
     1141 accccggtgc cgcggctgta aattttccgg cagtgacgac cgctcattta gttcacaaga
     1201 gatcaccgta ggagatccct atctatgata aaaaccaccg cactggcggc gacccatatg
     1261 gagtgccgca acttgcagga gtcgttaaag gtcctgaccg agctgttggc gttcgagaaa
     1321 ctttccgaaa agcccggcaa ggcgacgctg aagcatccca acacccattg gaagctggtg
     1381 gtgcatgaag ccgggccgga cgcgccggca aagccgatgc acaatcattg gggcgtgcgt
     1441 gtggtcagtc cggaagaagt tgagcgcgct tacgactact tggtcgcgca caaagccgag
     1501 tacaagcttg gcgccatcgg caagccgacc tggagccacg gctcttattc ctgctacttc
     1561 gtcgagcccg gcaccaacgg ctgggagatc gagtg
//
LOCUS       DATIRS010000515         1790 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1121561, whole genome shotgun sequence.
ACCESSION   DATIRS010000515 DATIRS010000000
VERSION     DATIRS010000515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1790)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1790)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1790
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1121561"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..442)
                     /locus_tag="VLM90_06465"
     CDS             complement(<1..442)
                     /locus_tag="VLM90_06465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12640.1"
                     /translation="MLLTDDELERMQKRFPYPRFTKAEYKRRYNNIRNMMRQLNLDCL
                     LIVGGSAAYGRLWFNIRYVTNMMGKAEMANYCFFPKEGEPAVVTRPGHSLAGGMLART
                     AVRNVIVGKPSVLGAIVNEIRECGYDRGRIGIVEYDPYTSIPKNH"
     gene            complement(482..1474)
                     /locus_tag="VLM90_06470"
     CDS             complement(482..1474)
                     /locus_tag="VLM90_06470"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12641.1"
                     /translation="MTCKAICMIMILSMFSWGAPSAGAAETMSKALFAYGAINAYMTS
                     TWIAKEQGLFRKHNVEVQPVFIIATQAAQAMLAGEVQVGLIGPTHVVNAVAAGGDMVM
                     IMGNQNKVRYQLIAHPSIKRAEDLKGKTVGIGASMAGLATLAAIISLDHLGLNPRRDN
                     ITLLPTGPEPARLAAVKAGTTQATVIAPEISQAAIAEGFPVLVDMAKLNIPFQASGLA
                     VLRKTLRSETVMIDRVGRATVDAIRFIATPANKNVVVQSIMKNLRISDRSRAEGVYAD
                     LAEELPGSICPTVPGVRSIMKLMVEMGINPKAAQVKVEDVVDLTLCKKWGGEAS"
     gene            complement(1582..>1790)
                     /locus_tag="VLM90_06475"
     CDS             complement(1582..>1790)
                     /locus_tag="VLM90_06475"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12642.1"
                     /translation="ISVDPDEYLVVDVVKRLGDDNIVVSTDYPHIDAHFPHAIDEFLE
                     IDGLSENNQRKILWDNCARLYNIG"
BASE COUNT          351 a          547 c          486 g          406 t
ORIGIN      
        1 agtggttctt gggaatcgac gtgtagggat cgtattcgac gataccgatg cgccctctgt
       61 catagccgca ctctctgatc tcgttgacga tggcgccgag cacgctgggc ttgccgacga
      121 tgacattgcg caccgccgtg cgcgccaaca tgcccccggc caaagagtgg ccggggcgag
      181 tcaccaccgc gggctcgcct tccttcggga aaaagcagta attggccatc tccgccttgc
      241 ccatcatgtt ggtgacgtag cggatattga accagagccg cccataggcc gccgagccgc
      301 cgacgataag caggcagtcc aggttgagct gccgcatcat gttgcgaatg ttgttatagc
      361 gccgcttgta ctccgccttg gtgaagcgcg gatagggaaa gcgcttctgc atccgctcta
      421 gttcatcatc ggtcagcagc atcgaattcc tcaaaattta gcgtcggatt cgctgcgaat
      481 cttagctcgc ttcgccgccc cactttttgc acagcgtcag atcgaccacg tcttccacct
      541 tgacctgggc ggccttgggg ttgattccca tttccaccat caacttcatg atcgaccgca
      601 cacccggcac cgtggggcaa atgctgccag gcaattcttc cgccaagtcg gcgtaaacgc
      661 cttctgctct cgaccggtcg gaaatcctga gatttttcat gatcgactgc acgaccacgt
      721 tcttgtttgc cggcgttgcg ataaagcgaa tcgcgtccac tgtcgcccgg ccgacgcgat
      781 cgatcatcac cgtctcgctg cgcagggtct tgcgcaaaac cgccaaaccg ctcgcctgaa
      841 acggaatgtt gagtttggcc atgtccacga gcaccggaaa tccttcggcg atggcggctt
      901 gggatatttc cggcgcgatc accgtcgcct gtgtggtgcc ggctttcact gccgccaggc
      961 gggccggctc cggcccggtg ggcaagagcg tgatattgtc ccggcgcggg ttgaggccca
     1021 gatgatccaa ggaaatgatc gccgccagag tcgccagtcc cgccatgctg gcgccgatgc
     1081 caactgtctt gccctttaag tcttccgcac gcttgatgct cggatgggcg atcaattggt
     1141 accggacctt gttctggttg cccatgatca tcaccatatc gcccccggcc gccactgcgt
     1201 tcacaacatg ggtgggcccg atcagcccga cctgtacttc accggcgagc atggcctgcg
     1261 ccgcttgcgt ggcgatgatg aaaaccggct gcacctccac gttgtgtttg cggaagaggc
     1321 cctgctcctt ggcgatccac gtcgacgtca tgtaggcgtt gatcgcgccg taggcaaaca
     1381 gcgccttcga catcgtctcc gcggcgccgg ccgacggcgc tccccagcta aacatagata
     1441 gaatcattat catgcagatt gctttacatg tcatttcgct actccttcga cttttacgtt
     1501 caaggttcaa tgttccaggt tcaaggaccg acttccgaaa taaacattga acccttgaac
     1561 cttgaacttt tgaacggaaa tttatccgat attgtacagt cgcgcgcagt tgtcccacaa
     1621 aatcttgcgc tggttattct cactcaaacc gtcgatctca agaaattcgt cgatggcgtg
     1681 gggaaagtgc gcgtcgatgt gcgggtaatc cgtcgacacg acgatattgt cgtcgccgag
     1741 gcgcttgacc acgtcgacga cgagatactc atcggggtcc accgaaatat
//
LOCUS       DATIRS010000516         3478 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1416220, whole genome shotgun sequence.
ACCESSION   DATIRS010000516 DATIRS010000000
VERSION     DATIRS010000516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3478)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3478)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3478
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1416220"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            78..620
                     /locus_tag="VLM90_06480"
     CDS             78..620
                     /locus_tag="VLM90_06480"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF020287.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSQ12643.1"
                     /translation="MLMWADLCPGARVVEAGVGAGALSMALLRAIGSDGRLISYELRE
                     DFSEMARQNVSRYFGPSPNWTIKLGDVATELAETDIDRVVLDLPEPWHVIERAWRALR
                     PGGILLCYLPTVLQVKNLVDALRDDKRFACIETSESLMRFWHFKGMSARPQHRMVAHT
                     GFLTSAKRLADGQKDIPRAP"
     gene            complement(730..1149)
                     /locus_tag="VLM90_06485"
     CDS             complement(730..1149)
                     /locus_tag="VLM90_06485"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSQ12644.1"
                     /translation="MKVKQIYHIGLPCNDLERGVKFYTEVLGMKCTKIGYDTESGGPY
                     KEKYGMFPNIARLFMEDGMCLVLFQRPEEVERGDFDEGTSHLALEVSSEDFDKANDEL
                     QKAGVKVSIDKPVVRPTGKAIYFYDTEQNYIQLWSRP"
     gene            1274..2245
                     /locus_tag="VLM90_06490"
     CDS             1274..2245
                     /locus_tag="VLM90_06490"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12645.1"
                     /translation="MKLTFVILAWFAFICSAATAHAQTPLERIVITYPSRSIASVDLY
                     IAQERGFFRQEGLNADVVQVRGNIGVTALLSGDAHAINNVGTIIRAMERSDLPAKVMS
                     QSLKKNLFWLVTKPEIKSLVELKGKTFGTTTFGGSQHLAGLRLLQKAGLDTDKDITMV
                     IGGDVPAQLQSLMSGAIHLAALSPPTVILARDKFKLRIHGSTLDDLPNLQNGLAFSEK
                     LLREKRDLVKRILRARSRAHRYLFENERGSAEVLAKLLNVDLNVALESYRLARPAFTT
                     NGLPTDKEVEEFLRADAEVLKLKEPVPAAKIFDFSLQREVNQELGIK"
     gene            2285..3235
                     /locus_tag="VLM90_06495"
     CDS             2285..3235
                     /locus_tag="VLM90_06495"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ12646.1"
                     /translation="MNILITGAGLIGAHAARQMVDAGHKVVLFDLSPNRDYIAKIVGK
                     DNADVVAANMLDLPALLTALEKFNVDTLVHTAGLIGGRVQENSYTGATNNILGTINIL
                     EAARLRKLRRVVYVSTFGVYERGKINDSVVKEVHPIGGHNLYATTKVCSEHLLHAYTS
                     MYNLDSIIIRPGGVFGRGFYVGGSTVGMVMRDLALAMIKGDPITIDAKTYGPNEYVYG
                     KDVGLALLLACQAQHPQQRIYNAGTGAVHGAEQLAQVVREVAPKLEVKVSGSSTADKS
                     RSMPMDISVSQAELGYTPKFPLKEALKDYMDELWDEGARG"
BASE COUNT          778 a         1070 c          930 g          700 t
ORIGIN      
        1 ttcgtccgag cttgccgcag ctgattccgc acctgccgcg caccgcgcag gtcgtctagc
       61 ccaaagacct gggaccgatt ttgatgtggg ccgatctctg tcccggcgcg cgggtcgtcg
      121 aggccggcgt cggcgccggc gctctgagca tggcgctctt gcgcgccatc ggcagcgacg
      181 ggcggttgat ttcctacgag ttgcgtgaag atttttccga gatggcgcgg cagaacgtgt
      241 cgcgctactt cggtccatcg cccaactgga cgatcaagct cggcgatgtc gccaccgaat
      301 tggcagaaac cgacatcgat cgcgtcgtcc tagacctgcc cgagccttgg cacgtcattg
      361 aacgagcctg gcgcgcgctt cggcccggcg gcatcttgct gtgctacctg ccaacggtac
      421 tgcaagttaa aaatttggtc gacgcgttgc gcgacgacaa gcgtttcgcc tgcatcgaga
      481 ccagcgaaag cttgatgcgc ttctggcact tcaaaggcat gagcgcccgg ccgcagcacc
      541 gcatggtcgc ccacaccggt tttctcacct cggccaaacg acttgctgac ggccaaaaag
      601 acattccccg agccccctga agctttctcc aggaaactcg gggaatgcca aaaaagcgtt
      661 tcgagtttcg agtcttgggt ttcgggttaa ctcggaacgc gaaacccgta acccgaaact
      721 atacccgcgt tacggcctcg accagagttg aatgtaattc tgttcggtat cgtagaagta
      781 aatcgccttg cccgtgggcc ggaccaccgg cttatcaatg gacactttca cgccggcttt
      841 ctgaagctca tcattggcct tgtcaaagtc ttcagagctg acttccaacg ctagatggga
      901 cgtgccctcg tcgaaatcgc cccgctccac ctcttcgggc cgttggaaca acaccaagca
      961 catgccatct tccataaata gtcgggcgat gttggggaac atgccgtatt tttctttgta
     1021 cgggccgccg ctctcggtgt cgtaaccgat cttggtgcat ttcatgccca agacttcggt
     1081 gtaaaacttc acaccgcgct ccaaatcatt gcaaggtaaa ccgatatgat agatttgctt
     1141 cactttcata aaaaatcatc ctccttattt acccctgtat actgtaattt ccggcgcggt
     1201 ttcaagagag ggttgcgtca cgcccgagaa tcggttgaca tccatgacat ttccactaaa
     1261 tatcgagggc caaatgaaac ttacattcgt tattctcgcc tggttcgcct tcatctgcag
     1321 cgccgcgacc gcccacgccc aaacgccgct cgagcgcatc gtcatcacct accccagccg
     1381 tagcatcgcc tccgtcgatc tctatatcgc ccaggaacgc ggctttttcc gtcaggaagg
     1441 gctcaacgcc gatgtcgtcc aggtgcgcgg caatatcggc gtcaccgcgc tactcagcgg
     1501 cgacgcccat gcgatcaaca acgtcggcac gatcattcgc gccatggagc gcagtgatct
     1561 gccggccaaa gtcatgtcac agagcctcaa gaaaaatcta ttctggctgg tgacgaaacc
     1621 ggaaatcaaa tccctggtag aactcaaagg caaaaccttt ggcaccacca ccttcggcgg
     1681 atcgcagcat ttggctggcc tacgtctgct gcaaaaggcc gggctcgata ccgacaaaga
     1741 catcacaatg gtaatcggcg gcgacgtccc cgctcagctc cagagcctca tgagcggggc
     1801 gattcacttg gcagcgctgt cgccaccgac cgtcatcctg gcgcgcgaca agttcaagct
     1861 gcgcattcac ggcagcacgc tggacgatct gcctaatctg cagaacggct tggccttctc
     1921 cgaaaaactg ctgcgggaaa aacgcgatct ggtaaaacgc atcctgcgcg cccgctcccg
     1981 ggcacaccgc tatctattcg agaacgaacg cggcagcgcc gaagtcctgg cgaagctatt
     2041 gaatgtcgat ctgaatgtcg cgcttgaatc ctatcgcttg gctcgcccgg cgtttaccac
     2101 caacggcctg cccaccgaca aggaagtcga ggaatttctc cgcgccgacg ccgaagtgct
     2161 gaagctcaaa gaaccggtgc cagcagcgaa gatttttgac ttcagcctgc aacgggaagt
     2221 gaaccaggag ctgggtatca aataatctgc atcgtcatcg aagcgaattt aagtaggagg
     2281 caacatgaac attcttatca ccggcgccgg actgatcggc gctcacgcgg cgcgccaaat
     2341 ggtcgacgcc ggccacaagg tcgtgctttt cgacctttcg cccaaccgcg attacatcgc
     2401 caaaatcgtc ggaaaagaca acgccgacgt cgtcgccgcc aacatgctcg acttgccggc
     2461 gctgctcacg gcgctggaaa aattcaacgt cgacactctg gtccacaccg cggggttgat
     2521 cggcgggcgg gtgcaagaaa actcttacac tggcgcgacc aacaatattt taggtacgat
     2581 caatattctc gaagcggccc ggctcagaaa actgcgccgg gtggtctacg tcagcacctt
     2641 tggcgtctac gagcgtggca agatcaatga cagcgtggtc aaagaggttc accccatcgg
     2701 cggccacaac ctttacgcca ccaccaaagt ttgttccgaa catttgctcc acgcctacac
     2761 cagcatgtac aacttggaca gcatcatcat ccgtcccggc ggcgtgttcg gccgcggctt
     2821 ctacgtcggc ggctccaccg tcggcatggt catgcgcgac ttggcgctgg cgatgatcaa
     2881 aggcgatccg atcaccatcg acgccaagac ttacggtccc aacgaatatg tctacggtaa
     2941 agatgtcggt ctcgcgttgc tactcgcctg ccaagcgcag catccccagc agcgcattta
     3001 caacgccggc accggcgcgg tccacggcgc cgagcaatta gctcaggtag tgcgcgaagt
     3061 cgcacccaaa ctggaagtca aagtcagcgg cagcagcacc gccgacaaga gccgcagcat
     3121 gccaatggat atcagcgtca gccaagccga actcggctac acgcccaagt tcccactcaa
     3181 ggaagcgctc aaggattaca tggatgagtt gtgggacgag ggagcgagag gatagcaacc
     3241 gaaagaatac ggaacgacct gttggggcgc agcatgctgc gccggcaggt tttccccaac
     3301 cactcaatcg gagaaccgga atcgcagcat gtaatacagc gccgcgacgc cgtctttcca
     3361 ggtgatcttc ttgccctgtt cgtaggtgcg gccatggtag gagatcggca cttcgtagaa
     3421 acggcagcgc ttcctggcga gtttgacggt gatctcgggt tcgaagccga atcgatcg
//
LOCUS       DATIRS010000517         1517 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_530499, whole genome shotgun sequence.
ACCESSION   DATIRS010000517 DATIRS010000000
VERSION     DATIRS010000517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1517
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_530499"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1086)
                     /locus_tag="VLM90_06500"
     CDS             complement(<1..1086)
                     /locus_tag="VLM90_06500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12647.1"
                     /translation="MIYFCCDQRRRNDLAGSAFNGIDYLEVLDHEIAQSDPANRQKKL
                     VVHFINDLAAGALDKPNILIEGGERVPGIFAINVAVDGQDAKLLNLELNQYGDFSIYT
                     FRLVQNPQNLAPPAIIDPLFAAVDFSFKVDCPSDFDCQPRCDCPAAPPEEPEINYLAK
                     DYASFRRLMLDRMAALMPQWRERNPADLGVALVEMLAYVGDHLSYQQDAVATEAYLGT
                     ARRRVSVRRHAKLVDYHMHDGCNARAWVQVRLQAGATATIAPGDTQFFTRIADQPTVL
                     PDDPQLRAQAQAIFEPMETVSLFADHNKFELYTWSDQRCCLPKGATHATLKDFHPDLK
                     PGHVVIFEEVLNPHTGGSEDADPKHRWA"
     gene            complement(1083..1451)
                     /locus_tag="VLM90_06505"
     CDS             complement(1083..1451)
                     /locus_tag="VLM90_06505"
                     /inference="COORDINATES: protein motif:HMM:NF016829.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HSQ12648.1"
                     /translation="MSQLDYPFHFDSRGRTAETGDDAHIRDLIEQVLFTAPGERVNRP
                     SFGSGLMQLVFAPNSDTLAATTQFLVQGALQQWLGDLIVVESVQVEADDGTLRVAIQY
                     LIRRTQSRQTAQFSRAGSGL"
BASE COUNT          301 a          462 c          464 g          290 t
ORIGIN      
        1 agcccaacga tgctttggat cggcatcctc gctcccgccg gtgtgaggat tgagcacctc
       61 ctcgaagatc accacatgac ccggcttgag atcagggtga aaatctttga gcgtcgcatg
      121 ggtcgcgccc ttgggtaaac agcagcgctg atcgctccac gtgtaaagct caaatttatt
      181 gtgatcggcg aacaggctga ccgtttccat cggctcgaag atcgcctgcg cctgggcgcg
      241 cagctgcggg tcatccggca gcaccgtggg ctggtcggca atccgcgtga agaactgcgt
      301 atccccaggc gcgatcgtcg cagtagcgcc cgcttgcaac cgcacctgca cccaggcgcg
      361 cgcgttgcag ccgtcatgca tatggtaatc gaccagcttg gcgtgacggc gcaccgagac
      421 gcgccggcgc gccgtgccga ggtaggcttc ggtcgccacc gcgtcttgct gatagctcaa
      481 atggtcgccg acataagcca acatttcgac caacgccacg ccgagatcgg cggggttgcg
      541 ctcgcgccac tgcggcatca gcgccgccat gcggtcgagc atcaagcggc gaaagctcgc
      601 atagtccttg gccagatagt tgatttccgg ctcctcgggc ggcgcggccg gacaatcgca
      661 gcgcggctgg caatcgaaat cgctcgggca gtcgaccttg aaagaaaaat ccacggcggc
      721 gaacagcgga tcgataatcg ccggcggcgc cagattctgt gggttttgca ccaggcgaaa
      781 agtatagatg gagaaatcgc cgtactgatt gagctcgaga ttcagcagtt tggcatcttg
      841 cccatcgacg gcgacattaa ttgcgaagat gccgggtaca cgctcgccgc cttcgataag
      901 aatgttcggc ttatcgagcg cgccggctgc caggtcattg atgaaatgga ccaccagttt
      961 tttctgccga ttggccggat cgctttgggc aatctcatgg tcgagcacct cgagataatc
     1021 gatgccgttg aaggcgctac cggccagatc gttgcgccgg cgctgatcgc agcaaaaata
     1081 aatcataggc cgctcccggc ccggctgaac tgggcggttt gccgcgactg cgtgcgccgt
     1141 atcaagtact gaatcgccac ccgcagcgtg ccgtcgtcgg cctcgacctg caccgattcg
     1201 acgacgatca gatcgccgag ccattgctgc agcgcgcctt ggacgagaaa ctgcgtggtc
     1261 gccgccaagg tatcgctgtt gggcgcgaac accagctgca tcaaaccgct gccgaagctg
     1321 ggccggttaa cgcgctcgcc cggcgcggtg aacagcacct gttcgatcaa gtcgcggata
     1381 tgggcgtcgt caccggtctc ggccgtgcgg cctcgcgaat cgaaatgaaa tggatagtcg
     1441 agctggctca tagtccactc actctggttt gcgtcaagat aatattcacc ggcgtgccgg
     1501 tgggcgcgca gatcgcc
//
LOCUS       DATIRS010000518         1509 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1023042, whole genome shotgun sequence.
ACCESSION   DATIRS010000518 DATIRS010000000
VERSION     DATIRS010000518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1023042"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(92..>1509)
                     /locus_tag="VLM90_06510"
     CDS             complement(92..>1509)
                     /locus_tag="VLM90_06510"
                     /inference="COORDINATES: protein motif:HMM:NF013974.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HSQ12649.1"
                     /translation="DLVQNTIALAAVLRLIGVEFKILEEILTLQFKRKGDTVVAENVG
                     VARAGYDYAAAQFKSLPVTLPNTGKRLAFFEGNQALAMGGAAAGVRFYCAYPMSPASG
                     VLHWMARHARQLDIMVRQVEDEIGVINMAIGAAHAGCRDMCATSGGGFALMTEGLGAA
                     AMMEIPVVCINVQRAGPATGVPTKTEQGDLWQVLGAGQGDYPRIIVAPTTIPDCFKTV
                     PKLFNLVDKFQCPGIILSDLLLSEGRSSVDPAELDFNVAIERGEVIGLNGATPPLNGG
                     YKRYEINDSGISPRALPGPLGFEHVVATDDHDEDGVLISDEYTNPHKRQAMHEKRMRK
                     MDSILPLLDAPKLWGAADAQVTLVGWGSTEGVVQEAIQKLADEEGIAANLLQIKWLVP
                     LHGEAIVSTLAKSKKTIIVENNYSGQFARYLRSETGIVADGHIRKYDGEPFMPHHIVD
                     GVKAILAGEAKQYVPVHEIMV"
BASE COUNT          301 a          473 c          412 g          323 t
ORIGIN      
        1 atcatcgctc cttttgatta tttcgggtta cgagttttac gtttcgagtt caacccgaaa
       61 cccggaacac gagactcgaa acaaggattt tttagaccat aatctcatgc accggcacat
      121 attgtttcgc ttcgccggcc aagatcgctt tcacaccgtc gacaatatga tgaggcatga
      181 acggttcgcc gtcatatttg cgaatatgac cgtcggcgac gatgccggtc tccgaccgta
      241 aataacgcgc gaactggccg ctatagttgt tctcgacgat gatggttttc ttgctctttg
      301 ccagagtcga aacgatcgct tcgccatgta acggcacgag ccatttaatc tggagaagat
      361 tagcggcgat gccctcctcg tcggcgagct tctggatcgc ctcttggacg accccttcgg
      421 tggagcccca cccgaccagc gtgacttgcg cgtcagcggc gccccagagc ttgggcgcat
      481 cgagtagcgg caaaatcgaa tccatcttgc gcatgcgttt ctcatgcatc gcctggcgct
      541 tatgcggatt ggtgtactcg tcgctgatca acacaccgtc ttcatcgtga tcgtcggtgg
      601 cgaccacatg ttcgaatccc agcgggcccg gcagcgcgcg cggcgagatg ccgctgtcgt
      661 tgatttcata acgcttgtag ccaccgttga gcggcggcgt ggcgccgttg aggccgatca
      721 cctcaccgcg ctcgatcgct acgttgaaat ccagctccgc cgggtcgacg ctcgatctgc
      781 cctcggagag aagtaaatcc gacaagatga taccggggca ctgaaactta tcgactaggt
      841 taaaaagttt cggtaccgtt ttgaaacaat ccgggatcgt cgtcggcgcc acgatgatgc
      901 gcggataatc tccttgcccc gcacccaaca cttgccacaa atcgccctgc tcggttttcg
      961 tcggcacgcc ggtggccggc ccggcgcgct gcacgttgat acagacaacg ggaatttcca
     1021 tcatcgccgc ggcgcccagt ccctcggtca tcaaagcgaa accgccgccg gaggtcgcgc
     1081 acatgtcgcg gcagccggcg tgggccgcgc cgatggccat attgatgacg ccgatctcgt
     1141 cctccacttg acgcaccatg atgtccaatt ggcgcgcgtg gcgcgccatc cagtgcaaca
     1201 cgccggaggc cgggctcatc ggataggcgc agtagaagcg cactcccgcc gccgcgccgc
     1261 ccatggccaa cgcctggttg ccttcgaaga acgcaagtct tttgccggta ttcggcagcg
     1321 tgaccggcaa ggacttgaat tgcgccgcgg cgtaatcgta accggcgcgc gccacgccga
     1381 cgttttccgc gaccaccgtg tcgcccttcc gtttgaactg caaggtaagt atctcttcga
     1441 gaattttaaa ttcgacgccg atcaaccgca gcaccgcggc caacgcaatc gtattctgca
     1501 ccaagtcgc
//
LOCUS       DATIRS010000519         1754 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_629666, whole genome shotgun sequence.
ACCESSION   DATIRS010000519 DATIRS010000000
VERSION     DATIRS010000519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1754)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1754)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1754
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_629666"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1389
                     /locus_tag="VLM90_06515"
     CDS             <1..1389
                     /locus_tag="VLM90_06515"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSQ12650.1"
                     /translation="LQTVTYEVPAYKFEGVRVFTNKPACGPKRGHGTPQPRFALEIQL
                     DEIAEKINIDPIELRLKQLVKPNSITVNGLRVSSTGLRECTERVAERAEWKKKFRQLP
                     FGHGVGFAASSYISGAGLPIYWNNMPHSGVQIKLDRSGGVAVFCGSIDIGQGSDSILA
                     YAVAEEFGIDPGDIRVLTADTDLTPVDLGSYSSRVTVMTGNAAIQACGKLKPLLLEAA
                     SEALEVPPDDLEFAEGKVRSASLRERGISFADAVVKAESKYGALGATGSYWPPKNPRD
                     FKGSGIGPTPAYSFTSSIVELHCDSATGEIKIDKIWIAHDCGRAFNPLLVEGQTEGSV
                     YMALGEALMEEQIFRKNGLHKIPSILEYKSPTTLETPEIETILVETIDPDGPYGAKEA
                     GQGPLLPVVPAVANALYDAIGVRIHEVPITPDKILRALDGRLKPTSIPDFKFPAPIKW
                     HPGDGVEVTQKS"
     gene            1571..>1754
                     /locus_tag="VLM90_06520"
     CDS             1571..>1754
                     /locus_tag="VLM90_06520"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HSQ12651.1"
                     /translation="MSELGPDAMLVAGGTDVYPKMKRGQFTPRHLISLRSLRELKGIR
                     QSKEGLWIGAGESLTAI"
BASE COUNT          385 a          514 c          523 g          332 t
ORIGIN      
        1 ctgcagacgg tgacctacga agtgccggct tataagttcg agggcgtgcg agtttttacc
       61 aataagccgg cctgcggacc gaagcgtggc cacggcacgc cgcagccgcg cttcgcgctg
      121 gagattcagc tcgatgaaat cgccgagaaa atcaacattg acccgatcga gttgcggcta
      181 aaacagctcg tcaagcccaa cagcatcacg gtgaacggtt tgcgcgtcag cagcacggga
      241 ctgcgcgaat gcaccgaacg cgtcgccgag cgcgccgagt ggaagaaaaa atttcgccag
      301 ctgccgttcg gccacggcgt tggcttcgcg gcgagctcct acatcagcgg cgcgggattg
      361 ccgatttatt ggaacaacat gcctcactcc ggcgtgcaga ttaagctcga ccgcagcggc
      421 ggcgtcgcgg ttttttgcgg ttccatcgac atcggccagg gatcggattc cattctggct
      481 tacgccgtgg ccgaggagtt tggcatcgac ccgggcgaca tccgggtgtt gaccgccgat
      541 accgatctca cgccggtgga tctcggcagc tattccagcc gcgtgaccgt gatgaccgga
      601 aacgcagcaa ttcaagcttg cggcaagctc aagcccctgc tcctcgaagc ggcgagcgaa
      661 gcgttggagg ttccgccgga cgatctcgaa tttgccgaag gcaaagttcg cagcgcaagc
      721 ctgcgggagc gcggcataag ctttgccgat gccgtagtca aggcggagag caaatacggc
      781 gcgctgggcg ccacgggcag ctattggccg cccaagaacc cgcgcgactt caaaggctcg
      841 ggcatcggcc ccacgccggc ctatagtttt acttcttcta tcgtcgagct gcactgcgac
      901 agcgccaccg gcgagattaa aatcgataaa atttggatcg cccacgactg cggccgcgcc
      961 ttcaatccgc tgctcgtcga aggtcaaacc gaaggcagtg tttacatggc tctcggcgag
     1021 gccttgatgg aagagcagat cttccgcaaa aacggtctgc ataaaattcc gtcgattctg
     1081 gaatacaaaa gtccgacgac gttggagacg ccggagattg aaacgatttt ggtcgagacc
     1141 atcgatcccg acggccccta cggcgccaag gaagccggcc agggtccgct cctgccggtg
     1201 gtcccggcgg ttgccaatgc gctctatgac gccatcggcg tgcgcattca tgaagtgccg
     1261 atcacgccgg acaagatcct gcgcgccctc gacggccggc tgaagccgac ttcgattccc
     1321 gactttaagt ttcccgcgcc gatcaagtgg catccgggcg atggtgtgga agtaacccag
     1381 aagagttgaa attatgtcac agaattccct caccctagcc ctctcccaac aggagcgggt
     1441 aaaagtctta ccctcgccct cgtaatcgag ggagagggaa gggtgagggt gcgggtatcg
     1501 agatatcatg cttcgactac cagaatttaa ttacgttcaa ccacggacgt tgcgccaagc
     1561 aacgaagaat ttgtctgaat taggcccgga tgccatgctg gtggccggcg gcacggacgt
     1621 ctatccgaaa atgaagcgcg ggcaattcac gccgcgtcat ctcatttcgc tccgatcgct
     1681 gcgtgagctt aaaggcattc gccagagcaa agaaggtcta tggatcggcg ccggcgaaag
     1741 ccttacggcg attg
//
LOCUS       DATIRS010000520         1756 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_137313, whole genome shotgun sequence.
ACCESSION   DATIRS010000520 DATIRS010000000
VERSION     DATIRS010000520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1756
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137313"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..251)
                     /locus_tag="VLM90_06525"
     CDS             complement(<1..251)
                     /locus_tag="VLM90_06525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12652.1"
                     /translation="MSDANYRMFSRHGNGAKRAESARVGPTDDTERGRRLSEARRLGE
                     AIAARAVGSGRTRLNERAPGDTGFVSMPEIRRVSMVPSK"
     gene            complement(248..1717)
                     /locus_tag="VLM90_06530"
     CDS             complement(248..1717)
                     /locus_tag="VLM90_06530"
                     /inference="COORDINATES: protein motif:HMM:NF016252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0009250 - glucan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucan biosynthesis protein G"
                     /protein_id="HSQ12653.1"
                     /translation="MLVVGLAPATSAANGQFGFDGVAEMAKKLAAEPFRAPKPIPEFL
                     TSLSYDDYRDIRFDTKQSFWRSAGNFQIQLIHPGLFYGHAVKINTIEGSGARPLPFSP
                     SLFTYGRNKFADKIPADLGFAGFRVTYPFFKQTDFNHVIVFAGASYFRAVAKGQGFGL
                     SARGLAIDTGLPGGEEFPFFKEFWLERPARDAREIKLYALLDSPSVTGAYAFVVQPGE
                     RTIVNVRTRLFLRKPVRELGIAPLTSMFLYGEERPRPADDWRPDVHDSDGLLMHSSSG
                     EWLWRPLGNPEKLRVSYFEFDNPRGFGLLQRDRQFKNYEDLETRLELRPNAWITPVGN
                     WGKGHVKLVEIPSRKETNDNIVSYWMPRSLPPIGQPFELAYRMHFQSNDPIAASSGRV
                     TAMRIGNGDREDWKRIVVDFEGENFKALPDSAPVKAVISVGQDGQLVQQSVFRNVVTQ
                     GWRLSFQIKAPKGKALELRAFLQQANNTLSETWSYQIEP"
BASE COUNT          357 a          530 c          498 g          371 t
ORIGIN      
        1 attttgctcg ggaccatcga gacccggcgt atctcgggca tcgaaacaaa gccagtgtcg
       61 ccgggtgccc gttcgttgag ccgcgtccgg ccgctgccga cggcgcgcgc ggcaatcgct
      121 tcgccgaggc gccgtgcttc cgacaatcgg cgccctcgtt cggtatcgtc cgtcggaccg
      181 acgcgcgcag attcggcgcg ctttgcgccg ttgccgtggc gcgaaaacat tcgatagttg
      241 gcgtcactca tggctcgatc tgataactcc aggtttcgct gagagtgtta ttggcctgct
      301 gaagaaaagc gcgcagctcg agcgccttac ccttcggcgc ttttatctgg aaactgaggc
      361 gccatccctg ggttacgacg ttgcggaaaa cgctttgctg cacgagctgg ccatcttggc
      421 ccacgctgat gactgctttc accggcgccg aatcgggtag cgccttgaaa ttttctccct
      481 cgaaatccac gacgattctc ttccagtctt ctcgatcgcc gttgccgata cgcatcgcgg
      541 tcacgcgccc ggaactggca gcaataggat cgttgctttg aaaatgcatt cgataggcca
      601 gctcgaacgg ctgcccgatc ggcggtagcg agcgcggcat ccagtacgac acaatgttgt
      661 cgttggtctc cttgcggctc ggtatctcga ccagcttcac gtgccccttg ccccaattgc
      721 cgaccggtgt gatccaggcg ttcgggcgca gctcaaggcg cgtttccaag tcttcgtaat
      781 ttttgaactg gcggtcgcgc tgcaacaacc caaagccgcg cgggttgtcg aattcgaagt
      841 agctgacgcg cagtttttcc ggattgccca acggacgcca gagccactcg ccgctgctcg
      901 aatgcatcaa caagccgtct gaatcgtgca cgtccggacg ccagtcatcc gccggtcggg
      961 gcctttcctc gccgtagaga aacatgctcg tcagcggcgc gatgccgagt tcccttaccg
     1021 gtttgcgcag aaacagtcgg gtccggacat tcacgatggt ccgttccccg ggctgaacga
     1081 cgaaggcata cgctcccgtc acactcggac tgtcgagcaa cgcgtacaat ttgatttcgc
     1141 gagcgtcgcg cgcgggccgc tccaaccaga attctttaaa aaacggaaac tcctcgccgc
     1201 ccggcaggcc ggtatcgatc gccagcccgc gcgcggatag accgaatccc tgccccttgg
     1261 ccaccgctcg gaaataactg gcgccggcga agacgatcac atgattgaaa tcggtctgtt
     1321 taaaaaatgg ataggtgacg cgaaaaccgg caaagcctaa atcggcggga atcttgtcgg
     1381 cgaatttatt tcttccgtag gtgaataagc ttggcgagaa cggcaatggc cgcgcgccgc
     1441 tcccctcgat ggtattgatc ttgacggcat ggccgtaaaa caagccggga tgaatcaatt
     1501 gaatctgaaa gttgccggcc gatctccaga aagactgctt cgtatcgaat cgtatgtcgc
     1561 ggtagtcgtc gtaggaaagc gacgtcagga attccggaat cggttttggc gcgcgaaagg
     1621 gctctgctgc cagtttttta gccatctccg caacgccgtc aaaaccaaat tggccattgg
     1681 cggcgcttgt cgccggtgcc agcccgacga cgagcacaaa aataatttta agtagtgacc
     1741 gcaaagcacg ctccgc
//
LOCUS       DATIRS010000521         2420 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1219730, whole genome shotgun sequence.
ACCESSION   DATIRS010000521 DATIRS010000000
VERSION     DATIRS010000521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2420
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1219730"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..211
                     /locus_tag="VLM90_06535"
     CDS             <1..211
                     /locus_tag="VLM90_06535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12654.1"
                     /translation="MRGRTTLLISHRISTVRDADMIVYLSGGKIIEQGSHDDLLAKRG
                     AYYELYRRQSLAREVEKLAHGEERL"
     gene            208..2031
                     /locus_tag="VLM90_06540"
     CDS             208..2031
                     /locus_tag="VLM90_06540"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ12655.1"
                     /translation="MIGEANPEEEILGKAYDGRLMMRILRYLRPYWKLLAISFVFLML
                     QTGAQLLGPYLTKIAIDRSIAQRDIEGLDLMALAYLGVVLFGFVVLFIQTYATEYTGQ
                     RAMQDLRMEVFSHLQKQDLAYFDRNPVGRLMTRTINDVETLNELFSTGVVGLLGDVSI
                     VFGIAIVMFWLDWQLALVCLAAFPVILYISRFYRRRAREVYRESRLILGRLNAGLQEN
                     LAGVATIQAFGQEDKMYRRFQDVNLYYRNILLRSIRYNAVFFPVIELFSALSVGLLLW
                     YGGQLVLANAVQAGVLVAFIQYIQRMYQPIRDLAEKYNIMQAAMASSERIFALLDTPE
                     TIKNPSQPKQVTKVSGEVEFKDVWLSYAPGDPVLKGISFHVRPGEKVALVGATGGGKT
                     SIISALCRFYDIERGAILVDGIDIREWDKQELRRHLGLVLQDVFLFSGDIATNITLGD
                     PRIGEGQMLQAAQRAQIEPFIQKLPGGYGEEVQERGSTFSQGQRQLLSFARALAFDPK
                     ILILDEATSSVDTQTEMLIQEALDELLKNRTALIIAHRLSTIRHADRILVIHKGEIWE
                     DGSHEELLARDGLYARLYDLQYRFQERDDRIADAAAMRSET"
     gene            complement(2076..>2420)
                     /locus_tag="VLM90_06545"
     CDS             complement(2076..>2420)
                     /locus_tag="VLM90_06545"
                     /inference="COORDINATES: protein motif:HMM:NF019040.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1501 domain-containing protein"
                     /protein_id="HSQ12656.1"
                     /translation="GIAAFYQDLGDQMEDVVLITMSEFGRTARENGNRGTDHGHANVM
                     FVIGGAVRGGKVYGRWPGLAPEVLYEGRDLDLTTDYRTVCGEVLARHLAQRELARIFP
                     GFRSSTSLGLVA"
BASE COUNT          504 a          707 c          702 g          507 t
ORIGIN      
        1 catgcgcggc cggacgacct tgctgatctc gcaccgcatc tcgacggtgc gcgacgccga
       61 catgatcgtc tatctcagcg gcggcaaaat catcgagcaa ggcagccacg atgacttgct
      121 cgccaagcgc ggcgcctact atgagcttta ccgtcggcag agcctggcgc gtgaagtcga
      181 gaagctggcg cacggcgagg agcggctgtg atcggcgaag caaacccgga agaagagatc
      241 ctggggaaag cctacgacgg ccggctgatg atgcgcatcc tgcgctacct ccggccttat
      301 tggaagctgc tggcgatatc cttcgtgttt ctgatgctgc agaccggcgc gcagcttttg
      361 ggcccttatc ttaccaagat cgccatcgac cgctccatcg cccaacggga catcgagggg
      421 ctcgacttga tggcgctcgc ctatctaggg gtggtgcttt tcggcttcgt cgtgctgttt
      481 atccaaacct acgccacgga gtacactggc cagcgcgcca tgcaagatct gcgcatggag
      541 gttttttccc atctgcagaa gcaagacctg gcctattttg atcgcaaccc cgtcggccgg
      601 ctcatgaccc gcacgatcaa tgacgtggaa accctcaacg aactgttcag caccggcgtc
      661 gtgggattat tgggcgacgt gtcgattgtt ttcggcatcg cgatcgtaat gttctggctc
      721 gattggcaac tggcgctggt ctgcctcgcg gcattcccgg tgattctcta tatcagccgc
      781 ttttaccgcc gccgcgcgcg cgaagtctac cgcgagagcc ggctgatcct cggacggctc
      841 aacgccggtt tgcaggaaaa cctggccggc gtggcgacca ttcaagcctt cgggcaggaa
      901 gataaaatgt accggcgttt tcaggatgta aatttgtatt accgcaacat cttgctgcgc
      961 agcatccgct acaacgcggt gttttttccg gtgatcgaac tgttcagcgc gctgagcgtc
     1021 ggcttgctgt tatggtacgg tggtcaactg gttctcgcca atgccgtgca ggcgggcgtg
     1081 ctggtggcgt tcattcaata tatccagcgc atgtaccagc cgattcgcga cctggcggag
     1141 aaatacaata tcatgcaagc cgctatggct tcgtccgagc gcattttcgc tctgctcgat
     1201 acaccggaaa cgatcaaaaa cccaagccaa ccgaaacagg tcacgaaagt ctccggtgaa
     1261 gtagagttta aagatgtctg gctttcctac gcgccgggcg accccgtact caagggaata
     1321 tcgtttcacg tgcgcccagg ggaaaaagtc gcgctggtcg gcgccacggg cggcggcaag
     1381 acctcgatca tctcggcgct gtgccgcttt tacgacatcg agcgcggcgc gatcctggtc
     1441 gacggcatcg acattcgcga gtgggacaaa caagagctgc gccgccatct cggcttggtc
     1501 ttgcaggacg tgtttctttt ttccggcgat atcgcgacca acattactct aggcgatccg
     1561 cgcatcggcg aaggccaaat gttgcaagcg gcgcagcgtg cgcagatcga gccgttcatt
     1621 caaaaattgc cgggcggata tggcgaagaa gttcaggagc gcggttcgac gttttcccag
     1681 ggacagcgcc agctcttgtc tttcgcccgc gcgctggcgt tcgacccgaa aattctgatt
     1741 cttgatgaag ccacgagttc ggtcgacaca cagaccgaaa tgttgattca agaggctctc
     1801 gatgagctgc tcaagaaccg caccgcgctg atcatcgcgc accgtttatc gacgatccgg
     1861 cacgccgacc gtattctggt cattcacaag ggcgagattt gggaggacgg cagccacgag
     1921 gaactcttgg cgcgcgacgg actatatgcg cgcttgtacg atctgcaata tcgttttcaa
     1981 gaacgcgacg acagaatcgc ggatgcggcc gcgatgagat cggaaacgta aggcacggca
     2041 tgcgacctta ctgaagttgc gaaaaaattg gcccactaag cgaccagtcc taaagatgtc
     2101 gacgaacgaa accccgggaa aattctcgcc agttcgcgct gcgcgagatg gcgcgccagc
     2161 acttcaccgc acacggttcg atagtccgtg gtcaaatcga gatcgcgtcc ttcatataac
     2221 acttccggtg cgagacccgg ccagcggccg tagactttgc cgccgcgcac ggcgccgccg
     2281 atgacaaaca tgacattggc gtggccgtga tcggtgccgc ggttgccgtt ttcccgcgcc
     2341 gtgcggccaa attccgacat ggttatgagc accacatctt ccatctggtc gccgaggtct
     2401 tgatagaagg cagcgatacc
//
LOCUS       DATIRS010000522         4513 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_39120, whole genome shotgun sequence.
ACCESSION   DATIRS010000522 DATIRS010000000
VERSION     DATIRS010000522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4513
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39120"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(146..850)
                     /locus_tag="VLM90_06550"
     CDS             complement(146..850)
                     /locus_tag="VLM90_06550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12657.1"
                     /translation="MTTEPREVADLIAALDHPDKPTIRAAVDKLIALAETSETLRQAL
                     HNRLSEASHRNYWPVAYILGHQARPSGLVISTLLDALDHREPDIRWANGLLLVRIAHQ
                     VGAVIPLLIELCETGSAHQKRMALYCLRDLALNDAESRLAMLTALDDKEPTVRVAAAT
                     SLKVRTDVDSAVRQKLLATYLNDADDRVKNVIAVTLASLGSPDEEFMLALNEASRSGN
                     GQIKKSADAALKILQK"
     gene            complement(882..2075)
                     /locus_tag="VLM90_06555"
     CDS             complement(882..2075)
                     /locus_tag="VLM90_06555"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HSQ12658.1"
                     /translation="MFEAKAKRPTPSSGSAPQPIQLKPNQAILLYAASEGDANMLYAT
                     GFFVPDPFIFFQNKNHRHIVMSDLEIDRAKKQAHADRILSLSLYQKKLRKLGKSPAAV
                     IDIVDLIFRERAIRALIVPANFSALLLDQLRAKGYRVQINRDPFWPQRETKNNLEVKQ
                     ITESLRIARLGLEAGIRMLKRTTTKRDGYLYLNGTRLTSEMLKTAVNTTIMAQGWLPS
                     HTIISSGNQCVDPHHEGTGPIRANTSIIFDIFPRSQHNGYFGDLSRTVVRGRASEKLK
                     EIYATVQAGQQIGYAQIRDGVNGKEVHQNILNMFAARGFPTGRINGRMQGFFHGTGHG
                     LGLDIHEPPRIAPIDAVLRTGHVVTVEPGLYYIGVGGVRLEDVVVVKPKGNRNLTDCP
                     QFLEI"
     gene            2267..3817
                     /locus_tag="VLM90_06560"
     CDS             2267..3817
                     /locus_tag="VLM90_06560"
                     /inference="COORDINATES: protein motif:HMM:NF013225.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HSQ12659.1"
                     /translation="MTIANNLDKLRELNDKAEGGGGAERARRQHEQGKLLARERLDLL
                     LDGGSFVEIDRLRTHHSTDFGLDKQKFFGDAVVTGYGAIDGRLVYVYSQDFTVFGGSL
                     SRVVADKICKVMDMAIKNGAPLIGINDSGGARIQEGVDSLAGYGDIFQRNVMASGVVP
                     QITAIMGPCAGGAVYSPAITDFIFMIKTNSYMFITGPDVIRTVTHEEVTKEDLGGAET
                     HTGKSGVAHFTANTEKDCLLMIRELISFLPSNNQEDPPFRPTNDDPLRRDKRLKDIIP
                     DNPNRPYDMKELIGAVVDEGYFYEVQPEFARNILIGFAHIGGRSIGIVANQPNHLAGC
                     LDINASVKAARFIRFCDCFNFPIVTFVDVPGFLPGTEQEYHGIIRHGAKVLYAYAEAT
                     VPKVTIVTRKAYGGGYIVMASKHLRGDVNLVYPTGEIAVMGPEGAINIVFRGELEKSA
                     DPAKARDELVNHYRETFANPFKAAESGYVDGIVYPEDTRPTLIRALEMLKNKQDHNPP
                     KKHGNIPL"
     gene            3934..>4513
                     /locus_tag="VLM90_06565"
     CDS             3934..>4513
                     /locus_tag="VLM90_06565"
                     /inference="COORDINATES: protein motif:HMM:NF012510.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HSQ12660.1"
                     /translation="MFKRILIANRGEIAVRIARACRELDIESIAVYSEADRESLHVKY
                     ADYAYAIGPAPSAQSYLVIDSIIDVCKKSGAEAVHPGYGFLAENARFAQRCKDEGIVF
                     IGPSPEVIDQMGDKVKARQIMKAAGVPVVPGSDGILTSEEEVLQTMESIGYPCMLKAV
                     AGGGGKGLRLVRLRREVSSAYRAVGSEAKSSFG"
BASE COUNT          910 a         1258 c         1340 g         1005 t
ORIGIN      
        1 aagtactggc tgtgaggtgg ctgagactta ggctctaggc ggcgactctg aatggagatt
       61 cgggcctaga gcctgagaat ctccctcagc caccgcagtg gcccgctgca ccggtcgcgc
      121 aagctgccga gtgtggcggg cctttttatt tttgcagtat cttaagtgcc gcgtcggcgc
      181 tcttcttgat ctggccattg ccgctccggc tcgcttcgtt caacgccagc ataaattctt
      241 catccggcga ccctagacta gccagggtta cggcgattac gttcttcacg cggtcgtcgg
      301 catcattcaa ataagtcgct agcagctttt gccgaacggc gctatcgaca tcggttctca
      361 ctttcagact ggttgcggcg gcgacgcgga ctgtcggttc tttgtcgtcc aacgccgtca
      421 acattgctag ccgactttct gcatcgttca aagctaagtc gcgcagacag tagagcgcca
      481 tgcgtttctg gtgcgcgctg ccggtttcac acagctcgat cagcaacgga atcacggcac
      541 cgacctggtg ggcgatgcgc acgagcaata gaccgttggc ccagcggata tccggttcgc
      601 ggtggtcgag ggcgtcgagc agcgtgctaa tcacaagtcc cgaaggccgg gcttgatggc
      661 cgagaatgta ggcgaccggc caatagtttc tgtggctcgc ttcgctgagg cgattgtgga
      721 gtgcttgtct gagagtttcg gaagtctcgg ccaacgcgat tagcttatcg acggcggcgc
      781 ggatcgtcgg cttgtcggga tgatcgaggg cggcgatgag atcggcaacc tcgcgtggct
      841 cggtggtcat gagcgaactc caaagcgaga agttagccga tttagatttc taaaaactgc
      901 gggcaatcgg tgaggttgcg attgcctttg ggcttgacca cgacgacatc ttccagtctg
      961 acgccgccga cgccgatgta atagagtccc ggttccacgg tgaccacatg gccagtgcgc
     1021 aggactgcgt caatcggggc gatgcgcggc ggctcgtgaa tatccaaacc caggccatga
     1081 ccggtgccgt gaaagaatcc ctgcatgcgg ccgttgattc tcccagtcgg gaagccgcgc
     1141 gcggcgaaca tgttcaaaat gttctggtgc acttccttgc cgttgacgcc gtcgcggatc
     1201 tgcgcgtagc caatctgctg gccggcttgg accgtggcgt agatctcttt tagtttttcc
     1261 gacgcccggc cgcgcaccac ggtgcggctc aaatcgccga aataaccatt gtgttgggag
     1321 cgcggaaaga tatcgaagat gatcgaggta ttcgcccgaa ttggacccgt gccttcatgg
     1381 tgcggatcga cgcattggtt gcccgacgag atgatcgtgt gactcggcag ccagccttgc
     1441 gccatgatcg tggtgttgac tgcggtcttg agcatttcgg atgtcagccg cgtgccgttg
     1501 aggtagagat agccgtcgcg tttggtagtc gtccgtttga gcatgcggat gccggcttcc
     1561 aggccgagcc gggcgatgcg cagggattcg gtgatctgtt ttacttcgag attattctta
     1621 gtctcgcgct ggggccagaa ggggtcgcga ttgatctgca cgcggtagcc cttggcgcgc
     1681 agctggtcca acagaagcgc ggagaagttc gccggcacga tcagcgcgcg aatggcgcgc
     1741 tcgcggaaaa tcaaatcaac gatgtcgatg accgccgccg gcgacttgcc gagcttgcgc
     1801 agcttcttct gatacaggga cagggacaga atccggtcgg catgggcttg cttcttggcg
     1861 cgatcgatct ccaaatcgct catgacgatg tggcgatggt tcttgttctg aaaaaaaata
     1921 aacggatcgg gcacgaagaa accggtggcg taaagcatgt tggcgtcgcc ttcgctggcg
     1981 gcgtaaagca gaatcgcctg gttcggtttg agttggatcg gttgcggcgc ggagccgctc
     2041 gatggtgttg gtcgctttgc cttcgcttcg aacatgatgc ttgatcgcct cgattcgcgt
     2101 tggttatgat tttcagcagc tcaatcacgc taacaattta gctctggaac tgcaagtttt
     2161 tcctcgtgaa ttcgcgcgtt tcggttgaca gcccaagggc ttttgttatg atgccgcgac
     2221 tcgctggcga aactattttg ctttcgcgcc taaggaattt ctctcgatga cgatcgctaa
     2281 caatctcgac aaactccgcg aacttaacga caaggccgaa ggtggcggtg gcgccgaacg
     2341 cgcccgccgc cagcatgaac agggtaaact tctggcgcgc gagcgtctcg accttctttt
     2401 ggatggtggc agtttcgtcg agatcgaccg cctgcgcacg caccacagca ccgacttcgg
     2461 tctcgataaa caaaaatttt tcggcgatgc cgtggtcacc ggttatggcg ccatcgacgg
     2521 ccggctcgtc tatgtctact cgcaggattt cactgttttt ggcggcagcc tgagccgtgt
     2581 ggtcgccgac aagatctgca aggtcatgga catggcgatc aagaacggcg cgccgctgat
     2641 cggcatcaac gactccggcg gcgcgcgcat tcaagaaggc gtcgatagtc ttgccggtta
     2701 cggcgatatc ttccaacgca acgtcatggc gtcgggtgtg gtgccgcaga tcaccgcgat
     2761 catgggcccg tgcgccggcg gcgcagtcta ttcgccggcg atcaccgatt ttattttcat
     2821 gatcaagacc aacagctaca tgttcatcac cggtccggac gtgattagaa cggtgaccca
     2881 tgaagaggtg actaaagaag acttgggcgg cgcggagacg cataccggca aaagcggcgt
     2941 ggcgcatttt accgccaata ccgaaaagga ctgcttgctg atgatccgcg agctgatcag
     3001 ttttttgccc agcaacaatc aggaagatcc gccgtttcgg ccgaccaacg acgatccgct
     3061 acggcgcgac aagcgactca aagatatcat ccccgataat cccaaccgcc cctacgacat
     3121 gaaagagttg atcggcgcgg tggtggatga aggttatttc tacgaagtcc aaccggaatt
     3181 cgcgcgcaat attctgatcg gcttcgctca tatcggcggc cgctccatcg gcattgtcgc
     3241 caatcagccg aatcacttgg ccggctgtct cgacatcaat gcctcggtga aggcggcgcg
     3301 ctttatccgt ttctgcgact gtttcaattt tcccatcgtt acgtttgtcg atgtgccggg
     3361 tttcctgccc ggcaccgagc aggaatatca tggcatcatt cgccatggcg cgaaggtgct
     3421 ttacgcttat gccgaagcga cggtgccgaa agtcaccatc gtcacgcgca aggcttacgg
     3481 cggcggctac atcgtcatgg cgagcaagca tctgcgcggc gatgttaact tggtttatcc
     3541 caccggcgag atcgccgtca tggggccgga aggggcgatc aacatcgtct tccgcggtga
     3601 attggagaag tcggccgacc cggccaaggc ccgcgacgag ctggtcaacc attatcgcga
     3661 gaccttcgcc aatccattca aagccgccga gtcaggctat gtggacggca tcgtctatcc
     3721 tgaggacacc cggccgacct tgatccgcgc cttggaaatg ctcaagaaca agcaagatca
     3781 caatcccccc aaaaagcatg ggaatattcc actgtagaat gagatgcgag acagagatta
     3841 gagacagaga ccggatcaag aggctcggcg aactcaattc tctatcttta ttctctatct
     3901 caaatctcta tctccaatct ctgtctgccg tccatgttta aacgaatcct catcgccaat
     3961 cgcggcgaga tcgccgtgcg catcgcgcgc gcctgccgcg agctcgatat cgaatcgatt
     4021 gcggtctatt cggaagccga ccgcgagtcg ttgcatgtca aatacgccga ttacgcctac
     4081 gcgattggcc cggcgccgtc tgcgcagagt tatctggtca tcgacagtat tatcgatgtc
     4141 tgcaagaaaa gcggcgccga ggcggtgcac cccggttatg gttttctggc ggagaatgcc
     4201 aggttcgcgc aacgctgcaa agatgaaggc atcgtcttca tcggtccctc tcccgaagtc
     4261 atcgatcaga tgggcgataa agtcaaagcg cgccagatca tgaaagcggc cggcgtgccg
     4321 gtggtgcccg gttcggacgg cattcttacc tccgaagaag aagtgctcca gaccatggaa
     4381 tcgatcggct atccctgcat gttgaaggcg gtggccggcg gcggcggcaa ggggctcagg
     4441 ctggtgcgct tacggcgcga ggtgtcgtcg gcctatcgcg ccgttggttc cgaagccaag
     4501 tcttccttcg gcg
//
LOCUS       DATIRS010000523         3418 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_137448, whole genome shotgun sequence.
ACCESSION   DATIRS010000523 DATIRS010000000
VERSION     DATIRS010000523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3418)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3418)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3418
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137448"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..729
                     /gene="trpD"
                     /locus_tag="VLM90_06570"
     CDS             <1..729
                     /gene="trpD"
                     /locus_tag="VLM90_06570"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR01245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HSQ12661.1"
                     /translation="AFVVAGAGVTVAKHGNRSVSSQSGSADVLGTLGVKVDAPRERVE
                     QCIAQIGIGFLFAPLLHEAMKYAVQPRRDIGIRTIFNLLGPLTNPAMATHQLIGIYSG
                     ELVGLVANVLKNLGSARAMVVHGLEGLDEISLCGPTKIAELRDGAVKEFQIEPEQFGL
                     KRCLLADLHGGSAEESAVIVHAVLDGNSGAPRDVVLFNSGAALYVSGSAATLADGIKL
                     AAESIDSGKAGQKLQQLVELTNAA"
     gene            737..1513
                     /gene="trpC"
                     /locus_tag="VLM90_06575"
     CDS             737..1513
                     /gene="trpC"
                     /locus_tag="VLM90_06575"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: protein motif:HMM:NF001377.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HSQ12662.1"
                     /translation="MAEILATIAAHVREVVAMRQRALPLAALRDRSLYHAPTRGFAKA
                     LNGNQRRIVAEVKKASPSKGLIRASFDAVAIAKDYASHGASAISVLTEERFFQGDLAY
                     LEQIHASVAVPVLRKDFMLDPYQIVEAKSFGADAVLFIAAMLDGHFMAELRQQASALQ
                     MDSLVEVHSENELEAALNAGAQLIGINNRDLKTFAVSLATTEKLAPLVPAGTPVVCES
                     GIDSIEQIRRVEKLGIHAFLIGESLMRAPAPGKKLRELLT"
     gene            1556..2182
                     /locus_tag="VLM90_06580"
     CDS             1556..2182
                     /locus_tag="VLM90_06580"
                     /inference="COORDINATES: protein motif:HMM:NF012900.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HSQ12663.1"
                     /translation="MVTIKVCGITNLADAEKSLEFGADILGFNFYPPSPRCIAPAKAR
                     EIIACLPRDSFNVALFVNEPKARVNEVLAAGRLPDGRQAYRGLQFHGEEDGAYCQDWV
                     FKVIKAFRIKEQASLVALKGFPADYYLLDSFSAGFGGSGQMFPWEWLGGIDSSKIILS
                     GGLRADNVALAIAKIHPFGVDVCSGVEARPGIKDHGKLKEFIVAAKGT"
     gene            2139..3359
                     /gene="trpB"
                     /locus_tag="VLM90_06585"
     CDS             2139..3359
                     /gene="trpB"
                     /locus_tag="VLM90_06585"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR00263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HSQ12664.1"
                     /translation="MANSKNLSLLPKVPDRRGHFGPYGGRYVAETLMPALTELERGYA
                     QVRRDAGFKRELAYYLKEYVGRETPLYFAERLTRSLGGATVYLKREDLCHTGAHKINN
                     TMGQILLARHMGKRRIIAETGAGQHGVATATVAARFGMECEIFMGAEDVQRQSLNVFR
                     MKLLGAKVRVVESGSQTLKDAMNDALRDWVTNVRSTYYLIGSVAGPHPYPMMVRDFQS
                     IIGREARRQILGKEGRLPDYLVACVGGGSNSMGLFFPFVKDRAVKMLGVEAAGLGLGS
                     GKHSATIQRGAVGVLHGSKSYLLQDDKGQVKETHSVAAGLDYPGVGPELSYLRDYGRV
                     QFDAATDDEAIASIQYLAQVEGIIPALESAHAIAVVRRLAPKLKKRQIIIVNLSGRGD
                     KDMTTVGDYLGAKL"
BASE COUNT          697 a          960 c         1060 g          701 t
ORIGIN      
        1 gctttcgtgg tcgccggcgc cggtgtcact gtcgccaagc atggcaatcg ttcggtgtcg
       61 agccagtcgg gcagcgccga tgtcttgggg acgttgggag tcaaggtcga tgcgccgaga
      121 gagcgggtcg agcagtgcat cgcccagatc ggtatcggtt tcctgtttgc gccactgctc
      181 catgaagcga tgaagtacgc cgtgcagccg cgccgcgaca tcggcattcg caccatcttt
      241 aatttactcg ggccgctgac caacccggcc atggcgaccc accagctgat cggcatctac
      301 agcggcgagt tggttggcct ggtcgccaac gtgctgaaaa atctcggcag cgcacgggcg
      361 atggttgttc atggtctcga aggcttggat gaaatttctt tgtgcgggcc gaccaaaatc
      421 gccgagctgc gcgatggggc ggtgaaagag ttccaaatcg aacctgagca gttcggactc
      481 aaacgttgcc tgctcgccga ccttcatggt ggcagcgctg aggagagcgc ggtgatcgtc
      541 cacgccgtgc tcgacggcaa ttccggcgcg ccgcgcgatg tcgtgctctt caacagcggg
      601 gcggcgcttt acgtcagcgg cagcgccgcg actctggcgg atggtatcaa actcgctgcg
      661 gaatctatcg atagcggtaa ggcaggccaa aagctccaac aactggtcga gttgaccaac
      721 gccgcatagt taagtcatgg ctgaaattct ggccaccatc gccgcccatg tgcgtgaagt
      781 cgttgcaatg cgccagcgcg ccctgccatt ggcggcgctg cgcgatcgat cgctttacca
      841 tgcgccgacg cgcggctttg ccaaggcgct caacggcaac cagcggcgaa ttgttgccga
      901 ggtcaagaaa gcctcgccgt ccaaggggct aattcgcgcc agtttcgatg cggttgcgat
      961 tgccaaggat tatgcgagcc atggcgccag tgcgatttcg gtgttgaccg aggagcgctt
     1021 ttttcagggc gacctggctt atctcgaaca gattcacgcc agcgtggcgg tgccggtgtt
     1081 gcgcaaggat ttcatgctcg atccctatca aatcgtcgaa gcgaagagct tcggcgccga
     1141 tgcggtgctg ttcatcgcgg ccatgcttga cggccatttc atggccgagc tgcgtcaaca
     1201 agccagcgca ttgcagatgg attctctggt ggaagtgcat agtgaaaacg agctggaagc
     1261 ggccttaaac gccggcgcgc agttgatcgg catcaacaat cgcgatctca agactttcgc
     1321 cgtaagcttg gcgacgacag aaaaattggc gccgctagtg ccggcgggaa cgccggtggt
     1381 atgcgaaagc ggcattgaca gcatcgagca gatccgccgg gtcgaaaaac tcggcatcca
     1441 cgcgttcctg atcggcgagt cgctgatgcg cgcgcccgcg ccggggaaaa aattgaggga
     1501 actcttaaca tgactcgttt tatgcctaag cacgattctc gagcatgagc acgacatggt
     1561 cacgatcaaa gtttgcggca ttaccaatct cgccgacgcc gagaagtcgc tggagtttgg
     1621 cgcggatatt ctaggcttta atttttatcc gccgagcccg cgctgcatcg cgccggcaaa
     1681 ggcccgggaa atcatcgcgt gcttgccgcg cgattcgttc aatgtggcgc tgtttgtcaa
     1741 cgagccgaaa gcgcgggtca acgaagtgtt ggctgcagga cgattgccgg atggacggca
     1801 agcgtatcgt ggcttgcaat ttcacggcga ggaggatggc gcttactgtc aagactgggt
     1861 gttcaaagtg atcaaagcct ttcgcatcaa agagcaagct tcgctcgtcg ccttgaaagg
     1921 attcccggca gattactatt tgctcgattc cttttctgcg gggttcggcg gttcgggtca
     1981 gatgttccca tgggaatggt tgggtggcat cgacagcagt aagattattc tttcgggcgg
     2041 gctgcgagcc gacaatgtcg ccctggcgat cgccaagatt cacccgtttg gagtcgatgt
     2101 gtgcagtggc gtggaggcgc gcccagggat taaagatcat ggcaaactca aagaatttat
     2161 cgttgctgcc aaaggtacct gaccggcgcg gccatttcgg tccctacggc ggccgttacg
     2221 ttgctgaaac cctcatgccc gctttgaccg agctcgagcg cggttacgcg caggtgcggc
     2281 gtgacgccgg cttcaagcgc gagctcgcgt attatctcaa agaatatgtc ggccgggaaa
     2341 cgccgctcta tttcgccgaa agattgaccc gcagcctggg cggcgcgacg gtctatctca
     2401 agcgcgagga tctgtgccac accggcgcgc ataagatcaa caacaccatg gggcaaattc
     2461 tcttggcccg gcacatgggc aagcggcgta ttattgctga gaccggcgcc ggccagcatg
     2521 gcgtggccac tgccaccgtg gcggcgcgct tcggcatgga gtgcgagatc ttcatgggcg
     2581 cggaagatgt ccagcgccag tcgctcaacg tctttcgtat gaaactgctg ggcgccaaag
     2641 tgcgcgtggt cgaatccggc agtcaaaccc taaaggacgc catgaacgac gcgctgcgag
     2701 actgggtgac caacgtgcgc agcacctatt atctcattgg ctcggtggcc gggccgcatc
     2761 cctatcccat gatggtgcgg gatttccaat cgatcatcgg ccgcgaggcg cgccggcaga
     2821 ttctcggcaa agaaggccgg ttgccggatt atctggtcgc ctgtgtcggc ggcggcagca
     2881 attccatggg gttatttttc cccttcgtca aagaccgggc agtaaagatg ctcggcgtag
     2941 aagctgccgg ccttgggctg ggttccggta aacactcggc gaccatccaa cgcggtgccg
     3001 tgggggtttt gcacggcagc aagagttatc tcttgcaaga cgacaagggc caagtgaagg
     3061 aaacccactc ggtggcggca ggcttggatt atcccggcgt cggccctgaa ctgagttatc
     3121 tgcgcgacta cggccgggtg caattcgacg cggccaccga cgacgaagcg atcgcctcga
     3181 tccagtatct ggctcaagtc gaagggatca ttcccgcgtt ggaaagcgcc catgccatcg
     3241 cggtcgtccg gcgcttggcg ccgaaactga agaagcgcca aatcataatt gtcaacctgt
     3301 ccggccgcgg cgataaggac atgaccaccg tcggcgatta tctcggagcg aaattatagg
     3361 aatggttcaa aagtttagag gttcaaacgt tcaacgaccg ctcccatcct ccgaaacc
//
LOCUS       DATIRS010000524         2531 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_137455, whole genome shotgun sequence.
ACCESSION   DATIRS010000524 DATIRS010000000
VERSION     DATIRS010000524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2531
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137455"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1182
                     /locus_tag="VLM90_06590"
     CDS             <1..1182
                     /locus_tag="VLM90_06590"
                     /inference="COORDINATES: protein motif:HMM:TIGR02123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter fused permease subunit"
                     /protein_id="HSQ12665.1"
                     /translation="TKGPITIPLMKRAGFPPHIAGAVEAAASTGAAIMPPVMGAGAFV
                     MSEMTGIPYVDIIKVATIPGILYFLSVGVMVYFESRKLGLRGLPAEELPRTREVWGRG
                     WYLFLPIAVLIGALMTGYSPQHAALYGMASTIAVSWIRKETRMGVPQIWQALVDAGKN
                     CLFVAALTGCVGVLIGVLSLTGIVIRFPYMLVELAGQSVLITIALIACATLVLGLPLP
                     ITATYLIVAVIAVPALIKLGVPMLSAHLLIFWLSLDSNITPPVAMGPFAAAAIAQADP
                     MKTGWACFRFAKIIYVMPLLFAYTHILLTGTPAENIGAIASATLGTVLFSIMSTGCFY
                     LRTKFLEWILLAIATVLAFIPTFATGIAALTLFVAVFMWQRRRAVTLVPTNPQIEIAA
                     K"
     gene            1179..1475
                     /locus_tag="VLM90_06595"
     CDS             1179..1475
                     /locus_tag="VLM90_06595"
                     /inference="COORDINATES: protein motif:HMM:NF013844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HSQ12666.1"
                     /translation="MKTPDPPFDEPITLPIEDSIDLHTFQPKEVASVVEEYLEECRRA
                     GFSEVRLIHGKGIGVQRNIVRSVLSKHPAVLSHHDAPAEAGGWGSTVVVLKQQN"
     gene            complement(1472..1969)
                     /gene="lspA"
                     /locus_tag="VLM90_06600"
     CDS             complement(1472..1969)
                     /gene="lspA"
                     /locus_tag="VLM90_06600"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: protein motif:HMM:TIGR00077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HSQ12667.1"
                     /translation="MSAKGKLVFAWLVPIVAFDQLTKVIVDRTMPLYHSIPIIDGFFN
                     LTYVRNTGAAFGIFAGAHEVFRLPFLIGVSIVAIGFIIVMLKRLRDDATALITALAFI
                     LGGAVGNLIDRIVYGEVIDFLDVYWSNYHWPAFNLADSFITIGVAITLFYLIRAKDED
                     PFAAN"
     gene            complement(1966..>2531)
                     /locus_tag="VLM90_06605"
     CDS             complement(1966..>2531)
                     /locus_tag="VLM90_06605"
                     /inference="COORDINATES: protein motif:HMM:NF019869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HSQ12668.1"
                     /translation="LDTLVHLMAPILSFTAEEIWGYMPDKHRRSNSIFLSPIPEPDVS
                     LNDPQVTEKWDRIFQERSEVLKALEQARAAGIIGHSLDASVVFEPLNGAHGSLLRDLI
                     ENDRNRLQDLLIVSQASLSGDPAAAATNQVSSYDADSLNCRITVGKASGRKCERCWKY
                     DADVGKDQSHPTVCARCAAVLNAGATA"
BASE COUNT          533 a          742 c          706 g          550 t
ORIGIN      
        1 actaaaggcc ccatcactat tccgctcatg aagcgcgccg gctttccgcc gcacatcgcc
       61 ggtgccgttg aagctgccgc ttccaccggc gccgcgatta tgccgccggt catgggggct
      121 ggagcattcg tgatgtcgga gatgacgggc attccgtacg tggacatcat caaggtggcg
      181 acgattccag gcattctcta tttcctgtcc gtcggcgtca tggtttattt cgagtcacga
      241 aaactcggct tgcgcgggct gccggcagag gagttaccgc gcacgcgcga agtctggggg
      301 cgcggctggt acctatttct accgattgcc gtcttgatcg gcgctttaat gacaggctat
      361 tcgccgcagc acgcggcgct ctacggcatg gcttcgacca tcgccgttag ctggattcgc
      421 aaggaaacac gcatgggcgt gccgcagatc tggcaggcct tggtcgacgc gggaaaaaac
      481 tgcctgttcg ttgccgcgct caccggctgc gtcggtgttc taatcggagt cctctccctc
      541 acgggcattg ttattcgctt tccttacatg ctggtcgagc tagccggtca aagcgtattg
      601 atcaccattg cgctgatcgc ctgcgccacg ctggtgctcg gtttgccgct accgattacc
      661 gcgacatatc taatcgtcgc cgtcatcgcc gtgccagcgt tgatcaagct cggcgtaccg
      721 atgctttcag ctcacctgct gattttttgg ctgagcctcg attcgaatat cacgccgccg
      781 gtggccatgg ggccttttgc cgcggcggcg atcgcccaag ccgatccgat gaaaactggc
      841 tgggcctgtt ttcgtttcgc caaaattatc tatgtgatgc cgttgctttt cgcctacacg
      901 cacatcttgt tgactggaac tcccgcggag aatattggcg ccatcgcgtc ggcgaccctc
      961 ggcaccgtgc tattttcgat catgagcaca ggttgttttt atctccggac gaagtttctg
     1021 gagtggatac ttttggccat cgcgacggtc ctggcgttca tacccacttt cgcgactgga
     1081 atcgcagcgc tgacattatt tgtggcagtc ttcatgtggc agcgccgccg agccgtgacg
     1141 ttggtgccca cgaacccaca aatcgagatc gccgccaaat gaaaacaccg gaccctccct
     1201 ttgacgagcc cattactctc cccatcgaag acagcatcga cctgcatact tttcagccca
     1261 aggaagtggc gagcgtcgtc gaagaatatc tagaagaatg ccgccgagcc ggcttctccg
     1321 aagtgcgctt gattcacggc aaaggcattg gcgtccagcg caatatagtg cgctcggtct
     1381 tgagcaaaca tcccgccgtt ctgtctcatc acgacgcgcc cgccgaagcc ggcggctggg
     1441 gctccaccgt cgtggtcctc aaacagcaaa actagtttgc cgcgaacgga tcttcgtctt
     1501 tagctctgat caaataaaaa agagtgatcg ccacgccgat ggtgatgaag ctgtcggcca
     1561 ggttgaaagc cggccaatgg tagttcgacc aatacacatc caaaaaatcg atcacttccc
     1621 cgtaaacgat gcgatcgatc aggttaccga cggcaccgcc gagaatgaag gcgagcgcgg
     1681 tgatgagcgc ggtcgcatca tcgcgcaagc gtttgagcat gacgatgata aagccgatgg
     1741 ccacgatgga aacgccgatc aaaaacggca gacgaaagac ttcgtgagcg ccggcgaaga
     1801 tgccgaaggc cgcgccggtg ttgcgcacat aggtgagatt aaaaaatccg tcgatgatcg
     1861 ggatcgaatg ataaagcggc atcgtccggt cgacgataac tttcgtcaac tgatcgaaag
     1921 cgactatcgg caccagccaa gcgaagacaa gcttcccttt cgcgctcaag cagttgctcc
     1981 ggcgttgagt accgcggcgc agcgagcgca gacggtcgga tgagactggt ccttgcccac
     2041 gtccgcgtcg tacttccaac agcgctcgca cttgcggccg ctcgccttgc cgacagtaat
     2101 gcgacaattc aacgagtcgg catcatagga agaaacctga ttcgtcgcgg cggcagctgg
     2161 gtcgccagac aaactcgcct gagaaacaat caacaaatcc tggagccggt tccgatcgtt
     2221 ctctatcaga tcgcgtagaa gcgagccgtg cgcgccgttc agcggctcga acacaacgct
     2281 ggcgtcgagc gaatggccga tgattcccgc agctcgcgct tgttccaagg ctttgaggac
     2341 ttcgcttctc tcttgaaaga tccggtccca tttttccgta acctgcggat cgttcaagct
     2401 cacgtcaggc tcgggaatcg gcgaaagaaa aatgctattg gaccgacggt gcttgtctgg
     2461 catgtagccc cagatttctt ccgcagtgaa agacagaatc ggcgccatca agtggaccag
     2521 cgtgtcgagg a
//
LOCUS       DATIRS010000525         2408 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_137495, whole genome shotgun sequence.
ACCESSION   DATIRS010000525 DATIRS010000000
VERSION     DATIRS010000525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2408
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137495"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1121
                     /locus_tag="VLM90_06610"
     CDS             <1..1121
                     /locus_tag="VLM90_06610"
                     /EC_number="1.1.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_function: GO:0070968 - pyrroloquinoline quinone binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HSQ12669.1"
                     /translation="LVGLTACGSGPAQAQAPRSPTPASVNGIVQVQSIAKGLEHPWSL
                     AILPDKRMLVTERRGRLRLVGADGRVSEPLAGVPQVYASGQGGLLDVVLSPGFEKDRL
                     VYLSFAESGDGGAGTAVARGRFGERGLENTQVIWRQQPKVGGSNHWGSRIVFRSDGTL
                     FVTLGERFNHSDRAQDLSATLGKVVRINPDGSAPSDNPFVNHAGARAEIWSYGHRNVQ
                     AAALHPATGQLWTVEHGARGGDELNHPEAGKNYGWPVISYGSHYTFLKIGEGAVKPGM
                     EQPVYYWDPVIAPSGMAVYTGDLFAGWKNNFLIGSLTPGGLVRLVMKDGKVTQEERYL
                     GDLRERIRDVRQAPDGSLYLLTDSRDGQILRITPAANR"
     gene            complement(1213..2262)
                     /locus_tag="VLM90_06615"
     CDS             complement(1213..2262)
                     /locus_tag="VLM90_06615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12670.1"
                     /translation="MKNPTVLAALAVIACVSSAGRGHAQSDFYKGKTITVVQIVGAGG
                     TGDLRRRALFPFLQKYIPGNPTIVSDYMPGGGGRKAANHVYRVARPDGLTIGGVSSSL
                     VSNAILDTGGVQYDIDKLIYLGSPVSVFHYVFLTRKESGLNNLEKLRAATGVRIGAQE
                     VGHDIYITGRLFAYLMNLKEPRFVTGYGGPEIDIALARGELDGRANAAETLAQRNFEE
                     IKKGLLDLHALVEIPKGNRPDGFERLPEIEGFAKSDTERKLLAMYRAFRLVGTPYVLA
                     PGTPKLQVQILQEAMRKAFKDPDFHREFKKLSGFEASPLMPEEQEKVIRELPRDRDVV
                     ELFKKLSGPDPLPAR"
BASE COUNT          476 a          716 c          709 g          507 t
ORIGIN      
        1 tacttgttgg gctcacggcg tgtgggtccg ggccggcgca agctcaggcg ccgcgctcgc
       61 caacgccagc ctcggtgaat ggcattgttc aagtccagtc gatcgccaaa gggctcgagc
      121 atccgtggag cctcgccatc ctcccggaca agcgcatgct tgtcactgaa cgtcgagggc
      181 gtttgcgcct ggtgggagcg gacggccgcg tctccgaacc gctcgccgga gtcccgcagg
      241 tttacgcaag cgggcagggc gggttgctcg acgtagtact gagtccggga ttcgaaaagg
      301 accggctcgt ttatctctct ttcgccgaat ccggcgatgg cggcgcaggc accgcggtcg
      361 cccgcgggcg gttcggcgag cgcgggctcg aaaacaccca agtgatctgg cgtcagcagc
      421 ctaaggtcgg tggctcaaat cactgggggt cgagaattgt ttttcgttcc gacggcacgc
      481 tgttcgtgac tttaggcgag cggttcaatc actccgacag ggcccaggat ctatcggcga
      541 cgctcggcaa ggtcgtgcgc atcaacccgg acggctcggc gccgagcgac aatccgtttg
      601 tcaatcacgc cggcgcgcga gcggagatct ggtcctatgg gcatcgcaac gtccaagccg
      661 ccgcgctcca tcccgcgacc ggccagctct ggaccgtgga gcatggcgcc cgcggcggcg
      721 acgaactgaa ccatcccgaa gcggggaaaa attacggctg gcccgtgatc tcttacggtt
      781 cccactacac ttttttgaag atcggcgaag gcgcggtgaa acccgggatg gagcaaccgg
      841 tctactattg ggatccggtg atcgcgccct ctggcatggc ggtttatacg ggggatctat
      901 tcgccggttg gaagaacaac tttctcatcg gctcgcttac cccgggaggg ttggtgcggc
      961 tggtgatgaa ggacggcaaa gtcacgcaag aagagcgtta cctgggcgat ttacgagaac
     1021 gcatccgcga cgtgcgccag gcgccggatg gatcgctcta tcttctcacc gactcgcgcg
     1081 acggccagat actgcgcata acgccggcag ccaaccgttg agtgataaaa aagctgataa
     1141 gcttggatgg agacgggtct gaccctcgtg gacttaccga agccttcccg tgttccctga
     1201 accgcttttc tattagcggg ccggcagtgg atccggaccc gagagtttct tgaaaagttc
     1261 gacaacgtcg cggtcacggg gcagctcgcg aatcactttc tcctgctctt ccggcatcag
     1321 cggcgaggcc tcgaagcccg acagtttttt aaactctcga tgaaaatccg ggtccttgaa
     1381 tgctttgcgc attgcttcct ggagaatttg cacctgcaac ttgggggttc ccggcgcaag
     1441 gacgtagggc gtgccgacaa gccggaaggc gcggtacatg gctaagagtt ttcgctcagt
     1501 atcggatttg gcgaaacctt cgatttcggg caggcgctcg aatccatccg gtctgttgcc
     1561 cttcggtatt tcaaccagcg cgtggagatc gagcagtcct ttttttatct cctcgaaatt
     1621 gcgctgggcc aatgtttctg cggcattcgc ccggccgtcc aattcgccac gcgccaaggc
     1681 gatgtcgatt tccggaccgc cgtagccggt aacaaatcgc ggttccttca aattcatcag
     1741 ataggcaaac aaccgcccgg tgatatagat gtcgtgtccc acttcttgag cgccgattct
     1801 tacccccgtc gccgcgcgca atttttccaa gttgttaagg ccggactctt ttcgcgtgag
     1861 aaaaacataa tgaaagacgc tgacgggcga tcccagataa atcagtttgt cgatatcgta
     1921 ctgcaccccg ccggtgtcga gtatcgcgtt gctcaccaga gaagacgaca caccgccgat
     1981 ggtcaagcca tccgggcggg cgacgcggta aacgtggttt gccgcctttc tacctccgcc
     2041 tcccggcatg taatcggata cgatcgttgg atttcccggg atgtatttct gcagaaacgg
     2101 gaaaagcgct ctacgccgca gatcgccggt gccgccggcg ccgacgatct gcaccacggt
     2161 aatcgttttg cccttgtaaa aatcagactg ggcatgtcca cgcccggccg agcttacgca
     2221 agcgattacc gccaaggccg ctaacaccgt agggtttttc ataaccacac ctcccgctgc
     2281 ttctagccga atctgcacca cgggatgccc aggttgagac agacatttca caccagaggc
     2341 gcgaagagcg cagagttcgg attatttctt gatgaaaaac tcttttttcg cgcactccgc
     2401 gcgtccgc
//
LOCUS       DATIRS010000526         2835 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_137606, whole genome shotgun sequence.
ACCESSION   DATIRS010000526 DATIRS010000000
VERSION     DATIRS010000526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2835)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2835)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2835
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137606"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..978
                     /gene="cax"
                     /locus_tag="VLM90_06620"
     CDS             <1..978
                     /gene="cax"
                     /locus_tag="VLM90_06620"
                     /inference="COORDINATES: protein motif:HMM:TIGR00378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015368 - calcium:monoatomic cation
                     antiporter activity [Evidence IEA];
                     GO_process: GO:0006816 - calcium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium/proton exchanger"
                     /protein_id="HSQ12671.1"
                     /translation="IIPIASLIVEATEHIASRTGDAVGGLLNATFGNAPELIIATVAL
                     KAGLFDMVRASLIGAILANLLLALGVAFLLGGLRYHNQEYNPGATRVYSSMMLIAVIS
                     LVVPSAFSRFFSSEATMRQEQLLNLGMAFVLLIAYGLYLLFMLKTHPEFFAAAGGQEE
                     HHGEGEHWGMPRAVGSLVVASVLAAWMSEILVGAAEGTGKALGMTQTFIGIVFLAIVG
                     GAAESGSAIAMARKNKLDLTVGIALGSCIQIALFIAPALVLLSYVVGPQPLELAFGRA
                     EIGSLLFAVLIGAMVSGDGRANWYKGVQLITVYVIMALLFYLMPEAAPR"
     gene            975..1661
                     /locus_tag="VLM90_06625"
     CDS             975..1661
                     /locus_tag="VLM90_06625"
                     /inference="COORDINATES: protein motif:HMM:NF019500.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005267 - potassium channel activity
                     [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium channel family protein"
                     /protein_id="HSQ12672.1"
                     /translation="MNDSGVVATGGLRVLGSAYLRRRYAVLFYTLLLTMVAVPLVAAF
                     ELRASLIDYFLGANLLAAVVPAGGGRGRVILLATMTVLWLARSATAWFEHPALVAMTL
                     GFWTVIALIAAAAALRFAMGAISVDAEHLYAALSAYLLAGVFFGHFYWVLQQIRPDTF
                     AVTGDFSRMSAIYFSFVTLATLGYGDIVPRSDVARGLAIVEGVGGQLFLAVMVARLVS
                     LYGRGKADNS"
     gene            1728..2183
                     /gene="nrfH"
                     /locus_tag="VLM90_06630"
     CDS             1728..2183
                     /gene="nrfH"
                     /locus_tag="VLM90_06630"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF015237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase small subunit"
                     /protein_id="HSQ12673.1"
                     /translation="MKLHTIQGILLGVVIGIATGIGLYTFAYAQGWSYLTDNPAACAN
                     CHVMREQFDGWLKSSHRAVANCNACHTPANLIGKYATKASNGFWHSFYFTTGGYPDNI
                     QIKPHSREITEQACRNCHGEIVGAIEPAHLAPAGGQLVCVRCHDSVGHL"
     gene            2380..>2835
                     /locus_tag="VLM90_06635"
     CDS             2380..>2835
                     /locus_tag="VLM90_06635"
                     /inference="COORDINATES: protein motif:HMM:NF014398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0042279 - nitrite reductase (cytochrome,
                     ammonia-forming) activity [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming cytochrome c nitrite reductase
                     subunit c552"
                     /protein_id="HSQ12674.1"
                     /translation="MAENNDNDAFVRRRRRRFLIIVGGAVLATIVGVALLMNIFERKQ
                     EARNPFYRVVELTDDTEDPAVWGKNFPLQYDDYKRTVDQVRTRFGGSEAEPRTPTKAD
                     PRSIVSQSKIEEDPRLKVMWAGYAFAKDFREERGHAYMLDDQIFTERQQV"
BASE COUNT          525 a          807 c          848 g          655 t
ORIGIN      
        1 attattccga tcgcttcgct gattgtcgag gcgacggagc atattgcgtc acggaccggt
       61 gatgcggttg gcggactgct gaacgcgacc ttcggcaacg cccctgaact gatcatcgcg
      121 acggttgccc taaaagccgg gctgttcgac atggtgcggg cttcgctcat cggcgcgata
      181 ctggcgaatc ttctgctcgc tctgggagtc gccttcttgc tcggcggact gcgttatcac
      241 aatcaggaat acaaccccgg cgccacgcgg gtctacagct cgatgatgct catcgccgtg
      301 atcagtctgg tagtgccgag cgcattcagc cgctttttct cgtcagaggc gacgatgcgc
      361 caggagcaat tgctaaacct gggcatggcg ttcgtcctcc tgatcgccta tgggctatac
      421 cttttgttca tgctcaagac tcatcccgaa ttcttcgccg ctgcaggcgg tcaagaagaa
      481 caccatggcg agggcgagca ttggggaatg ccaagagcgg tcggcagcct ggttgtcgcc
      541 tcggtgttgg cggcgtggat gagtgagatc ctggtcggcg cggccgaagg gacgggcaaa
      601 gcactcggta tgacacagac cttcattggc atcgtctttc tggctatcgt aggcggcgcc
      661 gccgagagtg gatcggccat cgccatggcg cgaaaaaaca agttggatct cactgtcgga
      721 atcgccctcg gcagttgtat ccagatcgca ctatttattg ctcctgctct ggtgctcctg
      781 agttatgtgg tgggtccgca gccgctcgag cttgccttcg gcagggcgga gattggctcg
      841 ctgttatttg ccgtgttgat cggcgccatg gtttcggggg acgggcgagc gaactggtat
      901 aagggcgttc aactgatcac ggtctacgtc atcatggcat tgttatttta cttaatgccg
      961 gaggcggcgc cgcgatgaac gattccggtg ttgtcgcaac cggcggcctg cgcgttttgg
     1021 ggagcgctta tttgcgtcgg cgctatgcgg ttctcttcta cacgctgctg cttacgatgg
     1081 tggccgttcc gcttgttgcg gctttcgaat tgagagcgtc tctgattgac tattttctcg
     1141 gcgccaacct gcttgccgcg gtagtgcctg ccggcggggg gagaggccgc gtcattctac
     1201 tcgccactat gactgttctg tggctggcgc gttcggcgac ggcatggttt gaacatccgg
     1261 cactggtggc gatgaccctc gggttctgga cggtgatcgc gctgattgcg gcagcggctg
     1321 ctttgcgctt cgccatgggc gccatttctg tggatgccga gcatctgtac gcggcgctca
     1381 gcgcctacct gctcgcgggg gtctttttcg gccacttcta ttgggttctc caacagattc
     1441 ggccggacac cttcgcggtc accggcgatt tctcacgcat gagcgcgatc tactttagct
     1501 tcgtcacact ggccaccctc ggctacggcg acatcgtgcc gcgcagcgat gtggcgcgcg
     1561 gtctggccat cgtcgagggt gtcggagggc agctttttct cgctgtaatg gtggcgcgac
     1621 tggtcagcct ctatgggcgg ggaaaagcag acaactcata agcgctcaac acagttctta
     1681 aggcttcggg aaaaattaga tcccttggtg atacgaagat aatccggatg aagcttcaca
     1741 cgattcaagg gatcctgctc ggggtggtta tcggtatcgc gacgggcatt ggcctctaca
     1801 cctttgcgta tgctcagggt tggtcttatt tgacagataa tccggcggcc tgcgccaact
     1861 gccacgtcat gcgcgagcaa ttcgacggct ggctcaagtc gtcccaccgc gccgttgcga
     1921 attgcaatgc ctgccacacc ccggcaaacc tgatcggcaa gtatgcaacc aaggcatcga
     1981 acggcttctg gcattcattt tacttcacca ccggcggcta cccggacaat attcaaatca
     2041 aaccgcacag ccgcgagatc accgagcaag cctgtcgcaa ctgccatggg gaaattgtcg
     2101 gcgccatcga gccggcacat ctggcgccgg ccggcggaca actcgtctgc gtgcgctgcc
     2161 acgactcggt gggacatctt tagcaggccg ctgaaaaaga ctcatatgct tcgttgcgct
     2221 caatcgcctc gtgtcaacgt accgccgatg tacgccgccg ctcgtctatt tttcgcgcgc
     2281 ctcgcctcgg agatcttttt aagcagcctg caatccgggt ttttcagtaa accgttagtg
     2341 atgaaaagaa tcacgagcag aatcgtttga ggagtttcta tggctgagaa caacgataac
     2401 gacgcatttg tgcgccgtcg ccgccgccgt ttcttgatca tcgtgggcgg agctgtgctc
     2461 gcgaccattg ttggtgtcgc cttactgatg aatatcttcg agcgcaaaca agaggcgcgt
     2521 aatccgtttt atcgcgtggt cgagctcacc gacgatactg aagatcccgc cgtatggggc
     2581 aagaactttc cgttgcaata cgatgactac aaacggacgg tggaccaggt gcgcacccgc
     2641 ttcggcggca gcgaggccga gccgcgcacg ccgaccaagg ccgatccgcg ctcaatcgtc
     2701 tcgcaatcga agatcgaaga agacccgcgt ttgaaggtga tgtgggccgg ctacgcgttt
     2761 gccaaggatt ttcgcgagga gcgcggccac gcctacatgc tcgacgatca gatcttcacc
     2821 gagcgccaac aagtc
//
LOCUS       DATIRS010000527         1693 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_924938, whole genome shotgun sequence.
ACCESSION   DATIRS010000527 DATIRS010000000
VERSION     DATIRS010000527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1693
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_924938"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..296)
                     /locus_tag="VLM90_06640"
     CDS             complement(<1..296)
                     /locus_tag="VLM90_06640"
                     /inference="COORDINATES: protein motif:HMM:NF013225.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HSQ12675.1"
                     /translation="MSKSREDLEKKLAGLEQKVAAGDPKTTAKLHDQGNLTARERIDK
                     LLDPATFVEEFMLAETPCADFGMAERKQPSDGVVTGFGKIEGRPVYVYSQDRAI"
     gene            complement(310..1458)
                     /locus_tag="VLM90_06645"
     CDS             complement(310..1458)
                     /locus_tag="VLM90_06645"
                     /inference="COORDINATES: protein motif:HMM:NF015910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium ion-translocating decarboxylase subunit
                     beta"
                     /protein_id="HSQ12676.1"
                     /translation="MESALVSGVQGLFAGVVNITIWQIIMIAIASVLLYLGIKKGYEP
                     LLLVPIGFGAILVNIPLADMMGKEGFLRFFYDAGVLTEVFPLLIFIGIGAMTDFQPLL
                     QNPKIILLGAAGQFGIFLTLLLALALGFDKLDAVAVAIIGACDGPTAIYVSSKFAPHM
                     LGAVSVAAYSYMALVPLIQPPIMRALTTEKERQVVMGAAKLEPISKTTKIVFPIAVTI
                     FASILAPKGAPLIGTIMLGNLLRESGVVERLNSASENEIANIVTLLLGLCIGATMEAD
                     KFLKAQTLLILGLGFIAISLDTVVGLLFGKLMCFMTGGKVNPLIGAAGISAFPMAARV
                     VQAEGQKYNKKSYLLMHAMSANAGGQIGSVIAAAVMLSVLQGMGIVGG"
     gene            complement(1468..1614)
                     /locus_tag="VLM90_06650"
     CDS             complement(1468..1614)
                     /locus_tag="VLM90_06650"
                     /inference="COORDINATES: protein motif:HMM:NF040909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OadG family protein"
                     /protein_id="HSQ12677.1"
                     /translation="MDTWTFGWTLALIGMGGTMLVLWLISVMILLIRKVFPYQAEPSA
                     AKKG"
BASE COUNT          390 a          465 c          482 g          356 t
ORIGIN      
        1 attattgcgc ggtcttggga ataaacataa accggccggc cttcgatctt gccaaaaccg
       61 gtgacgacac cgtcggaggg ttgtttgcgc tcggccatgc cgaagtccgc gcacggcgtt
      121 tcggccaaca tgaattcttc gacgaaggtg gcggggtcta acagtttgtc gatgcgctcg
      181 cgggcggtga gattgccttg gtcgtgcagt ttcgccgtgg tcttcggatc gcccgcggcg
      241 accttttgtt ccagaccggc gagctttttt tccagatctt ctctcgattt cgacatgggc
      301 gccgcctgat cagccaccga ctattcccat cccctgcaac accgaaagca taactgccgc
      361 tgcgattacc gagccgatct gcccgccggc gttggcgctc atggcgtgca tcagcagata
      421 actttttttg ttgtatttct gcccttcagc ttgaacgacg cgagccgcca tgggaaatgc
      481 tgagatgccc gcggcgccaa tcagcggatt gactttgccg ccggtcataa agcacatcaa
      541 cttgccaaac aggagtccga cgactgtatc caagctgatg gcgatgaagc cgagccccaa
      601 aatcaacagc gtttgcgctt tcaaaaactt atccgcttcc atggtggcgc cgatgcacag
      661 gccgagcagc aaggtaacga tattggcgat ctcattttcc gaggcgctat tgagccgctc
      721 gaccacaccg ctttcacgca acaagttgcc gagcataatc gtgccgatga gcggcgcgcc
      781 tttgggggcc aggatcgaag caaaaatggt cacggcgatg ggaaagacga tcttggtggt
      841 cttcgagatc ggctccaact tggccgcgcc catgacgacc tgccgttctt tctcggtggt
      901 gagagcgcgc atgatcggcg gctgaatcaa tggcaccaga gccatgtacg aatacgcggc
      961 gaccgatacg gcgccgagca tgtgcggggc gaacttggag ctgacgtaaa tcgccgtcgg
     1021 cccgtcgcat gcgccgatga tggccacggc gacggcatcg agcttgtcga agcccagagc
     1081 cagcgccagc aatagggtca agaaaatgcc aaattggccg gcagcgccga gcagaatgat
     1141 tttggggttc tgcaataacg gctggaagtc ggtcatggcg ccgataccga taaaaatcag
     1201 caatggaaag acttcagtaa gcaccccagc gtcgtaaaag aagcggagaa agccttcctt
     1261 gcccatcatg tcggcgagag gaatgttaac caggatggca ccgaaaccga tgggcacgag
     1321 caggagcggt tcgtagcctt ttttgatgcc gaggtagagc agcaccgaag cgatggcgat
     1381 catgatgatt tgccagatcg taatgttaac gacaccggca aataggccct ggacgccgga
     1441 aactagcgca gattccattg acggatgcta acctttcttc gctgccgatg gttcggcttg
     1501 atacgggaaa acttttctaa tgagcaagat cattacgctg atgagccaaa ggaccagcat
     1561 ggtcccgccc ataccaatca acgccagcgt ccagccgaac gtccaggtat ccatgaaatc
     1621 tccttgtggg attagatcgc tgagctaacg ggatgcaatc tgcgattatt cgatgattgc
     1681 gagaacttgc tcg
//
LOCUS       DATIRS010000528         1715 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1318222, whole genome shotgun sequence.
ACCESSION   DATIRS010000528 DATIRS010000000
VERSION     DATIRS010000528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1715
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1318222"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..832)
                     /locus_tag="VLM90_06655"
     CDS             complement(<1..832)
                     /locus_tag="VLM90_06655"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HSQ12678.1"
                     /translation="MDFSAQLVALASTAVYAAGNLYARVGLIHSTPLVVTLISLIVQT
                     VVVWTILLARGSVPSADPHALAVFIAVGVALPFVRWLSYTGIARIGSARSSSLRSTHP
                     FFSAALAIAFLGEPARHNIMLGTLLIVTGIFVTCWESKGYRTDAKPLDVTFPLAAAFF
                     SGIIHPFTRYALTITNEPLLYSAVVGLSSLLCLGSYLLISGHIRQMVWPDRRALRSFV
                     SASLFETVGFLLFSAAVSLGPVVLIAPIMATTPMWVLLGSILVLRDLEKVTLRTALGS
                     C"
     gene            815..1090
                     /locus_tag="VLM90_06660"
     CDS             815..1090
                     /locus_tag="VLM90_06660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12679.1"
                     /translation="MSGEIHGIEQGGLTVQLQLADSKPQFHSPMSLTEFGADVRNRRG
                     SANRSAKFLILLGMLGSAGSIGHAAESRYSAWFALSHNDDGFRLAPE"
     gene            1148..>1715
                     /locus_tag="VLM90_06665"
     CDS             1148..>1715
                     /locus_tag="VLM90_06665"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HSQ12680.1"
                     /translation="MEYRQMGNTGVRVSVVGLGTNRFGSADMPQTEVNKVIDAALDAG
                     VNFLDSANVYNDGRSEETLGAALKGRMDKVVMATKFNFPRKTSANSWGASRYQMMQSV
                     EQSLRRLQTDHIDLFYCHRWDDTTPIEETLRGLDDLIRMGKVNYLGASLYASWQLAHA
                     NVLAELKGWTRFAVLQSEYNLLKRDVERE"
BASE COUNT          409 a          445 c          547 g          314 t
ORIGIN      
        1 cgcagctgcc gagggcggtg cgcaaggtta ccttctccaa gtcgcgcaaa actaagatcg
       61 agccgagcag cacccacatg ggagtggtcg ccatgatcgg cgcgatgagc acgactgggc
      121 cgaggctgac ggcggcactg aacaggagaa agccgacggt ctcgaacaaa ctcgccgaga
      181 caaatgaccg cagcgcccgg cgatcgggcc aaaccatttg tctaatgtgg ccggaaatca
      241 gcagatagct tcctaagcaa agcaaggacg ataagccaac cacggcggag taaagcaatg
      301 gctcgttggt gatggtcagg gcatagcgcg tgaatggatg aatgatgccg gaaaaaaacg
      361 ccgccgctaa cgggaaggtc acgtccaagg gtttggcatc ggttcgatat cctttggatt
      421 cccaacaggt gacaaagatc ccggtgacga tcagcagggt gccgagcatg atgttgtgcc
      481 gcgccggctc gccgaggaac gctatggcca aggccgcgct gaagaacgga tgggtcgaac
      541 gaagggacga cgagcgcgcc gaaccgatgc gggcgatgcc ggtgtaactc agccagcgca
      601 cgaaaggcaa tgcgacgccg acggcgatga agaccgcgag cgcgtgcgga tcggcgctgg
      661 gaacgctgcc gcgagccaac aggatcgtcc agacgaccac agtttgcacg atcaaggaga
      721 tcaacgtgac caccagaggc gttgaatgga tgaggccgac acgggcgtag agattgccgg
      781 cggcgtagac ggcagtggaa gcgagggcga cgagttgagc ggagaaatcc atgggatcga
      841 gcagggaggt ttgactgttc agctacaatt agccgattcg aaacctcagt tccattcgcc
      901 aatgagtttg accgagtttg gtgcggatgt tagaaatcgc cgtggttctg caaaccgctc
      961 ggcaaaattc ctgattctct tggggatgct tggaagtgcg ggaagtattg gtcatgccgc
     1021 cgaaagccgg tattcggctt ggtttgcttt aagtcacaat gatgatggat tccggcttgc
     1081 gccggaatga cggaaaagaa attcggcttg gagccgagcg ttttgttatc agcagcaggg
     1141 agatttcatg gaatatcggc agatgggcaa caccggcgtg cgcgtatccg tcgtcggttt
     1201 gggcaccaat cgtttcggtt ccgcggacat gccgcaaacc gaggtcaata aagtgatcga
     1261 tgcggcgctc gacgccggcg tgaatttttt ggattccgcc aacgtttaca acgacggccg
     1321 gtcggaggaa acgttaggcg cggcgctcaa agggcgcatg gacaaagtcg tcatggcgac
     1381 caagttcaat tttccgcgca agaccagcgc caacagctgg ggggcatcgc gctaccaaat
     1441 gatgcagtcc gtcgagcaaa gtctgcgccg tttgcagacc gatcatatcg atctctttta
     1501 ctgccaccgt tgggacgaca ccacgccgat cgaggagacg ctgcgcggcc tggacgattt
     1561 gatccgcatg ggcaaagtga attacctcgg cgcttcgctg tacgcctctt ggcaattggc
     1621 ccacgccaat gtgctcgcgg aattaaaagg ctggacgcgc tttgccgtct tgcagtccga
     1681 atacaacttg ctcaagcgcg acgtcgagcg cgaag
//
LOCUS       DATIRS010000529         1661 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_236644, whole genome shotgun sequence.
ACCESSION   DATIRS010000529 DATIRS010000000
VERSION     DATIRS010000529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_236644"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..825)
                     /locus_tag="VLM90_06670"
     CDS             complement(<1..825)
                     /locus_tag="VLM90_06670"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSQ12681.1"
                     /translation="MLAIALIALPAFANNYFLSIATLFLFFAYTGQAWNIMMGFAGQL
                     SLGHALYLGVGGYSAGALYFHYGIGPWMGVGLAIIVCIALSAFLGALAFRYGISGVYF
                     TLLTIAFAECARIGFDHLSWTGGSAGLFLKVTQRDRIDLVNLRGPPALYYYAILALTA
                     LACGFSAWLLRRRPGYYWQAIRENEEAARALGINTVRWKILAVVISAAMTAVAGVFLA
                     FYYNNLFPEQVFNNNRSVEIILGPIVGGIGTLFGPIIGAALMTLLTDGASELVAALG"
     gene            complement(852..>1661)
                     /locus_tag="VLM90_06675"
     CDS             complement(852..>1661)
                     /locus_tag="VLM90_06675"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSQ12682.1"
                     /translation="GLMALGLSVIFGVARVVNFAHGEMMTLAMYASVILFSAFELNPF
                     IAVLPVAAIFFVLGYGLQRWIVNPFVTRPEHAQFMLLLAIAIILTNGQLMVFGPDARS
                     VRLDSLLESIELGALLIDRGKLYAALVALSTAAALFSFFRFTRSGTAIRACADNWIGA
                     KVVGLNVKQIYALAFGLGSVCVAVAGCMMILLVDLTPSIGPGYTLLAFVIVIVGGLGS
                     MNGALVGGVLIGLSEALAGLFILPSAKSMFSFALLIVVLLLRPRGLLGGQR"
BASE COUNT          418 a          462 c          531 g          250 t
ORIGIN      
        1 gccgagagca gcgaccaatt cgctggcgcc gtcggtgagc aaagtcatta gcgcggcccc
       61 aataatcggg ccgaacagcg tgccgatgcc gccgacgatg ggccccagga tgatttcgac
      121 ggagcgatta ttgttaaaaa cctgctcggg aaaaaggttg ttgtaataga acgcaagaaa
      181 cacgcccgcc accgcggtca tcgccgcgct gataacaacg gcgagtattt tccagcgaac
      241 ggtattgatg ccgagtgcgc gcgcggcttc ctcgttttcg cgaatcgctt gccagtaata
      301 gccgggccgg cggcgcaata accacgccga gaatccgcag gccagcgcgg tgagagctaa
      361 gatcgcgtaa tagtacaaag ccggggggcc gcgtagattg accagatcga tgcggtcgcg
      421 ctgggtgact ttgagaaata gtccggctga accgccggtc caggagagat gatcgaagcc
      481 gatgcgcgcg cactcggcga aagcaatggt taagagcgtg aagtaaacgc cggagatgcc
      541 gtagcgaaag gccagggcgc cgagaaaagc gctgagcgcg atgcaaacga tgatcgccag
      601 tcccacgccc atccagggac cgatgccata gtgaaaatag agcgcgccgg cgctgtagcc
      661 gccgacgcct agatacaagg cgtggccgag ggagagttgt ccggcgaaac ccatcatgat
      721 gttccaggcc tggcccgtgt aggcgaagaa caaaaatagt gtggcgatgg aaaggaaata
      781 gttattggcg aaagccggca aggctattaa cgcaatcgct aacaccgcca ataaaaatgc
      841 tgcgcgccga ttcacctctg gccgcctagc agaccgcgcg gccgcagcag cagcacgacg
      901 atcagcaacg cgaagctaaa catggatttc gccgaaggta ggatgaagag tcctgccagt
      961 gcttccgata gaccgatgag cacgccgcca accagcgcgc cgttcatcga gcccagtccg
     1021 ccgacgatga cgatgacgaa ggcgagcagc gtatagccgg ggccgatgct cggcgtcagg
     1081 tcgacgagca agatcatcat acagccggcg acggcgacac agacggagcc taaaccgaac
     1141 gccaaagcgt agatctgctt gacgttcaag ccgacgacct tggcgccgat ccagttgtcg
     1201 gcgcaagcgc ggatcgccgt gccgctgcgg gtgaagcgga agaagctgaa cagcgcggct
     1261 gcagtgctga gagcgaccag cgcggcgtag agtttgccgc ggtcgatcaa gagcgcgccg
     1321 agttcgatcg attcaagcaa gctgtcgagc ctcacgctgc gcgcgtcggg gccgaagacc
     1381 atcaattggc cgttggttag aatgatggcg atggcgagca gcagcatgaa ttgcgcgtgc
     1441 tcgggacgag tgacgaaggg attgacgatc cagcgctgca agccatagcc caagacaaag
     1501 aagatcgcgg cgacgggaag aacggctatg aatggattca actcaaaggc gctgaacaaa
     1561 atcacgctgg cgtacatggc gagcgtcatc atctcgccat gggcgaagtt gaccacgcgc
     1621 gcgacgccga agatgaccga gaggcccagc gccattaagc c
//
LOCUS       DATIRS010000530         2577 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1023706, whole genome shotgun sequence.
ACCESSION   DATIRS010000530 DATIRS010000000
VERSION     DATIRS010000530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2577)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2577)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2577
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1023706"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..419)
                     /locus_tag="VLM90_06680"
     CDS             complement(<1..419)
                     /locus_tag="VLM90_06680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12683.1"
                     /translation="MGWVDADAHVVESPLTWDYLTPAEKKFRPQLFKPEDDNQKAHWV
                     IDGKIRGLFRFTFSKDDLDKKSAEIGRDVSTTMATRDLADVSGRVKHMDELGIDIQVL
                     YTSIFLDQVTERADTEVALCGAYNRWMADVWKQSNGRL"
     gene            complement(528..1292)
                     /locus_tag="VLM90_06685"
     CDS             complement(528..1292)
                     /locus_tag="VLM90_06685"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSQ12684.1"
                     /translation="MGLLDGKVVVVTGGGHGIGRAYCMGIAREGGTAVVADIDDKAAD
                     GVAKAIADKGGKALATKVDVANFPSCQEMAAKALGAYGQIDGLINNAAIFMSVPAEKG
                     SWQGITEEAWDRIMAVNVKGLWLCSRAVVPAMQKRKQGSVVNISSNMAFNGGLTMMHY
                     VTSKAAVVGFSRVLARELGGDNIRVNTLAPGATMSEDKATEEALKNYERSATTRILKR
                     IEQPEDLVGTALYLLSDLSTFVTGQTILVNGGAVLH"
     gene            complement(1403..2458)
                     /locus_tag="VLM90_06690"
     CDS             complement(1403..2458)
                     /locus_tag="VLM90_06690"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ12685.1"
                     /translation="MKKLFALFELLTFIACLAVAGQTWAAAPDEKAVADFYRGKTVRL
                     IVGFSAGGGYDAYTRLIGRHLQKHIPGNPSIIIENMAGAGSIILANHMYNAAPKDGTV
                     IGNFSGQIILEQQFGNPAVQFDLAKFRFLGVPIGETYLLLATKKSGIVKFDDLIGSKS
                     KQLTIGGIPGSTVEQGPMLLRDLLGANIKVVSGYKGTADVRLAMESGELDGFFNSWES
                     TKVTSLDRVKNGDWQILAQVGDQPIAALPVKNVPTIAQIAKTEEQQQLLRFGAYAPNQ
                     FAKVYTVPPGTPADRAAALESALTKTFADKEFLAEAEKGKLDIDPVSATQVQKLVNES
                     FGLPAELKAKLKKILRP"
BASE COUNT          507 a          792 c          672 g          606 t
ORIGIN      
        1 agccgcccgt tgctctgttt ccaaacatcc gccatccagc ggttgtaggc gccgcacaac
       61 gccacctcgg tatcggcacg ctcggtgacc tgatcgagaa agatgctggt gtagagcacc
      121 tggatatcga tccccagctc gtccatatgt ttgacccgcc ccgacacgtc ggcaagatcg
      181 cgggtcgcca tggtcgttga cacgtcgcgg ccgatctcgg cggacttctt gtcgagatcg
      241 tctttgctga aggtaaagcg aaacaagccg cgaatcttgc cgtcgatgac ccaatgagct
      301 ttctggttgt cgtcttccgg cttgaatagc tgcgggcgaa attttttttc cgcgggtgtc
      361 aggtagtccc aggtcagcgg actttcgacg acatgcgcgt cagcgtctac ccatcccata
      421 gcgatttcct ccgtcaatcc attttggatt ttagtctgcg aggcttcttt tgtattttag
      481 attgccgatc tctgactttt gaccatagac tgttgcctat tgccgtctta atgcagcacg
      541 gcgccgccgt tgacaagaat cgtctggcca gtcacgaacg tgctcaggtc ggaaagcaga
      601 tacagcgccg tcccgaccag atcttccggc tgctcgatgc gcttgagaat gcgcgtggtc
      661 gccgaccgct catagttctt caacgcttcc tcagtcgctt tgtcctcact catggtcgcg
      721 ccgggcgcca gcgtgttgac acgaatatta tccccaccca actcgcgagc gagcacgcgg
      781 ctgaacccta ccaccgcggc cttcgaagtc acataatgca tcatcgtcaa gccgccgttg
      841 aatgccatgt tggacgaaat attgacgacg cttccttgtt tacgtttctg catcgcggga
      901 accaccgccc ggctacataa ccataaccct ttgacgttga ccgccataat gcggtcccaa
      961 gcttcttcgg tgataccctg ccaactgcct ttttccgccg gcacgctcat gaagatcgca
     1021 gcgttgttga tcaagccgtc gatctggcca taggcgccga gagcttttgc cgccatctcc
     1081 tggcaactgg ggaaattggc cacgtcgacc tttgtcgcga gcgctttgcc gcctttgtcg
     1141 gcgatcgcct tggcgacgcc gtcggcggcc ttatcatcga tatcggcgac cactgccgtg
     1201 ccgccttcgc gggcgatccc catgcaatag gcacggccaa tgccatgccc gccgccggtc
     1261 accacaacca ctttgccgtc cagtaaaccc atgtcacgct ctcccctacc gctattactt
     1321 atcgcaatta ccggtcatcg ttcaacgata cggcacgcgg gcggccttga acattgaacc
     1381 gttgacgctt gaacagcagc aattaaggcc taagaatctt tttcaatttc gctttcaact
     1441 ccgccggcaa tccaaaggac tcgttgacca gcttctgcac ctgcgtcgcc gacaccggat
     1501 cgatgtcgag cttgcctttc tcagcttcgg ccaggaattc tttgtcagcg aaggttttgg
     1561 tcaacgccga ctccaatgcc gcagcgcggt cggccggcgt ccccggtgga accgtgtaga
     1621 ctttggcgaa ttgattgggc gcgtaagcgc cgaatctgag cagctgttgc tgctcctcgg
     1681 tcttggcgat ctgcgcaatg gtcggcacgt ttttgaccgg cagcgccgcg atcggctgat
     1741 cgccaacctg cgctaggatt tgccaatcgc cgtttttgac cctgtccagc gacgtcacct
     1801 tggtcgattc ccagctattg aaaaatccgt ctagctcgcc gctctccatc gccaggcgca
     1861 cgtcggcagt gcccttgtaa ccgctaacga ccttgatgtt tgcgcccagc aggtctcgca
     1921 atagcatcgg cccctgttcc accgtggagc cggggatacc gccgatggtg agctgcttgg
     1981 acttggaccc gatcaggtcg tcaaacttta cgatgccgga tttttttgtc gccagcagca
     2041 gataggtctc gccgatcggc acgccgagaa agcgaaactt cgctagatcg aattgcacgg
     2101 ctggattgcc aaactgctgc tccaaaataa tctggccgct gaaattgccg atgaccgtgc
     2161 cgtccttggg cgcggcgttg tacatatggt tggccaagat aatgctgccg gccccggcca
     2221 tgttttcgat gatgatgcta ggattgcccg ggatatgttt ctgcaaatgc cggccgatca
     2281 gccgagtata ggcgtcgtag ccgccgccgg cggaaaaacc gacgatcagc ctgaccgttt
     2341 tgccgcgata aaaatccgct accgcctttt catccggcgc ggcggcccaa gtttgcccgg
     2401 ccacggccaa gcaggcgatg aaagttagca gctcaaaaag tgcgaataat tttttcacga
     2461 ctacctcctc ggaaaagact ctttggtaaa ctgggctatc actgcgctcc aatgactgtc
     2521 aaccgtcgat cgaatctatg tcgaatctag cggaaataac gccaggctct ggacagc
//
LOCUS       DATIRS010000531         1570 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_630340, whole genome shotgun sequence.
ACCESSION   DATIRS010000531 DATIRS010000000
VERSION     DATIRS010000531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1570
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_630340"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1570)
                     /locus_tag="VLM90_06695"
     CDS             complement(<1..>1570)
                     /locus_tag="VLM90_06695"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSQ12686.1"
                     /translation="SIEEALASTEESERIHTWNRHANIQKAVSLEFGDIEGGFAGSDH
                     VFEGTFFYQGNTHLPMEQYSAVAFYGPDEKLTLWSSTQTPHYVHRALAKVLGLPAARI
                     RVIATPVGGGFGGKSDPFSHEICAAKLSMITRRPVKITLTREETFYVHRGRHPVKMWA
                     KTGVKDDGTIQAMQYKTFLDGGGYSSYGLASVYYTGALQTVTYKVPAYKFEGVRVFTN
                     KPACGPKRGHGTPQPRLALEIQLDEIAEKLNIDPIELRLKQLVEHNSITVNGLRVSST
                     GLRECIERVAERAGWKKKFRKLPFGHGVGFAASSYISGAGLPIYWNDMPHSGVQIKLD
                     RSGGVAVFCGSIDIGQGSDSILAYAVAEEFGIDPADIRVLTADTDLTPVDLGSYSSRV
                     TVMTGNAAVQACGKLKPLLLEAASQVLEVPPDDLEFADGKIRSASFPKRGISFADAVQ
                     KAEGKHGTLGATGSYTPPKNPRDFKGSGVGPTPAYSFTTSIVELHCDSVTGEIKLDKV
                     WIAHDCGRAFNPLLV"
BASE COUNT          285 a          464 c          487 g          334 t
ORIGIN      
        1 gacgagcagc ggattaaagg cgcgtccgca gtcgtgcgcg atccaaactt tgtcgagctt
       61 gatttcgcca gtgacgctgt cgcaatgaag ctcgacaatg gaagtagtga agctataggc
      121 cggcgtcgga ccgactcccg agcctttgaa gtcgcgcgga tttttcggcg gcgtgtagct
      181 gccggtggcg ccgagcgtgc cgtgtttccc ttcggctttc tgcacggcgt ccgcgaaact
      241 gatgccgcgc ttggggaagc tagcgctgcg aatcttcccg tcggcgaact cgagatcgtc
      301 cggcggcact tccagtactt ggctcgccgc ttcgagcagc agcggtttca gtttgccgca
      361 ggcctgcacc gcggcgttgc cggtcatcac cgtcacgcgg cttgaatagc tgccgagatc
      421 caccggcgtc agatccgtgt ccgcggtgag cactctgata tcggcgggat cgatgccgaa
      481 ctcttccgcc accgcgtagg cgagaatgga atccgagcct tggccgatat cgatggagcc
      541 gcaaaaaacc gcgacgccgc cgctgcggtc gagcttgatt tgcacgcccg agtggggcat
      601 gtcgttccag taaatcggca agcccgcgcc gctgatgtaa gagctcgcgg caaagccgac
      661 cccgtggccg aagggcagct tgcgaaattt tttcttccag ccggcgcgct cggcgacgcg
      721 ctcgatgcac tcgcgcaagc ccgtgctgct gacgcgcaag ccgttgaccg taatgctgtt
      781 gtgttcgaca agctgtttga gccgcagctc gatcggatcg atgttgagtt tctcggcgat
      841 ttcatcgagc tggatttcca acgccaggcg cggctgcggc gtgccgtgac cgcgcttggg
      901 cccgcaggcc ggcttattcg taaagacgcg cacgccttcg aacttataag ccggcacttt
      961 ataagtgacg gtttgcagcg cgccggtgta gtagacgctg gccagaccgt agctgctgta
     1021 accgccgcca tcgagaaaag ttttgtattg cattgcctgg atcgtgccgt cgtctttcac
     1081 gccggtcttc gcccacatct tcaccgggtg tcggcctcgg tgcacgtaga aggtttcctc
     1141 gcgcgtgagc gtgatcttga cgggtcgtct cgttatcatc gaaagtttgg cggcgcagat
     1201 ctcatgggaa aaaggatcgc tcttgccgcc gaagccgccg cccaccggcg ttgcaatcac
     1261 ccggatgcgg gcggcgggaa gcccaaggac tttggcaagc gcccgatgca catagtgcgg
     1321 ggtttgggtc gaagaccaaa gggtcagctt ttcgtccggg ccatagaaag ccactgcgct
     1381 gtactgctcc atcggcaggt gggtattgcc ctgatagaaa aaagtgccct caaaaacatg
     1441 gtctgagccg gcgaacccgc cttcgatgtc gccgaattcg agggagaccg ccttttgaat
     1501 attggcatgg cggttccagg tatgaatccg ctcgctttcc tccgtcgaag ccagcgcttc
     1561 ttcaatggag
//
LOCUS       DATIRS010000532         1729 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_728850, whole genome shotgun sequence.
ACCESSION   DATIRS010000532 DATIRS010000000
VERSION     DATIRS010000532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1729)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1729)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1729
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_728850"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..522
                     /locus_tag="VLM90_06700"
     CDS             <1..522
                     /locus_tag="VLM90_06700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12687.1"
                     /translation="PFWEFFVNTPPADLTNTVTELIRNAPAGNIFPNKAELHTPEITS
                     SHVKGMAQYFGTELIGIAKLDANTPSNPDQLPFAVLCAVHADYDPRAAKGIGGQMPVQ
                     NGLFITFVLSSWIRELGFRATVVRDANVDALAAKAGLGTLNGNGRLVSREFGAEVYVA
                     DAIYTDLPLAADG"
     gene            633..1295
                     /locus_tag="VLM90_06705"
     CDS             633..1295
                     /locus_tag="VLM90_06705"
                     /inference="COORDINATES: protein motif:HMM:NF015862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HSQ12688.1"
                     /translation="MPYIITELCTNDGACVEVCPVACIHTKPGAPQFYVDPEVCIDCE
                     QCEIVCPVDAIFKDVDIPAQYTYAIEVNAAFFRQNKAAIGPVPFATAWAMIESAHEYA
                     SLVGSAITAVVVDEAGAPIAVGKMDKAEARSAELAFNKAYTAAAFHVSTTEMVPQARQ
                     AWLRSLMISHRGKILPMAGALPIVNGVTIVGAIGIAGASRPEQDLLCCRAGMSVWENV
                     HH"
     gene            1426..>1729
                     /locus_tag="VLM90_06710"
     CDS             1426..>1729
                     /locus_tag="VLM90_06710"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HSQ12689.1"
                     /translation="MQAGEFTFLAQDARGPDGVVRAAPSAEEQTRQCLLNLDVALHPL
                     GVSTADVVSLAVYIADYGDAAAVAKTLRARFGNDAPAVNFVGVCALDGGCRVRMDAI"
BASE COUNT          350 a          560 c          484 g          335 t
ORIGIN      
        1 cccttctggg agtttttcgt gaatacgccg cccgccgatc tcactaatac ggtgacggaa
       61 ctgatccgca atgcaccggc ggggaatatt ttccccaata aagccgagct gcacacgccc
      121 gagatcacct ccagccatgt caaaggcatg gcgcagtact tcggcacgga gctgatcggc
      181 attgccaagc tcgacgccaa tacaccaagc aacccggatc aactgccgtt cgccgtcctc
      241 tgcgccgtcc acgccgacta cgatccgcgc gcagccaaag gtatcggcgg ccagatgccg
      301 gtgcaaaacg gcttgttcat cacctttgtc ttgagttcat ggattcgcga attgggcttt
      361 cgcgccacag tggtgcgcga cgccaacgtc gatgcgctgg cggccaaagc aggcttggga
      421 acgttgaatg gcaatggccg gctggtcagc cgcgaatttg gcgccgaggt ttacgttgcc
      481 gacgcgatct acaccgatct tccgctagcc gcggacggct aggccttcgg ccattccaga
      541 ttacaaattt cagatttcaa attgccgatc cgaactctgg aatatgtaat ttggaatctg
      601 gaattagata tttcgagcga agcgaggacc ccgtgcccta catcatcacc gaactttgta
      661 ccaatgacgg cgcctgcgtc gaagtttgtc cggtagcttg catccacacc aaaccgggcg
      721 cgccgcaatt ctacgtcgac ccggaagtct gcatcgactg cgagcagtgc gagatcgtct
      781 gcccggtgga cgcgatattc aaagacgtgg atattcccgc ccaatacacc tacgccatcg
      841 aagttaacgc ggcattcttc cgccagaaca aagcagccat cggcccggtg cccttcgcta
      901 ccgcctgggc gatgatcgag tccgcccacg agtacgccag cctggtcggc agcgcgatca
      961 ccgccgtggt ggtcgacgag gccggcgcac ccatagcggt cggcaagatg gacaaggccg
     1021 aagcgagaag cgccgagctg gcgttcaaca aggcctacac cgccgccgcg tttcacgtct
     1081 caactactga aatggtgccg caagcgcgcc aggcctggct acgcagcctg atgatttcgc
     1141 accgcggcaa gattttgccc atggccggcg ccctgccgat cgtcaacggc gtcaccatcg
     1201 tcggcgccat cggcatcgcc ggcgccagcc gtccggaaca agatctgctc tgctgccgcg
     1261 ccggcatgtc ggtgtgggaa aacgtccacc attgatagct ccggcggcag taatcttgta
     1321 ggggcaaccc gcccggttgc cctcttgcca gcctcaatga agctcatgtc acaaacacca
     1381 tctgaaccat accttttctc agaggctagc ctatttagcc aagccatgca ggccggtgaa
     1441 ttcacattcc tcgcccaaga tgcgcgcggc ccggatgggg ttgtgagagc cgcgccatcc
     1501 gccgaggaac aaacccgcca atgtctcctc aatctcgacg tcgcgctgca tccgcttggc
     1561 gtatcgaccg ctgatgtggt cagcctcgcg gtctatattg ccgactacgg cgatgccgcc
     1621 gccgtggcca agacgttacg tgctcgcttc ggcaacgacg cgccagcggt gaatttcgtc
     1681 ggcgtctgcg ccctcgacgg cggctgccgc gtgcgtatgg atgccatcg
//
LOCUS       DATIRS010000533         3469 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1515415, whole genome shotgun sequence.
ACCESSION   DATIRS010000533 DATIRS010000000
VERSION     DATIRS010000533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3469)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3469)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3469
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1515415"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            80..1555
                     /locus_tag="VLM90_06715"
     CDS             80..1555
                     /locus_tag="VLM90_06715"
                     /inference="COORDINATES: protein motif:HMM:NF012885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12690.1"
                     /translation="MDEIRFVDTTLRDGHQSLWAEGMLTGMILPIAERMDQAGFEAIE
                     LIAPSFFKKACREFKEDIWERLRLVRQRVAKTPLRGIRNRYMAGFQVTPACATQLWLE
                     RLAANGIRELRSSDPSNTAANWAEMVRSANEVGVATIINLTFSESPKHSDGYYVERAR
                     QAAALRPARICIKDPGALLTPDRTRTLVPAVLGAVGNVPLEFHTHCITGLGPMCCYEA
                     IKLGIRSINTAIPPLANGSSNPSLFTVARNARALGYRTAIDEAVLTPVERHFNFIAKR
                     EGFTPGAPREYDSYHYRHQVPGGMISNFRFQLGKLGMAHRVGEVLEEVARVRQELGYP
                     IMVTPYSQFVGVQAAMNVILGERYKECTDEVIQYALGTWGEEESASIDADVKDQILNR
                     PRARELKNGQAPELTLQQFRVKLAGTGVSDDELLLRFFAGKDDVERMKGAAPVRAYLS
                     GQQPLVLLIGELSKQKKFRQVVVRRGDLAIRLERQGSAGKL"
     gene            complement(1599..2084)
                     /locus_tag="VLM90_06720"
     CDS             complement(1599..2084)
                     /locus_tag="VLM90_06720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12691.1"
                     /translation="MAPRYNHALELRTIGQQLAKQNIDIFDLRYDDGDYVLVCGDPNP
                     PFTDLIHLRYSTFELKSLEFRAIETRSSEFKYVEFTGLGEILRTIGRHVERLEAKLVS
                     ISAPDSISDGSIFKIEYETRMGRYRSEDMVANDIASLAMRMYKERAHINGGSREGRSA
                     T"
     gene            2268..>3469
                     /locus_tag="VLM90_06725"
     CDS             2268..>3469
                     /locus_tag="VLM90_06725"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12692.1"
                     /translation="MVDLKPSDPTERRAIYGYDQFLTLYFPAFVFALGYSIATPAIPV
                     FAKSFDKGFAVASLVIVMHALGGLIAAVPSGFLIDRIGRRPVLLIGPLLMALSSILTS
                     LAGSFTQLLAYRFIGGAAMEMWRQARLAMVADVGKQRQRGRQMTGMIGTEGAGRLIGP
                     ALGGVLAGWSIRVPFVVHGILSVLAILPSIFLLRESAPSPKAKHGVDADSHPSTREII
                     ALMWNRRYRGFFCAQFFASMTRGVLWGGTMLLYATFAYDVGPQGLGGLATMSTVVGIP
                     ITLCCGYLMDRFGRKTTMVPGFALMALGLFFLAAGADWQWGFVYFIGGFLWVHCGQAV
                     TAGSMQVLGSDMAPANARGRFFGFWRLIGEIGGLVSPAMFGFVADQVSYAAAFSMTAF
                     FALITAAL"
BASE COUNT          627 a          971 c         1077 g          794 t
ORIGIN      
        1 tggacgagaa tggcgcgcac tacggccagg cggcgacgtt tagcgcgtgg aagtatgtcg
       61 atggcgaagg cacatgatca tggatgagat tcgcttcgtc gatactacgc tgcgtgatgg
      121 ccatcagagt ttgtgggccg aaggaatgct gacggggatg attctgccga tcgccgagcg
      181 catggatcag gctgggttcg aagccatcga actcatcgcg ccgtcgtttt ttaaaaaagc
      241 ttgccgagaa ttcaaggaag acatctggga gcgacttcgc ctggtgcgcc agcgcgtcgc
      301 caagacgccg ctgcgcggta tccgcaatcg ctatatggcg ggcttccagg tgacgccggc
      361 ttgtgcgacc cagctgtggc tggagcggct cgccgccaat ggcattcgcg agctgcgcag
      421 ctccgatccg tccaataccg cggccaattg ggctgagatg gtgcgctcgg caaatgaagt
      481 gggtgtagcg acgattatca acctcacttt ttccgagtcg cccaagcatt cggatggtta
      541 ttacgttgag cgcgcgcggc aggcggcggc gctgcgaccg gcacgcatct gcatcaaaga
      601 ccctggcgct ctgttgacgc ctgatcgaac tcgaaccttg gtccccgcag tgcttggcgc
      661 tgtcggcaat gtcccgctcg agtttcatac ccattgcatt accgggcttg ggcccatgtg
      721 ctgctatgag gcgatcaagc taggcatccg ctcgatcaac accgccatcc caccgctagc
      781 caacggctca tcgaatccgt cgctattcac ggttgcgaga aacgcccggg cattaggcta
      841 tcgcaccgcc attgatgaag cggtgctaac gccggtggaa aggcatttca attttatcgc
      901 caagcgcgag ggttttactc ccggagcgcc gcgcgaatac gatagctatc actaccgcca
      961 ccaagttccc ggcgggatga tttccaactt tcgttttcag cttggcaagc tcggtatggc
     1021 tcatcgcgtt ggcgaagtgt tggaggaagt cgcccgggtg cgccaggagt tgggctatcc
     1081 gatcatggtc acgccgtact cgcagttcgt cggcgtccag gcggcgatga atgtcattct
     1141 cggcgagcgc tataaagaat gcaccgacga agtgattcag tacgcgctcg gaacctgggg
     1201 cgaggaagaa agcgcatcca tcgacgccga tgtgaaggac caaattctca accggccgcg
     1261 ggcgcgggag ttgaagaacg gccaagcgcc ggagctcacg ctgcaacaat ttcgcgtcaa
     1321 gttggctggc accggagtct ccgacgacga attgttattg cgcttctttg ccggcaagga
     1381 cgatgtcgag cggatgaaag gtgcggcacc ggtgcgcgcg tacttgagcg ggcaacagcc
     1441 actggtgcta ctgatcgggg aactgagtaa gcagaaaaag ttccgtcaag ttgtcgtgcg
     1501 gcgcggcgat ctggcgatcc gcctggagcg ccaggggagt gcgggcaaac tttagatcgg
     1561 ttggcgcagc cctcgctccg atagattggc cggcaaagtt aggtcgcgga gcggccttcg
     1621 cgagaaccgc cgttgatatg ggcgcgctct ttatacatgc gcatggccag actggcgata
     1681 tcgttggcaa ccatatcctc gctgcgatat cgacccatgc gggtttcgta ttcgatcttg
     1741 aagatgctgc cgtcggatat ggaatccggc gccgagatac tcactaattt ggcctcgagt
     1801 cgctcgacat ggcggccgat ggtgcggagg atttctccca gacctgtgaa ctccacgtac
     1861 ttgaattcgg agcttcgtgt ctcgatggca cggaattcca gggatttgag ctcgaaggtt
     1921 gaatatctga gatggatcag atcggtgaaa ggcggattcg gatcgccgca gaccaggaca
     1981 taatcgccgt catcgtagcg caaatcgaag atgtcgatgt tttgcttggc gagctgttgg
     2041 ccgatggtgc gcagctcgag tgcgtggttg taccggggcg ccatagatcg tggttgtaac
     2101 gtattagctt gctccctgca agccaaaaat tgggcctagc ccggccgcga cgttgcacgg
     2161 ctgtgctaat ccgttaatat tcagtggctg cgctcgggcg cagcaatttt tttgagctac
     2221 gacgctttct ttttctaatt aaactggaaa gtgccgcgca ttccggcatg gtcgatctca
     2281 aaccatcaga cccaacagaa cggcgcgcca tctatggcta cgatcagttt ctcacgctgt
     2341 atttccccgc ctttgttttc gctctgggct acagcatcgc gaccccggct attcccgtgt
     2401 tcgccaagtc cttcgacaag ggtttcgccg tcgcttcgtt ggtgatcgtc atgcacgcct
     2461 tgggtgggct gatcgccgcc gtacccagcg gatttctcat cgaccggatc ggccgccggc
     2521 cggtgctgct catcggcccg ctattgatgg cgctgtcgtc gattctaacc tcgttggctg
     2581 gctcgtttac gcagttgctg gcctatcgct tcatcggcgg cgcggccatg gagatgtggc
     2641 gtcaagcgcg cttggcgatg gtcgccgatg tcggcaaaca gcgccaacgc ggccgccaga
     2701 tgacgggcat gatcggcacc gaaggggcag gacggctgat cggcccggcg ttgggcggcg
     2761 tgctggcggg ctggagtatc cgcgtgcctt ttgtcgtgca cggaattttg tccgtgctgg
     2821 cgatcctgcc gagcatcttt ctattgcgcg agtcggcgcc cagccccaag gctaaacatg
     2881 gcgtggacgc ggacagccac ccgagtacac gtgaaataat cgccctgatg tggaatcgcc
     2941 gttaccgcgg ttttttctgc gcgcaatttt ttgcctcgat gacccgtggt gtactgtggg
     3001 gcggcaccat gttgctctat gccacctttg cctacgatgt cggcccccag ggattggggg
     3061 gtctggcgac catgagcacc gtcgtcggca ttccgattac gctctgctgc ggctacttga
     3121 tggaccgctt cggccgcaag accaccatgg ttcccggttt cgccttgatg gcgcttggcc
     3181 tgttttttct cgccgccggc gccgattggc agtggggttt tgtttatttc atcggcggtt
     3241 ttctttgggt gcattgcggc caggcggtca ccgcgggcag catgcaggtg ttaggctcgg
     3301 atatggcgcc ggccaacgcc cgtggacgct tctttggctt ctggcgcttg atcggtgaga
     3361 tcggcggctt ggtcagcccc gcgatgttcg gattcgtcgc cgatcaggta tcttatgccg
     3421 cagcctttag catgacggct tttttcgcct tgatcactgc ggcgctgtt
//
LOCUS       DATIRS010000534         2616 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1515455, whole genome shotgun sequence.
ACCESSION   DATIRS010000534 DATIRS010000000
VERSION     DATIRS010000534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2616
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1515455"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(110..1039)
                     /locus_tag="VLM90_06730"
     CDS             complement(110..1039)
                     /locus_tag="VLM90_06730"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12693.1"
                     /translation="MILVWGQSIGAQTIEKVRIGMPSLSLSFIAPQLAYAKGFFREEG
                     IDAEIIRIATNIGIVAVTTKEIGYTTAVGAALRAGVKGLPIKVVTYFNGRPLHVLVAK
                     RELKSVGELRGKIIGFAGYGDSTEYMLRAMLAQAGMTLDKDVQAFQVSGSGQRVQTLL
                     AGRLDAAILPPPFNFEAESKGFVRLMAAADVFETSVSGLALHNDTLKEKPGQVKKMLR
                     ALLKAQNFIRGNKTDSVRVIADWLKLEPAIAQASYDIYVKGMSLNGVVGERVLESDIE
                     RARRDQQVKEAVAVGRVVEFAVLREALQELGMR"
     gene            complement(1323..2225)
                     /locus_tag="VLM90_06735"
     CDS             complement(1323..2225)
                     /locus_tag="VLM90_06735"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12694.1"
                     /translation="MAADKIRIAVANFNVSFMMTGVAVKKGFFRDEGLEPEIIAMRPP
                     VSITALASGDIDYTTVFGSVVRAAVRGLPVRVVASFIDGSTHALLARQEFKAVKDLRG
                     RTMGVGSYGASDDISARMMVRHHGVDPDKQMKIVALGSDRARFAALKEGIVDATVVAP
                     PVDSEGRKAGFNILARAYEIFTFPFVGLGTSVKRITERPDEVKRTIKALVRANRFIRD
                     NRDESIQILAQWGRSERSAAAAAYDSSVKVFNVDGAIPESGLRLVLDQAKAEANLSRE
                     IAVAEVAELSLLREVQKELGIKGR"
     gene            complement(2288..>2616)
                     /locus_tag="VLM90_06740"
     CDS             complement(2288..>2616)
                     /locus_tag="VLM90_06740"
                     /inference="COORDINATES: protein motif:HMM:NF013923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HSQ12695.1"
                     /translation="DNRAMSACNYLAFEANEKSVLTVEGVARGDELDPLQEAFIRNIG
                     AQCGYCTPGQIMAAKALLMENPNPTREQVTEWLSGNICRCGAYGAIGQSILEAAAAYR
                     SEKERR"
BASE COUNT          559 a          822 c          672 g          563 t
ORIGIN      
        1 gaaaagaggg gttaggggag attttcttta tcggcaacgc accacgcaga gaaatagatt
       61 ccccaagctc ccctttttca agaggaaaaa aaatcgccac gggtaacatc tacctcatcc
      121 ccaactcttg caatgcctcg cgcagcacgg cgaattccac gaccctgccg accgccaccg
      181 cttctttgac ctgctgatcg cgccgtgccc gttcgatatc actttcaagg actcgctcgc
      241 caactacgcc gttcaagctc atccctttga cgtaaatatc ataggacgcc tgggcgatag
      301 cgggttcgag cttcagccaa tcggcgatga cgcgcacgct gtcggttttg ttgccgcgga
      361 taaaattctg tgctttcaac agtgcacgga gcattttttt aacttggccg ggcttctctt
      421 ttagcgtgtc gttgtgcagt gccagccccg agacgctggt ctcaaataca tccgcagcgg
      481 ccatcaaacg cacgaagcct ttgctctccg cctcgaaatt gaacggcggc ggcaggattg
      541 ccgcgtcgag tctaccggcg agcagcgttt gaacgcgctg gccgctgcct gacacttgga
      601 aagcctgaac atctttgtct agcgtcatac ccgcctgcgc cagcatggcg cgtaacatat
      661 attctgtgga gtcgccgtag ccggcaaaac caattatctt gccgcgcagt tcgccaacgg
      721 attttaactc ccgcttggcg accagcacat gcaacggccg gccgttaaaa taggtgacaa
      781 ccttgattgg caggcctttg acgccggcgc gcaacgccgc gccgacggcg gtggtgtagc
      841 cgatctcttt ggtggtgacg gcgacgatgc cgatgttggt ggcgatgcgg ataatctcgg
      901 catcgatgcc ttcttcacgg aagaaaccct tggcataggc aagttgcggc gcgataaaac
      961 tcagtgacaa gctcggcatg ccgatgcgaa ctttttcaat ggtttgggcg ccaatggatt
     1021 gcccccagac caaaatcaaa aagaatgcga tagtatgagc taatgtcctg ccccggaaat
     1081 atgtaaaaca agtcggcggt cttctcatcg tcatgccggc gcaggccggc atccaggttc
     1141 gcgatttttc tgctttccgg gtcgcgctag ctagcaccag cttgcccgga atgacgaatg
     1201 tttgaagttt catttccatt tcattcccaa ctctcgcagt gcttcgcgca acggccccag
     1261 gtcggtgacg tcactcaaaa caaactatcg cgtcgctttc atctctttgg ccgcttgctc
     1321 gatcatcgtc ccttgatgcc caactctttt tgcacttcgc gcagcaaaga caactcggcg
     1381 acctcggcga ccgctatctc gcggctgaga ttggcctcag ccttggcctg atccaacacc
     1441 agacgcaagc cgctctcggg aatcgcgccg tcgacattga acacttttac cgacgaatcg
     1501 taagccgcgg ccgccgcgct tcgttcgctg cgaccccact gggccaagat ttgaatcgat
     1561 tcgtcgcggt tgtcgcggat gaagcggttg gcgcgcacca aggctttaat ggttcgcttc
     1621 acttcatcgg gacgctcggt gattcttttc acgctggtgc ccaagccgac aaacggaaag
     1681 gtaaatatct cataggcgcg ggcgagaata ttaaatcccg ccttgcgccc ttcagagtcc
     1741 accggtggcg cgaccaccgt ggcatcgacg atgccctcct tcaaagccgc aaagcgcgct
     1801 cgatccgatc ccaaggcgac gatcttcatc tgtttgtccg ggtcgacgcc gtggtggcgc
     1861 accatcatgc gcgccgagat atcgtccgag gcgccgtaag aaccgacacc cattgtccgt
     1921 ccccgcaagt ctttgaccgc cttgaactcc tgtcgagcca gcagcgcatg cgtcgagcca
     1981 tcgataaaac tggcaacgac acgcaccggc aagccgcgca ccgccgcccg caccaccgag
     2041 ccaaacaccg tcgtataatc gatatcgccg ctcgccaacg ccgtaatcga aaccggcggg
     2101 cgcatggcga tgatctccgg ctccagtccc tcatcgcgga aaaacccttt tttaaccgcg
     2161 acaccggtca tcatgaaaga aacgttgaag ttagccacgg caatgcggat cttatccgcg
     2221 gccaagagtt cacctccgcc caaacaaaac accccgaccg tcaaacagct caaccactgc
     2281 cgcgtcatca tcttctttcc ttctctgacc gataggccgc cgccgcttcg agaatcgatt
     2341 gcccgatggc gccataggcg ccgcagcggc agatgttgcc gctcagccac tcggtgacct
     2401 gctcgcgagt cggattcgga ttctccatca acagcgcctt cgccgccatg atctgccccg
     2461 gcgtgcaata accgcattgc gcgccgatgt tgcggataaa agcttcttgg agcggatcga
     2521 gttcatcgcc gcgagcgacg ccttcgacgg tgagcaccga tttttcattg gcttcgaagg
     2581 ccaagtaatt acacgcactc atcgcgcgat tatcga
//
LOCUS       DATIRS010000535         4812 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_335613, whole genome shotgun sequence.
ACCESSION   DATIRS010000535 DATIRS010000000
VERSION     DATIRS010000535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4812)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4812)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4812
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_335613"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            78..923
                     /locus_tag="VLM90_06745"
     CDS             78..923
                     /locus_tag="VLM90_06745"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12696.1"
                     /translation="MRNAIDIMYYVATPEFIQRWNDAKKGELICRMEKAIGGLPQFDS
                     FDAMLAKMDEAGVAKVFITQTKMWSYRNKWMYMDTQLEEVAQYTRRYPDRFVGLAGYN
                     PFRIKESLAEIDCAVKEHGFKGVYIHIYGFDIPLHDAKMYPLYAKCDELKIPVSIQVG
                     HVLEAMPSEHARPIYLDRIASDFPELKIVGAHTGWPWVEELISVCYKWDNVYFGVDAW
                     MPKYLKPEIIHYINSRMGQDRCLWGTNGLPWKESLDQWDEMGLKEATKKKLLRDNAAE
                     LFGLS"
     gene            944..1192
                     /locus_tag="VLM90_06750"
     CDS             944..1192
                     /locus_tag="VLM90_06750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12697.1"
                     /translation="MMCRFLCADFELTLKCPIDKTDHNVRFQAYPQSRDHGLDVVACD
                     GATEVEQLTCGKNCRALLESGHYWQRIYPETVGYTQSQ"
     gene            1402..2181
                     /locus_tag="VLM90_06755"
     CDS             1402..2181
                     /locus_tag="VLM90_06755"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HSQ12698.1"
                     /translation="MYQTLQYREDGAVATIRLNRPQKKNSFNGAMRQELAQALQAIAR
                     KSELRAVVVTGGDEIFCAGADISEMGGTPSAESSYHHAREFQILFDQVESLPQPVIAA
                     VSGYALGGGCELALAADFRIASETARFGLPEIRIGAFPGGGGTQRLTRLVGTAKAKEM
                     ILLGDPISAQDALAIGLVMKVTATEQYLKEACSLAAKLAALPRLALQASKMLINRSQE
                     VDLATGLEFEARTFGAIAHTHDLAEGTQAFLEKRQANFTGY"
     gene            2241..3035
                     /locus_tag="VLM90_06760"
     CDS             2241..3035
                     /locus_tag="VLM90_06760"
                     /inference="COORDINATES: protein motif:HMM:NF006107.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase family protein"
                     /protein_id="HSQ12699.1"
                     /translation="MTYDSFVFENNDGVATIRLNDPERLNALTFKTYGDLEKIFADLA
                     QDNSVKVVVLTGTGKGFCSGGRVDDIIGPLLKMKGDELYKFTRMTCNVVKNMRNLKKP
                     IIAAVNGIAAGAGAMLMLASDLRIFSDKARAAFLFVKVGLSGADMGALYLLPRIVGLG
                     KATELVFFGDTIDAQEAQRIGLANRVVPGDALMDEAYKWAGRLKDGPLYALGVTKELF
                     EYEANVGLETALEMEAAAQARCMETPDFIEGYNAFVEKRPLRFNRG"
     gene            3059..3508
                     /locus_tag="VLM90_06765"
     CDS             3059..3508
                     /locus_tag="VLM90_06765"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSQ12700.1"
                     /translation="MAKTIHIRSLEKGDLAAIVNMEERQTGVARPDYWEKRLEISEAI
                     RPHWASLVAEYDNRVVGFILGRAGEHEFGLPGTVAWVEMIGVDPAYRRRGIAEELMEQ
                     FTESAEDHGIKTIFTLIDPNRAELQHFFSQLGFMHGKMLHYQKDLAG"
     gene            3735..>4812
                     /locus_tag="VLM90_06770"
     CDS             3735..>4812
                     /locus_tag="VLM90_06770"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSQ12701.1"
                     /translation="MDFELPEELAEVQKLARDFSEKEIAPSAAKDDREHIFRRDLVVK
                     MGELGFYGCLIPEQYGGNGLGFLAHTLISEEIARAHSAIRVYLNMQAGPAVTVCEFGN
                     EEQKKKYLPRLLSGESIGLFAITEPDAGSDVAAMKTTAKRDGKDYLINGTKIWITNAT
                     VADAGVIFAYTNRAEKHRGMSAFYADLNQPGVDRRDLDKLGAHASPTGELTFDNFRIP
                     AANLIGQEGDGFKICMRHLNHTRLGCAAGAVGLAKAAREAAVSYANQREQFGQKIGQF
                     QMNQDLIAQMLVQEESSRLLVYRAACLADRGRPYNLEVSMAKYAAAEAAAFCADSALK
                     ILGAYGYSTEFPVERYYRDAKSYQI"
BASE COUNT         1144 a         1361 c         1341 g          966 t
ORIGIN      
        1 caattcaaca acgactcgag tcttcaatta tcaattatca attctcaatt atccattatc
       61 cattccttga cgtagttatg cgaaatgcca tcgacatcat gtactacgtc gccacgccgg
      121 agttcattca gcgctggaac gacgcgaaaa aaggcgagct gatttgccgc atggaaaaag
      181 ccatcggcgg cctgccgcag ttcgacagtt tcgacgccat gctcgccaaa atggacgaag
      241 ccggcgtggc aaaagttttt atcacccaga ccaagatgtg gtcgtaccgc aacaagtgga
      301 tgtacatgga cacccagctc gaagaagtcg cccagtacac ccgccgttat cccgaccgct
      361 tcgtcgggct cgccggttac aacccctttc gcatcaagga gtctctcgcc gaaatcgact
      421 gcgcggtcaa agagcatggc ttcaagggcg tctacatcca catttacggt ttcgacattc
      481 cgctgcacga tgcgaaaatg tatccgctct acgccaagtg cgacgagctc aagattcccg
      541 tatccataca agtcggtcat gtcttggaag cgatgccgag cgagcatgcc cggccgattt
      601 atttggaccg catcgccagc gactttcccg agctgaaaat cgtcggcgcc cacaccggct
      661 ggccttgggt cgaggaactg atttccgtct gttacaaatg ggataacgtt tatttcggcg
      721 tcgatgcttg gatgccgaaa tacttaaagc cggagatcat ccactacatc aacagccgca
      781 tgggccagga ccgctgcctg tggggcacca acggcttgcc ctggaaagaa agcctcgatc
      841 agtgggatga gatggggctc aaggaagcga ccaagaaaaa actgctacga gacaacgccg
      901 cggagctgtt tggtctcagt taacgcagcg aaaggagaac gccatgatgt gccgattctt
      961 atgcgccgat ttcgaactca cattaaaatg tcctatcgac aagactgatc ataacgtccg
     1021 attccaggct tacccgcagt cgcgcgacca tgggttggac gtcgtcgcct gcgatggcgc
     1081 aaccgaggtc gagcagttga cctgcggcaa aaattgccgg gcactgcttg aaagcggtca
     1141 ttactggcaa aggatttatc cggaaacggt gggttacaca cagagccaat gatcagctta
     1201 ggactttggc tcttcaggct ttcctgtgaa tcagggctcg gagattacag cgcggaggcg
     1261 ctgaggacgc ggagtaaaga gttcttgata aagaaatact ccgaactttg cgaactctgt
     1321 gcctctgtgg tgaatacttc ttcacaggaa acccggaaga acctggattt tagaccgagc
     1381 cgcaacagga gcgaatgagt catgtatcaa acgctgcaat accgcgaaga cggcgcggtg
     1441 gcgacgatcc gactgaaccg gccgcaaaaa aagaattctt tcaatggcgc gatgcgccaa
     1501 gagttggcgc aggcgcttca agcgatcgcg cgcaagtccg agctgcgagc ggtagtcgtc
     1561 accggtggcg acgagatttt ttgcgccggg gcggacatta gcgaaatggg cggaacccca
     1621 agcgcggaat cctcctatca ccacgcccgc gagtttcaaa ttcttttcga tcaagtcgaa
     1681 tcgctgcccc aaccggtgat cgccgcggtt tcggggtatg cattgggtgg cggctgcgaa
     1741 ttggctttag ctgcggattt ccgcatcgct tcggaaacgg cgcgctttgg cctgccggaa
     1801 atcaggatcg gcgctttccc cggcggcggc ggcacgcaaa gactgacacg tctggtcggc
     1861 accgccaagg ccaaagaaat gattctcctc ggcgatccca tcagcgcgca agacgcgctc
     1921 gccatcggtt tggtcatgaa agttacggcg acggaacagt atttaaaaga agcctgtagc
     1981 cttgccgcca agcttgccgc cctgccccgt ctcgctctgc aagcatcgaa gatgttgatc
     2041 aatcgcagcc aggaggtcga cctggcgacg ggtctggagt tcgaagcgcg cactttcggc
     2101 gccatcgcgc atacccatga cctagccgaa ggtacgcaag ccttcttgga aaagcgccag
     2161 gcgaatttca ccggctattg attctacccg agaatcaact atcgtcgccg caaaatttat
     2221 cacgaggaga cacagacacg atgacctacg atagctttgt tttcgaaaat aatgacggcg
     2281 ttgcgacgat acgcttgaac gatccggaac ggctgaatgc gcttacgttc aagacctacg
     2341 gcgatctgga aaagattttt gccgatctag cgcaggacaa cagcgttaag gtcgtcgttc
     2401 tcaccgggac cggcaaaggt ttttgttcgg gcggccgggt cgacgacatc atcggcccgc
     2461 tgctcaaaat gaaaggcgac gagctttaca aattcacccg catgacctgc aacgtcgtca
     2521 agaacatgcg caacttaaaa aagccgatca ttgccgcggt caacggtatc gccgccggcg
     2581 ccggcgccat gctcatgctg gcgtccgacc tgcgcatctt ctcggataaa gcgcgggccg
     2641 cttttctttt tgtcaaagtt ggcttgtccg gggccgatat gggcgcgcta tatttgctgc
     2701 cgagaattgt cgggctgggc aaagcgactg agctagtctt cttcggcgat accatcgacg
     2761 cccaagaagc ccagcgcatc ggcctggcca atcgtgtcgt gcccggcgac gcgttgatgg
     2821 acgaagcgta caaatgggcg gggcgactca aagacgggcc gctttacgct ctcggcgtga
     2881 ccaaagagct gttcgaatac gaagccaacg tcggtctaga gaccgcgctg gagatggaag
     2941 cggcggcgca ggcgagatgc atggagacgc ctgacttcat cgagggctac aacgcctttg
     3001 tcgaaaagcg gccgctgcgc tttaaccgcg gctgagcgcg gcacaggagg aaaacatcat
     3061 ggcaaaaact attcacatca gaagtctcga aaagggtgat ctcgcggcga tcgtcaacat
     3121 ggaagaacgc caaaccggcg tcgctcggcc cgactattgg gaaaaacggc tggagatttc
     3181 cgaagccatc cggccgcact gggcatcgct ggtcgccgaa tacgataacc gtgtcgtcgg
     3241 attcatcctg ggccgggccg gtgaacatga gtttggcctg ccgggtacgg tggcgtgggt
     3301 cgagatgatc ggcgtcgatc cagcctatcg ccgccgcggc atcgccgaag aactgatgga
     3361 acagttcacc gaatcggccg aagaccacgg catcaaaacc atcttcacgc tgatcgatcc
     3421 gaaccgagct gaattgcaac attttttcag ccagctcggt ttcatgcacg gcaagatgtt
     3481 gcactatcaa aaggatctgg ccggctgaac taaggctaac cacattatga actcgctgca
     3541 atgtcgttgg ttcaaagcga atgttcccca tccgtcattc gggcggaggc cggaatccat
     3601 ctttgatgtc atcgcgatct tccagcgaaa tgcaattcat ggatgccggc ctgcgccggc
     3661 atgacgatgc ttgatcttgg ggagcgaacc acggagtcac gactcgaagg tgatgaccaa
     3721 aacggagccg cttaatggat ttcgagttgc ccgaagaatt ggccgaggta caaaagctag
     3781 cgcgcgactt tagcgaaaaa gaaatcgcac ctagcgcagc aaaagacgac cgagagcata
     3841 tctttcgccg agacctcgtc gttaaaatgg gtgagctagg tttctacggc tgtctgattc
     3901 cggaacaata cggcggcaat ggtctcggtt ttctcgctca cacgctgatc tcggaagaga
     3961 tcgcccgcgc gcacagcgcc atccgagttt acctaaacat gcaagcgggc cccgccgtga
     4021 cagtttgcga attcggcaac gaagaacaga agaaaaaata tctcccgcgg cttctgagcg
     4081 gcgaatccat tggattgttc gccatcaccg agcccgatgc gggatcggac gtggcggcga
     4141 tgaagaccac cgccaagcgc gacggcaaag actatctaat taacggcacc aagatctgga
     4201 tcaccaacgc cacggttgcc gatgccggcg tcatctttgc ctataccaat cgcgccgaga
     4261 agcatcgcgg catgtcggcg ttctacgccg acttgaatca gccgggtgtg gaccggcgcg
     4321 acctcgacaa gctgggcgcc cacgcctcgc cgaccggcga gctgacgttc gataattttc
     4381 gcattccagc ggcaaacttg atcggccaag aaggcgatgg cttcaaaatc tgcatgcgcc
     4441 acttgaatca tacccgcctc ggctgcgccg ccggcgccgt cggcctcgct aaagccgccc
     4501 gcgaagcagc agtcagttac gccaaccagc gcgagcagtt cggccaaaaa atcggccaat
     4561 ttcaaatgaa tcaggatttg atcgcgcaga tgctcgtcca ggaagaatca tcgcggctgc
     4621 ttgtttaccg cgccgcttgt ctcgccgacc gtgggcgacc ctacaacttg gaagtctcca
     4681 tggcgaaata cgccgccgcc gaagcggctg cgttttgcgc cgacagcgcg ctcaagattc
     4741 ttggcgctta cggctactcg acggaatttc ccgtcgagcg ctactatcgc gatgccaaat
     4801 cctatcagat cg
//
LOCUS       DATIRS010000536         1856 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1417416, whole genome shotgun sequence.
ACCESSION   DATIRS010000536 DATIRS010000000
VERSION     DATIRS010000536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1856
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1417416"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..510
                     /locus_tag="VLM90_06775"
     CDS             <1..510
                     /locus_tag="VLM90_06775"
                     /inference="COORDINATES: protein motif:HMM:NF013067.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HSQ12702.1"
                     /translation="GFTPLEGLVMGTRSGDIDPALVTYLARQENVGAAEVERWLNHRS
                     GLLGLSGLSNDMRELLAAYDAHPRARLAVEVFCYRARKYLGAYLAALGGAQAVIFSGG
                     IGENASAVRQKICAGMEWCGLSLDRQKNDAAIGVEGAISTAGARLQVHVIPSDEEAII
                     ARDTARLIQ"
     gene            866..>1856
                     /locus_tag="VLM90_06780"
     CDS             866..>1856
                     /locus_tag="VLM90_06780"
                     /inference="COORDINATES: protein motif:HMM:NF020921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoketolase family protein"
                     /protein_id="HSQ12703.1"
                     /translation="MANVLSENEITALDAYWRAANYLSVGQIYLLDNPLLKEPLKPAH
                     IKPRLLGHWGTTPGLNFIYAHLNRVICKNDLSMIYIAGPGHGGPGIVANVYLEGTYSE
                     VYPNISQDEEGIKKLFKQFSFPGGIPSHVAPEKPGSIHEGGELGYALTHAYGAAFDNP
                     DLVVACVIGDGEAETGPLATAWHSNKFLNPASDGAVLPILHLNGYKIASPTVLARISK
                     EELESLFRGYGYNPYFVEGHEPMAMHETMAATFDTACAEIKAIQDDARRNGVTQRPRW
                     PMIVLRTPKGWTGPKQVDGEQVEGTWRAHQVPMGEMESPEHLRILEDWMKSYRP"
BASE COUNT          390 a          541 c          578 g          347 t
ORIGIN      
        1 ggattcacgc ccctcgaagg gttggtgatg ggcacgcgct ccggcgacat cgatccggcg
       61 ctggtgacct acctggcgcg ccaggaaaat gtcggcgccg ccgaggtcga acgctggctc
      121 aaccatcgct ccggcctgct cggcttgtcc gggctttcca acgacatgcg tgagctgctc
      181 gccgcttatg atgcccatcc gcgcgcgcgt ctcgccgtgg aagtgttttg ctatcgggcg
      241 cgcaaatatt taggcgcgta cctggccgct ctcggcggcg cgcaggcggt gatcttcagc
      301 ggcggcatcg gcgagaatgc gtccgcggtg cgccaaaaaa tctgcgccgg tatggaatgg
      361 tgtggcttga gcctggatcg ccagaagaac gatgccgcca tcggcgtcga aggcgcgatt
      421 tcgaccgccg gggcgcgcct tcaagtccat gtgattccga gcgacgagga agcgatcatc
      481 gcacgcgata cggcacggct gattcaatga aaacgacggc gcggggcgaa atcgccggag
      541 cgaaatgcca tcctggttgg agagacggcg cgaaaactgg tctcggtcat tcgggagtct
      601 cagaatgaac agctcggtaa aaagtagcag ttcgctgaag aaagcttcgg gatgcttcga
      661 gtgctcatgt ttcggcatcc tcaccagagc ggaagattct cgatgatatc aaagttcctc
      721 tgttcgcccc gtcgaaggac tccgaaataa tttttcagcg ctctggtaag tttgtaatgc
      781 gcgcgtcgcg agtccgtcga acgatgggga gtttagccgg cgccgtgagt gaaggtctaa
      841 ccgtttactc gatagggaga tagtcatggc caacgtcctt tccgaaaacg aaattaccgc
      901 cctcgacgcc tactggcgtg ccgccaatta tctgtccgtc gggcaaatct atttactcga
      961 taatccgctg ctcaaggaac cgctcaaacc ggcgcacatc aagccgcggc tgctcggcca
     1021 ctggggcacg acgccagggc tgaactttat ctacgcgcac ctgaatcggg tgatctgcaa
     1081 aaacgatttg agcatgatct atattgccgg gcccggtcat ggcggcccgg gcatcgtcgc
     1141 taacgtctat ctcgaaggca cttatagcga agtttatccc aatatctctc aggacgaaga
     1201 ggggatcaaa aagctgttca agcagttttc gtttcccggc gggattccga gccacgtggc
     1261 gccggaaaag cccggatcga tccacgaggg cggcgagctc ggctacgctc tcacgcatgc
     1321 ctacggcgcg gccttcgaca acccggacct cgtcgttgcc tgcgtgatcg gcgacggcga
     1381 agcggagacc ggaccgctgg cgacggcgtg gcactcgaat aagtttctca acccggcgag
     1441 cgacggcgcg gtgctgccga tcctgcattt aaacggctac aagatcgcca gcccgacggt
     1501 gctcgcgcgc atcagcaagg aagaactgga gagtctgttt cgcggctacg gttacaatcc
     1561 gtattttgtc gaaggccacg agcccatggc gatgcacgaa acgatggcgg cgacgttcga
     1621 tacggcgtgc gccgagatca aagcgatcca ggacgacgcg cgccgcaacg gcgtcaccca
     1681 acggccacgc tggccgatga tcgtcctgcg cacgccgaag ggctggaccg ggccgaagca
     1741 agtcgacggc gaacaagtcg aaggcacctg gcgcgcgcat caagtgccga tgggtgaaat
     1801 ggagtcgccg gagcacttga ggattctcga agactggatg aagagctacc gccccg
//
LOCUS       DATIRS010000537         4478 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1318913, whole genome shotgun sequence.
ACCESSION   DATIRS010000537 DATIRS010000000
VERSION     DATIRS010000537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4478)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4478)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4478
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1318913"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            278..1273
                     /gene="pseB"
                     /locus_tag="VLM90_06785"
     CDS             278..1273
                     /gene="pseB"
                     /locus_tag="VLM90_06785"
                     /EC_number="4.2.1.115"
                     /inference="COORDINATES: protein motif:HMM:TIGR03589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 4,6-dehydratase
                     (inverting)"
                     /protein_id="HSQ12704.1"
                     /translation="MNPKTGGMKNKVVMVTGGTGSFGKQFVETVLRDQTPKKLIIFSR
                     DELKQFDMREHFNEQQFPCMRYFLGDVRDRERLYRAMDGVDIVIHAAALKQVPSAEYN
                     PIEVIKTNVLGGANIIDAAIDRNVQRVIALSTDKAANPINLYGATKLCSDKLFIASNG
                     YSGHHGTRFSVVRYGNVMGSRGSVIPFFQQRRSTGVLPVTDPKMTRFWITLEQAVQFV
                     LACLERMQGGEIFVPKIPSMNIGDLARAIAPECRLDVVGVRPGEKLHETMVPEDDARN
                     AVEYDDCFVIRAPAANGKGNVNGGKPCPPGFHYSSDNNPSWLSVDELQRLVNIHG"
     gene            1278..2507
                     /gene="pseC"
                     /locus_tag="VLM90_06790"
     CDS             1278..2507
                     /gene="pseC"
                     /locus_tag="VLM90_06790"
                     /EC_number="2.6.1.92"
                     /inference="COORDINATES: protein motif:HMM:TIGR03588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4,
                     6-dideoxy-N-acetyl-beta-L-altrosamine transaminase"
                     /protein_id="HSQ12705.1"
                     /translation="MARSPLAIDGGTPVRGKVLPYGHQSIDESDIAAVADALRSDWLT
                     TGPRVREFERAFAASVRAGEAVAVSSGTAALHCAMAALGIGPGDEVIVPAMTFAASAN
                     CVVYQGATPVFADVHGESLLIDPLAVEAKITANTRAIVAVDYAGQPCDYDALRALAQR
                     HRLALVADACHSLGGAYKGRPVGTLADFNIFSLHPVKAMTTGEGGMISCAGFETAHAI
                     RRFRNHGITADHFQREQQGSWLYDMVELGYNYRLSDIQCALGLSQLAKLPHWVERRRE
                     IARRYDAAFKDCPALRPLTVSADREHGYHLYVVQLDGNYLTADRGQIFAALRAEGIGV
                     NVHYLPVHLHPYYRERFATRAGLCPNAEAAYEKILSLPIFPAMSDADVDDAIAACWKV
                     VSHYGHKTQAAAAAGAR"
     gene            2464..4053
                     /gene="pseG"
                     /locus_tag="VLM90_06795"
     CDS             2464..4053
                     /gene="pseG"
                     /locus_tag="VLM90_06795"
                     /EC_number="3.6.1.57"
                     /inference="COORDINATES: protein motif:HMM:TIGR03590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,4-diacetamido-2,4,
                     6-trideoxy-beta-L-altropyranose hydrolase"
                     /protein_id="HSQ12706.1"
                     /translation="MVIKPKLPPLLVRADADGARGIGHVLRSWALAHAWLGQGGAVDF
                     LTSQPPPALRRRMELDGATVSEIVQPCPMDADLEATLATIACRGSDSAALPWVILDGY
                     HFTPTYQDAIRRSGCRLLVIDDTAHLARYDADIVLNHGALAPRLDYQISADAWLLLGT
                     RYALLRAEFERWREFKRPIPATARNILLTLGGADGGNLTVKVMDALALLKDRAVDVQV
                     LAGPLNPHLDALRRHAAATPNMRIHTDVSDPSPLMAWADIAIAAAGTTAWELAFMQTP
                     ALLLVAAENQTGVAAGVAEFAAGQSLGRAETLRRDDIAAALRQLIDDPARRWLMAERG
                     KSLVDGCGPARVLAAMRERQSFNRQSEFKIRRAGVGDALLLWQWANDPLTRRNSFSRA
                     AISWDDHQAWCAKKFAAPDCRWWIMQIGDLPVAQIRYDRVVLDSGVAAEISFSVAPGF
                     RGRRLGTRLLEATAPLAAGELAADSIQAVALQGNEASRRVFLKAGFVAAEARRPDGRL
                     CMIFRRNCDASSARESHASLH"
     gene            4037..>4478
                     /locus_tag="VLM90_06800"
     CDS             4037..>4478
                     /locus_tag="VLM90_06800"
                     /inference="COORDINATES: protein motif:HMM:NF015087.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016051 - carbohydrate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate synthase family protein"
                     /protein_id="HSQ12707.1"
                     /translation="MPAYIEIAGRRIGPGSPVYVIAELSANHGQDYAQALELVHAAKA
                     CGADAVKLQTYTADTLTLDCDNEWFQIHGTLWHGKKLYELYQEAFTPWEWQPKLKRAA
                     DDIGIALFSTPFDLSAVEFLESMEVPAHKIASFENGDIALLQQVA"
BASE COUNT          864 a         1362 c         1350 g          902 t
ORIGIN      
        1 tggcgctgtt aggcggcgag gttacgatcg gcagtaaatt gggcgagggt gcgcgcttca
       61 ccattcggtg cctttcaata ccgcggactt gccttacgac cgcggcaacg ccgtcactgg
      121 cttggggatt gcagtaacaa ccaagaaagc gaaaaaaggc ttgcatggcg gcataccggc
      181 gtcaaattcc agtcacacag tcagatcacc gacggttgcc gcgccagagc tgccgcgccg
      241 tgcagctgaa cacctattcc agcgagggtg aaatattatg aatcccaaga cgggcggtat
      301 gaaaaacaaa gtcgtgatgg tcaccggtgg caccggctcc ttcggcaagc aatttgtcga
      361 gacggtttta cgcgaccaga caccgaaaaa gctgattatt tttagccgcg acgaattgaa
      421 gcaatttgac atgcgcgagc atttcaacga acagcagttt ccctgcatgc gctatttcct
      481 tggcgacgtg cgcgaccgcg agcgcttgta ccgcgccatg gacggcgtag atatcgtgat
      541 tcacgcggcg gcgctcaagc aagtgccgag cgccgaatac aatcccatcg aagtgatcaa
      601 gaccaacgtc ttgggcggcg ccaatatcat cgacgcagcc atcgaccgta atgtacagcg
      661 cgtgatcgcg ctcagcaccg acaaagcggc caacccgatc aatctttacg gtgcgaccaa
      721 gctgtgctcg gataaattat tcatcgcttc caacggctat tccggccacc atggcacccg
      781 gtttagcgtg gtacgttatg gcaacgtcat gggtagccgc ggcagcgtca tcccgttctt
      841 tcaacagcgg cgctccaccg gcgtgttgcc agtgaccgat ccgaagatga cccgtttctg
      901 gattaccttg gagcaggcgg tgcaattcgt tttggcctgc ctcgaacgga tgcagggcgg
      961 cgaaatcttc gtgccgaaaa ttcccagcat gaatattggc gatctggcac gcgccatcgc
     1021 tcccgaatgt cgcctcgatg tggtcggcgt gaggcctggc gaaaaacttc acgaaaccat
     1081 ggtgccggaa gacgatgccc gcaacgccgt ggaatacgac gactgtttcg tcattcgcgc
     1141 gcccgcggcc aacggcaaag gtaatgttaa tggcggcaag ccctgtcctc ccggttttca
     1201 ctatagcagt gataataatc ctagttggct cagtgtcgac gaactgcaac gcctggtgaa
     1261 tattcatggc taatcgaatg gcgcgttccc ctctagcgat tgacggcggc acgccggtgc
     1321 gtggcaaggt gttgccctac ggccaccaaa gcatcgatga gagcgatatt gccgcggtcg
     1381 ccgacgcctt gcgttcggac tggttgacca ccggaccgcg agtgcgcgaa ttcgaacgcg
     1441 ccttcgccgc gtcggtgcgg gcgggcgaag cggtggccgt gagcagcggc acggcggcgc
     1501 tccattgcgc catggccgcg ctcggcattg gccccggcga tgaagtgatc gtgccggcga
     1561 tgacctttgc cgccagcgct aactgcgtcg tctatcaggg cgcgaccccg gtgtttgccg
     1621 atgttcatgg tgaatcatta ttgatcgatc ccctggctgt cgaagcgaag ataaccgcga
     1681 acacgcgagc catcgtcgcc gtcgattacg ccggccagcc ttgcgactac gatgctctgc
     1741 gcgcgctggc gcaacgccat cgtttggcgc tggtcgccga tgcctgccat tcgctgggcg
     1801 gcgcttacaa gggccggccg gtgggcacgc ttgccgattt taatattttc agtctgcatc
     1861 cggtgaaagc catgacgact ggcgagggcg gcatgattag ctgcgccggc ttcgagaccg
     1921 cccacgccat acgccggttt cgcaatcacg gcatcaccgc ggaccatttt caacgcgaac
     1981 aacagggttc ttggctctac gatatggtcg agttgggcta caactaccgc ctgagcgata
     2041 ttcaatgtgc cctcggcttg agtcaattgg ctaagctgcc ccactgggtt gagcgccgcc
     2101 gtgaaatcgc ccggcgttac gatgcggcct tcaaggattg cccggcgctc cggccgctca
     2161 cggtgagcgc cgaccgggaa catggttatc atctctatgt cgtgcaactg gacggcaact
     2221 acctgactgc ggaccggggg caaattttcg ccgccctgcg cgccgaaggc atcggcgtca
     2281 acgtgcatta tttgccggtg catcttcatc cctattaccg cgagcgtttc gccacccgcg
     2341 ccggcctctg ccccaatgcc gaagcggcct acgaaaagat tctttcgctg ccgattttcc
     2401 ccgcgatgag cgacgccgat gtcgacgacg cgatcgccgc ctgttggaag gttgtgagcc
     2461 actatggtca taaaacccaa gctgccgccg ctgctggtgc gcgctgacgc cgatggcgcg
     2521 cgcggcatcg gccatgtgct gcgtagttgg gccttagccc atgcatggct tggacagggc
     2581 ggcgcggtgg actttctcac gtcccagccg ccgccggcac tacggcggcg catggaactt
     2641 gacggcgcca ctgtgagcga gattgtccag ccatgtccca tggacgccga cctcgaggcg
     2701 accctggcaa ccatcgcctg ccgtggctcc gacagcgctg cgctgccttg ggtaattttg
     2761 gacggctacc atttcacgcc gacctatcaa gacgccatcc ggcgcagcgg ttgccggctt
     2821 ctagtaattg acgacaccgc ccatctggcg cgctacgacg ccgacattgt gctcaatcat
     2881 ggcgctctcg cgccgcgtct ggattatcaa atcagcgccg acgcctggct gctcctcggt
     2941 actcgttacg cgctattacg cgcggagttc gaacgctggc gcgagttcaa gcgtcccatt
     3001 ccggcaaccg cgagaaatat tttgctgact ttaggcggtg cggatggtgg caatctaacg
     3061 gtgaaagtga tggacgcctt ggcgttgtta aaagatcgcg ccgtcgacgt gcaagtcctc
     3121 gccggaccgc tcaatcccca tctcgacgcc ctacgccgtc acgccgccgc gacaccgaac
     3181 atgcgaatac acactgatgt tagcgatccg tcgccgctaa tggcttgggc ggatatcgcc
     3241 atcgccgcag cgggcaccac ggcttgggag ttggccttca tgcaaacccc ggcgctgttg
     3301 ttggtggccg cggaaaatca gaccggtgtc gccgccggcg tcgctgaatt cgctgccggc
     3361 caatcgctcg ggcgcgccga aacactgcgt cgtgacgaca tcgccgccgc tctgcgccag
     3421 ttgattgacg accctgcgcg ccgctggctg atggccgagc gcggtaaaag tttagttgac
     3481 ggctgcggtc cggcacgggt gctggcggcg atgcgcgaac gacaaagctt taaccgccag
     3541 agcgagttca agatccggcg cgccggcgtt ggcgacgcgt tgttgctgtg gcagtgggcc
     3601 aacgatccgc ttactcgacg caactccttt tctcgcgctg caattagctg ggacgatcac
     3661 caagcctggt gcgccaagaa atttgccgcg cccgactgcc ggtggtggat catgcagatc
     3721 ggcgacttgc cggtggcgca gatccgctat gaccgcgtgg ttttggatag tggcgtcgcc
     3781 gcggagatca gcttcagtgt cgcgccgggt tttcgtggcc ggcgacttgg cactcgtctg
     3841 ctcgaagcga cggcgccgct cgcagctggt gaactcgcgg cggatagcat tcaagctgtg
     3901 gcgctccagg gcaatgaagc gtcgcgccgg gtatttctta aggcgggatt tgtcgcggcc
     3961 gaagcgcgcc gcccagatgg ccggctatgc atgatattcc gccgtaattg cgatgcgagt
     4021 tccgcgcgcg agagtcatgc cagcctacat tgaaatcgcc ggccggcgaa ttgggccggg
     4081 atcgcctgtc tatgtgatcg ccgaactgtc ggcgaaccat gggcaggact acgcccaagc
     4141 actggaactc gtccatgccg ccaaagcttg cggcgccgac gcggtgaaac tgcaaaccta
     4201 tacggcggat acgctgacac tcgattgtga caacgaatgg tttcaaattc acgggactct
     4261 ttggcacggc aaaaagctct acgagttata tcaggaagcg ttcacgccgt gggaatggca
     4321 gcccaagctt aagcgcgccg ccgacgacat cggcatcgcg ctgttttcca cgcccttcga
     4381 cttgagcgcc gtcgagtttc tcgagtccat ggaggtgccg gcgcataaga tcgcgtcctt
     4441 cgaaaacggc gatatcgcat tactccaaca ggttgcga
//
LOCUS       DATIRS010000538         1810 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_138465, whole genome shotgun sequence.
ACCESSION   DATIRS010000538 DATIRS010000000
VERSION     DATIRS010000538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1810
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138465"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..260
                     /locus_tag="VLM90_06805"
     CDS             <1..260
                     /locus_tag="VLM90_06805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12708.1"
                     /translation="PFNRGLAYMRIDKNDFAARDFTEVIILQPKHADAYVYRGLIRVY
                     QDREKDADADFQKAFQLNPALKKKLEPVIAEAKAKAKKSAK"
     gene            282..701
                     /locus_tag="VLM90_06810"
     CDS             282..701
                     /locus_tag="VLM90_06810"
                     /inference="COORDINATES: protein motif:HMM:NF016064.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE thiosulfate transporter family
                     protein"
                     /protein_id="HSQ12709.1"
                     /translation="MSEANLYGGLIGGLLIGLAATLLLLVNGRIAGISGILAGLIASK
                     FTSEWFWRAAFVIGLVCGAALYAWLRGAMPMQQQAGNSLLLLAGLLVGFGTRTGSGCT
                     SGHGICGLSRRSPRSLAATATFIACGILTVYVMRHVF"
     gene            701..1114
                     /locus_tag="VLM90_06815"
     CDS             701..1114
                     /locus_tag="VLM90_06815"
                     /inference="COORDINATES: protein motif:HMM:NF042761.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6691 family protein"
                     /protein_id="HSQ12710.1"
                     /translation="MLPAISSFAMGILFGLGLSISEMTDPARVIGFLDIAGRWDPTLI
                     YVMGGALAVTLPLFPWIQKRQKPVLGEALQLPSQTRIDARLLIGAALFGVGWGLAGLC
                     PGPALANLASASPGIALFVLAMIAGQWLAIRFSSR"
     gene            1242..>1810
                     /locus_tag="VLM90_06820"
     CDS             1242..>1810
                     /locus_tag="VLM90_06820"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSQ12711.1"
                     /translation="MGETRVDLQHLLEDLRDAYPGSIEETILTEILANSLDSGAAAIR
                     FMTDPAARTLTVVDNGSGMQRRDLARYHNIASSTKTRGEGIGFAGVGIKLGLLVCEEV
                     LTETRRGKTHIASSWHLAARNRAPWKWVPPLNLIVERGTAVRLRLENPLSPLLDPGFL
                     AVTLRRHYQPILDPSFDEFLRGHYPDGIV"
BASE COUNT          359 a          536 c          510 g          405 t
ORIGIN      
        1 cgccgttcaa tcgcggtctg gcctacatgc gtatcgacaa gaacgatttc gccgcgcggg
       61 acttcaccga agtgatcatc ctgcaaccga agcatgccga cgcttacgtc tatcgcggcc
      121 tgatccgggt ctatcaggac cgcgagaaag acgccgacgc cgatttccaa aaagcctttc
      181 agttgaatcc ggcgctaaag aaaaaattgg aaccggtcat cgccgaagcc aaagccaagg
      241 caaaaaaatc ggcgaaatag actcctaagc ggaaaatatt tatgtcggaa gctaatcttt
      301 atgggggttt gatcggcggc ctgctgattg gccttgccgc aactctgctc ctgctcgtca
      361 acggccgcat cgccggcatc tccggtattc ttgcaggttt gatagcttcc aaatttacaa
      421 gcgaatggtt ttggcgcgct gccttcgtca tcgggctggt ctgcggcgcc gccctctacg
      481 cctggcttcg cggcgcaatg cccatgcaac agcaagcggg taattcactg ctgttactcg
      541 ccggactgct cgtcggattt ggcacgagaa cggggtccgg ctgcacttcc ggacatggca
      601 tatgcggtct gtcgcgccgt tcgccgcgct cgctcgcggc cacggcgact ttcatcgctt
      661 gcggcatcct gacggtctat gtgatgaggc atgttttcta atgctgccgg cgatcagcag
      721 ttttgccatg ggcatcttgt tcggcttggg cctgagcatt tcagaaatga ccgatcccgc
      781 gcgggtgatc ggttttctcg acatcgcggg ccgctgggat ccgacgttga tttacgtcat
      841 gggtggggcg ctagcagtta ccctgccgct gttcccatgg attcaaaaac ggcagaaacc
      901 cgttctcggc gaagcgcttc aactgccgag ccaaacccgc atcgatgcgc gcttgctaat
      961 cggcgcggcg ctcttcggtg tcggctgggg tctcgccggt ctctgtcccg gtccggcgct
     1021 ggctaattta gcaagcgctt ctccgggcat cgccttgttt gtgctggcaa tgatcgccgg
     1081 acagtggctg gcgattcgct tcagctcacg atagccggga ccgcatttag ttcccccgtg
     1141 atcgaaaggg agccgattca agtgggtcaa tgctacattg cggcaatact tggtaattca
     1201 tctctaagtt atctaaagac ttgtagttaa aggaatacaa attgggcgag acacgcgtcg
     1261 accttcaaca tttactagaa gatttacggg acgcctatcc cggctccatt gaggaaacca
     1321 ttctcaccga gatcttggcc aactcgctgg actccggtgc cgccgcgatc cgattcatga
     1381 ccgaccccgc cgcgcgcacg ttgacagtcg tcgacaacgg cagcggcatg cagcgccgcg
     1441 acttggcgcg ttatcacaac atcgcgtcga gcaccaagac acgcggtgaa ggcataggct
     1501 tcgccggtgt cggcatcaaa ttgggacttc tggtctgcga ggaagtctta accgaaacac
     1561 gccggggcaa aacccacatc gcgagttcgt ggcacctggc ggcgcgcaat cgcgcgccgt
     1621 ggaagtgggt tccgccgttg aacttgatcg tcgaacgcgg cacggcggtg cgattgcgcc
     1681 tagaaaatcc cttgtcaccg ctcctcgatc ccgggttttt ggcggtgacc ctacggcgcc
     1741 actatcaacc catcctggac cccagcttcg acgaattttt gcgcggccat tatcccgatg
     1801 gcatcgtcat
//
LOCUS       DATIRS010000539         1653 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_434562, whole genome shotgun sequence.
ACCESSION   DATIRS010000539 DATIRS010000000
VERSION     DATIRS010000539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_434562"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(167..892)
                     /locus_tag="VLM90_06825"
     CDS             complement(167..892)
                     /locus_tag="VLM90_06825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12712.1"
                     /translation="MAKHFWIGAYKVVAAASMLAMAGCAATASPNYSEILGNAGRLEA
                     ERALDTARKPQEVIAFYGVKKGDKVADLLAGRGYYSVILSQVVGAEGTVYSTNTRERD
                     DWSDRFKQQPFTNVRTVVGPVDKVGLPQDGSLDFALTHLNYHDLPRAVRTAMNKRVLA
                     ALKKGGIYGIVDHSARAGSGDSDSNTLHRIDKQLVIEEVVGAGFKLVEEGTMLSRPDD
                     KRDFNVNKVRNQNDRFVLKFVKP"
     gene            complement(1002..>1653)
                     /locus_tag="VLM90_06830"
     CDS             complement(1002..>1653)
                     /locus_tag="VLM90_06830"
                     /inference="COORDINATES: protein motif:HMM:NF037959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HSQ12713.1"
                     /translation="GPAGQAFKTLADSGFNKPVAIVGLGAGALACYGKPGQDFTFYEI
                     DALVERIARNSKLFTYLKDCPPRTSVQIGDARVTLARAPGQSYGMFILDAFSGDAIPI
                     HLLTQQAVELYLSKLVADGVLLFHISNRYMDLVPVVDRIAAELKLVAFLRHDSEVSEQ
                     ERAEGKQPSTWVIMARQPGLLAPSESDSKWKRLSGDLQGDLWTDNYSNILQVLRWQ"
BASE COUNT          342 a          497 c          457 g          357 t
ORIGIN      
        1 gggcctggcg catgttggag tcgcctgctc gacccgatca cgaaagaaca tttgaaactt
       61 tgacggtcgg tgaccgagat gtaggagtaa ccggtcggtc gccttcacgc caaattgctg
      121 ggtaaaggcg tttttaccgg cggtttgatg attcctttga ctcagcctag ggtttgacaa
      181 acttcagcac aaaacggtca ttttgattgc gcactttgtt gacgttgaaa tcacgcttgt
      241 catcgggacg gctcagcatg gttccttcct caacgagttt aaaaccggcg ccgacaactt
      301 cctcgatcac gagctgcttg tcgatacggt gtaacgtatt cgagtccgag tcaccgctcc
      361 ctgctcgcgc cgaatgatcg acgataccgt agatgccgcc ttttttgagc gccgccaaca
      421 ctcgcttatt cattgccgtc cgaactgctc gtggcaagtc gtgataattc agatgggtca
      481 acgcgaaatc cagtgagccg tcctggggaa gcccgacctt atccaccggc cccacgacag
      541 tcctgacgtt cgtgaaaggc tgttgcttga aacgatccga ccagtcgtcc cgttcgcgcg
      601 tattagtgga atagacggtg ccttccgcgc cgacgacttg cgaaaggatc acggagtaat
      661 agcctcgccc ggccaacaga tcggcgacct tatcgccttt tttgacaccg taaaacgcga
      721 tcacttcttg cggcttgcgc gccgtatcca gcgctctttc ggcctccagc cggccggcgt
      781 taccgagaat ctcgctgtag tttggcgacg ctgtcgccgc gcagccggcc attgcgagca
      841 tcgacgccgc tgccacgacc ttgtacgccc caatccaaaa atgtttcgcc atataagcct
      901 cctggttagt cccgccgcca accgaatgta gattgtctta agctaaatgc aagcccccgg
      961 atacctcgcc ggcgcataaa ccgcatcgcg atcgcccagt gtcactgcca gcgcagcact
     1021 tgcaaaatat tggagtagtt gtccgtccac aggtcacctt ggagatcgcc gctgagccgc
     1081 ttccacttgg aatcgctctc ggacggcgcg agcaggcccg gctgccgcgc catgatcacc
     1141 caagtcgacg gttgcttgcc ctcggctcgc tcttgctcgc tgacttccga atcatggcgc
     1201 aggaaagcta cgagcttgag ctcggccgca atccgatcga caaccggcac gagatccatg
     1261 tagcggttgg aaatgtgaaa tagcaatacg ccgtccgcaa ctaacttgga aagatagagc
     1321 tcgacggctt gctgagtcag caaatggatg ggtatggcgt cgccgctgaa ggcgtcgagg
     1381 ataaacatgc cgtaggactg acccggcgct ctggcgagcg tcacccgcgc gtcgccgatt
     1441 tgcaccgaag tgcgcggcgg acagtctttc aggtacgtga acagtttcga gttgcgcgcg
     1501 atgcgctcga ccaaagcgtc gatttcgtaa aaagtaaaat cctgccccgg cttgccgtag
     1561 caggccagcg cgccggcgcc caggccgacg atggcgaccg gcttgttgaa accgctgtct
     1621 gctaaagtct tgaatgcctg tccggcgggg ccg
//
LOCUS       DATIRS010000540         2412 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1024543, whole genome shotgun sequence.
ACCESSION   DATIRS010000540 DATIRS010000000
VERSION     DATIRS010000540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2412
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1024543"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..715)
                     /locus_tag="VLM90_06835"
     CDS             complement(<1..715)
                     /locus_tag="VLM90_06835"
                     /inference="COORDINATES: protein motif:HMM:NF024762.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase-like domain-containing protein"
                     /protein_id="HSQ12714.1"
                     /translation="MNKYFASLLGESSPKNIASDNRTLVTDPYREFRQAVERPEETID
                     LGRAALAIALADYPDLDISSYLRRIDELAVAVGQRCGAGADRFRSIAALNYVLFSEQG
                     FRGNRDAYYDAENSFLNRVIERKTGIPITLSVLYMEVAQRIGLNFNGVGFPGHFLVKT
                     AIDDNEIVIDPFNAGEIKSPKDLDQMLREMYGGKVGLRAEFLAPVTKKQILLRMLGNL
                     KAIYGRGDEVVKMLAVLDRL"
     gene            complement(826..>2412)
                     /locus_tag="VLM90_06840"
     CDS             complement(826..>2412)
                     /locus_tag="VLM90_06840"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSQ12715.1"
                     /translation="ISVAIAHGYAKAKNKPMIAIVHNMVGLQHASMAIFNAYIDRVPM
                     MVLGGTGPMNTKRRRPRIDWIHTALVQGNQVRDYTKWDDQPYSLADVPDSFIRGYRIA
                     TTDPTAPVYINYDADIQEDAVKAMVDMPDVSRHSTPAPAQANPEALRRAAEMLVNAKN
                     PLIVADMLGRNPKAVPMLIELAELLAAPVVDKGARFNFPAVHPLDVTDGAREILQKAD
                     FILALDVGDLFGALTTVSKQTRESEYLTTPGVRIASISMNDMLVHSWANDFQALQAID
                     VPMCGDTSVAVPELTRLCRELIAKDSAKKATIETRQKELSEKHKSRRAKWLSDAQAKG
                     SQKDISTAWLALEIGEAIKREDWVCVNGTSNGWTRRLWDLSKPNQSLGGSGGAGLGYG
                     PGAAIGAALALKGSGKLAVAIQSDGDMLMTSSAVWTAAKHRIPLLMVMHNNQSYYNSE
                     EHGIEVAKFRKRPVENAPIGTHVDDPAIDFAMMAKSFGVNSEGPVRNPADLRPAIERG
                     VKYVKEKQLPYLVDVIAEPR"
BASE COUNT          470 a          704 c          703 g          535 t
ORIGIN      
        1 tcagacgatc gagcacagcg agcattttga ccacctcatc gccccggcca tagatcgcct
       61 tgagatttcc gagcatgcgt aggagaatct gcttcttggt caccggggcg aggaattcgg
      121 cgcgcaagcc aactttgccg ccgtacattt cccgcaacat ttggtccaga tctttgggtg
      181 atttaatttc gccggcgttg aaggggtcga tgacgatctc gttgtcatcg atggcggtct
      241 tcaccaggaa gtggccggga aaacctacgc cgttgaaatt taggccgatg cgctgcgcca
      301 cctccatata gagaaccgac aaggtgatgg gaatgccggt cttgcgttct atcacccgat
      361 tgagaaaact attttccgca tcgtaatagg catcgcgatt gccgcgaaag ccctgctcgc
      421 tgaacagaac ataattaagc gcggcgatgg aacgaaacct atccgcccca gcaccgcacc
      481 tttgaccgac cgcgacggcc aactcatcga tgcgccggag ataacttgag atgtcgagat
      541 cgggatagtc ggcaagggcg atggccagcg cggcgcggcc aaggtcaatg gtttcttccg
      601 gccgttcgac cgcctgacga aattctcggt aaggatcggt aaccaatgtg cggttgtcgg
      661 aagctatatt cttgggggat gactcgccta gcaagctcgc aaaatattta ttcaccacga
      721 aggcacgaag gacacgaagg tttcagaaaa ttgattttcc gaaattcgtg atcttcgtgt
      781 ccttcgtggt gagtaatctt ttctgcttgt cccaacgcta aattcctagc gcggttcggc
      841 gatgacatcg accaaatacg gcagctgctt ctctttgacg tacttaacgc cgcgctcgat
      901 ggccggccgg agatccgccg ggttgcgcac cgggccttcg ctgttgacgc caaaggattt
      961 cgccatcatg gcgaagtcga tggccgggtc gtcgacatgg gtgccgatcg gcgcgttctc
     1021 caccggccgc ttgcggaact tggcgacttc gatgccgtgc tcttcggaat tatagtagga
     1081 ctggttgttg tgcatgacca tgagcagcgg aatgcggtgc tttgccgcag tccagaccgc
     1141 gctcgaagtc atcagcatgt cgccgtcgga ctgaatcgcc acggcgagct tgccgctgcc
     1201 cttgagtgcc agagctgcgc cgatcgccgc gcctggccca tagcccaagc cggcgccgcc
     1261 gctgccgccg agggattgat tcggcttgct taagtcccat agccggcgcg tccaaccgtt
     1321 cgaagtgccg ttgacgcaaa cccagtcttc gcgcttgatc gcttcgccga tctccagcgc
     1381 caaccacgct gtcgagatgt ctttctgcga gcctttcgcc tgagcgtcgc tcagccactt
     1441 ggcgcggcgg ctcttgtgct tttccgacag ttctttttgg cgcgtttcga tggtcgcttt
     1501 cttggcgctg tctttggcga tcaattcgcg gcacagccgg gtcaattccg gcaccgccac
     1561 cgaggtatcg ccgcacatcg ggacatcgat cgcttgcagc gcctgaaagt cattggccca
     1621 ggagtgcacc aacatatcgt tcatcgagat gctggcgatg cgcacgccgg gcgtggtcaa
     1681 gtactcgctt tcgcgggtct gtttgctcac cgtggtcaag gcgccaaaga gatcgccgac
     1741 gtctagggcc aagataaaat cagccttctg gagaatttcc cgggcgccat cggtcacatc
     1801 caatggatgc accgctggaa agttgaaacg cgcgccctta tcgacgactg gcgcggcgag
     1861 caattcggcc aactcgatca gcatcggcac cgctttggga ttgcgaccga gcatgtcggc
     1921 gacgatcaag ggatttttcg cattgacgag catctccgcc gcgcgccgca gcgcttcagg
     1981 attggcctgc gccggcgccg gcgtggagtg acggctcacg tccggcatgt caaccatggc
     2041 cttaaccgcg tcttcttgaa tatcggcatc gtaattgatg taaaccggcg cggtcggatc
     2101 ggtggtggcg atgcggtagc cgcgaataaa cgaatccggc acatcggcca acgaatacgg
     2161 ttgatcgtcc cacttggtgt aatcgcgcac ctgattgcct tgcaccagcg cggtgtgaat
     2221 ccagtcgatg cgcggccggc gccgcttagt gttcatcggc ccggtgccgc cgagcaccat
     2281 catcggcact cggtcgatgt aggcgttgaa aatcgccatg ctggcgtgct gcaagccgac
     2341 catgttgtgg acgatggcga tcatcggttt gttcttcgcc ttggcgtagc catgagcaat
     2401 ggccaccgag at
//
LOCUS       DATIRS010000541         1907 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1811077, whole genome shotgun sequence.
ACCESSION   DATIRS010000541 DATIRS010000000
VERSION     DATIRS010000541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1907)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1907)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1907
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1811077"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..238)
                     /locus_tag="VLM90_06845"
     CDS             complement(<1..238)
                     /locus_tag="VLM90_06845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12716.1"
                     /translation="MFTLKQFLKALLLPPMPWLLLLLAVLIFWRRRWARKLLFFTLLL
                     ILSLHCGPLNYALRYQLESRYPPLLDPRQAGAYDA"
     gene            complement(346..990)
                     /gene="maiA"
                     /locus_tag="VLM90_06850"
     CDS             complement(346..990)
                     /gene="maiA"
                     /locus_tag="VLM90_06850"
                     /EC_number="5.2.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016034 - maleylacetoacetate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maleylacetoacetate isomerase"
                     /protein_id="HSQ12717.1"
                     /translation="MKLYTFFRSSASYRVRIALNLKAIGCEQAPIHLRRGGGEQLMPA
                     YTAINPQALVPALEDNGRVLTQSLAIIEYLEETHPNPPLLPKDPADRALVRSMALVIA
                     CEVHPIQNLRVLNYVKATYNQTDEQVNQWAQHWIDLGLEALQEMILAQPKRGKFCFGD
                     VPTLADVCLIPQLGNARRYGCDLSKYPTILEIEKNCNAIPAFANAAPEKQPDAD"
     gene            complement(987..>1907)
                     /locus_tag="VLM90_06855"
     CDS             complement(987..>1907)
                     /locus_tag="VLM90_06855"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ12718.1"
                     /translation="VAEGKKDGKVVIYGSMETDIFDGVQQGFEKKTGIKVDYWRAAGA
                     TVLERASSEKRANKVGYDLVLNNAGPMEILLTEGALAKYDSPMAKNFAAEFQHPQLGP
                     SYRTSIVGIVYNKSIISPDKAPKSLEDLLKPEFRGKLAFADPSRGAVAVMWPMSLYKL
                     MGKDRADKYLRDLGATKPVIVEGVLPAAERVTTGETPIAITYLKYVIVFGQKGAPLDY
                     VRQDKMLGHGHAIAMSSRAARPNAAKAFLDYFYSDESLRVMAKSGEFVTRKGIHPPLA
                     DADKIQVVEMDEPDANMMAEKRKEYRKIFQ"
BASE COUNT          356 a          521 c          595 g          435 t
ORIGIN      
        1 tggcgtcgta ggcgccggct tggcgcggat cgagcagcgg cgggtaacgc gactccagtt
       61 ggtagcgcag cgcatagttt aacgggccgc agtggaggct gagtatgagt agcaacgtga
      121 agaataataa tttacgcgcc cagcggcgcc gccaaaagat caaaaccgcc agcagcaata
      181 gcagccacgg catcggcggc agaaggagcg ctttcaagaa ctgcttgagg gtgaacatgg
      241 gtggtggggc agtagccgga agtcagcggt cggaaatcag actcggatgt cgttcgactt
      301 aatctgccaa ctcgcaactc ggcactgata actggctcct acgcatcaat ccgcatccgg
      361 ctgcttttcc ggggcggcgt tggcgaaggc tgggatcgca ttgcaattct tctcaatttc
      421 taaaatcgtc gggtacttcg acagatcgca gccgtaacgc cgcgcgttgc cgagctgcgg
      481 gattaaacaa acgtctgcca gcgtcggcac gtcgccgaag cagaacttgc cgcgcttggg
      541 ctgggcgagg atcatctctt gcagcgcctc caggccgagg tcgatccagt gttgcgccca
      601 ttggttgacc tgttcgtcgg tctgattgta ggtcgctttg acgtaattga gcacgcgcag
      661 attctgaatc ggatgaactt cgcaggcgat caccaacgcc atgctgcgca ccagcgctcg
      721 atctgcgggg tctttgggca gcaacggcgg attgggatgg gtttcttcaa gatattctat
      781 tatcgccagg gactgggtca gaaccctgcc gttgtcctcc agcgccggca ccagggcctg
      841 tggattgatc gccgtgtacg ccggcatcaa ctgctcgccg ccgccgcggc gcaaatgaat
      901 cggcgcctgt tcgcagccga tggctttcaa attcaacgcg atgcgcacgc ggtacgaagc
      961 ggagctgcgg aagaatgtgt aaagtttcat tgaaatattt tcctgtactc tttgcgtttc
     1021 tcggccatca tgttggcgtc gggttcgtcc atctcgacga cttggatttt gtcggcgtcg
     1081 gcgagcggtg ggtgaatgcc tttgcgggtg acgaactcgc cggacttggc catcactctt
     1141 aggctttcgt cactgtagaa gtaatcgaga aacgccttgg cggcgttggg ccttgcggct
     1201 ctgctgctca tggcgatggc gtggccgtgg ccgagcatct tgtcttgtct gacataatcc
     1261 agcggcgcgc ccttttggcc gaagacgatg acgtatttca agtaagtaat cgcgatcggc
     1321 gtctcgccgg tggtgacacg ctcggcggcg ggcaacacgc cttcgacgat caccggtttg
     1381 gtggcgccga gatcgcgcag gtacttgtcg gcgcgatctt ttcccatgag tttgtaaagg
     1441 ctcatgggcc acatgacggc aaccgcgccg cgggacggat cggcaaaggc gagcttgccg
     1501 cggaactcgg gcttcagtaa atcttccaga gacttgggcg ctttgtccgg gctgataatg
     1561 ctcttgttgt agacgatgcc gacgattgac gtgcggtagc tcgggccgag ctgcggatgc
     1621 tgaaactcgg cggcgaagtt tttcgccatc ggcgagtcgt atttcgccag ggcgccttcg
     1681 gttagaagaa tttccatcgg gccggcattg ttgagcacca gatcgtagcc gactttgttg
     1741 gcgcgctttt cactcgatgc gcgttccagc accgtggcgc cggcggcgcg ccagtagtcg
     1801 accttgatgc cggtcttttt ttcgaaacct tgctgaacgc cgtcgaagat gtcggtctcc
     1861 atggagccgt agatgacgac cttgccatct ttcttgcctt cggcgac
//
LOCUS       DATIRS010000542         2640 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1516228, whole genome shotgun sequence.
ACCESSION   DATIRS010000542 DATIRS010000000
VERSION     DATIRS010000542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2640)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2640)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2640
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1516228"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..319
                     /locus_tag="VLM90_06860"
     CDS             <1..319
                     /locus_tag="VLM90_06860"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HSQ12719.1"
                     /translation="DRYDLSADARAVLRANADWLKSNPSVRVEIEGHCDERGTSDYNL
                     ALGAKRAQAAREYLASLGIPVDRLTTTSYGEEIPVCQESTEGCWRQNRRARFVVVERR
                     STS"
     gene            429..1223
                     /gene="ybgF"
                     /locus_tag="VLM90_06865"
     CDS             429..1223
                     /gene="ybgF"
                     /locus_tag="VLM90_06865"
                     /inference="COORDINATES: protein motif:HMM:TIGR02795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system protein YbgF"
                     /protein_id="HSQ12720.1"
                     /translation="MELLERDQRRLRGDVGSIQSSIGTMQSDIDAVRTSLADTRANFQ
                     QMQRDISAIRERIDETRVQVGRQIGQTSRDGDQRVKTLESRLFKLEEDAKAQAEHLKN
                     REAEIQQLKEAAQTAQAAQAAQANAPDGYAEAALGESDGARRDFDSGWRLFERKDFRS
                     AAGRFREFVKKYPKSRIAANAQYWLGECHYGLKEYDKAIVELDEVRRRYPQSEKVPAA
                     LLRQGFAFAELGEKLNARLVLQDVVEKYSQSPEALKAKQKLKSLES"
     gene            1328..2272
                     /locus_tag="VLM90_06870"
     CDS             1328..2272
                     /locus_tag="VLM90_06870"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: protein motif:HMM:NF004159.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HSQ12721.1"
                     /translation="MQIIRHIDDPALAFEGASVTLGNFDGIHLGHQELIKNTVDDARR
                     LGVCSAVLTFEPHPLRVLAPDRAPKMLLTHKDKMQLLQALGVDCVVIQQFDRAFAAIP
                     AQEFVRKYLRERLHAKKVWVGKDLRFGKGRGGDIENLRAWGAQLEYAVGIVEPVMVAG
                     ERVSSSRIRELIGAGAVAAVQPMLARYYFISGKVVPGHRRGRELGFPTANILSRAEIV
                     PRDGIYATLFHLGEKVLPSVTSVGLNPTFGAGPRTVESYILHFDRDIYGESVQVSFVA
                     RLRDELNFASVTALIEQIHVDIADAKKILAVQGFASTT"
     gene            2293..>2640
                     /locus_tag="VLM90_06875"
     CDS             2293..>2640
                     /locus_tag="VLM90_06875"
                     /inference="COORDINATES: protein motif:HMM:NF013633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein"
                     /protein_id="HSQ12722.1"
                     /translation="MGLARFTVGVETAGMRLDVFVARHYAAPATAEAMSRAGVQKLID
                     AGQVTVNGARMKSSVRVKLADRIEIHIPAVREIGLIAEDLPLTILYEDLDIIVIHKAA
                     GMVVHPAAGRTSGT"
BASE COUNT          550 a          721 c          821 g          548 t
ORIGIN      
        1 tgatcgctac gatctcagcg cggatgcgcg cgccgttttg cgcgccaacg ccgattggct
       61 taaaagcaat ccgtcggtgc gggttgagat agaaggccac tgcgatgagc gcggcaccag
      121 cgattacaat ctggcattgg gtgcgaaaag agcccaggcg gcgcgggaat acctggcttc
      181 gttggggata ccggtggatc gattgacgac aaccagctat ggcgaggaaa tcccggtatg
      241 ccaagaaagc acggaaggct gttggcggca aaatcgccgg gcgcgctttg tcgtcgtcga
      301 gcggcgttcc acttcttgat taatggctat tatttataag gatggctcca ttgttcactt
      361 ataaattccc aattctatat gtcttgaccg ctttggtggt tacgtccggc tgtgtgaatc
      421 cgcaacaggt ggagctgcta gaacgcgacc aacggcggct gcgtggcgat gtcggttcga
      481 tacagtcgag tatcggtacg atgcagtccg atatcgacgc ggtgcgcaca agtttggccg
      541 atacccgggc caattttcag cagatgcaac gcgatatcag cgcgattcgc gagcgcatcg
      601 atgaaacccg agtgcaagtc ggacggcaaa tcggccaaac cagccgggat ggcgatcagc
      661 gggttaagac cttagagtcg cgtttgttca aacttgaaga agacgccaaa gcccaagctg
      721 agcatttgaa aaaccgcgaa gccgagatcc agcaactgaa ggaggcggcg caaacggcgc
      781 aagctgctca agccgctcaa gcgaacgcac cggatggcta tgccgaagcg gcgcttggcg
      841 agtccgacgg ggcgcggcga gattttgaca gcggctggcg tctcttcgaa cgcaaggatt
      901 ttcgctcggc ggccggccgg tttcgcgagt tcgtgaaaaa atatcccaag agccggatcg
      961 cggcgaacgc gcaatattgg ctcggtgaat gccactacgg tctcaaagaa tacgacaagg
     1021 cgatcgttga gttggacgaa gtgcggcgcc gttacccgca atcggagaaa gtcccggcgg
     1081 cgctgctgcg gcagggcttc gcctttgccg agctcggtga aaaattaaac gcccgtttgg
     1141 tgctgcaaga tgtcgtcgaa aagtattccc aatctccgga agcgctcaag gccaagcaaa
     1201 aactcaaatc cctcgagtcc tagccccttg tcatccgcat agcgcaacga agtgccgcgg
     1261 ccatgcgcgc ctgcttgggg caccggtgtg actcccagag tggttcggtg ttattgtacg
     1321 gtataccatg cagataattc gtcacatcga cgatcccgcg ctcgccttcg agggcgccag
     1381 cgtgactttg ggcaacttcg atggcattca cttgggccat caggagctca tcaagaatac
     1441 ggttgacgat gccaggcggc tgggagtgtg ctccgcggtg ttaactttcg agcctcatcc
     1501 actgcgcgtg ctcgctcccg accgggcgcc taagatgctg cttacccata aggacaagat
     1561 gcagctgctg caagcgctcg gtgtcgattg cgtggtgatt caacagttcg atcgcgcctt
     1621 tgccgccatt cccgcgcagg agttcgtgcg caagtatttg cgcgagcgac tgcacgccaa
     1681 gaaggtttgg gtcggcaagg acctacgctt tggcaaggga cgcggcggcg atatcgagaa
     1741 cttgcgcgcc tggggtgcgc aattggagta cgcagtgggc attgtcgagc cggtcatggt
     1801 agctggagag cgcgtcagta gctcgcggat tcgcgaactc atcggcgccg gcgcagtcgc
     1861 cgcggtgcag ccgatgttgg cgcgatacta tttcatttcc ggcaaggtcg tgcccggtca
     1921 ccggcgcggc cgtgagctcg gctttccgac ggccaacatc ctcagccggg ccgagatcgt
     1981 cccgcgcgac ggtatctatg cgaccttgtt ccacctcggc gagaaggttc tgcccagcgt
     2041 taccagcgtc gggcttaacc ctaccttcgg cgccggcccg cgcaccgtcg agagctatat
     2101 attacatttt gatcgggaca tttacggcga gtcggtgcag gtatcgttcg tcgcccggct
     2161 ccgtgacgaa ttgaacttcg cttcggtgac agcgttgatc gagcagatcc atgtcgatat
     2221 cgctgacgcc aagaaaatcc tcgcagttca gggctttgcg tcgacgacgt aggctgacgc
     2281 aaaatcttaa gcatgggatt ggcacgattc acggttgggg tcgagacggc gggcatgcgc
     2341 ttggatgtgt tcgtcgcgcg ccactatgcc gcgccggcaa cggccgaggc aatgagccgt
     2401 gccggggtac agaagcttat cgatgccggt caggtgaccg tcaacggggc gcgcatgaag
     2461 tccagtgtcc gggtgaaatt ggccgatcgt atcgaaattc acatcccggc cgtgcgtgag
     2521 atcggtttga tcgctgagga tttgcctttg acgattctct atgaagatct agatattatt
     2581 gtaattcaca aagccgctgg catggtcgtt caccccgcgg cggggcgtac gagtggcaca
//
LOCUS       DATIRS010000543         1697 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_828104, whole genome shotgun sequence.
ACCESSION   DATIRS010000543 DATIRS010000000
VERSION     DATIRS010000543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1697)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1697)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1697
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_828104"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(108..575)
                     /locus_tag="VLM90_06880"
     CDS             complement(108..575)
                     /locus_tag="VLM90_06880"
                     /inference="COORDINATES: protein motif:HMM:NF013052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SET domain-containing protein-lysine
                     N-methyltransferase"
                     /protein_id="HSQ12723.1"
                     /translation="MAKTVKKKPRRYAVRTSPIHGRGVFALTRIAKSTRVIEYKGELI
                     SDAEADRRYSKKHANSPHTMLFSVDGGLVIDATRRGNSARWINHCCQPNCEIADQGHR
                     IFIEARREIRPGEELTYDYNLQIGERHTKAAKREHACFCGARRCRGTMLGEEE"
     gene            complement(603..>1697)
                     /locus_tag="VLM90_06885"
     CDS             complement(603..>1697)
                     /locus_tag="VLM90_06885"
                     /inference="COORDINATES: protein motif:HMM:NF015214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HSQ12724.1"
                     /translation="WTHVIEKTNKQWAENARAYYRYVSQNDLCLTHALTDQYYDRTKR
                     VSEQEDPDLILHVVGETKEGPVLRGLRTLATLAPVSDEVLVYPNRPRDPDEPDYAIAF
                     AIPMNTPGLKILCRDLYAENADPERYPLTTRFDEVDAALIFDDVVVPWERLFVYRDAK
                     LLSGIPYIHTWGQYSTMLRLVTKLEAFLGVAQLLTQYAKRQTSASSQLLLSSLMQDIE
                     ILRSCIRVGELRGYMSPGGTWAPLLSPAYRVHSIEASDRAERTMEGLLTSTLMLSGGA
                     SDLANDEIGPFVERYFRGGAPNTKEHLRLMAVDADMVMSPFGKRSQLYERLQSGEPDR
                     MRQRLFAQYKDSAPAERMLRFVKGFDDDRR"
BASE COUNT          328 a          503 c          494 g          372 t
ORIGIN      
        1 cgttccaacc ccagcaaagt ggcggatagt tgcagcattt tgggtgacga tcggatcgat
       61 tggatgagca gtatcaaaac tttttctgct atgccgggcc agattattta ctcttcttca
      121 cccagcatcg ttccgcggca gcgccgcgcg ccgcaaaagc aggcgtgctc gcgcttcgcc
      181 gccttggtgt gacgctcgcc gatctgcagg ttatagtcgt aagtaagttc ttcccccggg
      241 cgaatttcgc gtcgcgcttc gataaatatc cggtgcccct ggtcggcgat ctcgcagttg
      301 ggctggcagc aatgattgat ccagcgcgcc gagttgccgc gccgggtggc gtcgatcacc
      361 aaaccgccgt ccacggagaa aagcatggtg tgcggtgagt tcgcgtgttt cttgctatag
      421 cgccggtccg cttccgcgtc ggagatcagc tcgcccttgt actcgatcac ccgagtgctt
      481 ttagcgatgc gcgtcagcgc gaacacgccg cgcccatgga tcggtgaggt gcgcacggca
      541 taacgccgcg gttttttctt gactgttttt gccattgact ctccatgtgc aatctgaaat
      601 cgctatctgc ggtcgtcgtc gaaccccttg acgaatctga gcatgcgctc ggccggcgcg
      661 gaatctttgt actgggcaaa gagccgctgg cgcatgcggt cgggctcgcc gctctgcagc
      721 cgttcgtaga gttggctgcg tttgccgaac gggctcatca ccatgtcggc atctactgcc
      781 atcaggcgca aatgttcctt ggtgttcggc gcgccgccgc gaaaatagcg ctcgacgaaa
      841 ggaccgatct cgtcgttggc aagatcagac gcgccgccgc tcaacatgag cgtgctcgtc
      901 aacaaacctt ccatggtgcg ctcggcgcga tccgaagctt cgatactatg gacgcgatag
      961 gcgggactca agagcggcgc ccaggtgccg cccgggctca tgtagccgcg cagttcaccg
     1021 acccggatgc acgagcgcag tatctcgatg tcttgcatca acgacgacag cagcagttgc
     1081 gatgaagcgc tggtttgccg tttggcgtac tgggttaaca actgggccac gcccaagaag
     1141 gcttccaatt tcgtgaccaa acgcaacatc gtcgagtact ggccccaggt atgaatgtag
     1201 ggaatgccgc tgagcagctt cgcatctcta tacacaaaaa gccgctccca cggcaccacc
     1261 acatcgtcga agatcagcgc agcgtcgact tcgtcgaagc gcgtcgtcag cggataacgt
     1321 tcgggatcgg cgttctcggc ataaagatcg cggcagagaa ttttcagacc cggtgtgttc
     1381 atgggaatcg cgaacgcgat ggcataatcc ggttcgtcgg gatcgcgcgg ccgatttggg
     1441 taaaccaaca cttcgtccga cacgggcgcc aaagtcgcca aggtgcgcaa cccgcgcagc
     1501 accggtcctt ccttggtttc gccgacgacg tgcagaatca aatcgggatc ttcctgctcg
     1561 ctgacgcgct tggtccggtc atagtactga tcggtcaagg cgtgcgtcag acagagatcg
     1621 ttttgactca cgtaacgata ataggcgcgc gcgttttccg cccactgctt gttggtcttc
     1681 tcgatcacat gggtcca
//
LOCUS       DATIRS010000544         1567 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1811321, whole genome shotgun sequence.
ACCESSION   DATIRS010000544 DATIRS010000000
VERSION     DATIRS010000544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1567
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1811321"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1243
                     /locus_tag="VLM90_06890"
     CDS             <1..1243
                     /locus_tag="VLM90_06890"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: protein motif:HMM:NF001221.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HSQ12725.1"
                     /translation="QALRLGKQAKIAARLLAPLSSAEKNRALLLMAEKLEAESGYLVE
                     ENQKDLEFATANAVSSAILDRIALNPSRVRAMAQGLREVAALPDPVREVVKMWRRPNG
                     LQVGRMRIPLGVIGMIYEARPNVTADAAALCLKSGNAVILRGGSEAHHSNQAIGAVLR
                     EACAETKVPQDAVQVVQVRDRALVNELLQLEEYIDLIIPRGGEDLIRAVVAHSKIPVI
                     KHYKGICHVYVDSDADLQMAEKICFNAKVQRPSVCNAMETLLVHEAVASKFLPAMIEK
                     YRSAKVEVRGCAKSCALVPGVTPAAEADWSTEYLDLIVSVRIVKSMDEAIGHIEQYGS
                     EHTESIITTSYQKSREFIDRVNSSAVMVNASTRFNDGGELGLGAEIGISTSKIHAFGP
                     MGLEELTTTKFIVFGDGQIRE"
BASE COUNT          319 a          450 c          493 g          305 t
ORIGIN      
        1 acaagcactt cgcctgggca agcaagccaa gatcgccgcg cgcctgttgg cgccgttgtc
       61 ttcggcggaa aaaaaccgcg cgcttttgct gatggccgag aagctcgaag cagagagcgg
      121 ctatttggtc gaagaaaacc agaaagatct tgaatttgcc acggccaacg ccgtgtcgag
      181 cgccatcctc gaccgtatcg cgcttaaccc gagccgggtg cgggcgatgg ctcagggtct
      241 gcgcgaggtc gcggcgctcc ccgatccggt gcgcgaagtg gtcaagatgt ggcgccgtcc
      301 aaacgggttg caggtggggc gcatgcggat tccgctgggc gtcatcggca tgatctacga
      361 agcccgcccc aacgtcaccg cagatgctgc ggcgctctgt ctcaagtccg gcaatgcggt
      421 gattctgcgc ggcggcagcg aggcgcatca ttccaatcaa gccatcggcg cggtgctgcg
      481 cgaagcctgc gccgaaacaa aagtgcccca ggacgccgtt caagtggtgc aggtgaggga
      541 tcgcgcgctg gtcaacgagt tgctgcaatt ggaagagtat atcgatttga tcattccgcg
      601 cggcggcgag gatttgatcc gtgccgtggt ggctcattcg aagatcccgg tgatcaagca
      661 ctacaaaggc atctgccatg tctatgtcga cagcgatgcc gatttgcaga tggcggagaa
      721 gatttgcttc aacgccaagg tgcagcggcc ttcggtgtgt aacgccatgg aaactctgtt
      781 agttcacgaa gcagtggcgt cgaagttctt gccggcgatg atcgagaagt atcgctccgc
      841 caaggtcgag gtccgcggct gcgccaaatc ctgcgctttg gtgccgggcg tcacgcccgc
      901 cgccgaggca gactggtcga cggaatatct cgatctgatc gtatcggtgc gcattgtcaa
      961 aagcatggac gaggccatcg gccatatcga gcagtacggc tcggaacata ccgagagcat
     1021 catcacgacc agctaccaga agtcgcggga gtttatcgat cgggtcaatt catcggccgt
     1081 gatggtcaat gcctcgacgc gcttcaatga tggcggtgag ttgggccttg gcgcagagat
     1141 cggcatcagc acgagcaaga ttcacgcctt tggtccgatg gggctggaag aactgacgac
     1201 gaccaagttt atcgtctttg gcgatgggca gattcgcgaa tgaaatcgcc ccgccaggaa
     1261 aatgccccgc cgccgctgag tttcgagttt cgagttccga gtcccgagtt gacccgaaac
     1321 gcgaaactcg gaacccgaaa cgtttataga ttcctcctgg ctaatatcac tcgcgtgagc
     1381 caccaccctc gtcagacccc gaaaggttgt tctctcgtct gatgaagatc ggcttgttcg
     1441 gcggcacgtt caaccccgtg cacctcgggc acctgcgctc ggctctggag gtgcgggagg
     1501 ggctcggcct caacgaagtg gtcctggtcc cggccgcggt gccgccgcac aagggccacg
     1561 cggagct
//
LOCUS       DATIRS010000545         3271 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_631460, whole genome shotgun sequence.
ACCESSION   DATIRS010000545 DATIRS010000000
VERSION     DATIRS010000545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3271
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_631460"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..367)
                     /locus_tag="VLM90_06895"
     CDS             complement(<1..367)
                     /locus_tag="VLM90_06895"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSQ12726.1"
                     /translation="MADAEKKKGGIWSRRDFFTRLGWGGFGIFGGLSLLGFLRSAFPR
                     VLFQPPATFKAGFPSDYALGEVSEKYKQDQRVWIVREETGVYAIFAKCTHLGCTPRWL
                     AAESKFKCPCHGSGFYKSGL"
     gene            complement(370..720)
                     /locus_tag="VLM90_06900"
     CDS             complement(370..720)
                     /locus_tag="VLM90_06900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12727.1"
                     /translation="MTSDTPNLAPEAREQEIERLAQELGRLIQGADPERRHDLKELAI
                     ALMREEFIHKVEPAPGAGATPAPFNPLGAGVLLFFLGGGLSFIFGPVGLLLMLGGVTF
                     VVWGALISWLKKAK"
     gene            complement(788..1270)
                     /gene="ispF"
                     /locus_tag="VLM90_06905"
     CDS             complement(788..1270)
                     /gene="ispF"
                     /locus_tag="VLM90_06905"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HSQ12728.1"
                     /translation="MAKQFRIGHGFDVHRFRHGRKLILGGVEIPSPVGLLGHSDADVV
                     LHALINALLGAMGEGDIGSHFPDTDRRYKGIASAKLLAEVLAIMRRKRFKIVNVDVTL
                     VAQRPKLSPHYPAMRKSVAGLLKLAISEVSIKAATTEKLGWLGKGQGMAGTAVILLGR
                     "
     gene            1482..2222
                     /locus_tag="VLM90_06910"
     CDS             1482..2222
                     /locus_tag="VLM90_06910"
                     /inference="COORDINATES: protein motif:HMM:NF023984.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3750 domain-containing protein"
                     /protein_id="HSQ12729.1"
                     /translation="MLIICLLIFVALPLYTVLSGQAPQGRDFRTADRSSAGIAPRAES
                     TPEAVVQVYFARALNWRGIFGVHTWIATKPANATEYTVHQVIGWRIYRDLPAAFSAPG
                     IPDARWFGYAPTLIADLRGDAAAKAIPKITEAVANYPYANEYTLWPGPNSNTFVAFIG
                     RAVPELRMDLPATAIGKDYPINGSMIDRAPSGTGYQLSFLGVLGVTMAREEGFELNLL
                     GFTFGIDFYKPALKLPFIGRLGMGENCT"
     gene            2254..>3271
                     /locus_tag="VLM90_06915"
     CDS             2254..>3271
                     /locus_tag="VLM90_06915"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 87 protein"
                     /protein_id="HSQ12730.1"
                     /translation="MPDRTTASTPYRAVVFLATAFTLAVCIFLIDNNLYSQPEQFHES
                     DFIMTFHVAGRLVSEGRASELYPDPSAKTFVNSRFDKAAHEYLPTLPKDSTGAYMYIP
                     LVAGFFAPFGWLNPNLSLLLWQAISALALLWCCRELAALTGAKTGEMFFLAFLFLPIF
                     LTLWAGQLGLTFGLLPLCLGFSLLVKNRPLLAGVIWSILLLKPQYFLAAAFVSLVLLV
                     SGRYWTFIGMSSGVIGLLVVTLLGFGPNLTQQWLLSHQVSDAMYSSGQQGIPSHLITG
                     LPANLMILFPVAQRAALKWPLYFGAAMLWVVGFCYAIKIAKGRLDNLSGLAVALTIGI
                     CLSAI"
BASE COUNT          684 a         1024 c          842 g          721 t
ORIGIN      
        1 tcaagcccga cttataaaag ccgctgccat gacagggaca tttgaattta ctctccgcgg
       61 cgagccagcg cggcgtgcag ccaagatgcg tgcacttggc aaaaatcgca taaacgccgg
      121 tctcttcgcg aacgatccaa acccgctggt cttgtttata cttctcgctc acttcgccaa
      181 gggcataatc agatggaaag ccggctttaa acgttgccgg cggttgaaac agcacccggg
      241 gaaacgccga gcggagaaac ccgagcaggc tcaacccgcc aaatatgcca aacccgcccc
      301 agcccaaacg cgtgaaaaaa tcccgccgtg accaaatgcc gccctttttc ttttccgcat
      361 ctgccataac tatttcgctt tcttaagcca gctgatcaac gcgccccaaa ctacaaaagt
      421 tacgccgcct agcatcagca gcaggccgac cgggccgaat atgaacgaca aaccgccacc
      481 caaaaagaac aacaggactc cggctcccag tggattgaaa ggcgccggtg tcgcccccgc
      541 acccggtgcc ggttcaacct tgtggatgaa ctcctcgcgc atcagcgcga tggccaactc
      601 cttgagatca tggcgccgct cagggtcggc gccctgaatc agacggccaa gctcttgagc
      661 caacctttcg atctcttgtt cgcgcgcttc cggcgcaaga ttgggagtat cagatgtcac
      721 ctgagattag gattgttgat tattatagaa aatattcttt gtcaacaatt tggcccctct
      781 taaagcgcta acgcccgagc aaaatcaccg cagtacccgc cattccctgc cctttgccaa
      841 gccaaccgag cttctcggtg gtggcggcct tgatgctaac ctcgcttatg gcgagtttga
      901 gcaggccggc aacgctcttg cgcatggcgg gatagtgcgg cgacaacttg ggccgctgcg
      961 ccaccaaagt cacatcgaca ttgacgatct taaaacgctt gcgccgcatg atcgccagca
     1021 cctcggcaag tagcttggcg ctggcaatcc ccttgtaacg gcgatcggta tcggggaaat
     1081 ggctgccaat atccccttcg cccatggcgc ccaacaaagc attgatcagc gcgtgcaaaa
     1141 ccacatcggc gtcggaatgg ccgagtaaac cgaccggcga cggaatctca acgccgccaa
     1201 ggatcaattt ccggccatgg cgaaagcggt gcacgtcgaa accatgaccg atacgaaact
     1261 gttttgccat cgcttttcag tcagtgccgg tatcatcgcc cgaaccgctg cgacattcaa
     1321 ccgaattgct ggtcgaagta agattgccgg ccggaatctc gttatttccg gccaacggaa
     1381 atatcaatcg caccggcacc ctacgacgaa ataacggtta tggtgttcac agcttctatc
     1441 cgctatactt cgcgccaagt tcaagaacca tgcgaccgca tatgctgatc atctgcttgc
     1501 tgatctttgt cgccctgccg ctttataccg tgctctccgg tcaagcgccg cagggacgtg
     1561 actttcgcac cgcggaccgc tccagcgctg gcatcgcgcc gcgcgctgag tcgaccccgg
     1621 aagcggtggt gcaagtctat ttcgcccggg cgctcaattg gcgcggtatt ttcggcgtcc
     1681 acacctggat cgccaccaaa ccggcaaacg ccacagagta taccgtgcat caggtcatcg
     1741 gctggcggat ttatcgcgat ctacccgcgg cgttctcagc gccgggcatc ccggacgccc
     1801 gttggttcgg ttacgctccg accttgatcg ccgacctgcg cggcgacgcc gccgccaaag
     1861 cgataccgaa gattaccgag gcagtcgcca actatcctta tgccaacgaa tacacacttt
     1921 ggcccggacc caatagcaat accttcgtcg ctttcatcgg ccgcgcggtg cctgaactgc
     1981 gcatggatct gcccgccacc gccatcggca aagactaccc gatcaacggc tcgatgatcg
     2041 atcgcgcccc aagcggcaca ggctaccagc tttcctttct tggcgtcctc ggcgtgacca
     2101 tggcccgcga agaaggattt gaactgaatc ttctaggatt caccttcggc atcgatttct
     2161 ataagccagc cctcaaactg cctttcattg gccgcctcgg catgggagaa aactgtacct
     2221 gagctttcag caggaaatca ttaaacgctc aggatgccag accggaccac cgcctcgaca
     2281 ccataccgcg cggtcgtttt tctggcgacg gcgttcaccc tggcggtctg catctttctc
     2341 atcgacaaca acctatactc tcagcccgaa cagtttcacg agtcggactt catcatgacc
     2401 tttcatgttg ccggccgtct ggtgagcgag gggcgggcga gcgaacttta tcccgatccc
     2461 agcgccaaga ctttcgtcaa ctcacggttc gacaaagccg cccatgagta tctgcccacg
     2521 ctgcccaaag actccaccgg cgcctacatg tacattccgc tggtcgccgg ttttttcgcc
     2581 cccttcggct ggttaaatcc caacctttcg ttgctgctgt ggcaagcgat ttcagcgctg
     2641 gcgctgctct ggtgctgccg cgaactcgca gcgctcacag gggcgaagac cggtgaaatg
     2701 ttttttttgg ccttcctatt cctgccgatc tttctcaccc tgtgggccgg tcaattgggg
     2761 ctgacgtttg gcttgctacc actgtgcctg ggtttcagcc tgttggtgaa aaatcggccg
     2821 ctgctcgcgg gtgtgatttg gtcgatcctg ctgctcaagc cgcaatactt tctcgccgcg
     2881 gcgttcgtct cgctggtact gctagtaagc gggcgctatt ggacgttcat cggcatgagc
     2941 tccggggtca tcgggctttt ggtcgtcacc ttgttaggat tcggcccgaa cctgacccag
     3001 caatggctgt tgagccacca ggttagcgac gccatgtatt cgagcggcca gcaaggtatt
     3061 ccgagccatc tcatcaccgg cttaccagcc aacttgatga ttttattccc ggtggcgcaa
     3121 cgggcggcgt tgaaatggcc gctctatttc ggcgccgcca tgctctgggt cgtgggattt
     3181 tgctacgcta taaaaattgc caagggacga ttggataatt tatccggttt ggccgtcgcc
     3241 ctgaccatcg gcatttgctt gtcggcgatt a
//
LOCUS       DATIRS010000546         1858 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_729956, whole genome shotgun sequence.
ACCESSION   DATIRS010000546 DATIRS010000000
VERSION     DATIRS010000546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1858
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_729956"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1770)
                     /gene="pnp"
                     /locus_tag="VLM90_06920"
     CDS             complement(<1..1770)
                     /gene="pnp"
                     /locus_tag="VLM90_06920"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: protein motif:HMM:NF008805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HSQ12731.1"
                     /translation="MIKKVEMDFHGRPLSIEIGRLAKQADGAALVQYGETVLLVTAVA
                     AKELKMDMDFFPLTVDYQEKAFAAGKIPGGFFKREGRPSEKEILTCRIIDRSIRPLFA
                     DGLRCETQIIATVLSADKENDPDVIAMLGTSVALHISDIPFNGPLAGIRIGRIDGRYV
                     MNPTQTQLADSDMDIFMAGSKDAIVMVEGGAQIVPEEEILEALFAGHDAIQPLLQLQD
                     ELRQALGKPKRLVPLAELNHAVSKRVEDLAMAKLQQALEIPEKLERYKRIAEVKSEVV
                     PAALAEFPDKQKDIKGSFEELKKNVFRGLVIHKERRIDGRGLRDIRPITCEVQALPRT
                     HGSAIFTRGETQALVVTTLGTASDEQRVDALIGEHFKKFMLHYNFPPFSVGEVKFLRG
                     PGRREIGHGNLAERALLPVLPVDEGFPYTIRIVSEILESNGSTSMASVCGGSLSMMDA
                     GVPLKAPVAGIAMGLIKEGEHVRVLSDILGDEDHLGDMDFKVAGTAEGVTSLQMDIKI
                     SGVNREIMGQALHQAKEGRMHILGIMNQTLSTGRTDVSGHAPRIVTIHVKPDKIREII
                     SPGGKVIRGIIEATGVKMDVEDDG"
BASE COUNT          398 a          543 c          513 g          404 t
ORIGIN      
        1 tccgtcgtct tcgacatcca tcttgacgcc ggtggcttcg atgatgccgc ggatgacttt
       61 gccgccggga ctgatgattt cacgaatctt atccggcttg acgtgaatcg tcacgatgcg
      121 tggcgcgtgg ccggacacgt cagtccgccc cgttgacagc gtctggttca tgatgccgag
      181 gatatgcatg cggccttctt tagcctgatg taaggcctga cccatgatct cacggttgac
      241 gccgctgatc tttatatcca tctgcaatga ggtcacgccc tcggccgtgc cggcgacttt
      301 aaaatccata tcgcccaggt gatcctcatc gccaagaatg tcggaaagaa cccgcacatg
      361 ctcgccttct ttaatcaagc ccatggcgat gcccgccacc ggcgctttca aagggacacc
      421 ggcatccatc atcgacaacg aaccgccaca cacgctcgcc attgaggtcg aaccgttgga
      481 ttcaagaatt tctgaaacga tgcgaatggt ataaggaaaa ccttcgtcaa ccggaagcac
      541 cggaagcagc gcccgctcgg cgagattgcc atggccgatc tcgcgccggc cggggccgcg
      601 caggaacttc acttcaccga cgctaaacgg cgggaagttg taatggagca tgaatttttt
      661 gaaatgctcg ccgatcaaag cgtcgacccg ctgctcgtcg gaagcggtgc cgagggtggt
      721 gacgactaag gcttgtgtct caccgcgagt gaagattgcc gagccgtggg tacgcggcag
      781 cgcttgcact tcacaggtga tcggccggat gtccctcaag ccgcggccat cgatacgccg
      841 ctccttgtga atcaccagac cgcggaaaac atttttctta agctcttcga aagagccttt
      901 gatatctttt tgtttatcgg gaaattcggc caatgccgcc ggcacgactt cgctcttcac
      961 ttcggcgatg cgcttgtagc gctcgagctt ttcgggaatt tctagcgcct gttgtagctt
     1021 ggccatggcc aggtcttcga cccgcttgct cacggcatgg ttcagctcgg ccaacggcac
     1081 caagcgcttg ggcttaccga gcgcctggcg aagctcgtct tggagttgca gcaaaggctg
     1141 aatcgcgtca tggccggcga acagcgcttc gagaatttct tcttccggaa cgatctgggc
     1201 gccgccctca accatgacga tggcgtcctt gctgccggcc atgaaaatat ccatgtcgct
     1261 gtcagccaat tgggtttgcg tcgggttcat cacatagcgg ccatcgatgc ggccgatgcg
     1321 tatgccggcg agcgggccgt taaacggaat atccgagata tgcagcgcca ccgaagtgcc
     1381 caacatggcg atcacatcgg gatcgttttc cttgtcggcg gacaataccg tcgcaataat
     1441 ttgcgtctca cagcgcagcc cgtcggcaaa cagcggccgg atcgaacgat cgatgatccg
     1501 gcaggtcaag atctcttttt ccgaaggacg gccttcacgc ttgaagaaac cgccgggaat
     1561 cttgccggcc gcgaaggcct tctcctggta gtcaacggtc agcggaaaaa aatccatgtc
     1621 catcttaagc tctttagccg ccacagcggt gaccaacaaa acagtctcgc catactgcac
     1681 cagtgccgcg ccatcggcct gcttggccaa acggccgatt tcgatggaca agggtcgccc
     1741 atgaaaatcc atttcgactt tcttaatcat agaaaaatcc tctgaaggga gatggatgta
     1801 acggaggagt gggaacggcg ggcgaccggc tagaagctac ttgcgtattc caaggcgc
//
LOCUS       DATIRS010000547         2570 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_336537, whole genome shotgun sequence.
ACCESSION   DATIRS010000547 DATIRS010000000
VERSION     DATIRS010000547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2570
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_336537"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1927
                     /locus_tag="VLM90_06925"
     CDS             <1..1927
                     /locus_tag="VLM90_06925"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TIR domain-containing protein"
                     /protein_id="HSQ12732.1"
                     /translation="GALVGHLTKHIGDPDDKRRATYGYVYACPIGAVVKMLDVTPQTV
                     TVAAPKLATLAESIPGIEAQAYHVFVSYRSTDRPWAMSLVSRLEGAGLRVFIDQRELL
                     PGDYLAAQLESALNRSRAAVVLVSKGWLESPWCQQEANVLVKRAIEDKTFKLVPLRLD
                     DSAMPEFLDTRVWLDFNRKPQAEGENLDRLLSALIGRTPPQVNSPTARADAADVRVID
                     QFVAEIKSAAKGDGKRIFEIVNEWRATGSPDVAPLIAAAEALSGKGQFESALEVLEGA
                     QATLRVRQLRAFALRKMGQVDEAIAQLEALCREGQLDPETGGLLAGSYKARWLKSGDM
                     AFRQLAYQVYRETYERSGDPFNGINVAAMALHCGDEASMYQVAGQVRDRLMKADNSKL
                     THWDLATMGEAYLLLKRFDDARDWYGRAAGKAAGLHQDIAVMRRQARLNLQALGQPRD
                     KLDDVLPVPRVLAYFGHMVDADDRPTPRFPASKVGDLRKIIRSRIEKYGALHGFGQAA
                     RGTDLIVLEELVRRDLTATVVLPIPQEDFLTLSVGDQWKDRFAKLSQDKKRIAFASPL
                     KSQRPPDAELAIALADANREVQRLAIEFSRRLDETPIVLAVWDGKEGDGPGGTADAIT
                     LWRDEGFDIDVIDIAKL"
     gene            complement(2074..2412)
                     /locus_tag="VLM90_06930"
     CDS             complement(2074..2412)
                     /locus_tag="VLM90_06930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12733.1"
                     /translation="MADKRQPEMFDQLMQSARAFQAVTSDTEARMKKIRLLLEALVND
                     PNMCRHSKTWLCTESRNNLLLYEDPKCGFVVNAVVRTPEREGRVRDHAHAWTVYGVLD
                     GIERLERLRV"
BASE COUNT          527 a          747 c          799 g          497 t
ORIGIN      
        1 tggcgctctg gtcggacatc tcaccaagca tatcggcgac ccggatgaca agcgccgcgc
       61 cacctacggc tacgtctatg cgtgcccgat cggcgcggtg gtaaaaatgc tcgatgtcac
      121 gccgcagaca gtaacggtag cagcaccgaa acttgcaacc ctcgccgagt cgatacccgg
      181 catcgaggcg caggcctatc atgtgttcgt cagctatcgc tcaaccgatc ggccgtgggc
      241 aatgagtctt gtgtcgcgcc tggagggtgc cggtttgcgg gtcttcatcg accaacggga
      301 gctgcttccc ggcgactacc tggcggcgca gcttgaatcg gcgctaaacc gtagccgcgc
      361 agcggtggtg ctggtgagca agggttggct cgaatctccg tggtgccagc aggaggccaa
      421 tgtgctggtt aagcgggcga tcgaagacaa gacgttcaaa ctcgtgccgc tgcggctcga
      481 cgacagcgcg atgcccgagt ttctcgacac gcgtgtctgg ctcgacttca accgcaaacc
      541 ccaggcggag ggagaaaact tagatcgctt gttgagcgcg ctgatcgggc gcacgccgcc
      601 ccaagtgaat tctccgactg cgcgcgcgga tgcggccgat gtccgggtca tcgaccagtt
      661 cgtcgctgag atcaagtcgg ctgcgaaagg cgatggcaaa cggatcttcg aaatcgttaa
      721 tgagtggcgc gcgaccggat caccggacgt ggctcctttg attgcagcgg cggaagcgct
      781 tagtggtaaa ggccaatttg aatcggcatt ggaggtactc gaaggggcgc aggcgacgtt
      841 gcgcgtgcgc cagcttcgcg ccttcgcact gcgcaaaatg ggccaggtcg acgaagcgat
      901 tgcgcagctc gaagcgctgt gccgcgaggg ccagctcgat ccggaaaccg gcggcttact
      961 cgcgggaagc tataaagcgc gttggctgaa atcgggtgac atggcgtttc ggcaattggc
     1021 gtatcaagtc taccgcgaaa cctatgagcg ctctggcgac ccgttcaacg gtatcaatgt
     1081 ggcagcgatg gccttgcatt gtggcgatga ggcatcgatg tatcaggtcg ccgggcaggt
     1141 acgcgaccga ctaatgaaag ctgataactc aaagctgacg cattgggatc tggcgaccat
     1201 gggcgaggcg tatttattgc tgaagcgctt cgacgacgcg cgcgattggt acggcagggc
     1261 cgccggcaaa gccgccggtc tgcatcagga cattgccgtg atgcgcagac aggcgcgcct
     1321 gaatctccag gcgctcggcc aaccgcggga caagctcgat gacgtgctgc cggtaccacg
     1381 cgtgctcgcc tacttcgggc acatggtgga tgccgatgac cgcccgacgc cgcgcttccc
     1441 ggcgagcaag gtcggcgacc tgcgcaaaat catccgcagc cggatcgaga aatacggcgc
     1501 gttacatggt ttcggccagg cggcacgcgg aaccgacctg atcgtgctcg aggagttggt
     1561 gcgacgcgac ctgacggcga ctgttgtgtt gccgattccc caggaggatt ttttgactct
     1621 gtcggtgggc gatcaatgga aggaccgctt tgccaagttg tcgcaggaca agaagcggat
     1681 cgcgttcgcg tctccgctca aatcgcagcg tccgccagac gctgaattag ccatcgcgct
     1741 cgccgacgcc aaccgtgagg tgcaacggct cgcgatcgaa ttctcccgcc gtctggatga
     1801 aacgcccatc gtcctggcgg tctgggacgg caaggaaggc gacggccccg gtggaaccgc
     1861 cgatgcgatc acgctctggc gcgatgaggg attcgacatc gatgtaatcg acatcgccaa
     1921 gctctgaagc ctcgcggggc actttccgta cgctgtgtgc aaactggaca aacatcactc
     1981 gagagcatcg ccaaccgcac gatcatcggc atctcccata caaggtaggt gacgagcggc
     2041 ttgtggataa ccataaacgc ccagcgcgca taatcagacg cgaagacgct ctaacctttc
     2101 tatgccgtca agcacgccat agacggtcca ggcgtgcgcg tggtcgcgca ctcttccctc
     2161 gcgctccggc gtgcgcacca ccgcgttgac gacaaaaccg cacttgggat cttcgtagag
     2221 caagagatta ttgcgacttt cggtgcatag ccaagttttg gaatgccggc acatgtttgg
     2281 atcgttgacc aaggcttcca gaagaagtct gatttttttc attcgcgctt cggtatccga
     2341 agtgaccgct tgaaatgcgc gagcggattg catcaactgg tcgaacatct ccggctgccg
     2401 cttgtcagcc atgattgatc ctccccatga aatgtgattt ttgttttgtt gatcgcaagg
     2461 gcgacccgcg cctgtcctga acgatgtcga agggtggtcg ccgtccgaga gggcagagac
     2521 atcggtctgc cccgccggcg acgcttagta aaacccaaat tgaaccaacc
//
LOCUS       DATIRS010000548         2455 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_926380, whole genome shotgun sequence.
ACCESSION   DATIRS010000548 DATIRS010000000
VERSION     DATIRS010000548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2455)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2455)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2455
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_926380"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1436)
                     /gene="glmS"
                     /locus_tag="VLM90_06935"
     CDS             complement(<1..1436)
                     /gene="glmS"
                     /locus_tag="VLM90_06935"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: protein motif:HMM:NF001484.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HSQ12734.1"
                     /translation="MCGIVGYIGQRDAAPLILESLRKLEYRGYDSAGIAVLHDSRVSV
                     RRAEGKLNNLAATLERQPMTGTIGIGHTRWATHGRPSENNAHPHSAGDIVVVHNGIIE
                     NYLELKQQLIKRGTHFTSETDSEIVAHLVAEKVARGVDFLVAVQRTLREIQGSYALLF
                     LNRRDPTRMIVAKNSTPIVIGAGDGEMFIASDIPALLDYTRKVAFLEDGEIGEVTVAG
                     FRLFDGKGKRVKRPVKQITWDAIAAQKGGYPHFMLKEIHDQPRALADTFRGRIALKDG
                     NVALEDIKLNASAVKQIKRIHLVACGTAWHACLVGKFLLEEIAGIPAEVDYGSEFRYR
                     SPLMDPKSILLMVSQSGETADTLAATDIARAKKAKILSICNVIDSSIPRKSHGVLYTH
                     AGPEISVASTKAFTTQLTALYLLAIALGRMNGKLKSADARKLLRDLMHLPTWIEEALK
                     LEPEVRVLARDLLHSRDFLYLGRGINYP"
     gene            complement(1436..>2455)
                     /gene="glmU"
                     /locus_tag="VLM90_06940"
     CDS             complement(1436..>2455)
                     /gene="glmU"
                     /locus_tag="VLM90_06940"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: protein motif:HMM:TIGR01173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003977 - UDP-N-acetylglucosamine
                     diphosphorylase activity [Evidence IEA];
                     GO_function: GO:0019134 - glucosamine-1-phosphate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HSQ12735.1"
                     /translation="AVTLLTAVLDRPLGYGRVVRDASGRVTGIVEEKDASEGQRQIGE
                     VNAGVYVASSAFLFAALGAVKNDNRQGEYYLPDIVAIGLAQGKTIETVQAADAREMMG
                     VNTKEDLAFMEKSLRESINRQWMLAGVTLKDPDTTYIDEGVTIGKDTVIGPNTQLRGK
                     TIIGERCQIDGTAFLTDVEIADDVQLKFSVMLTACRVGGGAIVGPFAQLRPGTELGRN
                     VHIGNFVEAKAAHIGDGTKANHLTYLGDVTIGQDSNIGAGTITCNYDGFQKYQTKIGD
                     RVQVGSDTTLVAPITLGDDVYIATASTVRKNVPAGALVYNQREEKIRAGWTEQKRQQM
                     KGKSK"
BASE COUNT          502 a          710 c          705 g          538 t
ORIGIN      
        1 atgggataat tgatgccgcg gccgagatag agaaagtcac ggctgtggag cagatcgcgg
       61 gccaacactc tgacttccgg ttcgagcttc aaggcttctt cgatccaggt cggcagatgc
      121 atcagatcgc gcagcaactt acgcgcgtcg gctgatttga gcttgccgtt catccggcca
      181 agcgcgatgg cgagcaagta gagcgcggtc aattgggtgg taaacgcttt ggtgctggcg
      241 acactgatct ccgggccggc atgggtgtaa aggacaccat gggatttgcg tgggatagat
      301 gaatcgatga cattgcagat cgacagaatt ttcgctttct tggcgcgagc aatatcggtg
      361 gccgccaagg tatccgcggt ttcgccggac tggctcacca tcagcaagat cgatttaggg
      421 tccatcaacg gcgagcgata gcgaaactcc gaaccgtaat ccacctcggc gggaatgccg
      481 gcgatctctt caagcaaaaa cttgccgacc agacaggcat gccaagcggt gccgcaagcg
      541 actaagtgta tccgtttgat ctgtttcacc gcgctggcgt tgagcttgat atcttccagc
      601 gccacattgc cgtctttgag tgcgatgcgg ccgcgaaagg tatcggccaa agcgcgcggc
      661 tggtcatgga tctccttgag catgaaatgc gggtagccgc ctttttgcgc cgcgatggca
      721 tcccaggtga tctgtttcac cggccgctta acccgcttcc ccttgccgtc aaataggcga
      781 aagccggcga cggtcacttc accgatctcg ccgtcttcga gaaacgccac tttacgagtg
      841 tagtcgagca acgcgggaat atcggaagcg ataaacatct cgccatcgcc cgcgccgatc
      901 acgatgggcg tggaattttt ggcgacgatc atgcgcgtcg gatcgcgccg gttgagaaac
      961 aacaacgcat aagaaccttg aatttcccgc agcgtgcgct gcaccgcgac gagaaaatcg
     1021 acgccgcggg caaccttctc ggcaaccagg tgggcgacga tctcggaatc ggtttccgag
     1081 gtaaaatgag tgccgcgctt gatcaattgc tgcttcaact cgagataatt ctcgatgatg
     1141 ccgttgtgca caaccacgat atcgccggcg ctatgcgggt gggcattgtt ctccgacggc
     1201 cggccatggg ttgcccaacg ggtgtggccg atgccgatcg ttccagtcat cggctggcgt
     1261 tccaaagtcg cggcgagatt gttgagtttg ccctcagccc ggcgcacgga cacccggctg
     1321 tcatggagca cggcgatgcc cgccgagtca taaccgcggt attcgagctt acgtaagctt
     1381 tcgagaatca gaggtgctgc gtccctttgc ccaatgtagc cgacgatgcc gcacattatt
     1441 tggattttcc tttcatctgc tggcgcttct gctcggtcca gcccgcgcgg attttttctt
     1501 cgcgctggtt gtagaccagc gcaccggccg gaacgttctt gcgcaccgta ctggcggtgg
     1561 cgatatagac atcgtcgccg agcgtgatcg gcgccaccag cgtggtatcg ctgccgacct
     1621 gaacgcggtc gccgatcttg gtttggtact tttgaaaacc gtcgtagtta caggtgatcg
     1681 tacccgcgcc gatgttggag tcctggccga tggtgacgtc gcctaaataa gtcaaatggt
     1741 tcgccttggt gccgtcgccg atatgcgccg ccttggcctc gacgaaattg ccgatatgaa
     1801 cattgcgacc gagctcagtg cccggacgca gttgcgcgaa cggaccgacg atcgcgccgc
     1861 cgccgacccg gcaagcggtg agcatgacgg agaacttaag ctgcacgtcg tcagcgatct
     1921 caacgtcggt aagaaaggcc gtgccgtcaa tctggcaacg ctcaccgata atcgttttgc
     1981 cgcgcaattg agtgttggga ccgatcacgg tgtctttgcc gatggtcaca ccctcgtcaa
     2041 tatacgtcgt atcgggatct tttaacgtca cgccagcgag catccactgg cgatttatgc
     2101 tctcacgcag gctcttttcc ataaaagcga gatcctcttt ggtgttgacg cccatcatct
     2161 cgcgagcgtc ggccgcttgc acggtttcga tggttttccc ctgagccaat ccgatggcga
     2221 caatatccgg cagataatat tcaccctgcc gattgtcgtt tttaactgcg cccagggcag
     2281 caaatagaaa cgccgacgac gcgacataga cgccggcatt cacttcgcca atctgccttt
     2341 gcccttcgct ggcgtctttc tcttcaacaa taccggtgac acggccggaa gcgtcgcgca
     2401 caacacggcc ataacccagg ggccggtcga gcacagccgt aagcaatgtc acggc
//
LOCUS       DATIRS010000549         3653 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_532620, whole genome shotgun sequence.
ACCESSION   DATIRS010000549 DATIRS010000000
VERSION     DATIRS010000549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3653
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_532620"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            56..472
                     /locus_tag="VLM90_06945"
     CDS             56..472
                     /locus_tag="VLM90_06945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12736.1"
                     /translation="MISLSFHAKLQRFERRPGASLYRSSLYWYGIYLLIPDAEWLPYM
                     MNHLEIGYVRQRKRWPAAALLRENQIYVACQTNDDLPYILDHLGDDHLVLGTDYGDND
                     TSSELNAMRKLKVDGKISGTSIDKILGSNAQALYSL"
     gene            complement(657..3011)
                     /locus_tag="VLM90_06950"
     CDS             complement(657..3011)
                     /locus_tag="VLM90_06950"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HSQ12737.1"
                     /translation="MAENPPPAGRLRRLYHRLPADIRAALDPSLSMPARLLHGAKGLA
                     LLGGLGLALMLVYGVILLPFTPSIADLRRAKIDQPSVLISADGRRLATLKPMNREWVR
                     LNQISPHVITALIATEDHRFYNHYGVDLLRMASGILRTLIGDPQGGSTLTQQLARNLY
                     PEGIGRQRTVTRKLKETITAIKIEFAYSKHEILETYLNTMPFLYNAFGIEMAARTYFD
                     KPAQKLTLIESATLIAMLKGTAYYNPVLNPERSLKRRNVVLGQMVKRGVLSEAEFNRQ
                     KLRPIRLDFERQPEALGPIPHLAMQIRKWLIDWADRNDKNIYTDGLIVHTTIDSRLQA
                     LANQAVNRQMESLQAVADVEWGMSSKQLLSTEVNTYVQQRRRVQPFGYFWKTQSALFD
                     SFIRESPAYRRALEAGTKPEAALAKLKTDKEFLGKLRAEKSRLQAGFVAIDPASGHVK
                     AWVGSRDFRTDQFDHVVQARRQPGSTFKPFVYGAAIEQGMSPDKRFVDRAVEISLPGG
                     KVWRPADATAPTGRSMTAREGLIFSKNTITAQVMQEIGPIKTAQLARLMGITQSKLEE
                     VPALALGTSPVTLLEMVSAYSTLAAGGQYRPPIFVSRITDKNGNELVSFASETQRVLS
                     DKSAGELINILRDAIDQGTGQPVRAQFGVRADVAGKTGTTQDNTDGWFILMHARLVAG
                     SWVGFNDSRITMRSDYWGQGAHNALLLVGDFFQHTLDSQFVAAASRFPYERPYQSVWD
                     PVIDTAKDWLGGILKDWGFGDRSTPAPAPQRRERSERDLDSTRD"
     gene            complement(3186..>3653)
                     /locus_tag="VLM90_06955"
     CDS             complement(3186..>3653)
                     /locus_tag="VLM90_06955"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSQ12738.1"
                     /translation="GRCLSLLAMSAPPGAFLELGSSGGYSSLWLSLAARARGVTLTTV
                     DLNEKKVALARENISRAGAAGTVEVCHGDAFDFATRFDHIAFCFSDIEPPELNAKIYE
                     LIVPRRVPGGWIVVDNVTSPRYQKELLEHAHSDPRVDCVLLPFPKGDLICRKC"
BASE COUNT          733 a         1012 c         1107 g          801 t
ORIGIN      
        1 aattcgcagc gctgtgatga aatcgcattt taccgcatgg taggattcgt cgatcatgat
       61 ttcgttgtcc tttcacgcca agttgcagcg tttcgagcgg cggccaggcg catccctgta
      121 ccgttcctct ctgtattggt atggaatcta tctattgatc ccagacgccg agtggttgcc
      181 ttacatgatg aatcatttgg agatcggcta cgtccggcaa aggaaacgct ggccggcggc
      241 ggcgctgtta cgcgagaatc aaatctatgt ggcgtgccag accaatgacg atttgcccta
      301 tatcctcgac catttgggcg atgaccatct ggtcctggga acggactacg gcgacaacga
      361 tacgtcgtct gaactcaacg ccatgcgcaa actgaaagtc gatggaaaaa tttccggaac
      421 ctccattgac aagatcttgg ggagtaatgc ccaagcgctg tatagtctat gattattgct
      481 ttgcgatgtc gttagcgttg cgccagcctc tcggtgatca ggggagtcag aagcgccagc
      541 agctgcgaac taggcccggt cgcacgaatg gctgtggttc gataatttat ccagataatc
      601 tgtaaatccg tccgatcaat ccgctctgac tcatgacgcc ggcgcgtacc ggcgactcaa
      661 tctcgcgtcg agtcgaggtc tcgctcactg cgctcacggc gctgcggcgc cggtgccggt
      721 gtagatctat cgccgaatcc ccaatcttta aggatgccac ccaaccaatc tttcgcggtg
      781 tcgatgactg gatcccagac agattggtac ggcctttcat aggggaagcg ggaggcggcg
      841 gcgacgaatt ggctgtcgag cgtgtgctga aagaaatcgc ccaccagcag caaggcgtta
      901 tgcgcgccct ggccccagta gtcgctgcgc atggtgatgc gcgagtcgtt gaagcccacc
      961 catgagccgg cgacgagccg cgcatgcatc aagatgaacc agccgtcggt gttatcttgc
     1021 gtggtgccgg tcttcccggc aacgtcggcg cgcacgccga actgggcgcg caccggttgc
     1081 ccggtgccct ggtcgatggc gtcgcgcaat atgttgatta gttcgccggc actcttgtcg
     1141 gaaagaacgc gctgggtttc gctggcaaag ctgaccaact cgttgccgtt cttatcggtg
     1201 atgcggctga caaaaatcgg cggtcgatat tggccgccgg cggccaaggt gctgtaagcg
     1261 gaaaccattt ccagcagagt aaccgggctg gtgccgagcg ccaacgccgg gacctcctcg
     1321 agcttactct gggtaatccc catcaatcgc gccagttggg cggtttttat cgggccgatt
     1381 tcctgcatga cctgggcggt gatggtgttc ttcgagaaga tcagaccttc gcgcgcggtc
     1441 atcgatcggc cggtcggcgc cgtggcatcg gcagggcgcc acaccttgcc gccgggcaga
     1501 gagatctcca ccgcgcggtc gacgaagcgc ttatcgggcg acattccctg ctcgatggcg
     1561 gcgccgtaaa cgaacggttt gaaggtcgag cccggttgcc gtctggcttg cacgacatga
     1621 tcgaattgat cggtcctgaa gtcacggctg ccgacccacg ccttgacgtg accgctggcc
     1681 ggatcgatgg cgacgaaacc cgcctgtaaa cggcttttct cggcgcgcag cttgccgagg
     1741 aattccttgt cggttttcaa cttggccaat gcagcttcag gcttcgtccc ggcctccagc
     1801 gcgcggcgat aagccgggct ttcgcggata aaggaatcga acaaggccga ttgggttttc
     1861 caaaaataac cgaacggctg cacgcgccgc ctctgctgga cgtaagtgtt gacttccgtc
     1921 gataacaatt gcttcgaact catgccccac tcaacgtcgg cgaccgcttg caaggactcc
     1981 atctggcgat ttaccgcttg gttggcaagc gcctgcaaac gcgagtcgat ggtggtgtgg
     2041 acgatcaagc cgtcggtata aatattcttg tcgttgcggt ccgcccaatc gatcaaccat
     2101 ttgcgaatct gcatggcaag atgcgggatg gggccgaggg cttccggctg gcgttcgaaa
     2161 tcgagccgta tggggcggag tttttgccgg ttgaattcgg cctcgctcaa cacgccgcgc
     2221 ttgaccattt gccccaacac gacgttacgg cgcttgagcg agcgttcggg attgagcacc
     2281 gggttgtaat aggcggtgcc ttttaacatg gcgatcagcg tcgcgctttc gataagtgtc
     2341 agtttctgcg ccggcttgtc gaaataggtg cgcgcggcca tttcgatgcc gaaggcgttg
     2401 tacaaaaaag gcatggtatt gagataggtt tcgaggattt catgtttgct ataggcgaac
     2461 tcgatcttga tcgcggtgat ggtctctttt aattttcttg tgacggtgcg ttggcggcca
     2521 attccctcgg gatacaaatt gcgcgcgagt tgctgggtga gcgtggagcc gccctgcgga
     2581 tcaccgatca atgtgcgcag gattccgctt gccatgcgca gcaaatcgac gccgtaatgg
     2641 ttgtagaagc ggtggtcttc ggtggcgatc agggccgtga tcacatgggg cgagatttga
     2701 tttaatcgga cccactcgcg gttcattggc ttaagcgtcg cgaggcgccg gccatcggcg
     2761 gaaatcagca cgctgggttg gtcgatcttg gctcgtcgta gatcggcgat gctcggcgtg
     2821 aacgggagca aaatgacgcc gtaaaccaac atgagcgcca gtccaagacc gcccaatagc
     2881 gccagtccct tggccccatg cagcagtctg gccggcatgc tcaagctagg atcgagggcg
     2941 gcgcggatgt cggccggcag ccgatggtac aagcgtctta gtcgtccggc agggggcggg
     3001 ttttcagcca cgattattct cttatttctg agccatcgcg tcgcagttcc agcgcggcaa
     3061 tctgcttaga cgaatgggcg gtgacataag ttaatgtcac tgccacctat tctatgtgat
     3121 ggaaataaga actaaagggg cgagtaagtg cgacaatggc ttatttgggc tcaccgagcc
     3181 tctggtcagc acttgcggca gatcaaatcc cctttgggaa atggcaggag gacgcagtct
     3241 acgcgcggat cgctgtgcgc gtgttccagg agctcctttt ggtagcgcgg cgaagttacg
     3301 ttatcgacga cgatccaacc gccgggcacc cggcgcggaa caattaactc gtagatcttg
     3361 gcgttcaact cagggggctc gatgtcggaa aagcaaaacg cgatatggtc gaaacgggtg
     3421 gcaaagtcga aagcgtcgcc atgacagact tcgaccgtac cggccgcgcc ggcgcggctg
     3481 atattctctc tcgccaaggc gacctttttt tcatttagat cgaccgtcgt gagcgtcaca
     3541 ccgcgcgcgc gcgctgccaa tgacagccac agactagagt agccaccgct gctgccgagc
     3601 tcgagaaatg cgcccggcgg cgccgacatc gccagcagcg ataggcagcg gcc
//
LOCUS       DATIRS010000550         1564 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1811602, whole genome shotgun sequence.
ACCESSION   DATIRS010000550 DATIRS010000000
VERSION     DATIRS010000550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1811602"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            70..959
                     /locus_tag="VLM90_06960"
                     /pseudo
     CDS             70..959
                     /locus_tag="VLM90_06960"
                     /inference="COORDINATES: protein motif:HMM:NF014476.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            1054..>1564
                     /locus_tag="VLM90_06965"
     CDS             1054..>1564
                     /locus_tag="VLM90_06965"
                     /inference="COORDINATES: protein motif:HMM:NF014476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12739.1"
                     /translation="MPLFLNNDEVSQLITMKDTMEALEILYGEMGQGAAVTAPRSDVH
                     SPTAAAANAEGPMAHYLKSMSGASPHFGTAALRFSSDIVAWRDTAGGMRREKLPMLPG
                     QRWMGVILLFSSANGELLAVMNDGVLQRFRVGGANGVSTKYLARANAETVGLIGSGWQ
                     AGTQVLAVCE"
BASE COUNT          326 a          430 c          502 g          306 t
ORIGIN      
        1 gacccggaga aaatatatca gtggggcacc atggaaggcg gctcagtgtc cggttacttc
       61 gccatccgca tgaaatctga cgtgatctac gagcaggagt atcagggcgc ggtcacccag
      121 gaaaaatact gcgtgcggcc gggtaacttt tgcggcttga ttctcttgaa tagcatcgag
      181 aacggcgagc cgttggcgct gatcaatgac ggctatctgc agcatatgcg ggtcggcgcc
      241 gattccggca tcggcgccaa atacatggcg cgggaagacg ccagcgtggt tgcatgatcg
      301 gctccggcgg catggcgcgc tcccatgtcg agtcgtttct gcaggcgcgc aaaattaaaa
      361 agattcaggt ctatagtccg accaaggcga accgcgaatc ttacgccaag gagatcggcg
      421 ccgcgtacgg tctcgaagtc gtgccgatga gccatccgcg cgacgtttac aaaggcgcgc
      481 atatcgtcgc cggttgcagc gactccgccg tgcccatcgt catcggtaaa tggctggaag
      541 agggcaccca tgttacctgc gtcggcggca cacccgacga agacactttg aagcgcatcg
      601 atgtctcgct gcgattgggc acggcaccgg cgccttgggg gctgccggaa ttcgctctcg
      661 ccgatgagta cattacctat gcggccaagc ccaaagacaa tgccggcttt caaatgaagc
      721 gtgccggcaa gcgcggtcat ggcgtcatcg ccgaagatcg cgcggtgttt ttttcggaga
      781 tacttggcgg cgcgaaaaca gggcgcagtt ccgacaagca ggtgacgtac tcggagcgcg
      841 gcaatattca gggcgcgcaa ttttttgccg tggcggggaa ggtctacgaa cttgccaaag
      901 agcgcggtct cggacgcgag ctgccgacgg agtggttctt acaggatatc agggattaaa
      961 aacgtgatcg tgctcgtcgc tcgtgttcga tagggatttt agtttcggtc aacgagcacg
     1021 atcgggagcc acgaccacga agccgaggta tgcatgccat tatttctcaa caacgacgaa
     1081 gtcagtcaat tgatcaccat gaaggacacg atggaggcat tggagattct ctatggtgaa
     1141 atggggcagg gtgcggcggt caccgcgccc cgttcggatg ttcatagtcc gaccgccgcg
     1201 gcggcgaacg ccgaggggcc gatggcgcac tatttaaaaa gcatgagcgg cgccagtccg
     1261 cactttggca ccgcggcact gcgcttttcc tccgacatcg tcgcctggcg cgataccgcc
     1321 ggcggcatgc gccgggaaaa gctaccgatg ctgccggggc agcgctggat gggagtcatt
     1381 ttgcttttca gttcggccaa cggtgagttg ctggcagtga tgaacgacgg cgtcttgcaa
     1441 cgtttccgcg tcggcggggc caacggtgtg tcgaccaaat acctggcgcg ggccaatgcc
     1501 gaaaccgtcg gcctgatcgg ttccggctgg caggccggca cccaggtgtt agccgtatgc
     1561 gagg
//
LOCUS       DATIRS010000551         1915 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1221756, whole genome shotgun sequence.
ACCESSION   DATIRS010000551 DATIRS010000000
VERSION     DATIRS010000551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1915)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1915)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1915
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1221756"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..427
                     /locus_tag="VLM90_06970"
     CDS             <1..427
                     /locus_tag="VLM90_06970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12740.1"
                     /translation="STINAFFSREPFITWRKKNFVRVLYQTGSKRDARLKDVPLFSEL
                     MDKYKTAESVRRLAKVVLAADEFGRPIVFPPGVPADRVKIIRDAFNKTINDPALLAEA
                     EKRRLDIDPATGEELDSLAKEVMTATPEIVERVKKMIGM"
     gene            517..1512
                     /locus_tag="VLM90_06975"
     CDS             517..1512
                     /locus_tag="VLM90_06975"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ12741.1"
                     /translation="MNVEPAAAQAPPFYQGKTIRIVIGSSTGGGYDLWARVLARYYGK
                     YIPGNPTILVQNMPGAASIVATNYLYNIAKPDGLTLGALLPAIYFDQLVGRKEVQFDF
                     AKIPWIGSPEQNTILHYMRADSPYKSIEDIRKAKEPPRCGSSGTGTTGFYIPRLLDEV
                     LGTKHTVVAGYPGGSEIDLAVERGEVHCWSPLVATYFGREPYISWQKKGFVRVIVQFG
                     AKRERRLADVPTIYELMDQFKTPDAGKRLTRVILVAATLGRPIAVTPGIPPDRLNLLR
                     DAYQKTLKDPELIAETKRQRWDIDPLTGEEMEKLSKEVMTQPKEVIERMKWVLGN"
     gene            1697..>1915
                     /locus_tag="VLM90_06980"
     CDS             1697..>1915
                     /locus_tag="VLM90_06980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12742.1"
                     /translation="MTRDFLDSFKRSKVLALLIFSVIELLNPLNLERVFAQANFYQGK
                     TITMVVASTASGGYDLWARLTARYLGKHI"
BASE COUNT          444 a          559 c          521 g          391 t
ORIGIN      
        1 atctacgatc aacgcctttt tctcgcgcga gccgtttatc acctggcgca agaaaaattt
       61 tgtgcgcgtg ctctaccaga ccggcagcaa gcgcgatgcg cggctcaagg acgtgccgct
      121 gttcagtgaa ttgatggaca aatacaagac ggctgaaagc gtccggcggc tagccaaagt
      181 ggtgctggcg gccgatgaat tcggccgtcc gatcgtcttc cctccaggcg tccctgccga
      241 ccgggtgaag atcattcgcg acgccttcaa caagacaatc aacgaccctg ctcttttggc
      301 ggaggcggaa aagcggcggc tcgacattga tccggcaacc ggcgaagaac tcgactcctt
      361 ggccaaagaa gtcatgaccg cgacgccgga aatcgtcgag cgggtgaaaa aaatgatcgg
      421 catgtagggg gagaaatgcc gttcaaaggt tcaaaagttc aaaggttcaa ggttctcgga
      481 tttttaatct tcaccgtcgt tgcactgttg caccttttga acgttgaacc agcggcggcg
      541 caggcgccgc ctttctatca aggcaagacg attcgcatcg tcatcggttc ctccaccggc
      601 ggcggttacg atctgtgggc gcgcgtttta gcgcgctact acggcaaata catcccgggt
      661 aatccaacaa ttctcgtgca aaacatgccc ggcgcggcgt cgatcgtcgc gaccaattat
      721 ttatacaaca tcgccaaacc cgatggtctg accctgggcg cgctgctgcc ggcgatttat
      781 ttcgatcagc ttgtcgggcg caaagaagtg cagttcgatt tcgccaagat tccctggatc
      841 ggctcgccgg aacaaaacac gatcctgcac tacatgcgcg ccgattcgcc ctacaagtcg
      901 atcgaagaca tccgcaaagc caaggagccg ccgcgttgcg gcagctccgg caccgggacg
      961 actggatttt atattccccg cttactcgac gaagtcctag gcacgaaaca cactgtcgtc
     1021 gccggctatc ctggcggttc cgaaatcgat ctcgcggtcg aacgcggcga agtccactgc
     1081 tggtcgccgc tggtagcgac ctactttggc cgcgagccct acattagctg gcagaagaag
     1141 ggcttcgttc gagtgatcgt gcagttcggc gccaagcgcg agcggcgcct ggccgacgtg
     1201 ccaaccattt acgagttgat ggatcaattc aaaactcccg acgccggcaa gcgcctgaca
     1261 cgcgtgatcc tggttgccgc gaccctcggt cggcccatcg cagtcacgcc gggaattccg
     1321 cccgaccgct tgaacctgct gcgcgacgcc tatcaaaaga cgttaaaaga ccccgaactc
     1381 atcgccgaga ccaaacgcca acgctgggac atcgacccgc tcaccggcga ggagatggaa
     1441 aaactttcaa aagaagtcat gacccagccg aaggaagtca tcgaaagaat gaaatgggtc
     1501 ctgggaaact agtcaccagg ctgccagtga catcaaaaat gagaaagtcc gtcacaccgg
     1561 cgaaggccgg tgtccatctc tggtttcagc agaaccgcga aaagaccgcc gccgcacctg
     1621 gattccggcc tgcgccggaa tgacggaata ggaaattgtt gttttactct gatttgcgct
     1681 aagtgcgagg acctttatga cccgtgattt tctagactcg ttcaaacgct caaaggttct
     1741 cgcactcctg attttctccg tcattgaact tttgaaccct ttgaacctgg aacgagtatt
     1801 cgcgcaggcg aatttttatc aaggtaaaac catcaccatg gtcgtcgcct cgaccgcgag
     1861 cggcggttac gatctgtggg cgcggctgac ggcgcgttac ctcggcaagc atatt
//
LOCUS       DATIRS010000552         2696 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1123921, whole genome shotgun sequence.
ACCESSION   DATIRS010000552 DATIRS010000000
VERSION     DATIRS010000552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2696)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2696)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2696
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1123921"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2020)
                     /locus_tag="VLM90_06985"
     CDS             complement(<1..2020)
                     /locus_tag="VLM90_06985"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSQ12743.1"
                     /translation="MSQFPAPQLSALRVVGQSVTRVDAHSKITGAAEFSGDRLSVENL
                     LYGKTLRSPHAHAQIVAIDTAKAEALPGIRAVITYRDVPAIPFEAGDDSGSDGVVEAV
                     FLLNRTLRHVGDEVAAIAADSEEIAEEALGLIQVDYRPLPFVLNEERALEADAPSVRG
                     GANLAGKEAIEFSRGDVDLGMREAAQIFEQTYRTQSTSPLALEPRYAVASWQGDRLTV
                     WKASRNVYGDRDKLAKTFSLPPDRVRVVATYLGGGFGSKDETRLGLITALLARQADQP
                     VRMGYSREEELGYGKWRHATTTHIRMGIKADGTIAAIDTTSALNTGPYAPGYGVASRL
                     GHGLTYLYSCANARFIGKVAYTNSPVAGSYRGLGAPQAHFALESFADEVAESLRIDPL
                     EFRLRHCVRPEGQPGERVTAIDSLVPSQPIEGGVPFSSNLLAQCLKEGAKRIGWQARP
                     NGPRKRLVNGKYRGMGLAACIYKTGQSQSSARVKLSANGSAELLMSITEIGQGAWTIL
                     SQIVAETLGMDMAKVHATFADTDTTPFAHSTSGSTTTFTSGLAAQQAAEDAKRQLLES
                     AARLLEVAPAKLLWRDEFVVIADTPEIKIPVGHVIRRQPEQTIVGEAKLRAGSKTHII
                     NSFAAHFAAVEVDAYTGGVRVLNYVAVHDSGRIIHPEAARGQIIGGVVQ"
     gene            2194..>2696
                     /locus_tag="VLM90_06990"
     CDS             2194..>2696
                     /locus_tag="VLM90_06990"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HSQ12744.1"
                     /translation="MNRTQIIIVRHGQTEWNIRGIRQGYLDSPLTDRGLAQAKALGQR
                     LAREKFTALYSSDLGRAMQTAREIANVTGHGILTDARLRERHLGIFQGLSGEEIVAKH
                     PEERRAMRSQGPGYVIPGGESMVQQVERNMACLNDLAARHVGEQIVVVTHGGVVSGFF
                     RHTLEISL"
BASE COUNT          481 a          757 c          903 g          555 t
ORIGIN      
        1 cttggacgac gccgccgatg atctggccgc gcgccgcttc gggatggatg atcctgccgg
       61 agtcatgcac ggcgacgtag ttgagcacgc gcacgccgcc ggtgtaggca tcgacttcga
      121 ccgcggcgaa gtgggcggcg aaggaattga tgatgtgggt cttgctgccg gcgcgcagtt
      181 tggcctcgcc gacgatggtc tgttcaggct ggcgccggat gacgtgaccg acgggaattt
      241 ttatttccgg cgtgtcggcg atcacgacaa attcatcgcg ccacagcaat tttgccggcg
      301 ccacttcgag caatctcgcc gcgctttcga gtagctggcg cttcgcgtct tcggcggctt
      361 gctgcgcggc cagtcccgac gtgaacgtcg tcgtgctgcc ggaagtgctg tgcgcgaatg
      421 gcgtggtgtc ggtgtcggca aaggtcgcgt gaacttttgc catatccata ccgagagttt
      481 cggcgacgat ctgactgagt atcgtccatg cgccctggcc gatctcggtg atgctcatca
      541 aaagttcggc gctgccgttg gctgatagtt tgaccctggc cgacgattgg gattgcccgg
      601 ttttgtaaat gcacgcggcc aaacccatgc cgcggtactt gccgttgact agccgtttgc
      661 gcggaccgtt ggggcgcgcc tgccaaccga ttcgcttcgc gccttctttg agacattgcg
      721 ccaagagatt gctggaaaag ggcacgccgc cttcgatcgg ttgtgatgga actaaactgt
      781 cgattgccgt cacacgctct cccggttggc cttcggggcg cacgcaatgg cgcaagcgga
      841 actctagcgg gtcgatgcgt aaactttccg cgacttcgtc ggcgaaggat tccagggcga
      901 aatgggcctg cggcgcgccg agaccgcgat aggagccggc cacgggacta ttggtgtagg
      961 cgactttgcc gatgaagcgc gcgttggcgc agctgtagag ataagtgagc ccgtggccca
     1021 gccgggaagc gacgccgtag cccggcgcgt aggggccggt gttgagcgcg ctggtggtgt
     1081 cgatggcggc gatcgtgccg tccgctttga ttcccatgcg aatatgcgtc gtggtggcgt
     1141 ggcgccattt gccataaccg agttcttcct cgcggctgta gcccatgcgc acgggctggt
     1201 cggcctggcg cgcgagcagc gcggtgatga gtcctaatcg ggtttcatct ttgctgccga
     1261 agccgccgcc aagataggtg gcgacgacac ggacgcggtc cggcggcagt gagaatgtct
     1321 tggcgagctt gtcgcgatcg ccgtagacgt tgcgactggc cttccatacc gtgagccgat
     1381 cgccttgcca ggacgccacg gcgtagcgcg gctccagcgc caggggactg gtggattgcg
     1441 tgcgataggt ttgctcgaaa atctgcgcgg cttcccgcat gccgaggtcg acatcgccgc
     1501 gcgagaattc aatcgcttct ttgccggcca ggttagcgcc gccacgcacc gacggcgcat
     1561 cggcttcgag ggcgcgctct tcattcaaga cgaagggcag gggacgatag tcgacttgaa
     1621 tcaagcccag cgcttcttcg gcgatctctt cgctgtcggc ggcgatggcc gcgacttcgt
     1681 cgccgacgtg ccgcaaggtt cgattgagta aaaaaaccgc ctccaccact ccgtcagacc
     1741 ctgaatcatc accggcttcg aacgggattg ccggcacatc gcgataagtg atcaccgcac
     1801 gtatgccggg taacgcctcg gctttcgcgg tgtcgatggc gacgatctgc gcatgagcat
     1861 ggggactgcg cagggtttta ccgtacagca gattctcgac cgacaggcgg tcgccggaaa
     1921 actcggcggc gccggtgatc ttgctatggg cgtcgacgcg agtgaccgac tggccgacga
     1981 ctcggagagc ggacagttgg ggagcaggga attgcgacat ggggtatcgg agcgcgcgaa
     2041 atttgctctt tggatagcag agcggcggca taacgacaag cacaaactct cagcttctat
     2101 gactgaactt ttatgatgtc agatttacgg ctgtgggttt gactttattc ctgagaccgt
     2161 gacatttagc attgatcgcg aggtatggag tccatgaacc gcacgcaaat catcatcgtc
     2221 cgccatggcc agactgagtg gaacattcgc ggcattcgcc agggttatct cgacagtccg
     2281 ctgacggatc gggggctcgc tcaggcgaag gcgttggggc agcgtttggc gcgggagaag
     2341 tttacggcgt tgtacagcag cgatctcgga cgggcgatgc agacggcgcg ggagatcgcc
     2401 aacgtgacgg gacatgggat cttgaccgac gcgcgcttgc gcgagcgcca tctggggatt
     2461 ttccaagggc tcagcggtga ggagatcgtc gccaagcatc cggaagagcg gcgggcgatg
     2521 cgcagccagg ggcctggcta tgtcattccc ggtggcgaga gcatggtgca gcaggtcgaa
     2581 cgcaatatgg cttgcctcaa cgacctcgcg gccagacatg taggcgaaca gatcgttgtg
     2641 gtcacccatg gcggggtggt gagcggtttt tttcgccaca ccttggagat ttctct
//
LOCUS       DATIRS010000553         1599 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1713620, whole genome shotgun sequence.
ACCESSION   DATIRS010000553 DATIRS010000000
VERSION     DATIRS010000553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1713620"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1064)
                     /locus_tag="VLM90_06995"
     CDS             complement(<1..1064)
                     /locus_tag="VLM90_06995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12745.1"
                     /translation="MARRRWRRFIVLCGLAIFSANSVAALAAEKAPFYPGKTLTIIIN
                     FAAGGPTDIESRIFAKHLTRQIPGQPTVTVQNMGGGGGLTAVNYLGEVAKPDGMTAAY
                     FTGSLFLQQIKEPALRVDLSKFGFITGVHGVTVSYIRADVAPGMKKPSDFLKAQKFRA
                     AGLGVNSSKDVRFRLSFDLLGLKYDYVTGYNNSSDARLAVQRNEAQYHDESLPGYRTQ
                     VEPQMVKTGMVIPLYYTDLVAPSGEILVSRDVPELLPFSYFYREMLGKPPAGIKYEAL
                     KAANMSSTNMTRMVLLPPKVPAESIAILRKAFDALSRDQDFLQDAIAAMRFQPRFEVG
                     AAGEHLFKQASQVSPEVVNFL"
     gene            complement(1266..>1599)
                     /locus_tag="VLM90_07000"
     CDS             complement(1266..>1599)
                     /locus_tag="VLM90_07000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12746.1"
                     /translation="AYNFRIERMKSDGAPVDWIESFDPIVATISGIALSAKAASPNGA
                     KLLINFATSRKGQEMVREMRRIPARTDVKPQAAKMDQSKLKLKAVPKEVYSGLDDHAR
                     EFRKIFGM"
BASE COUNT          302 a          449 c          465 g          383 t
ORIGIN      
        1 aggaaattga caacttcggg agacacttgt gacgcctgtt tgaacaagtg ctcgccggcc
       61 gcgccgactt cgaaacgcgg ctggaagcgc atggccgcga tcgcgtcctg gaggaaatcc
      121 tgatctctcg acaaagcgtc gaaggctttg cgcaggatcg cgatcgattc cgcgggaact
      181 ttaggcggca agagcaccat gcgggtcatg ttggtgctcg acatattcgc tgctttcagc
      241 gcttcgtatt tgatacccgc aggcggtttg ccaagcatct cccgataaaa gtagctgaac
      301 ggcaatagct ccggtacgtc gcggctgact aagatctcgc cgctgggcgc gaccaaatcg
      361 gtgtaataga gcgggattac catgccggtc ttgaccatct gcggctcgac ctgagtgcgg
      421 tagccgggca ggctttcatc gtgatactgg gcttcgttgc gttgcacggc gaggcgggcg
      481 tcggaactat tattataacc ggttacatag tcgtacttca ggcccaagag atcgaaggag
      541 agacggaagc gcacgtcttt ggagctgttc acgccgagac ctgcggcgcg aaatttttgc
      601 gcctttaaaa aatcgctggg cttcttcatg cctggcgcca cgtcggcgcg aatgtacgac
      661 accgtgacgc catggacgcc ggtaataaag ccgaacttgc tcagatcgac gcgcaacgcc
      721 ggctctttga tctgttggag aaacaagctg ccggtgaagt atgcggcggt catgccgtcg
      781 ggcttggcca cttcgccgag atagttgacc gcggtcaaac cgccgccgcc acccatattt
      841 tgcacggtca ccgtcggctg cccaggtatc tgcctggtta aatgtttggc gaaaatccgg
      901 ctttcgatgt cggtggggcc gccggcggcg aagttgatga tgatagtgag agtcttacct
      961 ggatagaagg gagctttctc ggcggccaat gccgcgaccg agttcgcgct aaatattgcg
     1021 agcccgcaga gaacgataaa ccgccgccaa cgccgacgtg ccatctggtt tctccttgta
     1081 tcgctatcct gatagatttg tccgcctgtg gaaatcttgt ggccacgcga ttgccgcctc
     1141 gccgcacccc agtgcgtatc atgatacgcc cctacgtcca gactttctct ttggattttt
     1201 ttgcgttctt tgcggctatc tctccggttc cgattctgct tcggttacag ctgtaccgtg
     1261 ctaggttaca tgccgaatat cttgcgaaac tcgcgcgcgt gatcgtcaag tcctgagtac
     1321 acctctttgg gcaccgcttt caacttcaat ttgctttggt ccatcttcgc cgcctgcggt
     1381 ttgacgtcgg tgcgcgccgg gatgcggcgc atctcgcgga ccatttcctg gcctttgcgc
     1441 gaagtcgcga agttgatcag cagcttggcg ccattggggc tggctgcctt ggcgctgagc
     1501 gctatgccgc tgatggtcgc gacgatggga tcgaaacttt cgatccaatc cactggcgcg
     1561 ccgtcgctct tcattctttc gatgcggaag ttataggcc
//
LOCUS       DATIRS010000554         1988 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_926607, whole genome shotgun sequence.
ACCESSION   DATIRS010000554 DATIRS010000000
VERSION     DATIRS010000554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1988)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1988)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1988
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_926607"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..183)
                     /locus_tag="VLM90_07005"
     CDS             complement(<1..183)
                     /locus_tag="VLM90_07005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12747.1"
                     /translation="MHKGRILFCVFLILVAAAAIYLALEWPFNAALFPLAVGIPLLLL
                     AATQLWQLFLGKAELID"
     gene            complement(176..1687)
                     /locus_tag="VLM90_07010"
     CDS             complement(176..1687)
                     /locus_tag="VLM90_07010"
                     /inference="COORDINATES: protein motif:HMM:NF014073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HSQ12748.1"
                     /translation="MFDAFIDGLFLVLQWKAFSLMLVGMGLGFCVGLLPGIGGAATLA
                     LMIPFVFKMQPAEAFAFLLGMHAVAATTGDITSVLFGVPGEAISAATVVDGHPMAKNG
                     EAGRALGAALMSSLVGAVIGAVALALAIPIVRPLVLAFGSPELFMLAVIGISCITSLS
                     GAGAHGQVKGFAMGLFGLLVSTIGQERQSGSLRFDMGLMYLWEGLDFVPVLVGVFAIP
                     EIIDLTVRGTAIAGERPAENLRSGVIEGIKDTFRHFWLVFRCSVVGVFVGILPGAGGG
                     VAQWMAYAHAVQGAKDAKDRERFGKGDVRGVLGPGAANNSKEGGELIPTVAFGVPGSG
                     AMAILLSAFLIMGLSPGPDMLTKHLPITFSMVWTLVIANIIAVLLCLTILDQLAKVTN
                     VRGGLIIPFVLLLVFVGSYTANGQITDLLVTLIFGVISYFMVLFGWPRPPFVLGFVLG
                     KVIETYFFISVARYGFAWLTQPMVIFLIVLMLFVIAYPYIQKRRQRAQSQANA"
BASE COUNT          517 a          583 c          564 g          324 t
ORIGIN      
        1 gtcgataagt tctgccttgc cgagaaatag ctgccagagc tgagtcgcgg ccaggagcaa
       61 aagtggaata cccaccgcca gcggaaacaa agccgcatta aacggccatt cgagcgccag
      121 gtagatcgcc gcagcagcaa ccaagatgag gaaaacacag aagagtatgc ggcccttatg
      181 cattcgcttg gctctgggcg cgctggcgcc gtttctggat atacggataa gcgatcacga
      241 agagcatgag aacgattaga aagattacca tcggttgcgt gagccaggca aagccgtagc
      301 gcgcgactga aatgaagaaa taggtctcga tgactttgcc caagacaaag ccgagaacga
      361 agggcggacg aggccagccg aacagcacca taaaatagct gatcacgccg aagatcagcg
      421 tgacgagcaa atcggtgatc tggccgttgg cggtgtaact gccaacgaaa accagcagca
      481 gcacaaacgg aatgatcaga ccgccgcgca cgtttgtcac tttggctaat tgatcgagga
      541 tcgttaggca taagagcacg gcgatgatgt tcgcgatcac caaagtccaa accatcgaga
      601 aggttatcgg cagatgcttg gttagcatgt caggtccggg tgagaggccc atgatcaaaa
      661 aagcgctgag caggatcgcc atggcgccgc tgccgggaac gccgaaggcg accgtcggga
      721 tcagttcgcc gccttctttc gaattattcg ccgcgcccgg tccgagaaca ccgcgcacat
      781 cgcctttgcc gaagcgttct ctgtccttgg catccttggc gccttggacg gcatgagcgt
      841 aagccatcca ttgggcaacg ccgccgcccg ctcctggcag gatgccgacg aatacaccga
      901 caactgagca gcgaaacacc agccaaaaat ggcgaaaggt atctttgatc ccttcgatca
      961 cgccgctacg caaattctcc gccggccgct cccccgcgat cgcggtgccg cgcacagtga
     1021 gatcgataat ttccgggatc gcgaagacac cgaccaacac tggcacgaag tcgagacctt
     1081 cccacaaata catcaacccc atgtcaaaac ggagcgaacc ggactgacgc tcttggccaa
     1141 tggtcgacac cagcagaccg aacagaccca tagcgaagcc cttgacctgg ccgtgcgccc
     1201 cggcgccgct gagcgaggtg atacaggata tgccgataac cgccaacatg aacagctccg
     1261 gcgaaccaaa ggcgagcacc agcgggcgga cgatcggaat tgccagcgcc aacgccaccg
     1321 cgccgatcac cgcgccgacc agcgagctca tcagcgcggc gccgagggcg cgtccagcct
     1381 cgccattctt tgccatcgga tgaccatcga caaccgtggc ggcggagatc gcctcgccgg
     1441 gcacaccgaa aagcaccgag gtgatatcgc cagtggtcgc ggcgacggcg tgcatgccga
     1501 gcagaaacgc gaacgcctcg gcgggctgca ttttgaaaac gaacgggatc atcaaggcga
     1561 gagtggccgc cccaccgatc cctgggagca ggccgacgca gaagccaaga cccatgccga
     1621 ccagcatcaa gctgaaagct ttccattgaa gcaccaggaa gagaccgtcg atgaatgcgt
     1681 cgaacatcgt ctagctgcct ttaccacggt gcctggaccc ggttgcgaga ttgccggcgt
     1741 aactgggcga ccaacaccgg cgcgactata tgggagcgac gattttactg tcaagcaaag
     1801 attcgtaccg agcggcgaaa tgtgagaaaa gatttaaccg cagacccagg gttagtccaa
     1861 aaagttagct ggaaattgtt gtaacagcgc tgctgcgcgt aatcgcagat ccacacttgt
     1921 gaccactgga ttgcgacaac tctttaccga gaaatttctc taccgacaga taatttagtg
     1981 cggcagag
//
LOCUS       DATIRS010000555         2707 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_730421, whole genome shotgun sequence.
ACCESSION   DATIRS010000555 DATIRS010000000
VERSION     DATIRS010000555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2707
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_730421"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..590
                     /locus_tag="VLM90_07015"
     CDS             <1..590
                     /locus_tag="VLM90_07015"
                     /inference="COORDINATES: protein motif:HMM:NF013986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008047 - enzyme activator activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydratase activase"
                     /protein_id="HSQ12749.1"
                     /translation="SCHARGASYLFPNTRTVIDMGGQDAKGIKIGIDGDVKDFVMNDK
                     CAAGTGRFLGSAADALAIRLDDIGEISLKAKNPVRLTTVCTVFVESDIMSYLAQGKKT
                     EDILGGVHSAIAARTISLIRRVGIEPEVTFTGGVSKNIGMVRALEEKLGMKLNVSPDS
                     HFVGALGASIFALERAAKATGEKQQATGIEAGPTV"
     gene            605..1441
                     /locus_tag="VLM90_07020"
     CDS             605..1441
                     /locus_tag="VLM90_07020"
                     /inference="COORDINATES: protein motif:HMM:TIGR00241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008047 - enzyme activator activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydratase activase"
                     /protein_id="HSQ12750.1"
                     /translation="MTFVAGIDMGAKSTKAVVLDGEKQICGKAAIKTRPDFAAVAKEV
                     LNLALAQAGLKEGDLNYIATTGFGRYNVPFRDVQITDITCVGRGAVFLFPKTRCVLDI
                     GAQSTRALRVSDTGKVREFRTNDKCAAGAGGFIERACKYLEVNIDQVGDLSIQANKPQ
                     TISSVCAVLAESEIINHVSNGETIENILRGVHNSLSSRALALLKRSGMEDEVTFVGGV
                     ARQKGMVKALEETLKRKVNVSAEPELVGALGAALLALRRLEKIREDKKTAVVGEEARA
                     AL"
     gene            1438..2199
                     /locus_tag="VLM90_07025"
     CDS             1438..2199
                     /locus_tag="VLM90_07025"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ12751.1"
                     /translation="MKLQGKTALIAGGGGGIGRAVALALAHEGAKTAIADIVKANAEK
                     VSGEVKAAGVDAMACQVDLTKKADVDRMVGEIIERFGQIDILVNCQGWDRLEPFVESS
                     EETWEKLLAINFKSVLYTAHAVLPNMISHGFGKIVNISSDAGRVGSSWEAVYAGAKGA
                     VIAFSKTIAREVARYKINVNVVCPGLTETPLLQAVRGQSEQTAKIIDAVTKATPFRRP
                     AQPEEIAEAVLFLTSPQANFITGQTLSVSGGLTMV"
     gene            2332..>2707
                     /locus_tag="VLM90_07030"
     CDS             2332..>2707
                     /locus_tag="VLM90_07030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12752.1"
                     /translation="MDNRVKAIDIMYYVATPEFIARWNEAKKGELICRMEKAIGGLPQ
                     YDSFDAMIAKMDEAGVEKVFITQTKMWSYRNKWMYMDTQLDEVAQYTKRYPDRFVGLA
                     GYNPFRIKESLAEIDRAVKEYGF"
BASE COUNT          651 a          777 c          809 g          470 t
ORIGIN      
        1 tcagctgcca tgcgcgcggc gcgagttacc tctttcccaa cacccgcacg gtcatcgaca
       61 tgggcggcca ggatgccaag ggcatcaaga tcggcatcga tggcgatgtc aaagacttcg
      121 tcatgaacga taaatgtgcc gccggcacgg gaagatttct cggcagcgcc gccgacgctc
      181 tggcgattcg cttggacgat atcggcgaaa tttcgctcaa ggccaaaaac ccggtgcggc
      241 tgaccaccgt gtgcacggtg ttcgtcgagt cggacatcat gtcctacctg gcccagggca
      301 agaagaccga agatatcctc ggcggcgtgc acagcgccat cgccgcgcgg acgatttcgc
      361 tgattcgtcg cgtcggcatc gagccggaag tcactttcac cggcggggtt tcgaaaaata
      421 tcggcatggt gcgcgcgctg gaagaaaaac tcggcatgaa actcaacgtc agcccggatt
      481 cccacttcgt cggcgccctc ggcgcgagca tcttcgccct cgaacgcgcc gccaaggcaa
      541 ccggagaaaa acagcaggca accggaatcg aggccgggcc tactgtctaa gttaaggagg
      601 tatcatgacg tttgtcgctg gcatcgacat gggcgctaaa tcgaccaagg cggtggtctt
      661 ggatggggag aagcaaattt gtggcaaggc cgcgataaaa acccgtccgg atttcgccgc
      721 ggtcgccaag gaggtgctga atctagcact tgcacaggcc gggctcaaag agggcgatct
      781 aaattacatc gccaccaccg gcttcggccg ctataacgta cccttccgcg acgttcagat
      841 caccgatatc acctgcgtcg ggcgcggcgc ggtttttctc tttcccaaga cccgctgcgt
      901 gctcgatatc ggcgcgcaga gcacgcgggc gctgcgggtc agcgacaccg gcaaggtgcg
      961 tgagttccgc accaacgaca agtgcgccgc cggcgccggc ggcttcatcg aacgcgcttg
     1021 caaatatctc gaggtcaata tcgatcaggt cggcgatctt tccattcaag caaataaacc
     1081 acagaccatc agcagcgtct gcgccgtctt ggccgaatcc gagattatca atcacgtctc
     1141 aaacggcgag accatcgaaa atattctgcg cggcgtccac aactcactct cctcccgcgc
     1201 cctagcattg ctcaagcgct cgggcatgga agacgaggtc accttcgtcg gcggcgtggc
     1261 gcggcaaaaa ggcatggtca aggcgctgga ggaaacactc aaaagaaaag tcaacgtcag
     1321 cgcggagccg gaactggtcg gcgcgttggg cgccgccctg cttgctttgc ggcgtctgga
     1381 gaagattcgg gaagacaaga aaacagccgt ggtcggagag gaggcaagag cagcgttatg
     1441 aagctacaag gaaaaaccgc tctgatagca ggaggcggag gaggaatcgg ccgcgccgtc
     1501 gcgcttgcat tggcacatga aggcgcaaag accgcgatcg cggatatcgt caaagccaat
     1561 gctgagaaag tcagcggcga ggtgaaggcg gccggcgtgg acgcgatggc ctgccaagtg
     1621 gatcttacca agaaggccga cgtcgaccgc atggtcggcg aaatcatcga gcgcttcggg
     1681 cagatcgata ttttagtcaa ctgccagggc tgggaccggc tcgaaccttt cgtcgaaagc
     1741 agcgaggaga cttgggaaaa actcttggcg atcaatttca aatcggttct ctacacggcg
     1801 cacgccgtgc tgccgaacat gatctcccac ggcttcggca agatcgtcaa catcagctcc
     1861 gacgccggcc gcgtcggctc cagttgggaa gcggtttatg ccggcgccaa aggcgcagtg
     1921 atcgcgttct cgaaaaccat tgcccgcgaa gtggcgcgct acaagatcaa cgtcaacgtc
     1981 gtctgtcccg gtctcacgga aacgccgctg ctgcaagccg tgcgcggcca atcggagcag
     2041 accgcgaaga tcatcgacgc ggtgactaaa gcgacaccat tccgccgacc ggctcagccg
     2101 gaagagatcg ccgaagcggt gctgttctta acttcgccgc aggcgaattt tatcactgga
     2161 cagacactaa gcgtcagcgg cggattaacg atggtgtagg gaagtgacag agaaagagac
     2221 agagaaagag ttagagatgg cgaaggggtg gagcggtctc tatctcaatt ctctatccac
     2281 ccagcgaaat tgaagacgcg gaacgaggca ggcacacaag aggaactgag aatggataat
     2341 cgagtgaaag ccatcgacat catgtactac gtcgccacgc cggagttcat cgcgcgttgg
     2401 aacgaagcca agaaaggcga gctcatctgc cgcatggaaa aagccattgg cggcctgccg
     2461 cagtacgaca gtttcgacgc catgatcgcc aagatggacg aagccggcgt ggaaaaggtt
     2521 ttcatcaccc aaaccaagat gtggtcctac cgcaacaagt ggatgtacat ggacacccag
     2581 ctcgatgaag tcgcccagta caccaaacgt taccccgacc gcttcgtcgg cctggccggc
     2641 tacaatccgt ttcgcatcaa agagtcgctg gcggaaatcg accgcgcggt caaagagtac
     2701 ggcttca
//
LOCUS       DATIRS010000556         1867 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1418710, whole genome shotgun sequence.
ACCESSION   DATIRS010000556 DATIRS010000000
VERSION     DATIRS010000556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1867)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1867)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1867
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1418710"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..895)
                     /locus_tag="VLM90_07035"
     CDS             complement(<1..895)
                     /locus_tag="VLM90_07035"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12753.1"
                     /translation="MQPIIDADTHISESAEMWAMFDKEMYGRRPVLLSLPDDTLYGNW
                     NKTWLIDGNIFPKPAGKGGFRLITPSASKVQFNRKDLSVACRDMTDIPGRLADMDRLG
                     IASQVVYPTLFLVYLTDDPALDVALSRAYNRFIAQACAQSIGRIHWVAIPPLRDIAES
                     VKELQWAKQNGAVGVFFRGMEGNYTLDNPRFHPVYQAASDLDLPICVHTGSSTPAISE
                     MFDLERNRQWSHSAFPPLHAFRDLVLNRIPDMFPKLRFGFLEASASWIPFLIHKLKRD
                     NTKRWKSSWKSPRDLFEDCRFY"
     gene            complement(967..>1867)
                     /locus_tag="VLM90_07040"
     CDS             complement(967..>1867)
                     /locus_tag="VLM90_07040"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NrtA/SsuA/CpmA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HSQ12754.1"
                     /translation="PLALWAQPTTLRVGTNSPASAESVLFSIARDAGILKQNQLDVEV
                     IFIAGGTLSMQALIGKSLDFLCTGGTPYIVANLEGAQTKMIAGVNNKLPYGFVSLANI
                     KTPAQLKGKRIGISRFGSTDDFAVKLALSQFGLNPKSDVSITQVGSAATRLTALQAGS
                     IDAAVLTLGLVQIGQKSGLNLLLDFIEKDIEYQQVAIIARDDLLKSRADLVRRFMKSY
                     LESVRFYKTQKEIAIRETMKRLRTTDRAIGEFDYHQRARSLPDDGKPSIKGMQLALDD
                     IAKDNPKAKNLTVQHLIDLSFLP"
BASE COUNT          389 a          497 c          576 g          405 t
ORIGIN      
        1 catagaaacg acagtcttcg aacaaatccc gcggcgactt ccacgacgac ttccagcgct
       61 tggtgttgtc acgtttaagt ttgtgaatca gaaatggaat ccagctcgcc gaggcttcga
      121 gaaaaccgaa gcgcagcttg ggaaacatgt cggggatccg gttcaacacc aaatcgcgga
      181 aggcgtgcag tggcgggaat gccgagtgcg accactggcg gttacgctcg aggtcgaaca
      241 tctcgctgat cgccggagtg ctcgacccgg tatgaacgca gatcggcagg tcgagatcgc
      301 tggcggcttg gtagaccgga tgaaaacgcg gattgtcgag tgtgtaattc ccttccatac
      361 cgcggaagaa cacgccgacg gcgccgtttt gcttggccca ttgcaattcc ttcaccgact
      421 cggcgatgtc gcgcaacggc gggatcgcca cccaatgaat gcggccgata ctttgggcac
      481 atgcctgggc gataaagcgg ttgtaggcac ggctcaacgc gacatcgagc gcggggtcat
      541 cggtgaggta gaccagaaac aaagtcggat agacgacctg actagcgatg ccgagacggt
      601 ccatgtcggc caagcgaccg gggatatcgg tcatgtcgcg gcaggcgacg ctgaggtctt
      661 tgcggttaaa ctgaaccttc gacgccgacg gtgtgatcaa gcggaagccg cccttgccgg
      721 ccggcttggg gaaaatattg ccgtcgatga gccaggtctt gttccaattg ccgtacagag
      781 tgtcgtccgg cagcgatagc aacaccgggc ggcggccata catttctttg tcgaacatgg
      841 cccacatctc tgcggattcg gaaatatggg tgtcggcgtc gatgatcggt tgcatgaaaa
      901 cctccggtga atttggcttc ggcgtctggg cttgcaaacc aaatcgccag acgccagacg
      961 atttccctag ggcaaaaaac tcaagtcaat tagatgttgt acggtcaagt tcttcgcctt
     1021 gggattatcc ttggcgatat cgtcgagagc gagctgcatg cctttgatgc tcggcttgcc
     1081 gtcgtcgggc agggagcggg cgcgctgatg atagtcgaac tcgccgatgg cgcggtcggt
     1141 ggtacgcagt cgtttcatgg tctcgcggat ggcgatttct ttttgggtct tataaaaacg
     1201 cacgctttcg aggtaacttt tcatgaagcg gcgcactagg tcggcgcggc ttttgagcag
     1261 atcgtcgcgc gcgatgatcg cgacttgctg gtactcgatg tctttttcaa tgaaatcgag
     1321 cagcaagttg aggccgctct tctgaccgat ctggaccagt ccgagcgtga gcaccgcggc
     1381 atcgatgctg ccggcttgga gcgcggttaa acgagtggcg gcgctgccta cttgggtgat
     1441 gctgacatcg cttttcggat tcaaaccgaa ttgtgacaag gcaagtttga ccgcgaaatc
     1501 gtcggtgctg ccgaaacggc tgatgccgat tcgtttgcct ttgagctggg ccggagtctt
     1561 gatgttggcc agcgagacga agccgtaggg cagcttgtta ttcacgccgg cgatcatttt
     1621 cgtctgcgcg ccttcgagat tcgcgacgat gtagggcgtg cccccggtgc agagaaaatc
     1681 caaactctta ccgatgagcg cctgcatcga caacgtaccg ccggcgataa aaatcacttc
     1741 gacgtcgagc tggttttgtt tgagaatgcc ggcatccctg gcgatgctga acaacaccga
     1801 ctcggcgctc gccggcgagt tagtgccgac ccgaagcgtg gtcggctgcg cccatagcgc
     1861 caacggc
//
LOCUS       DATIRS010000557         1935 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_139598, whole genome shotgun sequence.
ACCESSION   DATIRS010000557 DATIRS010000000
VERSION     DATIRS010000557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1935)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1935)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1935
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139598"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            358..1437
                     /gene="aroG"
                     /locus_tag="VLM90_07045"
     CDS             358..1437
                     /gene="aroG"
                     /locus_tag="VLM90_07045"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: protein motif:HMM:NF006723.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HSQ12755.1"
                     /translation="MKYQTDDLRIKEIKELLPPGRLLADIPIGDKAAQTVFEARRDIH
                     RILHGADDRLLVIMGPCSIHDVKAAKEYAARLKEVKERCAADLLIVMRVYFEKPRTTV
                     GWKGLINDPNLDGSYQINDGLRVGRQLLRELNDSGMPAGCEFLDMISPQYTADLVSWG
                     AIGARTTESQVHRELASGLSCPVGFKNGTDGNVRIAMDAIRAAQAPHHFLSVTKDGHS
                     AIVSTLGNEDCHIILRGGKQPNYDAANVDAAGKSLAESGICARIMIDCSHGNSGKEPA
                     KQVGVGQDVAGQVAAGDARIFGVMIESHLKAGRQDLIPGKTLISGQSITDACVGWEDS
                     RALIDTLADAVRQRRLKAAENGEAE"
     gene            1580..>1935
                     /locus_tag="VLM90_07050"
     CDS             1580..>1935
                     /locus_tag="VLM90_07050"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12756.1"
                     /translation="MFKKFTSLFYGWHMVGASAAVRLLGAGLHSYGFTVFFLPLSQEL
                     NLSRTATSFAFSLARAEGAIEGPIVGHLLDRYGPRPVMLATVILMGVGYLLLSQVDSY
                     WSFVLVYTVLISFTHSG"
BASE COUNT          410 a          598 c          530 g          397 t
ORIGIN      
        1 ggcggcgtca gcgccccgct gatcggcggc ttcctggtcg acaagttcaa tccgggcgtg
       61 cgcttcctgg cctatgcacc gttattgatt ctggccgccg tcctgcttgc cgtcatggcg
      121 cgcgaaaccc tcgaaaagta aactggcgcc gtcgcgatta gcgatggttc aattcgatcg
      181 taacgattct ttcttaatgt aggggcagac ccccgtgtct gccctcgggg atgggcgacc
      241 acagggggtc gcccctacaa ttgattgcga aactgaacca ctaccgcggg attccctgga
      301 tagatttccg gggaatattg tctataatga cgccatcgaa ttctgaaaca aatgatcatg
      361 aaatatcaaa ccgacgacct aagaattaaa gagatcaaag agttactacc gccaggccgc
      421 ctgctggctg acattcccat cggcgacaaa gcggcgcaga cggtgttcga agcccgccgc
      481 gatatccatc ggattctgca tggcgccgat gaccgcttgt tggtcatcat gggcccgtgc
      541 tcaatccatg atgtcaaagc ggcgaaggaa tacgccgcgc gcttgaagga ggtcaaagaa
      601 cgctgcgccg ccgatttgtt gatcgtcatg cgcgtctact ttgaaaagcc tcgtaccacg
      661 gtgggatgga aaggcctgat caacgatccc aacctcgacg gtagttatca aatcaacgat
      721 ggactgcgcg tcggccgtca gctgctgcgc gaactcaacg actccggcat gcccgccggc
      781 tgcgaattcc tcgacatgat ctcgccgcag tacacagcgg acctggtctc gtggggcgcc
      841 atcggcgcca gaaccacgga aagccaggtg caccgcgaac tcgcctccgg cctgtcttgt
      901 ccggtcggct tcaagaacgg caccgacggc aacgtgcgca tcgccatgga cgccatccgc
      961 gccgcccagg cgccgcatca ttttttgtcg gtgaccaaag acggccattc cgccatcgtc
     1021 tcgaccctcg gcaatgaaga ctgccatatc attctacgcg gcggtaagca gcccaactac
     1081 gacgccgcca acgtcgatgc cgcaggtaag agtcttgccg aatccggcat ctgcgctcgc
     1141 atcatgatcg attgtagcca cggcaacagc ggcaaggagc cggccaagca ggtcggcgtc
     1201 ggtcaagacg tagccggcca agtcgccgcc ggcgacgcgc gcatcttcgg ggtcatgatc
     1261 gaaagccacc tcaaagccgg ccgccaagat ctcatcccgg gcaaaaccct gatctccggc
     1321 caaagcatca ccgacgcctg cgtcggttgg gaagacagcc gcgccttgat cgacactctc
     1381 gccgacgccg tgcgccaacg ccggttgaaa gccgcggaaa acggcgaagc ggaatgacgg
     1441 caatggataa ttgagaatgg ataatggata atttccagaa tctgcattga gatcttagtc
     1501 ccccactatc cattctccat tctcaattct ccattatcca ttggcttgtt tacccaccga
     1561 aattcatcga taaaatcgaa tgttcaaaaa gtttaccagc cttttctacg gctggcatat
     1621 ggtcggcgct tccgccgcgg tgcggttgct cggcgccgga ctgcatagtt acggcttcac
     1681 ggtgttcttt ctgccgctca gccaagaatt gaatctcagc cgcacggcaa cttccttcgc
     1741 gttttcattg gcgcgcgccg agggcgccat cgaagggccc atcgtcggcc atctgctcga
     1801 ccgctacgga ccgcggccgg tgatgctcgc caccgtcatc ctgatgggcg tcggctactt
     1861 gctgttgtcg caagtcgata gctactggag cttcgtgctg gtctacaccg tgctgatctc
     1921 gttcacgcac tcggg
//
LOCUS       DATIRS010000558         1651 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_533272, whole genome shotgun sequence.
ACCESSION   DATIRS010000558 DATIRS010000000
VERSION     DATIRS010000558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1651
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_533272"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..575)
                     /locus_tag="VLM90_07055"
     CDS             complement(<1..575)
                     /locus_tag="VLM90_07055"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ12757.1"
                     /translation="MNKVMVVTGGSRGIGAATARLAAQRGYAVCVNYLRDREAANRVV
                     DAIVQAGGSAIAVGADVSSEADVMRLFTAIDESLGSVNALVNNAAINAVQMRVESMNA
                     ERLARVFAVNVTGSFLCAREAVRRMSTRHGGSGGAIVNISSVASRLGSSEEYVDYAAS
                     KAAIDTFTIGLAKEVATDGIRVNAVRPGVVYT"
     gene            complement(656..1540)
                     /locus_tag="VLM90_07060"
     CDS             complement(656..1540)
                     /locus_tag="VLM90_07060"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSQ12758.1"
                     /translation="MQARAMTRFVETGERTGRPEQLSLFDKVGVVLSGVSIPRPRNLL
                     TPAKFNLLFSTHRIVHSNGETLEAWYLAGRDDAPVVLMFHGYAVSKSTMLSTARAFHE
                     LGLSTLLVDFYGSGGSSGSGTTIGVNESDDVAATVAYAKTVWPQRKIVLYGISMGGAA
                     VLRAIAVNGVTPDAAIIEATFDSLLNTGKNRFRAMDLPPSPFTELLLFWGSVQQGFNF
                     FAHNPVEYAAQVNCPTLVLHGEKDTRVTVTEARRIAAALGKKGRFVAFSALPHTAIVD
                     ARRDDWMKEVGQFMQAFE"
BASE COUNT          390 a          514 c          438 g          309 t
ORIGIN      
        1 gtgtaaacga ccccggggcg aacggcgttg acgcgaatac cgtccgtcgc cacttctttc
       61 gccaaaccga tggtgaaagt gtcaatggcc gccttcgaag cggcataatc gacatattcc
      121 tccgaagaac cgagacggga cgctaccgaa gaaatattga caatggcgcc gccgctgccg
      181 ccatgccggg tcgacatccg ccgcaccgcc tcgcgagcgc agagaaaact gcctgtgaca
      241 ttgacggcaa agacccgcgc caacctttcg gcattcatgg attcgacgcg catctgcaca
      301 gcgttgatgg cggcgttgtt caccaatgcg tttaccgagc cgagggattc gtcgatggcc
      361 gtaaacaagc gcatcacatc cgcttcggag ctcacatcgg caccgaccgc gatcgccgaa
      421 ccgccggctt gaacaatggc gtcgacgacg cggttcgccg cctcacggtc gcgcagatag
      481 tttacgcaca ccgcgtaacc ccgctgcgcc gcaagccgcg ccgtcgcggc accgatgccg
      541 cggctgccgc cggtgacaac cataaccttg ttcatatctc caaatgtcct agcatccagg
      601 ctaaaggtat gcgaggtgaa acttatggat atcgatgcgt cagccgccac ctcagctatt
      661 caaacgcttg cataaattga ccgacttcct tcatccaatc gtcgcgccgg gcatcgacga
      721 tcgccgtatg cggcagcgcg gagaaggcga cgaagcgccc cttcttaccg agcgctgccg
      781 cgatccgccg cgcttccgta accgttaccc gcgtgtcctt ctcgccatgg agcaccaacg
      841 ttgggcaatt gacctgcgct gcatactcca caggattatg ggcaaagaag ttaaaccctt
      901 gctgcacact gccccagaaa agcaacagct cagtgaaagg cgacggtggt aggtccattg
      961 cacgaaaacg attcttaccg gtgttcagta agctgtcgaa cgtcgcttcg ataattgccg
     1021 catctggcgt cactccattt actgcaatag ctcgcagcac agccgcacct cccatggaaa
     1081 tgccgtacaa aacaatcttg cgttgcggcc agactgtttt ggcgtaggca acggttgccg
     1141 cgacatcatc ggattcattc acgccaatgg tcgtgccgga acccgacgaa ccgccggaac
     1201 cgtaaaaatc caccagcagt gtcgacaatc cgagctcgtg gaacgcccgc gccgtcgata
     1261 acatcgtcga cttactgaca gcataaccgt gaaacatgag aactaccggt gcatcgtctc
     1321 tgccagcgag gtaccacgct tcaagagtct cgccgttcga gtggacgatc cgatgggttg
     1381 aaaacagtag gttgaatttc gccggcgtaa gcaaattccg cggccgcggg atgctcaccc
     1441 cggaaagcac aacaccaact ttatcaaaca agctcaattg ctcgggccgc cccgtacgtt
     1501 cgccggtctc gacaaagcga gtcatcgccc gcgcttgcat gaaggcgagg aagttggcgc
     1561 taacgaaggc gctaactaaa gcggcagcga acagtttggc gaaacgattc accgcgaatt
     1621 caagccactg gggttagcat attggcaaca g
//
LOCUS       DATIRS010000559         2233 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_730732, whole genome shotgun sequence.
ACCESSION   DATIRS010000559 DATIRS010000000
VERSION     DATIRS010000559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2233
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_730732"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..283
                     /locus_tag="VLM90_07065"
     CDS             <1..283
                     /locus_tag="VLM90_07065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12759.1"
                     /translation="ITLLSSGQEAGSLYGGLASLFDSFRYSKLGFKASLRNDRLTLQG
                     VESQGGKELLVVGSLLPPTVNIVSHTQTIAFSELVRRLERIKSDKPEVK"
     gene            296..877
                     /locus_tag="VLM90_07070"
     CDS             296..877
                     /locus_tag="VLM90_07070"
                     /inference="COORDINATES: protein motif:HMM:NF018701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbL family protein"
                     /protein_id="HSQ12760.1"
                     /translation="MLKRTIFILAFIVSACVTVNIYFPAAAVERAAEQIVKETWGEPS
                     KSSPPPAPQSDNRFLPWRLASLSLVSAVHAQEADINLSNPAIRSIKDSIKARSEAIKP
                     FMDRGSIGIAADGLLAIRSTDGLNLKERAESKQLVDAENRDRENLYAEIAKANNISNE
                     SIPKIKAIFAKSWLEQSRRGWWIQDGQGNWKKK"
     gene            922..1458
                     /locus_tag="VLM90_07075"
     CDS             922..1458
                     /locus_tag="VLM90_07075"
                     /inference="COORDINATES: protein motif:HMM:NF018095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0070064 - proline-rich region binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HSQ12761.1"
                     /translation="MAHRVAAGAAGLLVALGLALTGMFSADPVQAQQYKGSYETTADV
                     PLREGAGNFHKVITILPKGIQINVVGKEGFWLQVESKHGGKPGYIDEQFARATTAAGA
                     PAGQSPSTSVAGPYRTLREQDLRETPSTNARVVTRLPADIKVNVIRSEGDWLRVESQK
                     GGKPGYLEKRDVERWKDR"
     gene            complement(1517..>2233)
                     /gene="proC"
                     /locus_tag="VLM90_07080"
     CDS             complement(1517..>2233)
                     /gene="proC"
                     /locus_tag="VLM90_07080"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004735 - pyrroline-5-carboxylate
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HSQ12762.1"
                     /translation="VMASDVSEPLRAAVAKELDIKVTADNGVLCDFADIIILAVKPQI
                     VDPVAKEIARKLGSKKLLVSVAAGVPIARIEANLAKGARVVRVMPNIACVVGAGAAGF
                     AGGSNATADDLEKVGAILNSIGVGMPVEEKYLDAVTGLSGSGPAYVLLFMEALADGGV
                     QVGLARDVALKLAMQTVYGAAKMAFESKKHLGDLKDEVTSPGGTTIAGLYAMEQKGFH
                     GVVMDAVVNATRRSRELGAG"
BASE COUNT          506 a          664 c          619 g          444 t
ORIGIN      
        1 aattaccttg ctcagctcgg gccaggaagc cggctcgttg tatggcgggc tcgctagtct
       61 tttcgacagc tttcgctaca gcaagctggg cttcaaagca agtttgagaa acgatcgtct
      121 aaccttgcag ggcgtggaat cccaaggggg gaaagaattg ctggtggtgg gcagtttgtt
      181 gccgccgacg gtaaatatcg tcagccatac tcaaactatc gccttctcgg agctcgtgcg
      241 ccgcttggaa cggatcaaat cggacaaacc agaagtcaaa taacccggag gagcaatgtt
      301 aaaacgtaca atctttattt tggcctttat cgtcagtgcc tgtgtaaccg taaacattta
      361 tttccctgcc gccgcggtgg agcgcgccgc cgagcagatc gtcaaagaaa cctggggcga
      421 accgtcgaag tcatccccgc cgccggcgcc acaaagtgac aatcgatttt tgccttggag
      481 gttggcatca ctgagtctcg tcagcgcagt ccatgcgcag gaagccgata tcaatttatc
      541 gaatccggcg attcgctcga tcaaggactc gattaaagcg cgtagcgaag cgatcaaacc
      601 gttcatggat cgcggcagca tcggcatcgc cgccgacggc ctgctggcga tccgcagcac
      661 cgacggattg aacctgaagg aacgcgccga gtccaaacag ctggtcgacg ccgagaaccg
      721 cgatcgcgaa aacctctacg ctgagatcgc caaggccaac aacatttcca atgaaagcat
      781 tcccaagatc aaagcgatct tcgccaaaag ctggctcgaa caatcccgta gaggttggtg
      841 gatccaagac ggccagggaa actggaagaa aaagtaacga ataagctatc gatacgtcca
      901 acggtcgtga ggagaaccat aatggctcat agagtcgctg ccggtgccgc gggtctgttg
      961 gttgcgctcg gtcttgcgct gaccggaatg tttagtgcgg atccggttca ggcacagcaa
     1021 tacaaaggtt cctacgaaac caccgccgat gttccactac gcgaaggcgc cggcaacttt
     1081 cataaagtca tcacgatcct gcccaagggc atccagatca acgtcgtcgg caaggagggt
     1141 ttctggcttc aggtcgagtc caagcatggc ggcaagcccg gctacatcga cgaacagttc
     1201 gcccgcgcca caacagcggc cggggcgccc gcaggtcaat ccccatcgac gtcagttgcc
     1261 ggcccctatc gcacgctacg cgaacaagac ctgcgtgaaa caccgagcac caatgcccgg
     1321 gtcgtaaccc ggcttccagc ggatatcaaa gtcaacgtca tccgctccga gggtgactgg
     1381 ttgagagtgg aatcgcaaaa gggcggcaag cccggttacc tagagaagcg cgatgtcgaa
     1441 cgctggaagg atcgctagca gaacttggaa gatttgagat tctgcctttt agcttttacc
     1501 ctatgcatta atatccctac cctgccccca actccctcga ccgtcttgtc gcattgacca
     1561 ccgcgtccat aactacgccg tggaaacctt tttgttccat ggcgtaaagt ccggcgatgg
     1621 tggtgccgcc gggggaggtg acttcgtctt tgagatcgcc cagatgcttc ttgctttcaa
     1681 atgccatctt ggcggcgcca taaaccgtct gcatggcgag tttgagcgca acgtcgcggg
     1741 ccaggccgac ctgcacgccg ccgtcggcga gcgcttccat gaacagcaaa acataagccg
     1801 ggccgctgcc gctcaaaccg gtgaccgcgt ccaagtattt ttcttccacc ggcatgccga
     1861 cgccgatgct attgaggatg gcgccgactt tttccagatc gtccgccgtc gcattgctgc
     1921 cgccggcgaa tcccgccgcg ccggcgccga cgacgcaggc aatattcggc atcacgcgca
     1981 cgacgcgggc gcccttggcc aaattggcct cgatgcgcgc gatcggcacg ccggcggcga
     2041 ccgaaaccag gagctttttg ctgcccagct tcctggcgat ctctttggca accggatcga
     2101 cgatctgcgg tttgacggcg agaatgataa tatcggcgaa atcgcatagc acgccgttat
     2161 ccgcggtcac cttgatatcg agttccttcg ccacggcagc gcgcagtggc tcgctgacat
     2221 cgctcgccat cac
//
LOCUS       DATIRS010000560         2118 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1320440, whole genome shotgun sequence.
ACCESSION   DATIRS010000560 DATIRS010000000
VERSION     DATIRS010000560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2118
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1320440"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..407)
                     /locus_tag="VLM90_07085"
     CDS             complement(<1..407)
                     /locus_tag="VLM90_07085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12763.1"
                     /translation="MSEATAAKPVLLRTLAGSWDRAIKILMGATALYYVWASTVGVVS
                     LQYYRGIAVLYSLVIPLLLYKGWQRARGDRPTLVDLLLAAGATASVIYWMVEHEAMAY
                     RAGDYTALDVAMGAIATVIAIEAARRVLGWDMAL"
     gene            complement(416..1390)
                     /locus_tag="VLM90_07090"
     CDS             complement(416..1390)
                     /locus_tag="VLM90_07090"
                     /inference="COORDINATES: protein motif:HMM:TIGR02122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HSQ12764.1"
                     /translation="MKRIILLTILIAATISPAYGQKVERLNFVGGPPSGVFGIFATGI
                     GTYLSRNVANLDVSVTATGGSVENIRRVNGGEAEMGVSFSSDVHEAYFGLEQFKGKPL
                     TNYRASGLIFFGVAHAITYADSGIRSADDLAGKRVAVGNPGSGTFASAERIFRALGVW
                     DKLNRIPLLGAAAGEAMSDGKADAFFWTGPEPDRVTMEAATKKAIRAIDIYTPATKTE
                     FFKQFPYFARYVFAANSYKGITEDTPTIGIPVIWYVHKDLAPALVQKITEAAYNKAGS
                     THMMQVHAGSKDMVAQKALQGVTFPLHKGAEDHWRAAGLQIPEAIRAK"
     gene            complement(1422..>2118)
                     /locus_tag="VLM90_07095"
     CDS             complement(1422..>2118)
                     /locus_tag="VLM90_07095"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase family
                     protein"
                     /protein_id="HSQ12765.1"
                     /translation="FARPATSTMPGLVPLTPMRRIVGQRMTQSKQSAPHFYISMDIDM
                     SSVSKLRNQCKERGDETIPSLNDFILQASARALKDYPSINSSFGEEGIQLHPDINIGV
                     AVALDEGLVVPVIRNADQLNLLELAKQSRALADMAQNKKLFPVDYEGGTFTVSNLGML
                     GVDSFTAIINPPQCAILAVGRVAPRVVTDGDGIEIKSMMTATLSADHRVVDGASAARF
                     LRQIKQYLERGEF"
BASE COUNT          416 a          623 c          632 g          447 t
ORIGIN      
        1 agcgccatat cccaaccgag cacccggcgc gccgcttcga tggcaatgac ggtggcgatg
       61 gcacccatgg cgacatcgag cgctgtatag tcgccggcgc gataggccat cgcttcatgc
      121 tcgaccatcc agtagatcac gctcgccgtc gcgccggcgg cgagcagcag atcgactaaa
      181 gtcggccggt cgccacgagc gcgctgccag cctttataaa gcagcagcgg tatgaccagg
      241 ctgtaaagca cggcgatgcc gcggtagtac tgcagcgaca ccacgccgac ggtggaagcc
      301 cagacgtaat acaacgccgt ggcgcccatt aaaatcttaa tcgcccggtc ccaagagccg
      361 gcgagggtgc gcagcagtac tggttttgcc gccgtggctt ccgacatggt ccggcctatt
      421 tcgcgcggat cgcctcaggt atctgtaggc cagcggcgcg ccagtgatct tcggcgcctt
      481 tgtgcagcgg gaaggtgaca ccctgcaacg ctttttgcgc gaccatgtcc ttcgacccgg
      541 cgtggacttg catcatgtgc gtgctgcccg ccttgttata ggccgcctcg gtgatcttct
      601 gcaccaatgc cggcgccaag tccttgtgca cgtaccagat caccgggatg ccgatggttg
      661 gagtgtcttc ggtgatgcct ttgtaagaat tcgccgcgaa cacgtaacgt gcgaagtagg
      721 gaaactgctt gaaaaactcc gtcttggtcg ccggcgtgta aatatcgatg gcgcgaatcg
      781 ccttcttggt cgctgcttcc atggtcacgc gatcgggctc cggaccggtc cagaaaaaag
      841 catcggcttt gccgtcgctc atcgcttcgc cggccgccgc cccaagcaaa ggaatgcggt
      901 taagcttgtc ccaaacgccg agggcgcgga aaatgcgctc ggcgctggca aaggttcccg
      961 agccggggtt gccgacggcg acccgtttgc cggcgagatc gtcagcgctg cggatgccgc
     1021 tgtcggcata agtaatcgcg tgggcgacgc cgaagaagat caagccactg gcgcgataat
     1081 tggtcaacgg tttgccttta aactgttcca agccaaaata agcttcatgg acgtcggagg
     1141 aaaatgacac gcccatttcc gcttcgccgc cgttgacgcg ccgaatgttt tccaccgaac
     1201 cgccggtggc ggtgaccgac acatcgagat tggcgacgtt tctggaaaga taggtgccaa
     1261 tgccggtggc gaagatgccg aatactcccg acggcgggcc accgacaaaa ttcaaccgtt
     1321 cgactttctg tccgtaggca ggtgagatag tcgcagcgat caagatggtc agcaaaatga
     1381 ttctcttcat ggcaatctcc ttttatccgt cggttaattt tctaaaactc gcctcgttcg
     1441 agatactgct tgatctgccg tagaaaacgc gccgcgctgg cgccatcgac cactcgatgg
     1501 tcagccgaca gtgtcgccgt catcatggat ttaatctcga tgccatcgcc atccgtgacc
     1561 acgcgcggtg cgacccggcc gacggctaga attgcgcact gcggcggatt gatgatggcc
     1621 gtgaagctat cgacgccgag catgccgagg ttcgacacgg tgaacgtccc gccttcgtag
     1681 tcgaccggaa aaagcttttt gttttgcgcc atgtcggcca gcgcgcggct ctgctttgcc
     1741 aattcaagca aattcagctg gtccgcgttg cgaatcaccg gtacgaccag gccttcatcg
     1801 agcgccaccg ctacgccgat gtttatgtca gggtgtagct ggattccctc ctcgccgaaa
     1861 cttgagttta ttgacgggta atctttgagt gcacgggctg acgcttggag aatgaagtcg
     1921 ttgagcgacg ggatcgtctc gtcgccgcgc tctttgcatt ggtttcggag cttactcacc
     1981 gagctcatgt cgatgtccat gctgatgtag aaatgcggcg cgctctgttt gctctgcgtc
     2041 atgcgctggc cgacgatgcg gcgcatgggg gtgagcggca ccaagccggg catcgttgaa
     2101 gttgccggcc gtgcgaag
//
LOCUS       DATIRS010000561         1828 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_435899, whole genome shotgun sequence.
ACCESSION   DATIRS010000561 DATIRS010000000
VERSION     DATIRS010000561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1828
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_435899"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            121..1479
                     /locus_tag="VLM90_07100"
     CDS             121..1479
                     /locus_tag="VLM90_07100"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSQ12766.1"
                     /translation="MSSNGTILVVEDQESARDSLVELLRGEGYDVHEAADGNEGIAKI
                     NQLDLDVVLTDLMMPGADGLAVLKHVSEVSPQTMVVLMTAHASVETAIEAIRAGAQDY
                     LLKPLVFADVLRKIQNLMSHRQLAWENQLLRREVSGHFAPDRPLGRSLAMQEIVKMIM
                     KVAPTPTTVLISGESGVGKEVVARTIHGNSPAKDNVFLPVNCSAIPENLLESQLFGHL
                     KGSFTGAVNSQEGLFQRARGGTIFLDEIGEMPMSLQPKLLRVLEEKTVLPVGSTNPVK
                     VNVRILAASNRDLKAEVEAGRFREDLYYRLCVFEIDIPPLRKRLEDLPALVEHLIHRH
                     NLEMKTAYKGVDSATMRILMSLPWKGNIRELDNVLERAMILGNGEWIAPADLPGHSSA
                     AADGDYRLEDNLTKAIELYEKTHIERTLGKTAGDKIREAELLGLSLSTLYRKIEKLEI
                     EG"
BASE COUNT          406 a          514 c          540 g          368 t
ORIGIN      
        1 gaatggcctg tgatttgctt ttttgcgaat atgccaaagg atcgcaccgg ttaacgccat
       61 gatctttgca aatctgcgaa acacggacgg cgattttgca cttgtgcgaa aaggaatccg
      121 atgagttcaa acggcaccat actcgtagtc gaagaccagg agagcgcccg tgacagtctc
      181 gtcgagctgt tgcgcggcga gggttacgac gtccatgagg cggcggatgg caatgaaggg
      241 atcgccaaga taaatcaact cgatctcgac gtcgtgttga ccgacctgat gatgccggga
      301 gcggatggcc tggcggtgct gaagcatgtc agtgaggtgt caccgcaaac tatggtcgtt
      361 ctcatgaccg cccacgcatc ggtggagacc gccatcgagg cgatccgtgc cggcgcccaa
      421 gattacctgc tcaagccatt ggtcttcgcc gatgtcctgc gcaagattca aaacctcatg
      481 agccatcggc agctagcttg ggagaaccag ctgctcaggc gcgaagtcag cggccatttc
      541 gcgccggacc ggccgctcgg gcgcagcttg gcgatgcaag agatcgtcaa gatgatcatg
      601 aaggtggcgc cgacgccgac cacggtgttg atcagcggcg agagcggcgt cggcaaggaa
      661 gtcgtcgccc gcaccatcca tggcaacagt ccggccaaag acaatgtctt tctgccggtg
      721 aactgtagcg cgatcccgga gaatttattg gagagccaac tcttcggcca cctgaagggc
      781 tcctttaccg gcgcggtcaa ttcccaagaa ggtttgtttc agcgcgcccg gggcgggacg
      841 atttttctcg acgagatcgg cgagatgccg atgagcttgc agccgaaact cttgcgcgtc
      901 ctggaagaaa aaaccgtctt gccggtgggc tcgaccaatc cggtgaaagt caacgtgcgc
      961 atcctggccg cctccaaccg cgacttgaaa gcggaagtcg aggcgggccg ctttcgcgaa
     1021 gatctttact accggctctg tgtttttgaa atcgacatcc cgccgctgcg taaacggctg
     1081 gaagatctgc cggcgctggt cgagcatctg attcaccgcc ataacctgga gatgaaaacc
     1141 gcctacaaag gcgtcgacag cgcgaccatg cgcatactca tgtcgctgcc gtggaagggc
     1201 aacatccgcg aactcgataa cgtgctcgag cgcgcgatga ttctcggcaa cggcgaatgg
     1261 atcgcgccag cggatctgcc cggccacagt tccgcggctg ccgacggcga ctatcgattg
     1321 gaagataact tgactaaagc gatcgaactc tacgaaaaaa cccatatcga acgaacactc
     1381 ggcaagaccg ccggcgacaa gattcgcgag gcggaattgt tggggctaag cctgtcgacg
     1441 ctctaccgca agatcgagaa gttggaaatc gaagggtagc gcgcggctcg cgccgcggct
     1501 tcatatcgct ccaaccgttc aagtcgctga attaatggtc gtgtcatgcc ggcgaaggcc
     1561 ggcatctagg ttcgatttag gttccatgac aagagactgg attccggcct gcgccggaat
     1621 gacgaaagga agagtcgact tctagtcgac ggatccagaa cttctcggct tgagccgggg
     1681 ccgttcaatt tcgatcgatc tcccgccgcc tcattttttt ctcaatccta acaggcgtcg
     1741 ccgggtaaat tcccggtagt gcgaagcgcg ccgatcctgc tgccattttg cattagtatt
     1801 tcaccatgcg gcctcggtct gggtggca
//
LOCUS       DATIRS010000562         2211 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_533488, whole genome shotgun sequence.
ACCESSION   DATIRS010000562 DATIRS010000000
VERSION     DATIRS010000562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2211
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_533488"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..661
                     /locus_tag="VLM90_07105"
     CDS             <1..661
                     /locus_tag="VLM90_07105"
                     /inference="COORDINATES: protein motif:HMM:NF017743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HSQ12767.1"
                     /translation="EELCGQLVGTANESINGVIVHAGDWRKTWGTPSITVALQDDLAL
                     KLDADTFSQVNAEANRLMLAELLNAGAFDKQDRVLELYSGAGNFTLPIANKVGEITAV
                     EGFRNAVASAKLNGQRNGLDNIHWICAPVPRAVAQLKQQRQKYSKIVLDPPRTGAKGI
                     AADLSALGAATISYISCNPTTLARDLAALNKLGYKLRFVQPVDFFPHTFHVESLAIMT
                     R"
     gene            676..1659
                     /locus_tag="VLM90_07110"
     CDS             676..1659
                     /locus_tag="VLM90_07110"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12768.1"
                     /translation="MKILVTGMTLFALCLGDESARAAAAPDRLVGLHSAQVMSQSMPW
                     IAREAGLFKKYDLDFNLVFIPSSPVATAATISGDAEIGVTGAVGNVRAIVQGTNDLVF
                     IGGMKNFLTHSIMGKADIKSPQDLKGKKVAVGRFGGNTHYFVIQALRRLGMDASKDIQ
                     TIQTGGGPETVASLLGGNVDAAGLVAPGDFQVDSRGYRYVVNGFDLKIPYAATCVVTL
                     RSLINKRGPVISRFMRAMAEASKLMHSDRALVYKVLGKYLRITDPKVLDASYNSEIAA
                     MEHRLEIHEAALQASLDEIAPLDARAKAIKPADMIDRRYLAELEKSGVFAK"
     gene            1689..>2211
                     /locus_tag="VLM90_07115"
     CDS             1689..>2211
                     /locus_tag="VLM90_07115"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12769.1"
                     /translation="MPDRAIDIHHHYVPQQLIEETQKHGKALGVEVRQDRGSWSLSFT
                     GSKPHRLQPPIFDVEKHIEIMDQGQVGLATLEANTNSLGYRLNGSQGEACCNLYNDCT
                     QLLAKQRPDRFIGMAVVPLQDATRAARVLEHAIVDLKFAGAFIGTNVNGQYYNVTDFD
                     PFWAKAQELDIMIV"
BASE COUNT          499 a          697 c          614 g          401 t
ORIGIN      
        1 tgaggaactt tgcggccagc tggtcggaac agcgaacgaa tctatcaatg gggtcatcgt
       61 tcatgccggc gactggcgca aaacctgggg cacaccctcg atcacggtgg cgctgcaaga
      121 cgacctagcg ctcaaactcg acgccgacac cttcagccag gtcaacgccg aggccaatcg
      181 gctgatgctc gccgaactcc tgaacgccgg cgccttcgac aagcaggatc gcgtcttgga
      241 actctactcc ggcgctggga atttcacctt gccaatcgcc aataaagtag gcgaaattac
      301 cgctgtggaa ggatttcgta acgccgtcgc cagcgccaag ctcaatggcc agagaaacgg
      361 cctcgacaat atacattgga tatgcgcccc ggtgccgcgg gcggtcgcgc aactcaaaca
      421 gcagcgccaa aagtattcca agatcgttct cgatccaccc cgcaccggcg ccaagggaat
      481 tgccgccgac ctcagcgccc tgggcgcggc gacgatcagc tatatctcgt gcaatccgac
      541 gaccctcgcg cgcgacctgg ccgcgctgaa caagcttggc tacaagctcc gattcgtcca
      601 accggttgac tttttccccc acaccttcca tgtagaatcg ttagccataa tgacacgctg
      661 aggaggacga ctatgatgaa aatactagtg accggtatga cacttttcgc cctttgcttg
      721 ggtgacgaat cggcaagggc agcggcggcg ccggaccggc tcgtcggtct gcactcggcc
      781 caggtgatgt cccagtcaat gccgtggatc gcccgggaag ccggcctgtt caagaaatac
      841 gatctcgact tcaatttggt tttcattccc tcatcgccgg tcgccaccgc cgcgaccatc
      901 agcggcgacg cagagatcgg cgtcaccggc gccgtcggca acgtccgcgc catcgtccaa
      961 ggcaccaacg atcttgtttt catcggcggc atgaagaact ttctgaccca tagcatcatg
     1021 ggcaaggcgg acatcaagag cccgcaagat ctcaaaggca agaaagttgc cgtcggccgt
     1081 ttcggcggca acacccacta ttttgtcatt caggcgctgc gccgcttggg catggatgcg
     1141 agcaaggata tccaaacgat ccagaccggc ggcggaccgg agaccgtggc atcgctcctc
     1201 ggcggcaacg tcgacgccgc cggcctagtg gcgcccggcg atttccaggt cgactcgcgc
     1261 ggctaccgct acgtcgtcaa cggtttcgat ctcaagattc cctacgcggc cacctgcgtc
     1321 gtcaccctgc gctcgctgat caacaaacgc ggcccggtca tcagccgctt catgcgcgcc
     1381 atggccgaag caagcaaatt gatgcacagc gaccgcgcgc tggtttataa ggtgctcggc
     1441 aaatatctgc gcatcaccga cccgaaggtt ctcgacgcat cctacaattc cgagatcgcc
     1501 gccatggagc accggctgga aatccacgaa gccgcgctgc aagcttcgct cgacgagatc
     1561 gcgcccctcg acgcgcgcgc caaagcgatc aaacccgctg acatgatcga ccggcgttat
     1621 ctggccgaat tggaaaagag cggggtgttt gcaaaataag cgcgatgcga gaggcagcgt
     1681 agagttcaat gccagacaga gccatcgaca ttcaccacca ttacgtgccg cagcagctga
     1741 tcgaggaaac tcagaagcac ggcaaggccc tcggcgtcga ggttcggcag gacagaggca
     1801 gttggtcgct ttcattcacc ggcagcaagc cgcaccgttt gcagccgccg atcttcgatg
     1861 tcgaaaagca tatcgaaata atggatcaag gccaggtcgg tttggcaacc ctcgaagcca
     1921 acaccaacag cttgggctat cgattgaacg gcagccaagg cgaggcctgc tgtaatctct
     1981 acaacgattg cacccagctg ttggcaaaac agcggccgga tcgcttcatc ggcatggcgg
     2041 tggtgccgct gcaagacgcc acccgggcgg caagagtatt ggagcacgcc atcgtcgatc
     2101 tgaaatttgc cggcgctttt atcggcacca acgtcaacgg ccagtattac aacgtcaccg
     2161 acttcgatcc gttctgggcc aaggctcaag agctcgacat catgatcgtc a
//
LOCUS       DATIRS010000563         1504 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1714380, whole genome shotgun sequence.
ACCESSION   DATIRS010000563 DATIRS010000000
VERSION     DATIRS010000563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1714380"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..411
                     /locus_tag="VLM90_07120"
     CDS             <1..411
                     /locus_tag="VLM90_07120"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HSQ12770.1"
                     /translation="FAQVNDFHKWEGWSPWAKIDRNMKTIYEGAPAGTGAVYSWAGNN
                     DVGEGRMTLTESRPSELVRIKLEFKKPFEATNTTEFNFKPEADKTLVTWSMAGENNFM
                     AKAFGLVMNMDKMVGGDFEKGLAQLKSVTETTGK"
     gene            481..846
                     /locus_tag="VLM90_07125"
     CDS             481..846
                     /locus_tag="VLM90_07125"
                     /inference="COORDINATES: protein motif:HMM:NF024953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HSQ12771.1"
                     /translation="MNIALWITQGLLAALFLFAGGMKLITPIEEMTKEIAMPGGFLRF
                     IGVAEMLGAIGLILPWLLKIRPGLTPLAAAGLAIIMIGAVVVTLIFSDPVTALLPLAT
                     GMLCVFVAYGRSRLTAFPR"
     gene            complement(827..>1504)
                     /locus_tag="VLM90_07130"
     CDS             complement(827..>1504)
                     /locus_tag="VLM90_07130"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSQ12772.1"
                     /translation="KRIGVYLQKEERGQPVTPRGTPTYSFTTTKHGIEEVMDVLANWK
                     IPFEGPQKNTHPFAITTLFFADPAGNNFAVYVPSIDGQSAAATAQRLTGVGYLELEAP
                     KLDESIKFYQAVLGFELLNRGLDIKTNRNQAAMRMASGQYLILTESAFRPKGYPMSRK
                     IPGPHLGFYVAPAQWRDALAQLDRLGIPNGDRGEEAKGRHPGGTAGTYMDDPAGYVIQ
                     YISEGMQ"
BASE COUNT          325 a          429 c          434 g          316 t
ORIGIN      
        1 ttcgcgcagg tcaacgactt tcataaatgg gaaggctggt cgccctgggc gaagatcgat
       61 cggaacatga agacaattta tgaaggcgcg ccggccggaa ccggtgcggt ctactcgtgg
      121 gccggcaata acgatgtcgg cgaagggcgc atgacactga cggagagccg acccagcgag
      181 ctcgtgcgta tcaagctcga attcaagaaa ccatttgagg cgaccaacac cactgagttt
      241 aacttcaaac ccgaagccga caagaccctg gtcacctgga gtatggcagg tgaaaacaat
      301 ttcatggcca aggctttcgg cctagtcatg aacatggata aaatggtcgg cggcgatttc
      361 gagaaaggcc tggcgcaatt gaagtcagtg acggaaacaa ccggcaaata atcaccgctc
      421 aacggatcgt gccatgcagc aacccctgac agaggacagc cgccacaaag gaaacccatc
      481 atgaacattg cactgtggat tacccaagga ttgctcgccg cgctctttct attcgccggc
      541 ggcatgaagc tgatcacccc catcgaggaa atgaccaagg agattgccat gccaggcggg
      601 tttctccgct tcattggcgt agcggaaatg ctcggcgcca tcggtttgat actcccatgg
      661 ctgctaaaga ttcgccccgg gctcacgccc ctcgccgccg ccggtttagc catcataatg
      721 atcggcgccg ttgtggtgac cttgatcttc agtgatcccg taacggcgct gttgccgctc
      781 gcgaccggca tgctctgcgt attcgtcgct tacggccgca gccgcctcac tgcattccct
      841 cgctgatata ctgaatcacg tagcccgctg gatcgtccat atacgttccg gcggtgccgc
      901 cggggtggcg gcctttggct tcttcgccgc ggtcgccgtt cggaatgccg agacggtcga
      961 gctgggcgag cgcgtcgcgc cattgagccg gcgcgacgta aaagccaaga tggggtccag
     1021 ggatcttgcg gctcatcgga tagcccttcg ggcggaaagc cgattccgtg agaatcaagt
     1081 attgaccgct agccatgcgc atggctgctt ggttgcgatt ggtcttaata tccagtccac
     1141 ggttgagcag ttcgaaaccc aacaccgcct ggtaaaattt gatcgactcg tcgagcttgg
     1201 gcgcctccaa ctccaggtag ccgacgccgg tgagccgttg agccgttgcg gctgcgctct
     1261 ggccatcgat gctcggcaca taaaccgcga aattgttacc cgcgggatcg gcaaaaaaca
     1321 gcgtcgtaat ggcgaatgga tgggtgtttt tttgcggccc ctcgaaaggg atcttccaat
     1381 tcgccagcac atccatcacc tcttcgatgc catgcttggt ggtggtaaac gaataggtcg
     1441 gtgtgccgcg cggggtgacc ggttggccgc gctcttcttt ttgcagataa acaccaatgc
     1501 gttt
//
LOCUS       DATIRS010000564         2142 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_337582, whole genome shotgun sequence.
ACCESSION   DATIRS010000564 DATIRS010000000
VERSION     DATIRS010000564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2142
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_337582"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..685)
                     /locus_tag="VLM90_07135"
     CDS             complement(<1..685)
                     /locus_tag="VLM90_07135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12773.1"
                     /translation="MALRFTGLFKRSKVQPFKVLGFLILSVVALLNPLNLERASAQTP
                     YYSGKTIRVFVGYQPGDTHDLWARMYTRYMGKYLPGNPTFVVQNMPGAGGMIAANHVF
                     NLTKPDGLTLATIGGALYFNQLIGRAEVRFDWNRFTWIGTPEPAGLLVYMRTDAPYKT
                     LDDLRQTNDPPKCSATGLGSAGYDLPRLLEDVLGLKFKVISGYPGGADQDLAMERGEV
                     HCRAFTIEAF"
     gene            complement(705..1712)
                     /locus_tag="VLM90_07140"
     CDS             complement(705..1712)
                     /locus_tag="VLM90_07140"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ12774.1"
                     /translation="MSPLNLEPAAAQTPPFYQGKTIRIIVGNLPGDTHDIFARAYSRH
                     MGKHIPGFPNILVQNMPGAGGMIAANHVYNVAKPDGLTLGSPSPALYYAQLIGSSQAK
                     FDWPKFNFIGAPERNGHLLFMRADSPYKTLDDIRKAKEPPKCAATGVGTSGHDVPKLF
                     AEMIGLKFNLITGYPGGAEMDIAIERGEAICRAITIAAFFAREPFQSWYKTGVVRVML
                     QTSRQRNPRIPDVPTLFELMEQYKTPEIKRRQVLTYLGVGGFGAWPILATPGIPAERV
                     AILRDGFGKTMKDADFLGEAKKAGWEIRPTNGETLQALAKEVIEQPPEVVDWLKKLLN
                     K"
     gene            complement(1830..>2142)
                     /locus_tag="VLM90_07145"
     CDS             complement(1830..>2142)
                     /locus_tag="VLM90_07145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12775.1"
                     /translation="PTMYELMDRYKTTEPVRKLAKVILIASDLGRPIVAPTGVPAERL
                     KIIRDAFNKSVSDPAFLAEAEKRRLEIDPSTWDELEPLAKEAMATPADVIERMKKVLG
                     M"
BASE COUNT          442 a          580 c          645 g          475 t
ORIGIN      
        1 aaaaggcttc gatggtaaaa gcccggcagt ggacttcgcc ccgttccatg gcgagatcct
       61 ggtcggcgcc gccgggatag ccgctgatga ctttgaattt aagccctaag acatcttcga
      121 gcaaccgcgg caagtcatag ccggcgctgc ccaagccggt ggcggaacat ttcggcggat
      181 cgttggtctg gcgcaggtcg tccaaggtct tatacggcgc gtcggtgcgc atgtagacca
      241 gcaggccggc gggctcgggc gtgccgatcc aagtgaacct gttccagtca aatctaactt
      301 ccgcacggcc gatcaactga ttgaagtaaa gcgcgccgcc gatagtggca agcgtcaggc
      361 cgtcgggctt ggtcagattg aaaacatgat tggcggcgat catgccgccg gctccaggca
      421 tgttctgcac cacaaaggtc ggattgccgg gcaagtattt gcccatgtag cgcgtgtaca
      481 tgcgcgccca tagatcatgg gtgtcccccg gctgataacc gacgaagacg cggatggttt
      541 tacccgaata ataaggcgtc tgggcagacg cccgttcaag gttcaaaggg ttcaaaagtg
      601 caacgacaga taagatcaga aatccgagaa ccttgaacgg ttgaaccttt gaacgtttga
      661 acagcccggt aaatcgaagt gccatggaga ttctcattgt caggttattt gttgagtaat
      721 tttttcagcc aatcgaccac ttccggcggt tgttcgatga cttctttggc gagggcctgc
      781 aaggtttcgc cgttcgtcgg acggatttcc cagccggctt ttttcgcctc gccgaggaag
      841 tcggcatctt tcatggtctt gccgaagccg tcgcggagga tcgccacgcg ctcggccggg
      901 attcctggtg tcgcgaggat gggccaggcg ccgaaaccgc caacgccgag ataggtcagc
      961 acttggcggc gcttgatctc cggggtcttg tattgctcca tcagctcgaa caaggtcggc
     1021 acgtcgggga ttcttgggtt acgctgacgc gaggtttgca acatgacgcg cacgacaccg
     1081 gtcttatacc agctctgaaa gggctcgcgg gcgaagaacg ccgcgatcgt gatggcacgg
     1141 caaatcgctt cgccgcgttc gatggctata tccatctccg cgccgccggg ataaccggtg
     1201 atcaggttga acttcaagcc gatcatctcg gcaaacagct tgggcacgtc gtggccgctg
     1261 gtgccgactc cggtggcggc gcatttgggc ggctccttgg ctttgcggat atcgtcgagc
     1321 gtcttatagg gcgagtccgc gcgcatgaac aacaaatggc cgttgcgctc cggcgcgccg
     1381 atgaaattga atttgggcca atcgaatttg gcttggctgc tgccgatcag ctgggcgtaa
     1441 tacaacgccg gcgacggcga accgagcgtc agtccatccg gcttggcaac gttgtagaca
     1501 tgattggccg cgatcatgcc gccggcgccg ggcatgttct gcaccaggat attcgggaag
     1561 ccgggaatat gtttgcccat gtgacgcgag taagcgcggg caaatatgtc atgggtatcg
     1621 ccgggcagat tgccgacgat gatacgaata gtcttgcctt gataaaaagg cggcgtctgt
     1681 gccgccgccg gttcaaggtt caaagggctc aaaacttcaa gggttagaat aaaaaaggcg
     1741 aaaagagtcg gattgaaccc ttgaaccctt gaacttttga acgagtattt tcttcgatgc
     1801 gtcatgcaaa acctcacact tgattgcggt tacatgccca agactttttt catgcgttca
     1861 atcacatcgg ctggcgtcgc catggcttcc ttggccaagg gttcgagctc atcccaagtc
     1921 gatggatcga tttccaacct gcgcttttcc gcctcggcta agaatgccgg gtcgcttacc
     1981 gacttgttaa aggcgtcgcg gatgattttc aagcgctcgg ccggcacgcc cgtcggtgcg
     2041 acgatgggcc ggcccaggtc gctggcgatc aagataacct tggcgagctt gcgcaccggc
     2101 tcggtggttt tgtagcggtc catcaattcg tacatggtcg gc
//
LOCUS       DATIRS010000565         2345 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_829337, whole genome shotgun sequence.
ACCESSION   DATIRS010000565 DATIRS010000000
VERSION     DATIRS010000565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2345
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_829337"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..318)
                     /locus_tag="VLM90_07150"
     CDS             complement(<1..318)
                     /locus_tag="VLM90_07150"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF021535.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HSQ12776.1"
                     /translation="MTSLLAGCSPAYFLRAAYEEGKILWRREPIADFIRKPDVAADTQ
                     EKMQLVLAVREYARDVLKFNVGGSYSSYSRVDRPDLTYIVLAAPKTEMVPYTWWFLIV
                     GSVP"
     gene            complement(419..2236)
                     /locus_tag="VLM90_07155"
     CDS             complement(419..2236)
                     /locus_tag="VLM90_07155"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ12777.1"
                     /translation="MAQAEQQEEILGKAYDYRLVKRLWQFIIPYKRLFFLSMLLLPLQ
                     QAFGLAQPYLMKIGIDQFIAGKDLWGLQGVMLLFLGALIGETLAVFAQYYFSMLVAQR
                     CLADLRVAVFAHVQKLPMSYFDRNPVGRLVTRMTTDVDVLQEMFSSGVVTLVSDFIMV
                     IWIVGIMFYLHVELALVSLALIPLMAIAINFFRVKARQTYRQIRERIARINAYLGEAI
                     SGMAVIQLFAREEKTYREFEDLNADHRDAYHMSNLYEAALYSMVEAAGSVSVGLLLWY
                     GGGEVLHGGIGIGTLVAFKEYLHRFFVPLRDFSQKYAVMQSAMASAERIFQLLDTPVD
                     IQSPKNPVVPKPFRGEVVFDHVWFEYKAGDPVLRGVSFRIEPGEKIAVVGATGSGKTT
                     TIKLLNRFYDIQKGSIKVGGVDVREWDLKALRQHIGVVLQDVFLFSGDVRANLALGDP
                     TVPMDRIEKAAQAANADIFIRRLPEVYSAPVRERGSNFSGGQRQLLALARVLVFQPEI
                     LVMDEATSSVDTETEALIQDALEKAMRGRTCLLIAHRLSTIRNSDRIIVLHHGEVREV
                     GSHAELMEKQGIYHRLYQLQYEREELKLAAPESIIKAHG"
BASE COUNT          511 a          707 c          666 g          461 t
ORIGIN      
        1 gggcacgctg ccgacgatca gaaaccacca cgtgtacggc accatctcag tcttgggcgc
       61 ggccaggacg atataagtca agtccggccg gtcgacgcgg gaatagctgg agtagctgcc
      121 gccgacattg aatttgagaa cgtcgcgcgc atactcacgc accgccagga ccaactgcat
      181 tttttcctga gtgtcggccg cgacatcggg tttccggatg aagtccgcga tgggctcgcg
      241 ccgccagaga atcttccctt cctcgtaggc cgcgcgcaga aagtaagcgg gcgaacagcc
      301 ggcaagcagc gaagtcatga ccgcgccaac cagtacaagc gctaaagttt gacgaagtct
      361 cactcgactt agacgaaggt ttcgcggcaa tagagccaac agattcttgc cgccatgact
      421 acccatgagc cttgattatc gactccggcg cagccagttt caactcttcg cgctcgtact
      481 ggagctggta caggcggtgg tagataccct gcttttccat cagctcggcg tgggagccca
      541 cctcgcgcac ttcgccgtga tggagcacga tgatccggtc ggagttacgg atggtggaca
      601 gccgatgcgc gatcaacaga caagtgcgcc cgcgcatggc tttttccaag gcgtcctgaa
      661 taagcgcctc agtctcggta tcgacgctgg acgtcgcctc gtccatgacc aggatttccg
      721 gttgaaagac cagcacccgc gccagtgcca ggagctggcg ctgcccgccg gaaaagttgc
      781 tgccgcgctc gcgcaccgga gcgctgtaaa cttcagggag gcggcgaatg aaaatgtctg
      841 cgttggccgc ttgggccgcc ttttcgattc tatccatcgg caccgtggga tcgcccagcg
      901 ctagattggc gcgcacgtcg ccggagaaca gaaagacgtc ttgcaaaacg acgccaatgt
      961 gttggcggag cgcttttaaa tcccactcgc gcacatcgac accgccgact tttatcgagc
     1021 ccttttgaat atcgtaaaag cggttgagga gtttgatcgt cgtcgtcttg cccgagccgg
     1081 tggcgccgac gacggcaatt ttttcccccg gctcgatgcg aaacgacacg cccctcaata
     1141 ccggatcgcc ggccttgtac tcgaaccaga cgtggtcgaa caccacttcg ccgcggaacg
     1201 gcttgggcac gaccggattt ttcgggcttt ggatatccac cggcgtgtcg agcagttgaa
     1261 agattcgttc cgccgaagcc atcgccgatt gcatcaccgc gtatttttgg ctgaaatcgc
     1321 gcagcggcac gaagaagcgg tgcagatact ctttgaaggc caccaacgtg ccgatgccga
     1381 tcccaccgtg cagcacctcg ccgccgccgt accacagcaa caacccgacg ctcaccgagc
     1441 cggcggcctc gaccatggag tagagcgccg cttcgtaaag attcgacata tgataagcgt
     1501 cacggtggtc ggcgttgaga tcttcgaact cgcggtaggt tttctcctcg cgcgcgaata
     1561 gttgaatgac ggccatgccc gagatcgctt cgcctagata agcgttaatg cgcgcaatgc
     1621 gctcgcggat ttggcgatag gtctggcgcg ccttgacccg gaaaaagttg atggcgatcg
     1681 ccattagcgg aatcagcgcc agcgatacca aggccagttc cacgtggaga taaaacatga
     1741 tgccgacgat ccagatgacc ataatgaagt cgctcaccag ggtcactacg ccggaagaaa
     1801 acatctcttg cagcacgtcc acgtccgtgg tcatgcgcgt caccagccgg ccgacgggat
     1861 tgcggtcgaa gtagctcatc ggcagctttt gcacgtgggc gaagaccgcc acgcgcaggt
     1921 ccgcgaggca gcgctgcgcc accagcatgg aaaaataata ctgcgcgaac acagcgagcg
     1981 tttcgccaat cagcgccccc aagaaaagca gcatgacgcc ttgcaggccc caaagatcct
     2041 tgccggcgat gaattgatcg atgccgattt tcatcagata gggctgcgcc aagccgaagg
     2101 cttgctgtag cggcaacagc agcatgctca aaaaaaacag ccgcttgtac ggaatgataa
     2161 actgccacag ccgcttgacg agccggtagt cgtaagcctt gccgagaatt tcttcttgct
     2221 gctctgcttg cgccatttaa atctgttcca gctcctcgct caggcgctgc tgctgataga
     2281 gctcggcgta gacgccgccg cgttgcacca gttcgtcatg gttaccgcgt tcgataatct
     2341 tgcct
//
LOCUS       DATIRS010000566         1642 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1026241, whole genome shotgun sequence.
ACCESSION   DATIRS010000566 DATIRS010000000
VERSION     DATIRS010000566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1642
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1026241"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..365)
                     /locus_tag="VLM90_07160"
     CDS             complement(<1..365)
                     /locus_tag="VLM90_07160"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ12778.1"
                     /translation="MITGGGGGIGGAVAQRMAVAGIAVVIADYDGGAAERVKGEIAAA
                     GGKADALAIDVTVAREVKAVVTDVAKRYGRVDILANIAGGSRYTKRVEEFTWAQWKEV
                     IDANLKGTFLMCREVAPIM"
     gene            complement(377..1567)
                     /locus_tag="VLM90_07165"
                     /pseudo
     CDS             complement(377..1567)
                     /locus_tag="VLM90_07165"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
BASE COUNT          306 a          540 c          468 g          328 t
ORIGIN      
        1 tgcatgatcg gcgccacttc gcggcacatg agaaacgtcc ctttcaaatt ggcgtcgatc
       61 acctctttcc actgagccca ggtgaactct tcgactcgtt tcgtgtaacg gctgccgccg
      121 gcgatgttcg cgagaatatc aacgcgcccg taacgcttgg cgacatcggt gaccaccgct
      181 ttgacttcac gcgccaccgt gacgtcgatc gccagggcat cggccttgcc gccggccgcg
      241 gcgatctcgc ccttgacccg ctccgccgcg ccgccgtcgt aatcggcgat gacgacggca
      301 atccctgcca cggccatgcg ctgcgccacc gcgccgccga tgccgccgcc cccgcccgta
      361 atcaaagcta cctgactcaa tgtaatcctc ctgctggcgg cgcataaata gcgtcgatct
      421 gttgccaaaa gcgcgccgcg acctgctcgc gattcacttt gaccttgtga aaatggttga
      481 tgcttcggac ttcggcggga aattcgctgg gcatgacggc gatccggcaa atccgttcgt
      541 aagcttccag ccggccattg acccgctcga tctgcgacca caaggcagcg ctgatttccg
      601 cgtccgacac agctgctata tcacgatcga gagattcggc aatcgctctg cgatcgggaa
      661 agatcaaagc cgctatgaac ggctggcgat cgcccagcaa caccgcctgg ctgataaacg
      721 gctcgttttc cagctgtagt tcgataaaac cgggataaat gttcgagccg tcggcgcaat
      781 tgaagacatc tttcttccgg ccggtgatgc gcagcgatcc gtcggcttcg agcacaccta
      841 aatcgcctgt acgataccag ccctcctcgt cgaacgcctc ggcggtcgct gcgggatttt
      901 taaagtagcc cggcgacacg gtcggcccgc gcacgagaat ctcgccgtcg tcggcgatgc
      961 gaatttgcac gttggcaaac ggcttgccta gattgcccgg ccggttctcg ccgataccgc
     1021 agagggtcac gccgccgcat tcggtggaac cgtaggagcc gatcagcggg atgccgatca
     1081 actcgaaaaa gcgcatgatc cgcggcggca tggccgcgcc gccgtaagca atgtatttga
     1141 tccggccgcc gagggcgcgc cggacactcg ccttgagttg ggcttgcaat tcctcgaaac
     1201 gtctggcttt gcgatcgtcg aagtcgctgc ccggcttctt gccgtcgaga ctttcgagtt
     1261 cttgccacaa ttgccgcgcg cggtcccgag ccaacacgca attccagatc cgctccatca
     1321 tccgcggcac cacggccaat gccgtcggcg ccagctgctc gatcaccggc aaatccactt
     1381 tggtctccgc cgcctcgacg agcgccgtgg ttcggccggt caccgcgctt ttgagaaagc
     1441 cgaagcggcc gaacagatgg ttcaaactga gcacgttaac cgtgagttcg tccgggctgc
     1501 tgacggtaat cgcgccgccg ttggtgatat tggcgagcaa gttgtcttgg gtgcgcatga
     1561 ctcccttggg ctcgccggtc taaccggagg tgtacatgat cgtcgccaag tcgcggccat
     1621 gcaccgcttc gacaagcgca gc
//
LOCUS       DATIRS010000567         2017 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_533803, whole genome shotgun sequence.
ACCESSION   DATIRS010000567 DATIRS010000000
VERSION     DATIRS010000567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2017
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_533803"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1978)
                     /locus_tag="VLM90_07170"
     CDS             complement(<1..1978)
                     /locus_tag="VLM90_07170"
                     /inference="COORDINATES: protein motif:HMM:NF024754.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HSQ12779.1"
                     /translation="MEPGKLFVVGDPKQSIYAFRRADIEAYLEVVEKIVMAQDGIECR
                     LTTNFRSDGAILDVVNGAFEQLIQPREALQPPYIAIQPAPGRASLPGSLAKLSVRKII
                     APQDEKDQMEKTDAETARRIEGESLARWLKESVLGKAQILNPHGETVYAQPKDVAILM
                     RKLTDVHDYLEPFRRQGIRYVVEGERHFYAAKEIIDAVNLLRAVENPYDRLALVGVLR
                     SPLGGLTDLQIYQLHRQNRLDYRDSTNLAADDFPATLVQLYQALTRLNVETRTLTIGT
                     AVDRIFSTLPVELLAACYFHGEQAVANLAKLRRQAEQLGREGLTTLKQAIRQLEQRVL
                     DVKDEGESVLAEENLDAVRIMSIHKAKGLEFPIVILAGCQTGTEGRHNAEAESTFDWS
                     TGLTGLRIGQTADLAGLYIAEKNRLRNAEEQKRLLYVAMTRAREHLVISCAPANRRSG
                     GSFQAMLDTTLNDRIAAAESSTRVALGKGMVDIEVVHQNLIAPSHAPAKAKRSKKKPN
                     WKPYVDNWARRTAIYEKAQQSTPFLTPTLLKRQEEASTEAGDKITIQAPRKTPALMVG
                     DLTHRFLQTWQFGSDTTNLGEQLRSFVDSALSAEFASARAEIETELNEILANYFRSKV
                     YGELAGAKILGREVPLIMPWQDQIMEGVIDLIYEK"
BASE COUNT          333 a          545 c          655 g          484 t
ORIGIN      
        1 ttttctcgta gatgagatcg atgacgcctt ccatgatctg atcctgccag ggcatgatca
       61 gcggcacttc gcggccgagg attttggcgc cggcgagttc gccgtagact tttgagcgga
      121 aataattagc caaaatttcg ttcagctcgg tttcgatctc ggcgcgggcg gaagcgaact
      181 cggcggacag agcgctgtcg acgaagcttc gcaattgctc accgagattg gttgtatcac
      241 tgccgaactg ccaagtttgc aaaaatctgt gcgtcagatc gccgaccatc agtgccggcg
      301 tctttcgcgg tgcttggatg gtgatcttat cgccggcctc ggtgctcgct tcctcttggc
      361 gcttcagcag cgtcggggtg agaaagggcg tgctctgttg cgccttttca tagatcgccg
      421 tccggcgcgc ccagttgtcg acgtagggtt tccagttggg ctttttcttc gagcgtttgg
      481 ctttggccgg cgcgtggctc ggcgcaatta aattttgatg gacgacttcg atatcgacca
      541 tgcctttgcc gagggcgacg cgagtggaag attcggcggc ggctattctg tcgttgagcg
      601 tcgtgtcgag catggcttga aagctccctc cggagcggcg gttggcgggg gcgcaagaga
      661 ttaccagatg ttcgcgcgct ctagtcatgg cgacgtagag cagccgtttt tgttcttcgg
      721 catttctcaa gcggtttttc tcggcgatgt agaggccggc gaggtcggcg gtctggccga
      781 tgcgcaggcc ggtgagaccg gtggaccaat cgaatgtcga ctcggcctcg gcgttatggc
      841 gcccttcggt gccggtctgg cagccggcca ggatgacgat ggggaactcc aaccctttgg
      901 ccttgtggat gctcatgatg cgcacggcgt ctaagttttc ttcggcgagc acgctttcgc
      961 cttcgtcctt gacgtcgagg acgcgctgtt cgagctggcg gatcgcttgc ttgagcgtgg
     1021 tcaatccctc gcggcccagc tgttcggctt gccggcgcag cttggctaag ttggccaccg
     1081 cctgttcgcc gtggaaataa caggcggcga gcagttccac cggcagggtt gaaaatattc
     1141 gatcgacggc ggtcccgata gtgagtgtgc gggtttccac gttgagtcgg gtcagcgcct
     1201 gatagagctg caccagcgtt gctggaaaat catcggcagc gaggttggtg ctgtcgcgat
     1261 agtcgagccg gttttgccgg tgcagctggt aaatctgcaa gtcggtgagc ccgcccaagg
     1321 gcgaacgcag cacgccgacc agtgccaagc ggtcgtaggg gttctccaca gcgcgcagta
     1381 gattgaccgc gtcgatgatt tctttggcgg cgtagaagtg gcgctcgcct tcgaccacgt
     1441 agcggatgcc ctggcggcga aacggttcca ggtagtcgtg gacgtcggtc agcttgcgca
     1501 tcaggatggc gacgtctttg ggctgggcgt agacggtctc gccgtgcggg ttgagaatct
     1561 gcgctttacc caacacagac tctttcaacc agcgcgccaa gctctcgcct tcgatgcgcc
     1621 gggcggtttc ggcatcggtc ttctccatct ggtctttctc atcttggggg gcaatgattt
     1681 tcctgacgga tagttttgcc agcgagccag gtaaacttgc gcggccgggc gcgggttgga
     1741 tggcgatata gggcggctgt aacgcctctc tgggttggat caattgttca aaggcgccgt
     1801 tgacgacgtc gaggatcgcg ccgtcgctgc ggaagttggt ggtgagccgg cattcgatgc
     1861 cgtcctgtgc catgacaatt ttctcgacca cttccaaata ggcttcgatg tcggcgcggc
     1921 ggaaagcata gatcgattgt ttcggatcgc cgaccacgaa tagtttgccg ggttccaatc
     1981 tgactttgcg ccaccccgac acgctctgat tcggctg
//
LOCUS       DATIRS010000568         1636 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1616000, whole genome shotgun sequence.
ACCESSION   DATIRS010000568 DATIRS010000000
VERSION     DATIRS010000568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1636
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1616000"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1401)
                     /locus_tag="VLM90_07175"
     CDS             complement(<1..1401)
                     /locus_tag="VLM90_07175"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HSQ12780.1"
                     /translation="MSKPAESVNEVKEVRGYCALCTAHCATIATVENGRVTKLEPDHD
                     HPNGGVMCVKGKAAPELVYNSDRLNYPLKRTRPKTDADPGWQRVSWDEALDDIARRLL
                     SIREQHGAKAMALGKGTKSGTSVDDVERWLGRFLYLYGSPNWVSTTHVCNWHKDTGFS
                     FTFGTTIQTPDVAHSKTFLLWGHNPSSTSLILAHDIVAARQRGMKTVVVDPRRVGIGA
                     NADMLLQVRPGTDGALALALIHCLIEESWYDVEFVRRWTNGMFLLNTATGAVVSEADL
                     SAAGSQNRFVVWDEAKNETVIYDPDSAAYARDPVRPALFGTRILRSKDGNEIICQPVF
                     ERLGEIAAEFAPEKSEKITWVSADQVWKTALLLAHNRPLSMYMWNGVGQHTNATQTSR
                     AIASLYALLGDFDRQGGNVTFPKLPTNNVDGKEFLSKEAAALRIGREKKLLGPPASPG
                     NCAAYDIFTAIIDEQPY"
BASE COUNT          288 a          469 c          527 g          352 t
ORIGIN      
        1 gtagggctgt tcgtcgatga tcgcggtgaa gatatcgtag gcggcgcagt tgcccggcga
       61 cgccggtggg ccgagcagct ttttctcgcg gccgatgcgc agcgccgccg cttctttcga
      121 taaaaattct ttgccgtcga cattgttggt cggcagcttg ggaaaggtca cgttgccgcc
      181 ctggcggtcg aagtcgccaa gcagcgcgta gagcgacgcg atggcgcggc tggtttgggt
      241 cgcattggta tgctggccaa cgccgttcca catgtacatg ctgagcggcc ggttgtgcgc
      301 cagcaagagc gcggttttcc agacttgatc ggcggacacc caggtgattt tttcagattt
      361 ttccggcgcg aattctgccg cgatctcgcc gagccgctcg aagaccggct gacaaataat
      421 ttcattgccg tctttcgagc gcagaatgcg cgtgccgaaa agtgcggggc gcacggggtc
      481 gcgggcgtaa gctgcgctgt caggatcgta aatgacagtt tcattcttcg cttcatccca
      541 aaccacgaag cgattctggc ttccagctgc gctgagatcg gcttcgctga cgaccgcgcc
      601 ggttgccgtg ttcagcaaaa acatgccgtt ggtccagcgg cgcacgaact cgacgtcgta
      661 ccagctctct tcgatgagac agtggatcag cgccaacgcc agggcgccgt cggtgccggg
      721 acggacttgc agcaacatgt cggcgttggc gccgatgccg acgcggcgcg gatcgacgac
      781 cacagttttc atgccgcgct ggcgggccgc gacgatatcg tgggcgagga tcaacgatgt
      841 cgagctcggg ttgtggcccc agagcagaaa agttttgctg tgcgcgacat cgggcgtctg
      901 gatcgtcgtg ccgaaggtaa aactgaagcc ggtgtctttg tgccagttgc agacatgagt
      961 ggtcgagacc cagttggggc tgccgtagag gtaaagaaag cgtcctagcc agcgctcgac
     1021 atcgtccacc gacgtgccgc ttttcgtccc cttgcccagc gccatcgcct tggcgccatg
     1081 ctgctcgcgg atcgataaca atctcctcgc gatgtcgtcg agcgcttcgt cccaactgac
     1141 gcgctgccaa ccgggatcgg cgtcggtctt gggccgggtg cgcttgagcg gataattcaa
     1201 gcggtcggaa ttgtaaacca gctcgggcgc agccttgccc ttgacgcaca tgacgccgcc
     1261 gttgggatga tcgtggtccg gctccaactt cgtcacccgg ccgttttcca cggtggcgat
     1321 ggtggcgcag tgagcggtgc agagggcgca gtagccgcgc acttccttta cttcattgac
     1381 ggactctgct ggtttggaca tttcgttctc cgtttcgagt agcgggctgt gcgcggcggt
     1441 tcaaggttca agggttcaaa tgttcaaggt cggattccgg aagattgaac atttgaacct
     1501 tgaacccttg aacgacattt taatctaact ccggccggtt cggtttgccg atgaagccgg
     1561 ggccaaagcc ggcttcgtgc gccgcccagg cgccggcgac gcggccgctg aagatcgatg
     1621 ggccgagcat ggtgcc
//
LOCUS       DATIRS010000569         2431 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_337829, whole genome shotgun sequence.
ACCESSION   DATIRS010000569 DATIRS010000000
VERSION     DATIRS010000569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2431
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_337829"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            82..987
                     /gene="cyoE"
                     /locus_tag="VLM90_07180"
     CDS             82..987
                     /gene="cyoE"
                     /locus_tag="VLM90_07180"
                     /EC_number="2.5.1.141"
                     /inference="COORDINATES: protein motif:HMM:TIGR01473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008495 - protoheme IX farnesyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme o synthase"
                     /protein_id="HSQ12781.1"
                     /translation="MNSNTGTAALTGAGALRRAADFVELAKPRVVLMVLITTFVGFYL
                     GSEQVPNYLVLAQTLIGTALAAGGTLALNQYMERDTDAVMQRTQRRPLPDGRLQPREA
                     VWFGLAVTVLGLVYLALTVNLLSACVTAFITISYLLFYTPLKRRSSLCMLVGAVPGAL
                     PPVIGWVATRGMLEVDAWVLFAIMFLWQVPHTLAIARLYRDDYAKAGIMFLPVIEPEG
                     GSTNRQIISHSAALLAVSLLPTLLGLAGGIYFTAAFVLGAGFIAAGIAVALNSTLANA
                     RRLLFVSLVYLPVLLLVMALDRVPL"
     gene            984..1109
                     /locus_tag="VLM90_07185"
     CDS             984..1109
                     /locus_tag="VLM90_07185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12782.1"
                     /translation="MNQTMTNPGRTKAAKRGRFGALLAAAVILYIAAVMVFIVVY"
     gene            1132..1785
                     /locus_tag="VLM90_07190"
     CDS             1132..1785
                     /locus_tag="VLM90_07190"
                     /inference="COORDINATES: protein motif:HMM:NF012720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HSQ12783.1"
                     /translation="MTTSSAARKLDDAAPVAPAPRREFAGGGGPPVRPNVPILNNAEL
                     GVIMLLGAELMFFAGLIGAFLVFRLSATVWPPPFQPRLPIGVTGVNTVILLVSALTVH
                     WAVGAARAGAAILRYLAWTALLGALFLLIQGYEWLRMIHFGLTTSSSVYGGLFYTLIG
                     AHGVHVIGGLIWLTIVCWQATRGRFTKKDFVGVQTARMYWTFVVALWPVLYGLVYLY"
     gene            1837..2133
                     /locus_tag="VLM90_07195"
     CDS             1837..2133
                     /locus_tag="VLM90_07195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12784.1"
                     /translation="MCVKARILVAFLIGTFLILPTLAKACSVCFSGDDDAVTHAFNWS
                     VGFLLAAPYAIAGTIAGCLVIAYRRAAARQARSAELELQEAINPLIWTQEESAK"
     gene            2130..>2431
                     /locus_tag="VLM90_07200"
     CDS             2130..>2431
                     /locus_tag="VLM90_07200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12785.1"
                     /translation="MSEAVAVHGAAEPAATPLTPESWGKLGMWLFLAGDAMSFGCLIV
                     GYGILRHASKTWPVPAEVLGINLTAIMTFLLIVSSVTMVLGLQGIQDGDKGKFKKF"
BASE COUNT          394 a          701 c          751 g          585 t
ORIGIN      
        1 gattgcgttg cgagcctttc gcttgtcgca accggctggc gcagcccacg ggcgccctgt
       61 attgacccaa cagtattcgc tatgaactcg aacaccggca ccgccgctct gaccggcgcc
      121 ggcgcattgc gccgggccgc cgattttgtc gagttggcaa aaccgcgcgt cgtgctcatg
      181 gtgttgatca cgaccttcgt cggtttctat ctcggatcgg agcaggtgcc caactatctg
      241 gtgctggcgc aaaccttgat cggcaccgcg ctggcggccg gcggtaccct ggcgctcaat
      301 caatacatgg agcgggatac cgacgcggtc atgcagcgta cccaacgccg gccgctgccg
      361 gatggccggt tgcaaccccg cgaagcggta tggttcggtc tcgccgtgac cgttctgggg
      421 cttgtctatc tagcgctgac ggtgaatctg ttgagcgctt gcgtcaccgc gttcatcacc
      481 atcagctatt tactctttta cacgccgctc aaacggcgta gctcgctgtg catgctggtc
      541 ggcgccgtgc ccggtgcctt gccgccggtg atcggctggg tggcgacgcg cggcatgttg
      601 gaagtcgatg cctgggtgct gttcgcgatc atgtttctct ggcaagtgcc gcataccctg
      661 gcgatcgccc ggctttaccg cgacgactac gccaaggccg gcatcatgtt tctgccggtg
      721 atcgagccgg aaggcggcag taccaatcgc cagatcatca gccatagcgc cgcgctgttg
      781 gccgtgagtc tattgccgac cctgctcgga ctcgcgggcg ggatttattt caccgcggcg
      841 tttgttttag gcgccggttt catcgctgct ggcatcgccg tggcactgaa ctccaccttg
      901 gccaacgccc ggcggctgct gtttgtttcc ttggtttatc tacccgtgct cttgctggtg
      961 atggctttag atcgagtccc tttatgaatc aaaccatgac aaaccctggc cgaacaaaag
     1021 ctgcgaagcg cgggcgtttc ggcgcgctct tggcagctgc tgtgattctc tatatcgctg
     1081 cggtcatggt gttcatcgtc gtctactgaa ccattgacta cggcaaaaat catgacaacc
     1141 agttcggcgg cacgcaaact cgatgacgcg gcaccggtgg cgccggcgcc gcgtcgagaa
     1201 tttgccggcg gcggcggtcc gccggtgcga cccaatgtgc caatccttaa caatgccgag
     1261 ctcggcgtga tcatgctgct tggtgcggaa ctgatgttct tcgccggtct gatcggcgcg
     1321 ttcttggttt ttcgtctaag cgccacagtc tggccaccgc cgtttcaacc gcgcttgccc
     1381 atcggtgtga ccggcgtcaa tacggtcatc ttgctcgtca gcgccctgac cgtgcattgg
     1441 gcggttggcg cggcgcgcgc cggcgccgct atcttgcgct atttggcctg gaccgcactt
     1501 ttaggtgcgc tgttcttgct gatccagggc tatgagtggc tgcgcatgat ccatttcggc
     1561 ctgaccacgt cgagcagcgt ctatggcggc ttgttttaca ccctcatcgg cgcccatggc
     1621 gtccatgtca tcggcggact gatttggctg acgatcgtct gctggcaggc cacgcgcggg
     1681 cgctttacca agaaagattt tgtcggcgtg caaaccgcgc gcatgtattg gacctttgtc
     1741 gtggcgcttt ggccggtgct gtacggcttg gtttatcttt actaagcgca gtttggttga
     1801 cagggcagag ccgttaagtt atttttttgc ctgtttatgt gtgttaaagc gagaattttg
     1861 gttgcgtttc tgatcggtac ttttttaata ttgccgacgc tggccaaggc ctgttctgtg
     1921 tgtttttccg gcgacgatga cgctgtgacc cacgccttca actggagcgt cggtttcctg
     1981 ctcgccgcgc cctacgccat cgccggaacc attgccggat gtttagtgat tgcgtaccgc
     2041 agagcagcgg cgaggcaagc aaggtcggca gagctggaat tgcaggaagc gattaatccg
     2101 ttgatttgga cccaggagga aagcgcgaaa tgagtgaagc ggtagcggtg catggtgcgg
     2161 cggagcccgc cgcaaccccg ttgaccccgg agagctgggg caagctcggc atgtggttgt
     2221 ttctcgccgg cgacgcgatg tcgttcgggt gtttgatcgt cgggtacggc atcctgcgcc
     2281 acgcgagcaa aacttggccg gtgccggccg aggtgttggg cattaacctt acggcaatca
     2341 tgaccttttt gctgatcgtc agcagcgtca cgatggtgct ggggttgcag ggcatccagg
     2401 acggcgacaa gggcaagttc aagaagttca t
//
LOCUS       DATIRS010000570         1680 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_436377, whole genome shotgun sequence.
ACCESSION   DATIRS010000570 DATIRS010000000
VERSION     DATIRS010000570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1680)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1680)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1680
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_436377"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..768)
                     /locus_tag="VLM90_07205"
     CDS             complement(<1..768)
                     /locus_tag="VLM90_07205"
                     /inference="COORDINATES: protein motif:HMM:NF014027.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008612 - peptidyl-lysine modification to
                     peptidyl-hypusine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyhypusine synthase family protein"
                     /protein_id="HSQ12786.1"
                     /translation="MKTVKFEELRSLDLRECASVGDIVKGLRYCAFGGRMLGEVADTI
                     YEMATAKDKPLLIYDGSEASPLGALLQKFVANRWCRKILQPSQYAKGKSGGENVIVVG
                     GYSERDAAAIYSKPARALFINPFDMACPGQIRDGLFPDAVFADPRYVVPVIYSALDEW
                     ITGRASSVGSLMSRLAPYGGLAAQVARGAKALEAMIGDKNCARFLTVSGAMTVGKMDL
                     VICDMIEQGWVQAISCTGALMAHGLVSSIGLKHYKYDP"
     gene            complement(902..>1680)
                     /locus_tag="VLM90_07210"
     CDS             complement(902..>1680)
                     /locus_tag="VLM90_07210"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ12787.1"
                     /translation="LRIAEEFAMVDQLSGGRLLFGAGRGMHPTEYAVFGADWNSAQQR
                     LPEALDVVMKAWGGEEFEWRGKYFNFPKLTVHPKPRQRPHPPIYVTANRDPESFTMIG
                     RRGHHLMTLPWIATNEEQRPRVEIYRAALREGGHRVEDKDVFTMYPVYVGASDAEARS
                     EVIEHWHRWRAFAMEAQNLTPDNPAYQRVLGHLDYDAMVRDSRGVFGGPETCARILKR
                     IIEVVDTTHIGLTFHFGGLSQDKVLKSMERCARKVLPGLR"
BASE COUNT          333 a          525 c          486 g          336 t
ORIGIN      
        1 cggatcgtac ttgtaatgct tcagaccgat ggaagacacc agtccatgcg ccattagcgc
       61 gccggtgcaa gagatggcct ggacccatcc ctgttcgatc atgtcgcaga tgacgagatc
      121 catcttgccc acggtcatgg cgccgctaac ggtgagaaag cgcgcgcagt tcttgtcgcc
      181 gatcatcgct tcgagcgcct tggcgccgcg cgccacctga gcggccagac cgccgtaggg
      241 cgccagcctg gacatcagtg aaccgaccga actagctctg ccggtaatcc attcatcaag
      301 cgccgagtaa atcaccggca cgacgtagcg cggatcggcg aacactgcgt cggggaaaag
      361 gccgtcgcgg atctggccgg ggcaggccat gtcgaacgga tttatgaaaa gtgcccgcgc
      421 cggtttcgag tagatcgccg ccgcatcccg ctccgaataa ccgccgacga cgatgacgtt
      481 ttccccgccg ctcttgccct tggcgtactg cgacggctgg aggattttcc ggcaccagcg
      541 gttggcgacg aacttttgca aaagcgcacc gagcggcgaa gcctcgctgc cgtcgtagat
      601 cagcagcggc ttgtctttcg ccgtcgccat ttcatagatc gtgtcggcga cttcgccgag
      661 catgcgcccg ccaaaggcgc agtaacgcag ccctttgacg atgtcgccga ccgacgcgca
      721 ttcgcgcaaa tccagggatc gaagttcttc aaattttact gttttcaaga ataggctctc
      781 ttagacggca gtttgcttgg taacacgcgg tatcagctca gtcaatttaa gatagggtta
      841 cggcgccgtt cttagaagcg tcaacctgcg gcgcggagtg aaaattcctt cgtcggagaa
      901 atcagcgcag ccccggcaga accttgcggg cacagcgctc catcgacttg agcactttgt
      961 cctggctgag cccgccgaag tgaaaggtca aaccgatgtg cgtcgtgtcg acgacttcga
     1021 tgatgcgttt caagatgcgc gcgcaggtct ccgggccgcc gaacacgccc cggctgtcgc
     1081 gcaccatggc gtcataatcc aagtggccga gcacgcgctg gtaggcaggg ttgtccggcg
     1141 ttagattttg cgcctccatt gcgaaggcgc gccagcgatg ccaatgctcg atgacttcac
     1201 tgcgcgcctc ggcgtcactc gctccgacgt aaaccggata catggtaaaa acgtctttgt
     1261 cttcgactct gtgcccgccc tcgcgcaaag cggcccggta gatctcaacc cttggccgct
     1321 gctcctcgtt ggtggcgatc cagggcaagg tcatcaaatg atgaccgcgc cggccgatca
     1381 tcgtaaagct ttccggatcg cggttcgccg tcacgtagat cggcggatgg ggtcgttgcc
     1441 tcggcttggg gtgcacggtc agcttgggaa aattgaaata ctttccccgc cattcgaatt
     1501 cctcaccgcc ccaagccttc atgacgacat ccaatgcctc aggcagccgt tgctgcgcgc
     1561 tattccagtc ggcgccgaac acggcatatt ccgtcggatg catgcctcgc cccgcgccga
     1621 agagaagccg cccgccggaa agttgatcaa ccatggcgaa ctcttcggcg atgcgcaacg
//
LOCUS       DATIRS010000571         1676 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_436427, whole genome shotgun sequence.
ACCESSION   DATIRS010000571 DATIRS010000000
VERSION     DATIRS010000571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1676
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_436427"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(74..1072)
                     /locus_tag="VLM90_07215"
     CDS             complement(74..1072)
                     /locus_tag="VLM90_07215"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12788.1"
                     /translation="MLHLFSFIVAILIGFVWLIAPVAAQSLEKLRLVYSAIGGSQASF
                     WVPYEAGIFRKHGLDVELLYVAGGGRAAHVVQSGEVPIGVFTGGAVINSNLAGGDLVV
                     IASSMNVMTFVVMARPEIRRVEDLKGKKIGVSRFGSATDFGLRYVEEQWPIKRQRDFA
                     VLQMGGVTDVYNALRAGVLDAAVINAELAILGRREGFRELADIAKMGINFPTSSVITT
                     RSYIKRSENTVRKFIRGFVEGVHYGKSQRAPTIKIMMKYLRSSDAAMFNELYDMYILQ
                     NIPRIPRPSPESLKTVIDQMAETDPRVANLKPEHFIDGRFFAELDKEGFIQKLGKQ"
     gene            complement(1210..>1676)
                     /locus_tag="VLM90_07220"
     CDS             complement(1210..>1676)
                     /locus_tag="VLM90_07220"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HSQ12789.1"
                     /translation="LRIERRARVIALTEAQPVLPVVEDYLRGAFDLGLKIGMASSSSA
                     NHVRGHLQRLELLQHFHTTKCFEDTEAHKPEPAPYRAVLDALGVAPHEAVAFEDSPNG
                     VTAARAAGIFCVAVPNPVTCRLPLDHADHRLASLADEALEQVLMRAVEKITS"
BASE COUNT          365 a          502 c          487 g          322 t
ORIGIN      
        1 cggcatactc tgggcgcagc ccaaggcggg aaccggtgaa gacgcaaatt ctgcgtgcgc
       61 tatttggcat gattcattgt ttcccgagct tctgaataaa cccttcttta tccagttccg
      121 cgaagaaccg tccgtcgatg aaatgttccg gtttcagatt ggcgacacgg gggtcggttt
      181 cggccatttg gtcgatgacg gtcttcagtg attccggcga cggccgcggg atgcgcggaa
      241 tattctgcag gatatacatg tcatagagct cgttgaacat cgccgcgtcg ctgctgcgca
      301 ggtatttcat catgattttg atcgtcggcg cgcgctggct cttgccgtag tgcacgccct
      361 cgacaaagcc gcggatgaac ttgcgcacgg tattttcact gcgcttgatg taactgcgcg
      421 tcgtgatcac cgaggacgtg ggaaagttga tgcccatctt ggcgatgtca gcgagttcgc
      481 gaaaaccctc acgccggccc aagatcgcca gctcggcatt gatcacggcg gcgtcgagca
      541 cgcccgcccg cagtgcgttg taaacatcgg tgacgccgcc catctggagc acggcaaaat
      601 cgcgttggcg cttgatcggc cactgctctt cgacgtaacg cagaccgaaa tcggtggctg
      661 agccgaagcg cgacacaccg atctttttac ccttgagatc ctcgacgcgg cgaatctccg
      721 ggcgcgccat gacaacgaac gtcatgacat tcatcgaact ggcgatgacg acgagatcgc
      781 cgccggcgag gttggaattg atcaccgcgc cgccggtaaa aacaccgatg ggcacctcgc
      841 ccgactgcac cacgtgcgcc gcgcgcccgc cgccagcgac atagagcagt tcgacgtcga
      901 ggccgtgctt gcggaagatg ccggcttcgt agggaaccca gaaggacgct tgcgatccgc
      961 cgatggcgct gtagaccaag cgcagtttct ccaaagactg cgccgccacg ggagcaatga
     1021 gccaaacaaa accgataaga atcgcgacaa tgaagctgaa caggtggagc atgacatttc
     1081 cttttctatg acttggcaaa tcgttcctgg acataaccgg caacaaccag atcgaagccg
     1141 gcgcaacgcc aacggtaccc agagggcatg aagttgccgg ccaaagtaac atgcgccaaa
     1201 tttcgccgtt cacgatgtaa ttttctcaac cgcccgcatc aggacttgtt cgagcgcttc
     1261 atcggcaagc gaagccaagc gatgatcggc atgatcgagc ggtaagcgac aggtcaccgg
     1321 attgggcacg gcgacgcaaa agatgccggc cgcccgcgct gcggtcacgc cgttgggtga
     1381 atcctcgaac gccactgctt catgaggagc gacgccgagc gcgtcgagca ccgcccgata
     1441 gggcgccggc tcgggcttat gcgcttcggt gtcctcgaaa cattttgtcg tgtggaagtg
     1501 ttgcaggagc tcgagccttt gcaagtgtcc gcgcacatgg ttcgccgaag aactcgacgc
     1561 catgccaatt ttcaaaccga gatcgaaagc gccgcgcaag taatcctcca ctaccggcaa
     1621 taccggctgc gcctccgtca acgcgatgac ccgagcgcgc cgctcgatgc gcaacg
//
LOCUS       DATIRS010000572         2273 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1714877, whole genome shotgun sequence.
ACCESSION   DATIRS010000572 DATIRS010000000
VERSION     DATIRS010000572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2273
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1714877"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..606
                     /locus_tag="VLM90_07225"
     CDS             <1..606
                     /locus_tag="VLM90_07225"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HSQ12790.1"
                     /translation="ERMIAVMFADIRSFTGIAETKLPYELVFFLNSYFAAVGAAIVSS
                     GGMIDKFVGDGVMALFGVESGPEEGCRQALAAAQAMIKRVDELSGALAEELSAPLRIG
                     IGIHCGPAVVGRMGYGETIHVTAIGDTVNVASRLQDATKEFHCQLVISAEVAKQSGLN
                     TAGLPRHELTVRNRREALAVFALDDVSQIAERSRLVGVERL"
     gene            complement(861..1181)
                     /locus_tag="VLM90_07230"
     CDS             complement(861..1181)
                     /locus_tag="VLM90_07230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12791.1"
                     /translation="MQRSVQAGRQGLVEAKYDELLNFADSDKFTEREKVALTYTSAIA
                     WNSDIADDALWEKLHRLFSIPELVEFGFFIGLTLGQQRWIKTLGIDHGAVLGDTTAGL
                     APTK"
     gene            complement(1185..1430)
                     /locus_tag="VLM90_07235"
     CDS             complement(1185..1430)
                     /locus_tag="VLM90_07235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12792.1"
                     /translation="MPRIPYVDPDKVTDPEIKGYLERARREGTPRPESQAVRANVPEV
                     IRAFSQAWELTFRAGVVDHALKELCRVYVSKSIDCQY"
     gene            complement(1488..1976)
                     /locus_tag="VLM90_07240"
     CDS             complement(1488..1976)
                     /locus_tag="VLM90_07240"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSQ12793.1"
                     /translation="MPKVTSLGHLGFHVRDMERSVAFYRDILGLTVSDRSPRGAVFMT
                     SQDRSVEHHELYLAPGRDDDGKVNVLQQISFRCPTLKDVKDFYQLFVDKQVPINRCVS
                     HGNTVSIYASDPDGNSVEVYWPSGVDVPQPFGKPMDLTKSEVEIREQLNQILKEWQSQ
                     AS"
BASE COUNT          456 a          626 c          684 g          507 t
ORIGIN      
        1 gaacgcatga tcgcggtgat gttcgccgat atccgctcgt tcaccggaat cgccgaaacc
       61 aagctgccct acgagttagt atttttcttg aacagctatt tcgccgccgt cggtgcggca
      121 atcgtctcga gcggcggcat gatcgacaaa ttcgtcggtg atggcgtgat ggcgctgttc
      181 ggcgtcgaaa gcggacccga agaaggctgc cgccaagcgc tcgccgctgc ccaggcgatg
      241 attaagcggg tcgacgagct cagcggagca ctcgcagaag aactcagcgc gccactgcgc
      301 attggcatcg gcattcactg cggcccggcg gtggtagggc gcatgggcta cggcgaaacg
      361 attcacgtca ccgctatcgg tgatacggtc aacgtcgcca gccggctgca agatgcgacc
      421 aaggagtttc actgtcagtt ggtgatctcg gcagaagtcg ccaagcagtc gggattgaac
      481 actgccggcc tgccgcgcca cgaactcacc gtgcgcaacc ggcgcgaggc gctggcggtt
      541 tttgcgctgg acgatgtttc gcaaattgct gagcggtcgc gcttagtcgg cgttgagcgt
      601 ttgtaaaaat ggttttcacc acgaagtacc cagcgcggcg cagccgcagc cgatattcgg
      661 attatctccc gcaaagacgc aaaggccgca aaggtcggaa aataaaggaa gcggagccac
      721 gcaacggggc aatgttagga tcgggcttgt cgccgcgaat gcgcgtgttg gcgcattcat
      781 atacgtacgc tgcgccggtg ttttttgact cgcggccgaa accttcgcgc acttcgtggc
      841 gaggtgaatg ttttctccgc ttatttcgtt ggcgcgagac cggctgtggt atcgccgagc
      901 acggcgccat ggtcgatgcc gagggtttta atccagcgct gttggccgag ggtgaggccg
      961 atgaaaaaac cgaactcgac caactctggg atcgaaaaaa gtcggtgtaa tttttcccag
     1021 agcgcgtcgt cggcgatgtc tgagttccag gcgatcgcgc tggtgtaggt tagcgcgact
     1081 ttttctcgct cggtgaattt gtccgagtcg gcaaaattga gcaactcatc gtacttcgct
     1141 tcaacgagtc cttgccgtcc agcctggacg gagcgctgca cgcctcaata ctgacagtca
     1201 atcgatttcg aaacgtaaac ccggcaaagc tctttgagcg cgtggtcgac gacgccggcg
     1261 cggaacgtga gttcccacgc ctgcgagaac gctcggatga cctcggggac gttggcgcgc
     1321 acggcctggc tttcagggcg cggcgtgcct tcacggcgag cgcgctccag atagcctttg
     1381 atctctgggt cggtaacttt atccgggtcg acatagggaa tacgtggcat agacaactcc
     1441 aatgcctcct gggctcgccg atggtcaata attattaaca acggttttta tgacgcctgg
     1501 ctctgccatt ctttaaggat ctgattgagt tgttcgcgga tttccacttc gcttttggtc
     1561 aagtccatcg gtttgccgaa gggttgcggc acgtcgacgc cgctcggcca gtagacttcc
     1621 accgagttgc cgtcggggtc gctggcgtag atgctgacgg tgttgccatg actgacgcag
     1681 cggttgatcg gcacctgctt gtcgacgaat agttgataaa aatctttaac atccttcaac
     1741 gtcgggcagc ggaaggaaat ctgctgcaag acgttgacct tgccgtcgtc gtcccgcccc
     1801 ggcgccaagt agagctcgtg atgctcgacg ctgcgatctt ggctggtcat gaacacggcg
     1861 ccgcgcgggc tgcggtcgct gacggttaaa ccgagaatgt cgcggtagaa cgccaccgag
     1921 cgttccatat cgcgcacatg aaaacccaga tgtccgaggg atgtgacttt aggcataagc
     1981 tctcctttga tcgggcggat tgttaaatgg cggtgccgac gatgtcaatg gccggcttta
     2041 atctaatatt ccccgcagct ttctgcggga acaatattgc tggggtttcc aaagggggtt
     2101 gaacatcccc tttggtcgcg agcggggtcc gtaccccgat cgcgaaatgc ccggttgatt
     2161 gtaaatcatg cttgaatcat tgacgagcct tatatacggc ttcaacatcg cgctgcagcc
     2221 gcaaaatctt ctctactgct tcatcggcgg caccatggga accctcgtcg gcg
//
LOCUS       DATIRS010000573         3688 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1910175, whole genome shotgun sequence.
ACCESSION   DATIRS010000573 DATIRS010000000
VERSION     DATIRS010000573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3688
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1910175"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..907)
                     /locus_tag="VLM90_07245"
     CDS             complement(<1..907)
                     /locus_tag="VLM90_07245"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12794.1"
                     /translation="MLLPSAGWTQMKARVAWTSFASNMSGTWVAQEEGLFKKNGLEVE
                     LVHIPSTSRAIQVMLAGELQYSYMDGRNSVTAALKGTDVTIIAGVANRLVFSFMARPE
                     IKSFAEMKGRKIGITRLGSSTHSVTLWVMNNAGIKPEEYQMLQLVDVPNIFTAMVAGQ
                     VDAGALSPPTNFRARKAGLSELMDVTKDGPEYVSVAIGSTRSFIKANEEMTRRFIRGY
                     SEGVQFLKANKAAGIRAIQKYARIKDPEILEATYGEASAYIETTPYVTRRGMETIIGE
                     LLPTEPKAKTAKPEDFLDTRFVAQLE"
     gene            1103..2083
                     /locus_tag="VLM90_07250"
     CDS             1103..2083
                     /locus_tag="VLM90_07250"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12795.1"
                     /translation="MKRLASIALLYVLLFSSTVQSADRVRIAYSSISAAYTGIWVARD
                     AGFFAKEGLEDQIIFIPSATQLAQVLVAGDVDIASLGGGPVMAASLSGADMKVIGNNV
                     NKLIFSIHAKPEVKNLEDLRGKRIAVSRFGSSADIAARAALRKVNMDSSKDVILMQLG
                     TMSNMFGALKSGAVEASVVSPPTQFLSEKMGFKEVFSITELDLAYPNPSMAVPGELIR
                     RKPDMIDRFMRAYVRAMQRARIDRDGTVKTLAKYTMINDAEILNRAYDFYMTKVLERA
                     PYINMQGMQNALDDVARTVPAAKNAKPEQFVDLRFLDRLEKSGLLKDLYK"
     gene            complement(2430..3428)
                     /locus_tag="VLM90_07255"
     CDS             complement(2430..3428)
                     /locus_tag="VLM90_07255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12796.1"
                     /translation="MRDVTIVVGTIGQSIMRSEDNGQTWARIGPRRGFAYEASVRCIA
                     MHPRDHKTLFAGTEKGLYRSADGGANWQYIDSALNPHYVWVIGIDPVNPDNMFVGTGT
                     PTPAMLFRSKDGGRSFDKRPVEVATECEAVGTPRFTGIAVDPVEPNHVWAGLEVDGAR
                     HSSDGGDTWSIVDVTGRRDIHNVAVTAGPPKTAFIMANREIYASTDNGKSWEPRDMQK
                     CLPWDYPRKENYLRGIAVDPANPKKILVSFGDFTPGTSGAIAQSDDFCKSWKLLPLPQ
                     EPNSTMWTFATNSDDPKVIFAASRYGYLYRSDDGGVSWTKLRRELSEIAAVCWLPN"
     gene            complement(3483..>3688)
                     /locus_tag="VLM90_07260"
     CDS             complement(3483..>3688)
                     /locus_tag="VLM90_07260"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HSQ12797.1"
                     /translation="QLALAWLMAQGSDVIPIPSNKTRAHLEENIKATEIKLGTEDLTR
                     LDAIFPPGAAAGPRTKDMHRVNI"
BASE COUNT          787 a         1145 c          996 g          760 t
ORIGIN      
        1 tctccaactg cgcgacaaag cgcgtgtcga gaaaatcctc cggcttagcc gtcttggcct
       61 taggctcggt gggcagcaac tcgccgatga tcgtctccat ccccctgcgc gtcacgtacg
      121 gggtcgtctc gatataagcg ctcgcttcgc cgtaggttgc ttcgagaatc tccggatctt
      181 tgatgcgcgc gtacttttga atcgcgcgga tgccggcggc cttgttcgcc ttcaaaaact
      241 gcacgccttc gctgtagccg cggatgaaac ggcgcgtcat ctcttcattg gccttgatga
      301 acgagcgggt cgaaccgatg gccactgata cgtactcggg gccgtccttg gtcacgtcca
      361 tcaactcgct caagccggct ttacgggcgc ggaaattggt cggcggcgac agcgcgccgg
      421 catcgacctg gccggcgacc atcgcggtga agatattcgg cacgtcgacc aactgtaaca
      481 tctgatactc ttccggcttg atgccggcgt tgttcatgac ccaaagcgtc acgctatgtg
      541 tcgacgagcc cagccgcgtg atgccgattt ttcgcccttt catctcagca aagctcttga
      601 tctccgggcg cgccatgaag gagaacacca aacggttggc aacgccggcg atgatcgtca
      661 cgtccgtgcc cttgagcgcc gccgtgaccg aattgcggcc gtccatgtag gagtactgca
      721 gctcgccggc gagcatcact tgaatcgccc gcgaggtcga cgggatatgc accagctcga
      781 cttcgaggcc gttcttctta aacaaccctt cttcctgcgc cacccaagtg ccgctcatgt
      841 tactggcgaa cgaagtccac gccacccgcg ccttcatctg cgtccagccg gcgctcggca
      901 atagcattgc cgccagagca gggatcaacg caacggacaa acattttgaa acaagcatca
      961 tcggcatacc cggccatttc aaaccatgga tgaccgctcc atatcacaga actcttgtcg
     1021 cggtccatgg catcttatac ttgattttgc ccaaccggcc gtcgtagatt cacccaagct
     1081 cagggcgcgc cggaggagtc caatgaaacg tctcgcgagt atcgccctac tgtacgttct
     1141 gcttttcagt tcaacggttc aatccgctga ccgcgtgcgc atcgcctaca gctcgatcag
     1201 cgcggcctac acgggaatct gggttgcccg cgacgccgga ttcttcgcca aagagggact
     1261 ggaagatcag atcatcttca ttcccagcgc tactcaactc gcccaggtct tggtcgccgg
     1321 cgatgtcgac atcgcgtccc tcggcggcgg cccggtgatg gccgcgtcat tgagcggcgc
     1381 cgatatgaaa gtcatcggca acaacgtcaa caaattgatc ttctcgattc acgccaaacc
     1441 ggaggtcaag aacctcgaag atctgcgcgg caaacggatc gccgtcagcc gtttcggttc
     1501 gagcgccgac atcgccgccc gcgccgcgct gagaaaagtc aacatggatt caagcaaaga
     1561 cgtgatcctc atgcagttag gcaccatgtc gaacatgttt ggcgcattga agtcaggcgc
     1621 ggtcgaagcc tcggtggttt cgccgccgac gcagtttctt tccgagaaaa tgggtttcaa
     1681 ggaagtcttc agcatcacgg aattggatct cgcctatccc aatccgtcga tggccgtgcc
     1741 gggcgagctg atccgcagga aaccggacat gatcgatcgc ttcatgcgcg cctacgtgcg
     1801 cgccatgcag cgcgcgcgca tcgaccggga cggcacagtc aaaacattgg cgaaatacac
     1861 gatgattaat gacgcggaga tactgaatcg cgcctatgac ttttacatga ctaaagtcct
     1921 cgaacgcgct ccctacatca acatgcaggg tatgcaaaac gcattggacg atgtcgcgcg
     1981 aacggttccc gcggcgaaaa acgccaaacc agaacagttc gtcgacctgc gattcctcga
     2041 tcgactggaa aaaagcggtt tactgaagga cttgtacaaa tagagattta gccgcaaaaa
     2101 acctagcgcg acagagtcgc aagcgaaact cggaacgtct cgcgcaaagc acgcaaaggg
     2161 cgcgaaggaa gagaaaaata gatttccaac tttgcgacct tggcgacctt ggcgcgagga
     2221 ttgtccgaat ccgagacgct ccaggctgcg aaatcgcacg ccgcgtaaat gttcacagat
     2281 agcaatgcaa agggcgcaaa atctaacgga acaattcaca acgaaggact tccagcctca
     2341 ccgtccgccg gtggaaggct gtgatgggag cccgacgttg aacgtttgaa cctttgaacc
     2401 gtgcggcgcc gtacgccgcg ccgccgcact taattcggca accagcacac cgccgcgatt
     2461 tcgctcaact cgcgccgcaa tttcgtccac gacacgccgc cgtcatcgct gcggtagaga
     2521 taaccgtagc ggctcgcggc gaaaataacc ttcgggtcgt cggaattggt cgcgaacgtc
     2581 cacatggtcg agttgggttc ctgcggcaac ggcagcagct tccagctctt acaaaagtca
     2641 tcgctttgcg cgattgcgcc tgaggtgccc ggcgtgaagt cgccaaagct caccaagatt
     2701 ttcttcggat tggccggatc tacggcaatg ccgcgcagat aattctcctt gcgcggataa
     2761 tcccagggca gacacttctg catgtcgcgc ggctcccagc tcttgccatt atccgtgctc
     2821 gcgtagatct cccggttcgc catgatgaat gccgtcttgg gcgggccggc ggtgaccgca
     2881 acattgtgaa tgtcgcgccg cccggtcacg tcaactatgc tccaggtatc gccgccgtcg
     2941 ctgctgtgtc gggcgccgtc cacttcgagg cccgcccaga catgattcgg ctccaccgga
     3001 tcgacggcga tgccggtgaa cctcggcgtg ccaaccgcct cgcattccgt cgccacttcc
     3061 accggccgct tgtcaaagct gcggccgcca tccttcgaac gaaacagcat cgccggcgtc
     3121 ggcgtgccgg tgccgacaaa catattatcc ggattcaccg gatcgatgcc gatcacccag
     3181 acatagtgcg gattgagcgc cgaatcgatg tactgccaat tggcgccgcc atcggcgctg
     3241 cgataaagcc ctttctccgt gccggcaaaa agagtcttgt gatctcttgg atgcatggcg
     3301 atacagcgca ccgaagcctc ataagcaaat ccccgccgcg gcccgatgcg cgcccaagtc
     3361 tggccattgt cttcactgcg catgatgctt tgtccgatgg ttccgacaac aatagttacg
     3421 tctcgcatgt ttcctcccaa gacgacttga acgttttgaa ctgctggaac gattggaacg
     3481 aactaaatat tgacccgatg catatccttg gtccgcggtc ccgccgccgc tcccggcgga
     3541 aagattgcgt cgagccgggt taaatcctca gtgcccagtt tgatctcggt cgctttgatg
     3601 ttctcttcca aatgcgcccg cgttttattg ctggggatcg gaatcacgtc acttccctga
     3661 gccatcaacc acgccagcgc cagctgtg
//
LOCUS       DATIRS010000574         1974 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_731531, whole genome shotgun sequence.
ACCESSION   DATIRS010000574 DATIRS010000000
VERSION     DATIRS010000574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1974)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1974)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1974
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_731531"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1084)
                     /locus_tag="VLM90_07265"
     CDS             complement(<1..1084)
                     /locus_tag="VLM90_07265"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSQ12798.1"
                     /translation="MAKRQLKYVGHSVARVDGIDKVTGKAKFVGDITVPGMLYGKILR
                     STYPHARIRAIDVTQAEALPGVAAVLTAADIGDLNPIYNGRPVIAMNKVRYVGEPIAA
                     VAAVDLATAEEALALIQVDYEALPTVTGIDAAIAKDAPLVHDDKSGNIGTHEKVLRGD
                     VDQGFAESDAVVEDTFMFPMFYHYAMEPHSVIAHYDVNDEITVWSSAQHPFQVRGDIA
                     RIFKVPQAKVRMIINYLGGGYGSKSYTKFEPLAVALARKAKQPVRICNSVGESMVTVR
                     RHGARVRIKTGVKRDGTIMAREADIYLDTGGYDDNGPQVTARSATRILGPYWIPNIRT
                     DAYQVYTNTGSAGSYRAIGAPQVVYAG"
     gene            1244..1939
                     /gene="sfsA"
                     /locus_tag="VLM90_07270"
     CDS             1244..1939
                     /gene="sfsA"
                     /locus_tag="VLM90_07270"
                     /inference="COORDINATES: protein motif:HMM:TIGR00230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000023 - maltose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA nuclease SfsA"
                     /protein_id="HSQ12799.1"
                     /translation="MNFPSRLIRGTLVQRYKRFLADVRLADGEIVIAHCTTTGSMLGC
                     KEPGSAVFISRSDNLNRKLAYTWEMIQINRAWVGINTMLPNRLVAEAITAGVIPELSG
                     YEIIRREVKVSAHSRLDLCLEGQRGLCFVEVKNVTVCFDGAAAFPDAVSERATKHLKE
                     LMRLKRKSHRAAVVFVVQRGDCDHFRPADEIDPAYGRWLRRAVKAGVEVLPYVAKVTP
                     KGIVITKRIETRF"
BASE COUNT          386 a          619 c          556 g          413 t
ORIGIN      
        1 cgccagcata aacaacctga ggggcgccga tggcgcggta ggaacccgcc gagcccgtgt
       61 tagtataaac ttgataggcg tcggtgcgga tgttgggaat ccagtacggc ccgagtatgc
      121 gcgtggccga gcgcgccgtc acctgcggtc cgttgtcatc gtagccgccg gtgtcgagat
      181 agatatccgc ttcgcgcgcc atgatcgtgc catcgcgctt cacaccggtc ttgatgcgca
      241 cccgcgcgcc gtgacggcgc acggtcacca tcgactcgcc gacggaattg cagatccgca
      301 ccggttgttt tgccttgcgc gccagcgcca ccgccagcgg ctcgaacttg gtgtaagact
      361 tgctcccgta accgccgccg agatagttga taatcatgcg gactttggcc tgcggcacct
      421 tgaaaattct ggcgatatcg ccgcgcactt ggaacggatg ctgcgccgac gaccacacgg
      481 ttatctcgtc gtttacgtca tagtgagcga tgaccgaatg cggctccatg gcatagtgat
      541 agaacatcgg aaacataaaa gtgtcttcga cgactgcgtc ggattcggcg aaaccctggt
      601 caacgtcgcc gcgcaagact ttctcgtggg tgccgatgtt gccgctcttg tcgtcatgaa
      661 caagcggcgc atctttggcg atcgccgcgt cgatgcccgt caccgtcggc agtgcttcgt
      721 aatcgacctg aatcagtgcg agcgcttcct ccgccgtcgc cagatcgacc gccgccaccg
      781 ccgctatcgg ttcgccgaca tagcggacct tgttcatagc gatcaccggg cggccgttgt
      841 agatcggatt gaggtcgcca atatcggcgg ccgtcagcac cgcggccacg ccggggagcg
      901 cctcggcttg cgtcacgtcg atggcacgga tgcgcgcgtg cggataggtg ctgcgcaaaa
      961 tcttgccgta aagcatgccg gggacagtaa tgtcgccgac gaacttagct tttcccgtga
     1021 ctttgtctat gccgtccacg cgcgcgacgc tgtggccgac gtattttaac tgccgtttcg
     1081 ccatgaactc tccgcaaccg aatttgattt atgactccta acaaagcccc tccgctagtt
     1141 caaggaacgc gtcgactttc aatgtgtcat ttcgaagcga atgaagaaac ttttctcctc
     1201 gaccagttgg gaatcgccgg cagatttcgc tataacctgg cgcatgaact ttccatcgcg
     1261 cctcattcgc ggcacgctcg ttcaacgcta caagcgcttc ctcgccgatg tccgcctcgc
     1321 cgacggcgag atcgtcatcg cccactgcac caccaccggc agcatgctcg gttgcaagga
     1381 gcccggcagc gccgttttca tttcgcgcag cgataatctg aaccgcaagc tcgcctacac
     1441 ctgggaaatg atccagatca atcgagcctg ggtcggcatc aacaccatgc ttcccaaccg
     1501 gctcgtcgcc gaggctatta cggccggcgt cattccggag ctctccggtt acgagatcat
     1561 tcgccgcgag gtcaaggtca gcgctcacag ccggctggat ttatgcctgg aaggacaacg
     1621 cggcttgtgt tttgtcgaag tcaagaatgt cacggtctgc ttcgacggcg cggcggcgtt
     1681 tcccgacgca gtcagcgagc gcgccaccaa acacctcaaa gagctcatgc gcctcaaacg
     1741 caaaagccac cgcgccgccg tggtcttcgt cgtccagcgc ggcgattgtg atcactttcg
     1801 ccccgccgac gagatcgacc cggcgtacgg ccgctggctg cgtcgcgcag tcaaggccgg
     1861 cgtcgaagtt ctgccctatg tcgccaaagt aacgcccaag ggaattgtga ttaccaagag
     1921 aattgagacc agattttgat catcttatat tgtcacgcac caatcgggca tgtt
//
LOCUS       DATIRS010000575         2029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_239523, whole genome shotgun sequence.
ACCESSION   DATIRS010000575 DATIRS010000000
VERSION     DATIRS010000575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2029
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_239523"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1892)
                     /locus_tag="VLM90_07275"
     CDS             complement(<1..1892)
                     /locus_tag="VLM90_07275"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSQ12800.1"
                     /translation="MAYKSVNRAVPRIEGADKVSGNMRYAADLNFPAALSAKILRTSL
                     PHARIVSIDTSKAAKLRGVRGIITGADVKGVMVGLRMKDMPLLAHDKVRYAGEPVAAV
                     AADTDEIAEEALNLIDVQYAALPFVTDPVQATTAGAPVLHDDPMSYKNAPERDIDLPN
                     VQSYGKWSNGDVDAGLQKAARVFEHTFRTPLGFHGYIEPHACTVEIHDDGRVEIWASN
                     KAPFTLRARFARDVGVEEAKVKVHILPVGGDFGGKTSVAEAPICYFLAKKTGKAVRMV
                     LEYTEEVTAISHRHPAVITLRTGVDGDNKICAMAIKAVFSGGGYAALKANAEVTVQGP
                     RRAASYYRFPAIQVETLCVYTNQVPCTQTRTPGSPQTTFAVESQIDIIARELGLDPVK
                     FRMNNLLNAGEPTPFGQKLQGIVVKETLSKALEASGWNKPKAKNVGRGVAVYERPSGA
                     GKSGAAITVEADGSLSVHLGVPDVGPGIHTVVQQIVSEVLELPRERVTVRVQDTDSSP
                     YDSGTGGSKSTNSVGTAAYQAVTEVKEKLVVLAAAKFGCKREEIQQVNGRYTVPGQMP
                     MSCTDMIRHAVAQNGGALTHLSNYEPARAPITSFAAQVAEVEVDRGTGQVRVTKLTTV
                     HDSGTI"
BASE COUNT          361 a          586 c          627 g          455 t
ORIGIN      
        1 aagatcgtgc cagaatcatg aaccgtcgtg agttttgtaa ctctgacctg gccagtgccc
       61 cggtcgacct cgacttcggc gacctgcgcg gcaaacgagg tgatcggcgc gcgtgccggt
      121 tcgtagttac tcaagtgcgt cagcgcgccg ccgttctgcg cgacggcgtg gcggatcata
      181 tcggtgcatg acatcggcat ttgccctggc actgtgtagc gcccgttcac ctgctgaatc
      241 tcttcgcgct tgcagccaaa ctttgccgcc gccagaacaa caagtttttc cttaacttcc
      301 gtgacggctt gataggcggc ggtgccgacg ctgttggtcg acttgctgcc gccggtgccg
      361 gagtcgtagg gcgagctgtc tgtgtcttgc acgcgaaccg tcacgcgctc gcggggcaat
      421 tcgagcactt cgctgacgat ctgttggacc acggtatgga tgccgggacc gacgtcgggc
      481 actcctaaat gcacgctcag gctgccgtcg gcttcgacgg tgattgccgc gccggatttg
      541 ccggcaccgg atggacgttc gtagacggcg acaccgcggc cgacgttctt tgccttcggc
      601 ttattccagc cggaggcttc caaagctttg ctcagggttt ccttgacgac gatgccttgg
      661 agcttttgcc cgaagggtgt cggctcgccg gcgttgagca gattgttcat gcgaaatttc
      721 accgggtcga ggccgagctc gcgagcgatg atgtcgatct gcgattcgac ggcgaaggta
      781 gtctgtgggc tgcccggcgt gcgcgtctgg gtgcagggga cttgattggt gtaaacgcac
      841 aaggtttcga cttggatcgc cggaaagcga taatagcttg ccgcgcggcg cgggccttgg
      901 acggtaactt ccgcgttggc tttgagcgcc gcatacccgc cgccgctaaa taccgctttg
      961 atcgccatgg cgcaaatctt gttgtcgcca tcgacgccgg tgcgcagcgt gatcaccgcc
     1021 ggatggcggt gcgaaatggc ggtaacctct tcggtgtatt ccaagaccat gcggaccgct
     1081 ttgccggtct tcttagcgag aaaatagcag atcggcgcct cggcgaccga agtcttgccg
     1141 ccgaaatcgc cgccgacggg aagaatgtga actttaactt tcgcttcctc aacgccgaca
     1201 tcgcgggcaa aacgagcgcg cagtgtgaat ggcgctttgt tcgacgccca gatttcaacg
     1261 cggccgtcgt catgaatctc gacggtgcat gcgtgcggct cgatgtagcc gtgaaatccc
     1321 aatggcgtgc ggaaggtatg ttcgaaaacg cgcgcggcct tttgcaagcc ggcgtcgaca
     1381 tcgccgttgg accatttgcc gtaggactgc acattgggca gatcgatgtc gcgctccggg
     1441 gcattcttgt aggacattgg atcgtcgtgc agcaccggag cgccggccgt ggtcgcctgc
     1501 accgggtcgg tgacaaaagg taacgctgca tattgcacgt caatgagatt caaggcctcc
     1561 tcggcgatct catcggtatc cgcggcaacc gcagccactg gctcgccggc gtagcgcacc
     1621 ttgtcatggg cgagcagcgg catgtctttc atgcgcagcc cgaccatcac gcctttgaca
     1681 tcggcgccgg tgatgatgcc acggacgccg cgcagcttcg cagccttgga ggtgtcgatg
     1741 ctgacgatgc gggcgtgggg cagggatgta cgtagtatct tcgccgacaa cgcggcgggg
     1801 aagttcaggt ccgctgcata gcgcatgttg ccggaaactt tatccgcacc ttcgatgcgc
     1861 ggtactgctc tgttgacgct cttgtatgcc atgaatagtc tccactttag ttggttgttt
     1921 ggcttcagcc gtactggcta ccacgcacct tctgtgtgcg gcgtaaatag aaatcctatg
     1981 tcactcgtgt cttcagtcca atcaaaagtt tcatctagcc actgaaaag
//
LOCUS       DATIRS010000576         1668 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_338147, whole genome shotgun sequence.
ACCESSION   DATIRS010000576 DATIRS010000000
VERSION     DATIRS010000576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1668
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_338147"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..604
                     /locus_tag="VLM90_07280"
     CDS             <1..604
                     /locus_tag="VLM90_07280"
                     /inference="COORDINATES: protein motif:HMM:NF018234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSQ12801.1"
                     /translation="TIDMPGAGENPCLGNDLRAERTFSAAMDYLETRHDIDGKRIACM
                     GGSFGGYWAAKLAHTEPKRLRGAVNWGAGVHRTFQEEWLRPALTLTASLYLMGPASLL
                     DARSYIFGVKSLEEVLKIAPTLSLVTQGLIDRPCAPLLCINGKDDDQHPISDLYLLAE
                     HGRPKDMRIIAGAGHMGRKKDQSNDQVVGIITDWLREKLA"
     gene            659..1207
                     /locus_tag="VLM90_07285"
     CDS             659..1207
                     /locus_tag="VLM90_07285"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HSQ12802.1"
                     /translation="MARIATIERKDDLKPEDQKIYDAIAQSRGAVGGPWKALLHSPEM
                     AYRTMHLGSYVRFESTLDHKVIEFTALVAARELDCKHEWAAHVNHGQKAGIPMDTIRA
                     VYQKKGAETFSSEDAQIVSFVREMIHQHRVSEPTFQAIHARFGDKGMVELSATIGYYA
                     MLACTLNTFDVYSVTPPDDLKI"
     gene            1346..>1668
                     /locus_tag="VLM90_07290"
     CDS             1346..>1668
                     /locus_tag="VLM90_07290"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ12803.1"
                     /translation="MKLKDQVALITGAGRNIGKAMAKLFAAEGAKIVVAEMHEGRGQA
                     VVDEINKSGGQAALVLGDVSKSADVQRLVKEAVGKFGGIDILVNNAALTDHANIFDST
                     EEEFD"
BASE COUNT          381 a          449 c          520 g          318 t
ORIGIN      
        1 cacgatcgac atgccgggcg ccggcgagaa tccctgtctc ggcaacgacc tgcgcgcgga
       61 gcgaactttt tccgcggcta tggactatct cgagacccgg cacgacatcg acggcaagcg
      121 catcgcctgc atgggcggca gcttcggcgg ctactgggcg gccaagctgg cgcacaccga
      181 gccgaaacgg ttgcgcggcg cggttaactg gggcgcgggt gtgcaccgga cctttcaaga
      241 agaatggctg cgcccggcgc tgacgctgac cgcgtcgctc tatttaatgg ggccggcgag
      301 cttgcttgac gcgcgctcgt atattttcgg cgtgaagagc ttggaggaag ttctaaaaat
      361 cgcgccgacc ttgtcgctgg tgacccaagg tttgatcgac cggccctgcg cgccgcttct
      421 gtgcatcaac ggcaaagacg acgaccagca tccgatcagt gatctctatc tgctggcgga
      481 gcatggcaga ccgaaagata tgcgcatcat cgccggcgcc ggccatatgg ggcggaaaaa
      541 ggatcagtcg aatgatcaag tggtcggcat cattaccgac tggctcagag aaaaattggc
      601 ttaacccgtt ttgaatatgg aatctgaaat ttaaaattcc gaatgaagcg aggatgatat
      661 ggcacgcatc gccacgatcg aaaggaaaga cgacctcaaa cccgaggatc agaaaatcta
      721 cgacgccatc gcccagagcc gcggcgcggt cggggggccg tggaaggcgc tgttgcatag
      781 cccggagatg gcctatcgga cgatgcacct gggcagctac gtgcgttttg aatcgacctt
      841 agatcataag gtcatcgaat ttaccgcgct ggtggcggcg cgcgagctcg actgcaagca
      901 tgaatgggcg gcccatgtga accatggcca gaaggctggt atcccgatgg acacaatccg
      961 cgccgtgtac cagaagaaag gcgcggagac gttttcctcg gaggacgcgc agatcgtcag
     1021 ctttgtccgc gaaatgattc atcaacatcg ggtgagcgag cccaccttcc aggcgatcca
     1081 cgcgcggttt ggcgacaagg gcatggtgga gttgtcggcg accatcggct attacgccat
     1141 gctcgcctgc acgctcaaca ccttcgatgt ctactcggtg acgccgccgg acgatttgaa
     1201 gatctgatac gacgtggcgc ggcgcgcgct tcacgtatta caagtttcag attacatatt
     1261 ccagattggg tcgtcgccgt tgacagaacc tacgatgggc ggatagtctc gaccggcaat
     1321 cgattcaatg gaagggattt tggctatgaa actcaaagat caagtggcgc tgattaccgg
     1381 cgccggtaga aacatcggca aggcgatggc caaactattt gccgccgaag gagcgaagat
     1441 cgttgtcgcc gagatgcatg aagggcgcgg ccaagcggtg gttgacgaga tcaataaatc
     1501 gggcggccag gcggcgctgg tcctgggcga tgtgtccaaa tcggcggacg tgcagcgcct
     1561 ggtcaaagaa gcggtgggta agtttggcgg catcgatatc cttgtcaaca acgcggcgtt
     1621 gaccgatcac gccaatattt tcgacagcac cgaagaagag ttcgacaa
//
LOCUS       DATIRS010000577         2318 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1910440, whole genome shotgun sequence.
ACCESSION   DATIRS010000577 DATIRS010000000
VERSION     DATIRS010000577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2318
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1910440"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..328)
                     /locus_tag="VLM90_07295"
     CDS             complement(<1..328)
                     /locus_tag="VLM90_07295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12804.1"
                     /translation="MQGVVDADTHIAEPEAMWQLIDERMAPRRPVLVELPEDTWFGDR
                     NALWLIDGQIFPKPAGKGSYRLVTPSAQKAEKGRGDIAIASREVANVEARVKDMDRLG
                     VDVQVIY"
     gene            500..1438
                     /locus_tag="VLM90_07300"
     CDS             500..1438
                     /locus_tag="VLM90_07300"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ12805.1"
                     /translation="MASTLITGLGLVGTSYAQHAIKRGDSVVFYDVAPRKDFLAHKLG
                     AANVTVVQRDVRDLPSLIETIQKHKCDTVIHTAGLIGGKVGNPIYAGMQINVMGTINV
                     AEAVRLTGVKRLVQISTFGVYDRRQGEPNPIDEGFRRGPGEAYGNSKVAKELMVEAYQ
                     RMFGFELIVLRLANVYGVGHFAGGSGGGEMVQNMLQTGIKGGVVKIAQEVARDFEYVY
                     YKDLGRALDKAVTTPLKEPATLNIGTGVVIPFDDLVATAEKLLPELQVEIIPGVKPRS
                     AKQPMVIDKAKQILGWSPDYDIVNGFKDYIGELKAL"
     gene            1820..>2318
                     /locus_tag="VLM90_07305"
     CDS             1820..>2318
                     /locus_tag="VLM90_07305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12806.1"
                     /translation="MNRSFRFSPSRVALGYIALGVVALASFALPLWNGWRVNISTFRV
                     YVQGEDVQRLVEIFDRGGAPALVTAMESQAGSVPEDQIMILADPSKQRLAGNLPSWPA
                     EVPDAAGTYGLVIGMGGGATMRVVASHMRLPGGYHFLIGRESVRFESLVERFWYGIAG
                     AMGVVL"
BASE COUNT          509 a          670 c          659 g          480 t
ORIGIN      
        1 gatagatcac ctgcacgtcg acaccgagcc ggtccatgtc tttgacgcgg gcctcgacgt
       61 tggcgacttc gcggctggca atggcgatat cgccgcgccc tttttccgcc ttctgcgccg
      121 acggcgtgac cagccgataa ctacccttgc ccgccggttt gggaaagatt tggccgtcga
      181 tcaaccacag ggcgttgcgg tcgccaaacc aggtatcttc cggcagctcc accaacaccg
      241 gccggcgcgg cgccatccgc tcgtcaatca actgccacat cgcctcgggc tcggcgatat
      301 gggtatcggc atcgactact ccttgcatac tgttattcct ccgtgggtcg cgaccattta
      361 ccttcctggg atatataccg gcgcaatcgc gttttgcaat cgacgagaaa accacctgac
      421 cgaagcaaac gcgaaatccg ctagactttt aacagccatt gcattaagtg aaacctaacc
      481 aaccgataaa ggagttcata tggcctcaac actgatcacc ggcttaggac tggtcggcac
      541 ttcctacgcg cagcatgcga tcaagcgcgg cgatagcgtg gtattttacg acgtcgcgcc
      601 gcgcaaagat tttttggcgc acaagctcgg cgccgccaac gtcaccgtgg tccagcgcga
      661 tgtccgcgat ttaccgtcgc tcatcgagac cattcagaaa cataaatgcg acaccgtcat
      721 ccatacggcg ggactgatcg gcggcaaggt cggcaacccg atctacgccg gcatgcagat
      781 caacgtcatg ggcacgatca acgtcgccga agccgtacgc ctcaccggcg tcaagcgcct
      841 ggtgcagatc agcacattcg gcgtctacga ccggcgccaa ggcgagccca atcccatcga
      901 cgaaggtttt cgccgcggtc cgggcgaagc ctacggcaac tccaaagttg ccaaggaact
      961 tatggtcgag gcttaccagc gtatgttcgg ctttgagttg atcgtcctgc ggctggccaa
     1021 cgtttacggc gtcggccact tcgccggagg ctccggcggc ggtgagatgg ttcagaacat
     1081 gttgcagacc ggcatcaaag gcggcgtggt caagatcgcc caggaagtcg cccgcgattt
     1141 cgaatacgtc tattacaaag atctcggccg tgccttggat aaggcggtaa ctaccccgct
     1201 gaaagaaccg gcgacgctca acatcggcac cggcgtggtc attcctttcg acgatctggt
     1261 cgccactgcc gagaagctac taccggaatt acaagtggaa attatccccg gcgtcaaacc
     1321 gcgctcggcc aaacaaccga tggtgatcga caaagccaaa caaattctcg gctggagtcc
     1381 cgattatgac atcgtcaacg gcttcaagga ttacatcggc gaacttaaag cactgtaaag
     1441 attcttgcac cgcgaagtga atcatgatct tacgcacgtg cacggataat gaaaatggcg
     1501 aaacccgtag gatgtggtga gtccgcggac cgcatcgagg gagcgcggct taccaacgat
     1561 gcggttccct ttggtccccc catcatacaa accgatgccc ggtattttcc aaggagcctg
     1621 cagacggatg taagcgcatg aacacttcgt ggagaaaaaa agttcggcgc gcctttcgtc
     1681 cgtgttcccg ttggccagcc actcggagaa aatatgatta cagatgagga tagtttaagc
     1741 gcgctgattg accgagtatt tttgagatag taggtttggc aaacctcgga atcatcgaga
     1801 ttaccggcat cgagcgcata tgaatagatc cttcagattt tccccttcac gagtggcact
     1861 cggttacatc gcgcttggcg tggtcgccct cgcttcgttt gcgctgccac tctggaatgg
     1921 ctggcgcgtg aacatctcga ctttcagggt atatgttcag ggcgaagacg tgcaaaggct
     1981 ggtggaaata ttcgacaggg gaggcgcgcc ggcgctggtt accgcgatgg agtcgcaggc
     2041 gggaagcgtg cccgaagacc aaatcatgat cctggctgac ccgtcgaagc agcggctcgc
     2101 cggcaactta ccgtcatggc cagccgaggt ccccgacgcg gcgggaacct atggattggt
     2161 gatcggcatg ggtgggggag cgacgatgcg ggtggtcgct tcgcatatga gattacccgg
     2221 tgggtaccat tttttaatcg gccgcgagag cgtccgcttc gagtccctgg tcgaacgctt
     2281 ctggtacggc attgccggcg ccatgggcgt cgttttgg
//
LOCUS       DATIRS010000578         4895 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1813256, whole genome shotgun sequence.
ACCESSION   DATIRS010000578 DATIRS010000000
VERSION     DATIRS010000578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4895)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4895)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4895
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1813256"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1745
                     /locus_tag="VLM90_07310"
     CDS             <1..1745
                     /locus_tag="VLM90_07310"
                     /inference="COORDINATES: protein motif:HMM:NF021424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HSQ12807.1"
                     /translation="PLDSLPWTSANDYPYIFPSDPTQPLPPLATHGQIRFQIDASKPV
                     DSTALRLDSSGAGQRTDTERVPGQHESAPWISRTAICAEARNGVLYIFMPPTAALEDY
                     LELVAAVEATAEALNQPVLFEGYEPPRDPRLPHFRITPDPGVIEVNIHPSSSWAESSE
                     QTAFLYEAARQSRLSTEKFMIDGRHTGTGGGNHFALGGATPADSPWLRRPDLLRSFLS
                     YWHNHPSLSYLFSGLFIGPTSQAPRIDEARNDSVREIEVAFRELERRLAANRGDCPPW
                     LIDRLLRHLLIDVTGNTHRAEFCIDKLYSPDSAAGRLGLLEMRAFEMPPHARMSLTQQ
                     LLIRALIARFWKTPYAPPRLARLGMELHDRFLLPHFIWLDFTDVITELNQAGYGFDAG
                     WFAPHFEFRFPKYGDFAVRGIELELRAALEPWHVLGEEGAPGGTARYVDSSLERVQVK
                     VTGLPPDRYTITCNEVALPLQSTGTVGEFVAGVRYRAWQPPSALHPTIGVHTPLTFDI
                     VDRWMNRSLGGCQYHVMHPGGRSYEVFPVNAFEAESRRLERFFRVGHTPGIMEIIEKR
                     IDPEFPFTLDLRKI"
     gene            1881..4382
                     /locus_tag="VLM90_07315"
     CDS             1881..4382
                     /locus_tag="VLM90_07315"
                     /inference="COORDINATES: protein motif:HMM:NF025761.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="circularly permuted type 2 ATP-grasp protein"
                     /protein_id="HSQ12808.1"
                     /translation="MNYPLNPDRYDEVFAAQGRPRGHWASLAQAATRAGRTALSHRAS
                     TIRRAVEQDGVTYNVYGDPKGTDRPWEVDLLPFVISAQEWQFLAKGVAQRAQLLNLVL
                     ADLYGDNRLLAEGLIPPAIIHGHHNYLWPCRGIEPPGGTFLHLYACDLARSPDGRWWV
                     MGDRTQGPSGAGYAVQNRLIVTPLYENIFRSLGVQRVANFFRTLQQQLAALAPTDGEE
                     PLVALLTAGPYNETYFEHVFLARYLGFPLVEGSDLTVRDNRVYLKTLQGLKLVHGLLR
                     RLDDEYCDPATLRADSALGVAGLISAARAGNVLIANALGSGVLESPGLLGFLPAICES
                     LLGERLALPSVATWWCGEAPALKHAIDHLPELVIKPVFPSMKIEPTFGHDLDSAARVA
                     MVERLRATPHAFVAQEWVRLSQAPAWSNETQQFEPRVVGLRLYATAKGDGYEVMPGGL
                     ARVAPESAVEVVTIQRGGSSKDVWVLGDDATPWQSLLVPRLGARNIVRGGFYSPSRAV
                     ENLFWMGRYTERVENVGRLLRAVGQRLAESDPAHLATLKVLTRLSDKARLREPSENAS
                     SLTPAAKKLPVSLGPEWVIAATGDPKVLNGVPANTARLLFCATQLRERMSLDHWRTVQ
                     RLAHVHEPTPQSLEASLAILDRIIPACTALAGYALDDMTRDDAWRFLVIGRDLERMAF
                     LSSAAMQVLGLPDEDSDTVLGALLEIGNVSMTYRARYQRHPELIPVLDLLVLDESNPH
                     SVCFQLAALYNHLNQIWAQLAFRPVNDPASLLLALREFDLVELEGPHVSQDKPGEPLA
                     ALLTACESCVYGLSDELTQRFFIHAGEHPQTSVAA"
     gene            4379..>4895
                     /locus_tag="VLM90_07320"
     CDS             4379..>4895
                     /locus_tag="VLM90_07320"
                     /inference="COORDINATES: protein motif:HMM:NF019977.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase N-terminal domain-containing
                     protein"
                     /protein_id="HSQ12809.1"
                     /translation="MSQNSARRYRVEHHTAYRYSEPVMLSHQQLHLTPRPLNYQPIQA
                     HEVVIKPAPTQQRKIIDAFGNPVIEIAIEAAHASLDVIAHSTVTVTERPMIDPEETPS
                     WETVHDALAYRALWHPEPAILEATQFLFESAYARVKRTLRAYAGDCFEPGRPILAAAA
                     ALMAKIHGEFKF"
BASE COUNT          912 a         1564 c         1439 g          980 t
ORIGIN      
        1 tgccgttaga ctcgttgccg tggaccagcg ccaacgacta cccctatatt tttccatcgg
       61 atcccaccca gccgctgccg ccgcttgcga cgcacgggca aattcgcttt cagattgacg
      121 caagtaagcc ggtcgatagc accgcattga ggcttgacag cagtggcgcg gggcagcgca
      181 ctgataccga gcgggttccc ggccagcatg aaagcgcgcc atggatctcg cgcacggcaa
      241 tctgcgctga agcgagaaac ggcgtgcttt acatcttcat gccgccgacc gccgccctgg
      301 aagattatct cgaactcgtt gccgccgtgg aagcgaccgc ggaagcgctg aatcagccgg
      361 tcctatttga aggctacgag ccgccgcgcg atccgcgcct gccgcacttt cgcatcactc
      421 ccgacccggg cgtgatcgag gtcaacattc atccttcgtc gagttgggcc gagtcaagcg
      481 aacagacggc gtttctctac gaggcggcgc gccagtcgcg tctatcgacg gaaaaattca
      541 tgatcgatgg ccgccacacc ggcaccggag gcggcaacca cttcgcgctc ggcggcgcca
      601 cgccggcgga ttcgccctgg ctccggcggc cggatctctt gcgcagcttt ctcagctatt
      661 ggcataatca tccgtcgctc tcttatcttt ttagcgggct gttcatcggc ccgacctcgc
      721 aggcaccgcg catcgacgaa gcgcgcaacg attcggtcag ggagattgaa gtggcgttcc
      781 gcgagctgga gcggcgcttg gctgcaaacc gcggcgattg cccgccctgg ctgatcgacc
      841 ggctcctgcg ccatctgctc atcgacgtca ccggcaatac ccaccgggcc gagttctgca
      901 tcgacaaact ctactctccc gacagcgccg ccggacgctt gggattgctg gagatgcgcg
      961 cctttgagat gccgccgcac gcgcgcatga gcctgacgca acagttgttg attcgagcgc
     1021 tgatcgcgcg cttctggaaa accccatacg cgccgccgcg attagcccgc ttgggcatgg
     1081 aactgcacga tcgctttctg ctgccgcatt tcatttggct cgattttacc gatgtgatca
     1141 ccgagttgaa tcaagccggt tacggcttcg atgccggctg gtttgcgccg cacttcgaat
     1201 tccgctttcc caagtacggc gactttgccg ttcgcggtat cgagctggaa ttgcgcgcgg
     1261 cgctagaacc ttggcatgtg ctgggcgaag agggcgcccc tggcggcacg gcgcgctacg
     1321 tcgactcgtc gctggaaaga gtccaagtca aagtgactgg gctgccgccc gatcgctata
     1381 cgatcacctg caatgaagtg gcgctgccgc tgcaatcgac ggggaccgtc ggcgaattcg
     1441 tcgctggcgt gcgttaccgc gcctggcaac cgccatcggc cttgcatccg accatcggcg
     1501 tgcacactcc gctcaccttc gatatcgtcg accgctggat gaatcgcagc ctcggcggct
     1561 gtcaatatca tgtcatgcac cctggcgggc gcagctatga agtctttccc gtcaacgcct
     1621 tcgaagccga gagccgccgt ctcgaacggt tcttccgcgt cggtcacacg ccggggatca
     1681 tggaaatcat cgagaagcgc atcgacccgg agtttccctt caccctcgat ttgcgtaaaa
     1741 tttaatctgg cgcaggtaaa gtcaacgagt tattctgtgc tgacaattga tttttctagg
     1801 ccctcggatg tcaccttgat tcaaccgatt gccgatccag acagcaccat ttctgaggca
     1861 tggcacgtgc acgagcattt atgaattacc cgctgaaccc cgatcgttac gatgaagttt
     1921 tcgcagccca aggtcgaccg cgcgggcatt gggcaagttt ggcccaagcg gcaacgcggg
     1981 ccggccgcac ggcattgtcg caccgcgcca gcacgattcg ccgcgccgtc gagcaggacg
     2041 gcgttaccta caatgtctat ggcgatccca agggaaccga ccggccgtgg gaagtggacc
     2101 tattgccgtt cgtgatctcg gcgcaggaat ggcagtttct tgccaaaggc gtagcccagc
     2161 gcgcgcagct gctaaatctc gtgctcgccg acttatacgg cgacaaccgc ctgctcgccg
     2221 aagggctcat cccgccggcg attattcacg gtcatcacaa ttacctatgg ccctgccgcg
     2281 gcatcgagcc gccgggcgga actttcctgc acctttatgc ttgcgatctc gcgcgctcac
     2341 ccgatggccg ttggtgggtc atgggcgatc gcacccaagg cccctcgggg gcgggttatg
     2401 cggtgcaaaa ccggctcatc gtaacgccct tgtacgaaaa tatctttcgc tccctgggcg
     2461 tgcaaagggt ggctaatttt tttcgcacgc tgcagcaaca actcgctgcg ctcgcgccca
     2521 ccgatgggga agagccgcta gttgccctgt tgacggcggg gccatacaac gaaacctatt
     2581 ttgagcatgt ttttctggcg cgctatctgg gcttcccgct ggtcgaagga tcggatctga
     2641 cggtgcgcga caaccgggtc tatctgaaaa cattgcaagg attgaagctc gtccacgggc
     2701 tcttgcgccg tctcgacgac gagtactgcg atccggccac cttgcgcgcc gactcggccc
     2761 tcggcgtcgc cggcctgatc tcggcagcgc gcgcgggcaa tgtgctgatc gccaatgcgc
     2821 tgggctccgg cgttctcgaa tcgccggggt tgctcggctt tttgccggcg atttgcgaga
     2881 gcctgctcgg cgagcggctg gccttgccgt cggtggcgac ctggtggtgc ggcgaagcgc
     2941 cggcgctcaa gcacgcgatc gaccatctcc ccgagctggt catcaagccg gtcttccctt
     3001 cgatgaaaat cgaaccgact ttcggccacg acctcgatag cgccgcgcgc gtagccatgg
     3061 tggagcggct gcgcgccacg ccccacgcat tcgtcgctca ggaatgggta aggctctccc
     3121 aggcacccgc ctggtcgaac gagactcagc agttcgaacc cagggtcgtc ggcttgcggc
     3181 tttatgcgac cgccaaaggc gatggctatg aagtcatgcc cggcgggctc gcccgcgtcg
     3241 ctccggaatc ggccgtcgaa gtcgttacca tacagcgggg cggttcgagc aaagacgtct
     3301 gggtactcgg cgacgacgct acgccgtggc aatcgctgct ggtgccgcgg ctcggcgccc
     3361 gcaatattgt ccgcggcgga ttttattcgc cttcgcgagc ggtggaaaat ctgttttgga
     3421 tggggcggta cacggagcgt gtggaaaacg tcggacgctt gttgcgcgcc gtcggtcaac
     3481 gactcgccga aagcgatccc gcgcatttgg cgacgctcaa agtgctgact cgcttgtcgg
     3541 acaaagcgcg cttgcgcgaa ccgagtgaaa acgcgagttc gttaacaccg gccgcaaaaa
     3601 aattgccggt cagcttaggc ccggagtggg tgattgccgc gaccggggac ccaaaggttc
     3661 tcaacggcgt cccggccaac accgcgcgcc tgctcttctg cgcgacccaa ctgcgggaac
     3721 gcatgtcgct cgatcattgg cgcaccgtac aacggctcgc tcatgtccac gaacctacgc
     3781 cgcaaagcct ggaagcatcg ttggcgattc tcgaccggat cattcccgcc tgcacggctc
     3841 tggcgggcta cgcccttgac gatatgaccc gggatgacgc ctggcgcttt ctggtgatag
     3901 gacgagattt ggagcgcatg gcatttctca gctcggcggc gatgcaggta ctcgggctgc
     3961 cggacgaaga tagcgatacc gtgctcggcg cgttattgga aatcggcaac gtcagcatga
     4021 cctatcgggc gcgctaccag cgccatcccg aattgatacc ggttctcgat ctgttggtgc
     4081 tcgacgaatc gaacccgcac tcggtctgtt ttcagttggc ggcgctctac aaccatctga
     4141 atcaaatctg ggcacagctg gcattccggc cggtcaacga cccagcgtca ctgctgctgg
     4201 cgcttagaga attcgatctg gttgaattag aaggtccgca cgtgtcccaa gataaaccgg
     4261 gcgaaccgct cgccgctctg ctgaccgctt gcgaaagctg cgtctacggc ctgtccgatg
     4321 agcttaccca acgttttttt attcacgccg gcgagcaccc gcagacgagc gtggcggcat
     4381 gagtcaaaac agcgcgcgcc gttatcgagt cgaacaccac accgcctacc ggtactcgga
     4441 gcctgtgatg ctgtcccatc agcagctcca cttgacgccg cggccgttaa actaccaacc
     4501 gattcaagcc catgaagtcg tcatcaaacc ggcgccgaca caacagcgca aaataatcga
     4561 tgcctttggc aatccggtga tcgagatcgc catcgaagcg gcgcacgcca gcttggatgt
     4621 catcgcccac tccaccgtga ccgtcaccga acggcctatg atcgatccgg aggaaacgcc
     4681 ctcctgggag accgttcacg acgccctcgc ttatcgcgct ctctggcatc ccgagccggc
     4741 gatcctcgaa gccacacagt ttctcttcga atccgcctac gcccgggtga aacgcactct
     4801 ccgggcctat gccggcgatt gttttgaacc gggcaggccg attttagcgg ccgcggcggc
     4861 actgatggcg aaaattcacg gcgagtttaa attcg
//
LOCUS       DATIRS010000579         1791 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_928119, whole genome shotgun sequence.
ACCESSION   DATIRS010000579 DATIRS010000000
VERSION     DATIRS010000579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1791)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1791)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1791
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_928119"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..641
                     /locus_tag="VLM90_07325"
     CDS             <1..641
                     /locus_tag="VLM90_07325"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HSQ12810.1"
                     /translation="SPHHQQIVRLDRESREPIHAATLKRLREFILDRAERCDGVVISD
                     YGKGAVHAELLSALGARVGKRKIVCVVDPKKENFSRYRFPTLITPNKSEAADAAGIDI
                     RDDKTLHAAGSKLLRQWRAQGVLITRGADGMSLFRPRCKPSHFSTEPRDVFEVTGAGD
                     TVVAVCALVLACGGDFAAAAVIANVAAGFVGDEIGTVAVPFNKLKSRIEELS"
     gene            638..1498
                     /locus_tag="VLM90_07330"
     CDS             638..1498
                     /locus_tag="VLM90_07330"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HSQ12811.1"
                     /translation="MKSMTGYGEASQNIHGVRITVQIRSVNHRHLDLQVRTPREYMSF
                     EEEIRKLLREKISRGRVDLFVNRYAAKGQARKLEMDEALIGQFLSGVAQLKKKYQLGG
                     EVDVALVSNIPDVFHVREVEIDSKSERQAVLKALNGALKKLEQSREREGTHLRTDMES
                     QIAHLREIAAGLESRAAENGARQLKGAGPDGPNGEKPERNNPDAASAVAKGDINEELV
                     RLKTHVAALAKVAREREPVGKKVDFMLQEINRELNTISSKVPYLPVTQLVLQGKERVE
                     KIREQTQNIE"
     gene            1495..>1791
                     /locus_tag="VLM90_07335"
     CDS             1495..>1791
                     /locus_tag="VLM90_07335"
                     /inference="COORDINATES: protein motif:HMM:NF012832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12812.1"
                     /translation="MKARVHQLAKRQGIIFILSAPSGAGKTTLYNGLRKNYPDIQLSV
                     SCTTRRQRRGEVAGTDYHFLSDRQFDALKRRGEFAEWAQVHDYCYGTPRKPIERA"
BASE COUNT          420 a          512 c          533 g          326 t
ORIGIN      
        1 ccagcccgca tcatcaacag attgtgcggt tggatcgcga gagccgggag ccgattcatg
       61 ccgcgaccct gaaacggctg cgcgaattta tcctcgaccg cgccgagcgt tgtgacgggg
      121 tggtgatctc ggactacggc aaaggagccg tgcacgctga acttttgtcg gcgcttggcg
      181 cccgggtcgg caaacggaaa atcgtctgcg tggttgaccc caaaaaagaa aacttcagcc
      241 gttatcgttt ccccaccctg ataaccccca acaaaagcga agcagcggac gcggcgggaa
      301 tcgatattcg cgacgacaag acgctgcacg ccgccgggtc aaaattgttg cgccaatggc
      361 gcgcccaagg cgtgctgatt acccgcggcg cggacggcat gagtttgttc cgaccgcgct
      421 gcaagccgag tcatttttcc accgagcctc gggatgtttt tgaggtcact ggagccggcg
      481 atacggtggt ggcggtctgc gctctggtgt tggcctgcgg cggcgatttt gcagctgccg
      541 cggtaatcgc caatgtggcg gcagggtttg tcggtgacga aatcggcacg gtggcggtgc
      601 ccttcaacaa gctcaagtcg agaatcgagg aattatcatg aaaagcatga ccggttatgg
      661 cgaggcgtcg cagaatattc acggcgtcag gatcaccgtg cagattcgca gcgtgaatca
      721 tcggcacctc gatctccagg tccgcacgcc gcgcgaatat atgtccttcg aggaagaaat
      781 ccgcaagctt ctgcgcgaaa agatttcccg cggccgcgtc gacttgttcg tcaatcgcta
      841 cgcggccaag ggacaagcgc gcaaattgga gatggacgaa gcgttaatcg gtcaattcct
      901 ttccggcgtt gcgcagctca aaaaaaaata ccagcttggc ggcgaagtcg atgtcgcgct
      961 ggtttccaac attcccgacg tgtttcatgt gcgcgaggtc gaaatcgaca gcaagagcga
     1021 gcggcaggcg gtgctcaagg cgctcaacgg cgccctcaag aaactcgaac agtcgcgcga
     1081 gcgcgaaggc acccatctgc gcaccgatat ggaatcgcaa atcgcccacc tgcgcgaaat
     1141 cgccgcgggt ttggagtcac gggcggccga aaacggcgcg cgtcagctaa agggcgccgg
     1201 cccggacggg cccaacggcg agaagccgga gcgaaacaat ccggatgctg ccagcgccgt
     1261 cgccaaaggc gatatcaacg aagaactggt gcgcttgaaa acccatgttg cagcgctcgc
     1321 caaggttgcc cgcgaacggg agccggtggg taaaaaggtc gacttcatgc tccaggaaat
     1381 caatcgtgag ctcaacacca tcagctccaa ggtgccctat ttgccggtga cccagttggt
     1441 gctgcagggc aaagaaaggg tcgagaagat tcgcgaacaa acccaaaaca tcgaatgaaa
     1501 gcacgtgtac atcaactggc caaacgtcag ggaattattt ttattctttc cgcaccttcc
     1561 ggagccggga aaacaaccct ttataacggc ctacggaaaa actacccgga tatccagtta
     1621 tcggtgtctt gtaccacgcg tcggcaacgc cgcggcgagg ttgctggaac cgactaccac
     1681 tttctcagcg atcgtcaatt cgacgcgctg aaacgacgcg gcgaattcgc cgaatgggct
     1741 caggtgcacg actattgcta cgggacaccg cgaaagccca tcgaacgcgc t
//
LOCUS       DATIRS010000580         2110 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1518334, whole genome shotgun sequence.
ACCESSION   DATIRS010000580 DATIRS010000000
VERSION     DATIRS010000580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2110
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1518334"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..726
                     /locus_tag="VLM90_07340"
     CDS             <1..726
                     /locus_tag="VLM90_07340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12813.1"
                     /translation="TGINIMKATLTRLQDYETKNRGQFTDIVQYNRALALERLREYDQ
                     AAALYRKVAETEGRLGSEAAKNAEILDNFLRIFDRTIPTDDPFKYIAGLDEKVAAWNG
                     LIKKHSGTPYEFLARVEEERIDRAKVAFVEANRLRLKEGNQLTILGYSQLITKHQQSK
                     NYQRYLLDFGDFYMILAKDYAAQYDPEGLAFDLNLLDQFAKAALKFYSEVAQTDGVME
                     KLEAQAKIEATRGYLEKLTRLNR"
     gene            723..>2110
                     /locus_tag="VLM90_07345"
     CDS             723..>2110
                     /locus_tag="VLM90_07345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12814.1"
                     /translation="MRFHRTRLITAALIAALSLTGVPAVGQAQTRELDLERILNPMPD
                     YDPFETPASAPQFFPDAVDKRVRELLIDTLTYRNPALSDHLTFLKNEDTRLQKEQRSS
                     TGLTERAQDLVNNTIQDREKNLAAYREALRNASSPERKKYLESVLNRDDHFQSEQLMR
                     QSSTNFWGGMVNRLLNSVDLVGVASGNYIGAAAETAISQLYALMDRDMPMEERRALAR
                     DLDHLKRYPDDPKNPQVRKQVEALDKKKRAVLVAKQLAKAKEALNKGDEDRALFHAQV
                     AGFFDPQSQDAAKLRQQSAQLLGERQAARQKSLTARQEESFSLEQQADAEKLLVALSL
                     RDTILIQRVAIDTEKKHPSKPLADAARDAEAVALEMKGWHEAARKAVEQNARKATTPV
                     AKERANILLRSPDYNRLAIFHDARTERQLESVKYVLLGEDFLRKNMLFAAGAMAAAGP
                     GGAATLGMANAL"
BASE COUNT          532 a          649 c          568 g          361 t
ORIGIN      
        1 accggtatca acatcatgaa ggcgacattg acccgcctgc aggactacga aaccaaaaac
       61 cgcggccagt ttaccgacat cgttcaatac aaccgggcgc tcgcgctgga acgtttgcgc
      121 gaatacgacc aagccgccgc gctctatcgc aaagtcgccg aaaccgaggg tcgcttgggc
      181 agcgaagcgg ccaagaatgc cgagatattg gacaacttcc tgcgcatctt cgaccgcacg
      241 attcccaccg acgatccatt caagtatatc gctggcctcg acgagaaagt agcggcctgg
      301 aacggcctga tcaagaaaca ttcaggcacg ccctacgaat ttctcgcgcg cgtcgaagaa
      361 gaacgcatcg accgcgccaa ggtcgccttc gtcgaagcca accgccttcg cttgaaggaa
      421 ggcaaccaat tgacgatcct gggctatagc caattgatca ccaaacatca acaaagcaag
      481 aactatcagc gctatcttct cgacttcggc gacttctaca tgatacttgc aaaagactat
      541 gccgcccagt acgatcccga ggggttagcg ttcgatttaa acctgttaga tcaattcgcc
      601 aaagccgcgc tgaagtttta cagcgaggtc gcgcaaaccg acggcgtgat ggagaaactt
      661 gaagcccaag cgaagatcga agccacccgg ggctacttgg aaaagctcac gagactcaat
      721 cgatgagatt tcatagaacc cgcctaatta ccgccgcgct gattgccgcc ttgagcttga
      781 ccggcgttcc agccgtgggc caggctcaaa cacgcgagtt ggacttggaa agaatcttga
      841 acccgatgcc cgactatgac ccctttgaga cgccggccag cgcgccgcag ttcttccccg
      901 acgcggtcga taaacgggtg cgcgaattgc tgatcgatac cttgacctat cgcaacccgg
      961 ccttgagcga tcatctcaca tttttgaaga atgaagacac ccggctgcag aaggagcagc
     1021 gcagcagcac tggtctaacc gagcgcgccc aggatctggt caacaacacg attcaagacc
     1081 gcgagaagaa tctagcggcc taccgtgagg cgctgcgcaa cgcttcgtcg ccggagcgga
     1141 aaaaatatct ggaatcggtg ctcaaccgcg acgatcactt tcagtctgag cagctcatgc
     1201 gccagagctc gaccaatttt tggggcggca tggtcaatcg cttgttgaat tcagtcgacc
     1261 tcgtcggcgt cgcgtcgggc aattacatcg gcgccgccgc cgagaccgcc atcagccagc
     1321 tgtacgccct gatggatcgc gacatgccca tggaagagcg gcgcgccctg gcccgcgacc
     1381 tcgatcattt gaagcgctat cccgacgatc caaaaaaccc gcaggtgcgc aaacaggtcg
     1441 aagctctcga caagaaaaaa cgtgccgtcc tggtcgccaa gcagctcgcc aaggcgaaag
     1501 aggccttgaa caaaggcgac gaagaccggg cgctgtttca tgcccaagtg gcgggattct
     1561 tcgatccgca gtcgcaggat gccgcaaagt tgcgccaaca gagcgctcag ctcctgggtg
     1621 aacgccaagc cgcccgccaa aaatccctca cagcgcgcca agaggaaagc ttcagcctag
     1681 agcaacaagc cgacgcggaa aaacttttgg tagccctgtc cttacgcgat accattttga
     1741 tccaaagggt cgccatcgac accgagaaaa aacatcccag caagccgctt gccgacgccg
     1801 cccgcgacgc ggaagcggtc gccttggaaa tgaagggatg gcacgaagcg gcgcgaaaag
     1861 ccgttgagca aaacgcccgt aaagcgacga caccggtagc caaagagcgc gccaacatcc
     1921 tactgcgaag ccccgactac aatcggctgg cgatctttca tgatgcccgc accgagcggc
     1981 agctggagtc ggtaaaatac gttctgcttg gcgaagactt cctgcgcaaa aatatgctgt
     2041 tcgccgccgg cgccatggcc gccgccggtc ccggcggcgc cgcgacttta ggcatggcca
     2101 acgccttgat
//
LOCUS       DATIRS010000581         2189 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_42795, whole genome shotgun sequence.
ACCESSION   DATIRS010000581 DATIRS010000000
VERSION     DATIRS010000581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2189
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42795"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..714)
                     /locus_tag="VLM90_07350"
     CDS             complement(<1..714)
                     /locus_tag="VLM90_07350"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12815.1"
                     /translation="MKYHCISADSHLEIRPDRYAKRVPEKFRDRAPKVITLEEGSLAV
                     LQEGQPLERLISNISCGLPYEERRPFDPLPGENYENSPGTGSPEQRLREQERDGVDAE
                     VLFPGNVGPGFWRGIRNDEAYKSVVRAYNDWLAEEYCSFSPERLIGVGVIPITNITDA
                     VAELQHCKRIGLKAVAIDNFPAGNRQPTAADDPFWAAVVDLQMALTIHVEFGFPRRGR
                     GQPAVAAPSFKYAKQTDPEH"
     gene            1003..2040
                     /locus_tag="VLM90_07355"
     CDS             1003..2040
                     /locus_tag="VLM90_07355"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12816.1"
                     /translation="MLTQMLTIDADAHVLETEQTWEYMDGSDKKYRPKLVGATEGDSK
                     DEYWLVDGTLRLKSGNVGRNTPQASREMRDVPTRIEHMDELGVRIQVLYPTLFLIPLS
                     PRPEVELALCRSYNRWLADIWKQEPERLRWAAVVPLMSMEQTLAEMRFAKENGACAIF
                     MRGTEGDRLLSDPYFFPLYEEAQRLDIAIGVHAANGSATLYNYYKYESVGFSKFKLNC
                     VGGFHSMVMDRIPDRFPKLRIGFLEISAEWLPYTFTDLKKRFRLKNKELHADFLKQDR
                     IFVACETTDDIPYIVSKLGEDNIVIGSDYAHADSATELMAIHNLSADPRLTPALAKKI
                     VSDNARALYGL"
BASE COUNT          469 a          667 c          637 g          416 t
ORIGIN      
        1 gtgttcagga tcggtctgct tggcgtactt gaatgagggc gccgccaccg ccggctggcc
       61 gcggccgcgc cgcggaaaac cgaactcgac gtgaatcgtc aaggccattt gtaaatcgac
      121 caccgcggcc cagaatggat cgtccgccgc cgtcggctgg cggttgccgg cgggaaaatt
      181 gtcgatcgcc accgccttga gaccgatgcg cttgcagtgc tgcagctcgg cgacggcatc
      241 ggtgatgttg gtgatcggaa tcacgccgac accgatcagg cgttcagggg aaaaagagca
      301 atattcctcg gcgagccaat cgttgtaggc gcgcaccacg gacttatacg cctcatcgtt
      361 gcgaatgccg cgccagaagc cggggccgac gttgccggga aacaacactt cagcgtcgac
      421 accgtcccgc tcctgctcgc gcaaacgttg ctcgggcgag ccggtgccgg gagagttttc
      481 ataattttca ccaggcagcg gatcgaaggg gcgccgttct tcatagggca gcccgcaaga
      541 tatattggag atcaaacgct ccaacggctg gccttcctgc agcaccgcga gggagccttc
      601 ttcgagagtg atcaccttgg gcgcgcggtc gcgaaacttc tccggcaccc gcttggcgta
      661 acggtcggga cgtatttcca ggtgggagtc ggcggaaatg cagtgatact tcataaatcc
      721 tcgcgtcagt cggtcagcgc tcggattaca ccggcgcacc ggggttgtca acgtgcgccg
      781 gcaattgctg gtggttcagt ttaattttga cgtcgcatct caatgtaggg gccgacctgc
      841 gtgtcggccc tccgaatggg cggacacata ggtccgcccc tacaaatctt ggcgaaactg
      901 aaccatcttc cggcaaatcc cctgccggcc ctgcgacttg aattccgccg ccatcggaga
      961 gtatgtaatt tttacctcac ccgcgcgcga aaggatttgc caatgttgac ccagatgtta
     1021 accattgacg ccgacgccca tgtcctggag accgaacaga cctgggagta tatggacgga
     1081 tccgataaga aatatcggcc caaactcgtc ggcgccacgg aaggagactc caaggacgaa
     1141 tactggctgg tcgacggcac gttgcgcttg aagtccggca acgtcggccg caacacgccg
     1201 caggcctccc gtgagatgcg cgacgtgcca acccgcatcg aacatatgga cgagttgggc
     1261 gtgcgcattc aagtgctcta cccgacgttg tttctcattc cgctctcgcc gcgcccggaa
     1321 gtcgagttgg cgctctgccg cagctacaac cgctggctcg ccgatatctg gaagcaagag
     1381 ccggaacgat tgcgctgggc tgccgtggtg ccgctgatgt cgatggagca aaccctcgcc
     1441 gagatgcgct tcgccaagga aaatggcgcc tgcgcgatct tcatgcgcgg caccgagggc
     1501 gaccgcctgt tgagcgatcc gtacttcttc ccgctctacg aagaggccca gcgcttggac
     1561 atcgccatag gggtccacgc cgccaacggc agcgcgacgc tgtataacta ttataaatac
     1621 gaaagcgtcg gcttctctaa gttcaagctc aattgcgtcg gcggctttca ctccatggtg
     1681 atggaccgca tccccgaccg cttccccaag ctgcgcatcg gcttcttgga aatcagcgcc
     1741 gagtggctgc cctacacctt caccgatttg aaaaaacgct tccgcctgaa gaataaagaa
     1801 ctccacgccg acttcttgaa gcaggatcgc atcttcgtcg cctgcgagac caccgacgat
     1861 attccctaca tcgtcagcaa gttgggcgaa gacaatatcg tcatcggctc cgactacgcc
     1921 cacgccgaca gcgccaccga gttgatggcg atccacaatc tcagcgccga cccgcgcctg
     1981 acgcccgcgc tggcgaaaaa gatcgtcagc gacaacgcca gggcgctgta cgggttgtaa
     2041 agaaggaaaa gttcaccaga gacgaccgag tagaagaatc ggattcggga gattggccgc
     2101 acccttcgac cgtgctcagg gcgatcgggg cgcatggaac tcaaaaaatg aattctgaaa
     2161 cgtaaggacg ggtttgaatg ccgcccgct
//
LOCUS       DATIRS010000582         2227 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_928288, whole genome shotgun sequence.
ACCESSION   DATIRS010000582 DATIRS010000000
VERSION     DATIRS010000582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2227)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2227)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2227
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_928288"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..491
                     /locus_tag="VLM90_07360"
     CDS             <1..491
                     /locus_tag="VLM90_07360"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HSQ12817.1"
                     /translation="SKIAMSGVCQTGRQPILAAAKRNIFSAAVVLYGAVYDADWKSHP
                     LRPEPIDKLMQEISCPLTAVFGELDNLIHRDNIVRMFTVLAQAKKSFDIRIYADAPHG
                     FLNDTMPGRFRAPQAEAAWNQITSFLGSAFAGEWKKDRAIWRFDADTSVNYDFATMKR
                     WE"
     gene            704..1489
                     /locus_tag="VLM90_07365"
     CDS             704..1489
                     /locus_tag="VLM90_07365"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSQ12818.1"
                     /translation="MTTNRWWQRSRELVSDWLGVIGVISFFGAWEIATRFGILNPFYF
                     PPFSVIIAKGYELFANGSIWEHMWFSLTNFAVGFVISVLLGVLLGIPMGWYKNVCKTL
                     DPLLSGIYATPLIALLPLIIMMFGLGAVSKIIMTILAAVFPILINTMVGIANTDHRLI
                     TMARSFGAKDNQIFRKVSLPGSLPYIVAGMRVALGRALVYIVVAEQYGAATGLGYLSS
                     VAAQRFQMAAMFVPIVIITGLGAGFNELLKSIERRLEKWKPQK"
     gene            1434..>2227
                     /locus_tag="VLM90_07370"
     CDS             1434..>2227
                     /locus_tag="VLM90_07370"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12819.1"
                     /translation="MSCSNPSNGVWKNGSRKNSRRIIECRDYFAQINYDQEESMRAAL
                     RTGTIIIALSMIPLALTGSSQVDAQSPKMTVGQTGTNPGTALFFIAQKEKFFVKHGLD
                     VNIIKSNTAAAVQAMLSGSMHMATGSGAAAFTTATIEGAPPFVLVSSWVNVFPYKVMA
                     LKEIAKVEDLKGKTGHVGAPFGTIPDTALRFALTKLKLDPEKDVKLVQSANADPAAIL
                     ASMDKGDVQFGILTAPFDRVAERRGYRTLLALPELGIPWQQNGEWV"
BASE COUNT          479 a          654 c          612 g          482 t
ORIGIN      
        1 tgagcaagat cgccatgtcg ggcgtatgcc agaccggccg tcagcccatc ttagccgcgg
       61 ccaagcgcaa cattttcagc gccgccgtgg tgctctacgg cgcggtttac gacgccgact
      121 ggaaatccca tccgcttcgg cccgaaccca tcgacaaact catgcaagag atctcgtgcc
      181 cgctgaccgc ggtcttcggc gagctggata atttgattca ccgcgacaac atcgtgcgca
      241 tgtttaccgt gctcgcccag gcgaaaaaga gtttcgatat ccgcatctac gccgacgcac
      301 cgcacggttt cttgaatgac accatgcccg gccgctttcg cgccccgcaa gcggaggcgg
      361 cgtggaatca gatcacatcg tttttgggct cggcctttgc cggcgaatgg aaaaaagatc
      421 gcgccatctg gcgcttcgac gccgacacct cggtcaacta cgatttcgcc acgatgaagc
      481 gttgggagta gtcggcgcgt tgcgccgaat ctcaaatcac acattccaga ttccacctcg
      541 atcattttct ggcattggag atttgaaatg cgcgcagcgc cacgcgcgcc ttgacagtca
      601 aatcttgggc gaataaagtc ggctcactca aatctgagga gttcttacgg caaagaacga
      661 gcaagaggcc ttcgatctcg tctccgtcga cgagtcgaat ccgttgacca ccaatcgctg
      721 gtggcaacgc tcccgcgagt tagtctcaga ctggctgggc gtcatcggcg taatatcgtt
      781 tttcggcgcg tgggagattg cgacccgctt cggaattctc aatcctttct actttccgcc
      841 gttcagcgta atcatcgcca aaggctacga gctattcgcc aacggctcca tatgggagca
      901 catgtggttc agcctgacaa attttgccgt cggcttcgtc atctctgttc tgctcggtgt
      961 gctgctcggt ataccgatgg gctggtacaa aaacgtctgc aagaccttgg acccgctctt
     1021 gtccggcatc tacgcgacgc cgctgatcgc gctgctgccg ttgatcatca tgatgttcgg
     1081 cctcggcgcg gtttcgaaga ttatcatgac gattctcgcc gccgtgtttc cgattctgat
     1141 caacaccatg gtgggcatcg ccaacaccga tcaccgcctg atcactatgg cgcgctcctt
     1201 cggcgccaaa gacaaccaga ttttccgcaa agtttcattg ccgggctcgc ttccctatat
     1261 cgtcgccggg atgcgcgtcg ccttgggacg ggctctggtt tatatcgtcg tcgccgaaca
     1321 atacggcgca gcgaccggcc tgggatattt gagctccgta gccgcgcagc gcttccagat
     1381 ggcggcgatg ttcgtgccga tcgtcattat caccggcctc ggcgccggct tcaatgagtt
     1441 gctcaaatcc atcgaacggc gtctggaaaa atggaagccg caaaaatagc cgtcgcatca
     1501 tcgaatgtcg ggactatttc gcgcaaatta actacgatca ggaggaaagc atgagagcgg
     1561 cgttgagaac aggaacgata attattgcgt tgtcgatgat ccctcttgca cttacagggt
     1621 cgtcgcaagt ggacgcccag agcccaaaaa tgaccgtcgg tcaaaccggc accaatccag
     1681 gcaccgcgtt gttcttcatt gcccaaaaag agaagttctt cgtgaaacat gggctggacg
     1741 tcaacatcat caaatcaaac acggccgccg cagtgcaagc gatgctcagc ggcagcatgc
     1801 acatggcgac cggatcggga gccgctgcct tcacgacggc gactatcgaa ggggcgccgc
     1861 cttttgtcct ggtgagctct tgggtgaacg tctttccgta caaagtgatg gcgctgaagg
     1921 agattgcgaa agtcgaggat ctcaagggga aaaccggcca cgtgggcgct ccgttcggga
     1981 ccatacccga caccgcgttg agattcgctc tgaccaagct gaaactggat ccggaaaaag
     2041 acgtaaagct cgtgcaatcc gctaacgccg acccggcggc gatcctcgct tccatggata
     2101 aaggcgacgt tcagttcggc atattgaccg cgccgttcga tcgcgtggcg gaaaggcgcg
     2161 gctatcgaac gcttcttgcg ttgcccgagc taggtatccc ttggcaacag aacggtgaat
     2221 gggtcca
//
LOCUS       DATIRS010000583         2280 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1715469, whole genome shotgun sequence.
ACCESSION   DATIRS010000583 DATIRS010000000
VERSION     DATIRS010000583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2280)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2280)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2280
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1715469"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..263)
                     /locus_tag="VLM90_07375"
     CDS             complement(<1..263)
                     /locus_tag="VLM90_07375"
                     /inference="COORDINATES: protein motif:HMM:NF017574.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
                     /protein_id="HSQ12820.1"
                     /translation="MTPKLILYSRKDCRLCDEMKAAIRQVSEKIPLDLEEIDVDGAVE
                     IQAEYGAEVPVLVIDGRKAFKYRVTVPELTKKLEKNRRSFFAR"
     gene            complement(260..>2280)
                     /locus_tag="VLM90_07380"
     CDS             complement(260..>2280)
                     /locus_tag="VLM90_07380"
                     /inference="COORDINATES: protein motif:HMM:NF024516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AsmA-like C-terminal domain-containing protein"
                     /protein_id="HSQ12821.1"
                     /translation="LSAPLPALRKYLPVKVAQSPRLEGVFDGIQAGQIEIKKAGVNAT
                     VGELRRLAKTGVGKQVWFDAEIRDAAGKLAVDNTLPLRAVQGRVKLENALLTFSDIRG
                     SYGDSRLTDVDGSHDLAPAGGGKIELHAIGDFNLAELREQLRLGLLPAGFKLASSVQD
                     IGGRGKADLTIKSVADAPLQFDGKVSLDNARLRYGDYSLSEIRGELQLSPKEIKGEKI
                     RAQLRGSPVQIQLALTDYTSDDGAFDLTVESTGMRAGVLTSLLLDTGSLQDPGIVRGW
                     GRYRGTFLNREARRFTGNLDLLNVQLALQPLLQPLRELNGKIEIDETGIDFQNLRALL
                     VGFPASASGRWRFAEKPQLLFDFAAPNLDVSYLISQVDPEATEFYAKLQASGKITLAR
                     GRLRNFEFTDLRTDAAIDRRVWRLSNLTGRAGGGAITGVTTIVDKPDTLGIVTEPKVQ
                     AVPIEAFLKWFNITNTEMTGKVFLVGKLETVGKDDAERKQNLNGAFHLRIEEGTINRM
                     RVLVQLLNLLDLSRWFTLQLPDLTKEGIRFRAITGDFKVIKGVYSTENLVVDSNDLRM
                     TGFGKIDVPKDELDFVVAVRPFAGIDTALNYIPLLGRSVAAIKNSFLVASFNIKGPID
                     NPTITPAPLGTVAEWFWGVLGIPKSIIGLGEGESTKEELKEPSKAPAK"
BASE COUNT          467 a          691 c          620 g          502 t
ORIGIN      
        1 aagcgcgcga aaaacgaccg acgatttttt tctagctttt ttgtcaactc cggcaccgtc
       61 actcgatact tgaacgcttt ccgaccgtcg ataaccagca ccggcacttc ggcgccgtat
      121 tctgcttgaa tctccacggc gccgtcaacg tcaatttctt ccaagtccag cggaattttc
      181 tccgacacct ggcgaatcgc ggctttcatc tcgtcgcaca gacggcaatc cttgcgcgag
      241 tagagaatca gcttgggcgt cattttgccg gcgctttgga gggctccttc agctcttcct
      301 tggtactttc accttcgccc aagccgatga tgctcttcgg aatccccaac acgccccaaa
      361 accattccgc gaccgtgccg agcggagccg gcgtgatggt aggattgtcg atcggacctt
      421 tgatgttaaa acttgcgact agaaaggagt tcttgatcgc ggcgacgctg cgtccgagta
      481 aaggaatata atttagggcc gtatcgatgc cggcgaacgg gcgcacggcg acgacaaagt
      541 ccaactcatc cttcggcacg tcgatcttgc cgaagccggt catgcgcaag tcattgctgt
      601 cgaccactaa gttttcagtc gagtagactc ccttgataac tttgaaatcg cccgtgatgg
      661 ccctgaaacg gatcccctct ttggtaagat caggcagttg cagggtaaac cagcgcgaca
      721 ggtcgagcag attgagcaac tgcaccagga cgcgcatacg attgatcgtg ccttcttcga
      781 tacgcagatg aaacgcgccg tttagattct gtttccgctc ggcgtcgtcc ttgccgactg
      841 tttccagttt gcccactaga aacaccttgc ccgtcatctc ggtattggtg atgttgaacc
      901 atttgagaaa agcttcgatc ggcaccgctt gaaccttcgg ctctgtgacg atgccaagag
      961 tatccggctt atcgacgatg gtcgtcacgc cggtgatggc gccaccgccg gcacggccag
     1021 taaggttgga caaacgccac acccgccgat cgatggcggc gtcggttctc agatcggtga
     1081 attcaaagtt cctgagccgg cctctagcca gggtaatctt cccggacgct tgcagtttgg
     1141 cgtaaaactc agttgcctcc ggatcgactt gcgagatcaa gtagctcacg tctaaattcg
     1201 gggcggcgaa atcgaacagc aattgcggtt tttcggcgaa acgccatcgg ccgctggcgc
     1261 tggcaggaaa gcccacgagc agcgcccgga gattctggaa atcgatgcct gtctcatcga
     1321 tctcaatctt gccgttgagc tcgcgcaggg gctgcagcaa aggctgcaag gctagctgca
     1381 cgttgaggag gtccaaattg ccggtaaacc tccgcgcctc tctatttaga aacgttcctc
     1441 gatagcgccc ccagccgcgc acgatgccgg gatcctgcaa ggagccggtg tcgagcaaca
     1501 aactggtaag cactccggct cgcataccgg tggattccac ggtgagatcg aaagcgccgt
     1561 cgtccgacgt gtaatcggtc aacgccagtt gaatctgcac cggcgagccg cggagctggg
     1621 ctctgatttt ctcgcctttg atctccttgg gcgataattg gagttcgcct ctgatctcgc
     1681 ttaaagaata gtcgccgtaa cgcaggcggg cattgtcgag gctaactttg ccgtcgaatt
     1741 gaagcggcgc atcggccacg ctcttgatcg tcaaatcggc tttgccgcgc ccgccgatat
     1801 cctgcacgga cgacgccagc ttgaagcccg ccggcaacag cccaagtctc agctgctccc
     1861 tcaattcagc caagttaaaa tcgccgatcg cgtgcagctc gatcttgccg ccgcccgccg
     1921 gcgcgagatc atggctcccg tccacatccg tcaatcggga gtcgccatag ctgcctctga
     1981 tatcgctaaa cgtcaggagc gcattttcta gcttgacgcg gccctggacc gcgcgcagcg
     2041 gtaaggtgtt atcgacagcg agcttgcctg ccgcatcgcg aatctcggcg tcgaaccaca
     2101 cctgtttgcc gacgccggtc ttagccagcc ggcgcagctc gccgacggtc gcgttgaccc
     2161 cagctttttt aatctctatt tggccggcct gaataccgtc gaaaacgccc tccaagcgag
     2221 gcgattgggc gactttcacc ggcaagtatt tgcgcagcgc cggcagcggc gccgacagcg
//
LOCUS       DATIRS010000584         2565 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_338672, whole genome shotgun sequence.
ACCESSION   DATIRS010000584 DATIRS010000000
VERSION     DATIRS010000584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2565)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2565)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2565
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_338672"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..376)
                     /locus_tag="VLM90_07385"
     CDS             complement(<1..376)
                     /locus_tag="VLM90_07385"
                     /inference="COORDINATES: protein motif:HMM:NF019342.4"
                     /note="Members of this family of hydrolases with an active
                     site Cys residue belong to MEROPS family C26; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HSQ12822.1"
                     /translation="MKPAAPLIGITSDLAGAERRGTAEPLYFLAQRYVKAIVNAGAIA
                     LILPPAPSSIALRRLLGRLDGLVLSGGNFDIHPSYYGEKPLAGLGTIKAERSNFELDL
                     TAAALKQDLPLLGICGGAQAINV"
     gene            complement(382..2409)
                     /locus_tag="VLM90_07390"
     CDS             complement(382..2409)
                     /locus_tag="VLM90_07390"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HSQ12823.1"
                     /translation="MSQKFLPHALLLLLFLPTAKLAAQSVDGRGTFQKAYSLHNQGNT
                     SQAKELFQKTLENGYRLADYSLYYLALIAFKESQWEQSRRYLLQLKQSYPQSVWQARA
                     TLQRAKLDQAEKKFAQANEILRQLRTDKSVSRELADEASYLIAQNQETLGDLPRAYYN
                     YQELRGNSPTSRWAGLARRDQQRLREKYPEQFALNSVTALADEADRLARERQLSDAEA
                     LYKRVLDNLTDADQRLGILTKIAAIRGRSDAIPLLEQIARDYPDSSEAPKALYQIGQT
                     LWNRHENSQAFEYFKQLLQRYPGSAWADRANFASGDIHEYFGRKAEAIQLYTTVQKQF
                     PGSSVRDDAVWRLAWLHYRGGDWQTALTTFKALAAQARNGSFGTAALYWQARSAEKLG
                     DADSAKQLYRQIFNGGEESYYQTLSQRALERLGEPVQEAKLSKPFAAAENDPALGADI
                     SFHLSRARELTALGIHGLAVVELDQINRRANPKNWLQPLLMREYFANQAYGRSLNLAS
                     QLPLSQSERNYYRYPLAYWELVQQKAQERELDPHLILALIRQESLFDPRARSPATALG
                     LMQLIPPTAARVAKQLGLPAPTQDKLFDPELNVALGTQYLKDLLQRYSHNWFKAIAAY
                     NAGEAAVDRWEREIVTDDIEEFVERIPYIETRGYVKLVLRNHRIYKRLYEQ"
BASE COUNT          464 a          707 c          819 g          575 t
ORIGIN      
        1 cgacgttgat cgcttgagcg ccgccgcaaa tgccgaggag cggcagatcc tgcttgagcg
       61 ccgccgcagt gagatccagc tcgaaattgc tgcgctcggc tttgatcgtg ccaagacccg
      121 caagcggttt ctcgccgtaa taactgggat ggatatcgaa gttgccgccg ctcaagacca
      181 ggccatcgag gcggcccaac aggcggcgca acgcaatgct cgatggcgcc ggcggtaaga
      241 ttagcgcaat cgcgccggcg ttgacgatcg ctttgacgta gcgctgggcg agaaaataga
      301 gcggttcggc ggttcctctc cgctcggcgc cagcgaggtc agaggtgatg ccgatcagcg
      361 gagccgcggg tttcattaga tttactgttc gtatagccgt ttgtagatgc ggtggttacg
      421 caggacgagt ttaacatacc cgcgggtctc gatgtagggg atgcgctcga cgaactcctc
      481 gatgtcgtcg gtgacgatct ctctttccca gcggtccacc gccgcctcgc cggcattgta
      541 ggcggcgatc gctttgaacc agttatgcga atagcgctgc agcagatcct tcaaatactg
      601 ggtgccgagg gcgacgttga gttcggggtc gaacagtttg tcctgggtcg gcgccggcag
      661 gccaagctgt ttggcgactc gtgcggccgt cggcggtatc aactgcatca gtcccaaggc
      721 cgtggccggc gagcgggcgc gcgggtcgaa tagactttcc tggcggatca atgccaaaat
      781 caaatgcgga tcgagctcac gctcctgggc cttttgctgc accaattccc aatacgccaa
      841 ggggtagcga tagtagttgc gctcgctttg tgagagcggc aactggctgg cgaggttgag
      901 gctccgcccg taggcttggt tggcgaagta ctcgcgcatt aatagcggtt gcagccagtt
      961 cttgggattg gcgcgccggt tgatttgatc gagttctaca accgccaggc cgtgaatgcc
     1021 cagggctgtg agctcgcggg cgcgacttag gtgaaaactt atatcggcgc cgagggcggg
     1081 atcattttcc gcggctgcga acggcttaga cagcttggct tcttgcaccg gctcgccgag
     1141 tcgttcgagc gcccgttgcg acagagtttg atagtaggac tcctcgccgc cgttgaagat
     1201 ttgccggtag agctgtttgg cgctgtcggc gtcgccgagc ttttccgcgc tgcgggcctg
     1261 ccagtaaagc gcggcggtgc cgaagctgcc gttacgcgcc tgcgccgcca acgccttgaa
     1321 ggtcgtcaac gccgtctgcc agtcgccacc gcgataatgc agccaggcta aacgccagac
     1381 ggcgtcgtca cgcacgctgc tgccggggaa ttgcttttgc accgtggtgt agagctggat
     1441 cgcttccgct ttcctaccga aatactcgtg gatgtcgccc gaagcgaagt tcgcgcggtc
     1501 ggcccaggcg ctgccggggt agcgctgcaa gagctgcttg aagtactcga acgcctggga
     1561 gttctcatgg cgattccaaa gggtttggcc gatctggtag agcgctttag gcgcttcgct
     1621 actgtcggga tagtcacggg cgatctgctc gagcaacgga attgcatcgc tgcggccgcg
     1681 gatggcggct atcttagtta aaatgcccaa tcgctggtcc gcgtccgtga ggttgtccaa
     1741 aacccttttg tacagagctt cggcgtcact caattggcgt tcgcgcgcca accggtcggc
     1801 ttcatcggcg agagcggtga cgctgttcaa ggcgaactgc tcggggtact tttcacgcaa
     1861 gcgctgctga tccctgcgcg ctaaacccgc ccaacgcgaa gttgggctgt tgccgcgtaa
     1921 ttcctggtaa ttgtaatagg cgcgtggcaa atctcccagg gtttcctggt tctgcgcgat
     1981 taaataactc gcctcgtcgg caagctcccg cgagaccgat ttgtcggtgc gcagttggcg
     2041 caggatctca ttggcttggg cgaatttttt ctcggcttgg tcgagctttg cccgttgtaa
     2101 ggtggctcgc gcctgccaaa ccgattgcgg atagctctgt ttcaactgga gcagataccg
     2161 gcgggactgc tcccactgac tttctttgaa cgcaattaac gccaggtagt agaggctgta
     2221 gtcggcgagc cggtagccgt tttccaaggt cttctgaaac agctctttgg cttggctcgt
     2281 gttgccctgg ttgtggagcg aataggcttt ttggaacgtg ccgcggccgt cgacgctctg
     2341 ggccgccaac tttgccgtcg gtagaaagag caggaggagc agtgcgtggg gcaaaaattt
     2401 ctgcgacatc ggtaggtcaa gtgtaaacaa gcggaggctg tgattcaatc gaatccaggg
     2461 ctaaagccta ggaactctcg gtgacgcagc gctgttgtgt tttcatcgga tgaacgttat
     2521 gtttttcgcc aacttcggtc cgggccacgg gcactggacg caagc
//
LOCUS       DATIRS010000585         1555 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1616857, whole genome shotgun sequence.
ACCESSION   DATIRS010000585 DATIRS010000000
VERSION     DATIRS010000585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1555
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1616857"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..368)
                     /locus_tag="VLM90_07395"
     CDS             complement(<1..368)
                     /locus_tag="VLM90_07395"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12824.1"
                     /translation="MLQIVSLAFAVLIATANSLAAAPLRIAYSAISGAMSSLWVAQEG
                     GYFKREGLDTELLYIGGGTLLIQSMLSGEVPFAYGPSVPVINATLRGSDLVLIGNTGN
                     SLVFSIMARPEFKQPAQLRG"
     gene            complement(372..992)
                     /locus_tag="VLM90_07400"
     CDS             complement(372..992)
                     /locus_tag="VLM90_07400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12825.1"
                     /translation="MVFNFRDIPLFDAVEMPYGMKVISRKPGPTPECEYVDEKSFALP
                     AILQIGDTEFTHFKATHEALAAGSHNAHLMFVTPNDDSSFTLYTVNHYTGPDHEFFAK
                     LAPSRKVEVQSEQRPVYDRRKFAPFRGSVRTEDIACQATQKVLGERREQLAASDRGVI
                     MLRKLILNDIESVRSGKPPRALAHAQGQDGAVKIDSYTGLRRKGMS"
     gene            complement(932..>1555)
                     /locus_tag="VLM90_07405"
     CDS             complement(932..>1555)
                     /locus_tag="VLM90_07405"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSQ12826.1"
                     /translation="DLPHVGRGTPVGAWFRRHWLVVGTTRELRDIPQAVKVLGEGLVL
                     FRDDTGRIGLLGINCAHRGASLEYGDIEDGGIRCPYHGWLFDVGGRCLAMPTEPVEGG
                     FTQKVRHLSYPVREQGGLLFGYLGAESESPPPLPQYLPLVSGEGQRSLEATRLYNYNW
                     FNFIENGADPAHFSILHRADPNDGTWRSWFSIFEISRCSMPSRCLTA"
BASE COUNT          327 a          489 c          441 g          298 t
ORIGIN      
        1 ttgccgcgca actgcgccgg ctgcttgaac tccggccgcg ccatgatcga aaacaccaag
       61 ctattgccgg tgttgccgat cagcaccaag tccgaaccgc gtagcgttgc gttgatcacc
      121 ggcaccgacg ggccataggc aaagggcact tcgccgctca gcatcgactg gattaaaagc
      181 gttccgccgc cgatgtaaag cagctccgtg tccaatcctt cgcgcttaaa atagccgcct
      241 tcctgcgcca cccacaagct cgacatcgcg ccgctgatgg cgctataggc gatgcgcagc
      301 ggcgctgcag ccagcgagtt cgccgtggcg atcagcacgg caaaagctaa cgaaacaatc
      361 tgcaacatga tttagctcat cccttttctg cgcaggccgg tgtaggaatc tatcttcacc
      421 gctccatcct gcccttgcgc atgcgccaag gcgcgcggcg gtttgccact gcgcaccgat
      481 tcaatatcgt taagaattaa cttgcgcaac ataatcacgc cgcgatccga cgccgccaat
      541 tgctcgcgcc gctcgcccaa taccttttgc gtcgcctgac aggcaatgtc ttcagtgcgc
      601 acgctgccgc ggaacggcgc gaatttgcgc cggtcataaa cgggccgctg ctccgattga
      661 acttcaactt tgcgactggg cgccagcttg gcgaaaaact cgtgatcagg accggtgtaa
      721 tggttcaccg tgtacaaggt aaagctgctg tcgtcgttgg gcgtcacgaa catcaggtgc
      781 gcgttatgcg agccggcggc gagcgcttcg tgggttgctt tgaaatgagt gaactcggtg
      841 tcgccgatct gcaaaatcgc cggcagcgca aaacttttct cgtcgacata ttcacactcc
      901 ggcgtcggtc ccggtttgcg tgagatcacc ttcatgccgt aaggcatctc gacggcatcg
      961 aacagcggga tatctcgaaa attgaaaacc aactgcgcca ggtgccgtcg ttcgggtcgg
     1021 cgcggtgcag gatcgaaaaa tgcgccgggt cggcgccgtt ctcgatgaag ttgaaccagt
     1081 tgtagttgta cagacgcgtc gcttcgaggg agcgctgccc ctccccgctg acgagcggca
     1141 agtactgcgg caatggcggc ggactttctg attccgcgcc gagatagccg aagagcaaac
     1201 cgccctgctc ccgaaccgga taggacaaat ggcgcacctt ctgggtaaag ccgccttcca
     1261 ctggttccgt cggcatggcc aaacagcgac cgccgacgtc gaacagccaa ccatggtagg
     1321 gacagcgaat cccgccgtct tcgatgtcgc catattccag cgacgcaccg cgatgcgcgc
     1381 aatttatgcc gagcaaaccg atgcggccag tatcgtcgcg aaacagcacc agcccttcgc
     1441 cgagcacttt gacggcttga ggtatgtcgc gcagctcgcg tgtcgtgccc accaccagcc
     1501 aatggcgccg gaaccatgcg ccgacaggag tgccgcgacc gacatgaggg agatc
//
LOCUS       DATIRS010000586         1508 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1518658, whole genome shotgun sequence.
ACCESSION   DATIRS010000586 DATIRS010000000
VERSION     DATIRS010000586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1508
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1518658"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..331
                     /locus_tag="VLM90_07410"
     CDS             <1..331
                     /locus_tag="VLM90_07410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12827.1"
                     /translation="VEIEVHEGKKREVRRMFEALNYFVEKLIRIKVGPIELGSLPVGE
                     LRPLYQSEVMALKIAVGLAKPGRSGVERRPMITPKKCGGFNSRRSIDSNKPPSSSGAR
                     NRTPRSR"
     gene            complement(294..1463)
                     /gene="moeB"
                     /locus_tag="VLM90_07415"
     CDS             complement(294..1463)
                     /gene="moeB"
                     /locus_tag="VLM90_07415"
                     /inference="COORDINATES: protein motif:HMM:NF006444.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HSQ12828.1"
                     /translation="MAKSFQDIMAEARKEIPEASPQQVNELLKNNGKSPVLLDVRESD
                     EWRQGHLEGAIPLPRGFLEIKVETAIPDKKTPIIAYCAGGVRSLLAAKVMREMGYQNV
                     TSMAGGYGAWKNGGFKWVQDFQYTPDQLIRYSRHFLLPEVGEDGQAKLLQAKVLMVGA
                     GGLGSPAAYYLAAAGVGTMGIIDNDVVDISNLQRQILHANDRVGMPKVESAKKTLEGL
                     NPDVKVIPYQAKLTSENIMEILKDYDLVIDGCDNFPTRYLVNDACVLTGKPNVHGSIF
                     QFEGQATVFYPGKGPCYRCLYPEPPPAEMAPSCAEAGVLGVLPGLIGVIEALEAMKLI
                     LGKGDSLVGRLLHFNTLTMEINTLKLRRDPSCPMCGENPTIKELIDYEEFCSLRH"
BASE COUNT          324 a          430 c          416 g          338 t
ORIGIN      
        1 ggtcgagatc gaagttcatg agggcaagaa gcgcgaagtg cgccggatgt tcgaagcgct
       61 caattacttc gtcgagaaac tcattcgcat caaggtcggg ccgattgaac tgggatcctt
      121 gccggtcggt gaactgcgac cgttgtacca gagcgaagtc atggcgctca aaattgccgt
      181 tggtctggcc aaaccaggca gatcaggagt cgagcgccgc cctatgatca cgccaaaaaa
      241 atgcggcggc ttcaacagcc gccgttccat cgactcgaac aaaccgccat cgtctagtgg
      301 cgcaaggaac agaactcctc gtagtcgata agctctttga tcgtcggatt ttcgccgcac
      361 atcgggcagc tgggatcgcg ccgcagctta agcgtgttga tctccatggt cagagtgttg
      421 aaatgcagca gccgtccgac caagctgtcg cctttgccga gaattaattt catcgcttcc
      481 aacgcttcga tgacgccaat caatccaggc aatacgccga ggacgccggc ttcggcgcag
      541 cttggcgcca tttccgccgg aggcggctct gggtacaagc agcggtagca ggggcctttg
      601 cctggataga aaaccgtcgc ctgtccctcg aactgaaaaa tactgccatg gacgttaggc
      661 ttgccggtga gcacgcaagc gtcgttgacc agatagcgcg tgggaaaatt atcgcaaccg
      721 tcgatcacca aatcataatc cttgaggatc tccatgatgt tctccgacgt gagcttagcc
      781 tgatacggga tcaccttcac gtccggattt agaccttcaa gcgttttttt cgccgactcg
      841 accttgggca tgccgacgcg gtcgttggcg tgcaagatct gccgctgcaa attggaaata
      901 tcgacgacat cgttgtcgat gatgcccatt gtgccgaccc cggccgctgc aagatagtaa
      961 gctgcaggcg agcctaggcc gccggcgccg accatcaaga ctttcgcttg cagtaacttc
     1021 gcctggccgt cttcgccgac ttcaggcagg agaaaatggc ggctgtagcg aatcaactga
     1081 tccggcgtgt actgaaaatc ctggacccat ttgaaaccgc cgtttttcca ggcgccgtaa
     1141 ccgccggcca tggaagtgac gttttgataa cccatctcac gcatgacctt ggcggccaaa
     1201 agcgaccgca cgccgccggc gcagtaggcg atgatcggcg ttttcttgtc gggaatagcg
     1261 gtttcgactt tgatttcgag aaagccgcgg ggcagcggaa tggctccctc taggtgcccc
     1321 tggcgccact catcgctctc gcgaacgtca agcaataccg gcgatttgcc gttgtttttc
     1381 aacagttcgt tgacttgctg cggcgacgct tccgggatct ctttgcgcgc ctcggccatg
     1441 atatcctgaa aactcttggc catgtttcct cctagatgga ccttaaaggt ctaagttatg
     1501 tctcgtct
//
LOCUS       DATIRS010000587         1753 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1910872, whole genome shotgun sequence.
ACCESSION   DATIRS010000587 DATIRS010000000
VERSION     DATIRS010000587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1753
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1910872"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..426)
                     /locus_tag="VLM90_07420"
     CDS             complement(<1..426)
                     /locus_tag="VLM90_07420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12829.1"
                     /translation="MITRFMIQKREAFVAGHEFPITGAYEKLTGRIYGEVDPKHRLNR
                     IIVNLNKAPRNRRGRVEYSSNFCILKPVDMARGNGKIFFDAPNRGSKRILGFLNDGPE
                     ANDPATLEHAGNGFLMRQGYTIVWCGWQGDLMPLKNWLVL"
     gene            complement(484..1428)
                     /locus_tag="VLM90_07425"
     CDS             complement(484..1428)
                     /locus_tag="VLM90_07425"
                     /inference="COORDINATES: protein motif:HMM:NF012913.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HSQ12830.1"
                     /translation="MPLIKIISTGGTIANTGHGLIAIDEVLKDIPQAKALADFEVFEA
                     TRVRSGQMRLAQWLEVARAAGAAADDARVDGIIVTHGTFTTEETAYFLHLCVHSEKPL
                     VLVAAQRKHDEVGNDGDRNLLDAIRLVLAPEARGKGVLVTLHEEIHSAREVIKTNQRP
                     GGFQSLGRSMLGHIEDDQVSFYAAPTRRHTFRSEFNIRDISELPRVDVIAAYVGGDDT
                     AAQACVAAGAQGLVISGYAYNGRPSADQLAGVEKIAAAGTPIVLASRGGQGRIPVDWN
                     DPFIQGDSLIPHKARILLMLGLTKTKDPKDLQRMFNEY"
BASE COUNT          352 a          474 c          538 g          389 t
ORIGIN      
        1 gagcaccagc caattcttca gcggcatcag atcgccctgc cagccgcacc agacgatggt
       61 gtagccctgg cgcatgagaa agccgttgcc ggcatgctcc agcgtcgccg ggtcgttggc
      121 ttccgggccg tcattcaaaa aacccaagat acgcttgctg ccgcggttgg gcgcgtcgaa
      181 aaagatcttg ccgttgccgc gcgccatgtc gaccggcttt aaaatacaaa agttgctgga
      241 gtactcgact cggccgcgcc ggttgcgcgg cgctttgttc aggttgacga tgattctgtt
      301 cagccgatgc ttaggatcca cttcgccgta gatcctgccg gtgagttttt cataggcgcc
      361 ggtgatggga aattcatggc cggcaacgaa ggcttctctt ttttgaatca tgaaacgtgt
      421 aatcataaaa ttaattgaga atggataatt gacaattgat aattgggaaa cgcgaacagc
      481 cgattagtac tcgttaaaca tccgctgcaa atccttcggg tctttggtct tggtcaaacc
      541 gagcatgagc agaattcgcg ccttgtgcgg tatcaggctg tcgccttgaa tgaagggatc
      601 gttccagtcg accgggattc ttccctggcc gccgcggctg gcgaggacta ttggagttcc
      661 cgccgcggcg attttttcga ctcccgcgag ttgatcggcg gagggacggc cattgtaggc
      721 gtaaccgctg atcaccaacc cctgcgcgcc tgccgcgaca caagcttgtg ccgccgtgtc
      781 gtcaccaccg acgtaggcgg cgatgacatc gacgcgcggc agttcactga tgtcgcggat
      841 gttgaactcg gagcggaagg tgtggcgtcg ggtcggtgcc gcataaaagg acacctggtc
      901 atcctcgatg tggccgagca tggagcggcc caaggattga aatccgccgg ggcgctgatt
      961 ggtcttgatc acttcgcgcg ccgaatgaat ctcttcatgc aaggtcacca agacgccttt
     1021 gccgcgcgcc tccggcgcca ataccaaacg aatcgcgtcg agcaggttgc gatcgccgtc
     1081 gttgccgact tcgtcatgct tgcgttgcgc ggcgacgagg acgagcggtt tttcactgtg
     1141 cacgcagaga tgtaggaagt aggcggtttc ctcggtggta aaggtgccgt gggtgacgat
     1201 gatgccgtcc accctggcat cgtccgccgc cgcgccggcg gcgcgggcaa cttcgagcca
     1261 ctgggccagc cgcatttggc cgctgcgcac gcgcgtcgct tcgaagacct cgaagtcggc
     1321 cagcgctttg gcttgcggaa tgtccttcaa tacttcgtcg atggcgatga gaccatggcc
     1381 ggtattggcg atggtcccgc cggtggagat gattttaatc agcggcatag gcttccttca
     1441 tgggcgatgc aattaaaaaa ttcttgcctg gccataccat cggaggattc tggccgtcaa
     1501 ccgcgccagc gcagtggttt attgtgccgc tcggccaacc atacaagatt tgcgtcaacg
     1561 gtgctaagtt gctaagagag cttgcacatg agcgggggct gctcacagtt aataggagat
     1621 tgatatggga aaatgttggc gagcggttat cgcggtgatt gcacttggct tgagcgctgt
     1681 gtctttggca gtcgccgctg aagccaagcg gccgccagag tgggaaaagt tgatcgaagc
     1741 cgccaagaag gaa
//
LOCUS       DATIRS010000588         1566 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_732269, whole genome shotgun sequence.
ACCESSION   DATIRS010000588 DATIRS010000000
VERSION     DATIRS010000588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1566
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_732269"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1421)
                     /locus_tag="VLM90_07430"
     CDS             complement(<1..1421)
                     /locus_tag="VLM90_07430"
                     /inference="COORDINATES: protein motif:HMM:NF015655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12831.1"
                     /translation="MSDALIRQGNHWPVFFARQLKTKQKLVSEHAKEFKATIKDSSSF
                     DEFCAALRRHKQREYLRIGARDLMASVTMEETVRELTALADASLDAAYRFCRAEVEKD
                     FGQLNLPGSAKANRFVVIGMGKLGGGELNFSSDVDVIFLYENDEGESSGGSKGTVGPR
                     EFFSAIGQKIIHAMGDITEYGFVFRIDLRLRPLGANGPLVQSVDSAMLYYESWGQCWE
                     RAAMIKARPVAGAIELGSEFLKGLDPFIYRRYLDYTTVDELRHMKERIENELLTGDDK
                     ARNLKLGYGGIREVEFFTQALQLVNGGYEPSLRGPSTLPALAELAKLKFISIDERDKL
                     TEAYRFLRQAEHKVQIVQEGHVHSIPEGKDEEQAYARRMGYTGKGKLGERELFWRDHR
                     LYTNTVRSIFDRLFYSAQKEIESEGAGAEGAIWNDLDNQAVITKELAGVGFTDPAKAY
                     ENLLDVRDGEIYSPPSPKRLKVMR"
BASE COUNT          304 a          453 c          445 g          364 t
ORIGIN      
        1 cgcatgactt tcaagcgttt cgggcttggc ggcgaataga tttcgccgtc gcgcacgtcg
       61 agcagatttt cataggcctt cgccggatcg gtaaagccga cgccggccaa ttccttggtg
      121 atgaccgcct gattgtcgag atcgttccag atcgccccct cggcaccggc gccttcgctt
      181 tcgatctctt tttgcgcgct ataaaacagc cgatcgaaga tactgcgcac ggtattggtg
      241 tagaggcggt gatcgcgcca gaaaagctcg cgctcgccga gcttgccttt gcctgtgtaa
      301 cccatacgcc gcgcgtaggc ttgctcttcg tctttgccct ccggtatcga atggacatgg
      361 ccttcctgga cgatttgcac tttatgttcg gcttggcgga gaaaacggta ggcctcggtg
      421 agcttgtcgc gctcgtcgat ggaaatgaat ttcagtttcg ccaattccgc caacgccggc
      481 agcgtgctcg gcccgcgcaa actcggctcg tagccgccgt tgaccagctg gagcgcctgg
      541 gtgaaaaatt caacctcgcg gataccgccg tagccgagct tcaaattgcg cgctttgtcg
      601 tcgccggtga ggagttcatt ctcgatgcgt tccttcatgt ggcgcagctc gtcgacggtg
      661 gtgtagtcga ggtagcggcg gtagataaac ggatcgaggc cttttaagaa ctcgctgccc
      721 agttcgattg cgccggccac cggccgggct ttgatcatcg ccgcccgttc ccagcactgc
      781 ccccaagact catagtaaag catcgccgag tcgaccgatt gcaccaacgg gccgttggcg
      841 cccaacggac gaagccgtaa atcaatgcga aagacgaaac cgtattcggt aatatcgccc
      901 atggcgtgaa tgatcttttg gccgatggcg ctgaaaaact cccgcggccc gactgtgcct
      961 ttgctgccgc cgctgctttc cccttcgtcg ttctcataga gaaagatcac gtcgacatcg
     1021 gagctgaagt taagctcgcc gccgcccagt ttgcccatgc cgatgacgac aaatcgattg
     1081 gctttggccg atcccggcaa attgagttgg ccgaaatctt tttcaacttc cgcccggcag
     1141 aaacggtagg ccgcatccag cgaagcatcg gccagcgcgg tcaattcccg gacagtttcc
     1201 tccatggtca ccgacgccat cagatcgcgc gcgccgatgc gcaggtactc gcgctgcttg
     1261 tgccggcgca gggcggcgca gaactcgtcg aaagaagagg agtccttaat cgtcgccttg
     1321 aattctttgg catgttcgga gactaacttc tgtttcgtct tgagctggcg ggcgaagaat
     1381 accggccagt gattaccctg gcggatgagc gcgtcgctca aataggcgct gctgcccaat
     1441 aagaaaatca gcggtggtcg atcgtctccg ggtattttat cgatcgtttt tgttccgctg
     1501 ttttcaatta atcgcagaaa gtgggttcga gcgaaggaag cggatgggct tttcttaatc
     1561 agctgc
//
LOCUS       DATIRS010000589         3143 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_928640, whole genome shotgun sequence.
ACCESSION   DATIRS010000589 DATIRS010000000
VERSION     DATIRS010000589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3143
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_928640"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..206
                     /locus_tag="VLM90_07435"
     CDS             <1..206
                     /locus_tag="VLM90_07435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12832.1"
                     /translation="GQELYQKLQVAAHDSADSLRIDIAKNQIPAVDRRQDGVKYIDLD
                     EQKVFDPSPAIQLIKETLGEIGK"
     gene            444..683
                     /locus_tag="VLM90_07440"
     CDS             444..683
                     /locus_tag="VLM90_07440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12833.1"
                     /translation="MKTSRVPACPECGATTGVRVVHGIPTAAQAKKIALGLAIAADRE
                     EWEGMSKWYCNDCGCDWSRHSRRFKKPGGVNATRG"
     gene            complement(711..1430)
                     /locus_tag="VLM90_07445"
     CDS             complement(711..1430)
                     /locus_tag="VLM90_07445"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSQ12834.1"
                     /translation="MKLEVQMRMSLIAEDRLFQLDVAFHSAKNLIVIFGPSGAGKSVT
                     IQAIAGLLKPEQGRIVLDGRTLFDSKVGVNLAARERNVGYVFQDYALFPHLTVAQNVG
                     FPLQDSLWKGNAGAAMVQDFLAKFDLADLRASYPRQLSGGQRQRVALARALIRTPDIL
                     LLDEPLAALDPVLRGKTRDELLKLQQSFAVPMVVITHDPADVEAFAEDLIILEAGRLA
                     RQLSLNVGSRAAQVRELLGLD"
     gene            complement(1453..2115)
                     /gene="modB"
                     /locus_tag="VLM90_07450"
     CDS             complement(1453..2115)
                     /gene="modB"
                     /locus_tag="VLM90_07450"
                     /inference="COORDINATES: protein motif:HMM:TIGR02141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HSQ12835.1"
                     /translation="MTEALVPLLLTLKIAVTATGIVLFVGVACAYVLGRYSFWGSQII
                     DAICTLPMVMPPTVLGYYLLVAFGRRGWIGAWLEDSFGIQLIFTWQGAVIASASVAFP
                     LVYRAARAALGGVDHHLENAARVLGAGEAKVFFRVSLPLACRGVLAGTMLAFARAMGE
                     FGATLMIAGSIPGKTQTISIAIYEAVQAGQDGMANFLVLLTSLVCVCILAASGKLLQR
                     PF"
     gene            complement(2131..2961)
                     /gene="modA"
                     /locus_tag="VLM90_07455"
     CDS             complement(2131..2961)
                     /gene="modA"
                     /locus_tag="VLM90_07455"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_function: GO:0030973 - molybdate ion binding [Evidence
                     IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HSQ12836.1"
                     /translation="MLSTCRPRLIMDRRSIHAIKAKSSTAMIRLKIILSLVLLLPISR
                     PVAAAELLVSAAASLTNAFKTIGGEFERVHPRDKVIFNFAASDVLVKQIAEGAPVDIF
                     ASADEEAMDKAAKAKLIIAATRFNFAGSRLVLALPMDSPLRFSTLADLNAKAVRRIAI
                     SQPATVPVGRYAKAVLDRAHLWGPLQERFIFTQNVRQTLDYLARGEVDAGFVYSTDAE
                     LMKEKVRIALEVTTTPPVVYPIAVTTASKNGQLAREFVDLARSAPGQSILQKFGFSKP
                     "
BASE COUNT          762 a          922 c          868 g          591 t
ORIGIN      
        1 aagggcaaga actctatcaa aaactccagg tcgccgccca tgattccgcc gactcgctgc
       61 gcatcgacat cgccaaaaat cagatcccgg cggtggaccg ccggcaggac ggcgtgaagt
      121 atatcgacct cgacgagcag aaagtcttcg atccctcgcc cgcgattcag ctcatcaaag
      181 aaaccctcgg cgagatcggc aagtagttca catttgagat ttttgttgta cgatccactc
      241 atcatgaaat acacgaagat caccgaggct ataaaattgg agtccaaact tcgtgccctt
      301 cgcgccttcg tggtgaaaca ttcagtcata cgaactcgcc aattccgctc gacacgcaat
      361 gacatgaagc cagggcagaa ggtcgtcgaa gaggctctcg cccaggctgg ctagaaatga
      421 agaagctcac agcggctcga tccgtgaaaa catccagagt tcccgcttgc cccgagtgcg
      481 gtgcgacgac gggtgtccgc gtcgttcacg gaattccaac cgccgcccaa gcgaaaaaaa
      541 tcgcccttgg cttagccatc gccgccgacc gcgaagaatg ggaaggcatg agcaaatggt
      601 attgcaacga ctgcggctgc gactggagcc gccactcgcg gaggttcaaa aaacccggcg
      661 gcgtcaacgc aacgcgggga tgactgtatc gaacgggcaa aagcgacgcc ctaatccaag
      721 ccaaggagtt cccgaacctg agccgcgcgg cttccaacgt taagcgacag ctgccgcgct
      781 agtcggccag cttcgagaat tattaaatct tccgcgaagg cttccacgtc ggctgggtca
      841 tgcgtaatca ccaccatcgg tacggcgaaa ctttgttgca gcttgagcaa ctcgtcgcgg
      901 gttttgccgc gcaacaccgg atcgagggcc gccaacggct catcgaggag caaaatgtcg
      961 ggcgtgcgga tcaaagcgcg cgccagggcg acgcgttggc gctggccgcc ggagagttgg
     1021 cgcggatagc tggcgcgcaa atctgctaaa tcgaacttgg cgagaaagtc ctggaccatt
     1081 gccgctccgg cattgccttt ccataacgag tcctgcaacg ggaagccgac gttttgcgcc
     1141 accgtgagat gaggaaacaa cgcgtagtct tgaaacacgt agccgacgtt acgctcacgt
     1201 gccgcaagat tcaccccaac cttggagtcg aacaaagtcc ggccatcgag gacaatgcgc
     1261 ccctgctccg gcttgagcag gccggcgatg gcttgaatcg tcacgctctt gcccgcgcct
     1321 gatggaccga agatgacgat cagattcttg gcagagtgaa aagccacatc gagttggaac
     1381 agccggtctt cggctattag actcatacgc atttgcactt cgagtttcat aaaaatgaat
     1441 cgcgggccgg gatcagaacg gccgctgcaa aagcttcccc gatgccgcca gaatgcacac
     1501 gcacacaagc gaagttaaca gcaccaagaa attcgccatg ccatcctggc cggcttggac
     1561 cgcttcataa atcgcgatgg agatcgtttg ggttttaccg ggaatgctgc cggcgatcat
     1621 caaggtcgcg ccgaactcgc ccatggcgcg tgcgaatgcc aacatcgttc cggcaagaac
     1681 accacgacaa gcgagcggca aactgacacg aaagaacact tttgcttcgc cggcgcccaa
     1741 cacccgcgcg gcgttttcga ggtgatgatc gacgccgccg agcgccgctc tggcggctcg
     1801 atagaccagc gggaaagcta cgctcgccga tgcgatcact gcgccctgcc aggtaaaaat
     1861 caattgaatg ccgaaactgt cctccagcca cgcgccgatc caaccgcgcc ggccgaacgc
     1921 gaccaaaagg taatagccca acaccgtcgg cggcatgacc attggcaagg tgcagatcgc
     1981 gtcgatgatc tgactgcccc aaaacgaata gcggccaagg acgtaggcgc aggccacgcc
     2041 aacgaagagt acgatccccg tcgccgtgac ggcaatcttc agcgtgagca acagcggaac
     2101 cagcgcttca gtcattgaat gaggtcgcga tcatggcttg gaaaatccga atttttgcag
     2161 gatcgattgt ccgggagctg acctcgccag gtcgacgaac tcgcgcgcga gctggccgtt
     2221 tttgctcgcc gtcgtcacgg cgatgggata caccaccggc ggagtcgtgg tcacttccaa
     2281 cgcgattctg actttttctt tcatcagctc ggcgtcggtc gaataaacaa aacctgcgtc
     2341 cacttcaccg cgcgccaggt agtcgagagt ttgccgcaca ttttgggtaa agatgaagcg
     2401 ctcctgcaat ggtccccaca gatgggctct atcgagcacc gctttggcgt agcggcctac
     2461 gggaaccgtc gcgggttggc tgatcgcgat acgccgcacc gctttggcat ttagatccgc
     2521 tagcgtgcta aagcgcagcg gcgaatccat cggcagcgcc agcaccaagc ggctgccggc
     2581 aaaattaaac cgtgtggcag cgataatcag cttcgccttc gccgctttat ccatcgcctc
     2641 ctcatccgcc gaggcaaaaa tatccaccgg cgcgccttcg gcgatctgct tgaccaacac
     2701 atccgacgcg gcaaagttaa aaataacctt gtcgcgcggg tgcacgcgct cgaattcgcc
     2761 gccgatggtt ttgaatgcgt tggtcaaact cgctgccgcc gaaaccaata attccgcggc
     2821 cgcgactgga cgagaaatag gaagaagtag aaccaacgac aaaataatct tcaggcggat
     2881 catggctgtg ctgctctttg cctttatagc atggatcgag cgacggtcca ttatcaaccg
     2941 aggacgacaa gtcgacaaca ttactagacg aaaatagagt tgactccgcg ctatccctgg
     3001 gacaaattag ttcaacttta cagtgaagag gtgtcgatgc gaatcacatg ggtgttgatc
     3061 attatttttg cgtcacagct gtggttcagt gtcactgctg ggcgggcagc tgaatcaaaa
     3121 gcgccgtggc aaacggaatg gga
//
LOCUS       DATIRS010000590         2148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_240438, whole genome shotgun sequence.
ACCESSION   DATIRS010000590 DATIRS010000000
VERSION     DATIRS010000590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2148
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240438"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1018
                     /locus_tag="VLM90_07460"
     CDS             <1..1018
                     /locus_tag="VLM90_07460"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ12837.1"
                     /translation="SETMIKLAISFVLLITMPSPASAQTMAQIVEGAKAEKELLTYAT
                     TQAPVMNRLVQGFNKKYPFIKVEYYRAGAEKIAQRFDTEAAAGRHVVDVVNLSGSEMY
                     WTAKKGHFAVYDSPERKAIRPSYKDKQGLWTAQYSTIAVIGYNRKLVAPADVPKSYDD
                     MLLPKWKGHIGLDQTDDDWYMVLVHVMGEKKAAEFIRALARQNVEFRRGRQLAAELLA
                     AGEWAMAPTMRIAAGEEIRRKGAPVDWAAMEPLFPNPPNALALARRAPHPNAGKLWID
                     YILSRDVQDFYANEVGVSVGRADVVLANERLRKLRYGEIDWPVYLEKLQHYQDEWRKV
                     MKPY"
     gene            1033..2088
                     /locus_tag="VLM90_07465"
     CDS             1033..2088
                     /locus_tag="VLM90_07465"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ12838.1"
                     /translation="MLLSKGRFFQAIVAVVLVVCCDVACVAAQSSFFDGKTIRLIVGY
                     PAGTTHDIWARMVTPYLKKYLPGNPDFIVQSMAGAGSMVAVNYLNGVAKPDGLTLATF
                     NAALYFEQLIGRKEVQFDWPKLGWIGSSTPATRLFYIRADHPFSTIADLRRATDPPKC
                     GSAGRGGSGYILPKLFEEALGLKLAIVTGYPGGGEVDLAIEKGEVQCNSTSLSVYFGR
                     EPFHTWRKKNFVRVLIQTGNKRDPRLADVPTIYELMDQYKTPEASRRLTAVFLDAGRF
                     GSWPIAAPPGVPGERVKMFRDGFVKALSDPALLAEAAKKQLEVETIRGEELESLAREV
                     MVQPREVVERLKDLLAN"
BASE COUNT          452 a          593 c          670 g          433 t
ORIGIN      
        1 gagtgaaacc atgatcaagc ttgccatctc gttcgtgttg ttgattacaa tgccatcgcc
       61 ggcctcggcc cagaccatgg cgcagattgt cgaaggggcc aaggcggaga aggagctatt
      121 gacttacgcg accacccagg ccccggtgat gaatcgcttg gtgcagggat tcaataaaaa
      181 atatccattt atcaaagtcg agtattaccg cgccggcgcg gaaaagatcg cccagcgttt
      241 tgacactgag gcggccgctg ggcgccatgt cgtcgatgtc gtcaatctga gcgggtctga
      301 gatgtattgg accgccaaaa aaggccactt cgcggtttac gattcgccgg aaagaaaggc
      361 gattcgccca agctacaaag acaagcaagg tttatggacg gcgcagtact cgaccatcgc
      421 ggtgatcggt tacaaccgca agctggtggc gccggccgac gtgccgaaga gttatgacga
      481 catgctgttg ccgaaatgga aggggcacat cggtttggat caaaccgacg acgactggta
      541 catggtgctg gtgcatgtga tgggcgagaa gaaagcggcg gagttcatcc gcgctctggc
      601 caggcaaaat gtcgaatttc gccgcggccg gcaactggcg gcggaactgc tcgccgccgg
      661 cgagtgggcg atggcgccga ccatgcgcat cgccgccggc gaagagatcc gccggaaggg
      721 cgcgccagta gactgggccg ccatggagcc gctttttccc aatccgccca acgctctggc
      781 gctagcgcgc cgggcgcccc accccaacgc cggcaagctc tggatcgatt acattctgtc
      841 cagagacgtg caagattttt acgccaacga agtcggtgtc agtgtcggcc gcgcagatgt
      901 ggttttggcc aacgagcggc tgcgcaagct gcgctatggc gagatcgact ggccggtgta
      961 tttggaaaag ctgcagcact atcaggacga gtggcgtaaa gtcatgaaac cttactgagc
     1021 gcgggagttg tcatgctgtt atcaaaaggg agatttttcc aggcgatcgt cgccgtggtc
     1081 ttggtcgttt gctgcgacgt tgcctgtgtc gccgcacaat cgtcgttctt cgacggcaag
     1141 acgattagat tgatcgtcgg ttatcccgcc ggcaccaccc atgacatctg ggccaggatg
     1201 gtgacgcctt acttgaaaaa atatctcccc ggcaatcccg atttcatcgt tcagtcgatg
     1261 gccggcgctg gctccatggt ggcggtcaat tacctcaacg gcgtcgccaa gccggacggc
     1321 ctgacgctgg cgacctttaa cgcggcgctc tatttcgagc agttgatcgg ccgcaaggaa
     1381 gtacagtttg actggcccaa gcttggctgg atcggcagtt cgacgccggc gacgcggctc
     1441 ttttacatac gcgccgatca tcccttctcg acaattgccg acttgcgccg cgcgaccgat
     1501 ccgccgaagt gcggttctgc agggcgcggc ggcagcggct atattttgcc caaattgttc
     1561 gaggaagccc tcggcctcaa gctggcgatc gtgaccggtt atccgggcgg cggcgaagtc
     1621 gatctagcga tcgaaaaggg cgaagtgcag tgcaactcca cttcgctctc ggtttatttc
     1681 ggacgggaac cgtttcacac ctggcgcaag aagaacttcg tgcgcgtgct gattcagacc
     1741 ggcaacaaac gcgatccccg tctcgccgac gtgccgacga tttacgagct catggatcag
     1801 tacaagacgc cggaggcgag ccgccgtttg acagcggtgt ttctcgacgc cggacgtttc
     1861 ggttcctggc ccatcgccgc tccgccgggg gttcctggcg agcgcgttaa aatgtttcgc
     1921 gacggtttcg tcaaagcgct gagcgacccg gccttgctgg cggaagccgc gaagaaacaa
     1981 ctggaggtcg agactatccg gggcgaggag ctcgaaagtt tagccagaga agtgatggtt
     2041 cagccccgcg aggtggtcga gcggctgaag gatttgctgg ccaactgaga aacgacagtt
     2101 ggtgtcaatt cgacaaaggt gatggtgcag aagattacaa ttgtcggg
//
LOCUS       DATIRS010000591         1698 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1322068, whole genome shotgun sequence.
ACCESSION   DATIRS010000591 DATIRS010000000
VERSION     DATIRS010000591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1698
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1322068"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1698
                     /locus_tag="VLM90_07470"
     CDS             <1..>1698
                     /locus_tag="VLM90_07470"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSQ12839.1"
                     /translation="GYGKVTGQTKYAADLPFEGLLWAKVLRASVAHARIVKIDASKAK
                     SLKGVRAVLTGADVKDIFVGTRVKDQPVLAYDKVRMAGDAVAAVAADSEAIADEAIGL
                     IDVDYEELPYVDDPVEALKPSAPLIHEDRNKYKNTPKLPEGMSGHNLQSYVRWKNGDV
                     EAGFAQAARVFEHTFRTPLSHHGYIEPCACTVQVHANGQVEVWASNKGPWGLREQMAE
                     DFGVPQDKIKVHIVHVGGDFGAKASLIDVPVAYYLAKAVGGRPVKLVLDYNEEILVGG
                     HRHPSVITVKTGVAADGTLLAVKSDIYFSGGAYGSQKANPQVTVLGGRRLASMYRCPA
                     IDVQTFCSYTNQVPCTQTRTPGSPQVVFAFESQMDIIAKEMGIDALELRRKNILHDGD
                     ANPMGEKWNHILMGEVLERIVKTSGWKKGGAQKNRGWGMALYDRGTPEGKASSALTLE
                     ADGRVNILTGVPDVGPGYYTVSQQMVCEALGLPPEKVGVVFKDTDSLPFDPGTGGSKQ
                     TNTSGHAVNQSAHEVREKLIALAARELGCQHDEIVQQGGKLTAPNKKSTTTEKMIALA
                     "
BASE COUNT          369 a          455 c          558 g          316 t
ORIGIN      
        1 ggggtacggc aaagtaacgg ggcagaccaa gtacgcggcg gatttgccgt ttgaagggct
       61 gctgtgggcg aaggttttgc gcgcttcggt ggcccatgcg cggattgtta aaattgacgc
      121 gtcgaaggcg aaatctttga agggcgtgcg cgcggtgctt accggcgcgg acgtgaaaga
      181 catcttcgtc ggcacgcggg tgaaagacca gccggtgttg gcttatgaca aggtacggat
      241 ggcaggggat gcggtcgccg cggtggcggc cgatagcgag gcgattgccg atgaagcgat
      301 cggtttgatc gatgtagact atgaagagct gccctacgtc gacgatccgg tggaagcgct
      361 gaagccgagc gcgccgctga tccacgagga tcgcaacaaa tataaaaaca cgccgaagct
      421 gccggaagga atgtccggcc ataatctgca atcctacgtg cgctggaaga acggcgatgt
      481 cgaggccggc ttcgctcagg cggcgcgggt tttcgaacac acctttcgca cgccgctgtc
      541 gcatcatggc tacatcgagc cgtgcgcctg cacggtgcag gttcatgcca atggccaggt
      601 tgaagtgtgg gcgtcgaaca aggggccttg gggcttgcgc gagcagatgg ccgaagactt
      661 cggcgtgccg caggacaaga tcaaagttca catcgtccac gtcggtggcg atttcggtgc
      721 caaggcgtcg ttgatcgacg tgccggtcgc ttattaccta gccaaagctg tcggcggcag
      781 gccagtcaag ttagtgctcg actacaacga agaaatcttg gtcggcggcc atcgccatcc
      841 gtcagtgatc acggtgaaga ccggtgtcgc cgcggatggc acgctgctgg cggtgaaaag
      901 cgatatttac ttcagcggcg gcgcttacgg atcgcaaaag gccaatccac aagtcaccgt
      961 gctcggcggg cggcgtttgg cgagtatgta ccgttgtccg gccatcgatg tgcagacttt
     1021 ctgttcgtac accaatcaag tgccttgcac ccagacgcgc acgccgggga gtccgcaagt
     1081 cgtctttgcc ttcgaatcgc agatggacat catcgccaag gagatgggca tcgatgccct
     1141 ggagctgcgg cgcaagaata ttttgcacga tggcgatgcc aatcccatgg gtgagaaatg
     1201 gaaccatatt ctcatgggcg aagtgctgga gcgaatcgtc aagacttccg gatggaagaa
     1261 gggcggcgcc cagaagaatc gcggctgggg catggcgctc tacgatcgcg gcactccgga
     1321 aggcaaggcg agctcggcgt tgacgcttga ggctgacggc cgagtgaata ttcttaccgg
     1381 cgtgcccgac gtcggaccgg gctattacac cgtcagccag cagatggttt gcgaggcgct
     1441 cggcttgcca ccggaaaaag tcggcgtggt ttttaaagac accgacagct tgcctttcga
     1501 tcccggcacc ggcggcagca aacaaaccaa cacctccggc cacgcggtca accagtcggc
     1561 ccacgaggtg cgtgagaaat taattgcgtt ggcggcgcga gagttaggct gccagcatga
     1621 cgagattgtt caacaaggcg gcaagctcac ggcgcctaac aagaagtcca cgaccaccga
     1681 gaagatgatc gcgctggc
//
LOCUS       DATIRS010000592         1571 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1322287, whole genome shotgun sequence.
ACCESSION   DATIRS010000592 DATIRS010000000
VERSION     DATIRS010000592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1322287"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..305
                     /locus_tag="VLM90_07475"
     CDS             <1..305
                     /locus_tag="VLM90_07475"
                     /inference="COORDINATES: protein motif:HMM:NF039581.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12840.1"
                     /translation="AEQIEIVNLRVSASYSLGKPRSVKLSAGVANVQPRERRNVMFLA
                     GSHLTPGFEREKLPPGFAIEGPVIIEEKTSTVVAEPGWQLSVDDAGNLMLHGGARR"
     gene            302..1264
                     /locus_tag="VLM90_07480"
     CDS             302..1264
                     /locus_tag="VLM90_07480"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ12841.1"
                     /translation="MKYLITGGMGVNGAVTARLMVRDGLRPLLMDNRVDYTLIEDIKN
                     QVDIVTGDVCDQAALERAVDDYKVTHIAHLAALMPEGAEANPRLGVKVSLDGTINVLE
                     VARAKGIKRVVYTSSKAVYGEINGDEGPPNYKPLREDYRKLPADLYGSMKVGCEELGR
                     YYRETYGIEFIALRFVSIYGPGKEARHGPLSFYGQLIERAREGAKWVIAEGGDQLNDA
                     VYVGDVGRSVYLALKAPAPKEWTFNIGTGKAWTPRDFLHAAAKLFPNHKIELGPGPSK
                     LGRSKQSYCIFDISAAQRNIGYEPAYTVEQGVKDYVETLDRLGR"
BASE COUNT          367 a          395 c          512 g          297 t
ORIGIN      
        1 atgccgagca gatcgagatc gtcaatctgc gcgtgagtgc gtcgtattct ttgggcaagc
       61 cgcgcagcgt taagctctca gccggcgtcg ccaatgtcca accgcgcgag cgccgcaacg
      121 tgatgttctt ggccggaagc catttgacgc cgggatttga gcgggaaaag ttgccaccgg
      181 gctttgcaat agagggcccg gtgataatag aagagaagac atcgacggtc gtcgccgagc
      241 cgggctggca actgtcggtg gacgacgcgg gaaatctgat gttgcacgga ggagcgaggc
      301 gatgaagtat ttgatcaccg gcggcatggg cgtcaacggc gccgtgacgg cgcgtttgat
      361 ggtgcgcgac ggtctgcggc cgctgctcat ggacaaccgt gtcgactaca cattgatcga
      421 ggatatcaag aatcaggtcg acatcgtcac cggcgatgtc tgcgatcagg cggcgttaga
      481 aagagccgtc gatgattaca aagtcacgca catcgcccat ctggcggcgc tgatgcctga
      541 aggcgccgag gccaatccgc ggctcggggt caaggtcagt ctcgacggga ccatcaatgt
      601 gctcgaagtg gcgcgcgcca aggggatcaa gcgcgtggtt tataccagtt ccaaggcagt
      661 gtacggcgag atcaacggcg acgaggggcc gcccaactac aaaccgctgc gcgaagatta
      721 ccgcaagctt ccggcggatc tatatggctc gatgaaagtc ggttgcgagg aactgggccg
      781 ctactatcgc gagacctacg gcatcgaatt catcgccctg cgcttcgtgt cgatctacgg
      841 accggggaaa gaagcgcgcc atgggccgct gtcgttctac ggccaattga tcgagcgagc
      901 gcgcgaaggg gcgaagtggg tgattgccga gggcggcgac cagttgaacg acgccgtcta
      961 cgtcggcgat gtcggccgct cggtttacct cgcgctcaaa gcgccggcgc ccaaggaatg
     1021 gacgttcaat atcggcaccg gcaaagcgtg gacgccgaga gattttttgc acgccgcggc
     1081 caagctgttt cccaatcaca agatcgagct cggccctggg ccgagcaagc tcggccgaag
     1141 caagcagagc tactgcatct tcgatatctc ggcggcgcag cgcaatatcg gctacgaacc
     1201 ggcgtacacc gtcgagcagg gcgtgaagga ttacgtcgag acgctggatc ggttgggaag
     1261 ataagataag agaagatgga ttaaccacaa agagcacaaa ggtcacaaag taggaagagt
     1321 ttcggattcg gagaattgcc gcaaagaacg caaagtaccc aaagaagaat gtggaattgg
     1381 taggggtgga ttcgaacccc ccttcttatg ttttgtgctc tttgtggtta aagaatccga
     1441 ttgaatttta acagagcaac ggaggaacta tggcagaggc acctaaaggt ggcggagaag
     1501 tttggtcggc gggcattggc cggaagagta atgctcaata tggttcggat ttgatggtcg
     1561 aagtgttgcg t
//
LOCUS       DATIRS010000593         1508 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1814494, whole genome shotgun sequence.
ACCESSION   DATIRS010000593 DATIRS010000000
VERSION     DATIRS010000593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1508
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1814494"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(84..1337)
                     /locus_tag="VLM90_07485"
     CDS             complement(84..1337)
                     /locus_tag="VLM90_07485"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12842.1"
                     /translation="MWSKLSGLFYGWHMVGASAAVRLLGAGLHSYGFTVFFLPLSQEL
                     NLSRTATSFAFSLARAEGAIEGPIVGHMLERFGPRPVMIASVTLMGVGYLLLSQVESY
                     WSFVLVYTVLISLTHSGGFMHAPMTLINTWFIRWRARAMTINSAAYGLGGVLIAPLLS
                     IIVHTWGWRWGAAFAGVSFLIFGIPLCLTIRRSPESMGLLPDGETQQAFHDRTTAPQA
                     ISEIEITPRQAMRSFAFWALVFGAAVRNASYHAISTHFIPMMIWKGMSPQQATFLLSA
                     FAFLGFSSTVLLGWLADSMNKPRLISAVLFVAGASILLPIFGTSMAPLLLFTLLFTSV
                     ESTYPVAWAMVGDIFGRKHFAKIRGYMSVFYVWGSVTGPVVAGAIWDRWHTYEPMLWG
                     LVVMFFISGVLYSLLEKPWVRPRPQ"
BASE COUNT          388 a          423 c          439 g          258 t
ORIGIN      
        1 tcaaaagttc aatgtcagat agatcggatc gctatccgat tccgaaacgt tgaacgctta
       61 aaccttgaac gtttgaacgg ccgctattgc ggcctcggcc tgacccaagg cttttcgagc
      121 aggctgtaca gaacccccga gatgaaaaac atcacgacca gcccccaaag catcggctcg
      181 taggtgtgcc agcggtccca gatcgcgccg gcgaccaccg ggccggtgac gctgccccag
      241 acgtaaaaga cactcatgta accgcgaatc ttggcgaagt gtttgcgacc aaagatatcg
      301 ccgaccatcg cccacgccac cgggtaggtc gattcaacgc tggtaaacag cagagtgaag
      361 agcaacagcg gtgccatcga tgtgccgaag atcggcagca ggatcgacgc gccggcgacg
      421 aataaaaccg ctgaaatcag ccgcggtttg ttcatcgagt cggcgagcca gcccagcaga
      481 accgtcgagc taaatccaag aaaagcaaag gcgctcaaca gaaacgtcgc ttgctgcggg
      541 ctcatgcctt tccagatcat catcggaatg aagtgggtgg agatcgcgtg gtacgaggcg
      601 ttgcgcaccg cggcgccgaa gaccagcgcc caaaaggcaa acgagcgcat agcttgacgc
      661 ggcgtgatct cgatctcgct aatcgcctga ggcgccgtgg tgcgatcgtg aaacgcttgt
      721 tgggtttcgc cgtccggcaa gagtcccatg ctctccggcg aacgacggat tgtgagacag
      781 agcgggatgc cgaaaattaa gaacgaaact ccggcaaagg cggcgcccca gcgccaaccc
      841 caggtgtgca cgatgatgct caagagcggc gcgattagca cgccgccaag accgtaggcg
      901 gcgctgttga tggtcatggc gcgggcgcgc cagcggatga accaagtgtt gatcagcgtc
      961 atcggcgcat gcatgaatcc gcccgagtgg gtgagcgaga tcagcacagt gtaaaccagg
     1021 acaaaactcc agtagctctc gacctgcgag agcagcagat aaccgacgcc catgagcgtc
     1081 actgaagcga tcatcacagg ccgtggaccg aagcgctcga gcatgtggcc gacgatgggc
     1141 ccctcgatgg cgccctcggc gcgcgccaat gaaaaagcga aagaggtcgc ggtgcggctg
     1201 aggttcaatt cctggctgag cggcaaaaag aaaaccgtga agccgtagct gtgcagaccg
     1261 gcgccgagca accgcaccgc ggccgaagcg ccgaccatat gccagccgta aaaaaggccg
     1321 gaaagtttac tccacattag actttaacga tgaagcgagt tgggaaaatg aacaaatgga
     1381 taatggataa ttgagaatgg ataatggggg actaagattt caaatccgta tccgacaatt
     1441 ctccattatc aactctcaat tatccattgc tttcattccg cctcgccatt ttcggcggct
     1501 ttgaggcg
//
LOCUS       DATIRS010000594         2500 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1617794, whole genome shotgun sequence.
ACCESSION   DATIRS010000594 DATIRS010000000
VERSION     DATIRS010000594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2500)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2500)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2500
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1617794"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1028)
                     /gene="hslU"
                     /locus_tag="VLM90_07490"
     CDS             complement(<1..1028)
                     /gene="hslU"
                     /locus_tag="VLM90_07490"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HSQ12843.1"
                     /translation="MNDVTKSSTDAGVSPTPVMTPREIVSELDRYIVGQKDAKRAVAI
                     ALRNRWRRQLVPDDLRDEIAPKNIIMIGPTGVGKTEISRRLAKLAQAPFIKVEASKFT
                     EVGYVGRDVESIIRDLTDLAVNMVKEEEKQKVEIRAREVAEERVLDLLLPAGEVIDAD
                     AVDAERLQGTRDKLKKMLRDGKMDDRFVEIEMSQSMMPMIEVLTPQGMEGMEFNLKDM
                     FANMMPKKTKKKTVKIPEALEILTQEEAGKLVDMDKVTGEATRRVEQSGIVFLDEIDK
                     IAGRESAHGPDVSRQGVQRDLLPIVEGCTVNTKYGMVRTDHILFVASGAFHTAKPSDL
                     IPEFQGRFP"
     gene            complement(1182..1712)
                     /gene="hslV"
                     /locus_tag="VLM90_07495"
     CDS             complement(1182..1712)
                     /gene="hslV"
                     /locus_tag="VLM90_07495"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: protein motif:HMM:NF003964.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0051603 - proteolysis involved in protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HSQ12844.1"
                     /translation="MFEGTTILAIRHGGKVVMVGDGQVSLGQTVMKHSARKVRKLHHD
                     KVIAGFAGATADAFTLFEKFEAKLEQFNGNLKRAAVELAKDWRTDRILRRLEALLIIA
                     DVTELLVISGAGDVIEPDDGVIAIGSGGNYALAAARVLVKHTQLDARVIAEEAMRVAA
                     GICVYTNEQLTFEELS"
     gene            complement(1798..>2500)
                     /locus_tag="VLM90_07500"
     CDS             complement(1798..>2500)
                     /locus_tag="VLM90_07500"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009037 - tyrosine-based site-specific
                     recombinase activity [Evidence IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA];
                     GO_process: GO:0007049 - cell cycle [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HSQ12845.1"
                     /translation="DRKKSSIGRKLAALKGFFRYLVTTKRLGKDPLLLINSPKQEKPL
                     PKFLTVDDAFHLLDTIKLNSGLDQRDRAVLEVFYSTGIRVSELVGLDCSDIDVPLGII
                     RVVGKGAKERIVPIGAVALKALESYADSVRLQWQVACRGATPVFLNHRCRRITTRSVA
                     RIVEKHLKLAGIQIKMGPHGLRHSFATHLLNGGADLRVIQELLGHVSLSTTQRYTHLN
                     LDQLTAVYDKAHPRA"
BASE COUNT          507 a          776 c          677 g          540 t
ORIGIN      
        1 gggaatcgcc cctggaattc gggaatcaag tccgacggct tggccgtatg aaacgccccg
       61 gaagcaacga acagaatatg atcggtgcgc accatgccgt acttggtatt gacggtgcag
      121 ccttcgacga tcggcaaaag atcgcgctgc accccctggc gcgagacatc cggcccatgc
      181 gcggactcgc ggccggcgat cttgtcgatt tcgtcgagaa agacgatacc cgactgctcc
      241 acacgccgag tagcctcgcc ggtgactttg tccatgtcga ccagcttccc cgcttcttcc
      301 tgggtgagaa tctccagcgc ctcggggatc ttgacggtct tctttttggt tttcttgggc
      361 atcatgttgg caaacatatc tttgagattg aactccatgc cttccatgcc ctggggcgtc
      421 agcacttcga tcatcggcat catcgactgt gacatctcga tctcgacgaa gcggtcgtcc
      481 atcttgccgt cgcgcagcat tttcttgagc ttatcgcggg tcccctgcag ccgctccgcg
      541 tcgaccgcgt cggcatcaat cacctcaccg gcaggcagca acaaatcgag cacccgctcc
      601 tcggccactt cacgcgcccg gatctcgacc ttctgctttt cttcctcttt gaccatgttg
      661 accgcgagat cggtcagatc gcggatgatc gattcgacat cgcggccgac ataaccgacc
      721 tcggtgaact tcgaagcttc gaccttgata aacggcgcct gggcgagctt ggccaagcgc
      781 cgggaaattt ccgtcttgcc cacgccggtg gggccgatca tgatgatatt tttcggcgcg
      841 atctcgtcgc gcagatcgtc cggcaccaac tggcgccgcc agcggttgcg cagcgcgatg
      901 gccaccgccc gtttggcgtc cttttgtccg acgatataac ggtcgagttc cgagacgatc
      961 tcacgcggag tcatcaccgg cgtcggcgaa acaccggcat ccgtggacga ttttgtaacg
     1021 tcgttcatag gaattaacag tcctaacaat ttcgccagga aatgcaatga tttccccgcg
     1081 agtagccagg cgagcgatgc accggggccc gagtccccgc tctgtcatct gaaatttgca
     1141 atatgaaatc tgaaattcgt agttcctcgc aacgcgagga actacgacag ctcttcaaag
     1201 gtcagctgct cgttggtgta aacgcagatg ccggcggcca cccgcatggc ttcttcggcg
     1261 atcacgcggg cgtcgagctg ggtgtgtttg accagcaccc gtgccgccgc caaagcatag
     1321 ttaccgcccg agccgatggc gatgacgccg tcgtccggtt cgatgacatc gccggcgccg
     1381 gaaataacca aaagctcggt cacgtcggcg atgatcagca acgcctccaa ccgccgcagg
     1441 atacgatcgg tgcgccaatc cttggccagc tccaccgccg cgcgcttgag attgccgttg
     1501 aattgttcga gcttggcttc gaatttctcg aacagcgtaa aggcatccgc cgtcgcgccg
     1561 gcgaaaccgg cgatcacttt gtcatgatgc agcttgcgca ccttgcgcgc gctatgcttc
     1621 atcaccgtct gccccaaact cacctgacca tcgccgacca tgaccacttt gccgccatgg
     1681 cggatcgcta atatggtagt tccttcaaac ataactaatt tcgggtcgac gatagaggat
     1741 cgagtattga gaatcgcgat cttctatcct ccaccttcca tcctcgactt tctcgtttca
     1801 ggcgcgcgga tgcgccttgt cgtacaccgc ggtcaattga tccaagttca aatgggtata
     1861 gcgctgggtc gtcgataggc tgacatggcc gagcagctcc tgaatcaccc tcaggtcggc
     1921 gccgccgttg agcaagtgag tggcaaagct atggcgcaaa ccatggggtc ccattttgat
     1981 ttgaatgccc gccagcttca aatgtttttc gacgatgcgc gcgacactgc gcgtggtgat
     2041 gcgccggcag cgatggttga gaaacaccgg cgttgcgccg cggcaagcga cctgccactg
     2101 caatcggacc gagtcggcgt aggactctag cgccttcagc gccaccgcgc cgatcggtac
     2161 gatgcgttcc ttggcaccct tgccgaccac gcgaatgatg cccaatggga cgtcaatatc
     2221 ggaacagtca agccccacca actcgctgac gcgaatccca gtggaataga acacttccaa
     2281 caccgcgcga tcgcgctggt cgaggccgct attaagcttg atcgtatcca acaaatgaaa
     2341 ggcatcgtcg acggtaagaa acttgggtag cggcttttcc tgcttgggtg agttgatcaa
     2401 cagcagcgga tctttgccga gccgcttggt cgtcaccaaa tagcgaaaga accccttcaa
     2461 cgccgccagc ttgcggccga tcgagctctt cttgcgatcc
//
LOCUS       DATIRS010000595         1878 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1519636, whole genome shotgun sequence.
ACCESSION   DATIRS010000595 DATIRS010000000
VERSION     DATIRS010000595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1878)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1878)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1878
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1519636"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..447
                     /locus_tag="VLM90_07505"
     CDS             <1..447
                     /locus_tag="VLM90_07505"
                     /inference="COORDINATES: protein motif:HMM:NF013626.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PUA domain-containing protein"
                     /protein_id="HSQ12846.1"
                     /translation="EEAAAAGIPTVIASGLQGGVLGKVFAEKESVGTLILPESNRLTS
                     RKHWIAYNLKPVGEIVVDQGAHDAVVRKGKSLLPSGLKEVRGAFGVGECVRCLDSDGR
                     EFARGLVNYSAQELNRIKGLHTSRIEKVLGYKAYEEIIHRDDLVVL"
     gene            455..1726
                     /locus_tag="VLM90_07510"
     CDS             455..1726
                     /locus_tag="VLM90_07510"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: protein motif:HMM:NF001221.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HSQ12847.1"
                     /translation="MSGTNEKLKQEALRLGKQAKVAARLLAPLSSMEKNRVLCLMADK
                     LEGRSSFLIEENKKDLHSAKKSGVSSAMLDRIALNPTRVQAMAHGLRDVAALPDPVRE
                     VIKMWRRPNGLQVGRMRIPLGVIGMIYEARPNVTADAAALCLKSGNAVILRGGSEAHH
                     SNQAVAALLREACVGTRVPEDAVQVVQFKEHALVNELLQLEEYIDLIIPRGGEELIRA
                     VAANSKIPVIKHYKVVCHVYVDADASLEMAESICFNANVQRPSVCNAMETLLVHEAIA
                     AKFLPGMIKKYRAAGVEIRGCDKTQALAPGVKPATDVDWTTEYLDLILAVRVVKDMDE
                     AIEHIENYGSEHTESIVTTNYQRSREFIDRVNSSAVMVNASTRFNDGGELGLGAEIGI
                     STSKIHAFGPMGLEELTTTKFIIFGDGQVRE"
BASE COUNT          422 a          506 c          579 g          371 t
ORIGIN      
        1 gaagaagccg cggcggcggg tatccccacg gtgatcgcca gcggattgca aggcggcgtg
       61 ctcggcaaag tatttgccga gaaagaatcg gtcggaacgt tgatcttgcc tgagagcaac
      121 cggctcacca gccgaaagca ctggatcgcc tacaatctca agccggtggg cgagattgta
      181 gtcgatcagg gcgcccacga tgccgtggtg cgcaagggca agagtcttct gccgtcgggg
      241 ctgaaagagg ttcgcggcgc attcggcgtc ggcgagtgtg tgcgctgtct ggactcggac
      301 ggtcgggagt ttgcccgcgg cctggtcaac tacagcgcgc aggagttgaa tcggattaaa
      361 ggattgcata caagcaggat tgaaaaagtc ctcggttaca aggcctacga agagatcatt
      421 caccgcgacg atttagtcgt cttgtgaaaa gcgcatgtcc ggcacgaacg aaaaattaaa
      481 gcaggaagcc cttcgcctcg gcaagcaggc caaggttgcc gcacgcctgc ttgcgccgct
      541 ttcgtcgatg gaaaaaaatc gcgtgctctg tctgatggcg gacaagctcg aagggcgcag
      601 cagtttcttg atcgaagaaa acaagaagga tctacactcg gcaaaaaaaa gcggcgtctc
      661 gagcgcgatg ctcgatcgca tcgcattgaa tccaactcgg gtgcaggcga tggcgcacgg
      721 gctgcgcgat gttgccgcgt tgcccgaccc ggtgcgcgaa gtgatcaaga tgtggcgccg
      781 gcccaatgga ctgcaagtcg ggcgcatgcg cattccgctc ggcgtcatcg gcatgatcta
      841 cgaagcgcgc cccaacgtga cggcggacgc cgccgcgctc tgtctaaagt ccggcaacgc
      901 ggtgattctg cgcggcggta gcgaagcgca tcattccaat caggcggtcg cggcgctgct
      961 gcgcgaagca tgcgtcggga cgcgcgttcc tgaggacgct gttcaagtgg tccagttcaa
     1021 agagcatgcc ctggtgaacg agctgctgca attggaagaa tatatcgatc tgatcattcc
     1081 gcgcggcggc gaagagctga ttcgcgccgt ggcggcgaac tcgaaaatcc ccgtgatcaa
     1141 gcattacaaa gtggtttgtc atgtttacgt cgacgccgat gcgtcgctgg agatggcgga
     1201 gagcatctgt ttcaacgcca atgtgcagcg tccttcggtc tgcaatgcca tggaaacctt
     1261 gctggtccat gaagccatcg cggcgaaatt cctgccgggg atgattaaaa aatatcgagc
     1321 ggcgggcgtt gagatccgcg gttgcgacaa gacccaggcg ttggcgccgg gcgtcaagcc
     1381 ggccaccgat gtggattgga ccacggaata cctcgatcta attctcgccg tgcgcgtggt
     1441 caaagacatg gatgaagcca tcgagcacat cgagaattat ggctcggagc acacggagag
     1501 tatcgtcacg acgaattatc aaagatcgcg tgagttcatc gatcgagtca attcctcggc
     1561 ggtgatggtg aatgcttcga cacgcttcaa cgacggcggc gagctcggtc tgggcgccga
     1621 aataggtatc agcacgagca aaatccacgc gtttggaccc atgggcctgg aggagctgac
     1681 gacgaccaag ttcatcatct tcggcgatgg acaggtgaga gagtaaatgg aaaggcggaa
     1741 ggcggaagga tgaaggataa agttaagaca tgtgctcgcc ccgatgagat tgacatcgca
     1801 cctccacctt ccgccctccg ctttccgcct tttcccatct tcctttcgcc ttcatccttc
     1861 atcctttttg cctttccc
//
LOCUS       DATIRS010000596         1981 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1814660, whole genome shotgun sequence.
ACCESSION   DATIRS010000596 DATIRS010000000
VERSION     DATIRS010000596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1981)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1981)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1981
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1814660"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..879)
                     /locus_tag="VLM90_07515"
     CDS             complement(<1..879)
                     /locus_tag="VLM90_07515"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ12848.1"
                     /translation="MKRLLTVLTGLALYSGLASNVMAAQWSPALSGVIKDANKEGKLK
                     LLWGEGTLGGTKGAAKFEQMMNKMFGTDIRISFTPGAAMPQVGSQIAAEHAAGQSSAS
                     DVYIGADSYLTPLVKRKIFHEVEWPKYLPGRITNEMVEGDRTSLRVYTGIPGIPYNTK
                     RTAKNDVPKTLKDMLKPHWKGKIASTPYVTSLNILAAKEMWGKEAALGYVRQLSKQVT
                     GLIRCNEIDRVASGEFLAFVMDCSGSQTFEAQAHGAPVEHVIAADGAMLRLRMLAIPK
                     NAEHPNAAKLFTTFMLT"
     gene            1110..>1981
                     /locus_tag="VLM90_07520"
     CDS             1110..>1981
                     /locus_tag="VLM90_07520"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HSQ12849.1"
                     /translation="MPNATDKTKVDPITLEVIRHGIISICDQIDANMTRTAFSPYIYE
                     YKDYAVGFVSATGELLAQSTGGMPVFVADSVGAAVKDGLEVYGRENLHKGDVVVCNHA
                     AIQGQHLNNTVMYTPVLAGAKGDELIGFFAVNCHWIDIGGSAIGSVSYSSTDIFMEGL
                     QLRSIKMWSKGEPIEEVYRIIENNTRFPLELLGDIEAQLGGCFLGRDLTQAMANKYSP
                     AVFLGTLDAILDQCEAATREKIRAIPDGVSQHEAFLDNDGVRDEKIPIRVKVIVAGDE
                     MTIDYSAMAPQVRG"
BASE COUNT          399 a          542 c          599 g          441 t
ORIGIN      
        1 ggtcagcatg aaagtcgtga acagtttggc ggcgttggga tgctcggcat tttttggaat
       61 cgccagcatg cgaaggcgca gcatggcgcc gtcggcggcg atgacatgct ccaccggcgc
      121 gccgtgggct tgcgcttcaa aggtctgcga gccggaacaa tccatgacga aggcgagaaa
      181 ttcgccggag gcgacccggt cgatctcgtt gcagcggatc agtccagtga cttgtttcga
      241 aagttgccgg acatatccga gcgccgcttc tttgccccac atctctttcg ccgcgagtat
      301 gttcaagctg gtcacgtatg gcgtcgaagc gattttgcct ttccagtggg gtttgagcat
      361 atccttgagg gttttcggca catcgttctt ggccgtgcgc ttggtattgt agggaatgcc
      421 cggaataccg gtgtagacgc gcaggctggt gcggtcgcct tcgaccatct cgttggtgat
      481 ccggccgggc agatatttgg gccactctac ttcatgaaag attttgcgct tgaccagcgg
      541 cgttagatag ctgtcggcgc cgatgtaaac gtccgaggcg gaggattggc cggcggcatg
      601 ttcggcggcg atctggctgc ccacctgggg catggcggcg ccgggggtga agctgatgcg
      661 gatgtcggtg ccgaacattt tgttcatcat ctgctcgaac ttggccgcgc ccttggtgcc
      721 gccaagggtg ccctcgcccc acagcagttt gagcttgcct tctttattgg cgtctttgat
      781 cacgccggac agggccggcg accattgcgc ggccatgacg tttgaggcca aaccggaata
      841 gagcgcaaga ccggttagaa ctgttagtaa acgtttcata ttcactcctg agtaatcctt
      901 ggtggtctat acctgccagg ttcgccacct gtcaaccaag agcgagccgg aagcttatgc
      961 catacgcccc ttcgaccggc atgggattat cctgccgtct ggcataaatc cattagcgaa
     1021 aggatcgctt gcttgacaac tttttggtta cttgaaagga tcgtaaaatt gccgggctta
     1081 agattatccg gctacgaaat cgagaatcca tgcccaacgc cactgacaaa accaaagtcg
     1141 atccgattac gctggaagtg atccgccatg gaatcatttc gatctgcgat cagatcgacg
     1201 ccaacatgac gcgcacggcg tttagcccgt atatctacga gtacaaggat tacgccgtcg
     1261 gcttcgtcag cgcgacgggt gaattgctag cccaatccac cggcggcatg ccggtgttcg
     1321 tcgccgactc ggtgggtgcc gcggtgaaag acggcctgga agtctacggc cgggagaatt
     1381 tgcacaaggg cgatgtcgtc gtctgcaacc acgcggcgat ccaggggcag catttaaaca
     1441 acacggtcat gtatacgccg gtgttggccg gcgccaaggg cgacgagctg atcggattct
     1501 tcgcggtcaa ttgccattgg atcgacatcg gcggctcggc gatcggctcg gtgtcctatt
     1561 cttccaccga tattttcatg gaagggttgc agctgcgctc gatcaagatg tggtccaaag
     1621 gcgagccgat tgaagaagtc taccggatca tcgagaacaa cacccgtttc ccgttggaac
     1681 tgttgggcga catcgaagcg cagctgggcg gctgcttctt gggccgggac ttgacccagg
     1741 cgatggcgaa taaatatagc ccggcggttt ttctcggcac cctcgacgcg attctcgatc
     1801 aatgcgaggc ggcgacgcgg gaaaagatcc gcgccatccc cgacggcgtt tcccaacatg
     1861 aagcgtttct cgacaacgac ggcgtgcgcg acgagaaaat tcccattcgc gtcaaagtca
     1921 tcgttgccgg cgacgagatg accatcgatt attccgcgat ggcgccgcag gtgcgcggct
     1981 g
//
LOCUS       DATIRS010000597         3144 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_831538, whole genome shotgun sequence.
ACCESSION   DATIRS010000597 DATIRS010000000
VERSION     DATIRS010000597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3144
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_831538"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..262
                     /locus_tag="VLM90_07525"
     CDS             <1..262
                     /locus_tag="VLM90_07525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12850.1"
                     /translation="ALLLAPPDVIQLRFGHDSFTFHMGQVTAQGLPARFIENEHIALD
                     IDEPKDLERFLAYGYQGGESTRGAQELLAERGAPLAQGSGGA"
     gene            259..1011
                     /gene="cofE"
                     /locus_tag="VLM90_07530"
     CDS             259..1011
                     /gene="cofE"
                     /locus_tag="VLM90_07530"
                     /EC_number="6.3.2.31"
                     /inference="COORDINATES: protein motif:HMM:NF009809.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043773 - coenzyme F420-0 gamma-glutamyl
                     ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="coenzyme F420-0:L-glutamate ligase"
                     /protein_id="HSQ12851.1"
                     /translation="MKRVELVGLEGIAEVHAGDSVGQLICDACERQQWPLADGDVLVV
                     AQKIVSKAEGQMIALATIQPSARARELARELGKEAELIEVILGESRRVVRTGGRALIV
                     ETHHGFVCANAGVDQSNFGLKQVALLPKDADRSAREIRAEIQRRTGKQVGIVVSDSFG
                     RAWRVGTVDVAVGVAGIDPIKDERGLKDRHGYELKAAVAAVADELASAAELVMGKRDG
                     VPVVIVRGYDIQINQEGSVQELLRPEAEDLFR"
     gene            1026..1631
                     /gene="npdG"
                     /locus_tag="VLM90_07535"
     CDS             1026..1631
                     /gene="npdG"
                     /locus_tag="VLM90_07535"
                     /inference="COORDINATES: protein motif:HMM:TIGR01915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent F420 reductase"
                     /protein_id="HSQ12852.1"
                     /translation="MDNFTVAIVGGTGNLGSALALRLGAPGVKIIIGSRDAEKAHKAV
                     ETLRPSLRAGEMIGMTNQAAVKDANFVVIAVPYEGQAQMVQDLKGQVAGKIIIDTVVP
                     LNKVKPFVPAAGSALQEAQQILGDEAPVIGALHNISAVDLGDVDSPLGDVLVCGDNGE
                     AKQKVMEIIERIGATAYDAGPASNAYVIEGLTGVIIALNRK"
     gene            2211..2786
                     /locus_tag="VLM90_07540"
     CDS             2211..2786
                     /locus_tag="VLM90_07540"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSQ12853.1"
                     /translation="MESTQDLGDEVLVALCQQGQADCFEVLVRRYMEKAFHIAYNFTR
                     NTETAKDLSQDAFLRAFANIKRFDGRSSFYTWFYRIVVNLCLDHARRSGRVMWESLDK
                     SAGEAGGQRQLVDTQYQPDQQAIAGEATRRANATLESMPNKQRTAFLLRNHEGLPIAD
                     IAKVMKTTEGTVRVYLHRAVAALRHSLVEFV"
     gene            2796..>3144
                     /locus_tag="VLM90_07545"
     CDS             2796..>3144
                     /locus_tag="VLM90_07545"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HSQ12854.1"
                     /translation="MENHVAPLEGACKNYEEDLVLYYYGESGAAERAAMEQHMTQCGR
                     CRNFVDDLGRVLPQMAPQPELPQPFWDSYFRETMAKLDAHEARQSWWRGWFAPLNGWL
                     VPAFGTMAVAALAI"
BASE COUNT          627 a          858 c         1019 g          640 t
ORIGIN      
        1 cgcgctgttg ttggcgccgc cggatgtgat ccaactgcgc tttggccatg acagtttcac
       61 ttttcatatg ggccaggtaa ccgcgcaagg gttgccggct cgctttatcg agaacgaaca
      121 tatagctctc gatatcgacg agcccaagga tctcgaacgg tttcttgcct atggttatca
      181 gggcggcgag tcgacccggg gtgcgcagga gttgctcgct gagcgcggcg cgccgctagc
      241 ccagggctcg ggtggggcat gaaaagagtt gagctggtcg gcttggaggg gatcgcggag
      301 gttcatgccg gcgactccgt cgggcagctt atctgcgatg cctgcgagcg gcagcagtgg
      361 ccactcgccg acggcgatgt gctggtggtg gcgcaaaaga ttgtttccaa agccgaaggt
      421 caaatgatcg cgttggcaac gatccagccg tcggcgcggg cgcgggaact ggcgcgcgaa
      481 ctgggtaaag aagccgaact gatcgaagtc attctcggcg agagccgcag agtcgttcgc
      541 accggcgggc gggcgctgat cgtcgagacc catcatggct ttgtctgcgc caatgccggc
      601 gtggatcagt ccaacttcgg gctcaagcaa gttgccctat tgcccaagga cgccgaccgc
      661 tcggcgcgcg agattcgcgc tgaaattcag cgccggactg gcaagcaagt cggcatcgtg
      721 gtcagcgata gcttcggccg cgcctggcgc gtcggcacgg tggatgtggc ggttggggtt
      781 gccggcatcg atccgatcaa ggatgagcgc ggtctcaagg atcgccatgg ttacgaactt
      841 aaagcggcgg tggcggcggt ggccgatgaa ttggcgtccg ccgccgagtt ggtgatgggc
      901 aaacgcgacg gtgtgccggt ggtgatcgtg cgcggctatg acatacaaat taaccaggaa
      961 ggatcggtgc aggagctctt acgccccgag gcggaagatc tttttcgcta agttggaaaa
     1021 ataacatgga caacttcaca gtagctatcg tcggcggcac gggaaacttg ggcagcgccc
     1081 tggcgctccg tctgggcgcg ccgggggtta aaattatcat cggttcgcgc gatgccgaga
     1141 aagctcacaa ggcggtggaa actttgcggc ccagtttgcg cgccggcgag atgatcggca
     1201 tgaccaatca agcggcggtc aaggacgcca acttcgtggt catcgcggtc ccctacgaag
     1261 gccaggcgca gatggtgcag gatttgaaag gccaggtggc cgggaaaatt atcatcgata
     1321 cggtggtgcc gctgaataaa gtcaagcctt tcgtgcccgc cgccggatcg gcgttgcagg
     1381 aagcgcagca aattctcggc gacgaagcgc cggtgatcgg cgcgctgcat aatatctccg
     1441 ccgtcgatct cggcgatgtc gattcgccgc tgggcgacgt gctggtgtgc ggcgacaatg
     1501 gcgaggcgaa gcagaaagta atggagatca tcgagcgcat cggtgccacg gcttatgacg
     1561 ccggcccggc gagcaacgct tatgtcatcg aaggtctgac cggcgtgatc attgcgctca
     1621 accgcaagta aaaatccaag catggcagta tcaagatcac cggcatcggc gggcaatccg
     1681 gtcattgagc gcggatgctg gcgcgtttcg cttttggttc tgcctgtccc gagttaaatc
     1741 gcggcgcagc cagcgcggca gcaaagattt cgggcccgct aacaattttc ttcgggggac
     1801 caaaattcat tagtttccgc ctctgggtaa atttactacc caagggctcg ccgctccgcc
     1861 gccccagggc gtatgccata cgcccctacg ctcggatttc ctccgggaat atattttgcg
     1921 ccctttgcgt gctttgcgcg ggatattccg aaattcggtt gcggctgcgc cgcactagct
     1981 ccttcgtgtt gaaaaactct ctcccctttg gctgcgctga accccgctag aatagctgtg
     2041 cctctttggt gcatccttcc gatcgttcgg ggccccggtt gcctcgagcg aaaatcatac
     2101 taatccgcta acttaggtat tccccctggc aagataggcg gtgttaacct ttgccgggct
     2161 gaggcgtcta atggttaaac ggctggaccg atcgccagcg tttaacagcc atggaaagca
     2221 cgcaggatct cggcgacgaa gtattggtgg ccttgtgtca acaggggcag gccgattgct
     2281 tcgaggtatt ggtgcggcgt tatatggaaa aggcgtttca catcgcttac aacttcacgc
     2341 gtaacacgga gaccgccaaa gatctctcgc aagacgcttt tctgcgcgcc ttcgccaata
     2401 tcaagcgttt tgacgggcga tcgagtttct atacttggtt ttatcggatc gtcgtcaatc
     2461 tctgcttgga tcatgcgcgg cgcagtggca gggtgatgtg ggagtcgctg gacaagagtg
     2521 ccggggaagc gggcgggcag cgccagttag tcgacaccca gtatcagccg gatcagcagg
     2581 cgatcgccgg cgaagcgacg cggcgcgcca acgcgaccct ggagtcgatg cccaacaagc
     2641 aacgcacggc atttctactg aggaaccatg aaggtctgcc gatcgccgat atcgccaaag
     2701 tgatgaaaac caccgaagga accgttcggg tatatctgca cagggcggta gcggcacttc
     2761 gccacagcct ggtggagttc gtttaggggg agtttatgga aaatcatgtt gcgccgctcg
     2821 aaggcgcctg caaaaactac gaagaagatt tggtgctcta ctactacggc gagagcggcg
     2881 ccgccgagcg cgcggcgatg gagcagcata tgacgcagtg cggccgctgc cgcaactttg
     2941 tcgacgatct cggccgtgtc ctaccgcaga tggcaccgca gccggaactg ccgcagccgt
     3001 tctgggatag ttactttcgt gaaaccatgg cgaagctgga cgcgcatgag gcgcgacaga
     3061 gttggtggcg cggttggttc gcaccgctga acggttggct ggtgccggcc ttcggcacga
     3121 tggcggtggc ggctttggcg atcg
//
LOCUS       DATIRS010000598         2294 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1814768, whole genome shotgun sequence.
ACCESSION   DATIRS010000598 DATIRS010000000
VERSION     DATIRS010000598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2294
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1814768"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..422)
                     /locus_tag="VLM90_07550"
     CDS             complement(<1..422)
                     /locus_tag="VLM90_07550"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSQ12855.1"
                     /translation="MRAADALVDILKTEGVKFVSTLPGDDILPIFDALHENGRVKLIL
                     TRHEQATVYIADGYARSTGEVCVAMVTKGPGRCNAFTAIVNAFTDCVPLVVIFGHSSR
                     QQLAKGMLQEVPYLDTFQTMAKWTFSVPSAERIPEVFRR"
     gene            complement(435..1439)
                     /locus_tag="VLM90_07555"
     CDS             complement(435..1439)
                     /locus_tag="VLM90_07555"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhnD/SsuA/transferrin family substrate-binding
                     protein"
                     /protein_id="HSQ12856.1"
                     /translation="MKRIVTRILLAMLVCAPVVIAQRLEAAQPKKLRLAFSAFAYANP
                     PFWIGHELKLFEKYGGYETELVYVGGSRPIQAMLGGSIDVSQVGGAAAVAAASQGAEI
                     SILETVFTRLTFAIHASPQIKQIADLKGKIIAAGAVGGNSYFAALVFLKQFGWVANRD
                     VGVTPAGGSPEVLAGLLQGKFQAGVLTPPTSTMAAKQGHREIFDLASLDFPFPVISVV
                     STRRFIDANPEVILNILRATCEAIYLYKTRPELTVPVVAKYMRVAKDDPAVVEAQRTI
                     GQLLNQNLPPSLEGVRFVLDHYAERQPSLINKNPADFVDMRFVRKLEEEGFFKKFASK
                     "
     gene            complement(1784..>2294)
                     /locus_tag="VLM90_07560"
     CDS             complement(1784..>2294)
                     /locus_tag="VLM90_07560"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: protein motif:HMM:NF014641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006780 - uroporphyrinogen III biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006782 - protoporphyrinogen IX
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HSQ12857.1"
                     /translation="ELALQAAITVPEPNTWREILSTLDTAVEVRGKRIAIQEYGIANP
                     ELIAALEQRGAIVTAIPIYRWALPEDLAPLRDAIVKIVHGDADVALFTNGAQVDHVFR
                     IAGLDKATEALHQGFKKIVIGSVGPVCTQILRQFGLEPDIEPVHPKMGSLIAEVAVRA
                     RDVLAKKSS"
BASE COUNT          498 a          676 c          664 g          456 t
ORIGIN      
        1 cggcgaaaca cttcgggaat tctttccgct gacggcacgc tgaacgtcca cttcgccata
       61 gtctgaaacg tgtcgaggta aggcacttcc tgcagcatgc ctttggccaa ttgctggcgc
      121 gaactatggc cgaagataac cactagcggc acgcagtcgg tgaacgcgtt gacgatggcg
      181 gtgaacgcat tgcagcggcc cggccccttg gtgaccatcg ccacgcagac ctcgccggtg
      241 ctgcgcgcgt agccgtcggc gatgtagacc gtcgcctgct cgtggcgcgt caagatcaat
      301 ttcacccggc cattttcatg gagggcgtcg aagatcggca agatgtcgtc ccccggcaac
      361 gtcgaaacaa acttcacgcc ttcggttttg agaatgtcga ccagtgcatc ggcagcgcgc
      421 atgttttgtt ctttctattt gctggcaaat tttttgaaga agccctcttc ttcgagctta
      481 cgaacgaacc gcatatcgac gaagtcggcg ggattcttat tgattaaact gggctggcgc
      541 tcggcgtagt ggtcgagcac gaagcgcacg ccttcgaggg acggcggcag attttgattc
      601 aacagttggc cgatggtgcg ctgcgcttcg accaccgccg gatcgtcctt ggccacgcgc
      661 atatacttgg ccaccaccgg cacggtcagc tcgggacggg tcttgtacaa ataaatcgct
      721 tcgcacgtcg cgcgcaaaat attgagaatc acctcggggt tggcgtcgat gaaacggcgc
      781 gtgctgacca ccgagatcac cgggaacgga aagtcgagac tggcgagatc gaagatttca
      841 cgatggccct gtttcgccgc catggtcgat gtcggcggcg tcagcacgcc ggcctggaat
      901 ttaccttgga gcaatccggc caaaacttcc ggcgatccgc ccgccggggt cacgccgaca
      961 tcgcgattgg ccacccaacc gaactgcttg agaaatacca aagcagcgaa ataactattg
     1021 ccgccgacgg cgccggcggc aatgattttg cccttaagat cggcaatctg cttgatctgc
     1081 ggactggcgt gaatcgcgaa ggtcagccgg gtgaacacgg tctcgagtat cgaaatctcc
     1141 gccccctgcg acgccgccgc caccgctgcc gcgccgccga cctgtgaaac atcgatggag
     1201 ccgccgagca tcgcctggat cggccgcgaa ccaccgacat acaccagctc ggtctcatag
     1261 ccgccgtatt tctcgaacag ttttagttca tggccgatcc agaacggcgg attggcgtag
     1321 gcgaaggcgc taaaggcgag gcgaagcttc tttggctgcg cggcttcgag ccgctgcgca
     1381 atgacaaccg gcgcgcaaac cagcatcgcg agaaggatgc gagtaacgat tcgtttcatt
     1441 gaatgcacca ctcggatgaa cagcctgaga catattggca aacgattcgg cagtcaaggc
     1501 gcaatgtaat tctgagcccc ttcgacatgc tcaggataaa ctccggcgaa gaatctcgtc
     1561 ttcgtctcca gataagaatg caagatgctt cgcgttgctc agcatgacag ccgaaggatt
     1621 ctgccttacg acacagtccc cagccagcga gaatgaatcg tcaacgtagg ggcagacccc
     1681 tgtgtctgcc ctccggaatg ggcgaccacg gggaatcgct cctgccggag aattcattag
     1741 tgaaccacta cccgacggtg gaatgacgaa ggaatgagag attctaagac gattttttcg
     1801 ccagcacgtc ccgcgcccta accgcgacct cggcgatcaa cgagcccatc ttcggatgca
     1861 ccggctcgat gtcgggctcg aggccaaact ggcgcaggat ctgagtgcac accgggccga
     1921 cggagccaat gacgatcttc ttaaaaccct ggtgcaaagc ctcggtggcc ttatcgaggc
     1981 cggcaatccg aaaaacatga tcgacctggg cgccgttggt aaacagcgcc acatcggcgt
     2041 cgccgtgaac aatcttcaca atggcgtcgc gtagtggcgc cagatcctcg ggcaatgccc
     2101 agcgatagat tggaatcgcg gtgacgatgg cgccgcgctg ttccaatgcg gcgataagct
     2161 cgggattggc gatgccgtat tcttgaatcg cgatgcgctt gccgcgcacc tcgacagcag
     2221 tgtccagggt cgagagaatt tcgcgccagg tgtttggttc cggcacggtt atcgccgctt
     2281 gcagtgccaa ttcc
//
LOCUS       DATIRS010000599         2283 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_831548, whole genome shotgun sequence.
ACCESSION   DATIRS010000599 DATIRS010000000
VERSION     DATIRS010000599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2283)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2283)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2283
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_831548"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(116..1279)
                     /locus_tag="VLM90_07565"
     CDS             complement(116..1279)
                     /locus_tag="VLM90_07565"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HSQ12858.1"
                     /translation="MNATQTLARYALKLRYRDIPSEVIERAKACILDTLAVSLYGSTK
                     PWSKTVSEFVRSAGSKGNATVFGAKQKASPERAALANGTMAHAFELDNVRQPGAGVHP
                     GATAFLPAFAVAENEKADGKALLTAFIAGCEVMSRIGVAAGNSLERRGFHAPGLTGTF
                     GAAVAAGRLLKLKEKQLVNALGIAGSYSAGLIEFSRCQEGAMIKRLHLGKAAEGGVTA
                     ALLASRGFAGPESVLEGKFGFCQSFSDSPKLEYLTHRLGKEWESMNICIKRCACHINA
                     HAPIEAMQNLRADLGFRPDDIRAITIGGIEKLLSHHANYQPTDLMMAQYSIPFCAALS
                     VYFDPTDPANFNAGKLKDKKIAALMRKIHLEVDHEIEEKGWDRAARVIIELAD"
     gene            complement(1289..>2283)
                     /locus_tag="VLM90_07570"
     CDS             complement(1289..>2283)
                     /locus_tag="VLM90_07570"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HSQ12859.1"
                     /translation="SPPMRRISYLFPVALVGAVMLLPLPGASQEFKPSKQVETVVHTG
                     PGGGSDLFARAIAEMLQNVKLIAQRMQVVNKSGGGPAVAMAYLAEKKADTHTVGFYTG
                     VWVTNPLTTVEATVTLKDLTPISRLVLEPAVIAVKADSPYKTVKDFVEAAKKNPKQLN
                     QSGGTILSRDNLMRLLLQKATGAQWNFISFPSGGERLSNLLGGHVQMMVIEPQEAGEQ
                     IRAGNLRVIATLTEKRLASLPNVPTIKEQGIDVPLIPQARGLLLPPAAPKEVVAYWEG
                     VFDAFVKTPSWKQYVEQNQFEDAYLKGAALNKFIDALKDQMREVLKEAGAKVIR"
BASE COUNT          427 a          626 c          699 g          531 t
ORIGIN      
        1 gccgctcggt gataatcccg cgcgtaagtt tgcttgcttt ggcgtgtact tctgcggggc
       61 tcagtggatt gtgcggcgtg cctttgaaat ggatgaccag cttcgattca cgccgctagt
      121 cggcgagttc gatgatcacc cgcgcggcac ggtcccagcc tttttcttcg atttcgtgat
      181 ccacttcgag gtgaatcttg cgcatcagcg cggcgatctt tttgtccttg agtttgcccg
      241 cgttgaagtt cgctggatcg gtgggatcga aatagacgct cagggcggca caaaagggaa
      301 tgctgtactg cgccatcatc agatcggtgg gttggtagtt ggcgtgatgg ctgagcagtt
      361 tttcaatgcc gccgatggtg atggcgcgaa tgtcatcggg gcggaagcca agatcggcgc
      421 gcagattttg cattgcttca atcggtgcgt gggcgttgat atgacaggca caacgcttga
      481 tgcagatgtt catgctctcc cattctttgc ccaagcgatg agttagatac tccagcttag
      541 gcgaatcgga aaagctctgg cagaatccga atttaccttc gagcacgctt tcgggaccgg
      601 cgaagccacg gctggccaac agcgccgcgg tgacgccccc ctcggcggcc ttgccaagat
      661 ggagccgctt gatcatggcg ccttcctggc agcgcgagaa ttcgatcaag cctgcagagt
      721 aagaaccggc gatgcccaag gcgttgacca gctgtttttc tttgagcttt aataatcggc
      781 cggcggcgac ggcggcgccg aaggtgccgg tcaatccagg cgcatgaaaa ccgcgccgct
      841 caagagagtt gccagcggcg actccgatgc gcgacatcac ctcacagccg gcgatgaatg
      901 ccgtaagcaa cgctttgcca tcggcctttt cattctcggc cacggcgaag gctggcaaaa
      961 aagccgtcgc cccgggatgc acacctgctc cgggttggcg gacattgtcg agttcgaagg
     1021 catgggccat cgtgccattg gccagggcgg cacgttccgg agacgctttt tgcttggcgc
     1081 cgaagacggt ggcgttgcct ttggagccgg cgctgcggac aaattcgctg acggttttgc
     1141 tccacggctt ggtcgagcca tagagcgaaa cggccagagt atcgaggatg cacgccttgg
     1201 cgcgctcgat cacctcgctg ggaatgtcgc ggtagcgtag tttgagcgcg tagcgcgcca
     1261 gggtctgggt tgcattcatt gccttgcctt agcgaatcac tttggcgccg gcttctttga
     1321 gcacttcgcg catttgatct ttgagggcgt cgatgaattt gttgagtgct gcgcctttga
     1381 ggtaggcatc ttcgaactgg ttttgttcga cgtactgttt ccagctcggg gttttcacga
     1441 aagcgtcgaa cacgccttcc caataggcga cgacttcttt tggcgcggcc ggcggcagaa
     1501 gcaggccgcg tgcctgggga atcaacggca cgtcgatgcc ctgctctttg atcgtcggaa
     1561 cgttcggcag tgaagccaag cgtttttccg tgagcgtcgc gatcacccgc aggttgccgg
     1621 cgcgaatctg ttctccggct tcctgcggtt cgatgaccat catttgcaca tggccgccga
     1681 gcagattgga caaccgttca ccgccgctcg ggaaggaaat aaagttccac tgggcgccgg
     1741 tggctttttg caaaagcagg cgcatgagat tgtcgcgtga aagaatcgtg ccgccggatt
     1801 gattgagctg tttaggattc ttcttcgccg cttcgacgaa atccttcacg gttttataag
     1861 gcgagtcggc cttgaccgcg atcaccgccg gctccaaaac caaacggcta atcggtgtca
     1921 agtctttcaa cgtcaccgtc gcttcaaccg tggtcaacgg attagtcacc cagacacccg
     1981 tgtaaaagcc aacggtgtgg gtgtcggcct ttttctcagc gaggtaagcc atggcgacgg
     2041 ccgggccgcc gccggatttg ttgaccacct gcatgcgctg ggcaatcagt tttacatttt
     2101 gcagcatttc ggcgatggca cgggcgaaaa gatccgagcc gccgccgggg ccggtgtgga
     2161 ccacggtttc aacctgcttg ctcggtttga attcttggct tgcgccggga agcggtaata
     2221 gcattacggc gccaactagc gcgacgggga ataaatagct gattcgtctc atcggtgggc
     2281 tcc
//
LOCUS       DATIRS010000600         1705 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_831646, whole genome shotgun sequence.
ACCESSION   DATIRS010000600 DATIRS010000000
VERSION     DATIRS010000600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1705)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1705)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1705
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_831646"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..240)
                     /locus_tag="VLM90_07575"
     CDS             complement(<1..240)
                     /locus_tag="VLM90_07575"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12860.1"
                     /translation="MPYCYPPDPNTRKPKFTPPANSCDTHFHVFGPPEVFPFLSTQEY
                     TPPAAPLEHYQKMLAVIGVERAIVVQPSVHGLDNSA"
     gene            399..1277
                     /locus_tag="VLM90_07580"
     CDS             399..1277
                     /locus_tag="VLM90_07580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12861.1"
                     /translation="MAKFRIQSHGRLQEWVAEEKGYFADAGLDYEFLVTPIVTWSAGV
                     KTVEAAPADIQRGAFESIEDGRGCNLSAACHWTVNMAAAADHGKMWGRAYSVSPSGIF
                     VPPDSHLRQPEDLANVPVTVGYHSGSHYSSLQGLEHFLRREQIKLHFGGLLLDRLALL
                     LDRQVPAASLFGAPYYVAEQLGFTKIVDTTFMIAHLVSGDPDLSDVERYFEALRRAQQ
                     DIDLEPEAFKHYFLRELPERYLGLVDTRRFGPGERIVFERYPRAAFERTRKWIESWNL
                     FPPEQKGDAGYDVAMV"
     gene            complement(1431..>1705)
                     /locus_tag="VLM90_07585"
     CDS             complement(1431..>1705)
                     /locus_tag="VLM90_07585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12862.1"
                     /translation="NLSEYIHLSIARHNWEATHRLGDVRVPTLVLIGTNDKAHSNHLL
                     QAEALKNRIPGAELKVLNGQSHGFFWQAPDQTNQVILNWVRRHTAV"
BASE COUNT          327 a          446 c          547 g          385 t
ORIGIN      
        1 tgcgctgttg tcgaggccgt gcacgctcgg ttggacgacg atggcacgct cgacgccgat
       61 caccgcgagc attttttgat aatgctccaa tggcgccgcc ggcggcgtgt actcctgggt
      121 tgagaggaag ggaaatactt cgggcggccc aaagacatgg aagtgcgtgt cgcaggagtt
      181 ggcgggcggc gtgaacttgg gcttgcgcgt gttgggatcg ggcggataac agtagggcat
      241 ggcggctatc tccatgttgg ggctgggcaa tgttttaact tagcggcaac ggtaagtcca
      301 ccaacattgg gggcttgatt atgctttggt ctcaagagta gtaatgggtt cgcaagtagg
      361 cgagttcgaa tttcgaaatc cgagaggctg gaggacacat ggcaaagttt cgcatacagt
      421 cgcacggacg cttacaagag tgggtggcgg aggagaaagg ttatttcgca gacgccggcc
      481 tcgattacga gttcttagtc acgccgatcg tcacttggtc ggccggcgtg aagaccgtcg
      541 aagcggcgcc cgccgatatc cagcgcggcg cgttcgagtc catcgaggat gggcgcggct
      601 gcaatctgag cgcggcttgc cactggacgg tcaacatggc ggcggcggcg gatcatggca
      661 agatgtgggg ccgggcatac tcggtctcgc cgtcgggaat ctttgtgccg ccggactccc
      721 atctgcgcca gcctgaagat ctcgccaatg tgccggtgac ggtgggctat cattccggca
      781 gccactactc gtcgctccaa ggtctcgaac attttctcag acgggagcaa atcaaactac
      841 actttggcgg cctgctgctc gaccgcttgg cgctgctcct cgatcgccag gtgccggcgg
      901 caagtttgtt cggcgcgccg tactacgtcg ctgagcagtt gggcttcacc aagatcgtcg
      961 ataccacatt tatgatcgcc catctggttt ccggcgaccc cgacttgagc gacgtggagc
     1021 gttacttcga agcgctgcgc cgcgcccagc aagatatcga tctcgaaccg gaggcattca
     1081 aacactattt cctccgcgag ttgcccgagc gctaccttgg actggtcgac acgcgacgct
     1141 ttggccccgg cgaacggatc gtcttcgagc gttacccgcg cgccgccttc gagcgtacac
     1201 gcaagtggat cgagtcgtgg aatctatttc cacccgaaca gaagggagac gccgggtacg
     1261 acgtggcgat ggtttaaagg agtaagaaag tattcaccac gaagattgcg aagcaggggg
     1321 acgatcagga acggtgggtt tatatcccaa tcctacgaaa ccttcgtgat cttcgtgtcc
     1381 ctcgtggtgg gtgggattcg agttttttag cgggctcctc aaccttagat ttacacggcg
     1441 gtgtgtcgtc ttacccagtt gagaatcacc tggttggttt ggtccggcgc ttgccagaag
     1501 aagccgtggg attggccatt gagtactttg agttcggcgc cgggaattct gtttttcaat
     1561 gcttcagctt gtagcagatg gttgctgtgc gctttgtcgt tggtgccgat cagcaccagg
     1621 gtcggaacgc gcacgtcgcc taaacggtgc gtggcttccc agttgtggcg ggcgatgctc
     1681 aagtggatat attcggacag gttgg
//
LOCUS       DATIRS010000601         1822 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1225201, whole genome shotgun sequence.
ACCESSION   DATIRS010000601 DATIRS010000000
VERSION     DATIRS010000601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1822
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1225201"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(240..1019)
                     /locus_tag="VLM90_07590"
     CDS             complement(240..1019)
                     /locus_tag="VLM90_07590"
                     /EC_number="4.1.3.34"
                     /inference="COORDINATES: protein motif:HMM:NF004868.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citryl-CoA lyase"
                     /protein_id="HSQ12863.1"
                     /translation="MAEPAKVVTGIGKAELHRILVRGYDLNKELVGHITFTGMTSLIL
                     RGRLPTENEAKMLDALMIILVEHGMVSHVIAARLIYHCAPEAMQAAVAAALCGAGSVH
                     LGSSEWSAKMLADALPAETKNPAYDEIATKIIDDYTARKQRMPGIGHRTHAEGDPRAE
                     TLFNIARSTEVYGKYCELIQRLSKLSSDRRQRLIPVNVTGAIAAIALDMGYPWQISKA
                     FALIGRTLGAIGHIAEEIQNPMAPQIDLAIKQALVYEPVRT"
     gene            1156..>1822
                     /locus_tag="VLM90_07595"
     CDS             1156..>1822
                     /locus_tag="VLM90_07595"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HSQ12864.1"
                     /translation="MADYAKEHYDFPLTKKSEHKPLKGVRVIDAGNMVAAPFATVLLA
                     DFGADVIKIEHPKYGDGQRKLEPIMDGIPLWWKSVSRNKRCITLDLGKPEGADIFKRL
                     VKGSDVIVENYRPGTFEKWGIGYDAIRAIDPRVIMLRISGFGQTGPYKNRAGFGRVAE
                     AMSGLTNLIGEPDGPPMSPGYPLGDLIAGIFGSLSVMMALYHRDLRGGEGQMIDLALY
                     EAVF"
BASE COUNT          361 a          489 c          567 g          405 t
ORIGIN      
        1 gacgcgcgtg ctgagaatgt tttggtatga catgcagtgc tcctccaagt tggccgcatt
       61 agaacaaaaa ggcgggacgg gagcaaatgc aacgtctatg gcggcttatg gactcaccac
      121 gaaggtcacg aaggacacga agggttcgga tatttcggat aatttgaact ccgaccttcg
      181 tgatcttcgt gtccttcgtg gtgaagaggt ctttcccagt tggttgcgac tttgccgcgt
      241 taggtgcgca ccggttcgta aaccagcgct tgcttgatcg cgaggtcgat ctgcggcgcc
      301 atggggtttt ggatttcctc tgcgatatgg ccgatggcgc ctaaagttct accaatcagc
      361 gcgaaggctt tggagatctg ccagggataa cccatgtcga gggcgatggc tgcgatggcg
      421 ccggtgacgt tgaccgggat caagcgctgg cgccggtcgc tggagagttt cgatagccgc
      481 tgaatcagct cgcaatattt gccgtagact tccgtgctgc gggcgatgtt gaaaagcgtc
      541 tcggcgcggg gatcgccttc cgcatgagtc cggtggccga tgccgggcat gcgctgtttg
      601 cgcgcggtgt agtcgtcgat gattttcgtg gcgatttcgt cgtaggcggg atttttggtt
      661 tcggcgggca gggcgtcggc gagcattttc gccgaccatt ccgacgagcc caaatggacg
      721 ctgccggcgc cgcacagcgc cgcggccacg gccgcctgca tcgcttccgg ggcgcagtga
      781 tagatcaagc gcgccgcgat gacgtgggag accatgccat gctcgaccag gatgatcatc
      841 agggcgtcca acattttcgc ctcgttctcg gtgggcaacc ggccgcgcaa gatcagcgag
      901 gtcatgccgg tgaatgtgat gtgtccaacc aactccttat tcaaatcgta gccgcgcacg
      961 aggatgcgat gtaattcggc tttgccgatg cctgtaacta cctttgcggg ttctgccatt
     1021 gtctattcct ccatcgataa attttgctcg tttggatata ggccaggcgg gatggcatcg
     1081 tcaaacgagc ctggtttatt tccgaagttt tttatgcgta aaatgcccgg actgaaaaga
     1141 gggacaaagc ataaaatggc tgattacgcg aaagaacatt atgattttcc tctgaccaaa
     1201 aagagcgaac acaaacccct caaaggcgtg cgcgtgatcg acgccggcaa catggtggcg
     1261 gcgcccttcg cgacggtgtt gctcgccgac tttggcgccg atgtgattaa aatcgagcat
     1321 ccgaaatacg gcgacggcca gcgcaagctc gaaccgatta tggacggcat cccgctgtgg
     1381 tggaagtcgg tgtcgcgcaa caagcgctgc ataaccctcg atctcggcaa gccggaaggc
     1441 gcggacatct tcaaacggtt ggtcaaaggc agcgatgtca tcgtcgagaa ctaccgtccc
     1501 ggcactttcg agaagtgggg catcggctac gacgcgattc gggccatcga tccgcgcgtc
     1561 atcatgctgc gcatttccgg cttcggccag accgggccgt ataaaaaccg cgccggcttc
     1621 ggccgggtcg ccgaagcgat gagcggtttg actaatctaa tcggcgagcc ggacggcccg
     1681 ccgatgtccc cgggttatcc gctgggcgat ttgatcgcgg ggattttcgg ttcgctgtcg
     1741 gtgatgatgg cgctctatca ccgcgatctg cgcggcggcg aaggccagat gatcgatctg
     1801 gcgctctatg aagcggtctt cc
//
LOCUS       DATIRS010000602         2197 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1520050, whole genome shotgun sequence.
ACCESSION   DATIRS010000602 DATIRS010000000
VERSION     DATIRS010000602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2197
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1520050"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..363)
                     /locus_tag="VLM90_07600"
     CDS             complement(<1..363)
                     /locus_tag="VLM90_07600"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase-like protein"
                     /protein_id="HSQ12865.1"
                     /translation="MKKSLELVMFDLDGTLADTGHDLADSVNFTRGHFNLPPLPSPAV
                     YANVGRGVEHLLKQSLPDAGEASFRTIMQVFLDRYENHLLDRTVLYPGVAEVLRYFRG
                     KRRAVVSNKMHRLTVAVVQ"
     gene            486..1481
                     /locus_tag="VLM90_07605"
     CDS             486..1481
                     /locus_tag="VLM90_07605"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12866.1"
                     /translation="MALIRCAEALASLALFLLVAPNFAAAQKLNTAYISTTPGTSTVI
                     QVAKEARLFEKHGIDATVIFISGSVRGIQSILAGEIPIGEGGGPGLASARLAGGDVVA
                     IAGNVNVLPYYLVSHPSIKRHEDLKGKIGGTHIAGTTAEFALKVGLKRIGLDPLKDVS
                     LRVIGGAIERMVALQKGIVQFTVVTEAGKSQAERLGYPTVVDMVTLQIPFPQNGIYTS
                     TKLIRENPDLVRRYMRAYVEALHFYKTHKEDTLKFMRKYSRIDDRRMLDEAWDWHAKF
                     MPEAPYPPADGYQLVLQDLAEKNPKAAQANVKDYIDTRFVKELEDSGFIKSLYRR"
     gene            complement(1597..2052)
                     /gene="grdA"
                     /locus_tag="VLM90_07610"
     CDS             complement(1597..2052)
                     /gene="grdA"
                     /locus_tag="VLM90_07610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_081459675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(1927..1929),aa:Sec)
                     /transl_table=11
                     /product="glycine/sarcosine/betaine reductase complex
                     selenoprotein A"
                     /protein_id="HSQ12867.1"
                     /translation="MQKGKKIIAIGERDGVTGPVIAECLEGAGYEVVFQATECFVUTA
                     AGAMNFENQGVIKRLADQYGPENLTVVLGNGEANGVEVFAETVTEGDPSFAGPLAGVA
                     LKIPVYHVLEADVMGQVPESLRDEKLQLSALVIDIEPMHQVLEASRAKL"
BASE COUNT          489 a          669 c          580 g          459 t
ORIGIN      
        1 ttgcaccacg gccaccgtga gccggtgcat cttgttgctc accacggcgc gccgcttgcc
       61 gcgaaagtag cgtaaaactt ccgccactcc gggataaagc acggtgcgat cgagcaggtg
      121 attttcatac cggtcgagaa acacctgcat gattgtgcga aaactcgcct ccccagcgtc
      181 gggtaaggac tgcttgagca aatgctccac gccgcggccg acgttggcgt acaccgccgg
      241 cgacggcaac ggcggcaggt taaagtgccc acgcgtaaaa ttaaccgagt cggccaggtc
      301 atggccggta tcggccaggg taccgtcgag gtcgaacatc accagttcta aagatttttt
      361 cattggcgag tcagcaaaat agacttccat gccagccctg tcaaatcagc ttttctcgca
      421 gcgcttgaag tgctatttgt agctggaacg gaatccacac gccaaacccc tcgggaggta
      481 ttcgcatggc tctgattcgc tgcgctgaag cgctcgcctc gttggcgctg tttttactgg
      541 ttgcgccaaa tttcgccgcc gcccagaagc tcaacaccgc gtatatctcg accacgccgg
      601 gaacttcgac ggtgatccag gtcgccaagg aagcgcgcct gttcgagaaa cacggcatcg
      661 acgccaccgt tattttcatt tccggcagcg tgcgcggcat ccagtcaatt ctcgcaggag
      721 aaattcccat cggcgaaggc ggcggcccgg gcctggccag cgcgcggctc gccggcggcg
      781 acgtcgtcgc catcgccggc aatgtcaacg tgttgcccta ttatctagtt tcccacccga
      841 gcatcaaacg gcatgaagat ttgaaaggta agatcggcgg cactcatatc gccggcacca
      901 ccgccgagtt cgccttgaaa gtggggctga aacgcatcgg gctcgacccg ctcaaagatg
      961 tcagcttgcg cgtcatcggc ggcgccatcg agcgcatggt ggcgctgcaa aaaggcatcg
     1021 tccagttcac cgtggttacc gaagccggca aatctcaggc cgagagactc ggctatccga
     1081 cggtggtcga catggtcacc ctgcaaatcc cctttccgca gaacggcatt tatacatcga
     1141 caaagctgat ccgcgaaaac cccgacctgg tgcgccgcta catgcgcgcc tacgtcgagg
     1201 cgctgcactt ctacaaaacc cataaggaag acaccttgaa gttcatgcgc aaatactctc
     1261 gcatcgatga ccgccgcatg ctcgatgaag cgtgggattg gcacgccaag ttcatgcccg
     1321 aagcgcccta cccgcccgcc gacggctatc aactggtgct gcaagattta gccgagaaga
     1381 atcccaaagc cgcccaggcc aacgtgaaag attacatcga cacgcgcttt gtgaaggaac
     1441 tggaagattc ggggtttatt aaaagccttt atcgtcgata aaggctggtt caaatcgttc
     1501 aagcagttca agtcgttcaa aacgtcagaa gttcggaggg ttttatccga tgcgttttac
     1561 ggcttgaacg atttgaacgt tttgaacggc ttgaactcac aattttgccc gcgaagcttc
     1621 gagcacctga tgcatgggct cgatatcgat gactaatgcc gagagctgta atttctcgtc
     1681 gcgcagggat tccggcacct gacccatcac gtccgcttcg agcacatgat aaacggggat
     1741 cttgagcgcc acaccggcca gcggcccggc gaaactcgga tcgccctcgg tcaccgtctc
     1801 agcaaacact tcgacgccgt tagcctcgcc gttgcccaac accacggtca aattttccgg
     1861 accatactgg tccgccaggc gcttgatgac tccttggttc tcgaagttca tcgcgcccgc
     1921 ggcggttcaa acaaagcact cagtagcctg aaaaaccact tcgtatcccg cgccttcgag
     1981 acactcggcg atgaccgggc cggtgacacc atcccgttcg ccgatggcga tgatcttttt
     2041 acccttttgc atgcatcctc cgatatcgtt ttgcgttccg tattctccga actttgcgcg
     2101 ctttgcgcct tagcgggagg tatattccga gttaaccctc attccgatcg accagaaacg
     2161 agcagccatc cgacagctgt gtcatgcggc caagaaa
//
LOCUS       DATIRS010000603         3108 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_635208, whole genome shotgun sequence.
ACCESSION   DATIRS010000603 DATIRS010000000
VERSION     DATIRS010000603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3108)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3108)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3108
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_635208"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..534
                     /locus_tag="VLM90_07615"
     CDS             <1..534
                     /locus_tag="VLM90_07615"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12868.1"
                     /translation="PLFDPLFDELNRRQAVVLIHPTHCEAPKHTGLRAPPFAVEYVFD
                     TTRAIVNLIYTGTLKRCPDIRFIVAHGGGTVPYLAERIAMMEGHRGATKVTDVIPTLR
                     ALYYETASTTSVFALRSLQEFAEPTHILWGSDLPFVYGPRLQREVEHWEHYAGFDDAA
                     RRAIEEQNALRLFPRFA"
     gene            771..1919
                     /locus_tag="VLM90_07620"
     CDS             771..1919
                     /locus_tag="VLM90_07620"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HSQ12869.1"
                     /translation="MQINIIGAGPAGLLFALLIKRRYPSWQVNVFEQNPPDATFGFGV
                     VFSLNALAFLERDVSDFHALLVPRLESWPMQRIVHRDERVEIDGNGFSAIGRLELNQF
                     LDALCRAAGVSVIYNQFIESLAQVKDCDLLVGADGANSFVRRALEVEFQLKTEWLTNR
                     FAWYGTTQPFECLSLTFRANADGHFVAHHYRHSQTMSTFVVECDEATWRRAGLDRMSV
                     DASRAYCERVFAPDLSGHSLVSNKSIWRQFPLLVTNRWAVGNAVLLGDAQRTVHFSIG
                     SGTRLAFEDAIALDRAFADAGDDAPRALKLFERERRPIVEKIVAAANASSYWYERIAE
                     KMKLEPWQLAYDYMTRSGRMTDERLRELSPKFMARIDRERSAGARQGS"
     gene            2001..2765
                     /locus_tag="VLM90_07625"
     CDS             2001..2765
                     /locus_tag="VLM90_07625"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSQ12870.1"
                     /translation="MSNDKPAALVTGAATGIGRSAAVALAQNGYDVAVNFSRSEDAAR
                     ITARACEAAGARALLYRADVSDDAAVRAMLAATEQEFGRLDVLINNAGTTVDVEPKNF
                     EAMTVEDWNRVFNVNVLGLFLVTRAATSLLKKSPNGCIVNTCSIAGLRPSAQPLPYAA
                     SKAAVANLTKTLANALGPQIRVNAVAPGWIEGEWMKRTLAENYQGLMARRAKYTPLNR
                     CCTEDDVADSMLSLILHNRFVTGEIIIVDGGFASTT"
     gene            2927..>3108
                     /locus_tag="VLM90_07630"
     CDS             2927..>3108
                     /locus_tag="VLM90_07630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12871.1"
                     /translation="MLDGVVRFPPEFAARYRAKGYWEDRSLRDTFDELFARHAERVAV
                     IDRDQAVTYEQIDKRST"
BASE COUNT          655 a          985 c          878 g          590 t
ORIGIN      
        1 cccttgttcg atccattgtt cgacgagctc aaccggcgcc aagccgtggt gttgatccat
       61 ccgacccact gcgaagcgcc caaacacact ggcttacgcg cgccgccatt cgcggtcgaa
      121 tatgtgttcg acaccacccg agccatcgtc aatctgattt ataccggaac gctcaagcgt
      181 tgccccgaca tccgcttcat cgtcgcccat ggcggcggca cggtgccgta tctcgccgag
      241 cgcatcgcca tgatggaagg ccaccgcggc gccacaaagg taactgacgt gattcccacg
      301 ctgcgcgcgc tctactatga gaccgcgagt accacgtctg tattcgcgct ccgctcgcta
      361 caggagttcg ccgagccgac ccatatcctg tggggctccg acctgccctt tgtctacggc
      421 ccgcgcttgc agcgcgaagt cgagcactgg gaacattacg ccggcttcga cgacgcagcg
      481 cggcgcgcta tcgaagaaca aaacgcgtta agactatttc cccgcttcgc ctagcgtagc
      541 tcggagaatt ggccgcaaag aacgcaaagg gcgcacaaaa gaaatcggaa tatctctcgc
      601 aaacacgcaa agacgcaaag gccgtagagg aaaaatgtca tttcgaccga agggagaaat
      661 ctttcttaga tccctcgcat ccactcggga tgacgggcct cggcccgtca cttagcgtct
      721 ttgcgccttt gcgagaggaa tatccgaaat agaatgcgag tgacgtttcg gtgcaaataa
      781 acatcatcgg cgccggtccc gccggccttc tcttcgcgct gctgatcaag cgccgctatc
      841 caagttggca ggtcaatgtc ttcgagcaga acccgcccga cgccaccttc ggtttcggcg
      901 tggtgttctc gctcaatgcc ctcgcgttcc tcgaacgcga cgtgtccgat tttcacgcgc
      961 tgttagttcc gcggctagaa tcctggccca tgcagcgtat agtccaccgc gacgagcggg
     1021 tggaaatcga cggcaacggt ttctcggcca tcgggaggtt agaactcaat caatttctcg
     1081 acgcgctgtg ccgcgccgcg ggcgtgagcg tcatctacaa ccaattcatc gaatcactcg
     1141 ctcaagtaaa ggactgcgat cttctcgtcg gcgccgatgg cgcgaactct ttcgtgcgcc
     1201 gcgccctgga agtggaattc caactcaaaa ccgagtggct caccaaccgc ttcgcctggt
     1261 acggcacaac gcagccgttc gagtgtctta gcttaacctt ccgggccaac gcagacggcc
     1321 acttcgtcgc gcaccattac cgccacagtc aaacgatgag cacgttcgtc gtcgaatgcg
     1381 atgaagcgac ctggcgccgc gccggcttgg atcgaatgtc cgtggatgcc agccgcgcct
     1441 actgtgagcg ggtcttcgcg ccggatttaa gcggccattc gctggtatcc aataaatcca
     1501 tctggcgcca gtttccgctg ctggttacca accgatgggc ggttggcaac gccgtgctct
     1561 tgggcgacgc ccagcgcacc gtgcattttt ccatcggctc gggcactcgc ctggcattcg
     1621 aagatgccat cgctctcgat cgcgccttcg ctgacgcggg cgacgatgca ccgcgcgcgc
     1681 tgaaactctt cgagcgcgag cgccgcccca tcgtcgaaaa aatcgtcgcc gccgccaacg
     1741 ccagctccta ttggtacgag cgcatcgccg agaaaatgaa gttggaaccc tggcagctcg
     1801 cctacgacta catgactcgc agcggccgca tgaccgacga acggttgcgc gagctgtcgc
     1861 cgaagttcat ggcgcggatc gatcgcgagc gcagcgcagg cgcgcggcag ggttcctagc
     1921 tgggttcata cgcgccggcg gcgccgagag catcgccgcg ttgacggcga ttcgactttt
     1981 ttgctacaag caaagccacc atgagcaacg ataaacccgc cgcgctcgtc accggtgcgg
     2041 ccaccggcat cggtcgcagc gccgccgtgg cgttggcgca aaacggctac gatgtagccg
     2101 tcaattttag ccgcagcgaa gacgcggcga ggatcacggc gcgcgcatgc gaagctgcgg
     2161 gtgcccgcgc gctgctctac cgggcggatg tcagtgacga cgccgccgtg cgcgccatgc
     2221 tggcggcgac cgaacaggaa ttcggcagac tcgacgtgct gatcaacaat gccggcacga
     2281 cggtcgatgt cgagccaaaa aatttcgaag ccatgacagt cgaagactgg aaccgagtct
     2341 ttaatgtgaa cgtcctaggg ttatttctgg tcacccgggc ggcgacatcc ctactgaaaa
     2401 aatcgcccaa cggctgcatt gtcaacactt gcagcatcgc cggcctaaga ccgagcgccc
     2461 agccgctacc ttacgcggca agcaaagcgg cggtagcgaa cttaaccaag acgctggcca
     2521 acgcgctcgg accgcaaatc cgcgtcaacg cggtggcgcc cggctggatc gaaggcgagt
     2581 ggatgaagcg gaccctggcg gagaactacc aaggcttgat ggcgcgccga gcgaaataca
     2641 cgccgctcaa tcgctgctgc accgaagacg atgtcgccga cagcatgctg agcctcatcc
     2701 tacacaaccg cttcgtcacc ggcgagatca ttatcgtcga cggcggcttc gccagcacca
     2761 cataaaaaaa tgccgttcca aatgttccag tcgttccagt agttccaatc gtttccggag
     2821 gatctagcgt taaaatgttc gtgctgttca tatcttattc cggcacctta aacgtttgga
     2881 acaactggaa cggttggaac gcgacgagcg cagcgaggag taaagagtgt tagacggtgt
     2941 cgtccgcttt ccgcccgagt tcgccgcgcg ctaccgcgct aagggctatt gggaagatcg
     3001 ctcactgcgc gatactttcg atgaactttt cgcccgccac gcggagcgtg tcgccgtcat
     3061 cgaccgggat caagccgtca cctatgagca aatcgataaa cgttcgac
//
LOCUS       DATIRS010000604         2985 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_142714, whole genome shotgun sequence.
ACCESSION   DATIRS010000604 DATIRS010000000
VERSION     DATIRS010000604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2985)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2985)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2985
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142714"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            286..633
                     /locus_tag="VLM90_07635"
     CDS             286..633
                     /locus_tag="VLM90_07635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12872.1"
                     /translation="MKIVRLYTGADNESHFEDIELDMNPQGVDLVAALQPAHGVMFRS
                     APPSHRSSYHCVPRRQYVITLSGQVEIETGNGTIRRFGPGDVMLADDTTGRGHMTRVV
                     GNQPRHYVFIPLK"
     gene            721..1818
                     /locus_tag="VLM90_07640"
     CDS             721..1818
                     /locus_tag="VLM90_07640"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12873.1"
                     /translation="MMVATLGIALPEIRQTFSLSELQAGSLFSVMMLIAAVTSAIAGR
                     LADRIGRKTVLITGLSLLAAGFGCAGITDHPVLFFLLLAVTGVGYGFTPPSLYAIMSD
                     LLPNRRGLGASLVSVTYGIGGAIGAVLASRITAAFGWRAAFITVGIIAAADMLLQLCW
                     IRDTHPRRSAAQSGSFRAALSFSILILALAEFIGGSVFWASAAWTPTLLRSAKHLSLQ
                     ETGWIMGILSVANMVGSFTLGNLSDMFGRKRVIALSAFPAATAAFVLFYWLQSPLSLA
                     IGIAVFGVVKASVPALVVALAQEAAPPGNAGTASGIIMALHYFAGVVAPLIAAQIIAA
                     TGDIVLAMILTTALPLVLYGCLICAVRERAR"
     gene            complement(2152..2472)
                     /locus_tag="VLM90_07645"
     CDS             complement(2152..2472)
                     /locus_tag="VLM90_07645"
                     /inference="COORDINATES: protein motif:HMM:NF017273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlD domain-containing protein"
                     /protein_id="HSQ12874.1"
                     /translation="MVFTRLELIFILGLSALVLRALPQMFLVGKSFPDLWDRLLRYLS
                     YALLCGLISITLFMSGARFDMQAAPYRAIALAVTIAIAYKTKSAVTGMLVGAVVVSLF
                     SWLR"
     gene            complement(2454..>2985)
                     /locus_tag="VLM90_07650"
     CDS             complement(2454..>2985)
                     /locus_tag="VLM90_07650"
                     /inference="COORDINATES: protein motif:HMM:NF015549.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HSQ12875.1"
                     /translation="GKSAATVLIAGLLMNLRFLPMSMALAPFFRGVKRLPLMIASHVV
                     SASSFIVPYLHFQKEREASGGKSVADGYGNLGFFAGIGATAFTVWVVGTAAGYGVGLS
                     FPPGFEEALKFILPGYFAGLLVAEMKGKTMPLICLASIVTAIPGALFNLGWGWLATSA
                     LIAVLGWSLEKWFSRA"
BASE COUNT          618 a          942 c          800 g          625 t
ORIGIN      
        1 gacttgtcat gccggcgcag tccggcatcc agcggcggga ggggggggat ggataccggc
       61 ctgcgccggt atgacggagc agagagtcgt tatcgatgcg cagatcatcg ctgcacgtgt
      121 attttcgaag gagcacgaag atcacgaact tcggaataat atttttccga aaccttcgtg
      181 tccttcgtgc cttcgtggtg aaaactcttt aacatttgat cgagactctg ccatgcttag
      241 agttcgtgcc ttgcagttcg ggacttattc tcctacaaac cgcagatgaa gatcgtccga
      301 ctttacaccg gcgccgataa cgaatcgcac ttcgaagata tagaactcga tatgaatccc
      361 caaggcgtcg acttggttgc cgcattgcag ccggcccatg gcgtcatgtt ccgttcggcg
      421 ccaccgagcc atcggagcag ctatcactgc gtgccgagac ggcagtatgt catcactcta
      481 tccggccaag tcgagatcga gaccggcaac ggcaccatcc gccgcttcgg gccgggcgat
      541 gtcatgctcg ccgacgacac cacggggcgc ggccatatga cccgcgtcgt cggcaaccaa
      601 ccgcgccact acgttttcat cccgttgaaa taggatacct tcatcgaccc gcaaccatcg
      661 tcgctcggac cggatcgcct ctccgtcgcc atcgttccct gttcgaactt gatgccgtcc
      721 atgatggtgg cgacgctggg catcgccttg ccggagatac gccagacgtt ttcgctatcc
      781 gaactccaag ccggcagttt attctctgtc atgatgctca tcgccgccgt caccagcgcc
      841 atcgctggcc gcctggcgga tcgaatcggc cgcaaaaccg tgctgataac cggactcagc
      901 ttgctcgctg cgggatttgg ctgcgccggc atcaccgatc atccggtgtt gttcttcctg
      961 ctcctcgccg tcaccggcgt cggctatggc ttcacgccgc cgtcgcttta cgcgatcatg
     1021 tccgacctct tgcccaatcg gcgcggcttg ggcgcgagtc tcgtctctgt cacctatggt
     1081 attggcggtg ccatcggtgc ggtgttggct agccggatca ccgccgcttt cggttggcgc
     1141 gctgcgttta tcaccgtcgg tatcatcgcg gccgccgaca tgctgttgca gctttgttgg
     1201 attcgcgaca cccatcctag acgctcggca gcgcaatccg gctccttccg cgctgctctg
     1261 tcgttttcga ttttgattct cgcgctcgcg gaatttatcg gcggctcggt gttctgggct
     1321 tcggcggcgt ggactccgac actcctgcgc agcgccaagc atctcagtct tcaagagact
     1381 ggctggatca tgggtatctt gagcgtcgcc aatatggtcg gctcatttac tctagggaat
     1441 ctatccgaca tgttcggccg caagcgcgtc atcgcgctca gcgctttccc agcggccact
     1501 gcagctttcg tattgtttta ctggctgcaa tcgccgctgt cgctcgccat cggcatcgcc
     1561 gtcttcggcg tcgtcaaagc ttccgtgccc gcgttggtcg tcgccctcgc ccaggaagcc
     1621 gcaccgccgg gcaacgccgg caccgccagc ggcatcatca tggcgctcca ctacttcgca
     1681 ggcgtcgtcg cgccgttgat cgccgcgcaa atcatcgccg ccaccggcga catcgtattg
     1741 gcgatgatcc tgaccaccgc attgccgctg gttctctacg gctgcctgat ctgcgccgtt
     1801 cgcgagcgag cgcggtaaaa tcccattaac cacgaaggcc tagcgcggca cagccgcaac
     1861 cgaaactcgg aatatctctc gcaaagacgc aaaggccgca aaggtcggaa aataacgatg
     1921 agtaaattct tcaatttaat tcatctcttc cctccgaact tggcgagctt tgcctatgcg
     1981 agagtaaatc ccatgttcta gtattcccgt taccggaaaa tttgcgcaag ccgcgtaaat
     2041 ttcgaggcat agtagtacga agagcacgaa gttcggaata atattcttcc gaaaccttcg
     2101 tgtcctgcgt gccttcgtgg tgaaaaatat cgtctctttg aacctgcata ttcagcggag
     2161 ccaagaaaac agcgacacca ccaccgcccc gaccaacata ccggtgaccg cgctcttggt
     2221 tttgtaagcg atggcgatgg tcaccgccaa tgcgatggcg cggtacggcg cggcttgcat
     2281 gtcgaagcgc gcaccggaca taaatagtgt aatcgagatc aatccacaca acagcgcgta
     2341 ggacagatag cgcagcaagc ggtcccacag gtcaggaaag cttttgccga ccaaaaacat
     2401 ctgtggcaag gcgcgcagga ccaacgccga cagcccgaga atgaaaatca gctctaggcg
     2461 cgtgaaaacc atttttccaa actccatcct aagacagcga tcagcgccga cgtcgcgagc
     2521 cagccccagc caagattgaa cagcgcgccg gggatcgccg tgacgatgct cgccagacag
     2581 atcaacggca tggttttgcc tttcatctcc gccaccagca gcccggcgaa atagccgggc
     2641 aggataaatt tcaacgcctc ttcgaagccc ggcggaaaac tcaacccgac accataaccc
     2701 gcagcggtac cgaccaccca gaccgtgaat gccgtcgcgc cgatgccggc gaagaaaccg
     2761 aggttgccat aaccgtcagc gacggattta ccgccgctgg cttcccgctc tttttgaaag
     2821 tgcagataag gcacgatgaa actgctggcg ctcaccacat gggaagcgat catcagcggc
     2881 aagcgcttca cgccgcggaa aaacggcgcc aacgccatgc tcatgggcag gaagcgcaaa
     2941 ttcatcagca agccggcgat caacaccgtc gccgccgact tgcct
//
LOCUS       DATIRS010000605         2584 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1127663, whole genome shotgun sequence.
ACCESSION   DATIRS010000605 DATIRS010000000
VERSION     DATIRS010000605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2584
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1127663"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..345)
                     /locus_tag="VLM90_07655"
     CDS             complement(<1..345)
                     /locus_tag="VLM90_07655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12876.1"
                     /translation="MALLDFSATAYAGQAEPIKLTVGYSPISAATLPFFIAVEERLFQ
                     KHGLEVVPVFFGGSPLINAAMMAGEFPIGLTGGAGIISSQLAGSDLTVIGSYLQVLTI
                     DGMARPGIKSIED"
     gene            complement(381..1475)
                     /locus_tag="VLM90_07660"
     CDS             complement(381..1475)
                     /locus_tag="VLM90_07660"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12877.1"
                     /translation="MHGVFDADTHIAESEGMWSFIDKEMYPRRPVLARIPEDTWYHER
                     NAFWLIDGEIFPKPAGKASFSLITPSAQKKESGRGDIHLAVRELTDPSARLKDMDKIG
                     VEIQVIYPTLFLVYLTNEPQLDVALCRAYNRFVANACAKAADRLKWVVILPLRDIAAS
                     LEEMKWAKQQGAVGVFFRGMEGNLTLDNPQLHPIYALAQQLDLTICIHTGSGSRHLMQ
                     PFDVERNHTFAHNRVLPVVAFRDLVANRIPELFPKLRFGFIEAAASWVPYIWHVLRRS
                     ARPDFKTKNPQDLFREYRFWIACEADEELPHLLNYIGEDHIFIGSDYGHNDPSKEPDF
                     VRNMRAREDVPAAVIEKILCDNPRRLYGVN"
     gene            complement(1657..>2584)
                     /locus_tag="VLM90_07665"
     CDS             complement(1657..>2584)
                     /locus_tag="VLM90_07665"
                     /inference="COORDINATES: protein motif:HMM:NF024376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12878.1"
                     /translation="QNRFRAVSGGFGTAIHAVLWVGYEKKIFQKYGLDMEYLAIENGT
                     VSMQTLLANETQAAFTTGALAVTANLQGGDSTIIAGGINFIPNKLVTRPDIKRPEDLK
                     GKRIAISRFGSASDYATQLALEKLNVNPKDVTIIQAGGNSTRFSAIVGGSIHATLLSE
                     PLTTMALRDHKMNSLIDLAESGVPFPQNAFLVRRSYLEAYRPRVVNFMKGVIEGYYTL
                     KNDKPLAIQMIKKYIRVSDEDAAIGYDYYLAKYGDGVMVMPERKGIEFILGQVAKENP
                     KAKGQTPESLRLLDSSVLDEIRKSGFIDKFKK"
BASE COUNT          538 a          753 c          707 g          586 t
ORIGIN      
        1 atcctcgatg gatttgatgc ctggtctggc cataccgtcg atcgtgagca cctgtaagta
       61 gctaccgatg accgtgagat cgctaccagc gagctgactg gagataatcc ccgcgccgcc
      121 ggtcagacca atgggaaact cccccgccat catcgccgca ttgatcaacg gcgagccgcc
      181 gaaaaatacc ggcacgacct ccaggccatg tttttgaaac aggcgctctt caacggcgat
      241 gaaaaacggc agtgtcgcgg ccgagatcgg agagtagcca accgtgagct tgatcggttc
      301 cgcttgcccc gcgtacgcgg tcgcggagaa atccagcagc gccacgaggc aagctaatct
      361 catgagccgg cgcataacca tcaatttaca ccgtagagtc gccgcggatt gtcgcataat
      421 attttttcta taaccgctgc cggaacatcc tctcgtgcac gcatgttcct gacgaaatcc
      481 ggctccttgg acggatcgtt gtggccgtag tcggagccga tgaagatatg atcttcgccg
      541 atgtagttga gtagatgcgg cagttcctcg tcggcttcgc aggcgatcca gaagcggtac
      601 tcgcggaaca gatcctgggg attcttggtc ttgaaatccg gccgcgccga ccggcgcagc
      661 acatgccaga tatagggcac ccagctcgcc gccgcttcga tgaaaccgaa gcgaagcttg
      721 ggaaacagtt cgggaatccg gttggccacc agatcgcgaa acgcgaccac cggcaggact
      781 cgattgtggg cgaaggtgtg attgcgctcg acatcgaagg gctgcatcaa gtgccggctg
      841 cccgagccgg tatgaatgca aatggtcaga tcgagttgct gcgccaacgc atagatgggg
      901 tgaagctgtg gattatcgag ggtcagattg ccttccatgc cgcgaaaaaa cacgcccacc
      961 gcgccctgct gcttggccca cttcatctct tccagcgacg cagcgatatc gcgtagcggc
     1021 aggattacca cccacttgag tcgatctgcc gcttttgcgc aggcgttggc gacaaagcga
     1081 ttgtaagcgc ggcaaagcgc cacatccaac tgcggttcat tcgtgagata gaccagaaac
     1141 aaggtcgggt aaatcacctg gatctcgacg ccgatcttat ccatgtcttt caaccgcgcc
     1201 gaaggatcgg tcaactcgcg cacggccaga tggatatcgc cgcggccgga ctctttcttc
     1261 tgcgccgacg gcgttattaa actgaagctc gccttgccgg cgggcttggg gaaaatttcg
     1321 ccatcgatca gccagaaggc attgcgctca tggtaccaag tatcctccgg gatgcgcgcc
     1381 aacaccggcc ggcgcggata catttctttg tcgataaaac tccacatccc ctcggactcg
     1441 gcgatatggg tgtcggcgtc gaaaactccg tgcatcttta gttctcctca aacattcagt
     1501 tccaacagtt ttcaattgtt ccagtggttc cagtcgttca gaggacggac acgaatcagc
     1561 tcttaaactt tgcgaccttt gcgttctctg aggccaatcc ctccgaatcc gccttttcct
     1621 ctctgcgcac tccgcgtctc cgcggtgtat ccgttcctac ttcttaaatt tatcgatgaa
     1681 accgctcttg cggatttcat cgagcacgct gctgtccagc aaacgcaggc tttcgggcgt
     1741 ctgccctttg gctttcggat tttctttcgc cacctggccg aggatgaact cgataccttt
     1801 gcgctctggc atgaccatga cgccgtcgcc gtacttggca agatagtaat cgtagccgat
     1861 ggcggcgtct tcgtcgctga cgcggatgta tttcttgatc atttgtatcg ccagcggttt
     1921 gtcatttttc aatgtgtaat acccttcgat cacgcccttc atgaaattga ccacccgagg
     1981 gcggtaagct tccaagtagc tgcgccggac caggaaggca ttttgcggga acggcacgcc
     2041 gctttcggcg agatcgatca gtgagttcat cttatgatcg cgcagcgcca tggtcgtcag
     2101 tggttcggac aatagcgtcg cgtgaatgct cccgccgacg atagccgaga agcgcgtcga
     2161 attgccgccc gcttggatga tcgtcacatc cttggggttg acgttgagtt tttccaaggc
     2221 caactgggtg gcgtaatcgg acgccgagcc gaatcggctg atggcgatgc gtttgccctt
     2281 caagtcctca ggccgtttga tgtccggccg ggtcaccaac ttgttgggga taaaattgat
     2341 cccgccggca atgatcgtcg agtcgccgcc ctgcaaatta gcggtcaccg ccaaggcgcc
     2401 ggtggtaaac gccgcctgag tttcattggc caacaacgtc tgcatcgaca ccgtgccgtt
     2461 ctcgatggcg agatattcca tgtcgagtcc gtatttttgg aatatctttt tctcatagcc
     2521 gacccacagc accgcgtgga tcgccgtgcc aaaaccaccg ctgacggcgc ggaagcgatt
     2581 ctgc
//
LOCUS       DATIRS010000606         1914 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_241841, whole genome shotgun sequence.
ACCESSION   DATIRS010000606 DATIRS010000000
VERSION     DATIRS010000606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1914)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1914)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1914
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_241841"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..797
                     /locus_tag="VLM90_07670"
     CDS             <1..797
                     /locus_tag="VLM90_07670"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ12879.1"
                     /translation="LLQPSAGRAEIDGLDVVKQTEEVKKRIGYMSQRFSLYEDLTVEE
                     KIDFYAAIYGLPPTELDLRRNSVIDLVGLQSRMKQLAATLSGGYKQRLALACSLLHRP
                     KIVFLDEPTAGIDPVARREIWDLLFRLASEGTTLFVTTHYMDEAERCSQVAYIYLSKL
                     IAHGRPQELKRLPEITPDGSSWFEISSSDATRLLPVVREHPHVLDATIFGEAIHALGR
                     RGTDAATLQDYLRQKGFPTAQCRVVPPSLEDVFVTLTRQRRNHSEG"
     gene            800..1903
                     /locus_tag="VLM90_07675"
     CDS             800..1903
                     /locus_tag="VLM90_07675"
                     /inference="COORDINATES: protein motif:HMM:NF024091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSQ12880.1"
                     /translation="MFRGLWAILKKEIIHIKRDPATRFVLAIPLIELLLFGYAIDTDV
                     KHVPTVVLDFNQDAESRLLVNEFENTRYFKLVGDVHSDQELQAAIVSGRAKVGIKIPP
                     DYSANLLNGRQGQVQVIIDGSDSTTALQILNASQQLGFLKSLEREGVSPAMFSVDVRP
                     RLLFNPNLQSANFFVPGLIGIVLQLVTVFLTAFAIVRERERGTLEQLLVTPVSKGGLI
                     LGKLLPYTVIGFAQTVLVLLVMVFLFGVPINGSVTLLLFLSLFFLVSALGIGIVISTF
                     ARNQGEAMQLSLMSMLPAFLLSGFVFPRDSMPLIIYIISLFIPATYYLEILRGIILRG
                     AGIAALWDEALVLAAFGVFFMVVSALRFKKHLG"
BASE COUNT          366 a          550 c          553 g          445 t
ORIGIN      
        1 gattgttgca gccttcggcc ggccgggccg agattgacgg cctcgatgtg gtgaagcaaa
       61 ccgaggaagt caaaaaacgc atcggctata tgtcccagcg cttcagcctc tacgaagatc
      121 tgacggtaga agagaaaatt gatttctacg cggctattta tggcctcccg cccaccgaat
      181 tagatctcag gcgaaactcg gtcatcgatc tcgtgggatt gcaaagtcgc atgaagcagc
      241 tggcggcgac actttccggc ggttacaagc agcggctggc gctggcatgt tcgcttttgc
      301 atcggccaaa aatcgttttt ctcgacgaac cgaccgcggg gatcgatccg gtggcgcggc
      361 gagagatttg ggacctgctc tttcgccttg ccagtgaggg cacgacgctg ttcgtcacga
      421 cccactatat ggacgaggcg gagcgctgtt cccaggtggc ctatatttat ctttccaaat
      481 tgattgccca cggccggccg caggaactga agcgattgcc cgaaatcacc cccgacggat
      541 cgagctggtt tgaaatcagc agcagcgacg caacccgatt actgccggtg gtgcgcgagc
      601 acccacacgt gctcgacgcg acgatcttcg gcgaggcgat tcacgccctc gggcgccggg
      661 gtactgacgc cgcaacgctg caagattatt tacgccaaaa aggttttccg acggcccaat
      721 gccgggtcgt gccgccgtcg ttggaagatg ttttcgtcac gctgacgcgg cagcgccgca
      781 accactcgga aggataacca tgtttcgcgg gctctgggcc atactcaaaa aagagatcat
      841 ccatatcaag cgcgatccgg cgacgcgttt cgtcttggcc attccgttga tcgagttgct
      901 gctcttcggc tacgccatcg acacggatgt caagcatgtg ccgaccgtgg tgctcgactt
      961 caatcaggac gcggagagcc gtctactggt caacgagttc gagaataccc gctattttaa
     1021 acttgttggc gatgtccatt cggatcaaga gttgcaggcg gcgatcgtca gcggccgggc
     1081 caaggtgggg atcaaaatcc cgccggacta ctcggccaat ctgctcaacg gccgccaagg
     1141 tcaagtgcag gtgatcatcg acggctccga ttcgacgacg gcgctgcaaa ttcttaacgc
     1201 aagccagcag ctcggtttct tgaaatcact ggaaagggag ggcgtctcgc cggcgatgtt
     1261 ttcggtcgac gtgcgcccac ggctgctgtt caatcccaat ctgcaaagcg ccaatttctt
     1321 cgtgccgggc ctgatcggga tcgtgctcca attagtcacg gtgtttctca ccgctttcgc
     1381 catcgtgcgc gagcgcgaac ggggcacgct ggagcaactg ctggtgacac ccgtgtcgaa
     1441 gggcggattg atcctcggca aacttctgcc ctacacggtg atcggtttcg ctcaaaccgt
     1501 gctggtgttg ttggtgatgg ttttcctgtt cggggtgccg atcaacggct cggtgacgct
     1561 gctgctgttt ttatcgctct tttttctcgt gtccgctctc ggcatcggca tcgtgatttc
     1621 caccttcgcc cgcaaccagg gcgaagcgat gcagttgtcc ttgatgtcca tgttgccggc
     1681 gttcttactg tcgggatttg tctttccgcg ggattccatg ccgctgatca tctacattat
     1741 cagcctgttt attccggcga cctactattt agaaattctg cgcggaatca ttctgcgcgg
     1801 cgccggcatc gcggcgctct gggacgaggc cttggtgctc gccgccttcg gtgttttctt
     1861 tatggtggtc agcgcgctcc gcttcaagaa acacttgggc tagaaaccgc cggc
//
LOCUS       DATIRS010000607         1936 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1815471, whole genome shotgun sequence.
ACCESSION   DATIRS010000607 DATIRS010000000
VERSION     DATIRS010000607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1936)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1936)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1936
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1815471"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..331
                     /locus_tag="VLM90_07680"
     CDS             <1..331
                     /locus_tag="VLM90_07680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12881.1"
                     /translation="PRLPDTPTLAELMDELKTSVAARQLVPVVLASGDFGRPIIAPPG
                     VAPDKVKILRDAFMNTMNDPELLAEAKKRSLSITPTRGEELEMSAKSVVVQSPEMLQR
                     LKTLMNE"
     gene            662..1888
                     /locus_tag="VLM90_07685"
     CDS             662..1888
                     /locus_tag="VLM90_07685"
                     /inference="COORDINATES: protein motif:HMM:NF004834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSQ12882.1"
                     /translation="MATEKISARCCIAGGGPAGMMLGYLLARAGVEVVVLEKHSDFLR
                     DFRGDTIHPSTLEVMHELGLLDEFLKLPHQEVDQLNAQVGELRLTIADFRHLPTRCGF
                     IALMPQWDFLNFVAEKAARYSNFVLIMDTEVNGLIEESGRVIGVRANTPKSALEVRAH
                     LVVGADGRSSIVRQRAGLQVKEYGAPMDVLWFRLRRTAEDPVATMGRFDSGRIFIALN
                     RGDYWQCGYVIAKGQFDELRRQEFATFRAAIVQLAPYAGDSVHELRGWDDVKLLTVRV
                     DRLIDWFRPGLLCIGDAAHAMSPVGGVGINLAIQDAVAAANVLFQPLRQGHLAIDHLR
                     QLQQRREWPTRVTQGLQVAVQRRIIARVLSGTGPLKPPFALRLLAKVPFLRRIPARLV
                     GIGIRPEHVSPELLRS"
BASE COUNT          381 a          575 c          571 g          409 t
ORIGIN      
        1 cccgcgctta ccggatactc cgacgcttgc cgagctcatg gacgagctca agacctcggt
       61 cgccgcgcgc caattggtgc cggtggtctt ggcgagcggc gacttcggcc ggcccattat
      121 cgcgcctccc ggagtagcgc cggacaaggt caaaatttta cgcgacgcct ttatgaacac
      181 catgaatgat cctgaactcc tggccgaggc gaaaaaaagg agcttgagca ttacgccgac
      241 gcgcggtgag gagcttgaga tgtcggcaaa gagcgtcgtc gtgcaatcgc ccgagatgct
      301 gcaacgattg aaaaccctga tgaatgagta agcggaccgg caacgcgatc ttcaagcgta
      361 attctcgctg agcgcaacaa ttagcgatgg ccactatgat caactttgtt gaccgttctc
      421 agccggctca aaagcgaaat tagtcaagtt gtccgcagag ctttgacaaa tagcaaaaag
      481 cggccttgac ccctgtctga cctttgaccc acgcccacct tcgcctcaca ttcattggat
      541 ggctcgcaac acatcccgtt attggctgct cccttagtta gagtgtacga gtcccgattt
      601 cggagcaatt ttcttgtccc gtcattcttg atacggcggg aagcgctcgc taacttaaac
      661 catggcgact gagaaaattt ccgcgcgctg ctgcatcgcc ggcggcggcc cggccggcat
      721 gatgctgggg tatctgctgg cgcgcgccgg cgtcgaagtc gtagtgctgg aaaagcacag
      781 cgatttcctg cgcgattttc gcggcgatac cattcatccg tcgaccctcg aggtgatgca
      841 cgagctggga ttgctcgatg agtttctcaa gctgccgcat caggaggtcg accagctcaa
      901 cgcgcaagtt ggcgagttgc ggctgaccat cgcggatttc cgccacctgc cgacccgctg
      961 cggctttatc gccctcatgc cgcagtggga ttttctcaac ttcgtcgccg aaaaagccgc
     1021 gcgctattcc aacttcgttt tgatcatgga cacagaggta aacggcctta tcgaagaatc
     1081 ggggcgtgtg atcggggtgc gcgcgaatac cccaaaaagc gcgttggaag tccgggccca
     1141 tctggtcgtc ggcgccgacg gccggagctc gatcgtgcgc caacgcgccg gtttgcaagt
     1201 gaaggaatac ggcgcgccga tggacgttct ctggtttcgg ctccgtcgaa ccgccgaaga
     1261 tcccgtggcg accatgggca ggttcgatag cggcaggatt tttatcgcgc tcaatcgcgg
     1321 cgactattgg cagtgcggct acgtcattgc caagggccag tttgacgagc tgcgccggca
     1381 agaatttgcc acgtttcgcg cggcgatcgt gcagcttgcg ccttacgccg gcgacagcgt
     1441 gcatgagctg cgcggctggg acgatgtaaa gcttttaact gttcgtgtgg accgattgat
     1501 cgattggttt cggccgggtc tgttgtgcat tggcgacgcc gctcacgcca tgtctccggt
     1561 cggcggcgtc ggcatcaatc tagcgatcca agatgccgtg gcggcagcca atgttctttt
     1621 ccaaccgctg cggcaaggac acctcgccat cgatcacctg cgccagctcc agcagcgccg
     1681 cgagtggccc acgcgcgtga cccaagggtt gcaggtcgcc gtccagcgcc ggatcatcgc
     1741 gcgggtgttg agcggcaccg gaccgctcaa accgccgttc gcgcttcgct tgctagctaa
     1801 agttccattt ctccggcgaa tcccggctcg gctcgtcggc atcggcatcc gcccggaaca
     1861 tgtgagtcca gagctcttac gttcataaaa atcgaaccac agaggcgcgt gacaggggaa
     1921 ttgtgcatga tcttgc
//
LOCUS       DATIRS010000608         3639 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_832324, whole genome shotgun sequence.
ACCESSION   DATIRS010000608 DATIRS010000000
VERSION     DATIRS010000608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3639
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_832324"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(14..1222)
                     /locus_tag="VLM90_07690"
     CDS             complement(14..1222)
                     /locus_tag="VLM90_07690"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSQ12883.1"
                     /translation="MTKNFPSKNTAGEPLGFSTLAVHGGEPRPKLGNSLATPIVQTAT
                     YTFADTQELHDHFQRKIEREEYGRYGNPTQRIAEQKLASLEGAADCLLFSSGMAAVTT
                     ALYAVLSHNSHVVVTDDSYRRTRQFLTQTLHRYGIEVSVVPAGDYQAIEEAIRPTTRL
                     LVSESPTNPYNRIVDMERFADIGKRHRVKTLIDATFATPFNQRPLEFGIDLVLHSATK
                     YLGGHNDLLAGAVLGSEELVDGIRSLQHVTGAIIDPLAAYLLVRGLKTFGLRIERQNA
                     NAQGLAEFLAGHAKIAAVHYAGLTSHPEHAIARRQMRGFGGVVSFEFKGDLDATSRVV
                     DGCRIPQIAPSLGGVESLIEQPALMSFYELSTEERLMVGIKDNLIRYSVGIEDAADLI
                     ADLAAALERA"
     gene            complement(1242..2588)
                     /gene="thrC"
                     /locus_tag="VLM90_07695"
     CDS             complement(1242..2588)
                     /gene="thrC"
                     /locus_tag="VLM90_07695"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HSQ12884.1"
                     /translation="MNYNAWFQCINGCPGQYNLLEIIYRCPSCGDLLEVRHDMEALRT
                     RAAAGWIKLFDDRVGQNVYPYGSGVWAKKEWVIPFINNENIVSTCEGNTNLFWANRYG
                     KQLHLEDLWVKQCGNSHTGSFKDLGMTVLVSVVQQMIANGEPIDAVACASTGDTSAAL
                     AAYGAAAGIPTVVFLPRDKVSPAQLVQPLANGALVLSLDTDFDGCMAAVQEVTQQKRL
                     YLANSMNSLRIEGQKTIALEIVQQFDWEVPDWVVLPGGNLGNVSALGKGFLMMHDLGL
                     ISKLPRICVAQAENANPLYLSYLKNFEHFEPVTAKKTLASAIQIGNPVSIRKATATLQ
                     RFDGVVEQASEQELAEEVARADRTGMFNCPHTGVALAALRKLVNKKIIHGHERVVVIS
                     TAHGLKFADQKIAYHSGALPGIKASQANQPVQVSADPKKISDAISRYVERVRLLDS"
     gene            2773..3204
                     /locus_tag="VLM90_07700"
     CDS             2773..3204
                     /locus_tag="VLM90_07700"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSQ12885.1"
                     /translation="MAKSKHIAIATQDPEKTAQFYKEVFGLKEIAKINSPGATGFHLT
                     DGDINFAVLKFKNDQTAGVPQGKAYSGLHHIGFEVDSIEAVDKKLADAGAPIRDDINQ
                     ALGLGRNLASHVNAEVKYSAPDGVIIDISETGWAGTAKHPR"
     gene            complement(3396..3614)
                     /locus_tag="VLM90_07705"
     CDS             complement(3396..3614)
                     /locus_tag="VLM90_07705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12886.1"
                     /translation="MANLYHNDRLIVAYASMNQSTKDWSPGAEITWKRDGQRFSHSVG
                     GLTDRFKSSDDAERFVINLAKAWIDSNP"
BASE COUNT          798 a         1066 c         1010 g          765 t
ORIGIN      
        1 atttacacga cacttacgcc ctctccaacg ccgccgctag atccgcgatc aaatccgccg
       61 cgtcttcgat accgacggaa tagcggatca gattgtcttt gataccgacc atcaagcgct
      121 cttccgtgct gagctcgtaa aagctcatca gcgccggctg ctcgatcaag ctctcgacac
      181 cgcctaggga cggggcgatt tgcgggatac ggcagccgtc gacgacccgt gaagtcgcgt
      241 cgagatcacc tttgaattcg aaggacacca cgccgccgaa gccgcgcatt tgccggcgcg
      301 cgatggcatg ctcgggatgg ctcgtcaagc cggcgtaatg caccgcggcg atttttgcat
      361 ggccggcgag aaattccgct aaaccttggg cattggcatt ttgccgctcg atgcgcagac
      421 caaaggtttt caaaccgcgg acgagtaaat aggccgccaa cggatcgatg atcgcgccgg
      481 tcacatgctg caaagagcga atgccgtcga ctaattcttc ggagccgagc acggcaccgg
      541 cgagcagatc gttgtgcccg cccaaatatt tggtcgctga gtgcagcacc agatcgatgc
      601 cgaactcgag cggtcgctgg ttgaacggcg tcgcaaaagt cgcatcgatc aaagttttta
      661 cccggtggcg cttgccgatg tcggcgaagc gttccatgtc gacaatgcgg ttgtagggat
      721 tggtcggcga ctcgctgacc aaaagccggg tcgtcggccg gatcgcttct tcgatcgctt
      781 ggtagtcgcc tgccggcacc accgagactt cgataccgta gcgatgcaaa gtctgggtta
      841 gaaactgccg ggtgcggcgg taagaatcat cggtgacgac gacgtgggaa ttatgcgata
      901 gcaccgcata cagcgcggtg gtcaccgccg ccatgccgct ggaaaacagc aaacagtctg
      961 ccgcgccttc caatgacgcc agtttttgct cggcgatgcg ttgggttgga ttgccgtagc
     1021 ggccatactc ttcgcgctcg atcttgcgct ggaagtggtc gtgcagttcc tgggtatcgg
     1081 cgaaagtgta ggtcgcggtt tgcacgatcg gcgtggctaa cgaattgccg agcttgggtc
     1141 gcggctcgcc gccatgcacc gccaaggtgc taaatcccag cggttcgccc gctgtattct
     1201 tactgggaaa attcttggtc atgttaactc gcctgtaaat attagctgtc taacaagcgc
     1261 acccgttcga cgtagcgcga gatcgcgtcg ctgatcttct ttggatcggc gctcacctgc
     1321 accggctggt tcgcctggga tgctttgatt cccggcaacg ctcccgaatg gtaagcgatc
     1381 ttttgatcgg cgaacttgag tccatgggcg gtcgagatca ccaccacgcg ctcatggccg
     1441 tggatgatct tcttattaac caacttgcgc aacgccgcca acgccacgcc ggtgtgcggg
     1501 caattgaaca tccccgtgcg gtcagcgcgg gcgacctctt cggccaactc ctgctccgat
     1561 gcttgctcga ccacaccgtc gaagcgttgc agcgtcgcag tcgccttgcg gatgctcacc
     1621 ggattgccga tttgaatcgc gctcgccaaa gtcttcttcg ccgtcaccgg ttcaaagtgt
     1681 tcaaaatttt tcaggtacga cagatagagc gggttggcgt tctccgcctg ggcgacacag
     1741 atgcgcggca gcttcgagat caagccgaga tcgtgcatca tcaagaaacc cttgccgagg
     1801 gcgctgacgt tgcccaagtt gccgcctggc aggactaccc aatccggcac ttcccaatcg
     1861 aactgttgga caatttccaa agcaatggtc ttctgccctt cgatgcgcag gctgttcatt
     1921 gagttagcca gatacaagcg cttttgctgg gtgacttcct gcaccgccgc catgcaaccg
     1981 tcgaaatcgg tatcgaggga gagcaccaat gcgccgttgg caagcggctg caccagctgc
     2041 gccggcgaga ctttatcacg tggcaaaaac accacggtgg gaatgccggc agcggcgccg
     2101 taggctgcca gcgccgccga ggtgtcgccg gtggacgcgc aagccaccgc gtcgatcggt
     2161 tcgccattag cgatcatctg ctgaaccacc gacaccagca ccgtcatgcc gagatctttg
     2221 aacgacccgg tatgcgaatt gccgcattgc ttgacccaaa gatcttccag gtgcagttgc
     2281 ttgccgtagc ggttggccca gaacagattg gtgttaccct cgcaggtcga aacgatgttc
     2341 tcattgttaa tgaacgggat cacccattcc tttttcgccc acacgccgga gccgtaggga
     2401 tagacgtttt ggccgacgcg gtcgtcgaac agtttgatcc aacccgccgc cgcccgcgtg
     2461 cgcaatgcct ccatgtcatg gcgcacttca agcaagtcgc cgcagctagg acaccgatag
     2521 attatttcca atagattata ctgtccggga cagccgttta tgcattggaa ccaggcgtta
     2581 taattcatcg cgtcatacct tccgcgcctt cgcgctgcca gagtaggcta acaattttcc
     2641 cgggatccct acttagatct cggcttatat tgcctgcttt gccagggttt ttccaacccg
     2701 ctgcaaccca acattgcatg ggcaggcgtg ctattgtaaa agccaagtca gccgataggc
     2761 aatggaggtt ccatggcgaa gagcaaacat atcgcaatcg cgacccaaga tccggaaaag
     2821 acagcgcagt tctacaaaga agtattcggt ctcaaagaaa tcgccaagat caacagccca
     2881 ggcgctactg gttttcacct taccgacggt gacatcaact tcgcggtgct gaagttcaaa
     2941 aacgaccaga ccgccggcgt gccgcaagga aaggcgtaca gcggcctgca ccatatcggt
     3001 ttcgaggtcg acagcatcga agcggtcgat aagaaactcg cggacgccgg cgcgccgatc
     3061 cgcgacgaca tcaatcaagc gctagggctg ggccgcaacc tggcgtccca tgtcaacgcc
     3121 gaggtcaaat acagcgcccc cgacggtgtc atcatcgaca tctccgaaac cggatgggct
     3181 ggcacggcta agcatccgag ataagccggc aacgaattca gtcagccaaa aacgcggata
     3241 ttggaactaa aatagccttc atacggaaag aagtcgattt acagtcgact ctgattcccg
     3301 tcatgttcgc gaacgcgggc atcgagattt tctttccccc aactaagcaa caagaaactg
     3361 agaaaccagg agtgacgacg atccaccgga aggttctacg gatttgaatc gatccaagcc
     3421 ttggccaggt tgatgacaaa gcgctcggcg tcatcgctcg acttgaaacg gtcggtcaaa
     3481 ccgccgacgg agtggctaaa gcgctggcca tcgcgcttcc aggtaatctc agcgccggga
     3541 ctccaatcct tggtgctctg attcatcgac gcgtaggcta cgatcaaccg gtcgttgtga
     3601 tataggttgg ccatggtcgg ctatatctca tttcagaga
//
LOCUS       DATIRS010000609         2518 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1717583, whole genome shotgun sequence.
ACCESSION   DATIRS010000609 DATIRS010000000
VERSION     DATIRS010000609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2518
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1717583"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(173..1039)
                     /gene="atpG"
                     /locus_tag="VLM90_07710"
     CDS             complement(173..1039)
                     /gene="atpG"
                     /locus_tag="VLM90_07710"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit gamma"
                     /protein_id="HSQ12887.1"
                     /translation="MATLKTIRKRISSVKNTQQITKAMKMVSAAKLRRAQEGAVQARP
                     YAEKMTELLKNVSARVSSEAHPLMTSREEKKVQLVLFTSDRGLCGGYNTNMIRAAEAF
                     IRQHGDERQIQLTFVGRKGAEHFRRRGAETSDRYVDILYKAPDELASEIAEKLISRFV
                     GGEVDAVYIVYSRFRSALSQVPTLEKLLPVTLAETDELQAQQQTEYLYEPGVEQLLAS
                     LLPRITGVAVQRALLEATASEHGARMTAMESASGNAAKMIGSLTLQMNRARQASITRE
                     LLEIVGTAEALK"
     gene            complement(1111..>2518)
                     /gene="atpA"
                     /locus_tag="VLM90_07715"
     CDS             complement(1111..>2518)
                     /gene="atpA"
                     /locus_tag="VLM90_07715"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HSQ12888.1"
                     /translation="GDGIARIYGLDKVAAGELLEFPHDIYGIALNLEEDNVGAALFGE
                     THMIKEGDTVKRTGRIAEVPVGKEMIGRVVDALGTPIDVRGPIESKERRRIELKAPGI
                     VARQPVKEPLQTGLKAIDGMIPIGRGQRELIIGDRQTGKTAVAIDAIINQKGGDVICI
                     YVAIGQKRSTVAQVVDRLREAGAMDYSIVVAATASESAPLQFIAPYSGCTMGEYFRDN
                     GGHALVIYDDLSKHAVAYRQLSLLLRRPPGREAYPGDVFYLHSRLLERAAKMSADRGG
                     GSLTALPIIETQAGDVSAYIPTNVISITDGQIFLESDLFYSGVRPAINVGISVSRVGG
                     NAQIKAMKQVAGTLRLELAQYREMAAFAQFGSDLDAATQKQLNRGARLVELLKQGQYQ
                     PLAVEQQVVIIYAGTNGYVDDLPVAALKRYEQELFAFISSRHPDVFSDILQKRELDGD
                     LRGKLNKVLAEFKGVFKA"
BASE COUNT          523 a          736 c          710 g          549 t
ORIGIN      
        1 cagcgcgcca tcggcaaact cgacatcgac gaccgcaccc aaaacttggg tgagtttacc
       61 catactcatt ttattaaccc ctccgaaatt cgtgttcgtg ctcgtgtttc gtgctcgtca
      121 atccatgttc caagtatccc cgaacacgat cacgagcgac gatcacgttt atttacttca
      181 aggcttccgc cgtgccgacg atctccaaca actcacgagt gatcgaagcc tggcgggcgc
      241 ggttcatttg caacgttagc gagccgatca tcttggcggc gttgccgctt gccgactcca
      301 tggcggtcat gcgcgcgcca tgttcgctcg ccgtcgcttc caacaacgcc cgctgcaccg
      361 ccacgccagt gatccgcggc aacaaactcg ccagcagctg ctcgacaccg ggctcgtaca
      421 aatactcggt ttgctgctgt gcctggagct catcggtctc ggccaaggtc accggcaaga
      481 gtttttccag cgtcggcact tgcgacaaag ccgagcggaa gcggctatag acgatgtaaa
      541 ctgcgtccac ttcgccgccg acaaatcggc taatgagttt ttcggcgatt tcgctggcga
      601 gttcgtcggg cgctttgtag agaatgtcga cataacgatc ggaagtctcg gcgccgcgac
      661 ggcgaaaatg ttcggctccc ttgcgcccga caaaagtcaa ttgaatttgc cgctcgtcgc
      721 catgttgacg gatgaaggct tcagcggcgc ggatcatatt ggtattgtag ccgccgcaaa
      781 gaccgcgatc ggaggtgaaa agcaccagct gaactttttt ctcctcgcgg gaggtcatca
      841 aaggatgggc ttcactggaa acccgcgccg aaacgttttt caacaactcg gtcatcttct
      901 cggcataggg gcgcgcttgt accgcccctt cctgggcacg gcgcagcttg gccgccgaga
      961 ccattttcat ggccttggtg atctgctggg tattcttaac cgagctgatc cgtttacgta
     1021 tggttttaag tgttgccatt atgatcgacg tttcgggttc cgagtttagg gtatcgggtt
     1081 aactcgaaac ctcaaacccg aaactcgtaa ctaagcttta aacacgcctt tgaattctgc
     1141 caggaccttg ttgagcttgc cgcgcaggtc gccgtccaac tcgcgcttct ggagaatatc
     1201 ggagaagaca tcgggatggc gcgagctgat aaacgcgaat agctcctgtt catagcgttt
     1261 gagggccgcg accggcaggt cgtcaacata gccattggtg ccggcgtaga taataaccac
     1321 ctgctgttcg accgcaagcg gctgatattg gccttgttta agcaattcga ccaagcgcgc
     1381 gccgcgattc aattgtttct gcgtcgccgc atccaaatcg gaaccgaact gagcaaaggc
     1441 ggccatttca cgatactggg ccagttccaa acggagcgtg ccggcgactt gcttcatcgc
     1501 cttgatttgc gcgttcccac cgacccggga gaccgaaatg ccgacgttga tcgccggccg
     1561 aacgcccgag taaaaaagat cgctttccaa aaagatctgg ccgtcggtga tcgaaataac
     1621 gttggtcgga atataggccg aaacgtcgcc tgcttgagtc tcgatgatcg gcaaggcggt
     1681 cagtgaaccg ccgccacggt cggcgctcat cttggcggcg cgctcgagca aacgggaatg
     1741 cagatagaaa acgtcacccg gatacgcttc acggccgggc ggacggcgca acagcaagga
     1801 caattggcgg taagcgaccg catgcttcga cagatcgtcg taaataacta aggcatggcc
     1861 gccattgtcg cggaagtact cgcccatggt gcagccggag taaggcgcga tgaactgtag
     1921 cggggccgat tccgacgctg tcgccgcaac gacgatcgaa tagtccatcg cgccggcctc
     1981 tcgaagccga tcgacaactt gggcaaccgt ggaacgcttc tggccgatgg cgacataaat
     2041 acaaatgacg tcgccgcctt tctgattgat tatcgcgtcg atggcgacgg cggttttgcc
     2101 ggtctggcga tcgccgatga tcagttcgcg ctggccgcgg ccgatgggaa tcatgccgtc
     2161 gatcgccttc aagccggttt gcagcggttc tttcaccggc tggcgggcaa cgatgccagg
     2221 ggctttcaat tcgatgcgtc ggcgctcttt ggattcgatc ggaccacgca catcgatcgg
     2281 cgtcccgagt gcgtcgacca cgcggccgat catttcctta ccgaccggaa cctcggcaat
     2341 acggccggtc cgtttgaccg tgtcgccctc tttgatcata tgggtttcgc cgaacagcgc
     2401 ggcgccgacg ttgtcttctt cgaggttgag cgcgatgccg taaatatcgt ggggaaactc
     2461 tagcagctcg ccggccgcga ctttatcgag accgtaaatg cgcgcgatac cgtcgccg
//
LOCUS       DATIRS010000610         2041 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1618937, whole genome shotgun sequence.
ACCESSION   DATIRS010000610 DATIRS010000000
VERSION     DATIRS010000610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2041
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1618937"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..368
                     /locus_tag="VLM90_07720"
     CDS             <1..368
                     /locus_tag="VLM90_07720"
                     /inference="COORDINATES: protein motif:HMM:NF016408.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HSQ12889.1"
                     /translation="GAYLGAGTKINGKLHFEGQVTIDGEVEGEIVAQAHIIVGQQATI
                     KGKVTAQSILVQGKVMADVVTEKKLEIQPPGTVMGDVTTQSLVIGDGAVLEGHISMRK
                     NEARAIPLRQEQKKEGSVS"
     gene            complement(372..1118)
                     /locus_tag="VLM90_07725"
     CDS             complement(372..1118)
                     /locus_tag="VLM90_07725"
                     /inference="COORDINATES: protein motif:HMM:NF024774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine deaminase C-terminal domain-containing
                     protein"
                     /protein_id="HSQ12890.1"
                     /translation="MLDDLDPCHVREVRVGGKRVAGNGVSEFHGEAMALPQDLLCSLR
                     VGLPISHAVFKIAAPRANPKVRVMELVNQTITAQRIVEFNAANGFVEASLYHDILKVA
                     MFDRHGKSPQVAFGFLNGFGAKVGAVGLTTNLDENTLMIVGSDDADMARCANVLLEVG
                     GGMAIVDGGQVVEKMEFPVGGIFSLLPWQEIGTGMRRIQGCLKEMGSSLDKPIFALNF
                     LPFVTLPALRITARGLVNAKERRIVPLFAD"
     gene            complement(1221..>2041)
                     /locus_tag="VLM90_07730"
     CDS             complement(1221..>2041)
                     /locus_tag="VLM90_07730"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12891.1"
                     /translation="YSREILEGVEIAVLDGRICYVGSSAKHTRGEHTEVLDASGCYIS
                     PGFIDGHTHIGHYARPFENLQSFLPHGTTSLVASCDELSSVLGLRGLKLFLDEVEKHP
                     LRVYTLVSMAAPQDPMLCSTAEFTNEEIAAALDDARVLGMGEIVSWLRLTQCDDELLA
                     RLELASRRGQIVHGHTAGARDQKLCAVAATGISSCHEPIRFEDALERLRLGYWTMLRE
                     GSLRQDLATTLPELITSGVSLQRLILVTDSMTPDDVAEHGHMDHVVRRAVALGL"
BASE COUNT          486 a          620 c          571 g          364 t
ORIGIN      
        1 tgggcgcata cctcggtgcc ggcacgaaga tcaacggcaa actccatttc gaaggccaag
       61 tgacgatcga tggcgaagtt gaaggagaaa tcgtcgctca ggcccatatc atcgtaggcc
      121 agcaggcaac tatcaaaggt aaagtgaccg cgcaatcgat attggtgcag ggcaaggtaa
      181 tggccgatgt cgtgaccgaa aagaaactgg aaatccagcc gccgggcacg gtgatgggcg
      241 atgtgaccac acaaagctta gtgatcggcg atggcgccgt gctcgaaggg catatctcga
      301 tgaggaaaaa cgaggcccgt gccatcccgc tgcgccaaga gcagaaaaaa gaaggcagcg
      361 tttcctaggc ttcagtccgc gaacagcggc actatcctcc gctctttcgc gttcaccaaa
      421 ccacgcgcgg taatccgcag cgccggcaag gtcacgaacg gcaagaagtt caaagcaaag
      481 atgggcttgt cgagagacga gcccatttct tttagacagc cttgaatgcg ccgcatcccc
      541 gtgccgattt cctgccacgg caacaacgaa aaaattccgc caacgggaaa ttccattttc
      601 tccaccacct gaccgccatc gacgatcgcc atcccgccac cgacctccag taaaacattc
      661 gcgcaccgtg ccatgtcagc atcgtcgctg ccgacgatca tcaaggtatt ttcatccagg
      721 ttggtcgtca gaccgacggc gccgaccttt gcgccgaacc cattgagaaa accgaaggca
      781 acttgcggcg atttcccatg ccggtcgaac atcgcgactt tgagaatgtc gtggtaaaga
      841 ctcgcctcga cgaaaccatt ggccgcgttg aactcgacaa tccgctgcgc cgtgatcgtc
      901 tggttcacca gctccatcac acgcactttg ggattagcgc gtggagcggc aatcttgaac
      961 acggcatgcg aaatcggcaa gccgacgcgc aacgaacaca gcagatcctg gggcagcgcc
     1021 atcgcttcac cgtgaaattc cgacacgcca ttgccggcta cgcgcttccc gcccacacgc
     1081 acctcgcgca catggcacgg gtcaaggtcg tcgagcaaag ccagatcggc gaagcgtccc
     1141 ggcgcaatgc cgccgacatc ctgttcaatc gccgagtaaa ccgcgggatt gagggttacg
     1201 cactgaatcg cttgcagcgg ctaaagtccc aacgcgacag ctcgccgcac gacatgatcc
     1261 atatggccgt gctcggcgac atcatccggc gtcatgctat cggtgacgag aatcagccgc
     1321 tgcaggctca cgcctgaggt gatcaattcc ggcagcgtag tcgccaagtc ttggcgcaac
     1381 gagccttcgc gcagcatggt ccagtagccc aagcgcaacc gctccagcgc atcctcaaag
     1441 cgaatcggtt catgacaaga agagatgccg gtggcggcca ccgcgcagag tttttgatcg
     1501 cgcgcgccgg cggtgtggcc atgcactatc tgaccgcgcc gcgaggccaa ctccaagcgc
     1561 gccagcagtt catcgtcgca ttgcgtcaac cgcagccagg agacgatctc gcccatgccg
     1621 agcacgcggg catcgtccag cgccgcggcg atctcttcgt tggtgaattc cgccgtgctg
     1681 cacaacattg ggtcctgggg ggctgccatg gagaccagcg tgtagacccg caatggatgc
     1741 ttttcgactt cgtcaagaaa aagtttcaag ccgcgtaggc cgaggacgct tgacaattcg
     1801 tcacaggacg caaccagcga ggtggttccg tgcggcagaa acgattggag attttcaaag
     1861 ggccgagcgt aatgaccgat atgagtatga ccgtctataa aaccgggcga gatgtaacaa
     1921 ccggaagcat cgagcacctc tgtgtgctcg ccgcgggtat gcttggcgct ggagcccacg
     1981 tagcaaatcc gtccgtcgag cacggcgatc tcgacacctt ctagaatttc acgggaataa
     2041 a
//
LOCUS       DATIRS010000611         3020 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_340693, whole genome shotgun sequence.
ACCESSION   DATIRS010000611 DATIRS010000000
VERSION     DATIRS010000611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3020
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_340693"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(177..1058)
                     /locus_tag="VLM90_07735"
     CDS             complement(177..1058)
                     /locus_tag="VLM90_07735"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSQ12892.1"
                     /translation="MLAQQFVNAISLGGVYALFALGFTLIFGVLNVVNLAHGAIFMLG
                     AYTALQAVVLFKFPLALAMGAAIVVTGTAGWLLDRLIFAPLRARQAPHLAPMIATIGL
                     GISLNSTIQGIFGAENLRFPVHGLAAESLQFDGVQVTWLEIQIILLAFVLMAVLLWWL
                     KHTRMGCALRALAESRKAAALLGIDVEGLFRVTSVIAALLGGVAGVLIALYTNAVFPQ
                     MGQPMLHKGIAVVILGGMGDIRGALLGGFFLGCAEVFSVAYIGSTMRDAVAFGLLFAI
                     LLLRPEGLFGKAAQRRA"
     gene            complement(1062..2216)
                     /locus_tag="VLM90_07740"
     CDS             complement(1062..2216)
                     /locus_tag="VLM90_07740"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12893.1"
                     /translation="MSMQLTRVLFGALVALGYLSSLAAAQIKIGVAEALTGNAAQYGV
                     PIRKGFELAVSEINASGGIHGNKLELIVEDEQGKKEEAINVFKKLIFQDKVLMLFGPT
                     LSNSAQASDPVAQAAKVVVFGTSNTADGITSIGNYVFRNSVTEADILPVTLKVAAQKT
                     GLKKVAVLYGNDDIFTKSGYDNFKKALETLKIPVTTTETFAKGDVDFKPQLTKIKASK
                     ADAIVLSALVAEGAPAMVQARQLGITLPVIGGNGMNSPKVFDLAKDNSDNLWVGSPWS
                     SENSAAENKRFIAAYQKAHSAMPDQFAAQAYDAMHIVAEALKQVKLTGKLEADRNALR
                     NALPAVQIAGATGPFKFRQVKSKDGKPAGYDAVQTAIVMMTKGNQYVIQK"
     gene            complement(2234..2794)
                     /locus_tag="VLM90_07745"
     CDS             complement(2234..2794)
                     /locus_tag="VLM90_07745"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSQ12894.1"
                     /translation="MKRIVSSLLLALAMIWVQTAARVSAQEGKIVPYVPTPQEVVDRM
                     LELAQVKKGDVVYDLGSGDGRIVVTAAKKYGVKAIGFEIDPERIKESHENIKKAGVEK
                     LVEIRQQDIRTVDLSGANVLTMYLLPEVNLMIRPNIWKQMRPGSRIVSHDFDMGDWKP
                     IKTEHIKDGSSWDHTLYLWHVEAAKK"
BASE COUNT          664 a          907 c          798 g          651 t
ORIGIN      
        1 cgttggtgcc gatggaaagc accaacgtgc tataagtcgc ccaaaaagtt tcgagccatt
       61 ccatgtcttt gagctaacgt cactaattaa actccgtatc gcagcttgac gaactctgca
      121 ctccgaattt gaactttgaa ccttgaacgt tgatccacgc cccaagggcg ttcagatcag
      181 gcgcgccgtt gcgcagcttt gccgaacaag ccttcgggtc ggagtaacag gatagcgaac
      241 agcaggccga aggcgacagc gtcacgcatg gtcgagccga tataagccac ggaaaaaacc
      301 tcggcacaac caagaaagaa accgccgagc agagcgccgc ggatatcgcc catgccgccg
      361 aggatgacca ccgcgatgcc tttgtgcagc atcggttgac ccatctgggg aaacaccgcg
      421 ttggtgtaga gcgcgatcaa gacgccggcc acgccaccca ggagcgcggc gatgaccgaa
      481 gtcacgcgaa acaacccctc gacgtcgatg cccaacagcg ccgccgcctt gcgcgactcc
      541 gccaacgcgc gcagggcaca tcccatgcgc gtgtgtttga gccaccatag caacacagcc
      601 atgaggacga acgccagaag aattatctga atctccagcc aggtaacttg cacgccgtca
      661 aactgcaaac tttcagcggc caagccatgc accgggaaac gcaaattctc ggcgccgaaa
      721 ataccctgga tggtactgtt tagagaaata cccaaaccga tggtggcgat catcggcgcc
      781 aaatgaggcg cctggcgcgc tcttagcggc gcgaagatca agcggtcaag caaccaaccg
      841 gcggtaccgg tgacgacgat cgccgcgccc atcgccagag ccagagggaa tttgaaaagc
      901 accaccgctt gcagcgccgt gtaagcgcca agcatgaata tagcaccatg ggcgaggttg
      961 acgacgttca gaacgccgaa gatcagggtg aaaccgagag cgaatagcgc gtagacaccg
     1021 cccagggaga tcgcgttgac gaattgctgg gcgagcatcg gttatttttg aatcacgtat
     1081 tggttaccct tggtcatcat cacgatggcg gtctgcacgg cgtcgtaacc ggccggcttg
     1141 ccgtccttgc tcttgacctg gcgaaacttg aagggtccgg tggcgccggc gatttgcacc
     1201 gccggcaagg cgttgcggag cgcgttgcga tcggcttcga gcttgccggt gagtttcacc
     1261 tgcttcagcg cctcggcgac gatatgcatg gcgtcgtagg cttgggcggc gaactggtcc
     1321 ggcatcgcgc tgtgcgcttt ctgataagcg gcgatgaagc gtttgttctc cgccgccgaa
     1381 ttctcgctgg accaggggct gccgacccac aggttgtcgg agttgtcttt ggccaaatca
     1441 aagactttag gcgaattcat accgttgcca ccgatcaccg gcagagtgat acccagctgg
     1501 cgcgcttgca ccatcgccgg cgcgccttcc gcaaccaacg ccgacaggac gatcgcatcg
     1561 gccttactgg ctttgatctt ggtcagctgc ggcttgaaat cgacatcacc cttggcgaag
     1621 gtttcggtgg tggtcaccgg gatcttaaga gtctccagtg cttttttgaa gttatcgtaa
     1681 ccgctcttgg taaaaatatc gtcgttgccg tagagcaccg cgactttttt caagccggtc
     1741 ttctgcgccg cgaccttcaa ggtcaccggc aaaatatcgg cctcggtgac cgaattgcga
     1801 aacacgtaat tgccgatgga agtgatgccg tcggcggtat tcgaggtgcc gaagaccacc
     1861 accttggctg cctgcgccac cggatcggag gcctgcgccg aattggacag cgtcggcccg
     1921 aacagcatca acaccttgtc ttgaaatatc agcttcttga aaacgttgat cgcttcttct
     1981 tttttgccct gctcgtcttc gacaattagc tcgagcttgt tgccatggat tccgccgcta
     2041 gcgttgatct cgctcaccgc caactcgaac cccttgcgga tcggcacgcc gtactgcgcg
     2101 gcattgccgg tcaacgcttc ggcgacgccg atcttgatct gcgccgcagc aagacttgat
     2161 aaatagccga gcgctacgag tgcgccaaac aaaactcttg tcagttgcat actcatcgtt
     2221 tgcgcaaacc ggactatttc ttcgctgcct cgacgtgcca gagatacaga gtgtgatccc
     2281 agctcgaacc gtctttgata tgttcagttt ttatcggctt ccaatcaccc atatcgaaat
     2341 cgtgggagac gatgcgcgag ccgggcctca tctgtttcca aatattcggc cggatcatca
     2401 aattcacctc gggcaacaaa tacatcgtca agacgttggc gcctgacaga tcgaccgtgc
     2461 gaatatcctg ctggcggatt tcgaccagtt tttcaacccc ggctttcttg atgttctcat
     2521 gggactcttt gatccgctcc ggatcgattt cgaagccgat cgccttgaca ccgtacttct
     2581 tcgccgccgt gacgacaatg cgtccgtcgc ccgatccgag atcgtagacg acatcgccct
     2641 tcttcacctg ggccaactcg agcatgcggt caacaacttc ctgaggcgtc ggcacgtaag
     2701 gcacgatctt gccctcctgc gccgaaaccc gcgccgctgt ttgcacccag atcatcgcca
     2761 atgccagcaa cagagagctt acgattcttt tcattgtcgc ctcctttagc taactaaatt
     2821 tcgactgcga attccgatcg gtgcgcagcg caccctgcga agctgcccag atagtccaag
     2881 agggcgggtt taaaaaccgc cctacagttt ataatttttt tgtgtccttt gcgttctttg
     2941 cggccaacat tctaattccg aatcttccgc caacaatcat ctcagccgtt tttttgccag
     3001 aaccgaccca gccagctgcc
//
LOCUS       DATIRS010000612         1660 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_832542, whole genome shotgun sequence.
ACCESSION   DATIRS010000612 DATIRS010000000
VERSION     DATIRS010000612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1660
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_832542"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..203
                     /locus_tag="VLM90_07750"
     CDS             <1..203
                     /locus_tag="VLM90_07750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12895.1"
                     /translation="IAVVGGLIISQILTLYITPVVYLYLEKSQEFVQTLPARLRGRAK
                     DAVPATQASALGVDNPSPQKAP"
     gene            391..1512
                     /locus_tag="VLM90_07755"
     CDS             391..1512
                     /locus_tag="VLM90_07755"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSQ12896.1"
                     /translation="MRFGWFLVVCVIVSAGYFYARPDLRALPIWLGAEEEVAVHVTVV
                     RKVAGPITIRLKGELAPVKAVDIVSPFAGRVVEVRFKAGDAVRAGAILATIHAGALEQ
                     RITELEAAVAVAEQDLKTNEERLADAEKQMARQDELLRQDLIPRRDLEEAQVRAKNAR
                     AQREFQRAQLIQQQAMLAQARALRARTRLTAPFSGVVSRRLAEPGAAIAESGAILTIV
                     DVDSLKLAASFVGTHFADIRAGMPVEISSRAAPGQTLAGTVVRVYPPAGDGLENAQVE
                     IHAGVTQRNFRPGMAVEAVIVLAKRQEALWVPRSAVMAMQGKNYVYRLAGGRALRQEI
                     ALGAVRNGDVEVTQGIDDGDAVIIDQLNLLKPGIRVQPQ"
BASE COUNT          322 a          454 c          530 g          354 t
ORIGIN      
        1 gcatcgccgt ggtcggcggt ttgatcatct cgcagatttt gactttgtac atcacgccgg
       61 tggtttatct ctatctggaa aagtcccagg aattcgtgca gacattgcct gcgcggctgc
      121 gcggccgggc caaagacgcc gtgcctgcaa ctcaagcgtc cgcgctcggc gtcgacaatc
      181 cgtcaccgca aaaagcccct tgatctcaac gcgtcgcaga ctagcgacat ttacccctgc
      241 tttattcttc gggttatcgc tggcgcgacg gcgataaccc gatgttgttt gtgagatcta
      301 gaaatttctc cgctgttcga ggacgattac tcacgagtgc ttcggcgtga tgttgccatc
      361 ggccatcggt ttgccaataa cagtgacctg atgcgtttcg gctggtttct cgtcgtttgc
      421 gtgattgtat ccgcggggta cttctacgcg cgcccggatc tccgagcctt gccgatttgg
      481 ctcggcgccg aggaagaagt cgctgtccac gtcacagtcg tgcggaaggt cgccggaccc
      541 attaccatcc gtctgaaggg cgagctcgcg ccggtgaaag ccgtcgacat cgtttcgccc
      601 tttgccggca gggtcgtcga agtccgtttc aaagccggcg acgcggtccg tgccggcgcg
      661 attctggcca cgattcacgc cggggcgctg gagcagcgca tcacggagct cgaagccgca
      721 gtggcagtgg ccgagcagga tctcaagacg aacgaagaac ggctcgcgga tgcggaaaag
      781 caaatggcgc ggcaagatga gttgctgcgt caggatctga tcccccggcg cgatctcgaa
      841 gaagcgcaag tgcgagcgaa aaatgcgcgg gcgcaacgcg aatttcagcg cgcgcagctg
      901 atccaacagc aggcgatgct ggcgcaggcg cgcgcgctac gagctcgaac gcggctgacc
      961 gcgccgttca gtggagtggt cagccggagg ttggcggagc ccggcgccgc cattgcggaa
     1021 tcgggcgcga tccttaccat tgtcgatgtt gattcgctaa agctggccgc cagttttgtt
     1081 ggtactcatt ttgccgatat tcgcgcgggt atgccggtcg agatttccag tcgcgccgca
     1141 cccggccaga cgctggcagg gacagtggtg cgtgtgtacc cgccggcagg tgacggcctg
     1201 gaaaacgcgc aggtggagat tcacgccggc gtgactcaga gaaacttccg tccgggtatg
     1261 gcggtcgagg cggtaatcgt tctagcgaag cgacaagaag ccttgtgggt gccgcgctcc
     1321 gccgtgatgg cgatgcaggg aaagaattat gtttacaggc ttgccggcgg ccgagcgttg
     1381 cgccaggaga tcgcgcttgg cgcagtgcgg aacggagatg tggaagttac ccaaggaatt
     1441 gacgacgggg acgccgtgat tattgatcag ctaaatttgt taaaaccagg tatccgagtg
     1501 cagccacagt aggaataaaa ctttgttgct gggctcgggg cgtaaaattc tcagaattgg
     1561 acgttgttcg aaagttaatt cctaccaact gaacgggttg agtgctttgg cggcgttctc
     1621 taaatcctgg cgcatttgct cgaacgctcc tttgggctcg
//
LOCUS       DATIRS010000613         7581 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_340807, whole genome shotgun sequence.
ACCESSION   DATIRS010000613 DATIRS010000000
VERSION     DATIRS010000613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 7581)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7581)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7581
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_340807"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            156..899
                     /locus_tag="VLM90_07760"
     CDS             156..899
                     /locus_tag="VLM90_07760"
                     /inference="COORDINATES: protein motif:HMM:NF013183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HSQ12897.1"
                     /translation="MGALTGVGIASITVYKRPRVALISTGDEIVDAEIDPQPGQVRNI
                     NQHSLAGLIEEAGGELKDWGVIRDDRALLTEAIGAALDWADAVLLSGGSSMGAKDIAL
                     ETILSFPDSQFIFHGISIAPGKPTIFAKACGKPILGLPSYPVSALVIFDLFGAPMLRR
                     LGGESLDALERFSRTVRAKLTTNISSQLGREDYVRVVMQGEGTGFVATPLPSKSGAIF
                     TLVKADGMVRIGMNQDGLEQGEEVDVILF"
     gene            949..2880
                     /locus_tag="VLM90_07765"
     CDS             949..2880
                     /locus_tag="VLM90_07765"
                     /inference="COORDINATES: protein motif:HMM:NF011068.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0032324 - molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin biosynthesis protein"
                     /protein_id="HSQ12898.1"
                     /translation="MARKRYLKKTPLSEARELFLSTVNPAALAIEEIAIDDALDRITA
                     EPVFAKISSPHYHASAMDGICVRAEETFGATEFVGKKLTLTDSDSPRADAFRYVDTGN
                     ALPAWANAVIMIEKVHQVDATTIEIFESVAPWNHVRLVGEDVVATELLLPRSHRLRPY
                     DLGALLAAGHTTVRVKARPRVGIIPTGDELIQPGEEATPGAVIDFNSTVLAAFVREWG
                     GMPVRYSRARDDEQLLRAALERAGAECDLVTIIAGSSAGEHDLTADVVAAAGELLAHG
                     IDVMPGKPAVLGSLNGKPVLGVPGYPVSAIVIAREILRPALEKFLGNIPSMLPTVRAI
                     VPKKIASHLGLEEFIRVTLGRVDEKLVAVPLARGAGVITTMVHADGLMRIASLVEGLN
                     AGENAEVELLRPMVDIENTILCTGSHDLAIGVLEDQLKLRHAELKIAAANVGSLGGLL
                     AMQRGETHIAGTHLLDPASGVYNIPDIQRAIPNVPVVLVHLAQREQGIIVSRGNPKAL
                     RGLEDLARHDIRFVNRQQGSGTRVLLDYQLKKLRLDGAAISVYEREEFTHMAVGVAVE
                     SGLADAGLGVRAAAQALGLDFIPVANEQYDLLIERRFFESPRGELLLATICSGGFKGA
                     VCALGGYDTTNAGALLYRQ"
     gene            3475..6087
                     /locus_tag="VLM90_07770"
     CDS             3475..6087
                     /locus_tag="VLM90_07770"
                     /inference="COORDINATES: protein motif:HMM:NF024883.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSQ12899.1"
                     /translation="MAKLQIEKIVQLATGPYLRRLRRRLLLMIAIAVVPVLAVILYQA
                     KVHRDVQILEVHEAAWRLTNVIALRQSQVVDAAKQLLILLAQVPVIARGDQGACGEVV
                     RGFLAQNRAYLDIGVFEPAGAMRCRARDSGSVNTLARSSLLRRVLATKDFVIGDHHVL
                     GNWRRRTLTFAYPILDENGAVRDVLFAALDMKQIDQLTAESNLPAGMALTILDSNGTI
                     LTRVPDHEEWAGRQLPDAPLLELMQLRHQTTKEIAGLDGITRLYAFKTVGDSRERGQL
                     HVIVGVPKAIAYREADQTLLWNLFGIAMLTGIASGVAWLVGSRSVVEYLKNRGDIEDA
                     RARLGAIVESSEDGIVGMTLDGAITTWNSGAEQMYGYDAASIIGQNIAVLTPLEHRDE
                     IPELMQIVSLGKGINRYESERICKDGRRIAVSASLSPIRDSQGSIRGAATITRDITLL
                     RKGEEQMAIHNRQLETLQTVAQEITESLSLAETMPQTLETLVALVPCDHAIVYLIGAD
                     GAVNSFSASRGAGDKALHGRLADDMAAAATQCTGEWFVEDVTTVPELAALWPQYGVRA
                     TAILPMTRKDRGRTTLVVLDSSAHSFGVDDTQFLKALARQIALGVENGQLYKSSLTLI
                     DNLAGEIEERKKAEKQLADFNAMVVHDLRSPLANIVSMAESVKEGLFGDVNELQRNWL
                     GKIENNCRGLIDQVSDFLDFSRIDAGKLVLKRERASIGSQIHEILAQHSIEAKKRDIT
                     LTARIDERLPVLWADSRRVGQVLTNLMSNALKFTDNGGAVEVSAWPSDTAIVVSVRDT
                     GVGIAADDLGDIFQMYGQAASSDKSQRHSTGIGLVICKKIIEAHGGRIWVESEVGSGS
                     SFYFSLPAQGEKVE"
     gene            complement(6089..>7581)
                     /locus_tag="VLM90_07775"
     CDS             complement(6089..>7581)
                     /locus_tag="VLM90_07775"
                     /EC_number="6.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013225.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit beta"
                     /protein_id="HSQ12900.1"
                     /translation="GDPKTAAKLHEQGNLTARERIDKLLDPGTFVEEFMLAETPCMDF
                     GMAERKQPSDGVVTGFGKIDGRPVYVYSQDRSILAGSVGAAHAEKIAYVIQTARKIGV
                     PVIGLNDSAGARIQEGLSVTSAIGKIFFENSIASGCIPQISAIMGPCIGVGSYSPALT
                     DVILQVQNSGQMFITGPAVIKEVLGETVTMEELGGAKIHSEISGVTDLVAKNDEECLA
                     MIRRLVGFLPPSFEEKPPRKITTDDPGRMLDNLEKLVPEDMKRAYNIVQVIKAIVDDG
                     DFFELKAKFARNLVIGFGRLDGYPAGFVANQPMFLAGSLDVDASDKAARFIRFCDAFN
                     VPVITLMDVPGFFPGKQQEEKGIIRHGAKMLYAYAEATVPKITIVLRKGYGGAKQALC
                     TREMGADQLFVWPGVELAVMGGGGAVNVLYKKEIDQSADPAKTRTEKLAEYLERFSGP
                     FEALSKQFAQAAIRPADTRKRLIQSLEILGNKKEQRPRKKHGLMPV"
BASE COUNT         1516 a         2151 c         2311 g         1603 t
ORIGIN      
        1 ccgtggtgat ggttgagtat accgacgaga ccgacggcgg cttggtggaa attcaccgcg
       61 ccgtgtcgcc cgggcaaaac gtcattcaaa tcggcgacga tatcaaaaaa ggctagccgg
      121 ttttttctca aggacggcgg ctacgcagcc atgatttggg cgcgctcact ggcgtcggca
      181 ttgcatcgat tacggtctac aaacggccgc gtgtcgcgct gatctccacc ggcgacgaga
      241 ttgtcgacgc agaaattgac ccgcagccgg ggcaggtgcg taacatcaac cagcattcgc
      301 tcgccggttt gatcgaagaa gccggcggcg agctcaaaga ttggggcgtg atccgcgacg
      361 atcgcgcgct gttgaccgag gcgatcggtg cagcactcga ttgggcggac gccgtgctgc
      421 tttcgggcgg tagctccatg ggcgccaagg acatcgcctt ggaaacgatc ctgtcgtttc
      481 ctgattcgca atttattttc catggcatct ccatcgcgcc aggcaagccg acgatcttcg
      541 ccaaagcatg cggcaagccg atcctcggat tgccgagcta tccggtttcc gctctggtga
      601 tcttcgatct gttcggcgca ccgatgctgc gccgcttggg cggcgaaagc ctcgacgcgc
      661 tggagcgttt tagccgcacc gtgcgggcaa aattgaccac caacatctcg tcgcaattag
      721 ggcgcgaaga ctacgtccgt gtggttatgc aaggcgaagg tacgggcttt gtcgcgacgc
      781 ccttaccgag taaatccggc gcgattttca ctctggtcaa ggccgacggc atggtgcgca
      841 tcggcatgaa tcaagatggc ctcgaacagg gcgaagaagt ggatgtgatc ctgttctaac
      901 gatcggcgtc agcaccgaga atagagatgg gaactaacaa atgggcttat ggcgcgtaag
      961 agatatttaa agaaaacgcc gctcagcgaa gcgcgcgagc tatttttgtc gacggtcaac
     1021 ccggcggcgt tagcgatcga agagattgcc atcgacgacg ctctcgaccg gattaccgcc
     1081 gagccagtgt tcgccaagat ctcctcgccg cattatcatg cctcggcgat ggatgggatc
     1141 tgcgtgcgcg cggaagagac cttcggcgcg acggagttcg tcggcaagaa actcacactg
     1201 accgattccg attctcctcg cgccgatgct tttcgctacg tcgataccgg taacgcgctg
     1261 ccagcctggg ccaacgccgt catcatgatc gagaaagtgc accaggtcga tgcgaccacc
     1321 atcgagattt tcgaatcggt ggcgccgtgg aatcatgtgc gcttggtcgg tgaagatgtt
     1381 gtcgccaccg agctgctgtt gccccgttcc catcggctgc gcccctacga tttgggcgcg
     1441 ttgttggcgg ctggtcatac gacggtgcgg gtcaaggcgc ggcctcgggt tggcatcatt
     1501 cccaccgggg atgagctgat tcaacctggc gaggaagcca cgccaggcgc ggtgatcgat
     1561 ttcaattcga cggtgctggc ggctttcgtc cgcgaatggg gcggtatgcc ggtccggtat
     1621 tcgcgcgccc gcgacgatga gcagttgctg cgggcggcgc tcgagcgcgc cggtgccgag
     1681 tgcgatctgg tgacgatcat cgccggctcc tcggcgggcg agcatgatct caccgccgat
     1741 gtggtggccg ccgccggcga attgctcgcc catggcatcg acgtgatgcc gggcaagccc
     1801 gccgtgctcg gttctctcaa tggcaagccg gtgctcggtg tgccgggtta cccggtgtcg
     1861 gcgatcgtca ttgcccgcga aattctccgt ccggccttgg aaaagtttct tggcaatatc
     1921 ccgtcgatgt tgccgacggt gcgcgccatc gtgccgaaaa aaatcgcctc tcatttgggt
     1981 ttggaagagt tcattcgcgt gacgttgggc cgggtcgacg agaaactggt cgccgtgccg
     2041 ttggcgcgcg gcgccggggt gatcacaacc atggtgcatg ccgacggttt gatgcgcatc
     2101 gccagtttgg tcgaagggct caacgccggt gaaaatgccg aggtggaact gttgcggccg
     2161 atggtggata tcgaaaatac catactctgc accggcagcc atgacttggc gattggcgtg
     2221 ctcgaagacc aacttaaact gcgccacgcg gagttgaaaa ttgccgccgc taacgttggc
     2281 agcttgggcg gcctactcgc catgcagcgc ggtgagaccc atatcgccgg cacccatctg
     2341 ctcgatcccg ccagtggcgt ctacaacatt ccagatattc agcgggcgat tcccaatgtt
     2401 ccggtcgtcc tggttcatct ggcgcagcgc gagcagggca tcatcgtcag ccgcggcaat
     2461 cccaaagcgc tgcgcggctt ggaggatctt gcgcgtcacg atatacgctt cgtcaatcgc
     2521 cagcagggct cgggcacgcg agttttgttg gattaccagc tcaagaaact aaggctcgat
     2581 ggcgcggcta tctccgttta cgagcgcgaa gagttcaccc atatggcggt cggcgtcgcg
     2641 gtggagagcg gcctagccga tgccggtctg ggcgtgcgcg ccgcggccca ggcgttgggc
     2701 ctcgacttca ttccagtcgc caacgaacaa tatgatttgc tcatcgagcg gcgatttttc
     2761 gaatctccgc gcggtgaatt gctgctggcg acgatctgtt ctggcggctt caagggcgcg
     2821 gtctgcgctt tgggcggtta cgacaccacc aacgctggtg cgctactcta ccgccagtga
     2881 tgcttcttcc agcgctttaa accttttttc gcgacatcgc cattgtcatc gttgctcggg
     2941 ttttccgctt gacccatccg gcgtacatcg ccgatgaagt aacattgacc tcgttttggc
     3001 cggcaatatg ctgcgccgcg gcgaagattt gaccgcgccg cccgctattg gaccccgcag
     3061 tatcgatttg ttcaaatttg ttgccaaggg tgctaaatcg caccatcgct gcgctataaa
     3121 aagcttaaaa tacgacaact tagcttttcg tcgcctggca ttgccattgc gtttatagac
     3181 cgacgcgaag ctatggaaag aactaacgaa tccctgcagc tactgaccct tacctaagcc
     3241 gctcagttac tccatgtctc aaccaagact ttgcaacgca tgattcgcag cggcgatttg
     3301 ccggcgctca aagtcggcgg ccaatggcgc ctgcgggaat gccagctaat cagttggatc
     3361 caaagccgcg aaggtaagtc acattcataa gcccgcgact ccatctaacg gttagagcgc
     3421 cgtgggtgcc gccaaagcag accactagcg accccatcgg cagcaggact aaagttggcg
     3481 aagctccaga ttgaaaaaat cgtccagttg gcaactgggc cgtatttgcg ccggctgcgc
     3541 cggcgtttgt tgctgatgat tgccatcgcc gtggtgccgg ttcttgcggt tatcttgtac
     3601 caggcgaaag ttcaccgcga tgtgcaaatt ctcgaggtcc atgaggcggc ctggcggctt
     3661 accaatgtca ttgcgctgcg tcagtcgcaa gtcgtcgatg cggctaagca gttactgatt
     3721 ctgttggctc aggtaccggt gatcgccaga ggcgaccagg gtgcctgtgg cgaggttgtg
     3781 cgcggattct tagcgcaaaa ccgagcctac ttggatattg gcgtatttga gccagcggga
     3841 gcgatgcgct gtcgcgcacg tgactccggt tccgtgaata ctttggcgcg cagttcgctg
     3901 ctgcggcgag tcttggcaac taaagacttt gtcatcggtg atcaccatgt gctcggcaac
     3961 tggcggcgcc ggacgctcac gttcgcctat ccgattctgg atgaaaacgg ggcggtcagg
     4021 gatgtcctat tcgcggcgtt agacatgaaa cagatcgacc agttaaccgc cgagagtaac
     4081 ctgccggcgg gcatggcgct gacgatcctc gatagtaatg gaacgatcct gacgcgggtt
     4141 cccgatcatg aagaatgggc cggcaggcaa ctgcccgatg cgccgctctt ggagctgatg
     4201 cagctgcgcc atcaaaccac caaagagatc gccggcctgg atgggatcac acggctctat
     4261 gcgttcaaaa ccgtcggcga cagccgcgaa cgcggccagc tccatgtcat cgtcggcgtg
     4321 ccgaaggcga tcgcctaccg ggaagctgac cagacgctgc tgtggaacct gtttggaatc
     4381 gcgatgctca ccggaatcgc tagcggagtg gcctggctcg tcggtagtag atcggtcgtc
     4441 gaatacctga aaaaccgcgg cgacatcgaa gacgcccgag ccaggttggg cgccatcgtc
     4501 gagtcttctg aagacggcat cgtcggcatg accctcgatg gtgcgatcac cacttggaac
     4561 agcggcgccg aacagatgta tggctacgat gccgcgagca tcatcggcca gaatatcgcg
     4621 gtgctgacac cgctggagca ccgtgacgag atccctgaac tgatgcagat cgtgagcttg
     4681 ggtaagggca tcaatcgtta cgaaagcgaa cgcatctgta aggatggccg gcgcattgcc
     4741 gtgtccgctt ccctgtcacc gatacgcgat tcgcagggaa gtatacgcgg cgccgcgacg
     4801 atcacccgcg acattacgct gttgcgcaaa ggtgaagaac aaatggcgat acacaaccgc
     4861 cagttggaaa cccttcagac ggtggctcaa gaaatcaccg aatccctgtc cttggcggaa
     4921 accatgccgc agacgcttga gacgctggtc gcgctggtgc cgtgcgatca tgcgatagtt
     4981 tatttgatcg gcgccgatgg cgcggttaat tcgttctcgg cgagccgcgg ggctggcgac
     5041 aaagcgctcc atgggcgatt ggccgatgat atggcagcgg ccgcaaccca atgcaccggc
     5101 gagtggttcg tcgaagatgt gactacggtg ccggaactcg cagccttgtg gccgcaatat
     5161 ggagttagag cgacggcgat tttaccgatg acgcgcaagg accggggccg gaccaccttg
     5221 gttgtgctcg acagttccgc gcattcgttc ggtgtcgacg atacccaatt tctcaaggcg
     5281 ttggcccggc agatcgccct cggcgtcgag aatggccagc tctacaagtc ttcactcacc
     5341 ctgattgaca acttggcggg cgaaatcgaa gagcgtaaaa aggccgaaaa gcagctggcc
     5401 gacttcaatg ccatggtggt tcacgatctc cgttcgccgc ttgccaacat cgtctcgatg
     5461 gcggagtcgg tgaaggaagg gttgttcggc gacgtcaacg agttgcaacg gaattggctt
     5521 ggtaagatcg aaaacaactg ccgcggcctg atcgatcagg tgagcgattt tctggatttt
     5581 tcgcgcatcg atgccggcaa actggtgctc aaacgcgagc gggcaagtat cggttcgcaa
     5641 attcacgaga tcttggcgca acactccatc gaagccaaga agcgcgatat tacactaacc
     5701 gcgcggatcg acgagcgcct gccggtactc tgggcggatt cgcgccgtgt cggacaagtg
     5761 ctgacgaact taatgagcaa cgccctcaag tttaccgaca acggcggggc cgtcgaggtg
     5821 tccgcatggc cgagcgatac tgcaatcgtc gtctcggtgc gcgacaccgg cgtcggcata
     5881 gcggccgatg atctcggtga tatttttcaa atgtatggcc aggcggcgag cagtgacaag
     5941 agccagcgtc acagcaccgg tatcgggctg gtgatttgca agaagattat cgaagcccat
     6001 ggcgggcgca tctgggtcga gagcgaagtc ggcagcggca gcagctttta tttttccttg
     6061 ccggcacagg gcgaaaaagt tgagtagctt acaccggcat gagcccatgt tttttacgtg
     6121 gccgttgttc ttttttatta cctaagattt ccagcgattg aatcagccgc ttgcgggtat
     6181 cggcgggcct gatcgcggcc tgggcgaact gtttggacag cgcttcgaag gggccgctga
     6241 agcgctccag atattcagcg agtttttccg tccgggtctt tgccggatcg gccgactggt
     6301 cgatttcttt cttgtagagc acgttcaccg ctccgccgcc gcccatgacc gcgagctcca
     6361 cgccgggcca aacgaataat tgatcggcac ccatctcccg cgtacacagc gcctgtttgg
     6421 cgccgccgta gcctttgcgc agcacaatgg tgattttcgg cacggtggct tcggcgtagg
     6481 cgtaaagcat cttggcgccg tggcgaatga tgcctttttc ttcctgctgt ttgccgggaa
     6541 agaaacccgg gacatccatc aaggtaatca ccgggacatt gaaggcatcg cagaagcgga
     6601 taaagcgcgc cgccttgtcc gaggcgtcga catccagact gccggcgaga aacatcggtt
     6661 gattggcgac gaagcccgcc ggatagccgt cgaggcggcc gaagccgatg accagattgc
     6721 gcgcgaactt ggctttcaat tcgaaaaaat cgccgtcatc gacgatggct ttgatcacct
     6781 ggacgatgtt gtaggcgcgc ttcatgtctt cgggcacgag cttttctaag ttatcgagca
     6841 tgcggccggg atcgtcggtg gttattttgc gcggtggttt ttcctcgaaa ctcggcggta
     6901 ggaaaccgac cagccggcga atcatcgcca aacattcctc atcgtttttc gccaccaagt
     6961 cggtgacgcc ggaaatctcc gagtgaattt tggcgccgcc caactcttcc atggtgacgg
     7021 tttcgcccaa cacctccttg atcaccgccg ggccggtaat gaacatttga ccggagtttt
     7081 gcacttgcaa aatcacatcg gtgagcgccg gcgaatagga gccgacaccg atgcagggac
     7141 ccatgatcgc ggagatctgc gggatgcagc cggaggcgat gctgttctca aaaaatattt
     7201 tgccgatggc ggaggtgacg ctaagccctt cctgaatgcg cgcgccggcg gagtcgttga
     7261 ggccgatcac cggcacgccg attttgcgcg cggtctgaat cacgtaagcg attttctccg
     7321 cgtgggcggc gcccacgctg cccgccagta tcgagcgatc ctgggaataa acatacactg
     7381 gcctgccgtc gatcttgccg aaaccggtga cgacaccgtc ggagggctgc ttgcgctcgg
     7441 ccatgccgaa gtccatgcac ggcgtctccg cgagcatgaa ttcttcgacg aaggtgccgg
     7501 ggtctaacag tttgtcgatg cgctcacggg cggtgagatt gccttgctcg tgtaacttgg
     7561 ccgcggtctt gggatcgccg g
//
LOCUS       DATIRS010000614         2004 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_242262, whole genome shotgun sequence.
ACCESSION   DATIRS010000614 DATIRS010000000
VERSION     DATIRS010000614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2004
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_242262"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(145..1629)
                     /locus_tag="VLM90_07780"
     CDS             complement(145..1629)
                     /locus_tag="VLM90_07780"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HSQ12901.1"
                     /translation="MAFNILETTIDQVHAAYRSGELTCRQLVQMYLDRIEAYDKNGPA
                     INAIISLNPDALTEADRLDAAYKAAGPVGPLHGIPIVMKDQGDATPMPTTLGSLLFKD
                     YFPGRDAFVVAQLKKAGAIIIGKATLGELGGGDTHGSLFGSTKNPYALERTAGGSSGG
                     SGASVSANFCTVAVGQEGFASIRRPSTWNCVSGMRPTAGLVSRGGVYAGWPSVNGSLG
                     PMARTVTDLAKLLDNMAGYDPDDPVTARGVGRIPESFTKFLDHNGLKGARIGILRESM
                     GYDAEPGSEDFAKITEVFDKSVNDLKTAGAVVVDPIVIPNLKALLAKRAGNFADDEES
                     FREYFGRGGKPPYASRQAAMQSPDFQKVVKGSRERWSRAPSNDANYEYLKAREELMTN
                     LLQVMAEHRLDAIVHKAVEHQPTLIKDGVNPPYVDQKGAPHINTFLVYVPSVVVPAGF
                     TRDQLPAGITFLGRPYDDGNMIKFAYAYEQATKHRKPPSSVTPL"
BASE COUNT          379 a          564 c          630 g          431 t
ORIGIN      
        1 tcgctcatgg ccgcggcaat tcccaatgag cttgccaaaa gcagcggcag cagtagcaaa
       61 taaatgatca gcgacttgtg catcaagcca ttgtaacagg cagttgtggc atggcaaccg
      121 ggctgtggat tttacgcgcc gcgctcacag cggcgtcacg ctcgacggcg gtttgcgatg
      181 tttggtcgcc tgctcgtagg cgtaggcgaa tttgatcatg ttgccgtcgt cgtaggggcg
      241 gccgagaaaa gtaatgccag cgggcagctg gtcgcgggtg aatcccgccg gcaccaccac
      301 cgacggcaca tagaccaaaa acgtattaat atggggcgcg cccttttgat cgacgtaggg
      361 cggattgacg ccgtccttga tcaacgttgg ctgatgttcc acggccttat ggacgatggc
      421 atcgaggcgg tgctcggcca tgacttgcaa gaggttggtc atcagttctt cgcgcgcttt
      481 caaatattcg taattggcgt cgttggatgg tgcgcgtgac cagcgttcac gcgagccttt
      541 gacgaccttc tgaaagtccg gcgactgcat cgccgcttgg cgcgacgcgt agggcggttt
      601 gccgccacgg ccgaagtatt ctctaaagga ttcttcatca tcggcgaagt tgcccgcgcg
      661 cttggctaag agcgctttga gattcgggat gacgatcgga tcgacgacga ccgcgccggc
      721 ggtcttgaga tcgtttaccg atttatcgaa cacctcggtg atcttcgcga aatcttcgga
      781 gccgggttcg gcgtcataac ccatggactc gcgcaggatc ccaatgcgcg cgcctttgag
      841 gccgttgtga tcgagaaatt ttgtaaagct ctccggaatc cggccgacgc cgcgcgcggt
      901 caccggatcg tcggggtcgt agccggccat gttgtcgagc agcttggcca ggtcggtgac
      961 cgtgcgcgcc attggaccca acgaaccgtt gaccgaaggc cagccggcgt aaaccccgcc
     1021 gcggctcacc aagccggcag tcgggcgcat gcccgaaacg caattccatg tcgatggccg
     1081 gcggatcgac gcgaagcctt cctggccgac cgcgaccgtg cagaagtttg ccgatacgct
     1141 ggcgcccgag ccgcccgacg agccgccggc ggtgcgttcg agagcgtagg gatttttcgt
     1201 cgagccgaat aacgaaccat gggtgtcgcc gccgccgagt tcaccgaggg tcgctttgcc
     1261 aatgatgatg gcgccggctt ttttgagctg ggcgacgacg aaggcatcgc ggccgggaaa
     1321 atagtctttg aacagcaagg agcccaatgt cgtcggcatc ggcgtcgcgt cgccctggtc
     1381 tttcatgacg atcggtatgc cgtgcagcgg tcccaccgga cccgcggcct tgtacgcggc
     1441 gtcgaggcgg tcggcttctg tgagcgcgtc gggattgagc gaaatgatcg cattgatcgc
     1501 cgggccattt ttgtcatagg cctcaatgcg atcgagatac atttgcacta gttgacggca
     1561 ggtcagctca ccagatctgt aggcggcatg aacctggtcg atggtggttt cgagaatatt
     1621 aaaagccatg gcagaactcc cttgccgctt aaccggaaca gcgatttcat atgtcagggt
     1681 cgagtcaatg tccagtcggt gatggcaatt tcaatcacgg ctaagactcc ggcacatgtg
     1741 gcgttgaccc gccgccgaga gccgcttgga acggatttgc tgttttcgct gtctgggagc
     1801 ggcgtgtttg tttttagtca acgaactgaa acgccctggc ttggcaccga gggcgttcga
     1861 tttaggtagg attgacggaa acgtcgagcg attcgcttac ccggctttgg cctgcttcaa
     1921 ccctccgggt ccagccagag tcagctggct gttacccaaa tcgattgcgc cttcggcgtc
     1981 ggctcgatgc tcgccggcgc gggc
//
LOCUS       DATIRS010000615         2760 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_45204, whole genome shotgun sequence.
ACCESSION   DATIRS010000615 DATIRS010000000
VERSION     DATIRS010000615.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2760)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2760)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2760
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45204"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(302..1462)
                     /locus_tag="VLM90_07785"
     CDS             complement(302..1462)
                     /locus_tag="VLM90_07785"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HSQ12902.1"
                     /translation="MIFGRHSVLKRGCSTWDPAAVPQGEFQARLDAVRKEMARRGLDA
                     VVIYGDNYSFADICYLTNYFPKVRGGIAVVPRDGAISMLLNIGSRDVPFAKTLTWVED
                     VRASNQVGSDGAKMIKEKGFEKSKVGLADSGHGFPLPQLEDMKTALPNVSWLDCDDIV
                     APLRVAKTARELGAMSEAGSLLSEVCAGAARFIKSGRKEYEIVADIDRLARDKGAEDI
                     RILAGDRRLNPPSFKQAASIGSHWALYLAVQHERYWAEAGRTFILTSDGKIQAAYERA
                     QEIVAAMAKQLRPNGAVTAIDETARKELGEFYAKAAVYGLANGIGLNQWEAPFLNQGD
                     AHEVGAATVGATTLNENMTVALRVTIESDIGVVLYGDSFQVTASGAKSLVGG"
     gene            complement(1590..2699)
                     /locus_tag="VLM90_07790"
     CDS             complement(1590..2699)
                     /locus_tag="VLM90_07790"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HSQ12903.1"
                     /translation="MDGQEVFETRMTQVRQAMRDRGLQTLLVHDAGRHNFLRMNYVAY
                     LTDFISVGPDTMLVVPLDDAPVLYLAPAWDIPRAQEESWVGDVRPFLDFHDRLAKLAG
                     KVGLIGREAMHVGLHDEIVKALDQTPVNSKDIIETMARCKGPFELERMRRAAAIADAG
                     VSALHQDARPGLKEYELAAIVEYKMRSLGAEDNFGMVVANHHNQALHPPTDRVVQPGD
                     IIIGEITPCIGGLFVQICRTVVLGEPPPVVREKYAILHKAMGLGMAAAQTGAPASAVA
                     KAINGTFIEYGYAEYCRPPFMRVRGHGLGCGSSAPGSLEDDNKTKLEEGMTFIIHPNQ
                     YVPETGYLTLGDTVVMGKNQAESLMKSSWDLHIKE"
BASE COUNT          570 a          883 c          726 g          581 t
ORIGIN      
        1 gccaaatcgt ccggcgtggt cagcgcttta ctgcgcgaca cccgcccgtc gtcatcgacg
       61 gcaaccaaat cggtaaaagt cccacctata tcaactgcga ttctcatgga gcctttcgat
      121 tttttgaagg gcgatcggcc ggtcgcccct acccaccctc gtcctaacct tctgtaatcc
      181 tgtaggggca accccctgtg gttgcccttc cggagggcag gcacgggggc ctgcccctac
      241 aatccatcga atggcggttt gggctgaaat atcgcggcgt agatttcatc cttaccttcg
      301 ctcatccgcc caccagcgac ttcgcgccgc tcgccgtcac ctgaaaacta tcgccgtaaa
      361 gcaccacgcc tatgtccgac tcgatggtca cacgcagcgc caccgtcata ttctcattga
      421 gcgtcgtcgc acccactgtc gcggcgccga cttcatgggc atcgccttga ttcaagaatg
      481 gcgcttccca ttgattgagg ccgattccgt tggcgagacc atagacggcg gctttggcgt
      541 agaactcgcc cagctctttg cgcgcggttt cgtcaattgc agtgacagcg ccattgggcc
      601 gaagctgctt ggccatcgcc gcaacgattt cttgcgctcg ctcataggcc gcctgaatct
      661 tgccatcgct agttagaata aacgtccgcc ccgcctcggc ccagtagcgc tcatgctgca
      721 cggcgagata aagcgcccaa tgggaaccga tgctcgccgc ctgtttgaag ctcggcggat
      781 tgagccgccg gtcgccggcg agaatgcgaa tatcttcagc gcccttgtcc cgcgccaagc
      841 gatcgatgtc ggcgacgatt tcatattcct tgcgcccaga tttaataaac cgcgcggcac
      901 cggcgcagac ttcgctaagc aggctgccgg cttcagacat ggcgccgagc tcgcgcgccg
      961 tcttcgccac acgcaacggc gcgacgatgt catcgcaatc tagccaactg acgttgggca
     1021 gcgcggtttt catatcctcc aactgcggca gcggaaagcc atgaccggaa tcggccaaac
     1081 cgaccttgga tttctcgaag cctttttctt tgatcatctt cgcgccatcg ctaccgacct
     1141 gattggacgc gcgcacgtct tcgacccaag ttaacgtctt ggcgaacggc acatctcggc
     1201 tgccgatatt gagcaacatg gaaatcgcgc catcgcgcgg caccaccgcg atgccgccgc
     1261 gcactttagg aaagtagttg gtcaggtagc aaatatcggc gaaggaataa ttgtcgccgt
     1321 agatcaccac ggcgtcgaga ccgcgccgcg ccatctcctt gcgcacagcg tcaagccgcg
     1381 cctgaaactc gccctgcggc accgccgccg gatcccaagt ggaacaaccg cgcttcaata
     1441 ctgaatgtcg gccaaatatc atagtgtcct catcgtctcc gactcaatcc aacgatttga
     1501 gcgacttgat cgttttgaac gattggaacg agaaggttca agccgttcaa agagttcaat
     1561 acgttcaaaa cgtttaaatt catcggaggc tactctttaa tatggagatc ccaagaagat
     1621 ttcatcaacg actccgcctg gttctttccc atcaccacgg tatcgccaag cgtaagataa
     1681 ccggtctccg gcacatattg attgggatga atgatgaagg tcatgccctc ttccaacttg
     1741 gtcttgttgt catcttccaa actgcccggc gccgacgaac cgcagccgag gccatggccg
     1801 cgcacgcgca tgaacggcgg ccggcaatac tctgcgtagc catattcaat aaacgtcccg
     1861 ttgatcgcct tggccacggc gctcgccggc gcgccggtct gcgccgccgc catgcccaag
     1921 cccatcgctt tgtgcagaat cgcgtacttc tcgcgcacca ccggcggcgg ctctcccaac
     1981 acgacagtgc ggcagatctg cacgaacaga ccgccgatgc atggcgtgat ctcgccgatg
     2041 atgatatcgc ccggctggac gacgcgatcg gtgggcggat ggagcgcttg attgtgatgg
     2101 ttcgccacca ccatgccgaa attatcttcg gcgccgagcg aacgcatctt atattcgacg
     2161 atggcggcga gctcatattc tttcaagccg gggcgcgcgt cttggtgcaa ggcgctgacg
     2221 ccggcatcgg cgatcgccgc cgcgcgccgc atgcgctcca gctcaaacgg acctttgcag
     2281 cgcgccatgg tctcgatgat gtctttggaa ttaaccggcg tctgatccag cgctttgacg
     2341 atctcgtcat gcagcccgac atgcatcgct tcccgaccga tgagtccaac cttgcccgcc
     2401 aacttcgcca agcggtcatg gaagtctagg aaaggccgaa catcgccaac ccacgattct
     2461 tcttgagcgc gcgggatgtc ccacgccggc gccagataga gcaccggcgc atcatcgagc
     2521 ggaacgacca gcatggtatc cggaccgacg ctgatgaagt cggtgagata ggcgacgtaa
     2581 ttcatgcgca aaaaattatg ccgcccggca tcgtgcacca gcaacgtttg cagccctcga
     2641 tcgcgcatgg cttgacgtac ctgggtcatg cgagtttcaa agacttcttg tccgtccata
     2701 gacacctccg ctgcctgttc cgaaaatctt tcctggcccc tcttttttaa agggaaaaga
//
LOCUS       DATIRS010000616         2032 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1422710, whole genome shotgun sequence.
ACCESSION   DATIRS010000616 DATIRS010000000
VERSION     DATIRS010000616.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2032
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1422710"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            131..787
                     /locus_tag="VLM90_07795"
     CDS             131..787
                     /locus_tag="VLM90_07795"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HSQ12904.1"
                     /translation="MKNKDFPPSPRWLGWRLRHAFWASAACAVLAGCATVKPAPKINT
                     YVVLLPEEGGAPTSVIVGEGAHVLTLDPPFSGATVDSEGKIERKSPTAAEADKTFGAA
                     LAAQPPKPISFTLYFDTNSTQVTTASRPQLDALMAEAARRQAVEVQVTGHTDRVGNAA
                     DNDRLSLQRAETMRTMLVQNGIKATFIRAVGRGEREPLVPTADEQPEARNRRVEVLLR
                     "
     gene            complement(875..>2032)
                     /locus_tag="VLM90_07800"
     CDS             complement(875..>2032)
                     /locus_tag="VLM90_07800"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SpoIIE family protein phosphatase"
                     /protein_id="HSQ12905.1"
                     /translation="ATPVGSRMDGVEIHAQVVENILFGARLIRPSVARWWELLGLVTF
                     GIVLIVALHRRRPAIGVALYGAIAATLVIASFIAFQKIHVLYDPTLPAVANGVMVGLL
                     LTAGFSAALRRRRELDAELAVERNERLRAAGELRAAREIQMGMLPDPNSIAGMPATLD
                     FFALLEPAQEVGGDLYDAFMLDERRLFFMIGDVSGKGVPASLFMALTKTLCKSLARRE
                     PSNLGQVLSSVNDEISRENPTAMFVTALIGVIDGTSGELELCNAGHNPAILLRPRDAP
                     RELDRAGGPPLCLDHGFAYPTQRLRLSDGDILLLITDGVTEAEDGGQAQFGLGRTLQC
                     LAKDPPRSAAAVCQMLHTEVKHFTDKAAPSDDLTVLAVGYRKASTGAPSAP"
BASE COUNT          434 a          654 c          593 g          351 t
ORIGIN      
        1 gtcaccgacg tacagcgcgg cacattggcg gtggtctccg ggcagatcgc caaacgctcc
       61 cccgacgcca tgaaagtaaa aaccccgacc actatcctcg gcgtgcgcgg caccaccttc
      121 gcagtcaaag ttgaagaata aagattttcc gccgagcccg cgatggctcg ggtggcgact
      181 gcgtcacgcc ttctgggcga gtgcggcgtg cgccgtactc gcaggctgcg cgacggtcaa
      241 acccgcgccc aagataaaca cctatgtcgt gctgctgccg gaagagggcg gcgcgcccac
      301 gtcagtcatt gtcggtgagg gtgcgcatgt gctgactttg gacccaccgt tcagtggcgc
      361 aactgtcgac agcgagggaa agattgaaag aaaatctccc actgccgcgg aggccgacaa
      421 aaccttcggc gcggcgctgg cggctcagcc acccaaaccg atcagcttca ccctttactt
      481 cgataccaac agtacccagg tcactacggc gtcgcggccg caactcgacg cgctgatggc
      541 ggaagcggcg cgccgccaag ccgtcgaagt tcaagtcacc ggccacaccg accgcgtcgg
      601 caacgctgcc gacaacgacc ggctgtcttt gcagcgcgct gaaacaatgc gcacgatgct
      661 ggtccagaac ggcatcaaag cgacgttcat ccgagccgtc ggccgtggcg aacgggagcc
      721 cctggttccc accgccgacg agcaacccga agcgcgcaac cgccgcgtcg aagttctatt
      781 gcgctaattt cgaacgaatg aataagcctg ccgatggaaa ggactgcgag gcgggctctt
      841 cgtcaggtct cggacttgga tagccagcca atcttcacgg cgcggacggc gctcctgtcg
      901 aagctttgcg atagccaact gccagcacag tcagatcgtc ggacggcgca gctttatcgg
      961 taaagtgctt cacctcggta tgtagcatct gacaaaccgc tgcggcgctc ctcggtggat
     1021 ccttagccaa gcactgaagc gttcgcccta agccaaactg cgcttggccg ccatcctccg
     1081 cttccgttac accgtcggtg atcaatagca aaatatcgcc gtcgcttagc cgcaagcgct
     1141 gcgtcggata ggcgaaccca tgatcgagac acagcggcgg tccgccagcg cgatcgagtt
     1201 cgcgcggcgc gtcccgcgga cgcaagagaa ttgctgggtt gtggccggcg ttgcagagct
     1261 ccaactcacc cgaagtgcca tcgatgactc cgataagggc cgtgacgaac atcgccgtcg
     1321 gattttctcg cgagatttca tcgtttaccg aacttagcac ttggccgagg ttcgatggct
     1381 cgcggcgcgc cagacttttg cacaacgtct tggtcaacgc catgaacaac gatgccggca
     1441 cgcctttgcc ggaaacgtcg ccgatcataa aaaacaatcg ccgctcatcg agcatgaacg
     1501 catcgtatag atcgccgcca acttcctggg ccggctccaa tagcgcaaag aaatcgagag
     1561 tggccggcat tcccgcgatc gaattgggat cgggcaacat gcccatttga atttccctcg
     1621 ccgcacggag ctcgccggcg gcacggaggc gttcgttgcg ctcgaccgcc aattcggcat
     1681 cgagttcccg gcgccgccgc agggccgccg aaaatcccgc cgtgagtagc aggccgacca
     1741 tcactccgtt ggccactgcc ggcagtgtcg gatcgtagag cacatgaatc ttttgaaaag
     1801 cgatgaagct ggcgatcacg agagttgccg ctatggcgcc atacagtgcg acgccgatgg
     1861 ccggtcgacg ccggtgtaga gccacgatca ggacgatgcc gaaggtgacc agcccaagga
     1921 gttcccacca gcgcgccacc gatggccgga tcaagcgggc cccgaaaaga atattctcga
     1981 ccacctgggc atgaatctcc acgccgtcca tgcgtgaacc tacgggcgtt gc
//
LOCUS       DATIRS010000617         1592 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_45443, whole genome shotgun sequence.
ACCESSION   DATIRS010000617 DATIRS010000000
VERSION     DATIRS010000617.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1592)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1592)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1592
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45443"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1006)
                     /locus_tag="VLM90_07805"
     CDS             complement(<1..1006)
                     /locus_tag="VLM90_07805"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012337.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-[acyl-carrier-protein] synthase
                     family protein"
                     /protein_id="HSQ12906.1"
                     /translation="MNSLHKRRELQRVVVTGMGAVSPNGIGVDAYGASLRNGVSGIGP
                     ITSFDAEGLECRVAAEVKNFRTDSFFSAQEARRVGRAVPLLIAATEEALGRAGICSQR
                     LALDEKQSWGVVIGSGGGTPDFTEEQYRLFFSEQFRRVSAYNVSSSTPGSLSSEISLR
                     FGFRGPSHLISTGCTSSTDALGYAFNMIRFGLAEQLVSGGADATITPGIMQGFCVMRV
                     VSASRNQEPESASRPFDRTRDGFVLGEGAWILVLEERQRALTRGATIYAEILGYGSTC
                     DAYHRVRLNPDGAEPARAMTIAIEDANVAKDEIGYVALHGTSTLLNDRTETLAAKTCF
                     G"
     gene            1123..>1592
                     /locus_tag="VLM90_07810"
     CDS             1123..>1592
                     /locus_tag="VLM90_07810"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ12907.1"
                     /translation="MDHKNQVVVITGASNGIGKQLALDLAARGAVVVGCGRSIARLKE
                     TLKEVRRTSPSSIMIGCDVSDAEQVQGMIAKIIADYGKIDVLVNNAGIGMRKPFVETA
                     VETIEEIIRINYLGAVYCAHAALPSMIARGRGHIVNISSIAGLIGTLNMGAYCAS"
BASE COUNT          327 a          499 c          468 g          298 t
ORIGIN      
        1 ggccgaagca agttttcgcc gccagggttt ctgtcctgtc gttcaacaaa gtcgaagtgc
       61 cgtgcagcgc cacatagccg atttcgtcct tggcgacgtt ggcatcttcg atggcgatgg
      121 tcatggcgcg cgccggctcc gcgccgtcgg gattgagccg cacccggtga tacgcgtcac
      181 aagtcgagcc gtaacccaat atctcggcgt aaattgtagc gccccgcgtc agggcgcgct
      241 gtctttcctc aagaaccagg atccacgcgc cctcgccaag cacgaagccg tcgcgcgtcc
      301 ggtcgaacgg ccgggaggcg ctctcgggct cctgattgcg cgacgccgac accacgcgca
      361 tgacgcagaa gccttgcatg atgccgggcg tgatcgtggc gtcggcgccg ccgctcacga
      421 gttgctcggc caagccgaag cgaatcatgt tgaaggcgta acccaaagcg tccgtcgaac
      481 tggtgcagcc cgtggaaatc aggtggctcg gtccgcgaaa accgaaacgg agcgatattt
      541 cactggataa actgcccggc gtcgagctcg aaacgttata ggcgctgacg cggcggaact
      601 gctcggaaaa aaacagccgg tattgctcct cggtgaaatc cggcgtgccg ccgccgctgc
      661 cgatgaccac gccccaggat tgcttttcat cgagggccaa tctctgcgag caaatgcccg
      721 cccgtcccaa ggcttcttcc gttgcggcga tgagcagcgg cacggcacgg ccgacgcgcc
      781 gcgcttcttg cgcgctaaag aaactatccg tccggaagtt tttgacctcc gccgcgacgc
      841 ggcattcgag gccttcggcg tcaaatgagg taatcggtcc aatgccgctc acgccgttac
      901 gcagggacgc gccataggcg tcaacgccga tcccgttggg tgagacagcg cccatccccg
      961 tgacgacgac ccgctgcaat tcacggcgtt tgtggagcga attcatcttg actcttcagg
     1021 gtggaaatag tttcattctg aagcataaca ctcgcgcgca gacccggaaa gcgccgccta
     1081 aagaaagcca aacgacaatc cggctcattg atcaagtgct ccatggacca taaaaaccaa
     1141 gttgttgtga tcaccggcgc ttcgaacggc atcggcaagc aattagccct tgacctggcg
     1201 gctcgtggcg cagtcgtcgt cggttgcggc cgttcgattg cgcgtctcaa agaaaccctg
     1261 aaggaagtgc gccggacgag tccgtcgtcg atcatgatcg gttgcgacgt gagcgacgcg
     1321 gagcaggtgc aaggcatgat cgccaagatc atcgccgact acggcaagat cgatgtcctc
     1381 gtcaacaacg cgggcatcgg catgcgaaag ccgttcgtcg agacagctgt ggaaaccatc
     1441 gaggaaatca tccggatcaa ttatctcggc gcggtctact gtgctcacgc agccctgccg
     1501 tcgatgatcg cccgcggccg cggccacatc gtaaacattt cttccattgc cggcttgatc
     1561 ggcaccctca acatgggcgc ctactgcgct tc
//
LOCUS       DATIRS010000618         1714 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1422894, whole genome shotgun sequence.
ACCESSION   DATIRS010000618 DATIRS010000000
VERSION     DATIRS010000618.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1714
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1422894"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..456
                     /locus_tag="VLM90_07815"
     CDS             <1..456
                     /locus_tag="VLM90_07815"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSQ12908.1"
                     /translation="AGLTVLDNVIVGALHRTATVAMARSHAEEILAKLGLESKRDLPA
                     AALTLPDRKRLEIARALATKPKLLLLDEAMAGLRPTECDQMVAVLREINQREGITLLL
                     IEHVMRAVMALAEKVIVLHHGEIIGQGTPGDVVRQPAVVASYLGESSEL"
     gene            453..1166
                     /locus_tag="VLM90_07820"
     CDS             453..1166
                     /locus_tag="VLM90_07820"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ12909.1"
                     /translation="MNVLLEVTDLSLNYGAAAALAGVSLEIYKGEMVALIGANGAGKS
                     SFIRAIAGIERPITGSIVFAGCAIAALESHQICDLGIGQVAEGRQLFATLTVLENLQM
                     GAMPARARARSKRSLDEVFRLFPSLAERRKQLAGTLSGGEQQMLAIGRCLMGCPELIM
                     LDEPSLGLAPNLVQEMLLAIRQLNHNGLTVLLVEQNVAASLKICRRGYVLENGRIVMT
                     GSGDELLNDDGVRQAYLGL"
     gene            1354..>1714
                     /locus_tag="VLM90_07825"
     CDS             1354..>1714
                     /locus_tag="VLM90_07825"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSQ12910.1"
                     /translation="MADTNIKKSGERWQSDIIVDLIKQFDFPYIALNPGASYRGLHDS
                     LVNYGENKPEMLLCNHEKIAVQIAHGYAKATGKPMIAIVHNVVGLLHAPMGIYYAYID
                     RSPVFIIGATGPMDEKLR"
BASE COUNT          369 a          523 c          490 g          332 t
ORIGIN      
        1 gccggtctca cagtgctcga taacgtcatc gtcggcgcgc tgcatcgaac tgcgaccgta
       61 gcgatggcgc ggtcgcacgc ggaagaaatt ctcgccaaac tcggcttgga atcgaagcgc
      121 gatctgcccg ccgcagcgct cacactgccg gaccgaaaac ggctcgaaat cgcgcgcgca
      181 ttagcgacca agccgaaact cttgctactt gacgaagcga tggccggcct gcgccccacc
      241 gagtgcgacc agatggtcgc ggtgttgcgc gaaatcaacc agcgcgaagg tattacgctc
      301 ctcttgatcg agcatgtcat gcgcgccgtg atggctttgg ccgagaaagt gatcgtgctg
      361 caccatggcg agatcatcgg ccaaggaaca ccgggcgacg tcgtgcgcca gcccgcggtg
      421 gtggcgagct acttgggcga gagcagcgag ttatgaacgt cttgctggaa gtgacagacc
      481 tctccctgaa ctacggcgcc gccgcggctc tcgccggcgt ctcgctggaa atttacaaag
      541 gcgagatggt cgcgctgatc ggcgccaacg gcgccggtaa atcgtcgttc attcgtgcca
      601 tcgcgggcat cgagcggccg atcaccggca gcattgtttt tgccggctgc gctatcgccg
      661 cgctcgagtc tcatcagatt tgcgatctgg gcatcggcca ggtcgccgag gggcgccagc
      721 tctttgccac gttgacggtt ctggaaaatt tgcaaatggg cgcgatgccg gcgcgcgccc
      781 gcgcgcgaag caagcgatcg ctggacgaag ttttccgact ctttcccagc ctagctgaaa
      841 ggcggaagca acttgccggc acgttatcag gtggcgagca acagatgctc gccatcggcc
      901 gttgcctgat gggctgcccg gaactcatca tgctcgacga accctccctc ggcctggcgc
      961 ccaacctcgt tcaggaaatg ctcctagcca ttcgccagtt gaatcacaac ggcctgacgg
     1021 tgctcctggt cgaacaaaac gtcgccgcgt ctttaaagat ttgccgacgc ggctatgtgc
     1081 tggagaatgg ccgcatcgtc atgaccggca gcggggatga acttctgaac gacgatggcg
     1141 tacgccaggc gtatctcggg ttatagaact cccgactccg ctcaagtttc agtggtatcc
     1201 ctctgacctt gaacctttga accgttgaac cttgcacagc gggcacttcg tgccccgcag
     1261 cccttgccag cgaacgaatt cccagataac aagggagatc gtaaaaatct cacaagtcgg
     1321 ctaagcacgg gagaatttta ggaggataac gccatggcag ataccaacat caaaaaatcc
     1381 ggcgaacgtt ggcagtcgga catcattgtc gacctaatca aacaattcga cttcccttat
     1441 atcgcgctca atcccggcgc cagctaccgc ggtctgcatg actcgctggt caactacggc
     1501 gagaacaaac cggaaatgct cctgtgcaac catgagaaga tcgccgtgca gatcgcccat
     1561 ggctatgcca aggccaccgg caaaccgatg atcgcgattg tccataatgt cgtcgggctg
     1621 ttgcatgcgc ccatgggcat ctactacgcc tacatcgacc gctcgccggt atttatcatc
     1681 ggagccaccg gtccgatgga cgaaaaattg cgcc
//
LOCUS       DATIRS010000619         4314 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1619469, whole genome shotgun sequence.
ACCESSION   DATIRS010000619 DATIRS010000000
VERSION     DATIRS010000619.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4314)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4314)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4314
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1619469"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1214)
                     /locus_tag="VLM90_07830"
     CDS             complement(<1..1214)
                     /locus_tag="VLM90_07830"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HSQ12911.1"
                     /translation="MPTWIGAQLLENQRCRFRVWAPTARSVDVTIIGKKGRAAPLGRG
                     ADGYFAAELEDILSGTLYRYRLNGAQDRPDPASRFQPQGVHGPSAVIDANFPWEDASW
                     LGLPLSRYVIYELHVGTFTSAGTFDAIVAHLAELKDLGITAIELMPVHQFVHEGWLLS
                     RGLRNYWGYNSIGYFAPHNEYSSRGGSGEQVREFREMVKAFHSAGIEVILDVVYNHTA
                     EGNHLGPTFSFKGIDNLAYYRVVKDTPAYYFDYTGTGNSLNVRHPHVLQLIMDSLRYW
                     VLDLHVDGFRFDLASTLARELHEVDRLSSFFDIMQQDPVVSRVKLIAEPWDVGEGGYQ
                     VGNFPSLWSEWNGKYRDCVRDYWRGEDQTLAEFASRFTGSSDLYAADGRRPYASVNFV
                     TAHDGFTLRDLVS"
     gene            complement(1441..3366)
                     /gene="glgB"
                     /locus_tag="VLM90_07835"
     CDS             complement(1441..3366)
                     /gene="glgB"
                     /locus_tag="VLM90_07835"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: protein motif:HMM:NF008967.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003844 - 1,4-alpha-glucan branching
                     enzyme activity [Evidence IEA];
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0043169 - cation binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching protein GlgB"
                     /protein_id="HSQ12912.1"
                     /translation="MAMESLSLLSDQDLFLFNEGSHFRLYDKLGAHVVARGSAAGGDF
                     ESGTYFAVWAPNANHVSVIGEFNGWEKGSDSLQPKGDSGIWEGFLPNIGKGTLYKYHI
                     GSRFNGYSADKADPFSIFNEIPPKFASIVWDLDYQWKDQQWMGDRQHHQGLDKPMSIY
                     EMHIGSWRRMAGEAHRSLSYRELAIELADYLHHMGYTHVEFMPVMDHPFFGSWGYQVT
                     GYFAPSANYGTPQDLMLLIDALHQRGIGVILDWVPSHFPSDEHGLAYFDGTHLYEHAD
                     PRQGYHPEWHSYIFNCGRNEVQSFLISNALFWLDQYHADGLRVDAVASMLYLDYARKA
                     GEWIPNKYGGRENIEAVEFLRRLNAAVYEHHPEVETIAEESTSWPMVSRPNYLGGLGF
                     GLKWDMGWMHDTLEYMRQDPVHRRYHHNKLTFRMLYAFQENFVLPLSHDEVVYGKGSL
                     LGKMPGDDWQKFANLRALFGYMYAQPSKKLLFMGGEFGQWSEWTHDGSLQWELLDQPL
                     HAGLQKWVRELNHLYKNEPALYEQDCDPAGFEWIDCGDAEASVISLMRKGKTTSTIIL
                     FICNFTPVPRYSYRVGAPRGGSWHEALNSDAAVYGGSNMGNLGGVEAAPVALHGRSHS
                     LTITLPPLSASFFKSEG"
     gene            complement(3418..>4314)
                     /locus_tag="VLM90_07840"
     CDS             complement(3418..>4314)
                     /locus_tag="VLM90_07840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12913.1"
                     /translation="NLGHFFDGILTRPKDAAAAAQPAQPLIELAERELPELAHELIGS
                     YLESAHLLGQRTGELHVALASDSKSPAFAPEPFTALYRRSLYQSMRTSADQSLTLLSE
                     RLRGLAEPVRGSAEKVVKLETAIFERFRQISEAKITATRIRCHGDYHLGQVLFTGKDF
                     VIIDFEGEPARPMTERRIKRSPLRDVAGMLRSFDYAAVSKLKSDQVRPDDLARLHPWA
                     RFWNRWVSVSFLKGYLDATRQAAFLPKSASELRVMLDVYLLEKAVYELGYELNNRPDW
                     VIVPITGILALVERSESAQRDN"
BASE COUNT          899 a         1303 c         1246 g          866 t
ORIGIN      
        1 gagacgaggt cccgcagcgt gaagccgtca tgggccgtca caaagttcac gctggcgtac
       61 ggccggcgcc cgtcagccgc atacagatcc gaacttccgg tgaagcgtga cgcgaattct
      121 gcaagcgtct gatcctcacc ccgccagtag tcccgcacac agtctcggta cttgccgttc
      181 cactcggacc agagcgaagg gaagttccca acctgatacc cgccttcgcc gacatcccac
      241 ggctcggcaa tcagcttcac gcggctgacg acgggatcct gctgcatgat gtcgaagaac
      301 gaggacagtc gatccacttc atggagttct cgcgcaagcg ttgaggccag gtcgaaccgg
      361 aacccatcga catggaggtc caacacccag tagcgaagcg agtccatgat gagctgcaag
      421 acgtgtggat gccgcacatt cagactgttg cccgtgccgg tgtagtcgaa gtagtacgcc
      481 ggcgtgtctt tgacgacgcg gtagtacgcg aggttgtcga ttcctttgaa cgagaacgtc
      541 ggcccgagat ggttgccttc tgccgtgtgg ttgtacacga catcgagaat gacttcgatg
      601 cccgcagaat gaaacgcctt gaccatctcg cgaaattccc gcacctgctc gcccgaaccc
      661 ccacggctcg agtactcgtt gtgcggcgca aagtacccga tggagttgta cccccagtag
      721 ttccgcagac cgcgcgagag cagccacccc tcatggacga attgatgcac tggcatcagt
      781 tcgattgccg tgatgccgag gtctttgagc tcggcgagat gcgccacgat ggcatcgaac
      841 gtgccggcgc tagtgaaagt gccgacgtgc agttcgtaaa taacgtagcg tgacagcggc
      901 aaacccaacc aggaggcgtc ttcccaggga aaattcgcgt caatcaccgc agaggggccg
      961 tgaacgccct gaggttggaa ccgtgaagcc ggatcgggcc ggtcttgcgc gccgttaagc
     1021 cggtaacgat aaagcgtgcc gctcaggata tcctcaagct ccgcggcgaa gtatccgtcc
     1081 gcgccacggc caagtggcgc ggcgcgccct ttcttgccga ttatagtaac atcgacggag
     1141 cgagccgtcg gcgcccagac gcgaaagcgg cagcgctggt tctctaacaa ttgtgcgcca
     1201 atccaggtcg gcaattttag cctcactccc gatcgctcgt ggtccaacgg tttttcgccg
     1261 cggcgcgcgg atcatcgtaa tcccgtctcc agcggacgga taccgctcgc ggtcgttttc
     1321 gcggtggtag ccgatctcgg gtgccggagc caaggcgtta aaattgtcga tgatggcgtt
     1381 tttgccgcgg ccgccgcggt ggcagtaact tcctgaattt tttggcggcg ccgtcaaggc
     1441 tcaaccctcg ctcttgaaaa acgacgccga caacggcggt agcgtgatcg tcaaggaatg
     1501 ggatcggccg tgcagcgcga cgggcgccgc ttcgaccccg ccgaggttgc ccatgttgct
     1561 gccgccatac accgccgcat cgctgttcaa ggcttcgtgc caagagccgc cgcgcggcgc
     1621 gccgacccgg taactgtagc gcggcaccgg ggtgaaatta caaatgaaca gaataatcgt
     1681 cgaggtggtt ttgcccttgc gcatgagact gatcacgctt gcctcggcgt cgccgcaatc
     1741 gatccattcg aaaccggcgg gatcgcaatc ctgttcgtag agcgccggct cgttcttgta
     1801 cagatgattg agctcgcgca cccatttttg taatccggcg tgcaacggct gatcgagcag
     1861 ctcccactgc aagctcccgt catgcgtcca ttcgctccac tggccgaatt cgccgcccat
     1921 gaacagcaat tttttagacg gctgggcgta catgtagccg aagagcgcgc gcaggttggc
     1981 gaacttctgc cagtcgtcgc cgggcatctt gccgagcaac gaacctttgc cgtacacgac
     2041 ttcgtcatgg gacagcggca ggacgaaatt ttcctgaaaa gcatagagca tgcgaaaggt
     2101 cagcttgttg tgatggtagc gccgatgcac cggatcctgg cgcatgtatt ctaacgtatc
     2161 gtgcatccag cccatgtccc acttgagtcc gaagcccaag ccaccgagat aattgggccg
     2221 cgataccatc ggccacgagg tcgattcctc ggcgatggtt tcaacctcgg ggtgatgctc
     2281 ataaaccgcc gcgttcaagc gccgcaaaaa ctcgaccgct tcgatgtttt ccctgccgcc
     2341 gtacttgttg ggaatccatt cgcctgcttt gcgcgcatag tcgagataga gcatcgatgc
     2401 caccgcgtcg acgcgcaaac catcggcatg gtactggtcg agccagaaca gcgcgttgct
     2461 gatcaaaaaa ctctgcacct cgttgcggcc acagttaaag atgtaactat gccattccgg
     2521 gtgatacccc tggcgcgggt cggcatgttc gtaaagatgc gtgccgtcga aatacgccag
     2581 gccatgttcg tcgctcggga aatgcgacgg cacccagtcg agaatcacgc cgatgccgcg
     2641 ctggtgcagc gcgtcgatga gcagcatgag atcctgcggc gtgccataat tagccgatgg
     2701 cgcgaagtaa ccggtgactt gataacccca ggaaccgaaa aacggatgat ccatgaccgg
     2761 cataaactcg acatgggtgt agcccatgtg atgcaggtaa tccgccagct cgatcgccaa
     2821 ctcgcgatag gacagcgagc ggtgagcttc ccccgccatc cgtcgccagg aaccgatgtg
     2881 catttcgtaa atcgacatcg gcttgtcgag gccctgatgg tgctgccggt cacccatcca
     2941 ctgctggtcc ttccattgat aatccaaatc ccagacgatg gacgcgaact tcggcggaat
     3001 ctcgttgaag atagagaacg gatcggcctt gtcggcgctg tagccgttga agcgcgagcc
     3061 gatgtgatac ttgtacagcg tccctttgcc gatgttggga agaaatcctt cccagatgcc
     3121 ggaatcgccc ttcggttgca aggaatcgct gcctttctcc caaccgttaa actcgccgat
     3181 gacgctgaca tgattggcgt tgggcgccca taccgcgaaa taggtgccgc tctcgaagtc
     3241 gccgccggcg gcgcttcccc gcgcgaccac atgggcgccg agtttgtcgt acagacgaaa
     3301 atgactgccc tcgttgaaga gaaacagatc ttgatcggat agaagactta aagattccat
     3361 agccatgctt cgctctcact tcctcacttg ttaggcaggc cgcgcagatc ggttttttta
     3421 gttatcacgt tgcgctgact cacttcgctc gaccaatgcc aagatccccg tgatcggcac
     3481 gatcacccaa tcgggacggt tatttaattc atagcccaat tcgtacaccg ctttctcgag
     3541 cagatagaca tcgagcatca ctcttagctc gctggcggat ttcggcagaa aggccgcctg
     3601 gcgggtcgcg tcgagataac cctttaaaaa actaaccgac acccagcggt tccagaagcg
     3661 cgcccaagga tgcagtcgag cgagatcatc cggccggacc tggtcgcttt tgagcttgct
     3721 gactgccgcg taatcgaagg atcgcagcat ccccgcgaca tcgcgcagcg gcgagcgctt
     3781 gatccgccgc tcggtcatcg gccgcgccgg ttcgccctcg aagtcgatga tgacaaaatc
     3841 cttaccggta aaaagcacct ggccgagatg ataatcgccg tggcagcgaa tgcgcgtggc
     3901 ggtgatcttg gcttcggaga tttggcgaaa gcgctcgaag atggcggttt ccagcttcac
     3961 gactttttcc gcgctgccgc gaaccggttc ggccaatccc ctcagccgct cgcttaacag
     4021 cgtcagcgat tggtccgccg aggtgcgcat gctctggtag agcgagcggc ggtaaagcgc
     4081 cgtaaagggt tccggcgcga acgccgggct tttactgtcc gaggcgaggg caacgtgcaa
     4141 ttccccagta cgctggccga gcaaatgagc cgactccaga tatgacccga tgagttcgtg
     4201 cgccaactcc ggcagctccc gctccgccaa ctcgatcagc ggctgcgccg gctgcgccgc
     4261 ggctgcggcg tctttcggac gggtaagaat gccgtcgaag aaatggccca ggtt
//
LOCUS       DATIRS010000620         1827 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_636386, whole genome shotgun sequence.
ACCESSION   DATIRS010000620 DATIRS010000000
VERSION     DATIRS010000620.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1827
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_636386"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1827
                     /gene="mdoH"
                     /locus_tag="VLM90_07845"
     CDS             <1..>1827
                     /gene="mdoH"
                     /locus_tag="VLM90_07845"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF003958.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glucans biosynthesis glucosyltransferase MdoH"
                     /protein_id="HSQ12914.1"
                     /translation="IQIGWRRAAKHRRIVLALVVLAQTVLASWSLARTFSSPELSALQ
                     VAIIVNFSILFSWISFSFWSNVAGFWTLWRGGPVCPLAEEAGRCADQPLHTHTAVLMP
                     ICNEDVSRCLAAIEAIYLSLAQTGELDHFEFFLLSDSSDAERQVEEEIAWAKTCRDVD
                     GFTRIFYRHRRNNVKRKSGNIADFLRRWGVNYDHMVVLDADSVMSGENLVQLARLMER
                     HPKVGVIQTVPTIVNGQSLFARAQQFASRCYGSLFSASLHFWQLGESYYWGHNAIIRV
                     APFVKHCGLARLFGKPPLGGEILSHDFVEAALIGRAGWEVWLARGLTGSYEESPPSLL
                     DELKRDRRWCQGNLQHLRLWFGNGIKAGHRAILIMGVMAYASALLWLSFLFLNTVELI
                     VQSVTTPVYFSPHPRLFPIWPEWHPEWALALVGTTALLLLLPKLLSFLLILKNRETRL
                     YGGLVSLCASIAAEILLSTLMAPIRMWFHSKFVLLTLLGRPIRWTTQCRTESATDWRA
                     AINAHGFSAFLAGAWVVVMSWINPAVLLWMLPICLALALSVPLSVYLSRPSLGQAVKR
                     WRLFQIPEESYPPPVVAATQTSFERRRGQDFSGGGFLYTVMDS"
BASE COUNT          322 a          502 c          531 g          472 t
ORIGIN      
        1 aattcagatc ggctggcggc gcgcggcaaa acaccggcgc attgtcctcg cactcgtcgt
       61 gctcgcgcag accgtgcttg cgagttggtc cttggcgcga accttctcca gccccgagtt
      121 gagcgcctta caggttgcca tcatcgtcaa cttttctatt ctgttttcct ggatttcttt
      181 ttccttctgg agcaacgttg ccggtttctg gacgctctgg cgcggcggtc ccgtttgccc
      241 cttggctgaa gaggccggac gctgtgccga tcagcccttg catacccata cggcggtgct
      301 gatgccgatt tgcaatgaag atgtcagtcg ctgcctggcg gcgatcgaag cgatatattt
      361 atcgcttgcc cagaccggtg agctggatca tttcgagttt tttctcttga gcgattccag
      421 cgacgcggag cggcaagtcg aggaagaaat cgcctgggcc aagacctgtc gcgacgtcga
      481 tggattcacc cgaatatttt atcgccaccg gcgcaacaac gttaagcgca agagtggcaa
      541 catagccgat ttcctacggc gctggggagt gaattacgac catatggttg tgttggacgc
      601 cgatagcgtg atgtccggcg aaaacctcgt gcagctggct cgcttgatgg agcgtcatcc
      661 aaaagttggc gttatccaaa cggtgccgac catcgtcaac ggccagtcgt tgttcgcgcg
      721 cgcgcaacag ttcgccagtc gttgctatgg ctctttgttc agcgccagtc tgcatttctg
      781 gcaacttggt gagagttatt attggggcca taacgcgatt attcgggtcg caccgttcgt
      841 gaaacattgc ggattggcgc gactgttcgg caaaccgccg ttgggcggag aaatcctgag
      901 ccatgatttt gtcgaggccg ccttaatcgg tcgcgccggt tgggaagtgt ggcttgctcg
      961 tggtttgacc ggcagttatg aagaatcacc gccgagcctt ttggacgagc tcaagcgcga
     1021 ccggcgctgg tgccagggaa acttgcagca tctgcggctc tggttcggta acggcatcaa
     1081 agccggccat cgcgcgattc tcatcatggg cgtcatggcc tatgcatcgg cgctgttgtg
     1141 gctgagtttc ttgtttctca acaccgtcga attgatcgtg cagtcggtga ctacgccggt
     1201 ctatttttca ccgcatccga ggctgtttcc aatttggcct gagtggcatc cagaatgggc
     1261 tctcgctttg gtcggcacca ccgcgctatt gttgttgttg cccaagctcc tgagtttttt
     1321 attgattcta aaaaaccgtg aaacgcggct ctacggcggt ttggtttctc tctgcgcgag
     1381 tatcgctgcg gaaatcttgc tgtcgaccct aatggcgccg atccgcatgt ggtttcacag
     1441 taaatttgtc ttgctgacgt tactgggccg gccgatccgt tggactacgc aatgccgcac
     1501 ggaaagtgcc accgattggc gcgcagcgat caacgcccac ggattttcgg cattcctagc
     1561 cggcgcttgg gttgtggtga tgtcctggat caatcccgcg gtgctcttgt ggatgctgcc
     1621 gatttgcctg gcgctcgcct tgtcggtgcc gctttctgtg tatctaagcc ggccgtcgct
     1681 tggccaagcc gtcaagcgat ggcgtttgtt tcagattccc gaagagagtt atccgccgcc
     1741 cgtagttgcc gcaacacaaa caagctttga gcggcgtcgc ggccaagact tttccggcgg
     1801 cggcttctta tacaccgtga tggattc
//
LOCUS       DATIRS010000621         1816 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1324476, whole genome shotgun sequence.
ACCESSION   DATIRS010000621 DATIRS010000000
VERSION     DATIRS010000621.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1324476"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..227)
                     /locus_tag="VLM90_07850"
     CDS             complement(<1..227)
                     /locus_tag="VLM90_07850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12915.1"
                     /translation="MAADDIKKKARSDLREKAVRQITRLAQAPGSLLDAGVSELVHEL
                     QVHQIELEMQNEELQRSQSQLAAAKNKYFDL"
     gene            complement(237..>1816)
                     /locus_tag="VLM90_07855"
     CDS             complement(237..>1816)
                     /locus_tag="VLM90_07855"
                     /inference="COORDINATES: protein motif:HMM:NF024983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HSQ12916.1"
                     /translation="GGILFLGSSESIDRHADLFSPIDKKSKLFKRRPSAVAAATVEFP
                     SARPQLKRGSLMSVTANPPARKNPLSEVTQKLLARVANAAPPCVFIDANNEIFFAHGK
                     TGKYLEIAQGHAHLNILEMAWQEIRHPLAVAIRKARAQAKRIGGGAVRLKVNGGNQEI
                     ALTVAPVPEVGEKGELLMVTFEDIAAKPVKVGKGRNVFSATASQRIAQLEQELNYGRQ
                     DLQASIEELQISNEELKSSNEELQSTNEELQSANEELETSKEEMQSLNEELVSVNAEL
                     HEKFAELAGANNDMQNFLDSTKIATVFLDRQLSIKRFTAAASSIVNLIPSDVGRPFHH
                     IASKLEEDNLSADAAQVLDSLVARERQVRSTDGRWYLCRTIPYRTQDNEIDGVVMTLT
                     DMTDLKLAESAAAAKNLAEGIVDTVREPLVALDGELKVIAANGAFYRLFHADIGTTIT
                     QSFFELGNRQWDIPALRELLEKVLPQNSQVDDFVVEHDFPKIGRKKMIVNARRIFRAG
                     VGTETILLAINEAIPNN"
BASE COUNT          318 a          531 c          526 g          441 t
ORIGIN      
        1 tagagatcga agtatttgtt tttcgccgcc gccagttggg actggctgcg ttgcagttcc
       61 tcgttctgca tctccagttc gatctgatgc acttgaagtt catgaaccag ttcggaaacc
      121 ccggcgtcca ggagcgagcc cggtgcttgc gctagccggg tgatttgtcg cacggccttt
      181 tcgcgcagat cgctgcgggc ttttttcttg atgtcgtccg cggccatttt cacacctcaa
      241 ttgtttggaa tggcttcgtt gatcgccaaa aggatggtct cggtgccaac gccggcgcga
      301 aaaatgcgcc gcgcgttgac gatcattttt tttcggccaa tttttggaaa gtcatgctcg
      361 acgacgaaat cgtcgacctg gctattttgc ggcaagacct tttccaacaa ctcgcgcagt
      421 gcgggaatgt cccactggcg gttgcccagc tcaaaaaaag attgtgtgat ggtcgtgccg
      481 atgtccgcat gaaacagccg ataaaatgcg ccgttggcgg cgatcacttt gagctcgcca
      541 tcgagcgcca ccagcggctc gcgcaccgtg tcgacgatgc cctcggcgag atttttcgcc
      601 gccgccgcgg attcggcgag cttcagatcg gtcatgtcgg tcaacgtcat gaccacgccg
      661 tcgatctcgt tatcctgggt ccggtagggg atcgtccggc acagatacca gcgcccatcc
      721 gtgcttctta cttgtctttc cctggccacc aaggagtcca agacctgcgc cgcgtcggcg
      781 gataaattat cctcctccag cttgctggcg atgtgatgga acggccggcc gacgtcgctt
      841 gggatcaagt tgacaatgct gctcgccgcg gcggtgaaac gcttgatcga aagctggcgg
      901 tcgagaaaca ccgtggcgat tttcgtgcta tcgagaaagt tctgcatgtc gttgttggcg
      961 ccggccagct cggcgaattt ctcatgcagc tcggcgttga ccgagaccag ctcttcgttc
     1021 aaagactgca tctcctcttt tgaggtctcc agttcctcgt tggcgctctg cagctcctcg
     1081 ttagtcgact gcaactcttc attcgacgat ttcagctctt cgttggagat ttgcaactcc
     1141 tcgatgctgg cctgcaagtc ttgccggcca tagttcaact cctgctcgag ctgggcgatg
     1201 cgttggcttg ccgtggcgct aaacacgttc cggcccttgc caactttcac tggcttggca
     1261 gcgatatcct cgaaggtcac catcagcagc tcgcccttct cgccgacctc gggcacgggc
     1321 gcgacggtca aggcgatctc ttggttgccg ccattgacct tgagccggac cgcgccgccg
     1381 ccaatccgct tggcttgcgc tcgcgccttg cggatcgcga ccgccaatgg atggcggatt
     1441 tcctgccacg ccatttcgag gatgttgaga tgggcgtgtc cttgggcgat ttcaagatat
     1501 ttcccggttt tgccgtgggc aaagaaaatc tcattgttgg catcgataaa cacacagggc
     1561 ggcgcggcgt tggcgacccg cgccaagagc ttttgcgtga cttcagagag cgggtttttt
     1621 cgcgccggcg ggttggcggt tacagacatg agactacctc gtttcagttg cggccgcgcc
     1681 gagggaaact ctaccgtcgc ggcggccacc gcgctcggcc ggcgtttgaa gagcttcgat
     1741 tttttgtcga tgggcgagaa cagatcggcg tgccggtcga tactctcgga cgagcccagg
     1801 aataaaatcc cgccgg
//
LOCUS       DATIRS010000622         2244 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_833295, whole genome shotgun sequence.
ACCESSION   DATIRS010000622 DATIRS010000000
VERSION     DATIRS010000622.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2244)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2244)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2244
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_833295"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2244
                     /locus_tag="VLM90_07860"
     CDS             <1..>2244
                     /locus_tag="VLM90_07860"
                     /inference="COORDINATES: protein motif:HMM:NF013508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SBBP repeat-containing protein"
                     /protein_id="HSQ12917.1"
                     /translation="LVAGSQAAAVVSASGSIAPVAAARWALQIEFVDADPAVRPSGEN
                     PSTALMSYFKGRPEEWQPAVNTFSRLVYSDLWPGIDLVFTGGANQLKYLFVVKPGADP
                     STIKLRYRGANSVAINRAGQLEVRTPLGDLKDDKPTAYQERSSELADVAVAYDLQSSA
                     AGESHQYGFKLAAYDRSIPLIIDPAVFVYAGFIGGSGDDRGNAIAVDSEGNAYITGET
                     NSLEATFPEVVGPDRTFNGTVDAFVAKVNAAGTALIYAGFLGGTGNDRGKAIAVDSAG
                     NAYISGDTTSTQSSFPVTVGPDLTQNGGTDAFVAKVNGSGTALSYAGFIGGSGSDQGN
                     AIAVDSSNRAYVAGATNSLGTSFPDGDGFGALASFDSTESGILDGFVVRVTANGTALE
                     YAGYIGGSGIDQVLGIAVDGAAAAYVTGDTNSSAATFPITGALDAVHNGGVDAFVAKV
                     NPTGTALIYAGFLGGVGDDQGKSIAILPGCALNCEAYVAGETNSTEASFPVTVGPDLT
                     HNGGIDGFVAKVNASGASLVYAGYVGGNSTDRANGIAVDSSGIAHIVGESDSTQVTFP
                     NGNGFGLLTSSDNTHNGVIDGFVAGVDAAGTALLYASYIGGAGIDRGKGIAVDDAGDI
                     YVTGESEANSVAFPIGGGTGPLATIDNSRNGGVDAFAIKICVTVCHDLQVTQVDSPDP
                     VRVGDNLTYTVTVTNNGPDAAANVVLTDLLPATVTLVSATPSSGACSGTTTVTCALGN
                     LADGASG"
BASE COUNT          440 a          618 c          693 g          493 t
ORIGIN      
        1 ggctagttgc cggatcacaa gctgccgcgg ttgtcagtgc gagcggtagt attgctcccg
       61 ttgccgcggc gcgatgggcg ctgcagatcg agtttgtcga tgccgatccc gccgtccggc
      121 ccagcggcga aaatccctca acggcattga tgagttattt caagggccgt ccggaggaat
      181 ggcagccggc cgtaaacacc ttctcacggt tggtttactc cgatttgtgg cccggcatcg
      241 atctggtttt taccggcggc gccaaccagc tgaaatatct ttttgtggtt aagccgggag
      301 cggatccctc aactatcaaa ctgcgctacc gaggcgccaa ttccgtggcg ataaaccgtg
      361 ccggccagct ggaagtgcgc acgcctttgg gcgatctcaa agatgacaag cctaccgcct
      421 accaggaacg gagttcggaa cttgccgatg ttgccgtcgc gtacgatttg caatcgagcg
      481 cggctggcga atcgcaccag tatggtttta agctcgccgc ctatgatcgc tcgattccct
      541 taatcatcga tccggcggtg tttgtctatg caggatttat cggcggcagc ggggacgatc
      601 gcggcaacgc gattgccgtg gacagtgagg gcaatgctta catcactggc gaaaccaatt
      661 cgctcgaagc gacatttccc gaggtcgtgg gtcctgaccg aactttcaac gggacggtcg
      721 acgcatttgt cgctaaggtg aacgccgcgg ggacggcctt gatctacgcg ggatttctcg
      781 gcggcacagg taacgaccgg ggcaaagcca tcgccgtgga tagcgcgggg aatgcctata
      841 tcagcggcga tacgacctcc actcagagca gtttccccgt gaccgtcggt cctgacctaa
      901 cacagaatgg cgggaccgat gcgtttgtcg ccaaggtgaa tggctccggc accgcgttgt
      961 cctacgccgg ctttatcggt ggtagcggca gcgatcaggg caacgccatc gcggtggata
     1021 gttcgaaccg ggcttatgtc gccggggcga ctaactccct gggcacctcg tttccggacg
     1081 gggacggttt tggcgcgctg gcgtcctttg atagtaccga aagcggcata ctcgatggct
     1141 ttgttgtcag ggtgacggct aatggtacag cattggaata cgccggttac atcggtggat
     1201 ccggcatcga tcaagtcttg ggaatcgctg tggatggcgc ggcagcggcc tatgtcaccg
     1261 gcgataccaa ttccagcgca gcgacctttc caatcaccgg cgctctcgac gccgtgcaca
     1321 acggtggcgt cgatgcgttt gtggcaaaag ttaatccgac gggtacggcg ttaatttatg
     1381 caggctttct tggcggtgtc ggcgatgatc aaggtaaaag catcgccatc ctgccaggct
     1441 gtgcgctcaa ctgcgaggct tatgttgccg gcgaaaccaa ttcgaccgaa gcttcgtttc
     1501 ccgtgaccgt cggtccggat ttaactcata atggcggcat tgatggcttt gtcgcgaagg
     1561 taaacgcctc tggcgcgtcg ctcgtttacg cgggttacgt cggtggaaac agcacagatc
     1621 gggcaaacgg tatcgcggtt gactcaagcg gcatcgctca tatcgtcggt gagagcgatt
     1681 ccacccaagt aacgtttccc aatggcaacg gttttggttt gcttacgtcc agtgacaata
     1741 cccacaacgg cgttatcgac ggctttgtcg caggagtgga cgcggccgga acggctttgc
     1801 tctacgcgag ttacattggc ggcgctggta tcgatcgcgg caaaggcatc gccgtcgatg
     1861 acgccggcga tatttatgtg accggggaaa gcgaggcgaa ttccgtggct tttcccatcg
     1921 gtggcggtac aggtccgctg gcgactattg ataatagtcg caacggcgga gtcgatgctt
     1981 tcgcgattaa aatctgcgtc acggtttgtc acgatctcca ggtcacccaa gtggattccc
     2041 ctgacccagt cagagtcggc gataatctga cgtatacggt aacagtcacc aacaacgggc
     2101 cggatgccgc ggccaatgtg gtgttgaccg acctattgcc ggcgaccgtg acgttggttt
     2161 ccgcgacccc aagcagcggg gcctgtagcg gcacgactac ggttacttgt gctctgggca
     2221 acctggcgga tggggccagc ggga
//
LOCUS       DATIRS010000623         1851 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_45813, whole genome shotgun sequence.
ACCESSION   DATIRS010000623 DATIRS010000000
VERSION     DATIRS010000623.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1851
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45813"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..578)
                     /locus_tag="VLM90_07865"
     CDS             complement(<1..578)
                     /locus_tag="VLM90_07865"
                     /inference="COORDINATES: protein motif:HMM:TIGR00231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HSQ12918.1"
                     /translation="MAKHDDLNLFRNIGIMAHIDAGKTTTTERVLYYTGVSHKIGEVH
                     EGTATMDWMEQEQERGITITSAATTCFWERNGVDHRINIIDTPGHVDFTAEVERSLRV
                     LDGAVAVFDSVAGVEPQSETVWRQADRYRVPRIAFVNKMDRVGADFERTVSMMRTRLA
                     ANPVVVQLPWGREDQFKGIIDLLQMKGIFYKD"
     gene            complement(639..1109)
                     /gene="rpsG"
                     /locus_tag="VLM90_07870"
     CDS             complement(639..1109)
                     /gene="rpsG"
                     /locus_tag="VLM90_07870"
                     /inference="COORDINATES: protein motif:HMM:TIGR01029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HSQ12919.1"
                     /translation="MPRRRVAERRAVLPDPVYNSPLVTKFINGIMWGGKRSLAERTFY
                     DALRQVGDKAGDEPLKVFKRAIENVRPTVEVKSRRVGGSTYQVPVEVHQERRGALAIR
                     WIVAYARSRGEKTMTDRLAAELLDAANNRGNAVKKKEDTHRMADANKAFAHYKW"
     gene            complement(1113..1496)
                     /gene="rpsL"
                     /locus_tag="VLM90_07875"
     CDS             complement(1113..1496)
                     /gene="rpsL"
                     /locus_tag="VLM90_07875"
                     /inference="COORDINATES: protein motif:HMM:TIGR00981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HSQ12920.1"
                     /translation="MPTINQLVRKGRQAVKYKTASPALQSSPQKRGVCTRVYTQTPKK
                     PNSALRKVARVRLTNGIEVTTYIPGVGHNLQEHSIVLIRGGRVKDLPGVRYHVIRGTL
                     DSVGVSDRKKSRSKYGAKRPKGGAK"
BASE COUNT          339 a          580 c          527 g          405 t
ORIGIN      
        1 tcgtccttgt agaagatccc cttcatctgc aaaaggtcga tgatgccctt gaactggtcc
       61 tcgcggcccc aggggagctg gacgaccacg ggattggcgg cgaggcgcgt acgcatcatc
      121 gagaccgtgc gctcgaagtc cgcgccgacc cggtccatct tgttgacgaa cgcgatacgg
      181 gggacccggt agcggtccgc ctggcgccac accgtctccg actgcggctc gacaccggcc
      241 accgagtcga acaccgccac cgcgccgtcg aggacgcgca gcgaccgctc cacctcggcc
      301 gtgaagtcca cgtggccggg cgtgtcgatg atgttaatgc gatgatcgac accgttccgt
      361 tcccagaaac aagtcgtcgc ggcgctggtg atggtaatgc cgcgctcctg ctcctgctcc
      421 atccagtcca tggtcgccgt gccctcgtgc acctcgccga ttttgtgcga gacgcccgtg
      481 taataaagga cacgttccgt ggtggtggtc ttaccggcat cgatgtgcgc catgatgccg
      541 atattccgga acagatttaa gtcgtcgtgc ttagccatct tctattggta cgcacgcttc
      601 cagcgtgctg tggcggcacg ccggaggcgt gcgtaccttt accacttgta atgagcaaat
      661 gctttattcg catcggccat gcgatgcgta tcttccttct tcttcactgc gttgccgcga
      721 ttgtttgccg catcaagtaa ctcagccgcc aaacgatcgg tcatcgtctt ttcgccgcgg
      781 ctgcgcgcat aagcgacaat ccagcgaatt gccagcgcgc cacgcctctc ctgatgcacc
      841 tcaaccggca cctggtaggt ggatccaccg acgcgccgcg atttcacttc gaccgtaggt
      901 ctgacgtttt caatcgcgcg cttgaaaact ttcaagggct cgtcgccggc cttatcgccg
      961 acctgccgca gggcatcgta aaacgtgcgt tcggccagcg agcgcttgcc gccccacatg
     1021 atcccgttga tgaacttcgt gaccagcgga ctgttgtaga ccggatcggg aagtacggct
     1081 cttcgctctg caactcggcg tctcggcatc ggttacttcg cgcctccctt tggacgtttg
     1141 gcgccgtact tcgaacggct cttcttgcga tcgctgacgc cgacggaatc cagcgtgccg
     1201 cgaatcacgt gatagcgaac gcccggcaaa tccttgacgc gcccgccacg aatcaaaacg
     1261 atcgagtgct cctgcaaatt gtggccgacg ccgggaatgt aggtcgtgac ctcgatgccg
     1321 ttggtcagac gaacgcgcgc cactttgcgc agcgcggagt tcggtttctt cggcgtctgg
     1381 gtatagacgc gagtgcacac gccgcgtttc tgcggcgaac tctgcagcgc cgggctggcc
     1441 gtcttgtatt tgaccgcttg gcgtcctttg cgaactagtt gatttatcgt cggcatcttt
     1501 acctgtttct caaactcggt cccgagcgcg taaagcgcaa aagggccgcg gcctgcctct
     1561 ttccggaacg tgtccggcag tcagcgcaga caaactggcc tgctacagat ttagttaaag
     1621 ggacgttctg atttcgcttt taggcgggcg cggatttggc ttcccaatag cccaaaatta
     1681 gccgaagctt ttctgtagcg tcgcggcacc aggcggggcc gtttgccgcg ttcgcatcgt
     1741 gaatgatgcg agctttacgc cacaataatt aacgaccgat gccacgcatc gagccgggca
     1801 acgcctccgc accgacagaa ccagtaacag cgttgcacta gaggaatcgg a
//
LOCUS       DATIRS010000624         1620 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_144100, whole genome shotgun sequence.
ACCESSION   DATIRS010000624 DATIRS010000000
VERSION     DATIRS010000624.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1620)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1620)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1620
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144100"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..460)
                     /locus_tag="VLM90_07880"
     CDS             complement(<1..460)
                     /locus_tag="VLM90_07880"
                     /inference="COORDINATES: protein motif:HMM:NF014316.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HSQ12921.1"
                     /translation="MKLPRSFYEQSTIDVAKQLLGKYLVHRRDEGILTGRIVETEAYL
                     GPHDLACHASKGRTKRTDVMFGAAGHAYVYFIYGFYNMLNLVTEAKDYPAAVLIRAAE
                     PVRGIEQMKQNRKSERLGNLASGPGRLCQAFAIDRSLNGADICGKVLYLED"
     gene            complement(523..909)
                     /locus_tag="VLM90_07885"
     CDS             complement(523..909)
                     /locus_tag="VLM90_07885"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HSQ12922.1"
                     /translation="MLTGSCLCGGVKYQIDGEINALTNCHCSLCRKMSGSAFASGAAI
                     PAAAFRFTAGQELLKEWQSSPGNHRVFCGRCGTPLVKRKDKDPNSLRFRPGSLDSDPG
                     VKISKHLHVSSKAPWVEIKDGLPQSG"
     gene            complement(977..>1620)
                     /locus_tag="VLM90_07890"
     CDS             complement(977..>1620)
                     /locus_tag="VLM90_07890"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12923.1"
                     /translation="FAGRPLHVLIARPEIKTPKDLKGKVIGVDSVAGTVDYLSRVAVR
                     HFGFEPEKDVKIIVTGESPTRLAALRAGAIDATPIDVAFAVKAEDEGFKRLVYLGDLI
                     ELPLSGIAVMEQKLQTQRDQIKRVVRAGVRGLRFMKQNRNETVQMLADYLRITPSQSA
                     RAYDASINSFTDDGIISDKGVLLDVQLTKERLKLTKDIPLSQLVDWSLVREIK"
BASE COUNT          338 a          473 c          447 g          362 t
ORIGIN      
        1 ggtcttcgag ataaaggacc ttaccgcaaa tatcggcgcc attgagcgat cggtcgatgg
       61 cgaacgcctg gcaaagtctg cccgggccgc tggcgagatt gcccagccgt tcgctcttgc
      121 ggttttgctt catttgctcg atcccgcgca ctggctccgc ggctcggatc aagaccgccg
      181 ccgggtagtc cttcgcttcg gtgaccaaat tcagcatgtt gtagaatccg tagataaagt
      241 aaacataggc gtgccccgcc gcgccgaaca tcacatccgt ccgcttggtt cgccctttgg
      301 acgcgtgaca agccagatcg tgcgggccaa gatatgcttc ggtttcaacg atccgcccgg
      361 tcaaaatacc ctcgtcgcgc cgatgcacga gatatttgcc tagcagttgt ttggcaacat
      421 cgatggtcga ttgttcgtaa aatgagcgtg gcagcttcaa gggcaggttg aatcgaggta
      481 accgattctg actattgatt gctgatcgct ggcttccgtt ccctatcccg actgtggcaa
      541 tccatccttg atttcgaccc atggcgcctt cgagctgacg tgaaggtgct tagagatttt
      601 cacacccgga tcgctgtcca gactgccggg tcggaagcgt aaactgttcg gatctttatc
      661 tttccgcttc actaacggcg tgccgcagcg gccgcaaaat acccggtgat ttcccggcga
      721 agattgccat tccttgagca gctcctgtcc agccgtgaag cgaaatgccg cagccggaat
      781 cgccgccccg ctggcaaacg ccgaccccga catcttgcgg cacaagctac agtgacagtt
      841 ggttaacgcg ttaatttcgc cgtcgatttg atacttcaca ccgccgcaaa ggcaagaacc
      901 tgtgagcatt atagtatctc cgataaagtt aactctaaaa atgatctagg gacgcttcgc
      961 tcagctgaaa acaatgctac ttgatctccc gcaccaaact ccaatcgacc agctgactca
     1021 gcggaatatc cttggtcagc ttgagccgtt ccttggtgag ctgcacgtcg aggagcacgc
     1081 ccttgtcgga gataatgccg tcgtcggtga acgaattgat cgacgcgtcg taggcgcggg
     1141 cggactggga cggcgtgatg cgcagataat cggcgagcat ctggactgtt tcgttacgat
     1201 tctgtttcat gaaacgcagg ccgcgcacgc cggcgcgcac gactcgcttt atctgatcgc
     1261 gctgggtctg aagtttctgc tccatcacgg cgatgccgga aagcggcaat tcaatgaggt
     1321 cgcccaaata gaccagccgc ttgaacccct cgtcctcggc tttgaccgcg aaggcgacgt
     1381 caatgggagt agcgtcgatg gcgccggcgc gcaacgccgc caggcgtgtc ggactctcgc
     1441 cggtgacgat gatcttgaca tctttttccg gctcgaagcc gaagtggcgc acggctacac
     1501 gcgagagata atccaccgtg ccggctaccg aatcgacgcc gatgactttg cctttgagat
     1561 ctttcggcgt tttgatctcc ggccgcgcga tcaaaacatg caggggccgg ccggcaaaac
//
LOCUS       DATIRS010000625         3978 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1718512, whole genome shotgun sequence.
ACCESSION   DATIRS010000625 DATIRS010000000
VERSION     DATIRS010000625.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3978)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3978)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3978
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1718512"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..425)
                     /locus_tag="VLM90_07895"
     CDS             complement(<1..425)
                     /locus_tag="VLM90_07895"
                     /inference="COORDINATES: protein motif:HMM:NF013112.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12924.1"
                     /translation="MTTKQKFSIVSLGCARNLVDSEVMAGLLEKNNYEIVAEPNDADI
                     VMVNTCGFIGAAKEESIDTIVEIGRLKDSGKLKKLVVAGCLSQRYPTELAAELAEVDL
                     FIGTGEVPRIAEILREHEATRRRQYVGLPSYIYDHATPRT"
     gene            complement(422..1108)
                     /locus_tag="VLM90_07900"
     CDS             complement(422..1108)
                     /locus_tag="VLM90_07900"
                     /inference="COORDINATES: protein motif:HMM:NF015510.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA];
                     GO_process: GO:0044874 - lipoprotein localization to outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein carrier protein LolA"
                     /protein_id="HSQ12925.1"
                     /translation="MRKRSKKTRQILWAILLGSGLVSTVNLQSGRAAETNSAEPIIDA
                     LQRTYDATVDFVADFRQETEVKTLGRSLKASGKLSFKRPGKMLWNYDTPKGQFVLADG
                     KHLFFYQPEQNQVIKSPLKNAFRGDIPLSFLLGLGNLKKDFNATLKASDESQNVLRLE
                     PKGEAGGHNEILIGASKATSDILWVSVRDAASNLTTLRFSAMRKGVGIKDSLFQVQIP
                     NGADVVELGQ"
     gene            complement(1083..3350)
                     /locus_tag="VLM90_07905"
     CDS             complement(1083..3350)
                     /locus_tag="VLM90_07905"
                     /inference="COORDINATES: protein motif:HMM:NF013727.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HSQ12926.1"
                     /translation="MPAVIEKGRLNREIWAVVIALTALLIAISLISYSVNDRSFNTPS
                     GAVETQNWGGFLGAFLADLLLQGLGLTSYLVPVFLGAGAVQMFRATYDGISLARASAY
                     AVLLLSIGVLLSVLIDSESARDAGGIVGGFLKESILIPLFGRLSAVLIACFMLLLSIM
                     LLTQHSLLDLIGHSRKNFAEFRKSVVPAINDRIKELKENHDKRKGENTKKEKKDYTPP
                     AILTRDDPINDFLVKKPAKKPAAPAPEQFNLPEVGEGYKLPPLDLLDPPEHQQITIDK
                     ETLHANSLILQKKLEDFGVEGEVVAVRPGPVITMYEFKPAPGVKVRRIVMLADDLAMA
                     LRAVSVRILAPIPGESVVGIEIPNPRRETVYLREVIESESYRAADSKITLALGKDIGG
                     VPFSTDLAKMPHLLVAGATGTGKSVSINAMILSLLFKSSPQDVKFIMVDPKMLELTVY
                     EDIPHQLVPVVTDPKKAAAALFWAMDEMDRRYRLMREKAVRNIDGYNRAIEKESGNKK
                     DLIQLTDEEPMDQTPVIGGRLSRDAALVHGHLPRIVIIIDELADLMMTVGRDIEEYIT
                     RLAQKARAAGIHLILATQRPSVDVITGLIKANFPARISFQVTSRIDSRTILDSMGSEK
                     LLGNGDMLFLPPGTARLTRIHGAFVSDQEVRKVMKFIKQQGRPNYRTDILEAKKEVEA
                     AAAADEEHDEMYDQAVAIVTETRQASISMIQRRLRVGYNRAARMVEVMERDGVIGPAD
                     GAKPREVYAQKIEED"
     gene            complement(3363..>3978)
                     /locus_tag="VLM90_07910"
     CDS             complement(3363..>3978)
                     /locus_tag="VLM90_07910"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF036802.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HSQ12927.1"
                     /translation="GAEVHYEKVSEIHVSGHASQEELKTMLQLTRPRYFVPIHGEYRH
                     LVRHRRLAQEVGIPEENCFLLDDGDVLELTSRGAEKVKPIQVGRVFVDGKGVGDVGDM
                     VIRDRRHLSEDGMVLAVMAIHQQTGELVAGPDLISRGFMLAEESEEVMESAKQAVLAA
                     LANMNRETRRDPDELKEEVRLVLRRFFRKKLERRPVVLPYIIET"
BASE COUNT          751 a         1120 c         1200 g          907 t
ORIGIN      
        1 gttcgcggcg tggcatggtc gtagatgtaa ctcggcaagc cgacatattg gcgccgccgg
       61 gtcgcttcat gctcgcgcaa aatctcagcg atgcgcggca cctctcccgt gccgatgaat
      121 agatcgacct ccgccagttc cgccgccagt tcggtgggat aacgctgcga aagacagccc
      181 gcgaccacca gcttttttag cttgccggaa tctttgagtc ggccgatctc gacaatggta
      241 tcgatggact cttccttggc ggcaccgata aagccgcagg tgttaaccat gacgatatcg
      301 gcatcgttag gctccgcgac gatctcgtag ttgtttttct ccagcagtcc ggccatgacc
      361 tcggagtcga ccaaattacg agcgcaaccg aggctgacga tgctgaattt ttgtttggtc
      421 gtcattggcc tagttcgacg acatcggcgc cgttggggat ctgcacctga aacagggagt
      481 ctttgatgcc gacgcccttg cgcatggcgg aaaagcgcaa tgtggtcaga ttgctggcgg
      541 catcgcgcac gctgacccag aggatatcag aggtcgcctt gctggcaccg atgagaatct
      601 cgttatggcc gccggcctcg cccttgggtt ctagtcttag gacgttttga ctttcgtcgc
      661 tggctttgag ggtggcgtta aaatctttct tgagattgcc gaggcccaac aaaaacgaca
      721 gcggaatatc gccgcgaaag gcgtttttga gcgggctctt gatcacttga ttctgttcgg
      781 gctggtagaa aaacaaatgc ttgccgtcgg ccagcacgaa ctgtcccttg ggcgtgtcgt
      841 agttccacag cattttgccg gggcgcttga acgagagctt gcccgaagcc ttgagactcc
      901 gaccgagagt cttgacttcg gtttcttggc gaaagtcggc gacgaagtcg acggtggcat
      961 cgtaggttcg ctgcagcgcg tcgataatcg gttcggcgct gttggtctcc gcggcgcggc
     1021 cggactgaag atttaccgta gaaacgaggc ccgagccgag caggatcgcc caaaggattt
     1081 gcctagtctt cttcgatctt ttgcgcatat acttctctcg gtttggcgcc gtcagcggga
     1141 ccgatgacgc cgtcgcgttc catcacttcg accatccgcg cggcgcggtt gtagcctaca
     1201 cgtaaccgcc gttgaatcat agagatcgac gcctgccggg tctcggtgac gatggcgacc
     1261 gcctggtcgt acatttcgtc gtgttcttca tcggcggcag ccgcggcttc gacttctttt
     1321 ttggcttcaa gaatatcggt ccggtagttg ggccggcctt gttgcttgat gaatttcatc
     1381 actttgcgca cttcttggtc ggagacgaag gcgccatgga tgcgggttag ccgcgccgtt
     1441 cccggcggca ggaagagcat gtcgccgttg ccgaggagct tctcactgcc catggagtcc
     1501 aagatcgtcc gcgagtcgat gcgcgaggtc acctgaaacg aaatgcgcgc cgggaaattg
     1561 gccttgatca ggcccgtgat gacatcgacc gagggccgtt gggtggccaa gatcaaatgt
     1621 atgccggcgg cccgcgcctt ttgcgccagg cgggtaatgt attcttcgat gtctctgccg
     1681 acggtcatca tgaggtcggc caattcatcg atgatgatga cgatgcgcgg cagatggcca
     1741 tgcaccaacg ccgcgtctct cgacagccgg ccgccgatga ccggcgtttg atccatcggt
     1801 tcctcgtccg tcaactggat caagtccttt ttgttgccag actccttctc gatcgcccgg
     1861 ttgtagccgt cgatgttgcg cacggctttt tccctcatta gacgataacg gcggtccatt
     1921 tcatccatcg cccagaacag cgcggcggca gccttttttg gatcggtcac caccggtacc
     1981 agctggtgcg gaatgtcttc gtaaacggtc aattccagca tcttgggatc gaccataatg
     2041 aatttgacgt cctgcgggct cgacttgaac agcaggctca ggatcatcgc gttgattgac
     2101 accgatttgc cggtgccggt ggcgccggcg accaacagat ggggcatttt ggcgagatcg
     2161 gtggaaaacg gcacgccgcc gatgtctttg cccagcgcca gggtaatctt tgagtcggca
     2221 gcgcggtagg attcactctc gatcacctcg cgcaagtaca cggtctcgcg ccgcgggttg
     2281 ggaatctcga taccgaccac cgattcgccg gggatcggcg ccaagatgcg cacgctgacg
     2341 gcgcgcagtg ccatggcgag atcgtcggcc aacatgacga tgcgccggac tttgacgccg
     2401 ggcgcgggct tgaactcgta catggtgatg accgggccgg gacgtaccgc gacgacttcg
     2461 ccttcgacgc caaagtcttc gagctttttc tgtaagatca gcgagttggc gtgcagggtt
     2521 tctttgtcga tagtgatttg ctgatgttcg ggcggatcca aaagatccag cggcggcaat
     2581 ttgtaaccct cgccgacctc cgggagatta aactgttcgg gcgccggcgc cgccggcttt
     2641 ttggccggct ttttaaccag gaagtcattg atgggatcgt ctctggtgag gatagccggc
     2701 ggggtgtagt cttttttttc tttcttggtg ttctcgcctt tgcgtttatc gtgattttct
     2761 ttgagttcct ttatccggtc gttgatcgcc ggcaccacgg atttcctaaa ctcggcgaaa
     2821 ttcttcctgc tatgaccgat cagatcgagc agcgaatgct gggtcagcaa catgattgac
     2881 aggaggagca tgaagcaggc gatcaacacc gcgctcaagc ggccgaacaa cgggattaaa
     2941 atactttctt tgagaaagcc gccgacaatg ccgccggcgt cgcgggcgct ttcgctgtcg
     3001 atgaggacgc tgagcaggac gccgatactc agcaggagaa ctgcgtaggc tgaagcgcga
     3061 gccaacgaaa tgccatcgta agtggcgcga aacatttgca ccgcgccggc gccgagaaac
     3121 accgggacta aataggaagt cagccccagc ccctggagca gcagatcggc gaggaaagcg
     3181 ccgagaaaac cgccccaatt ttgcgtttcg accgcgcccg acggcgtatt gaacgagcga
     3241 tcgttgacgc tataggaaat caagctgatg gcgattagca gcgccgtaag tgcgatcacg
     3301 acagcccaga tttctcggtt gagacggccc ttttcgatga cagctggcat agttcggttt
     3361 ccttaggttt cgatgatgta gggcagcacc acggggcggc gctcgagttt cttcctgaaa
     3421 aatcgccgca ataccaggcg cacttcctcc ttgagctcgt ccgggtctct gcgggtctcg
     3481 cggttcatgt tggccagggc ggcgagcacg gcctgtttgg cgctctccat gacctcttcg
     3541 ctttcttcgg cgagcatgaa gccgcgggag atcaaatccg gcccggcgac gagttcgccg
     3601 gtttgctgat ggatcgccat gaccgccagg accatgccgt cttcggacag gtggcggcgg
     3661 tcgcggatga ccatgtcgcc gacgtcgccg acgcctttgc cgtcgacgaa gacccgccca
     3721 acttgaatcg gcttgacctt ctctgcaccc cggctggtca attcgaggac gtcgccgtca
     3781 tcgagcagga aacagttttc ctcggggatg ccgacctctt gggcgagccg ccggtggcgg
     3841 acgagatggc gatattcgcc atggatcggc acgaaatagc gcggccgggt gagttgtaac
     3901 atagttttca gctcttcctg gctggcgtga ccggagacgt ggatctccga gactttttcg
     3961 tagtgcacct cggcgccg
//
LOCUS       DATIRS010000626         1926 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_45904, whole genome shotgun sequence.
ACCESSION   DATIRS010000626 DATIRS010000000
VERSION     DATIRS010000626.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1926)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1926)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1926
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45904"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            178..1332
                     /locus_tag="VLM90_07915"
     CDS             178..1332
                     /locus_tag="VLM90_07915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HSQ12928.1"
                     /translation="MTNLSGKCAIVGMGETVVGKRPDATTNSLHLEAIKACLDDAGIK
                     ASQVDGLLTNQPLNDAHRSYATKLSHMAGIDPLFATDLALGGATPIAMVQHAVMAIEA
                     GMATTVVCVHARKRSTADPTPGHPIRRGDEHWEEPWGHFAAAGGHAFAAQRHMYEFGT
                     TSEDLAHVAVSTRYHASLNKNATLRKPMTIEEHQQSRMIVAPLRLFDCSLESDGGGAV
                     LVTSAERARDFPKKAVAILGMGQHHPHFSLLDAPTLTTLGGKRSSETAYRMAGMKPKD
                     MQFAQIYDCFTITAMITLEDYGFCKKGEGKDFVKNGRITLGGQLPLNTHGGLLSQAHL
                     EGQLHITEAVKQLRGNEVEPERQVPNAKVGIVSGHGGSLSMHATMILGGL"
     gene            1329..1760
                     /locus_tag="VLM90_07920"
     CDS             1329..1760
                     /locus_tag="VLM90_07920"
                     /inference="COORDINATES: protein motif:HMM:NF013920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-ribbon domain-containing OB-fold protein"
                     /protein_id="HSQ12929.1"
                     /translation="MSKDERGRAARRGQPYLEEPEAKPFWANLREHRLTAQRCSSCQK
                     IFGFPPQSHCPHCLAKEYEWVPLSGKGTIYSHIAYHRAWHPAYQDKVPYNVSLVDLDE
                     GGRLVTNVVGCPPEEVKIGMNVEVIFEDLPDYTLPKFQPVK"
BASE COUNT          450 a          593 c          549 g          334 t
ORIGIN      
        1 gctcggggcc agtgaagcaa ctgagcaact ctggtaatga atttacgcat cgccttgaca
       61 gtagaaaaac ctcccgtata agatcgctcc aacaagaaaa ttggcatcgc actgaaaaag
      121 cactctgatc ggttcactgc caaataggct ttttaaaaag tcgacgaaag gaaaatcatg
      181 acgaacctca gtggcaaatg cgccatcgta ggaatgggcg agaccgtggt ggggaaacgt
      241 cccgacgcga ccaccaactc gctccatctc gaagcgatca aggcctgcct cgacgacgct
      301 ggcatcaaag cgtcgcaggt cgacggccta ttaaccaacc aaccgctcaa cgacgcgcat
      361 cgcagttacg ccaccaagct ctcgcatatg gccggcatcg atccgctgtt cgccaccgat
      421 ctggcgctcg gcggcgcgac gcccatcgcc atggtccagc atgcggtgat ggcgatcgaa
      481 gccggcatgg caaccaccgt cgtctgcgtc catgcgcgca agcgctccac cgccgatccg
      541 acgcccggtc atccgatccg gcgcggcgac gagcattggg aggagccctg gggccacttc
      601 gccgccgccg gcggccacgc ctttgcggcg cagcgccaca tgtatgagtt cggcaccacc
      661 agcgaagacc tcgcccatgt cgccgtgtcg acgcgctacc acgccagcct caacaagaac
      721 gccaccctgc gcaaacccat gaccatcgag gagcaccagc agtcgcgcat gatcgtcgcg
      781 ccgctgcgcc tgttcgattg ctcgctggaa tccgatggcg gcggcgccgt gttggtgacc
      841 agcgccgagc gggcgcggga tttccccaag aaagcggtgg cgatcttggg catggggcag
      901 catcacccgc acttcagcct gctcgatgcg ccgacgctga cgacgctcgg cggcaagaga
      961 tcttccgaga cggcctaccg catggcgggg atgaaaccta aagatatgca attcgcgcag
     1021 atctacgatt gtttcacgat cacggcgatg atcacgctgg aagattacgg tttctgtaaa
     1081 aaaggcgaag gcaaggactt cgtcaagaac ggccgaatta ctctcggcgg ccaactgccg
     1141 ctcaacaccc acggcggctt gttatcgcaa gcccatcttg aaggccagct gcacatcacc
     1201 gaggcggtca aacaactgcg cggcaacgaa gtcgagccgg aacggcaggt gccaaacgcc
     1261 aaagtcggca tcgtcagcgg ccatggcggc agcctttcta tgcatgcaac gatgatcttg
     1321 gggggattat gagcaaagac gaacgtgggc gcgccgcgcg ccgaggacaa ccctatctcg
     1381 aagagcctga agccaaaccg ttttgggcca atttgcggga acacagacta accgcccaac
     1441 gctgctcgtc atgccagaaa atattcggtt tcccgccgca gtcccattgt ccgcattgcc
     1501 tggcgaagga atatgaatgg gtgccattga gcggcaaggg aacaatttat tcccatatcg
     1561 cctaccaccg agcttggcat ccggcgtacc aggacaaagt cccctacaac gtgtcgctgg
     1621 tcgacctcga cgaaggcgga cggttggtga ccaacgtggt cggctgcccg ccggaagaag
     1681 tcaagatcgg catgaacgtc gaagtaatct tcgaggacct gccggactat acgctgccga
     1741 agtttcagcc ggtgaaatga gccaaacgcg gagactccga agttcaccaa ataaatcatc
     1801 cgtcattgcg ggtgggattt tgggctggat tccggcctgc gccggaatga cggagagaaa
     1861 ttgccgaccc atttcgcgaa tgcctgggcc agcacaccgg gcatacctcg cgatgattac
     1921 tttctc
//
LOCUS       DATIRS010000627         2504 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1227063, whole genome shotgun sequence.
ACCESSION   DATIRS010000627 DATIRS010000000
VERSION     DATIRS010000627.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2504
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1227063"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2029
                     /locus_tag="VLM90_07925"
     CDS             <1..2029
                     /locus_tag="VLM90_07925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12930.1"
                     /translation="APATANAHGEFSVTNQSITIKSLTIRSQLGNAEASGNLAFTPIG
                     SINDGHIVARNLDWESVKKFMPAPFNQWNYRGQAELEMKLQGPWRALQIDGNARSDAA
                     QVRAANFALASFSLRAPFRWANGQLAIQNGRVDGKKFSFAGSDQLKSTVEEAEIGAIG
                     YDPKKPGLITAQVNLTGGQFAAAVSSKVGEGLAFNGSVEVAAHADSNTTAMVASLNLT
                     AGELLWGKFFGDLKSQKPALTIDAEYSRDNDRLQCRRCDLSLATVGQVNLTGSVEQIT
                     GTPQLRLQARSDNLSPAGFFEFFLRETFHRQYPLLDKLEVGGQMTILLQVDGPLEQLV
                     ASGNLALKNGAFGAKTNDWQLAAINLQLPFQVSLSDRPGQNTATPALGLLSIGRARFG
                     NQQLAPMTTTVALANNALRLHQSLRIAVFGGEVELRNVSWPDIIHDPKAVTFSADTKR
                     LQLQDLTEAFDWPRFSGQLNGAIPEVESAGSTLRTRGEIQAEIFGGRVRLSKLEIDNP
                     FSTLASIKMSAKLESIELEQLSKTFAFGRISGILEGSVDDLVITDGQPSQLRADLHSV
                     ERSGVAQRISVDALNKITVLSSGQEAGSLYGGLASLFDSFRYSKLGFKATLRNDRLTL
                     HGVESQGDKEFLVVGSLLPPTVNIISHTQSIAFSELVRRLERIKSDKPEVK"
     gene            2042..>2504
                     /locus_tag="VLM90_07930"
     CDS             2042..>2504
                     /locus_tag="VLM90_07930"
                     /inference="COORDINATES: protein motif:HMM:NF018701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1318 domain-containing protein"
                     /protein_id="HSQ12931.1"
                     /translation="MLKRTTFILAFIVSACVTVNIYFPAAAVERAAEQIVKETWGEPS
                     KSSPPPSPQSDNRFLPWRLASLSLVGAVHAQEADINVSNPAIRAIKDSIKARSEAIKP
                     FMDRGSIGIAADGLLAIRNTDGLNLKERAESKQLVDAENRDRENLYAEIAKA"
BASE COUNT          565 a          759 c          706 g          474 t
ORIGIN      
        1 cgcgccggcg acggcaaacg cccacggcga attttccgtg acgaaccaat ccatcaccat
       61 caagtcgctt acgatacgct cccaactggg caacgccgaa gcctcgggca atctggcgtt
      121 cacgccgatc ggcagcatta acgatggcca tatcgtggcg cgtaatctcg actgggagag
      181 cgtgaaaaag ttcatgccgg caccgttcaa tcaatggaac tatcgaggcc aagccgagct
      241 ggagatgaaa ctccagggtc catggcgcgc gctgcaaatc gacggcaatg cgcgcagcga
      301 cgctgcccaa gtgcgtgcgg cgaattttgc cctggcaagt ttttcgctca gagcgccgtt
      361 tcgctgggcc aatggtcaac tggcgattca aaacggccgc gtcgatggca agaagttttc
      421 attcgcagga agtgaccaac tcaaaagcac ggtcgaggag gccgaaatcg gcgccatcgg
      481 ttacgaccca aagaagcccg gcttaatcac tgcacaggtc aatttgaccg gcgggcagtt
      541 tgccgcggcg gtcagcagca aagttggcga aggcttggcc ttcaacggca gcgtcgaggt
      601 agccgcccat gccgatagca acaccacggc gatggttgcc agcctcaatc tcaccgccgg
      661 cgaactgtta tggggaaagt tcttcggcga tctaaaatct cagaaaccgg cgctgacaat
      721 agacgccgag tattcgcgtg acaacgaccg gctgcaatgc cgccgctgcg acctctccct
      781 cgccaccgtg ggccaggtga atctcaccgg cagcgtcgag caaataaccg gcacaccgca
      841 gctccgcctg caggcgcgca gcgacaatct gtcgcctgcg ggttttttcg aatttttctt
      901 gcgtgaaact ttccaccggc aatatccgct gctagacaag ctcgaagtag gcggccagat
      961 gacgatccta ttgcaggtcg acggccccct cgaacagctc gtcgccagcg gcaacctggc
     1021 gctcaagaac ggcgcgttcg gcgcgaaaac gaacgattgg cagctcgccg ccatcaatct
     1081 acagctaccg tttcaagtca gcctcagcga tcggccgggt cagaacacgg ccacacccgc
     1141 gcttggcttg ctgtccatcg ggcgcgctcg attcggcaac cagcagctgg cgccgatgac
     1201 aaccaccgtc gcccttgcaa ataacgcgct gcggctgcat cagtccttgc gcatcgcagt
     1261 cttcggtggc gaggtcgagt tacgcaatgt ctcgtggccc gatatcatcc acgatcccaa
     1321 agccgtgaca ttttcggccg acaccaaacg gctgcaactg caagatttga ccgaggcctt
     1381 cgattggccg cgctttagcg gccagctgaa cggcgccatc cccgaagtcg agtctgccgg
     1441 tagtacgctg cgcacccgcg gtgagattca ggctgaaatt ttcggcggac gcgtccgttt
     1501 gagcaaactg gagatcgaca atccgttttc cacgctagcg tcgattaaaa tgagcgccaa
     1561 actggaatcg atcgagctcg aacaactgtc caagaccttt gcattcggcc ggatctcagg
     1621 catcttggag ggcagcgtcg acgatctggt catcaccgac ggccagccgt cgcaattgcg
     1681 cgccgacctg cactcggtgg aacgcagcgg cgtcgcccag cgcatcagcg tcgatgcgtt
     1741 gaataaaatt accgtgctca gctcgggcca ggaagccggc tcgttgtacg gcgggctcgc
     1801 cagtcttttc gacagctttc gctacagcaa gctgggtttc aaagcgactt tgagaaacga
     1861 tcgtctaacc ttgcatggcg tggaatccca aggcgataaa gaatttctgg tggtgggcag
     1921 tttgttgcca ccgacggtaa atatcatcag tcacactcaa agtatcgctt tctcggagct
     1981 cgtgcgccgc ttggaacgga tcaaatcgga caaaccagaa gtcaaataac ccggaggagc
     2041 aatgttaaaa cgtacaacct ttattttggc cttcatcgtc agcgcctgtg taaccgtaaa
     2101 catttatttc cctgccgccg cggtggagcg cgccgccgag cagatcgtca aagaaacttg
     2161 gggcgaaccg tcgaagtcat ccccgccgcc gtcgccgcaa agtgacaatc gatttttgcc
     2221 ttggcggttg gcatctctga gtctcgtcgg cgcagtccat gcgcaggagg ctgacatcaa
     2281 cgtgtcgaat ccggcgattc gcgcgatcaa ggactcgatc aaggcgcgca gcgaagcgat
     2341 caaaccgttc atggatcgcg gcagtatcgg catcgcggcc gacggcctgc tggcgatccg
     2401 caacaccgat ggccttaact tgaaggagcg agcagagtcc aaacagctgg tcgacgccga
     2461 gaaccgcgat cgcgaaaacc tctacgccga gatcgccaag gcca
//
LOCUS       DATIRS010000628         1738 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1522166, whole genome shotgun sequence.
ACCESSION   DATIRS010000628 DATIRS010000000
VERSION     DATIRS010000628.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1738
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1522166"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1270)
                     /gene="tgt"
                     /locus_tag="VLM90_07935"
     CDS             complement(<1..1270)
                     /gene="tgt"
                     /locus_tag="VLM90_07935"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: protein motif:HMM:TIGR00430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HSQ12932.1"
                     /translation="MVTLPLHNTRLQFTLEAESPGSQARAATFQTLHGAVETPIFMPV
                     GTQATVKAQTVESLQATGARVLLANTYHLLLRPGAAVFKKFGGIHRFMRWPGPVLTDS
                     GGFQIFSLPHSRAMNEAGANFKSYVDGKSYLLSPESSIEMQQAIGSDIMMVLDQCIPA
                     TAAYPQAQAAMELTHRWAQRSLQARGDAPAALFAIVQGAGHAQLRKLSAAFLRELPFD
                     GFAIGGLAVGETHAERYDLTALVTEQLPAQLPRYLMGVGTPSDLLEAVHRGVDMFDCI
                     IPTQLAQRGVAYTSHGKLQLRRTVHKLADDPVDALCDCQCCRDYSRAYLHHLIKSAEA
                     LGWHLLGMHNLAFYHRLMKEMRERILTGDFAAYYREKRAELMRADEDNPTRPPKKNKV
                     VQPARLGDYELHRSVHGFYSIRQISSGEIMH"
BASE COUNT          338 a          471 c          546 g          383 t
ORIGIN      
        1 agtgcatgat ttcgccggag ctgatctggc gaatgctgta gaaaccatga accgagcggt
       61 gcagctcata atcgcccagg cgggccggct ggacgacttt gtttttcttc ggcgggcgag
      121 tcggattgtc ttcatcggcg cgcatcagct cggcgcgctt ctcacggtag tacgcggcga
      181 aatcgccggt taaaatgcgt tcgcgcattt ccttcatcag gcgatggtag aacgccaggt
      241 tgtgcatgcc caagagatgc caaccgagcg cttcagccga tttgatcagg tggtgcaggt
      301 aggcgcgcga gtaatcccgg cagcattggc aatcgcaaag ggcgtcgaca gggtcgtcgg
      361 cgagtttatg aaccgtgcgg cgcaattgta gtttgccgtg ggaggtatag gcgacgccgc
      421 gttgcgccag ttgggtcggg ataatgcagt cgaacatgtc gacgccgcga tggaccgcct
      481 cgagaagatc gctgggcgtg cccacgccca tgagatagcg cggcagttgc gccggcagct
      541 gctcggtgac cagcgcggtg agatcgtaac gctcggcgtg agtctcgcct acagcgagac
      601 cgccgatggc gaaaccgtcg aagggcagtt cgcgcaggaa tgcggcgctc agttttctca
      661 gctgcgcatg gccggcgccc tgaacgatag cgaagagtgc ggccggggcg tcgccgcgcg
      721 cctgcagcga acgttgcgcc caacgatggg tcaactccat ggccgcctgt gcttgaggat
      781 acgccgcggt ggcggggatg cattgatcga gcaccatcat gatatcgcta ccgatggctt
      841 gctgcatttc aatgctcgac tcaggcgaca gcaaatagct cttgccatcg acgtagcttt
      901 tgaagtttgc gccggcttca ttcatggctc gcgaatgggg cagcgagaaa atctgaaagc
      961 cgccggagtc cgtcagcacc gggccgggcc aacgcatgaa gcggtgaatg ccgccgaatt
     1021 tcttgaagac tgcggcgccg ggacgaagca ggagatgata ggtgttcgcc aacaacacgc
     1081 gcgcgccggt tgcttgcaaa ctttccacgg tttgcgcttt gaccgtcgcc tgggtgccca
     1141 ccggcatgaa gatcggtgtt tcgacggcgc cgtgcagcgt ttgaaaggtt gccgcgcggg
     1201 cctgggagcc aggcgattcg gcttccaagg tgaactgcaa gcgggtgttg tggagcggta
     1261 aagttaccat aggtcggact atctctcgca aaggcgcaag gcgctaagtt tgcgggccga
     1321 tgcccgtcat cccgcgcgaa cgcgagggat cttagagaga tttctccctt cggtcgaaat
     1381 gacatccctt ccggcctcag cgtctttgcg cctctaatga aaatgccgat tctaggcaaa
     1441 aatcccccgg tccttcggcc cgcccccttt ggcaaagggg gccattgggg gattttccgt
     1501 tgttgctttg aacgtggcgc agctcatttt catttgctgt gttgtgccga ccggtacatg
     1561 agttactttg cgagctttgc gcgagaaaaa cattcttcgg ttcctggttc taacaattct
     1621 caataagtct tcggcgtctt gtaaccaacc tgtttacgct ctttcataag tgccttgtaa
     1681 gtttccgggt gagattttac gttgtacggg cagacatcga cgcacaggtg acagtatt
//
LOCUS       DATIRS010000629         2421 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1719264, whole genome shotgun sequence.
ACCESSION   DATIRS010000629 DATIRS010000000
VERSION     DATIRS010000629.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2421
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1719264"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(194..655)
                     /locus_tag="VLM90_07940"
     CDS             complement(194..655)
                     /locus_tag="VLM90_07940"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HSQ12933.1"
                     /translation="MIRIIKISTWLAAGLLLMLGAAWTFAQAQAPPTGDVQVFRNAQE
                     TVFVFPRVGPVDRKGDLVGAGDLTGQVRQALLNLRLMASRVGVSPAHVVTLTVYGADS
                     SLRDVMEKSAREAFSDWGPATAFVEAKNLRPAGAMVEVEAVAVVRGLKPGK"
     gene            complement(685..828)
                     /locus_tag="VLM90_07945"
     CDS             complement(685..828)
                     /locus_tag="VLM90_07945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12934.1"
                     /translation="MDNVALGIVEFAAKPGLKGKSAETLTDSTLVRELEQEGFFAGLY
                     PGR"
     gene            complement(1055..>2421)
                     /locus_tag="VLM90_07950"
     CDS             complement(1055..>2421)
                     /locus_tag="VLM90_07950"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ12935.1"
                     /translation="TTCPDINNSPTEWIIAQKDGIQKGKIRGPRLWISGHALDGPRPQ
                     EMSEQRWQRGSIIVRTDEEARAAVRAHVEKGMDGFKVLERVSPEVAKAIADEARKLGK
                     PVIGHSVNMWETIDAGYTSIEHSWAVMFTTIKDPKKRAEIDMNRMVGKVGTVESHVNM
                     VPEQFDEIIKAMIAKDIHWSPAWATQFRGLSPRAAEMKKRELATLKIPNLSYLPAYNL
                     EAVENYFAGFEKMTPERRAPLDAAYKMVQDFARRYVAAGGKMHSGSDPGTLLPAYGLH
                     AELELAVDAGLSPLVAIQSASLNVAQAWGKDKDFGSVEKGKVADLVIVRGDVMKDIAA
                     TQNIEKVFSDGKAVDTSYHANYRNPIPRPMSDRFITRLSQVSPAALTEGVAGQVKLAG
                     ANFRPSHQVLLNGKKAASKFVSGRELEVQVPALAAGTHKVTVIDPGVAASESNTVYLV
                     VSFK"
BASE COUNT          481 a          750 c          651 g          539 t
ORIGIN      
        1 tgaaaaggct caatagttgc attgaataac ccagaaaacg aattcgactg gtgagaacta
       61 acctgattcg cttttgcaat tatagaaagt gggcaataaa gcccttttga ttgaataggt
      121 cgacttctag caacgcgctt cccgactcgt caccatgatg cgtccgtaac ctgcccgaaa
      181 ggccggactg gcttcacttc cctggtttca atcctctgac tacggcaacc gcttcaactt
      241 ccaccattgc gcccgctgga cgcaagtttt tcgcttccac gaaggcggtc gccgggcccc
      301 aatcgctgaa cgcctcgcgg gcgctttttt ccatcacgtc gcgcaacgag ctatcggcgc
      361 catagaccgt caaggtcacc acgtgggccg gcgagactcc cactctcgat gccatcagtc
      421 gcaggttcaa cagcgcttgt cttacttgcc cggtcaaatc ccccgcgcca accaggtcac
      481 ctttcctgtc cacgggtcct accctgggaa acacgaacac agtctcctga gcgttcctga
      541 acacttgcac gtcgcccgtc ggcggcgcct gtgcttgcgc gaatgtccac gcggcaccga
      601 gcattaacag caaaccggcg gcgagccaag ttgaaatttt aatgatcctg atcatcgcca
      661 agaaaaatcg cactgcccca tgactcaacg tcctggatag agcccggcaa aaaaaccttc
      721 ctgttcgagt tcgcgcacca gggtcgagtc ggtcagcgtt tcggctgatt ttcctttaag
      781 gcccggcttg gctgcgaact ctacgatgcc cagggcgacg ttatccaact tcgggtatgg
      841 cttttcaggg atcgcgtgct ggacataggt ccggtggatg aaatctgacg acaactggat
      901 tcatgaccgg cgcacgcccg gtgccgtcga tcaacatcgc gccgtaaatg accgtacagc
      961 ggcattgcgc tactaccgaa ccagcggagc ataggatgat gaagccgagc ggcgcgcatc
     1021 gtaatatata gggttaatgg tcgtgaggtt gctgctactt gaatgaaacc accaggtaga
     1081 cggtgttgga ctccgaagcg gcaacgcccg gatcgatcac ggtgacttta tgcgtccccg
     1141 ccgctagcgc cggcacttga acttccaact ccctgccgct gacaaacttg ctcgcagctt
     1201 tcttaccgtt cagcagcacc tgatgcgacg ggcgaaagtt ggcgccggct aacttcacct
     1261 ggccggccac gccctcagtc aacgccgcgg gggaaacttg cgataacctt gtgataaaac
     1321 gatccgacat cggccgcgga atagggttgc gataattggc gtggtacgac gtgtccaccg
     1381 ctttgccgtc gctaaatact ttttcaatat tctgggtcgc cgcgatatct ttcatcacgt
     1441 cgccgcgcac gatcaccagg tcggcgactt tgcctttctc aacgctgcca aagtctttgt
     1501 ctttgcccca ggcttgggcg acgttaagac tcgccgattg gatcgccacc agcggactca
     1561 agccggcgtc gacggcgagt tcaagctcgg cgtgcaggcc atatgccggc aagagcgtgc
     1621 ccggatccga cccggaatgc atcttgccgc cggcggcgac gtaacggcgc gcgaagtctt
     1681 gcaccatttt gtaagccgcg tccagcggcg cgcgtctttc cggcgtcatc ttttcgaagc
     1741 cggcgaagta gttctccacg gcttccagat tgtacgccgg caaataggat agattgggaa
     1801 tcttcagcgt cgccaattcg cgtttcttca tctcggccgc gcgcggcgac agcccgcgaa
     1861 actgcgtcgc ccacgccgga ctccagtgaa tgtctttggc gatcatcgct ttgatgatct
     1921 catcgaattg ctccggcacc atgttgacat gggactccac ggtgccgacc ttgccgacca
     1981 tgcggttcat gtcgatctcg gcgcgtttct ttgggtcctt gatggtcgtg aacatcaccg
     2041 cccaggaatg ttcgatggac gtgtagccgg catcgatggt ctcccacata ttgaccgagt
     2101 ggccgatcac cggcttgccc aacttgcgcg cctcgtcggc gatcgccttg gcgacttccg
     2161 gtgacacccg ttcgagaact ttgaaaccgt ccatgccctt ctcgacatgg gcgcgcaccg
     2221 ctgcgcgcgc ttcttcgtcg gtgcgcacaa tgatgctgcc gcgctgccaa cgctgctccg
     2281 acatctcctg cggccgcggt ccatcgaggg cgtggccgga tatccacagc cgcggaccgc
     2341 gaatcttacc tttttgtatg ccgtccttct gagcgatgat ccattccgtc gggctattat
     2401 tgatatcggg gcaagtggtc a
//
LOCUS       DATIRS010000630         2270 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1817332, whole genome shotgun sequence.
ACCESSION   DATIRS010000630 DATIRS010000000
VERSION     DATIRS010000630.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2270
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1817332"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..640
                     /locus_tag="VLM90_07955"
     CDS             <1..640
                     /locus_tag="VLM90_07955"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSQ12936.1"
                     /translation="LDGKDPWTLPVAQLQRLRGRLFLAPQTPPLPPRQRTITSLLAAR
                     LPAQSLWQSLRSLVYPSGIAEAYAALEKFDLADKMWDRVDRLSGGERQRVGLARALLA
                     PAALWLIDEPLSALDPTRAKLAIDTLTEAARQQGVTLIVTLHQVNVAARFPRIIGLRD
                     GELAFDLPAAEVSRERLAKLYAQFEHELAGSRVAAAETAPALDPAAIVSRAG"
     gene            643..1479
                     /locus_tag="VLM90_07960"
     CDS             643..1479
                     /locus_tag="VLM90_07960"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSQ12937.1"
                     /translation="MNGATSVAPALRDPAAHKRLFWALAALVILAPVLYATEFKIWLF
                     FAPDNFKITARFVGDFFPPKVSPEFLAMVAREAWRTVAIATAGIALALVFAIPLALAS
                     TAVLSVSALPGRMNVLPFAFRQMVRLLLILLRSIPELVWALVFVRVVGLGATAGVLAI
                     ALTYSGMLGKVYGDILESSDLQSTASLMRNGAGRLQAFFYGLLPQNGGELTSYTIYRW
                     ECAIRSSAVLGFVGAGGLGQQMEMSMKMFNGSEVSTMLLAFMLLVWLADYVSLRLRKV
                     IA"
     gene            1476..>2270
                     /gene="phnE"
                     /locus_tag="VLM90_07965"
     CDS             1476..>2270
                     /gene="phnE"
                     /locus_tag="VLM90_07965"
                     /EC_number="7.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015416 - ABC-type phosphonate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015716 - organic phosphonate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter, permease protein
                     PhnE"
                     /protein_id="HSQ12938.1"
                     /translation="MNAATQAPSAPAQFLRARYGAALWIAAIAALTAASFWSLNLQWA
                     NVFSADSMRRMSKFLGELLAPSGERAFLTRLGLASLETLAMSALGTLLAALGGVALAL
                     PASRSYAADGSLARTPVRLLLNILRSIPELVWAALLLISAGLGPLAGTLALAMHTTGV
                     LGRLFAEAIENAPPAPSYALRVQGVPAGRVFLYATLPQVLPQIFSYTLYRWENNIRAA
                     AVLGVVGAGGLGQMLAFHMGLFHMRETSSVLIAMIALVALVDLLSYV"
BASE COUNT          342 a          730 c          697 g          501 t
ORIGIN      
        1 cctcgatggc aaagaccctt ggaccttgcc cgtggctcaa ttgcaacggc tacgcgggcg
       61 gctgtttctg gcgccgcaaa ctccgccgct gccgccgcgc cagcgcacga tcacctcctt
      121 gctcgccgcc cgactgccgg cgcaatctct ctggcaaagt ctacgttcct tagtctatcc
      181 cagcggcatt gccgaagcct acgccgcgtt agaaaagttc gacttggccg ataaaatgtg
      241 ggatcgcgtc gaccgtcttt ccggcggcga gcgccaacgg gtcggtctgg cgcgcgcgct
      301 gctggcgccg gcggcgttat ggttgatcga tgaaccgctc tcggccctcg atccaacccg
      361 cgccaaactg gccatcgaca cactgaccga ggcggcgcgc caacagggcg tgaccctaat
      421 cgtgacgctg caccaggtca atgtcgcggc gcgctttccg cgcatcattg gcttgcgtga
      481 cggcgaattg gccttcgatc tacccgccgc cgaggtgagc cgcgaacggt tggcgaaatt
      541 gtatgcccaa ttcgaacatg aactggccgg cagccgcgtc gccgcggccg agacggcacc
      601 ggctctcgat ccggcggcca tcgtttctcg ggcgggctga ccatgaacgg cgccacctcg
      661 gtagcaccgg cgctgcgcga tccggcggcg cacaaacggc ttttctgggc gcttgccgcg
      721 ctagttattc ttgccccagt actctacgcc actgagttca aaatctggct gtttttcgct
      781 cccgataatt ttaaaatcac ggcgcgtttc gtcggcgatt tttttccgcc caaagtaagc
      841 ccggagtttc tcgccatggt ggcccgcgaa gcttggcgca ccgtcgccat cgccaccgcc
      901 ggcatcgccc tagctttggt gttcgccatc ccgctagccc tggcgtccac cgcggtgctg
      961 tcggtttccg cgctgcccgg acgcatgaat gtattaccct tcgcctttcg ccagatggtg
     1021 cgcttgctgt taattctcct gcgcagcatc cccgagttgg tctgggcgtt ggtatttgtc
     1081 cgcgtggttg gcctcggcgc caccgccggc gtactggcca tcgcgctgac ctacagcggc
     1141 atgctcggca aagtctatgg cgatatactc gaaagcagcg atcttcagtc caccgcttca
     1201 ttgatgcgca acggcgccgg gcgtttgcaa gctttttttt acggcttgtt gccgcaaaat
     1261 ggcggagagc tgaccagcta cacgatctac cgttgggagt gcgccatccg ctcttcggcg
     1321 gtgctcgggt ttgtcggggc gggcggcttg gggcagcaga tggaaatgtc catgaagatg
     1381 ttcaacggct cggaagtgag caccatgctg ctggcgttca tgttgctggt ttggttggcc
     1441 gattatgtga gcctgcgctt gcgcaaggtg atcgcatgaa cgcggcaacg caagcgccga
     1501 gtgcaccggc gcaattcctg cgcgcgcgct acggcgccgc cttatggatt gccgctatcg
     1561 ccgcgctgac cgcggcaagt ttctggtccc tcaacctgca atgggcgaat gtcttttccg
     1621 cggattccat gcgccgcatg tccaagttcc tcggcgaatt gctcgcgcct tcgggagagc
     1681 gcgcttttct cactcggctt gggctggcca gtctggaaac cctggcgatg tcggcgctcg
     1741 gcacgttgct cgcggccctc ggcggtgtgg cactggcgct gccggcgagc cggagctacg
     1801 cggctgacgg ttcgttggcg cgtacgccgg tgcgtctgct actcaacatt ctgcgttcga
     1861 tcccggagct tgtctgggcg gcattgttgc tgatctccgc tgggcttggc ccgcttgccg
     1921 gcaccctcgc cctagcaatg cataccaccg gtgtgctcgg cagacttttt gccgaagcca
     1981 tcgagaacgc gccgccggca ccgtcctatg ccttgagagt gcagggagtg cccgcggggc
     2041 gagtgtttct ttacgccacg ctgccccaag tgctgccgca gatattttcc tacacgctct
     2101 atcgctggga gaacaacatt cgcgcggcgg cagtgctggg cgtggttggc gccggcggcc
     2161 tcggccagat gctggcgttc cacatgggac ttttccacat gcgggagacc agttcggtgc
     2221 tcatcgcaat gattgcgctg gtggcgcttg tcgaccttct gtcctatgtc
//
LOCUS       DATIRS010000631         2530 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1914523, whole genome shotgun sequence.
ACCESSION   DATIRS010000631 DATIRS010000000
VERSION     DATIRS010000631.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2530
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1914523"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..583)
                     /locus_tag="VLM90_07970"
     CDS             complement(<1..583)
                     /locus_tag="VLM90_07970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12939.1"
                     /translation="MSITKRKSFVIAVGLFALGALTQIALETLADARAGGGRSGGFRG
                     SRSSQAPSRAANPTSPQRQDAMPAQQARQPASMMPQSGGFMRGLGTAVLGGFLGSMLF
                     SGLAGASGMGGMGGGMGGSGFGMIEILLFGGLAYFLYRKYKASRTPALATGGGSMQYQ
                     DTSYQAPTPSNYSNNPPVQEPLPFNGTDYRSLTM"
     gene            756..1997
                     /locus_tag="VLM90_07975"
     CDS             756..1997
                     /locus_tag="VLM90_07975"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12940.1"
                     /translation="MAEPKWYQELTPYQWRVLVCACLGWALDIMDGYLYAIILFPAMS
                     DLLGTSEPAVIGWYGGIVLSIFMIGWALGGLIFGPIADRYGRAKTMAITILIYATFTG
                     LCGIANSWWELAIFRFLTGLGIGGEWAAGAALIAESFPEKSRAKAAGIMQASGGIGFF
                     LATALYLIIGPYGWRWVFAFGILPAIVAFYVRYSLEEPARWTNAKQTGNPYPALFAPA
                     VRRDLLVGTSLAVVANFGYQGAVQWVPSWIAAMLHAQGTRAVIPQVSLITTTLTTGGI
                     IGCLCMPLIAERWGRKGALFIYFLGALLSVPTTFLFAKEFNHAVLASPVMGFFAAGVT
                     TAFAIYFPELFPTKIRATAQGFCFNFARFFSAAGPLLAGVLTSAHGSFAPAIATIGSI
                     YFVGLIVLYFARETKGQALPD"
BASE COUNT          490 a          795 c          691 g          554 t
ORIGIN      
        1 tcatggtcag cgagcgatag tcggtgccgt tgaacggcag cggctcctgc accggcggat
       61 tatttgaata gttcgacggt gtcggcgcct ggtaggaggt gtcttgatac tgcatcgagc
      121 cgccgcccgt tgccagcgcc ggagttctgg atgctttgta tttccggtaa agaaaatacg
      181 ccaaaccgcc gaacaaaaga atttctatca tcccgaaacc actgccgccc ataccgccgc
      241 ccatgccgcc cataccgctg gcgccggcta agcccgagaa cagcatggag cccaaaaagc
      301 cgccgagcac cgcggtgccc aggccgcgca tgaaaccgcc cgattgcggc atcatcgacg
      361 ccggttggcg cgcctgttgt gccggcatgg catcctgtct ttgtggtgac gtcgggttcg
      421 ccgcccggct cggcgcctgg gagctgcgcg acccgcgaaa accaccggaa cggccgccgc
      481 cggcgcgggc atcggctaaa gtctcgaggg caatttgggt cagcgcgcct agcgcgaaaa
      541 gacccaccgc aatgacaaac gatttacgct tggttatcga cataggttta gttcctccta
      601 ggaattcatt ctcgatgcaa ggagtctaac catgggtata aatcgagtca atgatctatt
      661 tttaataaat ccgcggccac aaagcccggc caagaacccc cacccgccgc ctttttcatt
      721 gcctttttcg cccctttgtg gcacttgagc aaaccatggc tgaacccaag tggtaccaag
      781 agctaacgcc ctatcaatgg cgcgtcctcg tctgcgcctg cctcggttgg gctctcgaca
      841 tcatggacgg ctatctctat gcgatcattc tattcccggc gatgagcgat ttgctcggca
      901 ccagcgagcc ggcggtgatc ggctggtacg gtggcatcgt tctgagcatc ttcatgatcg
      961 gctgggcttt gggcgggctg attttcgggc ccatcgccga ccgttacggc cgggccaaaa
     1021 ccatggcgat cacgatattg atctacgcaa ctttcaccgg actatgcggc atcgccaata
     1081 gctggtggga actggcgatc ttccgcttcc tcaccggctt aggcatcggc ggcgagtggg
     1141 ccgccggcgc cgcgctcatc gccgagagtt ttccggagaa gtcgcgcgcc aaagccgccg
     1201 gcatcatgca agcctcgggc ggcatcggtt tctttctcgc caccgcgctt tatctaatca
     1261 tcggtcccta cggttggcgc tgggtcttcg ccttcggcat cctgcccgcc atcgtcgctt
     1321 tttacgtgcg ttactcgttg gaagaaccgg cgcgttggac caatgccaaa cagactggca
     1381 atccctaccc agctttattc gctcccgcgg tgcgccgcga cttgctggtc ggcaccagcc
     1441 tcgcggtggt cgccaacttc ggctatcaag gcgcggtgca atgggtgccg agctggatcg
     1501 ccgccatgct gcacgcccag ggcacccgcg cggtgatccc acaggtaagc ttgatcacta
     1561 cgacactcac caccggaggg atcattggct gtctgtgcat gccgctcatc gccgagcgct
     1621 ggggcagaaa aggcgcgctg tttatttact tcctcggcgc gttactcagc gtgccgacaa
     1681 cgtttctgtt cgccaaggag ttcaaccacg ccgtgctcgc ctcgccggtg atgggcttct
     1741 tcgctgccgg cgtcaccacc gccttcgcaa tttacttccc ggaactgttt ccgaccaaga
     1801 tccgcgccac cgcccaaggc ttttgcttca acttcgcccg cttcttctcc gccgccggcc
     1861 ccctgctcgc cggcgtgcta acatcagccc acggctcctt cgcgccggca atagccacca
     1921 tcgggtcgat ctatttcgtc ggcttgatcg ttctgtactt cgctcgcgaa accaaaggcc
     1981 aagcgttgcc ggactgaaac atcgggctgt tgagaattgg ttttgaaaat actattcacc
     2041 acgaagtggt ccatgagctt gcgcgcgcct aaagagcatg aaaatggttt gtattcgcag
     2101 aacatgctcc cctctcgatt cgtcattctc gcgcacgcgg gaatccaggt ttgttccgcg
     2161 ccgaattagc ttggataccc tgctttcgcg ggtatgacgg agccccgcag gcacttcgat
     2221 gtgcatatta taccctcaca tgtattttcg aaggaggcct agcgcggcaa agccgcaagc
     2281 gaaattcgga atatctccgc aaaggcgcta agctcgcaaa gttgacgggc ctatgctcgt
     2341 catcccgagc ggacgtgagg gatctgagac agatttctcc ctgcggtcga aatgacaaca
     2401 actccgagct tggcgtgctt tacgtcttgg cgggagtcaa tcccctcttc gggtatccca
     2461 gatcacccta aattttgctc gagccgcgca aattgttaac aatactagca cgaaggacac
     2521 gaacaatacg
//
LOCUS       DATIRS010000632         2869 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_441065, whole genome shotgun sequence.
ACCESSION   DATIRS010000632 DATIRS010000000
VERSION     DATIRS010000632.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2869
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_441065"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..561
                     /locus_tag="VLM90_07980"
     CDS             <1..561
                     /locus_tag="VLM90_07980"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HSQ12941.1"
                     /translation="QYLLFLDTTVAAPPPFWSEPMFADPRKPVVGVTWDEAVAYCRWL
                     SVRQGQQYRLPTEAEWEYAARGGREGALFPWGDEAPSVRAAIGFDAATGGPAPVGVNP
                     PNDFGLHDMSEGVHEWCSDYYDYNYYRYSPEHNPQGAVSGERRASRGGSWRHQIKFAR
                     CAARSSLPPSFRYADYGFRVAMTMAR"
     gene            753..1739
                     /locus_tag="VLM90_07985"
     CDS             753..1739
                     /locus_tag="VLM90_07985"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12942.1"
                     /translation="MTRWKITYGFFICSVVSLFIVAPSRAIDNIRVACPSLSSTSVFS
                     LVIAQKEGYFREEGLNVELLSIRGEIAIRTVLAGDVYFFTNAGSALAAGVRGIPVRIV
                     TVFQDKPNWDLIAQPEVKSIAQLRGKNIAVMSPEGSLAVVAREMLRKNGLDPTKDVNL
                     VTMGGDEVRFPALQTRSIQATLFNTAMSIKAQKEGFIKLGNASEYANLIEGGLATSQD
                     KIQQQPEKIHRFVRAALKGLIFYVSKREAAVKYMVDTLRMKDQELVSSIYDILTPLAL
                     RAGFSDEKVLQTMIDEMKRTTKVQRDIKVPDIFHLSFVKKANDEIKASGWKP"
     gene            complement(1830..2801)
                     /locus_tag="VLM90_07990"
     CDS             complement(1830..2801)
                     /locus_tag="VLM90_07990"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12943.1"
                     /translation="MKRFIAKLVLIAVFGLFVPPALAFAADKITMSSTNPTALEMDQM
                     VARDKGYFARENLEVDVTYMTPDLVIKALLAGTVDLARSGTHFGLIAATRGGELKVIG
                     GSTYGYAYQVIGQPQYKTLADLKGQKIAGASVASITTTIFKDVMQRQGIPPSAYTILS
                     LGGSGERFQAVASGQVAASLAEAPPFNFRSIDAGRKVLLNYSDEIKNLQYGSYFASNK
                     SLTQMRPVITRFMRAIGQAMRWLNDPANEKEAVRIMMDRLKIDETIAARTFKFMVPEN
                     HSFRGEGLVDPVGLNEMIRLLAMDNLIPERKPWETFVDAGFLPVAAK"
BASE COUNT          595 a          770 c          879 g          625 t
ORIGIN      
        1 cagtacttgt tgtttctcga taccaccgtt gccgcgccgc cgccattttg gtccgagcca
       61 atgtttgccg atccgcgaaa gccggtggtg ggcgtgacct gggatgaagc ggtcgcgtat
      121 tgccgctggc tcagtgtgcg ccaaggccag cagtatcgat tgccgaccga agctgaatgg
      181 gagtatgcgg cgcgtggcgg ccgcgaaggt gcgctctttc cttggggcga tgaggcgccc
      241 agcgtgcgcg cggctattgg cttcgatgcg gccaccggtg gcccggcacc agtcggcgtc
      301 aacccgccca acgacttcgg gcttcacgac atgagcgaag gcgtgcacga gtggtgcagc
      361 gactattacg actacaacta ctatcgctac tctcccgagc acaatcccca gggcgcggtt
      421 tcaggcgagc gccgggcgtc gcgcggcggc tcgtggcgcc atcagatcaa gttcgcccgt
      481 tgcgcggcgc gcagctcgct gccgccgtcg ttccgttacg ccgattatgg ttttcgcgtg
      541 gcgatgacaa tggcgcgata gtttgccgac ccgctcgaag ggttccctcc atgcaagcgc
      601 ggcctgcctc gcgaagagtc cggcgcggct gggctgtttt tggcgaaatg tttttgtttg
      661 accgaagtca tcgataaaga taaatagcga agaccaaact gcgcgcgccg agagcaaggc
      721 aaattaacct ggacgaggaa aggagcttta gcatgacacg ctggaaaata acctatgggt
      781 ttttcatttg ctcggtcgtt tctctcttca tcgtcgcgcc gtcgcgcgct attgacaata
      841 tccgggtggc ttgtccttcg ctgagtagta cttcggtatt ttccctggtc attgcgcaaa
      901 aggaaggtta ctttcgagaa gaaggtctta acgtcgagct gctcagcatc cgcggcgaga
      961 tcgcgatccg cacggtgctg gccggggacg tctatttttt taccaatgcc ggcagcgcgt
     1021 tggcggcggg ggtcagaggc attcccgtca ggattgttac ggtttttcag gataagccca
     1081 attgggattt gatcgcgcaa cccgaggtca agtcgatagc ccagttgcgc ggtaagaaca
     1141 tcgcggtgat gtctccggaa gggtcgcttg cggtggtcgc gcgcgaaatg ttgcgtaaaa
     1201 acggcttgga cccaacgaag gatgtcaatc ttgtgacgat gggaggtgac gaggttcgct
     1261 ttccagcgct ccagacccga tccatacaag cgacgttgtt caacacggcc atgagcatca
     1321 aggcgcaaaa ggagggcttt atcaagctcg gaaacgcgag cgagtatgcc aacttgatcg
     1381 aaggcggatt ggcgacttcg caagacaaga tccagcaaca gccggaaaaa atccatcgct
     1441 tcgtccgcgc cgcgctgaaa gggctgattt tttacgtcag caaacgggaa gcggcggtca
     1501 aatacatggt ggacaccttg cgcatgaagg accaggagtt ggtcagttcg atctatgaca
     1561 ttctcacgcc gctcgcgctc cgggccggat tcagcgacga gaaggtgctg cagaccatga
     1621 tcgatgagat gaaacgaact accaaagtcc agcgcgacat caaagtcccc gacatcttcc
     1681 atctgagctt cgtgaaaaaa gccaatgacg aaatcaaagc gagcggctgg aagccatgac
     1741 gcggggccgc gctagcaggt tgttcaaatc gttcaaacag ctcaagccgt tcaaaacgtc
     1801 agaataggag gctgaaaact ttcgcgcggt cattttgccg cgaccgggag aaatccagca
     1861 tcgacgaagg tttcccaggg cttgcgttcg gggattagat tatccatcgc gagcaggcgg
     1921 atcatttcgt tcaatccaac cgggtcgacc aggccctcgc cgcggaagga gtggttttcc
     1981 gggaccatga atttgaacgt gcgcgcggcg atggtttcgt cgatcttcag gcggtccatc
     2041 atgatccgca cggcttcttt ttcattggct ggatcgttca accagcgcat cgcttggccg
     2101 atggcgcgca tgaagcgggt aatcaccggg cgcatttgcg ttagcgattt gttcgaggcg
     2161 aaataggagc cgtactgcag gtttttgatc tcgtcggaat agttcaagag aactttgcgg
     2221 ccggcgtcga tggagcgaaa attaaacggc ggcgcttcgg cgagggacgc ggcgacctgg
     2281 cccgaggcga ccgcttgaaa tctttctccg ctgccgccga gagaaaggat cgtgtaggcc
     2341 gacggcggga tgccctggcg ctgcatgaca tccttgaaga tcgtcgtcgt gatgctcgcc
     2401 accgacgcgc cggcgatctt ctggcctttt aaatcggcga gggttttgta ctgcggctgg
     2461 ccgatcacct gataggcgta gccataagtc gagccgccga tgacttttaa ctcgccgccg
     2521 cgcgtcgccg cgatcaagcc gaagtgggtg cccgatctgg ctagatcgac ggtgccggca
     2581 agcagcgctt tgatcacgag gtcgggcgtc atgtaggtga catcgacctc gagattttcc
     2641 ctagcgaaat atcccttgtc ccgcgccacc atttgatcca tttccaacgc ggttgggttg
     2701 gtcgagctca tggtgatttt atcggcggcg aaagctagcg ccggcggtac gaagaggccg
     2761 aataccgcga ttaagacgag cttggctatg aatcgtttca ttgtcctgtc ctccgctacg
     2821 gattttggat tttggattgt cggatcgagg catcgattta aggggcgaa
//
LOCUS       DATIRS010000633         2123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1424303, whole genome shotgun sequence.
ACCESSION   DATIRS010000633 DATIRS010000000
VERSION     DATIRS010000633.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2123
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1424303"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..406
                     /locus_tag="VLM90_07995"
     CDS             <1..406
                     /locus_tag="VLM90_07995"
                     /inference="COORDINATES: protein motif:HMM:NF016447.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12944.1"
                     /translation="ATLYDGRTGEPFDGKVTVGVMYIMKLHHLVDDKIHARSTGPYSL
                     VTQQPLGGKAQFGGQRLGEMEVWALEAYGAAYTLQEMLTVKSDDVVGRTRMYEAIVKG
                     DNLLEPGLPESFNVMVKELQSLGLDVDLVEEK"
     gene            453..>2123
                     /gene="rpoC"
                     /locus_tag="VLM90_08000"
     CDS             453..>2123
                     /gene="rpoC"
                     /locus_tag="VLM90_08000"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR02386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HSQ12945.1"
                     /translation="MEDLFNLFEKPKNPLSFNAIKVSVASPEKIRSWSHGEVKKPETI
                     NYRTFKPERDGLFCAKIFGPTKDYECNCGKYKRMRHRGVVCEKCGVEVIQSKVRRERM
                     GHIELATPVVHIWFLKSLPSRIGALLDMSLKDIEKVLYFESYIVVDPGETPLQYKELL
                     TEARYRKAVEEYGGKFVAGMGAEAVRKLLKEIDIPKVADELRQEMRDANSEVRRKKMA
                     KRLKVLTAFRTSGNRPEWMVMEVIPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRN
                     NRLKRLMELSAPDMIIRNEKRMLQEAVDALFDNGRRGRAITGQNRRPLKSLSEMLKGK
                     TGRFRQNLLGKRVDYSGRSVIVVGPELRLHQCGLPKKMALELFKPFIYNKLEERGHVT
                     TIKSAKKMVERELPEVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLH
                     PLVCAAYNADFDGDQMAVHVPLSVEAQVEARALMMSTNNILSPANGKPIIVPSQDIVL
                     GLYYATLQYDHEPGEGMTFANVNEIRQALDNKVLSLHAKINCRYDTVDD"
BASE COUNT          487 a          615 c          616 g          405 t
ORIGIN      
        1 ggcgacgcta tatgatggcc gcaccggcga gcccttcgat ggcaaggtga ccgttggcgt
       61 gatgtacatt atgaagctgc atcatttggt cgacgacaag atccacgccc gttcaaccgg
      121 gccctactcc cttgtcaccc agcagcccct gggtggtaag gcacagttcg gcggccagcg
      181 cttgggtgaa atggaagtct gggcgctgga agcttatggc gccgcgtaca cgttgcaaga
      241 gatgctcacg gtgaagtccg acgacgtggt cgggcgcacg cgcatgtacg aagcgatcgt
      301 caaaggcgat aatttgctcg aaccggggct ccctgaatct ttcaacgtca tggtgaaaga
      361 gctccaaagc ctcggtttgg atgtcgatct cgttgaagaa aagtaggtag ccccagtacg
      421 gctgtgccgc taacaccgga ggtgatcctg ttatggaaga tctgttcaat ttattcgaaa
      481 aaccgaagaa tccgctaagt tttaacgcga tcaaagtttc cgtcgcttcg ccggaaaaga
      541 ttcgctcctg gtcccatggc gaagtaaaaa agcccgagac gatcaactac cggactttca
      601 agccggaacg ggatggcctg ttctgcgcaa agatcttcgg accgaccaaa gactacgaat
      661 gcaactgcgg caagtacaaa cgcatgcgcc atcgcggcgt ggtctgcgag aagtgcggcg
      721 ttgaagtcat ccagtccaaa gtgcgccgcg agcgcatggg gcatatcgag ttggcgactc
      781 cggtcgtgca catttggttt ttgaagagcc tgccgagccg catcggcgcg ctgctcgaca
      841 tgtcgcttaa agacatcgaa aaggtgctct acttcgagtc ctatatcgtc gttgatccgg
      901 gcgagacacc actgcagtac aaagagcttc tgaccgaagc gcgctaccgc aaggcggtcg
      961 aagaatacgg cggcaagttc gtcgccggga tgggcgccga ggcggtgcgc aagctgctca
     1021 aagagatcga tatccccaag gttgccgacg aattgcgcca ggaaatgcgc gatgccaatt
     1081 ccgaagtgcg gcgcaaaaaa atggccaagc ggctcaaagt tttgaccgct ttcaggacat
     1141 cggggaatcg tcccgaatgg atggtgatgg aagtaattcc ggtgattccg ccggacttgc
     1201 gccctctagt ccctctcgac ggcggccgct tcgcgacgtc cgatttgaac gacctctatc
     1261 gccgcgtcat caatcgtaac aaccggctca aacggctgat ggaattgagc gcgccggaca
     1321 tgatcattcg taacgaaaag cgcatgctcc aagaagcggt cgatgcgttg ttcgacaacg
     1381 ggcggcgcgg ccgggcgatt accggccaaa accgccggcc gctcaaatct ttgagcgaaa
     1441 tgctcaaagg caaaaccggc cgcttccgcc agaacttgct cggcaagcgt gtcgactatt
     1501 cgggccgttc ggtcatcgtc gttggcccag aactgcgctt gcatcagtgc ggtctgccga
     1561 aaaagatggc cctcgagctt ttcaaaccgt ttatctacaa caagctcgaa gagcgcggcc
     1621 atgtaacgac aattaaaagc gccaagaaga tggtcgagcg cgagctccca gaggtttggg
     1681 atatacttga cgaggtcatc cgcgagcatc ccgtgttgct caaccgcgcg ccgacgctgc
     1741 atcgcttggg catccaggcc ttcgagccga tcttgatcga aggcaaggcc attcagctgc
     1801 acccgctcgt ctgcgcggcc tacaacgccg acttcgacgg cgaccagatg gcggtgcacg
     1861 tcccgctctc ggtcgaggcg caggtcgaag cccgcgccct catgatgtcg accaacaaca
     1921 tcctgtcgcc ggccaacggc aagccgatca tcgtgccgag ccaggacatc gtgctgggtc
     1981 tctactacgc gaccctgcag tacgatcacg agcccggcga gggcatgacc ttcgcgaacg
     2041 tcaacgaaat ccgccaggcg ctcgacaaca aggtcctgtc gctgcacgcc aagatcaact
     2101 gccgctacga cacggtggac gac
//
LOCUS       DATIRS010000634         2203 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_538557, whole genome shotgun sequence.
ACCESSION   DATIRS010000634 DATIRS010000000
VERSION     DATIRS010000634.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2203
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_538557"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..459
                     /locus_tag="VLM90_08005"
     CDS             <1..459
                     /locus_tag="VLM90_08005"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12946.1"
                     /translation="LFAVTGLVLILTLLLCRYIVSSKFGRVLAAIRDAESRTMFSGYN
                     TRDYKLFAWTVSALLCGIAGALYVPQVGIINPSEMSPANSIEIAIWVAVGGRGTLAGA
                     ILGAAIVNGAKSYFTVAWPEFWLYFLGALFVVVTVYLPNGVIGMARRGDK"
     gene            456..1136
                     /locus_tag="VLM90_08010"
     CDS             456..1136
                     /locus_tag="VLM90_08010"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSQ12947.1"
                     /translation="MTSETLGLHGGIESTGISHVVQAEAIDVSHKAILYLEGVTVSFD
                     GFRALNDLSFSIDVGELRCVIGPNGAGKTTMMDVITGKTRPDKGTVFLGQTLDLTQLP
                     EYEIARLGVGRKFQKPSVFENHTVYENLELAIKSPKGVWDTLFHRRDSAEEDRIDAML
                     KQINLKNRMRDQAGLLSHGQKQWLEIGMLLIQEPQVLLLDEPAAGMSDEETERTAELF
                     LSLEGKHS"
     gene            1155..1280
                     /locus_tag="VLM90_08015"
     CDS             1155..1280
                     /locus_tag="VLM90_08015"
                     /inference="COORDINATES: protein motif:HMM:NF023816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12948.1"
                     /translation="MAFVASLARKVTVLHEGSVLLEGTMDTVQNDERVIEVYLGR"
     gene            1283..2032
                     /locus_tag="VLM90_08020"
     CDS             1283..2032
                     /locus_tag="VLM90_08020"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ12949.1"
                     /translation="MLQIEGLNHYYGGSHTLSDISFEVAAGTCTAVLGRNGVGKSTLL
                     KSLMGVERVRSGTITLDGQDITHASPHARARLGLGYVPQGREIFPRLTVEENLLTGLA
                     GQKTREIDPEIYEMFPVLKEMRQRRGGDLSGGQQQQLAIGRALLTKPKLLILDEPTEG
                     IQPSIIQQIQKVLHRVKGARRESPELEAIKAAVRRIKEEGRIAILLVEQYLDFAREIC
                     DYYCVLDRGAIIMEGDRERLLGDDVKRWLSV"
BASE COUNT          457 a          624 c          678 g          444 t
ORIGIN      
        1 ctgtttgcgg ttaccgggtt ggttctgatc ctgaccctgc tgctgtgccg ctacatcgta
       61 agttccaagt ttggccgggt gctcgcggcg attcgcgacg ccgagtcgcg cacgatgttt
      121 tccggctaca atacccgcga ctacaaactt ttcgcctgga cagtgtcggc gctcttgtgc
      181 gggattgccg gcgccctcta cgtgccccag gtgggtatca tcaacccgag cgagatgtcg
      241 ccggcgaatt cgatcgaaat cgccatctgg gtggccgtgg gcggccgcgg cactctcgct
      301 ggagcgattc tcggcgccgc catcgtcaac ggtgccaaga gttattttac cgtcgcctgg
      361 ccggagttct ggttgtattt tctcggagcg ctattcgtcg tggtcaccgt ctacttgccc
      421 aatggcgtga ttggcatggc gcggcggggt gacaaatgac gagcgagacc ttgggactcc
      481 acggcggtat cgaaagcacc ggtatcagcc acgtggtcca ggccgaagcg atcgacgtct
      541 cccataaggc gattctttat ctcgaaggcg tgaccgtcag tttcgatggt tttcgcgccc
      601 tcaacgattt gtctttttcc atcgatgtcg gcgaactgcg ctgtgtgatc ggtcccaacg
      661 gcgccggcaa gacgaccatg atggatgtca tcaccggcaa aacgcggccg gacaagggta
      721 cggttttcct cggccagacc ctcgatctta cccagttgcc cgagtacgag atcgcgcgcc
      781 tcggtgtcgg ccgcaagttc caaaaaccgt ccgtgtttga aaaccacacc gtgtacgaaa
      841 atctcgagct cgcgatcaaa agcccgaaag gcgtgtggga taccctattt caccggcgcg
      901 attcggcgga agaggatcgc atcgacgcaa tgctcaagca aataaatctc aagaaccgca
      961 tgcgcgatca agcggggctt ttgtcgcatg ggcaaaagca gtggcttgag atcggtatgt
     1021 tgctgatcca ggagccccaa gtgctgctgc tcgacgagcc tgccgcgggc atgagcgacg
     1081 aagagaccga gcgcacggcg gaactgtttt tgtcgttgga gggtaagcat tcttgagtcg
     1141 ttgtcgagca cgacatggca ttcgtcgcgt ccctggcacg caaggtgacg gtgctccacg
     1201 agggcagcgt gctgctggaa ggaacgatgg ataccgtgca gaacgacgag cgggtcatcg
     1261 aagtttatct cgggcgctga ttatgctgca aattgaagga ttaaatcact actatggcgg
     1321 cagccacacg ttgagcgaca tctccttcga agtcgccgcc gggacatgta ccgcggtgct
     1381 cggccgtaac ggcgtcggca aaagcacgct gctcaaatcg ctgatgggcg tcgagcgcgt
     1441 gcgctccggc acgatcacgc tcgacggcca agatattacc cacgcctcac cgcacgcgcg
     1501 ggcgcgcctc ggtctcggct acgtgccgca gggacgggag atatttcccc ggctcacggt
     1561 ggaagaaaac ctgttaaccg gattggccgg gcaaaaaacc cgggaaatcg atccggagat
     1621 ttacgaaatg ttccccgtgc tcaaggaaat gcgccaacgg cgcggcggcg atctctcggg
     1681 cggccagcag caacagctgg ccattggacg ggcgctgctc acgaagccca agctgctgat
     1741 tctggacgag ccgacggagg gaatacagcc atcgatcatt cagcagatcc agaaagtgct
     1801 gcatcgggtc aagggcgcaa gacgggagtc gccggagctc gaagcgatca aagccgcggt
     1861 gcggcgcatc aaagaggaag gccgcatcgc catcctgctg gtcgagcaat acttagactt
     1921 cgcccgcgag atttgtgact actattgcgt gctcgaccgc ggtgccatca tcatggaagg
     1981 agaccgcgag cggcttctcg gtgacgacgt gaagcgctgg ttgagcgtgt gagcgctcgt
     2041 cataccatgc accgcaagaa aaaagtttcg cttcgaggtg tctcgaacca agttgccgat
     2101 actgtcgccg gcagcagcaa gggaggcgag ggtggttatg cacgatcaat tcgccgagac
     2161 catgacgaca tttccattgt tgcagggttt tactctccag ggc
//
LOCUS       DATIRS010000635         2148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1227879, whole genome shotgun sequence.
ACCESSION   DATIRS010000635 DATIRS010000000
VERSION     DATIRS010000635.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2148
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1227879"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1107
                     /locus_tag="VLM90_08025"
     CDS             <1..1107
                     /locus_tag="VLM90_08025"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HSQ12950.1"
                     /translation="GSAAYGRLWFNIRYVTNMMGKAEMANYCFFPKNGDPAVVTRPGH
                     SLAGGMLARTAVRNVIVGRPSVLDAIVNEIKERGYDQGRIGIVEYDPYTSIPKNHWDF
                     FTGQLPQAEFPFVTKEFIAMRLLKSAEEIAFLEKSAEFGDAGLRAMQERVKPGMTEGE
                     VFGIVHEAVLKAGGEMGMIQIGSCSMLDPDVNDQRPRPVQRVIGARDIINNELGIFYN
                     GYEAQCGRPVLTGEPTAEYQAMFEVALEGYQRLVPTLYAGKSSDDSIAAMQFIKDSEF
                     EFYGGFLQGMLGANPRHEPQIGFDRVQSAEDRYLFDADGRLVYKVGHVFTLQMHIVDK
                     SHNRGLFVGDFFAIEKNGPRCLNKFPLELVRTRG"
     gene            1274..>2148
                     /locus_tag="VLM90_08030"
     CDS             1274..>2148
                     /locus_tag="VLM90_08030"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ12951.1"
                     /translation="MATTPGGGFDAYSRMIARHMSKHIPGTPNFVIENMPGAAFLIGT
                     NYLYRQAKPDGLTLGNWIGNLVVHQVLGRSGVEFDARKFEYVGAPVKNHDTCVMSRAS
                     GIDSAQKWLSSPTPVKIGATPPGSSAYDNVAILREAIGVPTQIVSGYKGTAEIRLAID
                     ANEVSGICGLAWASVKVTWRKQLESGDVKVVLQNTPAAHLELPDVPTAVSLAKTDMGK
                     KLLQLGLHDVGAITYIYSFPPATPKDRVQILRRAFHETMKDAEFVAEAKKGNFELTPV
                     AGEELERIVHGFFKA"
BASE COUNT          454 a          596 c          658 g          440 t
ORIGIN      
        1 ggctcggccg cctacggccg gctctggttc aacatccgct atgtcaccaa catgatgggc
       61 aaggcggaga tggccaacta ctgtttcttt ccaaagaacg gcgatccggc ggtggtgacg
      121 cggccgggtc attcgctcgc cggcggcatg ctggcgcgca cggcggtgcg caatgtcatc
      181 gtcggcaggc cgagcgtgct cgatgccatc gtcaatgaga tcaaagagcg cggctatgac
      241 caggggcgca tcggtatcgt cgagtatgat ccctatacat cgattccgaa aaatcattgg
      301 gacttcttca ctggccagtt acctcaggcc gagtttccct tcgtgaccaa ggaattcatc
      361 gccatgcgct tgctcaagag cgccgaagag atcgcatttc tggagaagtc agcggagttc
      421 ggcgacgccg gactgcgcgc catgcaagag cgcgtcaagc cggggatgac cgaaggcgaa
      481 gtgttcggca tcgttcacga ggcggtctta aaagccggcg gcgagatggg catgattcaa
      541 atcggctcct gctccatgct cgatcccgat gtcaacgatc agcggccgcg gccggtgcag
      601 cgcgtcatcg gcgcgcgcga tatcatcaac aatgagctgg ggattttcta caacggttat
      661 gaagcccaat gcggccggcc ggtgctgacc ggcgagccca ctgccgagta tcaggcgatg
      721 ttcgaggtcg ccctggaagg ctaccagcgg ctggtgccga cgctttatgc cggcaagtcg
      781 agcgatgact cgatcgccgc catgcaattc atcaaggact ccgagttcga gttctacggt
      841 ggctttctcc aaggcatgct cggcgccaac ccgcgtcacg agccgcagat cggcttcgac
      901 cgggtgcaga gcgccgaaga ccgctatctc ttcgatgccg atggacggct ggtctataag
      961 gtcggccatg ttttcacttt gcagatgcac atcgtcgaca agagccataa ccgcggattg
     1021 tttgttggcg acttcttcgc cattgaaaaa aacggtccac gttgtttgaa taaattcccg
     1081 cttgaattgg tgcgcacgcg tggttagagc tggcggggtt ccggtagaga tcatcattaa
     1141 caaagcgacg tgaacgatgt catttggcaa gcgcttgggg atcattttct tggtactggt
     1201 cgcggcccat gtgttaagtc ggtagacggg ttacgcggag gatttttaca aaggcaaaac
     1261 cattcggatc gtcgtggcga ccacgccggg cggcggtttt gatgcgtact cgcgcatgat
     1321 cgcccgacac atgagcaagc atattcccgg cactccaaac tttgtgattg agaacatgcc
     1381 gggagcggcg ttcttgatcg gcaccaatta tctttaccgc caggcgaaac cggacggact
     1441 gacgctcggc aactggatcg gcaacttggt ggtgcatcaa gttctcggcc gcagtggcgt
     1501 cgagttcgac gcgcgcaaat ttgaatatgt cggcgcgccg gttaagaacc atgacacctg
     1561 cgtgatgtcg cgtgccagcg gcatcgacag cgcgcagaag tggctgtcgt cgccgacacc
     1621 ggtgaagatc ggcgcgacgc cgccagggtc gagcgcctac gacaatgtcg ccatactgcg
     1681 cgaagccata ggtgttccga cgcaaatcgt ttccgggtac aagggcacgg cggagatccg
     1741 tctcgccatc gacgccaatg aagtttccgg tatttgcggc ctggcctggg cttcggtgaa
     1801 agtgacttgg cgcaaacagt tggagtcggg cgacgtcaaa gtcgtcttgc aaaatacccc
     1861 ggcggcgcac ctcgaactgc cagacgtgcc caccgccgtg agtctggcga aaaccgatat
     1921 ggggaagaag ctgctccagc tggggctgca cgatgtcggc gcgattactt acatttattc
     1981 cttccctccg gcaacaccga aagaccgagt gcagatcttg cgccgggcgt ttcatgaaac
     2041 catgaaagac gcggagttcg ttgccgaggc gaagaaaggc aacttcgaac tgacgccggt
     2101 ggctggcgaa gaattggaac ggatcgtcca tggcttcttt aaagccga
//
LOCUS       DATIRS010000636         1617 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_736248, whole genome shotgun sequence.
ACCESSION   DATIRS010000636 DATIRS010000000
VERSION     DATIRS010000636.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1617
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_736248"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1592
                     /gene="recG"
                     /locus_tag="VLM90_08035"
     CDS             <1..1592
                     /gene="recG"
                     /locus_tag="VLM90_08035"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:NF008168.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HSQ12952.1"
                     /translation="LPSSVASRMQLSAIPEALSQLHQPSLETSVAALNGASSPAHRSV
                     IFDELFYLQLGLGLRKRSRTQSRGQPVNLTGGKLVQRMRELLPFKLTGAQDRVFGEIA
                     SDMAGEQPMQRLIQGDVGSGKTMVAWLASLRTIEQGYQALWMAPTEILAEQHFRGLSG
                     YARTLGVTAALLTAATTAKERKELLPRIERGEVQFLVGTHAVIQEDIHAPRMGLGVID
                     EQHRFGVAQRLSLRQLVAGKDSLSSTSHEPHMLLLSATPIPRSLALVLYGDMEVSFVD
                     AMPPGRTPVQTKVFNERERKQVYTTVLDQLKKGHQAFVVLPLVEPSEQLQQVKDATQM
                     AEKMRQTLFKDFGIGLVHGRMKADERDQTMRAFRDGKLGILVATTVIEVGIDIANATV
                     MVIEHAERFGLSQLHQLRGRVGRGQAPGYCLLVNRGTGSAVAAERLQVMVKENDGFKI
                     AEADLKLRGPGELLGTRQSGLADFRLANLTRDTQLLAAARQEALAWLEKDPQLKSKES
                     AGMREVLKHRWGKRLQLGAVG"
BASE COUNT          326 a          472 c          521 g          298 t
ORIGIN      
        1 gattaccgag cagcgtggcg agccgcatgc agctaagcgc gatcccggaa gcgctcagcc
       61 aattgcacca gccgtcgctg gaaaccagcg tggccgcctt gaacggcgcc agctcgccgg
      121 cgcaccgcag cgtgatcttc gacgagctat tttatctgca actggggttg gggctgcgta
      181 agcgctcgcg cacacagagc cgcggccagc cggttaattt gactggcggc aaactggttc
      241 agcgcatgcg cgaattgttg ccgttcaaac tcaccggcgc gcaggatcgg gtatttggcg
      301 agatcgcctc cgacatggcg ggcgagcagc cgatgcaacg cttgattcaa ggcgatgtcg
      361 gttcgggcaa gaccatggtg gcgtggttgg cgtcgctgcg gaccatcgag caaggctatc
      421 aagcgctctg gatggcgccc acggaaattc tcgccgagca gcactttcgc ggtttgtcgg
      481 gctacgccag gactttggga gttacggcgg cgctgctcac ggcggcgacg acggcaaaag
      541 agcgcaagga attgctgccg cgcatcgagc gcggcgaagt gcagtttctc gtcggcaccc
      601 acgcggtgat tcaagaagat atccatgcgc cgcgcatggg gctgggcgtg attgacgaac
      661 agcaccgctt cggcgtggcg cagcgtttgt cgctgcgcca actggtggcc ggcaaggatt
      721 ccctgtcttc gaccagccat gagccgcata tgctgttgtt gagcgcgacg ccgatcccgc
      781 gcagtctggc gctggtgctg tatggcgaca tggaggtttc cttcgtcgat gccatgccgc
      841 cggggcgcac gccggtgcaa accaaagtgt tcaacgaacg ggagcgcaag caggtttaca
      901 cgacggttct cgaccagttg aaaaaaggcc atcaagcctt tgtcgtcctg ccgctggtcg
      961 aaccctccga acagctccaa caagtcaagg acgccaccca aatggcggaa aaaatgcgcc
     1021 aaactttatt caaagacttc ggcatcggcc tagtgcatgg ccgcatgaaa gcggacgagc
     1081 gcgaccaaac catgcgcgcc tttcgcgacg gcaagttggg gattctcgtc gccaccaccg
     1141 tcatcgaggt cggcatcgac atcgccaacg ccacggtcat ggtcatcgag catgccgagc
     1201 gcttcggctt gtcgcagctc catcaactac gcggacgggt cgggcgcggc caggcgccgg
     1261 gctattgctt gctcgtcaac cgtggcaccg gtagtgcggt cgccgcggaa cgattgcagg
     1321 tcatggtaaa agaaaacgat ggcttcaaaa tcgccgaagc cgacttgaaa ctgcgcggtc
     1381 ccggcgaact cctgggcacg cggcagtcgg gtttggccga ttttcgttta gccaatctga
     1441 cgcgcgacac gcagttgctc gccgccgcgc gtcaagaagc cttagcttgg ttagaaaaag
     1501 atccgcagct gaaaagcaaa gagtccgccg gcatgcggga agttctcaag catcgctggg
     1561 gcaagcggtt gcagttgggg gcggtggggt aatgttgtgt gaattgccgc gcctgga
//
LOCUS       DATIRS010000637         1540 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_244289, whole genome shotgun sequence.
ACCESSION   DATIRS010000637 DATIRS010000000
VERSION     DATIRS010000637.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1540
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_244289"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..644)
                     /locus_tag="VLM90_08040"
     CDS             complement(<1..644)
                     /locus_tag="VLM90_08040"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12953.1"
                     /translation="MIVLIVSLALAATAQAQLRKINIPYTATSPYQAVLIVAKEVGLF
                     KKYNLDPALVFVTGGSLGIQAMLGGDVAMALSDGSASVASKISGVDVVIIASLLNTFP
                     YSLISLPEIKKVDQLRGGTIAVSRFGSATDLSVKLALARVGLNAEKDVTLLQIGVQTA
                     RYAAMLSKNVQATIITPPFTLTARKAGMNTLIDMSELNIPFQLTGLLALRPYLK"
     gene            complement(741..>1540)
                     /locus_tag="VLM90_08045"
     CDS             complement(741..>1540)
                     /locus_tag="VLM90_08045"
                     /inference="COORDINATES: protein motif:HMM:NF004868.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="citryl-CoA lyase"
                     /protein_id="HSQ12954.1"
                     /translation="KPKTGGFMADVPKLVSALGRAELDKIYVRNYDLNKDLLGKISFS
                     QMVCLMLQGRLPTADEGKMIDSMLIVLVDHGMTTGAAAARMTFHSAPEAIQGAVAAAI
                     LGAGSVHLGSSEYCAKMLSDALAKEAKDADLDAVALKTVERRLANNQLIPGIGHGIHT
                     GGDPRADRLFEIAQETKVYGRNCELLKKIGKIADQKVGKHLPVNVTGAIAAISQDMGF
                     HWQMSKSFAILGRALGGLAHVGEEIRRPIARGISNLIRDSLQYEPEK"
BASE COUNT          298 a          447 c          455 g          340 t
ORIGIN      
        1 cttttcagat acggccgcaa tgccaacaga ccggtcaatt gaaacgggat gttcaactcg
       61 ctcatatcga ttaacgtgtt catgccggct ttccgcgcgg tgagggtaaa gggcggcgtg
      121 ataatcgtcg cttggacgtt cttcgacagc atcgcggcat aacgcgcggt ttgcacgccg
      181 atctgtaaca gcgtgacatc cttttcggcg ttcaatccga ctctcgccag cgccaacttg
      241 acgctcaagt cggtggcgct gccgaagcgg ctgacggcga tcgtgccgcc ccggagctga
      301 tcgactttct tgatctccgg cagggatatc aagctgtagg ggaaagtgtt cagcaagctg
      361 gcgatgatca ccacatcgac gccggagatc ttgctcgcca ccgatgccga gccgtcggac
      421 aacgccatgg cgacgtcgcc gccgagcatc gcctggattc ccagcgagcc gccggtgacg
      481 aaaaccagcg ccggatcaag gttgtatttt ttgaatagtc cgacttcctt ggcgacgatc
      541 aacaccgcct gataagggct ggtcgccgta taggggatgt tgatcttgcg cagttgggcc
      601 tgggcggttg ccgctaacgc gagactgaca atcaatacga tcatgcccaa ggtcttgcga
      661 cgggacccat ttatcctggt tctttccatc actccatcac tccaatactc cagacccccg
      721 tatgtaacgt cgaagtgtat ttacttctcc ggctcatact gcaaactgtc ccggatcaga
      781 ttcgaaatgc cgcgggcgat ggggcggcgg atttcctcgc cgacatgggc gagaccgccc
      841 aaggcacggc cgaggatggc aaaacttttc gacatttgcc agtggaaacc catgtcctgg
      901 gagatcgcgg cgatggcgcc ggtgacgttg accggcaggt gtttgccgac tttttggtcg
      961 gcgatcttgc cgattttttt caacagctcg cagttgcggc cgtagacctt ggtttcctgg
     1021 gcgatctcga acagccggtc ggcgcgcggg tcgccgccgg tgtgaatgcc atggccgatg
     1081 ccggggatca gttgattgtt cgccaagcgg cgctcgacgg tcttcaaagc gacggcgtcg
     1141 agatcggcat ccttggcttc tttggcgagc gcatcgctga gcattttggc gcaatactcc
     1201 gacgagccca gatgcacgct gccggcgccg agaatcgccg cggccaccgc gccttgaatc
     1261 gcttcgggcg cagagtgaaa ggtcatgcgt gccgcggcgg cgccggtggt catgccatgg
     1321 tcgaccagca cgatcaacat cgagtcgatc atcttgcctt catcggcggt cggcaaccgc
     1381 ccctggagca tcagacagac catttgcgag aaactgatct tgccgagcag atctttattc
     1441 aggtcgtagt tgcgcacgta gatcttgtcg agctctgcgc ggcccagtgc ggaaacaagt
     1501 ttcggaacgt cagccataaa tcctccggtt tttggttttg
//
LOCUS       DATIRS010000638         1668 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_637948, whole genome shotgun sequence.
ACCESSION   DATIRS010000638 DATIRS010000000
VERSION     DATIRS010000638.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1668
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_637948"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..332)
                     /locus_tag="VLM90_08050"
     CDS             complement(<1..332)
                     /locus_tag="VLM90_08050"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12955.1"
                     /translation="MATSAGAQQKVRLNWGAISGVMSGIWVAQEEGLFKKHGLDLELI
                     HIASTSRAIQSMLSGEIHYTTADALNSIQAVGAGADVVMFCAGVNRFVFSIMARPDIK
                     RVADLKGK"
     gene            complement(463..1533)
                     /locus_tag="VLM90_08055"
     CDS             complement(463..1533)
                     /locus_tag="VLM90_08055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12956.1"
                     /translation="MAESLRYYIAHNGGLKVMENRAGSLNTIAEHFPSVTLEHMIGGI
                     KKPEIVFAAVAFDGGYRSEDAGKSWTKIMDGDVRTFTVDPHDERVVYMGIGPIRLFRS
                     EDGGKKFEPLDGMLDFGPEVKSKWGVPPRLKDVETPHVRHIFIHPDDRNLIYVLLEHG
                     GVLLSRDRGETWYDRSVGIDYVDMHYIENFPGSKERFYVSSARGFFRTDNCGEHWRRV
                     ETGMPWAYTELHSYSHEWHFMPGGRMVLSGGKGSPGVWARERTTPLGHILLSDDGGES
                     WRISANGLEKENPWMPWVLLQHPTDKNALFCGMGDGARGYGFDARITGKGGLYASRDR
                     GDSWEPVLKDTPSVLTAWVAPA"
BASE COUNT          349 a          533 c          456 g          330 t
ORIGIN      
        1 ttcttgcctt tcaaatccgc cacccgcttg atatccggcc gcgccatgat cgaaaagaca
       61 aagcgattga ccccagcaca gaacatcacg acatcggcgc cggcgccgac ggcttgaata
      121 ctattcagcg catccgctgt cgtgtagtga atctcgccgg acaacatcga ctgaatcgcc
      181 cgcgaagtcg acgcgatatg aatcagctcg agatcgaggc catgtttctt gaacagcccc
      241 tcctcctgcg ccacccagat accactcatg accccgctga tggcgcccca gttgagccgg
      301 actttttgct gggcgccggc ggaggttgcc atcgcgagaa ggaaaagagc gaatatccag
      361 atttgaatta tcattgcggt aagagaatgg gcgacccgcc ggtcgcccct acaagtaaga
      421 aaatttccga aaccttgaac ttttgaacct tgaacccgcc ggctatgccg gcgccaccca
      481 ggcggtcagc accgacggcg tgtccttcag caccggctcc cacgagtcgc cgcggtcgcg
      541 gctcgcgtac aagccgcctt tgccggtgat gcgcgcgtcg aagccgtagc cccgggcgcc
      601 gtcgcccatg ccgcaaaaca gcgcgttctt gtcggtcgga tgttgcagca gcacccaggg
      661 catccatgga ttctcttttt ccaacccgtt ggccgaaatg cgccagctct caccgccgtc
      721 gtcgctcaaa agaatatggc ccagcggcgt ggtccgctcg cgcgcccaga caccgggcga
      781 gcccttgccg ccgcttagca ccatccgtcc gccgggcatg aagtgccact cgtgggaata
      841 gctatgcagt tcggtgtaag cccagggcat gccggtctcg acccggcgcc agtgctcgcc
      901 gcagttgtct gtgcggaaga aaccgcgcgc cgacgagacg taaaagcgct ctttgctgcc
      961 ggggaagttt tcgatgtagt gcatgtcgac ataatcgatg ccgacgctgc ggtcgtacca
     1021 agtttcgccg cggtcgcggc tcagcaagac accaccatgt tcgagtaaaa cataaatcag
     1081 gtttcgatcg tcgggatgaa taaagatatg gcgcacatga ggcgtctcga cgtcttttag
     1141 ccgcggcggc acgccccact tactttttac ctcgggaccg aagtcgagca tgccgtcgag
     1201 aggttcgaat tttttcccgc cgtcctcgct acgaaacagc cggatcggcc cgatgcccat
     1261 gtaaaccacg cgctcgtcat ggggatccac cgtgaaggtc cgcacgtcgc cgtccatgat
     1321 cttggtccag ctcttgcccg cgtcttcgga tcgatagccg ccatcgaaag ccaccgcggc
     1381 aaagacaatc tcgggcttct ttatgccgcc aatcatatgt tccaaagtca cgctgggaaa
     1441 atgctccgcg atggtattca gggaaccggc acggttctcc atcaccttga gcccgccatt
     1501 atgggcgatg tagtaacgca acgattcagc cataagacct cctctgatca tcaattcgta
     1561 gagcgctgaa attactactg catcggcaca gacttgtagg ggcgaccctg tggtcgccct
     1621 tccggagggc aggcacaggg gcctgcccct acacaagacc gcgtcgcg
//
LOCUS       DATIRS010000639         2123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1228158, whole genome shotgun sequence.
ACCESSION   DATIRS010000639 DATIRS010000000
VERSION     DATIRS010000639.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2123
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1228158"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(55..1023)
                     /locus_tag="VLM90_08060"
     CDS             complement(55..1023)
                     /locus_tag="VLM90_08060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12957.1"
                     /translation="MSGTNGKKALHVATFSGWYRFEQNGKQFTQTKRDLSYWTLTCMT
                     VDPEDPKIIYAGTEHSGLFYTKDAGAHWNRADPQVPKMFLYSALAIDGGVMVGTIPSA
                     VYRSKNGGWEELEGVRLHSAGANFPPSPELQSRTRYLACEPENKNRLYAGIEVGGLVL
                     SDDGGRGWEPCNEGLTDMDIHEILASEQHSGMVFLACGEACFRSPDRAGHWENISPKN
                     HDYGISVAEDNQGVLYVGAARGRPNRWLREEGAMSAILRSSDKGKSWDTVIDNLNGGV
                     MHLCPTPDGNGMVAGTSDGTLLVVDDSGAREVVKGLPFVTSVELAA"
     gene            complement(1113..1523)
                     /locus_tag="VLM90_08065"
     CDS             complement(1113..1523)
                     /locus_tag="VLM90_08065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12958.1"
                     /translation="MSSAREIEAIVETFRAGDEESAFFTLIELPGDILPALIETFRDE
                     QSSGIRAFLVKAAWERHEEAVLPFLSEVLHGAEEEAWQQALDGLVAFATPQSLEILQS
                     ARSRPFAEESANRRFQLWLDEAIGQVMYELRAKK"
     gene            complement(1524..>2123)
                     /locus_tag="VLM90_08070"
     CDS             complement(1524..>2123)
                     /locus_tag="VLM90_08070"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family cysteine hydrolase"
                     /protein_id="HSQ12959.1"
                     /translation="ELKEIVDPKRTVLLVWDMQNDQAGGAFNKEALVRTAPPLIATAA
                     KAGVKTVYTRQTPFLWSEEAVTWIRRAMINEKVDHPSKLKPRRAKNSTNWEIMKPFKP
                     APEDIVIDKRRPSMFVGNEFETIMHNRGASTVVMIGCTTDGGVEMTVRDGHNRGFSMV
                     IIRDCVGTYTEEGHNAALKRIERFADVVESKELIEIWKS"
BASE COUNT          373 a          621 c          627 g          502 t
ORIGIN      
        1 gtggcaattg ctccgaactt catcccttat ccttccgcct ttatccttgg tttcttaggc
       61 tgccaattct accgaggtga caaacggcag gcccttgacg acttcgcgcg cgccgctatc
      121 gtcgacgaca agcaaagttc cgtccgaggt tccagcgacc atgccgttgc cgtcgggcgt
      181 ggggcagagg tgcatgacgc cgccgttcaa attgtcgatg acggtatccc agctcttgcc
      241 cttgtcgctg ctgcgcagga tcgccgacat ggcgccttct tcgcgtaacc agcgattggg
      301 ccggccacgg gcggcgccga cgtagaggac gccttggtta tcttcggcga cggaaatgcc
      361 gtagtcatga tttttcggcg agatgttttc ccagtggccg gcgcggtcgg ggctgcggaa
      421 gcaggcttcg ccgcaggcga gaaaaaccat gccgctgtgt tgctctgagg cgaggatctc
      481 gtggatgtcc atgtcggtga gcccttcgtt gcagggctcc cagccgcggc cgccgtcgtc
      541 gctcaacacc aggccgccga cttcgatgcc ggcgtagagg cgattcttgt tttccggctc
      601 gcaggcgagg tagcgcgtgc gcgactgcaa ttccggactc ggcgggaagt tggcgccggc
      661 gctgtgcaac cgcacgccct ctagttcctc ccagccgccg ttcttgctgc ggtacaccgc
      721 tgatgggatc gtgccgacca tgacgccgcc gtcgatggcc agcgccgagt agagaaacat
      781 cttcggcacc tgcggatcgg cgcggttcca gtgggcgccg gcatctttgg tgtaaaagag
      841 tccggagtgt tcggtgccgg cgtagatgat cttgggatct tccgggtcca cggtcatgca
      901 ggtaagcgtc cagtaactca agtcgcgctt ggtctgggtg aactgcttac cgttctgttc
      961 gaaacggtac cagccggaaa atgttgcgac atgcaaggcc ttcttgccat tcgtcccgct
     1021 catgagagtc tccttacggc gatgtgccga gtgaaatttg ccttagtatt aactcgacat
     1081 ggggttcaat cgcaaatggg aaaactcgtg aatcactttt tggcacgcag ctcatacatg
     1141 acttgtccga tcgcctcgtc cagccacaat tgaaatcttc tatttgctga ctcttcggca
     1201 aacggtcgtg agcgggcaga ttgtagaatc tccagggatt gcggtgttgc aaacgctacc
     1261 aggccgtcca gcgcttgttg ccacgcttct tcttccgcgc cgtggagtac ttcgctgaga
     1321 aaaggcagga ccgcctcttc atggcgttcc caggctgctt tgaccaggaa ggcgcgaatg
     1381 ccggaacttt gttcatctct gaaagtctcg atcaatgccg gcagaatgtc gccaggcaac
     1441 tcaatcagag tgaaaaacgc cgactcttcg tctcccgccc gaaatgtctc gacgatagct
     1501 tcgatttcgc gcgccgacga catctaactt ttccagatct ctataagttc tttcgactcc
     1561 acaacatcgg cgaagcgctc gattcttttc agcgcggcgt tgtggccttc ctcggtgtag
     1621 gtgccgacgc aatcgcgtat gatgaccatt gaaaaaccgc gattgtggcc gtcgcgcacg
     1681 gtcatctcga cgccgccgtc ggtggtgcag ccgatcatga cgacggtgct ggcgccgcgg
     1741 ttgtgcatga tggtttcaaa ctcgttgccg acgaacatgc tcggccggcg cttgtcgatg
     1801 acgatgtctt cgggcgccgg tttgaagggt ttcatgatct cccagttggt gctgttcttc
     1861 gcacggcgcg gcttgagctt gctcggatga tcgaccttct cgttgatcat cgctcggcga
     1921 atccaggtga ccgcctcttc gctccagaga aacggcgtct ggcgcgtgta aacggtcttg
     1981 acgccggcct tggctgcggt ggcgatgagc ggcggcgcag tgcgaactag cgcctctttg
     2041 ttgaatgcac cccccgcctg atcgttctgc atgtcccaga ctagcaggac cgtgcgtttg
     2101 ggatcgacga tctcttttag ttc
//
LOCUS       DATIRS010000640         1839 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_47389, whole genome shotgun sequence.
ACCESSION   DATIRS010000640 DATIRS010000000
VERSION     DATIRS010000640.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1839
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47389"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(43..1074)
                     /locus_tag="VLM90_08075"
     CDS             complement(43..1074)
                     /locus_tag="VLM90_08075"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ12960.1"
                     /translation="MTVLLLAILVLFGSSTLSAQTRTTADIANYRGADREEMLKAGAK
                     KEGKLIWYTSLTAHRDIANVFESKYPGVKVETYRAGPNDLSRRLLSEAQSKRSIADLV
                     ETTPTTMMIMRDNKLLMPYTSPHLANYPEDSKEEADKTRVFWTTDRESIVGLGYNRNM
                     MRAAEVPKTFADMAKPENKGKIGVSGDTTGVRFIGAMIAAKGEEYVKQLRNLEIRPHM
                     ISGGAMHELMAAGEMHMSISIFRNHVLAGKLKGAPTEWVPLDLSQANAGSVGLPAATN
                     SPHAALLFIDFLISPEGQKIFEDKFRFASSTKNYGFKRWYPEKGKTLEQYEKAEERWK
                     KLLHDLVRR"
     gene            complement(1132..>1839)
                     /locus_tag="VLM90_08080"
     CDS             complement(1132..>1839)
                     /locus_tag="VLM90_08080"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HSQ12961.1"
                     /translation="QLVYPDYVSGVLCAIIIISGVLYRDRQKKGAFIDLAQSEATAFM
                     IGANLMEAASSGKNPEPIGNMSLSVAPHGCYPCKGEDRWCVIAAETEAQWSDLANILG
                     GDVAGNSRFATNAARLREREALDKIISGWTQTRDAFAVRDQLQMAGIPCGVAQTGEDL
                     VNDPQLKERGFIVEVDNPRLGKVVLPSFPLHFTNAKLTRRWEFPVLGKDTEAVLRDVV
                     GYDAATIAAHKQDGVLE"
BASE COUNT          367 a          548 c          496 g          428 t
ORIGIN      
        1 ctgacttctg acttctgact tctaacttct gacttccgac ttctaccgcc gcaccagatc
       61 gtgcagcagt ttcttccaac gctcttcagc tttctcatac tgctcgaggg ttttgccttt
      121 ttcgggatac cagcgcttaa agccgtagtt cttggtcgag ctcgcgaagc ggaacttgtc
      181 ctcaaaaatc ttctgaccct cggggctgat cagaaaatcg atgaacaaga gcgccgcatg
      241 gggactattg gtcgccgctg gaagcccaac gctgccggcg ttggcctgac tcaaatcaag
      301 gggcacccat tcggtaggcg cgcctttgag cttgccggct agaacgtgat tgcggaagat
      361 cgaaatcgac atatgcattt cgcctgcggc catcaactca tgcatggcgc cgccggagat
      421 catatgcggt ctgatctcca agttacgtag ctgcttgacg tactcttcgc ccttggcggc
      481 gatcatcgcg ccgataaagc gcacgccagt ggtgtcgccg ctgacaccga tcttgccttt
      541 gttttccggc ttagccatgt ctgcgaaagt tttcggcact tcggcggcgc gcatcatgtt
      601 gcggttgtag cccaagccga caatggattc tcgatcggtg gtccaaaaca cccgggtctt
      661 atccgcttct tctttagagt cttcaggata attggcgaga tgcggcgatg tgtatggcat
      721 cagcaactta ttgtcgcgca tgatcatcat cgtcgtcggc gtggtttcaa ccaggtcggc
      781 gatgctgcgt ttggattgcg cttcggagag cagccgccgg ctgagatcgt taggcccggc
      841 gcggtaggtt tctaccttga cccccggata cttcgactcg aacacattgg cgatgtcgcg
      901 atgggcggtc aggctcgtat accagatcag tttcccttcc tttttcgcgc cggctttgag
      961 catctcctcg cggtcggcgc cgcgataatt agcgatgtcc gcggtggttc gggtctgagc
     1021 agaaagcgtc gacgatccaa acaaaaccag aatggctagc agcaatacgg tcataatcga
     1081 ctttctcctg aatgcatgat caacccagta ctccaatact ccatcactcc actattccaa
     1141 caccccatcc tgcttatgcg cagcgatggt cgcagcatca tagccgacga catcgcgcag
     1201 caccgcctcg gtatccttgc cgagcacggg aaattcccaa cggcgcgtca gcttggcgtt
     1261 ggtgaagtgc aacggaaaac tcggcaatac gaccttgccc aatctaggat tatccacttc
     1321 gacgatgaag ccgcgctcct tgagctgcgg gtcgttgacc aaatcctcgc cggtttgcgc
     1381 cacgccgcag ggaattcccg ccatctgcag ctgatcgcgg accgcgaagg cgtctcgcgt
     1441 ctgcgtccaa cctgaaataa ttttatcgag cgcctcccgt tctcggagcc gcgccgcgtt
     1501 ggtggcaaag cgtgaattgc cggcgacgtc accgccaaga atgttggcga ggtccgacca
     1561 ttgtgcctcg gtttccgcgg cgatcacgca ccagcgatct tcgcccttgc acggatagca
     1621 gccatggggc gccaccgaga gcgacatgtt gccgatcggt tcgggattct tgccgctcga
     1681 cgcagcttcc atgagattgg cgccgatcat aaatgcggtc gcctctgact gcgccaaatc
     1741 gatgaacgcg cccttctttt gccggtcccg gtaaagcacg ccggagatga tgatgatcgc
     1801 gcacaggacg ccggaaacat aatctggata taccagctg
//
LOCUS       DATIRS010000641         7107 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1621317, whole genome shotgun sequence.
ACCESSION   DATIRS010000641 DATIRS010000000
VERSION     DATIRS010000641.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 7107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7107
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1621317"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1112)
                     /locus_tag="VLM90_08085"
     CDS             complement(<1..1112)
                     /locus_tag="VLM90_08085"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HSQ12962.1"
                     /translation="MTTEAQDSLVAAMLQPEFYPKPPASVSHKETHISHIFFADELVY
                     KVKKAVRYSFLDYSTVEKRRYFLQEELRLNRRLAPSVYIGVLPITFDDLGWRLGGWAE
                     PTEYTLVMRRLPDKRMLPFLLDTGQVTAAMMRELAELLARFHTDAERVTGIEPDRYPA
                     LVQAQWNDNLADLAQASSQVIDPENCHAIEKFGAEFFLRHSETLKRRAANGWLRDVHG
                     DLHTEHVCFAPEGIQIFDCIEFEPKFRQCDLASEIAFLMMDIEVRGGDSLIAPFLQRY
                     RESIDDAEADELLPFWRCYRALVRAKVYALRGACGFDSARRYARYAARLAWTPAQPFI
                     VIVSGLTGSGKSTLARELSARTGVPTINSYVVRKELA"
     gene            complement(1452..2396)
                     /locus_tag="VLM90_08090"
     CDS             complement(1452..2396)
                     /locus_tag="VLM90_08090"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HSQ12963.1"
                     /translation="MEFHLDNIIGKSKALRDVLGLVKKVANTQATVLITGASGTGKEL
                     IALALHALSERKDKLFLPVNCGALPETLLESLLFGHMKGSFTGAFANQEGLLEKARGG
                     TIFLDEIGEIPQHLQVKLLRALEAKEILPIGTTTPRQIDVRILAATNRDLTQEVAAGR
                     FREDLFYRLNVMEIHIPPLKDRPEDIPLLIDYFIKRHNPELKRNFDGIDADAVQLLMA
                     LPWKGNVRELDNVIEHTMILAEGERIALTDLPAAVVASSAGQAAFTFNLKDSINQFEK
                     KHIARVLEHTNQDRKEAAKLLDISLSSLYRKIEDLGIP"
     gene            complement(2565..3068)
                     /locus_tag="VLM90_08095"
     CDS             complement(2565..3068)
                     /locus_tag="VLM90_08095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12964.1"
                     /translation="MTTEEPFDPMRSFAAIERLVSKIYFRFSHLFLAQPELRDFWWEM
                     AREEEQHGCILQACREIIENFAEPTLDPMINRDKVQQLSLRLNAFLAQGTASLTVEDA
                     FRIAVDIESSEIDAIYSKLTHLGGEQIAKTMENLGVPASVQRQKLKAALRRFCSSPEL
                     LSAAERL"
     gene            complement(3065..3571)
                     /locus_tag="VLM90_08100"
     CDS             complement(3065..3571)
                     /locus_tag="VLM90_08100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12965.1"
                     /translation="MDELGDMSTMFDLMRTPEGISPIERLLNEFEAHEAKEEQSIAIY
                     KKSLGETANPMTRFLLQMIVSDEEKHRAVVHSMVATLKGSLTWTKPAGSLEGGDDVAG
                     VNRGLRAATEEFIRIEKEGIKEYKILLEESSGYYHGLFKVLLGSMIRDSEKHVELLEF
                     LKENLASA"
     gene            3916..5235
                     /gene="pfp"
                     /locus_tag="VLM90_08105"
     CDS             3916..5235
                     /gene="pfp"
                     /locus_tag="VLM90_08105"
                     /inference="COORDINATES: protein motif:HMM:NF041103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diphosphate--fructose-6-phosphate
                     1-phosphotransferase"
                     /protein_id="HSQ12966.1"
                     /translation="MANHQPSLKDNLGILVGGGPAPGINGVIGAITLEARTRARKVIG
                     IYDGFQWLMQGDANHARELDHDDVSRVHFQGGSILNTSRANPTKKPEDLKRVVASLDK
                     LGIGYLATIGGDDTMYAASEVAKAAEGRIRVCHVPKTIDNDLPLPGETPTFGFETARQ
                     LGSELVQNLMEDSRTTGRWYFVVVMGRSAGHLALGIGKSTGATLTLIPEEFAGPIRMV
                     TVCDLLEGAMLKRQALWNRSDGVAVIAEGLLEHMAAEELQGIEGVRIAHDSYGHLRLA
                     EVDLAYVLKTLVEHRFASRRTSAAVVHKNIVYELRSAAPIAFDCEYVRTLGYGAVEFL
                     LNPSAAAAKLSGALVCLVNGQLDYLDFTKLQDPKTGKTRVRSVDVNTPSYRIAREYMI
                     RLEKEDFRDDEKLRQLAQAASSPEHYCAPEQFRDRYQYLTTDLRGCN"
     gene            5247..6272
                     /gene="gap"
                     /locus_tag="VLM90_08110"
     CDS             5247..6272
                     /gene="gap"
                     /locus_tag="VLM90_08110"
                     /inference="COORDINATES: protein motif:HMM:TIGR01534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0019682 - glyceraldehyde-3-phosphate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HSQ12967.1"
                     /translation="MARSNPTKVAINGFGRIGRLVLRTLLERCKTELAVVAINDMADL
                     KTNAHLFRYDSTYGIYPGTVECADGAMNVDGKSIAVLNQKDPARLPWKQLGVEIVIEA
                     TGVFTDGAQVRGHLDAGAKKAIVTAPATNEDITLVLGVNDGDYNPRKHHILSTASCTT
                     NCLAPVAKVLHDSFGIERGLMTTIHAYTNDQRILDLMHKDLRRARAAAVNIVPTSTGA
                     AKAIGLVMPELKGKLHGISLRVPTATVSVVDLVVDLKKAASIEAINAALQQGAAGKMN
                     GILAYCDEPLVSSDFRGNSASSIVDGLSTVVLEGKMAKVLCWYDNEWGYSCRVADLAK
                     LLVAKGL"
     gene            6286..6675
                     /locus_tag="VLM90_08115"
     CDS             6286..6675
                     /locus_tag="VLM90_08115"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSQ12968.1"
                     /translation="MIAKDIMTRDIITVAPTMSVKNLAMTLIKNQISGAPVAAKNGKI
                     LGVVSEADIIAKRGKDVKAIMSKTIISVSEDTSIEEIARLMSAHVIKRLPVMKDGAIV
                     GIVSRADIVSAIAQGEHVAIHTPIYDL"
BASE COUNT         1555 a         2131 c         1929 g         1492 t
ORIGIN      
        1 gccagctctt ttcgcacaac gtacgaattg atcgtcggca ctcccgtgcg cgcgctcagc
       61 tctcgcgcca gggtcgactt gccactgccg gtcagaccgc tgacgatgac gatgaacggc
      121 tgcgccggcg tccaggcaag acgtgccgcg tagcgcgcat agcggcgcgc gctatcgaat
      181 ccgcatgcac cccgcaaagc gtagaccttg gcacgcacca gggcgcgata acatcgccaa
      241 aacggcaaca attcgtccgc ctcggcatcg tcgatcgatt cgcggtagcg ttggagaaac
      301 ggcgcaatca ggctgtcgcc gccgcgcact tctatatcca tcattaaaaa agcgatttca
      361 gaggcgagat cgcattggcg aaatttcggc tcaaactcga tgcaatcgaa gatctgaatc
      421 ccttccgggg cgaaacaaac atgttcggta tgcagatcgc cgtggacatc gcgcagccat
      481 ccatttgccg cgcgccgttt gagagtctcg gagtggcgca ggaaaaactc cgcgccaaac
      541 ttttcgatgg catggcaatt ctccggatcg atgacttggc ttgaggcctg cgccaaatcg
      601 gcaaggttgt cgttccattg tgcttgcacc agcgctggat agcgatccgg ctcgatgccg
      661 gtgacgcgct ccgcgtcggt gtggaagcgt gccaatagtt ccgccaactc gcgcatcatc
      721 gccgccgtca cctggccggt gtccagaaga aacggcagca tgcgtttgtc cggcaaccgg
      781 cgcattacca gcgtatactc cgtcggctcg gcccacccac ccagccgcca acccagatcg
      841 tcgaaggtga tcggcagcac gccgatgtac accgacggcg ccaagcgccg gttgaggcgc
      901 agctcttcct gaagaaaata acggcgcttc tcgacggtcg agtaatcgag aaacgagtaa
      961 cgtaccgcct tcttcacctt gtagaccagc tcatcggcaa agaagatgtg cgagatatgg
     1021 gtttctttgt ggctcacgct ggccggcggt ttgggataga actccggctg cagcatcgcc
     1081 gccaccagcg aatcttgggc ttctgtagtc atcgatttag cgcttgcaac taatccccgt
     1141 ggccatcggc ctccctcgcc aatccattcc gcaataaccg ttccgcaata agagtgccac
     1201 ggaacccccg gcttaaagac agcccgggtg gtaatctcat cctgggccga aggcggagaa
     1261 tctcgtcccc gtaagacctt gaaaatgcgc gaagtcttct tttgctcggt atgacatcca
     1321 taggtttgcg ggcgtcgggc aaagtcgcgg cagcacggga attcttgcaa agcggaaata
     1381 ccactccggc gatttgcaga agatggaatt ctgttagagt gcgaacttac cagtctaggg
     1441 gcggacttga actaagggat gccgagatct tcgatcttgc ggtagagaga agagaggctg
     1501 atgtccagga gtttagccgc ttccttgcga tcctggttag tgtgctcgag cacgcgggcg
     1561 atatgctttt tttcgaactg attgattgaa tccttcaagt tgaaggtaaa cgccgcctgg
     1621 ccggcgctac tggcgaccac cgcggcgggc aaatccgtga gcgcaatgcg ctcgccttcg
     1681 gcaagaatca tcgtatgctc gatgacgttg tcaagctcgc gcacattgcc tttccacggc
     1741 agcgccatca ggagttgcac ggcatcggcg tcgataccgt caaaattgcg tttgagctcc
     1801 gggttgtggc gcttgataaa atagtcgatc aacagcggaa tatcctcggg acgatccttt
     1861 aaaggcggga tgtggatctc catgacattc aaccggtaaa aaagatcctc gcggaaacgg
     1921 cccgccgcca cctcttgggt caagtcgcga ttggttgccg ccaagatacg cacatcgatt
     1981 tgccgcggtg tcgtcgtgcc gatggggaga atttctttgg cttcgagggc gcgcagcagt
     2041 ttgacttgca gatgctgcgg gatctcgccg atctcgtcga gaaaaatcgt cccgcccctg
     2101 gctttctcca acaatccttc ttgattggcg aaggcgccgg taaacgagcc cttcatatgg
     2161 ccgaatagca aactttccag cagcgtctcc ggcagcgcgc cgcagttcac cggcaaaaac
     2221 agtttgtcct tgcgctcgct cagcgcgtgc agcgccaagg cgatcagttc cttgccggtg
     2281 ccgctggcgc cggtaattaa aaccgtcgcc tgagtgttgg cgactttctt gaccaagccg
     2341 agcacatcgc gcagcgcttt gctcttgccg atgatgttgt cgaggtgaaa ttccatggct
     2401 agatctacat taagccccgt ctcttgaggc gggaacaact aaaagtttcc aaagggggcg
     2461 agcatccccc ttgcaatatt taaattggca gcggggttaa ttctccctgc gcgacgtagc
     2521 ttggttaatg gaaacggcca aatcgcccgc gggttggcta tgcgtcagag cctttccgcc
     2581 gcggataaca gctcggggct ggaacaaaat cgccgcagcg cggccttgag tttttgtctt
     2641 tgaacgctcg ccgggacgcc gagattttcc atcgtcttgg cgatctgttc cccgcccaaa
     2701 tgagtcagct tgctatagat tgcgtcgatc tctgagcttt cgatatcgac agcgatgcgg
     2761 aaggcgtctt ccaccgtcaa cgaagccgtg ccttgggcga gaaaagcatt cagccgtaga
     2821 ctcagctgtt ggaccttgtc gcgattgatc atcgggtcca aggtcggttc ggcaaaattt
     2881 tcgatgatct cgcggcacgc ctgtaagatg cagccatgct gctcttcttc cctggccatc
     2941 tcccaccaga aatcgcgcag ttccggctgg gccagaaaca gatgcgagaa gcggaagtaa
     3001 atcttagaaa ccagccgttc gatcgccgcg aaacttctca tgggatcgaa cggttcctcg
     3061 gtagtcatgc gcttgctaaa ttctccttga ggaattccag cagctccaca tgcttttccg
     3121 aatctcgaat catcgagccc aacaggacct tgaacagccc gtgatagtag ccgctgctct
     3181 cttcaagcag gattttgtat tccttaatcc cttctttttc aatccggata aactcttcgg
     3241 tcgccgcgcg caatccgcgg ttcacgcccg cgacatcgtc gccgccttcg aggctgccgg
     3301 ctggctttgt ccaggtcagg ctccctttta gcgtcgccac catggagtgg accaccgctc
     3361 ggtgcttctc ttcgtccgaa acgatcatct gcaacaaaaa gcgggtcatc gggttggccg
     3421 tttcaccgag acttttcttg tagattgcga tcgactgctc ttccttcgcc tcatgggctt
     3481 cgaactcatt gagcaaccgt tcaatgggcg agatcccttc cggtgtcctc atcaagtcga
     3541 acatcgtgct catgtctcct agctcatcca tgaccttctc ccttctctat caaatggctg
     3601 gcgaggatgt tgccccgtca ggcttgctta acgcgccgct cccctaacct tctctgcaaa
     3661 taacctatcc ctcattttgc ctttgtactt ttgccttctc ccctattatc cacacgctag
     3721 cgcaatgagt gtgccaggga aatttaaccg gaacttcggc gcctttatca tagatggcgg
     3781 cggaactctt cgcagggaca ggaatcgaaa cctggcaatt tcgcagttgt gcgaaagcca
     3841 ttgatcgatt agttcatttc acgtctggca ttgcggaaat tatccggcac aataatcgca
     3901 aagcattacg tcatcatggc aaaccaccaa ccttctctaa aagataacct cggcattctt
     3961 gtcggcggcg gccctgctcc tggcatcaac ggcgtaatcg gcgcgatcac gctcgaagcc
     4021 cgcactcgcg cccgcaaagt catcggcatc tacgatggtt ttcaatggtt gatgcagggc
     4081 gacgccaacc atgcaagaga gctcgaccac gacgacgtgt cgcgcgtcca tttccaaggc
     4141 ggctcgatct tgaatacctc gcgcgccaat ccgaccaaga agccggagga tctcaagcgc
     4201 gttgtcgcat ccctcgacaa actcggcatc ggctatctcg ccaccatcgg cggcgacgac
     4261 accatgtacg ccgccagcga agtggccaag gccgccgagg ggcgcatccg cgtctgccat
     4321 gtgccaaaga caatagacaa tgatttgccg ctgccgggcg agacaccgac tttcggcttt
     4381 gagaccgcgc gccaattggg cagcgaactg gtgcagaatt tgatggaaga ctcgcgcacc
     4441 accggccgct ggtactttgt cgtggtcatg ggccgttccg ccggtcatct cgccctcggc
     4501 atcggtaagt ccaccggcgc aaccctgacc ctcattcccg aggaatttgc cggcccgatc
     4561 cgtatggtga ccgtgtgcga ccttttggaa ggggccatgc tcaaacgcca agcgttatgg
     4621 aatcgctccg acggtgtcgc cgtgatcgcg gaaggactgc tggagcatat ggccgcggaa
     4681 gaactgcaag gcatcgaagg cgtacgcatc gcccacgaca gctacggcca cctacggctt
     4741 gccgaagtcg atcttgccta tgttttaaag accctggtcg agcatcgttt cgccagccgc
     4801 cgcacgtcgg ccgccgtggt gcataaaaac atcgtctacg agctgcgctc ggcggcgccc
     4861 atcgccttcg attgcgagta tgtgcgcacc ctaggctatg gcgccgtgga gttcttgctc
     4921 aacccaagtg cagcggcggc caagcttagc ggcgctctgg tttgcctggt caacggccag
     4981 ctcgattacc tcgatttcac caaattgcaa gatcccaaga ccggcaagac gcgcgttcgc
     5041 tcggtagacg tcaacacgcc gtcgtaccgg atcgcccgcg agtacatgat tcgcctggag
     5101 aaagaagact ttagagacga cgaaaagctc cggcagctgg cccaggccgc gtcctcgcct
     5161 gagcattatt gcgcgccgga acagtttcgc gaccgctatc aatatctgac caccgattta
     5221 cgtggatgca actaacggga gaaggcatgg caaggagcaa cccaacaaaa gtcgcgatca
     5281 atggcttcgg ccgaattggc cgtttggtgc tacgcacgct acttgagcgc tgcaagacag
     5341 aactcgcggt ggtcgccatc aacgacatgg cggacttaaa aaccaatgcc cacctgttcc
     5401 ggtacgactc gacctacggc atttaccccg gcacggtcga atgcgccgac ggcgcgatga
     5461 acgtcgacgg caagtccatc gccgtcctca accaaaaaga tcccgcccgc ctgccctgga
     5521 aacagcttgg cgtcgagatc gtcatcgaag ccaccggggt atttaccgac ggcgcccaag
     5581 tgcgcggcca tctggacgcc ggcgctaaga aggcgatcgt caccgccccg gcgaccaatg
     5641 aagacatcac cctggtgctg ggcgtcaacg atggcgatta caatccgcgc aagcatcata
     5701 tattgtcgac cgcctcgtgc acgaccaatt gcctggcgcc ggtggccaaa gtgctgcacg
     5761 acagcttcgg catcgagcgc ggcctgatga ccacaatcca cgcctacacc aacgaccaga
     5821 gaattctcga cctgatgcac aaagacctgc gccgcgcccg cgccgcggcg gtgaacatcg
     5881 ttcccaccag caccggcgcc gctaaagcga tcggcttggt catgccggag ttgaaaggca
     5941 aactgcacgg catttccttg cgcgtaccga ccgcgacggt gtccgtcgtc gacttggtcg
     6001 tcgatttaaa gaaagccgcg tcgatcgaag cgatcaacgc ggcgctgcag caaggcgccg
     6061 cgggcaagat gaacggcatc ctcgcctatt gcgacgagcc gctggtatcg agcgactttc
     6121 gcggcaactc agcgtcatcg atcgtcgatg gactttccac cgtggtgctt gaaggcaaga
     6181 tggccaaagt tctatgttgg tacgataacg aatggggcta cagctgccgg gtcgccgact
     6241 tggccaaact gctggtggcc aagggacttt aacaaggagc aaaccatgat cgccaaagat
     6301 atcatgaccc gtgacatcat caccgtcgct cccactatga gcgtgaagaa cctagccatg
     6361 acgctgatca agaatcagat cagcggcgcg ccggtggcgg ccaagaacgg caagatcctc
     6421 ggcgtggtct cggaagccga catcatcgcc aagagaggca aagacgtcaa agcgatcatg
     6481 agcaagacca tcatcagcgt gagtgaagat acctcgatcg aagaaattgc ccgcttgatg
     6541 agcgcccacg tgatcaaacg cctgccggta atgaaggacg gcgccattgt cggcatcgtc
     6601 agccgcgccg acatcgtcag cgccatcgcc cagggcgagc atgtcgcgat ccacacgccg
     6661 atctacgatt tgtaaattca ccggttacga aacctcgtcc gttttcagct tgcgtccggc
     6721 aacacccggc gcaaggcttc gccaccaggt tctagaccca atcgcaattc gccatggggc
     6781 cgtcgcggct tacggcgcgg gttcattcca accgcacctt cttaattgtg agaagtaatt
     6841 ccccgccgat tccaatcgat aagaaaattt ccgaacgatc gtccgaaaac ttctgtttct
     6901 gcgcgcaagt ccgtccgtta acatctggca ttacccttgc gatgagtccg gccaatcgcg
     6961 ttgtaaggat ttatgacgcg acaaaatcga cgactcatca ggggggaacc atggctgagc
     7021 gcatcaccaa cttcgacgac tggaaagatt tattttacaa atggcaaaag gatatcggct
     7081 tcgatcccga gctggtcaag gattacc
//
LOCUS       DATIRS010000642         1909 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_244495, whole genome shotgun sequence.
ACCESSION   DATIRS010000642 DATIRS010000000
VERSION     DATIRS010000642.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1909)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1909)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1909
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_244495"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..375
                     /locus_tag="VLM90_08120"
     CDS             <1..375
                     /locus_tag="VLM90_08120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12969.1"
                     /translation="RGNQGEQNLRAAGPDGPEEPDGGEKTKNTSNPPGTEPGTKDGAP
                     QAPPPFQGGASTQVKGQLGVGESSGIVFKGKPTPGKSELSQQEIVASYQRQAEQELNS
                     ERVPEALKETIKNYFLSLGEKK"
     gene            463..1470
                     /locus_tag="VLM90_08125"
     CDS             463..1470
                     /locus_tag="VLM90_08125"
                     /inference="COORDINATES: protein motif:HMM:NF040105.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSQ12970.1"
                     /translation="MEAVNEIDQRIESARRSFDELRAEMARVIVGHEELVEQVFIALV
                     CGGHCLLEGVPGLGKTLMVRSLGEILSLSFSRVQFTPDLMPADITGTNVLTDDPSGRK
                     TFEFQRGPVFANIVLADEINRATPKTQSALLEAMQEQSVTVGGKGHRLENPFMVLATQ
                     NPSEMAGTYPLPEAQVDRFFFKLLLQYPSRADLGRIADLTTAAPLAAPREVLDAAAIL
                     HMRQWVREVPLADVVKDYAVRLILATHPQNEGSDRAVPLARRFVQYGSSPRGLQSLIL
                     AAKARALLAGRPNVSFEDIRAMLPPSLRHRLILNLEADAEGVSAEKILVEVIAHVPEV
                     E"
     gene            1521..>1909
                     /locus_tag="VLM90_08130"
     CDS             1521..>1909
                     /locus_tag="VLM90_08130"
                     /inference="COORDINATES: protein motif:HMM:NF013998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HSQ12971.1"
                     /translation="MAGSLPQILRRAAGKIPRFARNDNLSANKQQLSAFQPDTPDAGR
                     ETFFDTEFLRKLERLHLIAKRLSWAGAKGEHAASRKGFSLEFADYRRYQRGDDLRYVD
                     WNVYRRLERLLVKVFTAEEEMNIYLLV"
BASE COUNT          403 a          551 c          599 g          356 t
ORIGIN      
        1 cgagggaatc aaggggaaca aaacctgcgg gcggcgggac cggacggtcc ggaggaaccg
       61 gacggcggcg agaaaacaaa aaacaccagc aatccgccgg gcaccgagcc ggggacgaaa
      121 gacggcgcgc cgcaggcgcc gccgccgttc cagggcggcg cttcgaccca ggtcaaaggc
      181 cagctcggcg tcggcgaaag cagcggcatc gtcttcaaag gcaagcccac ccccggtaag
      241 agtgagctct cccaacaaga aatcgtcgcg tcctatcaac gtcaggcgga gcaggagctc
      301 aactccgagc gcgtgccgga agcgcttaaa gagacgatca agaattattt tttgtcgttg
      361 ggagaaaaga aatgaaccgg ttggagtaat ggagtgttgg agtgatgggc tttccgaacc
      421 cagcactcca acactccagt tgatccgagg agactttcgt ctatggaagc agtgaacgaa
      481 atcgaccaac gcatcgaaag cgcgcggcgc agttttgacg agctgcgcgc ggagatggcg
      541 cgcgtcatcg tcggccatga agagctggtc gagcaggtct tcatcgcgct ggtgtgcggc
      601 ggccattgtt tgctcgaagg cgtgcccggc ctgggtaaga ctctgatggt gcgcagcctc
      661 ggcgagattc taagtttgag tttttcgcgc gtgcagttca cgcctgatct catgccggcc
      721 gacatcaccg gcaccaatgt gctgaccgac gatccttcgg gacgcaagac cttcgagttc
      781 cagcgcggcc cggtgtttgc caatattgtc ttggccgacg aaatcaatcg cgccacgccg
      841 aagacccaat cggcgctgct cgaagcgatg caggagcaga gcgtcaccgt gggcggcaag
      901 gggcatcgct tggaaaaccc cttcatggtg ctggcgacgc aaaacccgag tgaaatggca
      961 gggacctatc cgcttcccga ggcgcaagtg gaccgctttt ttttcaaatt gctgctccag
     1021 tacccgagcc gcgcggatct ggggcgcatc gccgatctca ccaccgcggc gccgctcgcg
     1081 gcgccccgcg aggtgttgga tgcggcggcg atcttgcaca tgcgtcaatg ggtgcgcgaa
     1141 gttcccctcg ctgacgtggt caaggattac gccgtgcgct tgattctggc gacgcacccg
     1201 caaaacgagg ggagtgaccg cgccgtgccg ctggcgcgcc gtttcgtcca gtatggatcg
     1261 agcccgcgcg gtttgcagag tctaatcctg gctgcgaaag cgcgcgcgct gctagcggga
     1321 cgtcccaacg tgtccttcga agatatccgc gcgatgctgc cgccgagctt gcgccatcgc
     1381 ttgatcctca atcttgaggc ggatgcggaa ggcgtgagcg ccgagaagat tctcgttgaa
     1441 gtgatagccc atgtgccgga agtcgaataa ccatgggtct agagtctaga gtttggagtc
     1501 taaggtctcg agccggtcaa atggccgggt ctttgccgca gattctgcgc cgtgcggccg
     1561 gaaagattcc tcgctttgct cggaatgaca acctaagtgc gaacaagcaa cagctttctg
     1621 ccttccaacc cgacactcca gacgccggac gcgagacttt cttcgacaca gaatttttaa
     1681 gaaagctcga acgtctccat ctgatcgcca agcggctcag ttgggcgggc gccaagggcg
     1741 agcacgcggc ctcgcgcaaa ggcttcagcc tggaattcgc cgactatcgc cgctatcagc
     1801 gcggcgacga tctgcgttac gtcgattgga atgtttaccg gcgtctggaa cggctgctgg
     1861 tgaaagtttt taccgccgag gaggaaatga acatttacct cctggtcga
//
LOCUS       DATIRS010000643         1520 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_244687, whole genome shotgun sequence.
ACCESSION   DATIRS010000643 DATIRS010000000
VERSION     DATIRS010000643.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1520
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_244687"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            232..1380
                     /locus_tag="VLM90_08135"
     CDS             232..1380
                     /locus_tag="VLM90_08135"
                     /inference="COORDINATES: protein motif:HMM:NF014460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSQ12972.1"
                     /translation="MEVQTLSDDTSEVALETEGDATLVVQLSGAWRLQKSAASAGQVQ
                     KALESSHIRRVRFEAKALSSWDSSILMFLMKVIELCRQQDIVTEREGLPDGIRRLLEL
                     AEIAPEQEGARPAADAQSFLAQVGTTSTGFYLSLSEMLHFLGEVTLAFVKLVRMRARY
                     RSADLFLIIQECGPQALPIVTLISFLVGVIMAFVGAVQLQQFGAQLYVADLVGIAVVR
                     DMGAMMTGIIMAGRTGAAFAAKLGTMKVTQEIDALITLGFSPLEFLVLPRVIALCLMM
                     PLLCLYSDLLGILGGAAVGLWMLDLSWTTYYHQTVNAISLTALFGGVFKSVTYGVLIA
                     LSGCLRGIQCGGSASAVGEAATSAVVTSIVFIVAACGALSVIFYIIGV"
BASE COUNT          295 a          407 c          456 g          362 t
ORIGIN      
        1 gtcagcaaag ggagcttgag cggctgcgaa gagagcgcgc agagtattaa aggtttcagc
       61 cgattcttca atatcagtgg gaaactacgc gtgatccatc ggttaggaga ccacggacct
      121 gaacggcggc gccaacttgc cgatcgtagc accacaataa gaatttagcg ggtcattgct
      181 atcggcccct gtcagggcgc tctccctgta ttatcgggtt ttttaccggc gatggaagta
      241 cagactctta gtgacgatac gtcagaggtt gcactcgaga ctgagggtga tgccacgctc
      301 gtcgtgcaac tgtcaggcgc ctggcgacta caaaagagcg ccgcctctgc cggccaggtg
      361 caaaaagcgc tcgagagttc gcatattcgc agggttcgct tcgaggcaaa agctctctca
      421 tcttgggaca gcagcatcct gatgtttttg atgaaagtga tcgagctctg ccgccagcag
      481 gacatagtca ccgagcgcga aggattgccg gacggcattc gccgtctgct tgaactcgct
      541 gagatagcac cggagcagga aggcgccaga ccggcggcgg atgcgcagtc ttttttggca
      601 caggtcggta ccacatcgac ggggttttac ctctctttgt cagagatgct gcactttctc
      661 ggcgaggtga cgttggcctt cgtcaagctg gtcaggatgc gggcgcgcta ccggagcgcc
      721 gatctatttc taattatcca agaatgcggc ccgcaagcgc tgccgatcgt cacgctcatc
      781 agctttttag taggcgtgat catggcattt gtcggcgctg ttcagcttca gcaattcggc
      841 gcccagctct atgtggcgga cctcgtcggc atcgccgtcg tccgcgatat gggcgccatg
      901 atgaccggga tcatcatggc gggccggacc ggcgccgcgt tcgcagccaa gctcggcacc
      961 atgaaggtga ctcaggaaat cgacgcattg atcacgctgg gattctcacc gctggaattt
     1021 ttggtgttgc cgcgcgtgat cgcgctgtgc ctgatgatgc ctttgttgtg tctgtattcc
     1081 gacctgctgg gaatcctggg cggcgccgcg gtggggctgt ggatgctcga cctttcgtgg
     1141 accacctatt accaccaaac ggtaaatgcg atcagcctaa cggcgctgtt cggcggcgtc
     1201 tttaaaagcg tgacttacgg cgtgctgatc gctctttcgg gatgtctgcg cggcatccag
     1261 tgtggtggca gcgcttcggc tgttggcgag gccgcaactt ccgccgtggt cacgagcatc
     1321 gtctttatcg tcgcggcttg cggcgctttg tccgtgatat tttatatcat tggggtttga
     1381 catgaatagt gaatgtccaa acgaaatcgc cgccgaagcg caaattaccg tgcgcaatct
     1441 taccatggcc tatggctcct tcgtcttgat gcgcgatctc aactttacgg ttaagcgggg
     1501 agacgtgttc atcattatgg
//
LOCUS       DATIRS010000644         1534 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1523455, whole genome shotgun sequence.
ACCESSION   DATIRS010000644 DATIRS010000000
VERSION     DATIRS010000644.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1534
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1523455"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(434..>1534)
                     /locus_tag="VLM90_08140"
     CDS             complement(434..>1534)
                     /locus_tag="VLM90_08140"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12973.1"
                     /translation="ILGGYLVEHVHWRAIFYINLPTGLLSIVAGYYILPRTKSQAAAA
                     PLDAFGLITMIGATIALLLALSMGQEEGWSSRFIVGLFIAAAILTALFLVAETRVKQP
                     FLELSYFRNTNFTIANILIFLRVFAFRGASFLVSLFLQKALNYSPTQAGIFLLPGAVI
                     TGLWSPLAGSLSDRLGPRIPIVSGFVILFIAVYGLSTMTLWTTVTMIFVFLCLKSVGE
                     SSLNAPLNTLALGALPEGRARMGSGIIGMSRGLGEAFGVGVFSFLLERSAYLNLYSIP
                     PLQGAAFVANERFEALAHIRGLLIQAGQFAVAVEQRAESLLAHSLITQALALAYQDLF
                     FVIALIYVGLMALAFFLRAPKARTDLQPDRHE"
BASE COUNT          369 a          427 c          466 g          272 t
ORIGIN      
        1 tgcacggcat cggctcgggc catgtggcgc gtcaatcgag ttcgcgcgtg acgctttacc
       61 acgacaccga tcatccgtcg catttactcc tgcccgtgac gcgcggcaac cgcatcggca
      121 catttatctc cggtggccgg attaccacct agagcgggtg ggattcgatg ccgggattcg
      181 acatgactcg gtattctcgc gtggattgga tggtgattct gcggacagca ggaaaagcat
      241 ttctcgctca gcgcggatca gccgtccaac gacattgcac cgacccggtc tgaatccggc
      301 ggcaaaatga aaatccgcga ttgtaaaagc gcggccgttc aagagttcaa agttagttgc
      361 ggaatccggc gtgaattttg aaccgttgga ccatgaacgg tttccaaagc ggctcaaggt
      421 tgatctctac cgtttattcg tgccggtctg gttgtagatc ggttctcgcc ttaggcgcgc
      481 gcaagaaaaa tgcgagggcc atcagtccta catagatgag cgcgatgacg aagaacaagt
      541 cttgataggc gagcgcgagc gcttgggtga taagcgagtg ggcgagcagg gactcggcgc
      601 gctgttccac ggcgacagcg aattgaccgg cctgaatcaa aagcccgcgg atatgtgcca
      661 gcgcttcgaa gcgctcgttg gcgacaaacg ccgcgccctg tagaggcggg atggagtaaa
      721 gattgaggta ggcggagcgc tcgagcaaaa aactgaaaac gccgacgccg aacgcttcgc
      781 ccagtccccg gctcatgccg atgatgccgc tgcccatgcg cgcccggccc tccggcaacg
      841 cgcccagcgc cagagtgttg agcggcgcat tcaagctcga ctcgccgacg ctcttcaagc
      901 acaagaaaac gaagatcatc gtcacggtgg tccagagcgt catcgtcgac aggccgtaaa
      961 ccgcgataaa gagaatgacg aaaccggata cgatcgggat gcgcggaccc aaccggtcgc
     1021 tcaagcttcc cgccaacggc gaccacaggc cggtgatcac cgcgccgggg agaagaaaaa
     1081 tcccggcttg ggtggggcta tagttgagcg ccttttgcag aaacagcgaa accagaaaac
     1141 tggcgccgcg aaaggcaaag acgcgcagga aaatcaaaat attggcgatg gtgaaattag
     1201 tgttgcgaaa ataactgagc tccaagaaag gctgcttcac tctagtttcc gccaccaaga
     1261 agagcgcggt gagtatggcg gcggcgatga aaaggccgac gatgaatcgg ctgctccagc
     1321 cctcctcctg acccatgctg agagccagca gcagcgcgat ggtcgcgccg atcatcgtga
     1381 ttaagccgaa ggcatccagg ggcgccgctg ccgcctgaga tttcgtccgc gggagaatgt
     1441 aatagccggc gacaatgctc agcagcccgg tcggcagatt gatgtaaaag atcgcgcgcc
     1501 aatggacatg ttcgaccaga tagccgccga gaat
//
LOCUS       DATIRS010000645         1922 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_442097, whole genome shotgun sequence.
ACCESSION   DATIRS010000645 DATIRS010000000
VERSION     DATIRS010000645.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1922
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_442097"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..581)
                     /locus_tag="VLM90_08145"
     CDS             complement(<1..581)
                     /locus_tag="VLM90_08145"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ12974.1"
                     /translation="MNFCLHGSARTVNEAVERAKRAEALGFEAIFFADSQMNNVDPYQ
                     AMALCAVNTKTIRFGTAVTNMVYRDPTITACSYATLNEISGGRAIVGMGTGDGPVYSL
                     GRTATKLVDFEKGLRVIRDLLHDRGIDIPKSHERQGGVVKLKAGKRPVPIYISAEGPK
                     TLRVAGRTCDGVILGTGFDKQVTDWARQRLTEGA"
     gene            complement(651..>1922)
                     /locus_tag="VLM90_08150"
     CDS             complement(651..>1922)
                     /locus_tag="VLM90_08150"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12975.1"
                     /translation="RPKFFYGYVIIALCFANMVVMRGVNGAFGVYFLALLEEFPWSRS
                     AGASIASVNFFVYAIASPLVGLAFDRYGPRLLMPLGAFLTGLGLVLSSFAHSLGGLYF
                     TYGIVTALGQGALSFVGHNALISFWFVRKRATAIGIASMGQGLGALVMVPTTQLLVSA
                     IGWRWTYVATGALLLLILVPANAFFQRRTPAEVGQFPDGDAAPTSGPTAVRHGAKHAG
                     QRDWTLGQAARSFPFWCITIGHLALGTALFMINTHAIAHFVAVGYQKLAASFYFGFIG
                     FIRIGATLIWGSLSDRLGRSQTYAVATAVTALGVAGMIAMTFSAPLWLVYLTIALYGI
                     GHSAGNPTYGSVIGDIFSGRKIGLIFGFLEISFGFGSAFGSWIGGYLFDTTGSYAWSF
                     GVCLLCYIISGLAIHLCVRWHAKNELKMDNG"
BASE COUNT          410 a          547 c          635 g          330 t
ORIGIN      
        1 gcgccttcgg tgagtcgttg gcgcgcccag tcggtgacct gcttgtcgaa gccggttccc
       61 agaatgacgc catcgcaggt gcggccggcg acccgcaggg ttttcggccc ttcggccgag
      121 atatatatcg gcacgggccg cttgccggct ttcaatttaa ccacgccgcc ttggcgctca
      181 tggctcttcg gaatgtcgat gccgcggtca tggagcaggt cgcggatcac gcgcagccct
      241 ttctcgaagt cgacgagctt ggtcgcggtt cggcccaggc tgtaaaccgg cccatcgccg
      301 gtgcccatgc cgacgatggc gcggccgccg gagatttcat tcagcgtcgc gtaggagcac
      361 gccgtgatcg tcggatcgcg gtagaccatg ttggtcaccg cggtgccgaa gcggatggtt
      421 ttcgtgttga cggcgcacag cgccatcgct tggtaggggt cgacgttgtt catctggctg
      481 tcggcgaaaa aaatcgcctc gaagccgagg gcttcggcgc gtttggcgcg ctcgaccgct
      541 tcgttcaccg tgcgcgccga accatgtaga cagaagttca tataagctcc ttcaaatgga
      601 taatggataa ttgaaaatgg agaatgactt ctcggactgg caatttttca ttatccatta
      661 tccattttca attcattctt cgcgtgccaa cgaacgcaca ggtgaatcgc caggccggag
      721 atgatgtagc agaggaggca gacgccaaac gaccaggcgt agctgccggt ggtgtcgaac
      781 agatagccgc cgatccagga gccgaaggcg ctgccgaagc cgaagctgat ttccaaaaat
      841 ccgaaaatca ggccgatctt gcggccggaa aaaatgtcgc cgatgaccga gccgtaggtt
      901 gggttgccgg cgctgtggcc gatgccgtag agagcgatgg tgagatagac cagccagagc
      961 ggcgcgctga aggtcatggc gatcatgccg gcgacgccga gtgcggtgac ggcagtggcg
     1021 acagcgtagg tctggctgcg gccgaggcgg tcagaaagcg aaccccatat caacgtcgcg
     1081 ccaattcgga tgaatccaat gaagccgaag taaaaagatg ccgccagctt ttggtagccg
     1141 acggcgacga aatgggcgat ggcgtgggtg ttgatcatga acagcgcggt gcccagcgcc
     1201 aagtggccga tggtgatgca ccagaatgga aacgagcgtg ccgcctggcc gagtgtccag
     1261 tcgcgctggc ctgcgtgttt cgcgccatgc cgtacggcgg tggggccgct cgtcggcgcg
     1321 gcgtcaccgt cgggaaactg gccgacctcc gccggcgtgc ggcgctggaa gaatgcgttg
     1381 gccggaacca atatgagcag gagaagagcg ccggtggcga cgtaggtcca tcgccagccg
     1441 atggcgctga ccagcaattg cgtcgtcggc accatcacca gtgcgcccaa cccttggccc
     1501 atggaggcga tgccgatggc ggtggcgcgc ttgcgcacga accagaatga gatcagcgca
     1561 ttatggccga cgaaactgag ggcgccttgg cccaaggcgg tgacgatgcc gtaggtgaaa
     1621 tacaggccgc cgagggagtg cgcaaaagat gacagcacca gcccaaggcc ggtcaggaac
     1681 gcacccaagg gcatgagcag ccgcggccca tagcggtcga aggcgagtcc caccagcggc
     1741 gaggcgatgg cgtagacgaa aaagttcacc gacgcgatgc tagcgcccgc gctgcgcgac
     1801 caagggaact cttccaacaa agcgagaaag taaactccga aggcgccatt cacgccgcgc
     1861 atcaccacca tgttggcgaa gcatagagcg atgatgacgt aaccgtagaa gaacttgggg
     1921 cg
//
LOCUS       DATIRS010000646         2807 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1031971, whole genome shotgun sequence.
ACCESSION   DATIRS010000646 DATIRS010000000
VERSION     DATIRS010000646.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2807)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2807)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2807
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1031971"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..733
                     /locus_tag="VLM90_08155"
     CDS             <1..733
                     /locus_tag="VLM90_08155"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HSQ12976.1"
                     /translation="WNLSGVTPTGYQLVPILVYHDLAPQAKGRMVMGAKGFEEQMRYL
                     KANGYRVISLKEYVEFVSLQRQLPKKSVLITFDDGYRSFLRHAYPLLKELGFSATLFI
                     YTDYVAAGGNAFTWAELKKLSDEGFAIQAHSKSHGDMVRANAEGAAEYDRRLEAELVQ
                     PKALFQKNLGYAPDIIAYPYGRQDDAVVRRAKERGYVAAFTVRRQGSQSFVDPHRIHR
                     IQIYPEMRMDDFVKSLSVFSQESIK"
     gene            730..1860
                     /locus_tag="VLM90_08160"
     CDS             730..1860
                     /locus_tag="VLM90_08160"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HSQ12977.1"
                     /translation="MINSRRTRTIGLIAGVWLLAGCAAAGPGGSGPATYEALVAPQRE
                     RAAALAAQGNLRGASDAWKVALTIDPQDAVALAESRKLDEQIKQSVGDRLSRGRDALK
                     RNVHLEARSHFLAVLALEPGNREAFEALQSQVREVRQVNHTVRAGDSLTSIAQLYYGD
                     RTRSEVIWETNQLPPNPKLAPGTVLKIPEIPGLPFGRPEPAPTAKTPPSGGVPATPAK
                     TEQSEEELYANPALGAAREALERGELVLALTTVDRFLGQNPRNSEATDLRRTVLLQQG
                     RTLMEQNKLLDAYAAVNQLVKANPKDSAATSLLSQVRGRLVQQHYNQGMQLFREEKLP
                     AAVAEWRTVLQYDPAHDGAKRNIDQAQRLLKGLQERQQKQGK"
     gene            complement(2084..2299)
                     /locus_tag="VLM90_08165"
     CDS             complement(2084..2299)
                     /locus_tag="VLM90_08165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12978.1"
                     /translation="MTLCQSIFMALARTESKFFGLGKLPLVEVPHHPSGGARAGEHRA
                     DAEGAIDLVNSQLTLGAPGGFKRSKLG"
     gene            complement(2363..2650)
                     /locus_tag="VLM90_08170"
     CDS             complement(2363..2650)
                     /locus_tag="VLM90_08170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12979.1"
                     /translation="MAKLKFLDPRAVVNPQERPLVPGLDSLDGKIIGIIDNGQSNSTD
                     MFKELGKLLQERLHVKEVLFKTKPTHMQGAPKPIMEEIVNRCDAVITGLGA"
BASE COUNT          611 a          807 c          821 g          568 t
ORIGIN      
        1 gtggaatctt tccggtgtga cgccgaccgg ctaccagttg gtgccgatcc tggtctacca
       61 tgatctcgcg cctcaggcga aaggccgcat ggtgatgggc gccaaaggtt tcgaagagca
      121 gatgcgctat ctcaaggcca acggctatcg cgtcatttcg ctgaaagagt atgtcgagtt
      181 tgtttcctta cagcgccagt tgcccaagaa aagcgtgttg atcaccttcg acgacggcta
      241 ccggtcgttc ttgcgccacg cctatccgct gctcaaagag ttgggtttct cggcgacgct
      301 gtttatttat acggattacg tcgccgccgg cggcaacgct tttacctggg ccgaattgaa
      361 aaaattatct gacgagggct ttgccatcca ggcgcattca aagagccatg gcgacatggt
      421 gcgcgccaat gccgaaggtg ccgcggaata tgacaggcgt ttggaagcag aactggtcca
      481 gcccaaggcg ctgttccaaa aaaatctcgg ttacgctccc gacatcatcg cctatcctta
      541 cggccggcag gacgacgcgg tggtgcggcg cgccaaggaa cgcggttacg tcgcggcatt
      601 cacagtgcgg cgccagggta gccagtcgtt tgtcgatccc catcgcatcc accggattca
      661 aatctatccg gaaatgcgca tggacgattt cgttaaaagt ctcagcgtct ttagccagga
      721 aagcattaag tgatcaattc ccgacgaaca cggacgattg gactgattgc cggcgtgtgg
      781 ttgctcgccg gatgtgccgc cgccgggccg ggtggcagcg ggccagcgac ctatgaagct
      841 ttggtcgcgc cgcaacgaga gcgagccgcg gcattggcgg cgcagggaaa cctgcgtggc
      901 gcgagcgacg cctggaaagt cgcgctgacc atcgatccgc aggatgccgt tgctttggcg
      961 gaaagccgaa agctcgacga gcaaatcaag caatctgtcg gcgatcgttt aagccgcggc
     1021 cgcgacgcgc tcaagcgcaa tgtgcatctc gaagcgcgca gccactttct cgccgtgctc
     1081 gccttggagc cgggcaatcg cgaagccttc gaagctttgc agagccaagt gcgcgaggtg
     1141 cggcaagtca atcacacggt gcgtgccggc gactcgttga cgtcgatcgc gcagctgtac
     1201 tacggcgacc gcacccgttc cgaagtgatc tgggaaacca accagctgcc gcccaatccg
     1261 aaactggcgc ctggtacggt tttaaaaatc ccggagattc ccgggctgcc gttcggaaga
     1321 ccggagccag cgccgaccgc gaaaactccg ccgagcggcg gtgttccggc aactcccgca
     1381 aagacggaac agtcggaaga agagctatac gccaacccgg cgctcggggc ggcgcgcgaa
     1441 gcgctcgagc gcggcgaatt ggttttggcg ctaacgaccg tcgaccgctt cctcgggcag
     1501 aatccgcgca atagcgaagc caccgatttg cgacgcacgg ttttgctgca acagggccgc
     1561 acgctgatgg agcagaacaa attgctggac gcctacgcag cggtcaacca actggttaaa
     1621 gccaatccga aagactcggc agcgacatcg ttattaagcc aggtgcgcgg tcgcttggtg
     1681 cagcagcact ataaccaagg catgcaactg ttccgcgaag aaaaactccc tgccgcagtc
     1741 gccgaatggc gcacggtttt gcaatacgat ccggcccacg acggtgccaa aagaaacatc
     1801 gatcaagccc aaaggctgct caaaggctta caggagcggc agcagaagca gggcaagtag
     1861 caatttaaga cagttgtgcc tgcgacacgt cgaacgttac tttgcatttg aaccctttac
     1921 ttgagttggg acaatttctg acacgcggga ggtaagtttc gcgtcatagt cgagcgggaa
     1981 cttaccggct cggacgtttc cagtgaacga attaaaacgc cctcggcgtg gcaccgaagg
     2041 cgttcgcttt aggtgggatt ggcggcaacg ttgatcgctt gctttatccc agcttggacc
     2101 gcttgaaacc tccaggcgcg cccaaagtca gctggctgtt gaccaagtcg atcgcgcctt
     2161 cggcgtcggc tcgatgctcg ccggcgcggg caccgccgct cggatgatgc gggacttcta
     2221 ctagcggcag tttacctaag ccgaagaact tcgattcggt gcgcgccagt gccatgaata
     2281 tcgactggca tagggtcacc gtcggcttgc ctttctcttg cagttcgatg gcgtcgtgga
     2341 cactccacga cgtgcacgac cctcaagcgc cgagaccggt aatgaccgcg tcacagcggt
     2401 tgacgatctc ctccatgatc ggtttgggcg cgccttgcat atgggtcggc ttggtcttga
     2461 acaacacttc tttgacgtga agccgttctt gaagcagctt gcccaactcc ttgaacatat
     2521 ccgttgaatt cgattggccg ttgtcgatga tgccgatgat cttgccatcg agggagtcca
     2581 aacccggcac caacggccgc tcttggggat tcaccaccgc tcgtggatcg agaaacttta
     2641 gtttcgccat gctttgcaat cctccttgta acgttaaccc ggcaaaatga aatggtttta
     2701 tatacatacg caaagtcgac cggagcctgc aactggtgtg aacgataggc agttggcaaa
     2761 cagctttaca tcgttaggct cgggctatca atcagcccac cgggcga
//
LOCUS       DATIRS010000647         1874 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_442100, whole genome shotgun sequence.
ACCESSION   DATIRS010000647 DATIRS010000000
VERSION     DATIRS010000647.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1874
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_442100"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..365
                     /locus_tag="VLM90_08175"
     CDS             <1..365
                     /locus_tag="VLM90_08175"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HSQ12980.1"
                     /translation="PGSGGTQRLTQVLGKHRAMELVLTGDMLSATDAERLGLVNRIVP
                     VELLLEEAKNVARKIAAKPVLATKAAKEAVLKSANLPLDEGLEFERKSFYLLFASEDR
                     TEGMKAFLEKRKPVFTGK"
     gene            383..1162
                     /locus_tag="VLM90_08180"
     CDS             383..1162
                     /locus_tag="VLM90_08180"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HSQ12981.1"
                     /translation="MAYETIIYEKQNGVAAITLNRPQALNAFVPQMNKEVLEALKDGE
                     REKEVRCFMITGAGRAFCAGQDLKVRTPEQKGSLGASLREKYNPMIRQIRQMEKIVIA
                     AVNGVAAGAGCNFALACDLRVASEEAKFIQSFVRVGLAPDSGGSFILPRLVGLSKAME
                     LLLLGDTVDSKEAQRIGLVARVFPAAEFAASAREIAERVAKAPRGVGLIKRAMNHANL
                     ANLEADLEYEAHLQEIAGRSSDYDEGVKAFLEKRTPVFTGE"
     gene            1240..>1874
                     /locus_tag="VLM90_08185"
     CDS             1240..>1874
                     /locus_tag="VLM90_08185"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HSQ12982.1"
                     /translation="MATKTEKIAVLGAGTMGAGIAQVAAQAGFETLVYDVKQEFIDTG
                     LGRVRSFLQGSRERGKISAEQEREILDRFRTTTSLEECRGSALVIEAAPEKLDLKRDI
                     FQQLDSVCAPETLLASNTSSFNVTAIAASTKHQERVLGLHFFNPPPLMALVEVIQGDR
                     TSAAAIDKATELMRAMGKTPARAKDTPGFIVNRIARPFYNEGLRILGDGDAS"
BASE COUNT          428 a          552 c          564 g          330 t
ORIGIN      
        1 ttcccggcag cggcggaacc cagcggctaa ctcaagttct gggcaaacac cgcgccatgg
       61 agctggtatt gaccggcgac atgctcagcg ccaccgacgc ggagcgtttg gggttggtca
      121 atcgcatcgt gccggtcgaa ctgcttttgg aggaagccaa aaacgtcgct agaaagatcg
      181 ccgcgaaacc cgtgctggcg actaaagcgg ccaaggaagc agttctcaaa tcagccaacc
      241 taccgctcga cgagggcctc gaattcgagc gcaagtcctt ttatttgctg tttgcctccg
      301 aagaccgcac cgaaggcatg aaagcgtttc tggaaaaacg caaacccgta ttcactggaa
      361 agtaaagaag cgagattacg tcgtggccta cgagaccatc atctacgaga agcagaacgg
      421 cgtggcggcg atcacgctca accggccgca ggcgttgaat gccttcgtgc cgcagatgaa
      481 caaagaagtc ctcgaagcgc tcaaagacgg cgagcgcgaa aaagaggtgc ggtgttttat
      541 gatcaccggc gccggccggg cgttttgcgc cggtcaagat ctcaaggtcc gcacgccgga
      601 gcaaaaagga tccttgggcg cgtcgctgcg cgaaaagtac aatcccatga tccgccaaat
      661 ccgccagatg gaaaagatcg tcatcgccgc ggttaacggc gtcgccgccg gcgccggctg
      721 caactttgcg ctcgcctgcg acctgcgtgt cgcatcggaa gaagcaaaat ttatccaatc
      781 gttcgtgcgc gtcggtttgg cgccggattc cggcggcagc ttcatcctgc cgcggctggt
      841 cggactgagc aaagcgatgg agcttttgct gctcggcgat accgtcgatt ccaaagaggc
      901 gcagcgtatc ggcttggttg cccgagtttt tccggcggcg gaattcgccg cctcagcgcg
      961 ggagatcgcc gagcgagtcg ctaaggcgcc gcgcggcgtc ggcctcatca agcgagcgat
     1021 gaaccatgcc aacctggcaa atctggaagc cgatctcgag tatgaagccc atttacaaga
     1081 aatcgccggc cgaagctcag actacgacga gggcgtgaaa gcgttcctag aaaaacgcac
     1141 gccggtgttt accggggaat aagcgtctag agtccagagt tcagcgtctc gggtttcaac
     1201 cctagacgcg cgacactagg ccccgaacgg gaaatcataa tggccaccaa aaccgaaaaa
     1261 atcgccgtcc tcggcgccgg caccatgggc gcgggcatcg ctcaggtagc ggcgcaggcc
     1321 ggtttcgaga cgcttgtgta cgatgtcaaa caggagttta tcgacaccgg gctgggccgc
     1381 gtgcggagtt ttctgcaagg cagccgcgag cgcggtaaga tcagcgcgga acaggaaaga
     1441 gagatactcg atcgctttcg caccacgacg agtctcgaag agtgcagagg cagcgcgctg
     1501 gtcatcgagg ccgcgccgga gaaactcgat ctcaagcgcg atatattcca acagctcgac
     1561 tcggtgtgcg cgccggagac gctcctagca agcaacacat cgtcgttcaa cgtcacggcc
     1621 atcgccgcca gtactaaaca tcaagagcgc gtgctcggtt tgcatttttt caatccgccg
     1681 ccgttgatgg cgctggtgga agtgatccag ggcgaccgca ccagcgcggc ggcgatcgac
     1741 aaagccaccg agcttatgcg cgccatgggc aaaactcccg cgcgcgccaa ggacacgcct
     1801 ggcttcatcg tcaatcgtat cgccaggcct ttttacaacg aaggtctgcg tattctcggc
     1861 gacggcgacg cctc
//
LOCUS       DATIRS010000648         2417 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_933425, whole genome shotgun sequence.
ACCESSION   DATIRS010000648 DATIRS010000000
VERSION     DATIRS010000648.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2417)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2417)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2417
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_933425"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(142..1122)
                     /locus_tag="VLM90_08190"
     CDS             complement(142..1122)
                     /locus_tag="VLM90_08190"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12983.1"
                     /translation="MILRILIGVVIIILLGSVDLSAQSRKVRVAMPGYTIAGLSFLTA
                     KLNGYYTGEGLDVELIAMRAPTANLAVLSGSVEFSTVPLVGLNTALRTGALKVLMVHF
                     DKPQHVLFARNELQNLKLLRGKKLAVSGPGVIDDLILREVLTANGIDASRDLTILSMG
                     AADTRVNSLISGAVDGAMIIAPFTFTAKDAGFRELVVFREQGLLLPGGGIVARDEMLR
                     ADAPLVERFVRASMMGFLYSRDNRGGAIKVLSRSLKIDDGIAAKIYDSSRPTMTADGT
                     SSEEAQKKMAAFVAKTAGLKEIPPMEKVFDFSFVRKANAALQAKGWQPGS"
     gene            1246..2121
                     /locus_tag="VLM90_08195"
     CDS             1246..2121
                     /locus_tag="VLM90_08195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSQ12984.1"
                     /translation="MLSLTRMVILCVVLLCAAGTPAQERFSFFQASTPESVERMLKLA
                     NLRDDDIIVDLGSGDGLIVLTAAKMNAKLRGWGVDVDQKLIAESNGVAKAQGVADRVK
                     FFHQNAFDADLREATVITLWLFPELMRLLRPIIFERARPGTRILTSTWDLGTWPADKI
                     DAGNPSIHLWTVPARVAGNWSWEFSLADQRVAYAAVLDQQFQAAEGVVRAGANREVLT
                     DVKLTGENISFDLAMTLEGFGLTRHEFTGKVRGDRIEGSAQVVLPDGNRIELPWHASR
                     TEASHYFAPTGTALP"
BASE COUNT          540 a          757 c          635 g          485 t
ORIGIN      
        1 ccctggctga cggtcagcgc catgccgtcc aaactcaagc gctcgccgaa acccatcgaa
       61 ttaaccgggt gataggccag tgtcagttgc ataagactct ttcgcagcaa actttagtgc
      121 cggagcaagg attttatcaa ttcacgaacc cggctgccag cctttggctt gcagcgccgc
      181 gttggctttg cgcacgaatg agaaatcgaa taccttttcc atcggcggga tttctttcaa
      241 tccggcggtc ttagcgacaa aggccgccat tttcttttgc gcctcttcag atgaagtacc
      301 atcggcggtc atggtcggtc tggacgaatc gtaaattttg gcggcgatgc catcgtcgat
      361 ctttagactc ctggacaaca ccttgatcgc gccgccgcga ttgtcgcgcg agtaaagaaa
      421 tcccatcatc gacgcgcgca cgaagcgctc caccagtggc gcatcggcgc gcagcatctc
      481 atcccgagcc acgatgccgc ctcccggcag cagtagaccc tgctcgcgaa acaccaccag
      541 ctcgcggaag ccggcgtcct tggcggtaaa ggtaaacggc gcgatgatca tcgcgccatc
      601 cacggcgccg ctgatcaaac tgttcacccg cgtatccgct gcgcccatgc tgagaatcgt
      661 caagtcgcgg ctggcgtcga tgccattggc agtcaaaacc tcgcgcaaga tcaagtcgtc
      721 gatcacgccg ggtccggaca ccgccagctt tttaccgcgc agcaatttca aattttgcag
      781 ctcgttcctg gcaaacaaca catgctgcgg cttgtcaaag tgtaccatta ggacctttaa
      841 agcgccggtg cgcagcgccg tgttaagccc caccagcggc acggtggaaa actccacgct
      901 gccgctcagc acggcgagat tggccgtcgg cgcgcgcatg gcgatcaact cgacgtccaa
      961 gccttcgccg gtgtaataac cgtttaactt cgcggtgaga aacgacaggc cggcgatggt
     1021 gtaccccggc atcgccactc gaactttgcg gctttgcgcg cttaggtcga cggaacccaa
     1081 caaaatgata ataacgacgc cgatcaatat ccgaagaatc atgttggcag ctcccaccgt
     1141 tgctttgcgc ctcgactgca cgagatgtaa ttgggcagag agcgcttgtc aattgaccac
     1201 cgggaaagaa ttggttactc aatcaagacc gcaacggaga caaacatgct tagtttaacc
     1261 cggatggtca tactctgtgt cgttctgctt tgcgccgccg gcacacccgc ccaagagcga
     1321 ttttcgtttt tccaagcgag cactcccgag agcgtcgagc gcatgctcaa gctcgccaac
     1381 ctgcgcgacg acgacataat cgtcgacctc ggatcgggcg acggcctcat cgtcctcacc
     1441 gcggccaaga tgaacgcaaa actgcgcggc tggggcgtcg atgtcgacca gaagctgatc
     1501 gccgaatcca acggcgtcgc caaagcccag ggcgtcgccg accgcgtaaa atttttccat
     1561 cagaacgcct tcgacgccga cctgcgcgaa gccacggtga tcaccctgtg gttattccca
     1621 gaactcatgc gcttgctcag gccaatcatt ttcgagcgag cgcgcccagg cacacgcatc
     1681 ctaaccagca cctgggacct cggcacttgg cccgccgaca agatcgacgc cggcaatcct
     1741 tcgatccatc tctggaccgt gccggcacga gtcgccggca actggagctg ggaattttcc
     1801 ctagccgacc agcgcgttgc ctacgccgcg gtgctagacc agcaatttca agccgccgaa
     1861 ggcgtcgttc gcgccggcgc caaccgcgaa gtgctaaccg atgtgaagtt gaccggcgag
     1921 aatatctcct tcgatctcgc catgactctc gaagggttcg gcctcacccg tcacgagttc
     1981 actggcaaag tccgcggcga ccgcatcgag ggcagtgctc aagttgtctt acctgacggc
     2041 aatcgtattg aactgccctg gcatgcgtcg cgcacagaag catcacacta cttcgcgccc
     2101 accggaacgg ctctgccata gcgttgatgt aatgattcgg gttagcaagc tcccacttca
     2161 tcggggatgc gattaacctt aaatatgtca tttcgagcac ggcgtgaaat ctcgtctgga
     2221 tctccttaag caaagggaag tcaaactcaa cccgaattcg acgcaaactc cacgcaaccg
     2281 ttgcttgaca tccgccctcg ctcggcatta cgctcggcaa atcggaggga caatcatggc
     2341 gaaaaaaggc tttaaagttt tcgacagcga catgcatatc atggagccgc ccgatctttg
     2401 ggagcgctac atcgatc
//
LOCUS       DATIRS010000649         2233 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_933443, whole genome shotgun sequence.
ACCESSION   DATIRS010000649 DATIRS010000000
VERSION     DATIRS010000649.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2233
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_933443"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..440
                     /locus_tag="VLM90_08200"
     CDS             <1..440
                     /locus_tag="VLM90_08200"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HSQ12985.1"
                     /translation="EVTSPDNIVVQGRLENGAIVNACCGVQPYHGSGHRLEIYGRDGT
                     LSMIGGGEGGEERRRKLMGGHKDDKTPQELAVPERFTWVPEAVRDGGPAYDVGQMWVK
                     FAEAIRTGSNIEADFDHAVRRHRMLDTIVRASQTGQRQKVELR"
     gene            702..1424
                     /locus_tag="VLM90_08205"
     CDS             702..1424
                     /locus_tag="VLM90_08205"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HSQ12986.1"
                     /translation="MTITSHDIKVMTSGAFTAAYLELIPQLEALTQKKIVTAATSIGT
                     GETSIPSRLKRGEAVDVIIVADGVLTGFIKDGLVLAESYTPLVRSAIGMAVRAGAAQP
                     DIGSVDALKRTLLQAKSIAYSASVSGEYLTKELYQRLGIVDQVMGKSRLIGGGERVGA
                     VIARGEADIGFQQMSELMPVPGIAHVTPLPAEVQKVSVFSAGIAKSTTDAATARAVIK
                     FLASPEAASAITKSGLEPIEKR"
     gene            complement(1510..1998)
                     /locus_tag="VLM90_08210"
     CDS             complement(1510..1998)
                     /locus_tag="VLM90_08210"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSQ12987.1"
                     /translation="MPKITSISHIVLYVKDLDKMVDFYTNMLGLVKYRENANRMVFLT
                     PDPELDDHQLALVKGREGDAKLIAHIAWKVETPAEIKEFYERFIAHGVPIDHCVSHAY
                     EEMGNTVSCYFLDPEGNRLEVYALVAERDAARENRPLDLDKSLSEIVAVASGRAPASS
                     AH"
BASE COUNT          464 a          617 c          693 g          459 t
ORIGIN      
        1 tggaagtcac ctcgcccgac aatattgtgg ttcagggccg gctcgaaaac ggtgccatcg
       61 tcaatgcctg ctgcggcgtg cagccgtacc acggcagcgg ccaccgcctg gagatttacg
      121 gcagggacgg cacgctgtcg atgatcggcg gcggtgaggg cggcgaggag cgccggcgca
      181 agctcatggg cggacacaaa gacgacaaga cgccgcaaga gttggccgtg ccggagcgct
      241 tcacctgggt gccggaagcc gtgcgcgacg gcggtccggc gtacgatgtg ggccagatgt
      301 gggtcaagtt tgccgaagcg attcgcaccg gctccaacat cgaggccgat ttcgatcatg
      361 cggtgcgccg ccaccgcatg ctggacacca tcgtgcgcgc ttcccagacc ggccaacggc
      421 agaaagttga gttacgatag cgcaaaattt gcgcggcctg tgcaaatgat ctggaaactg
      481 caagcactcg gagtcggaaa ttcctcgcgc aaggcgcaaa gacgctaagt tcggagttgt
      541 tgtcatttcg accacgggga gaaatctttc ttagatccgt cgcatccgct cgggctagtc
      601 tatcgacaga acttgattgc tcgaaggctt tagcgataaa tgctgtgtga gaggcaagcg
      661 caatgaacgc cgccaacggg caattgaaaa gataaaaaac catgacgatt acgagccatg
      721 acattaaggt gatgacctcg ggggctttta ccgcggcgta tcttgagctg attccccaac
      781 tcgaagcgtt gacgcagaaa aaaatcgtta ccgcggcaac ctccatcggc acgggggaga
      841 cctccatccc aagccggctt aagcgcggcg aggccgtcga cgttatcatc gtcgcggacg
      901 gcgtgctgac cggtttcatc aaggacggtt tggttttggc tgaaagctat acgccgctgg
      961 tacgctccgc catcggcatg gccgtgcgcg ccggagccgc ccagccggac atcggctccg
     1021 tcgacgcctt gaagcgcacg cttttgcagg caaagtctat cgcctattcg gccagcgtaa
     1081 gcggcgaata tttgaccaag gagctgtatc agcgcttggg catcgtcgac caagtgatgg
     1141 gtaagagccg gctcatcggc ggcggtgagc gcgtcggcgc cgtgatcgcg cgcggtgagg
     1201 cggacatcgg tttccagcag atgagtgagc tgatgccggt gcctggcata gcgcatgtga
     1261 cgccgctgcc ggcggaagtg cagaaggttt cggtgttctc cgccggtatc gctaaaagca
     1321 cgacggacgc ggccacggca cgggcggtga ttaaattcct cgcgtcgcct gaggcggcca
     1381 gcgccatcac aaagagcggc ttggagccga ttgaaaagcg gtgatgtcgc gccgcgatgg
     1441 ccggtgacgt gtcattgggc ttcgtttcgg ggcacgaacc agactctatt cgctttgcct
     1501 ggcgagtcgt taatgcgcgc tgctcgccgg cgcccggccg ctggccacgg cgacgatttc
     1561 acttaaactc ttgtctaaat ccagcgggcg gttttcccgc gcggcgtcgc gctcggcaac
     1621 cagggcatag acttcgaggc ggttgccttc gggatcgagg aaatagcagg agacggtgtt
     1681 ccccatttcc tcataggcat ggctgacgca gtggtcgatg ggcacgccat gggctatgaa
     1741 gcgttcgtaa aactctttga tctccgccgg cgtttcaact ttccaggcga tatgagcgat
     1801 cagcttggcg tcgccttcgc ggcccttgac cagagcgagt tggtggtcgt cgagttctgg
     1861 gtcgggagtt aggaacacca tgcggttggc attttcgcgg tatttaacca agcccaacat
     1921 gttggtgtag aagtcgacca tcttgtcgag gtctttaaca taaagcacga tatggctgat
     1981 gctggtaatc ttcggcatgg gaacctcctt ggtttacagt gcgattggtt ttgtcagtgc
     2041 tctggcttcg ctagcgacag tatccaaccc ggtccgccga tgtcaactta aactatcgct
     2101 taaactatcg ctaagcgcga cagccggacg gcatgtcatt agaatgcccc gataatctat
     2161 gacgaagctg cgatcgatat ttgcacctca atgcccatcc ggatctcaag aacgagatca
     2221 tccaggtagc gca
//
LOCUS       DATIRS010000650         1641 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_442371, whole genome shotgun sequence.
ACCESSION   DATIRS010000650 DATIRS010000000
VERSION     DATIRS010000650.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1641
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_442371"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..350
                     /locus_tag="VLM90_08215"
     CDS             <1..350
                     /locus_tag="VLM90_08215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12988.1"
                     /translation="VHTRLGGFGVSMDKIRKNPAQITRMVRASLKGVRFIRDHKPETL
                     AIMRDYLHVSADAAVKVHDFAMRSLNPDGLVAKNTMDTEIRLAREQLKLTEEISEDKI
                     MDWRFLKEVLAQK"
     gene            380..775
                     /locus_tag="VLM90_08220"
     CDS             380..775
                     /locus_tag="VLM90_08220"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSQ12989.1"
                     /translation="MARIKHIAIRTHDIEKTAAFYKEAFGLEQVGVGQSGIYLTDGYL
                     NIAILNMRGVVEGETMKVGVDHVGFQVDDVDATVEKIRALGGKPLNQRNEVNHGDPSK
                     PQSYFEVKCVVIDDQVIDVSNAGWVGASK"
     gene            890..>1641
                     /locus_tag="VLM90_08225"
     CDS             890..>1641
                     /locus_tag="VLM90_08225"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ12990.1"
                     /translation="MSISDISKRISGLYYGWRMIGVVSALRILGGGLHQYGFTVFFLP
                     VTQDLGLTRASTSLAFSLARAEGSLTAPIVGYLLDRYGPKPLMLAAALLAGIGYILFA
                     FVHSYTTFLIVYLGVISLAFNAGLVHAPTVVANSWFIKLRARAMTVVSAAVPVGGALI
                     TPLLAIAVQQFGWRWAALVAGGLFIAGGVPLSLAIRRSPESVGMAPDGGPLENPQGDN
                     NGAQSTNNAVNEPEITARQAFRSPIFWNLILS"
BASE COUNT          327 a          539 c          459 g          316 t
ORIGIN      
        1 tcgtgcacac gcggctcggc ggcttcggcg tttccatgga caagattcgc aagaacccgg
       61 cgcaaatcac ccgcatggtc cgcgcctcgc tcaaaggcgt gcgcttcatc cgcgaccata
      121 agccggagac tctggcgatc atgcgcgact atttgcacgt cagcgccgac gccgcggtga
      181 aggtccatga cttcgccatg cgctccctca accccgacgg cctggtcgcc aagaacacga
      241 tggacacgga aatccgtcta gccagggagc agctcaagct caccgaagaa atatctgaag
      301 acaaaatcat ggactggcgc tttctcaagg aagttttagc gcaaaaatag gctctcgccg
      361 cccagtggag gatcgacaca tggcaaggat caaacatatc gcgatcagaa cccacgacat
      421 cgaaaagacc gccgccttct acaaagaggc tttcggcctc gaacaggtcg gcgtcggtca
      481 gagcggcatc tatctcaccg acggctatct caacatcgcg atcctcaaca tgcgcggcgt
      541 ggtcgagggc gagaccatga aggtgggcgt cgaccatgtc ggctttcaag tggacgacgt
      601 cgacgccacc gtggaaaaaa ttcgcgccct cggcggcaaa ccgctcaacc aacgcaatga
      661 agtcaatcac ggcgatccgt ccaagccgca gtcctatttc gaagtcaagt gcgtcgtgat
      721 cgatgaccaa gtcatcgatg tttccaacgc cggctgggtc ggcgccagca agtaaaccgg
      781 ctccggccgg ttttggagat agccgaagtc ccgctagccg ttcgccactg gcagcgccga
      841 tagaatcgct gtatcacaga caccgaaggc atcgagcatt ggcgcgaccg tgagcatctc
      901 cgacatcagc aaacgcatct ccggtctcta ctacggctgg cgcatgatcg gcgtggtctc
      961 ggcgctgcgc atactcggcg gcgggctgca tcaatatggc ttcacggttt tcttcctgcc
     1021 ggtcacccaa gacctcggcc tgacccgcgc atcgacgtcg ctggcgttct ctttggcacg
     1081 cgccgaaggc tcgctcaccg cgcccatcgt cggctacctg ctcgaccgtt atggtccgaa
     1141 gccgctcatg ctcgccgccg cgctgctcgc cggtatcggc tacatcctct tcgccttcgt
     1201 gcatagttac acgacgtttt tgatcgttta tcttggcgtc atctcgctgg cgtttaacgc
     1261 cggccttgtc cacgcgccaa cagtcgtcgc caacagttgg ttcatcaagc tgcgcgcccg
     1321 cgccatgacc gtggtcagcg ctgccgtgcc ggtcggcggc gcgctgatca cgccgctgct
     1381 cgccatcgcc gtgcaacaat tcggttggcg ctgggccgcg ctggtcgccg gcggtttgtt
     1441 catcgccggt ggcgttccgt tgtcgctggc gattcgccgc tcgccggaaa gcgtcggcat
     1501 ggctcccgac ggcggaccat tggaaaaccc ccaaggcgac aataacggcg cgcagtcgac
     1561 aaacaacgct gtcaacgaac cggagatcac cgcgcgccaa gcctttcgct cgccgatctt
     1621 ctggaatctg attctatcca t
//
LOCUS       DATIRS010000651         1569 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1425640, whole genome shotgun sequence.
ACCESSION   DATIRS010000651 DATIRS010000000
VERSION     DATIRS010000651.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1569
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1425640"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..195)
                     /locus_tag="VLM90_08230"
     CDS             complement(<1..195)
                     /locus_tag="VLM90_08230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12991.1"
                     /translation="MKINILERIVMALAMTTLSLAGISIAADGQRERQEDEETRGQRE
                     KQQQPKQEQQQERAQKKSEQD"
     gene            complement(353..>1569)
                     /locus_tag="VLM90_08235"
     CDS             complement(353..>1569)
                     /locus_tag="VLM90_08235"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HSQ12992.1"
                     /translation="HRTMAGTIRRIAILGNHLPRQCGIATFTTDLSRAIAAEHAHADC
                     LVVAMNDAGQRYAYPPRVGFEVAENDIASYRGAADYLNAGKIDVVSVQHEYGIFGGKA
                     GDYLLTLLGKLRMPIVTTVHTILGEPDSLQRRALNEIARLSKRLIVMSAHGAALLHYV
                     HGVPENKIDIIPHGIPGVPFVSHNKKQLGIDGKSVIFTFGLLSPDKGIEHVIDALPAI
                     LARHPDTVYVVLGATHPHIKERDGESYRESLERRAQELRVESSVIFHNRFVSGGELVK
                     FLAAADIYVTPYLNPHQSTSGTLAYAVGAGKAVISTPYLYARELLADGRGILVPWRDS
                     QTIARAVVDLLSDDAKRLALCARAAAHGRSMVWPAVAHRYLQSFAQACSREQSVPRVS
                     REIPLQARPVST"
BASE COUNT          293 a          446 c          475 g          355 t
ORIGIN      
        1 gtcctgttct gatttttttt gagcccgttc ttgctgctgc tcttgttttg gctgttgttg
       61 cttttcacgc tgaccgcgcg tttcctcatc ctcctgccgt tcgcgctgcc catcggccgc
      121 tatgctgatc cccgccaatg acagggtggt catggcaagc gccatcacta tccgctctaa
      181 gatattaatt ttcatggtac tcttcctgga cactggggca cgtaaatttg cgataaagcg
      241 caatcatgat cattttctag gagtcgctaa accgcgatgc ccttttctta atgagataaa
      301 tggttctcta agctctgtct cctgtttgaa tcctcgcgcc tcgccacatt tcttaagttg
      361 agacagggcg agcttgtaag ggtatttctc ggctaacccg cggcactgat tgctctcgac
      421 tgcatgcctg cgcgaagctc tgcaggtagc ggtgcgcgac cgcgggccag accatactgc
      481 ggccgtgagc ggcagcgcgt gcgcagaggg ccaatcgttt ggcatcatcg ctcaggagat
      541 ccaccaccgc gcgcgcgatc gtctgcgagt ctctccaggg cacgagtatg ccgcgcccgt
      601 cagcgaggag ttcgcgcgca taaagataag gcgtagagat gacggctttg ccggcgccca
      661 ccgcataggc caacgtcccg gacgtgcttt ggtgcgggtt gaggtacggc gttacataga
      721 tgtccgcggc ggcgagaaac ttgacgagtt cgccgccgct cacgaaacga ttgtgaaaga
      781 tcacgctgga ttcgacgcgg agttcttgcg cgcggcgttc caggctctcg cggtagctct
      841 caccgtcgcg ctctttgata tggggatggg tagcgccgag cacgacgtat accgtgtccg
      901 ggtggcgcgc aagaatcgcc ggcagcgcgt cgatgacatg ctcgatgcct ttgtccggcg
      961 atagcagtcc gaaggtaaaa atcaccgact tgccgtcgat gccgagttgc ttcttgttgt
     1021 gtgaaacgaa cggtacgccc ggaatcccgt gcgggatgat atcgattttg ttctcgggca
     1081 cgccgtgaac ataatggagg agagcggcgc cgtgggcgct catgacgatg agccgtttgg
     1141 aaagccgggc gatctcattc agcgctcgac gctgcaggga atccggctcg ccgaggatgg
     1201 tgtgcaccgt ggtcacgatc ggcatgcgca atttgcccaa gagcgtgagc aggtaatcgc
     1261 cggccttgcc gccgaagatg ccgtactcgt gctgcacgga cacgacatcg atcttgccag
     1321 cgttcaaata atccgccgcg ccgcgatacg aggcgatatc gttctcggcc acctcgaaac
     1381 cgacccgcgg cggatacgcg taacgttggc cggcgtcgtt cattgcgact acgaggcaat
     1441 cggcatgcgc atgctccgcg gcgatcgctc gactgagatc ggtggtgaaa gtagcgatgc
     1501 cgcactggcg cggcaagtga ttgccgagga tcgcgatgcg acgaattgtt ccagccatgg
     1561 ttcggtgat
//
LOCUS       DATIRS010000652         1692 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1425807, whole genome shotgun sequence.
ACCESSION   DATIRS010000652 DATIRS010000000
VERSION     DATIRS010000652.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1692
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1425807"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1692
                     /locus_tag="VLM90_08240"
     CDS             <1..>1692
                     /locus_tag="VLM90_08240"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HSQ12993.1"
                     /translation="GAPFLHAKKGQSYFGPAYFVRGSEPYMTIAVPIERFAGDVIGVL
                     QAEVNLKYIGDVVTNLKIGKAGYSYVISRGGELIAHPDISLVLQRRNVLKLESTRAAF
                     MPAAERPKRQALVTPNVQGKNVLTASAQVTGLEWAVIVDRPVEEAYEPLYASVMRTST
                     VLLFGLGLALMASLFIGRRVVRPVGILREGVERIGAGDLGHRLTLKTGDEIEVLADEF
                     NKMTAQLQESYTNLEQKVEDRTKELTESLAQQTATSEILGVIASSPSDLQPVYQTILG
                     NINRLCEANIAALFLYNGETLALANSQGTTSEFADHLHSSRPRPSHATTTRLAALEHR
                     VVHVTDLLNDPAFAPSPREIYEKENIRTVISMPLMRENTLVGVITTWRREARPFTDKQ
                     IALLKTFADQAVIAIENVRLFRELGEKNALLEAASKHKSQFLANVSHELRTPLNSIIG
                     FTRIVLRRTEGKIDQLQKENLQKVLVSSEHLLSLINELLDLAKIEAGRMDVYSEPFKL
                     EEVLRIATATVEPMLRNSNVTLVTEMPPDLPTLKSDRDKLKLIVLSVGRSGGISVT"
BASE COUNT          371 a          551 c          470 g          300 t
ORIGIN      
        1 cggggcgccg tttctccacg ccaagaaggg gcaatcttac ttcggcccgg cctacttcgt
       61 gcgcggctcc gaaccctaca tgaccatcgc cgtgccgatc gagcgcttcg ccggcgacgt
      121 catcggcgtg ctccaggccg aggtcaatct caaatacatc ggcgacgtgg tgacgaatct
      181 aaaaatcggc aaagccggct actcctacgt catcagccgc ggcggcgagc tcatcgccca
      241 tcccgatatc agtttggtct tgcagcggcg caacgtgttg aaattggaat cgaccagagc
      301 cgctttcatg ccggccgccg aacggccgaa gcgccaagcg ctggtcaccc ccaacgtcca
      361 aggtaaaaat gtcttgaccg catcggcgca ggtcaccggg ctcgaatggg cggtcatcgt
      421 cgaccgcccg gtggaagaag cctacgaacc gctctacgcg tcggtcatgc gtacctccac
      481 ggtgctgctg ttcggactcg gtctggcgct catggcgagt ctattcatcg gccgccgggt
      541 ggtccggccg gtgggcatcc tgcgcgaggg cgtcgagcgc ataggcgccg gcgatttggg
      601 tcatcgatta acgctcaaaa ccggcgacga gatcgaagtc ctggccgacg agttcaataa
      661 aatgaccgcg cagctccagg agtcgtatac caacttggaa caaaaggtcg aagaccgcac
      721 caaggaattg actgaatcgc tggcgcagca aaccgcgacc agcgagatct tgggcgtcat
      781 cgccagctcg ccgagcgatt tgcagccggt ctaccaaacc attctcggta atatcaatcg
      841 cttgtgcgaa gccaacatcg cggcgttgtt tctctacaat ggcgaaactc tcgctctcgc
      901 caacagccag ggcaccacca gcgagttcgc cgaccacctg cacagcagcc ggccgcgccc
      961 gagccacgcc acgaccacgc gactggccgc gctggagcat cgcgtggtgc acgtcaccga
     1021 tctgctcaac gatcccgcct tcgcgcccag cccccgagaa atttacgaaa aagaaaatat
     1081 ccgcaccgtc atctccatgc cgctgatgcg tgaaaacacc ctggtcggcg tgatcactac
     1141 ctggcggcgc gaggcccggc cgtttaccga caagcagatc gctctgctca aaaccttcgc
     1201 cgaccaggcc gtgatcgcga ttgagaatgt ccgcctattc cgcgagctgg gcgagaagaa
     1261 cgccctgctc gaagccgcca gtaaacataa atcgcagttc ctcgccaacg tcagccacga
     1321 gctacgcacg ccattgaatt cgatcattgg tttcacccgt attgtgctgc gccgcaccga
     1381 gggcaagatc gaccaattgc aaaaagaaaa cttgcagaaa gtgttggtca gctccgagca
     1441 cctgcttagt ctgatcaacg agctgctcga tctcgccaag atcgaagccg ggcgcatgga
     1501 tgtgtactcg gagcccttca agctcgaaga agtgctgcgc atcgccaccg ccaccgtcga
     1561 gcccatgctc agaaacagca acgtcacgct ggtcaccgaa atgccgcccg acctgccgac
     1621 gctcaaatcc gaccgcgaca agctgaagct gatcgttttg agcgtcggca ggtcgggcgg
     1681 catttcggtg ac
//
LOCUS       DATIRS010000653         4164 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_48337, whole genome shotgun sequence.
ACCESSION   DATIRS010000653 DATIRS010000000
VERSION     DATIRS010000653.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4164
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48337"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..542
                     /locus_tag="VLM90_08245"
     CDS             <1..542
                     /locus_tag="VLM90_08245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12994.1"
                     /translation="SILNIGDQTVLVQAMESGTIDATALDGVFSRRLKQKGFTVLAEL
                     AETKIPYVSNVIVGTRGFFQQQPEAAENLLKGLVESLAFILAPANKAVVVGTIMKRLK
                     IADAVVAEQGYRDLVQIIDQKPYVSLDGIKNIQRLMKIQNPVIGTVKVEDLIDNRPLR
                     KLEDSGFLQRTYAAYGINK"
     gene            720..2312
                     /locus_tag="VLM90_08250"
     CDS             720..2312
                     /locus_tag="VLM90_08250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12995.1"
                     /translation="MAKLRKQRRSARQAHSVRAVRAPWLPALSARSQALIFALIALIV
                     SALLHFSSDKFADPDGFYHFRHAALYGEGNIFSPAFPWIPFSVIGKYSADIWYGFHVL
                     LIPFTWIGDPVLAMRLAGVGLTWAFLLMIYCACVKLELKPAWLWPFALLVSSAFLLHR
                     VTMLRPQVLSLGLTVLLLAQIVLGKLRGVFVITFAIAWVHLSLFFAPLILLGLFPAIK
                     FFTDRELRWREFVAGCAGLVAGWLLRPNPLGAASIAYVQVVDLTLANVAHAPLEFGAE
                     LRPLVLAYSSNYLPFILLWLASLLFLLWRAIANRSQVALSIKTALVLSATLSSVFFLV
                     AILFARRGFDFCSAFGVLVLALAVGEIMPGKKWPRLAVVGLFCVLAVYSVTQRHRVVA
                     LGWDVNQVEPAARWLNANSNAGDIVFNFRWFYFPELFFWNTKNVYTSRMDPIFQYAFD
                     SQLYLSGLKIAAHRPSLFCPTGACADPAGVDAFKLLKERYRARYIYLLKEFDANAYFH
                     FLSDSRFELRYEDRGAAVFEAL"
     gene            complement(2321..3289)
                     /locus_tag="VLM90_08255"
     CDS             complement(2321..3289)
                     /locus_tag="VLM90_08255"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ12996.1"
                     /translation="MLLLTKPMLSLVLFGLLHFFSGGVGAEPIRIAMPSKSLTFLNFY
                     LAEKFGLFKNEGLEASFPVGKADVQLTAVITGEMDYIAAAGTSLRGAATGLPVKALMF
                     ALDKPLFFMMVKPETKRIQDLKGKAVAVTAVAATDALGARAMAKAAGMNPDQDLVFLS
                     AGNTANALAAVQAGSAAAAMLSIPFNLKAEELGHRSLGNAADYLRTVLSGLATSDARI
                     KANPAQVKRTIRAALRGMDFARDPANQEKIIPYIMEDFQLDRKTAEASLREIVKHYSK
                     DGTTSEDAVRTDIEFVREQNKLKTAIPTAQGLDYSLLKEVLAELKK"
     gene            complement(3370..>4164)
                     /locus_tag="VLM90_08260"
     CDS             complement(3370..>4164)
                     /locus_tag="VLM90_08260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ12997.1"
                     /translation="NKSACPNFDRSKSFHDFGETAPRFLTLDKLSRAVTALDRTLSHL
                     AVVFADDDTEMKQLCQGHLVHSGLLIRGLVGESEAIKTLYPFHAMAIPNQPELSDRLI
                     AKVRAAYEDGSLAHTCAARYAMRADDLGKGIVKAISIQKQLLQLVPIEVHRLADAIET
                     RVRLRKIAESLTSPNHRQQAFTIEAAIRAHAMRQQQLGKTLKADFRIDPSRLFFLDNF
                     LIDRIKAHFGNELEFMRTVLAPYFERNQAAKQTQSATANSGIAINS"
BASE COUNT          750 a         1149 c         1252 g         1013 t
ORIGIN      
        1 tcagcattct aaacatcggc gatcagacgg tgctggtgca ggcgatggaa agcggtacca
       61 tcgatgcgac cgccctcgac ggcgtgttca gccgccgctt gaaacaaaag ggttttacgg
      121 ttctcgccga gctggccgaa accaagattc cctatgtcag caacgtcatc gtcggtaccc
      181 gcggtttctt tcaacaacag ccggaggcgg cggagaatct gctcaaagga ttggtcgaaa
      241 gtctggcgtt cattctggcg ccggcgaaca aagcggtggt ggtcggaacg atcatgaaac
      301 ggctaaagat cgccgacgcc gtcgtcgccg agcagggtta tcgcgatttg gtgcagatca
      361 tcgaccaaaa accctatgtc tcgttggacg gcataaaaaa tatccagcgc ttgatgaaaa
      421 ttcaaaaccc ggtcatcggc actgtcaaag tcgaggatct catcgacaac cggccgctca
      481 gaaaactcga agacagcggc ttcttgcagc gaacctacgc ggcctacggc atcaataaat
      541 aactctccgc acggcaactg acctggcgaa tgccgaccag cgggaacgcg ctggcgccgg
      601 tgcgcagagg acagacacag gggtctgccc tacatggtcg aaccgctggt gaatcgcagt
      661 cgctacgccc tttgctttga ttgatcgtac gatctcggtt acggttggcg gcaaccgtaa
      721 tggcgaaatt gcgaaaacag cggcgcagcg ctcggcaagc gcatagcgtt agagcggtga
      781 gagctccttg gctgcctgcg ctcagcgcgc gcagtcaagc gctgatcttt gcgctcatcg
      841 cattaatcgt ttcggcgctg ttgcatttta gctcggacaa gtttgctgac cccgacggct
      901 tttatcattt ccgccacgcg gcgctctatg gcgagggaaa tatattttcg ccggcgtttc
      961 cgtggattcc cttttcggtc atcggtaaat actcggcgga tatttggtac ggctttcatg
     1021 tcctcttgat accgtttacc tggatcggcg atccggtgtt ggccatgcgt ctggccgggg
     1081 tgggactgac ctgggcgttt ctcctgatga tctattgcgc gtgcgtaaag ctcgagctca
     1141 agccggcatg gctctggcca ttcgcactgc tggtatcctc ggcatttctg ctgcaccgcg
     1201 tcacgatgct gcggccgcaa gtgctctcgc tcggattgac cgtgctgtta ctggcgcaga
     1261 tcgtgctcgg caagcttcgc ggcgtgtttg tcatcacctt tgccattgcc tgggtccatt
     1321 tgagtctttt cttcgcgccg ctgatcttgc tcggtttatt cccggcgatt aagttcttca
     1381 cggataggga actgcgctgg cgagaattcg ttgcgggctg cgcggggctc gtcgccggct
     1441 ggctgctgcg gcctaatccg ttgggcgcgg catcgatcgc ttatgttcaa gttgtcgacc
     1501 ttacgcttgc gaacgtcgct catgcgccgc tcgaattcgg cgccgagctg cgcccgttgg
     1561 tgctcgctta ctccagcaac tatctgccgt ttatcctgct gtggttggca agtctgctgt
     1621 ttctcttgtg gcgcgccatc gccaatcgat cccaggtcgc cttgtcaata aaaaccgcgc
     1681 tggtcttgag cgcgacgctg tcatcggttt tcttcctggt tgcgatcctg tttgcccgcc
     1741 gcggtttcga tttttgttcg gctttcggcg tgctggtgtt ggcactggcg gtcggcgaga
     1801 tcatgcctgg caaaaaatgg ccgcgcctcg ccgtcgttgg cttgttctgc gtgctggcgg
     1861 tttacagcgt gacgcagcgc catcgcgtgg tcgcgctcgg ctgggatgtc aatcaagttg
     1921 agccggcggc gcgctggctc aatgccaact ccaacgccgg cgatatcgtg tttaattttc
     1981 gctggttcta tttcccggag ctgttttttt ggaataccaa gaatgtatac accagccgca
     2041 tggacccgat cttccagtac gctttcgatt cgcagttgta tttgtccggt ttgaaaatcg
     2101 cggcgcaccg gccatcgctc ttctgtccca ccggcgcctg tgccgatccg gcaggcgtgg
     2161 atgcgtttaa gttgctcaag gagcgctatc gcgcgcgcta tatttatttg ctcaaggagt
     2221 tcgatgctaa cgcctatttt catttcctga gcgactcgcg attcgagctg cgctatgagg
     2281 atcgtggcgc cgcagtgttc gaagcgctgt gagcttcagt tcactttttc agctccgcca
     2341 acacttcttt tagcaaactg tagtccaatc cttgggcggt gggtatcgcg gtcttgagtt
     2401 tgttctgctc ccggacgaac tcgatatcgg tgcgcacggc gtcttcgctg gtggtgccgt
     2461 ccttggagta gtgcttgacg atctcgcgca acgacgcctc ggcggtctta cggtcgagct
     2521 gaaagtcttc catgatgtag ggaatgattt tctcctggtt cgccggatcg cgggcgaagt
     2581 ccatgccgcg cagcgccgcg cggatggtgc gtttgacctg cgccggattg gccttgatgc
     2641 gcgcgtcgga ggtcgccagg ccggacaaca ccgtgcgcag gtaatcggcg gcgttgccga
     2701 ggctgcggtg gcccagttct tcggctttca agttgaaggg aatcgacagc atcgccgccg
     2761 ccgccgaacc ggcctgcacc gccgcgaggg cgttggcggt gttgccggcg cttagaaaaa
     2821 ccaaatcttg atcgggattc atgccggcgg ccttggccat ggcgcgcgcg ccgagggcgt
     2881 cggtggcggc cacggcggtg acggcgacgg ctttgccttt gagatcctgg atgcgtttgg
     2941 tttcgggctt gaccatcatg aagaacagcg gtttgtcgag agcgaacatc agcgccttca
     3001 ccggcaggcc ggtggccgcg ccgcgcagcg atgtgcccgc ggcggcgata taatccatct
     3061 cgccggtgat caccgcggtg agttgcacgt cggctttgcc gaccggaaaa ctcgcttcaa
     3121 gcccttcgtt tttgaacagg ccaaattttt cggccaagta gaagttcaaa aaggtcaagc
     3181 tcttggacgg catggcgatg cgtatcggtt cggcgccgac accaccgctg aagaagtgta
     3241 ggagtccaaa gagcaccaac gataacatcg gttttgtcag cagcaacatg gcttcgcctt
     3301 tcgctgtttt tcaatcacca tcggagcgcg gtaagaatct gactccgtgt tggcggtttg
     3361 tgagcagggt cagctattga tcgctatacc actgtttgcc gttgccgact gggtttgttt
     3421 ggcagcctgg ttgcgctcaa agtagggagc taagaccgtg cgcatgaatt ccagctcgtt
     3481 gccgaagtgc gctttaattc tgtcgatcag aaaattgtcg aggaaaaaca gtctggaagg
     3541 atcgatgcga aagtcggcct ttaaagtctt gccgagctgc tgctgtctca tggcatgagc
     3601 gcgtatggcc gcctcgatcg tgaacgcctg ttgccgatgg ttgggcgacg ttaagctctc
     3661 ggcgattttg cgcaggcgaa cgcgggtttc aatggcgtca gccaggcgat gcacttcgat
     3721 cggcaccaat tgcaatagtt gtttttggat cgatatcgcc tttacgatgc ccttgccgag
     3781 atcatcggcg cgcatcgcgt aacgtgccgc gcaggtgtgc gcgagcgaac cgtcctcgta
     3841 ggcggcgcga actttagcaa tgagtctatc gctgagttcg ggttggttag gaatcgccat
     3901 cgcgtgaaac gggtagagcg tcttgatcgc ctcgctttcg ccgaccagcc ctctgatcaa
     3961 tagcccggag tggacgaggt gtccttgaca taactgtttc atctcggtgt cgtcgtcggc
     4021 gaacaccacc gccaggtggg acagcgttct gtccaatgcg gtgacggcgc gcgagagctt
     4081 gtcgagggtc aagaatcggg gagcggtctc gccgaaatcg tgaaagcttt tcgatcgatc
     4141 gaaattcgga caggcgctct tgtt
//
LOCUS       DATIRS010000654         3990 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_835909, whole genome shotgun sequence.
ACCESSION   DATIRS010000654 DATIRS010000000
VERSION     DATIRS010000654.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3990)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3990)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3990
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_835909"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..822
                     /locus_tag="VLM90_08265"
     CDS             <1..822
                     /locus_tag="VLM90_08265"
                     /inference="COORDINATES: protein motif:HMM:NF013559.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M12 family metallopeptidase"
                     /protein_id="HSQ12998.1"
                     /translation="GAVANLKFDFNNAANADIRIAFDPDDGAWSYLGTDCKSIPVNQP
                     TMNLGFLDGGTAAHEFGHAIGLAHEHQNPSGGIEWNEAVVISELAKSPNFWDEQTARH
                     NVIRKYTANQINGTEFDPDSIMLYFFPSSWTLNGIATKANDVLSKIDKQFIAGAKMYP
                     KTGGTTSTAVELEVNAARRTAAAIGKVGEEDLYRFTAPRDGRYLIDTRGPTDVVMKLF
                     GPNSETALIAEDDDSGIDTNALIVIDLLAGNYFVQVRHYNRANGMGNYTIKVRRL"
     gene            1009..2448
                     /locus_tag="VLM90_08270"
     CDS             1009..2448
                     /locus_tag="VLM90_08270"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HSQ12999.1"
                     /translation="MSADRNPFASIPTGSSSTAAAAEFIEQITFDAIPADAVRIGTRC
                     LLDGLGLFVAGSEERAVQLLVEEAEQSGGRADALLLSRGSVKVPAPMAARVLGTAGHA
                     HDWDDSQVSVDPAHVYGLLTHPTIPPLASALVMTQKFGAIDGKTFMLAFLTGFEVECK
                     ISEWMLPQHYLRGFHSSVTVGTFGAFAAAAKLLRLQGDRLRSGFGIAASFAAGIRCNF
                     GTMTKPLHVGRAAENGVTAALLAARGFTADPDALDGPWGYFAVQGGGLSAEKISQGFG
                     KTWTIVEPGVSIKPYPCGVLTHPSIDLMLKLVSDNNVKPNDIETVKVYAGSNILNPIC
                     YPIAANHLQAKFSLPAALAMIALARKAGKTEFSYAFVAAAPMQAMQRRITTELDPAIE
                     KMGFDKMRSRIAIKLKNGKMIEGWADERYRGGPDNPLNDAELEAKVRSCCENVIDASS
                     QAKLIDAACSVSKLLDARRLMMLLNSIDD"
     gene            2506..3633
                     /locus_tag="VLM90_08275"
     CDS             2506..3633
                     /locus_tag="VLM90_08275"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HSQ13000.1"
                     /translation="MKISDIEIIELQNIPVTPPLFKQPLRTGVRLLKLKTDDGRVGLS
                     QIGGFLHAATVAAIKHELLPFLKDKDPLENERLMHQMLWKFNTRAHGGVWNYAVSAVD
                     VALWDIKGRFYNTPVWRLLGGAQKAIPAYITFGLRAYSRDELAAAAKHWVASGQSRLK
                     VQVGRVNIRGESDPGGASAEHRSDNPAEDVARMRAVRDAVGDDVELMADANCLMKLDT
                     AVRWCKAFEPLNLIWFEEPIVHNDPHLLAQLRKQTHIPIAAGQWENFSRLADLVRADA
                     VDFLNIHVLSVGGFTMGMKAAGLAQAFNLPIGNGDHFDFHLHAAVPNGWRAEIHVNNW
                     LTTNAIYKELPTLADGWVTLSERPGLGVELNEDAVKEYRAK"
     gene            3734..>3990
                     /locus_tag="VLM90_08280"
     CDS             3734..>3990
                     /locus_tag="VLM90_08280"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSQ13001.1"
                     /translation="MGGVIIGVMTVVAVVSFIQGLNNYVATKLFSLSPDVYTIERFGI
                     ITTRDGFLEALKRKRVQKSDFEMDQRLSKTAVMVGARSGTTR"
BASE COUNT          881 a         1240 c         1127 g          742 t
ORIGIN      
        1 ggcgctgtcg ccaatctcaa gttcgatttc aacaacgccg ccaacgcgga tatccgcatc
       61 gccttcgatc ccgacgacgg cgcctggtcc tacctgggaa cggactgcaa aagcattccg
      121 gtcaaccaac cgaccatgaa cctgggcttt ctcgacggcg gcaccgcggc tcatgaattc
      181 ggccacgcca tcggcctggc ccacgaacat caaaatccga gcggcggtat tgaatggaat
      241 gaggcggtag tgatcagcga gctagccaag tcgcccaact tctgggacga gcagaccgcg
      301 cggcacaacg tcattcgtaa gtacaccgcc aaccaaatca acggcacgga attcgatccc
      361 gactcgatca tgctgtactt cttcccctcg tcttggacgc tcaacgggat cgccaccaaa
      421 gccaacgacg tgctttcgaa aatcgataag cagttcatcg ccggcgccaa gatgtatccc
      481 aagaccggcg gcacgacatc gacagcggtg gagttggaag tgaacgccgc gcgccgcacc
      541 gcggctgcca ttggcaaagt cggcgaagag gacctgtacc gtttcaccgc gccacgggac
      601 ggccgctatt tgatcgatac tcgcggtccc accgatgtcg tcatgaaact cttcggcccc
      661 aacagcgaaa ccgctctgat tgccgaggat gacgactcgg gcatcgacac caatgcgctg
      721 atcgttatag atttgctggc cggcaactat ttcgtccagg tgcgccacta caaccgcgcc
      781 aacggcatgg gcaattacac gatcaaagtg cggcggttat aaataggaca gctgcgtttg
      841 ccagtatatt ttgactcgct ttcgcaacct tgccggtaat gctcgttaat cagcattgcc
      901 ggcaaggaat atctcgcgcc gttccgctca tcacatcttg cttgcgcgcc aatgcccgcg
      961 taatgtgcca gccatcttcg caaaaagcac cattcacggg agcatgaaat gagcgccgat
     1021 cgcaatccct tcgcatcgat tcccacgggc agcagttcca ccgctgccgc cgccgaattt
     1081 atcgagcaga ttaccttcga cgcgattccc gccgacgcgg tgcgcatcgg cacgcgctgt
     1141 ttgctcgacg gcttgggcct gttcgttgcc gggtcagaag aacgcgcagt tcaactgctg
     1201 gtagaggaag cggaacaatc cggcgggcgg gcagatgcgc tgttgctcag ccgtggcagc
     1261 gtaaaagtac ccgcgcccat ggccgcgcgc gtgctcggca ccgccggcca tgcgcacgat
     1321 tgggacgaca gccaagtcag cgtcgatccc gcccatgtct atggtctttt aacgcatccg
     1381 accattccgc cgctagcgag cgcgctggtg atgacgcaga aattcggcgc catcgatggc
     1441 aagactttca tgctcgcctt cctcaccggt ttcgaagtcg agtgcaagat atccgaatgg
     1501 atgctgccgc agcattattt gcgcggcttt cactcaagcg tcaccgttgg gacattcggc
     1561 gcttttgccg cggcggcgaa acttttgcga ttgcaaggtg accgactgcg cagtggcttc
     1621 ggcatagccg ccagctttgc cgccggcatc cgctgcaact tcggcaccat gaccaagccg
     1681 ctccatgtcg gccgagccgc ggagaatggc gtgaccgcgg cgctgctcgc ggcgcgcggc
     1741 ttcactgccg accccgatgc gctcgacggc ccctggggtt acttcgccgt ccaaggcggc
     1801 ggcctcagcg ccgagaaaat ctcacaaggc ttcggcaaaa cctggaccat cgtcgaaccc
     1861 ggtgtatcga ttaaacctta cccctgcggc gtgctcaccc acccgagcat cgatctgatg
     1921 ttgaagctgg tcagcgataa caacgtaaag ccgaacgata tagaaacggt aaaagtctac
     1981 gccggttcga atatcttgaa tcccatctgc taccccatcg cggccaatca tctgcaagcg
     2041 aagttctcgt tgccagcagc attagctatg atcgcgctgg cccgcaaagc cggcaagacc
     2101 gaattctcct acgcattcgt cgccgccgcc cccatgcaag ccatgcaaag gcgcatcacc
     2161 accgaactcg accccgccat cgaaaaaatg ggcttcgaca aaatgcgctc gcgcatcgct
     2221 atcaaattga aaaacggcaa aatgatcgaa ggctgggccg acgaacgcta tcgcgggggc
     2281 ccggacaatc cgctgaacga cgcagagctg gaagcgaagg tacgatcctg ctgcgagaac
     2341 gtcatcgacg caagcagcca ggcaaaattg atcgacgcgg catgctccgt cagcaaactg
     2401 ctggacgccc gtcgactcat gatgctacta aatagtatcg acgattagtg tgatgtgagt
     2461 gtctagcatg gcaacgagta tcccagattc acaaggagat tgctgatgaa aatttccgac
     2521 atcgaaatca tcgagctgca aaacattccc gtcaccccgc cgctgttcaa acagccgctg
     2581 cgcaccgggg tgcggctttt gaaactcaag accgacgacg ggcgtgtcgg cttgtcgcag
     2641 atcggcggct tcttgcacgc cgcaacggtc gctgcgatca agcacgaact gctgccgttc
     2701 ttgaaagaca aggacccgtt ggaaaacgag cgcttgatgc atcagatgct gtggaagttc
     2761 aacacccgtg cccatggcgg cgtgtggaat tatgccgtca gcgccgtcga cgtggcgttg
     2821 tgggacataa agggcaggtt ttataacacg ccggtgtggc ggctgctcgg cggcgcacaa
     2881 aaagcgatcc cggcttacat cactttcggt ctgcgcgcct acagtcgcga cgaattggcg
     2941 gccgcggcca aacactgggt ggcgagcggc cagagccggc ttaaggttca agtcggccgc
     3001 gtcaacatcc gcggcgaaag cgacccgggc ggcgccagcg ccgagcaccg cagcgacaat
     3061 ccggccgaag atgtcgcgcg catgagagcc gtgcgcgacg cggtgggcga cgatgtcgaa
     3121 ttgatggccg atgccaattg tttgatgaag ctcgacacgg cggtgcgctg gtgcaaagca
     3181 ttcgagccgc ttaacttgat ctggttcgaa gagccgatcg ttcataatga tcctcacttg
     3241 ctcgcccaac tgcgaaagca gacccatatc ccgattgccg ccggacagtg ggaaaacttc
     3301 tcgcgcctcg ccgacctggt gcgcgccgac gccgtcgatt ttctcaacat ccacgtgctc
     3361 tcggtcggcg gtttcactat gggcatgaaa gccgcgggcc tggctcaagc attcaacttg
     3421 ccgatcggca acggcgacca cttcgacttt cacctccacg ccgccgtgcc caacggctgg
     3481 cgcgccgaga ttcacgtcaa taactggctg acgacaaacg ccatctacaa agaattaccc
     3541 actctcgccg acgggtgggt gacgctcagc gaaagacccg gacttggagt cgaactcaat
     3601 gaggatgcgg tgaaagagta tcgcgccaaa tgaagatccc cgccgcaagc agcggataac
     3661 acagcaaacc cacttcggat gaagttgtag ggtgggtgga ggcgcaacgc gccgataccc
     3721 accgttcgga atgatggggg gggtcatcat cggggtcatg accgtcgtcg ccgtggtgtc
     3781 gttcatccag ggcctcaaca actacgtcgc cacgaagctc ttctctctct cccccgacgt
     3841 ctacacgatc gagcggttcg gcatcatcac gacccgggac gggttcctcg aggctctgaa
     3901 gcggaagcgg gtccagaaga gcgacttcga gatggaccag cgcctctcga agaccgcggt
     3961 catggtcggc gcccgatcgg gaacgacccg
//
LOCUS       DATIRS010000655         2116 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_836015, whole genome shotgun sequence.
ACCESSION   DATIRS010000655 DATIRS010000000
VERSION     DATIRS010000655.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2116
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_836015"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..954
                     /locus_tag="VLM90_08285"
     CDS             <1..954
                     /locus_tag="VLM90_08285"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13002.1"
                     /translation="PAPGTLPPPGHIFHKNQKLFKPHKERGWSPQVQLDAMAEEGIDV
                     AILYPSRGLNLLSVPDLEPEFAAALARAYNDWLHDFCQADPGRIIGAGMISPFDIDRA
                     VQEAERCVKQLGFRAIFLRANIVNGHNWHEPYYEPLWSALEELCVPLGFHEANNSLAR
                     QSGDNFGYDFMLRHTYAHPVEQMLAVGAFCGGGILARHPKLKVAFLEGNCGWLPFLLW
                     RLDEHWEQYGDQWAPGLQQPPSFYFKRQCYASVECDEEPVKYTIDYLGNERLVFSTDF
                     PHVDTKYPRAVERFLELSIGHEDKRKILWDNCATYYGMMGM"
     gene            1073..2029
                     /locus_tag="VLM90_08290"
     CDS             1073..2029
                     /locus_tag="VLM90_08290"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13003.1"
                     /translation="MVQASRLLLLVIVIIGSAIISEQTIAADPSNKVRIGYPSSAVST
                     LPFDIAKEKGFYSKAGLDVEYIQMRSALGPQAILNGNIQFFTSPQSAINAAVAGLPLV
                     VVLSLYRDTPWVLVTNKDINRPHDLSGKRLAISDIRSSPYYFARAGLRKLGLEEKQVN
                     LVTTGGTSNSFATLTTNQVAGAVLSPPFDEKAVSLGYKKFLFLGDLADIPYVGLFTSQ
                     AEIRANRERIRRTIAAVMNAIEWQKSNRSEAVKMIAARYQISSGEAERSYDTMVAILS
                     PDGAINMKKIRGYLNLLREERPVADDLEPEKLVDFSMLPGAR"
BASE COUNT          473 a          662 c          553 g          428 t
ORIGIN      
        1 ccagcgccgg gaactctgcc gccgccaggc catatttttc acaagaatca gaaactgttt
       61 aagccgcaca aagaacgggg ctggtcgccg caggttcagc tcgacgccat ggccgaggaa
      121 ggcattgatg tggcgattct ctatcccagc cgcggcttga atcttctcag cgtgcccgac
      181 ctggaacctg aattcgccgc ggcgcttgcc cgcgcctata acgactggct tcatgatttc
      241 tgccaagccg atcccggcag aataatcggc gccggcatga tctcgccatt cgatatcgac
      301 cgggccgtcc aggaagccga gcgctgcgtc aaacagctgg gctttcgcgc gatatttctg
      361 cgcgccaata tcgtcaacgg ccacaactgg catgagccct actacgaacc gctctggtcg
      421 gcattagaag agctgtgcgt accactgggc tttcacgaag ccaataactc gttggcgcgc
      481 cagtcaggcg acaatttcgg ctacgatttc atgctgcgcc acacctatgc tcatccggtc
      541 gaacagatgc tcgccgtcgg cgctttttgc ggcggcggca ttttggctcg ccacccgaaa
      601 ttgaaagtcg cttttctcga aggcaactgc ggctggctgc cgtttctact ctggcgcttg
      661 gacgaacatt gggagcagta tggcgatcaa tgggcgccgg ggttgcagca gccgccaagc
      721 ttttatttca agcgccaatg ctacgcctcg gtggagtgcg acgaggagcc ggtgaaatac
      781 accatcgact atctcggcaa tgagcggctg gtcttctcca ccgacttccc ccatgtcgac
      841 accaagtatc cccgcgccgt cgagcgtttt ctcgaactgt ccatcggaca tgaagacaaa
      901 cgcaagatcc tctgggacaa ctgcgcgacc tactacggca tgatgggaat gtagaaggaa
      961 catggtcaaa ttagtcagaa cattttacgc atccgatttt tgtaggggca ggcccccgtg
     1021 cctgccctcc ggacgggcaa ccacaggggg ttgcccctac atcggaacgc agatggtaca
     1081 ggctagccgc ttattactgc tggtgatcgt aataattggc agcgcaatta tttccgaaca
     1141 aaccatcgca gctgacccct cgaataaggt gcgcatcggc tatccctcct cagcggtttc
     1201 gaccctgcca ttcgacatcg ccaaagaaaa aggcttttac agcaaagccg gcctcgacgt
     1261 cgaatacatc cagatgcgca gcgcgctggg cccgcaagcg attctcaacg gcaacatcca
     1321 attcttcacc tcaccgcaat ccgcaatcaa tgccgcggtg gccggcttgc cattagtcgt
     1381 cgtgctctcg ctctatcgcg acaccccatg ggtactcgtg acgaataaag acatcaacag
     1441 gccccacgac ctcagcggca agcgcctcgc catctcggac attcgctcct cgccctacta
     1501 cttcgcccgc gccggactgc gcaaactcgg cttggaagag aaacaagtta acctggtcac
     1561 caccggcggc acctcgaaca gcttcgcgac tctgacgacc aatcaggtcg ccggcgcggt
     1621 attgagtccg cccttcgacg agaaagcggt ttccctgggc tacaagaagt ttcttttctt
     1681 aggcgacctg gccgatattc cttatgtagg gctgttcacg tcgcaagcag agatccgcgc
     1741 caaccgcgag cgcatccgcc gcaccatcgc cgcggtcatg aacgccatcg aatggcagaa
     1801 gagcaaccgc agcgaagcgg tcaaaatgat cgcggcgcgc taccagatta gcagcggcga
     1861 agccgaacgt tcctacgaca ccatggtcgc gatcctctcc cccgatggcg ccattaacat
     1921 gaaaaaaatc cgcggctacc taaatctcct gcgcgaggaa cggccagtag ccgatgacct
     1981 cgaaccggaa aagctggtgg acttttccat gctgccgggc gcgcgctaac cccaagcaag
     2041 cagcacttgc aatgaccgct ttaggttgcc aacattgaac catatgacga cgaagctgtc
     2101 ggtgctttct ttattt
//
LOCUS       DATIRS010000656         1848 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_48537, whole genome shotgun sequence.
ACCESSION   DATIRS010000656 DATIRS010000000
VERSION     DATIRS010000656.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1848)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1848)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1848
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48537"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..681
                     /locus_tag="VLM90_08295"
     CDS             <1..681
                     /locus_tag="VLM90_08295"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13004.1"
                     /translation="QFGYVGATILWRDEGVIKSIKDLPGKSLAISPGQAQWFLMPAYA
                     RINKIDFKAIKIQETAAPIQPAALATKKADFIIMFRASNDEVAEMAASKVGVKLSRVF
                     MKDTGLDIYGTSLIVKDEDVKKRPEFVRAYVEGTLEGLRYARDNQEEALKILLKHKPE
                     LDSVLTTQQLKNALTEVFLPLESVNVGMGYMKPEIMEKTVRVVNEYFDVGRKVSAKEV
                     FTNQFIKR"
     gene            689..1501
                     /locus_tag="VLM90_08300"
     CDS             689..1501
                     /locus_tag="VLM90_08300"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ13005.1"
                     /translation="MVGSDDVPPLIAVQQVSRVFSTASRTVTALDNVTFDIQPGNFVA
                     IVGPSGCGKSTLLKIISGLMPASFGTVTVAGHQVDSPLENVGMVFQAPVLLKWRSVLG
                     NVLLPVEFAKLNVANYIDKARALIKLVGLDGFEEMYPHELSGGMQQRASLCRALVTDP
                     QLLLMDEPFGALDAMTRDELDMELLRIWEERKKTVLFVTHSIQEAVFLSDLVFVMSAR
                     PGRLLETIAIDLPRPRTMEMMSTVKFGEYTLKIRALLASASDANATGIGSTM"
     gene            1595..>1848
                     /locus_tag="VLM90_08305"
     CDS             1595..>1848
                     /locus_tag="VLM90_08305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13006.1"
                     /translation="MTTPKGLTYAQAGVDIEAGDELVRRIGPIAKKTKVPGVLAGVGG
                     FSALFDLKSRGYRDPVLVSSTDGVGTKLKIAFQTGVHDTSG"
BASE COUNT          398 a          520 c          544 g          386 t
ORIGIN      
        1 cagttcggtt atgtcggcgc gacgattctg tggcgcgacg aaggtgtgat caaaagcatc
       61 aaggatcttc ccggtaaatc tttggcgatc agcccggggc aggcgcagtg gttcctgatg
      121 ccggcctacg cgcgcatcaa caagatcgat ttcaaagcga tcaagattca agaaaccgcg
      181 gcgccgatcc agcccgcggc gttggcgacc aagaaggccg acttcattat tatgttccgg
      241 gcttccaacg atgaagttgc cgagatggcg gcatcgaagg tcggcgtcaa gctcagccgc
      301 gtgttcatga aggacaccgg tctggatatt tacggcacca gtctgatcgt caaggatgag
      361 gatgtcaaaa aacggccgga gttcgtgcgc gcctatgtcg aagggacttt ggaagggctg
      421 cgatatgcgc gcgacaatca ggaagaggcg ctaaagattc tgctcaagca caaacccgaa
      481 ttggattcgg tcctgaccac gcagcagctc aagaacgcac tgaccgaagt gttcctgccg
      541 ttggagtcgg tcaacgtcgg catgggttac atgaagcccg agatcatgga aaaaactgtc
      601 agggtggtca acgagtactt cgatgtcggg cgcaaggtga gcgccaaaga agtcttcacc
      661 aaccagttta tcaagcgtta acctgccctt ggtcggaagt gatgacgtgc cgccgctgat
      721 cgccgtccaa caagtctcgc gggtgttctc gaccgcgagc cggaccgtta cggcgctgga
      781 taatgtcacc ttcgacatcc aaccgggcaa cttcgttgct atcgtcggtc cgagcggctg
      841 cggcaaaagc acgttgctga aaatcatctc gggcttgatg ccggcatcct tcggcacggt
      901 cacggtggcc ggccatcagg tcgatagtcc gctggaaaat gtcggcatgg ttttccaggc
      961 gccggtgctg ctcaaatggc gctcggtgtt gggcaacgtg ctgctgccgg tggagttcgc
     1021 taaactcaat gtcgccaatt atatcgacaa ggcgcgcgcc ttgatcaagc tcgtcggatt
     1081 ggacggcttc gaggaaatgt acccacatga gctttccggc ggcatgcagc agcgcgcctc
     1141 gctgtgccgc gcattggtga ccgacccgca gctgttgtta atggacgagc ccttcggcgc
     1201 actcgacgcc atgacccgcg acgagttgga catggagctg ctgcgcatct gggaggagcg
     1261 caagaagacc gtgctgttcg tcactcacag cattcaagaa gcggtgtttc tctccgacct
     1321 ggtgttcgtc atgtcggcgc ggccgggccg cctgctcgag accatcgcca tcgatttacc
     1381 gcggccacgc accatggaaa tgatgagtac tgtcaagttc ggtgaatata ccctcaagat
     1441 tcgcgctctg ctcgcctcgg ccagcgacgc caatgccaca ggaattggct cgaccatgtg
     1501 aatttctgtt ttcagtgcgc tattatcttg gcgatgacgt ggatgatccg cgcccacacc
     1561 ggtaaacgaa ttcaagcaac gaatttaggt tctaatgaca actccaaaag gtcttactta
     1621 cgcccaggcc ggcgttgaca tcgaagccgg cgatgaactg gtgcggcgca tcggccccat
     1681 cgccaagaaa accaaggtac ccggcgtgct cgccggcgtc ggtggcttca gcgcgctatt
     1741 cgatcttaaa tcgcgcggct atcgcgatcc ggtcttggtc tcgtccaccg acggtgtcgg
     1801 caccaagctg aagatcgcct ttcagaccgg cgttcatgac actagcgg
//
LOCUS       DATIRS010000657         1853 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1327393, whole genome shotgun sequence.
ACCESSION   DATIRS010000657 DATIRS010000000
VERSION     DATIRS010000657.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1853)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1853)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1853
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1327393"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1724
                     /locus_tag="VLM90_08310"
     CDS             <1..1724
                     /locus_tag="VLM90_08310"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HSQ13007.1"
                     /translation="GNKVIDPVTLEVIWNRFLSVANEQQDALIRTAFSTIVRESQDLA
                     CGMFDTKGRMISQSISGTPGHINAMATSMKHFLAAFPPDKLAPGDVLITNDPWQTAGQ
                     INDITITTPIFKNGKLVGLFANTCHSADIGGRILSAEAREVFEEGLRIPIMKLFDRGE
                     PNKILMQIVRTNVRQPDEVIGYFYAQTSCNETGGRALREMMDEFDLDSIDEVSEEIIR
                     RSEAAVRAEIAKLPAGEWSSETWSDGFEEPILIRCTVRVAGEEIFIDFTGSSPQSSRG
                     INVVLNYTHAYASFAIKAAICPDVPHNEGSFRPVHVSAPEGSILNALDPAPVASRQVI
                     GHFIPSAIFAAMSGALPGRLMAPGADPIWLSVWRGQNPSFTLTVFQVGGTGARPSKDG
                     LNAVGFPSGVAGVPAEVIESLSPVVLKRRELRSDSGGPGTWRGGLGQLTEFTRRGDGK
                     WSVSSIADRTQYPALGLLGGHAGAAGEVTTGDGEKLHAKALKDLTKGEVIHVNLPGGG
                     GYGDPFKRAPEKVLWDVIEGYVTAAAAEKQYGVAVTYSGLTDALVKLPEEWQVDVART
                     AAMRRGH"
BASE COUNT          381 a          533 c          580 g          359 t
ORIGIN      
        1 tgggtaataa agtcatcgat ccagttacgc ttgaagtgat ttggaaccgc ttcttgtcgg
       61 tggctaacga gcagcaggac gcgctgatcc gcaccgcctt cagcaccatc gtgcgcgaaa
      121 gccaggactt ggcctgcggc atgttcgata ccaaggggcg gatgatctcg cagtcgatca
      181 gcggcacgcc cggccatatc aacgccatgg caacgtcgat gaagcatttt ctcgcggcgt
      241 ttccgccgga taagcttgcg cccggcgacg ttttgatcac caacgatcct tggcagaccg
      301 ccgggcagat caacgacatc acgattacca cgccgatttt caagaacggc aaactggttg
      361 ggctgttcgc caacacctgc catagcgcgg atattggcgg gcggattctt tccgccgagg
      421 cgcgcgaagt atttgaagag gggctgcgca tcccgatcat gaagctgttc gaccgcggcg
      481 agcccaacaa aattctcatg cagatcgtgc gcaccaacgt gcgccagccc gacgaagtga
      541 tcggctattt ctatgcccaa acttcctgca acgaaaccgg cggccgggcg ctgcgtgaaa
      601 tgatggacga gttcgatctc gactccatcg atgaggtttc cgaggaaatc atccgccgct
      661 ccgaggcggc ggtgcgcgcc gagatcgcca agctgccggc cggcgaatgg tcgagcgaga
      721 cttggagcga tggttttgaa gaaccgatcc tgatccgctg cacggtgcgc gtcgccggcg
      781 aagaaatctt catcgacttc accggctcgt cgccgcaaag cagccgcggt atcaatgtcg
      841 tccttaacta tactcatgcc tacgcgagct tcgcgatcaa ggcggcgatc tgtcccgacg
      901 tgccgcataa cgaaggcagt ttccgcccgg tgcatgtcag cgcgccagag ggcagcatct
      961 tgaacgccct cgatcccgct ccagtggcga gtcgccaggt gatcggccac ttcattccga
     1021 gcgcgatctt cgcggccatg tccggggcgc tgcccggacg cttgatggcg ccgggggccg
     1081 atccaatttg gttgagcgtc tggcgcggcc agaatccgtc attcactctg acggtctttc
     1141 aagtcggcgg caccggcgcg cggccgtcaa aggacggact caacgccgtc ggttttccca
     1201 gcggcgtcgc cggcgtaccg gctgaggtaa ttgaaagctt gtcaccagta gtattgaagc
     1261 ggcgcgaact gcgctccgac tcgggcggtc cgggcacctg gcgcggcggt ttgggccagc
     1321 tgaccgagtt cacccggcgc ggcgacggca agtggagcgt cagttccatc gccgaccgca
     1381 cccagtatcc cgcgcttgga ttgttgggcg gccatgccgg cgcagcgggc gaagtcacca
     1441 ccggtgacgg cgagaaactt cacgccaaag cgctcaagga tttaaccaag ggcgaagtca
     1501 ttcatgtcaa tttgccgggc gggggcggct acggcgaccc gttcaagcgc gcgccggaaa
     1561 aagttctctg ggatgtcatc gaaggttatg taacggcggc agctgctgag aagcagtacg
     1621 gcgttgcggt tacgtatagt ggcctgactg acgcattggt taagttaccg gaagagtggc
     1681 aggtcgatgt ggcgcggacg gcggcgatgc ggcgagggca ctaagcgaat tacagattcc
     1741 aaattccgta ttacaaatcg gagaaatctg taatctgcaa tttgtaattt gcaattgaga
     1801 gcgaagcgac cctatggagc tgaaaggtag agtagccttg gtaaccgggg gtg
//
LOCUS       DATIRS010000658         1637 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1819773, whole genome shotgun sequence.
ACCESSION   DATIRS010000658 DATIRS010000000
VERSION     DATIRS010000658.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1637
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1819773"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(176..871)
                     /gene="sfsA"
                     /locus_tag="VLM90_08315"
     CDS             complement(176..871)
                     /gene="sfsA"
                     /locus_tag="VLM90_08315"
                     /inference="COORDINATES: protein motif:HMM:TIGR00230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000023 - maltose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA nuclease SfsA"
                     /protein_id="HSQ13008.1"
                     /translation="MRFKSRLIRGTLIQRYKRFLADVRLDNDEVVTAHCTNTGSMMGC
                     KEPGSKVYISRSNNLNRKLLYTWELVQTDNTWVGINTLHPNKLVPEAVESGVIAELSG
                     YPSIRREVKVSAHTRLDLCLEGPNGNCFVEVKNVTLATNGTAAFPDAVSERGRKHLKE
                     LMRLKRQGHRAAIVFVIQRSDCDNFRPADEIDSEYGRWLRRAVKAGVEALPYRAKVTA
                     KEIVLTERIATSL"
     gene            1081..>1637
                     /locus_tag="VLM90_08320"
     CDS             1081..>1637
                     /locus_tag="VLM90_08320"
                     /inference="COORDINATES: protein motif:HMM:NF013482.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13009.1"
                     /translation="MAKRVFKYVGHNVKRVDGVDKVTGAAKFVGDITVPGMLYGKILR
                     STYPHAHIRSIDASRAEALPGVIAVLTASDIADLNPIYNGRPVIAMNKVRYVGEPVAA
                     LAAEDLATAEEALALIHVDYEELPTVTNIEAAIKPGAPLVHEDKGSNIGTHEKVNRGN
                     ADEGFAQSDVIAEDHFTFPMVYHYA"
BASE COUNT          319 a          429 c          512 g          377 t
ORIGIN      
        1 taacatgccg cgtgagcccg tggcaatcgc tgcgccggcg cctttatggg ctttgatggc
       61 ggtcacggac aagagatttc tccctgcggt cgaaatgaca gcgcgggtcg tttgcctgtc
      121 atttgcgatg atgcgtagtg accgagaaat cttggcgcgc atgtgtgggt cgatgctaca
      181 ggctagtcgc aatccgctcg gtgagaacga tttctttcgc cgtcaccttg gcgcggtagg
      241 gcagcgcttc gacgccggct ttgacggctc ggcgcagcca acggccatac tcgctgtcga
      301 tttcatcggc cgggcggaag ttgtcgcagt cgctgcgttg aataacgaag acgatggcgg
      361 cgcggtggcc ttggcgtttg aggcgcataa gttctttcag gtgcttcctg ccgcgctcgc
      421 tcaccgcgtc gggaaaggcg gcagtgccgt tggtcgcgag ggtgacgttc ttcacttcga
      481 caaaacaatt accgttgggc ccttccaagc agagatccag ccgggtgtga gcgctgacct
      541 tgacttcgcg gcgtatcgat ggatagccgc tcaattccgc gatcacgccc gactcgaccg
      601 cttccggcac gagtttattc gggtgcaggg tgttgatgcc gacccaggtg ttgtcggttt
      661 ggaccagctc ccaggtatag agcagtttgc gattcagatt gttgctgcgc gaaatataaa
      721 ccttgctgcc gggctctttg cagcccatca tgctgccggt gttggtgcag tgcgccgtga
      781 cgacttcgtc gttgtccagg cgaacgtcag cgagaaatcg cttgtagcgt tggatcaagg
      841 tgccgcgaat gaggcgggat ttgaagcgca tgggcatggg tatagctgaa ggtgtggcag
      901 aatgatatcg ggattcggat tatctcccgc aaaggcgcaa agacgcaaag ttcagaaagt
      961 ttgtttttct ctggcgactt tgcgagaggc gtctccgagt cggactgttt ttgacttgtt
     1021 tcttgaactg ccagactcgc tttgttagga gtcgttaata atttttgatt gggagtgttc
     1081 atggccaagc gcgtattcaa atatgtcggg cacaacgtca agcgggttga cggggtcgat
     1141 aaagtcaccg gcgcggcaaa gtttgtcggt gacattacgg tccccggcat gctgtacggc
     1201 aaaattctgc gcagcactta tccgcacgcg catatccgct ccatcgacgc atcgcgcgcc
     1261 gaggcgctgc cgggcgtcat cgcggtgctg acggcgtcgg acatcgccga ccttaatccg
     1321 atctacaatg gccgaccggt gatcgccatg aacaaggtgc gctatgtcgg cgagccggtg
     1381 gcagcgttgg cggcggagga tctcgcgact gccgaagaag cgctggcgtt gattcatgtc
     1441 gactacgaag aattgccgac ggtgactaac atcgaagccg cgatcaagcc gggcgcgccg
     1501 ttggttcacg aagataaagg cagcaacatc ggcactcatg agaaggtcaa ccgcggcaac
     1561 gccgacgaag gttttgcgca gtcggacgtt atcgccgaag atcatttcac cttcccgatg
     1621 gtttaccact atgcgat
//
LOCUS       DATIRS010000659         2188 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_639778, whole genome shotgun sequence.
ACCESSION   DATIRS010000659 DATIRS010000000
VERSION     DATIRS010000659.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2188)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2188)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2188
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_639778"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1662
                     /locus_tag="VLM90_08325"
     CDS             <1..1662
                     /locus_tag="VLM90_08325"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HSQ13010.1"
                     /translation="FSLLILAPLAVVFYLSFFEGSLLDTVNRFSLKNYTTVFGEAFTY
                     KVLWNTAGFSFVALVVAFFFGIPTAWLVERSDFPGKTVLLTFMTIGLLIPGFAVAMGW
                     LFLLHPRIGIVNQLLQDTFGLIDAPLSITTITGMGWVQGLNLTPVAFIMTAGAFRAMD
                     PKLEEAAEASGASTARMILTVTIPLIWPGILAAAIYIFTVGLSAFDVPAIIGWSNRIF
                     TFSTYMYLMVSPQEGLPKYGASATFSIIGIILAAFLGWWYSRVQRRCHQYEIITGKAY
                     QPKIVKLGNRAVLAWLFIGLYLVLSKLIPLSMLLWASLLRYFEMPSVEAFARTSLQNY
                     VGLPWELVLRGAGNTSILMILTPTITVIVSLIFAWVVLRSQIRCRFVFDFFAFLPHAV
                     PNIIFAIGAVLLALFVLRGFIPLYGTIWLLLLLYIIVRLSYGTRMMNSSLIQIHPELE
                     EAAYVAGGSTWNVVRRILVPILTPPILYGWLWIALLTYRELTLAVLLSRVENMTLPVV
                     IWSIWLSGGFGQAAALTTVMLCILVPIIALYWFVAHRSGIGPRAM"
     gene            1721..>2188
                     /locus_tag="VLM90_08330"
     CDS             1721..>2188
                     /locus_tag="VLM90_08330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13011.1"
                     /translation="MKLAIVLCVTLLLADHGASQERRSKLRITNAGFTITALPLLAAQ
                     EWKIFNANNLDMEVILMQSALVPPALTQGDIDYQAGVGPASVNATMSGFATRAIWFSS
                     ERISYWLMAKPQFKTVESLKGRKVAVSGLGGTTHVAFNMALEKVGANPRDFVLV"
BASE COUNT          391 a          689 c          581 g          527 t
ORIGIN      
        1 ttcagcctgc tgatcctcgc gccattggcg gtggttttct atctaagttt cttcgagggc
       61 tcgctgctcg acaccgtcaa tcgcttctcg ctgaaaaact acacgacggt tttcggcgaa
      121 gcttttactt acaaggtact gtggaacacc gccggttttt cgtttgtcgc cctggtggtt
      181 gctttttttt tcggcatacc gacggcgtgg ttggtcgaac gcagcgattt tcccggcaag
      241 accgtcttgc tgaccttcat gaccatcggc ctgctcatcc ccggcttcgc ggtcgccatg
      301 ggctggctgt ttctgctcca tccgcgcatc ggcatcgtca atcaattgtt acaggacact
      361 ttcggtttaa ttgacgcgcc gctcagcatc acgaccatca ccggcatggg ttgggtgcag
      421 ggattaaatt taacgccggt ggcgttcatc atgaccgccg gcgcctttcg cgccatggac
      481 cccaagctcg aagaagcggc cgaagccagc ggcgccagca ccgcgcgaat gatcctcacc
      541 gtcaccatcc cgctcatctg gcccggtatc ctggcggcgg cgatttatat tttcaccgtc
      601 ggcctttccg ccttcgacgt gccggcgatc atcggctggt ccaaccggat ttttaccttc
      661 agcacttata tgtatttgat ggtgagcccc caggaagggc tgccgaaata cggcgccagc
      721 gcgacgttca gcatcatcgg catcatttta gcggcgtttt tgggctggtg gtactcacgc
      781 gtacagcggc gatgccacca atacgaaatc atcaccggta aagcctatca gccgaagatc
      841 gttaaactcg gcaaccgcgc cgtgctcgcc tggttgttca tcgggctgta tctggttttg
      901 agcaagctca tcccgctgtc gatgctgctt tgggcatcac tgctgcgata ttttgagatg
      961 ccgtcggtgg aagccttcgc gcgcacctcg ctgcaaaact atgtcggcct gccctgggaa
     1021 ctcgtcctgc gcggcgccgg caacacatct atcttaatga tcctgacgcc gacgatcacg
     1081 gtgatcgtca gtctgatctt cgcttgggtg gtgctgcgct cgcagatccg ctgccgtttt
     1141 gtcttcgact tcttcgcctt cctgccccac gccgtgccca atattatttt cgccatcggc
     1201 gcggtcctgc tcgcgctctt cgtcctgcgc ggcttcatcc cgctctacgg cacgatctgg
     1261 ctgttgctct tgctctacat catcgtccgg ctgagttacg gcacgcgcat gatgaacagt
     1321 tcgctgatcc aaattcaccc cgagctcgaa gaagccgcct acgtcgccgg tggcagcacc
     1381 tggaacgtcg tgcggcgaat tttggttccg atcctcacgc cgccgatcct ctacggctgg
     1441 ctctggatcg ccttgctgac ctaccgcgaa ctcactctcg ccgtcctgct ctcgcgagtc
     1501 gaaaacatga cgctgccggt ggtcatctgg agcatctggc tgagcggcgg tttcggccag
     1561 gccgcggcat tgacgacggt gatgctgtgc attctcgtgc cgatcatcgc cctctactgg
     1621 tttgtcgccc accgatccgg catcggcccg cgcgccatgt gatttgcttt tcgccgccgc
     1681 tcgccgtatg aaaatcatca tgccaacgcc aataccattc atgaagctag ccatcgttct
     1741 ttgcgtgaca ttacttttag ccgatcacgg cgccagccaa gaacggcgca gcaaattgcg
     1801 catcaccaac gccggcttca cgatcacggc gctgccgttg ttggcggccc aagagtggaa
     1861 aatcttcaac gccaacaact tggacatgga agtcatcttg atgcagtcgg cgttggtgcc
     1921 gccggcactc actcagggcg acatcgacta tcaagccggc gtaggacccg cctcggtcaa
     1981 cgccaccatg agcggtttcg ccacccgcgc catctggttt tcctccgaac ggatttccta
     2041 ctggctgatg gccaaaccac agttcaaaac cgtcgaaagc ttaaagggcc ggaaagtcgc
     2101 cgtcagcggg cttgggggca cgacccatgt cgccttcaat atggcgctgg aaaaagtcgg
     2161 cgcaaatcct agagactttg tcctagtg
//
LOCUS       DATIRS010000660         1898 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1132056, whole genome shotgun sequence.
ACCESSION   DATIRS010000660 DATIRS010000000
VERSION     DATIRS010000660.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1898
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1132056"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..951)
                     /locus_tag="VLM90_08335"
     CDS             complement(<1..951)
                     /locus_tag="VLM90_08335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13012.1"
                     /translation="MNQALNLVYGPRLIEEAVFLAQHDSDISAELQERRNRIYEIADA
                     DERDRRFNELNRACFDRLGLGKVIGQSLQEQPLIGAHVERGFVVGATQAKEEGAELFV
                     APDEINNCHGHRTLRLLLRPESLLNEDGLRPFLRHELFHISDMLDPTFDYEPTLPKAE
                     GGPTYDTLITCRYRVLWDVTIAGRMVRRGWCAATVRDQEFKDFRQAFPMLNGESDEFF
                     KRFFDAAAPRHNELAAFAFDPRAATDSVSNQAVAGTHCSLCRFPTHAFETAPANLGAE
                     VLAAIKADFPDWTPARGLCVQCADLYRGRQLSMAALKLLPG"
     gene            complement(948..1754)
                     /locus_tag="VLM90_08340"
     CDS             complement(948..1754)
                     /locus_tag="VLM90_08340"
                     /inference="COORDINATES: protein motif:HMM:NF014651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD family protein"
                     /protein_id="HSQ13013.1"
                     /translation="MNTNKSNVHQESNDLDATYCRAALYSALAIGFQAPTVENLARLL
                     TTESRAALCGAASLLYPSGEPDLISVIETFPNFNEAYLTDVASRHRELFGHTVRGPIP
                     PYETEYGNEALFQLPHELGDLMGFYNAFGLILKPGQRERADHISCECEFLMFLALKES
                     YALEHEDREMLAETQKAEKLFLRAHLGRFLPTFVSKLRRHEDSGFYGLLGELCLRLVT
                     AECSRLQVPSGATNLDLRPADDDRVPMACGSGTDCGAIPGACVPGEADSV"
BASE COUNT          396 a          530 c          579 g          393 t
ORIGIN      
        1 tccgggcagg agtttcaacg ccgccatcga tagttgacgg ccacggtaga gatcggcgca
       61 ttgaacacag agtccccttg ccggagtcca gtcgggaaaa tctgctttga tcgctgctaa
      121 aacttcagcg ccgagattcg caggcgcggt ttcaaaagcg tgcgtgggaa agcgacataa
      181 ggaacagtgg gttcccgcga ccgcttggtt tgagacactg tccgtggccg ccctcgggtc
      241 gaaggcgaag gcggcaagtt cattatggcg cggtgccgcg gcatcaaaga agcgcttgaa
      301 aaactcatca gactcgccgt tcaacattgg aaaggcttgg cggaagtctt tgaactcttg
      361 atcgcgaacg gtggcggcgc accagccgcg ccgcaccatg cggccggcga tggtgacgtc
      421 ccagagcaca cgatagcgac acgtaatcag ggtatcgtag gtcggcccac cctcggcctt
      481 cggcagggtt ggttcgtagt cgaatgtcgg atcgagcata tcgctgatat ggaacaattc
      541 atggcgtaag aaggggcgca acccatcttc attaagcagc gattcggggc ggaggagcag
      601 tcgcagcgtg cggtggccgt ggcaattgtt tatttcatcc ggcgcgacga acagctcggc
      661 gccctcttct ttggcctggg tcgcgccgac cacgaagccg cgctcgacgt gggcaccgat
      721 gaggggttgt tcttgcaagc tctggccgat gaccttgcct aaaccaaggc gatcgaagca
      781 agcccggttg agttcgttaa accgtcggtc gcgctcgtcg gcgtcggcga tttcgtaaat
      841 acgattgcgc cgttcttgga gctccgcgga aatatcgctg tcgtgctggg cgagaaacac
      901 cgcttcttcg atcaagcgcg gcccgtaaac gaggttcaga gcttggttca taccgaatcg
      961 gcttcccccg gcacgcaggc accgggtatc gcgccacagt cggtgccgct gccgcaggcc
     1021 atcggcacgc ggtcgtcatc ggccggtcga agatcgagat tggtggcgcc ggatggaacc
     1081 tgtaatcggc tgcattccgc cgtaaccaaa cgcaggcaaa gttcgccgag caatccatag
     1141 aagccggagt cttcatggcg cctaagcttg gagacaaagg ttggcaggaa tcggccgagg
     1201 tgggcgcgca gaaataattt ttccgccttc tgggtttccg ccaacatttc tcggtcttca
     1261 tgctccaatg cataactttc tttgagcgcg agaaacatca agaactcgca ttcgcagctg
     1321 atgtgatcag cgcgctcgcg ctggcccggc ttcaatatca ggccgaaggc gttgtagaat
     1381 cccatcaagt cgcccaattc atggggtagc tgaaacaacg cttcgttgcc gtactcggtc
     1441 tcgtaaggcg gaatcggtcc gcgcacggtg tgaccgaaca gctcgcggtg gcgtgaggcg
     1501 acgtccgtca aatacgcctc attaaaattg gggaacgtct cgattacgga aatcagatca
     1561 ggttcgccgg acggatagag cagactggcc gcgccgcaga gcgcggcgcg gctttccgtc
     1621 gtgagcaagc gggcgagatt ttccaccgtc ggcgcctgga agccaatcgc cagcgcgctg
     1681 taaagtgcgg ctcggcaata ggtagcatcg agatcgttac tctcttgatg gacattggac
     1741 ttattggtgt tcattggcta cctcatcggc cgaatcgttc aaaccgttca agccgttcaa
     1801 tcgcttcgct ccgttcaaac cgttttggag gttgcaatcg tttgaacctc cgataccctt
     1861 cctcccccgc gaacgcgggg gaggactaag gagggggt
//
LOCUS       DATIRS010000661         1833 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1524994, whole genome shotgun sequence.
ACCESSION   DATIRS010000661 DATIRS010000000
VERSION     DATIRS010000661.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1833)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1833)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1833
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1524994"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..355
                     /locus_tag="VLM90_08345"
     CDS             <1..355
                     /locus_tag="VLM90_08345"
                     /EC_number="1.17.7.3"
                     /inference="COORDINATES: protein motif:HMM:NF016438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HSQ13014.1"
                     /translation="ILKALKLRKDGMTFVACPSCGRADVDLVTLAKAVEERMLPYSNQ
                     NIHVAVMGCEVNGPGEARAADLGVAGGKGIGLIFKRGEVIRKVPEAQIVDALMEEVAK
                     FAAEKAAEASTAALN"
     gene            401..>1833
                     /locus_tag="VLM90_08350"
     CDS             401..>1833
                     /locus_tag="VLM90_08350"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR00409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HSQ13015.1"
                     /translation="MRWSKTLIPTLKEDPADAEVISHKLLMRAGYIRQVSRGIYDYFP
                     LALKVIRKIETIVRQEMDRAGAQELLLPIAAPAELWQESGRWEFYGKELLRFKDRHER
                     DFCLGPTHEELITDLVRRSVRSYRELPINLYQLQTKFRDEVRPRFGLMRGREFIMKDA
                     YSFHTDVEDCRREYDNMYQTYKRIFSRCGLSYRPVEADTGAIGGSLSHEFQVLAASGE
                     DAIVSCDGCEYAANVEKAEVKGRPPAARDISQESPKLNKVATPGKKTVPEVAELLKLP
                     ANQFIKTLVYKTDGGDLIAALVRGDHEINELKLRTVLGCREVTLADETAVTAATGVVP
                     GYMGPIGLQLRIVADLSVQGMRASVTGANEVNFHYIDIDQERDFTPSAFADLRLAVAG
                     DPCPRCASGKLQTHRGIEVGQVFYLGTKYSEKMGATYLDAEGREQAIEMGCYGIDISR
                     MVAAAVEQNHDANGIIWPLSIAPFQVLV"
BASE COUNT          385 a          531 c          554 g          363 t
ORIGIN      
        1 aatcttgaaa gcgctcaagc tgcgcaagga cggcatgacc tttgtcgcct gtccgtcctg
       61 cggacgcgcc gatgtcgatc ttgtaacgct ggcgaaggcg gtggaagagc gcatgctgcc
      121 gtacagcaat caaaacatcc atgtcgcggt gatgggttgc gaagtcaacg gtccgggcga
      181 agcgcgggcg gcggatctcg gcgttgccgg cggcaagggc atcgggctga tcttcaagcg
      241 cggcgaagtc attcgcaaag ttcccgaagc gcagatcgtc gatgcgctga tggaagaagt
      301 ggccaagttc gccgccgaaa aagccgctga agcctcgacg gccgccctca actgagcttt
      361 tctgtctcgt tcggcattgc ccattctcaa tcgagctaat atgcgttgga gtaaaaccct
      421 cattccgaca ttgaaagaag acccggcgga cgccgaggtc atcagtcaca agctcttgat
      481 gcgcgccggc tacattcgcc aggtcagccg cggcatctac gattactttc ccttggctct
      541 caaagtcatt cgtaagatcg aaaccatcgt gcgccaggaa atggaccgcg ccggcgcgca
      601 agaacttttg ctgccgattg ccgcgcccgc cgaactgtgg caggagagcg gccgctggga
      661 gttttacggc aaagaactgc tgcgcttcaa ggaccgccat gaacgggatt tctgcctcgg
      721 tccgacccat gaagagctaa tcactgattt agtccggcgc tcggtgcgct cctatcgtga
      781 gctgccaatc aatttatacc agctgcagac caagtttcgc gatgaagtgc gaccgcgctt
      841 cggtttgatg cgcgggcgcg agttcattat gaaggacgcc tacagttttc acactgatgt
      901 cgaggattgc cggcgcgaat acgacaacat gtatcagacc tacaagcgca tcttcagccg
      961 ctgcggtctg agctaccgtc cggtggaagc ggacaccggc gccatcggcg gcagcctgtc
     1021 ccatgagttt caagtgctgg ccgcgtccgg tgaagacgct atcgttagct gcgacggctg
     1081 cgagtacgcc gccaacgtcg aaaaggccga agtcaaaggc aggccgccgg cggcgcggga
     1141 tatttcccag gaatccccta agctgaacaa ggtcgccaca ccgggtaaaa agaccgtgcc
     1201 cgaggtcgcc gagttgctaa aattacctgc caatcaattc atcaagacgc tggtttacaa
     1261 gaccgatggc ggcgacttga tcgcggcgct ggtgcgcggc gatcatgaaa tcaacgaact
     1321 gaaactgcgc acggtgctcg gctgccgcga agtcactcta gccgacgaaa ccgcggtgac
     1381 ggcggcgacg ggtgtggtgc ccggctatat ggggccgatt ggtttgcaat tgcgcatcgt
     1441 cgccgactta tcggtgcagg gcatgcgcgc ctcggtcacc ggcgccaacg aagttaattt
     1501 ccattatatc gatatcgatc aggagcgcga cttcacgccg agtgcgttcg ccgacttgcg
     1561 ccttgccgtg gcgggcgatc cttgtccgcg ctgtgcgtcg ggtaagctgc agacccatcg
     1621 cggcatcgaa gtgggccaag ttttttatct cggcaccaag tacagcgaga agatgggcgc
     1681 gacctatctc gacgccgaag gccgtgagca ggccatcgag atgggctgtt atggcatcga
     1741 catcagccgc atggtcgctg ccgcggtcga gcagaaccac gatgccaacg gcatcatctg
     1801 gccgttgtcc attgcgccgt ttcaagtgct cgt
//
LOCUS       DATIRS010000662         1676 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1819976, whole genome shotgun sequence.
ACCESSION   DATIRS010000662 DATIRS010000000
VERSION     DATIRS010000662.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1676
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1819976"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            113..>1676
                     /locus_tag="VLM90_08355"
     CDS             113..>1676
                     /locus_tag="VLM90_08355"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSQ13016.1"
                     /translation="MTWKKGDVEAAFHESDIIVENTFTTQPVHQAYIEPHACVVQANS
                     SGGADVWACSKVPFALREQVATAFQKAAAHFVVKPCYIGGCFGGKGDFMDVPVAYLLS
                     LKSGRPVKMVMDYYEEFIAGNPRHAAIVNVKTGVKKDGRLLAHQLDFLFDSGAYAAFK
                     PQGYLYGPQESAGPYKIPNVLINEKIVYTNKIPCGHMRAPGDPQGFFANESQLDLIAR
                     RLGMDPITFRKKNLMRDDDLSPIGHVVPHIKSDEIVDTAVQTSGYRKPKRKYSGRGIA
                     IAQWLPHGGEARAVVTIDENGNVIVATGMVDQGAGTYTAMRQIAANELMIPIESVKFE
                     ILDTGKIAPDTGVGASRATRIFGSATQLAAAEACRAIVDAARKLWGIDDDLTLTGDGA
                     VRAKTGRTISYAEIVKKSGGPIFGRGHFKNFAVGPEAALCAQVAEVEVDPETGQVRLT
                     QLTTAHSTGTVINPLLHQGQIDGGAVMAMGSALMEELLLEQGRVVTTNFGESKIPSIR
                     DIPTLKTVIQEFP"
BASE COUNT          385 a          464 c          507 g          320 t
ORIGIN      
        1 gctcgatcct gtcgaagcga gcaagccggc tgccgcattg cttcatccga acgtgcaaag
       61 ctatcgaggc ctcctccatg aaatagtcga gcccagcaat agcttcatcg atatgacttg
      121 gaaaaagggg gacgtcgaag cggctttcca cgagtcagac atcatcgtcg aaaatacttt
      181 caccacccag ccggtacacc aagcttacat cgagccgcac gcctgcgtgg ttcaggcgaa
      241 cagttcaggc ggtgcggatg tttgggcgtg ttcgaaggtt cctttcgccc tgcgggaaca
      301 agtcgccacg gcattccaga aagccgccgc ccatttcgtc gtcaagccct gttacatcgg
      361 cggctgcttc ggcggcaagg gcgatttcat ggatgtgccg gttgcctact tgctgtcgct
      421 caagagcggc cggccggtga agatggtgat ggattattac gaggagttca tcgccggcaa
      481 tccgcgccac gcggcgatcg tgaacgtgaa gacaggcgtc aagaaagacg ggcggctgtt
      541 ggcgcatcaa ctggattttc ttttcgatag cggggcctac gcggcgttca agccgcaagg
      601 atatctctac ggcccgcagg aatcggcggg gccttataag atccccaacg tcctgatcaa
      661 cgagaagatc gtttacacca acaaaattcc ctgcggtcac atgcgcgcgc cgggcgaccc
      721 gcaggggttt ttcgccaacg aatcgcagtt ggatctgatc gcgcgccgac taggcatgga
      781 tccgatcaca ttcagaaaga agaatttgat gcgcgacgat gatctgtcgc cgatcggcca
      841 cgtggtgccc catatcaaga gcgacgagat cgtcgatacg gccgttcaaa cttcgggtta
      901 ccgcaagccc aaacggaaat acagcggccg tggaatcgcc atcgcgcagt ggctgccgca
      961 cggcggcgag gcgcgcgcgg tagtgacgat cgatgaaaac ggcaacgtga tcgtggcgac
     1021 gggcatggta gatcaaggcg ctggaactta cacggcgatg cgccagatcg ctgccaacga
     1081 gctgatgata ccgatagagt cagtgaagtt tgaaatcctc gacaccggta aaatcgctcc
     1141 ggacaccggt gttggagcaa gccgggcgac gagaattttc ggcagtgcga cgcagctcgc
     1201 tgccgcggag gcgtgccgcg cgattgtcga tgctgcacgc aaactctggg gcatcgatga
     1261 cgatctcact ttgaccggcg acggcgcggt tcgagcaaag accggcagaa caatcagcta
     1321 cgcagaaatt gtaaaaaaat ccggcggccc gatcttcggt cgcggccatt tcaaaaactt
     1381 tgccgtcggg ccggaggcgg ctctctgcgc tcaggttgct gaagtcgaag ttgatcctga
     1441 aacgggacag gtgcgattaa cccaactgac gacggcgcac agcacgggta cagtgatcaa
     1501 tccgctcctg caccagggcc aaatcgatgg cggcgcggtc atggcaatgg gttccgccct
     1561 gatggaggag ttgctgctcg agcaagggcg agtggttacg acgaatttcg gcgaaagtaa
     1621 aattccgtcg atcagagaca ttccgacgtt gaagaccgtc attcaggaat ttcccg
//
LOCUS       DATIRS010000663         1502 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_443621, whole genome shotgun sequence.
ACCESSION   DATIRS010000663 DATIRS010000000
VERSION     DATIRS010000663.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_443621"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1364)
                     /locus_tag="VLM90_08360"
     CDS             complement(<1..1364)
                     /locus_tag="VLM90_08360"
                     /inference="COORDINATES: protein motif:HMM:NF013197.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13017.1"
                     /translation="MSVVQSPLFEPVLWHDGGFKILDEIQVPQKLEYIEVTEVVQALD
                     AVREMRTRAYGQVLTFLYSNALVAQQYPGDDPAPLRLRLAQLTQQFCDVRPTFDFRSL
                     GGCVAEFFDKLPANGPVGATIARQAREFGGQITRARSARAKRAAAILPNPARVLTHCN
                     ISGELVAVAAYCKELGKEFSVIATETRPYLQGARLTAWELAQAGVQVSLIPDCAVAQV
                     MAQGEVNAVIVGADRVAQNGDVINKVGTYPIARMAKVYGVPFHALVQDPRSITRGADV
                     AIEERPAEELLVYHGRALVAGEQAHLKVRYPSFDLTPEEFITNYVGLDGLYTPETFRL
                     KYQAGAAVDARVARAGAKYLLIYGVPPPSQYAFLLSALKAERAESLLVPEMRPELWGA
                     RLIVAELLKRNAPTTVISDHMKGTLFAQGEIGKLCFFYDSLAAAGPQGICGSLLAVQL
                     AHLHG"
BASE COUNT          312 a          467 c          431 g          292 t
ORIGIN      
        1 ccgtgcaaat gcgctagctg caccgccaag agtgaaccgc aaatcccttg cggtcccgcg
       61 gccgccaagc tgtcatagaa aaagcatagc ttgccaatct ctccctgcgc aaacaacgtg
      121 cccttcatgt ggtcggaaat caccgtggtc ggggcattac gcttgagcaa ttctgctaca
      181 atcaagcgcg cgccccacag ctccgggcgc atttcgggaa ccaacaagct ctcagctctc
      241 tccgccttca acgcgctgag caaaaaagca tattggctcg gcggcggcac gccgtagatc
      301 agcaaatatt ttgcgccggc gcgcgccacc ctcgcgtcaa ccgcggcccc cgcctggtat
      361 ttcagccgaa aggtttccgg tgtgtagaga ccgtccaggc cgacatagtt ggtgataaac
      421 tcttccggcg tcagatcgaa cgatggatag cgcactttga gatgcgcttg ctcgccggcg
      481 accaatgcgc ggccatggta gactaatagt tcctcggccg gccgctcttc gatggccaca
      541 tcggcaccgc gcgtgatcga acgcggatct tgcaccaatg cgtgaaacgg cacgccgtac
      601 actttggcca tgcgcgcgat ggggtaggtg ccgactttgt tgatgacatc gccgttttgc
      661 gccacccggt cggcgccgac gatcaccgcg ttgacttcgc cctgggccat cacctgcgcc
      721 acagcacagt cggggatcaa tgatacttgc acgccagctt gagccagctc ccaggcggtc
      781 agccgcgcgc cctgcaagta cggccgggtt tcggtggcga tgacggaaaa ctctttgccg
      841 agctctttgc agtaagcagc caccgcgacc aattcgccgc tgatgttaca atgggtcaac
      901 acccgcgccg gattgggcag gatcgcagcg gcgcgtttag cgcgggcgct gcgcgcccgg
      961 gtgatttgac cgccgaactc ccgcgcctgg cgcgcaatag ttgcgccgac tgggccatta
     1021 gccggtaatt tgtcgaaaaa ctcagcgacg caaccgccga gactgcgaaa atcgaaggtc
     1081 ggacggacgt cgcaaaattg ctgggttaac tgcgccaacc gcaggcgcag cggcgccggg
     1141 tcatcgcccg ggtattgctg cgccaccagc gcattgctgt agagaaaggt cagcacctgg
     1201 ccgtaggcgc gggtcctcat ttcgcgcacg gcatcgagcg cctggacgac ctcggtcact
     1261 tcaatgtatt ccagtttttg cgggacttga atctcgtcga gaatcttgaa gccgccatcg
     1321 tgccatagaa ccggttcaaa cagcggactt tggacgacgc tcatttctta gctcaatgaa
     1381 aagagatggc taaaggtatt ggagtgcttg gcgcgccact tcgatggtct tttgctcggc
     1441 tgcgaaaaac accggatcgc gaaagccgaa cttgccatag agacattcat ccgacaccgc
     1501 ca
//
LOCUS       DATIRS010000664         2053 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_443625, whole genome shotgun sequence.
ACCESSION   DATIRS010000664 DATIRS010000000
VERSION     DATIRS010000664.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2053
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_443625"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(40..939)
                     /locus_tag="VLM90_08365"
     CDS             complement(40..939)
                     /locus_tag="VLM90_08365"
                     /inference="COORDINATES: protein motif:HMM:TIGR02122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HSQ13018.1"
                     /translation="MAIRMGTSELGGTFYTQGQAIAELFNRGRGMGEQCVVETSDASI
                     HNANQLDAGTLEFGFMASNWIGRAKDATAPFTKNIAIRMVAPANAGPMCFVRLANAPI
                     ASVADFAGKRVAIGTKGSGMEQHVQTIFKVLAISFDSFTPVHLGFAEGADALVAGQID
                     VQFHPPIPNAVLTDLSQRADIRVIPYAAAQRDKLFAAVPFYRPVTVEKDAFRGVVEDV
                     IQVGVVNVIVSHESVAESVVYAMAKTIADNLDKLPQMNPLFKGLKNLFEPLRTNGAAA
                     FEFGGVPLHPGAVRAYKDAGWIR"
     gene            1088..1738
                     /locus_tag="VLM90_08370"
     CDS             1088..1738
                     /locus_tag="VLM90_08370"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSQ13019.1"
                     /translation="MFVEKWMTPNPDTVAPEETISAVALEMSRRKVRHFPVCEPTRTG
                     RRMVGVVAKFDIARGFPNDLNPFSVEVTEESVPKPVSSVMTKKVISVLPDCPIEEAAR
                     LLRSNRIGCLPVLQDNQIVGIITQSDLFEAFIGMTAAKSGGTRIFIESDFEDSPVPTV
                     LDFCRLNGVEILSLMSFHENRLRRRDMSIFRFAGKLPKGFIPAMAAAGYRVVSVGE"
BASE COUNT          429 a          621 c          547 g          456 t
ORIGIN      
        1 cgccccaaca tttttttgcg gtcttggcgg ccaatactcc tatcttatcc agcctgcatc
       61 tttgtaagct ctgaccgcac caggatgcag cggcacgccg ccgaactcga aggcggcggc
      121 gccattggtg cgcagcggct cgaagagatt ttttaggcct ttgaatagcg gattcatttg
      181 cggcagcttg tctaaattat cggcgatggt tttcgccata gcgtagacta cgctctcagc
      241 gacgctttca tggctgacga tgacgttgac gacacccacc tgaatgacat cttcgacgac
      301 gccgcgaaag gcgtctttct ccaccgtgac cggacggtag aagggcaccg cggcaaacag
      361 cttgtcgcgc tgcgcggcag cgtaagggat cacccgaatg tcggcgcgtt ggctcagatc
      421 ggtaagcact gcgttgggaa tcggcggatg gaactgcacg tcgatctggc cggcgacaag
      481 cgcgtcggcg ccttcggcga aaccgaggtg caccggcgtg aaactgtcga aggaaatggc
      541 cagcactttg aagatcgtct gaacatgctg ttccatgccg ctgcctttgg tgccgatggc
      601 cacccgtttg ccggcgaaat cggcgacgga agctatcggc gcgttagcga ggcggacaaa
      661 acacatgggc ccggcattgg ccggcgccac catgcggatg gcgatatttt tcgtaaacgg
      721 cgccgtggca tctttggcgc ggccgatcca gttagacgcc atgaagccaa actcgagagt
      781 gccagcgtcg agctgattgg cattgtgaat actcgcgtcg ctggtctcga cgacgcactg
      841 ctcacccatc ccacgcccgc ggttgaaaag ctccgcgatc gcctgccctt gggtataaaa
      901 tgtcccgccg agctccgaag ttcccattct aatcgccatc acgcctccct gtcccttgct
      961 ttatctctgc ccttgtccct cttacaccag cccaccgccg agctgcaaat acgccgctaa
     1021 agataccggg caatttgccg aattaattga taatagctga tttctccctg actgttgaaa
     1081 cctaaccatg ttcgtcgaga aatggatgac gcccaatccg gacacagtgg ctccggagga
     1141 gaccatctcc gcggttgcgc tggaaatgag ccgccgcaag gttcgtcact ttccggtttg
     1201 cgaaccgaca cggaccggta ggcgaatggt cggcgtggtc gccaaattcg atatcgcccg
     1261 cggttttccc aacgatctga atcccttttc tgtggaagtc accgaagaat ccgtcccgaa
     1321 gccggtgtcc agcgtgatga ccaagaaggt tatttcggtg ttaccggatt gcccaattga
     1381 agaagccgct cgattgctgc gcagcaacag aatcggctgc ctgcccgtcc tacaagacaa
     1441 ccagatcgtc ggcatcatca cccaatcaga cctcttcgaa gctttcatcg gcatgacggc
     1501 agccaagagc ggtggcacac gcatctttat cgagtcggat ttcgaggata gcccggtacc
     1561 gacggtgctc gacttctgcc gccttaacgg ggtggaaatc cttagtctga tgtccttcca
     1621 tgaaaaccgc ctgcgccgcc gcgacatgtc gattttccgt ttcgccggca aattgcccaa
     1681 aggcttcatt cccgccatgg ccgccgccgg ttaccgcgtc gtcagcgtcg gcgaatagat
     1741 ctcagtcccc cggcatgaaa ctagttccat aatctcaaac caccgcggtc agttccctct
     1801 ctatctctat ctctctctgt ttcccgttgc tcgccgcaaa gcaatagcgc tatagtcgcg
     1861 agcgaattca gcggcaaggg agacgatcat gccatttctt aatcgcgacg gtaacgagat
     1921 ctattacgaa acccacggcg atggcccagc gttgcttttt tgcagcgtca ccggtctcga
     1981 tcatcaagcc tggaagtttc accaggtgcc ggagttttcc cgcgatcata aagtcatcct
     2041 gttcgactac cgg
//
LOCUS       DATIRS010000665         1503 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_836941, whole genome shotgun sequence.
ACCESSION   DATIRS010000665 DATIRS010000000
VERSION     DATIRS010000665.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1503
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_836941"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..964)
                     /locus_tag="VLM90_08375"
     CDS             complement(<1..964)
                     /locus_tag="VLM90_08375"
                     /inference="COORDINATES: protein motif:HMM:NF015662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13020.1"
                     /translation="MAAFQINKQDGAPEIRRRATFLYVLLAIVFIGLTARLVHLQLVH
                     GERYTFLSENNRVRLKRVPGTRGMIYDRHGELLVDSRPSFDLIFVPEDATQPEQTLRE
                     LAGRLGWDVDELLQTYQGNKSRSAFDEIVLGRDIEWAAVVAVEAHQLDLPGVSLRVRP
                     RRNYADGPIAAHILGYMGEINQRQLKSYKEQGYLLGDEIGQSWLERHWEDVLRGQHGG
                     QQVEVDALGRRVRVLHQVNDVPGYTVHLTLDRQMQQTAYEALQGKEGTIVAIDVNSGA
                     ILALASTPAFDPNVFARGIKGSEWNALINDRLRPLSNRATQGQFP"
     gene            complement(969..>1503)
                     /gene="mreD"
                     /locus_tag="VLM90_08380"
     CDS             complement(969..>1503)
                     /gene="mreD"
                     /locus_tag="VLM90_08380"
                     /inference="COORDINATES: protein motif:HMM:NF016019.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HSQ13021.1"
                     /translation="RFAILDDVPMKLFLLFFLAGIFLVVLQTTLFHLLPIGPVVPDLI
                     LVLCVYLGLYHPSVGAAFGSFLLGYSVDIISSPILGFNAFAMSLVYLAVYLCARSIWL
                     HHPIVSSVVVLLAALVKGATMVLIWAIFLSVDGFWAGAARYVLWEASLAAVLAPLVFA
                     LLRRGQNFIEKLTPAAP"
BASE COUNT          359 a          451 c          428 g          265 t
ORIGIN      
        1 gcgggaactg cccctgcgtc gcgcggttgc tcaacggccg cagccgatca tttatcagag
       61 cgttccattc gctccccttg atgccgcggg caaatacgtt gggatcgaaa gccggcgtgc
      121 tggcgagtgc caagatcgcc cccgagttga catcgatggc gacgatggtg ccttccttgc
      181 cctggagcgc ttcgtaggcg gtctgctgca tttgacgatc gagggtcaaa tgcacggtgt
      241 agccgggcac atcgttgact tggtgcagca cgcgcacccg ccggccaagc gcgtcgactt
      301 ccacctgctg gccgccatgc tggccgcgta agacatcttc ccagtgccgt tccagccagg
      361 actggccgat ctcatcgcca aggaggtagc cctgctcttt gtagctcttt agctggcgct
      421 ggttgatctc gcccatgtac cccaatatat gcgcggcaat tgggccatca gcgtagttgc
      481 gccgtggccg gacgcgcagg ctcacgccag gtaaatcgag ctggtgagct tccactgcaa
      541 ccaccgccgc ccactcgata tcccggccca agacaatttc atcgaaggcg gaccggctct
      601 tgttgccctg ataggtctgc aagagctcgt ctacgtccca tccaaggcgt ccggcgagtt
      661 cgcgcaaggt ttgctcaggc tgcgtggcat cttccggaac gaaaatgaga tcgaaggacg
      721 gtcggctgtc gaccagcaac tcgccatgac ggtcgtagat catgccgcgg gtgccgggta
      781 cgcgcttgag ccgcactcga ttgttttccg aaaggaacgt gtaacgttcg ccgtgcacca
      841 gctgcaagtg gacgaggcgc gcggtcagcc cgatgaacac gatggcgagc agcacgtaaa
      901 gaaaagtcgc gcgccggcgg atctccggcg cgccatcttg tttattgatt tgaaatgccg
      961 ccatcgcctt atggagccgc cggagtcagt ttttcgataa aattttgacc gcgccgcagc
     1021 agggcgaaaa ccaaaggcgc gagcaccgcc gccagcgaag cctcccaaag cacgtaacgg
     1081 gcggcaccgg cccagaaacc atcgacactc aagaagatcg cccagatcaa caccatcgtt
     1141 gcgcctttga ccagagccgc caacaaaacc accaccgaac tgacaatcgg atgatgcaac
     1201 caaattgagc gcgcgcatag atagacggct agatacacga gcgacatggc gaaggcgtta
     1261 aagcccaaga tcggactcga aatgatatcg acggaatagc ccaagagaaa tgatccgaac
     1321 gccgcaccga cggacggatg atagagcccc aagtaaacgc acaggacaag aatcaagtcg
     1381 ggcaccacgg gaccgatcgg caacaaatga aacaaggtcg tctgcaagac gacgagaaat
     1441 atccctgcga gaaaaaacaa taagaacagt ttcattggca catcgtctag aatagcgaac
     1501 cgg
//
LOCUS       DATIRS010000666         1606 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1722161, whole genome shotgun sequence.
ACCESSION   DATIRS010000666 DATIRS010000000
VERSION     DATIRS010000666.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1606
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1722161"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..511
                     /locus_tag="VLM90_08385"
     CDS             <1..511
                     /locus_tag="VLM90_08385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13022.1"
                     /translation="LVVQPYKMLQQAYAAVLPFEHNVRLMVTLPDSAALKDFDVVIVD
                     AAALTEKNLLPSSGALAVEAWKVPTVWIEIDRGPAAPSRDKLIRLPRPVQKDALHKAL
                     AECLAVTAGARPMGAAITAKSAAKEAKKGKARNAAAPAAPRPRPRIIELVEVVEEMSE
                     QEETSTQEN"
     gene            516..>1606
                     /locus_tag="VLM90_08390"
     CDS             516..>1606
                     /locus_tag="VLM90_08390"
                     /inference="COORDINATES: protein motif:HMM:NF012361.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HSQ13023.1"
                     /translation="MQLSKAYSHKEVEIRWYAHWMSTGLFAPAQNGKAFYSIVIPPPN
                     VTGSLHMGHALNNTLQDILCRYKRMDGFRVLWVPGTDHAGIATQNVVERQLAQKGLNR
                     SQLGREKFIEWVWAWKQEAGNAILHQLKSLGVSCDWSHERFTMDEGLSRAVREAFVKL
                     WEDKLLYRAERLINWCPRCKTALADIEVVHEESDGNLWHIRYPLADNPPQALIVATTR
                     PETMLGDTAVAVHPDDERYKNLLGRKIRLPITGRIVPLVADPFVDREFGTGALKVTPG
                     HDFNDFEIGERFDLDKIRIFDADARIDAESFLARGETGDWIERYAGKDRFEARKLVVA
                     ELKETGFLEKIDAHKLSVGRCYRCQTVIEP"
BASE COUNT          362 a          458 c          485 g          301 t
ORIGIN      
        1 tctcgtcgtt caaccctaca aaatgctgca gcaggcttac gcggcggtat tgcctttcga
       61 acacaatgtt cgattgatgg taactctgcc ggattccgcc gcacttaagg atttcgatgt
      121 cgtgatcgtc gatgccgcgg cgttgacgga aaaaaatttg cttccgagta gcggcgcgct
      181 cgccgttgag gcttggaaag tgcccaccgt gtggatcgaa atcgaccgcg gaccagcggc
      241 gccgagccgg gataagctga ttcgcctgcc acgaccggtt cagaaggatg cgctgcacaa
      301 ggccttggcg gaatgcctag ccgtgacggc cggagcaaga ccgatgggtg ctgcgattac
      361 tgcaaaatca gctgccaagg aagcgaagaa agggaaggca cgaaacgccg ccgccccggc
      421 tgcaccaagg ccaaggccta gaattatcga gctggtcgag gtcgtcgagg agatgtcgga
      481 gcaagaggaa acttcaactc aagaaaacta gagccatgca actttcgaaa gcctattcgc
      541 acaaagaagt cgagatcagg tggtacgccc attggatgag tactggccta ttcgccccag
      601 cgcaaaatgg gaaggctttc tattcgatcg tcattccgcc gcccaacgtc acgggttcgt
      661 tgcacatggg tcacgcgctc aacaacacgc tgcaggatat tctgtgccgc tacaagcgca
      721 tggacggctt ccgggtgctc tgggtgccgg ggacagacca cgccggtatc gcgacgcaaa
      781 acgtggtcga gcgccagctg gcgcaaaagg ggctgaaccg atcccagctg ggccgcgaaa
      841 aattcatcga gtgggtttgg gcatggaagc aggaagccgg caacgccatt ctgcatcaac
      901 tgaaatcgct gggtgtttca tgcgactgga gccatgagcg cttcacgatg gatgaagggc
      961 tgtcccgcgc cgtgcgcgaa gccttcgtga aactctggga agataaactg ctctatcgcg
     1021 ccgagcgctt gatcaactgg tgtccgcgct gcaaaaccgc cctcgccgat atcgaagtcg
     1081 tgcacgaaga gagcgacggc aacctgtggc atattcgtta tccgttggcg gataatccgc
     1141 cgcaggcgtt gattgtcgcc accacccgtc cggagacgat gctcggcgat accgccgtgg
     1201 cggtccatcc cgacgacgag cgatacaaaa acttgctcgg caggaaaatt cgtctgccga
     1261 ttaccggccg catcgtgccg ctggtcgcgg acccgtttgt cgaccgcgag ttcggcaccg
     1321 gcgcgctcaa ggtgacgccc ggccacgatt ttaacgactt tgagatcggc gagcgcttcg
     1381 atttggataa gatccgcatc ttcgacgccg acgcgcgcat cgacgccgaa tcctttctcg
     1441 cccgcggcga gaccggcgac tggatcgagc gctatgccgg caaggatcga ttcgaagcgc
     1501 gcaagctggt cgtcgccgag ttaaaagaaa ccggctttct ggaaaaaatt gacgcgcaca
     1561 aattgtcggt aggacggtgc taccgctgcc agaccgtgat cgagcc
//
LOCUS       DATIRS010000667         2962 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_345018, whole genome shotgun sequence.
ACCESSION   DATIRS010000667 DATIRS010000000
VERSION     DATIRS010000667.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2962)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2962)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2962
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_345018"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1232
                     /locus_tag="VLM90_08395"
     CDS             <1..1232
                     /locus_tag="VLM90_08395"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HSQ13024.1"
                     /translation="GAGALFEPANQAGLAATTAQMLREGTKSRNSLQIAEEIDRLGAS
                     ISAGSSFGSPDAVLGASGLSDNFDDWFNIAADILLNPSFAADELEKLKQRQRIQLREQ
                     RSSATFLLSERFNRAVFRNHPAANVSATPESIDLLTREALLKWHRERYAPQDAILGVA
                     GDVRAKDLIAKLEKRLAGWKKSEVKRSWPRAPVAASVRKVFLVDRPNSVQTTVSLGNI
                     AIDRRSPDYLAMVVMNDVIGGGASSRLFLNLREEKGYTYGVYSDFSATRYPGPWRAGG
                     NMRTEVTEGALIEFFQEIRRIREEKVPADELEASKRSIAASFALSLEQPTRVLNFAIT
                     NKIYGLPADYWDTYPARIMAITAEDVQRVARKYLDPDALQVVAVGDAGKIKPVLDKYG
                     AVEVYDANGALLPGNRS"
     gene            1406..>2962
                     /locus_tag="VLM90_08400"
     CDS             1406..>2962
                     /locus_tag="VLM90_08400"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HSQ13025.1"
                     /translation="MSPKTNVSSGALSGLRVLDLTGRMGGYCGLLLDNLGAEVILIEP
                     PGGDPMRLQGPFKNGGAQPEESLSFAAYHTNKFGVTLNLEEDEDKQKLCELVRRADAL
                     IEDKPVGYLDQHELGYAQLQSINPALVMTSISGFGMAGPYRDFKAPSIVAFAMGGLMN
                     LCGHPGRAPLMGPCDVAFRLGSIHAAFGTLVALFNRRGTGRGDHVDVSLQDVLAADPF
                     LRIITRYSVTGEVPERTGHSQSTTVAETYQCKDGYARIFVNQPDHWKRFVEWLGRPPE
                     LLDPKYENVQNRFPLRQTIDRLVEARTLNYDVKKFFEEFQSLRLAAAPINPPSAFLAD
                     EQTQLRGYVTEVDHAHLGRHPFPGDPYRFSETPWRVERGAPLRGEHQKEIDGEGAQPS
                     LWLAAAGAARAPTAPDRKPLEGVRVISFPTGIVGPALGGLLAEHGAEVISIEAGRAVR
                     SPQRGQRFTIASDLESNRDRKRIALDMKHPDGLALAKKLIAKADVVVENFSARVMASW
                     GIDYARVKEIR"
BASE COUNT          612 a          862 c          896 g          592 t
ORIGIN      
        1 gcggggcggg ggcgctgttt gaaccggcga atcaagccgg gctggcagct accacggcgc
       61 aaatgttgcg cgagggtacc aagtcgcgaa acagcctgca gattgccgag gaaatcgatc
      121 ggctcggcgc gtcgatcagc gccggttcgt cgtttggctc gccggacgcg gtgctcggcg
      181 cgtcgggttt gagcgataac ttcgacgact ggttcaatat cgccgccgac attctgctca
      241 accccagttt tgccgccgac gaattggaga aactcaaaca gcgccagcgc atccagttgc
      301 gcgaacagcg ctcgtcggcc acttttttgc tgagcgagcg tttcaaccgc gcggtgttta
      361 gaaatcatcc cgcagccaac gtttccgcga cgccagagtc catcgacctg ctcaccagag
      421 aggctttgct caagtggcat cgcgaacgct acgcgccgca ggacgctatc ctgggcgtcg
      481 ccggcgacgt gcgcgccaag gatctcatcg ctaaactgga aaagcgcttg gccggttgga
      541 agaagagcga ggtcaagcga agctggccgc gtgcgccggt ggcggcatcg gtgcgcaaag
      601 tttttctcgt cgatcgtccc aattcagtgc aaactacggt gtcgctcggt aatatcgcca
      661 tcgaccggcg cagcccggac tatctggcga tggtggtgat gaacgatgtg atcggcggcg
      721 gcgcttcgtc gcggctgttt ctcaacctgc gcgaggagaa gggctatacc tacggcgtct
      781 acagcgattt cagcgcgacg cgctatcccg gcccttggcg cgccggcggc aacatgcgca
      841 ccgaggtgac cgaaggcgcg ctcatcgagt ttttccaaga gatccgccgc atccgcgagg
      901 aaaaagtccc ggcggatgaa ttggaagcga gcaagcgctc gatcgcggca agcttcgcat
      961 tgtccctgga acagccgacg cgcgtgctta actttgcgat cacgaataaa atctatgggc
     1021 tgcctgccga ttattgggat acttatccag cccgcatcat ggcgatcaca gccgaggacg
     1081 tgcaacgcgt ggcgcgcaaa tatttagatc ctgatgcctt gcaagtggtc gccgtgggcg
     1141 acgccggtaa aatcaagccg gtcttggata aatacggcgc agtcgaagtt tacgacgcca
     1201 acggcgcgct cctgcccggc aaccggtcct aacctttcct acggcgcaac ttcttctcag
     1261 tgcgaaaacc catgggtcga tggtgtcgct gcactgaatc gttcgatgcg atcgcccgat
     1321 cgtctctctt gtgtcttgtc gagatctgta aatatactcg aagaacgaac acctcggtta
     1381 gttagaacga aggatggaaa cgaagatgtc gcctaaaaca aatgtctcaa gcggcgcgtt
     1441 gagcgggttg cgcgtgcttg atctcaccgg aaggatgggc ggatattgtg gtctgctgct
     1501 cgacaatctg ggcgctgaag taattcttat cgaaccgccc ggcggcgacc ccatgcgctt
     1561 gcaaggaccg ttcaagaacg gcggtgcgca acccgaggag agtttatctt tcgccgctta
     1621 tcacacaaac aagttcggcg taactcttaa cctggaagaa gacgaggata aacagaagtt
     1681 gtgcgagttg gtccgacggg cggacgcgct gatcgaagac aaacctgtcg gctatctcga
     1741 tcaacacgag ctcggctacg cgcagttgca atccatcaac ccggcgctgg tcatgacctc
     1801 gatcagcggt ttcggaatgg ccgggcccta tcgcgatttc aaagcgccga gtatcgtcgc
     1861 gttcgccatg ggcggactga tgaatctctg cggtcatccg gggcgggcgc cgcttatggg
     1921 tccgtgcgat gtggcgtttc gcttgggctc catccacgcc gccttcggca ctctggtagc
     1981 gctctttaac cggcgcggca cgggacgggg cgaccatgtc gatgtgtcgc tgcaagacgt
     2041 gctcgccgcc gatccgtttt tgcgcatcat cacgcgatac agtgtcaccg gcgaagtgcc
     2101 cgagcgcacg ggccacagcc agtcgaccac cgtggcggaa acttatcaat gcaaagacgg
     2161 ctacgcgcgg atcttcgtta atcagccaga ccattggaag cgtttcgtcg aatggctcgg
     2221 ccgtccgccg gaattactcg acccgaaata tgaaaatgtt caaaatcgtt ttccgctgcg
     2281 ccagaccatc gaccgcttgg tggaagcgcg cacgctcaac tatgacgtga agaaattttt
     2341 cgaggaattc caatccttgc gtttggcggc ggcgccgatc aatccaccca gcgcttttct
     2401 cgctgacgag cagactcaac ttcgagggta tgtgaccgaa gtcgatcatg cccatttagg
     2461 tcgccatccc ttccctggtg atccttaccg attttccgaa actccgtggc gtgtcgaacg
     2521 cggcgcgccg ttgcgcggcg agcatcagaa ggaaatcgac ggcgaggggg cgcagccatc
     2581 gctgtggctc gcggcagccg gcgcggcccg agcgccgacg gcgccagaca gaaaaccact
     2641 cgaaggcgtt cgggtcatca gtttccccac cggcatcgtc ggcccggcgc tgggcggttt
     2701 actcgccgag catggtgccg aggtgatttc catcgaagcg ggacgcgccg tgcgcagtcc
     2761 gcagcgcggc cagagattta caatcgcctc ggatctcgag agcaatcgtg accgcaagcg
     2821 catcgcgctc gatatgaaac atcccgacgg cttggctttg gcgaaaaaac tgatcgccaa
     2881 agccgacgtc gtggtagaaa atttcagcgc ccgcgtgatg gcgagttggg ggattgatta
     2941 cgcgcgcgtt aaagagattc gt
//
LOCUS       DATIRS010000668         1942 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1328247, whole genome shotgun sequence.
ACCESSION   DATIRS010000668 DATIRS010000000
VERSION     DATIRS010000668.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1942)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1942)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1942
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1328247"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..665)
                     /locus_tag="VLM90_08405"
     CDS             complement(<1..665)
                     /locus_tag="VLM90_08405"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13026.1"
                     /translation="MKPRSDNLRRNKRTNGATRIIDADGHVRETDEEIIEYMSAGYRN
                     RRDAMLYFPLTPHHGWHRSIPANDFRHQDFRVPDWREWVGKLDEGKFEMTVLYPTRFM
                     HIGQIGNPPYAVEICRAYNDYLHDRFLCHDRRFRGMALLPLQDPGAAVKELRRAVKKY
                     GMLGGILPADGLQLPLGHKQYWPIYQEADQLGCALSIHSCNSLRDNDRYLVPNEAAAL
                     THV"
     gene            882..1922
                     /locus_tag="VLM90_08410"
     CDS             882..1922
                     /locus_tag="VLM90_08410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13027.1"
                     /translation="MHIGRKTSFVFATVQLGAFLFACGAFAQTPYYAGKTITIVRGGG
                     AGGSGEFQSRALMPYLSKHIPGNPTITMEFMNGASGRKAANYFYTAKPDGLKIASAGA
                     MIPGPILGLSGSNYDIDKFPYIGSTETGNPYVFFTRKLANLDSLDKVRRTPGIRIGAH
                     SVGHSVYVTARMFAYFLEFKDPKFVVGFNDPEMDVALNTGELDARTSSNVDGVVKDLG
                     NQVQFHATISNPKGRFDQRLPGLADIDTFLKNDKERKVVDLFRSFQVPRWPHHLSPGT
                     PPELVKILREAMAKTFKDPGFQQDFKKLMGREPTPLTGEEVEKAVRELPRDPEVIALY
                     KKLADAGALPPR"
BASE COUNT          397 a          566 c          571 g          408 t
ORIGIN      
        1 atcacgtggg tgagcgccgc cgcctcgttg ggcaccagat aacggtcgtt atcgcgcagc
       61 gaattgcatg agtggatgga cagagcacag cctagttgat cggcttcctg gtaaatgggc
      121 caatattgct tgtggcctaa cggcagctgc aggccgtccg cgggcaagat gccgccgagc
      181 attccatact tctttaccgc gcggcgcagt tctttgaccg cggcgccggg atcttgcagc
      241 ggcagcagcg ccataccgcg gaagcggcgg tcgtgacata gaaatctatc gtgcaggtag
      301 tcattgtaag cgcggcaaat ctccacggcg tagggcggat tgccgatctg gccgatgtgc
      361 atgaatcgcg tcggataaag cacggtcatc tcgaatttcc cttcatcgag tttgcctacc
      421 cactcgcgcc agtcgggcac gcgaaagtcc tggtgacgaa agtcgttggc gggaatcgag
      481 cggtgccagc cgtggtgcgg cgtgagcggg aaatagagca tggcgtcacg ccggttccgg
      541 tagcccgccg acatgtactc gatgatctcc tcgtcggtct cgcgcacatg gccgtcggca
      601 tcgatgatgc gggtggcgcc gtttgtccgt ttatttcggc gtagattgtc agagcgtggt
      661 ttcattgcat ggttctcccg gtgattgctt gatcgttttc tcgcacggtg cttgacgact
      721 tgtcaatgaa atcgccccgc gatcaccaat tgtgcatccg tgtcggcttt atagcctagt
      781 aggcggtcgt ccgcgagcgc aggtcgcgaa gccgcgattc ttttcgcttg aaatcaaatc
      841 tcaatgcgct atgagttggc cgaaacggag gaggatgaac catgcacatt ggcagaaaaa
      901 ccagcttcgt attcgcgacg gttcaacttg gagcgttttt gttcgcgtgt ggcgctttcg
      961 cacagacgcc ctattacgcc ggcaagacga tcaccatcgt gcgcggcggc ggcgccggcg
     1021 ggtcgggcga gtttcaatcg cgcgccctca tgccctattt aagcaaacat attcccggca
     1081 atccgacgat cacgatggaa tttatgaacg gcgcctcggg gcgcaaggcg gcgaactatt
     1141 tttacacggc caaacccgac ggtctgaaga tcgcctccgc gggagccatg attcccgggc
     1201 cgatactcgg tttgtcgggg agcaattacg acatcgacaa attcccttac atcggctcga
     1261 ccgaaacggg caatccctac gtcttcttca cccgcaagtt ggccaatctc gacagcctcg
     1321 acaaagtccg gcgcacgcct ggcatccgca tcggcgccca ctcggtcggc cactccgtgt
     1381 acgtcaccgc gcgcatgttc gcctattttc tcgagttcaa agatccgaag ttcgtcgtcg
     1441 gtttcaacga tcccgagatg gatgtggcgc tcaacaccgg cgagctcgac gccaggacga
     1501 gcagcaatgt cgacggcgtg gtcaaagacc tgggcaatca ggtgcaattt cacgcgacca
     1561 tttccaatcc gaaagggcgg ttcgatcagc gcctgccggg tcttgccgat atcgacacat
     1621 ttttaaagaa cgataaagaa cgcaaggtcg tcgatttgtt tcgctcgttt caggtacctc
     1681 gctggccgca ccatctctcg ccaggaacgc cgcctgagtt ggtaaaaatt ctccgcgagg
     1741 cgatggcgaa gacgttcaaa gatccgggct tccagcagga cttcaagaaa ctcatgggtc
     1801 gggaaccgac gccgctcacc ggcgaagaag tggagaaggc ggtcagggaa ctaccccgcg
     1861 accccgaggt catcgctctc tacaagaagc tggccgacgc cggcgcactg ccgccgcgct
     1921 gagcctggca acccttggag ca
//
LOCUS       DATIRS010000669         1831 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1230445, whole genome shotgun sequence.
ACCESSION   DATIRS010000669 DATIRS010000000
VERSION     DATIRS010000669.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1831
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1230445"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(177..1574)
                     /locus_tag="VLM90_08415"
     CDS             complement(177..1574)
                     /locus_tag="VLM90_08415"
                     /inference="COORDINATES: protein motif:HMM:TIGR01845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HSQ13028.1"
                     /translation="MAQTAFALIAAFLFAGCTLGPDYLRPNFLIPNNHRGIVEVPQAE
                     SIADIPWWELFKDPVLQELTREALTNNYDLRTAAARVEEARSQIGVARSFLYPQVSVN
                     GGGSAEQVSRRTEPPQSFGANRTYQNWVMGFSMAWELDVFGRIRREAEAATGVFLATE
                     QARRGVLIALIADVAQSYFILRELDLELEISRRTVGVNDETVEFYRRRVSGGVSNQLE
                     FDQAFANRSRTAATIPELERQIATQENLINFLVGRNPGAIPRGTALTDQYLPPSIPAG
                     LPSALLERRPDVKAAEDLLFAANANIGAAKALFFPNFSLTAALGSASHDLSNIVDRRA
                     AIWSVAGGVLQPVFQGWRIFFNYEATKARFEQAVAQYEKAAQNGFREVADALVGVEKF
                     RESRAELERGVQALANAARLSRLRYDTGLANYLEILIADQQLFDQEILLARARGAQLT
                     TVVQLYRALGGGWQP"
     gene            complement(1576..>1831)
                     /locus_tag="VLM90_08420"
     CDS             complement(1576..>1831)
                     /locus_tag="VLM90_08420"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HSQ13029.1"
                     /translation="LRFRPILMTAFAFILGVVPLMIASGAGSGAQNVMGTAVFWGLLV
                     ATFMGVFLIPGNFAFVEGLGRRKKPVPAAVPTVPSHEGAH"
BASE COUNT          378 a          570 c          519 g          364 t
ORIGIN      
        1 ctatcgaaac tgtcagagcg cagccgcttt tcctatccgt ctatccttaa cggtttgaac
       61 gttttgtccg ccaaaggacg gatcagcccc aaattgtttt cagcctgagg ctgatcagcc
      121 ctcaatttgt ttggctgagg ctgaaacgac ttgaacgttt gaactcggtt cttattttac
      181 ggctgccagc cgccccctag ggcccggtaa agttgcacaa cggtagtcaa ctgagcgccc
      241 cgcgcgcgtg ccagcaagat ctcttgatcg aaaagttgct ggtccgcgat cagaatctcc
      301 agataatttg ccaggccggt gtcatagcgc aggcgcgaca agcgcgccgc gtttgcgagc
      361 gcttgaacgc ctcgctccag ttcggcacgc gactccctga acttctcgac gcccaccagc
      421 gcatccgcca cctcccggaa gccgttctgc gccgctttct catattgcgc caccgcctgc
      481 tcgaagcgag ctttagtcgc ctcgtagtta aagaaaatgc gccagccctg gaagacgggc
      541 tgcaagacac cgccggcaac cgaccagatc gccgcgcgcc tgtcgactat gttcgatagg
      601 tcatggctgg cgctgccgag cgccgcagtc agtgaaaaat tcgggaagaa aagcgctttg
      661 gcggcgccga tattggcatt ggccgcgaac agcaaatcct ccgcggcttt gacatcgggc
      721 cggcgctcaa gcagcgccga gggcaatccg gcaggtatgc ttggcggtag gtattggtcc
      781 gttaaagcgg tgccccgagg aatggctccg ggattgcggc cgacaagaaa gttgatgaga
      841 ttctcttgcg tcgcgatctg gcgctctagc tccggaatgg tcgcagccgt gcgcgagcgg
      901 ttggcaaacg cttggtcaaa ttcgagctgg ttggaaactc cgccggaaac ccgcctacgg
      961 tagaattcca ctgtttcatc gttgaccccc accgtgcgcc gacttatctc cagttcgaga
     1021 tcgagttcgc gcaaaatgaa ataagattgg gcgacgtcgg cgatcaaagc gatcaagacg
     1081 ccgcgccgcg cttgctccgt ggcgagaaaa acccctgtcg ccgcttccgc ttcgcgccta
     1141 atcctgccga agacgtcgag ctcccacgcc atgctaaatc ccatgaccca gttttggtaa
     1201 gtccggttag cgccgaatga ttgcggcggc tcggtccgcc gcgacacctg ttccgcgctg
     1261 ccgccgccgt ttacactcac ttgcggatag agaaacgagc gcgccacgcc gatctgcgat
     1321 cttgcttcct ccacacgcgc ggcagccgtc cgcagatcat aattattggt caatgcctct
     1381 cgggtcagct cctggagcac cggatcctta aagagctccc accagggaat gtcagcgatc
     1441 gactcggcct ggggaacttc cacgattcca cgatggttat ttggaatcag gaaattgggc
     1501 cggaggtagt ccgggccaag ggtgcatccg gcaaacagaa acgcagcgat cagggcgaat
     1561 gcagtttgcg ccatctcagt gtgccccctc gtgcgatggc accgtcggaa ccgcggccgg
     1621 caccggcttc ttccttctcc ccagtccctc gacgaacgcg aagttgccgg gtatcagaaa
     1681 cactcccata aatgtggcga ccagcagtcc ccagaagacc gcggtgccca tgacgttctg
     1741 cgcgccggag ccggcgccgc tggcgatcat cagtggtacg acacccagga tgaatgcaaa
     1801 cgcggtcatg aggatcggcc gaaagcgcaa c
//
LOCUS       DATIRS010000670         1746 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1722460, whole genome shotgun sequence.
ACCESSION   DATIRS010000670 DATIRS010000000
VERSION     DATIRS010000670.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1722460"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1126
                     /locus_tag="VLM90_08425"
     CDS             <1..1126
                     /locus_tag="VLM90_08425"
                     /inference="COORDINATES: protein motif:HMM:NF018485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ13030.1"
                     /translation="AFGWSRGATAGIFSIVLAVDALLSPGAGYLLDRYGTRKIAIAGC
                     LTLGVGLFLSSQVSALWQLYICFGLVLATGFTLTGMVPHIFLISEWFSANRASAIGVV
                     YAGSGVGIMLLAPLSEWLLSGYGGERTFEIYAAMVMVLLLPIVLVSYQPGPHGHSGGH
                     LRLRKDEQKQWTAKLALQSLQFWLLFVARIGAACGTTVIVTHQVAHVVDVGFSKLLAA
                     SIFGFAGITSSFGRVIFGFIADRLTKQAAYTLNIAMTVVGVGALMLLRDPSQTWLLYV
                     YVIFFGIGFGSRAVIFSSLTADIFSGKGFGSILGYSTVAVGVGGALGSYFGGVFHDWT
                     GSYTMSFTLSTLLLAVSDVCIWLAAVPAVARYDQRLWQRT"
     gene            1234..1602
                     /locus_tag="VLM90_08430"
     CDS             1234..1602
                     /locus_tag="VLM90_08430"
                     /inference="COORDINATES: protein motif:HMM:NF015690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF309 domain-containing protein"
                     /protein_id="HSQ13031.1"
                     /translation="MDARLRDGIRLFNDRQFFECHEVLEGYYQNSEVETKPFLEGLIQ
                     LAAAFRMFVDFGEVKGPVRAIYQALIRLENYQPAFLQVRVKDLSTEVEAWAKAAEAAG
                     AMPSAADIPRIQLQRFSLFS"
BASE COUNT          291 a          487 c          523 g          445 t
ORIGIN      
        1 tgccttcggt tggagccggg gggctacggc ggggatattt tccatcgtcc ttgccgtcga
       61 cgcgctgctt tctcctggag ctggttattt acttgaccgc tacggcacca ggaaaattgc
      121 cattgccggc tgtctcactc tgggagttgg gctttttctc agcagccagg tatcggcgct
      181 gtggcaactc tatatttgct tcgggctggt gctcgccacc ggcttcaccc tgactggcat
      241 ggtgccgcat atttttctta tctcagaatg gttttcggcc aatcgcgctt cggccatcgg
      301 cgtggtatac gccggcagcg gcgtcggtat catgttgttg gcgccgctca gcgaatggct
      361 gctttccggc tatggcgggg agcgcacttt cgaaatctac gcggcgatgg tgatggtctt
      421 gctactgccc atcgtgttgg tttcctatca acctgggccg cacgggcata gcggcggtca
      481 tcttagactg aggaaagacg agcagaagca gtggaccgcc aaactggcgt tgcagagttt
      541 acagttctgg ctgttgtttg tcgcccgcat tggcgcggcc tgcggcacga ccgtcattgt
      601 cacccatcag gtcgcccatg tcgtcgatgt cggctttagc aaattactgg cggcgtcgat
      661 tttcggtttc gccggcatca ccagcagttt cggccgggta atattcggct ttatcgccga
      721 ccgcttgacc aaacaggcgg cctatacgct gaatatagcc atgaccgtcg tcggcgtcgg
      781 cgccttgatg ttgctgcgcg atccgagtca gacctggctg ctttacgtct acgtgatttt
      841 tttcggcatc ggcttcggct cgcgggcggt gattttttcc tcgctcaccg ccgatatctt
      901 ttccggcaaa ggcttcggtt cgatcctcgg ttattccacg gttgcggtcg gcgtcggcgg
      961 cgcattgggg tcgtacttcg gcggcgtgtt tcacgactgg actggcagtt acacgatgtc
     1021 cttcacgctt tccactttgt tgctggcggt ctccgatgtc tgcatctggc ttgccgcggt
     1081 tccagcggtg gcccggtacg atcaacggct atggcagcga acctaaatgg ttccagctgt
     1141 tccacttgtt ccaaaggttc cagacgggtc catgccgagc gctcttacct tgaggctagg
     1201 attagaactt gctaatttac acttttcaaa attatggatg ctcggctgcg agacgggata
     1261 cgtttattca acgatcggca attcttcgaa tgccacgaag ttctggaggg gtattaccag
     1321 aacagcgaag ttgagaccaa gccgtttctg gagggcttga ttcagctggc cgcggccttt
     1381 cgcatgtttg tcgacttcgg cgaggtgaag gggccggtgc gggcgattta ccaggcgctg
     1441 attcgcctcg agaactatca gccggcgttt ctgcaagtgc gagtgaagga tctcagcact
     1501 gaggtcgagg cctgggccaa agcggccgag gccgcggggg ccatgccgtc ggccgccgac
     1561 attccaagaa ttcagctcca acgtttcagc cttttttcat gaccgactca tgaccgatct
     1621 tgcgctcagc gaaaagctcg ctcagttcct gcgcggaacc tggacaggcg gtaagcgcat
     1681 tcaaggtatc caggggggcg cgcgcgatta cttgcttgct atcgccgccg cggcggccca
     1741 gcggcc
//
LOCUS       DATIRS010000671         1626 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1722468, whole genome shotgun sequence.
ACCESSION   DATIRS010000671 DATIRS010000000
VERSION     DATIRS010000671.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1626)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1626)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1626
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1722468"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..622)
                     /locus_tag="VLM90_08435"
     CDS             complement(<1..622)
                     /locus_tag="VLM90_08435"
                     /inference="COORDINATES: protein motif:HMM:NF027640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4956 domain-containing protein"
                     /protein_id="HSQ13032.1"
                     /translation="MNRLTLVVLGTFTAILLISGGLSYVLRHQTKLDNAAVTSNAGVG
                     SGATTSPSPSPQTQKTGGGSIFGDLFGQDNPDVHPATSGSWQTTAATVTLRFSLAALL
                     AAILAFRPRRGVANSRRNPYVGQTQILMAVVAAAMMMVVGDSAARAFGIFAAASLVRF
                     RTNIRDPKEITVLLVCLGVGLAAGVGRWDMAVILSLFVLLSIGILEW"
     gene            complement(667..1275)
                     /locus_tag="VLM90_08440"
     CDS             complement(667..1275)
                     /locus_tag="VLM90_08440"
                     /inference="COORDINATES: protein motif:HMM:NF024490.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13033.1"
                     /translation="MIAPVNLRGRMLKLIERETNNAEAGRPAGITAKINRLTDLDTID
                     ALYRASQAGVKIDLIVRGSCMLRPGVSGLSQSVHVRSIVGRFLEHSRIFHFANGGEDE
                     VYIGSADWMARNMDRRVEVVTPILDPEHRAYLKDVVLAAYLRDNVTARILTADGEYKK
                     PTIGVGEEPFNSQLFFEGRNSSPAGGSVHPLKRRLLWARPAQ"
     gene            complement(1285..>1626)
                     /locus_tag="VLM90_08445"
     CDS             complement(1285..>1626)
                     /locus_tag="VLM90_08445"
                     /inference="COORDINATES: protein motif:HMM:NF036527.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13034.1"
                     /translation="IEASERGKQVTAVVEIKARFDEENNLEWATRLAEAGVHVVYGLV
                     NLKTHSKVALVVRREEDGLKTYTHVSTGNYNPTTSRLYTDLGVLTSDPEIGEDATDLF
                     NFLTGFSLQKE"
BASE COUNT          336 a          499 c          454 g          337 t
ORIGIN      
        1 accactccag aatcccgatc gagagcagca caaaaaggct caggataact gccatgtccc
       61 agcggcccac acctgcggcc aaaccgacgc cgagacatac cagcaggacg gtaatttctt
      121 tcgggtcgcg tatgttcgtg cgaaaacgca cgagcgacgc cgccgcgaaa attccgaatg
      181 cgcgcgcggc gctgtcgccg acgaccatca tcatcgccgc cgcgacgacg gccatcagaa
      241 tttgtgtctg accgacgtaa ggattgcgtc ggctgttggc cacaccgcga cgcggcctga
      301 acgccagaat tgccgccagc agcgcggcca gcgagaaccg cagggttacc gtcgcagccg
      361 tggtttgcca actgccggaa gttgccggat gcacatcggg attgtcttgc ccaaacaagt
      421 cgccgaaaat tgagccgcca ccggtctttt gagtttgagg cgaaggcgac ggacttgtcg
      481 tcgcgcctga gccaacgcca gcgttggagg tcaccgcggc gttatcgagc tttgtttgat
      541 ggcgcagcac gtaagacagc ccgccgctaa tcagcaagat cgcggtgaac gtccccagca
      601 ctaccagcgt aagcctgttc atgtcttaat cccttcgttt cgagcgatgg cgcgctgaag
      661 acaagttcac tgcgcaggcc tcgcccacaa gagacgccgc ttcagcggat gaacactccc
      721 gcccgccggc gagctgttgc gaccttcaaa aaacagttgg ctgttgaatg gttcttcgcc
      781 aacaccaatt gtcggtttct tgtactctcc gtcggcagtc aaaatacgcg ccgtgacgtt
      841 gtcgcgcagg tacgcggcca gcacgacatc tttcaaatag gccctgtgtt ccggatcgag
      901 tatcggcgtc acgacctcga cgcgacgatc catgtttcgc gccatccagt cggccgagcc
      961 gatgtaaacc tcgtcttctc cgccgttggc aaagtgaaag atacggctgt gttcaagaaa
     1021 gcggccgaca atgctgcgga cgtggacgga ttgggataga ccgctaactc caggccgcaa
     1081 catgcatgag ccacgtacaa tcagatcgat tttcacgccc gcttgcgacg cgcgataaag
     1141 cgcatcgatc gtgtcgaggt cggtcaggcg attaattttg gcggtaatgc ccgccggacg
     1201 tccggcttcg gcattgttcg tctcgcgctc gattagcttg agcatgcgac cgcgcaggtt
     1261 aaccggcgcg atcatcagcc gcttttattc tttctggagc gaaaaacccg tcagaaagtt
     1321 gaacaggtcg gttgcgtcct cgccgatctc tggatcgctc gtcaggacac ccaggtcggt
     1381 gtaaagccgc gacgtcgttg gattgtaatt ccccgtcgag acgtgcgtgt acgtctttag
     1441 accgtcttct tcgcgccgca cgaccagcgc aaccttactg tgcgtcttta gattaaccag
     1501 accgtaaacg acgtgcacgc cggcttccgc caggcgtgtc gcccattcga gattgttctc
     1561 ttcgtcgaaa cgcgccttga tttctacaac ggcggtgact tgcttgccgc gctcgctcgc
     1621 ctcgat
//
LOCUS       DATIRS010000672         1596 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1328489, whole genome shotgun sequence.
ACCESSION   DATIRS010000672 DATIRS010000000
VERSION     DATIRS010000672.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1596
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1328489"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..253)
                     /locus_tag="VLM90_08450"
     CDS             complement(<1..253)
                     /locus_tag="VLM90_08450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13035.1"
                     /translation="MKPYLALAIVMLLTGWFVLPASAQPLQKLRVGYPSISSRQAQLW
                     VAKDEGLFKKYGLDVELIFLRGGQVAIQALTGGDPPLMTV"
     gene            602..1552
                     /locus_tag="VLM90_08455"
     CDS             602..1552
                     /locus_tag="VLM90_08455"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13036.1"
                     /translation="MWLKLSILALVLLGYTAPALSQLKKVRFSVAAPSIAEMPFRIAQ
                     TKGFYRDEGLDVEVIFIRGAIGMQALLGGSVDFTSASGSTIAAAVRGIPVKLVFTASA
                     KPQFDMVALKEIRSIAELKGKFVGISSRGGAVDLLTQLMVQKHGLTPNKDVTSLVVGG
                     QEDTVLALRTGRIAAALLTPPRPLMLAREGFNRIGYSGDYMPTYPSGGIGVTDDTIKN
                     KPNELYAFVKASVRGLQFARQNRAEGKKILTDYFAIKDAALADQFFELYLSRLPVNGS
                     ADEAWMKGAIEFTQKSLVDAAKEAAPHQVFDFSFVNKAAR"
BASE COUNT          349 a          495 c          441 g          311 t
ORIGIN      
        1 cgacggtcat gagcggcgga tcgccgccgg tcaacgcctg gatcgccacc tgcccgccgc
       61 gcagaaaaat cagctcgaca tcgagaccat attttttaaa caatccctca tccttggcga
      121 cccaaagctg cgcctggcgc gaactgatcg acggatagcc gacccggagc ttttgcagcg
      181 gctgcgccga ggcaggcagc acaaaccaac cagtaagcaa cataacgatc gccagcgcca
      241 agtaaggttt cataaggtta ctcagatgta tgccatcgac aataaaccgt caaatgagcg
      301 caacctgata cagcggagcc gcaagcgaac tcaggatatt tcgcgcaaag cacgccaagg
      361 acgcaaagtt cagatctctg tgtaggggca tattgcatac gccctcccgc atagcgaagg
      421 atgagatcgg tttttacccc gacggaccaa agcgcacgaa gtcttcgtag gggcgggttt
      481 gcaacccgcc ctcccctccg accctttcgt gggtttcatg cctttcctgg tcaagactcg
      541 gaggaatttc tagtcgcgcc attagttgac agcctcacgc cgcccatgtt tactgccggt
      601 catgtggctc aaactatcga ttctcgcact cgtccttctg ggttacaccg cgccggcgtt
      661 aagccaattg aaaaaggttc gcttctcggt ggcggcgccg tccatcgccg agatgccgtt
      721 ccgcatcgcc cagaccaaag gcttctatcg cgacgaagga ctcgatgtcg aggtgatttt
      781 catccgcggc gccatcggca tgcaggcatt gctcggcggc tcggtggatt tcacttctgc
      841 ttcgggctcg accatcgccg ccgcggtgcg cggcatcccg gtcaagctgg ttttcacggc
      901 gtcggccaaa ccgcaattcg acatggtcgc gctgaaagaa attcgctcca tcgccgaact
      961 caaaggcaag ttcgtcggca tctcgtcgcg cggcggcgcc gtcgatctgt tgacgcaact
     1021 gatggtgcaa aagcatggct tgacaccaaa caaagatgtc accagcctgg tcgtcggcgg
     1081 ccaggaggac accgtgctgg cgctgcgcac cgggcgcatc gccgcggcat tgttgacgcc
     1141 gccgcgcccg ctcatgttgg cgcgcgaagg cttcaaccgc atcggctact ccggcgacta
     1201 catgcccacc tacccgagcg gcggcatcgg cgtcaccgac gacaccatca agaacaagcc
     1261 caatgagctg tacgccttcg tcaaagccag tgtgcgcggc ttgcagttcg cccgccaaaa
     1321 ccgcgccgag ggaaaaaaga ttctaaccga ctacttcgcc atcaaagacg cggcgctcgc
     1381 cgaccagttt ttcgagctgt acctgagccg cttgccggtg aacggctcgg ccgacgaggc
     1441 ctggatgaag ggagccatcg aatttaccca gaagagcttg gtcgacgccg ccaaggaagc
     1501 cgcgccgcat caggttttcg attttagttt tgtcaacaag gcagcgcgat aggcagtgga
     1561 tcagttttac aaagatcatg taggggctac tcttat
//
LOCUS       DATIRS010000673         1667 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1722544, whole genome shotgun sequence.
ACCESSION   DATIRS010000673 DATIRS010000000
VERSION     DATIRS010000673.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1667)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1667)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1667
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1722544"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..661
                     /locus_tag="VLM90_08460"
     CDS             <1..661
                     /locus_tag="VLM90_08460"
                     /inference="COORDINATES: protein motif:HMM:NF014073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HSQ13037.1"
                     /translation="YALEKRVSRYPEKFGTGVIEGVAGPEAANNAATAGSFIPLLSLG
                     IPTSAIMALFMGALMIHGIQPGPLFISKYPEFFWGFIASMYVGNAMLLVLNLPLIGMW
                     VRVLKTPYVILFPLILLFCLIGVYSLNANVTEIIIMLAFGIAGFFMRRAGFEGAPFIL
                     AMVLEPIMETSLRQSLLISRGNFNIFVTRPICAVLIALTAAFLIWPLIRRGNKGARRE
                     A"
     gene            complement(703..>1667)
                     /locus_tag="VLM90_08465"
     CDS             complement(703..>1667)
                     /locus_tag="VLM90_08465"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: protein motif:HMM:NF012585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HSQ13038.1"
                     /translation="SSQVAKTSEGRIRVCHVPKTIDNDLPLPGETPTFGFETARQHGF
                     AIVQNLMEDSRTTQRWYFLVIMGRTAGHLALGVGAAAGATLAVIPEEFPGPVHLEILG
                     DLLEGAILKRRAFWERDDGVALIAEGLLERIPVKELTAIEGVQISHDAYGHLRMAELD
                     LAYILKTLVERRFAARGQNFTVVHKTIGYELRCAPPVAFDCEYVKTLGYGAIEFLLNP
                     DERQARIDGALVCVVDGDVRYLKFTDLMDEKTKKTRVRTVDIHKPAYKVAREYMIRLE
                     REDFTDAKRLEKLAQAASSPSQPCSAEAFQKKFEPVVTDLAGGM"
BASE COUNT          288 a          494 c          512 g          373 t
ORIGIN      
        1 ctatgcgctg gaaaaacgcg tgtcgcgata cccggaaaaa ttcggcaccg gggtcatcga
       61 aggggtcgca gggcccgagg cggccaacaa tgccgccaca gcgggttcgt tcattccact
      121 cttgtccctc ggcattccca cgagcgcaat catggcgctc ttcatgggcg ctctgatgat
      181 ccacggcatc cagcccggcc cgctcttcat cagcaagtat ccggagtttt tttggggctt
      241 catcgccagc atgtacgtcg gtaacgccat gctgctggtg ctaaacttgc cgctcatcgg
      301 catgtgggtg cgcgtgctca agacgcctta cgtgattctc tttccgctga ttcttttgtt
      361 ctgtctgatc ggcgtctaca gcctcaacgc caacgtcacc gagatcatca tcatgctcgc
      421 cttcggcatc gccggcttct tcatgcgccg cgctggcttc gaaggcgcgc cgttcatcct
      481 cgccatggtg ctcgagccga tcatggaaac ttcgctgcgc cagtcgctgc tgatctcccg
      541 cggcaacttc aacatttttg tgacgcggcc aatctgcgcg gtcttgatcg cgctcaccgc
      601 ggcgtttttg atctggccgt tgattcgacg cggcaacaaa ggcgcgaggc gcgaggcttg
      661 aggcgcatac agccgggctg catgaactgg atttcgctct gcctacatac cgccggcaag
      721 gtcggtgacc acgggctcga attttttctg gaacgcctcg gcggagcagg gctgggatgg
      781 actcgatgcg gcctgtgcca acttttccag ccgcttggcg tcagtgaaat cttcgcgctc
      841 caggcggatc atgtattcgc gcgcgacttt gtatgccggt ttgtgaatgt cgacggtgcg
      901 cactctggtc ttcttggttt tttcatccat cagatcggta aatttcaaat agcggacgtc
      961 gccgtcgacg acgcacacca gagcgccgtc gatccttgct tggcgctcgt cgggattcaa
     1021 aagaaattcg atggcgccgt agccgagggt tttcacgtac tcgcagtcga acgctaccgg
     1081 cggcgcgcag cgcagctcgt agccaatggt tttgtgcacg acggtgaaat tttgcccgcg
     1141 cgcggcgaag cgccgttcga ccaaagtttt taggatatag gcgaggtcga gctcggccat
     1201 gcgcagatgg ccgtaggcgt cgtgggagat ctgcacgcct tcgatggcgg tgagctcttt
     1261 caccggtatg cgttcgagca aaccttcggc gattagcgcc acgccgtcat cgcgctccca
     1321 gaacgcgcgg cgcttgagga tcgcgccttc caggagatcg cccaggattt cgagatgaac
     1381 cgggccggga aattcttccg ggatcacggc gagggtcgcg ccggcggcgg cgccgacgcc
     1441 gagggcgaga tggccggcgg tgcgtcccat gatcacgaga aaataccagc gctgcgtggt
     1501 gcgtgagtct tccatcaagt tttgcacgat ggcgaagccg tgctggcgcg cggtttcgaa
     1561 accgaaggtc ggtgtctcgc ccggcagcgg caaatcgttg tcgatggtct tgggcacgtg
     1621 gcagacgcgg atgcgtcctt ccgaagtttt tgccacctgg ctggagg
//
LOCUS       DATIRS010000674         1542 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_541551, whole genome shotgun sequence.
ACCESSION   DATIRS010000674 DATIRS010000000
VERSION     DATIRS010000674.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1542
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_541551"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1542)
                     /locus_tag="VLM90_08470"
     CDS             complement(<1..>1542)
                     /locus_tag="VLM90_08470"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSQ13039.1"
                     /translation="ADLATLAGGFTNVVVSPSLSDGLLLKILGHSGCRAACVQNSTGV
                     GRLLNLKGQLPALSRIFVMEKTDDILPDTLTFKELIERGKRVDTGRLGEILQSVHPDD
                     LATIMYTSGSTGEPKGVMRTQDNLLANITNGGAIAVSKPEELTVIILSLNHLFGRFGF
                     LKSAVTGRTAAIIEAAELDLDLKVVESLGGTAMAVVPRVMERIWNGILDQGENRLLWQ
                     QLERLDQEFLGGGRDDAERGEFARLRTTLKGAVRRALGGRIKYVSYGGAAMPPRIMRF
                     FELIGIPLIGSYGSTECGGVTLCGIGDTRPGSLGKPFSNVQIRIADDSEILVRGPTVM
                     PGYFKNPQATREALDEDGWFHSGDLGVLDADGALRIIGQKKDVFYCADGSNIYPGFIE
                     LQLENESFIRQAVLLGDHRTFIAALIVPDRQRIAAALGRDEDSLSEGDAIAALWTQIE
                     RINGRLEHYEQIRRFAAIKDDFPAAVRSVNVFQKIKIDRQAAAARYPKEIDAIYAPTS
                     EGEIH"
BASE COUNT          325 a          467 c          423 g          327 t
ORIGIN      
        1 caatgaatct ctccttccga cgtcggcgcg tagatggcgt cgatctcttt tgggtaacgt
       61 gccgccgcgg cttggcggtc gattttgatt ttttgaaaaa cgttcacgga acggactgcg
      121 gctggaaaat catctttgat cgcggcgaat ctgcgaatct gctcgtaatg ctcaagccgc
      181 ccgttgatcc gctcgatttg cgtccacaac gccgcgatag catcgccctc cgacaacgaa
      241 tcttcatccc ggcccagcgc ggcggcgatc ctttgccggt ctggaacgat gagtgcagcg
      301 ataaacgtgc gatggtcccc cagcaatacg gcttgccgga tgaaggactc gttttccaat
      361 tgcagctcga tgaagccggg atagatgttc gagccgtcgg cgcagtaaaa aacgtccttt
      421 ttctggccga tgattctaag cgcgccgtcg gcatcgagga cgccgagatc gccgctatga
      481 aaccagccgt cttcgtctaa tgcctcgcgc gtcgcttgcg ggtttttgaa ataacccggc
      541 atcaccgtcg gccctcgaac tagaatctcc gaatcgtctg cgatgcggat ctggacgttg
      601 gaaaaaggtt tgcccaaact gcctggacga gtatcgccga tgccgcagag tgtgacgccg
      661 ccacattccg tcgagccgta ggaaccgatc aacggaatgc cgatcaactc gaaaaatcgc
      721 atgatgcgcg gcggcatggc ggcgccgccg tatgaaacat acttgatccg gccgcccagc
      781 gcacgccgca cggctccttt caaagtcgtt ctgagccgag cgaattcccc gcgctcggca
      841 tcgtcgcgac cgccacctaa gaattcctga tcgagccgtt cgagctgttg ccagagcagg
      901 cggttttccc cctggtcgag aatgccattc cagattcgct ccataacccg cggcaccacg
      961 gccatggccg tgccaccaag cgactccacg actttcagat cgaggtcgag ttccgcagcc
     1021 tcgataatcg ccgcggtcct gccggtgacc gcgctcttga gaaaaccgaa ccggccgaaa
     1081 agatgattga gacttaagat gatgactgtg agttcttccg gcttgctgac ggcgatagcg
     1141 ccgccgttgg taatatttgc aagaagatta tcctgcgtgc gcatcacgcc tttcggctcg
     1201 cccgtcgagc cggaggtgta catgatcgtc gccagatcat cggggtgcac cgactgaaga
     1261 atttcaccca gccgtccggt gtcgactctt ttgcctctct caatcaattc tttgaacgtc
     1321 aacgtgtcag gcaatatgtc gtctgttttt tccatgacaa agatacgcga caatgccggc
     1381 agttgcccct ttagattcag cagccggccg acaccggtgg aattctgcac acaagccgct
     1441 cggcagcccg agtggccaag gatcttgagc aacaagccat cggacaagga cggcgagacc
     1501 acgacgttgg tgaagccgcc cgccagcgtc gccaaatcgg cg
//
LOCUS       DATIRS010000675         1742 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1230829, whole genome shotgun sequence.
ACCESSION   DATIRS010000675 DATIRS010000000
VERSION     DATIRS010000675.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1742)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1742)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1742
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1230829"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..735)
                     /locus_tag="VLM90_08475"
     CDS             complement(<1..735)
                     /locus_tag="VLM90_08475"
                     /inference="COORDINATES: protein motif:HMM:NF025843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HSQ13040.1"
                     /translation="MAEKPNEMLSMQGTISRITYQHPESHYTVARLDEDGGPAVTVLG
                     TLFPVSEGEEIKVTGVWKRHPRYGLQFQIDHWEKIDPATIEGIEKYLGSGLIKGIGPI
                     YAKRLVAAFGLETLRVLSEEPLRILDVDGIGEVRARRVMQAWQEQRGMQDVMVFLQGH
                     GVGTSLALRIYRVFGADTIAQVRENPFALAREVHGIGFLLADRLAHHIGIRGDFPLRV
                     QAGVLHVLREMAERGHCYADLAALKRN"
     gene            954..>1742
                     /locus_tag="VLM90_08480"
     CDS             954..>1742
                     /locus_tag="VLM90_08480"
                     /inference="COORDINATES: protein motif:HMM:NF013741.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM domain-containing protein"
                     /protein_id="HSQ13041.1"
                     /translation="MILGNFWFEAILIFALILANGFFAAAEIAVIATRKSRIDALLEQ
                     GVKAAAALARLKNDPDRFLATVQIGVTVVGSLASAIGGAAAIGYLKPQIETLPVPLIA
                     RWAEVIALLIVVLPISYFSLVLGELVPKSLALRYSEQIACFVGRPIEILSRVSAVFVK
                     ALTASSNAVLRLFGGKEVESVSFISVDEVKLLIREGAAKGIFNETERELIHSVFEFTD
                     TSVKAVMVPRTEIHAIDVNTPFAEVAKSFVESGFSRIPAYEGELD"
BASE COUNT          339 a          532 c          486 g          385 t
ORIGIN      
        1 gttgcgcttg agtgcggcga gatcggcata acaatgacct cgctcggcca tttcgcgcag
       61 cacgtgcaac actccggctt gcacgcgcag cggaaaatca ccgcgaatgc cgatgtgatg
      121 ggcgagacga tcggccaaca aaaagccgat gccgtgcacc tcgcgcgcca gcgcaaaggg
      181 attctcgcgc acctgtgcga tggtgtcggc gccgaagacc cgatagatcc tgagcgccag
      241 cgacgtgccg acaccgtgac cctggagaaa gaccatcacg tcttgcatgc cccgttgttc
      301 ctgccaggcc tgcatgacgc ggcgcgcgcg cacctcgccg atgccgtcga catcgagaat
      361 ccgcaacggc tcttcggata gaactcttaa ggtttccagg ccgaaagccg cgaccagccg
      421 cttcgcgtag atgggaccga tgcctttgat tagccccgac ccgagatatt tctcgatacc
      481 ttcgatggtc gccggatcga ttttttccca gtgatcgatt tggaactgca gaccgtagcg
      541 cggatggcgc ttccacacgc cggtgacttt gatttcttcg ccttccgaaa ctggaaagag
      601 cgttcccaac accgtgactg ccgggccgcc gtcttcgtcg aggcgcgcga cggtatagtg
      661 cgattcgggg tgctggtagg tgatccggct gatcgtcccc tgcatcgata acatttcatt
      721 cggtttttcg gccaagggaa tctcccgccc ggcatcctac gcgaaagctt cagtggcgta
      781 aacgtcggcc cttgcctttt ccgtttggga cgatagaatt ttggccatcc tcaaatgtcc
      841 actctctcta gcacaggctc gagccgctca agcgttgccg cttgctaaaa tttgcattag
      901 cgccgtcatt ttccctcgct gtgccgaccg cggaggaata ggagacgaca tctatgattt
      961 tgggaaattt ttggtttgag gccatcctca tttttgcctt gatcctggcc aacggctttt
     1021 tcgccgccgc cgagatcgcg gttatcgcca cgcggaaaag ccgcatcgac gctctgctcg
     1081 agcaaggcgt caaagcggcg gcggcgctgg cgcggctcaa aaacgacccc gaccgctttc
     1141 tggccaccgt gcagatcggg gttaccgtcg tcggatcgtt ggcgtccgcc atcggcggcg
     1201 ccgcggccat cggctaccta aagccgcaaa tcgaaacctt gccggttccg ctcatcgcgc
     1261 gctgggccga agtgatcgct ttgctcatcg tcgtcttgcc gatctcgtac ttctcattgg
     1321 ttctgggcga gttggtcccg aaatccctcg ccttgcgcta ttccgagcag atcgcctgtt
     1381 tcgttggccg tcccatcgaa atcctgtcgc gtgtcagcgc cgtattcgtc aaagccctga
     1441 cggcatcgag taacgccgtg ctccggctgt tcggcggtaa ggaagtcgaa agcgtcagct
     1501 ttatctccgt cgacgaagtg aaattgttga tccgcgaggg cgccgccaaa ggcatattca
     1561 acgagaccga aagagaattg atccatagcg tctttgaatt caccgacacc tctgtgaaag
     1621 ccgtcatggt gccgcgcacc gagatccatg ccatcgacgt aaacacaccg tttgccgaag
     1681 tagccaagag cttcgtcgaa agcgggtttt ctcgcatacc tgcttatgaa ggcgagctcg
     1741 at
//
LOCUS       DATIRS010000676         2225 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_247123, whole genome shotgun sequence.
ACCESSION   DATIRS010000676 DATIRS010000000
VERSION     DATIRS010000676.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2225
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_247123"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..319)
                     /locus_tag="VLM90_08485"
     CDS             complement(<1..319)
                     /locus_tag="VLM90_08485"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13042.1"
                     /translation="MLSPGLSGAQTPPQKVVVTYSSRSIASIDLFVAQERGYFREEGL
                     DPQLVQVRATAAIAALVSGEVHALGSVGSVIRAIPRGAPVKVLAISLRRPVFWLVSRP
                     ELKT"
     gene            561..2033
                     /locus_tag="VLM90_08490"
     CDS             561..2033
                     /locus_tag="VLM90_08490"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSQ13043.1"
                     /translation="MAKMLIAGELVDSESNETTTIKNPATGEVVDNVPKGTIKDIRRA
                     IDAAKGALKKWSTMAPSKRGAILLAAGHTILQREKELATLLTKEQGKPMRESILEIRR
                     FVHTLDHYGGMAKTMRTSAVMLDTGRHGLVMRKPLGVCGSIVPWNFPVSLMGNKLGPA
                     LLAGNCVVVKPAGTTPLTDLATCEIIDKAIQDAGGPKGVLNCVTGPGSVVGEELLVNP
                     TVRKIGFTGATDTGRRVMQSAAADFKHVTLELGGSDPMIVCDDADIDRAVSAASVGRF
                     FNCGQACLAVKRLYLFDSIADDFIAKLAEKAKKISIGNGLKAGILMGPLHTKEQRQEV
                     EEQVEDSVKRGGKLVFGGKRPTGDEFDKGFYLQPTIVADVDPASRMIQEEVFGPALPI
                     VRVKTLDQAIEQANSSIFGLGSSIWTRDINRAMYGAENIEAGYTWVNSAQIIYDELPF
                     GGVKQSGLGKEHGDEAIEYYTDSKSVVIATDVGGEIVGGE"
BASE COUNT          525 a          665 c          622 g          413 t
ORIGIN      
        1 aagtcttcaa ttctggccgg ctgaccagcc aaaataccgg ccggcgcaaa ctaatcgcca
       61 acactttcac cggcgcaccg cgcggaatcg cccggatcac gctgcccacc gatcccaacg
      121 catggacctc gcccgaaacc agagctgcga tcgccgcggt ggcgcgcact tgcaccagtt
      181 gcggatcgag cccctcttcg cgaaagtagc cgcgctcctg ggcaacaaac aaatcgatcg
      241 acgcaatgct gcggctcgaa taggtcacca ccaccttttg cggcggcgtc tgtgccccgc
      301 taaggcccgg cgacaacaaa gctatgagca caatcaatgg accggcaaat ttcaccatgc
      361 ggcgatattc gcttgcggct cgccgaagtt caagcctgtt agggattagc cagcgcttct
      421 gtgggaaaag ttgtgtatac cgcgattcga gctgtcaaag cgatcccggt cgatcgcccg
      481 cggaacaccg cgaattcttg acttcgccct atgaacatga tttttctcta ggttccgaaa
      541 gaagtctggg agggacccgt atggcaaaaa tgctgatagc cggtgagttg gtggattcgg
      601 aaagcaacga aaccaccacg atcaaaaacc cggcgactgg tgaagtcgtc gataacgttc
      661 ccaaaggaac tattaaagat atccggcgtg ccatcgacgc cgccaaaggc gcgttgaaga
      721 aatggtcgac catggcgccg tccaaacgcg gtgcgatttt gctcgccgcc ggtcacacga
      781 ttcttcaacg ggaaaaagag ctcgccacct tgttgaccaa agagcaaggc aagccgatgc
      841 gcgagtcgat cctggaaatc cgccgcttcg tccacaccct cgatcattac ggcggcatgg
      901 cgaaaaccat gcgcaccagc gcggtcatgc tcgacaccgg ccgccacggc ttggtcatgc
      961 gcaaacccct gggcgtttgc gggtcgattg tcccgtggaa tttcccggtt tcgttaatgg
     1021 gcaacaagct cggtccagcg ctgctcgccg gcaactgcgt cgtcgtcaaa ccagccggca
     1081 ccacgccgct caccgatctg gccacctgcg agatcatcga caaagcgatc caagacgccg
     1141 gcggtcccaa aggggttttg aactgcgtca ccggtcccgg cagcgtggtc ggcgaggaat
     1201 tacttgttaa cccaacggtt agaaagatcg gcttcaccgg cgccaccgac accgggcgcc
     1261 gggtcatgca gtcggccgcc gccgacttca agcatgtaac actggaattg ggcggcagcg
     1321 atccgatgat cgtctgcgac gacgcagata tcgatcgtgc cgtcagcgca gcttcggtgg
     1381 gccgtttctt caactgcggc caggcttgcc tggcggtcaa gcggctttac ctgttcgaca
     1441 gcatcgccga cgatttcatc gccaagctcg ccgagaaagc gaaaaagata agcatcggca
     1501 acgggctcaa ggccggcatt ttaatgggcc cgctgcacac caaagaacaa agacaagaag
     1561 ttgaagagca ggtcgaagac tcggtcaagc gcggtggcaa actggtcttc ggcggcaaac
     1621 gtcccaccgg cgacgagttc gacaagggtt tttacttgca gccgacgata gtcgccgacg
     1681 tcgatccggc ttcgcgcatg atccaagaag aagtcttcgg tccagcgctg ccaatcgtcc
     1741 gggtaaagac tcttgaccaa gccatcgagc aggccaacag ctcgatcttc ggcctcggtt
     1801 cgtcgatctg gacgcgcgat attaaccgcg ccatgtacgg cgcggagaac atcgaagccg
     1861 gttacacctg ggtcaactcg gcgcagatca tctatgacga actgcctttc ggtggcgtta
     1921 agcagagcgg tctgggcaaa gagcatggcg acgaagcgat cgagtactac accgattcga
     1981 aatcggtcgt catcgccacc gatgtcggcg gcgagattgt cggcggcgaa taggccgctg
     2041 cgcggcattc cagattaaat atgccagatt ccaaatctgg aatatgaaat ttggaatttg
     2101 gaattgcctc catgaacgtg gaactgcctg atatctacaa cgccgccacg accttcgtcg
     2161 atgaaaacat cacgcaaggc cgtggcggca aagtcgcgat ctactaccag gatcgaaaga
     2221 tcacc
//
LOCUS       DATIRS010000677         1541 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1624004, whole genome shotgun sequence.
ACCESSION   DATIRS010000677 DATIRS010000000
VERSION     DATIRS010000677.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1541
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1624004"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..721)
                     /locus_tag="VLM90_08495"
     CDS             complement(<1..721)
                     /locus_tag="VLM90_08495"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 family protein"
                     /protein_id="HSQ13044.1"
                     /translation="MSRFGEFSTRYFKQYFDLHPTEAIYYGIEGYDHLLNDYSDKSYK
                     AEKIFVKESLRKLGEISPVELTADEAIDYTLLEGRLTIQSYEHAKEDYRLKQPDTYLP
                     TEAIYILTVRATNNLAGNLLSRLDRTPALIEQGITNLNRKDANPPKLWTENAIEGAKG
                     GISFLDSLAEHPKVQAAAIDANTLAAAIEKAKSAINDFANFLERHLLPRSNASYAVGE
                     EHFNLLLKKKHFLDHDANSLLA"
     gene            complement(791..>1541)
                     /locus_tag="VLM90_08500"
     CDS             complement(791..>1541)
                     /locus_tag="VLM90_08500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13045.1"
                     /translation="LKMTCCAALLFLMPASALAETSGKIPRDVIDYTAAHGGALVLVG
                     LAVPWQMESRLSQEELRAQRTAIASIQNDLLDKLAGKKFKVLRQYQEVPGIALEVGAE
                     ALAELARLPIVTNVLLDRPAGAAMPPPNRNAAPRATAAGLASSEKVPSPLFTRAARDG
                     TVLVLAGLRTPWQHEEGLSEELWALQRNAIHSTQSYLLAELAGTRYKVTRLYGKIPGI
                     ALRVGVDALIVLEKSPAITNVVLDRPAQIRR"
BASE COUNT          276 a          420 c          501 g          344 t
ORIGIN      
        1 aagcgagcag gctgttcgcg tcgtggtcga ggaagtgttt tttcttcagc agcaaattga
       61 aatgctcttc accgacggcg tagctggcgt tgctgcgcgg cagcagatgg cgttcgagaa
      121 agttggcgaa atcattgatc gcgctcttgg ccttttcgat ggcggcagcg agcgtgttcg
      181 cgtctatggc cgcggcttgc actttcggat gctcggccag gctgtcgaga aagctgatgc
      241 cccccttggc gccttcgatg gcgttctcgg tccagagctt gggtggattg gcgtctttac
      301 ggtttaggtt ggtaatgccc tgctcgatca acgccggggt acgatcgagg cggctcagca
      361 agttgccggc gaggttgttg gtcgcccgca ccgtgagaat gtagatcgcc tcggtgggca
      421 agtaagtgtc cggctgtttg agacggtagt cttccttggc gtgctcgtag ctctgtatcg
      481 tcaatcggcc ttcgagcagg gtgtaatcga tggcctcatc ggcagtcaat tccactgggg
      541 aaatttcgcc cagcttgcgc agcgactctt tgacaaaaat tttctcggct ttgtagctct
      601 tgtccgagta atcgttgagc aggtgatcgt aaccttcgat gccgtagtag atcgcctcgg
      661 tgggatggag gtcgaagtat tgtttgaaat agcgggtcga gaattcgccg aacctggaca
      721 tgcagctgga atagcatcta aatcgccggc gcgcaatttt ccaccggcgt gattggctca
      781 ggcgcgtgga ttagcgcctg atttgagcgg gacggtccaa aacgacattg gtgatcgccg
      841 gggatttttc caggacgatc aaggcgtcga cgccgacgcg cagcgcgatg ccgggaatct
      901 tgccgtagag ccgcgtgacc ttatagcggg tgccggccaa ctcggcgagc aggtaactct
      961 gggtgctatg gatggcgttt cgttgcaacg cccatagttc ttcgctcagc ccttcttcat
     1021 gctgccacgg tgtgcgcaag cccgccagca cgagcaccgt gccgtcgcgc gccgctcggg
     1081 taaaaagagg ggacggcact ttttcactgc tcgcgaggcc ggccgcggtg gcgcgcggcg
     1141 cagcattgcg attcggcggc ggcatcgcgg cgccagcggg gcggtcgagc aaaacgttgg
     1201 tgacgatcgg cagtcgcgcc agttccgcca aggcctcggc gccgacttcc aaagcgatgc
     1261 cgggaacctc ctgatactgg cgcaaaactt tgaatttctt gccggccagt ttatccaaga
     1321 ggtcgttttg tatcgaggcg atggcggtgc gctgcgcgcg cagctcctct tggctcaagc
     1381 ggctttccat ctgccatggc acggccaagc cgaccagcac caaggcgccg ccgtgagcgg
     1441 cggtgtaatc gatcacgtcg cggggtattt taccggaggt ctcggccagg gcggatgccg
     1501 gcatgagaaa tagcagggcc gcgcaacaag tcatcttcag c
//
LOCUS       DATIRS010000678         3728 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1526086, whole genome shotgun sequence.
ACCESSION   DATIRS010000678 DATIRS010000000
VERSION     DATIRS010000678.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3728)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3728)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3728
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1526086"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            355..3489
                     /locus_tag="VLM90_08505"
     CDS             355..3489
                     /locus_tag="VLM90_08505"
                     /inference="COORDINATES: protein motif:HMM:NF013106.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HSQ13046.1"
                     /translation="MSGKSIPTELSPTASLAGRLFGFLNFKRLKVWLWWLALLAIAAA
                     AIFVEFQTSLLQSWFFTSTNERLFYSLKDGPSREIIFPRAAAPFDERRGYSKLPLLQS
                     RLQSQGYLINQQVRQSETMLTLLERGISPPYWERPDAGLEIIGADDVPLFRYAQGDFL
                     FAKIDDIPPLLVKTLLFLENRDLDHPATPWQNPVIEWDRTLKAAAYYVAGKLQLPVPV
                     QGGSTLAVQLEKFRHSPHGRTDNPVEKLRQLIGASLKAYQEGPNTRTWRERIIVDYLN
                     TVPLAAAPSYGEIHGLGEGLYAWFGIRLSDAVKDLHAAKPTPAKVRAFKHALALLISV
                     RAPTVYLVDERSSLDEKVSQFTRLMARDGVIDGDFAAQLQDTPIKFSPTAPLTPQPSS
                     GKNKAANAIRVSLLEALGMNNLYDLNRLHLRADSTIDVPLQKRVTDFFDRLSRPEVIK
                     AYGLNGERMLEADDPAKLIYSFLLVEATPNGNFVRVQADTLATALDFNKSVKLELGST
                     AKLRTLTHYLELIAELHKELSGLDPKQLHERGTAASDPLTKWAAETLRADKALALQPF
                     LDNAMERKYSGSPYEAFFTGGGVHHFENFDKQENERKFEVREALRHSNNLTFIRLMRD
                     LVSYHRARLAYNAGDVIDNPDNPTRQQMLKEIADEESRAALRRAYQNYAKQMPDEIVK
                     RLIGSKGSVERRLAVLFFAWRVGTDEDALTAWLEKHEAKTSAAEVSKLFRAYQNPRLT
                     LADHAYLLGIHPLDLWCAGEFRQNAKLSWKVLYAKSGPARQVGSAWLLNSRNQRAQNN
                     RLRIRIEKDAFARMTPYWQRLGFPFKTLVPSYATAIGVSTDRPTALAELAGILVNDGV
                     RRPTTTLTRIHFAGATPYETVLERPLKAGEQVLVPEVARTMRKAMAEVVEQGTARRLN
                     GAFKLADGSVLTVGGKTGSGDNRFETFNRSGGVVSSRATNRTATFVFYIGERYYGVIT
                     AYVQGREAGNYHFTSALPVTLLKLLAPSITAKLDNKKLDEVPPPVGEPPADVTVQPAG
                     AAPTARTEPQPIAP"
     gene            complement(3543..>3728)
                     /locus_tag="VLM90_08510"
     CDS             complement(3543..>3728)
                     /locus_tag="VLM90_08510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13047.1"
                     /translation="RFRIRDTNVFLRRKLLGEIFFFHAAPPLQRIADLLRKTLSTPHQ
                     IPPQSPFPKGDSVIASY"
BASE COUNT          811 a         1154 c         1039 g          724 t
ORIGIN      
        1 gaagaactgg tcgaggccga gccagccggc gaattatctc tcaagggctt tcatcgcctc
       61 gtcgccgcct acaatattgt gcggctcaaa gactagaacg caaaatattt ctttcccgga
      121 ttcggatttt atcccgcaaa ggcgcaaagt gacaggccag agcctgtcat cccgagcgaa
      181 tgcgagcgat ctaagaagga tttctctctc cgttcgaaat gacaatgttc acccttggcg
      241 tctttgcgcc ttggcgggag atacttcttc tccgtatcga tgagccgtag ttaaccggaa
      301 gaatctttac gtataatttt gccaccagta tgttaatatt ggcatcacac ttcgatgagc
      361 ggaaaatcca ttccaaccga gttgtcgccg accgcttccc tggccgggcg gctgttcggg
      421 ttccttaact tcaagcggct aaaagtttgg ctctggtggc tggcgctttt ggcgatcgcc
      481 gccgcggcca ttttcgtcga gttccagacc tcgctgctgc aatcttggtt ttttaccagc
      541 accaacgagc ggctttttta tagcctcaaa gacgggccaa gccgggaaat cattttcccg
      601 cgcgccgccg cgccctttga cgagcgccgc ggctattcta aattgccgct cctccagagc
      661 cggctgcaat cccaaggtta tttgataaac caacaggtgc gccagtccga gaccatgctg
      721 acgctcttgg agcgcggcat ctcgccgccc tattgggaac ggccggatgc cggcttggaa
      781 atcatcggcg ccgacgacgt gccgctgttt cgttacgccc agggcgattt tctcttcgct
      841 aagatcgacg acatcccgcc gcttttggtc aagacgctgt tgttcctgga aaaccgcgat
      901 ctcgaccatc cggcaacccc ctggcagaat ccggtcatcg agtgggaccg gacactcaaa
      961 gcagcggcct attatgtcgc gggtaaactg caactgccgg tgccggtgca aggcggcagc
     1021 accttggcgg tgcaactcga gaaatttcgc cattcgcccc atggccgcac tgacaaccca
     1081 gtggaaaaat tgcgccagct catcggcgcc agcttgaaag cttatcaaga agggcccaac
     1141 acccgcacct ggcgcgaacg gatcatcgtc gattacttga ataccgtgcc gctggccgcg
     1201 gcgcccagtt atggcgaaat tcacggtctg ggcgagggtc tgtacgcgtg gtttggcatc
     1261 cgcttgagcg atgcggtcaa ggacttgcac gccgccaagc cgacgccggc gaaagtgcgc
     1321 gccttcaaac atgccctcgc cttgctgatt tcagtgcgcg cgccgacagt ctacctagtc
     1381 gacgaaaggt cgtccttgga cgagaaagtc agccagttca cgcgcctgat ggcgcgcgac
     1441 ggcgtgatcg acggggattt cgccgctcaa ctgcaagaca cgccgataaa gttttcgccc
     1501 accgcgccgc tgacgccgca gccatcctcc ggtaaaaaca aggcggccaa tgccatccgc
     1561 gtcagcttgt tggaagcgct gggcatgaac aacctttacg atttgaatcg cttgcacctg
     1621 cgcgccgaca gcaccatcga tgtgccgctg caaaagcgcg tcaccgactt cttcgaccgt
     1681 ttgagccggc ccgaggtgat caaagcctat ggtctcaacg gcgagcgcat gctcgaagcc
     1741 gacgacccgg cgaagctgat ctattcattc ctgctggtcg aagcgacgcc caatggcaac
     1801 ttcgtgcgcg tgcaagcgga caccctggcc acggctctgg atttcaacaa aagcgtcaaa
     1861 ctcgaactcg gcagcacagc gaagctgcgc acgctgacgc attacttgga attgatcgcc
     1921 gaactgcaca aagaattgtc gggcctggat ccaaagcagc tgcacgagcg cggcactgcc
     1981 gccagcgatc cattgaccaa atgggcggcg gaaacgttgc gcgccgacaa agcactggcg
     2041 ctgcagccgt tccttgataa cgccatggag cggaaatatt ccggcagccc ctatgaagcg
     2101 tttttcaccg gcggaggggt acaccacttt gagaatttcg acaagcagga aaacgaacgg
     2161 aagttcgaag tgcgcgaggc cctgcgccac tccaacaact tgaccttcat tcgcctcatg
     2221 cgcgacctgg tgagctacca tcgtgcccgg ctcgcttaca acgccggtga cgtgatcgac
     2281 aacccggaca acccgacgcg ccaacagatg ctcaaagaaa tcgccgacga ggaatcccgt
     2341 gccgcgctgc gccgcgccta tcagaactac gccaagcaga tgccggatga gatcgtcaag
     2401 cggctgatcg gcagcaaagg cagcgtcgag cggcgcttgg cggtgctgtt tttcgcctgg
     2461 cgggtcggca ctgacgagga cgccttgact gcttggctgg aaaagcatga ggccaaaacc
     2521 agcgccgccg aggttagcaa attgtttcgc gcctaccaga atccgcgcct gactttagcc
     2581 gatcatgcct atctgctagg catacacccg ctcgatctat ggtgcgccgg cgagtttcgc
     2641 cagaacgcca agctgtcgtg gaaagttctc tatgccaaga gcggcccggc ccggcaggtc
     2701 ggctcggctt ggctgctcaa ctcgcgcaat caacgcgccc aaaacaatcg tctgcgcatc
     2761 cgcatcgaaa aagatgcctt cgcgcgcatg acgccatact ggcagcggct cggtttccca
     2821 ttcaaaaccc tggtgccgag ctatgccacc gccatcggcg tttccaccga ccgaccaacg
     2881 gcattggcgg aattggccgg cattctggtc aacgacggcg tgcgccgccc gaccacgaca
     2941 ctgactagaa ttcatttcgc cggcgcaact ccctacgaga ccgtgctcga acgaccgctg
     3001 aaagccggcg agcaggtgct cgtccccgag gtcgcccgca ccatgcgcaa agccatggcc
     3061 gaagtggtcg aacagggaac cgcgcgccgg ctcaatggcg cgttcaaact tgccgacggc
     3121 agcgtgctca ccgtcggcgg caagaccggc tccggcgaca atcgttttga gaccttcaac
     3181 cgcagcggcg gcgttgtcag ctcgcgcgcc accaaccgca cggcaacttt cgtattttac
     3241 atcggcgagc gttactacgg cgtgatcacc gcctacgtcc aaggacgcga ggccggcaat
     3301 tatcatttta ccagcgcgct gccggtcact ttgctcaaac tgcttgcgcc ctcgatcacg
     3361 gcgaaattag acaacaaaaa actcgacgaa gtaccgccgc cggtggggga acccccagcc
     3421 gatgtcacgg tccagccagc cggcgccgcg ccgaccgcgc ggacggaacc acaacccata
     3481 gctccgtaat ccttatctaa tcatacgaga cagcttgttg gctggacgag gagctgacga
     3541 gcttaatagc tagcgatgac cgaatccccc tttggaaaag gggattgcgg ggggatttga
     3601 tgaggtgtgg agagggtttt tcgcagcaga tcggcaatcc tctgcaacgg tggcgccgca
     3661 tggaagaaaa aaatctcccc taggagtttg cgccgcagaa aaacatttgt gtctctgatt
     3721 cggaagcg
//
LOCUS       DATIRS010000679         2050 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1526228, whole genome shotgun sequence.
ACCESSION   DATIRS010000679 DATIRS010000000
VERSION     DATIRS010000679.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2050)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2050)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2050
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1526228"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..458)
                     /locus_tag="VLM90_08515"
     CDS             complement(<1..458)
                     /locus_tag="VLM90_08515"
                     /inference="COORDINATES: protein motif:HMM:NF024376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhnD/SsuA/transferrin family substrate-binding
                     protein"
                     /protein_id="HSQ13048.1"
                     /translation="MSDKPVLSLAAGYHLRAKALCDGRVRLKSFDLRAIAYENDGLGH
                     DEFMAGKFDAGEFSLAMYLALKSRGASYMAIPVFPNRKFRQSYIFVPEGSPLTDAKEL
                     KGKKVGIPSWLNTAGLWARGVLSDEYGVKPADIHWVMPRKNKVDVTLPAGT"
     gene            complement(491..1435)
                     /locus_tag="VLM90_08520"
     CDS             complement(491..1435)
                     /locus_tag="VLM90_08520"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13049.1"
                     /translation="MDTKRLFSIVAFLGLVSLMVSSARGEERVRVALSVRNVVFLPFY
                     YAKTSKIYDRYGLNVELIQMRSDLQLAGLVSGEIDFTPSVGPAGTAIANSLPIKALAI
                     LYRAPLFSLVSPAGIANAKELEGKKVAVSRIGSESHRYGSLMIESAGADPKKVTFIQT
                     GSTSISLEAIQQGTVNAAVLSPPFTGIMAEKGYKILARSRSLAEAPWLGLVANRQKIE
                     KNPEQVRNMLRSMRDVVALMRRDRAGVISYIEKDFKVTTANATESYEDIMGVTMDNLL
                     LRDDQIQKYLDNSLARGEINKRLTVNEMFDFSLLRSLK"
     gene            complement(1441..>2050)
                     /locus_tag="VLM90_08525"
     CDS             complement(1441..>2050)
                     /locus_tag="VLM90_08525"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF012904.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HSQ13050.1"
                     /translation="GPYYYADRSEYEIIEHLKMVDRAVGMPLLIYNNPRYSGYNIHPQ
                     FMARLVEAVPNIFGAKLAMGSVDEAMAYMKLVKAPFASYALASNLVAAMSGGVAGTIS
                     PPLAVTPEIGVALVRAIDAGDAARALALQKDVIRIHDIFLRLAGPFGRTIYCEAMRLR
                     GFDVKMYPRWPSKPLSREAYDELRDLLTELKIIGAQAQARSA"
BASE COUNT          423 a          628 c          590 g          409 t
ORIGIN      
        1 gttcctgccg gcaatgtcac gtcgactttg tttttgcgcg gcatgaccca gtgaatatcc
       61 gcaggcttga cgccgtactc gtcgctcaaa acaccccgcg cccataatcc cgcggtgttg
      121 agccagctgg gaatgccgac ctttttgccc ttgagctctt tggcatcggt cagcggcgag
      181 ccctcgggca cgaagatata tgactggcga aacttgcgat tgggaaacac cgggattgcc
      241 atataagacg cgccgcggct tttgagcgca aggtacatcg ccagggaaaa ctcgccggcg
      301 tcgaacttgc cggccatgaa ttcgtcatgg cccaggccgt cgttttcgta ggcgatcgcg
      361 cgcaggtcga agcttttcag ccgcacccgg ccgtcgcaca aagccttggc gcgcaggtga
      421 taacccgcgg cgagagaaag aaccggtttg tcagacatgg attatccttt ggcgacaatg
      481 atcgccgtcg ctatttcagg ctgcgcaaga gcgagaaatc gaacatctcg ttcaccgtca
      541 gccgcttgtt gatctcgccg cgcgccagcg aattatcgag atacttttgg atctggtcgt
      601 cgcgcagcag caaattatcc atggtcacgc ccatgatatc ctcgtaggat tcggtggcgt
      661 tggccgtcgt cactttgaaa tccttctcga tatagctgat cacgccggca cggtcgcgtc
      721 gcatcagcgc cacgacatcg cgcatggagc gcagcatgtt gcgcacctgc tcgggattct
      781 tctcgatctt ctggcggttg gcgaccaagc cgagccaggg cgcctccgcc aaggagcggc
      841 tgcgcgcgag aatcttgtag cccttttccg ccattatgcc ggtaaacggc ggactcaaca
      901 ccgccgcgtt caccgtcccc tgctgaatcg cctccagact gatcgaggtg ctgccggttt
      961 gaatgaacgt caccttcttc gggtcggcgc cggcgctttc gatcatcagc gagccgtagc
     1021 gatggctctc cgagccgatg cgcgacaccg cgactttctt gccttccaac tctttcgcgt
     1081 tggcgatgcc cgccgggctg accagggaga acaacggcgc gcggtaaaga atcgccagcg
     1141 ccttgatcgg cagcgaattg gcgatggccg tccccgccgg ccccaccgat ggcgtaaagt
     1201 cgatctcgcc ggataccaag cccgccaact gcaagtcgct gcgcatctga atcagctcga
     1261 cgttgagacc gtagcggtcg taaattttcg aggttttagc gtagtaaaaa ggcagaaaca
     1321 ccacgttgcg caccgacaac gcgacccgca cccgctcctc gccgcgggca gaagaaacca
     1381 taagcgaaac caaaccgaga aatgcgacaa ttgagaaaag acgctttgta tccatgcggc
     1441 ctatgcgctc cttgcctggg cttgcgcgcc gattatcttc agttcggtga gaaggtcgcg
     1501 cagctcgtcg taggcctccc ggctgagcgg cttggacggc cagcgcggat acattttcac
     1561 atcgaagccg cgcagccgca tcgcttcgca ataaatggtc cggccaaacg ggccggcaag
     1621 acggagaaaa atatcgtgaa tgcggatcac atctttttgc agggccaagg cgcgcgcggc
     1681 gtcgccggcg tcgatggcgc ggaccagcgc gacgccgatc tcaggggtca ctgctagagg
     1741 cgggctgatg gtgccggcga caccccccga catggccgcg accaaattgc tcgccagcgc
     1801 ataggacgcg aacggcgctt tgaccagctt catatacgcc atcgcttcat cgacgctgcc
     1861 catcgccagc ttggcgccga aaatattcgg caccgcttcc accaaacgcg ccatgaattg
     1921 cggatggatg ttataaccgg aatagcgcgg gttgttatag atcagcagag gcataccgac
     1981 cgcgcgatcg accattttca aatgctcgat gatctcgtac tcggagcggt cggcgtaata
     2041 gtaaggtccg
//
LOCUS       DATIRS010000680         2270 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_542270, whole genome shotgun sequence.
ACCESSION   DATIRS010000680 DATIRS010000000
VERSION     DATIRS010000680.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2270
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_542270"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..939
                     /locus_tag="VLM90_08530"
     CDS             <1..939
                     /locus_tag="VLM90_08530"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ13051.1"
                     /translation="VVLAEQVGFGAFWKGESNSTDPLVMLSAVASRTKTIKLGTAIYH
                     IYGRSPVTLGIQSATLQDLSGGRLLLSLGVANKAIAGWHGGVFDRPLKRAREYIDIVR
                     KVAAGERVEYEGEVYQTGKRFQLSWKPSHPNLPIYLAGLGPQMTKLVGKIADGVFINM
                     ATPAKVKEIAARVREGAIEAGRDPGKIEIIAKSRVSLNPDKSLARAKLRQVLTFYNIA
                     DHYSDMLRGMGFETEVNAIHEAFQKGGFKAAMGALTDEYMDKLPVVPASDIKEIKEKM
                     KAFEEAGVTRMVIPYVPVTEPVVEDARRFFEAWGKG"
     gene            1063..2076
                     /locus_tag="VLM90_08535"
     CDS             1063..2076
                     /locus_tag="VLM90_08535"
                     /inference="COORDINATES: protein motif:HMM:NF040043.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6282 family protein"
                     /protein_id="HSQ13052.1"
                     /translation="MCDFAADAKAAEELMVGRTLSVARVREFNAKDYFYQMLKDNPEM
                     LKIYPGIENELLDGAIDCHIHAYPDFVHRSQDMIQIAIEASKCGMRAIAFKDHWNISA
                     TSAYLTQRHIDDMIARSELTHRVEVYGGVGMCLGMRPEYVRVGLQYPNFKMIWFPSFT
                     SYGFWRSAGYPDHEGVRLCSEDGKVLPEVKQIMEMAAEKKVGIGFCHTDFEELLPLAK
                     LAKEIGNRATLDHPLLELNKLLLDEMKQLRDLGVYVGTYCQPMIPSLYQPVADPMETI
                     RTIKEIGPDRCIIGSDFGQVLHMDAVDGMRVFLRALLGFGIKPEEVKLMLKDNPAKLM
                     WLD"
BASE COUNT          518 a          618 c          686 g          448 t
ORIGIN      
        1 gtggtgttgg cggagcaggt tggcttcggc gccttctgga agggcgaatc caacagcacc
       61 gacccgctgg tcatgctctc ggccgtggcg agccgcacca agacgatcaa actcggcacg
      121 gcgatttacc atatctatgg ccgcagccct gtgactttgg ggattcagtc ggcgaccttg
      181 caagatctct cgggcgggcg tctgttgctc agtctcggcg tggccaataa ggccatcgcc
      241 ggttggcacg gcggcgtgtt cgatcgaccg ctcaaacgag cgcgcgaata tatcgacatc
      301 gtgcgcaagg tcgctgccgg cgagagggtc gagtacgagg gcgaggtcta ccaaaccggc
      361 aagcgcttcc aactctcttg gaaaccgagc cacccgaacc tgccgatcta tctcgccggt
      421 ctggggccgc agatgaccaa gctcgtcggt aagatcgccg atggtgtgtt catcaacatg
      481 gcgacgccgg cgaaggtcaa agagatcgcc gcgcgcgtgc gcgagggcgc catcgaagcc
      541 gggcgcgacc cgggcaagat cgagatcatc gccaagtcgc gcgtgtcgct caacccggat
      601 aagagtttgg cgcgcgccaa gctgcgccaa gtgctgacgt tttacaacat cgccgatcac
      661 tacagcgaca tgctgcgcgg catgggcttc gagacggaag tcaacgcgat tcacgaagcc
      721 tttcaaaaag gcggcttcaa agcggccatg ggcgcgctga ccgatgaata tatggacaag
      781 cttcccgtcg tccccgcgag cgacatcaaa gagatcaaag aaaagatgaa agccttcgag
      841 gaagcgggcg tcacacggat ggtgattccc tacgtgccgg tgaccgagcc ggtggtcgag
      901 gacgcacggc ggtttttcga ggcgtggggg aaggggtagg cgcggctcgt gatcgtgaaa
      961 cgtgatcgtg aaaagcacga acacgaacac ggacacgaaa ctgaaatgtt aaacgaagcc
     1021 agtcattgat tttcattgaa caggatctag gaggagaaaa agatgtgtga ttttgctgca
     1081 gatgccaagg ccgccgaaga gttgatggtt ggccggactt tgagcgtggc gcgggtgcgc
     1141 gagttcaacg ccaaggatta tttttatcaa atgctgaagg acaatccgga gatgctgaag
     1201 atctatccgg ggatcgagaa cgagctgctc gacggcgcca tcgattgcca tattcatgct
     1261 tatcccgatt tcgtccatcg ctcgcaggac atgattcaga tcgccatcga agcgtccaag
     1321 tgcggcatgc gcgcgatcgc ctttaaagat cactggaaca tcagcgccac ctcggcctat
     1381 ctgacccagc gccatatcga cgacatgatc gcccgcagcg agctgaccca tcgcgtcgag
     1441 gtgtacggcg gcgtcggcat gtgcctcggc atgcggccgg agtacgtccg cgtcggacta
     1501 cagtatccca acttcaaaat gatttggttc ccgtctttta cttcctacgg tttctggcgc
     1561 agcgccggtt acccggacca cgaaggcgtg cggctatgca gcgaggacgg caaggtgctg
     1621 ccggaagtga agcaaattat ggagatggcg gcggagaaaa aagtcggtat cggcttctgc
     1681 cacaccgact tcgaagaact gctgccgctg gcgaaattgg caaaagagat cggcaatcgc
     1741 gcgaccctcg atcatccgct gctcgaattg aacaagcttt tgctcgacga aatgaagcaa
     1801 ctgcgcgacc tcggcgtcta cgtcggcact tactgccagc cgatgatccc aagcttgtac
     1861 cagccggtgg ccgatccgat ggaaaccatt cgcacgatca aagaaatcgg ccccgaccgc
     1921 tgcatcatcg gcagcgactt cggccaggtc ctgcatatgg acgcggtcga cggcatgcgg
     1981 gttttcttgc gcgctttgct agggttcggc atcaagccgg aagaagtgaa gttgatgctg
     2041 aaagacaatc cggcgaagct gatgtggttg gattagaagg cttcatcaag cttcaaaaat
     2101 cagatgcgat gatgaattta tacacgacgc tctaactttc tgcgcatgat ggtaggatcc
     2161 gttcgtgcgt taccctcgaa cgatcgggca cacacctacc gaaggtgcgc aattatttat
     2221 gacgctctgt ataggagacg gtggcggccg tccggcaacg gttttttcat
//
LOCUS       DATIRS010000681         1839 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_936089, whole genome shotgun sequence.
ACCESSION   DATIRS010000681 DATIRS010000000
VERSION     DATIRS010000681.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1839
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_936089"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..695)
                     /locus_tag="VLM90_08540"
     CDS             complement(<1..695)
                     /locus_tag="VLM90_08540"
                     /inference="COORDINATES: protein motif:HMM:NF019850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HSQ13053.1"
                     /translation="MAEILAATGGKVARPGKLARYGEIVTDSKQVKGNSIFVALKGER
                     HDAHRFVGAAVRQGATCVIVHRALPSATGGSATIVRVGDTLRALGDLAHYRRERLAPK
                     VLAITGSNGKTTTKEMAAAILAQATLAGQSLRGRVLKTEGNFNNLVGLPLTLLRLTKR
                     HKIAVVELGTNAPGEIQRLAEIADPDLGVITTVAAAHLAGLKNLSGVAREMGALYRAV
                     RRSGMIAVNLDDP"
     gene            complement(719..>1839)
                     /locus_tag="VLM90_08545"
     CDS             complement(719..>1839)
                     /locus_tag="VLM90_08545"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: protein motif:HMM:NF001126.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HSQ13054.1"
                     /translation="SHHTTPESLDLQELLAEMVRSGVQAVAMEVSSHALAQERVRGLD
                     FDVGVFTNLTRDHLDFHRDMDDYFAAKSRLFNDYLPASVKPHKAAVIYGRDPRGEQLI
                     TACRAQGLAVWSYGDSGEWDVCPVQVSQVAIDVSGIRGEIRAKERRLNIASSLVGSVN
                     LQNILGAVGVGCALGLSDDVIARGIARLAAVPGRLEKIDNGRGVAVLVDYAHTPDALE
                     KALQVARQLTTGSLIAVFGCGGDRDRGKRPLMGEIAARLSDFAILTSDNPRTEEPTAI
                     LADVEAGVRQVGIAKLDAARLPAGKTGKTDTADRRGYYVEADRRAAIRLALALAGAGD
                     TVLIAGKGHEDYQILGQTKFHFDDREVAREAIAARANG"
BASE COUNT          330 a          622 c          551 g          336 t
ORIGIN      
        1 cagggatcgt cgagattgac cgcgatcatg ccgctgcggc gcacggcgcg atagagcgcg
       61 cccatttcgc gcgcgacgcc ggacaagttt tttagacctg ccaaatgggc cgccgccaca
      121 gtcgtgatca cgcccaggtc cgggtcggcg atttccgcta aacgctgaat ctcgccggga
      181 gcattggtgc caagttcgac caccgcgatt ttgtgtctct tggtcaaccg taacagcgtc
      241 agcggcaaac caaccaaatt attgaaattg ccttcggtct tgagcacccg gccgcgtagc
      301 gactggccgg ccaaggtagc ttgcgccaat atcgccgcgg ccatttcctt agtcgtcgtt
      361 ttgccgttgg aaccggtaat cgcaagcacc ttgggcgcca gccgctcgcg ccgataatgc
      421 gccagatcgc cgagcgcccg gagcgtgtcg ccgacccgca cgatcgtcgc cgacccgccg
      481 gtcgcgctgg gcaaggcgcg atggacgatg acgcaggtgg cgccttggcg caccgccgcg
      541 ccgacgaagc gatgggcatc gtggcgctcg cctttgaggg cgacgaaaat cgaattgcct
      601 ttgacctgct tggaatcggt cacaatctcc ccgtagcgcg cgagcttacc gggcctggca
      661 actttgccac cggtcgccgc gagtatttcc gccaaagtcc atctcatgcc tggcaaactt
      721 agccgttggc gcgcgcagcg atcgcttcgc gcgccacctc ccgatcgtcg aaatgaaact
      781 tcgtctggcc taagatctga taatcctcat ggcccttgcc ggcgatcagc acggtgtcgc
      841 ccgcgccggc cagcgccagc gccaagcgga tcgccgcacg ccggtcggct tcgacgtaat
      901 agccgcgccg gtccgccgtg tcggtcttgc cggtcttgcc ggcgggaagc cgcgcggcgt
      961 cgagtttggc gatgccgacc tggcgtacgc cggcttcgac atcggcgagt atcgccgttg
     1021 gctcttccgt gcgcggattg tcggaggtta atatcgcgaa atcgctcagc cgcgcggcga
     1081 tttcgcccat caagggccgc ttgccgcggt cgcgatcgcc gccgcaaccg aacaccgcga
     1141 tcaaactgcc ggtggtcaac tgccgcgcca cttgcagcgc tttttccagg gcatcgggag
     1201 tatgggcgta atcgaccaag acggcgacac cgcgcccgtt gtcgattttt tccaaccgcc
     1261 ctggcacggc tgccaaccgc gcgatgccgc gggcgatcac gtcgtcgctc aatcccaggg
     1321 cgcagccgac cccaacggcg cccaaaatgt tttgcaagtt caccgagccg accagcgacg
     1381 aggcgatgtt tagccggcgc tccttggcgc ggatctcgcc gcggatgccg ctgacatcaa
     1441 tggcaacttg gctaacttgc accggacaga catcccactc gccgctgtcg ccatagctcc
     1501 acaccgccaa gccctgcgcc cggcaggcag tgatcaattg ctcgccgcgc ggatcgcggc
     1561 cgtaaatcac cgctgcctta tggggcttca ccgacgccgg caagtagtcg ttgaacaagc
     1621 ggctcttggc ggcaaaatag tcgtccatgt cgcgatgaaa gtcgagatga tcgcgcgtca
     1681 aattggtaaa cacgccgaca tcgaagtcga ggccgcggac tctttcctgg gccagagcat
     1741 gggatgagac ttccatcgcc accgcctgca ccccgctccg caccatctcc gccagcaact
     1801 cctgcaagtc gagggactcg ggcgtcgtat gatgcgacg
//
LOCUS       DATIRS010000682         1987 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1821467, whole genome shotgun sequence.
ACCESSION   DATIRS010000682 DATIRS010000000
VERSION     DATIRS010000682.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1987)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1987)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1987
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1821467"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(158..>1987)
                     /locus_tag="VLM90_08550"
     CDS             complement(158..>1987)
                     /locus_tag="VLM90_08550"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HSQ13055.1"
                     /translation="GIPASTYFRPGGHEYADSVNSKMSVFWGGNAADTRLVDFHFVLA
                     AQRRGAKIICIDPNRSATAQHADQWISPRPGTDTALALALLNEIIGQDLHDREFLIRH
                     TNAAFLVRRDNGALLRAMDIKRGASSEYRVWDSASDEARTVSAASAPALTGVYQVATD
                     FGATIDCVPSFQLLRNLCAEYSVERAVEITGIPADAIRRLALELANVKPAAIRIGYGV
                     DRWYYADYTARAVANLAIATGNIGIPGGGISVHDGTYAAPLNLRPLRTPGGREAATLD
                     IIGLMQAIENGEPYPVKSLWLSASNMFNQTSANRSRVLREILPKLELLVVVEQFMTDS
                     AALADIVLPACTIFEKNDLIAAMFLQLQRQVVPPEGESKADWDIMAGLAQRMGLGQHF
                     ERQPEDYLREMLDSDDALLKGITLERLQGEDAILLNRPAAPYVGFADLRFKTPSGRIE
                     IYKEELLKHGAGLPYYREPIEASPQNPIYSKYPLTLLFSHSRHRIHSTFANLAKAKQH
                     EPEPLVEISPDDAARRGLSDGQLVRVYNQRGRVELKCRLNADLRPGVVVISEGSWVKD
                     FPKGEPYSLTHEQVSSTSDNYAFFDTLVEIELAGDGREDPRTS"
BASE COUNT          404 a          559 c          606 g          418 t
ORIGIN      
        1 aatccaggtg acggacactg tccttcatac cgttgaataa cggtatgaag gcggataatg
       61 ggcctggatt cccgttgtca cgggaatgac gggataagat gacgccttgg cggggtatac
      121 tctccaactc ccaggtcgct acgttcttgg ttgtgcatca actggtccga ggatcttcgc
      181 gcccatcgcc agccagttcg atttccacca gggtgtcaaa gaaagcatag ttgtccgaag
      241 tcgagctgac ctgttcgtgg gtcaggctgt agggctcgcc tttggggaaa tctttcaccc
      301 aggagccttc cgagatcacc accacgccgg gacggagatc ggcattgagc cggcacttta
      361 gctcgacgcg gccacgctgg ttgtagaccc gcacgagctg gccatcgctc aggccgcggc
      421 gcgctgcgtc gtctggagaa atctcgacca ggggttcggg ttcgtgctgc tttgctttgg
      481 ccagattggc gaaggtcgaa tgaatccgat gacggctgtg ggagaagagt aatgtcagcg
      541 gatacttcga atagattgga ttctggggac tcgcctcgat gggctcgcgg tagtagggca
      601 atcccgcgcc atgtttaagc agttcttcct tataaatttc gatgcgtcct gacggcgtct
      661 taaaccgcaa atcggcgaag ccgacatagg gcgcggccgg gcggttgagc aagatcgcat
      721 cttcgccctg caatcgttcg agagtaatgc ctttgagcaa ggcatcgtca ctatcgagca
      781 tctcgcgcaa ataatcctcc ggttggcgct cgaagtgttg tcccagcccc atgcgctggg
      841 ccaagccggc catgatatcc cagtcagcct tactttcgcc ctccgggggg accacctggc
      901 gttgcagttg gagaaacatc gcggcgatca aatcgttctt ttcaaaaatc gtgcaggcgg
      961 gcaggacgat atcggctaac gccgcgctgt cggtcatgaa ctgctcaacc accaccagca
     1021 gctccaactt gggcaaaatt tcgcgcaaca cccggctgcg attggccgag gtttgattga
     1081 acatatttga agccgagagc cagagcgatt tgaccgggta gggttcgcca ttttcgatgg
     1141 cttgcatcag gccgatgatg tctagggtcg ccgcttcccg gccgccggga gtgcgcaacg
     1201 gccgcaagtt caatggcgca gcgtaggtgc cgtcgtggac gctgatgccg ccgccgggga
     1261 tgccgatgtt gccggtggcg atggctagat tcgcgaccgc gcgggcggtg tagtcggcgt
     1321 agtaccagcg gtcaacgccg tagccaatgc gtatcgccgc cggtttgacg ttggctaatt
     1381 ctaaagccag ccggcgaatg gcgtcagctg gaatgccggt gatttccact gcgcgctcga
     1441 ccgaatattc tgcgcagaga tttcgcagca gctgaaacga cggcacgcag tcgatcgtgg
     1501 cgccgaaatc ggtcgccact tgatacacgc cagttagcgc cggcgcgctt gcggcgctga
     1561 cggtgcgagc ttcatcgctg gctgaatccc aaacccgata ctcagaggac gcgccgcgtt
     1621 tgatgtccat tgcgcgcagc aaagcaccgt tgtcgcgtcg caccaagaat gccgcattgg
     1681 tatggcggat gagaaattcg cgatcatgga gatcctggcc aatgatctcg ttgagcagcg
     1741 cgagtgccag ggcggtatcg gtgcccggcc gcggtgaaat ccactgatcg gcatgctgtg
     1801 ccgtcgcgct gcggttggga tcgatgcaaa taatcttggc gccgcgccgc tgcgccgcca
     1861 ggacaaagtg aaaatccacc agccgggtat cggcagcatt gccgccccag aaaacactca
     1921 ttttcgaatt cactgagtcg gcgtactcat gaccacccgg tctaaaataa gtcgaggctg
     1981 gaattcc
//
LOCUS       DATIRS010000683         2686 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1526545, whole genome shotgun sequence.
ACCESSION   DATIRS010000683 DATIRS010000000
VERSION     DATIRS010000683.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2686)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2686)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2686
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1526545"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1046)
                     /gene="atpD"
                     /locus_tag="VLM90_08555"
     CDS             complement(<1..1046)
                     /gene="atpD"
                     /locus_tag="VLM90_08555"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HSQ13056.1"
                     /translation="MSTGKLTQVLGAVVDVEFSDGALPPIYNALKITNPAISDAQWNL
                     VIEVAQHLGENTVRCIAMDTTEGLVRGMDVLDTGAGISVPVGEETLGRILNVIGEPVD
                     EGGPINAKKTSPIHRSAPEFVDQETKVQALETGIKVVDLLAPYARGGKVGLFGGAGVG
                     KTVILMELINNVAMKHGGYSVFGGVGERTREGNDLWLEMKESGVINKASLVYGQMNEP
                     PGARARVALTALTLAEYFRDDEGRDVLLFLDNIFRFTQANSEVSTLLGRMPSAVGYQP
                     TLSTDLGELQERITTTRKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQIAE
                     LGIYPAVDPLDSTSR"
     gene            complement(1148..2014)
                     /gene="atpG"
                     /locus_tag="VLM90_08560"
     CDS             complement(1148..2014)
                     /gene="atpG"
                     /locus_tag="VLM90_08560"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit gamma"
                     /protein_id="HSQ13057.1"
                     /translation="MATLKVIRKRIGSVRNTQQITKAMKMVSAAKLRRAQEAAVQARP
                     YAEKMTELLKNVAARVAKDAHPLLTPREEKKIQLVLFTSDRGLCGGYNTNMIRAAEAF
                     IRQQTGDRQIELTLVGRKGGDHFRRRGAKIADRYIDILYKAADELAGEIAQKLISRFV
                     GGEVDAVYILYSRFRSALSQVPTLEKLLPVALAESNEVQAQQQTEYLYEPGVEQLLAS
                     LLPRITGVAVQRALLEATASEHGARMTAMESATGNASKMIGSLTLQMNRARQASITRE
                     LLEIVGTAEALK"
     gene            complement(2065..>2686)
                     /locus_tag="VLM90_08565"
     CDS             complement(2065..>2686)
                     /locus_tag="VLM90_08565"
                     /inference="COORDINATES: protein motif:HMM:NF012527.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13058.1"
                     /translation="LLERAAKLSAKLGGGSLTALPFIETQAGDVSAYIPTNVISITDG
                     QIFLESDLFYSGVRPAINVGISVSRVGGNAQIKAMKQVAGTLRLELAQYREMAAFAQF
                     GSNLDAATQKQLNRGARLVELLKQGQYQPLAVEQQVVIIYAGTNGFVDELPIPALKRF
                     EQELFSFISSRHADVFADILQKRELDGDLRGKLNKVLEEFKGVFKA"
BASE COUNT          525 a          821 c          777 g          563 t
ORIGIN      
        1 cgcgaggtcg agtcgagcgg atcgacagcc ggataaatgc ctaactcggc gatctgccgg
       61 gacagaaccg tagtcgcgtc caaatgggcg aaggtggtcg ccggcgccgg atcggtcaag
      121 tcgtcggccg ggacgtaaat cgcctgcacg gaggtaatcg aacctttgcg cgtggtcgtg
      181 atgcgttcct gcaactcgcc caagtcggtc gacaaggtcg gctgataacc gacggcggaa
      241 ggcatgcggc cgagcagggt cgagacttcc gagttcgcct gcgtgaaacg gaaaatgtta
      301 tctaggaaca aaagcacgtc gcggccttcg tcgtcgcgga agtattccgc gagagtcaac
      361 gccgtcaagg cgacgcgggc gcgcgctccg ggcggttcgt tcatctggcc gtaaaccagc
      421 gacgctttgt tgataacccc ggactctttc atttcgagcc agagatcgtt gccttcgcgg
      481 gtacgctcgc cgacaccgcc gaagacggaa tagccgccat gcttcatggc gacgttattg
      541 atcagttcca tcagaatgac ggtcttgccg acgccggcgc caccgaacag acctactttt
      601 ccaccgcgcg catagggcgc cagcaagtcg acgactttga tgccggtttc gagggcttga
      661 actttggtct cttgatcgac gaattcaggt gccgaacggt gaatcggcga ggttttcttg
      721 gcgttgatcg ggccgccttc atcgaccggt tcgccgatga cgttgagaat ccgtcccagc
      781 gtctcttcgc ccaccggcac gctgataccc gcgccggtat cgagcacgtc cataccacgc
      841 accaaccctt cggtggtgtc catggcgata cagcgtacgg tgttttcacc caagtgctgg
      901 gccacttcga taaccaggtt ccactgcgcg tcgctgatcg ccggattggt gatcttgagc
      961 gcattataaa tcggcggcag cgcgccgtcg gaaaactcga catcgacaac cgcacccaaa
     1021 acctgggtga gtttacccgt actcatcgta ttaaaacctc ctggttatat cgtgctcgtg
     1081 actcgtgttc gtgctcgata aaacgccgac cttggggaat acgagcacga gtcacgaaca
     1141 cgtcttatca cttcaatgct tccgccgtgc cgacgatttc caacagctcg cgcgtgatcg
     1201 acgcctggcg cgcccggttc atttgcaggg tcaaagagcc gatcatcttc gaggcgttgc
     1261 cggtggccga ttccatcgcg gtcatgcgcg cgccatgctc gctggcggtc gcttccaaca
     1321 acgcgcgctg cacggcgacg cccgtgatgc gcggtaaaag actggccaag agttgctcga
     1381 ccccaggctc gtataaatac tccgtctgct gttgcgcttg aacttcattg gactcggcca
     1441 gcgccaccgg caggagtttc tccaacgtcg gcacttggga caatgccgag cggaagcggc
     1501 tgtagagaat gtaaaccgca tccacctcgc cgccgacaaa ccggctgatt agtttctgcg
     1561 cgatctcgcc ggccaattcg tccgccgctt tgtagagaat atcgatgtag cggtcggcaa
     1621 tcttggcgcc gcgccggcga aaatggtcgc cgcccttgcg gcccactaag gtcaactcga
     1681 tctgccggtc gcccgtctgc tgccggataa acgcctccgc cgcgcggatc atgttggtgt
     1741 tgtagccgcc gcaaagcccc cgatccgagg tgaatagcac cagctgaatc tttttctcct
     1801 cgcgcggcgt cagcagcgga tgggcatcct tggcgacccg agccgcgaca ttttttagca
     1861 actcggtcat cttctcggcg tagggccggg cttgcaccgc ggcttcctga gcgcgccgca
     1921 gcttggccgc cgagaccatc ttcatggcct tggtgatctg ctgggtgttg cgcaccgagc
     1981 cgatccgttt acgtatgact ttgagtgttg ccatgtctat cgatgtccag gactacggga
     2041 ttagggcgtc agggtgatct gaaactaagc cttgaagacc cctttgaatt cttccagcac
     2101 tttgttgagc ttgccgcgca ggtcgccgtc caactcgcgt ttctgcagaa tgtcggcgaa
     2161 gacatcggca tggcgcgagc tgatgaacga gaaaagttcc tgctcgaagc gcttgagcgc
     2221 agggatcggc agctcgtcga caaagccgtt ggtgccggcg taaatgatca cgacctgctg
     2281 ctccaccgcc agcggctgat attgcccttg tttgagcagc tccaccaagc gcgcgccacg
     2341 gtttaactgc ttttgcgtcg ccgcgtccaa attcgaaccg aactgggcga aagccgccat
     2401 ttcacggtat tgagccaatt ccagccgcag tgtgccggcg acctgcttca tcgccttgat
     2461 ctgcgcgtta ccgccgaccc gggagaccga aataccgacg ttgatcgccg gccggacacc
     2521 ggagtaaaac agatcgcttt ctaaaaagat ctgcccgtcc gtgatcgaaa tcacgttggt
     2581 cggaatgtag gctgaaacgt cgcccgcctg cgtctcgata aatggaagcg ccgtcagcga
     2641 accaccgccc agcttggcac tgagcttcgc cgcgcgctcc agtaac
//
LOCUS       DATIRS010000684         1535 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1329557, whole genome shotgun sequence.
ACCESSION   DATIRS010000684 DATIRS010000000
VERSION     DATIRS010000684.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1535
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1329557"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            100..707
                     /locus_tag="VLM90_08570"
                     /pseudo
     CDS             100..707
                     /locus_tag="VLM90_08570"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
     gene            792..1334
                     /locus_tag="VLM90_08575"
     CDS             792..1334
                     /locus_tag="VLM90_08575"
                     /inference="COORDINATES: protein motif:HMM:NF040249.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13059.1"
                     /translation="MGERFETLNVGCKPYPCCGSNHTSIDALKKILLAHPEVRADNVD
                     KIRIRTTRATKLHVGWPYAPKSMTTAQMNLPFCVAVLLHDRDFFVDQITEKSIRSEAV
                     VKITKKIEVLEDPELEALGDEGRHGVNLEVQLQDGRSYSEKVLHAKGSDKHPMTREEA
                     LQKFRLLASRVLSRARVEQL"
BASE COUNT          332 a          481 c          441 g          281 t
ORIGIN      
        1 gtaacggcgc aggcaagaga aatcgccgcc gtgatctcgc cgacgcggac tctggccgat
       61 tatgtcgcgg cactctcgta caagaaaatc ccccgggagg tgatttcgca catcaagctc
      121 tgcgtcatcg attctctcgg ctgcgcgctt tttggctcga ccctgccatg ggcaagatca
      181 tcacgtcctt cgccaaggag atgggaacag gcaagggcgc gctcatctgg ggcgatggcg
      241 cggcggtgcc gagcaccagc gcgcccctgg ccaacggcac cttgatccac agcttcgaga
      301 tggatgacct gcaccgcgtc ggcgttatcc atcccggcgc ggaagcgatc ccagccgcag
      361 acgctctcgt tcgccgtgtc ggtgatgtta gcggcaagcg gtttattact gccgtcgtcg
      421 caggttatga ggtcggctgc cgcgttgcca tgaccggcgg agcctctcaa ctgcgccgcg
      481 gctttcatcc gagcgccacc tccggcacat tcgccgccgg agcggccgcg gctaaaatgc
      541 ttcagttaaa tccgctcaaa acgctccatg cgttgggcat cgccggcact caagccgcgg
      601 ggctcatggc ggcccagtac gcttcgatgg tcaaacggat gcaccccggc cgctccgctc
      661 aagcgggagt ctatggtgcg ctgctcgccg gcaaaggatt taccggcatc gaggatattc
      721 tcgaagcgcc ctacggcggc ttttgctcga ccttctgcga ccatgccaat ctgtcgcacc
      781 tgactcgaga tctgggcgag cgctttgaga ctctcaacgt cggctgcaag ccttaccctt
      841 gctgcggcag caatcacaca tcgatcgatg cgcttaagaa aattctcctc gctcacccgg
      901 aggttcgcgc cgacaacgtg gacaagatcc gcattcgcac gacccgcgcc accaagctcc
      961 acgtcggttg gccctacgcg cccaagagca tgactacggc gcagatgaat ctgccgttct
     1021 gcgtcgccgt tctgctgcac gaccgcgact ttttcgtcga tcagatcacc gagaagtcca
     1081 ttcgcagcga agcggttgtg aaaataacca aaaaaatcga agtcctcgaa gaccctgagc
     1141 tcgaagcgct gggcgacgaa gggcgtcacg gagtcaatct ggaggtccag ttgcaagacg
     1201 gtcgaagcta tagcgagaaa gtgctccacg cgaagggcag cgacaagcat cccatgacgc
     1261 gggaggaggc gctgcaaaaa ttccgtctgc tggcttcccg cgtcctgtcg cgtgctcgcg
     1321 tcgagcagtt gtaagacact ctgctcaacc tggagaagct cccggacgca agaaaaatcg
     1381 ccaagctcct cacgccgtga aagatcgacg caaaggacga tccgcccgaa gccgtcatcg
     1441 gtacaagcaa aacaacggtg cagaagtagt ctcggaaaga gcagatgtgg attgccgaga
     1501 tggaacaaaa aagtagcccg tcccaaattt acccg
//
LOCUS       DATIRS010000685         4486 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_346436, whole genome shotgun sequence.
ACCESSION   DATIRS010000685 DATIRS010000000
VERSION     DATIRS010000685.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4486)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4486)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4486
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_346436"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(48..935)
                     /gene="htpX"
                     /locus_tag="VLM90_08580"
     CDS             complement(48..935)
                     /gene="htpX"
                     /locus_tag="VLM90_08580"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF002826.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metalloprotease HtpX"
                     /protein_id="HSQ13060.1"
                     /translation="MNGFRTTILLAVLTALVVWIGQMVGGPNGAVIALIFAGAMNFFS
                     YWFSDKIVLKMYGGQQITANDDPELYSLVQELAAKGGLPMPKVYVIPEDAPNAFATGR
                     NPEHAAVAVTQGIRRILNKRELAGVLGHELAHVKNRDILISSIAATLAGAISYMAQMA
                     QFAAIFGGGRSRDDGEGNGGGGIFGLLFMMIVAPIAAMLIQMAVSRSREFMADAGGAK
                     ISGDPLALAGALRKLHMGAQNIPLEVSPATQNATAHMFIVSPLSGGSFASLFSTHPAM
                     EERVARLEAMAKDMSYLRA"
     gene            1105..1974
                     /locus_tag="VLM90_08585"
     CDS             1105..1974
                     /locus_tag="VLM90_08585"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HSQ13061.1"
                     /translation="MRVGVVFPQTEIGADPYYVKDYAQAAEELGFAHILAYDHVVGAN
                     PASRPNWKAPYSHLDMFHEPLVLFGYLAGVTRQIEFCTGIVILPQRQTVLVAKQAAAL
                     DVLSGGRLRFGIGIGWNPVEYEALGEDFKDRGRRCEEQIEVMRQLWTNPTVTFAGRWH
                     KITDAGINPLPVQQPIPIWFGGSDERALRRLARLGDGWFPLVGPDEKCRAMIEKIRDY
                     AKEAGRDPQAIGIEGRISYGQGTPDAWRTDLAAWNTLGATHVSFNTMKAGLQSPSAHI
                     EALRRFANAIAAT"
     gene            complement(2041..3093)
                     /locus_tag="VLM90_08590"
     CDS             complement(2041..3093)
                     /locus_tag="VLM90_08590"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF021535.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HSQ13062.1"
                     /translation="MPVSVLVVLSLSLAALLSACSPVYVLRAAYEEGKILWRRQPIAE
                     YLQKPDVTAETQEKLRTVLAARDYARDVLKLNVGGSYSSYSYVDRPDLTYIVVAAHKT
                     ELRPYTWWFLIVGSVPYKGYFSKADAEAEIEHLKADGYDTNLRTSAAFSTLGWFDDPL
                     LSHLLKYDKVGLTEIVFHELFHNTLYLAGQSAFNESVANFIGHRAAVDFFRAKYGADS
                     VEHKRALQWWSEEREFGAFVAEVVRDLTQLYKSDIPRDAKLRLREEVFSRSKAEWARR
                     IADRPAHRFRGFSQQVLNNAVLLHYVIYLKDFDLFESLYELSGKELPKTIELLQQAAA
                     KGGDPFEAVRQLVKKG"
     gene            complement(3297..4415)
                     /locus_tag="VLM90_08595"
     CDS             complement(3297..4415)
                     /locus_tag="VLM90_08595"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13063.1"
                     /translation="MIIDADGHTHVSNVVFDEYLDAAFRAKRPRYVELDDGRGVYIIE
                     GRVIIKPSGWGPGTPLSIGSRRLEGCQSFGMENIAGRLADLDREGIDVQVIYPNVLMS
                     INSFDDAALASAVAHAYNRWMSDRCAESKGRLRYAAVVALQDPLAAADEVEYAATKLG
                     AVGVMVPGTVGTRTLDHPDLYPFWERVEKLGVGVGIHTVTGMYPTVGADLFDHFFGSK
                     AVAMPLTLTVALVSLIAGGIADLFPKLRFGLLETGCGWLPYWLERLDDLHERGEHEPA
                     IYDGVLRRKLSGKRTKPSDLFTSGRMIVSCEPGEKTLPYVVSCVGDQCIMYASDYPHP
                     DSKWPNTVAPIQKAEMAAVAKQRILGENAARLYKLGSK"
BASE COUNT          977 a         1344 c         1255 g          910 t
ORIGIN      
        1 gaccggccgg tcgcccctac aatcataatc gcaatgcaca acctgcctta tgcgcgcagg
       61 taactcatat ctttcgccat cgcttcgagt cgagcgacac gctcttccat cgccggatgg
      121 gtgctgaaca acgacgcgaa gctgccgccg ctgagcgggc tgacgataaa catatgcgcc
      181 gtagcattct gcgtcgccgg gctcacctcc aacggaatat tctgcgctcc catatgcaac
      241 ttacgcagtg cgccggccaa ggccaagggg tcgccggaaa tcttcgcgcc accggcatcc
      301 gccataaatt cacgcgaacg cgataccgcc atctgaatca acatcgccgc tatcggcgcg
      361 acgatcatca tgaacagcag gccaaaaatg ccgccgccac cgttaccttc accgtcgtca
      421 cggctccgtc cgccgccgaa gatcgcggcg aactgcgcca tctgcgccat ataactgatc
      481 gcgcccgcga gggtcgcggc gatgctgctg atcaagatat cgcgattttt cacatgggcg
      541 agttcgtgac cgagcacgcc ggcaagctcg cgcttgttga gaattcggcg aatcccttgg
      601 gtcaccgcca ccgcggcatg ctccggattg cgcccggtgg caaaagcgtt aggggcatct
      661 tcgggaatca cgtagacttt cggcatgggc aatccgccct tggccgccag ctcctgcacc
      721 aagctataca gttcgggatc gtcgttggcg gtgatctgct gcccgccgta catcttcagg
      781 acgatcttat cgctgaacca atagctgaaa aagttcatgg cgccggcgaa aatcaacgcg
      841 atcaccgcgc cgttgggtcc accgaccatt tggccgatcc acaccactag cgctgtcaat
      901 accgctagga gaattgtggt tcgaaaaccg ttcatatcat ttcctccctt tctgcgaggt
      961 atcctacgga atggatgggt taagtcaagg tacaatttag cacacagaga atgtgcgcat
     1021 ggccaggggt tatttcaagc cctctgtttc aaaattgcta tgaattgacc taatatcgaa
     1081 tagttgccaa ttggagggta tgccatgcga gtcggagtag tgtttccgca aaccgaaatc
     1141 ggcgctgatc catactatgt caaggactac gcccaggccg ccgaagagct gggctttgcc
     1201 catatcctgg cctacgacca tgtggtcggc gccaacccgg cgagccggcc caactggaaa
     1261 gcgccctaca gtcacttaga catgttccac gagccgttgg ttcttttcgg ctacctcgcc
     1321 ggggtgacca ggcaaatcga attttgcacc ggtatcgtca tcctgccgca gcgccaaacc
     1381 gtcttggtcg ccaaacaagc agcggcgctg gatgtcttga gcggcggccg tctgcgcttc
     1441 ggcatcggca tcggctggaa cccggtggaa tatgaagccc tcggcgaaga tttcaaagat
     1501 cgcggccgcc gctgcgaaga gcaaatcgaa gtcatgcgcc agctctggac aaatccgact
     1561 gtgacgttcg caggccgctg gcacaagatc actgacgctg gaattaaccc gctccccgtg
     1621 cagcaaccga taccaatatg gttcggcggt agcgacgagc gcgcgttacg ccggctcgcg
     1681 agactcggtg acggctggtt tccgctcgtc ggacccgatg aaaaatgccg ggcgatgatc
     1741 gaaaagattc gtgattacgc gaaggaagca gggcgcgacc cgcaagcaat cggcatcgaa
     1801 ggccgtatat cctacggcca aggtacaccg gatgcttggc gcacagatct agcagcatgg
     1861 aacacccttg gcgccacgca cgtgagcttc aacaccatga aagcgggact gcaatcgccg
     1921 tcagcgcata tcgaagcgct gcggcgattt gccaatgcaa ttgccgcgac ttagtaaacc
     1981 gagagggcgg gtttaaaccc gcctctccaa ttcagaaacc ttttttgcgt tctttgcggc
     2041 ttagcccttc ttcactaact ggcgcaccgc ttcgaaggga tcgccgcctt ttgccgcggc
     2101 ttgctgcaac agctcgatgg ttttcggcag ctcttttcca gacaattcgt acagcgactc
     2161 gaacaagtcg aaatctttca aataaatgac atagtgcaat agcacagcat tattcaggac
     2221 ttgctggctg aaaccgcgga agcggtgcgc cggccggtcg gcgatacggc gcgcccattc
     2281 ggccttgctg cggctaaaaa cctcttcgcg caggcgcagt ttggcgtcgc gcggtatgtc
     2341 gctcttgtac agctgggtca aatcgcgcac gacttcggcg acaaaggcgc cgaactcgcg
     2401 ttcttcgctc caccattgca gcgcgcgctt atgttcaaca ctgtcggcgc cgtacttggc
     2461 gcgaaaaaaa tccaccgcgg cgcgatggcc gatgaagttg gcaacgcttt cgttgaaagc
     2521 gctctgcccc gccaggtaaa gcgtgttgtg aaatagctcg tgaaaaacaa tctcggtgag
     2581 accgacttta tcgtacttga gcagatgcga tagcagcgga tcgtcgaacc agcccaaggt
     2641 gctgaacgcc gccgaggtgc gcaggttggt gtcgtagccg tcggctttta agtgttcgat
     2701 ttccgcttct gcgtcggctt ttgagaagta acccttgtac ggcacgctgc cgacgatcag
     2761 aaaccaccaa gtgtaaggcc gcagctcggt cttatgcgcg gcaacgacga tataagtcag
     2821 atcgggacga tcgacgtagg agtaactgga ataactgccg ccgacgttga gcttaaggac
     2881 atcgcgcgca tagtcgcgcg cagctagaac ggttctcagc ttctcctggg tctcggccgt
     2941 gacatcgggc ttctggagat actcggcgat cggttggcgc cgccagagaa tttttccctc
     3001 ctcataggcg gcgcgtagaa cgtagacggg cgaacaggcg gaaagcaaag ccgcaagaga
     3061 aagactcaga acgacgagga cactgacagg caagagttta ttcggcgcaa gcacagacga
     3121 aattatacca ctccatcgct aaagaaaaat ctccctgatc cgatacccat ccagcaaccc
     3181 agcggaggac cctcgttaag cggcctttgc catttttagc aggtacgcca tgtcaggcgt
     3241 tggctatttg ctttcgtctt tcgccaactc atccatggtc ggcagcgtat ctttcctcac
     3301 ttactcccca acttatacaa ccgcgccgca ttttccccaa gtatccgctg cttcgccacg
     3361 gcagccatct ccgccttctg gatgggcgcg acggtgttgg gccatttgct atcggggtgg
     3421 ggatagtcgg aggcgtacat gatgcattgg tcgccaacgc aactgacaac ataaggcaag
     3481 gttttttcac caggctcgca ggagacgatc atccggccgg aggtgaaaag atcgctgggc
     3541 ttggttctct ttcccgacaa cttccggcgg agtacgccgt cgtaaatcgc cggctcatgc
     3601 tcgccccgtt cgtgcaggtc gtcgagccgt tcgagccaat agggcagcca gccgcagccg
     3661 gtttccaaca aaccgaagcg caatttggga aacaagtcgg caatgccgcc ggcgatgagc
     3721 gacaccaacg ccaccgtcag tgtcagcggc atagcgacgg ccttggagcc gaagaagtga
     3781 tcgaacaagt ccgcgcccac cgtcggatac atgccggtga ccgtgtggat accgacgccg
     3841 acgccgagtt tctcaactct ttcccaaaac gggtagagat cgggatgatc gagggtgcgg
     3901 gtgccgacag tgcccggcac catgacgccg acggcgccta gtttggtcgc ggcgtattcg
     3961 acttcgtcgg ccgcggcgag cggatcttgc agcgcgacca cagcagcgta gcgcaaccgg
     4021 cctttcgact cggcgcagcg gtccgacatc caccggttgt aagcatgcgc caccgctgac
     4081 gcgagagcgg catcgtcgaa actattgatc gacatcaaga cgttgggata gatcacctga
     4141 acgtcgatgc cttccctgtc gagatcggcc aagcgcccgg cgatattttc catgccgaag
     4201 gactgacaac cctcgagccg gcggctgccg atgctcagcg gcgtccccgg tccccagccc
     4261 gacggtttga tgatcacccg tccttcgatg atgtaaaccc cgcgcccgtc gtccagctcg
     4321 acgtagcgcg gccgcttggc gcgaaacgcc gcgtcgagat attcgtcgaa cacgacattg
     4381 gaaacatgcg tatggccatc ggcatcgatg atcatttttc gctcccttcg gccgctgggt
     4441 ggaaagccgt gaatacttag gagtgaggag cttcagttcc ggactt
//
LOCUS       DATIRS010000686         1599 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_50972, whole genome shotgun sequence.
ACCESSION   DATIRS010000686 DATIRS010000000
VERSION     DATIRS010000686.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50972"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..493
                     /locus_tag="VLM90_08600"
     CDS             <1..493
                     /locus_tag="VLM90_08600"
                     /inference="COORDINATES: protein motif:HMM:NF024491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HSQ13064.1"
                     /translation="VTKDKKIFVYGISDRKVGGIDLQKPDGNVAPVRPAALEKNIPEP
                     FKSEPTGGGGNRMHHKFVVIDFDKPTARVYLGSYNFSAAADTKNGENLLLIRDRRIAV
                     SYVIEALRIFDHYHFRVAQQEAKTARRKLLLAKPPRKPGEEPWWAEDYTDARKIRDRE
                     LFA"
     gene            650..1024
                     /locus_tag="VLM90_08605"
     CDS             650..1024
                     /locus_tag="VLM90_08605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13065.1"
                     /translation="MASLLIVALASIMALYVPARAEEQNTLARWVAASHRTAGNVARD
                     GFRHPLETLAFFAIKENSAVVEILPGSGGYYMEILAPYLKARGRYIAANRDEAAAPQY
                     LADHQKLLAGSTPNRLFTKRSL"
     gene            1021..1452
                     /locus_tag="VLM90_08610"
     CDS             1021..1452
                     /locus_tag="VLM90_08610"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSQ13066.1"
                     /translation="MTKFNADKHEIAPQGSADFVLTFRNLHNWVERDEIDGALRAFHR
                     ALKPGGVLGVVDHRGRTDMSQQAQMKSGYVRQDFAIALIEKAGFKLAGASEVNANPKD
                     TKDHPEGVWTLPPSYRLKDKDRAKYQAIGESDRFTLKFVKQ"
BASE COUNT          361 a          461 c          471 g          306 t
ORIGIN      
        1 ggtaacgaaa gacaaaaaga ttttcgtcta cggcatctca gaccggaagg tcgggggcat
       61 agatctacag aaaccggatg gcaatgtcgc gccggtgcgg cctgcggcgc tcgagaagaa
      121 tattccggaa cccttcaagt ccgagcccac cggcggcggt ggcaaccgca tgcaccataa
      181 attcgtcgtc atcgacttcg acaaaccgac tgctcgggtc tatctgggct cctacaactt
      241 ctccgcggcg gcggacacca agaacggaga aaacttgctg cttatccgcg accgccggat
      301 cgcagtttcc tacgtcatcg aggcgttgcg catcttcgac cactaccact tcagagtggc
      361 tcaacaggaa gccaagacag caaggaggaa gctcttgctt gccaagccgc cgcggaaacc
      421 gggagaagag ccctggtggg ccgaggacta tacagatgct cggaaaatcc gtgaccgcga
      481 gctcttcgcg taggcgatcc gatagctccc gtggttgcca tgttcgtggc gctgttatac
      541 gcaagtaagc gggtcgcgta ggcgggccag gcgtaacata ggatattttt attgaactcg
      601 tgaggatcac atgcaatcat tttcaaagac gaacgggctg gtttgtgcaa tggcgagtct
      661 gcttattgtc gcgctcgcgt cgatcatggc gctctatgtc ccagcgcgcg cagaggagca
      721 aaacacgctt gcgcgttggg tcgcggcgtc tcaccgcaca gccggcaacg tagcacgcga
      781 cggcttccgg catccgcttg agacgcttgc gttcttcgct atcaaggaga acagcgccgt
      841 cgtggaaatc ctcccaggca gcggcggtta ctacatggag attctcgcgc cctatctgaa
      901 agcgcgcggc cgttacatcg ccgcgaaccg agacgaggcg gcggcgccgc agtatcttgc
      961 ggaccatcaa aagctgctgg ccggctcaac gccgaaccgg ctctttacga aaaggtcctt
     1021 gtgacaaaat tcaacgctga taagcacgag atcgcgccgc agggcagcgc cgatttcgtg
     1081 ctcacgttcc gcaacctgca caactgggtc gaacgggatg agatcgatgg cgcgctgcgc
     1141 gctttccacc gagcgctgaa gccgggcggc gtgctcgggg tcgtcgatca tcgcggacgc
     1201 accgacatgt cgcagcaagc gcaaatgaaa tcgggctacg tccgtcagga cttcgccatc
     1261 gcgctgatcg aaaaggccgg cttcaagctg gccggcgctt cggaagtcaa tgccaatccg
     1321 aaggacacga aggaccatcc cgaaggagta tggacactgc cgccgagcta tcgcctgaag
     1381 gacaaagatc gcgccaaata ccaggcgatc ggcgaaagtg accgcttcac gctcaagttt
     1441 gtcaagcagt gagagccgag taggcaccga atttcagcgt cctcgacgtg aacgatgtct
     1501 cgcgttcacc gagccgtttg gattttcgtc gctcatgcac gttgttttcc agcgcgtcaa
     1561 aggaaagcaa ttatttttaa gaggccgtat ggtgcttcg
//
LOCUS       DATIRS010000687         1886 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1035166, whole genome shotgun sequence.
ACCESSION   DATIRS010000687 DATIRS010000000
VERSION     DATIRS010000687.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1886
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1035166"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..398
                     /gene="uppS"
                     /locus_tag="VLM90_08615"
     CDS             <1..398
                     /gene="uppS"
                     /locus_tag="VLM90_08615"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="polyprenyl diphosphate synthase"
                     /protein_id="HSQ13067.1"
                     /translation="LRMTVVLALSYSGRDDIVRMARNLAQQVKTGQCQTEAVDEQWIS
                     SQLDTAWVPDPDLLIRTSGEMRISNFYLWQIAYSELYITPTLWPDFREKEYLQALLDY
                     QRRRRRFGRTDEQLAQNPMAAMGAGGPKS"
     gene            382..1188
                     /locus_tag="VLM90_08620"
     CDS             382..1188
                     /locus_tag="VLM90_08620"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: protein motif:HMM:NF013327.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HSQ13068.1"
                     /translation="MDRNLKARFATAAVGLPLLGWLVGWGAPWLFSLTFFVLTVAALQ
                     EYFAMIWPGEPGRQWRGILFGSAVGLTVMLIPTSASALCLSVLLLLLFASTLWSGGSL
                     AERFNRLGWTLLGGLYIGFLVPHLALLFQIKDGRGWVAFVLVVIMAGDSSAYFIGKHF
                     GKRKLAPELSPSKTVEGAIAYLIGSVVIGVLAMTVLSLPVGIFEIVLLSLVLSVLGQI
                     GDLFESLIKRAFAVKDSGELLPGHGGVLDRLDSLIFPVVFATFYLKVIHP"
     gene            1185..>1886
                     /locus_tag="VLM90_08625"
     CDS             1185..>1886
                     /locus_tag="VLM90_08625"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: protein motif:HMM:NF014700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HSQ13069.1"
                     /translation="MRTIALLGSTGSIGVSTLALVREFPERFEIHGMVAGRNVALLAR
                     QIKEFSPAVVAIERAEDIASLSKLLGKHKVEILSGQAGASAVATAAKVDVVLAAIVGG
                     AGLMPTLQGVLAGKEIALANKEALVMAGELFVKAAKETGVRLLPVDSEHSAIFQCLQG
                     NQRGEVDKLILTASGGPFLRTPLDRLAKVSIKQALKHPNWKMGRKITIDSATMMNKGL
                     EVVEARWEFDMEPGGI"
BASE COUNT          353 a          503 c          573 g          457 t
ORIGIN      
        1 acctgcgcat gaccgtcgtc ctggcactca gttatagcgg ccgcgatgac atcgtgcgta
       61 tggccagaaa cttggcgcag caggtgaaaa ccggccagtg tcagacggag gccgtcgatg
      121 agcagtggat ttcctcccag ctcgacaccg cgtgggtgcc cgatcccgat ctcttgattc
      181 gcactagcgg cgagatgcgt atcagcaatt tttatctctg gcagatcgct tacagcgagc
      241 tttatatcac gccgacactg tggccggatt ttcgtgagaa agaatatctc caagcgctgc
      301 tcgattatca acggcggcgc cgccgttttg gccgtaccga cgaacaactg gcgcaaaacc
      361 cgatggccgc gatgggggcg ggtggaccga aatcttaaag cgcggtttgc caccgccgct
      421 gtcgggctgc cgcttttggg ctggttggtt ggctggggtg cgccatggct tttttcgcta
      481 accttttttg tgctcaccgt tgcagcgttg caagaatact tcgcgatgat ctggcctggc
      541 gaacctgggc ggcagtggcg cggcattctg ttcggtagcg ccgtcggtct gaccgtcatg
      601 ctaattccca cgtctgcttc ggctctctgc ctaagtgtgc tcttgctgct attgttcgcc
      661 agcacgttat ggtccggtgg ctcgcttgcc gagcgcttca accggcttgg ttggacgttg
      721 ttgggcgggt tatacatcgg ttttttggtg ccgcatttgg cgctgttatt tcaaatcaaa
      781 gatggccgtg gctgggtggc ttttgtcctc gttgtcatta tggccggtga ttcctcggct
      841 tatttcatcg gcaaacattt cggcaagcgg aagctggcgc cggagttgag tccgagtaaa
      901 accgtcgaag gcgcgatcgc ctatctgatc ggtagcgttg tcattggcgt gcttgccatg
      961 acggtattat cgttacctgt gggaatattc gaaattgtct tgctctcgct agtcctcagt
     1021 gtcctcggcc agatcggcga tctttttgag tctttgatca agcgcgcgtt cgccgtcaag
     1081 gactccggtg agctattgcc gggccatggc ggagttttgg atcgtctcga tagtttgatt
     1141 ttcccggtag tcttcgcgac attctattta aaggtgattc atccatgaga acaatcgccc
     1201 tgctgggttc caccggatcg atcggtgtta gcaccttggc gctggtccgc gaatttcccg
     1261 agcgcttcga aatccacggc atggtggcag gccgcaatgt ggcgctgctg gcccggcaaa
     1321 taaaagaatt ttccccggcg gtggtggcca ttgagcgcgc ggaagatatc gcctcactga
     1381 gcaagttatt aggcaaacat aaagtcgaaa tcttatctgg ccaggccggg gccagcgccg
     1441 tggccaccgc cgctaaagtc gatgtcgtgt tagcggcgat cgttggcggc gccggcttga
     1501 tgccgacgct gcagggagtt ttagctggca aagaaatcgc cctggccaac aaagaagcgt
     1561 tggtcatggc cggcgagttg ttcgtcaagg cggccaagga aacgggcgtg cggctcttgc
     1621 cggtggatag cgagcacagc gcgatctttc agtgcttgca agggaaccag cgcggcgaag
     1681 tcgacaagct catcttaacc gcttcgggcg gaccgttcct gcgcacaccg ctcgatcgcc
     1741 tggccaaagt ctcgattaag caggcgctca agcatcccaa ctggaaaatg ggccggaaaa
     1801 tcaccatcga ttcggcgacc atgatgaaca aagggttgga agtcgtcgag gcgcgctggg
     1861 aattcgacat ggagcccggc ggtatc
//
LOCUS       DATIRS010000688         4590 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1918952, whole genome shotgun sequence.
ACCESSION   DATIRS010000688 DATIRS010000000
VERSION     DATIRS010000688.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4590)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4590)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4590
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1918952"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            147..1256
                     /gene="tgt"
                     /locus_tag="VLM90_08630"
     CDS             147..1256
                     /gene="tgt"
                     /locus_tag="VLM90_08630"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: protein motif:HMM:TIGR00430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HSQ13070.1"
                     /translation="MVGQFTLLKNDTSTKARLGRLTTPHGVVETPCFMPVGTQGTVKA
                     VLPRDLHELGCQILLGNTYHLYLRPGHERIRQLGGLHRFMNWPGPILTDSGGYQVFSL
                     GAMRKITEDGARFQSHIDGSSHLLTPEKAVEIQEALGSDIAMVLDECIPHDAARSYVR
                     ESTERTIRWAERCMNARHRPEQLLFGIVQGGLFEDLRRSCVDALAAMDFDGFAVGGLG
                     VGEGEEKLNAVGAFTVDLLPEDKPRYLMGVGRPQDIIHAVRAGFDMFDCVIPTRNGRN
                     GTLFTWQGKVSIKRAEFADDPRPLDENCACYSCANFSRAYLRHLFMAGEILSAQLNSL
                     HNLYFYHRLMDKCREAIRDGRPELWAELVKFAEVS"
     gene            1278..1613
                     /gene="yajC"
                     /locus_tag="VLM90_08635"
     CDS             1278..1613
                     /gene="yajC"
                     /locus_tag="VLM90_08635"
                     /inference="COORDINATES: protein motif:HMM:TIGR00739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HSQ13071.1"
                     /translation="MVDFAYAQAAPGAAGPGPLMTIFPFIIILVIMYFMVFRPQQKKQ
                     KEHQEMLNKIKRNDEVMTSGGIYGKVTEIKDQVVTLEVAPNVRIRVNRPQISAVITAD
                     KASAKDGKD"
     gene            1618..3246
                     /gene="secD"
                     /locus_tag="VLM90_08640"
     CDS             1618..3246
                     /gene="secD"
                     /locus_tag="VLM90_08640"
                     /inference="COORDINATES: protein motif:HMM:TIGR01129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HSQ13072.1"
                     /translation="MRRGVLTRVIIFSVLALLSVLFLAPNFLGKKDSTGKTEMPNWWP
                     DFLPSDAIHLGLDLQGGSHLVLEVKLDKAIENHMERLKSDLTTSIRDKGIAGVSVERV
                     EGTQLQIKVATVSVDRVRSILKADFANLSEAKTPQTSATGTDFVMTLNREETRALRDY
                     IVDQSLETIRNRIDQFGVSEPVIQRQGVNNILVQLPGIQDPQRAKDIIGKTALLEFKL
                     VDDNVNPEDAVTSGAPPGRQVLFGQVGKGVAGASPAKVPYVLEARTLMTGEYIKDARV
                     RPGEQLQGPYVELILNDQGGRLFEQITAANVKRRMAIVLDNNVYSAPVIQERIGGGRA
                     SITGSFDIKEARDLSIVLRAGALPAPVEIVEERTVGPSLGRDSITQGLTSFVVGGALV
                     ILFMVAYFKGAGLVADVALVFNVLFMAAILAGFQAVLTLPGIAGIVLTLGMAVDANVL
                     INERIREELRAGRAVRSAIEAGYQNALPAILDSNITTFLSGVILFQFGTGPIKGFAVT
                     LCIGILTTVITAVYLTRIYYDYRIGARRLQSISI"
     gene            3255..4178
                     /gene="secF"
                     /locus_tag="VLM90_08645"
     CDS             3255..4178
                     /gene="secF"
                     /locus_tag="VLM90_08645"
                     /inference="COORDINATES: protein motif:HMM:TIGR00966.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HSQ13073.1"
                     /translation="MEIIKPGSKIPFTRYRKTALIASMAVNLAVLAWLFAKGPNLGVD
                     FAGGTMVQLKFQQRTTIPDIRQALQTIDLGGSTIQEFGQEGAFEFLVRVEKVGLEIAA
                     LGDQMKKALTAKFGADKFEIRRVEFVGPKIGEDLRWRGMVSVIAAMVMMGVYIWVRFA
                     SAFGAKFGLHFGLGAVIALMHDVLVTVGALMLANYEFDLTVVAALLTIVGFSVNDTVV
                     ICDRIRENLRKIRRESLESIINTSLNETLSRTILTTGTALLVLLTLYLLGGAVIRPFA
                     FALLVGFVSGVYSTIFIASPVILLWEKSFRR"
     gene            4317..>4590
                     /locus_tag="VLM90_08650"
     CDS             4317..>4590
                     /locus_tag="VLM90_08650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13074.1"
                     /translation="MPHDLAKRWRLKPSDEATVQRFADELKLSPLIARILSLRGFIDN
                     DATRCYLSSSLRSDLPSPFEMAGMEAAVDRIVAAVTNNEQIGIWGDY"
BASE COUNT          924 a         1269 c         1396 g         1001 t
ORIGIN      
        1 ctcgacctgg taaggcgtgc ttctcgcgaa gcgatcgagc ggcagtatcg attttatagt
       61 tacggcgacg caatgctgat tgtttaggaa ggcatgaggc gcgacgcgtg aggaagattc
      121 tgaactcgcg cctcgcgccg aattatatgg tgggtcagtt cactcttctc aaaaatgaca
      181 cgagcaccaa ggctcgtctc ggtcgcctaa ccacaccgca tggggtggtg gaaacgcctt
      241 gcttcatgcc ggtggggact caggggacgg ttaaggcggt gctgccgcgg gatttgcatg
      301 agttggggtg tcagatcctg ctcggcaata cctaccatct gtacttgcgt cccggtcacg
      361 agcggattcg ccagttgggc gggctacatc gcttcatgaa ttggccgggg ccgatcttga
      421 ccgatagcgg cggttatcag gtgttcagcc tcggcgccat gcgcaagatc accgaggatg
      481 gcgcgcgctt tcaatcgcat atcgacggct cgtcccatct gctgacgccg gagaaggcag
      541 tggagattca ggaagctttg ggcagcgaca ttgcgatggt gttggacgag tgcataccgc
      601 atgacgcggc gcgcagctat gtacgcgagt cgacggagcg gacgatccgc tgggcggagc
      661 gttgcatgaa tgcgcgccat cggccggagc agttgctgtt cggcattgtt cagggcggcc
      721 tgttcgagga cctgcggcgt tcgtgcgtcg acgcgctggc ggccatggac ttcgacgggt
      781 tcgccgtggg cgggcttggg gtcggcgagg gtgaagaaaa gctcaatgcc gtcggcgcgt
      841 tcacggtaga cttattgccc gaggataaac cgcgttactt gatgggcgtc ggccggccgc
      901 aggatatcat tcacgccgtg cgcgctggct tcgatatgtt cgattgcgtg atcccgaccc
      961 gcaacggccg taacggtacg ttgtttacct ggcaaggcaa ggtcagcatc aagcgcgccg
     1021 agtttgccga cgatccgcgc ccgttagacg agaactgcgc ttgctatagc tgcgccaact
     1081 tctcccgcgc ctacctgcgc catctgttca tggccgggga gatcctctcg gcgcagctaa
     1141 attcactgca caatctttac ttttaccatc gcctcatgga taagtgtcgg gaagcgattc
     1201 gcgacgggcg cccggagcta tgggccgagc tcgtcaagtt cgccgaagtt tcataagaaa
     1261 acgcttgggg aggaatcatg gtcgattttg cttacgcgca ggcggcgccg ggcgctgccg
     1321 gaccgggacc gttgatgacg atattcccgt tcatcattat tctcgtcatc atgtatttca
     1381 tggtgtttcg gccgcagcag aagaagcaga aagagcacca ggagatgctc aataagataa
     1441 aaagaaacga cgaggtgatg acctccgggg gaatttacgg taaggtgacc gaaatcaaag
     1501 atcaggtggt gaccctcgaa gttgcgccga acgtgcgtat ccgcgtgaat cgtccgcaga
     1561 tctctgccgt tattaccgcc gacaaggcat cagccaaaga cggaaaggat taatcgaatg
     1621 cgacggggtg ttcttacccg agtgattatc ttctcggttc tagctctgtt gtcggtgctc
     1681 ttcctcgcgc ctaactttct cggcaaaaaa gatagtaccg gcaagaccga aatgcccaac
     1741 tggtggcctg atttcttgcc atcggatgcg attcatctcg gcctcgatct gcaaggcggc
     1801 agccatctgg tgctcgaagt gaagctcgac aaagcgatcg agaatcacat ggagcgtttg
     1861 aagagtgatc tcaccaccag tattcgcgac aagggaattg cgggggtatc ggtggagcgc
     1921 gtcgaaggca cgcagctgca gatcaaggtg gcgaccgtga gcgtcgaccg ggtgcgcagc
     1981 atcctcaagg ccgacttcgc caacttgtcc gaggccaaga cgccgcagac gagcgccacc
     2041 gggaccgatt tcgtcatgac gcttaaccgg gaagagactc gcgcgttgcg tgattatatc
     2101 gtcgatcaat cgctcgagac catccgcaac cgcatcgacc agttcggcgt cagcgagccg
     2161 gtgattcagc gccagggggt caacaatatt ctcgtccaac ttcccggcat acaagatccg
     2221 cagcgggcca aggatatcat cggcaagacc gcgcttttgg agtttaagtt ggtcgacgac
     2281 aacgtcaatc cggaagatgc ggtgacgagc ggcgcgccgc cagggcggca ggtgctcttc
     2341 ggccaggtcg gtaaaggcgt cgccggtgca agcccggcaa aagttcccta tgtcctggaa
     2401 gcgcgcacgc tgatgaccgg cgaatatatc aaagacgcgc gggtgcgtcc cggcgagcag
     2461 ctgcaaggcc cctatgtcga actcattctc aacgaccagg gcgggcggct tttcgaacag
     2521 atcaccgcgg ctaacgtgaa gcggcgcatg gccatcgtgc tcgacaacaa tgtctactcg
     2581 gcgccggtga tccaggagcg catcggcggc ggccgggcct cgatcaccgg cagcttcgac
     2641 atcaaagaag cgcgcgatct atcgatcgtt ctgcgcgccg gcgcgctgcc ggcaccggtg
     2701 gagatcgtcg aagaacgcac cgtcgggcca tcattggggc gcgactcgat cactcagggc
     2761 ctcacttcgt ttgtcgtcgg cggcgcgtta gtgatcctgt tcatggtcgc ttacttcaag
     2821 ggcgccggct tggtcgctga cgtggcgctg gtcttcaacg tcttgttcat ggctgccatc
     2881 ctcgccggtt tccaagctgt attgacgctc ccgggcatcg ctggaattgt cttgaccctc
     2941 ggcatggctg tggatgccaa cgtgctcatc aacgaacgca tacgcgagga actccgcgcg
     3001 ggacgggcag tccgttccgc tatcgaagcc gggtatcaaa atgccttgcc agcgatcttg
     3061 gactccaaca tcacgacgtt tctttcgggg gtgattctct ttcagttcgg caccggcccg
     3121 attaaaggct tcgccgtgac gctgtgcatc ggcatcctga cgaccgtgat cacggcggtc
     3181 tatttgaccc gtatctatta cgactatcgc atcggcgcgc gccgactgca gagcatcagc
     3241 atctaaggga agcaatggaa atcatcaagc ctggcagtaa gatcccgttt actcgttatc
     3301 gaaaaaccgc tctgatcgct tcgatggccg tgaacctggc ggtgctcgcc tggctctttg
     3361 caaaggggcc aaatctgggc gtcgacttcg ccggcggtac gatggtgcag ttgaaatttc
     3421 aacagcggac gacgatcccg gatatccggc aagctttgca gacgatcgat cttggcggca
     3481 gcacaattca agaatttggc caggaaggcg ctttcgaatt tctcgtccgc gtggaaaagg
     3541 tcgggctcga gatcgccgcg ctgggcgatc agatgaaaaa ggcgctaacg gcaaagttcg
     3601 gcgccgataa attcgagatc cgccgcgtcg aatttgtcgg tccgaaaatc ggcgaggatt
     3661 tgcgctggcg cggcatggtt tccgtgatcg ccgccatggt gatgatgggc gtgtatatct
     3721 gggttcgctt cgcctcggcg ttcggtgcga agttcggtct gcatttcggc ctgggcgcgg
     3781 tgatcgcttt gatgcacgac gtgttggtga ccgtcggtgc cttgatgctg gccaactacg
     3841 aattcgatct gaccgtggtc gcggcgttgc tgaccatcgt cggtttctcg gtcaacgaca
     3901 cggtggttat ctgcgatcgg atccgtgaga acttgcgtaa gatccggcgc gaaagtttgg
     3961 aaagtatcat caataccagc ttaaacgaga ctctgagccg gacgatactg accaccggca
     4021 cggcattact agtcttgttg acgctctacc tgctcggcgg cgcggtgatc cggcccttcg
     4081 ccttcgctct tttagtcggc tttgtctccg gcgtctactc gaccatcttc atcgccagcc
     4141 cggtcatcct gctgtgggag aagtcgttta ggagatagca gcgaccaagg aagataaagg
     4201 ttttcaccac gaagacgcga agagcacgaa gttcgaaaca ttaattttcc gaaaccttcg
     4261 tgagcttcgt gccttcgtgg tgcgatcgga ttctcttttt aatctcgtaa ctctccatgc
     4321 cgcatgatct tgccaagcgt tggcgcttga aaccgagcga cgaagcgacg gtccagcgtt
     4381 tcgccgatga acttaaactt tcgccgctga tcgcgcgcat cctgagcttg cgcggcttta
     4441 tcgacaacga cgccacccgg tgctacctgt catcgagttt acgttcggat ctgccgtcgc
     4501 ccttcgagat ggcgggtatg gaggcggcgg tggatcgcat cgtcgctgcc gtgaccaaca
     4561 atgaacagat cggtatctgg ggcgattacg
//
LOCUS       DATIRS010000689         2158 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_51089, whole genome shotgun sequence.
ACCESSION   DATIRS010000689 DATIRS010000000
VERSION     DATIRS010000689.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2158)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2158)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2158
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_51089"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(59..358)
                     /locus_tag="VLM90_08655"
     CDS             complement(59..358)
                     /locus_tag="VLM90_08655"
                     /inference="COORDINATES: protein motif:HMM:NF024979.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone modulator CbpM"
                     /protein_id="HSQ13075.1"
                     /translation="MPRKYLRITEVTKVCGVNVKFVKRLEQEQVISPVVRGNEKFYPR
                     DQVDRVRVAHLLIEEMGVNLEGAEVALNMREQMIAMQRQFNEILRRLLSLRPFLR"
     gene            complement(373..1494)
                     /gene="dnaJ"
                     /locus_tag="VLM90_08660"
     CDS             complement(373..1494)
                     /gene="dnaJ"
                     /locus_tag="VLM90_08660"
                     /inference="COORDINATES: protein motif:HMM:NF008035.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HSQ13076.1"
                     /translation="MADLDYYKILGVEHGASQDDVRKAYRKLARKYHPDLNPGNKEAE
                     SKFKSLSVAYDVLSDEKKRKIYDEFGEAGLAAGFDAEKARTYEQWRQQSARGGGTEAF
                     DTDDLGDLFGGLGGMFRRGPRTQAGPQRGGDIESSMEIDFLDAVRGFQTAITLDRPVS
                     CDTCRGSGTKAGTVPTNCPQCAGSGSVSIAQGPLQFRQACPRCSGSGKLPGEPCTACD
                     GSGRVMRAETIRVTIPPGADPGKRIRLRGKGEAGFRGGPAGDLFITPRIRPHPILTRS
                     GRDLSMDLPITVGEALRGASVEVPTPSGAIMVKISLGAQSGQQLRIKGKGVPAHGQTP
                     AGDLYLRLMVRVPKEDVAQEVIDKIDQAYGESVRQNIRL"
     gene            complement(1691..>2158)
                     /locus_tag="VLM90_08665"
     CDS             complement(1691..>2158)
                     /locus_tag="VLM90_08665"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HSQ13077.1"
                     /translation="GVARAAFFPSLTLGLDTVIAAGFGGPAAAASSIASSLVAPIFTG
                     GRLTGNLENVTARQKELAVQYRQIVLVAFQEVEDALAALKSNNDRALLSRATVAESQN
                     AYDIAKARFDAGAIDFLTLLETQRSWYQAQDNQISINQGQLFAFVQLRKAMGS"
BASE COUNT          415 a          620 c          643 g          480 t
ORIGIN      
        1 ggtaacgaaa aattctatcc ccgcgatcaa gtcgaccgtg tccgcgtcgc ccatctgctc
       61 atcgaagaaa tgggcgtaaa cttagaaggc gccgaaggat ttcattgaac tggcgctgca
      121 tggcgatcat ttgctcgcgc atatttagcg cgacttcggc gccttctaag tttacgccca
      181 tttcttcgat gagcagatgg gcgacgcgga cacggtcgac ttgatcgcgg ggatagaatt
      241 tttcgttacc gcggacgacc ggcgagatga cctgttcctg ttccaggcgt ttgacgaact
      301 tcacgttaac gccgcagact ttcgtcactt cggtaatgcg caaatatttt cgcggcattt
      361 tttattcctc ggttacagcc gaatgttttg acgcacgctt tcgccgtagg cttggtcgat
      421 cttgtcgatc acttcttgag caacatcttc cttaggcacg cgcaccatca gccgcagata
      481 taaatctccg gctggagttt gcccgtgggc gggaactcct ttgcctttga tgcgtaactg
      541 ttggccgctc tgggcaccca gtgaaatttt taccatgatc gctccactgg gcgtcggcac
      601 ctcgacgctg gcgccgcgca gcgcttcgcc gacggtgatc ggcaagtcca tggacaagtc
      661 tcggccggag cgagtgagta tcggatgagg ccggatacgc ggcgtgataa agagatctcc
      721 cgccggtcca ccgcgaaatc ccgcttcgcc ctttccccgc aaacggatac gcttgccggg
      781 atcggcgccg ggtggaatgg tgacccgaat cgtttccgcg cgcatgacgc gaccgctgcc
      841 gtcgcaggcg gtgcatggct caccgggcag ctttccgctg cccgaacagc gcgggcaggc
      901 ctggcgaaac tgcagcggcc cttgggcgat ggatacgctg ccgctgccgg cgcattgggg
      961 acaattggtc ggtactgttc cggctttcgt gcccgaaccg cgacatgtat cgcaggacac
     1021 tggccggtcg agtgtgatgg cggtttgaaa gccgcgcaca gcgtcgagga aatcgatttc
     1081 catgctcgat tcaatatcgc cgccgcgctg tggtccggct tgcgtccgcg ggccgcgccg
     1141 gaacatgccg ccaaggccgc caaaaagatc gcccaagtcg tcggtgtcga acgcctccgt
     1201 gccgccgcca cgcgctgact gctggcgcca ttgctcgtag gtacgcgcct tctcggcatc
     1261 gaagccggcg gccaatccgg cctcgccgaa ttcgtcgtaa atcttgcgtt ttttctcgtc
     1321 gctcaggacg tcgtaggcaa ccgagaggga tttaaatttg ctttctgcct ctttattgcc
     1381 gggattaagg tcgggatgat acttgcgcgc aagtttgcga taggctttgc gcacgtcgtc
     1441 ctgcgaggcg ccgtgttcga cgccgagaat cttatagtaa tcaaggtccg ccattgtaat
     1501 ctacaagata atcatcgagc cgcgacttgc aagagaaata actagcgctt agcagccgga
     1561 tgacagtgcc attcgattac tcaacgcgct aggagtgtca caagctgaaa tttgcatggg
     1621 atcagtttca atctcggcca tgcgagtgtt catcagctcg gccgagaccg ggtcattgat
     1681 ttggtcattt tcacgagccc atcgctttgc gtagctggac gaaggcgaag agctgaccct
     1741 ggttgatcga tatctggttg tcctgtgcct ggtaccaact gcgctgggtt tcgagcaggg
     1801 tcaggaaatc gatggcaccg gcgtcgaagc gcgctttggc gatatcgtag gcattctgcg
     1861 attcggcgac ggtggcgcgc gacagcaagg cgcggtcatt gttacttttg agcgcggcga
     1921 gggcgtcttc gacttcttga aatgccacca gcacgatctg gcgatactgc accgcgagct
     1981 ctttctggcg cgcggtgacg ttctccagat tgccggtaag ccggccgccg gtaaagatcg
     2041 gtgcgaccaa gctcgaagcg atcgatgacg cggcggccgc tggaccgccg aagccggccg
     2101 cgataacagt atccaaaccc aaagtgagtg atgggaagaa cgccgcgcgg gccacgcc
//
LOCUS       DATIRS010000690         1962 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_542859, whole genome shotgun sequence.
ACCESSION   DATIRS010000690 DATIRS010000000
VERSION     DATIRS010000690.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1962)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1962)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1962
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_542859"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(109..423)
                     /locus_tag="VLM90_08670"
     CDS             complement(109..423)
                     /locus_tag="VLM90_08670"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HSQ13078.1"
                     /translation="MNLVISRGKVFLSTTVGPREARSHPYSRSDFVEAGGLMSYGASI
                     PDLMRRAAIYVDTILKGRTPADLPVEQPMKFEFIVNLKTAKQIGLTIPPNVLVRADRV
                     IK"
     gene            complement(341..586)
                     /locus_tag="VLM90_08675"
     CDS             complement(341..586)
                     /locus_tag="VLM90_08675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13079.1"
                     /translation="MNKKIFCIVPCAMLFAMSLSAQAQQPTKIPRVGYLGATSPAATA
                     ARIDAFKQGPREFGYFEGKSILIDYRWAEGSSIASLL"
     gene            816..>1962
                     /locus_tag="VLM90_08680"
     CDS             816..>1962
                     /locus_tag="VLM90_08680"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HSQ13080.1"
                     /translation="MPGALDDIRVIDFTHALNGPFCTMLLGHMGAEIIKIEPPGGDGF
                     RRSWMPPDANVDAYEFLWINVNKKSVVLNLKTPQGVELAKQLIAKADIVVENYHTGQM
                     EKFGLGYEDLKKINPRLIYSCTRGFGESGPYKDYGSTAHTNNSMTGWTHTGWGYNKAP
                     GTKAIGIGDEAAGVSMVCGILAALHAREKTGEGQRIVVSMQEALMGFMISEWHEHFIG
                     IEIGNKPVPAADGFFTLRVPDLSDNRFAKLAKFMGREELVPDARFATEAARKQNRGEL
                     YNLVRAFVATKPRQELWDGLRAIDYFGAPVLSMGEVIEDEHIKERKAFIDRNHPVAGP
                     TKLLAPWIHMSKTPASIRDDAPLLGQHTDDVLGKVLGLSAAQLSALRA"
BASE COUNT          445 a          572 c          553 g          392 t
ORIGIN      
        1 agtcgcaacg cgcggaatgc cgcaggattg aattgtaaga cgccacaggc aattttcaca
       61 ggatttgtta gatggaaaat tcagttcact cttagcatcg ccgcgtgctt atttgatcac
      121 ccgatccgcc cgcaccaaca cattcggcgg tatcgtcagg ccgatctgct tggccgtttt
      181 cagattgacg atgaactcga acttcatcgg ctgttcgact ggcaagtcgg cgggagtccg
      241 ccctttgaga atcgtgtcga cataaatcgc ggcgcgccgc atcaagtcgg gaatgctggc
      301 accatagctc atgagccctc cagcttcgac gaaatcagac ctagagtagg gatgcgatcg
      361 agcttccctc ggcccaacgg tagtcgataa gaatactttt cccctcgaaa taaccaaatt
      421 cacgcggccc ctgcttgaac gcgtcgatgc gtgccgcggt tgccgccggc gaagtagcac
      481 cgaggtatcc gacgcgcggt attttcgttg gctgctgcgc ctgggcagat aagctcatcg
      541 caaagagcat ggcgcatgga acgatacaaa agattttctt attcatgggg tttttaactt
      601 tcgatcgcta acatcgcaca acggtagcca cgctgtcatc tgcctgtcaa gtttttccac
      661 cggtgagcat ggcgaattcg cggtagtgaa aactgttgcc tgcccgccga ttcgtgctat
      721 gttccagcca aattatttcc tagacgagat gacggcagtg ataatttgat cctgccgcct
      781 ttatccttat aaactttttc ccaacggagg ttcccatgcc cggcgcgctt gacgacattc
      841 gcgtaatcga tttcacccat gctttgaacg gccctttctg caccatgctg ctcggccata
      901 tgggcgcgga gattatcaag atcgaaccgc ccggcggcga cggctttcgc cgctcgtgga
      961 tgccgcccga cgccaatgtc gacgcttatg aatttctctg gatcaacgtc aacaagaaga
     1021 gcgtcgtgct gaacctcaag accccgcaag gcgtcgagtt ggccaagcag ctaatcgcga
     1081 aagccgatat cgtggtcgaa aactaccaca ccgggcagat ggagaaattc gggctgggct
     1141 acgaagattt gaaaaagatc aacccgcgcc tcatctactc ttgcacgcgc ggcttcggcg
     1201 agtcggggcc gtacaaagac tacggcagca cggcgcatac caacaacagc atgactgggt
     1261 ggactcacac cggctggggc tacaacaaag cgccgggcac caaggcgatc ggcatcggcg
     1321 atgaagccgc cggggtcagc atggtctgcg gcatcctcgc ggcgctgcac gcgcgcgaga
     1381 agaccggcga agggcagaga atcgtcgtgt cgatgcagga agcgctgatg ggtttcatga
     1441 tcagcgaatg gcacgagcat ttcatcggca tcgagatcgg caacaagccg gtgccggcgg
     1501 cggacggctt ttttacgctg cgcgtgcccg atctaagcga caaccgcttt gccaaactgg
     1561 caaaattcat ggggcgcgaa gagctggtgc cagacgcccg cttcgcgacg gaagcggcgc
     1621 gcaaacaaaa tcgcggcgag ctctacaacc tagtcagagc atttgtcgcc accaaaccgc
     1681 gccaagagct ttgggatggg ctgcgcgcca tcgactactt cggcgcgccg gtgctatcga
     1741 tgggcgaagt catcgaagac gagcatatca aagagcgcaa agccttcatc gacaggaatc
     1801 acccggtcgc cggcccgacc aaactcctgg cgccgtggat tcacatgtcg aagacgccag
     1861 ccagcatccg cgacgacgcc ccgctgctcg gccagcacac cgatgatgtc ttgggaaaag
     1921 tcttgggctt gagcgccgca cagttgagcg ccctgcgcgc gg
//
LOCUS       DATIRS010000691         1643 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_149417, whole genome shotgun sequence.
ACCESSION   DATIRS010000691 DATIRS010000000
VERSION     DATIRS010000691.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1643
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149417"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(148..1173)
                     /locus_tag="VLM90_08685"
     CDS             complement(148..1173)
                     /locus_tag="VLM90_08685"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ13081.1"
                     /translation="MAPIRPIGPIWLALALFASNVTAAELANFYQGKTVRIVVGLAAG
                     GGYDLYARTLARHLGKHIPGNPAVVVENMTGAGSIIAANYLYKIAKPDGLTIGHYLGG
                     IALKQLLGKSGIEFDALRFKYIGVPAQDSFIIGVHKATGITDVNAWIASKQLIKFGGI
                     GPGAGSDDIPKILAATINLPAQVVAGYKGTAETRLAFNNGEVQATSNAWESTKSTWRN
                     ELDSGTLKVVLQATLKSHPELKQIPVAYELAKTDEAKKLMATVLRANSPTVRPFMAPP
                     ATPNDRVQLLRKAFMDTWKDPELVAETKKARLDIDPADGAELEQNIKEIFKLEPSQIA
                     KLKEILK"
     gene            complement(1259..>1643)
                     /locus_tag="VLM90_08690"
     CDS             complement(1259..>1643)
                     /locus_tag="VLM90_08690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13082.1"
                     /translation="TWRKELDSGELIPVLQATIKPHPELTKLPMALNFAKTEEAKKLI
                     STVARVHGPSVRPYVLPPKTPKDRLQILRKAFMDTMKDADFLAEAKKANLDINPDDGA
                     TLESNVKEILKLEPALIAKLKEILK"
BASE COUNT          298 a          431 c          513 g          401 t
ORIGIN      
        1 agcgcgcctg aaaaaaatag cggcgaggct cagcctatcg accttggtgt aagaaatcga
       61 gtgggcgatg aaccggggcg actttgacag cagaattatt ccactggcgc aagatcgagt
      121 ggtgcaacga cggggaacac gcgtctgtca cttgaggatt tctttgagct tggcaatctg
      181 tgacggctcg agcttgaaaa tttctttgat gttttgttcg agctcggcgc cgtcggcggg
      241 atcgatatcg aggcgggcct ttttggtttc ggcgactaac tcgggatcct tccaggtgtc
      301 catgaaagct ttgcgcagga gctgcacgcg gtcattgggc gtggccggcg gcgccatgaa
      361 gggacggacc gtcgggctgt tggcgcgcag caccgtcgcc atcagttttt tcgcttcgtc
      421 ggttttcgcc aactcgtagg cgacggggat ctgtttcaac tcgggatggg acttgagcgt
      481 tgcttgcagc actactttca aggttcccga gtccaattcg ttacgccagg tcgatttagt
      541 cgactcccaa gcgttgctgg tcgcttggac ttcgccgttg ttgaaggcga ggcgggtttc
      601 cgccgtgccc ttgtagccgg cgaccacttg cgccggcagg ttgatggtgg cggcgagaat
      661 ctttgggata tcgtcgctgc cggcgccggg accgatgccg ccgaacttga tcaactgttt
      721 cgaagcgatc caggcattga cgtcggtgat gccggtggct ttgtgcacgc caatgatgaa
      781 actatcctgc gccggcacgc cgatatactt gaatctcagc gcgtcgaatt cgattcctga
      841 tttgcccaac agctgtttca gcgcgatgcc gcccaagtaa tggccgatgg tgaggccatc
      901 gggcttggcg atcttgtaaa gatagttggc ggcgatgatc gagccggcgc cggtcatgtt
      961 ctcgacgacc accgccggat tgccagggat atgtttgccg aggtggcgcg ccagcgtgcg
     1021 ggcgtagaga tcgtagccgc cgccggcggc gaggccgacg acgatgcgga cggttttgcc
     1081 ttggtaaaag ttggctagct cagccgcggt aacgttgctg gcgaaaagcg ccagcgctaa
     1141 ccagatcgga ccgatgggac gaattggggc catgctcgcg tcattcctct ctcatgtttt
     1201 gaacgtcttg atacaactga aatgacgctc ggaacggctc tcctgcctca gctttccgct
     1261 acttcaaaat ctccttcagc ttggcgatca gcgccggctc gagcttcaag atttctttga
     1321 cgttgctttc gagcgtcgcg ccgtcatccg ggttgatgtc aaggttggct ttttttgctt
     1381 cggcgagaaa gtccgcatct ttcatcgtgt ccatgaaggc tttgcggagg atttgcagtc
     1441 gatctttggg cgtcttgggt ggcaagacat aaggacgcac gcttgggcca tgcacgcggg
     1501 cgacggtcga aatcagtttc ttggcttctt cggtcttcgc aaagttgagc gccatcggca
     1561 acttggtcaa ctcgggatgg ggcttgatcg tcgcctgcag cacgggaata agctcgccgg
     1621 aatctagttc cttgcgccaa gtt
//
LOCUS       DATIRS010000692         4342 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1723972, whole genome shotgun sequence.
ACCESSION   DATIRS010000692 DATIRS010000000
VERSION     DATIRS010000692.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4342)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4342
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1723972"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..256)
                     /locus_tag="VLM90_08695"
     CDS             complement(<1..256)
                     /locus_tag="VLM90_08695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13083.1"
                     /translation="MTELMPAAPLLIGALLLPILPRRLRPVLFVLAPALGFGLLTQLS
                     ASAVLTWPLLNYELLISRVDRLSLAFGYVFTLAAFLGAIYG"
     gene            complement(249..488)
                     /locus_tag="VLM90_08700"
     CDS             complement(249..488)
                     /locus_tag="VLM90_08700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13084.1"
                     /translation="MKTRQLIVLAIAFALATAVERISLGTPTADAPWWAHVPGFFALF
                     GFLVCLALAFLSKALGKYWLQRDERYYHRGETRDD"
     gene            complement(485..1975)
                     /locus_tag="VLM90_08705"
     CDS             complement(485..1975)
                     /locus_tag="VLM90_08705"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HSQ13085.1"
                     /translation="MTEDWTLRPLLAVLISLLAALLIVVFRRRPNVRESCTLIAAVGK
                     FAMVFSLLADVNGGHYPHITLFEIVPGVGFALGVDSLGLSFALSASLLWIVTSIYSIG
                     YMRTLAESHQTRYYASFAICLSATIGLAFAANLLTFLIFYEVLTIATYPLVVHKGSAE
                     ALAAGRKYLAYLLSGGGALLLAVAWTHSLAPSLDFKAGGMLPAASAPMTLGLLFFLFV
                     VGVGVKAGLMPLHGWLPSAMVAPTPVSALLHAVAVVKAGVFGLARVVGFVFGGDLLRE
                     IGAVNILATLAGLTIVLASLLAMAQNNLKRRLAYSTVGHLSYIVLGLALVTPEAWLGA
                     LFHIITHAAMKITLFFCAGAIYAKTHLENIDELDGIGRQMPITMGAFGVASLGLAGVP
                     PLGGFVSKWFLAQGTLAAGQPWLLAILLLSGLLNAAYLLPIVVRAFFIPSERFPKFAE
                     ASPLMIVPLVTTALLALALGLFPDAVFHWFTLASDATTSVLAGGVK"
     gene            complement(2081..3556)
                     /locus_tag="VLM90_08710"
     CDS             complement(2081..3556)
                     /locus_tag="VLM90_08710"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monovalent cation/H+ antiporter subunit D family
                     protein"
                     /protein_id="HSQ13086.1"
                     /translation="MNHLAVLIPGPLLFAAFIVPLTGLLHKGLVPAVALLGVGLAAAA
                     SVLGMWTVVHQGTLRYHLGSWAPPLGIEYVLDPLAAFMALVVTVSGLLSLVYFSPALR
                     HEVPDRFVTAHALALVFLAGLFGMIVTGDLFNLFVFLEIASLSAYALVAIGDKQAPVA
                     ALRYLILGSLAGSFYVLGVGFIYFVTGSLNMADVAQRLAPLYQSRAVVAAAILIALAL
                     ALKMALFPFHLWLPDAYTYAPSAVAGLIPPVATKVAAYVMVRVFLGVFQPSFGFDRVA
                     LLPVVSWLAAAGIIYGSVMAIAQSDLRRMLAYSSVSQIAYVGLGLGMGNSLGLIGALL
                     HVVNHAAMKACLFFVAGTVRQRTGQVQISNLTGLGRTMPWSMAAFTIAALSMIGVPPA
                     AGFFSKWYLMLGALELANPWFVTVILLSSLLNAVYFFRVVENIYVKTTTVPGATVGAE
                     APPAMLAPTLITAAAVLVLGLANSVIVTQLLMPIAKSFYGR"
     gene            complement(3553..3918)
                     /locus_tag="VLM90_08715"
     CDS             complement(3553..3918)
                     /locus_tag="VLM90_08715"
                     /inference="COORDINATES: protein motif:HMM:NF005624.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter subunit C"
                     /protein_id="HSQ13087.1"
                     /translation="MALFGNFTYLVTSLLLVIGLYGVIAKRNLIKKLIGLSIFQTAIF
                     LFYIHGAIQPGATVPVWDARWATAAQYINPLPHVLMLTAIVVSVATTGVALALTIAIY
                     RRYGTLDEAVLLDRMKRGS"
     gene            complement(3924..>4342)
                     /locus_tag="VLM90_08720"
     CDS             complement(3924..>4342)
                     /locus_tag="VLM90_08720"
                     /inference="COORDINATES: protein motif:HMM:NF015970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MnhB domain-containing protein"
                     /protein_id="HSQ13088.1"
                     /translation="NTIVDGVARLIVPFVQLFAFYVISHGHYGPGGGFQGGVILAAAL
                     MLLRLTLGEEEEHRFFSPKTASVLASIGILIYFGAGLLPLFFGGAFLDYAKLPIPGMD
                     GADLRALGILIVESGVGLVVWGTLVIIFDYLIGNEA"
BASE COUNT         1151 a         1319 c         1222 g          650 t
ORIGIN      
        1 aaccgtagat cgcgccgaga aaagccgcca gtgtaaaaac gtaaccgaag gcaagactca
       61 agcggtcaac gcgactgatc aagagttcat aattcagcaa cggccatgtc agcaccgcgc
      121 tggccgagag ttgagtgagt agcccgaagc cgagcgccgg cgccaggacg aagagcactg
      181 gccgcaatcg gcgcggcaga atgggcagca gtagagcgcc gatcaagagc ggcgcggcag
      241 gcatgagctc agtcatcgcg cgtctcccca cggtgataat agcgctcgtc acgctgcaac
      301 cagtacttcc ccagtgcctt gcttagaaat gccagggcca agcaaacaag aaatccaaac
      361 agggcaaaaa accccggcac atgggcccac cacggcgcat cggcggttgg ggtgccgagc
      421 gatatccgtt cgacagccgt cgcgagagcg aacgctatgg ccaagacaat cagctgacgc
      481 gttttcattt aactccgccc gccaagacgc tggtcgtagc gtcgctcgcc aaggtaaacc
      541 aatgaaaaac cgcgtcgggg aaaagtccca gcgcgagcgc taacagcgcg gtcgtcacca
      601 acggcacgat catcaacggc gaggcctcgg caaacttggg aaaccgctca gaaggaataa
      661 aaaatgctcg cacgactata ggcaataaat acgccgcgtt gagtaatccg ctgagcagca
      721 ggatcgctaa tagccacggc tggccggcgg cgagcgttcc ttgggccaaa aaccatttgc
      781 tgacgaaacc gccgagcggc ggcacgccag cgagacctaa cgatgccaca ccgaaggcgc
      841 ccatggtgat cggcatctgc cggccgatgc cgtccagctc gtcgatattc tccaagtgcg
      901 tcttggcgta gatcgcacca gcgcagaaaa acagcgtgat cttcatcgcc gcgtgggtga
      961 tgatgtgaaa cagggcgcca agccaagcct ccggggtgac cagagcgaga cccaggacaa
     1021 tgtaggagag gtgaccgacc gtggaataag ccagccggcg cttcaaattg ttctgggcca
     1081 tggcgagcag cgatgcaaga acaattgtta gccccgccag tgtggcgagg atattgaccg
     1141 cgcctatctc tcgcagcaaa tcaccgccaa agacaaaccc gacgacccgc gctaagccaa
     1201 acaccccggc tttgaccacc gccaccgcgt gcaacaacgc gctcaccggc gtcggcgcca
     1261 ccatcgctga cggcaaccag ccatgcagcg gcatcaagcc ggctttgacc ccgacaccga
     1321 cgacgaataa aaaaaacagc aggccaagcg tcatcggcgc gctcgccgcc ggtagcatgc
     1381 cgccggcttt gaagtctagc gacggcgcca aactgtgggt ccaggccacg gctagaagca
     1441 acgcgccgcc gccgctcagc agataggcga gatatttacg ccccgccgcc aatgcttcgg
     1501 cgctaccctt gtgcaccacc agcggatagg tggcgatggt caacacttcg tagaagatca
     1561 gaaaggtcag caaattagcc gcgaaggcga gaccgatggt cgctgataag caaatcgcga
     1621 aactcgcgta gtaacgagtc tgatgcgatt cggccagagt gcgcatgtaa ccgatcgaat
     1681 aaatcgatgt gacaatccac aacagcgacg ccgataatgc gaagctcaag cccaaagaat
     1741 cgacccccaa ggcgaaccca acgccgggga cgatttcgaa gagcgtaatg tgcggatagt
     1801 gaccgccatt cacatcggca agcagggaaa ataccatggc gaatttgccg accgcggcaa
     1861 tcagcgtgca gctctcgcgc acattgggcc gccgcctgaa aaccacgatc aggagcgcgg
     1921 ccaacaacga aatcagcacc gccaagagcg gccgtaatgt ccagtcctct gtcatcttca
     1981 atgccaaata aacgcaacta ccaaagggga tgctctcccc ctttgcaagc ccgatctaat
     2041 tgcgcccgcc ttagctggcg ggagtctttt gcaagagcgg ttaacgcccg taaaaacttt
     2101 tggcgatggg catcaataat tgcgtgacga tcaccgagtt agctaaaccc agaacgagca
     2161 ctgccgccgc cgtgattaac gttggcgcca acatggccgg cggcgcttcg gcgcccactg
     2221 ttgccccagg caccgtcgtt gttttaacgt aaatattttc caccacgcga aaaaaataca
     2281 ccgcgttgag cagactgctg agcaaaataa ccgtcacgaa ccacgggttg gccagttcta
     2341 gcgcgccgag catgagatac catttgctaa aaaagcccgc cgccggtggt acgccgatca
     2401 tcgacagggc ggcgatcgta aacgccgcca tgctccacgg catggtgcgc ccgagtccgg
     2461 taagattaga aatttgcacc tgcccggtgc gctggcgcac cgtgccggcg acgaagaaca
     2521 aacaagcttt catcgccgca tgattgacca catggagcaa cgcaccgatg agtcccaagc
     2581 tattgcccat gccgagccca agcccgacgt aggcgatctg actgacactg ctgtaggcga
     2641 gcatgcggcg caggtcgctt tgggcgatgg ccatcaccga gccgtaaata atccccgcgg
     2701 ccgcgagcca agaaacgacc ggcaacagag cgacgcgatc gaagccaaaa ctcggttgaa
     2761 acaccccaag gaaaacccgc accatgacgt aagcggcgac cttggttgcc accgggggga
     2821 tcagcccggc cacggccgaa ggcgcatagg tgtaagcgtc tggcagccat agatgaaacg
     2881 ggaatagcgc catcttgagc gctaacgcca gcgcgatcaa gatcgccgcg gcgaccaccg
     2941 cgcgggactg gtaaagcggc gccagccgct gcgcaacgtc cgccatattc aaagagccgg
     3001 tgacgaaata gataaagcca accccaagaa cataaaaact gccggccaga ctgccaagaa
     3061 tcagatagcg cagcgccgcc accggtgctt gtttgtcgcc gatggcgacc aaagcgtaag
     3121 ccgataaaga tgcgatttcg agaaaaacga acagattaaa taaatccccg gtgacgatca
     3181 tgccgaagag accggcgagg aataccagag cgagggcgtg ggcggtgaca aagcggtcgg
     3241 gtacctcatg acgcagcgcc gggctaaaat aaaccagcga gaggagcccc gacaccgtta
     3301 cgaccaaggc catgaacgcc gccagcgggt caagcacata ttcaatgccg agcggcggcg
     3361 cccaactgcc caggtggtag cgtagcgtgc cttgatggac aaccgtccac attcccaaga
     3421 ccgacgcggc ggcggccagg ccaacgccga gcaaggccac ggctggcaca agccctttgt
     3481 gaagcaagcc ggtcaacggc acgatgaagg cggcgaatag cagaggcccc ggaatcaaaa
     3541 ccgcaagatg attcacgatc cgcgcttcat cctatccagc aacacggctt catcgagcgt
     3601 gccatagcgg cggtagatcg cgatggtcaa tgccagcgca acgccagtcg tggcgacact
     3661 gacaacgatg gcggtgagca tcaacacatg cggcagggga ttgatatatt gcgccgcggt
     3721 tgcccaacgc gcatcccaaa ccggcaccgt cgctcctggc tggatcgcgc catgaatata
     3781 gaaaagaaaa atcgccgtct gaaaaatgct gagaccgatg agcttcttga tcaagttgcg
     3841 cttggcgatc acgccgtaca gaccgatcac cagcaaaagc gaagtcacga gataagtgaa
     3901 gttgccgaaa agagccatca agtttacgct tcgttgccaa tcaggtagtc aaatataatc
     3961 accagcgtgc cccacaccac caaccccacg ccggattcga cgatgagaat acccaaagcg
     4021 cgcagatcgg cgccatccat gccgggaatc ggcagcttgg catagtcaag aaacgcgccg
     4081 ccgaaaaata gcggcaacag cccggcgccg aagtatatca agatgccgat gctggccaac
     4141 acagaagctg tcttcggcga aaaaaaccgg tgttcctctt cctcgcctag cgtcagccgc
     4201 aggagcatca acgccgccgc caagatcact cctccctgga agccgccgcc ggggccataa
     4261 tggccgtggc taatgacata gaaagcaaag agctgaacga acggcacgat cagccgggca
     4321 acgccgtcga cgatggtgtt at
//
LOCUS       DATIRS010000693         3267 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1527094, whole genome shotgun sequence.
ACCESSION   DATIRS010000693 DATIRS010000000
VERSION     DATIRS010000693.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3267
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1527094"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..600)
                     /locus_tag="VLM90_08725"
     CDS             complement(<1..600)
                     /locus_tag="VLM90_08725"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ13089.1"
                     /translation="MAKTILVTGGAGGICSEISRGLAADGLNVVVADYAKDGAEKVAA
                     GIRDAKGSAIAVQVDVGDPKSVASMMEQAVERYGQVDNIFCGAGVMDRVAIVDMPEEM
                     WDRLMRINLKGVFLCAQAAARHMIPRNEGRILSIASGRGVAGQPRSAHYAASKAGVIA
                     FTKSLAVELAPNNITVNCVCPGATDTPMSRIGFSEEQFKK"
     gene            complement(672..2015)
                     /locus_tag="VLM90_08730"
     CDS             complement(672..2015)
                     /locus_tag="VLM90_08730"
                     /inference="COORDINATES: protein motif:HMM:TIGR00797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HSQ13090.1"
                     /translation="MTDSRQPSHRSDLREILVLAIPAMLAQASLPLLNIGETAMIGRL
                     SAEALAARAVGAALIGTVYWLFAFLTFGTTSLIGHHYGAGDSKACGETYLHALFVALT
                     GGLFIACAGALFAEPLYQLMGAEAAVAAQGANYFRIYIASAPFTLTIYCSVGFYRGIQ
                     NTTVPMVMAFAITAIQLTLDYGLIYGRLGLPALGLTGAAVAAWCAQLIGAMTYFGLFF
                     YSPRTAVYCAIPWRITSAGLRPLFRIGQDLAIRTGALRLSLIFATSTAARMGTATLSA
                     YEIVFQLFMLCSDVIDGLAIAGQALVAKYLGSGEKARAYRMGVTLTLCGITAGLLFAV
                     SFAIAWATIVEFFTTSVEVIALLTPGATILVCLIQPLNGAVFVLDGLLIGARDTRYLM
                     WAMVGGAMIMIPLAWSARQFDLGLPGILLAIAALMAWRAATNVSRFVNQAWMRGR"
     gene            complement(2409..>3267)
                     /locus_tag="VLM90_08735"
     CDS             complement(2409..>3267)
                     /locus_tag="VLM90_08735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_263046608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cobalamin-binding protein"
                     /protein_id="HSQ13091.1"
                     /translation="GLGDDLVGVTHECDYPADAQNKPTIVKSVIDAKRMSGAEIDRKV
                     AELLQAGKGLYCIDEAAFADAAPDVILTQGLCEVCALDYDEVVKAAGKLLRPPAIVSL
                     NPHSMQEILDDIRRVGAATGRSNAVMALVDNLRQRIERVGGREPDRRPRVVCLEWFEP
                     LYSAGHWVPEMIALAGGHDVLGRAGEPSAKLDWREVVDAQPEVILLMPCGFDVRRAVK
                     ESTPLRALPGWKDLPAVRAERVFALNGNAYFSRPGPRLVNGLEILARIIHPDTVEWSL
                     GPADAARIN"
BASE COUNT          658 a          969 c         1027 g          613 t
ORIGIN      
        1 tttcttgaac tgctcttcgc tgaagccgat gcgcgacatc ggtgtatccg ttgcaccggg
       61 acagacgcag ttgaccgtga tgttgttcgg cgccaactcg acggcgaggg atttggtgaa
      121 agcgattacc ccggccttgg atgcggcgta atgtgccgag cgcggttgcc cggcgacgcc
      181 gcggcccgat gcgatgctga gaatgcggcc ttcgttgcgg ggaatcatgt gcctggcggc
      241 cgcctgggcg cacagaaaca cgcccttcaa gttaatccgc atcagccggt cccacatctc
      301 ttccggcata tcgacgatcg ccacccgatc catgaccccg gcgccgcaaa agatgttatc
      361 gacctgaccg tatctctcca ctgcttgctc catcatggac gctacgctct tgggatcgcc
      421 gacatcgacc tggacggcga tggcgctgcc tttggcatcg cgaatcccag cggcgacttt
      481 ctccgccccg tctttggcgt agtccgcgac gacgacgttt agtccatcgg ctgccaggcc
      541 gcgggaaatt tccgaacaga tgccaccggc gccgccggtg actagaatcg tttttgccat
      601 gattcgtctc ccttttgtct atgaataagt ttggcgaagc tatcaccgcg gttcgtccgc
      661 gtcaactttt gttagcggcc gcgcatccag gcttgattta cgaagcggct cacattggtc
      721 gcggcgcgcc aggccatgag cgcggcgatg gcgagcaata ttcccggtag tcccaagtca
      781 aattgccgcg ccgaccaggc gagcggtatc atgatcatgg cgccgccgac catggcccac
      841 atgaggtagc gggtgtcgcg ggcgccgatc agtaggccgt cgaggacaaa gacggcgccg
      901 ttgagaggtt ggatgagaca aaccaggatc gtcgcgcctg gcgttagcag cgcgatgact
      961 tcgacgctgg tggtaaaaaa ctcaacgatt gtcgcccacg cgatggcgaa gctcactgcg
     1021 aacagcagac cggcggtgat gccgcagagc gtcagcgtca cgcccatgcg gtatgcgcgc
     1081 gccttctctc ccgatcccaa gtatttggcg accagcgctt ggccggcgat ggccaggcca
     1141 tcgatgacgt cggagcagag catgaacagc tgaaagacga tttcataggc ggatagggtc
     1201 gccgtgccca tgcgcgccgc ggtgctggtg gcgaagatca gcgagaggcg caatgcgccg
     1261 gtgcggatgg cgagatcttg gccaatgcgg aacagcggcc gcaggccggc gctggtgatg
     1321 cgccacggga tcgcgcagta gacggcggtc cgtggtgagt aaaagaatag tccgaagtaa
     1381 gtcatcgcgc cgataagttg cgcacaccag gcggccaccg cggctccggt caggcccagg
     1441 gccggcaggc ccaatcgacc gtagatcagt ccgtagtcga gagtgagttg tatggcggta
     1501 atggcaaacg ccatcaccat cggcactgtg gtgttctgaa tgccgcgata aaacccgacc
     1561 gagcagtaga tcgtcaatgt gaacggcgca ctagcaatgt aaatgcgaaa ataattcgcg
     1621 ccctgcgcgg ccacggcggc ctctgcgccc atcaactggt agagcggctc ggcaaacagg
     1681 gcgccggcgc atgcgatgaa taggccgccg gtgagcgcga caaacagcgc gtgaagataa
     1741 gtttcgccgc aggccttgct atccccggcg ccataatgat gcccgatgag actggtagtg
     1801 ccgaaggtga ggaaagcgaa aagccaatag accgtgccga taagcgccgc gccaacggca
     1861 cgggcggcca atgcctcggc actcaatctg ccgatcatgg cggtctcgcc gatattcaac
     1921 aacggcagac tcgcttgcgc gagcatcgcc ggaatcgcca ggacgaggat ttcgcgcagg
     1981 tcggagcggt gtgagggttg tcgcgaatca gtcaaggtgg gttcgatacg tcggagaact
     2041 tcgcagggtc actcgatgga aaattcaagc tcgcgacgaa gagcattgcg cggcagagcc
     2101 ggaaccgaaa ctcggaattt ctcccgcaaa ggcgctaagc tcgcaaaggt gacgggccta
     2161 tgctcgccct cccgagcgca tgcgatgatc tgagaaagat ttctctctgt agtcgaaatg
     2221 acaataactc tgaatgtggt gcctttgcgc cttggaactg tgtcgttatt gtcatgccga
     2281 ggcgaaggcg aagaatctcg ctttcgcaag tggcagacga ggcgagatcc ttcgctctgc
     2341 tcaggatgac aggtctggga tttttgcgca ttttttcaac ttccggatcg ttgcgcaagc
     2401 cacgcaaatc aattgattcg cgccgcgtcc gccggcccga gcgaccattc tacggtgtcc
     2461 ggatgaatga tccgcgcgag aatttccagt ccgttgacga gccgcgggcc gggccggctg
     2521 aagtaggcgt tgccgttgag cgcgaatacc cgttccgcgc gcacggccgg taggtctttc
     2581 cagccgggca gggcgcgcag cggcgtcgac tctttcaccg cgcggcggac gtcaaaaccg
     2641 caaggcataa gcagaatcac ttccggctgg gcatcgacaa cctcgcgcca gtcgagcttc
     2701 gccgaaggct cgccggcgcg accgaggacg tcatgaccgc cggcgagggc gatcatctca
     2761 ggcacccaat gaccggcgct gtagagcggc tcgaaccact ccaaacaaac cacccgcggc
     2821 cggcggtccg gttcacggcc gccgacccgc tcgatgcgtt ggcgcagatt gtcgaccagc
     2881 gccatgacgg cgttgctccg accggtggcc gcgccgacgc ggcgaatatc gtcaaggatc
     2941 tcctgcatgc tatgggggtt caaagaaacg atcgcagggg ggcgtaataa tttaccggcg
     3001 gctttgacga cttcgtcgta gtccaaggcg cagacctcgc acagaccctg ggtgaggatg
     3061 acatccggcg cggcatcggc gaaggccgct tcatcgatgc agtacagacc tttgcccgct
     3121 tgtaacaact cggcgacttt gcggtcgatc tcggcgccgc tcatgcgttt ggcgtcgatg
     3181 acgcttttca caattgtcgg tttgttttgc gcatcggcgg ggtagtcgca ttcatgggtg
     3241 acgccgacta ggtcatcgcc gagcccg
//
LOCUS       DATIRS010000694         4230 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1330115, whole genome shotgun sequence.
ACCESSION   DATIRS010000694 DATIRS010000000
VERSION     DATIRS010000694.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4230
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1330115"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..977)
                     /locus_tag="VLM90_08740"
     CDS             complement(<1..977)
                     /locus_tag="VLM90_08740"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR01085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008765 -
                     UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HSQ13092.1"
                     /translation="MRVREFLALHKVQQADGDLEQEVHGLTYDSRQATAGKVFFAVPG
                     EQADGHDYLGDAVKRGAAAVVLSRAGAWPQAPATVRVNNVRNAMGLWAAHFYQRPSRN
                     LRLVGVTGTNGKTTLTYLVESILHEAGLVPGVIGTINYRYRGNVLPAHHTTPESVDLQ
                     ELLAEMVRSGVQAVAMEVSSHALAQERVRGLDFDVGVFTNLTRDHLDYHHDMDDYFAA
                     KSRLFNDYLPASVKPHKAAVIYGRDPRGEQLITACRAQGLAVWSYGDSGVWDVGPAQV
                     STDVSGIRGEIHAKERRLNIASSLVGSVNLQNILGAVGVGCALGLSDDV"
     gene            complement(983..2932)
                     /locus_tag="VLM90_08745"
     CDS             complement(983..2932)
                     /locus_tag="VLM90_08745"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="HSQ13093.1"
                     /translation="MRRSLKRNRLRMGCVKIVFLLVFLIVGGRAFHLQVFQGDKLMRL
                     GQRQHLKEWIVLPKRGALYDRGSEPLALSLESQSVYVRPHRLQNRAEANLKLARILNM
                     KRADVEQRLAAKKPFVWLKRQVSPVEAEQIQALHMDGIGMYLEPTRYYPQGGLAGHLL
                     GFVNRDSEGLEGIELRYNDYIRGAAGSSVSERDALGRRVLVEGVEGLQVPPGSDVYLT
                     LDSPIQHLAEKELAATIKKYRAKAGVAIVVDPATGEVLALANYPTFDPNNAAQQSADQ
                     RRNRAVTDSFEPGSTFKTILAAAALEEGVVGKDDLFYCEMGKYPYAGRVIHDTHPHGW
                     LPFSKILQVSSNIGFTKVAEKLNKDRYFKYIDKFGFGRVTGLDVPGEVPGLLRKPENW
                     SGVDLATHAFGQGVSTTPMQMVMAYAAIANGGILMRPYVTRKIVNPQGEVLVENQPHI
                     VRRVISEKTAKLLASMLRDVTNEGGTGVAAKVDGFEVAGKTGTAQKAERGSYSAKKRV
                     SSFVGFVPAENPRLVSLVLVDEPEGNVYGGVVASPAFRNIAQGALRQLAVAPRDGVVM
                     PSESAQAVPSLMRPVKRAGVQLVSTNSDAVPDFLGLSMREALEKAQSLRITLKLQGNG
                     YVVKQTPAPGEPRPEGQAVVVNLQG"
     gene            complement(2929..3276)
                     /locus_tag="VLM90_08750"
     CDS             complement(2929..3276)
                     /locus_tag="VLM90_08750"
                     /inference="COORDINATES: protein motif:HMM:NF016860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HSQ13094.1"
                     /translation="MATAVELENRRIARPKRAPGSRAAQATRRRRNWGVAMLIVTLLG
                     IVLVHVWLRLQVVHMGYVLATASKLKSRLEQENRELKVELATLTTRDRLNEMARRRLG
                     LAAPEKGQVIVLP"
     gene            complement(3286..4212)
                     /gene="rsmH"
                     /locus_tag="VLM90_08755"
     CDS             complement(3286..4212)
                     /gene="rsmH"
                     /locus_tag="VLM90_08755"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: protein motif:HMM:NF013919.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HSQ13095.1"
                     /translation="MYAHVSILVREVMDFLQLAPGRRYVDGTLGGGGHSEAILTASGP
                     DGQVVGLDRDDEAIAAASDRLKRFGARLTARQASFADAREVLTEIGWDKVDGVILDLG
                     VSSRQIDAAERGFSFRLGGRLDMRMDRRQSLDACRLVNTATVDELMRVFRAYGEEPQA
                     RRIAEKIAAERKLRPIESTDELARLVEGVKGGRRRDHHPATQVFQALRIAVNQELDQL
                     EHFLDDGFALLRPNRRMVIISFHSLEDRLVKNAFRKWSRACLCPPRALVCQCGWSQKV
                     KLLTKRPLVPGDAETAANPRARSAKLRAVERI"
BASE COUNT          849 a         1376 c         1176 g          829 t
ORIGIN      
        1 atcacgtcgt cgctcaatcc cagggcgcag ccgaccccaa cggcgcccaa tatattttgc
       61 aagttcaccg agccgaccag cgacgaggcg atgtttagcc ggcgctcctt ggcgtggatc
      121 tcgccgcgga tgccgctgac atcggtactg acttgcgccg gaccgacatc ccacacgccg
      181 ctgtcgccat agctccacac cgccaagccc tgcgcccggc aggcagtgat caattgctcg
      241 ccgcgcggat cacggccgta aatcaccgct gccttatgcg gcttcaccga cgccggcaag
      301 tagtcgttga acaagcggct cttggcggca aagtagtcgt ccatgtcgtg atgatagtcg
      361 agatgatcgc gcgtcaaatt ggtaaacacg ccgacatcga agtcgaggcc gcggactctt
      421 tcctgggcca gagcatggga tgagacttcc atcgccaccg cctggacccc gctccgcacc
      481 atctccgcca acagctcctg taaatcgacg gactcgggcg tcgtatgatg cgccggcaac
      541 acgttgccgc ggtagcggta gttgatcgtg ccgatgactc cgggcacgag gccggcctcg
      601 tgcaatatcg actcgaccaa gtaggtcaaa gtggttttgc cgttggtgcc ggtaacgccg
      661 accagccgta aattgcggct cgggcgctga tagaaatgcg ccgcccacaa ccccatggcg
      721 tttctgacat tgttgacccg caccgttgcc ggcgcctggg gccaagcacc ggcgcgcgac
      781 aaaaccaccg cggcggcgcc gcgcttgacc gcatcgccga ggtagtcatg gccgtcggcc
      841 tgttcgcctg gcacggcgaa gaaaaccttc cccgctgtcg cttggcgcga gtcgtaagtt
      901 aagccgtgca cttcctgctc cagatcaccg tcggcctgtt ggactttgtg cagcgctaag
      961 aactcgcgta ctcgcatcgg cgtcaccctt gcagatttac caccactgct tggccttccg
     1021 gccggggctc gcccggggcg ggtgtttgct tcacgacata gccgttgccc tgcagtttca
     1081 acgtaattct taacgactgc gctttctcca aggcctcgcg catgctcaga ccgagaaaat
     1141 ccggtaccgc atcgctattg gtggaaacca gctgcacccc ggcgcgcttg actggacgca
     1201 tcagcgaagg cacggcttgc gccgactcgc tcggcatcac cacgccgtcg cgcggcgcca
     1261 ccgcgagttg gcgcaaggcg ccctgagcaa tattgcggaa tgccggtgac gcgactacgc
     1321 cgccataaac attcccttcc ggttcatcga ctaagaccaa cgataccaag cgcggattct
     1381 ccgccgggac gaagccaacg aacgaactca cccgtttttt cgccgagtaa ctgccgcgct
     1441 cggccttctg tgccgtgccg gttttgccgg cgacttcgaa gccatcgact ttggccgcca
     1501 cgccggtgcc gccttcgttg gtgacatcgc gcagcatcga cgccaacaac ttcgcggtct
     1561 tctcggaaat cacccggcgg acaatatgcg gctgattttc gaccaagacc tcgccctgcg
     1621 ggttaacgat tttgcgggtt acgtagggac gcatgagaat accgccgttg gcgatcgccg
     1681 cataagccat gaccatctgc atgggcgtcg tcgatacacc ctgaccgaac gcatgggtcg
     1741 ccaggtcgac acccgaccag ttttccggtt tacgcagcaa accgggaact tcgccgggca
     1801 catcgagacc cgtcacccgg ccaaagccga atttgtcgat gtatttgaaa taccggtcct
     1861 tgttgagctt ctccgcgacc ttggtaaaac cgatattact cgacacctgg agaatttttg
     1921 aaaatggcag ccagccgtgc ggatgggtgt cgtggatcac ccggccggca tagggatact
     1981 tgcccatctc acagtaaaac aggtcgtctt tgccgaccac gccttcttcg agcgccgcgg
     2041 ccgcgagaat cgttttaaat gtcgacccag gttcgaagct gtcggtcacc gcgcgattac
     2101 gccgttggtc ggcgctttgt tgcgcagcat tgttgggatc gaaagttgga taattagcca
     2161 acgccaagac ttcgccggtg gcgggatcga caacgatcgc aacccctgcc ttggcgcggt
     2221 attttttaat cgtcgctgcc agttcttttt ccgccagatg ctggatcggc gaatccagag
     2281 tcagatagac atcgctgccg ggcggcacct gtagcccttc caccccctcg accaaaacgc
     2341 ggcgcccgag ggcatcccgc tcggacaccg aagatcccgc cgcaccgcga atatagtcgt
     2401 tgtaacgcag ctcgatacct tcgagccctt cggaatcgcg attgacgaat cccaacaaat
     2461 gtcccgccaa gccgccctgt ggatagtagc gcgtcggctc caagtacatg ccaatgccgt
     2521 ccatatggag cgcttggatc tgctccgctt ccaccggcga gacctggcgc ttgagccaaa
     2581 cgaagggttt tttggcggcg agcctttgct ccacatcggc gcgtttcata ttgaggatgc
     2641 gggccaactt caggttggct tcggcgcggt tctggagcct atggggtcgg acgtaaaccg
     2701 actgcgactc caagctcaag gccaatggct cgctgccgcg gtcgtataaa gcaccgcgct
     2761 tgggcaggac gatccattcc ttcaaatgct ggcgctggcc gaggcgcatc aacttgtcgc
     2821 cttggaaaac ttgcaagtga aacgcgcgcc caccgacgat caaaaatacc agcaggaaaa
     2881 caattttcac acagcccatg cgcaggcgat ttcgtttaag cgaacgtctc atggtagaac
     2941 gatgacctga cctttctccg gcgctgccag acccaaacgg cggcgcgcca tctcattgag
     3001 ccgatcgcgc gtcgtcaaag tcgccagctc gactttgagc tcgcgattct cctgctccaa
     3061 acggctcttt aacttgctcg cggtggcgag cacgtatccc atatggacaa cctgcaaacg
     3121 caaccaaaca tggaccagca cgatgccgag cagcgtaacg atgagcatag ccacgcccca
     3181 attgcggcgc cggcgcgtcg cctgagcggc gcggctgccg ggcgcgcgct tggggcgggc
     3241 gatacgccga ttctcaagtt cgaccgcagt tgccatggct gtgactcaaa tgcgctcgac
     3301 ggcgcgtaat ttggccgacc gggcgcgcgg gttggccgcc gtctcagcgt cgcccggcac
     3361 taacggtctt ttggttaaga gtttcacctt ctggctccaa ccgcactggc aaaccagcgc
     3421 ccgcggcgga cataaacaag cgcggctcca tttacgaaag gcatttttca ccaaacgatc
     3481 ttccaacgaa tgaaacgaaa taatcaccat gcgccggttc ggccgcagca aagcaaaacc
     3541 gtcgtcgaga aaatgttcca actggtcgag ctcctggttt acggcgatgc gcagtgcctg
     3601 aaacacctgg gtcgccggat ggtggtcgcg gcgccggccg cctttaactc cctcaaccaa
     3661 gcgcgccagc tcatcggtgc tctcgatggg ccggagcttt ctttcggcgg ctatcttttc
     3721 ggcgatgcgc cgcgcttgcg gctcctcgcc ataggcccga aatactcgca tcagctcatc
     3781 gactgtggcc gtgttaacca gccggcaggc gtcgagcgat tgccggcggt ccatgcgcat
     3841 atccaaacgc ccgcccaagc gaaaactaaa tccccgctcg gctgcatcga tttgccgcga
     3901 cgaaacgcct aagtccaaaa tgacaccatc aactttgtcc caaccgatct cggtgagaac
     3961 ctcacgggca tcggcgaaac tcgcttgccg cgcggtcagc ctagcgccaa agcgcttcaa
     4021 gcggtcgctg gccgcggcga tcgcctcatc gtcccgatct agtcccacca cctggccatc
     4081 tgggccgctc gccgttaaaa tcgcttcgct gtggccgccg ccgcccaaag tgccgtcgac
     4141 gtaacgccta cccggcgcca gttgaagaaa atccatgacc tcgcggacca gtatggagac
     4201 atgagcatac acagcttaat ggctggtccc
//
LOCUS       DATIRS010000695         1542 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_149695, whole genome shotgun sequence.
ACCESSION   DATIRS010000695 DATIRS010000000
VERSION     DATIRS010000695.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1542
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149695"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..329
                     /locus_tag="VLM90_08760"
     CDS             <1..329
                     /locus_tag="VLM90_08760"
                     /inference="COORDINATES: protein motif:HMM:NF012506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="citrate/2-methylcitrate synthase"
                     /protein_id="HSQ13096.1"
                     /translation="LKLADRAAAAGVVSGIFAAIGRAVEKNLAQRKHRKIPMNIDGAT
                     AVIFAELGFPPPLCRGLFVLSRSVGALAHAWEESQSGERNKGPIPRHLLWKYLGPKPR
                     RMKKIR"
     gene            498..1451
                     /locus_tag="VLM90_08765"
     CDS             498..1451
                     /locus_tag="VLM90_08765"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ13097.1"
                     /translation="MGKRFFSFLVVVALSALASTLYAQPSLKMMIPANPGGGWDQTGR
                     NLAAAMQSVKLVSSVQFDNKGGAGGTIGLAQFVNSAKGDPNAVMIGGMVMVGAIYLDN
                     APVNLTMVTPLARLTGEYEIIVVPASSPHKSMGDLVKAFKANPGGVSWGGGSAGGTDH
                     ILVGLIAKAAGVDPAKINYVPFKGGGEAIAAIVGGHVTAGVSGIGEFAEQIKGGRMRS
                     LAVSSPSRVDSFQTLKEQGLNVELANWRGVFGAPGITTAQRDGLIKIVRGATESKAWK
                     DTLEKLGWSPIFLAGDAYKKFVDEDTKRIAGIIDSLGIKGK"
BASE COUNT          327 a          447 c          460 g          308 t
ORIGIN      
        1 ttttgaaact cgccgacaga gcggcggcgg cgggcgtagt atcgggaatc ttcgccgcca
       61 taggccgggc agtcgagaaa aatttggcgc agcgaaagca tcggaaaatt cccatgaaca
      121 tcgacggcgc caccgccgtc atcttcgccg aactcggctt tccgccgccg ctgtgccgcg
      181 gcctattcgt tctttcccgc tccgtcggcg cgctggcgca cgcctgggag gaaagccaat
      241 ccggcgaacg taacaaagga cccattccgc gccatttact ctggaaatac ctcggcccca
      301 aacccagacg tatgaagaaa attcgttaat ttcattccgc gtgtattccg gattccgagc
      361 cctacgattt gaacggattg aacattttga acgacttgaa cccacccgga tcataaatcc
      421 agcttgtcaa ttttaccgtc ctttactata catcgctaaa cataggagta gatctcgaag
      481 gattccaagg aggctttatg ggcaagcggt ttttcagttt tctcgtggtt gtcgcgctgt
      541 cggcgctggc atccaccctg tacgcgcagc cgagcttgaa gatgatgatc ccggccaatc
      601 ccggcggcgg ttgggaccag accgggcgca atcttgcggc ggcgatgcag agcgtcaagc
      661 tggtgtcgtc cgtgcaattt gacaataagg gcggcgccgg cgggacgatc ggattggctc
      721 aattcgtcaa ttctgccaag ggcgatccca acgccgtgat gatcggcggc atggtcatgg
      781 tcggcgcgat ctatctcgac aacgccccgg tcaatctaac catggtgaca ccgctcgcgc
      841 gcctcaccgg cgagtacgag attatcgtcg tgccggcgag ctcaccgcat aaatcgatgg
      901 gcgatctcgt caaagcgttt aaagccaatc ccggcggtgt ctcttggggc ggcggctccg
      961 ccggcggcac cgatcatata ctagtcggcc tgatcgccaa ggcggcgggc gtcgatccgg
     1021 caaaaatcaa ctacgtcccg tttaaaggcg gaggcgaggc gatcgcggcg atcgtcggcg
     1081 gtcatgtcac ggcgggcgtt tcaggcatcg gcgagttcgc cgaacagatt aaaggcggcc
     1141 gcatgcgctc gttggccgta tcaagtccat cgcgggtcga cagcttccaa acactcaagg
     1201 aacagggact gaacgtggag ctggccaatt ggcgcggggt tttcggcgcg ccgggaatca
     1261 ccacggcgca gcgcgacggg ttgatcaaga tcgttcgcgg cgccaccgag tcgaaggcgt
     1321 ggaaagacac cctggagaaa ctcggctggt cgccgatttt tttagccggc gatgcctaca
     1381 agaaattcgt cgacgaagat accaagcgca tcgctggcat catcgactcg ctcggcatca
     1441 agggcaaata accctggcaa gatgaaagct aaacccgcgg agctgatcct ttcgttcgcg
     1501 gtcctggtcc tggggattgc ggttgccgtg gcggcagcac ag
//
LOCUS       DATIRS010000696         1670 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1919263, whole genome shotgun sequence.
ACCESSION   DATIRS010000696 DATIRS010000000
VERSION     DATIRS010000696.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1670
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1919263"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(40..759)
                     /locus_tag="VLM90_08770"
     CDS             complement(40..759)
                     /locus_tag="VLM90_08770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13098.1"
                     /translation="MSEPSKPKQAATVILLRPAELRGFEVFLTRRPDAMPFLGGMYCY
                     PGGTVSKQDCRAAAIARTVGRTPKQARQIIGAAFAPEEAIGLWIAAVREVFEEVGVLL
                     AAEPSGAKLSTTSERAARLAERHGELSTHPLTFTALLEGEQLYCDLGSLSHFSYWQTP
                     ARFAMRFDTRFFLAALPPGQTPLATSYEVAHSVWLTPDRAMQLYNRGELPMIFPTFAA
                     LRTLADFDTLDSVLGEFGLEK"
     gene            complement(756..1523)
                     /locus_tag="VLM90_08775"
     CDS             complement(756..1523)
                     /locus_tag="VLM90_08775"
                     /inference="COORDINATES: protein motif:HMM:NF017551.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NRDE family protein"
                     /protein_id="HSQ13099.1"
                     /translation="MALYFNVFADLPLLVAANRDEHFDRPSAPPAEIAGDPRIVAGRD
                     LRVGGTWLGVNEYGVLVGILNRRQNENGSDGLLPTLTRSRGLLCMDLLQRTSAAEGAQ
                     FIAGHSTAYNPFTVVFADRQSAWVAYNNHDSKIVSRRLDPGLHVFSSAAELDLNSAKA
                     DRAHPRFAHLKDRIPIGRAEPATWLSDLHAVLGDHTLREGSIDPGDAICVHRETTGTV
                     SSSVVALAAVRSRFDTFFCPGPPCQNSFTGPVSLAIR"
BASE COUNT          353 a          486 c          524 g          307 t
ORIGIN      
        1 tgccgcgcta tgcgctccgt ggtgaaactc gttctccggc tatttttcca ggccgaactc
       61 gcccagcacg ctatccaagg tgtcgaagtc ggctaacgtg cgcagcgctg cgaaggtcgg
      121 gaagatcatc ggtagctcac cgcgattgta cagctgcatg gcacggtcgg gggtgagcca
      181 gacgctgtgg gcgacttcgt aggaagtcgc cagcggcgtc tggcccggcg gcagagcggc
      241 gagaaaaaag cgcgtgtcga aacgcatggc gaaccgcgct ggtgtctgcc agtaggagaa
      301 atggctcaag ctaccgagat cgcagtaaag ctgttctcct tccaacagtg ccgtgaaggt
      361 gagggggtgg gttgacaact cgccatggcg ctcggccaag cgcgcggcgc gttctgatgt
      421 cgtggagagt ttcgcgcctg acggttcggc ggcgagaagc acgccgactt cctcgaagac
      481 ctcgcgcaca gcggcgatcc acaggccaat ggcttcttcc ggtgcaaaag cggcgccgat
      541 aatctggcgc gcttgtttgg gcgtccggcc caccgtccgg gcgatcgccg ccgcgcggca
      601 gtcttgtttg ctcacggtgc cgccgggata acagtacatg ccgcctaaaa atggcatggc
      661 gtcgggccgg cgggtgagaa atacttcgaa gccgcggagc tcggctggac gcaggagaat
      721 cacggtggcg gcctgtttgg gtttgctcgg ctcgctcatc ggatcgccaa actcaccggg
      781 ccggtaaaac tgttttgaca aggcgggccg ggacagaaaa aagtatcgaa gcgcgagcgt
      841 accgcggcca atgcgaccac gctcgacgac accgtgccag tagtctcgcg gtgcacgcaa
      901 atcgcgtcgc cggggtcaat ggagccttcg cgcaacgtgt gatcgccgag gactgcatgc
      961 agatcactca gccaagtcgc tggctcggcg cggcctatgg gtatgcgatc tttcaaatga
     1021 gcgaagcgcg gatgggcgcg atcggccttg gccgagttca aatcgagttc cgcggcgctg
     1081 ctgaaaacat ggaggccagg gtccagccgc ctgctgacga tcttgctgtc gtgattattg
     1141 taagccaccc acgctgattg acggtcggcg aaaacgaccg tgaaaggatt gtaagcggtg
     1201 ctgtgaccgg cgatgaactg cgcgccctcg gcggcgcttg tgcgctgcaa caggtccatg
     1261 cacaacaatc cccgtgagcg ggtcaacgtc ggtagcagtc catcgcttcc attctcattt
     1321 tgacgccgat tcaagatgcc gaccaacacg ccatattcgt tgacacccaa ccaggtgccg
     1381 ccaacgcgca gatcgcgccc ggcaacgatg cgcggatcgc cggctatctc cgccggcggc
     1441 gccgatggcc gatcgaagtg ttcgtcccga ttggccgcca ccagcagcgg caaatcggca
     1501 aaaacgttaa aatacaacgc caaggtgcac acgagtcaat gatttatcca atggccagca
     1561 cttgtgcaaa cttcggctag tgcgattctc cttgaagagt tccaaagcac gaaagaatcg
     1621 gatttatctc ccgcaaaggc gccaaggagc aaagctagga aaaaattttt
//
LOCUS       DATIRS010000697         2412 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1035597, whole genome shotgun sequence.
ACCESSION   DATIRS010000697 DATIRS010000000
VERSION     DATIRS010000697.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2412
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1035597"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..443
                     /locus_tag="VLM90_08780"
     CDS             <1..443
                     /locus_tag="VLM90_08780"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HSQ13100.1"
                     /translation="GEDPPLVAAGEARAQALAETLRDAGITRIVTTQWRRTRDTAQPL
                     AKLLKITPQVIPVLEGKARENVEEVAAAVSRYQDETVLIVGHITVTGVIAALGGPRLP
                     TICDNVFSDLFLFTPAAGDAGLLHLHYGAAEDISPRCRISRPVD"
     gene            complement(487..1827)
                     /locus_tag="VLM90_08785"
     CDS             complement(487..1827)
                     /locus_tag="VLM90_08785"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HSQ13101.1"
                     /translation="MTSPGSASYAPPRGESRRGLNLPGLVGLTFFCVAGGAYGLEDGV
                     GAAGPLVVLLGIVILPWLWSLPTALMTAELSTAMPEDGGYVVWVEKAFGRFWGFQEGW
                     LSWLCSFADNALYPVMFVDYLAYLRGDMEPLERWLIAAALISIVTWLNIRGTRLVGLS
                     SIVFTALVLAPFAVMLVVGLPQVSPANWLQRTATTDWPLLISILLWNTSGWDNAGCCA
                     GAVDAPNRVYPRAMMLTLILVTAAYLLPLAVGTGVDSDWSQWKEGYLPKIAAQIGGSW
                     LGIWLTAAALISAAGMFSALLCTSARVPYAMARRTMLPRALAATHPDYATPWRAILIN
                     SAGVALLIPFSFQELIEVDMFLYAAALLLEFAALVWLRIKRPEMPRPYRIPCGTSGVI
                     AICIPPIALCLLSIALSNPATKYLGLGSIVVGLLVYRWQARATPVAEIETAPIA"
     gene            1948..>2412
                     /locus_tag="VLM90_08790"
     CDS             1948..>2412
                     /locus_tag="VLM90_08790"
                     /inference="COORDINATES: protein motif:HMM:NF015587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhjD/YihY/BrkB family envelope integrity
                     protein"
                     /protein_id="HSQ13102.1"
                     /translation="MAKSRATSKAKRSIRQMKSDVFEQVLESELDELTRVKRWCHAAL
                     KIAVMVWQDFFDNLVKLQAMALAFKTLLSLAPLLAVLFSILKAFGVHNRMEPAMAEAL
                     APLGDKGREITAYLIGFVDKMSAGALGAVGLVTLFLTVLSLMHSIEEAFNRIW"
BASE COUNT          501 a          705 c          772 g          434 t
ORIGIN      
        1 agggcgaaga tccgccgctg gtcgccgccg gcgaagcgcg cgcccaggcg ctcgccgaga
       61 ccctgcgcga tgcgggcatt acgcggatcg tcacgacgca atggcgccgc actcgcgaca
      121 cggcgcagcc gctggcgaaa ctgctgaaga tcacaccgca ggtgattccg gtgctggaag
      181 gaaaggcgcg ggagaatgtc gaggaagtgg ccgcggcggt gagccgctac caagacgaga
      241 cggttctgat cgtcggccat atcacggtga ccggcgtcat cgctgctctc ggcggaccgc
      301 ggctgccgac gatttgcgac aacgtgtttt ccgatctgtt cttatttacg ccggcggctg
      361 gcgacgcggg tttgttgcat ctgcattacg gcgcggcaga ggacatttcg ccgcgctgcc
      421 ggattagccg gccggtggat tgagatcggc gaactcacgc aaagaaatac cctgtccgcg
      481 aataatttac gcaatcggcg cggtttcgat ttccgctacg ggcgtggctc gcgcctgcca
      541 gcgataaact agcaatccaa ccacgatgct gcccaagccg aggtactttg tcgctgggtt
      601 cgatagggcg atgctaagca agcacaacgc tatcggtgga atacagatgg cgatcacgcc
      661 tgaagtgcca caggggattc gatagggtcg cggcatctcc ggccgcttga tccgcagcca
      721 aaccagagcg gcgaattcca agagcaacgc ggcggcgtag agaaacatgt cgacttcgat
      781 caattcctga aacgaaaatg ggattagcaa cgcgacgccg gcgctgttga tgagaattgc
      841 gcgccatggc gtggcatagt ccggatgagt tgccgccaac gcgcgtggca acatggttcg
      901 ccgcgccatg gcgtagggga cgcgcgccga ggtgcagagc agggcgctga acatgcccgc
      961 tgcgctgatc aacgccgcgg cggtgagcca aatacccagc catgagccgc cgatctgcgc
     1021 ggcgatcttg ggcagatagc cttccttcca ctgcgaccaa tcggagtcga ctcccgtgcc
     1081 cacagccagt gggagcaagt aggctgcggt gaccaagatt aacgtaagca tcatcgcgcg
     1141 cgggtaaacg cgattgggcg cgtccaccgc gccggcgcag cagccggcgt tgtcccagcc
     1201 cgaggtgttc cataagagga tgctgattaa aagcggccag tcggtggtcg cggtgcgctg
     1261 cagccagttc gccggcgaca cttgcggcag gccgacaacc agcatcacgg cgaagggcgc
     1321 gagcacaagc gctgtgaaga cgatggaact caggccgacc aggcgcgtgc cgcgaatgtt
     1381 gagccaggtg acgatgctga tgagcgcagc ggcgatgagc cagcgctcca acggctccat
     1441 gtcgccgcgc aagtaggcga gatagtcgac gaacatcacc ggatagagcg cgttgtcggc
     1501 gaagctgcac agccagctca gccagccttc ctgaaagccc cagaatctgc cgaaggcttt
     1561 ttccacccag acgacgtaac cgccgtcctc cggcatggcg gtcgacaact ccgcggtcat
     1621 caacgccgtc ggcaaactcc agagccatgg aagtattaca attcctaaaa gcaccacgag
     1681 cgggccggcg gcgccgacac cgtcctccag accataggcg ccgccggcga cgcagaaaaa
     1741 agtcaggccg acgaggccgg gaaggttcaa gccgcgccgg gattcaccgc gcggtggcgc
     1801 gtaagatgcg gagcctggcg atgtcatgtt gccgcgcagc atagcgagcg aggtttcgtc
     1861 ttgtcaacga accggcgtca ttgctttgtc ggcgcaggtc aaagctgata tcttcgattt
     1921 actttacttc ccgtcggttt cccatttatg gctaaaagcc gcgccacgtc taaagccaag
     1981 cgatcgattc ggcagatgaa gagcgatgta ttcgagcagg tgctggaatc cgagctcgat
     2041 gagctgacgc gagtcaagcg ttggtgccac gctgccctca agatcgcggt gatggtgtgg
     2101 caggattttt ttgacaacct ggtgaaactc caggcgatgg cgctggcgtt taaaactctc
     2161 ttgtcgctgg cgccgctcct ggcggtgcta ttttcgatcc tcaaagcctt tggcgtgcac
     2221 aatcgcatgg agccggcgat ggccgaggcg ctcgcgccgc tgggcgacaa gggccgagag
     2281 attaccgcgt atctgatcgg ttttgtcgat aagatgagcg ccggcgctct gggcgcggta
     2341 ggcttagtga cattgttcct taccgtgctg tccttgatgc atagtatcga agaagcgttc
     2401 aaccgaatct gg
//
LOCUS       DATIRS010000698         2350 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1724307, whole genome shotgun sequence.
ACCESSION   DATIRS010000698 DATIRS010000000
VERSION     DATIRS010000698.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2350)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2350)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2350
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1724307"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(255..1439)
                     /locus_tag="VLM90_08795"
     CDS             complement(255..1439)
                     /locus_tag="VLM90_08795"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ13103.1"
                     /translation="MTISFRPRWYFFVALVSITFIGPLSLHLFIPAMPAVKEAFGVST
                     GMAQLTMSLAMFSMAFFTVAYGGLSDRFGRKRVLLGGLVLFTCGAASCMAAANMPMLV
                     AGRILQGAGAGCGVVLARAIARDVYGQDRVAQVIAYLTAAYVLGPMFAPPIGGHLTVL
                     FGWRALFVLASVVGLVVILAVAFAVPETRTRSAGAPRGVFAGYKSLLRRPRFVGFMLQ
                     PGMMSAAFFTQATAASFLATEHLGADAARIGLWFFAFPIGFMAGSFISGRVGARRSIE
                     FMTILGGMIGVANGALLIGWLYFGGISMAALYIPGMFVSLAQGLSMPYAQAGAMAVDT
                     ELAGSASGAVVFSQLFWPAALQQLTGLLADGTWVPMATVHFAAVIVALLAGWMATARP
                     ER"
     gene            complement(1468..2241)
                     /locus_tag="VLM90_08800"
     CDS             complement(1468..2241)
                     /locus_tag="VLM90_08800"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HSQ13104.1"
                     /translation="MPRHRKRPMAVDLQNRHDHQNKFDFLALGVREYGARHGIWRLLD
                     VLDKHGVKATIPTNGLTAELFPATVRASRDRGHEVAAHQWDMAVFPPMFTSREEEQSS
                     LARTVAAIENVIGSKVRGYLSPGPRPTRFTLDLLMESGFLWTSDYVDSDFPYVISRND
                     KRIVAISYATPGYTDGDLSSRGIIQGLAEIKYAFDATFEESKRHPMKFCYAIHPHVSG
                     TVGMSRLLDDFLAHVRSRGEIWFPTCGEIAEFWSAGVDQ"
BASE COUNT          513 a          716 c          724 g          397 t
ORIGIN      
        1 atatcgattt cgcttgagcc gtcgatgact tgcttcgcgg cgtctcgccg gcgcggctca
       61 tctgaaactt cacgagcttc tatctaggcc tatatttcaa cattgcgggt attttgtcgg
      121 tctcaccact ttttcaacgt gagagcgcgc tcctattgat tcagtttgga tgacttattc
      181 gcgatcaccc atcgacccca gtagatggcc tgacgcgtaa cgagagatcg gtcgctttga
      241 ctctgtataa agcgctagcg ctcaggccgc gccgttgcca tccagccggc aagaagtgct
      301 acgatcactg cggcaaagtg cacggtcgcc atcggcaccc aggtcccgtc cgcgagcaac
      361 ccggtaagct gctgcagcgc ggccggccag aaaagctgcg agaacaccac cgcgcccgac
      421 gccgaaccgg caagctcggt gtcgaccgcc atcgcgccgg cttgagcgta gggcatggac
      481 aggccttggg cgaggctgac gaacattccc ggaatgtaga gcgcggccat ggaaatgccg
      541 ccgaaataaa gccagccaat gagcagcgcg ccgttggcga cgcctatcat gccgcccagg
      601 atggtcatga attcgattga acgcctggct ccgacgcggc ccgagatgaa actcccggcc
      661 atgaagccga tcgggaaggc gaagaaccac aggccgatcc tggcggcatc ggcgccgaga
      721 tgttcggtgg cgagaaatga tgccgcggtc gcctgggtga agaaggcggc cgacatcatt
      781 cccggctgta gcatgaaacc gacgaagcgc gggcgacgta gcagcgattt atagccggcg
      841 aatacgccgc gcggcgcgcc ggcgctgcgc gtgcgggttt ccggcaccgc gaaagccacc
      901 gcgaggatca ccaccagacc gacaaccgac gctagcacga acagcgcgcg ccagccgaac
      961 agcacagtca agtggccgcc gatcggcggc gcaaacatcg gcccgaggac gtaggcggcg
     1021 gtgagatagg cgatcacctg ggcaacgcgg tcctggccgt agacatcgcg ggcgatggcg
     1081 cgcgccagca cgacgccgca gcccgccccc gctccctgca gtatgcgccc cgccaccagc
     1141 atcggcatgt tggcggcggc catgcagctg gcggcgccgc aggtaaacaa caccagcccg
     1201 cccaggagca cgcgcttgcg cccgaagcgg tcggacaagc cgccgtaggc aaccgtgaaa
     1261 aaagccatcg agaacatcgc cagcgacatc gtgagctgcg ccatgccggt cgagactccg
     1321 aacgcttcct tcaccgccgg catggccggg atgaagagat ggagcgaaag cggcccgatg
     1381 aatgtgatgg agaccagcgc gacgaaaaaa taccagcgcg gccggaagga aatcgtcatg
     1441 gagaaatctt tggaatcgtg cccgtgacta ctggtccacg ccggccgacc aaaactcggc
     1501 gatctcgccg caagtcggaa accagatttc gccgcgactg cgcacatggg caagaaaatc
     1561 gtcgaggaga cgtgacatgc cgaccgtgcc actcacatgc ggatggatgg cgtaacagaa
     1621 tttcatggga tgacgtttag actcttcgaa tgtcgcgtca aaagcatatt tgatctccgc
     1681 cagtccctgg ataataccac gcgatgagag gtcgccatcg gtgtagccgg gcgtggcata
     1741 gctgatcgcg acgattcgct tgtcattgcg ggaaataaca taaggaaagt cggaatcgac
     1801 atagtcactc gtccacagaa agccgctttc catcagcaga tcgagtgtga agcgcgtcgg
     1861 acgcggaccg ggtgacaggt aaccgcggac cttgctgccg atgacgtttt cgatcgccgc
     1921 gacggttctg gcgagagatg attgttcttc ttcgcgcgac gtgaacatcg gcggaaatac
     1981 ggccatgtcc cattgatgcg cggcaacctc gtgcccgcga tcgcggctcg cgcgaacggt
     2041 cgccgggaag agttccgcgg tcaagccgtt tgttggaatt gtcgccttga ccccgtgctt
     2101 gtccagtaca tcgagaagcc gccagatgcc gtggcgcgcg ccatattcac gcacgccgag
     2161 cgcaagaaaa tcgaacttgt tttgatgatc gtggcggttt tgcagatcaa ccgccatcgg
     2221 acgtttgcgg tggcgcggca cggactccca ctcgttgaga atgagaatct gcaccgccat
     2281 cgtcacgccg ttcggccagg cacggaacca ctccgggcgg agcggaatct gtgggcgcaa
     2341 atcccattga
//
LOCUS       DATIRS010000699         1770 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_839142, whole genome shotgun sequence.
ACCESSION   DATIRS010000699 DATIRS010000000
VERSION     DATIRS010000699.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1770)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1770)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1770
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_839142"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..326
                     /locus_tag="VLM90_08805"
     CDS             <1..326
                     /locus_tag="VLM90_08805"
                     /inference="COORDINATES: protein motif:HMM:NF019998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TOBE domain-containing protein"
                     /protein_id="HSQ13105.1"
                     /translation="DCVVFGRTYHPDGIKTGAAVYIGVRPEDVEILPANGSKPPPGMI
                     GGTAQAALFIGERIEYQVEVEGQSTVLLYGERHQPIDEGNKVWLKLRPDGHSAWSSDW
                     SHKED"
     gene            406..1566
                     /locus_tag="VLM90_08810"
     CDS             406..1566
                     /locus_tag="VLM90_08810"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ13106.1"
                     /translation="MLLCALLLFTANGAAAAAPAAPMKAAPQASANFEAEWSKLIAAA
                     QQEGTVSIASGGAPSRQYRPVVDAFNKKFNIKVEVSTGNATDTVNRVLAERKAGKFTM
                     DVALISSRENQQRLVPSESVVPLAPLMIHPEVTDLSKWYKGRHMYTDKFGKFTMIYHA
                     GLEDQYETWYNTDKIKEAEIATLNLQTDVFHPRWKGKIAGQGLGDPSGIRQMIDSYYE
                     PDRGPDWVKKYMLDTGVTFSDDRRILETWLVNGRFPLQFVATGTEDYVALSRKGLPIK
                     PRYLVKKQGVLRASGSGCCISAFANPPHASAAKLFINWFLSKEGQTATHTLIPNLDRS
                     SLRNDIPFGEVSPQQRRGYGKEYAFPDSEPTSSEKTEEIQKWVFKLWESRQK"
BASE COUNT          404 a          547 c          490 g          329 t
ORIGIN      
        1 cggactgcgt ggtgttcggc cgcacttatc atcctgatgg cattaaaacc ggcgcggccg
       61 tttatatcgg cgtgcgtccg gaggatgtcg aaatcctgcc ggcaaatggg agcaagccgc
      121 caccggggat gatcggcggc accgcgcaag cggcgctgtt tatcggcgag cgcatcgagt
      181 accaagtcga agtcgaaggg caaagcacgg ttttgctcta cggcgagcgg caccagccca
      241 tcgatgaagg caacaaagta tggctcaagt tgcgccccga cggccacagc gcgtggtcat
      301 cggactggtc gcacaaggaa gactgaggag gatattatga ggaccctaaa tacaactgtc
      361 agcgattatc tgcggcgact tggatcgtcc gaccgaaccg ccggattgtt actgtgtgcc
      421 ttattgcttt tcacggccaa cggcgccgct gccgctgcac cagcagcgcc gatgaaagcc
      481 gctccgcaag ccagcgccaa cttcgaagcg gaatggtcca agctcatcgc cgccgcgcag
      541 caggaaggca ccgtgtcgat cgcctccggc ggcgcgccgt cgcgacagta tcgtccggtg
      601 gtcgacgcct tcaacaagaa attcaacatc aaagtcgaag tctccaccgg caacgccacc
      661 gacacggtca atcgagtttt ggccgagcgc aaagccggta aattcaccat ggacgtggcg
      721 ctgatcagct cgcgcgaaaa tcagcagcgc ctggtgccct cggaatcagt ggttccgctc
      781 gcacctctga tgatccatcc cgaggtcacc gacctgtcga agtggtacaa aggccgccac
      841 atgtacaccg acaagttcgg caagttcacg atgatctacc acgccggctt ggaggaccag
      901 tacgagactt ggtacaacac cgacaagatc aaagaagccg agatcgcgac gctgaacttg
      961 caaaccgacg tgtttcatcc gcgctggaag ggcaagatcg ccggtcaagg cctgggcgat
     1021 ccctcgggca tccgccagat gatcgatagc tactacgagc ccgaccgcgg tcccgactgg
     1081 gtcaagaaat acatgctcga caccggcgtc accttcagtg acgatcggcg catacttgag
     1141 acttggctgg tgaacggccg cttcccgctg cagttcgtcg ccaccggcac cgaagactac
     1201 gtcgccctgt cgcgcaaagg cttgccgatc aagccgcgct acttggtcaa gaagcagggc
     1261 gtgctgcgcg cttcgggctc gggctgctgc atttcggcgt ttgctaaccc gccccatgcc
     1321 agcgccgcca agctattcat caattggttt ttgagcaagg aaggccagac ggcgacccac
     1381 actttgatac ccaatctcga ccgctcgtcg ctgcgcaatg atattccttt cggtgaagtg
     1441 tcaccgcagc agcgtcgcgg ctacggcaag gagtacgcct tccccgactc cgagcccacc
     1501 agcagcgaaa aaaccgaaga aatccagaag tgggtgttca agctctggga gagccggcaa
     1561 aagtaaaact cgttcaaaac gttgcaatcg ttcaagccgt tcaaatcgtt aaatacgttc
     1621 tcaacctccg taacgttttg aacgacttga acggtttaaa cctcccttgc taattcatgg
     1681 aacattctcc aacaatcgat caactaaaca tcgcgcccgc gctccccgcg ccgcggctca
     1741 gccgcggcca tttcatcatg gcggcgctgt
//
LOCUS       DATIRS010000700         2612 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_149990, whole genome shotgun sequence.
ACCESSION   DATIRS010000700 DATIRS010000000
VERSION     DATIRS010000700.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2612
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149990"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            650..2350
                     /gene="ilvB"
                     /locus_tag="VLM90_08815"
     CDS             650..2350
                     /gene="ilvB"
                     /locus_tag="VLM90_08815"
                     /inference="COORDINATES: protein motif:HMM:NF006016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HSQ13107.1"
                     /translation="MQLTGAQLITALLERQGVTTIAGIPGGANLPLYDALQASSIRHI
                     LARHEQGAGFIAQGMARVTGRPAVCLATSGPGATNLLTAIADAKLDSIPLVAITGQVP
                     RNMIGTDAFQEVDTFGLSLPITKHNVLVRSALELRDVIPDAFRIAASGRPGPVLVDVP
                     KDVQTELVDVDLLPEPGRAEPPPLCPADDLLRAAAMINAAQKPLLLIGAGIIAAGGSK
                     DLRRLMEKASIPAAATLLALGALPHDHPLYLGMVGMHAARFTNMLLDECDLLVGLGVR
                     FDDRATGKAAEFCPRAKILHIDIDPSELGKIKQPSLGLVADVGDALKALTPMIAANRR
                     CQWKQHIDTVRARYSLAMPGADDPLRPYGIVRTVASLLPDDSIVTTDVGQHQMWVAQA
                     YPFKRPRQWLTSGGLGTMGFGLPAAIGAALACPGRTVACFSGDGSLLMNLHELATAAE
                     EGVEVKIILLNNSHLGMVRQQQQLFYGGRYHASHLKSHTDFAAIARGFGVRAVDLGQT
                     ENPAAAIAEALRHPGPCLINVPIASDENVYPMVPPGGANRDMITGERCDNEQSGANNS
                     "
BASE COUNT          537 a          786 c          731 g          558 t
ORIGIN      
        1 ggttggaaga tcacctctcc ttaagttcat cagtaactgc aactcgctga tggtccaaac
       61 agtgcctaat gagctaagag tcacctttgg ctaattgttt ttccaaaaca gcatttaaag
      121 taacaataag cggcttggcc cgctgtactc tctcggcctt gggctactga tctagacctg
      181 accccgactt ctgacctgac cctttgttgc acagatcgat cgcgttcggc gagggcgctt
      241 gcctgcgtga agcgccaaga cagaacgaat tagcgttgca ctgccgccgt ctcctttatt
      301 attcattgtg gcgatagaga tcgtggagat tggtttcgtc tcgaacttac actaccggac
      361 aagaactgag cccgaataaa tcactccgat ttgcggcggg atccatttga tgctagtttc
      421 caatcatgtt caccgctgag acttacaagc cgcttgcgtt aaaggccctg cctttgcatt
      481 tcgtagtcgt agtcgtctta gtaaacgagg ctttcgcgtc gtagcgggaa aattgtaaac
      541 aattttttaa acccctgccg gcgcgatggc cgacgggggt tttgtttttt tggcccaccc
      601 accgtctccg caagccgcgc agggagcaaa tccagatagg agagctccca tgcaactaac
      661 aggtgcccaa ctcattaccg cgctcctaga gcgccaaggc gtcacaacaa ttgccggcat
      721 ccccggcggc gcgaacctac ccctgtacga tgcgctgcaa gccagttcga ttcgccatat
      781 attggcgcgt cacgaacaag gcgcgggatt catcgcacag ggaatggcac gggtcaccgg
      841 ccggccggcg gtgtgccttg ccacctctgg gcccggcgcc accaacctgc tcacagccat
      901 cgctgatgcc aagttggatt cgattccgct ggtggcaatt accggccagg ttccccgcaa
      961 catgatcggc accgacgcct tccaagaggt cgacaccttt gggctcagct tgccgattac
     1021 caaacacaat gttttggtcc gttccgccct ggagttgcgc gacgtcattc ccgatgcttt
     1081 tcgtatcgcg gcgtccggcc gaccggggcc cgtgctggtg gacgttccga aggacgtgca
     1141 gaccgaactg gtcgacgtgg atttgcttcc cgagcccgga cgagccgaac cgccgccgct
     1201 gtgccccgcc gacgatctgc ttcgggctgc cgccatgatc aatgcggcgc aaaaaccgct
     1261 gctgctgatc ggcgccggaa tcatcgcggc gggcggatcg aaagatctgc gtcgcttgat
     1321 ggaaaaggct tctattccag cggcggccac tttgctcgct ctgggcgcgt tgcctcatga
     1381 ccatcccctc taccttggca tggttggcat gcatgcggca cgctttacca acatgctgct
     1441 cgacgaatgc gatctgctgg tcggcctcgg agtacgcttc gacgaccgag ctactggcaa
     1501 agctgcggag ttctgtcccc gcgccaagat cctccacatc gacatcgacc caagcgagct
     1561 gggcaagatc aagcagccga gcttggggct ggtggccgat gtcggtgatg cgctgaaagc
     1621 tctgacaccg atgatcgcgg cgaataggcg atgccagtgg aagcaacata ttgacacggt
     1681 tcgcgcgcgc tactcgttgg cgatgcccgg cgcggacgat cctctgcgcc cttatggcat
     1741 tgtccgcacc gtcgcctctt tgttgcccga cgacagcatc gtcacgactg acgtgggaca
     1801 gcaccagatg tgggtggcgc aagcctatcc attcaagcgg ccacgccaat ggctcacttc
     1861 gggaggcctg ggcaccatgg gctttggcct ccccgccgcc atcggcgcgg cactcgcatg
     1921 tcctggccgc acggtcgctt gtttcagcgg cgacggcagc ttgctcatga acctgcacga
     1981 gcttgccacc gccgcggaag aaggcgtcga ggtcaaaatt atcctgctca acaactctca
     2041 cttgggaatg gtgcgccagc agcaacaact cttctatggc ggccgctatc atgcttctca
     2101 ccttaaaagc catacggact tcgccgcgat cgcccgtgga tttggcgtgc gcgccgtgga
     2161 tctcggacaa acagagaacc cggccgcggc catcgccgaa gcgctgcgcc atcccggccc
     2221 ttgcctcatc aacgtaccga tcgccagcga tgaaaatgtt taccccatgg tgccgccggg
     2281 cggggccaat cgtgacatga tcacgggcga gcgctgtgac aacgaacaat ccggtgcgaa
     2341 taactcttga acgtctaatg atggtaatga ctgtcgtcgt tatgtgagcg ccgattatcc
     2401 gtacgaatgc gaacgcgacc tgcggacgtt aaaggcgcgc atagacctga gagatgaatt
     2461 tcaagaaaat gctctgcgat aacccggcaa tgttttatcg cctgagtgaa ggcgacatgg
     2521 ccgcggcgcg gagggcgagg gggaattaga cttggatact cgaactaacg ctaaaaacgg
     2581 cgcagtgagt tttcactgcg ccatttttta gc
//
LOCUS       DATIRS010000701         3265 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1527560, whole genome shotgun sequence.
ACCESSION   DATIRS010000701 DATIRS010000000
VERSION     DATIRS010000701.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3265)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3265)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3265
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1527560"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            194..1870
                     /locus_tag="VLM90_08820"
     CDS             194..1870
                     /locus_tag="VLM90_08820"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13108.1"
                     /translation="MAYDLVIKNGKVIDGSGLPGFHGDVAISGGRIVEIGKVNGAARQ
                     TLNADGLVVAPGIIDNHTHYDAQVTWDPLCTYSCYHGITTVVMGNCSLAMAPAHREDR
                     AMLANVLSHVEAIPLEAIEAGVNWSWETIPEYLNALDQKLGINVAALIGHSAVRRYVM
                     GEASQERHATDEEVTAMKAIVREGLEAGAVGVSFERNLRHFDWNGRLAPTNLASEEEI
                     FAVAAVADEIGRGVIQFGGDRAISTRLAKASRRPVFYGNITQQAVAPDKWRKQLTEAE
                     NLMRQGHRGYQFVMPRPGDLRYTLKTAQHFDAMATWKNVMLLPLEQRKEVFRDPATRA
                     KLHFEAVESPLDPDRAGDFTRRWDLQFVFKPALAKNQHLTGKSVAEIAGELNKDVLDT
                     FLDLALEENFETEFERREVNSDQAAMTALLTSPYTVIGQSDGGAHVVFRTDYSYSTYL
                     LSHWVREKEIMSLEEAIRKLTFVPASLFGFSDRGLVRPGMAADLMIFDPTTISPLEPG
                     VAQDLPGGAKRRKQLAQGIEWTLVNGQVLMEHGQHTGAYPGKVARSAAAQ"
     gene            1937..2776
                     /locus_tag="VLM90_08825"
     CDS             1937..2776
                     /locus_tag="VLM90_08825"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSQ13109.1"
                     /translation="MADEKERIASLLVKARADLDDALFEMEKLPAVSQSAVNFAAHTL
                     GNFLSVTGGTAELLQLELADHPDPQVHKWLDALIRATELMTHTVSQLMNTAAGSEAQL
                     RFEKLDLRRLVRQSCSGYQRAADRKQIQLIIGAAASVDVPQVWTDPVALASVLDNLLA
                     NAVKYSFPGKRIWLNIFADEAGVVCRVRDEGPGLSAEDQTRLFEPGVRLTPRPTAGEV
                     STGYGLAVAKEWIEKLAGTIWCESQLGRGSCFFLRVPAYRQELHGTDPIARSGYWGGA
                     RPA"
     gene            complement(2857..>3265)
                     /locus_tag="VLM90_08830"
     CDS             complement(2857..>3265)
                     /locus_tag="VLM90_08830"
                     /inference="COORDINATES: protein motif:HMM:NF015817.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DbpA RNA binding domain-containing protein"
                     /protein_id="HSQ13110.1"
                     /translation="PVAEVEERREAPNNRFQREPRGGSYRTEQRGRASASPAYSRESA
                     KRTPAQRGGKDSHESGMVRLTLNVGKEHGIGPSDLVGTIAYHADIPGNAIGKIHIEGQ
                     KSFVDVPGALVPLVMKQVGKYKIRKQPVIVSLG"
BASE COUNT          661 a          947 c         1002 g          655 t
ORIGIN      
        1 ttgctctact aacctataat tagcgtacct ctgaataatc ctggttcaac cccaaatctt
       61 ttgtaatcgc agccgcgggt tgcgcgcttt catattgaca gatagtgggg catcgcatag
      121 gttcgctacg ggactgatcc aaaactgcac aggagcagag gtaacgctag gcctgcggcc
      181 tctaggagga acagtggcat acgatctagt tatcaagaac ggcaaggtga ttgacggttc
      241 cgggctgccg ggctttcatg gcgatgtcgc gattagcggc gggcggatcg tcgagatcgg
      301 caaggtaaat ggcgcggcgc gccaaaccct caacgccgat ggcttggtgg tggcgcccgg
      361 catcatcgat aatcacacgc actatgatgc ccaggtcacc tgggatccgc tgtgcactta
      421 ttcttgctat cacggcatta ccacggtggt gatgggcaac tgctcgctgg cgatggcgcc
      481 ggcgcatcgg gaagatcgcg cgatgctggc gaatgtcttg tcccatgtcg aagcgattcc
      541 gttggaagcg atcgaggccg gggtcaactg gtcatgggaa accattccgg aatatttgaa
      601 tgctctggac caaaagctcg gcatcaacgt cgctgcgctg atcggccact cggcggtgcg
      661 ccgttatgtg atgggcgaag cgtcgcagga gcgccatgcc accgatgaag aagtgacggc
      721 gatgaaggcg atcgtgcgcg agggattgga agccggcgct gtcggcgttt ccttcgagcg
      781 caacctgcgc cacttcgatt ggaacggccg gttggcgccg accaatctcg cttctgaaga
      841 agagattttc gccgtcgccg ccgtggcgga tgagatcggc cgcggggtga tccagtttgg
      901 cggcgaccga gcgatcagca ccaggctggc caaggccagc cggcggccgg ttttctacgg
      961 caacatcacg cagcaggcgg tggcgccgga caaatggcgc aaacagttga ccgaagcgga
     1021 aaatttaatg cgtcagggcc atcgcggcta tcaattcgtc atgccgcggc ccggcgatct
     1081 gcgttataca ctcaaaaccg cgcagcactt cgacgccatg gcgacgtgga aaaatgtcat
     1141 gttgttgccg ctcgaacaac gcaaagaagt cttccgcgac ccggcgaccc gcgccaagct
     1201 gcattttgaa gcggtcgagt cgcccctcga tcccgatcgc gccggcgact ttacccgccg
     1261 ctgggattta caatttgtct tcaaaccggc gctggcgaag aaccaacatc ttaccggcaa
     1321 gagcgtggcg gagattgccg gtgaactgaa caaggacgtg ctcgatacct tcctcgacct
     1381 ggcgctggag gaaaatttcg aaaccgagtt cgaacggcgc gaagtcaaca gcgaccaagc
     1441 ggccatgacc gcactgctca ccagtccgta caccgtcatc ggccagtcgg atggcggcgc
     1501 tcacgtggtt tttcgcactg actacagcta ctcgacttac ttgctgtcgc actgggtgcg
     1561 cgaaaaggaa atcatgtcgc tggaggaggc gatccgcaag ctcaccttcg tgccggcgtc
     1621 gctcttcgga ttctccgacc gcgggcttgt gcggccgggc atggccgccg acttgatgat
     1681 cttcgatccg acgaccatca gtccattgga gccaggcgta gcgcaggatc tgcctggcgg
     1741 agccaagcgc cgcaaacagc tcgctcaggg catcgagtgg accttggtca atggccaagt
     1801 cctgatggaa catggccaac ataccggcgc ttatccgggc aaagtggcgc gtagcgccgc
     1861 ggcgcaataa gcgccgtagc tagctggtcg cccggtcccg attctgtgat cgccggtagt
     1921 gagtcaaggg cagccgatgg cggatgaaaa agaacgaatc gcttcgttgc tcgtgaaggc
     1981 cagagccgac ttggacgatg cattgttcga gatggagaaa ttaccggcgg tcagtcagag
     2041 cgcggtcaat ttcgcggcgc acacgttagg caacttcctt tccgtcaccg gcggaaccgc
     2101 ggaattattg cagctggaat tggcggatca cccggacccg caagttcaca agtggctcga
     2161 tgccttgatc cgcgccactg aactcatgac gcacaccgta agccagctca tgaacaccgc
     2221 cgccggcagc gaagctcaac tgcgcttcga gaaattggac ttgcgcaggt tggtgcgcca
     2281 gtcgtgcagc ggttatcaaa gagctgccga ccgcaaacaa atccaactga ttatcggcgc
     2341 cgctgccagc gtcgacgtcc cgcaagtatg gacggatccg gtagcgctcg cctcggtact
     2401 cgacaatttg cttgccaatg ccgtcaaata ttcattcccc ggcaaacgca tctggctgaa
     2461 tattttcgcc gatgaagctg gggtagtctg tcgcgtgcgc gatgaaggac cgggtttgag
     2521 tgccgaagac caaaccaggc tgtttgagcc cggcgttaga ctcacccccc gtcccacggc
     2581 cggcgaggtt tcgacgggct acggcctggc ggtggccaag gagtggatcg aaaaattagc
     2641 cggaactatc tggtgtgaga gccaactggg gcgaggaagc tgtttctttc ttcgcgtacc
     2701 ggcctatcgg caagagctgc acggtacgga tcccattgct cgaagcggct actggggcgg
     2761 tgctcgaccg gcatgagctg acgcctgaca catgacgctg cagcgaactt ggaggtctat
     2821 cgcggcctga aaaacttctg cgctgctacc tttttcttac ccgagcgaga cgatcaccgg
     2881 ctgcttgcga atcttgtatt taccgacctg cttcatcacc agcggcacca gggccccggg
     2941 gacatcgacg aaggattttt ggccttcgat gtggatcttg ccgatggcgt tgccggggat
     3001 atcggcgtga taagcgatgg tgccgaccag gtcgctcggg ccgatgccat gttccttgcc
     3061 gacgttgagc gtcaatctta ccatcccgga ttcgtgagaa tctttgccgc cgcgctgcgc
     3121 cggcgtgcgc ttggctgact cgcgcgagta agccggcgag gccgacgccc ggccgcgctg
     3181 ctcggtgcgg taactgccgc ctcgcggttc gcgttggaaa cgattgttcg gcgcttcccg
     3241 tcgctcttct acttcggcca ccggg
//
LOCUS       DATIRS010000702         1942 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1429237, whole genome shotgun sequence.
ACCESSION   DATIRS010000702 DATIRS010000000
VERSION     DATIRS010000702.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1942)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1942)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1942
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1429237"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(2..919)
                     /locus_tag="VLM90_08835"
     CDS             complement(2..919)
                     /locus_tag="VLM90_08835"
                     /inference="COORDINATES: protein motif:HMM:NF014375.4"
                     /note="Presence of a B(12) (cobalamin)-binding domain
                     implies dependence on cobalamin itself, in one of its
                     several forms, or in some unusual lineages, dependence on
                     a cobalamin-like analog; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-dependent protein"
                     /protein_id="HSQ13111.1"
                     /translation="MAATLEKFAADASAEYFDAKQKRLAHAIVNGDHESSEQVTGELI
                     SAQQTLGDIYFKVVTPALQGVGESWCRGDIGVGEQKLATEIVIGQMDRLRAHFAPPAR
                     RSLYRVMVACIEGEQHFIGARMTADLCGARGWNVDFLGPNVPNEALVDMIHRRHPQVV
                     GLSVTMTQGIEHVRWVVGELAKSAPEVRMVIGGLAMVDNSSVKNLSRRCEIAKDIITG
                     VGLIGRLLRADRPNSVLKEYQMVLARRVRDLRTKRGWTQEHLAEVTQVARACIIAVEG
                     AKQNVSMDILVRMANALEVPPETLLSADG"
     gene            complement(968..1873)
                     /locus_tag="VLM90_08840"
     CDS             complement(968..1873)
                     /locus_tag="VLM90_08840"
                     /inference="COORDINATES: protein motif:HMM:TIGR01777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HSQ13112.1"
                     /translation="MKVVLTGAAGMIGAVLTERLWQINHSLVLLSRRPPAEISVAKKQ
                     WLVWQPGVSGEWERAIDGADAVINLAGEPIAGKRWTPKQKEILRSSRIDGTQALVGAI
                     AKAQVKPKLMISASAVGYYGPHGDEALNEDSKPGDDFLARLCVDWEAQAHMAEALGVR
                     VCLLRTGIVLAKGEGALKKMVPPFKMFTGGPLGSGRQWMPWIHIEDEVGLIQFLIENE
                     NGRGAFNGTAPNPVTMAEFSKTLGGVLNRPSWARVPPFVLALMVGEMAEMLLNGQRAI
                     PEAASKLGFKFKYPNLKLALESLGL"
BASE COUNT          431 a          629 c          474 g          408 t
ORIGIN      
        1 atcacccgtc cgctgacaac aatgtctccg gcggcacttc caaagcgttg gccatgcgca
       61 ccagaatatc catggaaaca ttttgcttgg cgccttcgac ggcgatgatg caggcgcgcg
      121 ccacctgagt cacctcggcc aggtgctctt gagtccatcc ccgttttgtc cgcaaatcgc
      181 gcacgcggcg cgccagcacc atttgatatt ctttgagcac tgaattgggc cgatcggcgc
      241 gcaacagccg gccgatcaag ccgacaccgg taatgatatc cttagcaatc tcacaacgcc
      301 ggctaagatt tttcacgctg gaattgtcga ccatcgccag tccgccaatg accatccgga
      361 cttcgggcgc cgactttgct aactcaccga ccacccaacg aacatgttca atcccctgcg
      421 tcatcgtcac cgacagcccg accacctgcg gatgacgccg atgaatcata tcgacgagcg
      481 cttcgttggg cacattggga ccgagaaagt cgacgttcca gccgcgtgcg ccgcataggt
      541 cggccgtcat gcgcgcgccg atgaaatgtt gctcgccttc gatgcaggct accattacgc
      601 ggtaaagcga gcgcctagct ggaggcgcaa agtgcgcacg caggcggtcc atctggccga
      661 tcacgatctc cgtcgccagt ttctgttcgc cgaccccgat atcgccacgg caccatgact
      721 cgccgacacc ctggagcgcc ggggtgacaa ctttgaaata aatatcgccg agcgtctgct
      781 gcgccgatat aagttcgccc gtgacctgct cggaactctc gtgatcgccg ttgacaatcg
      841 cgtgggccaa gcgcttttgc tttgcgtcga aatattcggc gctggcatcg gcagcaaatt
      901 tttccaaggt agcggccata ttcaaagcta aataaaatta atcgagattc ggcaatagac
      961 caaattgcta aagccccaac gactccaggg ccagcttaag attgggatat ttgaatttga
     1021 aaccgagctt gctcgccgcc tcgggaatcg ctcgctggcc gttgagcaac atctccgcca
     1081 tctcaccgac catcagcgcc agcacaaatg gcggcaccct ggcccacgac ggccggttca
     1141 atacgccacc cagagtcttg gaaaactctg ccatggtcac cggattgggc gcagtgccat
     1201 taaatgcgcc gcgcccgttc tcgttctcga ttaggaactg aatcaatccg acctcatctt
     1261 ctatatgaat ccacggcatc cactgccggc ccgaaccgag cggcccgccg gtaaacattt
     1321 tgaacggcgg caccatcttc tttaacgcac cctcgccttt ggccaagacg atgcccgtgc
     1381 gcagcaagca aacccgcaca ccaagcgctt ccgccatatg cgcttgcgct tcccaatcga
     1441 cacacaggcg cgcgagaaaa tcatcgccgg gtttactgtc ttcgttcaaa gcttcatcgc
     1501 catggggacc gtagtagccc actgccgatg cactgatcat taatttcggt ttgacctggg
     1561 ctttagcgat ggcacccacc aacgcttggg tcccatcaat gcggctggag cgcagaattt
     1621 ccttttgctt gggagtccat cgcttgccag caatcggctc acccgcaaga ttgatcaccg
     1681 catcggcacc gtcgatggca cgctcccact caccgctgac acccggctgc cacaccaacc
     1741 actgtttttt cgccacgcta atttccgccg gtggtctgcg gctcaacaag accagcgagt
     1801 gattaatctg ccacaaccgc tcggtcaaaa ccgcgccgat catgccagcg gccccggtaa
     1861 gtacgacttt catcgtgttg caatcccgct ctcaaaacag ctaagaactt ccactaaagt
     1921 aatatatagt tgacgtttct at
//
LOCUS       DATIRS010000703         1618 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_642632, whole genome shotgun sequence.
ACCESSION   DATIRS010000703 DATIRS010000000
VERSION     DATIRS010000703.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_642632"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            323..553
                     /locus_tag="VLM90_08845"
     CDS             323..553
                     /locus_tag="VLM90_08845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13113.1"
                     /translation="MDAKPLIQVGIACIFLGIVAFTYRGDADTSREQAAQIWTVQAGA
                     DAMQTLALSPLLAGLVLAGGIGLVALGIRKSA"
     gene            complement(642..1184)
                     /locus_tag="VLM90_08850"
     CDS             complement(642..1184)
                     /locus_tag="VLM90_08850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13114.1"
                     /translation="MVSATPSTAQASTPSEHQQRSGSLFEDGILTGMTGAAVVAVWFL
                     ILDTARGQMFLTPSLLGSVIFLGQSAEQAVSINPYIVFAYTGLHGVLFLIAGFAIARM
                     FAMFEHNPQFGIVILLLFLLFESILFSAAAAIFPNLIGTIGSVAVACGNLFAAVAMFG
                     FLIRRHPAAMNQLRLAWHEQ"
BASE COUNT          360 a          432 c          485 g          341 t
ORIGIN      
        1 ccaggatctt cgccgatgac cgagagagtg gcgcgttatt gcaagccgca tgactcgaac
       61 cgcgcatcga tcaagcatcg gaatacgagc ctggaagagt cttaggcata ggttgcgaaa
      121 tcctgggctg atcgagaaga atagcaatgg ctttttaacc gtccgggaaa gcgaactcac
      181 cggttacctg gcgcagattg cgtagcggcg gcgccgtggt attaatatct tgaatcgtgc
      241 cctcgccgcg cttaagatcc ggcgaatatg gcgaaggtga gccgataact gcttaaatgc
      301 ctatgaaggg aatgaagaat ccgtggatgc aaaaccgctg atacaagtcg gaattgcctg
      361 catttttctc ggcatcgttg ctttcaccta tcgcggcgat gccgatacta gccgcgaaca
      421 agccgcgcaa atctggacgg ttcaagccgg cgccgatgcg atgcaaacac tggcgctctc
      481 cccgctgttg gctggcttgg tgcttgcggg cgggatcggg ctggttgccc tcggaattag
      541 aaaatcagcc tagcgcgcga agtaacgatc tccagcgaat ctccgtgctg taacagcgaa
      601 ccggttagta ggaaacaagg ttatcgtaag ccgcggactc ctcactgttc atgccaggcc
      661 agccgcagtt ggttcatcgc ggccggatgg cgccggatca aaaacccgaa catcgcgacg
      721 gcggcgaaca ggttgccgca ggcgaccgcc acgctgccga tggttccgat gaggttggga
      781 aagatcgccg ccgcggccga aaatagaatc gattcaaata atagaaacaa taacaggatc
      841 acgatgccga actgcggatt gtgctcgaac atggcgaaca tccgggcgat ggcgaatccg
      901 gcgatgagaa aaagcacgcc atgcaggccg gtataggcga agacaatata gggattgatc
      961 gatacggcct gctccgcgct ctggccgaga aagatcacgc tgccgaggag cgacggcgtg
     1021 agaaacattt ggccgcgcgc ggtatcgagg atcaaaaacc agacggcgac taccgctgcg
     1081 ccggtcatac cggtgagaat cccatcttcg aataggcttc ctgaacgctg ctgatgctcg
     1141 ctgggcgtag acgcttgggc agtggagggc gttgcgctta ccatgggacc tccgtaagca
     1201 ccgagttttt tccaatgctg tttgggtgag gtgtcggtgc gccggtgccg cgatcaagct
     1261 gcgatttgat caccacgccg ggtgcttgct tttgcgttga tcgacgacgc cccgttaccg
     1321 attgagcgga gagataactc agcgcgggcg gcgatgtcaa gccgatctta ggcgattgtt
     1381 tcgttccctg catgccgtca ttgccgcaca tgtctgttcc cctgtagctg ctaccgcgtc
     1441 actcaacgct aacggacact atttgtacaa cgcgtcgatg aagccgctct tgtcgggggt
     1501 ttcgatgatg ccggcatcga ccacgttctg gtattttatc ccggccgctt ttgcagtgaa
     1561 ttggttactt cggcgatcac gtcgacgaat ccgtcacggg tcggagtttt caacgagg
//
LOCUS       DATIRS010000704         1699 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_741193, whole genome shotgun sequence.
ACCESSION   DATIRS010000704 DATIRS010000000
VERSION     DATIRS010000704.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1699
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_741193"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..696
                     /locus_tag="VLM90_08855"
     CDS             <1..696
                     /locus_tag="VLM90_08855"
                     /inference="COORDINATES: protein motif:HMM:NF024739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13115.1"
                     /translation="GVMARYRSPQLMAYPESYRDKDGIWNVSLLNVLVPAYNTRLVNK
                     EDAPQRLEDLLRPRWKGKMAMDSQSYYWFGALMQYLGEDVTIKLLRGLNEQNLHHVRG
                     RRLLTQLVAAGEYDLSVETNLNTVITMSQQGAPVWFAPLRPLFLRPSFLFMTRTAPHP
                     FAGALLIDYLLSEEGQRILAAHDRMPAHPKVPARETQLLKGLDVRMPDPLDIGRRYAA
                     LGKKYLELFPGAK"
     gene            780..1694
                     /locus_tag="VLM90_08860"
     CDS             780..1694
                     /locus_tag="VLM90_08860"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13116.1"
                     /translation="MPVYQAISTPDFGYLPTYVARAKNYFADERLDLKVIVMNSRVSV
                     PALIANEVHFGVAGPSITAALRGAPLKAIYFIYNTSTFQFTVRPEIRTAEDLKGKTIA
                     ISSPGATNDLATRLILVKLGLDPVRDVKFIAIGDAKARVIAMDQGQVAAAANNPDIAA
                     ELVRKGYRVLMHSGEVFPVPFSGTAVNDKLIRENPEMIKRWLRAHLRAMQLIRQRPDE
                     AAQIAAKDLKISLDIAREATAQVLQFMYPNDPGGFTEKGMKVLLQQTAPRLGVDPDKV
                     AIAQIADVSFLRDVQREMGIKCRDGYGC"
BASE COUNT          345 a          503 c          502 g          349 t
ORIGIN      
        1 ggcgtgatgg cgcgctaccg ctcgccgcaa ctgatggcct atccagaatc ctaccgagac
       61 aaggatggga tttggaacgt gagtctattg aacgtgctcg tgccggctta caacacccga
      121 ttggtgaaca aggaagatgc gccgcagcgt ctcgaagatc tcctccggcc gcgctggaag
      181 ggcaagatgg cgatggacag ccagtcctac tactggtttg gcgcgctgat gcagtacctg
      241 ggtgaggacg ttactatcaa actcttgcgc ggcctcaacg agcagaactt gcaccatgtg
      301 cgcggccggc gtttacttac tcagttagtc gccgccggcg aatacgatct ctccgtggaa
      361 accaatctca acaccgtgat caccatgtcg caacagggcg cgccggtgtg gtttgcgccg
      421 ctacggccgt tgttcttgcg gccgagcttt ctgttcatga cgcgcaccgc gccccatccc
      481 tttgccggcg cgttgttgat cgattacttg ttatccgaag agggacaacg cattctcgcc
      541 gcgcatgacc gcatgccggc ccatcccaag gtgccggcgc gggaaaccca gctgctcaaa
      601 ggactcgacg tgcgcatgcc cgaccccctc gatatcggcc ggcgctacgc ggcactgggg
      661 aaaaaatatc tcgaactgtt tccgggagcg aaatgatgcc gcgttgttta actcttctgg
      721 cattcctaat tgtactattc ggcgctgata gcggttccgc gcaggcgccg aagggcgtga
      781 tgccggtcta ccaagcgatc tcgacgccgg actttggcta cctgccgacc tacgtcgccc
      841 gcgccaagaa ttatttcgcc gacgagcggc tcgatctcaa agtgatcgtc atgaactcac
      901 gggtgtcggt gccggcgctg atcgccaacg aagtccactt cggtgtcgcc gggccgtcga
      961 tcaccgcggc gctgcgcggc gcgccgctca aggcgatcta tttcatctac aatacctcga
     1021 cctttcagtt caccgtccgg ccggaaattc gcacggcgga ggatttgaaa ggcaagacta
     1081 tcgctatctc cagtccgggg gcgaccaatg atctggcgac ccgcttgatt ctggttaagc
     1141 tcggtctcga tcctgtgcgc gatgtcaaat tcatcgccat cggcgacgcc aaggcgcggg
     1201 tgatcgcgat ggatcaggga caggtcgcgg cggcggcgaa taatcccgac atcgccgcgg
     1261 agttggtgcg caagggctac cgcgttttga tgcattccgg cgaggtgttt ccggtgccgt
     1321 tttccggtac ggcggttaac gacaaactga ttcgcgaaaa tcccgaaatg atcaaacgtt
     1381 ggctgcgcgc ccatctgcgc gctatgcaac tgattcgcca acggcccgac gaggcggcgc
     1441 agatcgccgc caaagatttg aaaatcagtt tggacatcgc ccgcgaggcg accgcgcagg
     1501 tgctccaatt catgtatccc aacgatcccg gcggtttcac cgaaaagggt atgaaagtcc
     1561 ttttacaaca aaccgcgccg cgtctaggcg tagatcccga caaggtcgcc atcgcgcaga
     1621 tcgccgacgt cagttttttg cgagacgtgc agcgagagat gggaattaag tgccgagatg
     1681 ggtatggatg ctagaaggg
//
LOCUS       DATIRS010000705         5401 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1036081, whole genome shotgun sequence.
ACCESSION   DATIRS010000705 DATIRS010000000
VERSION     DATIRS010000705.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 5401)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5401)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5401
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1036081"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1759
                     /locus_tag="VLM90_08865"
     CDS             <1..1759
                     /locus_tag="VLM90_08865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13117.1"
                     /translation="RPAEGTLDVQVWKGGATKGGTPYPVKYRREVFLVAQSRKTVQFT
                     VDPDFISRPLTISFSSASGNAAREIDLRRYFSPAPVLLLINDSGSLPPIALGPTAQSR
                     LVALSLSELAADARALLGVSHVILYDQSLRDLSRPQLLALDTWLSAGGRMVIIGSLNY
                     ALYQEPVISRFLPVQVSGTRRIAFTPAHGKDEKVVTIADVWAQVSAPLKGQVLAQSQG
                     VPVLVEAARGRGKIIYLSLDIGRPPLSQWPGLAKYLQTLLAVGGVDEPVARAEWNDTI
                     FTQLITSPTFISTYVPYGSLFIVIVVYLLAIGLLSWVWQRGRLATMQTIISLFLLVTG
                     GSAVGYVYFSRGGQIPDGVLLSSTVLESDADGFVDAQANLALFSTQPRQYTLPMERGW
                     MEFTPLSNRPRGPQEAPVLSQEGGGVSRFQIPLREWDYRLFRLRYVDSFRLRAEFNAQ
                     GDKLTMKIDNQSGKDLLDCTLLLPGQRHPLGEIRRGARLDKEFSLAPPAGSNGAAGRT
                     ESVNLREVSFANKTRDILFHSSFFPRDGDSRWSSGAAVFFAWVKDPAPRVQVNDPRIQ
                     VQNYALFRAIIPLARGEEE"
     gene            1756..2502
                     /locus_tag="VLM90_08870"
     CDS             1756..2502
                     /locus_tag="VLM90_08870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13118.1"
                     /translation="MTRNPIWRESVAIYFAEGHGFQVYFYLLIILAPVEFFSLYIPSL
                     DAQMWSGSASLFKVCAVTAQFLLIYFSLRVANQEFAPWRFKPLRLWIRDEGQSVEAIG
                     RGQRDFLVTHVIISVLLLVPLLAWAGAIARTPPARIAGTMLLLLFYSLSYGVWGLVAL
                     ALWERRMENRQVFVRCLFATLVIITALFYGTINPVMFLVAFLSRQELAPLAIFGWQLP
                     ASWVHFGFHLFLGGAGYWLHRWALKKELVG"
     gene            2502..3917
                     /locus_tag="VLM90_08875"
     CDS             2502..3917
                     /locus_tag="VLM90_08875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13119.1"
                     /translation="MADATLVEQKFAELLRWERQKRREQILVLAAGVALALAVLLSPL
                     HVLLPWRGLRWIVPFVLLTGLAPLFFYDRHWRGVDATRALVELDRKLGLDERAVTAWE
                     LTGRGDRSAAAQLVFQQTEHRLRSIQPRSLFPRRLGWPAYTAVPLLLVWFALLWFDFD
                     QPFSQQPSAVAQSLAQQLREFARDFQEKAKAEGLRESLQLAQELAKVAEKNLAEKAND
                     EQLKKDLAGVKQKLDATGKSGQQNQAVGGAESEQSLKDLRAELEAARDMMNLPDGVKA
                     PQQWMDRLASMPQLRKQLDRERQQREDGKGLGQQALQSLLDRLDRQVAGALDRRALID
                     AQQFLEQMMQPGQGKENNQAAQMAGRGERDEAGDGEREKNHSNLPGKEPGKNDDNLRS
                     LPQFRADTRTQIKGQLGDGESSGVVFKGKPTPGKSELAPQAVVANYRRQAEQELNSEK
                     VPAALKETVRKYFLSLDDDKR"
     gene            4023..5027
                     /locus_tag="VLM90_08880"
     CDS             4023..5027
                     /locus_tag="VLM90_08880"
                     /inference="COORDINATES: protein motif:HMM:NF040105.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HSQ13120.1"
                     /translation="MESLVDIERRIDSARRTFADVKAEIARVIVGHEELIEQVFIALV
                     CGGHCLLEGVPGLGKTLMVRSLGEILSLSFSRIQFTPDLMPADITGTNMLTDDPSGRK
                     LFEFQRGPVFAHVVLADEINRATPKTQSALLEAMQEQGVTVGGKLHLLENPFMVLATQ
                     NPIEMEGTYPLPEAQVDRFFFKLILHYPNHTELTRIADLTTAAPPSPLREILDADGIL
                     QLRQWVREVPLADVVKDYAVRLIMSTHAQQEKNGGESLTQRYIMYGSSPRGLQSVILA
                     AKARALFAGRPNVSFEDIRAMLLPSLRHRLILNLEADADGVSSEKILAELITHVAEVA
                     "
     gene            5093..>5401
                     /locus_tag="VLM90_08885"
     CDS             5093..>5401
                     /locus_tag="VLM90_08885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13121.1"
                     /translation="MLKLAATARTKISRFARNDTHAEQIPGWIAATPESGPADRNLKP
                     ETFFDSNFLRRLERLHLIAKRLSWAGAKGEHAVSRKGFSLEFSDYRRYQRGDDLRYID
                     W"
BASE COUNT         1024 a         1549 c         1703 g         1125 t
ORIGIN      
        1 ccgcccggct gaaggcacgc ttgacgtgca ggtctggaag ggcggtgcga ccaagggcgg
       61 cacgccttat ccagtcaagt accggcgcga agtgtttctc gtcgcgcagt cgcgcaagac
      121 ggtccaattt accgtcgatc cggattttat cagccggccg ctaaccattt cattttccag
      181 cgctagcggc aatgccgcgc gcgagatcga tctgcggcgc tatttttcgc cggcgccggt
      241 gctgttgttg atcaacgata gcggctcgtt gccgcccatc gctctcgggc cgacggcgca
      301 aagccggcta gtcgcgcttt ccctaagcga actcgccgcc gatgcccggg cgctgctcgg
      361 cgtgtcccat gtgattctct acgatcaatc gctgcgcgat ctgtcgcggc cgcagttgct
      421 cgctctcgac acctggctca gcgccggcgg caggatggtc atcatcggca gtctcaacta
      481 tgcgctctac caggagccgg tgatcagccg ctttctgccg gtgcaggtca gcggcacccg
      541 gcgtatcgcc ttcacacccg cccatggcaa agacgagaaa gtcgtgacca tcgccgatgt
      601 ttgggcgcag gtgtcggcgc cgctcaaggg tcaagtgctg gcgcagtccc agggggtgcc
      661 ggtgctggtc gaagcggcac gcggccgcgg taagattatc tatctctcac tcgatatcgg
      721 ccggccgccg ttgtcgcagt ggccgggctt ggcgaaatat ctgcaaacgt tactggctgt
      781 gggcggtgtc gatgagccag tggcgcgggc ggagtggaat gacacgatct ttacgcagct
      841 gatcaccagc cccacgttca tttcgaccta tgtaccttat ggttcgctgt ttatcgtcat
      901 cgtggtctat ctcctggcga tcggattgct cagctgggta tggcagcgcg gccggctggc
      961 gacgatgcag acaatcattt ccctgttttt gttagtgacg gggggtagcg ccgtgggcta
     1021 tgtttatttt agccgcggcg gtcaaatccc cgacggtgtc ttgttgtcgt cgacggtgtt
     1081 ggagagcgac gccgacggct tcgtcgacgc ccaggctaat ctggcgttgt tttccaccca
     1141 gccgcgccag tataccctgc caatggagcg tggctggatg gagttcacgc cgctctcgaa
     1201 ccggccgcgc gggccgcagg aagcgccggt gttgagccaa gagggcggcg gcgtgagccg
     1261 cttccaaata ccgttgcgcg agtgggacta ccgtttgttt cgcctgcgct atgtcgacag
     1321 cttccgattg cgcgcggaat tcaacgctca aggcgataag ttgaccatga agatcgacaa
     1381 ccagagcggc aaggatttgc tcgactgcac gctactcttg ccggggcagc gccacccgtt
     1441 gggcgagatc cggcgcggcg cgcggttgga taaagaattt tctctggcgc cgccagccgg
     1501 cagtaacggc gcggcgggcc gcaccgagag cgttaacttg cgcgaagtga gttttgccaa
     1561 caagacccgc gacattttgt ttcattcgtc gttttttccg cgcgacggcg atagccggtg
     1621 gagcagcggc gcggcggtgt tcttcgcttg ggtaaaagat ccggcgccgc gggtgcaggt
     1681 caatgacccg cgcattcaag tccagaacta cgcgctgttt cgcgccatca tcccgcttgc
     1741 gcgcggggag gaagaatgac ccgcaatcca atctggcgcg aaagcgtcgc gatttacttc
     1801 gccgaggggc atggttttca ggtctatttt tatctgctca tcatcctcgc gccggtggag
     1861 tttttctcgt tgtacattcc gtctctcgac gcgcagatgt ggagcggctc ggcgagtttg
     1921 ttcaaagtct gcgccgtgac ggcgcagttc ctgctgattt atttttcctt gcgggtggcc
     1981 aatcaggagt tcgcgccctg gcgcttcaaa ccgctgcgtc tatggattcg cgacgaggga
     2041 caatcggttg aagcgatcgg tcgcggccaa cgggactttc tcgtcaccca tgtgattatc
     2101 tcggtgctgc tgcttgtgcc gttgttagcc tgggccggcg cgatcgcgcg cacgccgccc
     2161 gccagaatcg ccggcaccat gctgctgctc ttgttctact ccctcagcta tggcgtttgg
     2221 ggcctggtcg ctctggcact gtgggagcgg cgaatggaga accgccaggt gttcgttcgt
     2281 tgcctgttcg ccaccttggt cattatcacc gcgttgtttt atggaacgat taatccggtg
     2341 atgtttctcg tcgcctttct cagtcgccaa gaattggcgc ccttggcgat tttcggctgg
     2401 cagttgccgg cgagctgggt tcatttcggc tttcatctgt tcctcggcgg cgcaggttat
     2461 tggttgcacc gttgggcgct aaaaaaggaa ctggtcggat gatggcggat gcgactttag
     2521 ttgagcaaaa attcgccgag ctgttgcgct gggaacggca aaagcggcgc gagcagatac
     2581 tcgtcctcgc ggctggcgta gccttggctt tggcggttct gttgtcgccg ctgcatgttc
     2641 ttttaccttg gcgcgggctg cgctggattg ttccctttgt gttgctgact ggattagccc
     2701 cgctgttttt ctatgaccgg cactggcgcg gggtcgatgc gactcgggca ctagtcgaac
     2761 tagaccgcaa gctcggcttg gacgagcgcg cggtgacggc gtgggagctg accgggcgcg
     2821 gcgaccggag cgccgcggcg cagctggttt tccaacaaac cgaacaccgc ttgcgctcca
     2881 tccaaccgcg tagcctgttc cctcggcggt taggctggcc ggcttatacc gctgtgccgc
     2941 tgttgctggt ctggttcgcg ctgctgtggt ttgacttcga tcagccgttc tctcagcagc
     3001 cgtcggctgt ggcgcaaagc ttggcgcagc agctgcgcga gtttgcccgc gactttcaag
     3061 aaaaagctaa agccgaaggg ctgcgcgaaa gtttgcagct cgcccaagag ttggcaaagg
     3121 tcgcggagaa aaacctcgcc gagaaagcca acgacgaaca gctcaagaaa gatttggccg
     3181 gtgtgaagca aaagctcgac gcgacgggca agtccggtca gcaaaaccaa gcggtcggcg
     3241 gcgccgaaag cgagcaaagt ctcaaggatt taagagccga gctcgaggcg gcgcgcgaca
     3301 tgatgaacct tcccgacggc gtaaaggcgc cgcagcagtg gatggaccga ttagcttcaa
     3361 tgccgcagct gcgcaaacag ctcgaccgtg agcgccaaca gcgcgaagat ggcaaggggc
     3421 tgggacagca agcgttgcag tcgctgctcg atcgtctcga tcggcaggtg gccggggcct
     3481 tggaccggcg agcgcttatc gacgcgcaac aatttctcga acagatgatg caaccaggcc
     3541 aaggcaagga gaataaccag gccgcgcaga tggccggccg cggcgagcgc gatgaagccg
     3601 gcgacggcga gcgcgaaaaa aatcacagca acctgcccgg caaagaaccg gggaaaaacg
     3661 acgacaatct cagatcgctg ccgcagtttc gcgccgacac gcgcactcag atcaaaggac
     3721 agttgggcga cggcgagagc agcggtgtgg tgttcaaagg caagccgaca ccggggaaaa
     3781 gcgaactcgc gccgcaggca gtggtcgcca actaccggcg ccaggcggag caggaactca
     3841 attcggaaaa ggtgccggcg gcgctcaaag agacggtgcg aaaatatttt ctgtcgttgg
     3901 atgacgataa aagataggcg cgggtatgga aatggagtaa tggaatagcg gagtattgtt
     3961 ttcgcacgac tgcaccactc caatactcca tcacgccaat tctcagctga ggagagccgt
     4021 tcatggaatc gcttgtggat atcgaacgac gcatcgacag tgcgcggcgc actttcgccg
     4081 atgtcaaggc ggagatcgcc cgggtcatcg tcggccatga ggaattgatc gagcaggtgt
     4141 ttatcgcgct ggtgtgcggc ggccactgcc tgctcgaagg cgtgccaggt ctgggcaaga
     4201 cgctgatggt gcgcagcttg ggcgagattc taagcctgag tttttcgcgc attcagttca
     4261 cgcccgatct catgccggcg gatatcaccg gcaccaacat gctgaccgac gatccgtcgg
     4321 ggcgaaagct ttttgagttt cagcgcggtc cggtgttcgc ccacgtggtg ctcgccgacg
     4381 agatcaaccg ggcgacgccc aagacgcagt cggcgttgct cgaagcgatg caggagcaag
     4441 gcgtcaccgt cggcggcaag ctgcacctct tggagaatcc tttcatggtc ttggccacgc
     4501 aaaatcccat cgagatggaa ggcacctatc cgctgcccga ggcgcaggtg gaccggttct
     4561 ttttcaaatt gatcctgcac tatcccaacc atacggaatt aactcgcatc gccgatctga
     4621 ccacggcagc gccgccgtcg ccgctgcggg aaatactcga cgccgatggg attctgcaat
     4681 tgcgccagtg ggtgcgcgaa gtgccgctcg ccgatgtcgt caaggactac gcggtgcgcc
     4741 tgatcatgag tacccatgcc caacaggaga aaaacggcgg tgaatctttg acccagcgct
     4801 acatcatgta tggatcgagc ccgcgcggtt tacaaagcgt cattctcgcc gccaaggcgc
     4861 gggcgctgtt cgccggccgg cccaatgtct ctttcgaaga cattcgcgcc atgttgctgc
     4921 cgagtttgcg ccaccgcttg attctcaact tggaagccga cgccgacggc gtcagttcgg
     4981 aaaaaatcct ggctgaattg atcacccatg tggcggaagt ggcgtaaagg atatgcgttt
     5041 cgagtttcgc ggtactaagt tcgaatcaga acggcggcgg gttagcgcgg cgatgttgaa
     5101 gcttgctgcg acggccagga cgaagatttc tcgcttcgct cgaaatgaca cgcatgcaga
     5161 gcagattccc ggttggattg cagccacacc tgaaagcggc cccgcggacc gaaacttaaa
     5221 acccgaaact ttcttcgaca gcaatttcct gcgccggctc gaacggctcc atctgatcgc
     5281 caagcggctg agctgggcgg gcgcgaaggg cgagcatgcg gtgtcgcgca agggttttag
     5341 cctggagttt tccgattacc ggcgctacca gcgcggcgac gatctgcgct acatcgattg
     5401 g
//
LOCUS       DATIRS010000706         3551 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1527782, whole genome shotgun sequence.
ACCESSION   DATIRS010000706 DATIRS010000000
VERSION     DATIRS010000706.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3551
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1527782"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(104..778)
                     /locus_tag="VLM90_08890"
     CDS             complement(104..778)
                     /locus_tag="VLM90_08890"
                     /inference="COORDINATES: protein motif:HMM:NF022077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSQ13122.1"
                     /translation="MIESVAVDKPAPYSAPRPRVARAKLSPAPVFAVTSGKGGVGKTN
                     VVANLATALARSKRRVMAIDADLGLANLDLFLGVNPAHTLADFFSGASALDEIVVANR
                     DGILLLPGASGVAEITTLSRDQKNSLLTELDVMTDDLDLVLVDTGSGISDAVTYFTSA
                     AQEIVVVVTPELASITDAYALIKILVSAHGRKRFAILANNVADQAQARRLFDTLSGTA
                     LRFLNA"
     gene            complement(771..1817)
                     /locus_tag="VLM90_08895"
     CDS             complement(771..1817)
                     /locus_tag="VLM90_08895"
                     /inference="COORDINATES: protein motif:HMM:NF012662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13123.1"
                     /translation="MIPRRFWGRDMGEALRAVRGSLGADALISDTRNVPKDQGGGVEI
                     TALADGPVAPADSVAEPAADALASPAYPIAELRHELAGLKSILAWLAPGLNHQDQIVN
                     TLLAHGLTMELIGKLTETMQQVAGGDPRERWYQAIAQLIVTGGEIAAGRDRLALVGPT
                     GTGKTSSLIKLTVAALQDQRRSVGWIGMDHRSLAGSDPLAAYAAILCVPYQRAVDRKT
                     LKEALERLSDCVLVLIDTPGINPRDALSVKALAKSLHGLAEVRRTLVFSAVTPDKDLA
                     DWTSRLRPLGAQSLFFTKLDECRYFGPVVSTALNAGLPVSYLSLGQNLAGDLVVARPQ
                     VFASLLLTGVETDD"
     gene            complement(1807..>3551)
                     /locus_tag="VLM90_08900"
     CDS             complement(1807..>3551)
                     /locus_tag="VLM90_08900"
                     /inference="COORDINATES: protein motif:HMM:NF012973.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009306 - protein secretion [Evidence IEA];
                     GO_process: GO:0044780 - bacterial-type flagellum assembly
                     [Evidence IEA];
                     GO_process: GO:0071978 - bacterial-type
                     flagellum-dependent swarming motility [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HSQ13124.1"
                     /translation="QFVVAGNYAVGFIVFAILVIINFVVITKGVTRIAEVAARFTLDA
                     MPGKQMAIDADLNAGLINETEARQRRLRTQKEADFYGAMDGASKFVRGDAVAGLIILA
                     VNLLGGFFVGVMQKGMTAGDAAQLYSLLSIGDGLVSQIPALIVSTAAGMVVTRTSSGG
                     ELGIEIVKQLLWNPRALAVVAVVLALFIFVPGFPAMPFFLAAAAVGGAAYYMSQQDGI
                     EPLETIAESKPAGDKADEPARPQSVDLIELEVGYELIPLVDSEHGAVVERIRALRRQF
                     LSDKGFVVPQIHIRDNLRLTSKQYVILIKGVEAGKGELKPSRLLAMNASGAAHSADDL
                     LGEATQEPAFGLPALWISTNDRERAETLGYTVVDPETVLITHISELVKRYAPELLTRQ
                     DVQRLLDGLARENPKVVEELIPHHLTLGGVQKVLQNLLREEVPIRDLLSVVETLADYA
                     PTIKDTDELTEHVRQALARTITSAYRSPEGLIPVMTFDAHIERMIRERHQDGLSLEPQ
                     AAQRIMTAVQRSVESFTKRGQLPVFLAGTNVRRHLRQLISHYMPQVAVLSHNEIAAGV
                     KIQSLGIIRWGDDS"
BASE COUNT          708 a         1094 c         1080 g          669 t
ORIGIN      
        1 cccggcttga cggcgcatcc ggcgcctccg tcaccaccgt gcgcgcctgc gccatggcgc
       61 gcagcagttg cgggtcgcgc gggatccagc caagaaagtc gagctaggca ttgagaaagc
      121 gcagcgccgt gcccgacaag gtgtcgaaca agcgccgtgc ctgggcttgg tcagcaacgt
      181 tgttggcgag aatggcaaaa cgttttcgtc catgcgctga gaccaatatc ttaattaaag
      241 cgtaggcgtc ggtgatcgag gcgagctccg gggtgaccac cacgacgatt tcttgcgctg
      301 cgctggtaaa ataagtcacc gcgtcggaaa taccgctgcc ggtatcgacc agcacgagat
      361 cgaggtcatc ggtcatgaca tccaattcgg tcaataggga atttttttga tcgcggctca
      421 aagtcgtgat ttccgccacg ccgctggcgc cgggcaggag caagataccg tcgcggttgg
      481 cgacgacgat ttcgtcgagg gccgaggcgc cggagaaaaa gtccgccaag gtatgcgccg
      541 ggttgacccc gagaaacaaa tccaggttgg cgaggccgag gtcggcgtcg atcgccatga
      601 cccgtctttt tgagcgcgcc agcgcagtcg ccagattggc gaccacgttg gttttgccga
      661 ccccgccctt gccgctggtt acggcaaaca ccggcgccgg cgacaattta gcccgcgcaa
      721 cccgcgggcg cggcgcgcta tagggcgctg gcttgtcgac cgctacggat tcaatcatcg
      781 gtttcgactc ccgtcagtaa taaactggca aacacttgcg gccgagcgac caccagatcg
      841 ccggcaagat tctgtcccaa gctcaagtaa gaaaccggca gcccggcgtt aagcgccgtg
      901 ctcaccaccg gcccgaaata gcggcactca tcgagtttag tgaaaaatag cgattgcgcc
      961 cccaacggac gcaagcgcga cgtccaatcg gcgagatcct tgtcaggggt cacggcgcta
     1021 aacactaaag tgcggcgcac ctcggccaaa ccgtgcaacg atttggccag tgctttgacg
     1081 ctcagggcat cgcgcggatt gataccgggg gtatcgatca gcacgagcac acaatcgctc
     1141 aagcgctcga gtgcctcctt gagggttttg cgatccaccg cgcgctgata aggcacgcaa
     1201 agaatggcgg cataggcggc gagcggatcg ctgccggcga gactgcggtg atccatgccg
     1261 atccagccca ccgaacgtct ttggtcctgc aatgccgcaa ccgtgagttt gatcagactc
     1321 gaggttttac cggtgccggt ggggccaacc agggccaagc ggtcgcgtcc ggcggcgatt
     1381 tcgccgccag tgacgatcag ttgggcgatc gcctggtacc agcgttcgcg cgggtcgccg
     1441 ccagcgacct gttgcatggt ctcggtcagt ttaccgatca gttccatggt caagccatgg
     1501 gctaacaaag tgttgacgat ctggtcttga tgattgagtc ccggcgccag ccaagcgagt
     1561 atcgacttca agccagcgag ctcgtggcgc agctccgcga tcgggtacgc cgggctggcc
     1621 agtgcgtccg cggccggctc ggcgacgctg tcggctggcg ccaccggtcc atcggcaagc
     1681 gcggtgatct cgacaccgcc cccctggtct ttgggcacat ttctcgtgtc gctgatcagc
     1741 gcgtcggcgc cgagcgaacc acgcacggca cgcaacgcct cacccatgtc tcggccccaa
     1801 aatcgtctag gaatcatcgc cccacctgat gatgcctagg gattggatct tgacgccggc
     1861 ggcaatttcg ttatgcgaca agaccgcgac ctggggcatg taatggctga tcaattggcg
     1921 caaatgacgg cgcacgttag tgccggcgag aaacaccggc aactggccgc gcttggtaaa
     1981 actctccacc gagcgctgca ccgcggtcat gatgcgctgg gccgcctggg gttcgagaga
     2041 gagcccatct tggtggcgct cgcgaatcat ccgctcgatg tgggcatcga aagtcatcac
     2101 cggtatcagc ccctcggggc tgcgatacgc cgaggtgatc gtgcgcgcca gcgcctggcg
     2161 cacatgctcg gtcagctcat cggtgtcttt gatcgtcggc gcgtaatcgg ccagggtttc
     2221 gacgaccgac aacaaatcgc ggatcggcac ctcttcgcgc agcaaatttt gtaaaacttt
     2281 ttgcacgccg cccaaggtca ggtgatgggg aatcagttct tcgacgactt tgggattttc
     2341 cctggctagg ccgtcgagta accgttgcac gtcctggcga gtcagcagtt cgggcgcgta
     2401 gcgtttgacc aattcggaaa tatgcgtgat cagcacggtc tccgggtcga ccacggtgta
     2461 gcccaaagtt tccgcccgct cccggtcgtt ggtggaaatc cacagcgccg gcagaccaaa
     2521 agccggttct tgggttgcct cgccgagcaa atcgtcggcg ctgtgggccg cgccgctggc
     2581 gttcatggct agtaaccgcg acggctttaa ctcgcccttg ccggcctcga cacccttgat
     2641 caagattacg tattgtttgc tggtcaatcg gagattgtcg cggatatgga tctgcggcac
     2701 gacaaaaccc ttgtcgctta agaactggcg ccgcagcgcg cgaatccgtt ccaccaccgc
     2761 gccgtgttcg ctgtcgacca gcgggatcaa ctcgtaaccg acttcgagtt cgatcagatc
     2821 caccgattgc ggccgggccg gttcgtcggc tttgtcgccc gcgggcttgg actcggcaat
     2881 tgtctccagc ggttcgatgc cgtcctgctg cgacatgtaa taagccgcgc cgccaaccgc
     2941 cgcagcggcg agaaaaaatg gcatcgccgg aaagccgggg acaaagataa acagcgccag
     3001 caccaccgcg accacggcca gcgctctggg attccacagc agctgtttga cgatttctat
     3061 gccgagttcg ccgcccgacg acgtgcgcgt caccaccatg ccggcggcgg tggagacgat
     3121 cagcgccggg atctggctga ccaaaccatc accgatactg agtaagctat agagttgcgc
     3181 ggcgtctccc gcggtcatac ccttctgcat gacaccgacg aaaaaaccgc ccaacagatt
     3241 gaccgcgaga ataatcaaac cggcaaccgc gtcgccgcgc acgaacttgg acgcgccgtc
     3301 catggcgccg tagaaatcgg cttccttttg cgtccgcagg cggcgctggc gcgcttcggt
     3361 ttcattgatc aggccggcat tcagatcggc gtcgatggcc atctgcttgc caggcatggc
     3421 gtcgagcgtg aagcgcgctg ccacttcggc gatgcgcgtc acacctttgg tgataaccac
     3481 gaagttgatg atgaccagaa tcgcgaagac gatgaaacca acggcataat tgccggcgac
     3541 gacgaactgg c
//
LOCUS       DATIRS010000707         2685 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1330773, whole genome shotgun sequence.
ACCESSION   DATIRS010000707 DATIRS010000000
VERSION     DATIRS010000707.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2685
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1330773"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1239)
                     /gene="glgC"
                     /locus_tag="VLM90_08905"
     CDS             complement(<1..1239)
                     /gene="glgC"
                     /locus_tag="VLM90_08905"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: protein motif:HMM:NF002023.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008878 - glucose-1-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase"
                     /protein_id="HSQ13125.1"
                     /translation="MLYVLGVVMAGGRGERLYPLTQHRAKPAVPFGGRYRIIDFVLSN
                     FINSGILSIYVVTQFKAQSLLEHLDRGWRATDFLGEHFITPVPAQMRSGDDWYQGTAD
                     SVYQNLYLLERHKPTLVAVFGADHIYRMNVRQMIDAHNNKSAEVTVAAIPVKIEEASQ
                     YGVIEIDADWRIVGFEEKPNEPKSIPGEPGFALVSMGNYLFNNEVLIEALKANAANPA
                     SNHDFGRDLLPDFVAAGRMFAYDFRQNRVPSPSKGEEPSYWRDLGTIEAYYDASMDLC
                     SIDPSFNLYNRSWPLRTVGYADPPAKFVFDGADRQGMAVNSVVAEGTIISGSDVRNCI
                     VGRNVRIHSYSHIENSVIMDWVEIGRNCRIRNAIIDKANVIPAGTEIGYDLEKDRERY
                     FVSSTGIVVLGRGQRKTTWVM"
     gene            complement(1261..>2685)
                     /gene="glgA"
                     /locus_tag="VLM90_08910"
     CDS             complement(1261..>2685)
                     /gene="glgA"
                     /locus_tag="VLM90_08910"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: protein motif:HMM:NF001899.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004373 - glycogen (starch) synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase GlgA"
                     /protein_id="HSQ13126.1"
                     /translation="IASEANPFAKTGGLADVLGALSLALERFGHQVLLILPAYRGTLG
                     GEFSLQDSGMTFTIPVSDRQESASVLQTTIGNSVTVYLIRADKYFDREFLYGTQTQDF
                     PDNAERFVFFCRAALEILGTQPVDIVHAHDWQAALAIVFLKTQAARYHAAAGAKTVCT
                     IHNLAFQGQFGQSEWHLLNLDSRFFTPQILEFYGNINFLKGALVMADKITTVSPTYAQ
                     EIMTLEQGFGLEGLLRQRADDLVGILNGVDYGQWNPGTDPLISHRYDDNSLTVKRNCN
                     RSLRQQLGLPDQANTPVVAMISRLTAQKGFDLVQKIFPDLMQRDIQFVLLGSGEPRYE
                     AFFRGAAASYANRVAVRIGFDERLAHQIEAGADLFLMPSLYEPCGLNQMYSLKYATPP
                     IVRAVGGLKDSVQDYDPQSHSGNGFVFTDYDGDAMLAAIDRGLSAYSDKKAWTALQRR
                     AMAMDFSWQRSAQLYSDLYKTLLP"
BASE COUNT          578 a          738 c          797 g          572 t
ORIGIN      
        1 catgacccag gtggtttttc gctgcccgcg gccgagcacg acgatcccgg tggacgagac
       61 aaagtagcgc tcgcggtctt tttccaggtc gtagccgatc tctgtgccgg cgggaatcac
      121 attggccttg tcgatgatgg cgttgcggat ccggcagttc ctgccgatct ccacccaatc
      181 catgatcacc gagttttcga tgtggctgta gctatgaatg cgcacgttgc gcccgacaat
      241 gcagttgcgg acatcgctac cgctgatgat tgttccctcg gcgaccaccg aattgaccgc
      301 catgccttgg cggtcggccc catcgaagac gaacttcgcc ggcggatcgg cgtaacccac
      361 ggtgcgcagc ggccagctgc ggttatatag attgaatgac ggatcgatgg agcataggtc
      421 catgctggcg tcgtagtagg cttcgatggt gccgaggtcg cgccagtagc tcggttcttc
      481 gcccttggac gggcttggca cgcggttttg gcgaaaatca taggcgaaca tacggccggc
      541 agcgacgaaa tcgggcaaga gatcgcggcc aaaatcatga ttgctcgctg gattggcggc
      601 gttggctttc aaggcctcga tcaacacctc attgttaaat agataattac ccatggacac
      661 caaggcgaaa ccgggctcgc cgggaataga cttgggctca ttgggttttt cttcgaaacc
      721 gacaatccgc cagtcggcat cgatctcgat tacgccatac tgcgaggctt cttcgatctt
      781 taccggaatc gctgcgaccg tgacttcggc agacttgtta ttatgcgcgt caatcatctg
      841 ccggacgttc atccggtaaa tgtggtcggc gccgaacacg gctacgagcg tcggcttgtg
      901 ccgttcgagc aagtagagat tctgatacac cgagtcggca gtgccctggt accagtcatc
      961 gcccgagcgc atctgtgccg gcaccggcgt gataaaatgt tcgcccaaaa aatctgttgc
     1021 ccgccagccc cggtcgagat gttccaagag cgattgggcc ttgaattggg tgaccacgta
     1081 gatcgataga atgcccgaat tgatgaagtt cgacaggacg aaatcgatga tccgatagcg
     1141 gccgccgaaa ggaaccgccg gtttggcccg atgctgggtc aaggggtaga gccgctcgcc
     1201 gcgcccgccc gccatgacca cacctaatac gtacaacatc tctctcgctc catcctgctg
     1261 ttacggcaat agagttttat ataaatcgct gtaaagttgc gccgagcgct gccaggaaaa
     1321 atccattgcc atggcgcgac gctgcagcgc ggtccaagct tttttatcgc tgtaggcgga
     1381 taaaccgcga tcaatggcgg cgagcatggc gtcgccatcg taatcggtaa aaacgaatcc
     1441 gttgccgctg tggctctgag gatcatagtc ctgcacggaa tctttcagcc cgccgacggc
     1501 ccggacgatc ggcggggtcg cgtatttcaa actgtacatt tgattcaagc cgcagggctc
     1561 gtagagcgac ggcatcaaga atagatcggc gccggcctcg atctgatgcg ctagccgctc
     1621 gtcgaagccg atgcgcacgg cgacgcgatt ggcgtagctc gccgcggcgc cgcgaaaaaa
     1681 cgcttcatag cgcggttcgc cactgccgag caagacgaat tgaatgtcgc gttgcatcag
     1741 gtcggggaaa atcttttgca ccagatcgaa gcctttttgc gcggtcaacc gggagatcat
     1801 cgcgacgacg ggcgtattgg cttgatccgg caggccgagc tgttggcgca gggagcgatt
     1861 acagttgcgt ttgacagtta aactgttgtc gtcgtagcga tgggagatca atggatcggt
     1921 cccggggttc cactggccat agtcgacgcc attcaagatc cccacgagat cgtcagcgcg
     1981 ctggcgcagt aggccttcga ggccgaatcc ctgctccaga gtcataatct cctgggcata
     2041 ggttgggctc acagtggtta ttttatcggc cataaccagc gcgcccttga ggaaattaat
     2101 gttgccgtaa aactccaata tctgcggcgt gaaaaatctg ctgtcgagat tcaataaatg
     2161 ccactcggac tgcccaaatt ggccttggaa tgccaggttg tggatggtgc atacagtctt
     2221 cgcgccagcg gcggcgtggt accgcgccgc ttgggtcttc aaaaacacga tggccaaggc
     2281 ggcttgccag tcatgggcgt ggacgatgtc gaccggctgg gtgccgagga tttccaacgc
     2341 cgcgcggcaa aagaagacaa accgctcggc gttgtcggga aagtcttgag tctgtgtgcc
     2401 gtagagaaac tcgcggtcga aatatttatc ggcgcgaatg aggtagacgg tgactgaatt
     2461 gccgatagta gtttgaagta ccgatgccga ttcctgacga tcggacaccg gtatggtgaa
     2521 agtcatgccg ctgtcttgca gcgaaaattc gccgcccaga gttccacggt aagccgggag
     2581 gatcaataga acctgatggc cgaaccgctc cagcgccaag gacagcgctc ccaggacatc
     2641 ggccaaaccg ccggtcttgg cgaacgggtt ggcctcggat gcaat
//
LOCUS       DATIRS010000708         2459 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1919945, whole genome shotgun sequence.
ACCESSION   DATIRS010000708 DATIRS010000000
VERSION     DATIRS010000708.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2459
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1919945"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(81..344)
                     /gene="grxC"
                     /locus_tag="VLM90_08915"
     CDS             complement(81..344)
                     /gene="grxC"
                     /locus_tag="VLM90_08915"
                     /inference="COORDINATES: protein motif:HMM:TIGR02181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HSQ13127.1"
                     /translation="MAQVTIYTTNWCPYCTGAKALLRSKEIEFDEIDVTDDPEKRAAM
                     ERLSQRRTVPQIFIDGRAIGGYDDARMLDATGELDQLLGLAGN"
     gene            427..1023
                     /gene="coaE"
                     /locus_tag="VLM90_08920"
     CDS             427..1023
                     /gene="coaE"
                     /locus_tag="VLM90_08920"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: protein motif:HMM:TIGR00152.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HSQ13128.1"
                     /translation="MKLVGLTGGIASGKSTVAKILTKLGAAIVDADVLSREVVAPGHE
                     GWKEIVGNFGSEVLQTDQTLDRQKLRTLIFNNPDARKQLEAIIHPRVRALAERRIREH
                     GEAGYAVVVYEVPLLFEGNLQEWLRPVILVACDVEIQRQRLRQRDGLDAAAAQKHIDA
                     QMSLEEKRKLADYVIENDGSLADLESQVRAVLAKIEAT"
     gene            complement(1016..1576)
                     /gene="efp"
                     /locus_tag="VLM90_08925"
     CDS             complement(1016..1576)
                     /gene="efp"
                     /locus_tag="VLM90_08925"
                     /inference="COORDINATES: protein motif:HMM:TIGR00038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HSQ13129.1"
                     /translation="MVQATQLRPGMIIVHAGDLYRVTAVHHLTPGNKRGFMQTKMKSL
                     RTGIGTEYKFRSEDRVDQAILDNRQFQYLYAEGDLHTFMDTENYEQITLTADTIGELL
                     NYLLPNSMVGIEFHDGKPVGINPPSTVDLAVVDTEPSMKGATASASYKHAKLETGVTV
                     LVPPFIQIGDKVRVDPTDGSYQERVK"
     gene            complement(1651..>2459)
                     /locus_tag="VLM90_08930"
     CDS             complement(1651..>2459)
                     /locus_tag="VLM90_08930"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HSQ13130.1"
                     /translation="TNEQVMAWMMDTYSQHKGHAVPEIVTGKPVAIGGTLGRREATGR
                     GVVYTILEAAKHLNIDLTKCTAVVQGFGNVGSVAAEELTNIGVKVIGIADRTGGFVDT
                     KGLPVDKLLQVASKNHSLEGCPYGDKLSNEELLELPCDILVPAAMEMQITKDNAARIQ
                     CRLLAEGANGPTTPEADTILRDKGIFVIPDILANAGGVVVSYFEWVQDLQNFFWTEEE
                     VTKKLRDILVKAFHEVLDMSQKQKVDMRMAALMIGIERVTKAMLWRGLYA"
BASE COUNT          507 a          714 c          688 g          550 t
ORIGIN      
        1 gtacgttgcc cggcctaccg cccgctagac cttgacgccc cagtgaactt atagatggcc
       61 gagagcatcg gcgaccattc tcagttcccg gcaagcccca acaattgatc aagctcaccg
      121 gtggcatcga gcatcctcgc atcatcataa ccgccgatgg cacggccatc gataaatatc
      181 tgtggcaccg tgcggcgctg ggacaggcgt tccattgcgg cacgtttttc tgggtcgtcg
      241 gtgacatcga tctcgtcgaa ctcgatttct ttagaccgca gcagcgcttt cgcgccggta
      301 cagtaggggc accagttggt ggtgtagatt gtcacttgcg ccatgtggtt ggtctccact
      361 cgaatctttt aaatcattct agaccttttg cttgaaagcc tctagccatt ttgtaattac
      421 tgtggcgtga aactcgttgg cttaactggc ggcatcgcct ctggcaagag tacggtggcg
      481 aaaattttaa ccaagcttgg cgcggcgatc gtcgacgccg acgtgctctc acgcgaagtg
      541 gtagcgccgg gtcatgaggg ctggaaagag atcgtcggaa acttcggcag cgaagttctg
      601 caaaccgacc aaaccctcga ccggcaaaag cttcgcaccc tcatcttcaa caatcctgac
      661 gcgcgcaaac agctcgaagc gatcatccac ccacgcgtgc gcgcgctggc cgaacgacgc
      721 attcgcgagc atggtgaagc cggctacgcc gtggtggttt acgaagtacc gctgctgttc
      781 gaaggcaatc tgcaagaatg gctgcgcccg gtgattctag tcgcctgcga tgtcgagatt
      841 caacgccagc ggctgcgcca acgcgatggt ctcgacgctg cggcggcgca gaagcatatt
      901 gacgcgcaga tgagtctgga agaaaaacga aagttagccg actacgtcat cgagaacgat
      961 ggcagcttgg cggatctgga atcccaagtg cgtgccgtgt tagcaaagat tgaagctact
     1021 tgacccgctc ctgatacgac ccgtcggtgg gatcgacacg caccttatcg ccgatctgaa
     1081 tgaacggcgg caccagcacc gtgaccccgg tctccaactt ggcgtgttta taggaagcgc
     1141 tcgcggtggc gcctttcatg gacggttcgg tgtcgacgac cgccaagtcg acggtggacg
     1201 gcgggttgat gcccactggc ttgccgtcgt ggaattcgat gccgaccatg gaattgggca
     1261 acaagtaatt cagcagttcg ccgatggtgt ctgcagtcag cgtgatctgc tcatagttct
     1321 cggtgtccat gaaggtatgc aggtcgcctt cggcgtagag gtactggaac tggcggttgt
     1381 ccaagatcgc ctgatcgacc cggtcctccg agcgaaactt gtattcagtc ccaatgccgg
     1441 tgcgcagact cttcatcttg gtctgcatga agccgcgctt gttgccggga gttaagtgat
     1501 ggacggcggt gacgcgatag agatcgcccg cgtgaacgat aatcatgccc ggccgcagtt
     1561 gagtcgcctg aaccatttct tcaatacctt cctatcgaga gtgtaaagtt gttaacagtt
     1621 tctcgccggc gcttcaatgc aggcgaaccg ctatgcgtag agcccgcgcc agagcatcgc
     1681 ctttgtcacc cgctcgatgc cgatcatgag cgcggccatg cgcatgtcga ccttctgctt
     1741 ctggctcatg tccagcacct cgtgaaaagc cttgacgagt atatcgcgca atttcttagt
     1801 gacctcctcc tcggtccaga aaaaattctg caagtcttgc acccactcaa agtaagacac
     1861 gaccaccccg ccggcgttgg cgagaatatc cggaatcacg aaaatccctt tgtcgcgcag
     1921 gatcgtatcg gcttccggcg tcgtcggacc attggcgcct tcggccaaca gccggcactg
     1981 aatgcgcgcg gcattgtctt tggtaatctg catttccatc gcggcgggaa ccaagatgtc
     2041 gcacggtagt tctaaaagtt cctcgttgct gagcttgtcg ccgtaggggc aaccttcgag
     2101 actatggttc ttgctggcga cctgcagcaa cttgtccacc ggcaaaccct tggtatcgac
     2161 gaatccgccg gtacggtcgg cgatgccgat gactttgacg ccgatgttgg tgagctcttc
     2221 agccgccacc gagccgacat tgccaaagcc ctgcaccacc gccgtgcatt tggtcaaatc
     2281 gatatttagg tgcttggccg cctctaggat tgtataaacc acgccccggc cggtcgcttc
     2341 acgccggccg agtgtgccgc cgatggccac cggcttgccg gtaacaatct ctggcacggc
     2401 gtggccttta tgctgagaat aggtatccat catccaagcc ataacttgct cgttggtac
//
LOCUS       DATIRS010000709         2472 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_150410, whole genome shotgun sequence.
ACCESSION   DATIRS010000709 DATIRS010000000
VERSION     DATIRS010000709.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2472
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150410"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..726)
                     /gene="murD"
                     /locus_tag="VLM90_08935"
     CDS             complement(<1..726)
                     /gene="murD"
                     /locus_tag="VLM90_08935"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008764 -
                     UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HSQ13131.1"
                     /translation="MELKAKKLLVIGLARTGRECARFLAQQGAKVWISDRRGQDDLRG
                     EMAALSDLSLTYRFGGEEKNWLDGMDYVVPSPGVPMENLLLREALARKIPVLSEIELA
                     YRFFAAPLVAITGTNGKSTTTTLIGKMLQADGKKVFLGGNLGAPFIGAVTGSWDWGVI
                     EISSFQLEWVDEFRPRIALLLNLTEDHLDRYASFSDYCQAKQRIFAAQQRADVEIINR
                     DDPLVWQLRERIAAHVVSFGFGEI"
     gene            complement(742..1818)
                     /gene="mraY"
                     /locus_tag="VLM90_08940"
     CDS             complement(742..1818)
                     /gene="mraY"
                     /locus_tag="VLM90_08940"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR00445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HSQ13132.1"
                     /translation="MLYHLFTSLSTSYSGFNVFRYITFRAAMAALLSLLISFLLGPWL
                     IRVLTERQIGQQIRDDGPASHAVKAGTPTMGGALIILALLFSTVMLADITNRYVLLAL
                     VATLGSGAVGFVDDYLKLTGKNSKGLAPRTKLLGQLAVALVVAVALYYQPKFSTEIAF
                     PFIKTLRVNLDVFYIPFAMLVIVGASNAVNLTDGLDGLAIGPVMVAAAAYAVVAYATG
                     HLKFAEYLQIPYVAGVGELTVFCAAMVAAGLGFLWYNAYPAQMFMGDVGSLALGAALG
                     IVAVLTKNEFLLVIIGGVFVMEALSVIFQVASYKIRRKRVFLMAPIHHHYELKGWKEP
                     QIIVRFWILSIIFAVIGLSTLKLR"
     gene            complement(1828..>2472)
                     /locus_tag="VLM90_08945"
     CDS             complement(1828..>2472)
                     /locus_tag="VLM90_08945"
                     /inference="COORDINATES: protein motif:HMM:NF014874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyanophycin synthetase"
                     /protein_id="HSQ13133.1"
                     /translation="AGQLRACSLRVRAGRGMAFALHYGDQQARINLNYLGRHNVTNAL
                     GAAALTLGAGVSLAAVRLGLAQAKPFTMRMQRESWRGIGIINDSYNANPGSMQAALET
                     LALIGNRGKKIAVLGDMFELGKQSAKEHRQLGRIAAQARIDRLYLLGDQAGAVRYGAL
                     RAGMKAHQVTIGADHGDLANRLRQQVGRGDWLLVKGSRGMKMEKVLQALKSVTV"
BASE COUNT          544 a          755 c          712 g          461 t
ORIGIN      
        1 gatttcgcca aagccgaagg agaccacatg tgcggcaatg cgctcgcgca gctgccatac
       61 cagcggatcg tcgcggttga tgatctccac gtcggcgcgt tgctgtgccg cgaagatgcg
      121 ctgcttggcc tggcagtagt cagagaaact ggcgtagcgg tccaagtgat cctcggtgag
      181 gttgagcaag agcgcgatgc gcgggcgaaa ctcgtcgacc cactccaatt gaaagctgct
      241 gatctcgatc acgccccaat cccaggagcc cgtcaccgcg ccgataaatg gcgcgcccaa
      301 gttgccgccg agaaaaactt tcttgccgtc agcctggagc atcttgccaa tcaaggtcgt
      361 cgtcgtgctc ttgccgttgg tgccggtgat cgccaccagc ggcgcggcga aaaagcgata
      421 ggccagttcg atttcgctca acaccggaat ttttcgcgcc agcgcttcgc gcagcagaag
      481 attttccatc ggcacaccag gactgggcac cacgtaatcc atgccgtcga gccaattttt
      541 ttcctcgccg ccgaaccgat aggttagcga aagatcgctg agcgcggcca tttcaccgcg
      601 cagatcgtct tgtccgcggc ggtcgctaat ccacaccttg gccccctgtt gggcgagaaa
      661 gcgcgcgcat tcccgtccgg tgcgcgccag accgatgacc aatagctttt ttgctttgag
      721 ctccattaaa catcgtcgcc gttatctgag tttcaaggta cttaaaccga tgaccgcaaa
      781 aatgatcgac aggatccaga agcgcacgat aatctgcggc tctttccagc ccttgagttc
      841 gtagtgatgg tgaatcggcg ccatcaagaa aacccgcttg cggcggatct tgtaggacgc
      901 cacttggaaa atcaccgaca gcgcttccat gacgaagacg ccgccgatga tcaccaagag
      961 aaattcgttc ttggtcagca ccgcgacgat gccaagggca gcgccgaggg ccagcgaacc
     1021 gacatcgccc atgaacatct gcgccggata ggcgttgtac caaagaaatc ccaatcccgc
     1081 cgcgaccatc gcggcgcaaa acaccgtcag ctcgccgaca ccggcgacat aggggatctg
     1141 caaatactcg gcaaacttga gatggccggt ggcataagcc accacggcgt aagccgccgc
     1201 ggcaaccatc accgggccga tcgccaggcc gtcgagacca tcggtgaggt tgaccgcgtt
     1261 ggaggcgccg acgatcacca gcatggcgaa cggaatgtag aaaacgtcga gattgacccg
     1321 cagtgtcttg ataaacggaa aggcgatctc ggtactgaat ttcggttgat agtacagcgc
     1381 cacggcgacc acgagggcga ccgcgagctg tcccaagagc ttggttcgcg gcgccagtcc
     1441 cttgctgttt ttgcccgtga gcttcaaata atcgtcgacg aagccgaccg ccccgctgcc
     1501 cagcgtggcg accaaggcca acagcacata gcgattggtg atatctgcca gcataacggt
     1561 cgagaacagc aaggctagga taatcagggc gccgcccatg gtcggcgtgc ccgccttgac
     1621 cgcatgggac gccggaccgt catcacgaat ctgttgaccg atctgtcttt cggtgagcac
     1681 acggattaac caggggccaa gcagaaacga aatcagcagg gacaataatg ccgccatcgc
     1741 cgcgcgaaag gtaatgtagc gaaagacatt gaagccggag tagctggtcg agagcgaggt
     1801 gaacaaatga taaagcacgc gatactccta gaccgtcacg ctcttgagcg cttgcaaaac
     1861 cttttccatt ttcatgccgc gcgatccttt gaccaaaagc caatcgccgc gcccgacctg
     1921 ttggcgcaag cggttggcca aatcgccgtg atcggcgccg atggtcacct ggtgcgcttt
     1981 catgccggcg cgcagcgcgc cgtaacgcac tgcgccggct tggtcgccga gcaaataaag
     2041 tcgatcgatc cgcgcttggg cggcgatccg gcccagttgg cgatgctctt tggcgctctg
     2101 cttaccgagc tcgaacatgt cgcccaacac ggcgattttt ttaccccggt tgccgatcag
     2161 cgccagggtt tccagcgccg cttgcatgga accggggtta gcgttgtagc tatcgttgat
     2221 aattccgatg ccacgccagc tttcccgctg catacgcatg gtgaagggtt tggcttgcgc
     2281 caaaccgagg cgcaccgccg ccaaactgac tcccgcgcca agcgtcaacg ccgcagcgcc
     2341 gagggcgttg gtgacattat gccggccgag ataattcaaa ttgatccgcg cttgttgatc
     2401 gccatagtgg agcgcgaagg ccatgccccg gccagcgcgc acgcgtaacg agcacgcgcg
     2461 cagctggccg gc
//
LOCUS       DATIRS010000710         1699 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_347815, whole genome shotgun sequence.
ACCESSION   DATIRS010000710 DATIRS010000000
VERSION     DATIRS010000710.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1699
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_347815"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..386)
                     /locus_tag="VLM90_08950"
     CDS             complement(<1..386)
                     /locus_tag="VLM90_08950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13134.1"
                     /translation="MTAYASRLRGFLASTQTSSALLSLAALPMAVILVLVVAMFWVSV
                     QKGALGTPSAIYTLANYREVFADPFIIGVVVNTLIFTVTATVVALLFGLPVAWLVERT
                     TLPGKTLLYAIMTLGLLIPGIYTAIG"
     gene            complement(493..1563)
                     /locus_tag="VLM90_08955"
     CDS             complement(493..1563)
                     /locus_tag="VLM90_08955"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ13135.1"
                     /translation="MIVKLAAVILTLACFGAQAEATTLAELIEGARKEGVLRGQWGQA
                     SFGGSEGFKEIVANMNKKYKLDLKGQYTPGPDMQALMLRIIQESAAGQPASTDVYLGN
                     AQAMLDALNGKVLRPMTYNQFIQDKPATEGKFNPIAADGTHVAVATAVVGVQYNTNAV
                     KGNDIPKRIDDVLNPKWKGKIASTPYAAGMREFATPDFLGREKMVDFTRKLSKQIGGL
                     MRCGEVERITSGEFIMLAFTCGGNDVNVAKRTGAPVGHSIMEEGTVLHMRYAGVPKNS
                     RSPNAGALLIHYLMSPEGQELLWRIDGLDLHLFPGSQTKRELDRVRAAKGKIIINSPE
                     WLASFKDYVAIQKELEGILRQK"
BASE COUNT          349 a          479 c          504 g          367 t
ORIGIN      
        1 cagccaatgg cggtgtagat tccgggaatg agcaagccga gcgtcataat tgcataaagc
       61 aaggtcttgc ccggcagtgt ggttcgttcc accagccagg ccaccggtaa gccaaaaagt
      121 aatgccacaa ctgtcgccgt gaccgtgaag atcagcgtgt taacgaccac gccgatgata
      181 aatgggtcgg caaacacttc gcggtaattg gccaacgtgt aaatagcgct gggagtgccc
      241 agggcgcctt tctgcacgct cacccaaaac atggcgacga ccaagacgag gatgaccgcc
      301 atcggcagcg cggccaggga cagcagcgcc gaagaagtct gcgtgctggc gagaaagccg
      361 cgcaatcgag aagcgtaagc ggtcatgaag attgatgtaa tggaatgatg gagtactgga
      421 gtaatgggtt cggaggggaa gggcggccca acactccatc attccattac tccaacactc
      481 cagcccgaat tattacttct gcctcagtat gccttccaac tctttctgga ttgcgacgta
      541 atctttaaac gacgccaacc actcgggcga gttgatgatg atcttgccct tggcggcgcg
      601 cacacggtca agttcgcgct tggtttgcga gccaggaaat agatgcaggt ccaagccatc
      661 gatgcgccag agcagctcct ggccctcggg gctcatgaga taatgaatca atagcgcgcc
      721 ggcgttgggc gagcgcgagt ttttcggcac gccggcatag cgcatatgca gcaccgtgcc
      781 ttcctccatg atcgaatggc ccaccggcgc gccggtgcgc ttggcgacat tgacgtcgtt
      841 gccgccgcag gtaaacgcca gcatgatgaa ctcgccgctg gtgatgcgct cgacttcgcc
      901 gcaacgcatc aggccgccga tctgtttgga cagcttgcgc gtgaaatcga ccattttctc
      961 ccggcccaag aaatccggcg tggcgaactc gcgcatgccg gcagcgtagg gggttgaggc
     1021 gattttgcct ttccacttgg gattgagcac gtcatcgatg cgtttgggaa tgtcgttgcc
     1081 cttgacggcg ttggtgttgt attgcacgcc gaccacggcg gtggcgaccg ccacgtgggt
     1141 gccgtcggcc gcgatcggat tgaatttacc ttcggtcgcg ggcttgtcct ggatgaattg
     1201 attataagtc attggcctga gcaccttgcc gttcagcgca tcgagcatcg cctgggcatt
     1261 gccgagatag acatcggtgc tcgccggttg gccggcggcg gattcttgaa tgatccgcag
     1321 catcaacgcc tgcatatcgg gacccggcgt gtactggcct ttcaaatcga gcttgtactt
     1381 cttgttcatg ttggcgacga tttccttgaa accttcgctg ccgccgaagc tcgcctggcc
     1441 ccattggccg cgcagaacgc cttctttgcg cgcgccttcg atcagttctg caagggttgt
     1501 ggcctcagcc tgagcgccga agcacgccag ggttaaaata actgctgcga gtttaacgat
     1561 catgacgagc ctcctgtaat ctaggggtcg cggcgggaaa agaccatgat gtccgcggcg
     1621 tccacggtaa attgtgtcca tccgttcttg cgctccggca gagtgcggtt cttgcccaat
     1681 aactggcggt cgttaacct
//
LOCUS       DATIRS010000711         2378 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1626131, whole genome shotgun sequence.
ACCESSION   DATIRS010000711 DATIRS010000000
VERSION     DATIRS010000711.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2378
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1626131"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..522)
                     /locus_tag="VLM90_08960"
     CDS             complement(<1..522)
                     /locus_tag="VLM90_08960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13136.1"
                     /translation="MGDVDGGAEFDYSRILRVVGQELEAKGISTCCLWVEANRVYVIG
                     LCTSSSGVVEAGFWQRLKSKNVAAGYTTTKLGYSIEGLMRLDELNRAKRSRAMPRADF
                     LRLSEQLRTVGAIVDRRGGQLIRLDRTAYEGMISSFTVQYKMVTGELVTEEFSAPSLY
                     DFSVQIFMMEKRRS"
     gene            complement(824..2062)
                     /locus_tag="VLM90_08965"
     CDS             complement(824..2062)
                     /locus_tag="VLM90_08965"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ13137.1"
                     /translation="MWFNWLVQFKIFEALRHPQYRLLWISHVFSAMGTWMDQVSRGWL
                     IYELTNSSFQLGLVRGVQALPILLLSPIAGSTADRYSRKSQVMVALVVDAFFYGLLAL
                     LIFAGSVQPWHVYASAVCMASVWTFQQPSRAAMVSDSVPPESLTNAIGLNAMMFNVAR
                     ITGPAVAGLIIAGWSSGGAYAVQALFYILAAIWNVKLRDDGNGLSSTHGQHDEGFIQS
                     IVEGWKFSWQNVEVRTGLLVVIWASLFIIPFNTLLPVFARDLLGVGAKGQGLLLTSMG
                     AGALASSVLIAALGDRMPRGILMIGGVGVYGLLVAVFAMSTSFSLSMVLMAVMGLCHV
                     ASHALVQTVIQAYSPREFRGRTMALFHQTHVILMAGGLIIGALASAIGAQWAAALMST
                     AGSVSMLALYLFSPRARQIR"
BASE COUNT          571 a          767 c          646 g          394 t
ORIGIN      
        1 cgaccggcgc ttttccatca tgaagatctg cactgaaaaa tcgtaaagac tcggggcgct
       61 aaattcttcc gttaccaact cgccggtgac cattttgtac tgcacggtga atgacgaaat
      121 catgccctcg taagccgtcc ggtcgagccg gatcaattgg ccgccgcgcc ggtcgacgat
      181 ggcgccgacg gtgcgcagtt gctcggagag cctgaggaaa tcggctcgcg gcatggcgcg
      241 gctacgcttc gcacggttga gttcgtcgag ccgcatcaac ccctcgatag aatagcccaa
      301 cttagtggtt gtatagcccg cggctacgtt cttcgacttg aggcgctgcc agaaccccgc
      361 ctcaacaaca ccgctgctgc tggtgcacag gccgatgaca tagacacggt tcgcttccac
      421 ccatagacag caagtggata tccccttggc ttcgagctcc tggccaacca cgcggagaat
      481 ccgtgagtag tcgaactccg cgccgccgtc gacatctccc aacctcaacc ttgtcttgac
      541 tatactgttt tgcatttcca tttttatctt ccccgctctg acaaactcaa tcggtgcgca
      601 cggcgataac tttaaccacg cggtaatacg atctcggcaa taaagttcac cagcgccgga
      661 gtttcgccac cgtcgaaaag ttgacggcac ggcagcgcca ttttgaccgc ggagacaacc
      721 cgcaagcgat atttcgcgga caaattgcgc agccatgagg gcgcggcggt tataccttag
      781 atgcaacttt aggaattcgg cttcaatgag atagccgggc aggctaacga atctgccgcg
      841 cccgcgggct gaacagatag agcgcgagca tggacaccga gccggcggtg ctcatcagag
      901 cggcggccca ttgcgcgcca atcgccgacg ccagcgcgcc aatgatcaag ccgccggcca
      961 tcaagatcac atgggtctgg tgaaacagcg ccatggtccg gccgcgaaac tccctcggcg
     1021 aataggcttg aatgaccgtc tgcaccaacg cgtgggatgc cacatgacac aaacccataa
     1081 ccgccatcag caccatcgat agcgaaaacg aggtcgacat ggcgaagacc gcgaccaaca
     1141 gcccgtacac gccgacgccg ccgatcatca gaataccgcg cggcatgcgg tcgcccaagg
     1201 cggcgatcag caccgagctg gcgagcgcgc cggcgcccat ggaggtcagc agcagtcctt
     1261 gtcctttggc gccgacgcca agcaagtcgc gcgcgaacac cggcaacagc gtattgaacg
     1321 gaataataaa caaggaagcc cagatcacca ccagcaatcc ggtgcgaacc tcgacgtttt
     1381 gccaactgaa cttccagcct tcgacgatgc tttgaataaa accctcgtca tgctggccgt
     1441 gggtgctgga caacccattg ccatcgtcgc gcaacttgac gttccagatc gccgccaaaa
     1501 tgtaaaacag cgcctgtacc gcataggcac cgccgctgct ccagccggcg atgattagac
     1561 ccgccaccgc cggaccggta atgcgcgcga cgttgaacat catcgcgttg agaccgatag
     1621 cattggtcag ggattccggc ggcacggagt cggaaaccat cgccgcccgc gacggctgct
     1681 gaaacgtcca caccgaagcc atgcagaccg cgctggcata gacatgccag ggttgcaccg
     1741 agccggcaaa gatcagcagc gccaacaagc catagaaaaa cgcgtccacc accaacgcca
     1801 ccatcacctg cgacttgcgc gagtagcggt cagcggtgct gccggcaatc ggcgatagca
     1861 gcaggatggg cagcgcttgc acgccacgca ccaaccccaa ctgaaacgaa gaattggtca
     1921 gctcgtagat cagccagccg cgcgacacct gatccatcca agtgcccatc gccgagaaca
     1981 catggctgat ccacaacaag cggtactgcg gatggcgcag cgcctcgaag attttgaatt
     2041 ggacaagcca gttaaaccac atggtaaatt aacgaaaact ccggcgcgca aattgtcgca
     2101 aggcctgcgc aagggtcaga tatattccgc taagcaaaac catgccagcg ctcatcgaaa
     2161 tcgccgtcca tcactccacg gcgcgatcgt gccgccacgc cgatgacggc aacggctggc
     2221 taacgaatat cgcgcgcccg cggcaccgtc acgaagattg ccaccataca cagcgtgccg
     2281 gcgatggcca tggacgatgc cgcccagggc gcgccgagca ccgcggaaag cgcgccgacg
     2341 atcatgccgc cgaccagcaa caatacctgg gtcatgtg
//
LOCUS       DATIRS010000712         1599 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_839889, whole genome shotgun sequence.
ACCESSION   DATIRS010000712 DATIRS010000000
VERSION     DATIRS010000712.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_839889"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(285..1292)
                     /locus_tag="VLM90_08970"
     CDS             complement(285..1292)
                     /locus_tag="VLM90_08970"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13138.1"
                     /translation="MKSQRAASKLLIIGLAVLLYGAALAQERPTLLVGHGTLSGSILP
                     MWIGAEAKLFDKHGIQVKPIYLPRAAGRPALLAGEIQIYFSAGPPLVQMRLSGGDVAI
                     TSCAAHKLTSKIMVVPAIQKAADLRGKVFAVANPGSASDFAAKLFLARQGLKAGQDVS
                     LIYSGSTSAAFAALVNGRVQAIFTTAPNDLQAAAAGFKSLLELGDLNIPYIGNCSAAM
                     RPYIAKQPGRMRAFVAGVTEAIAYIHRRPNEAKAVLEKYTRVSDPNILQHTYDSDTRF
                     MEPVPRPSIEGTKTVLEHLGVTGRPADQFVSEFIDDRFMKQIVDEGLLKQLYPGGIPA
                     R"
BASE COUNT          364 a          464 c          461 g          310 t
ORIGIN      
        1 caccttgaat ggtccaagcc gaaccgtccg cagagcaaaa ttacccacta agattattga
       61 aattctcggt acgcaatccc caggcaactg cgtcgttccc atgaatcgcg tgaaattcga
      121 aataacccag aggttcgatg ctctatcgat acgaccaaca atgctggccg gcaacctcgc
      181 gcccgcaccc ggcgcagatc catcagaaac tttttagcgt ttgatcgcga tgcacattca
      241 gtagaacaat ttttgccgtc gctgtgcatc cggcgaacag agggtcagcg cgccgggata
      301 ccgccggggt agagctgttt taacaaacct tcatcgacga tctgcttcat gaaccggtcg
      361 tcgatgaact cactgacaaa ctgatcggcg ggtcggccgg tgactcccag gtgttcgagg
      421 acggtcttgg tgccttcgat gctcggccgc ggcaccggct ccataaagcg ggtgtcggag
      481 tcgtaagtgt gttgcaaaat attcgggtcg gaaactcgag tgtatttttc caacaccgcc
      541 ttcgcctcat tggggcgtcg atggatatag gcgatcgctt cggtgacgcc ggcaacgaaa
      601 gcacgcatgc gcccgggctg cttggcgatg tacggccgca tcgccgcgct gcaattgccg
      661 atgtagggga tattcaagtc acccaattcg agcaacgatt taaaacccgc cgccgccgct
      721 tgtaagtcgt tcggcgcggt cgtgaagatt gcctgcaccc ggccgttgac cagcgccgcg
      781 aatgccgcgc tggttgaccc gctgtagatc agcgaaacat cctgaccggc tttcagcccc
      841 tggcgggcga ggaatagctt ggcggcaaaa tcgctggccg aaccggggtt ggcaacggca
      901 aatactttgc cgcgcagatc cgcggctttt tgaatcgccg gcacgaccat gatcttcgag
      961 gtcagcttat gcgccgcgca agaagtgatc gcgacgtcgc cgccgctcaa gcgcatctgc
     1021 accagcggcg gaccggcgga gaaataaatc tggatctcgc cggcgagcag cgccggccgg
     1081 ccggcggcac gcggcaaata gatcggcttg acctggatgc catgcttgtc gaatagcttg
     1141 gcctcggcgc cgatccacat cggcaagatc gatcccgaca gcgtcccatg accgaccagc
     1201 agggtcggcc gctcctgggc aagagccgcc ccgtagagaa gcacggccaa accaataatc
     1261 aacaatttgc tggcagcacg ctgggatttc atgggttagc ctccgtcatg ttgcgttcat
     1321 cgtctcagga aactcgcacc gtcggcgtga tcaaactaat ttcataacag atagcctatt
     1381 gggagagata gtttcaatcc tcgctctaag gatggaagag cgtaaccgtc ggcacgataa
     1441 gctagttgca gccggcaact actccaatcc tgctcgaaga gttgaaacct acgagcggca
     1501 gcgatgcaga tgcaaatcgg cacggccgat gagctaagcg gcgaaaagca aaacgctggg
     1561 cgcgctggac taccgaatgg tgagccggag aggaaccgg
//
LOCUS       DATIRS010000713         1899 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1823053, whole genome shotgun sequence.
ACCESSION   DATIRS010000713 DATIRS010000000
VERSION     DATIRS010000713.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1899
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1823053"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1465)
                     /locus_tag="VLM90_08975"
     CDS             complement(<1..1465)
                     /locus_tag="VLM90_08975"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ13139.1"
                     /translation="MGYFKDLREHIAALDKAGLLVKIDEQINKDTELMPLVRWQFRGL
                     PEDERRAFMFTNVVDAKGRKYDIPVVVGTLAATRQIYGFGLQCAPEEIVDRWNHAQSN
                     PIAPKIVDKAPVHEEVHIGASLLEHGALGEFPVPISTPGYDCAPFTTASHWFTKDPET
                     GLINVGTYRGHIKSPTRTGVFLSSSNHGGYHWRKCKERGIPLQAALVMGAPPCVAYTA
                     PSRIPFSVSELDVAGGLAGAAIEVVKCKTNDILVPANAEIVIEGEISTEFLEPEAPFG
                     ESTGYIAEKLLNPYFEVKCITHRKNPILATIISQMPPSESSVMRQVAAEGNYLRFLRD
                     QCNIPGIIEVAFHSIAVRQICVIKMKKINQAHVWQVLHSMVGYNPATGKMVIAVDEDI
                     NPRNLDSLFWAMAFRMQPHRDVLIIRNRTPQMDPSVFPQGHEQGLSVDEIAGSSAMLM
                     DATRKWAYPPVSLPKKEYMERAKQLWERLELPKLKPQD"
     gene            complement(1645..>1899)
                     /locus_tag="VLM90_08980"
     CDS             complement(1645..>1899)
                     /locus_tag="VLM90_08980"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HSQ13140.1"
                     /translation="LIDHGMTPQQAIAAARFNHLDGLKVGLEPDVPQAVKDDLARRGH
                     QISGGNPESFGGAHMILIHPESGAFVGGSDPRKGGCALGF"
BASE COUNT          383 a          561 c          542 g          413 t
ORIGIN      
        1 gatcctgcgg tttcaacttg ggcagctcca aacgctccca gagctgcttg gcgcgttcca
       61 tgtattcttt cttcggcaac gacaccggcg ggtaggccca ctttcgcgtc gcgtccatca
      121 gcatcgccga ggaaccggcg atttcatcga cggacagtcc ctgttcatgc ccttgaggaa
      181 acaccgacgg gtccatctgc ggcgtgcggt tgcggatgat caaaacatcg cggtgcggct
      241 gcatgcggaa cgccatcgcc caaaacagcg aatcgagatt gcgcgggttg atgtcctcat
      301 cgacggcgat gaccatcttg ccggtggccg gattgtagcc gaccatgctg tgcagcacct
      361 gccagacatg ggcctggttg atctttttca tcttgatgac gcagatctgg cgcaccgcga
      421 tgctatgaaa ggccacctcg atgatgccgg ggatattgca ctgatcgcgc aggaagcgca
      481 ggtagtttcc ttcggcagca acttggcgca tgacgctcga ctcgctcggc ggcatctggc
      541 tgatgatcgt cgctaaaatc ggattcttcc gatgcgtgat gcatttcact tcgaagtaag
      601 gatttaaaag tttctcggca atgtaacctg tggactcgcc gaacggcgct tcgggttcga
      661 gaaactccgt ggagatttca ccttcgatga cgatctcggc gttggcggga accagaatgt
      721 cattggtttt gcatttcacc acttcgatgg ccgctccggc caagccgccg gcgacgtcga
      781 gttcgctcac gctgaaagga atccgcgacg gcgcggtgta agcgacgcaa ggcggcgcgc
      841 ccatgaccag cgctgcctgc agcggaatgc cgcgctcttt gcacttgcgc caatgatatc
      901 cgccatgatt gctcgagctc agaaacacgc cggtgcgcgt cgggctcttg atatggccgc
      961 ggtaagtgcc gacgttgatc aggccggtct cgggatcttt ggtgaaccaa tgcgacgccg
     1021 tggtaaacgg cgcgcaatcg tagcccggcg tggatatcgg cactgggaac tcacccaagg
     1081 cgccatgctc caatagcgaa gcgccgatgt ggacttcttc atgcaccggc gccttgtcga
     1141 caatcttcgg cgcgatcgga ttgctctgcg cgtgattcca ccgatcgaca atttcttccg
     1201 gcgcgcactg caatccgaag ccataaattt gccgcgtcgc cgccagggtt ccgaccacca
     1261 cgggaatatc gtacttgcgc cctttggcat cgacgacatt ggtaaacata aacgcgcgcc
     1321 gctcgtcctc cggcagaccg cgaaactgcc agcgcaccag cggcatcagc tcggtgtctt
     1381 tgttgatctg ctcgtcgatc ttgaccagca gcccggcctt gtcgagcgcc gcgatatgtt
     1441 cccgcaagtc tttgaaataa cccatgacag aatctccttg agcgaattct tgtcagtggt
     1501 gatatttgat ttcggatgag attgccagaa gcggactcgg acattactct cgcaaaggcg
     1561 ccaagacgct aagtccggaa aggaattagt ttcttaaaac cttcgcgcct ttgcgccttt
     1621 gcgaggaata ttccgagatt caaatcagaa tcccagcgcg cagccgccct tgcgcgggtc
     1681 ggagccgccg acaaaggcgc cggactcggg gtggatgaga atcatatgcg cgccgccgaa
     1741 actctccggg ttgccaccgg agatttgatg gccgcgacgc gccagatcat ctttgactgc
     1801 ttgcggaaca tccggctcca agcccacttt caatccatcg agatgattga agcgtgccgc
     1861 cgcgatcgcc tgctgcggcg tcatgccgtg atcgataag
//
LOCUS       DATIRS010000714         1508 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_643267, whole genome shotgun sequence.
ACCESSION   DATIRS010000714 DATIRS010000000
VERSION     DATIRS010000714.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1508
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_643267"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..352
                     /locus_tag="VLM90_08985"
     CDS             <1..352
                     /locus_tag="VLM90_08985"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13141.1"
                     /translation="IHEQFPKLRFGFIEASAQWVPWVMHEAKNRFKTLGRPWPANLLK
                     EYGMFVTCENSDDIPYVVREAGEDNLVIGTDYGHTDISSDVDAIRIFRERKDLSPGVK
                     QKILSDNARALYAL"
     gene            381..1355
                     /locus_tag="VLM90_08990"
     CDS             381..1355
                     /locus_tag="VLM90_08990"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13142.1"
                     /translation="MSRGVFCLLFIFAGLAAPGDAAAQPAAKKVRLGIQSNNIGFLPF
                     HLAYHKGYYREQGIDLETIFMATQAVNAAFVRGDIDYSAAINGVIQTIVRGNSARILA
                     VAVDRPLISLIARKEIRTAQDLKGKKIGGSTPGGTATLMADTALKHLGFQAGRDVTIV
                     PLRENRLAALDSAAVDAALLGVPENILAVDRGYNELLFVGDIVNFPQNAIGVATRRIQ
                     ENPDEVYGMVRAALRALYFALEPRNRDEVVAIVMKQWKLTDRRIATEMLRQFNRGMAR
                     DLMAKPEGMQLMIDLVREDSKVAQPFALSQVVDYSFVEKARRDLGASR"
BASE COUNT          333 a          463 c          416 g          296 t
ORIGIN      
        1 gattcacgag cagttcccca aactgcgttt tggcttcatc gaagccagcg cccagtgggt
       61 gccctgggtc atgcacgaag ccaagaaccg tttcaaaacc ttgggccgcc catggccggc
      121 taacttgctc aaagagtacg gtatgttcgt gacctgcgaa aattctgacg acattcccta
      181 cgtcgtccgc gaagccggcg aggacaatct ggtcatcggc accgactacg gccacaccga
      241 catctcgagc gatgtcgacg cgatccgcat ttttcgcgag cggaaagatt tgtcaccggg
      301 ggtcaagcaa aaaatcttga gcgataacgc ccgcgcgctt tacgcactgt gacaacgact
      361 gcacaacgaa agggaaaacg atgagccgcg gcgttttttg cctcttgttc atttttgccg
      421 gtctcgctgc gccgggcgat gccgcggccc aaccggcagc gaaaaaagtc cgcctcggca
      481 tccagtccaa caacatcggt tttctaccgt ttcatctcgc ttatcataaa ggttactacc
      541 gcgagcaggg catcgaccta gagaccattt tcatggcgac tcaggcggtc aacgcggcgt
      601 ttgtgcgcgg cgatatcgat tatagcgccg ccatcaacgg cgtcatccag accatcgtgc
      661 gcggcaattc ggcgaggata ctcgctgtcg ctgtcgaccg gccgttgatt tcactcatcg
      721 cgcgcaaaga aatccgcacg gcgcaagacc ttaaaggcaa aaaaatcggc ggcagcacgc
      781 ccggcggcac agcgactttg atggccgaca cggcgctcaa acacttgggc tttcaagctg
      841 gccgggacgt gaccatcgtg ccgctgcgcg agaatcgcct cgccgccctc gactcagcgg
      901 cggttgacgc ggcgctgctc ggcgtaccgg aaaatattct tgccgtcgac cgcggctaca
      961 acgaactgct cttcgtcggc gacatcgtga attttcccca gaacgccatc ggtgttgcga
     1021 cccggcgaat tcaagaaaat ccagacgaag tctacggcat ggtgcgcgcc gcgctgcgcg
     1081 cgctctattt cgcactggag ccgcgcaacc gcgatgaagt cgtcgccatc gtcatgaaac
     1141 agtggaaact caccgaccgg cgcatcgcca ccgaaatgct gcggcagttt aaccgcggca
     1201 tggcccgcga cctgatggca aagccggaag gcatgcaact gatgatcgat ttggtgcgcg
     1261 aagattcaaa agtcgcccag ccctttgcgc tttcccaagt ggtcgattac agcttcgtcg
     1321 aaaaagcccg ccgcgacctt ggcgctagcc gttgatgcgg ttgacgcaac gatcctaact
     1381 aatctcacca cgaagtgtcc atgagcttgc gctcgtctac agagtatgaa attgcagccc
     1441 ccagcaccac atggttcttc ccttaattcg tcatgccggc gcaggccggc aggggagggg
     1501 atggatac
//
LOCUS       DATIRS010000715         1507 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1135418, whole genome shotgun sequence.
ACCESSION   DATIRS010000715 DATIRS010000000
VERSION     DATIRS010000715.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1135418"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..219)
                     /locus_tag="VLM90_08995"
     CDS             complement(<1..219)
                     /locus_tag="VLM90_08995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13143.1"
                     /translation="MTASIGHGSILIAFAAALIGIMSPIVAARSASERFRWVAGYAIL
                     GQFVFVTVAAAALIYGLVTTDFSIKYVAF"
     gene            complement(216..659)
                     /gene="ccmE"
                     /locus_tag="VLM90_09000"
     CDS             complement(216..659)
                     /gene="ccmE"
                     /locus_tag="VLM90_09000"
                     /inference="COORDINATES: protein motif:HMM:NF009727.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HSQ13144.1"
                     /translation="MTKAKRFLIGGGVILAALAYIIYGGMQEALVYFKMPSELRAEEK
                     SMQGKFVRMGGMVVKGSMEKDLQNLTYKFQITDGNTNFPVYFKGVPPDLFVEGKGAVV
                     EGRVENDGVFHATTIMAKHAEDYSPHADGTAASKSFIPAKEAGAK"
     gene            complement(646..801)
                     /locus_tag="VLM90_09005"
     CDS             complement(646..801)
                     /locus_tag="VLM90_09005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13145.1"
                     /translation="MGAWGYVSLAYGIVWGVIVVYWFVLKRRYRAAETELNRLRSSEA
                     AGSYDKS"
     gene            complement(801..>1507)
                     /gene="ccmC"
                     /locus_tag="VLM90_09010"
     CDS             complement(801..>1507)
                     /gene="ccmC"
                     /locus_tag="VLM90_09010"
                     /inference="COORDINATES: protein motif:HMM:TIGR01191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015232 - heme transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="heme ABC transporter permease CcmC"
                     /protein_id="HSQ13146.1"
                     /translation="AQSTNAIRKRKGILGGLAIVAIVTGLGWSLLVAPPDAYQGEVQR
                     IMYLHLPSILTAYLSYFLVFIGSGMYLWKREKKDDLLAHAAAELGVLFTALTIIEGSI
                     WGKPTWGVWWTWDARLTLTAILLLIYAGYLMLRSSIDDEQRAASAAAILGIIGFLDIP
                     LIHMSVYWWRTLHQPPSILRPDKAPWENVHPAMLTALAISFVGFLLLYFYLLSLRYRV
                     GEMRQEIKALRLERGV"
BASE COUNT          342 a          447 c          430 g          288 t
ORIGIN      
        1 gaaggcgacg tacttgatcg aaaagtcggt ggtcaccaga ccgtatatga gcgcggccgc
       61 agcgactgtg acgaaaacga attggcccag gatcgcgtag cccgccaccc agcgaaaacg
      121 ctcactggcc gaacgcgccg cgacgatcgg actcataatc ccaatcaacg ccgcggcgaa
      181 ggcgatgagg atcgagccgt ggcctatgct agcggtcact tggcgccggc ttccttggcg
      241 ggtataaagc tcttgctcgc cgccgtgccg tcggcgtggg gactatagtc ttcggcatgt
      301 ttggccatga tcgtggtggc gtgaaacacg ccgtcgtttt cgacccgccc ttcgaccacg
      361 gcgcctttgc cttcgacgaa caggtccggc ggcacccctt tgaaatagac cggaaagttg
      421 gtgttgccgt cggtgatttg gaatttgtac gtgaggtttt gcaaatcttt ttccatcgag
      481 cctttgacga ccatgccgcc catgcggaca aacttgcctt gcattgattt ttcttcagcg
      541 cgcagctctg agggcatctt gaaatagacc agggcctcct gcatgccgcc gtaaatgatg
      601 taggcgagcg cggcgaggat aacgccgccg ccgatcaaaa atcttttagc ttttgtcata
      661 actgccggcc gcctccgacg accttaagcg gttgagttcc gtttcggcgg cgcgatagcg
      721 ccgcttcaag acaaaccaat acacgacgat gacgccccaa acaattccgt aggccagcga
      781 gacatatccc caagcgccca tcagacccct cgctccaggc gcaaggcctt gatctcttgg
      841 cgcatctcgc cgacgcgata gcgcagcgat aacaaataaa aatagagcaa tagaaaaccg
      901 acgaagctga tcgccagggc ggtcaacatg gcgggatgga cgttctccca aggcgctttg
      961 tcggggcgca ggatcgaagg cggttggtgc agcgtgcgcc accagtagac cgacatgtga
     1021 atcagcggga tgtcgagaaa accgatgatt cccaaaatcg ccgcggcgga agcggcgcgc
     1081 tgctcgtcgt cgatggacga gcgcagcatc aaataaccgg cgtagatgag cagtaatata
     1141 gccgtcaacg tcagccgggc gtcccaagtc caccaaaccc cccaggtcgg tttgccccag
     1201 atcgagcctt cgatgatggt gagcgcggta aacagcacgc ccaactcggc cgccgcgtga
     1261 gcaagcaaat catccttctt ttcgcgcttc cacaaataca tgccgctgcc gatgaagacg
     1321 agaaaatagg acagataggc agtcaaaatg ctcggcaagt gcaggtacat gatgcgctgc
     1381 acttcgccct ggtaggcgtc gggcggcgca accagcaaac tccagcccag cccggtgacg
     1441 atggcgacga tcgccaggcc gccgagtata cctttgcgtt ttcttatcgc attcgtggac
     1501 tgcgcca
//
LOCUS       DATIRS010000716         3940 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_348072, whole genome shotgun sequence.
ACCESSION   DATIRS010000716 DATIRS010000000
VERSION     DATIRS010000716.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3940)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3940)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3940
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_348072"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..852)
                     /locus_tag="VLM90_09015"
     CDS             complement(<1..852)
                     /locus_tag="VLM90_09015"
                     /inference="COORDINATES: protein motif:HMM:NF014476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13147.1"
                     /translation="MTLILSNDDVDKALNVKDCLTIMEESYREQAASRAVNRPTCHSY
                     LPHALPNSTYSFKSVDGGVGKYGVLALRITSDVVQEQVVHGTVRLEKIPLAGKGLFVG
                     LVQLYSAATGELLAIMPDGLIQQTRVGVTSALGMKVMARKNSQTLGLIGSGGQAKAHY
                     RYMTAVMPLKRVKVFSPNPEHRKAFVAEMEKETGVAGEPVASPEESVRGCDVICSATN
                     SSRPVVKVDWLEAGMHYNSIREFENDLEVLNKCDPIAIHTQFGGIQHYQPPGIIEDMP
                     GVRREKPR"
     gene            1194..1670
                     /locus_tag="VLM90_09020"
     CDS             1194..1670
                     /locus_tag="VLM90_09020"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSQ13148.1"
                     /translation="MLQSQSRKSSQDSPPRELSLVIGPTEVADVMIAKVATLSTHHGF
                     DDAVRLMKDRHFRHCIVVDMQGKLCGVISDRDILRSMARDGHSRSKSLDQIMTRNPVT
                     VKRHTSILYAVSKIISKKINCLPVVEDDGTVCGIVTSTDLLKSYQQVLEMVHKQAG"
     gene            2051..3250
                     /locus_tag="VLM90_09025"
     CDS             2051..3250
                     /locus_tag="VLM90_09025"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ13149.1"
                     /translation="MSKAENIEAVSLPLANWGRLAANCTAHMTEHLFNAVVSVILPLI
                     TASLGLSLSQAGALASVRTLMAGVASFPSGFLADLASRRNLLLGGCIALIGVASLGLS
                     ASYSFQLLMVFMGLGGFGGGWFHPQSLAILSEKYRTQKAFALGVHDSSANLGEVIGPL
                     AIGLMLNFFDWRTALLFWAIPGLLVGAIYALVGAEGMLAVPRGRDYRKAIWNDVLKNK
                     TVCGLVAVSTLRAMGQTALASFLPLYLALHLQLPAAVTGAYMSILFLCAGVAPALVGW
                     VSDRIGHRYLIVLFSLLSVAMVVAIPHLGSGAVLVAGLGTLGALLWALRPVIVSAAMS
                     EAPQQLSGSIVALIYGANMGLSFLAPLLAGVVADQYGLPTAVTAIAVFPLLASLICFV
                     LLIQRRS"
     gene            3522..>3940
                     /locus_tag="VLM90_09030"
     CDS             3522..>3940
                     /locus_tag="VLM90_09030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13150.1"
                     /translation="MKIARPYWLLLALVGLSLHASESKAQLSKTTTSYVSDSAGVLPL
                     WLAKEAGIFARNGLYVQAVRVHAAVGVMALMSGELQFVLVSGPVAVESALRGSNMVYV
                     AGGMSTLDFVLVTRPEIKTAEQLKGCTVGLSAIRGANP"
BASE COUNT          706 a         1085 c         1202 g          947 t
ORIGIN      
        1 gcgcggtttc tcgcggcgca cgccgggcat gtcttcgata attcccggcg gttgatagtg
       61 ctggatgccg ccaaactgag tgtggatggc gatggggtcg catttgttta agacttccag
      121 atcgttttca aactcgcgga tcgagttgta gtgcatgccg gcttcgagcc aatcgacctt
      181 gactaccggg cgcgacgaat tggtagcgct gcaaatgacg tcgcaaccgc gtaccgactc
      241 ttccgggctg gcgaccggtt cgccggcgac accggtttcc ttttccatct cggcgacgaa
      301 ggctttgcga tgttccgggt tggggctgaa gactttgact cttttgagcg gcatcaccgc
      361 ggtcatgtag cggtagtgcg ctttggcctg accgccggag ccgatgagac ccaaggtctg
      421 cgaatttttt ctggccatga ctttcatgcc gagggcgctg gtgacgccga cgcgggtttg
      481 ctggatcaaa ccgtcgggca tgatggctaa cagttcgccg gtcgccgcgc tgtagagttg
      541 caccaggccg acgaacagtc ccttgcccgc cagcgggatt ttttccaagc gcaccgtgcc
      601 atggactact tgttcctgga cgacatccga ggttatccgc aaggccaaga ccccgtactt
      661 gccaacgccg ccgtcgacgg acttaaaact gtaggtcgag ttgggcagcg catggggcag
      721 ataggaatgg caagtgggcc ggttgacggc gcggcttgcg gcctgttcgc ggtaagactc
      781 ctccatgatg gttaggcaat ctttcacatt gagcgccttg tcaacgtcgt cgttgctgag
      841 aataagcgtc attccaaaac ctccaagtga tcggtcgaat aactttttaa catagggtgt
      901 aggcgaggga tagctgattt gaaaattctt gggcctgccc gagaccggtc aacccgatgg
      961 ttttccccac agttggttga catcttcgag cggcgttgca cagagttcgt cggcacttcc
     1021 atggcatttg ccgccacttg caggactgct tggaagtcta tgttgatttg gccgaccgtt
     1081 ggctgcgccg aatggcgccg tccggctcgg cgcgggcatg gtgtgagaat tgctaaaatt
     1141 ctttccgttc gtccgttaga gtctgcaatc tacgccaatt gagagggcaa tccatgcttc
     1201 aaagccagag ccgcaaatcg tcccaagact cgcctcctcg tgagctttcg ttggttatcg
     1261 gtcccactga agtggccgac gtaatgatcg ccaaggtagc cactttgagc acgcatcacg
     1321 gttttgacga tgcggtgcgg ctgatgaagg atcgccactt tcgccactgt atcgtggtcg
     1381 acatgcaggg taagctttgt ggtgtcatct ccgatcgaga cattttgcgg tctatggcgc
     1441 gcgatgggca ttcacggtca aagtccctcg atcaaatcat gacgcgcaac ccggtcacgg
     1501 tgaagcgcca tacttcgatc ctctatgccg tttcaaaaat tatttcgaag aaaatcaact
     1561 gcctgccggt ggtggaagac gacggcacgg tctgcggcat cgtgacgtcg accgatttac
     1621 tcaagtccta ccagcaagtg ctcgagatgg tgcacaaaca ggccggctga tcgggtttct
     1681 tcacctctgc attgatcgac ttctaattgg cgctagactt agccatggcg cggaaatttt
     1741 cggtcacggt caagccgaac gctcgccata tcggcgtcga gaaaatctca gaatcggaat
     1801 ttcgcgttgc ggtccgtgct ccggcaaggg acggcgcagc caatcgcgcg gtgatcgaag
     1861 ctttggcgga atatttcgcg attgccaaat cctccctaag aatcatccgc ggccactcgt
     1921 cgcgaaaaaa gcacatagag atcgattgat ccggcttcgt agcgctgtcc tcgtttcaat
     1981 tggtgagctg aggcttgcga ctaaggcaaa atcggcatat gaaatcggag aaacctccga
     2041 ggaggaacgt ttgtcaaaag ccgaaaatat tgaagctgta agcttgccgc tcgccaactg
     2101 gggccggctt gccgctaact gcaccgcgca tatgaccgag catctgttca atgccgtggt
     2161 cagcgtgatc ttaccgctga tcaccgcgtc gttgggactg agcctgtcgc aagccggcgc
     2221 cctcgcatcg gtccgcacgc taatggctgg cgtggctagt ttcccttccg gttttctcgc
     2281 cgacctggcg agccggcgca atctgttgct cggtggctgt atcgccttga tcggcgtggc
     2341 atcgttaggc ttgagcgcgt cgtatagttt ccaactgttg atggttttca tggggctcgg
     2401 cggatttggc ggcggttggt ttcatcccca gtcgttggcg attttgtccg agaagtatcg
     2461 cacccagaaa gctttcgctc ttggcgtgca tgatagcagc gccaatctcg gggaggtcat
     2521 cgggccgttg gcgatcggct tgatgctcaa ttttttcgat tggcgcaccg cgctgctgtt
     2581 ctgggcgatt cccgggttgc tggtcggcgc gatctacgcg ctggtgggcg ccgaaggcat
     2641 gctggctgtg ccgcgcggcc gcgactaccg caaggcgatc tggaatgatg tgctcaagaa
     2701 caaaaccgtt tgcgggctcg tcgccgtgtc gaccttgcgt gccatggggc agacggcgtt
     2761 ggcgtctttt ctgccgctct atctggcgtt gcatttacaa ttgccggccg ccgtcaccgg
     2821 cgcttacatg tcgatcttgt ttctctgcgc cggcgtggcg ccggctctcg tcggttgggt
     2881 ttccgaccgc atcggccatc gttatttgat cgtgctgttt tcgctcttga gtgtggctat
     2941 ggtggtggcg atcccgcact tgggttcggg agcggtccta gttgccggtt tggggacttt
     3001 gggcgcgctg ctctgggcgt tgcggccggt gatcgtgtcg gcggcgatgt cagaggcgcc
     3061 gcaacagctg tcgggcagca tcgtggcgct catctatggc gccaatatgg gtctgtcttt
     3121 tttagcgccg ctcttggcgg gcgtcgtcgc cgatcaatac ggcctgccca ccgcggtgac
     3181 cgccatcgcg gtatttccgc tgctcgcgtc cctgatttgc tttgttctgc tgattcaacg
     3241 gcgcagttga agcctgaatt aaccggttgg aagttagccg cgctgcaagg ggcaagccct
     3301 ccgcaatgaa gccaatggac cgctacctct aatcactccc tggcctgggg taggtccggg
     3361 tagttccgct ggtaacagat agctggcgcc gcggatgaaa taagacttcg cgactgcaca
     3421 gttggattgc ttcaatgctc cagtgtgaga ttaagtttcg cgccattgac ggcgcggcgc
     3481 cgcgtcggtt aggttccggc catgggtttt gaggggtgcc gatgaaaatt gctagaccat
     3541 attggctgct gctggcgctg gttgggctga gtttgcatgc aagtgagagc aaagcgcagc
     3601 ttagcaaaac cacgacctcc tacgtttccg attcggccgg tgtcttgccg ctctggctcg
     3661 ccaaggaggc cggtatcttc gcgcgcaacg gcttgtatgt gcaggcggtg cgcgtgcacg
     3721 ccgccgtcgg agtcatggcg ctgatgtccg gcgaactgca attcgtgctg gtgtcgggac
     3781 cggtggcggt tgaaagcgca ctgcgcggct ccaatatggt ctatgtcgcc ggcggcatgt
     3841 cgacgctaga cttcgtcctg gttacccggc cggaaatcaa aaccgccgaa caactcaaag
     3901 gctgcaccgt cggcctgtcg gcgatccgcg gcgccaatcc
//
LOCUS       DATIRS010000717         3244 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1135472, whole genome shotgun sequence.
ACCESSION   DATIRS010000717 DATIRS010000000
VERSION     DATIRS010000717.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3244)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3244)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3244
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1135472"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(101..1138)
                     /locus_tag="VLM90_09035"
     CDS             complement(101..1138)
                     /locus_tag="VLM90_09035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13151.1"
                     /translation="MIKNFALAILTLSLLSSAHAQTPFYQGKTIIVIVSTSPGGTGDL
                     RVKALVPFLRKHIPGNPSLVLEYMDGGGGRKGANHLFRSARADGLVIGAMSSSVISLN
                     VMGESGVLYDLDKFIYLGAPESVGHQVLYTRKELGTNSLEKLKAKSGLRIGAQSVGHV
                     SYVAGRLFAYLLDLKDSKFIAGFTAPELDAALLRGELDSRANAAVSVMRRNPDWLDKG
                     IMDFHAIMEIPTGVKHARMSHLPEIERFVKNDREKKLLGVWKLFRQVGSPYMAPPGTP
                     KDRVDILQEAMRRTLNDSEFHREFLKLVGDEVEPLLAGELTKLVKNAPRDAETIDLLK
                     VISGAGPLPPR"
     gene            complement(1199..2110)
                     /locus_tag="VLM90_09040"
     CDS             complement(1199..2110)
                     /locus_tag="VLM90_09040"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSQ13152.1"
                     /translation="MLEESVTARRSLLFNNPGVPMGGTTHTLLMGIQMIKAGEIAWAH
                     RHTLAAVRFVAKGDGKVFTVVNGEKCPMQPNDLILTPQWTWHDHQNPTKETAMWVDVL
                     DVPFMLGLNQPFYEPYPGDKVQAVRDRPSEHLQQRAGWVRPVWENSQKENLPLRYAWN
                     DIEPQLRALADQPGSPYDGVALEYVNPMTGGPTLPTLSCWIQLLRPGEHTKKHRHTSS
                     AVYFVAGGEGTTIVGDKALEWTKNDCFAVPNWAWHEHVNRSKSEEALLFSVNDSPIVS
                     AFGHYREEPEVSLRSMSIPAVPVPKSK"
     gene            complement(2120..2296)
                     /locus_tag="VLM90_09045"
     CDS             complement(2120..2296)
                     /locus_tag="VLM90_09045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13153.1"
                     /translation="MAKPEIKKSLQQFDDELKQLYITGQWQYEGLLAACIGGPKPRGE
                     AYLWPWKMVGEKLA"
     gene            complement(2460..3164)
                     /locus_tag="VLM90_09050"
     CDS             complement(2460..3164)
                     /locus_tag="VLM90_09050"
                     /inference="COORDINATES: protein motif:HMM:NF025871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing redox enzyme family protein"
                     /protein_id="HSQ13154.1"
                     /translation="MAKQSAFAAAMDKIVADCNDRLEWVKSSKDNLTKDAARVLIEQW
                     SSFTRHSRQCWAYVVGNCPHVEVRKFVVTENLYEEEAQEGHSHFEILARMGMALGLTR
                     DQIVNATPLPTTVVSMRCWEALTKNRTWYEGLAAKSVLERTNNPNCGNFSHHQSEYWM
                     RQLGLSKEDTEFWWMHDSVDQIHGDGSLNLLEKYLTTDAEQQAALRAAEESMMAWQIY
                     FDGFYFEGIRRSATNR"
BASE COUNT          640 a          960 c          941 g          703 t
ORIGIN      
        1 ggggggggat tgaaccgagc gccgttcgga gagccgcacg gccctgagga caatcgaagc
       61 gcagcggttg aacattttgc ctgccttgaa ctccccagtt ttaccgcggc ggcagcgggc
      121 cggcgccgga aattaccttg agcaaatcga tggtttcggc gtcacgcggc gcgtttttga
      181 cgagcttcgt cagttcgccg gcgagcagcg gctcgacttc gtcgccgacg agcttcaaaa
      241 actcgcggtg aaattcactg tcgttgagtg tccggcgcat cgcctcctgg agaatatcga
      301 cgcgatcttt gggcgtgcct ggcggcgcca tatagggcga accgacctgg cggaaaagtt
      361 tccacacgcc gagcagcttt ttctcccggt cgtttttcac gaagcgttcg atctcaggga
      421 gatggctcat acgcgcatgt ttgacgcccg tggggatctc catgatggcg tgaaagtcca
      481 tgatgccttt gtcgagccag tccgggttgc gccgcatgac cgatacggcg gcgttggcgc
      541 gcgagtcgag ctcgccgcgc aacagcgcag catcgagttc cggagcggtg aagccggcga
      601 tgaatttgct gtctttcaag tccaaaaggt aggcaaatag tcgtccggca acataggaga
      661 catggcccac cgattgggca ccgatacgca agccagattt tgctttgagc ttttccagac
      721 tgttcgtgcc cagttctttg cgcgtgtaga gaacctgatg gccgacgctt tccggcgcgc
      781 ccaggtaaat gaatttatcg agatcgtaga gcacgccgct ctcgcccata acgttaagcg
      841 agatgacgct gctgctcatg gcgccgatga cgagaccgtc ggcgcgcgcg ctgcgaaaca
      901 agtggttggc tcctttgcgt ccgccgccgc cgtccatgta ttcgagcacc aggctgggat
      961 ttcccggaat atgtttgcgc aggaatggca ccagcgcctt tactcgaagg tcgccggtgc
     1021 cgcccggcga ggtgctgacg atgacgatga tggttttgcc ttggtaaaag ggggtctggg
     1081 cgtgggcaga acttagcaac gataaggtga gaattgccag tgcaaagttc ttgatcatgc
     1141 catctcctta cagggtcaaa tcggagtgat cgaacggctt gaacattttg aacggcggtt
     1201 atttggattt tggaaccggc accgcgggga tcgacatcga cctcaatgaa acctccggtt
     1261 cctcgcggta gtggccgaag gcgctgacga tcggcgaatc gttgaccgaa aaaagcaacg
     1321 cttcctcgct cttcgagcgg ttgacatgct catgccacgc ccagttgggc acagcgaaac
     1381 aatcgttctt ggtccattcg agcgctttgt caccgacgat cgtcgtgccc tcgccgccgg
     1441 cgacgaagta caccgcgctc gaagtgtggc gatgcttctt ggtgtgttcg ccgggccgca
     1501 gcagctgtat ccagcagctc agcgtcggca aggttggccc gccggtcatc ggattgacat
     1561 attccagggc aacaccatcg tagggactgc caggttgatc ggccagggcg cgcagctgcg
     1621 gttcaatatc gttccaggca tagcgcagcg gcaagttttc cttttgcgaa ttttcccaaa
     1681 ccggccgcac ccaacccgcg cgctgctgca aatgctcgct cggcctgtcg cgcaccgctt
     1741 gcaccttgtc gcccggatag ggctcgtaaa aaggctggtt gaggccgagc atgaacggca
     1801 cgtcgaggac atcgacccac atcgccgttt ccttggtcgg attctgatga tcgtgccagg
     1861 tccattgcgg cgtcagaatc aaatcgttcg gttgcatcgg gcacttctcg ccattgacca
     1921 cggtgaacac cttgccgtcg cctttggcga cgaaacgcac cgccgccaaa gtgtggcgat
     1981 gcgcccaggc gatctcgccg gccttgatca tctgaatgcc catgagcagc gtatgcgtcg
     2041 tgccgcccat cggcacgccg ggattgttga acaacaaact gcgccgcgcc gtgacgctct
     2101 cttcgagcac gtcgcaggcc taggcaagct tttcaccgac catcttccag ggccaaagat
     2161 aagcctcgcc gcgcggcttc ggcccgccga tacaggcggc cagcaaccct tcgtactgcc
     2221 actggccggt aatgtagagc tgtttcagct cgtcgtcgaa ttgttgcagc gattttttaa
     2281 tttccggctt tgccataact cctcccgggg ttcagaccgt tccagccgtt caaaacgttc
     2341 caaccgtttc agccccctcc ttcatcctcc cccgcgacgc gggggaggac cagaggtggg
     2401 ggttcgaacg gagcgcagcg gttgaacgaa ttgaacgatt tgaacggttc tgcgacgaat
     2461 cagcggttcg tcgcagaacg ccttatccct tcaaagtaga agccatcaaa ataaatctgc
     2521 cacgccatca tcgattcctc ggccgcgcgc agcgccgcct gctgctcggc gtcggtggtg
     2581 agatatttct cgagcaaatt gagcgaaccg tcgccatgga tctgatcgac ggagtcatgc
     2641 atccaccaga actctgtgtc ctctttcgac aaacccaact ggcgcatcca atactcggac
     2701 tgatgatggg aaaagttgcc gcagttggga ttgttggtgc gctcgagcac cgacttggcg
     2761 gcgagtccct cgtaccaggt gcggttcttg gtcagcgctt cccagcaacg catcgacacc
     2821 acggttgtcg gcagcggtgt cgcgttgacg atctggtctc gggtcaagcc caacgccatg
     2881 cccatacgcg cgaggatttc aaagtgggaa tggccttcct gcgcttcttc ttcgtacagg
     2941 ttctcggtga cgacgaactt gcgcacttcg acatggggac agttgccgac tacgtaagcc
     3001 caacactgcc ggctatgccg ggtgaaactc gaccactgtt cgatcagcac ccgcgccgcg
     3061 tccttggtca aattgtcctt cgacgacttc acccactcga gccggtcgtt acaatcggcg
     3121 acgatcttat ccatcgccgc ggcaaatgca gactgcttgg ccaccattca atcccccata
     3181 aattggagtg atggagtgtt ggagtactgg agtgttgggt ccggaaaccc attactccac
     3241 cact
//
LOCUS       DATIRS010000718         1743 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1429998, whole genome shotgun sequence.
ACCESSION   DATIRS010000718 DATIRS010000000
VERSION     DATIRS010000718.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1743
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1429998"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            250..1698
                     /locus_tag="VLM90_09055"
     CDS             250..1698
                     /locus_tag="VLM90_09055"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ13155.1"
                     /translation="MPFNDVREFIEAARQLGQVKEIHGAHWNLEIGALTEMLAFKEPA
                     PLVLFDQIPDHAPNFRVASNLINTPTRSGLTVGMPADAAPIELVARWKELLKGVKPIP
                     PRVVKDGPILENVKTGPDIDMTIFPTPHWHELDGGRYIGTADCVITGEPEEGGWVNVG
                     IYRVQVHDKNTLGLYVSPGHHARIMREKYWEKGKSCPVVVTFGQDPLLFLVAGQSIPY
                     GMSELDYCGGLRGAPVDVVRGDVTGLPIPATAEIAIEGEVPPPREQVHVEGPFGEWPG
                     YYAHGAANEPVIRVKKLYYRNNPILCGAPPIKPPFITFGVPIGAAAIWNYLEKADVPD
                     IKGVWCYVGGSAAAGGAPFVVVSLKQRYHGHSQQAGIAALGSRAGNYHGRFIIVVDED
                     IEPSDMKEVIWAVSTRCDPKTAISIIDGCWSTPLDPAMHPDQRDAGNFVNSRAILNAC
                     RPYAWRDRFPPVNALSPELRQKMAEKWKKDLA"
BASE COUNT          357 a          557 c          501 g          328 t
ORIGIN      
        1 ggaccagaat attgttgttt gaccaacgcc gactacgtgg cgctcttcca cgacggcatt
       61 tacgagcacg ccaaagcgct gggccatttt taacgtgccg ttcgcgagac cctaccagca
      121 acaaacaact atgcttgcgt cgttggtgca ccgccgatcc ttcggtaggg gcgggtttaa
      181 aacccgcccc tacaatgcga ttggtcaaca agacattcag cgcatgcagc gctcttagga
      241 gactcaccta tgccattcaa cgatgtgcgg gaatttatcg aagcggcgcg tcagctcgga
      301 caggtcaagg agattcacgg cgcgcattgg aatctggaga tcggcgccct caccgaaatg
      361 ctcgctttca aggaacccgc gccgctcgtg ctcttcgatc agatacccga tcacgcaccg
      421 aatttccgcg tcgcttcgaa tcttatcaac acgccgacgc gctcaggtct gaccgtcggc
      481 atgccggccg acgccgcgcc catcgaattg gtcgcgcgct ggaaagaatt gttgaaaggc
      541 gtgaaaccta tcccgccgcg cgtggtcaag gacggtccga ttctcgagaa cgtcaaaacc
      601 ggtcccgaca tcgacatgac gattttcccg acgccgcact ggcacgagct tgacggcggc
      661 cgctacatcg gcaccgccga ctgcgtgatc accggcgagc cggaagaagg cggttgggtc
      721 aacgtcggta tctaccgggt tcaggtgcac gataagaaca ctctcggcct ttacgtttca
      781 cccggccacc acgcgcgcat tatgcgcgag aaatactggg agaagggtaa gtcctgccca
      841 gtggtggtca ccttcggtca ggatcccctg ctctttctcg tcgccggaca atccataccc
      901 tacggcatgt cggaactgga ttattgcggt ggcttgcgcg gcgcgccggt ggacgtcgtc
      961 cgcggcgacg tgaccggcct gccgattccg gccacggccg agatcgccat cgaaggcgaa
     1021 gtgccgccgc ccagggagca ggttcacgtg gaaggcccct tcggcgaatg gccgggttac
     1081 tacgcccacg gcgctgccaa cgagccggtc atccgggtga agaaacttta ctatcgaaat
     1141 aatccgatcc tatgcggcgc gccgccgatc aagccgccgt ttatcacttt cggcgtgccc
     1201 atcggcgctg cggcaatctg gaattacttg gagaaagccg acgtgccgga tatcaaaggg
     1261 gtgtggtgct acgtcggcgg ttcggccgcc gccggcggcg cgcccttcgt cgtcgtttct
     1321 ctcaagcagc gctaccacgg ccactctcag caagccggca tcgccgcgct cggttcccgc
     1381 gccggaaact accacggccg attcatcatc gtcgtcgatg aagatatcga gccatccgac
     1441 atgaaagaag tgatctgggc ggtgtcgacc cgctgcgatc cgaagacggc gatcagcatc
     1501 atcgacggct gctggagcac gcccctcgat ccggccatgc atcccgatca gcgggacgcc
     1561 ggcaacttcg tcaacagccg cgccatcctc aacgcctgcc gtccctacgc gtggcgcgat
     1621 cggttcccgc cggtcaacgc gttgagcccc gagctgcgcc aaaaaatggc ggagaagtgg
     1681 aagaaagatc tcgcgtaatt ctgccgcgcc aaataatgaa acttaacttc ccttgagcgc
     1741 act
//
LOCUS       DATIRS010000719         6310 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_249763, whole genome shotgun sequence.
ACCESSION   DATIRS010000719 DATIRS010000000
VERSION     DATIRS010000719.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 6310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6310
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_249763"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..564
                     /locus_tag="VLM90_09060"
     CDS             <1..564
                     /locus_tag="VLM90_09060"
                     /inference="COORDINATES: protein motif:HMM:NF014471.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="HSQ13156.1"
                     /translation="GLPLLRQLQPSHTLEVFDSFFRVGSLVFGGGHVVLPLLQTEVVG
                     PNWITNEQFVAGYGATQAVPGPLFTFSAYLGAVMGPEPNGWTGAFLALVAIFLPSFLL
                     VVGALPFWDSLRSAPVFQSALKGINAAVVGLLLTALYKPIWTSAIYSPADFGLGLVAF
                     ALLMFWKCPPWLVVVLTAAGGEVIARI"
     gene            578..706
                     /locus_tag="VLM90_09065"
     CDS             578..706
                     /locus_tag="VLM90_09065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13157.1"
                     /translation="MSVTPVRQRGYANPQLLAETEWLAKHMNDPAVSIVDAPPPEV"
     gene            complement(731..1942)
                     /locus_tag="VLM90_09070"
     CDS             complement(731..1942)
                     /locus_tag="VLM90_09070"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ13158.1"
                     /translation="MGFPLSRDGWLLFASCGVRSLAYGFLSVILGLYLDAIGLSATAI
                     GWIFTAALAGGAVMTIVITAVADSFGRKTLLIVGAVLMALAGLAFAVSDNPMVLTLAA
                     IFGTISPSGKEVGPFLSLEQAILPQTTSDRHRTAVFSAYNLVGSFAGALGALTVSLPS
                     LFSLTTAIAGYRFLIWGYVASALLLAGLFTLLSPEVEAPKRTRLSARQLVLQKSRGIV
                     IKLAGLFALDAFAGAFIVQSIVAYWFYLRYQTDLNTLGGIFFGTNILAALSFLAAPAI
                     ARRFGLLNTMVFTHLPSNILVLLVPLMPNVDWAVAVLLLRHLLSQMDVPTRQSYTMAV
                     VDADERAAAAGVLAVARNAGAAVAPLFTGAMLAVPTLGLPFLLAGGIKIVYDLWIFAV
                     FRHVRPPEESQ"
     gene            complement(1963..2706)
                     /locus_tag="VLM90_09075"
     CDS             complement(1963..2706)
                     /locus_tag="VLM90_09075"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSQ13159.1"
                     /translation="MLLADKIALVTGSTHNIGLAIARAFAREGAKVVVHSRHEADAKK
                     VAEEIGGDFIAADVSDAEQVKAMFDHIKTKHGGLDILVNNVAQSSKGGILDITLEEWN
                     RILALNLTGYFLCIQHAGKMMKAQGNGSIINISAASGERSSPGGAAYSISKGAVNSLT
                     RPAAADLAPTIRVNGLISGLVGTPIGAKDMGSRKPEYDIIPLRRIGQPEDVAEAALFL
                     ASDKASYITNSILPVDGGRLNSMGSGSSR"
     gene            2855..3139
                     /locus_tag="VLM90_09080"
     CDS             2855..3139
                     /locus_tag="VLM90_09080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13160.1"
                     /translation="MTNQGFVDTIGLSAAMAILLAFTGCSSRSTKLIHPQSGATAECS
                     ANGFAVGVSIADGMVGGCSRAYEERGYVPLERLQPDERASLERRGLLGKN"
     gene            complement(3201..3758)
                     /locus_tag="VLM90_09085"
     CDS             complement(3201..3758)
                     /locus_tag="VLM90_09085"
                     /inference="COORDINATES: protein motif:HMM:NF018201.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13161.1"
                     /translation="MAPLKLNAVIERGVNDDDILPLVDFSRANGFAMRFIEYMDVGNS
                     NNWTSAKLVAKKQIIETIHARYPLREIGRDQGSAPSVDYEFLDGQGDIGVIASVTEPF
                     CSSCTRSRITADGKFVTCLFSDVGHDLKAQLRSGASDDEVGQFIAKIWSGRTDRYSAD
                     RLTALNTSNYDPKNHKKIEMISLGG"
     gene            complement(3786..4211)
                     /locus_tag="VLM90_09090"
     CDS             complement(3786..4211)
                     /locus_tag="VLM90_09090"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSQ13162.1"
                     /translation="MVIDSFNRPLKDLRISVTDRCNFRCTYCMPLDEYEWIDKKEILT
                     FEEIARIAKLFIERGVEKIRLTGGEPLVRQDLHRLIEKLAPLDGLMDLCLTTNGALLA
                     NQIDALAKAGLKRVNVSIDTLDADKFKRMTKRGDLDKVL"
     gene            4317..5855
                     /locus_tag="VLM90_09095"
     CDS             4317..5855
                     /locus_tag="VLM90_09095"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HSQ13163.1"
                     /translation="MSLRQQQIAVFCATVVVIFGLLGAGIWLIAQRLTAEATLQTALL
                     MARQVEIALADSLRERPVIVQRQQQAQKAPASFWGFLGNVFDGRRSAPSSTTTTTRYS
                     APRHDDVRGLMRAFVDRSASIEAMWVVNGDGQLLYTSVAGDGEKSPSTTLVMNKLRNG
                     ETLTSTKRQGNNDYYDVWVPLQMPQGVRSPGGLRLWLNPADWTGLLSGLWHQLTLLFV
                     LGGGVALVAAFLTTTLYTRRFRLIADTLRQAEAGTYAARPQYGSQDEVGISLDLIDRL
                     VMKQRKNVGAPAPVQRLAIAARTLAHEVKTPLNALAIHLEVLRNKLTSEEDNDQQSQR
                     SITALDSSIRQVDRLVRDFTDYSAPVTMEHKPIDVAAVLHTSLEAIGTACLAKKIKLM
                     KELAPGPWQVSGDATRLRQTFDNLLRNALEAQPDGGEVRVSAKAQSAQLIIDISDAGP
                     GVPPDQRGEIFEFGKTTKATGSGIGLPLSQLIVESHGGSLVYHERNGSGATFRVQLPM
                     EAVV"
     gene            5856..>6310
                     /locus_tag="VLM90_09100"
     CDS             5856..>6310
                     /locus_tag="VLM90_09100"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSQ13164.1"
                     /translation="MARPRSTVLVVDDDPATRQGLTVLLDSWGYQASEAEDGKAALAA
                     CDRELPQAIVTDLMMPGMTGLEFVAALGERVQQAAVVFVTGQAAIDTAVQAIKLGAYD
                     YLSKPLEPQRLREVLEKALKQITLSRETGALRQRLESPLGSYGALIGKSA"
BASE COUNT         1332 a         1867 c         1835 g         1276 t
ORIGIN      
        1 gggttaccgc tgctccgcca gctgcagccg agccatacgt tagaggtttt cgatagcttt
       61 ttccgtgtcg gctcgttggt attcggtggc ggtcatgtgg ttctgccgct gcttcaaacc
      121 gaagtggtcg gaccgaattg gattaccaac gaacaattcg tcgctggcta tggcgctact
      181 caggccgtgc cgggaccgtt atttacattc tccgcttacc tcggcgccgt gatgggtcct
      241 gaacccaatg gttggaccgg agccttcctc gccctcgtgg cgatttttct tccatccttt
      301 ttattggtcg tcggcgcgct tcctttttgg gactctctgc gctcggcacc ggtcttccag
      361 tcggctctaa aggggatcaa cgcggctgtc gtcggattgc tgctgacagc actgtacaaa
      421 cctatctgga caagcgcgat ctactcaccc gcggacttcg gccttggact cgttgctttc
      481 gcactcttga tgttttggaa atgtcccccc tggctggtgg ttgtcctgac cgcggccgga
      541 ggggaagtca tcgcgcgcat ataagaggag gaacgttatg tcggtcactc cggtacgtca
      601 acgaggctac gcaaatccgc aactgcttgc tgaaacggaa tggctcgcga aacatatgaa
      661 cgatcccgcc gtcagcatcg tcgatgcccc gccaccagag gtttagcaat tcgatcacgc
      721 aatcccgcaa ctactgactc tcctctggcg gcctcacatg gcggaacacg gcaaaaatcc
      781 acagatcgta gacaatcttg attccgccgg ccagcaagaa cggtaatcct aatgttggaa
      841 ccgcgagcat cgcgccggta aacagcggcg caaccgcggc gccggcattg cgcgcaaccg
      901 caagcacacc ggccgcggct gcgcgctcgt cggcgtcgac gacggccatt gtgtaagact
      961 ggcgcgttgg cacgtccatt tgcgacagca ggtggcgtag cagcaatacc gctaccgccc
     1021 agtcgacatt cggcatcagc ggaaccaaca acaccagaat attcgacggc aggtgcgtaa
     1081 acaccatcgt gttgagtaag ccaaaccggc gcgcgatcgc cggcgcggcg aggaaagaaa
     1141 gagcggcgag aatattggtg ccaaagaaaa tcccgcccag ggtgttcaga tcggtttggt
     1201 aacgcagata aaaccagtaa gcgacgatgc tctggacgat gaatgctccc gcgaaagcgt
     1261 cgagagcgaa aagcccggcg agcttgatga cgatgccgcg tgatttttgc agaacgagct
     1321 ggcgtgctga cagtcgggtt ctctttggcg cttcgacttc aggtgagagc agggtgaaca
     1381 gcccggcaag taaaagtgcc gaagcgacat aaccccagat caagaatcgg taaccggcaa
     1441 tcgcggtcgt caatgagaag agcgacggca ggctgaccgt caacgcgccc agcgcgccgg
     1501 cgaaggagcc gaccagattg tacgccgaga aaaccgcggt gcggtgccga tcgctggtgg
     1561 tctgcggcaa gatcgcttgt tcgagtgaga gaaacggccc gacttctttt cccgacgggc
     1621 tgatggtgcc gaagattgcc gcgagcgtca gcaccatcgg attgtcgctt acggcaaacg
     1681 ccaagccggc aagcgccatc agcactgcgc cgacgatcag caaagtcttt cgcccaaagc
     1741 tgtcagccac cgcagtgatg acgatcgtca tcaccgcgcc gccggcaagg gccgcagtga
     1801 atatccagcc gatcgccgtc gcgcttaggc caatggcgtc gagataaagt ccaaggatga
     1861 ccgagagaaa accatacgcc aaagaacgca cgccgcagct ggcgaacaat aaccaaccgt
     1921 cccgggagag gggaaaaccc atcgaactcg cttgggatca gttcaccgcg aactgccgct
     1981 gcccatggag tttagccggc cgccgtccac cggcaagatc gaattggtaa tgtagctcgc
     2041 tttatccgag gcaagaaaca acgcggcctc ggcgacatct tccggctgac cgatgcggcg
     2101 caggggaatg atgtcgtatt ccggtttacg gctgcccatg tccttggcac cgatcggcgt
     2161 accgaccagg ccggagatca aaccattaac ccggatcgtt ggcgccaggt cggcggcggc
     2221 tggtcgggtt agggaattca ccgcgccctt ggaaatcgag taggccgcgc caccggggct
     2281 cgatcgctcg ccggaggcgg cggaaatatt aatgatgcta ccgttgccct gcgctttcat
     2341 cattttgccg gcatgttgaa tgcagagaaa gtagccggtc aggttgagcg ccagtatgcg
     2401 gttccattct tccaaagtaa tatcgaggat accgcccttg ctcgattggg cgacgttgtt
     2461 gacgagaata tccaggccgc catgtttggt cttgatgtga tcgaacatcg ccttgacttg
     2521 ttcagcatca gacacatcgg cggcgataaa atcgccgccg atctcctcgg caactttctt
     2581 ggcgtccgct tcatggcgcg aatgcaccac gactttagcg ccctcgcggg cgaacgcccg
     2641 cgcgatagct aagccaatat tatgagtgga gccggtaacc aaagcgattt tgtctgcgag
     2701 caacatgcaa tactccttgg gctgttgttg aaagtctgtg gctatctcaa gcccgagtgg
     2761 cgggcaataa tttttgccga aacgctaata gtggactaac cgttgcgtct aaccaactga
     2821 accctccatg ctgtgacaaa ctggagtcta caatatgacc aaccaaggtt tcgtcgacac
     2881 catcggtctc agtgcggcga tggcaatcct tcttgccttc accggctgct caagccgatc
     2941 gactaagctg attcacccgc aaagcggcgc caccgccgag tgcagtgcca acggtttcgc
     3001 tgtcggcgtc agcatcgccg acggcatggt cggcggctgc agccgggcct acgaagagcg
     3061 cggctacgtg ccgttggaac gtctccaacc cgatgagcgc gccagtctgg agcggcgcgg
     3121 cctgctgggt aaaaattagt gtgggcaaat ccgtagccgc aacggtcgac acagcctgta
     3181 ggcaagccgg cgaagctgcg tcatccgcct agcgagatca tttcgatttt cttatggttt
     3241 ttgggatcgt agttcgacgt attgagcgct gtcaggcgat cggctgaata acggtcggtg
     3301 cgcccagacc agatcttagc gatgaactgg ccaacctcgt cgtcgctggc accgctgcgt
     3361 agctgcgcct tcaagtcatg accgacatcg gaaaaaaggc aggtgacgaa tttcccgtcg
     3421 gcggtaatcc gcgaccgcgt gcagcttgaa caaaatggtt cggtcaccga agcgatcacg
     3481 ccgatatcgc cctggccgtc gaggaattcg taatccaccg acggcgcgct gccctggtcg
     3541 cggccgattt cccgcagcgg atagcgggcg tggatcgttt cgataatctg ttttttcgcc
     3601 accaattttg ccgaagtcca gttgttcgag ttgccgacat ccatgtactc gatgaaacgc
     3661 atggcaaagc cgttggcgcg ggagaaatcc acgagcggca agatatcgtc gtcgttgacg
     3721 ccgcgctcga tcacggcgtt gagtttgagc ggcgccatac cagccgcttt ggcggcaaag
     3781 attccttaga gcactttgtc gaggtcgccg cgcttggtca tgcgtttgaa cttatcggca
     3841 tccaaggtat cgatgctgac attcacccgt ttcagtccgg ctttggcgag ggcgtcgatt
     3901 tgattggcca acagcgcgcc attggtggtc agacaaaggt ccatgaggcc gtccagcggc
     3961 gcgagttttt cgatcaatcg atgcaggtct tggcgcacca gcggctcgcc gccggtgagg
     4021 cgaatctttt cgacgccgcg ctcaataaaa agcttggcga tgcgagcgat ctcttcgaag
     4081 gtcaaaatct ctttcttatc gatccactcg tactcatcca acggcatgca gtaggtgcag
     4141 cggaaattac accggtcggt gaccgaaatg cgcagatcct tgagcggccg attgaagctg
     4201 tcgatgacca tcgcagtaac tatgcaacaa aggggtaggg ggttcaagct cgcgcttttt
     4261 tcgctggaaa atcattgctt tgccggattt ggccgatctg ttattctatt ttggcaatga
     4321 gcctgcgcca gcaacaaatc gccgtctttt gcgctacggt agtagtcatt ttcggcctac
     4381 tcggtgccgg tatctggttg atcgcccagc gcttaaccgc cgaagcgacc ttgcagaccg
     4441 cgttgttaat ggcgcgtcaa gtcgagatcg ccctggctga tagcttgcgc gagcgcccgg
     4501 tgatcgtcca gcgccagcag caggcacaaa aagcgccggc gtcattctgg ggatttctcg
     4561 gcaatgtttt cgatggccgc cggtcggcac catcctcgac caccacgacc acccgctaca
     4621 gcgcgccgcg ccatgacgat gtccgcggcc tgatgcgcgc cttcgtcgac cggagcgcca
     4681 gtatcgaagc catgtgggtg gtcaacggcg acgggcagtt gttgtacacg tcagtcgctg
     4741 gcgatggcga gaagtcgccg tcgacgactc tggtcatgaa taaattgcgc aacggcgaaa
     4801 ctctcaccag caccaaacgc cagggcaata acgactatta cgatgtctgg gtgcccttgc
     4861 agatgcctca aggcgtgcgc agtccaggcg gattgcggct ctggctcaac ccagccgatt
     4921 ggacggggct gctatccgga ctatggcacc agctgacttt actgttcgtc ctcggcggtg
     4981 gcgtggcgct ggtggcggcg tttctgacca cgacgctcta tacgcgccgt tttcgcctga
     5041 tcgccgacac cctgcgccaa gccgaagccg gcacctacgc ggcccgtccg cagtatggca
     5101 gccaggacga agtcggtatt agcttagact tgatcgatcg cctggtcatg aagcagcgca
     5161 aaaacgtcgg cgcgcccgcg ccggtacagc ggctagcgat cgcggcgcga acgctggccc
     5221 atgaagtcaa aacgccgctc aacgccttgg ccatccatct cgaagtcttg cgcaacaagt
     5281 tgacgtcgga agaggacaac gatcagcaat cccaacgctc gatcaccgcc ttggactcaa
     5341 gcattcgcca ggtcgaccgt ctggtgcgcg actttaccga ctattcagcg ccggtaacca
     5401 tggagcacaa acccatcgac gtcgccgcag ttttacacac cagtctggaa gcgatcggta
     5461 cggcatgcct agcgaaaaag ataaaattaa tgaaagaact cgcccccggc ccctggcagg
     5521 tttccggcga tgccacgcgc ttgcgccaga ccttcgacaa tcttttgcgc aacgccctgg
     5581 aagcccagcc cgacggcggc gaagtcaggg tcagcgccaa agcgcaaagc gctcagctga
     5641 tcatcgatat cagcgacgcc ggccccggcg tgccgcccga ccagcgtggc gaaatcttcg
     5701 agttcggaaa aaccaccaaa gccaccggta gcggcatcgg cttgccgttg agtcagttga
     5761 tcgtcgaatc ccacggcggc tcgctggttt atcatgagcg caacggcagc ggcgcgacct
     5821 ttcgtgtgca attacccatg gaggcagttg tttaaatggc ccgcccacgt tccactgttc
     5881 tcgtcgtcga tgacgatcca gcgacccgcc agggtctaac cgtattactc gacagctggg
     5941 gttatcaggc cagcgaggcc gaagatggca aggctgcgct ggccgcttgc gaccgggaac
     6001 tgccccaagc gatcgtcacc gatttaatga tgccgggcat gaccggtttg gaattcgtcg
     6061 ccgccctggg cgagcgcgtg cagcaagccg cggtggtttt cgtcaccggt caggcggcca
     6121 tcgacaccgc ggtccaagcg atcaagcttg gcgcctatga ttacctgtca aaacctttgg
     6181 agccccagcg cttgcgcgaa gtgctcgaaa aagccctgaa gcaaattacc ctgtcgcgtg
     6241 aaaccggcgc actgcgccag cgcctggagt cgccgctcgg ttcctatggc gccttgatcg
     6301 gcaagtcggc
//
LOCUS       DATIRS010000720         1794 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1626626, whole genome shotgun sequence.
ACCESSION   DATIRS010000720 DATIRS010000000
VERSION     DATIRS010000720.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1794)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1794)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1794
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1626626"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..462
                     /locus_tag="VLM90_09105"
     CDS             <1..462
                     /locus_tag="VLM90_09105"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSQ13165.1"
                     /translation="VRLVLNLVRTIPDLALGLLFVAAVGLGAFAGTIALAIHTATVLG
                     KLLSESVENIDEGVVEAIRATGAGYSQTLSFAVLPQILPDLISFALYRLETNIRAASV
                     LGLIGAGGIGYLMNTSFRTFQYQEAAAIVLVLIALVMLVDYLSSRLRNLVV"
     gene            614..1465
                     /locus_tag="VLM90_09110"
     CDS             614..1465
                     /locus_tag="VLM90_09110"
                     /inference="COORDINATES: protein motif:HMM:NF039482.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+)/NADH kinase"
                     /protein_id="HSQ13166.1"
                     /translation="MIRTVGLVAKYNEPKAARMVRWLIPWLKKRGRKVCVENGLTARG
                     AQSCTKKEMAVEADLIISLGGDGTLLNIAPLVERPEVPILGVNMGGLGFITEVAVDEL
                     KAVLSKTLDGDYQVEKRMTLDVRVISKKRRLRRFRVLNDAVIAKGARSRIIDLETYVG
                     EEYLCTYRADGLIISTPTGSTAYSLAAAGPILEPTLGAIVLSPICPHTLTNRPIVVPS
                     DAPIQVTLRSFGDTVILSPDGQKGVRLNNGDKVEARDFGLPVSLIKLPSRSYYEILRE
                     KLKWGER"
     gene            1478..>1794
                     /locus_tag="VLM90_09115"
     CDS             1478..>1794
                     /locus_tag="VLM90_09115"
                     /inference="COORDINATES: protein motif:HMM:NF024867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSQ13167.1"
                     /translation="MLRELRIKNFAVIDEVALELGPGLNIITGETGAGKSIILNALGL
                     VSGERGSSDIIRHKEDEATVEALFDGVPKLIEAKLADAGFDLDGELVIKRILNRSGKN
                     RIYL"
BASE COUNT          353 a          516 c          536 g          389 t
ORIGIN      
        1 gtgcggctgg tgctgaatct ggtgcggacg attcctgatc tggcgttagg cctgctgttc
       61 gtcgccgccg tcgggctggg cgcgttcgcc ggcacgatcg ctttggcgat tcataccgcc
      121 accgtgttgg gcaagctact atcggagtcg gtagagaaca tcgacgaggg cgtcgtcgag
      181 gcgatccgcg ccaccggtgc cggttactct cagacactct ctttcgccgt cttgccgcag
      241 atcttgcccg atttgatctc gtttgcgctc taccgcctcg aaaccaacat ccgcgccgct
      301 tctgtgctgg ggctcatcgg tgccggcggc atcggctatc tgatgaacac cagctttcga
      361 accttccaat accaagaagc cgcggccatc gtgctggtct tgatcgcttt ggtcatgctg
      421 gtcgactatc taagctcccg tctgcgcaat ctggtcgtgt aacagattgg aatgatggag
      481 tcttggagta ctggagtgct ggtttggcgg actcctacag aattccatca gttcgatggt
      541 ctagtactac agttcccgtc atggactttt tttttcgcca tgtgatactc tccccgatgg
      601 agcaaccttc cgtatgattc gcaccgtcgg actcgtcgca aaatataatg aacccaaggc
      661 cgcgcggatg gtccgctggc tgattccctg gctcaaaaag cgcggcagga aggtgtgcgt
      721 cgaaaatggc ttgacggcgc gcggcgcgca atcttgcacc aagaaggaaa tggcggtcga
      781 ggccgatctg atcatttccc tgggcggcga cggcacgctg ctcaacatcg cgccattggt
      841 cgaacggccc gaggtgccga tccttggcgt caatatgggc ggcttgggat tcatcaccga
      901 ggtcgcggtc gacgaattga aagcggtgtt gagcaaaact ctcgacggcg attatcaagt
      961 cgaaaaacgc atgactctgg acgtgcgcgt gatcagcaag aaacgccgcc tgcgccgctt
     1021 tcgcgtgctc aacgacgcgg tgatcgccaa gggcgcgcgc agccggatta tcgacttgga
     1081 gacctatgtc ggcgaagaat atctgtgcac ctatcgggcc gacggcttga tcatatccac
     1141 gcccaccggt tcgacggcct attcattggc ggcggcagga ccgattctcg agccgacatt
     1201 gggcgcgatt gtgctatcgc cgatctgtcc ccacaccttg accaaccggc cgatcgtcgt
     1261 cccgagcgac gcgccgattc aagtcacttt gcgttccttt ggcgacacgg tgattcttag
     1321 cccggacgga cagaagggcg tgcgcctcaa caacggcgac aaagtcgagg cgcgcgactt
     1381 tggactgccc gtgtcgctga tcaagctgcc gtcacgcagt tactacgaaa ttctgcgcga
     1441 aaagctcaag tggggggagc gctagttcca ccggaatatg ctgcgcgagt tgcggatcaa
     1501 aaattttgcc gtgatcgacg aagtggcgct ggagctcggg ccgggactca acatcatcac
     1561 cggcgagacc ggcgccggaa agtcgatcat cttgaatgct ttggggctgg tctccggcga
     1621 acggggcagc tcggatatca ttcgccacaa ggaagacgag gcgacggtag aggcattgtt
     1681 cgacggtgtg cccaagctca tcgaggccaa gctcgccgat gccggcttcg atctcgatgg
     1741 cgagctagtg atcaagcgca tcctcaatcg ctcgggtaaa aaccgcatct atct
//
LOCUS       DATIRS010000721         3850 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_52819, whole genome shotgun sequence.
ACCESSION   DATIRS010000721 DATIRS010000000
VERSION     DATIRS010000721.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3850)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3850)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3850
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52819"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..600)
                     /gene="flgL"
                     /locus_tag="VLM90_09120"
     CDS             complement(<1..600)
                     /gene="flgL"
                     /locus_tag="VLM90_09120"
                     /inference="COORDINATES: protein motif:HMM:TIGR02550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009424 - bacterial-type flagellum hook
                     [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgL"
                     /protein_id="HSQ13168.1"
                     /translation="MRITQQTISTQVTEGLQRSFQRLARTQEAVTSGRRINHLSDDPI
                     GATRVLELRGFEQSLTQYEKNLNTALPAFEQADSVLDNVVDRLVRAKELALAMANDSN
                     SADQRVQTSKEVRELLNQVLSLANTKVENRFIFAGFVNGTPPFSEGGGVVSYSGDSGE
                     VLVQTSAASSIPMNVPGDKVFQGVGLGTGVDIFDICLDLE"
     gene            complement(603..2000)
                     /gene="flgK"
                     /locus_tag="VLM90_09125"
     CDS             complement(603..2000)
                     /gene="flgK"
                     /locus_tag="VLM90_09125"
                     /inference="COORDINATES: protein motif:HMM:TIGR02492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009424 - bacterial-type flagellum hook
                     [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HSQ13169.1"
                     /translation="MGITSTLSLAAQALKVAQLAIQTTGHNLANVATPGFSRQRVDLV
                     SAHPSFNGGVFIGQGVNATGVSRVVDHFVEAELLSLHGEVGYSDTQSRALNSIQEAFP
                     LTGGVNGALSEFFGALSDLANNPAGLAERVSVIGKARALGDTLAQTRQVLTSLQRGLD
                     QDLGSATQRLNVLTEQIAGLNNRITFTEVRGEAANDFRDQRQTLLQELVSLTGATVRE
                     SENGQVMVTVGGLLLVGGERFATLSSDAVGGNSLHLVTYQSPDGTAFDATTLFNAGKI
                     GSLLDARDTQVQGTIDEVDLLAKNLVDEVNSQHALGYGLTGAVGGNLFTPITVTAGAA
                     ANVTVDAALAADPRLLAAAAVPAALPGDNRNALALVGLRGTTIAALGGQSFEDHFFSL
                     VGDIGSQAQTAKSRVEFEQALLTETQSRRESVSGVNLDEEATKMIQFQRAFEASSMLV
                     RTADEMYQSLIDMVR"
     gene            complement(2023..2511)
                     /gene="flgN"
                     /locus_tag="VLM90_09130"
     CDS             complement(2023..2511)
                     /gene="flgN"
                     /locus_tag="VLM90_09130"
                     /inference="COORDINATES: protein motif:HMM:NF016985.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0044780 - bacterial-type flagellum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export chaperone FlgN"
                     /protein_id="HSQ13170.1"
                     /translation="MSIALERLAAILEQELTVAEELENNLAAQKQAIVDWNVEALLGQ
                     IAARESWLRLLSELEQKRSEFLNQSGMHRALTTLRQLLADLPPNGPEFRRLSDLQDRT
                     RAVFSRLQADQQNLHSVMSHISAHVQEALGAITRPALSLYGESGVVGSAPAASTLLQS
                     RV"
     gene            complement(2521..2841)
                     /gene="flgM"
                     /locus_tag="VLM90_09135"
     CDS             complement(2521..2841)
                     /gene="flgM"
                     /locus_tag="VLM90_09135"
                     /inference="COORDINATES: protein motif:HMM:TIGR03824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis anti-sigma factor FlgM"
                     /protein_id="HSQ13171.1"
                     /translation="MKITPKGAESSDLAKIVQNDKKTAVEGTNKDTMAAQRSGESASV
                     KISPEARELQRIAELARKGDQLRNAKVEALKEQIANGQYQVSEDQVAKSIARAEVMRL
                     LEKK"
     gene            complement(2958..3713)
                     /locus_tag="VLM90_09140"
     CDS             complement(2958..3713)
                     /locus_tag="VLM90_09140"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HSQ13172.1"
                     /translation="MPNPVALQPRTSPTAESADGLQRRKLAQEFTAFLYQEVLKAMRA
                     AMPQESLVEGESMSRDFFTSMMDAEVARVVARRDSSGVAKAVEKNFQRLPMELNKTQP
                     ASDPWLPATPLPLSLPAPGVVSSSFGVRADPFDGQRKFHHGVDIAAAAGAPIHAAAPG
                     RVVFSGVMPGYGNLIEVDHGGGWVTRYGHNSKNLVNVGDHVDAGRQIGLVGRTGRASG
                     DHLHFEARLDGRAVDPKMFLTAAAKGTRLSSKV"
BASE COUNT          793 a         1180 c         1042 g          835 t
ORIGIN      
        1 ttccaaatcc aggcagatgt cgaaaatatc gacacccgtc cccaggccca ctccttgaaa
       61 caccttatcg cccggcacat tcatcgggat cgaactagcc gcacttgttt gcaccaaaac
      121 ttcgccgctg tcccctgaat agctcacgac accgccgccc tcggaaaaag gcggagtccc
      181 gttgacgaat ccagcaaata taaaacgatt ttccactttt gtgttggcaa gactcaaaac
      241 ctggtttaac aactctcgga cttccttaga ggtttgcacg cgttgatccg ccgagttgct
      301 gtcattggcc attgccagcg caagttcttt ggcgcgcact aaacggtcta cgacattgtc
      361 tagcacgcta tccgcctgct caaacgccgg cagtgcggtg tttaagtttt tttcgtattg
      421 cgtgagtgac tgctcaaaac cacgcaattc taagactcgt gtcgcgccga tcgggtcatc
      481 ggataaatga ttgattcgcc gtcctgaggt taccgcctct tgcgtgcgcg ctaatcgctg
      541 gaaagagcgc tgcaacccct cggtgacttg tgtggaaatc gtttgctgtg taatccgcat
      601 gattaacgca ccatatcgat caaagattga tacatttcat cggccgtgcg cacgagcatg
      661 gacgacgctt cgaaggcccg ctgaaattga atcatcttgg tcgcctcttc atcgagattg
      721 actcccgaaa ccgattcgcg ccgcgactgg gtttcggtca atagcgcttg ctcaaactcg
      781 acccgtgatt ttgcagtctg agcctgcgaa ccgatatcgc ctaccagaga aaaaaagtga
      841 tcttcgaagc tctgcccgcc caaggcggcg atcgtcgtgc cgcgcagacc gactagcgcc
      901 agagcattgc ggttgtcacc gggtaacgcg gcaggtacgg ctgccgccgc gagcaaccgc
      961 gggtcagccg ccagcgccgc atcgacagtg acattggccg cagcgccggc ggtgacggta
     1021 atgggcgtga aaagattgcc gccaacggcg ccggttagac cgtagccaag cgcatgctgg
     1081 ctattgactt cgtcgaccaa gttcttggcc aacaggtcga cctcgtcgat ggtcccttga
     1141 acctgggtgt cgcgggcatc gagcaatgaa ccgattttac cggcgttaaa tagcgtggtg
     1201 gcgtcaaacg ctgtgccatc ggggctttga taggtcacga ggtgcaagct attgccgccg
     1261 acagcgtcgc tactgagtgt tgcaaagcgc tcaccgccga ccaatagcag gccgcccacg
     1321 gtgaccatca cctgaccgtt ttcggactcc cgcaccgtcg cgccggtaag cgagaccagc
     1381 tcttgcagca gggtctggcg ctgatcgcgg aaatcgttgg ccgcttcgcc gcgcacttcg
     1441 gtaaaagtga ttcgattgtt caatccggca atctgctcgg tcaacacgtt caaccgctgc
     1501 gtggcgctgc cgagatcctg gtccaaaccg cgctgcaatg aagtcagcac ctggcgcgtt
     1561 tgcgccagcg tgtcgcccag agcacgcgcc ttgccgatta cgctcacccg ttccgccagg
     1621 cccgctggat tgttggctag atcggacaaa gcgccgaaaa attcgctgag cgcgccgtta
     1681 acgccaccgg tcaaggggaa agcttcttgg atgctattca aggcacggct ttgggtatcg
     1741 ctgtaaccga cctcaccatg aagacttaaa agttcggctt cgacaaaatg gtcgaccacc
     1801 cgggagacac cggtggcgtt gaccccttgg ccgataaata ctccaccgtt aaacgagggg
     1861 tgggcggaaa ccagatcgac ccgttgacgc gagaaacccg gtgtcgcgac attggccaaa
     1921 ttatgaccgg tggtctggat cgccaactgc gctactttca gagcttgcgc ggcgagggac
     1981 aaagtagatg tgatacccat gaagttttac tctggccggc ttctagacac ggctctgcag
     2041 caatgtcgac gccgccggcg cgctgccgac aactcccgat tcgccgtaga gcgatagcgc
     2101 tggccgggtt atagctccca acgcctcttg cacatgggcc gagatatggc tcatgacgct
     2161 gtggagattt tgttgatcgg cctgtaaacg cgaaaacacc gcgcgggtgc gatcctgcaa
     2221 atcgctcagg cgcctaaact ccgggccgtt tggcggcaag tcagcgagca gttggcggag
     2281 cgtcgtcaag gctcgatgca tgccggactg attcaagaat tcgctgcgct tttgttccaa
     2341 ctcgctgagc aaccgcaacc aggattcacg cgcggcgatt tgcccaagca gggcctcgac
     2401 gttccaatcg acgatcgcct gtttctgcgc cgccaagtta ttttccaatt cttcggccac
     2461 cgtgagttcc tgctcgagga tagccgccaa ccgctctaat gcaatgctca tgggatggcc
     2521 ctacttcttt tccagcaggc gcatgacttc ggcgcgcgcg atgcttttgg cgacctggtc
     2581 ctcgctgacc tgatattggc cgttggcgat ttgctctttg agcgcttcta cctttgcgtt
     2641 acgcaattga tcgcctttgc gcgccaactc ggcgattcgt tgcaactctc tggcctcggg
     2701 cgagattttg acgctggccg actcgccact gcgctgagcc gccatcgtat ccttattcgt
     2761 gccctcaaca gcagtttttt tgtcgttttg aacgatctta gcgagatcgc tgctctcggc
     2821 gcctttgggg gtgatcttca tgtcttactc ctctacaggg aaactatcgg ccagtcgctg
     2881 ccggacttta agcccgcact gcttctttaa actgccaaaa agactgccaa gctatgccaa
     2941 gcctcgtcgc tactgtttta cacctttgaa ctaagccgcg taccttttgc cgcggccgta
     3001 agaaacattt tgggatccac cgcccgacca tccaggcgcg cttcgaagtg cagatgatcg
     3061 ccgctggccc ggccggtccg gccgaccagc ccaatctgcc ggccggcatc gacatgatcg
     3121 ccgacattga ccagattttt ggagttgtgg ccgtagcgcg tcacccaacc gccaccatga
     3181 tcgacttcga tcagattgcc gtaccccggc ataacgccgc taaaaaccac ccggcccggc
     3241 gccgccgcgt gaatcggcgc accagccgcc gccgcaatat cgacgccgtg atgaaacttg
     3301 cgctggccgt cgaatggatc agcgcgcacg ccgaagcttg aagaaaccac acccggcgcg
     3361 ggcaacgaga gcggcagtgg tgtcgccggc aaccacggat cgctcgcagg ttgagtcttg
     3421 ttgagctcca tggggagacg ttggaaattt ttttccaccg ccttggccac gccactggag
     3481 tcccgccgcg ccaccacacg ggccacctcg gcatccatca tcgaggtaaa aaaatcgcgc
     3541 gacatcgatt cgccctctac tagactttcc tgtggcatcg ccgcgcgcat cgctttcaat
     3601 acctcttgat agagaaacgc ggtgaactcc tgagccagct tgcgccgctg gagcccatcg
     3661 gccgactctg ccgtcgggct ggtccgcggc tgcaaggcaa ctgggtttgg caatttgatt
     3721 tccatgatcg tgacaaaatt acgctacatg acgatcagtt cagcttgcag cgcgccggct
     3781 tcgcgcaatg cctcgaatac cgcgatcaaa tcccgcggcg tcacacccaa cgagttgagc
     3841 gcttgaacaa
//
LOCUS       DATIRS010000722         3163 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_742360, whole genome shotgun sequence.
ACCESSION   DATIRS010000722 DATIRS010000000
VERSION     DATIRS010000722.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3163
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_742360"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            328..1476
                     /locus_tag="VLM90_09145"
     CDS             328..1476
                     /locus_tag="VLM90_09145"
                     /inference="COORDINATES: protein motif:HMM:NF037527.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13173.1"
                     /translation="MHSPINDYAAGIWSAAKSPCLSLYQPTHRHHPDKQQDPIRFRNL
                     VKSLDQSLRQKYTTREYEPLLEPFQVLAEDNEFWNHTLDGLDMLGAPGLFRVYRLQRA
                     VPELVVVADSFHIKPLMRIIQSADRYQVLGLNRREVKLYEGNRDALDEIELAEMVPRT
                     IRDALGEELTEPHLTVASYGAGAGGTAMRHGHGSKKDEVDIDAERFFRSVDRAILEHH
                     SRPSQLPVILAALPEHHNLFRQVSQNPFLLAGGIDKHPDAFDAGAFRDSAWHVVEPQY
                     LARLAGLVEQFGTAKSQGLGSDKPALVAEAAAAGRVATLLLEAERHIAGQIDPSSGRI
                     EYGDLSHPEIDDILDDLGELVLTKGGQVVIVAAERMPAQSGVAAIYRY"
     gene            1841..>3163
                     /locus_tag="VLM90_09150"
     CDS             1841..>3163
                     /locus_tag="VLM90_09150"
                     /inference="COORDINATES: protein motif:HMM:NF021524.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2254 domain-containing protein"
                     /protein_id="HSQ13174.1"
                     /translation="MKHRIVSIWDALNSSRWFVPSLMVLVTIGFSFATLAIDETVKRK
                     TIVQAGWLWNGGPSGARDLLSTIAGSMITVAGVVFSITIVVLALASSQFGPRLLRNFM
                     RDISNQVVLGTFISTFTYCLLILRTIRDNGASEFVPHISVTVGILSALASLGVLIYFI
                     HHVSVSIQAPMVIARVAEELDRSIARLFPEQLEQNTGAAGDKENLNTLAPDVLRPPFA
                     VPSIATGYLQAIDVEALLAIAEEKDLTLRLNYRPGHFVVAGAELVLVWPKESGDRQLA
                     DTINRSFILGAQRTEAQDVEYSVHQLVEVAVRALSPGINDPFTAMTCTDRLGAALCRL
                     AVREIPSPYRYDTSDMLRVIAPGVTFAEVTDQAFNQIRQYGRSSAAVTIRLLEVLTLL
                     AHKVRTEADRAALLRHAAMIERGGREGLPEEQDRNDVKERYRSFLTALD"
BASE COUNT          649 a          928 c          917 g          669 t
ORIGIN      
        1 acctccgccg gatcctttcc cagatccgcc ccaaccgccg ataccaccgc gtccgccgcg
       61 gacccagtgc tttgcggcgt ccggcgtgcg cagctactga tagtttgaat taaaccgttg
      121 ggcggcacag cacgacaacc tgaccctttc taatcgcgac gacgaggcgg tggagtcctg
      181 gcgcatcgtg gagcggatct tggaggcttg gggcgacggc gaggtcgcgc tccttgaata
      241 ttgcgccggt tccacatctg accaaaacaa actgcttccg gccggccggg cagggcgcgg
      301 taaaaatagc agattaggag acaaaccatg cactcaccga tcaacgatta cgcggcggga
      361 atttggagcg ctgccaaatc cccttgtcta tcgctttatc agccgacaca ccgccaccat
      421 ccggataaac agcaggatcc gatccgcttt agaaacctgg ttaaatcgct cgaccagtct
      481 ttacgccaaa aatatacaac tcgagagtac gagcccttat tggaaccctt ccaggtgctc
      541 gccgaggaca acgaattttg gaatcatacc ctggatggcc tcgacatgtt gggcgcgcct
      601 ggattgttcc gagtctaccg actccagaga gcggtccccg aactggtcgt cgtggccgac
      661 agctttcata tcaagccgct gatgcgcatc attcagtcgg ccgatcgata tcaagtcctt
      721 ggcctgaacc ggcgcgaggt caagctctac gagggcaatc gtgacgcgct cgatgagatc
      781 gagctggccg agatggtgcc gcggacaatc cgcgatgccc tcggtgagga attgaccgag
      841 ccgcacctga cggtcgcttc ctatggggca ggcgccggcg ggacggcgat gcgtcatggc
      901 cacggctcaa agaaagatga agtagacatt gacgcagagc gattcttccg cagcgtcgat
      961 cgcgccatct tggagcacca ttcgcggccg tcgcaactgc cggtgatttt ggcggcgctg
     1021 ccggagcacc acaatttgtt tcgtcaggta agtcaaaatc ccttcctgct cgctggcgga
     1081 atcgataaac atcctgatgc tttcgatgcc ggcgcgtttc gggactccgc ctggcacgtc
     1141 gtcgagccgc agtacctagc gcgtttagcc ggtctggtcg aacaatttgg cactgcaaaa
     1201 tcacaggggc tcggctccga taaaccggcg ctcgtcgctg aagctgcggc ggctggacgg
     1261 gttgcgacgc tcttgcttga agccgagcgc cacattgccg gacagattga cccaagctca
     1321 gggcggatcg agtatggcga tctctcacac cccgaaattg acgacatcct cgacgatctg
     1381 ggcgagctgg tcctgaccaa gggcgggcaa gtcgttatcg tcgcagccga gcgcatgccg
     1441 gcgcaaagcg gcgttgcggc tatttaccgc tactgacaga gaacctacga aataaacgaa
     1501 tactttatcg acctcgttgg tgagaacaac gccgtggagt tgctgggaat caaacacgcc
     1561 ggctgcaatg cggccaatgg caagaagctc ctctagtaat cttcgcgcat tgacacgctg
     1621 gacgttgcgg gggggcgcaa tgagtggacc gacttctgga cccggcagac gatccacttg
     1681 gcgaccacgg cgctgctgct tgtggggatc tttgtcggtc tggttcgatg acccaggggg
     1741 atcatgaatc gccagctcca atcgctaaac agattaactt cgggttgtcg cttgcaatcg
     1801 cggcaactca gctggtggtt ttcgcggtcg tgagtctccc atgaaacacc gaatcgtcag
     1861 tatctgggat gctttgaact caagtcggtg gtttgtgccg tcgctgatgg tgctggttac
     1921 cattggcttt tcattcgcga cgcttgccat cgacgagacg gtgaagcgaa agacgattgt
     1981 ccaggccggg tggctatgga acggcggacc gagcggcgcg cgcgacctgc tgtcgactat
     2041 cgcgggctcg atgatcacgg ttgccggcgt cgtcttctcg atcacgatcg tcgtgttggc
     2101 gctggcctcg tcgcagttcg gtccccgtct gctgcgcaac ttcatgcgcg atatcagcaa
     2161 tcaagtcgtg ctcgggactt ttatttcaac tttcacctat tgtcttttga tcctgcggac
     2221 catccgtgac aacggcgcca gtgagttcgt gccgcatatc tcggttacgg taggcattct
     2281 ctcggcgcta gcgagtctcg gcgtgctgat ttatttcatt catcacgtgt cggtatcgat
     2341 tcaggcgccg atggtcatcg cccgcgtcgc cgaagaactc gatcgcagca tcgcccgatt
     2401 gtttcctgaa caactcgaac agaacaccgg agcggcggga gataaagaaa acctaaacac
     2461 cctcgcaccg gacgtcctac gcccgccgtt cgccgtgccg agcatcgcca ccggatacct
     2521 gcaagctatc gatgtcgaag cgctgctggc aatcgccgag gaaaaagatc tcactctgcg
     2581 gcttaattat cgtcccggcc attttgtcgt cgcaggcgcc gagctggttc tcgtctggcc
     2641 caaggaaagc ggcgaccggc agctcgccga cacgatcaat cgttcgttta tcctcggggc
     2701 gcaacgcacc gaagcgcagg atgtggaata ctccgtgcat cagcttgtcg aggttgccgt
     2761 gcgcgcactt tcacctggaa ttaacgatcc ttttaccgcc atgacatgca cggatcgact
     2821 cggcgcggcc ctgtgccggc tagcggttag agagatcccg tcgccgtatc gttatgacac
     2881 gagcgacatg ctgcgcgtga tcgctccagg agtgactttc gccgaagtta ccgatcaagc
     2941 ttttaaccag attcgccagt acggccgctc aagcgcggca gtgactattc gccttttaga
     3001 agtcctaact ttgctggcgc acaaggtccg aaccgaggcg gatcgagcgg cgcttttacg
     3061 ccatgccgct atgatcgagc gcggcggccg cgaaggactg cccgaagagc aggaccgaaa
     3121 cgatgtcaaa gagcgttacc ggagtttttt aacggcgctg gat
//
LOCUS       DATIRS010000723         1744 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1430484, whole genome shotgun sequence.
ACCESSION   DATIRS010000723 DATIRS010000000
VERSION     DATIRS010000723.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1744
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1430484"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..941
                     /locus_tag="VLM90_09155"
     CDS             <1..941
                     /locus_tag="VLM90_09155"
                     /inference="COORDINATES: protein motif:HMM:NF012364.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase domain-containing protein"
                     /protein_id="HSQ13175.1"
                     /translation="DLRTFRVKAKELARDAEDEEGRIYFNALQSTFKILINSFYGYLG
                     FQMGHFNDFSAANQVTAKGRELIQSAVAWLKGKDAKIIEVDTDGIYFVPPESVRTAND
                     EEKLIDDLGEILPKGIELELDGRYPAMFSYKMKNYALLDEQGRLRIKGSGLRSRGLEL
                     FQREWLEEMLTLLLKGEKEKIPELYNRYADDVANHRKDISWLAKTETLQDSLENYQAK
                     VKAKKRNAAAPYELALKADRPYQAGDQISYYVTGGKAKVKISDNCKPASDWDAKNPDE
                     NVEHYKAKLSELYEKFKPWVEGDGAANPEPELAIGD"
     gene            987..1676
                     /locus_tag="VLM90_09160"
     CDS             987..1676
                     /locus_tag="VLM90_09160"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSQ13176.1"
                     /translation="MDNKVALITGGAKGIGRAVALDLAARGWTVAICYRTSADEAAAV
                     IAGVKQNGSGGLALQCDVSNPDAAVKLVERVHQEFGRIDALINGAGPYHRVSLLQETN
                     AGWHDMFDNNLHAVFYLTHAVLPIMKAQRWGRIVSFTMANAEQLIAQPQLTAHYIAKV
                     GLLALSRSFAKLVAADGITMNCVAPGFIDSGSAPKEELERMVKMIPAGYVGSVDDAVS
                     AVGYLLSDQAR"
BASE COUNT          432 a          506 c          484 g          322 t
ORIGIN      
        1 gcgatctgcg caccttccgg gtcaaagcca aggagctcgc ccgcgacgcc gaggacgagg
       61 aaggtcgaat ctatttcaac gccctgcagt cgacgtttaa aattctcatc aattcttttt
      121 acggctacct gggttttcag atgggccact tcaacgattt tagcgcggcc aatcaggtta
      181 cggccaaggg ccgggaactg atccagtccg ccgtcgcctg gctgaaaggc aaagacgcca
      241 agatcatcga agtcgacacc gatggtatct atttcgtgcc gccggaaagt gtcaggaccg
      301 ccaatgacga ggagaagtta atcgacgatc tcggcgagat tctgcccaaa ggcatcgagc
      361 tcgaactcga cggccgctac ccggccatgt tcagctacaa gatgaaaaac tacgctctgc
      421 tcgacgagca gggccggctg cgcatcaaag gctccgggct gcgctcgcgc ggcttggaat
      481 tgttccagcg cgaatggctg gaagaaatgc tgacgctgct gctcaaaggt gaaaaagaaa
      541 aaattcccga gctttacaac cggtatgccg acgacgtcgc caatcatcgc aaagacattt
      601 cttggctggc gaaaaccgag acgctgcaag actcactgga gaattaccaa gcgaaagtca
      661 aagccaagaa acgcaacgcc gccgcgccct atgaactggc gctcaaagcc gatcgcccct
      721 atcaggcggg cgaccagatt tcctattacg tcaccggtgg caaagccaag gtcaagatca
      781 gcgacaactg caaaccagcg tcagattggg acgcaaagaa ccccgacgaa aacgtcgaac
      841 actacaaagc gaagctcagc gaactttacg aaaaattcaa accttgggtc gaaggcgatg
      901 gcgctgcgaa cccggagccg gaactagcca tcggcgattg aaatttgatc agcgccgtat
      961 cgtaaatctc tcggctgagc tactcaatgg acaacaaagt tgcactgatc accggcggcg
     1021 ccaaaggcat cggccgcgcc gtcgcattgg acctggcagc gcgaggctgg acggtggcga
     1081 tttgctatcg caccagtgcc gacgaagcgg ccgcagtcat cgccggcgtc aaacaaaacg
     1141 gtagcggtgg attggcgctg caatgcgatg tctccaatcc tgatgccgcg gtgaaactgg
     1201 tagagcgcgt gcaccaagaa ttcggccgca tcgacgctct gatcaacggc gccggcccct
     1261 atcaccgggt gtcgctgttg caggaaacca acgccggctg gcacgacatg ttcgacaaca
     1321 acctccatgc agttttttac ttgacccacg ccgtactgcc gattatgaaa gcgcagagat
     1381 gggggcgcat tgtctccttc accatggcta atgccgagca actcatcgcc cagccccagt
     1441 tgaccgccca ttacattgcc aaagtcggct tgctggcgct gtcacgctcg ttcgctaaac
     1501 tggtcgccgc cgacggcatc acgatgaact gcgttgcccc cggatttatc gattccggca
     1561 gcgcgcccaa ggaagaactc gagcgcatgg tgaagatgat tcccgccggc tatgtcggca
     1621 gcgtcgacga cgcggtatcc gcagtgggct atctgctctc cgaccaagcg cgttaagtca
     1681 atggcgcgaa tattcagttg agcggcgcct ggggagtttg aaatgaatcg agacatcaga
     1741 gtaa
//
LOCUS       DATIRS010000724         2029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1920911, whole genome shotgun sequence.
ACCESSION   DATIRS010000724 DATIRS010000000
VERSION     DATIRS010000724.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2029
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1920911"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..892)
                     /locus_tag="VLM90_09165"
     CDS             complement(<1..892)
                     /locus_tag="VLM90_09165"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ13177.1"
                     /translation="MSFESLGDFIKAAEAVGEVQYVEGADLELDVGGLTELTAERSGP
                     MLVFDKFAGYPKGYRVCANANRTIRRFALAMDLPLDIHPLELLRRWRDKRAGSVPLSA
                     KVVKDGPILGNVQQGDDVNIEGFPAPRWHPGDGGRYIGTQDMVIVRDPEQGWVNMGCY
                     RAMVQRRDRVSLWINPQKHGRILAQKYWRDGKAAPVAVVFGCEPVTWMTASMSPPFGT
                     SEYELAGAYRGSPVDVVELPLTNLPVPAHAEIVIEGEIPPESEETAIEGPFGEWPGYY
                     THQGPEAVVRIKRIYYRDNPI"
     gene            complement(957..1166)
                     /locus_tag="VLM90_09170"
     CDS             complement(957..1166)
                     /locus_tag="VLM90_09170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13178.1"
                     /translation="MKDIPALKTVILASDEGVGPYKVKGIGENPISPAAPAIANAIED
                     AVGVRIRDLPMTAEKVYAAMRLKSQ"
     gene            complement(1200..>2029)
                     /locus_tag="VLM90_09175"
     CDS             complement(1200..>2029)
                     /locus_tag="VLM90_09175"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSQ13179.1"
                     /translation="MDPYEFRLKNLMEEGDITLTGGHYEAIKAKETLKAAAKAAGYST
                     PKGKYIGRGVAMGYRGPGGGTTSLKVALNPDGSIVIHTSFFEQGTGTYTTLRQIAAEE
                     LGCKPAEIEIRTLDTDSGVSSDTGLGGSRGTRVASGAAFQAARAAKEELLGLAETMLG
                     WTKSDTVLAGKNIVNKKNKKQQHWSELLARAGRSITGESFNKDDDHSPVTAFAAQVAE
                     VAVDPQTGEVTLRKLTTAHDTGMIMNPVGHQGQIDGGVVQGIGYGLIEYLPVQDGRV"
BASE COUNT          352 a          657 c          589 g          431 t
ORIGIN      
        1 tgatcggatt gtcgcgatag taaatccgct ttatgcgcac caccgcttcc ggtccctgat
       61 gcgtgtagta gccgggccat tcgccgaatg gcccttcgat ggcggtctct tcgctttccg
      121 gcgggatctc gccttcgatg acgatctccg cgtgcgccgg cacgggcagg ttggtcagcg
      181 gcagctcgac gacatcgacc ggactaccgc gataagcgcc ggcgagttcg tactcggaag
      241 tcccgaaagg gggcgacatc gacgccgtca tccaggtcac cggctcgcag ccgaacacca
      301 ccgccaccgg cgcggccttg ccgtcgcgcc aatacttctg cgcgaggatg cggccatgtt
      361 tctgcggatt gatccacagg ctgacacggt cgcgccgctg caccatggcg cggtagcaac
      421 ccatgttgac ccagccctgc tcgggatcgc gcacgatcac catgtcctgg gtgccgatat
      481 agcgcccgcc gtcgccgggg tgccagcgcg gcgcggggaa accttcgatg ttcacgtcgt
      541 cgccctgctg cacattgccg agaatcggcc cgtcctttac gaccttcgcg gaaagcggca
      601 cggagccggc gcgcttgtcg cgccagcggc gcaagagttc caatggatga atgtcgaggg
      661 gcaaatccat cgccaaggcg aatcgtcgaa tcgtccggtt ggcgttggcg cacacgcgat
      721 agcctttcgg atagcctgcg aacttgtcaa acaccagcat cggcccgctg cgctccgccg
      781 tcagctcggt cagtccgccg acgtcgagct ccaagtcggc gccttccacg tactgcactt
      841 cgccgaccgc ttccgccgct ttgataaaat cgcccaaaga ctcaaatgac attgatcctc
      901 ctgatgcagt aaggagtaag tagtcaggag caaggagtcc cccctctgac cactgactac
      961 tgacttttca gccgcatcgc ggcgtaaact ttctccgccg tcatcggcag atcgcgaatc
     1021 cgcaccccga ccgcgtcttc gatcgcattg gcgatcgccg gcgccgccgg gctgatcgga
     1081 ttctcgccga tacctttgac tttgtatggg ccgacgcctt cgtcgctcgc aagaattact
     1141 gtcttgagag cggggatgtc tttcactgtg ggaattttat actcgccgaa gttggctacc
     1201 tagaccctgc cgtcctgcac cggcagatac tcgatcaagc cataaccgat tccttgcacg
     1261 acgccgccgt cgatctggcc ttgatggccg acgggattca tgatcatgcc tgtgtcgtgc
     1321 gccgtcgtca gcttacgcaa cgtaacttcg ccggtctgcg gatcgacggc gacctcagcg
     1381 acctgagcgg caaaagcggt gaccggagaa tgatcatcgt ccttattaaa ggactctccc
     1441 gtgatcgagc ggccggctcg tgccagcagt tcactccaat gctgttgctt cttgttcttc
     1501 ttgttgacga tgtttttacc ggcgaggaca gtatcgctct tcgtccagcc cagcatcgtc
     1561 tcggcgagcc ccagcaattc ctctttggcc gcgcgcgccg cttgaaatgc cgcgccgctc
     1621 gcgacgcggg tgccgcggct gccgccgagc cccgtgtcag aagaaacccc ggagtcggtg
     1681 tcgagagttc tgatttcaat ctcggccggc ttgcagccga gctcttcggc ggcgatctgt
     1741 ctaagcgtcg tataagtgcc ggtcccctgc tcgaagaaag atgtgtgaat cacgatcgaa
     1801 ccgtcggggt tgagggcgac cttgagcgac gtggtgccgc cgcccggccc gcgataaccc
     1861 atggcgacgc cgcggccgat gtattttcct ttcggcgtcg aatagccggc ggctttcgct
     1921 gccgccttga gcgtctcctt ggctttgatt gcttcgtagt gaccgccggt caacgtgatg
     1981 tcgccttcct ccatgagatt cttcaggcga aactcgtagg gatccatgc
//
LOCUS       DATIRS010000725         1672 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1037256, whole genome shotgun sequence.
ACCESSION   DATIRS010000725 DATIRS010000000
VERSION     DATIRS010000725.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1672)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1672)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1672
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1037256"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..432)
                     /locus_tag="VLM90_09180"
     CDS             complement(<1..432)
                     /locus_tag="VLM90_09180"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13180.1"
                     /translation="MLYPTAALAIGLVQDTNWAASVARAYNNWFHARYIKKDSRLKGV
                     AVLPVQDPKAAVEELRYAIEKLDMVGAFLPSATVLNKAFGHPDFHPIFRAAEELGVPL
                     GIHGAPSRGFGFDYFEDQGQVHALEHPFPLMIQFTSIVCDGV"
     gene            complement(442..666)
                     /locus_tag="VLM90_09185"
     CDS             complement(442..666)
                     /locus_tag="VLM90_09185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13181.1"
                     /translation="MTRPKVSDADGHIYENHEEIEEYFEGKYRGMRRARAYALFPSLD
                     GWPRGLGAGRPDKVTETRPEDVIKFVDNMG"
     gene            830..>1672
                     /locus_tag="VLM90_09190"
     CDS             830..>1672
                     /locus_tag="VLM90_09190"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13182.1"
                     /translation="MSRNGIPVIDGDGHVMEDWDALLQYMPEPYIKSGRFKGRIFPPL
                     DHLHSASLFQLVPGAFKQVREDGWLEFMEDVGIERAVLYSTGGLAFGKVITLEFAIDV
                     ARAWNNWFADTYLKKSPRFQGLALIPLQEPEEAVKEMRRAVTELGFCGVMLPSTGFKG
                     HLGSKEYWPVYAEANRLGCCIGVHGGAHEGLGMDYLTPYAPINGLGHPFGQMVAFAGI
                     IFNGIFDKYPNLRIGFMEAGVSWLQTCLERFDRGWETHIQYDPRHEYIDLKPGEKVSD
                     YIRRH"
BASE COUNT          345 a          457 c          515 g          355 t
ORIGIN      
        1 cacgccgtcg cacacgatgc tggtaaactg aatcatcaac gggaatggat gctccagtgc
       61 gtgaacctgg ccttggtctt caaagtagtc gaagccgaaa ccgcggctcg gcgcgccgtg
      121 aatgccgagc ggcacgccaa gctcttcggc agcgcgaaag atcgggtgaa agtcgggatg
      181 gccgaaggcc ttgttcaaga ccgttgcgga cgggagaaac gcgccgacca tgtcgagctt
      241 ctcgatcgcg tagcgcagct cttcgacggc ggctttgggg tcctggaccg gcagcacggc
      301 gacgcctttg aggcgcgagt ccttcttgat gtagcgggcg tgaaaccaat tattgtaagc
      361 gcgcgctacc gacgcagccc agttcgtatc ttgcaccaag ccaatggcga gcgcggcagt
      421 gggatagagc acggtgcttt cctagcccat gttgtcgacg aacttgatca cgtcttcggg
      481 ccgggtttca gtgaccttgt ccggccgccc cgcgccgagg ccgcgcggcc aaccgtcgag
      541 ggaagggaac aaagcatagg cccgcgcgcg acgcatgccg cgatactttc cttcgaaata
      601 ctcttcgatc tcttcgtggt tttcgtaaat gtgaccgtcg gcgtcgctga ctttgggacg
      661 tgtcatagaa ttcctcctcg cttgtctcgg cgaaacgtag aacgtgaaag ttatagtgtc
      721 aagggaatcg cctgatcgat gcatggttcg ataatactcg ttgcctggga ccgcggttct
      781 gcggtagaga ttagaaaaat gggcattcgc gcgaagggag gatccgacta tgtctcgcaa
      841 tggaattccc gtcatcgacg gcgacggtca cgtcatggag gactgggacg cgttgttaca
      901 atacatgccg gagccctata tcaagagcgg caggttcaaa gggcggatct ttccgccctt
      961 ggatcatttg cactcggcca gtttgtttca actcgtgccc ggcgcgttta agcaggtgcg
     1021 cgaagacggc tggctggagt ttatggaaga tgtcggcatc gagcgcgcgg tgctttacag
     1081 caccggcggt ttggccttcg gcaaagtgat cacgcttgaa ttcgccatcg atgtcgcgcg
     1141 cgcctggaac aactggttcg ccgatactta tttgaaaaag agcccgcgct tccaaggatt
     1201 ggctttgatt cctctccagg aacccgaaga ggcggtgaaa gaaatgcgcc gggcggtgac
     1261 cgaactgggc ttttgcggcg tgatgttgcc gtcaacgggg ttcaaagggc acctgggcag
     1321 caaagaatac tggccggtat acgccgaggc caatcgtctc ggctgctgta tcggcgtgca
     1381 cggcggcgcc cacgaggggc tgggcatgga ttacttgacg ccctatgcgc cgatcaacgg
     1441 cctcggccat ccgtttggcc agatggtggc gttcgcggga atcatcttca acggcatttt
     1501 cgacaagtat ccgaacctgc gcatcggttt catggaagcg ggcgtgtcct ggctgcaaac
     1561 ctgtctggag cgcttcgatc gcggctggga aacccatatt caatacgatc cacgccatga
     1621 gtacatcgat ctcaaaccgg gtgaaaaagt cagcgactat atccgccgcc at
//
LOCUS       DATIRS010000726         1706 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_53041, whole genome shotgun sequence.
ACCESSION   DATIRS010000726 DATIRS010000000
VERSION     DATIRS010000726.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1706
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53041"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..963
                     /locus_tag="VLM90_09195"
     CDS             <1..963
                     /locus_tag="VLM90_09195"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HSQ13183.1"
                     /translation="CIGDKGTVFVSNRILDKVYAIVERNGKRETKVIASGLDRPNGLA
                     FHKGTLYVAEGTKISKLENIEGNLDNPPKPVMIYSDFLNHQSHGWKFMGLGPDNNLYV
                     NVGAPCNICEPPPTNGQIRRVNLDGSGAEVAARGVRNSVGFDWHPVTKELYFTDNGRD
                     WLSEDLPEDELNRVTKIGQHFGFPYCHQGNFTDREMGWGRSCDEFEKPVALVGPHSAA
                     LGMRFYTGKMFPSQYRNAIFIARHGSWNRTKKVGGDVIVVKLNKDGSVRSQEPFLTGF
                     LQNNEYSGRPVDVQVLKDGSLLVSDDHAGAVYRVTYGSAKGAAR"
     gene            1029..1604
                     /locus_tag="VLM90_09200"
     CDS             1029..1604
                     /locus_tag="VLM90_09200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13184.1"
                     /translation="MPALMCVVATALFLSSALPANSATFDERLAVCLACHGANGESAV
                     SEVPSLGGQPVFYLTVQLLMFRDKLRVVEPMNQMMQGLTNDDLRNMAASLAKLPPPDP
                     AGGSIDPARMTRARALIEQHRCNFCHQGNYSGEQNVPRLAGQREDYLAKAMRKYKNNT
                     RRGYDASMADVLFTVTNEQILDLAYFLSRLR"
BASE COUNT          376 a          541 c          462 g          327 t
ORIGIN      
        1 tgtatcggcg acaagggaac cgtgttcgtc agcaatcgca ttctcgacaa agtttacgcc
       61 atcgtcgagc ggaacggcaa acgcgagacc aaagtcattg cctcgggcct ggaccggccc
      121 aacggccttg cctttcacaa gggcacgctc tatgtcgccg aaggcacgaa aatttccaag
      181 cttgaaaaca tcgaaggcaa cctcgacaat ccgcccaagc ccgtgatgat ctacagtgat
      241 tttctcaacc accagtcgca cggctggaag ttcatgggcc tggggccgga caacaatctc
      301 tacgtcaacg tcggcgcgcc gtgcaatatc tgcgagccgc cgccgaccaa cggccagatc
      361 cggcgcgtca acttggatgg cagcggcgcc gaagtggccg cgcgcggcgt gcgcaactcg
      421 gtcggcttcg actggcaccc ggtgacgaag gagctctatt ttaccgacaa cgggcgcgac
      481 tggttatcgg aagatctgcc cgaagacgag ctcaaccgcg tcaccaagat cggccagcac
      541 ttcggctttc cgtattgcca ccaaggcaat ttcaccgacc gcgaaatggg ctggggacgc
      601 tcctgcgacg agttcgaaaa gccggtcgcc ttggtcggtc cgcactccgc cgccctcggc
      661 atgcgctttt acacgggcaa aatgtttccg agccaatacc ggaacgccat cttcatcgcg
      721 cgtcacggct cgtggaaccg gactaagaaa gtcggcggtg atgtcatcgt cgtgaagctg
      781 aacaaagacg gcagtgtgcg atcgcaagaa ccgtttctca ccggcttttt gcaaaacaac
      841 gaatacagcg gccgtcccgt cgacgtgcaa gtcttgaaag atggttcgtt gctcgtctca
      901 gacgaccacg ccggcgcggt ctatcgggtg acgtatggca gcgccaaggg cgcggcgcgt
      961 tgagaagaac cgaatccggg gcggatcgcc gcccgctttt ttcaatcaaa tcgggcaccc
     1021 gacatccaat gccggcgctc atgtgcgtcg tcgccaccgc gcttttctta tcgtcggcgt
     1081 tgcctgccaa cagcgccacc ttcgatgaga ggcttgccgt ctgtctcgct tgccacggcg
     1141 ccaacggcga atcggcggtc tccgaagtgc cctccctcgg tggtcaaccg gtcttttacc
     1201 tgaccgtcca gttactcatg ttccgcgata aactgcgcgt cgtcgaaccg atgaaccaga
     1261 tgatgcaagg actcacaaac gacgatctgc gcaacatggc ggcatctctc gcaaagctgc
     1321 cgccgcccga tcctgccggc ggctcgatcg acccagcgcg aatgacgcgc gcccgcgcgc
     1381 tcatcgagca gcaccgctgc aacttctgcc atcaaggaaa ttattctgga gaacaaaatg
     1441 ttccccgtct tgccggccag cgcgaagatt atctcgcgaa agccatgcgc aaatacaaaa
     1501 acaacacccg ccgcggctac gacgcctcaa tggcggacgt tcttttcact gtgactaacg
     1561 agcagattct cgatctcgcc tatttcctgt cgcgcttgcg ctgatccctc atcggcacag
     1621 cgtccgcgca agaaacgaat cgacaaaaat gttttatgcg gtctcaaagc catccgatca
     1681 ggataaagtg tcgtcctgac agtcaa
//
LOCUS       DATIRS010000727         1611 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1726035, whole genome shotgun sequence.
ACCESSION   DATIRS010000727 DATIRS010000000
VERSION     DATIRS010000727.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1611
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1726035"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            319..1509
                     /locus_tag="VLM90_09205"
     CDS             319..1509
                     /locus_tag="VLM90_09205"
                     /inference="COORDINATES: protein motif:HMM:TIGR04053.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04053 family radical SAM/SPASM
                     domain-containing protein"
                     /protein_id="HSQ13185.1"
                     /translation="MDFNQRPFTVVWETTRSCDLACLHCRAEANPQRSAGELTFAEVQ
                     ELVFGIKAFGKPYPLFILTGGDPAKRSDIFDIISYARAEGLRVAMTPSATPLITREAV
                     TRFADAGLVRLALSLDGKDAPAHDGFRGVAGSFDRTLQILDWCREVGLETQIHTTVTR
                     HVLDDLPAIADMIAQRAIKLWALFLLIAVGRAARPEVRRLNLNARQLESLFHWLYDLT
                     KSAPFDVTPREGYHYRRVLLQRRAAELGITTDDLLADAEKWRWTPTDLASSAQATRIV
                     RAPLGVNDGKGIVFVSHQGDVQPSGFLNLVGGNLRSASLPDIYRNSPVFLRVRDYSQI
                     KGKCGVCEFKNICGGSRSRAYAVTGDSMRSDPYCVYQPAAWQARRSPGNPQAEDRGQQ
                     GCSH"
BASE COUNT          345 a          451 c          471 g          344 t
ORIGIN      
        1 aacagaaatt cgcgcatgat gactccttcg aaaattggca catcgctggt ggtgaaactg
       61 ccgtgccatc ttgatgatgc gatgttctta ggtctcgtcg tttcgaagat ttttgcccat
      121 cctccatcaa gaaaagcgag cgtggaagcg cgactcaaat gacggcgaac cgtcgagttg
      181 tttcccaaaa acgagaactt cgcttcaggt atttctcaag tgcaataacg cgccgggcga
      241 ctggcgataa aatactttcc acaagtcacg tttcccgtgg gccgtgtatg gcacgcaaca
      301 tgctgggtta ccggactaat ggatttcaat caacggccct ttacggtggt gtgggaaacc
      361 acccgctcct gtgatcttgc ctgtttgcac tgccgcgctg aagcgaatcc gcagagaagc
      421 gccggagaac tgactttcgc ggaagtacaa gaactggttt tcggcatcaa agcgtttggc
      481 aagccctatc cgctatttat tttaaccggc ggcgacccgg caaagcggtc tgatatcttt
      541 gatattatct cctacgcgcg tgccgaaggg ctgcgcgtgg caatgacccc ttcggcgacg
      601 ccgctgataa ctcgggaggc ggtcacgcgc tttgccgacg ccggactggt tcgtttggct
      661 ctgagcctcg acggcaaaga tgcgccggcc cacgatggct ttcgcggtgt cgcgggatcc
      721 ttcgaccgta ctctgcaaat tctcgattgg tgccgcgaag ttggacttga aacgcagata
      781 cacacgacgg taacgcgcca tgtgctggat gatctaccgg cgatcgccga tatgatcgcc
      841 caacgcgcta tcaaactctg ggcgcttttc ctcttgatcg ccgtgggcag ggcggcgcgc
      901 ccggaagtgc gccgcctcaa tctcaacgcg cgccagttgg agtcgttatt ccactggctc
      961 tatgacctga ccaagtccgc gccgttcgat gtcacgccgc gcgaagggta tcactaccgg
     1021 cgtgttttgc tgcagcgaag agcggcggaa ctgggcatca ccaccgacga tttactggcg
     1081 gacgcagaaa aatggcgctg gacgccgacg gatcttgcgt cttcggcgca ggcgacgcgg
     1141 atcgtccgcg cgccgctcgg tgtgaacgac ggcaagggaa ttgtattcgt ttcacaccaa
     1201 ggggacgttc agcccagcgg gtttctaaat ctcgtcggcg gcaatctccg ctcggcctcg
     1261 ttgccggaca tctaccgcaa ttcgccggta ttcctacgcg tgcgggacta ctcccagatc
     1321 aaaggaaagt gcggcgtatg tgaattcaag aacatctgcg gggggagccg gtcgcgagcg
     1381 tatgcggtca ccggcgattc gatgcgcagt gatccttatt gtgtttatca gccggcggca
     1441 tggcaagctc ggcgctcccc cggaaatcct caagccgaag atcgcgggca gcagggatgc
     1501 tcgcattaag agttagagaa gccaaaagga gaaagaatat ggaaccgacg atctcgcagg
     1561 gatgcgctta cggccattcg gcagagaaac cgaccgagat tctcagcgat g
//
LOCUS       DATIRS010000728         1570 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_938718, whole genome shotgun sequence.
ACCESSION   DATIRS010000728 DATIRS010000000
VERSION     DATIRS010000728.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1570
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_938718"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..682)
                     /locus_tag="VLM90_09210"
     CDS             complement(<1..682)
                     /locus_tag="VLM90_09210"
                     /inference="COORDINATES: protein motif:HMM:NF013486.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family N-terminal
                     domain-containing protein"
                     /protein_id="HSQ13186.1"
                     /translation="MFYPDLTPFGVDMERLKRERLARLQGEMKQQGLGALLLTDFLNI
                     RYATNTVMMLGLRATGIQRFALIPVAGEPIICQRELARRSDYRSLRFDAYMFAMRPPV
                     ATADFVDQAIAGLKELGAAGERVGVDCLNLSAVDGLKAKGINLVDGCQAVHQARAVKT
                     TDELQLIRWTTKAKAKGYDLVRGELRKADPPEDQLSRIMLDYLMYQGFEAGSEFISIY
                     DSSTIDSRP"
     gene            998..>1570
                     /locus_tag="VLM90_09215"
     CDS             998..>1570
                     /locus_tag="VLM90_09215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13187.1"
                     /translation="MDNTLQDLLTLVEKGNVEQRCAALLVLGALKISNAATAKLVGSL
                     LESPNPVLKDYALRYFEEVQPKSNMAQLLKMLDDADKEMQERAVRSLTGVGQAVVPLL
                     IQQSKQASRTWQLNGARVLAAVRGKAALKGLLQMLSAGTDETNKVICDLMTPALREME
                     TKDLDGFYDEVEASAAKLDVKQQRPAAVSTM"
BASE COUNT          334 a          446 c          469 g          321 t
ORIGIN      
        1 gcggccgcga gtcgatggtc gaggaatcgt agattgaaat aaattcgctg ccggcttcga
       61 agccttggta cattaaataa tcgagcatga tgcggctcaa ctgatcttcc ggcggatccg
      121 ccttgcgtag ctcgccgcgc acgagatcgt aacccttggc cttggctttg gtggtccagc
      181 ggatcagttg caattcatcg gtagtcttga cggcgcgcgc ctgatgcacg gcttggcagc
      241 cgtcgactag attgattcct ttcgctttta atccgtcgac cgccgacaag ttcaaacaat
      301 cgacgccgac gcgctcgccg gcagcgccca gttctttcaa tccggcgatc gcctgatcga
      361 cgaagtctgc ggttgcgacc ggcgggcgca tggcgaacat gtaagcgtcg aagcgcaggc
      421 tgcggtagtc gctgcggcgc gccagttcgc gttggcagat gatcggttcg cccgcgaccg
      481 gaatcaaagc aaaacgctgg atgccggtgg cgcgcaggcc caacatcatg acggtattgg
      541 tcgcatagcg gatgtttaga aaatcggtga gcaagagcgc gcccaggccc tgttgtttca
      601 tctcgccttg caaacgagcc aagcgctcgc gtttcaaacg ctccatgtcg acgccgaaag
      661 gggtaagatc cggataaaac attttatctc cttggacttc gccgttcgta ccggcaatcc
      721 ggttgggagt caagctgggc gcggacgcgg tgacgggttt cgggttccga gtttaacccg
      781 aaacctctaa ctcgaaatag acgcgtcgcc tgcagcggtt cagttagatc gagatctctc
      841 acttcgttcg agatgacaaa gcgactattc tgctgtcatt tcgagcgtag cgagaaatct
      901 ctttcaagat gaagacttgt gtccgattca acctgaaacg ctgccgcgtc gccgcccgcc
      961 ttgactttta cccctggatc acgttggtaa ggagtcaatg gataacaccc tacaggacct
     1021 tctgaccctc gtggaaaagg gcaacgtcga gcagcgctgc gcggcgctgc tcgtgttggg
     1081 cgcgctgaaa atcagcaacg cggcgaccgc gaaactggtc ggcagcttgc tcgaaagtcc
     1141 caaccccgtg ctcaaagatt acgcgcttcg ctacttcgaa gaagtgcagc ccaagagcaa
     1201 catggcccag ctgctcaaga tgctcgatga cgccgacaag gagatgcagg agcgcgccgt
     1261 gcgttcgctc accggcgttg gccaagccgt ggtgccgttg ttaatccagc agtccaagca
     1321 ggcttcgcgc acctggcagt tgaacggggc gcgagtgctc gccgcggtgc gcggtaaggc
     1381 ggcgttgaag gggctgctgc aaatgctcag cgccggcacg gacgagacca acaaagtcat
     1441 ttgcgacttg atgacgccgg cgctgcgcga gatggaaact aaggatctcg atggcttcta
     1501 cgatgaagtc gaagcctctg cggccaagct cgatgtcaaa cagcaacggc cggcggcggt
     1561 ttcaaccatg
//
LOCUS       DATIRS010000729         1511 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1726107, whole genome shotgun sequence.
ACCESSION   DATIRS010000729 DATIRS010000000
VERSION     DATIRS010000729.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1511
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1726107"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..551)
                     /locus_tag="VLM90_09220"
     CDS             complement(<1..551)
                     /locus_tag="VLM90_09220"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HSQ13188.1"
                     /translation="MEQNELCYLTIAEAAAGLRHKQFSAVELADACLDRIKSHDAKLH
                     SFITLTADLALEQARRAEKELRSGVDRGPLHGIPIALKDLYATKGIRTTCHSAVLENW
                     LPNHDATTVTKLQEAGTVLLGKLGMHEFAFGGPSLDAPFPAVRNPWNTAHIPGGSSSG
                     SGAALAAGFCFGALGSDTGGSIRT"
     gene            complement(559..756)
                     /locus_tag="VLM90_09225"
     CDS             complement(559..756)
                     /locus_tag="VLM90_09225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13189.1"
                     /translation="MAEALTVENLKTIAEQRGLKLADEELQQLLPGVMRARQQAAELR
                     EVLTLPDEPAGVFNAGKEKLK"
     gene            1017..>1511
                     /locus_tag="VLM90_09230"
     CDS             1017..>1511
                     /locus_tag="VLM90_09230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13190.1"
                     /translation="MFIIEPLVAKMILPFLGGSPAVWNASLAFYQAALLIGYAYAHYL
                     GAWIGIKGQAVLHLALVAAAILLLPVTLPMQWLSTPAEHPTQLVLGALTMSIGFPLFV
                     IAAGAPMLQQWFAQSRHSASRDPYFLYAASNAGSLAGLLAYPALIEPHLTLNQQNYYW
                     FHGYL"
BASE COUNT          273 a          421 c          437 g          380 t
ORIGIN      
        1 gtgcgaatcg atccgccggt gtcggagccc agcgcgccga agcaaaagcc ggcagccaac
       61 gccgcgccgg aaccgctgct cgaaccaccg ggaatatgcg ccgtgttcca ggggtttctc
      121 acggcaggga agggcgcgtc cagcgacggg ccgccgaagg cgaactcatg catgccaagc
      181 ttgcctagta agaccgtgcc ggcttcctgg agtttggtga cggttgtcgc atcgtgattg
      241 ggtagccaat tctccaacac cgctgaatgg catgtcgtgc ggattccttt ggtcgcgtag
      301 agatctttga gcgcgatggg tatgccgtgg agcggaccgc gatcgacgcc gctacgcaat
      361 tctttctccg cccgccgggc ttgttccaag gccagatccg ccgtgagcgt gatgaaacta
      421 tgcagcttgg catcatgcga tttgatacgg tcgagacagg cgtcagcaag ttcgacagcg
      481 gaaaattgtt tgtgccggag gccggcggcg gcttcggcaa tggtcagata acagagttca
      541 ttttgctcca tggcgtggct actttagttt ctctttgccg gcattgaata cgcccgccgg
      601 ttcatccggc agcgtgagca cttctctcaa ctcggctgct tgctggcgcg cgcgcatgac
      661 tccgggcagg agttgttgca gttcttcgtc ggcaagtttc aatccccgct gctcggcgat
      721 tgtttttaga ttctcgacag tgagtgcttc ggccatattc cctcgcgcga aacgtgagtg
      781 ttcgatgcgg cgtgttggta tatgtttcta tcgaagtgtg cgccaagatg tcaattgact
      841 ggatagttcg atctgctaat ttgactggcc ggtcgtaccg attaaccgta gttaaatagc
      901 ttggcatgca actggcgtac acggcttccg acccggcaac tcacgacgca aaaccaatat
      961 cggactagag tttgatccta ctttactcgc taacattgtt cgtcaatgcg gccttgatgt
     1021 tcattattga accgttggtc gccaagatga ttttgccttt tctcggcggc agtccggcgg
     1081 tttggaacgc cagtctggct ttttatcaag ccgccctgct gatcggctac gcgtatgcgc
     1141 attaccttgg cgcgtggatc ggtatcaagg gccaggcggt tttacatttg gctcttgtcg
     1201 ccgcggcgat cctcctgctg ccggtcactc tgcccatgca atggttgtcg acgccggccg
     1261 aacatccgac tcagctcgtg cttggcgcgt taacgatgtc gatcggcttt ccgttgtttg
     1321 tgatcgcggc gggcgcgccg atgctgcagc agtggtttgc tcaaagtcgt cacagcgcgt
     1381 cgcgcgatcc ctatttttta tacgcagcga gcaacgccgg gagcttggcc ggtctgctcg
     1441 cctatccggc tttgatcgaa ccccatctga cgctcaatca gcaaaattac tattggttcc
     1501 acggttatct c
//
LOCUS       DATIRS010000730         1793 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_545209, whole genome shotgun sequence.
ACCESSION   DATIRS010000730 DATIRS010000000
VERSION     DATIRS010000730.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1793)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1793)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1793
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_545209"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..532)
                     /locus_tag="VLM90_09235"
     CDS             complement(<1..532)
                     /locus_tag="VLM90_09235"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSQ13191.1"
                     /translation="MSDLGAPLLELLAPKSGELILDLGCGDGALTEKIAAGGAAVFGV
                     DASLAQLQAARRRGLVVAAMDGQRLAVLSKFDAVFSNAALHWMKQPEMVVEGVARALK
                     PGGRFVGEFGGESNVERIRAALHAALRKRDIDPWTVDPWYYASPDEYTQLLERFGFSV
                     GAIDLVPRPTKLPGDIS"
     gene            616..>1793
                     /locus_tag="VLM90_09240"
     CDS             616..>1793
                     /locus_tag="VLM90_09240"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSQ13192.1"
                     /translation="MKKTKFPVPLKEFMATKDADLSSLRIDRTSQGASQPRRSRPIGK
                     IVAWSLVVLALAAGGLFLKQLFSPAVEVQLVTASLTSPSQANAVLTASGYVVARRKAA
                     VASKGTGTLVFLGVDEGDRVKKGQIIARLDDSDVAATLQRARENLKLAEADLYEAQKN
                     LERLRVLVQKDMIAQADYDIAEARYKRVVAGIESARFGVKEAQVAVDNTRIIAPFDGT
                     VLKKNADVGEIVAPLAGAASSKAAVVTIADMSSLEVDADVSEANITKVSPEQGCEITL
                     DAYPQQRYPGYVTKIVPTADRAKATVMVKIKFKEYDQRVLPEMSAKITFLAAGATTDS
                     ANVKALLTVPAAAVTSRNGRQVVFQIKDDRAGEVPVATGQKLGNLIEITNGLKEGDKI
                     V"
BASE COUNT          390 a          555 c          528 g          320 t
ORIGIN      
        1 ccgaaatatc tccgggaagt ttcgtcggac ggggtaccag gtcgattgcg ccaacgctga
       61 agccgaatct ttccaacaac tgcgtgtact cgtccggcga cgcgtaatac cagggatcga
      121 ctgtccatgg gtcgatatca cgcttgcgca acgccgcatg caaagccgcg cgaatccgtt
      181 ccacgttgct ctcgccgccg aactcgccga caaagcgccc gcccggtttc aacgcacgtg
      241 ctactccttc gacaaccatt tccggctgtt tcatccagtg cagcgcggcg ttggagaaaa
      301 cggcgtcgaa cttcgatagg accgcgagcc gctgcccgtc catcgcagcc accacgaggc
      361 ctcgccgcct ggcggcttga agttgcgcca ggctcgcatc gacgccgaaa acggccgcgc
      421 ctcccgcggc gatcttctct gtgagcgcgc cgtcgccgca gcccagatcc aaaatcagct
      481 cacccgattt cggcgcgagc agttcgagaa ggggcgcgcc gagatcggac aagaagcgcg
      541 cattcttggc atagctgtcg ggattccagg tcgtcgattg agtcatcgcg agttaaacta
      601 acatttcagc tcgtcttgaa aaagacgaaa ttccccgtac ccttgaaaga gtttatggca
      661 accaaggacg cggacttatc atcgttgcgg atcgatcgga cgtctcaggg agcaagtcaa
      721 ccgcgccggt caagaccgat cggcaaaatc gttgcctggt cgctggtcgt tttagctctg
      781 gcggcgggcg ggttgtttct caagcaactc ttcagccccg ccgtcgaagt tcaattggtc
      841 accgcttcac tcacttcgcc ctcccaggcc aatgccgttt taaccgccag cggctacgtg
      901 gtggcgcggc gcaaggctgc ggtcgcctcg aagggtacag gcactctggt ctttctcggc
      961 gtggacgaag gcgaccgggt aaagaaaggc cagatcatcg cgcgcctgga tgattcggat
     1021 gtcgccgcca cgctgcaacg cgcgcgggaa aacttaaagc ttgccgaggc ggatctctac
     1081 gaagcacaga aaaatttgga acggctgcgc gtgctggtgc aaaaagacat gatcgcccag
     1141 gccgactacg acattgccga ggcccgttac aaacgcgtgg tcgctggcat tgaaagcgcc
     1201 agattcggcg tcaaagaggc gcaggtcgcc gtcgacaaca cgcgcattat cgcgcccttc
     1261 gatggcacgg tgctgaaaaa gaacgccgac gtaggcgaga tcgtggcgcc cttggcgggg
     1321 gcggcgagtt ccaaggccgc ggtggtgacg atcgccgaca tgtcgtcgct cgaagtcgac
     1381 gccgacgttt cggaagccaa catcaccaag gtgtcgccgg agcagggctg cgaaataacg
     1441 ctcgacgctt acccgcagca gcgctacccc ggttacgtca ccaagatcgt gcccaccgcg
     1501 gatcgcgcga aggcaaccgt gatggtgaaa atcaagttca aggaatacga tcaacgcgtt
     1561 ctgcccgaga tgagcgccaa gatcaccttc ctcgcggccg gcgccacgac tgactcggcc
     1621 aatgttaaag cgctgctgac ggttcccgca gcggcggtga cgtcgcgcaa cggccgtcaa
     1681 gtggttttcc agatcaaaga cgaccgcgcc ggcgaggttc ccgtcgccac cggccagaaa
     1741 ctcggaaact tgatcgaaat caccaacggc ctaaaagaag gcgacaagat cgt
//
LOCUS       DATIRS010000731         1639 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1430925, whole genome shotgun sequence.
ACCESSION   DATIRS010000731 DATIRS010000000
VERSION     DATIRS010000731.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1639
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1430925"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(318..485)
                     /locus_tag="VLM90_09245"
     CDS             complement(318..485)
                     /locus_tag="VLM90_09245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13193.1"
                     /translation="MEFAGANFSRLMQRLKQLMAMFNLSTLIEAIEWAFNGAVRLKRE
                     SAARKRHGEQI"
     gene            513..>1639
                     /locus_tag="VLM90_09250"
     CDS             513..>1639
                     /locus_tag="VLM90_09250"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ13194.1"
                     /translation="MTTNPAPAPAGKLAALGYRDFRLFWSGQLISNIGTWMQMTATSW
                     LLYQLTGSAVLLGLNGIFRAIPALTLGLISGTFADRYDRRWMLLWTQVVLGALSLAVG
                     LLDDFGHIQPWHIYSFTFLSAAVGAFDGPARQAMFPALVPRSALPNAVALNSLLWKGS
                     ALIGPSLGGVAISLMGTAGAFYANALSFLVVVITLLMLRVTAKAPAKRRRHFMAETQE
                     GFKYIVARPIILGITVMEAVASVFGLDHTMLTIYASDVLRVGAHGFGLLQSARGLGAV
                     IGSGLFLAIGQKPYQGKILIVTAILYGILFGLFGLAPTFAIALALMTLIGLTDTVWGA
                     ARGTIMQMITPDNFRGRVMGVFQLSNRGLHPLGQVESGLLIP"
BASE COUNT          311 a          510 c          451 g          367 t
ORIGIN      
        1 tggagaaaag cggcggtggt gcagccggcg tagagaaaaa aggagaaacc gctcgtgtag
       61 cagagaaaat cggcgagcat tgagccgccc aagcgccatt caaggcttcg ccttatccta
      121 gcggcgccgg tgaatatttt ctgaaaagaa acatcacgac accgcaactc aactcagata
      181 ccgaagaacc aattttttct catgaccggc tgaggacgcg gaggaaagaa tttttggtaa
      241 aatattaatc cgaactctgt gaactccgcc cgactgcggt gaatccttct tcacacgaaa
      301 cctggaagaa gcttgtatta aatctgctct ccatgtcgct tccgggctgc tgattcccgc
      361 ttcaatcgaa ccgccccgtt gaatgcccac tcgattgctt cgattaaggt cgataggtta
      421 aacattgcca tcagttgttt cagccgttgc atcaaacggc tgaaattcgc gcccgcaaat
      481 tccacggatt ctacgacctt ggcaactcgc acatgaccac caacccggcg cctgcacccg
      541 caggcaaact ggccgcgctc ggctatcgcg atttccgttt gttctggtcg ggccagttga
      601 tctccaacat cggcacttgg atgcagatga cggcgaccag ctggctgctc tatcagctca
      661 ccggctcggc ggtgctacta ggcttgaacg gcatctttcg cgcgatcccg gcgctcactc
      721 tcggattgat cagcggcacc ttcgccgacc gctacgaccg tcgctggatg ctcctgtgga
      781 ctcaggtagt gctcggcgcg ctttccctcg ctgtcggctt gctggacgat ttcggccaca
      841 ttcagccctg gcatatttat tctttcacct tcttgagcgc ggcggtgggc gccttcgacg
      901 gaccagcgcg ccaggcgatg tttcccgcgc tggtaccgcg ctcggccttg cccaatgccg
      961 tggcgctcaa ctcgctcctg tggaaaggct ccgccctgat cggtccttcc ctcggcggcg
     1021 tcgccatcag cctaatgggc accgccggcg cgttttacgc caacgcgctg agcttcttgg
     1081 tcgtcgtcat cacgctcctg atgctgcgcg ttaccgcgaa agcgccagcc aagcgccggc
     1141 gccatttcat ggccgagacc caggaaggat ttaaatacat tgtcgcccgg ccgatcatcc
     1201 tcggcatcac cgtcatggag gcggtggcgt cggtgttcgg cctggaccac accatgctga
     1261 cgatctacgc cagcgacgtg ctgcgcgtcg gcgcccatgg cttcggtctg ttgcaatcgg
     1321 cgcgcggcct cggcgcggtg atcggctccg ggctgtttct cgccatcggc caaaaaccct
     1381 atcagggcaa aatcctcatc gtcacggcga tcctgtacgg catattgttt ggactgttcg
     1441 gcttggcgcc gaccttcgcg atcgccttgg cactgatgac tttgatcggt ctcaccgaca
     1501 ccgtctgggg cgcggcgcgc ggcacgatca tgcagatgat cacaccggat aattttcgcg
     1561 gccgggtgat gggcgttttt caattgagca accgcggcct gcacccattg ggtcaagtcg
     1621 aatcaggctt gttgattcc
//
LOCUS       DATIRS010000732         1673 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1529598, whole genome shotgun sequence.
ACCESSION   DATIRS010000732 DATIRS010000000
VERSION     DATIRS010000732.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1673
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1529598"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..633
                     /locus_tag="VLM90_09255"
     CDS             <1..633
                     /locus_tag="VLM90_09255"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSQ13195.1"
                     /translation="PPLFFQPLLEFFCLQIPAAKLYPLYFYFLILLMVFVIIIVTQRL
                     EKSRVGRAWKAIREDEIAAAAMGVPVVRMKLLGFAVGASFASAVGVLFAAKQVFINPE
                     SFTFMESIGVLAMVILGGMGSVPGAILGATGVTILNLQLLKGLSLWLNGLRQSGAELV
                     IPLLGSYPLSQLPAQFEPAKYERMVFGLILMLMMIFRPQGILPPRQEPRK"
     gene            635..1420
                     /locus_tag="VLM90_09260"
     CDS             635..1420
                     /locus_tag="VLM90_09260"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ13196.1"
                     /translation="MALLELRGISKRFGGLQALARVSMELDDGVIASLIGPNGAGKTT
                     LFNTLTGLYRPDEGEIRFQDRSLVGMNPEKITRAGISRTFQNIRLFSHMTVLDNVLVG
                     RHARLNTSLAEILLSSKGFHTQENNARRKALELIELTGLSGRENEWAQQLSYGEQRRL
                     EIARALAAEPKLLLLDEPTAGMSTSEAQALMTLFKELVGRYVKAILLIEHNMRVVMGI
                     SQCVHVLDYGEKIAEGHPDQVRQDPRVIEAYLGTGSWVTNAQS"
     gene            1407..>1673
                     /locus_tag="VLM90_09265"
     CDS             1407..>1673
                     /locus_tag="VLM90_09265"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSQ13197.1"
                     /translation="MLKVDGLHVYYDAIHALKGVSFAVEQGELVTLLGANGAGKTTTL
                     KTLSGLLRPRQGSVLLHGIALDTVEAHDIVRRGVAHVPEGRKVFP"
BASE COUNT          315 a          486 c          509 g          363 t
ORIGIN      
        1 ccaccgctgt tttttcagcc gctattggaa ttcttctgtt tgcaaatccc cgcagccaag
       61 ctttacccgc tgtattttta ttttttgatt ctcttgatgg ttttcgtaat tattattgtc
      121 acccagcggc tggaaaaatc gcgcgtgggc cgcgcttgga aggcgatacg cgaagacgag
      181 attgccgccg cggcgatggg cgtgccggtg gtgcggatga aacttttggg ctttgccgtc
      241 ggcgcgtcct tcgcgtccgc cgtcggcgtt ctattcgccg ccaaacaggt tttcatcaat
      301 ccggagagct ttaccttcat ggaatccatc ggcgtgctcg cgatggtcat cctgggcggc
      361 atgggctccg tacccggcgc gattctcggc gccaccggcg tgacgattct caacttgcaa
      421 ttgctcaaag gcttgtcgct ttggctcaac ggcctgcgcc aatcgggggc ggagttggtg
      481 ataccgctgc tcggcagcta ccccttgagc cagttgccgg cgcagttcga gccggcgaag
      541 tacgagcgca tggtgttcgg tttgatcttg atgctcatga tgatctttcg tccgcaaggc
      601 attttgccgc cgcgccagga gccgaggaag taacatggcg ctactcgagc tgcgcgggat
      661 ttccaaacgc ttcggcggat tgcaggcgct ggcgcgcgtc agcatggagc tggacgacgg
      721 cgtgatcgcc tcgctcatcg gccccaacgg cgctggcaag accacgctgt tcaatacttt
      781 gaccggactg taccggcctg acgaaggcga gattcgtttc caagatcgct cgttggtggg
      841 catgaacccc gagaagatta cccgtgcggg tatcagccgg acttttcaga acattcgcct
      901 gttctcgcac atgacggtgc tggacaatgt cttggtcggc cggcacgcgc gcttgaatac
      961 cagtcttgcc gagattctct tgagttcgaa aggatttcac acccaggaaa acaacgcgcg
     1021 gcgcaaagcg ctggagttga tcgaactcac gggtctcagc ggccgggaaa acgaatgggc
     1081 gcagcagtta tcctacggtg aacaacgccg tctggaaatc gcccgcgcct tggcggcgga
     1141 gccgaaacta cttttgctag acgaaccgac ggcgggcatg agcaccagcg aagcgcaggc
     1201 gctgatgacg ctcttcaaag aactcgtcgg gcgctatgtc aaggcgatct tgctaatcga
     1261 gcacaacatg cgcgtggtga tgggcatttc ccagtgcgtc catgtgctgg actacggcga
     1321 aaagatcgcc gaggggcatc ccgatcaggt gcgccaggac ccgcgcgtga tcgaggctta
     1381 cctcgggacg gggtcgtggg tgacgaatgc tcaaagttga cgggctgcac gtctactatg
     1441 acgccatcca tgcgctcaaa ggcgtctcgt tcgccgtcga gcagggcgaa ctcgttaccc
     1501 tcttgggcgc caacggcgcg ggcaaaacca caaccttgaa aaccctttcc ggactgctgc
     1561 ggccgcggca gggcagtgtg ctgctccatg gcatcgccct cgacacggtc gaggctcacg
     1621 acatcgttcg gcgcggcgtt gcccacgttc ctgaaggccg aaaggttttc ccg
//
LOCUS       DATIRS010000733         1547 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_939313, whole genome shotgun sequence.
ACCESSION   DATIRS010000733 DATIRS010000000
VERSION     DATIRS010000733.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1547)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1547)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1547
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_939313"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..363
                     /locus_tag="VLM90_09270"
     CDS             <1..363
                     /locus_tag="VLM90_09270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13198.1"
                     /translation="KGYEITALKEITPRVHFVNNAFAAKNPDVVRGFFRAQQRALDYM
                     FENKADAAKIWIKRAEMKYPEAAVLKTWDYYNRAAMTLKPIRGVQATIEDGIRNKFLT
                     QPLTQAELNALIDLSFLP"
     gene            486..1232
                     /locus_tag="VLM90_09275"
     CDS             486..1232
                     /locus_tag="VLM90_09275"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSQ13199.1"
                     /translation="MSESTRLTAWRLGIIFGALAITESAVRLGWISTFFLAAPTRAAI
                     VLWEQLVHGNALWLTGITLFEIAACLVIATVFGVLAGFLFWRYKLIGTSYETLLAALF
                     SSPVILAYPIFLVTFGRTSAAVIALSSIFGVIPIIINTKSAFQNVNPILLQVGASMNL
                     TRKQLFRHILMPAVAPAIFSGFRLALTYILKSVLGLEYVAQVGGVGMWLSDAAFKFEV
                     EEVYAGLFGTILLSILFLYLINRIEILIRK"
     gene            1235..>1547
                     /locus_tag="VLM90_09280"
     CDS             1235..>1547
                     /locus_tag="VLM90_09280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13200.1"
                     /translation="MDKAPKPAASLAAHFQTPLGVQALTLLSLIVVWECIGRTGLLFP
                     DLFPSVVEILQSLWIYVTTPVMIPHLKASLYEVGGVGMWLSDAAFKFEVEEVYAGLFG
                     TI"
BASE COUNT          307 a          460 c          408 g          372 t
ORIGIN      
        1 aagggatacg agatcacggc gttaaaagag atcacccctc gcgtgcattt cgtcaacaac
       61 gcattcgccg ccaaaaaccc tgatgtcgtc cgcggctttt tcagagccca acaacgcgcg
      121 ctcgattata tgtttgaaaa caaagcggac gccgccaaaa tctggattaa gcgagctgaa
      181 atgaaatatc cggaggccgc cgttctcaag acttgggact actacaatcg agcggctatg
      241 accttgaaac cgattcgcgg cgtgcaggcc accatcgaag acggcatcag aaacaaattc
      301 ttgactcagc ccctgaccca ggccgagctc aacgctttga tcgatctgag ttttctaccc
      361 taatcgcttg gcgttcatcg attaaaaatg cggaagttga cacagctctc gcgcaggcac
      421 actgcgattc atctgacggt ttgaacggct tgaacgcttt gaactgattg aacgaacggt
      481 atcccatgtc cgaaagcacg cgactcaccg cttggcgctt aggcatcatc ttcggcgcgc
      541 tggccatcac cgagtcggcc gtgcgactgg gctggatcag cacgtttttt ctcgccgcgc
      601 cgacgcgcgc cgcgatcgtg ctctgggagc agctcgtgca cggcaacgcg ctgtggttga
      661 ccggcatcac gctttttgag attgccgcct gtctggtcat cgccaccgtc ttcggcgtgc
      721 tcgccggctt tctcttttgg cgttataagc tcatcggcac cagctacgag accttgttgg
      781 cggcgttatt ttcctcgccg gtgattctcg cctacccgat ttttctcgtc accttcggcc
      841 gcaccagcgc cgcggtgatc gcgttgtcgt cgatcttcgg cgtgatcccg atcattatca
      901 ataccaaaag cgcctttcag aacgtcaacc caatactgct gcaagtgggc gcgagtatga
      961 accttacccg aaagcagctg tttcggcata tcctcatgcc ggcggtcgcg ccggcgatct
     1021 tcagcggctt tcgcttggcg ctcacctaca ttcttaaatc ggttctcggc ctggaatatg
     1081 tcgcgcaagt cggcggcgtc ggcatgtggc tgtccgacgc ggcgttcaag ttcgaagtgg
     1141 aagaggttta cgccggtctc ttcggcacga tcctgctgtc gatccttttt ctttatttga
     1201 tcaatcgcat cgagattttg attaggaaat agcgatggac aaggcaccga agcctgccgc
     1261 gtccctcgcg gctcactttc aaacaccgct cggcgtgcaa gcgctcaccc tgctttcgct
     1321 catcgtcgtt tgggaatgca tcggacggac gggcctgttg tttcccgatc tatttccctc
     1381 cgtcgtcgag attctgcaat cgctctggat ctacgtgaca accccggtga tgataccgca
     1441 tctcaaagcc agcctgtatg aagtcggcgg cgtcggcatg tggctgtccg acgcggcgtt
     1501 caagttcgaa gtggaagagg tctacgccgg tctcttcggc acgatcc
//
LOCUS       DATIRS010000734         1717 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1726809, whole genome shotgun sequence.
ACCESSION   DATIRS010000734 DATIRS010000000
VERSION     DATIRS010000734.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1717)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1717
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1726809"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1351
                     /locus_tag="VLM90_09285"
     CDS             <1..1351
                     /locus_tag="VLM90_09285"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ13201.1"
                     /translation="SREIAALGLGCEQPLEIYEKWRNALAKPIEPRRVAAAPVHEIVY
                     SGDELKKFGVTGLPAPVEEPGFSGGIRATAPFITVDPQSGVRNVGMYSGHFRRDHHLI
                     AGIAPVHHAMLYHHRSAVRNKEPLPVAIVLGSLPDVTFVSADNLPYGVDELAVAGGIR
                     GRPVDVVQCKTIPVEVPAEAEIIIEGEISIELKERGEPFSDYPGYLMVEREFRSVIEV
                     KAITMRRNAIFTAILVGLPPSESNGISRTCREMMLYNFLRYSCAMPEVLEVACPEMGG
                     GWNWWVIRMSKSHPSKPRQALHAASGMDPTSKMIIVVDEDIDPKDPDMVMWAMSFAMQ
                     PHQDVEISTGRSPLLDPSAHSLMRGREERSFPGAVGCSGLLIDATRKGPFPPVGLPKK
                     SYMEQALKIWQEAEMPKLNLKTPWYGYPLGLWDDEDDRLAEKVVQGDYFQHKEVKGH"
     gene            1354..>1717
                     /locus_tag="VLM90_09290"
     CDS             1354..>1717
                     /locus_tag="VLM90_09290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13202.1"
                     /translation="MAKRDTSYEIWMRQEAIPVVEGYGVEDVTQLALQPWQRTGGKGA
                     FIDLKGMEGFTGMYVSEIPAGAALNEENHLYEELIYIIKCIGATELWSAGEEKRKMHF
                     EWQQGSLFAIPLNARHRMI"
BASE COUNT          369 a          472 c          541 g          335 t
ORIGIN      
        1 gtcgcgggag atcgccgcgc ttggtctcgg ctgcgagcag ccattagaaa tctacgagaa
       61 gtggcgcaac gccctggcaa agccgatcga gccgcgccgg gtcgccgccg cgccggtcca
      121 cgagatcgtt tatagcggcg acgagctgaa aaaattcggc gtcaccggat tgccggcgcc
      181 ggtggaagag ccgggattca gcggcggtat tcgcgccacc gcgccgttta tcaccgtcga
      241 tccgcagtcg ggcgtgcgca atgtcggcat gtacagcggc cacttccgca gagatcatca
      301 tttgatcgcc ggcatcgcgc cggtgcatca tgcgatgctt tatcaccatc gcagcgcggt
      361 gaggaacaag gagccgctgc cggtggcgat cgtgctcggc tcgttgcctg atgtgacttt
      421 tgtctcggcg gacaatttgc cctacggcgt cgatgagctc gccgtcgccg gcggcattcg
      481 cggcagaccg gttgacgtcg tgcaatgcaa gacgatccct gtagaagttc cggccgaggc
      541 cgagatcatc atcgaaggcg agatttccat cgagctcaag gagcgcggcg agccgttcag
      601 cgattatcca ggatatttaa tggtcgagcg ggaattccgc tcggtgatcg aagtcaaagc
      661 gatcaccatg cggcgcaatg ccatctttac ggcgatcctc gtcggcctgc cgccaagcga
      721 gtcgaacggc atctcgcgca cctgccgcga gatgatgctt tacaattttc ttcgctacag
      781 ttgcgccatg cctgaagtgc tcgaggtcgc gtgtccggaa atgggcggcg gctggaactg
      841 gtgggtgatc cgcatgagca agagccatcc gagcaagccg cggcaggctt tgcacgccgc
      901 ctccggtatg gacccgacca gcaagatgat catcgtcgtc gacgaggata tagacccgaa
      961 agatcccgac atggtgatgt gggcgatgag ttttgcgatg cagccgcacc aggatgtcga
     1021 gatcagcacc ggccgctcgc cgctgctcga tccgtcggcg cactcgctca tgcgcggccg
     1081 cgaggagcgc agttttcccg gtgcagtagg ctgttccggt ttgttgattg acgccacacg
     1141 gaaaggaccg tttccaccgg tggggttgcc gaaaaaatcc tacatggaac aggcgctaaa
     1201 aatttggcag gaggcggaaa tgccaaaatt gaatttgaaa acgccctggt acggttatcc
     1261 gttgggcctg tgggatgacg aagacgatcg tctcgccgaa aaagtcgtgc agggcgatta
     1321 ttttcaacat aaagaagtga aaggacactg acggtggcga aacgcgatac cagttacgaa
     1381 atatggatgc gccaagaggc gattccggtg gtcgagggct acggcgtcga ggatgtgacg
     1441 caattggcgc tgcaaccttg gcagcgcacg ggcggcaagg gggcgttcat cgacttgaaa
     1501 gggatggaag gtttcaccgg catgtatgtc agcgagattc ctgccggcgc cgcgctcaat
     1561 gaggaaaatc atctctacga agaattgatt tacattatca agtgcatcgg cgccaccgaa
     1621 ctttggtccg ctggtgaaga gaagcgcaag atgcatttcg aatggcaaca gggcagcctg
     1681 ttcgccatcc cgctcaacgc ccgccatcgg atgatca
//
LOCUS       DATIRS010000735         1998 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_939487, whole genome shotgun sequence.
ACCESSION   DATIRS010000735 DATIRS010000000
VERSION     DATIRS010000735.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1998)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1998)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1998
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_939487"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..322)
                     /locus_tag="VLM90_09295"
     CDS             complement(<1..322)
                     /locus_tag="VLM90_09295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13203.1"
                     /translation="MAIPFRADNIGSLLRPAELLEARAALRDGRMDERQVREIEDRAS
                     LQALAMQKATGVDVFTDGEYRRDIFTADITKAMDGLVPGKPVVKFEWRGRGKELAAES
                     KEGNL"
     gene            complement(457..1599)
                     /locus_tag="VLM90_09300"
     CDS             complement(457..1599)
                     /locus_tag="VLM90_09300"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13204.1"
                     /translation="MKQLAKIRTDVVGSLLRPEPVKLAYAQYDAGNIGAEELRRIEND
                     AIRQAVQLQEAIGLEVVTDGEFRRLNFQESFTASVSGFDARAADLSFVESLSREGKPL
                     QRWDPYRVADGAAILQRRPVSQRLRLVRNLPLEEYSFVSSVAQRPAKVTLVGPDRISQ
                     RFDYQNSKSIYWSIEDFIADVARIEREMIRGLVDAGCRYVQIDAPSYTAYVDAPSLDE
                     MKARDEDPAKNLMRSVNADNEILRLFDDVTFGIHLCRGNQRSMWHREGSYDAIAEMLF
                     TELRHDRLLLEYDSPRAGTFAPLRFVPKGKVVVLGLVSTKVPEIETVDDLRRRIDAAA
                     KYLPLEQLAISPQCGFASDVVGNLVSEDDQKKKLEVVVKTARQVWG"
BASE COUNT          412 a          609 c          537 g          440 t
ORIGIN      
        1 ggagattgcc ttctttcgat tcggcggcta actctttacc tctgccgcgc cattcgaact
       61 tgactacagg tttgccaggc accagcccat ccatcgcctt ggtgatatcc gcggtaaaaa
      121 tatcccggcg atactcgccg tcggtaaaga catcgacacc ggtagctttt tgcatcgcca
      181 acgcctggag gctcgcacgg tcctcgatct cgcgcacctg ccgctcatcc atccgcccgt
      241 cgcgcagcgc cgcccgcgct tcaagcaact ccgccggccg caacagacta ccgatgttat
      301 ccgcccgaaa tggtatcgcc ataaattaaa cttccttccg aggttgaact ggtgagcgga
      361 accgtatcgt tcaacagttc aaaggttcaa ccgttcaacg tccgaatccg aaaccgacct
      421 tgaacttttg aaccgttgaa ccttgaacga aattatctat ccccacacct gccgagccgt
      481 cttgacgacc acttccaact tttttttctg atcgtcttcg ctgaccagat tgccgaccac
      541 gtccgaggca aaaccgcatt gcgggctgat cgccaattgt tcgagcggca gatacttggc
      601 cgcggcgtcg atgcggcgtc tgagatcgtc gacggtttcg atctcaggca ccttggtgct
      661 gaccagtccc agcaccacga ccttgccttt gggcacgaag cgcagcggcg cgaaggttcc
      721 cgcccgcgga ctgtcatatt cgagcaagag ccgatcatgg cgcaattcgg tgaagagcat
      781 ctcggcgatg gcgtcgtaac tgccctcgcg gtgccacatg ctgcgctggt tgccgcggca
      841 gagatgaatg ccgaaggtca cgtcatcgaa gagccgcaaa atctcgttat cggcattgac
      901 cgagcgcatg agatttttcg ctggatcttc gtcgcgcgct ttcatctcat cgagagacgg
      961 cgcgtcgaca taggcggtgt agctgggcgc gtcgatttgc acgtaacggc aaccggcgtc
     1021 gaccaggccg cgaatcattt cccgttcgat gcgcgcgaca tcggcgatga agtcttcgat
     1081 gctccagtaa atcgattttg agttctgata atcgaaacgc tgggatatcc ggtccgggcc
     1141 gaccaaggtt actttggccg gccgctgagc gacactgctg acgaatgaat actcttctaa
     1201 tggcagattg cgcaccagac gaagcctttg cgacaccggc cggcgctgca agatcgccgc
     1261 cccgtcggcg acgcgataag gatcccagcg ctgcaacggt ttgccttccc gcgagagact
     1321 ttcgacaaac gatagatccg ccgcccgcgc gtcgaatcca ctcacagagg cggtgaaact
     1381 ttcctgaaag ttgagccggc gaaattcacc gtcggtgacg acctccagtc cgatcgcctc
     1441 ttgaagctgc actgcttggc gaatcgcatc gttttcgatg cgccgcaact cctcggcgcc
     1501 gatattgccc gcatcgtatt gggcgtaagc tagcttgacc ggttcaggtc gcagcagact
     1561 gccgacgaca tcggtgcgga tctttgccaa ttgcttcatg gtgtttattc cttgtgcatg
     1621 gtattagctg gtctccgcct gagcgacatc tatccgatct ctctttgcag ggtaaaatcc
     1681 aaaagctccg ccgcggtgcg cacggcagct agatctatcg tagaaggctt ttaattgtcc
     1741 aggggattct cgacggggct gcgcgcttgg cagttgaagg cgatttcgct agtatcggct
     1801 tcaaggtaat caaggcaccc atgcaatacc gttacatctc cggcgactca cacttggaaa
     1861 tcgactcgaa acattggatc gaccgcgtac cggccaagta ccgcgaccaa gtgccgcgct
     1921 tggtgcgcct gcccaacggc agcgacatgt ggatgatcgg caacaccatc aagcgcgcgg
     1981 cggccgcggc cgatcttt
//
LOCUS       DATIRS010000736         3129 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_448438, whole genome shotgun sequence.
ACCESSION   DATIRS010000736 DATIRS010000000
VERSION     DATIRS010000736.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3129)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3129)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3129
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_448438"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..629)
                     /locus_tag="VLM90_09305"
     CDS             complement(<1..629)
                     /locus_tag="VLM90_09305"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HSQ13205.1"
                     /translation="MTSSYSEKLAPVAGSTPEHVDKLRVVLNICRRMSTITDLASLQT
                     LITREAKELLQADRVSVFLFDRDNCELWSAISEEGKIMRFDARLGIAGAVAMTGQAIN
                     TANAYEHPLFYKEVDIETGYRTRNLLAVPLYSLDGAVIGVGEATNKIGGVFTDADAEI
                     LTTLAAQLADVIENSPIASELKTHKLEPRSYPATEFISGFATQKIVGMG"
     gene            1024..1773
                     /locus_tag="VLM90_09310"
     CDS             1024..1773
                     /locus_tag="VLM90_09310"
                     /inference="COORDINATES: protein motif:HMM:NF025871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing redox enzyme family protein"
                     /protein_id="HSQ13206.1"
                     /translation="MNRETFREQLLGVMERKDHWAWPAFTSGQVPRDRLHFHFEQEYG
                     TYVRDFPILVGRSYIRCPIAEIRRSLAENLYEEETGGLVAGRPHPELFLEYPRGLGMD
                     LSRFQNIQLLPAAQRYRDFLDAATESFGWDIASAIVTIFVEGSSAERAALDTRKNHPP
                     PPLEEHPLVKYYGLSVEHLALTKAHRQVEGLHRAAAWDAILDHVVPLRRGAVVRVMED
                     ALRIWQLYRDEVALVCGIQEGGMSCASAVAG"
     gene            complement(1813..>3129)
                     /locus_tag="VLM90_09315"
     CDS             complement(1813..>3129)
                     /locus_tag="VLM90_09315"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: protein motif:HMM:NF008369.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic glycerol-3-phosphate dehydrogenase
                     subunit C"
                     /protein_id="HSQ13207.1"
                     /translation="QWSDPMANNPAYDPTDPRYFDITDLRVEVERVFSLCADCRRCVK
                     YCGSFPKLFDAIDDYCVEGKYADVNTKNLKTADVDKVVDLCFQCKLCYIKCPYTPGDH
                     EWAIDFPRLMTRAKAQGVKKNGVALVDKLLGNPDLVGKLGTMTAPLANWGNENPLNRQ
                     LMESVVGIHKDKKLPPFAAQTFAAQFAKNRQTPTGEPAARVAFFSTCYVNYNQPEIGN
                     DTLDVMARNNVDVALAYESCCGMPLWHNGDMEGAVAAAERNVAYLRGFVDDGRTVIAT
                     NPTCSQMIRVEYPRLLGSEAAKKVAAATMDPMEFLAKLAADGKLNRKFKTSAGAISYH
                     IPCHLRAQNIGYKTRDVLSLLPDTQVKVVEECSGHDGTWAMKKENFEMSLKYGGRAFK
                     EMAEGDPKVTCSDCPLAAIQIEQANGKRPLNPMQILAMSYRGEAIA"
BASE COUNT          613 a          867 c          912 g          737 t
ORIGIN      
        1 tggcccatgc caacgatctt ttgggtcgcg aagccgctga taaattcggt ggcggggtag
       61 ctccgcggtt ccagcttatg agttttgagc tcgctagcaa tcggcgagtt ctcgatcaca
      121 tcggcgagct gggccgccag cgtcgtcagg atctcggcgt cggcgtcggt aaacacgccg
      181 cctattttgt tggtcgcttc gccgacaccg atgacggcgc catcgagact gtaaagcggc
      241 acggccagca ggttgcgggt gcgatagccg gtttcaatat cgacttcttt gtaaaacaat
      301 ggatgctcgt aggcgtttgc cgtgttgatg gcttgtccgg tcatcgccac cgcgccggcg
      361 ataccaaggc gggcgtcgaa gcgcatgatc ttgccctctt cggagatcgc cgaccacaac
      421 tcacagttgt cgcggtcgaa aagaaacacg ctgacgcgat cggcctgcaa cagctctttg
      481 gcttcgcgag taatcaaggt ctgcaacgag gccaggtcgg tgattgtact catgcgccgg
      541 caaatattga gcacgacgcg caacttatcg acatgttcgg gcgtgctgcc cgccaccgga
      601 gcaagttttt cgctgtaact agaagtcatc cattcctgcc taacatagtt ggcaaaaatc
      661 tgccactgct aggcccagtg aacccgaaag tgttaaactg gcaccgagac aatggatttg
      721 tcagcaataa ttcgcccagt tgttaggtac ggtgacgcca gattgcggat tgaccccttg
      781 ccacggcggg gagcgagccg ctattggctg aatgtgcttc ggttccgacg tgtcgcttag
      841 ccggctaccg tcagagcaga agcattgcgg cactgtggcc cgattcatcg atgcattcca
      901 attgcttcgc tccgatgcca gtatgctgca tgggaaaacg agtgtttctc gtaattatcc
      961 gctggcacta aggttgctcc gtcgaattgt tagacaatag tccgttagct catggaggtc
     1021 tcgatgaatc gggaaacctt tcgcgaacag cttctcggtg tgatggaacg taaggatcat
     1081 tgggcctggc cggcttttac ttcaggccaa gtacccaggg accggctgca ttttcatttc
     1141 gagcaagagt atggcaccta cgtgcgcgac tttccgatac tcgtcgggcg atcgtatatt
     1201 cgttgcccga tcgccgagat tcgccgcagt ttggcggaga atctctacga agaagaaacc
     1261 ggcggcctgg tcgccggccg gcctcacccc gagctttttc tcgaatatcc ccgcggcctc
     1321 ggtatggacc tgagccgatt tcaaaatatc cagttgttgc cggcggcgca gcgttaccgt
     1381 gattttctcg acgccgcgac tgaatccttc ggttgggata tcgcgtcggc aatcgtgacc
     1441 atctttgtcg aaggatcgag cgctgaaaga gccgcgctcg atacccggaa aaatcacccg
     1501 ccaccgccgc tggaggaaca tcccctggtg aaatattacg gactctcggt ggagcattta
     1561 gcgctgacca aagcccatcg gcaggtggaa ggactccacc gagccgccgc ttgggacgcg
     1621 atcttggatc atgtcgtgcc gctacgccgc ggcgccgtgg tgcgggtgat ggaggatgcg
     1681 ctcagaattt ggcaactcta ccgtgacgaa gttgctttag tttgcggcat tcaggagggc
     1741 ggcatgtcat gcgccagcgc ggttgctggc tgagccgaaa tatcgtcgtc gccccgtcag
     1801 ccttgcgaga ttctaagcga tcgcttcgcc gcgataactc atcgccaaaa tctgcatcgg
     1861 attgagcggc cttttgccgt tggcctgttc gatttgaatt gccgctagcg ggcagtcgga
     1921 acaggtaact ttgggatcgc cctcagccat ttccttaaac gcccggccgc catatttaag
     1981 cgacatttca aagttctctt tcttcatggc ccaagtgccg tcatgaccgg agcactcttc
     2041 gacgaccttt acctgggtat cgggcaatag cgacaagaca tcgcgggttt tgtagccgat
     2101 attttgggcg cgcaggtggc aggggatatg atagctaatc gctccggcgc tggttttaaa
     2161 cttcctgttg agtttgccat ccgccgccag tttggcgaga aactccatcg ggtccatggt
     2221 cgcggccgca acttttttgg ctgcctcgct gccgagcagg cgcggatact cgacacgaat
     2281 catctgcgag caggtcggat tggtcgcgat cactgttctg ccgtcatcga caaatcctcg
     2341 cagataggcg acattgcgct cggccgcggc gacggcgcct tccatatcgc cgttgtgcca
     2401 tagcggcatg ccgcaacagc tttcgtaggc cagcgcgaca tcgacattgt tgcgcgccat
     2461 gacatcgaga gtgtcgttgc cgatctcggg ttggttataa ttcacgtaac aggttgagaa
     2521 aaaagcgacg cgcgccgccg gctcgccggt gggagtctgg cgattcttgg cgaattgcgc
     2581 ggcgaaggtt tgcgctgcaa acggcggcag cttcttgtct ttgtggatgc cgacgacgct
     2641 ttccatcaac tgtcgattga gcgggttctc attgccccag ttggccagcg gcgcggtcat
     2701 ggtgcccaat ttgccaacca ggtccggatt gccaagcagt ttgtcgacca gcgctacacc
     2761 gtttttcttg accccttggg ccttggctcg ggtcattaag cggggaaagt cgatggccca
     2821 ttcatgatcg ccgggtgtgt aggggcattt gatgtagcac agcttgcact ggaagcacag
     2881 gtcgacgact ttgtcgacgt ccgcggtctt gagatttttc gtattgacat cggcgtattt
     2941 gccctcgacg cagtagtcat cgatggcgtc gaacagtttc gggaaactgc cgcaatactt
     3001 cacgcacctg cggcagtcgg cgcagaggct gaagacccgt tcaacttcaa cccgcaaatc
     3061 ggtgatatcg aagtatcgcg gatcggtcgg gtcgtatgcc ggattgttcg ccatcgggtc
     3121 gctccattg
//
LOCUS       DATIRS010000737         1780 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_152367, whole genome shotgun sequence.
ACCESSION   DATIRS010000737 DATIRS010000000
VERSION     DATIRS010000737.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1780)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1780)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1780
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152367"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(91..1584)
                     /locus_tag="VLM90_09320"
     CDS             complement(91..1584)
                     /locus_tag="VLM90_09320"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ13208.1"
                     /translation="MATAVATNTKTKANCDLREWLKDVKRLEQLEQISGAHWDLELGA
                     LTEIILERISTPPAVVFDNVPGFDPNRRVLVNMLETLERTALTLNLPLDLKIIPLIDA
                     LRAKLRAMQPITANVVSDGAIFENIERGDAIDLTKFPVPRWHAGDGGRYLGTAHLVVT
                     RDPETGVENVGCYRVMLQDKDKVGLYISPGKHGKMHYEKAMKAGKSFPVAMAFGQHPL
                     LYIAASQAVPFGVNEYDWAGGLIGQPIDVIEGPVTGLRFPANSEVVIEGEIIPGESMQ
                     EGPFGEWPGYYASAQRAEPFVRVKALYYRNDPIITGAAPFKPTIHGMYRSCLRAATVW
                     NGMEQAGVPDIKGVYLPPPAQRFMIVVAIKQRYPGHAKQAALVACQCHAGAYLGRYVV
                     VVDDDIDITDTNEVLWAICTRSDPATSVDLLRRCWSGPLDPIIPAGQKGFNSRMIIEA
                     VRPWEWRDKFPATSAISDETRKEFSAKWQHQLAQVQARHAQLRARGD"
BASE COUNT          372 a          527 c          516 g          365 t
ORIGIN      
        1 aacttggaca aatccccagg tagtgaatca aaaaaatgcc ggtgcgaagc cagggagcta
       61 ctttttaacc ggctttatct gatttcgacg ctagtcgccg cgggcgcgca gctgagcgtg
      121 gcgggcttgg acctgggcga gttgatgctg ccatttcgcc gagaactctt tacgcgtttc
      181 gtcactaatg gcgctggtgg cgggaaactt gtcgcgccac tcccagggcc gcaccgcctc
      241 gatgatcatg cgcgagttaa agcccttttg ccctgctgga attatgggat caaggggacc
      301 actccagcac cgtcgcagca ggtccacgga cgttgcgggg tcggagcgag tgcagatcgc
      361 ccacaagact tcgttggtgt cggtaatgtc gatgtcgtcg tcgacgacca cgacgtagcg
      421 ccccaaatac gcgccggcat ggcactggca ggcgaccagc gccgcctgtt tagcgtgacc
      481 cggatagcgc tgcttgatcg cgacgacgat cataaaacgc tgcgccggcg gcggcaggta
      541 aacgcccttg atatccggca cacccgcttg ctccatgccg ttccacacgg tcgcggcgcg
      601 caggcaggaa cgatacatgc cgtgaatcgt cggcttgaac ggcgccgcgc cggtaatgat
      661 cggatcgttg cgatagtaga gcgccttcac ccgaacgaac ggttcggcgc gctgcgcgct
      721 ggcgtaataa ccgggccatt cgccaaacgg cccttcctgc atggactcgc cgggaatgat
      781 ctcgccttcg atgactactt ccgaattagc gggaaatcgc agtccggtta cgggcccctc
      841 gatgacatcg atcggctggc cgataagacc gccggcccaa tcgtattcat tgacgccgaa
      901 cggcaccgcc tgagacgcag cgatatagag cagcggatgc tggccgaacg ccatcgccac
      961 cggaaaagac ttgccggctt tcatcgcttt ttcatagtgc atcttgccgt gtttgcccgg
     1021 agagatatat agcccgacct tgtccttgtc ctgcagcata acccggtagc agccgacatt
     1081 ttcaacaccg gtctcggggt ccctggtaac aacgaggtgc gccgtgccga gatagcgccc
     1141 gccatcgccc gcatgccagc gcggcacggg aaacttcgtc agatcgattg catcgccgcg
     1201 ctcgatgttc tcgaagatcg cgccgtcgga aacgacattg gctgtgatcg gttgcatggc
     1261 tcgcaacttg gcgcgcaagg catcaattag cggaatgatc ttcaaatcta acggcagatt
     1321 gagggtcaac gccgtccgct ccagcgtctc aagcatattg accagtacgc ggcggttggg
     1381 atcaaaaccg ggaacgttgt cgaaaactac cgcgggcggc gtagaaatcc gttcgagaat
     1441 aatttccgtc agcgcgccga gctctaaatc ccagtgggca ccggagatct gttcgagctg
     1501 ctccagccgc ttgacgtctt taagccactc gcgcaaatca caattggcct tcgttttggt
     1561 gttggtcgcc actgcggtcg ccatggaaac tcccttcggt tgactacgaa aattacccgg
     1621 aaagggtcag cgtgttggga tgaaaaatct cttcaggcgc gatggctcgt cccgaaattc
     1681 cctgggcgtg gcaataagcg aaaaacttgt cgagcacatg ccggttcgct tccaaaccat
     1741 aggcccacgg gtcggtctga aaaatctgct gctcttcggt
//
LOCUS       DATIRS010000738         2297 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_349793, whole genome shotgun sequence.
ACCESSION   DATIRS010000738 DATIRS010000000
VERSION     DATIRS010000738.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2297
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_349793"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1285
                     /locus_tag="VLM90_09325"
     CDS             <1..1285
                     /locus_tag="VLM90_09325"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HSQ13209.1"
                     /translation="GLRIPIMKLFDAGEPNKILMQIVRTNVRQPDEVIGDFYAQTACN
                     DAGGRALWEMMDEFGLDSIDSVSEEIIRRSETAVRAEIRKLPDGEWHNETWSDGFEEP
                     IVVRCAVRVAGDEIFIDFTGSSPQSTRGINVVLNYTHAYASFAIKAAICPDVPHNEGS
                     FRPVHVSAPPGSILNALDPAPVASRQVIGHFIPSAIFAALSGAMPGRLMAPGADPIWL
                     SVWRGQNPPFTLTVFQVGGTGARPTKDGLNAVGFPSGVAGVPAEVIESLSPVVLKRRQ
                     LRPNSGGAGTWRGGLGQLTEFSRRGEGKWSVSSIADRTEYAAPGLLGGKAGATGAVSL
                     ETGARLHAKALMDLKVGDVVHVDLPGGGGYGDPLKRDIERVRWDVIEGYITPKDSEQK
                     YGVAVSYTGKADDLVKLPVNWVIDHPRTAQLRSRG"
     gene            1605..>2297
                     /locus_tag="VLM90_09330"
     CDS             1605..>2297
                     /locus_tag="VLM90_09330"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ13210.1"
                     /translation="MELQGRVALVTGGAGGIGGAVVRSLAKAGISGVVVNYRKSGKEA
                     EELAGEIERAGVKSLAVQADVQSDDQVRAMMKEIQEQFGRLDIVVNNAGVTHWVNLSN
                     LEGLTDAIWDEILDVNVKGAFRCARAAARLLKVNRGMIVNVSSISGVLAPSTMSSLAY
                     GTAKAALIYLTRALAVAMAPEVRVNCVAPAFTDTPWMSQHFGAEYQEVIAKASAGYPL
                     QRIATPEDIAGAI"
BASE COUNT          472 a          637 c          747 g          441 t
ORIGIN      
        1 aggactgcgc atcccgatca tgaaactctt cgatgccggc gagccgaaca agattctcat
       61 gcagatcgtc cgcactaacg tgcggcaacc cgacgaagtc atcggcgact tctatgccca
      121 gacggcatgc aacgacgccg gtggccgcgc gctgtgggaa atgatggatg agttcggcct
      181 cgattccata gattctgttt cggaggaaat cattcgccgg tcggaaaccg cggtgcgcgc
      241 cgaaatccgc aagctgcccg acggcgaatg gcataacgaa acctggagcg acggtttcga
      301 agagccgatc gtcgtgcgct gcgcggtgag agtcgccggc gacgagatct tcatcgactt
      361 caccggctct tcgccgcaga gcacgcgtgg catcaacgtc gtgctgaact acacccacgc
      421 ctacgcgagc ttcgcgatca aggccgcgat ctgccccgac gtgccgcaca acgaaggcag
      481 cttccgtccg gtgcacgtga gcgcgccgcc ggggagtatt ctaaatgctc tcgatcccgc
      541 gccggtggcg agccgccagg tgatcggcca ttttattccc agcgcgatct tcgcggcgtt
      601 gtccggcgcc atgccgggac gactgatggc gccgggcgcc gatccgatct ggctgagcgt
      661 ctggcgcggc cagaatccgc cgttcacgtt gaccgttttc caggtcggcg gcaccggcgc
      721 gaggccgacg aaagacggct tgaacgccgt cggttttccc agcggcgtgg ccggcgttcc
      781 cgcagaagtg atcgaaagcc tatctccggt ggttttgaag cggcgccaac taaggccgaa
      841 ttcgggcggc gcgggaacat ggcgcggcgg cttggggcag ttgactgaat tcagccggcg
      901 cggcgagggt aagtggagcg tgagctccat cgccgaccga accgagtatg ccgctccggg
      961 tctgctcggc ggcaaagccg gcgccaccgg cgcagtgagc ttggaaaccg gtgcgcgtct
     1021 tcacgcgaaa gccttgatgg atcttaaggt cggtgacgtg gtccacgtgg atttaccggg
     1081 aggcggcggc tatggcgatc cgttgaaacg cgatattgaa agagtgcgct gggacgtgat
     1141 cgaaggctat atcaccccga aagactccga gcagaaatac ggtgtagcgg ttagttatac
     1201 aggtaaagct gatgatttgg ttaagctacc ggtgaactgg gtgatagatc atccgcgaac
     1261 ggcccaactt cgcagcagag gctgagagta atctttgaat tcgtgatcgt gacccggtca
     1321 gagtctctct cttcgttgag atgacagaaa aagtgatgtc gattgtctag ggtgtcattc
     1381 cgaacggcag actgtgtgaa aactcaatcg gagcccttcg actccgctca gggcgaacgg
     1441 ataagtagtc gaattctctt aacaccaccg ttcgcagtga gctagcctgt cctgagcgaa
     1501 gtcgaaggga gccatgaacg gtgttttcac acagtctgac ggagcgagga atctttcttt
     1561 gagatgtgaa atttgcaatt tgagatgctg agcgaagcga ggatatggaa cttcaaggca
     1621 gagtagcatt ggtaaccggc ggcgcgggag gtatcggcgg cgcggtggtg cgcagtctgg
     1681 ccaaagccgg gatcagcggc gtcgtcgtca actaccgcaa gtccggcaag gaggccgaag
     1741 aacttgcggg ggagatcgag cgcgctggtg tgaagtcgct cgccgttcaa gccgatgtgc
     1801 agagcgacga tcaggtgcgg gcaatgatga aggaaattca agagcagttc ggccgcctcg
     1861 acatcgtggt caacaatgcc ggcgtgaccc actgggtaaa tctttctaat ctcgaaggac
     1921 tgaccgacgc gatctgggac gagattctcg acgtcaacgt caaaggcgcg tttcgctgcg
     1981 cgcgcgcggc ggcgcggctc ttgaaagtga accgaggaat gattgtcaac gtctcgtcga
     2041 tttccggcgt gctcgcgccc tcgacgatgt cctcgctcgc ctacggcacg gcgaaggcgg
     2101 cgctgattta cttgacgcgc gccttggcgg tcgcgatggc gcccgaggtg cgggtaaact
     2161 gcgtggcgcc ggcgttcact gatacgccgt ggatgagcca gcactttggc gccgaatatc
     2221 aggaggtcat cgccaaggcc tcggcgggct atccattgca acgcatcgcc acgcctgagg
     2281 acattgcggg cgcaatc
//
LOCUS       DATIRS010000739         2418 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1235234, whole genome shotgun sequence.
ACCESSION   DATIRS010000739 DATIRS010000000
VERSION     DATIRS010000739.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2418)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2418)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2418
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1235234"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(501..893)
                     /gene="acpS"
                     /locus_tag="VLM90_09335"
     CDS             complement(501..893)
                     /gene="acpS"
                     /locus_tag="VLM90_09335"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HSQ13211.1"
                     /translation="MIISTGIDLAEVDRVQAAIEHPRFGRRFRERVFTASEIAYCEKK
                     QRGKYESYAGRFAAKEAVMKALGRGWGAKVRWLDIEVARARSGKPEIVLHDKTAQLAA
                     ALGIRRWALSITHTKQHGLASVIAEDDG"
     gene            complement(890..1228)
                     /locus_tag="VLM90_09340"
     CDS             complement(890..1228)
                     /locus_tag="VLM90_09340"
                     /inference="COORDINATES: protein motif:HMM:NF013777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSQ13212.1"
                     /translation="MKANATKCPAEFTLAMIGGRWKIPIVFHLFAGRKRFSDLARALT
                     GVSQKMLTQQLREMARDGLVTRQVYPQVPPKVEYSLTVLGASLRPVVEAMCRWGEAHG
                     VRHEVREASL"
     gene            1336..2379
                     /locus_tag="VLM90_09345"
     CDS             1336..2379
                     /locus_tag="VLM90_09345"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HSQ13213.1"
                     /translation="MLQPALKLVENQANGTVGAGARDIASRDGELLDAYSQAVVAAAE
                     SISPAVTFIEVTKEHHSSRHRPSKEPRAMRGSGSGFIFTPDGLILTNSHVVHGAGKLD
                     VALNDGRHLSATIVGDDPSSDLAVIRISAQNLSAVPLGDSEKTRVGQMAIAIGNPYGF
                     QCSVTAGVVSALGRSLRSVSGRLIDNVIQTDAALNPGNSGGPLVNSRGEVIGVNTAVI
                     LPAQGICFAVAINTAKFVVGQLIQNGRIRRAYLGVGGQNVDIPRAVARAQQLQHQTGV
                     LLISVEPSGPAERGELRVGDIIVALDDHPVRGIDDLHRLLTDARIGLRCNVALLRQSR
                     KINLSVVTQEAPL"
BASE COUNT          508 a          767 c          665 g          478 t
ORIGIN      
        1 ctcagcgatc ggcggcacgt agaaacgaag aaaactggcg tagaggagca ccgcgaaagg
       61 caagacgact ttgatgatga cgaacaggcc gatcgcgccc agcgccaaat acttccaaac
      121 cccacccacg aagatcacga agagttcgga taatttaaac gccgaacttc gtgctcttcg
      181 tgtcctcctt agaaaataca tgtgagggga tgatatgcac aacaaagagc ctgcggggct
      241 ccgtcatacc cgcgaaagcg ggtatccagg ctaattcggc gcagaacaac aaacctggat
      301 tcccgcgtgc gcgggaatga cgaatcgagg aggggagcat gttctggaat acaaaccatt
      361 ttcatgctct gtaggcgagt gcaaactcat ggacacttcg tggtaaaaac tctttcccat
      421 ctggttgcag cagcgccgcc ctgggctctt tgcggttaaa tatccggttc cgaatttctc
      481 ttttggtgaa cccattcctc tcacccatcg tcctcggcaa tcacagaagc caggccatgc
      541 tgcttggtat gggtaatcga cagcgcccaa cggcgaatgc ccagcgccgc ggcgagctgc
      601 gccgtcttgt cgtgcaaaac aatctccggc ttgccgctgc gcgcccgcgc cacttcgata
      661 tcgagccaac gcactttggc accccagccg cgcccgagcg ccttcatcac cgcttcttta
      721 gccgcgaagc gtccggcgta gctctcgtac ttgccgcgct gttttttttc gcagtaagcg
      781 atctcactgg cagtgaacac gcgttcgcga aagcgccggc cgaagcgcgg gtgctcgatg
      841 gccgcctgga cgcgatccac ttccgcaaga tcgattcccg tgctgatgat cataggctgg
      901 cttcccgaac ctcgtgccgt accccatggg cttcacccca gcggcacatc gcttcgacca
      961 ccggccgcag gctcgcaccc aaaacggtga gagaatactc aaccttaggc ggcacctgcg
     1021 gataaacttg ccgcgtcacc agaccgtcgc gtgccatttc gcgcagctgc tgggtgagca
     1081 ttttttgcga taccccggtc aaggcgcgcg ctagatccga aaaccgcttg cgcccggcga
     1141 acaaatggaa aacgatgggg atcttccatc gcccgccgat catcgccagg gtaaactccg
     1201 ccggacattt tgtcgcgttc gctttcatcg ccagctcctc ggttactctt tgggtactat
     1261 agcaccggcg ggtgcgtact taacaagcat tgcgctcgtg attagcttcg caccagaggt
     1321 gagaaaggaa ccgccatgtt acaacccgcg ctcaagctcg tcgagaatca agccaacggc
     1381 acggttggcg ccggtgcgcg cgacatcgcc agccgcgacg gcgaactcct cgacgcctat
     1441 tctcaagccg tcgtcgcagc cgccgaaagt atcagccccg cggttacgtt catcgaagtc
     1501 accaaggagc accattcatc gagacaccgg ccaagcaaag agccacgcgc aatgcgcggc
     1561 agcggctcgg gttttatctt cacgccggac gggctgatct tgaccaatag ccatgtcgtc
     1621 cacggcgccg gcaaacttga cgttgccttg aacgacggtc gccatcttag cgccaccatc
     1681 gtcggcgacg atccgagcag cgatcttgcc gtcatccgca tatcggcgca aaatcttagc
     1741 gccgtcccac tgggcgattc ggaaaaaact cgggtcggtc aaatggcgat tgccatcggt
     1801 aacccctacg gctttcagtg tagtgtcacg gccggcgtcg tcagcgccct cggtcgttcg
     1861 ctgcgctcgg tatcgggacg cttgatcgac aatgtcatcc aaaccgacgc cgcgctcaat
     1921 cccggcaact ctggcggacc gctggtcaat tcacgaggtg aagtcatcgg cgtaaacacc
     1981 gccgtcattc tgccggcgca gggaatctgt ttcgcggtag cgatcaacac ggcaaagttc
     2041 gtcgtcggac agttgattca gaatggccgc attcgccgcg cttatctcgg cgttggcggc
     2101 cagaacgtgg atatcccacg cgccgtcgct cgggcgcagc agctccaaca tcaaaccggt
     2161 gtgctgttga tctcggtgga gccgagcggc cccgcagagc gtggcgagct ccgagtcggc
     2221 gacattatcg tcgccctcga cgaccacccg gtgcgtggca tcgacgatct gcatcgttta
     2281 ctcaccgacg ctcgcatcgg gttgcggtgc aatgtcgcgc tgctacgcca atcgcggaaa
     2341 ataaatctaa gcgtggtaac ccaggaggcg ccgctctgat taccgatctt tttcctcgac
     2401 cccagctcgg cgaggctt
//
LOCUS       DATIRS010000740         1501 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1628272, whole genome shotgun sequence.
ACCESSION   DATIRS010000740 DATIRS010000000
VERSION     DATIRS010000740.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1501
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1628272"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..568
                     /locus_tag="VLM90_09350"
     CDS             <1..568
                     /locus_tag="VLM90_09350"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13214.1"
                     /translation="AGGLAAALSTADGLLLTIANAFSHDLYFNVIDPKASLTKRLTIT
                     KILLVVTALVAAWVATFRVAIIVELVAWAFSLAGASFFPALVMGIWWKRANKTGACVG
                     MIAGLAVTAYYMIGSRFYGVSWLGTQTIASAVFGLPVGFLVIWIVSLMTAAPPKEVQE
                     LVANVRYPKSGQATTGDPLGREQPAGAH"
     gene            632..910
                     /locus_tag="VLM90_09355"
     CDS             632..910
                     /locus_tag="VLM90_09355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13215.1"
                     /translation="MIEPTAQIVFLLRFVCFMAVFYLALHKIVARLSRKPESKLLWFF
                     GVLTTPLTTPVKKYSSPDATNDQIVSYSLIFYGLLWLALVFAGRYWVN"
     gene            1014..>1501
                     /locus_tag="VLM90_09360"
     CDS             1014..>1501
                     /locus_tag="VLM90_09360"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSQ13216.1"
                     /translation="MATSNPTLTDSQLALPVKHLIKRAPLFVDASVSVKQAAQAMQNA
                     RVGSMLIASEPPGIVTDRDLRGRVLAAGLGPDTPVTQVLSRPLVTIDCAAPVFAALRL
                     MLDENIHHLPVVEEGKIIGVVSATDLLLYQGRNPLYLRGVIENWQNSQAVNYAEEIGA
                     LV"
BASE COUNT          305 a          466 c          395 g          335 t
ORIGIN      
        1 ggccgggggt ctagcagccg cgctctcaac cgctgacggt ttattgctga ctatcgccaa
       61 cgccttttcc catgacttgt atttcaacgt catcgatccc aaggcatcgc tgaccaagcg
      121 ccttacgatc actaaaatac tgctggtggt caccgcgctc gttgccgctt gggtagcgac
      181 attccgagtc gccatcatcg ttgagttggt cgcctgggca tttagcttgg cgggcgcctc
      241 gttttttccg gcgctagtaa tgggcatttg gtggaaacgg gcgaacaaaa ctggcgcttg
      301 cgtcggcatg atcgctggat tggccgtaac cgcctattat atgatcggca gccgcttcta
      361 cggcgtgtcc tggttaggca cccagaccat cgcctcggct gtcttcggat taccggtggg
      421 cttcctggtc atctggatcg tctcgctgat gaccgcagcg ccgccgaaag aagtccaaga
      481 actggtcgcc aatgtgcgct acccgaagag cggccaagcc accaccggcg atccgctggg
      541 acgcgagcag ccggcaggcg cccactaaaa taagacttac ccacggcggc gagatcatct
      601 ttttatctcg ccgccgtgga cggccagtaa cttgatcgaa ccaaccgcgc aaatcgtttt
      661 tctactccgc ttcgtctgct tcatggcggt tttctatctt gccttgcaca agattgtcgc
      721 gcgcttgagc cgcaagccgg aaagcaaact gctctggttc ttcggggtgc tcaccacacc
      781 actgacaaca cccgtgaaaa agtattcatc ccccgacgcg accaatgacc aaatcgtctc
      841 ctattcgctg attttctacg gtctactctg gttagctctg gttttcgccg gccgctattg
      901 ggtaaattga atctgccaaa ccggcaattc gttatattcc tatcggaaac cttttatcct
      961 agactgaaaa catcacgcat cagcgccggt aaaatcaggc aaccgcgcat cccatggcga
     1021 cctcaaaccc taccttgacg gactcccagc tggcactgcc ggtcaagcat ctgatcaaac
     1081 gcgcgccgct gttcgttgac gccagcgtga gcgtcaaaca agccgcgcaa gccatgcaga
     1141 acgcccgcgt cggctccatg ctcatcgcca gcgagccgcc gggcatcgtc accgaccgcg
     1201 atctgcgcgg tcgggtcctc gccgcgggac ttgggccgga cactcccgtg acccaagtgc
     1261 tgtcacgccc gctcgtaacc atcgattgcg ccgcgccggt attcgccgcg ctgcgtctca
     1321 tgctcgatga aaatatccat catctaccgg tggttgaaga aggaaagata attggcgtag
     1381 tcagcgccac cgatctgctg ctctatcagg gccgcaatcc actgtatttg cgcggcgtca
     1441 ttgaaaattg gcagaactcg caggcggtga attacgccga agagatcggt gccttggtgc
     1501 a
//
LOCUS       DATIRS010000741         1835 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1333193, whole genome shotgun sequence.
ACCESSION   DATIRS010000741 DATIRS010000000
VERSION     DATIRS010000741.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1835)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1835)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1835
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1333193"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..237
                     /locus_tag="VLM90_09365"
     CDS             <1..237
                     /locus_tag="VLM90_09365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13217.1"
                     /translation="TQFGEDYVVIPYVNREQSLVAAVFFAARCDIAGCELERRAGYAI
                     TNAEGSDVKMYIDPRDRDLIALVHRFSLSKLNHN"
     gene            270..623
                     /locus_tag="VLM90_09370"
     CDS             270..623
                     /locus_tag="VLM90_09370"
                     /inference="COORDINATES: protein motif:HMM:NF024879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper domain-containing protein"
                     /protein_id="HSQ13218.1"
                     /translation="MKNTRFVSNKTALILTATLLLGGCAGGSLTTREKGAGIGALGGA
                     AVGGIVGAAVGHPAAGAAIGGGLGLGAGALVGDQLQGQENQNSRQDSEIRNNQAEIDR
                     QRYELERLRRERGEY"
     gene            complement(941..1264)
                     /locus_tag="VLM90_09375"
     CDS             complement(941..1264)
                     /locus_tag="VLM90_09375"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HSQ13219.1"
                     /translation="MRFTRRFIFFAALSVLPFAFGCQTTQPEATVAIPAVETAQDQAL
                     SKSVRERLLADKKADLSGIKVVSNNGTVYLTGLVHSLDARQQAIRLAWEVRGVQSVVN
                     SLEVK"
     gene            complement(1417..>1835)
                     /locus_tag="VLM90_09380"
     CDS             complement(1417..>1835)
                     /locus_tag="VLM90_09380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13220.1"
                     /translation="LLPHEWPIQFAAFSPNSLWLVTVTGEASSDAAEPSATALVGSTV
                     RVWEVSSARKLTEVSLAHDGGIGRTALSPDGGWLATMSRTPSGRVVLLWPLWPELLRS
                     EACKRLTRNLSKSEWLTFVRIEPQRGTCSNLPVVSE"
BASE COUNT          372 a          531 c          536 g          396 t
ORIGIN      
        1 acccaattcg gcgaagacta tgtcgtgatc ccttacgtta atcgcgaaca atcgttggtg
       61 gcggcggtct ttttcgccgc ccgctgcgat atcgcgggct gtgagcttga gcggcgcgcc
      121 ggctacgcga tcaccaatgc cgagggctcg gacgtaaaaa tgtacatcga tccgcgcgac
      181 cgcgatctga tcgcccttgt gcatcggttt agcctcagca aactcaatca caattaacgt
      241 cgtattcacg cacgagaaag gatgatttta tgaaaaatac acgcttcgtt tcgaacaaaa
      301 cggctctcat acttacggca accctgctgc tcggcggctg cgccggcggc tctctgacca
      361 ccagggaaaa aggcgccggc atcggcgcgc tgggcggagc cgctgtcggt ggcattgtcg
      421 gagcggcggt tggccatccg gccgccggcg cggccatcgg cggtgggctt ggcttgggcg
      481 caggcgcctt ggtcggcgat caactccagg ggcaggagaa ccaaaactcc cggcaagaca
      541 gcgagattcg caacaaccag gcagaaatcg accgccagcg ctacgagcta gagcggctgc
      601 ggcgtgagcg cggcgagtat tgatcggtag tttcgtcgcg ggcgatggtt gggcgccaaa
      661 cccaagcgag gtttggcgcc caactttatt taactgatat ccgacctttc ggtcttcatg
      721 acatcgggcg atctacttga acttgcatta gcccgattag acggggcgaa agaatctatg
      781 cgaaccatta cagacagcct ggttttaact tttttgctat tgcgcgcgtc gaatgggtcc
      841 acggtgcggc gcgtctccga gagtgttttg ttcgcgctga tcgttgtcag tatccttttc
      901 cgtagctcgg tgcggccaaa ctatgcaatg taaacgatga ttatttaact tcaagactgt
      961 tgacgacgct ctgcacgccg cgcacttccc aggcgagcct gatcgcttgc tggcgggcat
     1021 cgagagaatg cacgagcccg gtcaggtaga ctgtgccgtt gttggatacc accttgatgc
     1081 cggatagatc cgctttcttg tccgcgagca gccgctcccg cacggacttc gacagcgcct
     1141 gatcttgcgc cgtttccacc gccggaattg ccaccgtggc ttcgggctgc gtggtttggc
     1201 agccgaacgc aaacggcagc accgataagg cggcaaagaa aataaatcgt ctagtgaatc
     1261 gcattctcaa ctccctagca caaatggcat tttcgtacta gataattcaa tggccggcga
     1321 tcacaggggg ttcgagtgtt atgacgatcg gcgccaccta gtgccgtgct ttgcaagctg
     1381 gcgacttgta acttgctgca cagagccata tctgccctat tcgctaacga cgggaaggtt
     1441 gctacatgtg ccccgctgcg gttcgatcct gacaaaggtc agccattctg atttcgacag
     1501 attcctggtc agccgcttgc acgcttcact gcgaagtagc tcgggccaga gcggccacag
     1561 aagcaccact cggccgctcg gcgttctgct catggttgcg agccaaccgc cgtccgggct
     1621 caacgcggtt cggccaattc cgccgtcgtg ggctaacgaa acctcggtta gcttgcgggc
     1681 cgaagagact tcccatacgc gaaccgtgct gccgaccaaa gccgtagcgg acggctcggc
     1741 tgcgtcgctg ctcgcttcgc cggtaaccgt gaccagccat aggctattcg ggctgaatgc
     1801 tgcaaactgt atgggccact cgtgcggtaa taggg
//
LOCUS       DATIRS010000742         1556 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1137358, whole genome shotgun sequence.
ACCESSION   DATIRS010000742 DATIRS010000000
VERSION     DATIRS010000742.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1556
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1137358"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1094
                     /locus_tag="VLM90_09385"
     CDS             <1..1094
                     /locus_tag="VLM90_09385"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSQ13221.1"
                     /translation="DATSFNAISTLSLRDIEETGAVGICKFNKLMIISPRALSFGYRW
                     VYSLSHEYLHYAIVALSNNQAPIWLHEGMARFYETRWRKPAPVKEAHEDYLTPANQTL
                     LVQALEKNQFVGFKKMEPSLIHLDTPEQVQLAYAEAASAVDFINQSKGRVGVRELLAT
                     LKDKPTPEAVEKVYGMAFDAFETKWKAFLKAKGLKPIEGSRVRRLRVKKDQREDEEVV
                     ELREIQSAIARNRTHLADQMLAKGRPVAALNEYQRALQASPQSPVILNKLGRVMIEQN
                     RAEEALSLLKKALDIDPDSSSTYVQLGRGYHLAKNFKEARTVLEEAIQLNPFHPLIYR
                     LLTEVYAALGDAEKARQAKTTLESLGRGN"
     gene            1121..>1556
                     /locus_tag="VLM90_09390"
     CDS             1121..>1556
                     /locus_tag="VLM90_09390"
                     /inference="COORDINATES: protein motif:HMM:NF019346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSQ13222.1"
                     /translation="MEATQIEQHEIAEIEEFAEKRDAMLGEIGKVIVGQDRVIEEVLI
                     ALFARGHCLLVGVPGLAKTLLISTLAEILDLDFNRIQFTPDLMPSDITGTDILQEDAA
                     TGRRQFQFLQGPIFTNILLADEINRTPPKTQAALLQSMQEYKV"
BASE COUNT          373 a          455 c          435 g          293 t
ORIGIN      
        1 cggacgcgac tagttttaac gccatctcga cgctgtcctt gcgcgacatc gaagagaccg
       61 gcgccgtcgg catctgcaag ttcaataaat tgatgatcat ctcgccgcgg gcgctgagct
      121 tcggttaccg ctgggtctat tccctgagcc atgagtatct gcactacgcg atcgtcgcct
      181 tgtcgaataa ccaagcgccg atctggctgc acgagggcat ggcgcgcttt tacgaaaccc
      241 gctggcgcaa gccggcaccg gtcaaagagg cgcatgaaga ttatctcaca ccggccaatc
      301 agaccttgct ggtgcaggcg ctggagaaaa atcaattcgt cggtttcaaa aaaatggaac
      361 cgtcgctgat ccacttggac acaccggaac aggtgcagct ggcctatgcc gaagccgctt
      421 ccgcggtcga ctttatcaac cagagcaagg gcagggtcgg cgtgcgcgag ctgctcgcta
      481 ccctcaaaga taaaccgacg cccgaagcgg tggaaaaagt ctacggcatg gccttcgacg
      541 cctttgaaac caagtggaag gcgtttctca aagccaaggg attgaagccg attgaaggct
      601 cgcgcgtgcg caggcttagg gtcaagaaag accagcgtga agatgaagaa gtcgtcgagc
      661 tgcgcgagat tcaatccgcc atcgcgcgca accgcactca tctggccgac cagatgctcg
      721 ccaagggccg cccggtggcg gctctcaacg aataccagcg cgccttgcaa gcgagcccgc
      781 agtcgccggt gatcttgaac aaactcggtc gcgtcatgat cgaacaaaat cgcgcggaag
      841 aggctttgag ccttttgaag aaagccctcg acatcgatcc ggatagctcc agcacctacg
      901 tgcaattggg gcgcggttac cacttggcga aaaacttcaa ggaagctcgc accgtcctcg
      961 aagaagcgat ccaattgaat ccgtttcatc cgctgatcta tcgtttactc accgaagttt
     1021 acgccgccct cggcgacgcc gaaaaggcgc ggcaggctaa aaccacattg gagagcctcg
     1081 ggcgcgggaa ttaatttgca aaggaagcat cgtacccatc atggaagcca cccagataga
     1141 acaacatgag atcgccgaga tcgaagagtt tgccgaaaaa cgcgacgcca tgctcggcga
     1201 gatcggcaag gtcatcgtcg gccaggaccg ggtcatcgaa gaagttctga tcgcgctgtt
     1261 cgcccgcggc cattgtttgt tggtcggcgt gccggggctg gcgaagactt tattgatcag
     1321 caccctcgcc gagattttgg acctggattt caaccgaatt cagttcaccc cggacttgat
     1381 gccgtcggac atcaccggca ccgatattct ccaagaagac gccgccaccg ggcgccggca
     1441 gtttcagttt ttgcagggac cgattttcac caacatcctg ctcgccgatg agatcaaccg
     1501 gacgccgccc aaaacccagg cggcgctgct gcaatcgatg caggagtaca aagtca
//
LOCUS       DATIRS010000743         1819 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1628551, whole genome shotgun sequence.
ACCESSION   DATIRS010000743 DATIRS010000000
VERSION     DATIRS010000743.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1819)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1819)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1819
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1628551"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..195)
                     /locus_tag="VLM90_09395"
     CDS             complement(<1..195)
                     /locus_tag="VLM90_09395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13223.1"
                     /translation="MNTMISRIIFLIVLLLPVSGFSQIKVRAAYGTPSLSQVVFPLGV
                     QAGMFGRHGMTVEPLYIAGRS"
     gene            complement(198..695)
                     /locus_tag="VLM90_09400"
     CDS             complement(198..695)
                     /locus_tag="VLM90_09400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13224.1"
                     /translation="MTLLQIGDTPARIGGMLSGAIEAATLSSSEKELAVKNGFHILAD
                     PSDVEFPGNAVVTTRAFLKTNRDDVKRFVRGLVEVIQFVKTQPERSKKLLHEIYRQSD
                     DSLMAKRYQSMVEMFPDYPYLTKAAVLSFLEILRDEGKLKEPLNAELFLDTSLLAEVE
                     RERKK"
     gene            complement(711..1154)
                     /locus_tag="VLM90_09405"
     CDS             complement(711..1154)
                     /locus_tag="VLM90_09405"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13225.1"
                     /translation="MFRWVFCAATIVGLLLFARENCPAQTKLRASYGSLAVSQVVLPL
                     GVRAGIFQKNGLNLEPIYIGGRSVSALISGDVQFGFMGGPPAILARVGGADVVMLAGL
                     NGLDQILVALPTIKRGADLIGKRVGISRFGTTADYGARIGLKKLK"
     gene            complement(1181..>1819)
                     /locus_tag="VLM90_09410"
     CDS             complement(1181..>1819)
                     /locus_tag="VLM90_09410"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13226.1"
                     /translation="KRAVQNGAAGLSLCPEPINGRQIHDRYFDPLWREAQEMNIPICF
                     HPPARPQQPQVSQDRFEGHPNQALLVNPLRNPIEQILAVSAFCAGGVLEKFPKLKVAF
                     LEGNCAWLPWLLYRIDEYWQMQGKMADVPLRQKPSEYFKQQCYISVDVDEALVKNVID
                     YMGDDNIVISTDYPHIDCLWPHALEEFLSMPISEQSKRKILWDNCAKLYNHH"
BASE COUNT          391 a          512 c          522 g          394 t
ORIGIN      
        1 cgaccggccg gcgatataca gcggttccac cgtcattccg tgccggccaa acatgccggc
       61 ctgcacaccg agcggaaaaa ccacctggct gagacttggc gtgccatagg cggcgcggac
      121 tttaatttgg ctgaagcccg aaaccggcaa cagcaggaca atcaggaata tgattcgaga
      181 gatcatggta ttcatattta tttttttcgt tcgcgctcca cttcggcgag cagactggta
      241 tcgagaaaga gctcggcgtt cagcggctct ttcagcttgc cttcgtcgcg caggatttcc
      301 aggaacgaaa gcaccgcagc tttggtcaaa taggggtaat caggaaacat ctcgaccatg
      361 gattgataac gtttcgccat caggctgtca tcgctttggc ggtagatttc atgcagtaat
      421 tttttgctgc gctccggctg ggttttgacg aactgaatga cttcaaccaa gccgcgcacg
      481 aatcgcttga cgtcgtctcg attggttttt agaaaagccc gggtggtcac cacggcattg
      541 ccggggaact cgacatcgct gggatcggcc aggatatgaa aaccattttt gacggccaac
      601 tccttctcgc tgctgctcaa cgttgccgct tcgatggccc ccgacaacat gccgccgatg
      661 cgcgccgggg tgtcgccgat ctggagcagg gtcacatctt tttgcggctg tcatttcagc
      721 ttcttgaggc cgatacgcgc gccgtaatcc gcggtcgtac cgaagcggct gatgccgacc
      781 cgtttgccga tcagatcagc gccgcgtttg atcgtcggca gcgcgacgag aatttggtcg
      841 agtccgttca acccggcgag catgaccacg tcggcgccgc cgacgcgcgc caagattgcc
      901 ggcgggccgc ccataaagcc gaactgaaca tcgccgctga tcaaggcgga gaccgatcta
      961 ccgccgatat aaatgggctc gagattgagt ccgtttttct gaaagattcc ggcgcgcact
     1021 cccagaggca ggacgacttg cgacaccgcg agggagccat aggacgcccg cagcttggtc
     1081 tgcgccgggc agttttcgcg ggcgaacagc agaagaccga cgattgtggc ggcgcaaaat
     1141 acccaacgga acatggcgag ttcctcggcg agttaattgt ttaatgatga ttataaagct
     1201 tggcgcaatt atcccagagg atttttcgct tcgactgctc ggaaatcggc atcgataaga
     1261 actcctccag cgcgtgcggc cagaggcagt cgatatgcgg atagtcggtg gagatcacga
     1321 tattgtcgtc gcccatataa tcgatgacgt ttttcaccag cgcctcgtcg acgtccaccg
     1381 agatatagca ttgctgtttg aaatattcgc tcggtttctg gcgcagcggc acatcggcca
     1441 tcttgccctg catctgccaa tattcatcga tgcgataaag cagccatggc agccaggcgc
     1501 agttgccttc gaggaaagcg accttcagct tggggaactt ttccaaaacg ccgccggcac
     1561 aaaaggcgct cacggcgaga atttgctcga tcggattgcg caacgggttc accaatagcg
     1621 cttgattggg atggccctcg aagcggtctt gcgacacctg gggctgctgc ggccgggccg
     1681 gcggatgaaa acagatcggg atattcatct cctgcgcttc ccgccaaagg ggatcgaagt
     1741 aacgatcgtg aatttgccgg ccattgatcg gctccggaca gagcgacaag ccggcggcgc
     1801 cgttctgcac cgctcgttt
//
LOCUS       DATIRS010000744         1613 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_350202, whole genome shotgun sequence.
ACCESSION   DATIRS010000744 DATIRS010000000
VERSION     DATIRS010000744.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1613
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_350202"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..469)
                     /locus_tag="VLM90_09415"
     CDS             complement(<1..469)
                     /locus_tag="VLM90_09415"
                     /inference="COORDINATES: protein motif:HMM:NF013279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HSQ13227.1"
                     /translation="MQIDRRLISHFDWTLFLLVLTLVAIGITTIYSANYNLATGHAGA
                     LPMRQLTWLGLGLVAMFVAISFDYHYIDRIAYPFYGLMLLLLILVVIVGHSGGGSQRW
                     INLGFFRLQPSEPAKLAIVLIMAKYFQADEPAEGYYLRNLLVPFAMVAPLIFLT"
     gene            complement(459..>1613)
                     /gene="mrdA"
                     /locus_tag="VLM90_09420"
     CDS             complement(459..>1613)
                     /gene="mrdA"
                     /locus_tag="VLM90_09420"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR03423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HSQ13228.1"
                     /translation="PGYTVHLTLDRQMQQTAFEALKGKEVTIVAIDVNSGAILALAST
                     PAFDPNVFARGIKGNEWNALITDRLRPLSNRATQGQFPPGSTFKVVMFIAGLEEGVVD
                     PNAQISDPGFFHFGNRNFRDWKQGGHGLVNLHHSLVISCDTYYYQLGNKLGVDKIAKW
                     ARAFGLGEKTGIALDDERGGMIPDTAWKMKRYRQPWFPGETLSVAIGQGYVTVTPLQL
                     ANMMAAVANGGKLYRPRLVSKVESLDGSNVREFGPELIRTIEMKPDTLNRVHNALADV
                     VKGGTGGMARSPLIDVAGKTGTAQVVEMKGGYVKSEQLSRFTRDHAWFVSYAPVQSPQ
                     VAIAVLVEHGGHGGEAAAPMAKQVFEKFIELQKQAAEKQHVQAPGANRAD"
BASE COUNT          340 a          470 c          487 g          316 t
ORIGIN      
        1 aggttaaaaa tatcaacggc gccaccatgg caaagggcac caagagattg cgcagataat
       61 aaccctcggc gggctcatcg gcctgaaaat atttcgccat gatcagcacg atggcgagct
      121 tggcgggttc cgacggttgc aagcgaaaga aaccgagatt gatccagcgc tgcgaaccgc
      181 cgccggaatg accgacgatg acgacgagaa tcaacagcag cagcatcaag ccgtagaacg
      241 gataggctat ccggtcgata tagtgatagt caaaactgat cgccacgaac atcgccacca
      301 agccgagacc cagccaagtc agctggcgca tcggcaaagc gccggcgtgg ccggtggcga
      361 gattgtagtt ggcactgtag atggttgtga taccgatggc gaccaaggtc aacaccagca
      421 aaaagagcgt ccagtcgaag tgcgagatca agcgccggtc aatctgcacg gtttgctccc
      481 ggcgcctgca catgctgttt ttcggcggcc tgtttttgca gttcgatgaa cttctcgaag
      541 acctgcttgg ccatcggcgc cgccgcttca ccgccgtgac cgccatgctc gaccagcacg
      601 gcgatggcga cctgcggcga ctgcaccggc gcgtaggaaa caaaccaggc atggtcgcgg
      661 gtgaagcggc tcaactgttc gctcttcaca tagccacctt tcatttcgac cacctgggcg
      721 gtgccggtct tgccggccac gtcgatcagc ggcgaacgcg ccatgccgcc ggtgccgcct
      781 ttgacgacat cggcgagcgc gttgtgcacg cggttcagtg tatccggttt catttcgatt
      841 gtgcgaatca gctcggggcc gaattcacgc acgttggatc catcgaggga ttcgaccttg
      901 ctgaccaagc gcggccgata gagcttgccg ccgttggcca ccgcggccat catgttggcg
      961 agttgcaacg gcgtcaccgt gacataaccc tggccgatgg cgaccgacag ggtttcgccg
     1021 ggaaaccagg gttgccggta gcgtttcatc ttccacgcag tgtcgggaat catgccgccc
     1081 cgctcgtcgt ccaaggcgat gcccgtcttc tcgccaaggc cgaaggcgcg cgcccatttg
     1141 gcgatcttgt cgacgcccag cttgttgccc aactggtaat agtaagtgtc gcaggagatc
     1201 accaaggaat gatgtaaatt taccaagcca tggccgccct gtttccagtc gcgaaaattg
     1261 cggttgccga agtgaaagaa gccgggatcg gaaatctgtg cgttgggatc gacgacgccc
     1321 tcttcgaggc cggcgatgaa catgacgact ttaaatgtcg atcccggtgg aaattgccct
     1381 tgggtggccc ggttgcttaa cggccgcagc cggtcggtaa tcagagcatt ccattcgttg
     1441 cccttgatgc cgcgggcgaa aacgttggga tcgaaggccg gcgtgctggc gagcgccaag
     1501 atcgcccccg agttgacatc gatggcgacg atggtgactt ccttgccttt gagcgcttcg
     1561 aaggcggtct gctgcatctg ccggtccaac gtcaaatgca ccgtgtagcc ggg
//
LOCUS       DATIRS010000745         1522 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1825408, whole genome shotgun sequence.
ACCESSION   DATIRS010000745 DATIRS010000000
VERSION     DATIRS010000745.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1825408"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            90..1088
                     /locus_tag="VLM90_09425"
     CDS             90..1088
                     /locus_tag="VLM90_09425"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13229.1"
                     /translation="MTKTALAILLLISLRADLGAAYGEATKLVVAYASPAATFCPGWI
                     ARREGIFAKYNLDVEMVLMQGASAYMPALANGNIQVLYGGGTAVSRAIATKYFDVMVI
                     ATETRYVPVRLMVNNSIRAPADLKGKRLGAGRAGLDEYATLLYLDKLGLVAGKDVQMV
                     YLAGGIPSRVAAMKQGLIDGVAVNPPNEYELEKAGYRELVNFLDLKMPYAGVPHTVNR
                     VFRDRNRRVLEDYITAHVAGMQLFRTNKQLAFKAIVELTRQKDPVILERTYDTYYKQY
                     EAIDGLPLPWQAGIESMITGFHERFNPQGIKNRDASASLDASFVQKAAERLKLGKK"
     gene            1185..>1522
                     /locus_tag="VLM90_09430"
     CDS             1185..>1522
                     /locus_tag="VLM90_09430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13230.1"
                     /translation="MRQVIKAVVFRVALWLCGATAASVAVILCAIGTVQAASPLTRAV
                     ISYPNANPRVAPLWIAQDLDFFSKYGVKGEVVFVRNNQSLVAGIAAGDIDVGYTGGAT
                     VIGAAAGGLDL"
BASE COUNT          308 a          450 c          460 g          304 t
ORIGIN      
        1 cttccgcacg cttaacttat tgccgatacc agtttccgcg tgacggctgc catgcccatc
       61 gcatcagagt gcggatcgag gtaaagaaga tgaccaaaac agcgctagcc attttgctgt
      121 tgatttcgct ccgggcggat ctcggcgccg cctacggcga ggcaaccaag ctcgtcgtcg
      181 cctatgcttc gccggcggcg actttctgtc ccggttggat cgcccggcgc gaggggatct
      241 tcgccaagta caatctcgac gttgagatgg tcttgatgca aggcgcgtcg gcctacatgc
      301 cggcgttggc caacggcaac atccaggtgc tttacggcgg cggcaccgcg gtgtcgcggg
      361 cgattgcgac caaatatttc gatgtgatgg tgatcgccac cgagacccgc tacgtgccgg
      421 tgcgcttgat ggtcaacaac tccatccgcg cgccggccga tttgaaaggc aagcggctcg
      481 gcgccggccg cgccggtctc gacgagtacg cgacattgct ctatctggac aaactcggcc
      541 tggtcgcggg aaaagacgtg cagatggtct atctcgccgg cggcattccc agccgggtgg
      601 cggcaatgaa gcagggattg atcgacggcg tggcggtcaa tccgcccaac gagtacgagc
      661 tcgaaaaggc cggctaccgc gagctggtca acttccttga tttgaagatg ccctacgccg
      721 gcgtgccgca cacggtgaac cgggtttttc gcgaccgcaa tcgtcgcgtg ctggaagatt
      781 acattaccgc ccacgtcgcc ggcatgcaat tgtttcgcac caataaacaa ttggctttca
      841 aagcgatcgt cgagttaacc cggcaaaaag atccggtgat tctcgagcgc acctacgaca
      901 cgtattataa acagtatgaa gccatcgacg gcctgccgct gccatggcaa gccggtatcg
      961 agagcatgat caccggcttc cacgaacgct tcaatccgca gggcatcaaa aaccgcgatg
     1021 cttcggcttc tctcgatgcg tccttcgtgc agaaagccgc tgagcggcta aaactcggca
     1081 agaaataaac cacagtgggc aggatgtcgt ccccaagccg cgcaaagcac gcaaaataaa
     1141 ccagcgttta ttggcgacgg ctacggcatt tgcaggaggg gtgcatgcgg caggttatca
     1201 aggcggtggt ttttcgcgtc gcgctctggc tctgtggcgc aaccgccgcc tcggtggcgg
     1261 tgattctctg cgctatcggt acggtgcagg cggcctcgcc gctcacgaga gctgtcataa
     1321 gctatcccaa cgccaatcct cgggtcgcgc cgctttggat cgctcaggat ctggatttct
     1381 tcagcaagta cggagtcaag ggcgaggtgg tatttgtccg caacaaccag tcgctcgtcg
     1441 ccgggatagc cgctggcgat atcgatgtcg gatacacggg aggcgccacg gtcatcggcg
     1501 cggcggcagg cggtctggat ct
//
LOCUS       DATIRS010000746         2277 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1333466, whole genome shotgun sequence.
ACCESSION   DATIRS010000746 DATIRS010000000
VERSION     DATIRS010000746.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2277
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1333466"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..696)
                     /locus_tag="VLM90_09435"
     CDS             complement(<1..696)
                     /locus_tag="VLM90_09435"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HSQ13231.1"
                     /translation="MNRTKTALPALAKAPTGIRGLDEITGGGLPRGRTSLIAGTAGAG
                     KTLFGMEFIYRGATQFGEPGVVMAFEESETELTENVASLGFDFDALIKRNQLVVDFVR
                     VERSEIEETGEYDLEGLFIRLAQAIDKVRAKRVLLDTIEALFAALPNEGILRAELRRL
                     FRWLKERGVTAVITAERGSGALTRHGLEEYVSDCVILLDHRVIEQVSTRRLRVVKYRG
                     TTHGTNEYPFLIDT"
     gene            complement(934..2037)
                     /locus_tag="VLM90_09440"
     CDS             complement(934..2037)
                     /locus_tag="VLM90_09440"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HSQ13232.1"
                     /translation="MKTWLWRGALALALLGMFGGLVMLSGIVLIKASSRHWAITAWLL
                     DFSKQRSVSTHTLGLKAPPLDDPRMVVKGGAYFDVGCRPCHGGPELRQPRIPAQMTPH
                     PVYLPPRIADWAAEELFYMIKHGIKFTGMPAWPAPGRDDEVWAIVAFLKRLPHLDAAQ
                     YARVTRGETVDDRMDAPLRALAAKSVAARRAVAENCSRCHGADGMGRDGASPVIAGQR
                     AAYIFASLDAYGRGKRHSGMMEPIAAGLSVQTMSELAHFYAGLAPTWRSASPDSAAIT
                     RGRAIALGGVAQNKVPPCAECHGPGEGRRNPFYPDLAGQHGDYLVLQLQLFKAGKRGG
                     SAYAHLMQHVAPHLSEAQIRDLAAYYSALNNKN"
     gene            complement(2034..>2277)
                     /locus_tag="VLM90_09445"
     CDS             complement(2034..>2277)
                     /locus_tag="VLM90_09445"
                     /inference="COORDINATES: protein motif:HMM:NF021214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HSQ13233.1"
                     /translation="LLTSMHMTLLGVLLALAPRPLFAHDTADATHALYSLAALADQQL
                     GGAIMLLVGGVAYLAGGLWLTAGLLRSVDYRQRART"
BASE COUNT          462 a          697 c          686 g          432 t
ORIGIN      
        1 ggtatcgatc aaaaaaggat attcgttggt gccatgagtc gtgccccggt acttgactac
       61 acgcagacgc cgggtcgaca cctgttcgat cacccgatgg tcgagcagga tgacgcagtc
      121 cgatacatac tcttccaagc cgtggcgggt tagcgcgccg ctgccgcgtt cggcggtgat
      181 tacggcggtg acgccgcgct ctttgagcca gcgaaacagc cggcgcagct cggcgcgcaa
      241 gataccttca ttgggcaatg ctgcgaacag cgcttcgatg gtgtcgagca ggacgcgctt
      301 ggctcttact ttgtcgatgg cctgggccag acggataaac aatccttcga ggtcgtattc
      361 gccggtctct tcgatctcgc tgcgctcgac ccggacaaaa tcgactacga gctggttgcg
      421 tttgatcaat gcgtcgaaat caaagccgag actggcgacg ttctcggtca actcggtttc
      481 actctcctcg aaggccatga ccacgccggg ctcgccgaac tgggtcgcgc cgcgataaat
      541 aaactccatg ccgaaaagag ttttgccggc gccggcggtg ccggcgatga gcgaggttcg
      601 gccgcgcggc aagccgccgc cggtgatttc atccaaaccg cggatgccgg tgggcgcctt
      661 ggccagcgcc ggcaaagctg ttttagttcg gttcattcgc tttccaaaac cgtgaaagct
      721 tctctgacgg gttgcatcgc cgagccctca ctcgaacgtt aactagcgcg tggagaatcc
      781 tattactatc aaaacaaatc ccgtccgcaa gacaaaactt gcagctattt aataataagg
      841 cgccaaccgg attctgtccc aatatcggga tagctaggac actcactaca tttcagtcga
      901 catctcgcat acggtttgtt taattattga tccctaattt ttgttattca acgcgctata
      961 gtacgccgcc aagtcgcgga tttgcgcttc gctcaagtgc ggcgcgacat gttgcatcag
     1021 gtgcgcgtag gcgctaccgc cccgtttgcc ggctttgaag agctgcaatt gaagtaccaa
     1081 ataatcgcca tgctgtccgg caagatcggg atagaatgga ttgcggcggc cctcgcccgg
     1141 accatgacac tccgcacaag gggggacttt gttttgcgcc acgccgccca gggcgattgc
     1201 gcgcccgcgc gtgatggcgg cgctgtcggg actggcggat cgccaagtgg gcgccagccc
     1261 ggcgtaaaaa tgcgcaagtt cgctcatcgt ttgcacgctc aagccggcgg cgatcggttc
     1321 catcatgccg ctgtggcgct tgccgcggcc ataggcgtca agagacgcga aaatatacgc
     1381 tgcccgttga ccggcgataa ccggcgatgc gccgtccctg cccatcccgt cggcgccgtg
     1441 acagcgcgaa cagttttcgg ccaccgcgcg gcgcgccgca accgacttgg ctgccagcgc
     1501 gcgcagcggc gcgtccatgc ggtcgtccac ggtttcaccc cgggtcacgc gcgcgtactg
     1561 tgcggcgtca aggtgcggca ggcgcttgag gaacgcgact atcgcccaga cctcatcgtc
     1621 gcgaccgggc gcgggccagg cgggcatgcc ggtgaacttg atgccgtgtt tgatcatgta
     1681 aaaaagctcc tcggctgccc aatcggcgat acgcggcggc agatagaccg gatggggcgt
     1741 catttgcgcc gggattcttg gctggcgcag ctccggcccg ccgtggcaag gacggcagcc
     1801 gacatcaaag tatgcaccgc ccttgaccac catgcgcgga tcgtcaagcg gcggcgcttt
     1861 caggccaaga gtatgcgtgc taaccgaccg ctgtttggaa aaatccagca gccaggcggt
     1921 aatcgcccag tggcgcgagc tggctttgat caggacgatc ccggagagca tgacgagacc
     1981 tccgaacatg ccgagcagcg caagcgcgag cgcgccacgc cacagccagg ttttcatgtc
     2041 cttgccctct gccgataatc cacactgcgc aataatccag cagtcagcca caggcccccg
     2101 gcgagatagg caacgccacc aaccagcagc atgatcgcgc cgcctagctg ctgatcagcg
     2161 agcgcagcta gagaatatag agcatgggtc gcatcagccg tgtcatgggc gaatagcggc
     2221 cgcggcgcca gggccaagag cacgccaagc agggtcatgt gcatggaagt cagcagg
//
LOCUS       DATIRS010000747         2007 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1432147, whole genome shotgun sequence.
ACCESSION   DATIRS010000747 DATIRS010000000
VERSION     DATIRS010000747.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2007
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1432147"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..991
                     /locus_tag="VLM90_09450"
     CDS             <1..991
                     /locus_tag="VLM90_09450"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13234.1"
                     /translation="IFLVMPAVAQPALAQEKRLEPLIVSYSSVTGNRAPFWIAKDLGL
                     YEKYGLDVTLVNIAAGNVSLTALLSGDVHLTTDSSSGVVAAAGRGAPIVTVATNGALP
                     YQFVALASIKSPDDLKGKIVGSSRIGAGTDFLLRRILAKIGLTPGKDVSLIPTGVSES
                     DKRLQLIFQGKIDATIGESDKVFQVTESGAQKLTILGEPKDFGVAAPGSEINTTRQVI
                     KELRPRLKAFFMAYSEAIALGRKNRELAYQVFRKYMRLPNNPKLLEFTYRAQLLDAIP
                     AKPWPREDSVQASIEDLRGTVAKLESMKVGDFVDASLIRELDQEGFFARLEKP"
     gene            988..1947
                     /locus_tag="VLM90_09455"
     CDS             988..1947
                     /locus_tag="VLM90_09455"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13235.1"
                     /translation="MKRQLVFALISLCCLCGYRDGAAQDKIRIGISAISLGFLPTIIA
                     EKKAFYAKHGIQAEHVLVPCAIATNALLSDDLDFAVCTGPGIAGAIKGLPIKLVMTTQ
                     DKLGYLLLVKANVQKLTDLRGKTIGISTFGSQLYLTSITLLRRYGLEPGKDINLIPGG
                     DNTARIAAMDGGKVDAAFVSSPADIFGAKRGYKVLLWSRDHVPLLQNAMVTTDKQLKT
                     APDKVKRTIKASIEALRFIREQPEETINIAAKWLKLDLAITRAAFENYLPCYSADGAL
                     PDQALQDLIQYELDRGNLKKESPLTQVASRALLQQAQKELNLR"
BASE COUNT          443 a          643 c          543 g          378 t
ORIGIN      
        1 aatcttcttg gtcatgccgg cggtcgccca acctgcctta gcgcaggaaa aacggcttga
       61 gccgctgatc gtttcctaca gctcagtgac tggtaatcgc gcgccgtttt ggatcgccaa
      121 ggatctcggt ctatacgaga aatacggctt ggatgtaacg ctggtcaaca tcgccgccgg
      181 caacgtttcg ctcaccgcct tgctctccgg cgacgtgcat ctgaccaccg actcaagttc
      241 cggcgtggtc gccgccgccg gccgcggcgc gcccatcgtc acggtggcaa ccaacggcgc
      301 cctgccctat caattcgtcg cgctcgcttc gatcaaatcg cccgacgacc tcaaaggcaa
      361 gattgtcggc agcagccgca tcggcgccgg caccgatttt ttgctgcgcc ggattctcgc
      421 caagattggt ttgacgccgg gcaaagacgt gagcctgatt ccaaccggag tcagcgaatc
      481 ggataaacga cttcagctga ttttccaagg caagatcgac gccaccattg gcgagtcgga
      541 caaagtcttt caagtcacgg aaagcggcgc gcaaaaactc acgatcctag gcgagcccaa
      601 agactttggc gtggccgcgc cgggcagcga aatcaacacc acccgccagg tgatcaaaga
      661 gttgcggccg cgcttgaagg cgttcttcat ggcctatagc gaagcgatcg cgctgggccg
      721 caagaaccgc gagctggctt atcaagtatt ccgcaagtac atgcggctgc cgaataatcc
      781 caagcttttg gagttcacct atcgcgccca actgctcgac gcgatcccgg ccaagccctg
      841 gccgcgggaa gattccgtgc aagcgagcat cgaagatttg cgcggcaccg tcgccaagct
      901 cgagagcatg aaagtcggcg atttcgtcga cgcgtcattg attcgggagc tcgaccaaga
      961 gggatttttc gcgcgcttgg agaagccatg aaacggcaat tggttttcgc gctgatttcg
     1021 ctgtgctgct tgtgcggtta ccgcgacggc gccgcccagg ataaaatccg catcggcatt
     1081 tccgccatct cgctgggttt tttgccaacc atcatcgctg aaaaaaaagc cttctatgcc
     1141 aagcacggca tccaagccga gcatgtgctg gtgccctgtg ccatcgccac caatgcgctg
     1201 ctctccgacg atctcgactt cgcggtctgc accggcccgg gcatcgccgg cgccatcaaa
     1261 ggactgccga tcaaattggt gatgaccacc caggacaagc tcggctatct gctcctggtc
     1321 aaagccaacg tgcaaaagct caccgacctg cgcggcaaaa ccatcggcat cagcactttc
     1381 ggcagccagc tctacttgac ctcgataact ctgctgcgcc gttacggcct ggaacccggt
     1441 aaagatatca atctcatccc cggcggcgac aacaccgccc gcatcgccgc catggatggc
     1501 ggcaaggtgg acgccgcctt cgtctcctcg cctgccgata tcttcggcgc caaacgcggc
     1561 tacaaggtgc tgctctggag ccgcgatcac gtaccgctgt tgcaaaacgc catggtgacc
     1621 accgacaagc agctcaaaac ggcgccggac aaagtaaagc gcacgatcaa agccagcatc
     1681 gaagcgctgc gcttcattcg cgagcagccc gaggaaacca tcaacatcgc cgccaagtgg
     1741 ttgaagctcg atctcgccat cacgcgcgcg gcctttgaaa attatctgcc atgctacagc
     1801 gccgacggcg ctctgcccga tcaggcactg caggatttga ttcaatacga attggatcgc
     1861 ggtaatctca aaaaagaaag tcccttgacc caggtggcga gccgcgcgct gttgcagcaa
     1921 gcacaaaagg aactcaacct tcggtaaact caatgaccga tcgcagctca tcgaacgacg
     1981 ccgcgccgct cgccggcgtg cgcgtcc
//
LOCUS       DATIRS010000748         2065 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1727667, whole genome shotgun sequence.
ACCESSION   DATIRS010000748 DATIRS010000000
VERSION     DATIRS010000748.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2065
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1727667"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1036
                     /locus_tag="VLM90_09460"
     CDS             <1..1036
                     /locus_tag="VLM90_09460"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13236.1"
                     /translation="NEIIELANVTDEYNGCFQFNGFQMVLQPESGVPEMLTKIHGLQI
                     GNEFRVRPGAKAAGMQSIKYMEEAQKRGQELYGVVIPYQHIRRFNLDDCFLFNGLPTW
                     EAIKNSSDLKTKLRDKDIRRKIEQERVACEGKLEFPEWHGWDRVVFEHLEKPELKKLE
                     LKNVEEISRLTEKAPVDAFFDTWLEDDLNSAICYHGLANAHPELLAEMIKSDTSLIGT
                     DVGAHLDRFFWHGAPTKVLGYWRRDKKLFSLEQAVHKLTGFPAKRLRLNRGVLKEGMP
                     ADVTVFDADKIDDLVSKKLPDMVDAQEVKRHPPGMKAVLVNGATVVEDGQIHEVFPGK
                     VRRQQLCTAN"
     gene            1151..>2065
                     /locus_tag="VLM90_09465"
     CDS             1151..>2065
                     /locus_tag="VLM90_09465"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13237.1"
                     /translation="MKVCAIDVHHHYVPTSLLEEAKKNGKHLGVELVEKDGHKSLSFA
                     GGPPFVLHPELPAIDEQLKMMADSELAMAALEAHTATLGYRLTGEQGENWCNVYNDGI
                     ADLVKRYPDRFVGMASVPLQDAKRAAKVLERAVRDLNFRGGYIGTNVNGNYYGTEEFD
                     PFWAKAQELDVMVVMHPEDVAGADKMNPYGLKLICGNPADSALCFGFMTYSGVFDRFP
                     NLKLCILHGGGFFPYHLGRFDQGWEVRAGARAAKAKMAPSSYLKNIYYDNMIYRLDTL
                     KYLIGLGGIDHIMVGTDYPYDLGDWDSAK"
BASE COUNT          482 a          618 c          582 g          383 t
ORIGIN      
        1 caacgagatc atcgagctgg ccaacgtcac tgacgaatac aacggctgtt tccagttcaa
       61 cggttttcaa atggttctcc agccggagtc cggcgtgccg gaaatgctca cgaaaatcca
      121 cgggctacag atcggcaacg agtttcgcgt gcgtcccggc gcgaaagcgg ccggcatgca
      181 gtcgatcaag tacatggaag aagcgcagaa gcggggccag gaactctacg gcgtggtcat
      241 cccctaccag catattcgcc gctttaactt ggacgactgc tttctgttta atggcctgcc
      301 gacctgggaa gcgatcaaga actcgtccga tctgaaaacg aagctccgtg acaaggatat
      361 tcgccggaag atcgagcaag agcgcgtcgc ctgcgaaggc aagctcgagt tccccgaatg
      421 gcatggttgg gaccgcgtcg tattcgagca tctcgaaaag cccgagctga aaaaattgga
      481 actaaaaaac gtcgaagaga tctcccggct caccgagaaa gctccagtgg atgctttctt
      541 tgacacctgg ctcgaagacg atctcaactc ggcgatttgc taccacggcc tggcgaacgc
      601 ccatcccgag ctgctcgccg agatgatcaa atccgacacg agcctcatcg gcaccgacgt
      661 gggcgcccat ctggaccgct ttttctggca cggcgcgcca accaaggtgc tcggttactg
      721 gcgccgcgac aagaagctct tcagcctcga acaggcggtg cataaactga ccggcttccc
      781 ggcaaaaaga ctgcgcctga accgcggcgt gctaaaggaa ggcatgccgg cggacgtgac
      841 ggtgttcgac gccgacaaga tcgacgatct ggtcagtaag aaacttcccg acatggtcga
      901 tgcgcaagaa gtaaaacgcc acccgccggg catgaaagcc gttctcgtca acggcgccac
      961 ggtggtggaa gacggccaga tccacgaggt cttccccggc aaggtgcgcc gccagcagtt
     1021 gtgcactgcc aactaacgtc ccgcaatcaa atcatcatcg tcatcgcgtt ctcacccttc
     1081 cctctcccgc cgggagaggg aagggtgagc gcaggcccga tgtaaactca atctcgaaag
     1141 aaggatcaag atgaaagtct gcgctatcga cgtgcatcac cattacgtgc ccacgagtct
     1201 tttggaggaa gccaagaaaa acggcaaaca tctcggcgtc gagctcgtcg aaaaggatgg
     1261 ccataaatcg ctctccttcg ccggcggtcc gccgtttgtc ctacaccccg agctgccggc
     1321 gatcgacgag caattgaaaa tgatggccga ttccgagctc gccatggccg cgctcgaagc
     1381 gcacacggcg accctcggct atcgtctcac cggcgagcaa ggcgagaact ggtgcaacgt
     1441 gtacaacgac ggcatcgccg atctggtcaa gcgctatccc gaccgcttcg tcggcatggc
     1501 gtcggtgccg ctgcaggatg ccaagcgcgc ggcaaaagtg ttggagcgcg ccgtgcgcga
     1561 tctgaatttc cgcggcggct acatcggcac taacgtcaac ggcaattatt atggcacgga
     1621 ggaattcgat ccgttctggg ccaaggcgca agagctcgac gtgatggtcg tcatgcatcc
     1681 cgaagacgtg gccggcgccg acaagatgaa tccctacggc ctgaagctca tctgcggcaa
     1741 tccggccgac agcgcgctct gcttcggctt catgacttac agcggcgtat tcgatcgctt
     1801 tccaaatttg aagctctgca ttctgcacgg cggcggattc ttcccctatc atctcggccg
     1861 tttcgaccag ggttgggaag tccgcgccgg cgcccgagcc gcaaaagcga aaatggcgcc
     1921 aagctcgtat ttaaaaaaca tttactacga caatatgatc taccgcctcg acacgctcaa
     1981 atatttgatc ggcctgggcg gcatcgacca catcatggtg ggaaccgact acccctacga
     2041 cttgggtgat tgggactcgg cgaag
//
LOCUS       DATIRS010000749         2472 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_350381, whole genome shotgun sequence.
ACCESSION   DATIRS010000749 DATIRS010000000
VERSION     DATIRS010000749.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2472
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_350381"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1532)
                     /gene="recN"
                     /locus_tag="VLM90_09470"
     CDS             complement(<1..1532)
                     /gene="recN"
                     /locus_tag="VLM90_09470"
                     /inference="COORDINATES: protein motif:HMM:TIGR00634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HSQ13238.1"
                     /translation="MLRELRIKNFAVIDEVELELDPGLNIITGETGAGKSIILNALGL
                     VSGERGGSDIIRHKADDATVEALFETLPPAIDAKLSDAGFDTGGDLVIKRILNRSGKN
                     RIYLNGSLASLTVLADVGGALVHIYGQHEHHTLLRPETHLNLLDAFADLAGLTKAMRE
                     KFEAMTVAWNRLTETRDGLERRRRERALLEAQAEEIGRARLKAGEEEELRSAKNILAH
                     AEKLHQGCREGEELLYEGDAALVAGLGKYAVRLRELAVIDENLRPALELIDSSLAQLQ
                     EAAAQLRRYADRVHFDPHALEQLEDRLDELQRLKRKYNAGVDEILLMEDEIKKSLESL
                     EQGEEQIAGLEKTFAQARQAAWDQAEKLSVERQRAAKKLKREMEKEVKSLGMAETVVE
                     VHFLNQQEKVDQPPFLIGGKKLTERGMDEVEFYFSPNPGEPVKALAKIASGGELSRLM
                     LALKSLVLTPGVVSTLLFDEVDSGVGGRVAEIVGNKLKQVAAHHQVISVTHLPQIAAM
                     AD"
     gene            complement(1545..2396)
                     /locus_tag="VLM90_09475"
     CDS             complement(1545..2396)
                     /locus_tag="VLM90_09475"
                     /inference="COORDINATES: protein motif:HMM:NF039482.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+)/NADH kinase"
                     /protein_id="HSQ13239.1"
                     /translation="MIRTVGLVAKYQEPKAAHMVRWLIPWLKKRGKKVCVENGLARAG
                     AQSCSKKEMAAKADLIISLGGDGTLLNIAPLVERPEVPILGVNMGGLGFITEVAVDEL
                     EAILTKTLDGDYQVERRMTLEIRVIGKKRRTRKFRVLNDAVITKGARSRIIDLETYVG
                     DDYLCTYRADGLIISTPTGSTAYSLAAAGPILEPTLGAIVLAPICPHTLTNRPIVVPS
                     NAAIRVTLRSFGDTVILIPDGQPGLRLNNGDQVEARDYGMPVSLIKIPSRSYYEILRE
                     KLKWGER"
BASE COUNT          465 a          756 c          696 g          555 t
ORIGIN      
        1 cagtccgcca tagcggcgat ctgcggtaga tgggtcacac tgatcacttg gtggtgcgcc
       61 gcgacttgct tcagtttatt accgacgatt tccgcgaccc gcccgccgac gccggaatcg
      121 acctcgtcga agagcaacgt cgacaccacc ccgggcgtca aaaccaagga tttgagcgcc
      181 agcatcaatc ttgaaagctc accgccggaa gcgattttcg cgagtgcttt gaccggctcg
      241 ccggggtttg gcgaaaagta aaactcgact tcatccatgc cgcgttcggt aagttttttc
      301 ccgcctatga gaaacggcgg ctgatccacc ttctcttgct gattaagaaa atgtacttcg
      361 acaacagtct ccgccattcc caggcttttg acttcttttt ccatctcgcg cttcaatttt
      421 ttcgcggcgc gctggcgttc aacggacagt ttctccgcct ggtcccacgc cgcctgccgg
      481 gcctgggcaa aggtcttttc caggccggcg atttgttctt cgccttgctc caggctttcc
      541 agcgacttct tgatctcgtc ttccatcagt agaatctcat cgacgccggc gttgtacttg
      601 cgtttgagac gttgaagctc atccaaacgg tcttctagtt gctccagggc gtgtggatcg
      661 aagtggacgc gatcggcata acggcgcaat tgggcggcgg cctcttgcaa ctgcgccagc
      721 gacgaatcga tcagctccag ggcaggccgc aggttttcgt ctatcaccgc caactcacgc
      781 agcctgaccg cgtattttcc caaaccggcg accagcgcgg catcgccttc gtacaatagc
      841 tcctcgccct cgcggcagcc ttgatgcaac ttctcggcat gagccaaaat attcttggcg
      901 gagcgcagtt cctcttcttc gcccgcttta agccgagcgc ggccgatctc ttcggcttgc
      961 gcttcgagca gcgccctttc gcgacggcgc cgttcgagcc catcgcgcgt ctcagtgagc
     1021 cggttccagg ccacggtcat tgcttcgaac ttttctctca ttgctttcgt cagccctgcc
     1081 aaatcagcga aggcgtcgag caaattcaaa tgggtttccg gtcgcagcag cgtgtggtgt
     1141 tcatgctgcc cgtagatatg caccaaggcg ccgcccacat cagccaacac cgtgagcgag
     1201 gcaaggctgc cgttcaggta gatccggttc ttgcccgagc gattgagaat ccttttgatc
     1261 accaggtcgc ccccggtatc gaatccggcg tcactgagct tggcgtcgat cgccggcggc
     1321 agagtctcga acagcgcttc caccgtcgcg tcgtctgctt tatgacggat gatgtccgag
     1381 ccaccgcgtt cgccggagac gaggccgagg gcgttgagaa tgatcgattt gccggcgccg
     1441 gtttcgccgg tgatgatatt caggccggga tccaactcca actcgacttc atcgattacc
     1501 gcgaaattct tgatgcgaag ctcgcgcagc atcgggcgaa tcctttagcg ctctccccat
     1561 ttcaattttt cgcgcaggat ctcgtagtaa ctgcgcgagg gaatcttaat caaggatacc
     1621 ggcatgccgt aatcgcgcgc ttccacctga tcgccgttgt tgagccgtaa gcccggctgc
     1681 ccgtcgggaa tcaaaatgac ggtgtcgccg aaggaacgca gtgtaacgcg aatcgccgcg
     1741 ttgctcggca ccacgatggg ccggttggtg agcgtatgcg ggcagatggg cgcgagcacg
     1801 atggcgccga gcgtcggctc gaggatcggc cctgccgccg ccagagagta ggcggtggag
     1861 cccgtcggcg tcgagatgat caaaccgtcg gcgcgatagg tgcaaagata atcgtcaccg
     1921 acgtaggttt ccaaatcgat gatccggctg cgcgccccct tggtgatcac ggcgtcgttg
     1981 agtacgcgga acttgcgcgt gcggcgcttt ttcccgatga cgcggatttc cagcgtcatc
     2041 cgcctctcga cttggtagtc gccgtcgagg gtcttggtta atatggcttc gagctcgtcc
     2101 accgcgactt cggtgataaa acccagaccg cccatgttca cgccgagaat aggcacctcc
     2161 ggccgctcca ccaaaggcgc gatgttgagc aatgtgccgt ccccgccgag tgaaataatc
     2221 agatcagcct tggccgccat ctcttttttg ctgcacgatt gcgcaccggc gcgcgccaag
     2281 ccgttttcga cacagacttt tttgccgcgc ttcttgagcc acgggatcag ccagcggacc
     2341 atgtgggccg ctttgggttc ctggtatttg gcgacgaggc caacggtacg aatcatcgat
     2401 gaagtcactc cccggcgaga ttatcacatg gcagaaaaaa atgtccatga cggcgtggac
     2461 atgcgggatc ga
//
LOCUS       DATIRS010000750         2027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1333664, whole genome shotgun sequence.
ACCESSION   DATIRS010000750 DATIRS010000000
VERSION     DATIRS010000750.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2027
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1333664"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(232..1893)
                     /locus_tag="VLM90_09480"
     CDS             complement(232..1893)
                     /locus_tag="VLM90_09480"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HSQ13240.1"
                     /translation="MNVRRTRLVTGLILLAYLSTHLLNHALGLISLAAMEWGRWWFLL
                     LWRNPVGTAMLYSALLTHLGLAIWALYQRRHWRMPVAEMLQLLFGLTIPLLLTMHIVG
                     TRLNHEFFGVDDSYTLMVLTLWHAAPMDGLKQAILIVIAWTHGCIGCHYWLRLKKWYP
                     RIAPYLLALALLIPVCGLLGFVGAGREVSNLIARQPEWLEGFLVAAKVPPRSQRAVLY
                     QIYDGVLITFGAAIVLALLARVARNLVERRSRIRITYPNGRQVQAPRNFSVLEASRLA
                     AIPHASVCGGRGRCSTCRVRVTLGAANLPPPAAGELKVLRRVGAAPDVRLACQLRPTN
                     NLTVTPLLPPHAQASEGYGQPAYLAGQERMIAVMFADIRSFTGIAETKLPYDLVFFLN
                     SYFAAVGAAIVSSGGMIDKFVGDGVMALFGVESGPEEGCRQALAAAQAMIERVDDLSG
                     ALAEELSAPLRIGIGIHCGPAVVGRMGYGDTIHVTAIGDTVNVASRLQDATKEFHCQL
                     VISAEIAKQSGLNTASLPRHELTVRNRREALAVYAVEEVAALGGN"
BASE COUNT          445 a          650 c          561 g          371 t
ORIGIN      
        1 gcccaattag cctcataccc gctttcgcgg gtttgacgga acccgggtgg ctcttcgtta
       61 tgcatatcat cccctgacaa atatttttga aggaggacat gaaggcgtcg gataactaat
      121 attccgaact tcgtgatctt cgtgcccttc gtggtgaaca ctttatttct tatttggttg
      181 cggcttcgcc acactgggct cgtcgtggcg cacaacacaa tctgtttctg actaattccc
      241 gccaagcgcc gcgacttctt cgacggcata aaccgccagc gcctcgcgcc ggttgcgcac
      301 ggtgagttcg tggcgcggca ggctggccgt gttcaacccc gactgcttgg cgatttctgc
      361 cgagatcacc aactgacagt gaaactcctt ggtcgcatct tgcagccggc tggcgacgtt
      421 gaccgtgtca ccgatagcgg tgacgtggat cgtgtcgccg tagcccatgc gccctaccac
      481 cgccggcccg cagtgaatgc cgatgccgat gcgcagtggc gcgctgagtt cttctgcgag
      541 tgctccgctg agatcgtcga cccgctcaat catcgcctgg gctgcggcga gcgcttggcg
      601 gcagccttct tcgggtccgc tttcgacgcc gaacagcgcc atcacgccgt caccgacgaa
      661 tttgtcgatc atgccgccgc tcgaaacgat tgccgcgccg acggcggcga aatagctgtt
      721 caagaaaaat actaaatcgt agggcagctt ggtttcggcg atgccggtga acgagcggat
      781 atcggcgaac atcaccgcga tcatgcgttc ctggccggcg aggtaagccg gttggccata
      841 accttcgctc gcctgagcat ggggcggcag aagcggcgtc accgttagat tattcgtcgg
      901 ccgcagctgg caggccagtc taacatcggg cgcggcaccg acacgccgca agaccttcaa
      961 ctcgccggca gccggcggcg gcaaattcgc tgcgccaaga gtgacccgca ctcggcaggt
     1021 tgagcagcgc cctcgaccgc cgcaaaccga agcatgggga atcgccgcta aacggctcgc
     1081 ttcgaggacg gagaaattgc gcggcgcctg cacctgccgg ccattgggat acgtaatacg
     1141 gatgcggctg cgccgctcaa ccaaatttcg cgcaacccgc gctaggagcg ccaagacgat
     1201 cgccgcaccg aaagtgatca gcacgccgtc atagatctgg tacaacaccg ctcgctggct
     1261 gcgcggcggc actttcgcag ccacgaggaa accctcgagc cattccggct ggcgcgcaat
     1321 caggttggac acttcccgac cggcaccgac gaaacccaaa agcccgcaca ctgggataag
     1381 caacgccagg gcgagcaggt atggcgcgat gcgcggatac catttcttca atcgcagcca
     1441 atagtggcag ccgatacagc catgggtcca ggcgatgaca atcaggatcg cctgcttcaa
     1501 tccatccatc ggcgcagcat gccagagggt caaaaccatc aaagtgtagg aatcgtcgac
     1561 gccaaaaaat tcatggttga gccgggtgcc gacgatatgc atcgtcagca acagcggtat
     1621 ggtcaaaccg aataacagtt gcagcatctc ggccaccggc atgcgccaat ggcgccgctg
     1681 gtacagcgcc cagatcgcca aacccaagtg ggtcaataac gcgctgtata gcatcgccgt
     1741 accgaccgga ttgcgccaca gcagcaaaaa ccaccagcgc ccccactcca tcgccgccag
     1801 cgaaatcaat ccgagcgcat gattgagcaa gtgcgtcgac aaataggcga gcagaattag
     1861 ccccgtaacc aaacgtgtgc gccgaacgtt catgattgcg cgccaatcta ctacgagcgc
     1921 gccaccgccg tctatgcaac aacgctgcaa agccgaacaa ggttatgatc cgaatttccg
     1981 acgcctcacc ccctacccct aacgccgaac ttcccatagc cttcctc
//
LOCUS       DATIRS010000751         1558 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1137999, whole genome shotgun sequence.
ACCESSION   DATIRS010000751 DATIRS010000000
VERSION     DATIRS010000751.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1558
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1137999"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(80..1477)
                     /locus_tag="VLM90_09485"
     CDS             complement(80..1477)
                     /locus_tag="VLM90_09485"
                     /inference="COORDINATES: protein motif:HMM:NF013086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HSQ13241.1"
                     /translation="MNTIHSDILVVGAGLAGFTAAVRASEQGAQVVLIDKSAGELGDG
                     NVLMASGSLRAGGKSPRTDPAELYDFVMAEGVGYPNLVKSWSETCDRAVDWLISSGVK
                     VSESVPGRIWLDQSGEVSLAPVYKKDVGTRALTKLKERFTQLGGRYLNRIEGVSLILE
                     NSRVCGVRGRRADEDIELRARATILSTGGFSANKELLKQHIGPHADQCKLRGSKQDTG
                     DGLRMALAAGAKAVNLKYFYGHLISRKALIDDRFWPYPRLDSFVDEGFLIDRNGERFI
                     DEGRGDVAVANELARSDDVTGAVLIFDQDSWSAAKDDTFSNSVKTPAPNPWIKDNDGE
                     IFSDSTIEGLANALGVDGGRLAATLQSYNRAVESNTAPSLAVPRTGKPKPLRAPFYGL
                     RVVSGITFTMGGILVNGRAQALNQAEQPIAGLYAAGDAIGGLMGGYRGGYTGGLMQAV
                     VTGILAGENAAQGQV"
BASE COUNT          297 a          483 c          453 g          325 t
ORIGIN      
        1 ctctcccgcc aggggagaga gtaccggtct caacacttcg ttcgagaaac aaaaccatcg
       61 tcgcactaga gttaactttt taaacctgcc cttgtgccgc gttttctccc gcgagaatgc
      121 ccgttaccac cgcttgcatc aggccgccgg tgtagccgcc gcggtagccg cccatgaggc
      181 cgccgatggc gtcgcccgcg gcgtagagtc cggcgatcgg ttgctccgct tgattcaacg
      241 cttgagcacg gccgttgact aaaatcccgc ccatggtgaa agtaattccg gacacgactc
      301 tcaaaccgta gaatggcgcg cgcagcggct tcggcttgcc cgtgcgcggc acggctagcg
      361 atggtgcggt gttcgattcg acggcgcgat tgtatgactg aagcgtcgca gccaaacgac
      421 cgccatcgac gccgagcgcg ttcgccagcc cttcgatcgt agaatcgctg aagatctccc
      481 cgtcgttatc cttgatccag ggattgggcg ccggcgtctt gacggaattc gaaaacgtat
      541 cgtccttcgc cgcgctccaa ctatcttggt cgaagatcag gactgccccc gtgacgtcgt
      601 ccgaccgagc caactcgttg gcgacggcga catcgccgcg gccctcatcg ataaagcgct
      661 cgccgttgcg gtcgatcagg aatccttcgt caacgaagga atcgagcctc gggtatggcc
      721 aaaagcggtc gtcgatgagt gccttgcgcg agatcagatg gccgtagaaa tatttcagat
      781 tgacggcctt ggcgccggcc gcgagggcca tgcgcagccc gtcgcccgtg tcttgtttcg
      841 aaccgcgcag cttgcactgg tcggcgtgcg gtccgatgtg ctgcttgagc agttccttgt
      901 tggcgctgaa accgccggtg gagagaatgg tcgcgcgcgc gcgtaattcg atatcctcat
      961 ccgcccgcct gccgcgcaca ccgcaaacac ggctgttttc cagaatgagc gagacgcctt
     1021 cgatgcggtt caggtagcgc ccgccgagtt gggtaaatcg ctctttaagc ttagtaagcg
     1081 cacgggtgcc gacatctttc ttgtaaaccg gcgcgagcga cacttcgcct gactgatcta
     1141 gccaaattct tccgggcacg ctttcgctga ctttgacgcc gctgctgatt agccagtcca
     1201 cggcgcgatc acaggtttcg gaccacgatt tgaccaagtt aggatagcca acgccctcgg
     1261 ccatgacgaa gtcataaagc tcagccggat ctgtgcgcgg acttttgccg ccggcacgca
     1321 aactgcccga cgccatcaat acattgccgt cgcccagttc gccggcgctc ttgtcgatca
     1381 acacgacttg ggcgccttgc tcgctggcgc gcacggccgc ggtaaagccg gcgaggccgg
     1441 cgccgacgac gagaatatcg gaatgtatcg tgttcatagt cattgtacgg gcaaccccat
     1501 gtggttgccc gttcgattga gggcagacac atcggtctgc cgctaaggga ttttataa
//
LOCUS       DATIRS010000752         2111 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_842750, whole genome shotgun sequence.
ACCESSION   DATIRS010000752 DATIRS010000000
VERSION     DATIRS010000752.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2111
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_842750"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2111)
                     /locus_tag="VLM90_09490"
     CDS             complement(<1..>2111)
                     /locus_tag="VLM90_09490"
                     /inference="COORDINATES: protein motif:HMM:NF012531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase central domain-containing
                     protein"
                     /protein_id="HSQ13242.1"
                     /translation="NIKGEKSHEIVEQALTVLENLDHRGACGCEENSGDGAGILIQVP
                     HVFLKEACAGLGFQLPEPSDYGVGMIFLPDHREQRVRFEKIIEGIVKEEGQQCLGWRK
                     VPTDNLYLGDGAKATEPFVRQVFIGRSADLADDLAFERKLFVIRRRAENAIRYAGLPG
                     GEFFYVPSLSSRTLIYKGMLTSRQVSTFYPDLSDPQFESAIALVHSRFSTNTFPSWGR
                     AHPYRYLIHNGEINTLRGNENWMHARQGMLASEMFGDDLTKVFPIIQEDGSDSTKFDN
                     CLEFLALSGRSLPHAMMMMIPEPWENHESMDAKKRAFYDYHSCLMEPWDGPASIAFTD
                     GTVVGAVLDRNGLRPSRYYVTKDDLVIMASEVGVLEVPPERVLEKRRLQPGRMFLVDT
                     SEGRIISDEEIKQQMASAEPYGQWLTDNLVRFNDLPEVKDHEPPIDHQATLQRLQAFG
                     YNFEDLRVNIGPMAQNSIQPVGSMGTDTPLAVLSDKPQLLYNYFKELFAQVTNPPIDP
                     IREELITSTTLTIGSEGNLVNPGPQSCRQLRLPEPILKNADLEKLRQISLPGIKSVTL
                     PILFNPREGQAGLERALEELFKAADAAIVGGATIVILSDKGVDRAHAPIPALLATAGL
                     HHHLIRAGTRSRVGLVLESGEPREVHHFCLLIGYGAQAINPYLVYECLSDMIHQGLLQ
                     NISYHDAVKGYDKACYKGVVKV"
BASE COUNT          447 a          627 c          586 g          451 t
ORIGIN      
        1 accttaacca cgcccttgta gcacgctttg tcgtaaccct tgacggcatc atggtagctg
       61 atgttttgca gcagcccttg atgaatcata tcgctcaaac attcataaac cagataggga
      121 ttgatcgctt gagcgccgta accgatcagt aagcagaaat ggtgcacttc gcgcggctcg
      181 ccggactcca gcaccaggcc gacgcggctg cgcgtgccgg cgcggatcag atgatgatgc
      241 aagccagccg tggcaagcag cgcagggatt ggcgcatggg cgcgatcgac gcccttgtcg
      301 gacaaaatca caatcgtcgc gccaccgaca atcgccgcat cggccgcttt gaatagctct
      361 tcgagcgcgc gctccaagcc cgcttggcct tcccttggat tgaacaagat cggcagggtc
      421 acggatttga tgccaggcaa actgatctgg cggagttttt ccagatcggc gttttttaaa
      481 atcggttcgg gcaagcgcaa ctgccggcaa ctctgcggtc caggattgac gagattgccc
      541 tcgctgccga tggtcaatgt cgtcgaggtg atcaactctt cgcggatcgg atcgatgggc
      601 ggattggtca cctgggcgaa cagctctttg aaatagttat agagcaattg cggcttgtcc
      661 gacaaaaccg ccagcggcgt atccgtgccc atggaaccca ccggctggat gctgttttgc
      721 gccatcggac cgatattgac gcgcagatct tcgaagttgt aaccgaacgc ctgcaaacgt
      781 tgcagcgtcg cctgatgatc gatcggcggc tcgtgatctt tcacttcggg taaatcgttg
      841 aagcgcacga gattgtccgt gagccattgg ccgtagggct cggccgaagc catctgctgc
      901 ttgatctctt cgtcgctgat gatgcgcccc tcgctggtgt cgaccaaaaa catccggccc
      961 ggctgcagcc ggcgcttttc caacacccgc tccggcggca cttcgagcac gcccacttcc
     1021 gacgccatga tcaccagatc atctttagtc acgtaataac gcgacggtcg cagcccgttg
     1081 cgatcgagca cggcgccgac aacggtgccg tcggtaaagg cgatcgacgc cgggccgtcc
     1141 cagggttcca tcagacagct gtgataatcg taaaaggcgc gctttttggc gtccatgctc
     1201 tcgtgattct cccaaggctc tgggatcatc atcatcatgg catggggcaa ggagcgaccg
     1261 ctcagcgcga gaaactccag acagttgtcg aacttggtcg aatcgctgcc atcttcctga
     1321 atgatcggaa aaactttcgt gagatcgtcg ccgaacatct ccgaggccaa catgccctgg
     1381 cgcgcatgca tccagttctc attgccgcgc agggtattga tctcgccgtt gtgaattaga
     1441 tagcgatagg gatgcgcccg tccccagctg ggaaacgtgt tggtgctgaa gcgtgagtgc
     1501 accagcgcga tcgccgactc gaactgtgga tcgctgaggt caggataaaa agtcgacacc
     1561 tggcgcgacg tcagcatgcc tttataaatc aatgtccggc tcgacaggct cggcacatag
     1621 aaaaattccc cgccgggcag tccggcgtag cgaatcgcat tctcggcgcg acgccggatc
     1681 acgaacaatt tgcgctcgaa cgcaaggtca tccgcaagat ccgcgctgcg gccgataaac
     1741 acttggcgca cgaacggttc ggtcgccttg gcaccatcgc cgaggtaaag attgtccgtc
     1801 ggcaccttgc gccaaccgag acactgctgg ccttcttctt taacaatccc ctcgatgatt
     1861 ttttcgaaac gcacgcgctg ttcacggtga tccggcaaaa aaatcatgcc aacgccgtaa
     1921 tcgctcggct ccggcagctg aaaacccaaa ccggcgcagg cctctttgag aaaaacgtgc
     1981 ggcacctgta tcaggatgcc ggcgccgtca ccgctgtttt cctcgcagcc gcaggcgccg
     2041 cggtgatcaa ggttctctaa taccgtgagc gcttgctcga cgatctcgtg cgatttttcg
     2101 cctttgatat t
//
LOCUS       DATIRS010000753         1880 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1333986, whole genome shotgun sequence.
ACCESSION   DATIRS010000753 DATIRS010000000
VERSION     DATIRS010000753.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1880)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1880)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1880
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1333986"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..810)
                     /locus_tag="VLM90_09495"
     CDS             complement(<1..810)
                     /locus_tag="VLM90_09495"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13243.1"
                     /translation="MIIDADGHTHIPPEVFDNYLDKEFHRHRPRFVTFDDGRSFYIIE
                     GRVVTKPFGWGPGTPGSIANTTPTLAAKDLDLSNVPGRLADLDLEAIDLQVIYPNVLM
                     SINSLEHAGLAGAIARAYNTWISERCAQAGGRLRFAAIVALQDPKAAAEELKHAVNSL
                     GAVGVMVSGTIGAQTLDHPNLYSFWQTVEQLDVGVGVHTVTGMYPTVGQELFDHFWGA
                     KAVSMPLTLTTAMVSLIGGGIVDLFPKIRFGLLETGCGWLPYWVERMDEMHE"
     gene            complement(857..1837)
                     /locus_tag="VLM90_09500"
     CDS             complement(857..1837)
                     /locus_tag="VLM90_09500"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13244.1"
                     /translation="MKRNAALAILIFALQLLWCSQASSQTTRKLESITLGLSARHVLN
                     LPIYMAQRHGIFDSEGFDYKPITTKTNTAIAALVSGDLDYITAFNSGLGAAIGGAPLV
                     AAYVSTDRPLLYLISRPNIKDAKSLRGGVIGHGGTRGSHYHATVTMVKHLGLDAEKDV
                     QLISTIDVTQGMTALFSGNVAATTLSPPYDSMAVRKGYNRLVMGPEILPRYLENGLVL
                     RRAKLRDNPDQVRRFLRALIRGLHYALDHPSEAVALIQKDWNLDRETAQNAYDVAMPT
                     YNLRGDASDELVATSIKRALLDAKISQSNFAPKDFVDWNIVRQVQRELKR"
BASE COUNT          373 a          508 c          586 g          413 t
ORIGIN      
        1 ctcgtgcatt tcgtccattc tctcgaccca gtagggcagc cagccgcagc cagtctcgag
       61 caggccgaag cgaattttag gaaacagatc gacgatgccg ccgccgatga gcgaaaccat
      121 cgcggtcgtc agcgtcagcg gcatcgacac tgctttggct ccccagaaat gatcgaataa
      181 ttcctgaccg acggttggat acattcccgt cacggtgtgc actccgacgc cgacatcgag
      241 ttgttccact gtctgccaaa acgaatagag attggggtga tcgagtgttt gcgcgccgat
      301 ggtgccgctg accatgacgc cgacggcgcc cagcgagttg accgcgtgtt tcagttcttc
      361 cgccgccgcc tttggatctt gcagtgcgac gatggcggcg aagcgcagac ggccgccggc
      421 ttgggcgcag cgttcggata tccaggtgtt gtaggcgcgg gcgatggcgc cggcgagccc
      481 ggcatgctcc agactgttga tcgacatcaa gacgttcgga tagatgactt gaaggtcgat
      541 ggcttcgaga tcgagatcgg ccaagcggcc gggaacgttg ctgagatcga gatctttggc
      601 cgccagcgtc ggcgttgtgt ttgcgatact cccgggagtg cccgggcccc aaccgaatgg
      661 cttcgtgacg acacgcccct caataatgta aaaactccgg ccgtcgtcga aggtgacgaa
      721 gcggggacgg tggcgatgga attccttgtc caaatagttg tcgaaaactt ccggtgggat
      781 atgcgtgtgg ccgtcggcat cgatgatcat agaacctcca atcaagcttt gttaactgtc
      841 cttgccctgt tggccgttac cgtttcagct cgcgctgcac ttggcgcacg atattccagt
      901 caacgaaatc tttcggtgcg aaattcgatt ggctgatctt ggcgtcgagc aaggcgcgtt
      961 tgatcgacgt cgcgaccagc tcatcgctgg cgtcgccgcg caggttgtaa gtcggcatcg
     1021 ctacgtcata ggcgttttgc gcggtttcgc ggtcgaggtt ccagtctttt tgaatcagcg
     1081 cgacggcttc acttgggtga tccaacgcat agtgcagacc gcggatcagc gcgcggagaa
     1141 atcgccgcac ttggtcgggg ttgtcgcgca gtttggcgcg gcgcaagacg aggccgtttt
     1201 ccaaatagcg cggcaggatt tccgggccca tgacgagacg attataaccc ttgcgcacag
     1261 ccatggaatc gtagggcggc gatagcgtgg tggcggcaac gttgccggag aagagcgccg
     1321 tcatgccctg ggttacatcg atggtcgaaa ttaactggac gtccttctcg gcatccaagc
     1381 cgagatgttt caccatggtg acagtggcgt ggtagtggct gccgcgggtg ccgccatggc
     1441 cgatgacgcc gccgcgtaga ctcttggcgt ctttgatatt cggccggctg atcaaataaa
     1501 gcagcggtcg gtcggtggaa acgtaggccg ctaccaacgg tgcgccgccg atggccgccc
     1561 ccaagccaga attgaaagcg gtgatgtagt cgagatcgcc ggagaccagc gcggcaatgg
     1621 cggtgttggt cttggtcgtg atcggtttgt agtcgaagcc ttcgctgtcg aagataccgt
     1681 gacgctgcgc catatagatc ggcagattga gtacgtggcg cgctgacaag ccgagggtga
     1741 tcgattccaa tttgcgcgtg gtctgactgc tcgcttggct gcaccaaagc agttgcagcg
     1801 caaagattag aatggccagt gcagcgtttc ttttcatagc tcaactcaaa gaaatcgatt
     1861 gtgccgaatc atatttctat
//
LOCUS       DATIRS010000754         7417 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_153457, whole genome shotgun sequence.
ACCESSION   DATIRS010000754 DATIRS010000000
VERSION     DATIRS010000754.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 7417)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7417)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7417
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153457"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            93..461
                     /locus_tag="VLM90_09505"
     CDS             93..461
                     /locus_tag="VLM90_09505"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSQ13245.1"
                     /translation="MFKRIDHVAIHVADLDRSVAFYERHFGFKHYFRQTGSGGLQIGY
                     LKLGDTVLELTHHSDGAMAGFHFCLETDSFNETVEQLQRDGVKLLRAPHDTAAREPRE
                     NGWRRVVFAGPDGEQIELRG"
     gene            534..839
                     /locus_tag="VLM90_09510"
     CDS             534..839
                     /locus_tag="VLM90_09510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13246.1"
                     /translation="MSNENKTIQVTCPCCDAILTIDSTLAVVLDHKMPVKPRMAVNLK
                     DAVNQVKGEAGRRDEKYQQLAEAEKNKSKVLEAKFQELFKKAKDEPLTKPLKDIDLD"
     gene            complement(916..1986)
                     /locus_tag="VLM90_09515"
     CDS             complement(916..1986)
                     /locus_tag="VLM90_09515"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sialidase family protein"
                     /protein_id="HSQ13247.1"
                     /translation="MLLGFLLAGCEQLPQLHLPQSQPQIVIDTGPIADPVLSAPVRVS
                     RSPEENEDPSMILARDGRFYVVWSSKQRGRVDLFISSSADGRTWSDERRIHDVPAEDY
                     YPSLMQTRDGRFHLVWCQLQRKEGRTDVWYTASRDSRTWDKPQSITNRGIDWAPTIYE
                     DAKGILRILWSSRRSGSRDIWVTRSIDGGKTWLSPDQVTRSSEEDDFPHALQATSGEH
                     YLVWTRYRRGSAMLELHKDRSSDVVLATSRDAVVWSAPVVSSFGDPDNKFVDILPAVF
                     QDPDEGQVFVSWTSGRTGARGDILARSVTSPSSHLFQLTRSEASDYSAKIVPTRQSGE
                     YLMVWVSTREGKPDIFARRLRL"
     gene            complement(2037..2507)
                     /locus_tag="VLM90_09520"
     CDS             complement(2037..2507)
                     /locus_tag="VLM90_09520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13248.1"
                     /translation="MFAANSHGKFCLSIANGALKLGQEIVLIWVPVEGERHEPEIRRG
                     KIAAKLAAPCDQGNQLVGESSYQLEAGKLDIGRIYVALAGRAIGLRVAGAEVKTRFAN
                     RDLVFRSCTSTEGFHFSIWSGTKLKEQEIWRRYFSLGYDVEPTCAERDFEEIKP"
     gene            2729..3736
                     /locus_tag="VLM90_09525"
     CDS             2729..3736
                     /locus_tag="VLM90_09525"
                     /inference="COORDINATES: protein motif:HMM:TIGR02822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HSQ13249.1"
                     /translation="MLAMVLAHPGKPLLKTSVVTPDPGPGQLLIQVHACAVCRTDLHI
                     VDGELTHAKLPLIPGHEIVGKVAQLGDGVGQFKIGDRVGVPWLGWTCDTCSYCRNGQE
                     NLCDHGRFTGYTLDGGYAEYTVADQRFCLPIPDGYGDAEAAPLLCAGLIGYRSLVKAG
                     NSKRLGIYGFGAAAHIVAQVARYQQREIYAFTRPGDAEAQNFAISLGAVWAGGSNQTP
                     PEQLDAAIIFAPAGELVPQALKAVGKGGSVVCGGIHMSDIPSFPYSILWGERTLTSVA
                     NLTRRDGAEFMALAAKVRVRTAVQEFALEEANEALRRLRGGKIKGAAVLTMAAASAAK
                     V"
     gene            complement(3738..4667)
                     /locus_tag="VLM90_09530"
     CDS             complement(3738..4667)
                     /locus_tag="VLM90_09530"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ13250.1"
                     /translation="MKVRIGIQLGQWPSRDIQPEAVLDLVDYFEALDVDSIWVSDRLI
                     SAALTLEPITFLSYIAGRLRKMKFGTSTLVLPTRNPVVLAKELATLDFLSQGRLFPAI
                     GLGGEESKDLQAVGINKKERAGRTDEMIVLMRRLWTEESVTFAGKYFSVEDATIMPRP
                     WQKNGPPIWISGRSEAALRRTGRLGDGWLVSSVSPAEVATGIDSIRRYATDAGRQVEE
                     DHYGVLIPFYFADHAEKAFEVGARSIRPRADMPTSEFTAFGTPDQVRARVQGYIAAGA
                     TKFIMRPGGPFAGWRAQVEILAREVIVPLQTAV"
     gene            complement(4677..5675)
                     /locus_tag="VLM90_09535"
     CDS             complement(4677..5675)
                     /locus_tag="VLM90_09535"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13251.1"
                     /translation="MNLPRMWPALLLASLFTLPSTLIAQSRGLKKVQVGVPAISMGNI
                     VIYFTKEAKIFEKYGLDVEPVAVAGSGIASKALISGSVQISPIATPTVMNSVLAGSDM
                     VILGHTMPGVIQYLMARSDIKRTEDIKGKTIGVTTFGSLTDFLVKYLAKQKGLNPDKD
                     FAMLQIGSDSDRFIAMQQGRIPMATLSHPNYFFAQRAGFHILWDFFKEVDYPWSEIAT
                     TRTQIKQDRDLVMRYMRAHVEGIARFKQEPELGKRVIKKMLRLNDDAMAQESWELFAK
                     HRIAAPYPNIKGMKTSYEYVAATRPDIYKHKPEEFIDASFVEELDKSGFIKKLYEK"
     gene            5796..6815
                     /locus_tag="VLM90_09540"
     CDS             5796..6815
                     /locus_tag="VLM90_09540"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSQ13252.1"
                     /translation="MLPNLPRENLLELCRRMFVVRHFEENLVKLHDRGVFGGHYHLYV
                     GQEATGVPALACLRADDYLFTTHRNHGHLLARGVEPKQLFAEILGRVDGLNKGKGGSF
                     HSVAPSLGFLHSSGVVAGIIPLSTGTAYASKAQKNGRLTVCLFGDGSLEEGAAPEAFN
                     IASLLKLPVLFLCENNGKYGTGRAVAAAQSSSMAAYPLTDLPKAYKIPAQQIDGIDAG
                     LVHATISAAVEKIRRGEGPQFVEAQTVRYPGSATNWPTVPAPTDTALAWDVSQVPENS
                     REWYRSADPLLVYVRELVEANQATRDEIAAIESQVKSVIAAAVDFAVNSPYPKPEEAE
                     RDFFA"
     gene            6825..>7417
                     /locus_tag="VLM90_09545"
     CDS             6825..>7417
                     /locus_tag="VLM90_09545"
                     /inference="COORDINATES: protein motif:HMM:NF014798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13253.1"
                     /translation="MRELAYYEAKFEALDEIMSGDERVHLINGTFLSLSPHRHVFQNL
                     QKKFSARMFAPPISELGFCGLATGAAMAGLRPIVDLSTGSFIYEAWPQVANEAANAYS
                     MSGGQTRVPVVFHLFHGLRGGGAAQHSGSPQAMLWNVPGLEIVIPASPRDVKGLLKTA
                     VASDNPTIFVDHTRLLDIRGDVPENDKPIPFGVADIKR"
BASE COUNT         1597 a         2209 c         2107 g         1504 t
ORIGIN      
        1 attgtaacgc gaaggcgaga atttttcacg ttggcgcatt atccttgctt tcaccgcagc
       61 gaacagccta tgctcgcacc gaggggaaag ccatgttcaa gcgcatcgac catgtcgcca
      121 ttcatgtcgc cgatcttgac cgttcggtgg cattctacga aagacatttt ggctttaaac
      181 attattttcg ccagaccggt agcggcggcc tgcagattgg gtatctaaaa ttgggcgaca
      241 cggtgcttga actgacgcac cacagcgatg gggcgatggc cggtttccat ttctgcctgg
      301 agaccgacag ttttaacgag acggtcgagc agctgcagcg cgatggcgtc aaactcttgc
      361 gcgcgcccca tgataccgcc gcccgtgagc cgcgggaaaa cggctggcgc cgggtcgtct
      421 tcgccggccc ggacggagaa cagatcgagt tgcggggatg aggaaggcat gaggcaaaag
      481 gcgcgagaaa cgaataaaaa tcctgcctaa cgcgtctcgc ttaggagtcg acgatgtcca
      541 acgaaaataa aaccatccaa gttacctgcc cgtgctgcga cgcaatactg accatcgatt
      601 cgacactcgc cgtcgtcctc gaccacaaaa tgcctgtcaa gccgcgcatg gcggtgaatt
      661 tgaaagatgc tgtgaaccag gtcaagggag aagccggccg gcgcgatgaa aagtatcagc
      721 agctcgcaga agcggaaaaa aacaaatcga aagttttaga agcaaagttt caagaactgt
      781 tcaaaaaagc caaagacgaa ccactcacca aaccgctgaa agatatcgat ctcgattaga
      841 cggatcgccc atctaagcaa gttggcaagt tcgaattagc aaattggccc ggccaatgca
      901 tcgcatcatc gccggttaga gtctgaggcg gcgcgcaaag atatcgggct tgccctcgcg
      961 ggtcgacacc cagaccatca agtactcgcc ggattgccgg gtcggcacga tcttcgccga
     1021 atagtcgctg gcctccgatc gggtcaactg gaacagatgc gatgacggcg acgttacgct
     1081 gcgcgccaag atgtcgccac gcgcgccggt gcgaccggaa gtccaactga cgaagacttg
     1141 cccttcgtcg gggtcttgga agaccgccgg caggatgtcg acaaacttat tgtcgggatc
     1201 gccgaacgac gacaccaccg gcgccgacca aaccacagcg tcacgcgaag tagcgaggac
     1261 gacatcggaa ctgcggtctt tgtgcaactc gagcatcgcc gaaccgcgcc ggtaacgggt
     1321 ccaaaccagg tagtgctcgc cgctcgtcgc ttgcagagcg tggggaaagt cgtcttcctc
     1381 ggagctgcgc gtcacctggt cgggcgacag ccaggtcttg ccgccgtcaa tcgagcgggt
     1441 cacccaaatg tcgcggctgc ccgaccggcg cgacgaccac aggatccgca agataccctt
     1501 ggcgtcctca tatatcgtcg gtgcccaatc gatgcctcgg ttagtgatcg actgcggttt
     1561 gtcccacgtc cggctgtcgc gcgaagcggt ataccaaaca tcggtgcggc cttcttttct
     1621 ttgtagttgg caccagacta ggtgaaatct accatcgcgc gtctgcatca gcgacggata
     1681 atagtcctcg gcgggaacat catggatgcg ccgctcgtca gaccaggtgc ggccgtccgc
     1741 cgaactgctg atgaacagat ccacccggcc gcgctgtttt gaagaccaaa ccacgtagaa
     1801 ccggccatcc cgcgccagaa tcatgctcgg gtcttcgttt tcctccgggc tgcggcttac
     1861 ccgcaccggc gccgacaata ccgggtcggc gatgggcccg gtatctataa caatctgcgg
     1921 ctgggactgc ggcaaatgca actgcggtag ctgttcacag ccggccagca agaatccgag
     1981 tagcatggtg gtcgcagcga taatccgctg aggcaatttg tctgttaatt cttcgatcaa
     2041 ggttttatct cctcaaagtc ccgctccgcg caggtcggct cgacatcata gccaagagag
     2101 aaatagcgcc gccaaatttc ttgctccttc agtttggtcc ccgaccaaat actgaaatgg
     2161 aaaccttcgg tactcgtgca tgagcgaaaa acaagatcgc gattggcgaa acgagttttc
     2221 acttcagcgc cggccacccg caacccgatc gctcggccgg ccagcgcgac atagatccgg
     2281 ccgatatcaa gcttacctgc ttccaactga tagctggatt caccgacaag ctgattgcct
     2341 tggtcacaag gtgccgccag cttcgccgcg atcttgccgc ggcgtatctc cggctcgtgc
     2401 cgctcgcctt caactggaac ccagatgagc acgatctcct ggcccagctt aagcgcgccg
     2461 ttggcgatcg acaaacaaaa cttgccatgt gagttggccg caaacaagcc gaagtctcgc
     2521 gaccagtgga tggtcgcatc ttgccttggt tgctgcgcgg caatcccctg ctcaggccca
     2581 ctgcccagag taaagccaaa gcggccattg gcgtaatcat aacagtccgg cgagagttta
     2641 aatcacgctt aatatatcat gactttcacg gcgtggcgta ttctgattat aagttggttt
     2701 ccgtcgtcgg tttggttaaa aagcaactat gttagccatg gtcctcgccc atccgggaaa
     2761 accgctacta aaaacttcgg tcgtcacacc cgatcccggc ccaggccaac tgttgatcca
     2821 agtccacgcc tgcgccgtct gccgcaccga tctgcacatt gtcgacggcg agttaacgca
     2881 cgccaaactg ccgctcatcc ccggccatga gatcgtcggc aaagtggcgc aactgggcga
     2941 tggcgtcggt caatttaaaa tcggtgaccg cgtcggcgta ccctggttgg gctggacctg
     3001 cgacacctgt tcgtattgtc gaaatggtca ggaaaatctc tgcgaccacg gcagattcac
     3061 cggctacacc ctcgacggcg gctacgctga atacaccgtc gccgatcagc gcttctgctt
     3121 gccaattccc gacgggtatg gcgacgctga agccgcgccg ctgctgtgcg ccggactgat
     3181 cggctaccgc agtctggtca aagccggcaa cagcaaacgc ttgggcatct acggcttcgg
     3241 cgccgccgcc catatcgtcg cccaggtagc gcgctatcag caacgcgaga tctacgcctt
     3301 cacccggccc ggcgatgcag aagcacagaa cttcgcgatc agtttaggcg cggtatgggc
     3361 cggcggttcg aaccaaacac cgccagagca actcgacgcc gccattattt tcgctcccgc
     3421 aggtgaatta gtgccacaag cgctaaaggc tgtcggcaaa ggcggctccg tcgtctgcgg
     3481 cggcatccac atgagtgaca tcccgtcatt cccgtactcg attctctggg gagaacgcac
     3541 gttaacatcc gtcgccaacc taacccgccg cgacggtgca gagttcatgg cgctggcagc
     3601 gaaagtgcgg gtgcgcacgg cagtacagga gttcgcgtta gaagaagcca atgaagcatt
     3661 gcgtcgactg cgtggcggta agattaaagg cgcggcggtg ctgacgatgg ccgcagctag
     3721 cgcagcaaag gtgtgactta gaccgctgtc tgcagcggca cgatcacttc acgcgccaaa
     3781 atctccactt gcgcgcgcca gccggcaaac ggtccgccag gacgcatgat gaacttggtc
     3841 gcgccggcgg caatatagcc ttgaactctg gcgcggactt ggtcgggtgt gccaaaggca
     3901 gtgaattcgc tcgtcggcat atcggcgcgc ggacggatcg agcgtgcgcc aacctcgaaa
     3961 gctttctcag catggtcagc gaagtaaaaa ggtatcagca cgccgtagtg atcctcttcg
     4021 acctgtcggc cggcatcggt tgcgtagcga cgaatcgaat cgatccccgt tgcaacttca
     4081 gccggagaca ccgacgagac cagccagccg tcgcccaatc ggccggttct tctcagcgcc
     4141 gcttcgctgc gcccgctgat ccagatcggc gggccatttt tttgccatgg ccgcggcatg
     4201 atggtcgcgt cttcgactga aaagtatttg ccggcgaagg ttacgctctc ttcggtccac
     4261 aagcggcgca tgagcacgat catctcatcg gtgcgcccgg cgcgttcttt tttatttatc
     4321 cctaccgcct gcaaatcttt cgactcctcg ccgccgagac cgatggctgg aaacaatctt
     4381 ccttgggaga gaaaatccaa cgtcgcgagc tctttggcga gcaccaccgg attgcgcgtc
     4441 ggcagcacca gtgtgctggt gccgaacttc atcttgcgca gccggccggc gatataggag
     4501 agaaacgtga tcggttcgag ggttaaggcc gccgagatca gccggtcgct cacccagatg
     4561 gagtcgacgt caagcgcttc gaagtagtcg accagatcga gcaccgcctc gggctggatg
     4621 tcgcggctcg gccactggcc gagctgtatc ccgatgcgga ctttcatatt tgccaattac
     4681 ttttcgtaaa gcttcttgat gaagccgctc ttgtcgagtt cttcgacgaa actggcgtcg
     4741 ataaactctt cgggcttgtg cttataaata tccggccggg tcgccgccac atactcgtag
     4801 ctggtcttca tgcctttaat gtttggatag ggtgcggcta tgcggtgctt ggcaaatagc
     4861 tcccaggatt cttgggccat cgcatcgtcg ttcaagcgca gcattttttt gatcacgcgt
     4921 ttgcccaact ccggttcttg cttgaagcgg gcgatgccct cgacatgagc gcgcatgtag
     4981 cgcatcacca agtcgcggtc ttgcttgatc tgcgtgcgcg tggtggcgat ctcgctccac
     5041 ggataatcga cctccttgaa aaaatcccac aggatgtgaa agccggcgcg ttgggcaaag
     5101 aaataattcg gatgcgacaa ggtcgccatc ggaatccgcc cctgctgcat ggcgatgaac
     5161 cggtcgctgt cggaaccgat ctgcagcatg gcgaagtctt tgtccggatt gagccccttt
     5221 tgtttggcca gatacttgac gagaaaatca gtgagcgaac cgaaggtcgt cacgccgatg
     5281 gtcttgccct tgatgtcttc ggtgcgcttg atgtccgagc gcgccatcaa gtactgaatg
     5341 acgcctggca tggtgtgccc gagaatcacc atgtcggagc cggcgagcac cgagttcatc
     5401 acggtcggcg tggcgatcgg cgagatttgc acgctgccgg agatcaacgc cttcgaggcg
     5461 atgcccgaac cggccaccgc caccggttcg acatcgaggc catacttctc gaaaattttc
     5521 gcttctttgg tgaaataaat gacgatgttg cccatgctga tggcgggcac gccgacttga
     5581 acttttttga gcccgcggga ctgcgcgata agcgtggatg gaagggtgaa tagactcgcc
     5641 agcaaaagcg ccggccacat acgcggtaga ttcataattc aaacctccgt cgaaataccg
     5701 atctttagtg gcatttagtc ccgccttgaa tggcttgtca atgttcgttc ccggcgttga
     5761 caaagcccag tggattgaaa taagtcagaa acatcatgtt accgaattta ccgagagaaa
     5821 atctgttgga gctgtgccgg cggatgttcg tcgtccgcca ttttgaagag aatctcgtga
     5881 agttgcacga ccggggcgtg ttcggcggcc actaccatct ctatgtcggc caggaggcca
     5941 cgggtgtgcc ggcactcgct tgcctgcgcg ccgacgacta tctcttcacc acgcacagaa
     6001 atcatggcca tctgctcgcc cgcggcgtcg agccgaagca gctcttcgcg gaaatcttgg
     6061 gccgcgtcga cggcttgaat aaaggcaaag gcgggtcgtt tcactcagtc gcgccgtcgc
     6121 tgggatttct ccatagctca ggggtcgtcg ccggcatcat tccgctgtcg accggcaccg
     6181 cctacgcgtc caaagcgcag aagaacggcc gcctcacggt ttgcctgttc ggcgacggct
     6241 cgcttgaaga aggcgccgca ccggaagcgt tcaatatcgc gtcacttttg aaattgccgg
     6301 tgctgtttct ctgcgagaac aacggcaaat acggcaccgg ccgcgcggtg gccgcggcgc
     6361 aatcgagctc catggcagcc tatccgctca ccgatctgcc gaaggcgtat aaaattccgg
     6421 cgcaacaaat cgatggcatc gacgccggct tggtgcatgc gacaatctcg gcagcggtcg
     6481 agaaaattcg ccgcggcgag ggaccgcaat tcgtcgaagc gcagacggtg cgctatcccg
     6541 gcagcgcaac caactggccg acggtaccgg cgccgacgga cacagccttg gcgtgggacg
     6601 taagtcaggt gccggagaat tctcgcgagt ggtaccgcag cgccgatcca ttattggttt
     6661 atgtccgcga gttggtcgaa gcgaatcaag cgacccgcga cgagatcgcc gccatcgaga
     6721 gccaggttaa atccgtgatc gccgccgccg tcgacttcgc cgtcaacagc ccctatccaa
     6781 aaccggaaga ggcggagcgc gacttcttcg cctaagagtt aattatgaga gaacttgctt
     6841 actacgaagc taaattcgaa gccctcgacg agatcatgag cggcgatgaa cgcgtccatc
     6901 tgatcaacgg cactttcctg agcttgagcc cgcaccgtca cgtctttcaa aacctgcaaa
     6961 aaaaattcag cgcgcggatg tttgccccgc cgatatccga gttgggcttc tgcggtctcg
     7021 ccaccggcgc ggcgatggcg ggactccgcc ccatcgtcga tttgagcacc ggtagtttca
     7081 tctatgaagc ctggccccag gtcgccaacg aagctgccaa tgcttactcc atgtccggcg
     7141 gccagacccg cgtgccggtg gtgttccatc tatttcatgg actgcgcggc ggcggcgcgg
     7201 cgcagcattc gggcagcccg caagcgatgc tgtggaacgt tcccggattg gaaatcgtca
     7261 tcccggcgtc gccgcgcgat gttaaaggat tattgaaaac cgccgttgcc agcgacaacc
     7321 cgacgatctt cgtcgatcac acccggctct tggacatccg cggcgacgtg cccgagaacg
     7381 acaaaccgat tccgttcggc gtcgccgaca tcaaacg
//
LOCUS       DATIRS010000755         2102 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1825990, whole genome shotgun sequence.
ACCESSION   DATIRS010000755 DATIRS010000000
VERSION     DATIRS010000755.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2102
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1825990"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1150
                     /locus_tag="VLM90_09550"
     CDS             <1..1150
                     /locus_tag="VLM90_09550"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSQ13254.1"
                     /translation="ILTRVGRGTPGGEMLRRYWHPIGFTNELKNRPVKRRLLGEDLVL
                     FRDDKGRAGLLALYCMHRGTSLEFGHVEDGGLRCCYHGWLYDVQGKILETPGEPTDST
                     FRERVRHPAYKVQELAGIVFAYLGPEPAPLLPRYDVLVREDGVRSRSGRVVHCNFLQM
                     VENSVDQHHFKWLHRTPKTRHWKDEKLTSDPTEFGIRDTFTRRVGDEYFRTISLFLMP
                     NMNKVGYHLPEDHPAAFAATHEGYEALRWRVPIDDTNTMHFTLYFAPLIDGKAAKIPP
                     DQAEKGLLDSVHGQYRWDEETGWIARGDQDRCAQESQGAIFDRTQEHLGVSDEGVILL
                     RKMFKQSIEAVQRGEDPVGIIRDPAKNQILRWVPAEYKLNPESGAAHE"
     gene            1143..>2102
                     /locus_tag="VLM90_09555"
     CDS             1143..>2102
                     /locus_tag="VLM90_09555"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HSQ13255.1"
                     /translation="MNSWRYLISLFCSLTLLSAAAPSFSADSLESLIAGAKKEDEITF
                     VAGAQTFGGRKGLADLESAFNRRFGLKTRISFAAGPDMNARAARHITEIKSGRNASSD
                     IFLGSQSHQALMHVEKALEKVNYAGLFPWVSKEMEIYPNEAVLVYTSPNGIVYNVNLV
                     PKDKAPKSYFDLVDPRLSPTWAGKLAIPPYVAWLAELSLNWGNDKVKDFARKLVAISG
                     GRLRYSEEERIVSGEFPVMANLGDALGAMWTWQAKGAPIAAVPGTSPINTDYFQLSVP
                     KNVAHPNIAKLFVAFMATKEAQAILQKHESRSSHLVEGTIMQKY"
BASE COUNT          462 a          575 c          638 g          427 t
ORIGIN      
        1 aatcctgact cgagtcggcc ggggcacgcc cggcggcgag atgctgcgac gctactggca
       61 ccctatcggt tttaccaatg agctaaagaa tcgcccggtc aaacggcggc tgctgggcga
      121 agacctggtg ctgtttcgcg acgataaggg ccgcgcgggt ttgctcgcat tgtactgcat
      181 gcatcgcggc acgtcgttag aattcggcca tgtcgaagac ggcgggctgc gctgttgtta
      241 tcacggctgg ctctatgacg ttcagggtaa gattctcgaa acacccggcg agccgacgga
      301 cagcacattt cgcgagcgag tgcgccatcc cgcctataag gtacaggagc tagccggcat
      361 cgttttcgcg tatctcggtc ctgagccggc gccgctcttg ccgcgttacg atgttctggt
      421 gcgtgaggac ggcgtgagat cgcgcagtgg aagagtcgtt cattgtaatt ttttgcaaat
      481 ggtcgagaac agcgtcgatc agcaccattt caagtggctg caccgcacgc cgaagacccg
      541 ccactggaaa gacgagaaac tcacttcgga tccaactgag ttcggcattc gcgatacctt
      601 cacccgccgc gtcggcgatg aatattttcg cacgatcagc ctattcttga tgccgaacat
      661 gaacaaagtc ggctatcacc ttcctgagga ccatccggct gcgtttgccg cgacacatga
      721 gggctatgaa gcgctgcgct ggcgtgtgcc gatcgacgat accaatacga tgcatttcac
      781 gctttacttc gcgccgctga tcgacggcaa ggcggcgaag atcccgcccg atcaagcgga
      841 gaaagggttg ctcgacagcg tgcatgggca gtaccgctgg gacgaagaaa ccggctggat
      901 cgcccgaggt gatcaagacc gctgcgcgca ggagagccaa ggagccatct tcgaccgcac
      961 gcaggagcac ctcggcgtgt cggacgaagg cgttatttta ctgcggaaga tgttcaagca
     1021 gtccatcgaa gccgtgcagc gcggcgagga cccggtgggg attattcgtg atcccgccaa
     1081 gaaccaaatc ctccgttggg ttccggctga atataagtta aatccggaaa gtggggccgc
     1141 tcatgaatag ttggcgttat ctgatatctc ttttttgttc gctcactctc ttatccgctg
     1201 ctgcgccgag tttttccgct gactcgctgg agtcgctgat cgccggagcg aaaaaggagg
     1261 acgaaatcac cttcgttgcc ggcgcgcaaa ctttcggagg aagaaaaggg ctggcggatc
     1321 tggagagcgc gttcaaccgg cgtttcggct tgaaaacgcg catcagtttc gctgcggggc
     1381 cggacatgaa tgcgcgggcg gcgcgccata tcacggagat caagtcaggg cgtaacgcct
     1441 cgtcggatat attcctcggt tcgcaatcgc accaggcatt gatgcacgtg gaaaaggccc
     1501 tggagaaagt caactacgca gggctgttcc cctgggtgag caaggagatg gaaatttatc
     1561 ccaacgaagc cgtgctggtt tatacgtcgc ccaacggcat cgtttacaac gtcaacttgg
     1621 tcccgaaaga caaagcgccg aaaagctatt tcgatctggt cgatccgcgc ttgagcccga
     1681 cctgggcggg aaagttagcg ataccgccct acgtcgcatg gctggcggaa ttatccctca
     1741 actggggcaa cgataaggtt aaggatttcg cgcgcaaact cgtggcgata agcggcggcc
     1801 ggctgcgcta cagcgaagag gaacggatcg tcagcggtga atttccggtc atggccaatc
     1861 tcggcgacgc gttgggcgcc atgtggacgt ggcaggcgaa aggcgcgccg atcgcggcgg
     1921 tgccgggtac atcgcccatc aacacggatt attttcagct cagcgtgccg aaaaatgtcg
     1981 cccatcccaa tatagccaag ctgtttgtcg cgttcatggc tacgaaggag gcgcaagcga
     2041 ttctgcaaaa acatgagtcg cgcagttcgc acctggtgga agggacgatc atgcaaaagt
     2101 ac
//
LOCUS       DATIRS010000756         1839 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_449658, whole genome shotgun sequence.
ACCESSION   DATIRS010000756 DATIRS010000000
VERSION     DATIRS010000756.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1839
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_449658"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(184..1320)
                     /locus_tag="VLM90_09560"
     CDS             complement(184..1320)
                     /locus_tag="VLM90_09560"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13256.1"
                     /translation="MRVIDADGHVEENPLTFSDKYFDPAFRAHRPVVVPGTEEGLAYW
                     MIDEQLFPRRVGRGCNNLGTPASYNGKPVRHAQRKPDTLGSMELTNLSERLQIMDEEN
                     IDLQVLYPTLFLAYPLSSNPAYTSAMCRAYNRWLGDVLAGQERLKWVGVANLDDIPGA
                     VKQVNEAKQLGAVGMMILGTAGDRLLDDDSLLPFYEAVASEELPLAVHVGWACPALNN
                     LYTHIYPSGVIPFLMPVLMGMVSMMSGGIFDRFPNMRVVYLEAGCLWVHFILERLHHR
                     FEHSGKNLANVVSRTAPIEKLAPMDYIKQGNIYFSSEVEDILLPHVLELVGDGQMMFA
                     SDMPHGDRERFAAKTLQGRSDITDAAKTKILEANPVKFYRLPGF"
     gene            complement(1418..>1839)
                     /locus_tag="VLM90_09565"
     CDS             complement(1418..>1839)
                     /locus_tag="VLM90_09565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13257.1"
                     /translation="LKLGHHTLLDVASLGIPYAFTGMTTRGRLIKEDADLVRRYMMAQ
                     TEAIARAKRDKNMALKVMGKYLRTTNPNALAESYDIDVQKYLLRVPLTTAEAMKSVLD
                     DLAGRIPKAKDADPRKFFDDSFVRQMQSSGFIDALYK"
BASE COUNT          391 a          496 c          551 g          401 t
ORIGIN      
        1 aaccacggcg gacgaagata tgggcaattg aaaaacagag tgcggcttgg aaggcgtagt
       61 attcggccat tgaggatgat tcggtcgcag gaaaactacg cgtttatcta gggcctgttg
      121 ccaagagcga ggtgaactct aacggcatcg attgcgaatt taatctgatt cttggcgatg
      181 ccgctagaac cccggtaagc gataaaactt cactggattc gcttccagga tcttggtctt
      241 ggccgcgtcg gtgatatcgc tgcgaccctg caaggtcttg gcggcgaaac gttcgcggtc
      301 gccatggggc atgtcggagg cgaacatcat ttgcccgtcg ccgactagtt ccagcacatg
      361 gggcaagagg atgtcctcga cctccgagct gaaataaatg ttgccttgct tgatgtagtc
      421 catcggcgca agcttttcga tcggcgcggt gcgcgagacg acgttggcaa ggtttttccc
      481 cgaatgttca aagcggtgat gcaaccgctc gagaatgaaa tgaacccaca ggcagccggc
      541 ttcgagataa accacgcgca tattcggaaa ccggtcgaag atgccgccgc tcatcatcga
      601 caccatgccc atgagcaccg gcattaagaa cggaatcact cccgacggat aaatatgggt
      661 gtagaggtta ttcagcgccg ggcaggccca gccgacatga accgctaaag gcagttcttc
      721 actggcgacc gcttcgtaaa acggcaacag actatcgtcg tcgagcagcc gatcgccggc
      781 cgtgccgagg atcatcatgc cgacggcgcc gagctgtttc gcttcattaa cttgctttac
      841 cgcgccggga atgtcgtcga ggttggccac cccgacccac ttcaaccgct cctggccggc
      901 aagcacgtcg ccgagccagc gattataggc ccggcacatg gcgctggtgt aagcgggatt
      961 gctgctcagc ggataggcga ggaacagcgt tggataaaga acttggaggt cgatgttctc
     1021 ctcatccatg atctgcagcc gctcgcttaa gttagtcagc tccatgctgc cgagggtgtc
     1081 gggcttgcgc tgggcgtggc gcaccggttt gccgttataa cttgccggcg tgccgaggtt
     1141 attgcagccg cggccgacgc ggcgcggaaa caactgctcg tcgatcatcc aataggcgag
     1201 gccttcttcg gttcccggaa cgacgactgg acgatgggcg cgaaaggccg ggtcgaagta
     1261 cttatcgcta aaagtaagcg gattttcttc aacatggccg tcggcatcaa tgacacgcat
     1321 gaaaccctac ctccagatct atcgataatt tcttatatca ggcaggcccg tggggcaaac
     1381 caaaggtgga ttttgacgct tgcgatagca cgcgcagcta tttgtagagg gcgtcgatga
     1441 agccgctgga ctgcatttgc cgcacgaagc tgtcgtcgaa gaattttctt gggtcggcgt
     1501 ctttggcttt cgggattctc ccggcgagat cgtcgagcac cgatttcatc gcttccgccg
     1561 tggtcagtgg cacccgcagc aggtattttt gcacgtcgat gtcataggac tcggcgaggg
     1621 cattgggatt ggtcgtgcgc agatatttgc ccatgacttt gagcgccata ttcttatcgc
     1681 gcttggcgcg ggcgatcgct tcggtctgcg ccatcatgta acggcgcacc agatcggcgt
     1741 cctctttaat caaacggccg cgggtggtca tgccggtgaa ggcgtaaggg atgcccaacg
     1801 acgcgacgtc gagcagcgtg tggtggccaa gcttcagtg
//
LOCUS       DATIRS010000757         2963 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1236400, whole genome shotgun sequence.
ACCESSION   DATIRS010000757 DATIRS010000000
VERSION     DATIRS010000757.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2963)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2963)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2963
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1236400"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(157..1416)
                     /locus_tag="VLM90_09570"
     CDS             complement(157..1416)
                     /locus_tag="VLM90_09570"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ13258.1"
                     /translation="MQFPFFYGWIIVAIAMLAGFISSGVSNVTMAVVLKPISEDLGWS
                     RSVTAAAIALGSFGGGMLSPLFGPVADRFGPRVLLPLGGILVGMLSIGVSLSTAPWQF
                     YATFIPARALTEFLLCGVVPYTAIANWFHAKRPRAMGLVAMSTPLGSAAMTLIYQFLV
                     THYGWRSAFLVLGLAFLFLVVVPAAIFLRRQPEDLGMYPDGVAPILHPDAISTAAVPN
                     SANAERSWTRAQAVQTSALWLLVASVFLASLGTGGIAFHTVAYFTDVQVPPAVAAGAV
                     SVMALSGALGNGVWGALAERLSPRSLSVTTTALSAASVALLMHVNTPLTAYLFGVLFG
                     ISARGGTAVLTQIMLAHYFGRRSFGAISGVLEPFHKGGLGVGALVAGVAFDWSGNYRA
                     ALLFFLTSYLLSALLVFFARRPLLPLP"
     gene            1519..2949
                     /locus_tag="VLM90_09575"
     CDS             1519..2949
                     /locus_tag="VLM90_09575"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ13259.1"
                     /translation="MADVTDMRGYIEVLKEMGELRELNGVDLDLEVGALTERAAEKEG
                     DALLFNNFKNYPSGFRVITNVFRTCKRTGPAMGIAAQNGIDFLHEWRKKLAAYKPVPV
                     QQVEGGPVMENQMVDDQVDLYKFPTPKWHDLDGGPFIGTGCGVITKDLDTGKINVGTY
                     RVMVQDKNHVSVKMNMGKHGRLSFERARDAGKPLPIAITLGQGPAVFLAAQMPLPPDV
                     NEFEFAGYLQGAPVAVARGAVTGLPIPANAEIVLEGELPPMKDEDMPKEGPFGEWPGY
                     FTDENVGETPVMTVKRVYYRNNPILLGAPPLKPPASYLPMPLGAATLWEQLEKAGIPE
                     VKGVWGFVYGGQPGPFTVVAIKQRYAGHAKQALLVAAGARAGAYGGKFVVVVDDDIDI
                     TNPGEVIWAIATRCYVRGGIDIIKDVWASVCEPAMPPEERSPRGYTSDRVLIDACRPY
                     KWMDQFPAVNAFEKDFKDRIADKFKL"
BASE COUNT          714 a          907 c          865 g          477 t
ORIGIN      
        1 cttgcgcggc gtaggcgggc gcgaatagtg acagcaagaa aaaagcgatc aacagctgga
       61 aacgacgcgg cgaaatcatg ctgacaaagc taaaggatga ggtcccaaag tcaagatcgc
      121 tcgggccgaa gcgattcgcc cgcgcgggtt cccggcttac ggcaatggca aaagcggccg
      181 gcgcgcaaaa aagaccagca gggcggatag caggtagctg gtgagaaaaa acagcaaagc
      241 ggcgcgatag ttgccgctcc aatcgaaggc cacgccggcc accaaggcgc cgacgcccag
      301 gccgcctttg tgaaacggtt cgagcacacc actgatagcg ccgaaggagc gccggccgaa
      361 atagtgcgcc agcatgattt gggtcaacac cgccgtgccg ccgcgcgcgc tgatgccaaa
      421 gagtacaccg aacagatagg cggtgagcgg cgtattgaca tgcatcaaca acgccaccga
      481 cgccgccgac agcgccgtcg tcgtcacgct caaactgcgc ggtgaaagcc gctccgccaa
      541 ggcgccccag acgccgttgc cgagcgcccc cgatagcgcc atcacgctca ccgcgccggc
      601 ggcgacggct ggtggaacct gcacatcggt aaaataagcg acagtgtgaa aggcgatgcc
      661 gccggtgcca agcgacgcaa gaaatacgct cgccaccagc aaccacagcg cactcgtctg
      721 caccgcttgc gcgcgcgtcc aactgcgctc ggcattcgcc gaattcggca ccgcagccgt
      781 cgagatcgcg tcagggtgta aaatgggcgc cacaccgtcg ggatacatgc ccagatcttc
      841 gggttggcgg cgcaggaaaa tcgccgccgg cacgacgacc aaaaacaaaa atgccaagcc
      901 taaaactaga aacgcactgc gccagccata gtgggtgacg agaaactgat agatcaaagt
      961 catcgccgcc gaacccagcg gtgtcgacat cgccaccaac cccatggccc gcggccgctt
     1021 ggcgtgaaac caattggcaa tggccgtgta agggacgacg ccgcaaagga gaaattccgt
     1081 cagtgcccgc gccggaataa atgtcgcgta aaactgccaa ggcgccgtgc tcagactcac
     1141 gccgatggac agcatgccga ccagaatacc accgagcggc aacaacaccc gcggcccaaa
     1201 gcgatccgcc accgggccga acaatggcga cagcatgccg ccgccaaacg atcccagtgc
     1261 aattgccgcc gccgtgacgc tccggctcca gccgagatct tcgctgatag gcttcaacac
     1321 caccgccata gtgacattgc tcacgccgga tgaaataaaa cccgcgagca tggcgatggc
     1381 gacaatgatc cagccgtaga agaatggaaa ctgcaccaag ctgtcttact atacttccga
     1441 aataaatatc agcccgccat ccttcgattg actcccctct cccgccacca tactattgcg
     1501 ccaatttagg aggaaccaat ggctgacgtt accgacatgc gcggctacat cgaagtgctc
     1561 aaagagatgg gtgagctgcg cgaactgaac ggcgtggatt tggacttgga ggtgggcgcg
     1621 ctcaccgagc gggcggcgga aaaagaaggc gacgcgctgc tgttcaacaa ttttaaaaac
     1681 tatccgtcgg gttttcgcgt tataaccaac gtctttcgca cctgcaagcg caccgggccc
     1741 gcgatgggca tcgccgcgca aaacggcatc gattttctcc acgaatggcg caaaaagctc
     1801 gcggcctata aacccgtgcc ggtacagcag gtcgaaggcg gcccggtgat ggaaaaccag
     1861 atggtcgacg atcaggtcga tctctataaa tttcccacgc ccaaatggca tgatctcgac
     1921 ggcgggccgt ttatcggcac cggctgcggc gtcatcacca aagacctcga caccggcaag
     1981 atcaacgtcg gcacctaccg ggtcatggtg caagacaaaa atcacgtctc ggtaaagatg
     2041 aacatgggca aacatggccg gctttctttt gagcgcgccc gcgatgccgg caagccgttg
     2101 ccgatcgcaa tcaccctggg ccaaggaccg gcggtgtttc tcgccgcaca gatgccgttg
     2161 ccgccggatg tcaacgagtt tgaattcgcc ggttatctac aaggcgcgcc ggtcgccgtc
     2221 gcgcgcggcg cggtcaccgg actgccgatt ccagccaacg ccgaaattgt tctggaaggc
     2281 gaactgccgc cgatgaaaga tgaagacatg ccgaaggaag gtcccttcgg cgagtggccg
     2341 ggatatttca ccgatgaaaa cgtcggcgaa accccggtga tgacggttaa gcgcgtttac
     2401 tatcgcaaca atccgatcct gctcggcgcg cccccgctca agccgccggc gagttatctg
     2461 ccgatgccgt tgggcgcggc cactttgtgg gaacaattag agaaggccgg catccccgaa
     2521 gtcaaaggcg tgtggggttt tgtttacggc ggacagccgg gaccattcac cgtggtcgcg
     2581 atcaaacagc gctacgccgg ccacgccaaa caagcgttac tggtcgccgc cggcgcccgc
     2641 gccggagctt atggcggcaa gtttgtcgtc gtcgtcgatg acgacatcga catcacaaat
     2701 ccaggagagg tgatctgggc catcgccacg cgctgctacg tgcgcggcgg catcgacatc
     2761 atcaaagacg tttgggcttc ggtgtgcgaa ccggcgatgc cgccggagga acgttcaccg
     2821 cgcggttaca cgtcggaccg cgtgctcatc gatgcttgcc ggccgtataa atggatggat
     2881 cagttccctg cagtcaatgc cttcgaaaaa gatttcaaag acaggatcgc cgataagttt
     2941 aagttataag ggggttttgc cca
//
LOCUS       DATIRS010000758         1518 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_547208, whole genome shotgun sequence.
ACCESSION   DATIRS010000758 DATIRS010000000
VERSION     DATIRS010000758.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1518
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_547208"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            39..1193
                     /gene="acd"
                     /locus_tag="VLM90_09580"
     CDS             39..1193
                     /gene="acd"
                     /locus_tag="VLM90_09580"
                     /EC_number="1.3.99.32"
                     /inference="COORDINATES: protein motif:HMM:NF045552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003995 - acyl-CoA dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0019439 - aromatic compound catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaryl-CoA dehydrogenase Acd"
                     /protein_id="HSQ13260.1"
                     /translation="MDFDLSDELIAVRDLACEFAEKEIAPTAAKDDKEKTFRGDLVRK
                     MGELGFYGTMIPENYGGNGLGFLAMVLITEEVARVHSAMRVAINMQIGPALTLLQFGS
                     EEQKKKFIPGLMSGETIGCFAITESDAGSDVAAMRTTATRSGDNYLLNGGKIWISNGP
                     VTNGGLVYAYTDRAQKHRGMSAFYTDWSEPGLTRKSLETMGAHCSPLGELSFDNFGIP
                     AANLLGSEGDGFKICMWQLNQTRLNCAAGALGVARAAKEAAVNYCNQRAQFGQKIGEF
                     QMNQDLIAQMIVHEEAARLLVYRAASLADQQKPNNLETCIGKYCAAEAANFAADAAMK
                     ILGAYGYSTEFPVERYYRDAKSYQIVEGSSNVQKMIIAQDALGYRKANRG"
     gene            complement(1211..>1518)
                     /locus_tag="VLM90_09585"
     CDS             complement(1211..>1518)
                     /locus_tag="VLM90_09585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ13261.1"
                     /translation="LLDEPTLHLDLNFQLQILSALKRLCVDKGITVITVLHDVNLLSL
                     FADKALLLSSGELRGFGPVAEVMDEKSITELLGVDMKAIVGETAGARYFVPRRPFNR"
BASE COUNT          348 a          392 c          475 g          303 t
ORIGIN      
        1 aataaccggc accatgtccc aggtgaggag gaggaacgat ggatttcgat ttgtcagacg
       61 agttgatcgc cgtgcgcgac ttggcgtgcg agtttgccga gaaggaaatc gcgccgacag
      121 cggcgaagga tgacaaggaa aaaacttttc gcggcgatct ggttcggaag atgggcgagc
      181 tggggttcta tggcacgatg attccagaaa actacggcgg caacggtctg ggatttctcg
      241 ctatggtgct gatcaccgaa gaggtagcgc gcgtgcatag tgccatgcgc gtcgcgatca
      301 atatgcagat cggtccggcg ttgacgctgc tgcaatttgg tagcgaagaa cagaaaaaga
      361 aattcattcc gggtttgatg tcgggagaaa ccatcggctg ttttgccata accgaatccg
      421 acgccggctc ggatgtcgcg gcgatgcgca cgacggcgac gcgcagcggc gataactatt
      481 tactcaatgg cggcaagatt tggatatcca acggcccggt gaccaacggc gggctggtat
      541 acgcctacac ggatagagcg caaaaacacc gtggcatgag cgccttttat accgactgga
      601 gcgagcccgg attgacgcgc aaatcattgg aaaccatggg cgcgcattgc tcgcctttgg
      661 gtgagttgag cttcgacaac tttggtattc cggcagcgaa tcttctcggt agcgaaggcg
      721 acggtttcaa aatctgcatg tggcagctca atcaaacccg gctcaactgc gccgccggcg
      781 cgttgggcgt ggcgcgcgcg gcgaaagagg ccgcggtcaa ttattgtaat cagcgcgcgc
      841 agtttggcca aaagatcggt gagtttcaga tgaatcaaga cttgattgcg cagatgatcg
      901 ttcacgaaga agcggcgcgg ctgctggttt accgagccgc gtcgctggcg gatcagcaaa
      961 aaccgaacaa tttggagact tgcatcggta agtactgcgc ggcggaggcc gccaacttcg
     1021 ccgccgacgc ggcgatgaag atcctcggcg cctacggcta ttccaccgag ttcccggtcg
     1081 agcgctatta ccgcgacgcc aagtcgtacc agatcgtcga aggctcgtcg aacgtgcaaa
     1141 agatgatcat cgcccaggac gcgctggggt atcgcaaggc gaatcgaggg taatagggaa
     1201 tgatgctggt ttagcgattg aatggtcgcc gtggcacgaa gtagcgggca cccgcggttt
     1261 cgccgacgat cgctttcatg tcgacgccga gaagttccgt aatgctcttt tcatccatca
     1321 cctcggcgac cgggccgaag ccgcgcagct caccgctgct gagcagcagc gctttgtcgg
     1381 cgaacagcga cagcagattc acgtcatgca ggacggtgat gacggtgatt cctttgtcca
     1441 cgcacagccg tttcagcgcc gagagaattt gcaattgaaa attgagatcc aggtgcagcg
     1501 tcggctcgtc aaggagta
//
LOCUS       DATIRS010000759         2251 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_843212, whole genome shotgun sequence.
ACCESSION   DATIRS010000759 DATIRS010000000
VERSION     DATIRS010000759.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2251)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2251)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2251
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_843212"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(167..928)
                     /locus_tag="VLM90_09590"
     CDS             complement(167..928)
                     /locus_tag="VLM90_09590"
                     /inference="COORDINATES: protein motif:HMM:NF024874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSQ13262.1"
                     /translation="MFALLVAPARVLAFCHELEVVQQGGIIRAALGSAPQVTIEWLGH
                     STFQITSSKGTRVLTDPHGAFDLPRPTLPQHIVTSSHRHGPHSSVHMAPGTPVIFHGL
                     TPSGEDWQKISTTIRDVSVYVVPAYHDKSRGMQRGKNAIFVFKIDDICIAHLGDLGHV
                     RTPDQLKMMGKIDILLVPIAGGYYTVTPSEARELTKLVNPKIAIPKHFWWEPAVQEYT
                     QGLTRVKMLSTPVLKISKPELPQPIETIVMPWGQR"
     gene            complement(1073..>2251)
                     /locus_tag="VLM90_09595"
     CDS             complement(1073..>2251)
                     /locus_tag="VLM90_09595"
                     /inference="COORDINATES: protein motif:HMM:NF018757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine amidotransferase"
                     /protein_id="HSQ13263.1"
                     /translation="DVPESQLSLIPFPIDDIFLEELKNFDVIFFDDFSHRAYFNPSYL
                     ERVRDFVRDGGGLAMFGGPRSFDAGGYGESALNEALPVELDGKGSFQTPAGVNIALTA
                     AGKAHPITRLLPDPKTNEEAWSKMPALTGMNQVRASRGETLITSSAESGGAPLLTIGR
                     FGKGRTLALMSDDAWRWNFIAVGNKETPQNHLKLVRQAVRWLAQEPSFEQVQLRPIAA
                     VQPGEKSQIKLKVLKDDFTPTRQASVQLRVFGPEGEPTVVAASADSEEGDYTGEFIPT
                     KEGTHRVEAEASLGGKVLGKDRGSFTAAFAYGETDDGLPRLDLLKQIAENSKGEYFSI
                     SDWNDKALEKIAAKLETIAPSQLVEQRQTQLWSTLWPFAIVLALLSVEWWMRRKWGLI
                     "
BASE COUNT          394 a          632 c          712 g          513 t
ORIGIN      
        1 aggcgctatc ggaagaggat gccgcagcgg tgctggcgcg caggactccc ggcagggacg
       61 atggctagaa tcctagtgtt cgatgtaggt tgggctagct gtgcgtcgag atgccgctag
      121 cctgtagttt ctttccgtcg agtgatggga agcagcatag gaatgcttac cgttgccccc
      181 aaggcatgac gatcgtttcg atcggctgcg gcagctccgg cttggagatc tttaagaccg
      241 gcgtgctgag cattttcacc cgcgtcaggc cctgggtgta ttcctgcacg gctggctccc
      301 accagaagtg tttggggatg gcgattttag gattgactag cttggtgagt tcgcgcgctt
      361 cgctcggcgt gacggtgtaa tagccgccgg cgatgggcac cagcaggatg tcgatcttgc
      421 ccatcatctt gagttggtcg ggggtccgca catggcccaa gtcgcccaaa tgggcgatgc
      481 agatgtcgtc gattttgaaa acgaagatgg cgttcttgcc gcgctgcatg ccgcggcttt
      541 tgtcgtgata ggcgggaacg acgtaaaccg acacgtcgcg gatggttgtc gaaatctttt
      601 gccagtcttc cccgctcggc gtgaggccgt ggaaaattac cggcgtgccg ggcgccatgt
      661 ggacgctgct atgcggaccg tggcggtggc tgctggtgac aatatgttgc ggcaaagtcg
      721 ggcgcggcag atcgaaggcg ccatgcggat cggtgaggac tcgggtgcct ttcgatgagg
      781 tgatttgaaa tgtcgaatgg cccagccatt cgatggtgac ctggggcgcg ctgcccagcg
      841 cggcgcgaat gattccgccc tgctgtacga cttcgagttc atggcagaat gcgagtacgc
      901 gagctggcgc caccagcagc gcaaacacaa ttgtgactcg gtagaggatt cgaatcattg
      961 tgggttggtc cgggtcattt gtaggggtaa tcctatgtga ttgcccttcc ggctggtggg
     1021 cggatacccg tcgacccggc tcaggacgcc ggtccgcccc gacaagttat ttttatatca
     1081 gtccccactt ccttctcatc caccattcga cgctgagcag cgccagcacg atggcgaagg
     1141 gccatagcgt gctccatagc tgggtttggc gctgctcgac cagctgcgac ggcgcgatgg
     1201 tttcgagctt ggcggcgatc ttttccagcg ctttgtcgtt ccagtcgctg atcgaaaagt
     1261 attcgccttt gctgttctcg gcgatctgtt tcagcagatc gaggcgcggc aggccgtcgt
     1321 cggtttcgcc gtaggcgaac gcggcggtga aactgccgcg atctttgccc agcactttgc
     1381 ctcccaagct tgcttccgct tcgacgcgat gggtgccttc tttggttgga atgaattcgc
     1441 cggtgtagtc gccttcctcg ctgtcggcgc tggcggcgac gaccgtcggt tcgccttcgg
     1501 ggccgaagac gcgcagttgc acggacgctt ggcgcgtcgg cgtgaagtca tctttcagca
     1561 ctttcaattt gatctggctt ttttcgcccg gttgcaccgc tgcgatggga cgcagctgca
     1621 cctgttcgaa ggacggctcc tgggcgagcc agcgcaccgc ttggcggaca agttttaaat
     1681 gattttgcgg tgtttcttta ttgccgacgg cgatgaagtt ccagcgccac gcgtcgtcgc
     1741 tcatgagcgc cagcgtgcgc cccttgccga agcggcctat ggtcaggagc ggcgcgccgc
     1801 cgctctcggc gctactggta attaaagtct cgccgcggga ggcacgcacc tggttcatgc
     1861 cggtaagcgc cggcatcttg ctccaggctt cttcgttggt cttaggatca ggcagcaatc
     1921 gggtgatcgg atgggcttta cccgccgcgg tcagcgcgat gttgaccccg gccggcgttt
     1981 gaaaactgcc tttgccgtcc aactccaccg gcaatgcttc gttcaacgcg ctctcgccgt
     2041 aaccgccggc gtcgaaggaa cgcgggccgc cgaacattgc caggccgccg ccgtcgcgaa
     2101 cgaaatcccg cacccgttcc aaataagacg ggttgaagta agcgcgatgg gagaagtcgt
     2161 cgaagaaaat cacatcgaag ttcttcaact cttcgagaaa aatatcgtcg atcggaaacg
     2221 gtattaagct caactggctt tccggcacat c
//
LOCUS       DATIRS010000760         1827 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_153886, whole genome shotgun sequence.
ACCESSION   DATIRS010000760 DATIRS010000000
VERSION     DATIRS010000760.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1827
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153886"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..543
                     /locus_tag="VLM90_09600"
     CDS             <1..543
                     /locus_tag="VLM90_09600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13264.1"
                     /translation="STFLYFQQAEIARKYFTDRGARTAFFARVDLWVNILTLGAQLFV
                     TAGTIKRIGVAFTLVLLPLLSIFGFGTLAWAPTIAVLVAFQVIRRAGNFAFARPTREV
                     LFTVVPREDKYKAKSFIDTVVYRLGDQVGAWSYAGLGALGLAMTGVSLVAVPISIVWL
                     VNSLWLGRKQKSLEAAAVAG"
     gene            complement(650..1186)
                     /locus_tag="VLM90_09605"
     CDS             complement(650..1186)
                     /locus_tag="VLM90_09605"
                     /inference="COORDINATES: protein motif:HMM:NF025116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HSQ13265.1"
                     /translation="MPDTNHLILTAVGPDRVGLVEKIAAFIARHDCNIEDSKMAVFCG
                     EFAVIVLITGDGNKLVKIGRDYREIESETGLTISIKTPAMRSPAESFLPYKLTASCMD
                     HPGIVYQISNVLSGMGVNIESMETKTYAAPISGTPIFQLEADLAVPTRTNIAELRERF
                     GEIQRQENIDIDLTAAKN"
     gene            complement(1390..>1827)
                     /locus_tag="VLM90_09610"
     CDS             complement(1390..>1827)
                     /locus_tag="VLM90_09610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13266.1"
                     /translation="LTFERWESAKKRPNFKAEDFIHKNSTQALEAAARAAATRLKLSH
                     QDTAALVQRYLGYTRELSGPGAKPVPNFLSIHGINDDTVTLKRCERSLPLFANLNPAP
                     HVRAVSLGAGVHSWGWSDDKLPQGIVPPVAKLWHDAIMNGFFL"
BASE COUNT          339 a          488 c          556 g          444 t
ORIGIN      
        1 tcgacctttc tttatttcca gcaggccgag atcgccagga aatacttcac cgaccgcggc
       61 gcgcgcacgg cgtttttcgc cagggtcgat ctgtgggtga atattttgac gcttggcgcg
      121 cagttgttcg ttaccgctgg aacgatcaaa cgcatcggcg ttgcgttcac cttggtgttg
      181 ctgccgctgt taagcatttt cggcttcggc accttggcct gggcgccgac gattgctgtg
      241 ctcgtggctt ttcaagtgat ccgccgcgcc ggcaattttg ccttcgcccg gccgacccgc
      301 gaggtgctgt tcaccgtcgt gccacgtgag gataagtata aggccaagag cttcatcgat
      361 accgtggtgt atcgcttagg cgatcaggtg ggcgcctggt cctatgccgg cttgggcgcg
      421 ctcggtttgg cgatgaccgg ggtttcgcta gtcgccgtgc cgatttcgat tgtttggctc
      481 gtcaacagcc tgtggctggg tagaaagcag aagagtcttg aggcggcagc tgtcgccgga
      541 tagttccaac gattccagag gttccaatcg ttccaacccg ctcgacggtc cgacgccctt
      601 ccgaaacgtt tggaaacctg gaacgtttgg aaccagtgga accgcggtgt taatttttcg
      661 ccgccgtcag atcgatatct atattctcct gccgctggat ctcgccgaaa cgctcgcgca
      721 gctcggcgat gttggttcgc gtcggtacgg ccaggtcggc ttcaagttgg aagatcggag
      781 tgccgctgat cggcgcggcg taggttttgg tttccatcga ttcgatattc acgcccatgc
      841 cgctcagcac gttactaatc tgataaacga tgcccggatg gtccatgcac gaggcggtga
      901 gtttgtaggg cagaaacgac tcggcggggc tgcgcattgc cggcgtcttg atcgagatgg
      961 tcaagccggt ttcgctttcg atctcgcgat aatcgcggcc gatttttacc agtttattgc
     1021 cgtcgccggt gatcaagacg atgacggcaa actcgccgca gaataccgcc atcttactgt
     1081 cctcgatgtt gcaatcatgg cgagcgatga acgcggcgat cttttccaca agaccgaccc
     1141 ggtccgggcc gacggcggtg agtatcagat gattggtgtc cggcatggat caagcttaat
     1201 gaatttgttc aaaccgttca aatcgttcaa accggtcaaa acgtctgatc gataaattct
     1261 gtctcaccac gaagatcacg aaggacacga aggattcgga tgattattat tccgaacttc
     1321 gtgctcttcg tgtccttcgt ggtgaaagcc atcttggtat cctcgcttgg aatctcccgg
     1381 tcgtctactt tagaggaaga agccattcat gatcgcgtcg tgccaaagtt tagcgactgg
     1441 cggcacgatg ccctgcggga gcttatcgtc gctccagccc cacgagtgaa cgccggcgcc
     1501 gagggagacg gcgcggacat ggggtgcggg attcaaattg gcgaacagcg gcagcgaacg
     1561 ttcgcagcgt ttgagcgtga cggtatcgtc gttgatgccg tggatcgaca gaaagttcgg
     1621 caccggtttg gcgccggggc ccgacaattc tctggtgtac ccgagataac gctggaccag
     1681 ggcggcggtg tcctggtgcg atagtttgag ccgagttgcg gcggcgcggg cggcggcttc
     1741 gagggcctgg gtcgaattct tgtgaataaa gtcttcggct ttgaagttgg gccgcttctt
     1801 ggcgctctcc cagcgttcaa atgtcag
//
LOCUS       DATIRS010000761         1653 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_55665, whole genome shotgun sequence.
ACCESSION   DATIRS010000761 DATIRS010000000
VERSION     DATIRS010000761.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55665"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..743
                     /locus_tag="VLM90_09615"
     CDS             <1..743
                     /locus_tag="VLM90_09615"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="dolichyl-phosphate beta-glucosyltransferase"
                     /protein_id="HSQ13267.1"
                     /translation="TPPGFYLSIVVPAYNEAARLPSTLQRIQEYLLRFSISAEIIVVL
                     DGPTDVTREIARAATRDVPQLKILDRKINRGKGFTVREGMLAASGQIRLFCDADNSTD
                     IAHFDKMKPLFDQGYDIVIASRSAKDAPEALQVVSQAWYKRALGRLGNRIVQTAAVPG
                     IWDTQCGFKAFRAEAAERIFAQTTIERWGFDIEVLALAQRLGYKIGIVSARWLNDDRS
                     NVKLSDYLHVLGDTFTVRRNLLSGKYRL"
     gene            complement(772..1491)
                     /locus_tag="VLM90_09620"
     CDS             complement(772..1491)
                     /locus_tag="VLM90_09620"
                     /inference="COORDINATES: protein motif:HMM:NF014582.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HSQ13268.1"
                     /translation="MSALAIYLPTVVFISLLGGFLPLMRALSQRALALLLSFSAGVLL
                     GAVFFHMLPETGKVLGESLGLPVLAGFLLIFVMERFVFVHACEEHDCDVHQMGIPAFL
                     GISLHSLLDGIALGAGLILPQLGPVVLLAVIIHKMPDSMSISSILLSAGWERHKVGKL
                     NLLFSLTTPIGALLAFFCFRTLSPENVAVAIGLSAGTFLAIATADILPHVHRIEQRNP
                     LTLVFLAIGLAVSWMGTLLAH"
BASE COUNT          390 a          456 c          505 g          302 t
ORIGIN      
        1 tgacaccacc gggcttttat ctttccattg tcgttccggc gtacaacgag gcggcaaggc
       61 tgccgagcac cctgcaacgt atccaggaat atttgttgcg gttttcgatc agcgctgaga
      121 ttatcgtagt tctcgatggg ccaaccgatg tgacccgcga aatcgcgcgc gcggcgacac
      181 gcgatgtgcc ccaactcaag atccttgatc gcaaaatcaa ccgcggcaaa ggctttacgg
      241 tcagggaagg catgctcgcc gcctcgggac agattcggct gttttgcgat gccgacaatt
      301 ccactgatat cgctcacttt gacaaaatga agccgttgtt cgaccagggc tacgatattg
      361 tcatcgcgtc gcgcagcgct aaggacgcac ccgaggcgct gcaagtggtt tcccaggcct
      421 ggtacaagcg cgctcttggc cggctcggta atcggattgt gcagaccgcc gcggtgccgg
      481 gaatctggga tacccagtgc ggctttaagg cctttcgcgc cgaagcggcg gagcggatct
      541 tcgcacagac gaccattgaa cgctggggat tcgatatcga agtcttggcg ctggcgcaac
      601 ggctgggcta caagatcggc atcgtttcgg cgcgctggct caacgacgac cgcagcaatg
      661 taaaattgtc agactatctc catgttctcg gcgacacctt caccgtgcgg cgcaatctgt
      721 taagcggaaa gtatcggttg tgaggatcgc gtgagactcg ccgcaaccgg ctcagtgggc
      781 caacagcgtg cccatccaac tgaccgctag gccaatggcg agaaaaacaa gcgtcagcgg
      841 attgcgctgc tcgatgcggt gcacatgggg caatatgtcg gcggtggcga tggccaggaa
      901 agtgccggcg gacaagccga tggcgacggc gacattctct ggagagagcg tgcggaagca
      961 gaaaaaggcc agcagcgcgc cgatgggggt ggtgagggaa aacagcagat tgagcttgcc
     1021 gactttatgg cgctcccagc cggcggagag caggatcgac gagatcgaca tgctgtcggg
     1081 catcttgtga atgatcacgg cgagcaacac cacggggccg agctgcggca gaatcagacc
     1141 ggcgccgagc gcgatgccgt cgagcaaact gtgcaacgag atgccgagga acgctggaat
     1201 acccatctga tggacgtcgc agtcgtgttc ttcgcaggca tggacgaaga caaaccgttc
     1261 catgacgaag atcagcagga aaccggccag caccggcaag ccgaggcttt ctcccagtac
     1321 ttttccagtc tcgggcaaca tgtgaaaaaa caccgcgccg agcaagaccc cggcgctaaa
     1381 actgagcagc agggcgaggg cgcgttgcga caacgcccgc atcaatggca ggaagcctcc
     1441 gagcagcgag atgaaaacca ccgtcggcaa gtatatggct agggcagaca tggtgaataa
     1501 cgccgaaagc tagcataggc ccggatgcgt cgcaatcggc gggtaatcgg catacctcca
     1561 cgcaagatag ccggtcgttg tgaccaattg gttgcgagcc gagtctatcg atggtaacga
     1621 tttttccatg caaaatctct catattcaaa aaa
//
LOCUS       DATIRS010000762         2277 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_351335, whole genome shotgun sequence.
ACCESSION   DATIRS010000762 DATIRS010000000
VERSION     DATIRS010000762.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2277
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_351335"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1068
                     /locus_tag="VLM90_09625"
     CDS             <1..1068
                     /locus_tag="VLM90_09625"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: protein motif:HMM:NF003211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase"
                     /protein_id="HSQ13269.1"
                     /translation="PQKPSKQPGEHDACELTEARMFTLMFKTFMGPVEDDAAVAYLRP
                     ETAQGIFVNFENVQQSMRLKLPFGIAQIGKSFRNEITPGNFTFRTREFEQMEIEFFVM
                     PGTDEDWHQRWLDERFAWYPKYGIRKENLRLREHEKDELAHYAKRTADIEYLFPMGWS
                     ELEGIANRTDFDLKQHAQFSGKTLEYFDEESKQKVVPFVIEPSAGSDRGTLAFLVDAY
                     GEEEVKGEKRVVLNFHPELAPIKIAVLPLLKKNPRIVETAHKLCADLRKRWHSVYDDT
                     ASIGRLYRRQDEVGTPFCVTVDVQTVGDDKSAADDKVTIRDRDNMQQIRVPLASLTAV
                     MEKLMDGEWAEIHRQHAVTRG"
     gene            1194..>2277
                     /locus_tag="VLM90_09630"
     CDS             1194..>2277
                     /locus_tag="VLM90_09630"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HSQ13270.1"
                     /translation="MRIFSSLTHPDREPKDREILRYYHRVKFLVDRYRRLLLIGVLSL
                     IATDLAGLALPWLIKGGIDMAVRAKDGNASLITYPLLILGAASLQGFFRFCWRINIHG
                     FSRRCEADLRDVVFAHLQKLPLSYFQYNKIGDLMSRLTNDIHAVRELMGFGSLAIVDA
                     VVVIVFSLALMIAIDPWLTLWSMMAMPFIPVVVRFFGRHIFRWSRDTQDQLSLMSAYT
                     LENFSGIRVVQAYAQEENQIRGFERISSEYRRKTMWLATLWGIFWPLMQVHAGIAATI
                     VLWLGGRQVLAGTMTLGEFAAFNGYLAMLTWPLMAIGYTANQYQRGTAALSRIAEVLD
                     TPVGARYASLAGSAPAEVLRGDIELRN"
BASE COUNT          455 a          664 c          664 g          494 t
ORIGIN      
        1 ccgcagaagc cgtcgaaaca gcccggggag catgacgcgt gcgagcttac cgaagcgcgc
       61 atgttcactt tgatgttcaa gaccttcatg gggccggtgg aggacgatgc cgcggtcgct
      121 tatttgcggc cggagaccgc ccaggggatt ttcgtcaact tcgagaatgt ccagcaatcg
      181 atgcgcttga agctgccctt tggcatcgcc cagatcggca agtccttccg taacgagatc
      241 acgccgggca attttacttt tcgcacccgt gaattcgagc aaatggaaat cgagttcttc
      301 gtcatgcccg gcacggacga ggattggcac cagcgctggc tcgacgagcg cttcgcctgg
      361 tatccgaaat acggcatccg caaagagaac ctgcgcctgc gcgagcatga gaaagacgag
      421 ctggcgcact acgccaaacg caccgccgac atcgaatatc tgttcccgat gggttggagt
      481 gaactcgaag ggatcgccaa tcgaaccgac ttcgatttga agcagcatgc tcagttcagc
      541 ggcaaaacgc tggagtactt cgacgaagag agcaagcaaa aggtggttcc cttcgtcatc
      601 gagccgtcgg ccggctccga ccgcggcacg ttggcgtttc tcgtcgacgc ctatggcgag
      661 gaagaagtga agggcgagaa gcgcgtggtg ctgaactttc accccgagct ggcgccgatc
      721 aagatcgcgg tcctgccgct gttgaagaaa aacccgcgca tcgtcgagac cgcgcataag
      781 ctgtgcgccg atctgcgcaa gcgttggcac tcggtctacg acgacaccgc gtcgatcgga
      841 cgactctacc gccgccagga cgaagtcggc accccgttct gtgtcaccgt cgatgtgcaa
      901 accgtcggcg atgacaagtc cgcggcggat gacaaggtga cgattcgcga ccgcgataac
      961 atgcagcaga ttcgcgtgcc gctcgcctcg ctcaccgccg taatggaaaa attgatggac
     1021 ggggaatggg cggagattca tcgccagcat gctgtgacgc gcggctaaga tctaagaacg
     1081 ttgaatttca atcaagatcg atagacaccc ttcaccacga aggacacgga gagcacgaag
     1141 ttcggagttt aaactatctt aacccttcgt gtccttcgtg ctcttcgtgg tgagtgcgaa
     1201 ttttttcatc gcttacgcac cctgaccgcg aaccaaagga tagagagatt ctgcgctatt
     1261 accaccgggt caagtttctc gttgaccgct accgccggct gctccttatc ggcgttcttt
     1321 ccctgatcgc caccgatctt gccggtcttg ccctgccatg gttgatcaaa ggcggcatcg
     1381 acatggcggt gcgcgccaag gacggcaacg cttcgctcat cacttatccc ctgctgattc
     1441 tcggcgcggc atcgctgcaa ggcttttttc gcttctgctg gcgcattaac attcacggct
     1501 tctcgcgccg ttgcgaggcc gacctgcgcg atgtcgtgtt cgcccatctg caaaagctgc
     1561 cgctcagcta ttttcaatac aacaagatcg gcgacctgat gtcgcgcctg accaatgata
     1621 tccacgccgt gcgcgagctc atgggtttcg gttcgctggc gatcgtcgat gcggtggtgg
     1681 tcattgtttt cagtttggcg ctgatgatcg ccatcgatcc ttggctgacc ctgtggtcga
     1741 tgatggcgat gccgtttatt cccgtggtcg tgcgtttctt cggccggcat attttccgct
     1801 ggtcgcgcga cacccaggat caactgagcc tgatgagcgc ctatacgctg gaaaattttt
     1861 ccggcatccg tgtcgttcaa gcttacgccc aagaggaaaa tcaaattcgt ggttttgaac
     1921 ggatcagttc ggagtaccgg cgcaaaacca tgtggttggc gacgctgtgg gggattttct
     1981 ggccgcttat gcaggttcac gccggcatcg ccgccaccat cgttctttgg ctcggcgggc
     2041 gccaagtgct ggcgggcacg atgaccttgg gggaattcgc cgctttcaat ggttatctag
     2101 cgatgctcac ctggccgctc atggcgatag gttacaccgc caatcaatac cagcgcggca
     2161 cggcggcgct cagccgcatc gccgaggtgc tggatacgcc ggtgggggcg cgctatgcca
     2221 gcctcgccgg ttccgcgccg gcagaggtcc tgcgcggcga catcgaattg cgcaatt
//
LOCUS       DATIRS010000763         2580 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1728725, whole genome shotgun sequence.
ACCESSION   DATIRS010000763 DATIRS010000000
VERSION     DATIRS010000763.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2580
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1728725"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            217..855
                     /locus_tag="VLM90_09635"
     CDS             217..855
                     /locus_tag="VLM90_09635"
                     /inference="COORDINATES: protein motif:HMM:NF020905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urea carboxylase-associated family protein"
                     /protein_id="HSQ13271.1"
                     /translation="MSILKTQVVAKNSGAAFEVLKGQRIRIAGRSIVDFVAFNLRDLT
                     ERFDQARTKTNQVKIFISTGDVLYSKRNSPMMTIVADTFAEGRHDLQKGMCSRKRFEM
                     VAQGQSKRLFAEGVDINPKTAEEIPTHGCWENLSGAVKPWNITPDDVPSPFNIFQCMR
                     IDPDSGVMYDTMVRPKDEAHVDFRAEMDLLVAASACPESGRGQAIRVEIYDA"
     gene            983..2155
                     /locus_tag="VLM90_09640"
     CDS             983..2155
                     /locus_tag="VLM90_09640"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF012678.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HSQ13272.1"
                     /translation="MAGTTFTFNNPHVERVISGPGSLGKLAEEIERLGGTRALVLISP
                     SVAKTFLLDKVKAGLGGKCVAVFDQVKPHSPTESIEKAVELAQGAKIDILVSVGGGSA
                     IDTGKGVAALLAEGGALPRFGVRFTPPNKKEVPLMPAPKIPHIAIPTTLSGGEYSYSA
                     GITEGGKKFIVADPKLAPKTVLLDPEAAATAPGRLLASSGMNSLAHCVEAVYSTETQP
                     LTEAYCLTGIGLLARYLPRAVADSSDLEALSHFQVAACLSGMGVYSAWTGIHHAIVHV
                     IGGRYKAPHAEIHALMLPYGMRWNLDVAQRHYLRMAREIGIEAANESELAAAVPEYVY
                     GMNQKMGLPLKLRDLGVPRDGLKQLSVDTLGDYSIHTNPKPVRNAEQVLEVLEAAW"
     gene            2262..>2580
                     /locus_tag="VLM90_09645"
     CDS             2262..>2580
                     /locus_tag="VLM90_09645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13273.1"
                     /translation="MTSQEAAAFANQFANDDEIDKLLVDLLRAPSPQTDLQEADPNLK
                     KLVAEFVAPRLKMLTGSAAALDGMGNFLWQSGANAGEPGLLLMGYAMTFPATGMKEPF
                     SGAI"
BASE COUNT          549 a          675 c          800 g          556 t
ORIGIN      
        1 gaacgacttc agatttccca tgcgtttgcc tttgatcgtc acttcgatga gtatcccggt
       61 attcggcggg tcccaagaca aacctgaatt atcgcttacg gaactcacaa gctagttgtc
      121 agtaaccaag taatcaattc cattttggcg gacgcccgaa ttgaaatgat ccgagcgttc
      181 cgtttggacg ctgcatattt aattgaggaa acgttgatgt ctatcttgaa gactcaggtc
      241 gtggcgaaaa actcgggcgc ggcgtttgaa gtgttgaaag ggcagcggat acggatcgcg
      301 gggcggagta ttgtcgactt cgtggctttt aacctgcgcg atttgaccga gcgtttcgat
      361 caggcacgca ccaagaccaa tcaagtaaag atctttatca gcaccggcga cgttctctat
      421 tcaaaaagaa acagtccgat gatgactatc gttgccgata cgtttgccga ggggcgccat
      481 gacttgcaga agggcatgtg cagccgcaag cgattcgaga tggtcgcgca gggccagtcg
      541 aaacggctat tcgccgaagg tgtcgatatc aatcccaaga cggcggagga gattccgacc
      601 catggttgtt gggagaattt gagcggggcc gttaagccgt ggaatattac gccggacgat
      661 gtgccgagtc ccttcaatat ttttcagtgc atgcgcatcg accccgacag cggcgtgatg
      721 tacgacacca tggtccggcc caaggatgaa gcccatgtgg attttcgcgc cgagatggat
      781 ttgctggtgg ccgccagtgc ttgtccggag tcgggccgcg ggcaggcgat ccgggtggag
      841 atttacgatg cctaaccgga gtctttcacc acgaagacgc gaaggacacg aaggtaagaa
      901 ttaatagatt ccgaacttcg tgctcttcgt gccttcgtgg tgaacgggaa ttcgcggtct
      961 gagcgatcgg tgggaaggcg aaatggcagg aacaactttt acttttaaca atccccatgt
     1021 cgagcgggtg atctcgggac cgggctcgtt gggcaagttg gcggaggaaa ttgaacgcct
     1081 tggcggcaca cgggcgttgg tgttgatctc gccgtcggtg gcgaagacct ttctcttgga
     1141 caaggttaaa gctgggctcg gtggtaaatg cgtggcggtg ttcgatcagg tgaagccgca
     1201 ttcgccgacg gagtcgatcg aaaaggcggt ggagctggcg cagggtgcga agatcgacat
     1261 tctggtcagc gtcggcggtg gcagcgccat cgacaccggc aagggtgtgg cggcgctgtt
     1321 ggccgagggc ggtgcgctgc cgcgtttcgg tgtgcggttc acgccgccga acaaaaaaga
     1381 agtgccgctc atgccggcgc cgaaaatccc tcacatcgcg attccgacca ctctctccgg
     1441 cggcgagtac agctactccg ccggcattac cgagggcggc aagaaattca tcgtcgccga
     1501 tcccaagctg gcgccgaaga cggtgctgct cgatcccgaa gcggcggcga ccgcgcccgg
     1561 ccgtttactg gcgtcgtccg gcatgaattc tctggcgcat tgcgtcgaag cggtttactc
     1621 cactgagacg caacccttga cggaggctta ttgtcttacc ggtatcggtt tgctcgcgcg
     1681 ttatctgccg cgggcggtgg cggattcatc ggatctcgaa gcgctcagcc atttccaggt
     1741 ggcggcatgt ttgtccggca tgggtgttta tagcgcctgg acgggcatcc atcacgccat
     1801 cgtccatgtc atcggcgggc gctacaaagc cccgcacgcg gaaattcatg cattgatgtt
     1861 gccctacggc atgcgctgga atttggatgt ggcgcagcgc cattacttgc ggatggcgcg
     1921 ggagatcggc atcgaagccg cgaacgaaag tgaattggcc gccgccgtgc cggaatacgt
     1981 ctacggcatg aatcaaaaga tgggcctgcc gctcaaactg cgcgatctcg gcgtgccgcg
     2041 cgatggcttg aagcagttat cagtggatac gttgggcgat tacagcattc acaccaatcc
     2101 caaaccggtg cgcaacgcgg aacaggtgct tgaggtgctt gaagcggcgt ggtgatcaaa
     2161 tccatttctc ccgcaaaggc gcaaagacgc taaggttcgg aatttgattg tgaattgtag
     2221 gggcgactgg cggtcgccca tccggcccaa gtctaataca catgacttct caagaagctg
     2281 ctgccttcgc gaatcaattt gccaatgatg acgagatcga caaactgctc gtcgacctgc
     2341 tccgcgcgcc gtcgccccag acggatcttc aggaagccga tcctaattta aaaaaacttg
     2401 tcgccgaatt cgtggcgccg cggttgaaaa tgctgaccgg aagcgcagcg gcgctagacg
     2461 gcatgggaaa tttcctgtgg cagtctggcg cgaatgccgg cgagccgggc ttgctgctca
     2521 tgggttatgc tatgacattc ccggcgaccg gaatgaagga gccgttctcg ggcgcgatcg
//
LOCUS       DATIRS010000764         3593 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1923686, whole genome shotgun sequence.
ACCESSION   DATIRS010000764 DATIRS010000000
VERSION     DATIRS010000764.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3593
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1923686"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..906)
                     /locus_tag="VLM90_09650"
     CDS             complement(<1..906)
                     /locus_tag="VLM90_09650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13274.1"
                     /translation="MNPKLWSRVFGTRRLLWLGFGVLTLVMVSIGIIAIVRVRSVASS
                     FEKQTKVAKPRSATARELELNVLDYSLGVHQYLRGDDLARQRTAKYAANLALQLDGYT
                     ALAETARQREMAARLRTGWQEVYALGEALMAARTANREEVARFTETAVRLERFLDTEL
                     QPDAEIIFNALSAETHGSLQKSEIVTLALLFLGLTIALLTGWAVVRAVLAGEAQLRDS
                     EERLTRLNTTLEQKVDEHTRELRELNADLDQRVVQRTRALGDSQKKLRAFVEQLTHAE
                     EQERHRLATELHDYLGQLLALSQINL"
     gene            complement(927..2447)
                     /locus_tag="VLM90_09655"
     CDS             complement(927..2447)
                     /locus_tag="VLM90_09655"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSQ13275.1"
                     /translation="MGTTIPMLMGDGLRRNGWKFPIKIAARDKFRQTTYGELNARVNR
                     LANGLLAIGVKRGDGVALSVGNRIEHLEIIFATAKIGALAIPLDVKWKALELASVVAA
                     MEPRFIILQEDCVGEFAKAKELKDLSSIKVISLSPDLNYSGLLDGQSADEPVVEVSED
                     DPFAVLLTSGTTGFPKGCLATQRTFVFHCINNAIEKGLGAHDKAILSSPIYFNAGRSF
                     TLGIIYFGGTMILHERFDADEVLKTIEREKVTYVGAVPVMCERMLHVLESKKYDTSSL
                     RCLAITGGKVHPAVLESLKKNLTPNIYRTYASTDSGQMAISKPGDAAEKANSAGRPVW
                     CVDLRIVDDAGKPVQVGEVGEIICQSPLATHGYYKNPEATDASFRDGWFYTGDLGHFD
                     EEGYLFVSGRKKDMVKSGGISIYPLEIESVIYSHPDILEAAVIGVPDPQWGEALKAVI
                     VLKPGAKLDGVELLSFCKERLSAYKVPKSVDFVESLPHTEVGKVNKMQVREMFLRP"
     gene            complement(2575..3393)
                     /locus_tag="VLM90_09660"
     CDS             complement(2575..3393)
                     /locus_tag="VLM90_09660"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HSQ13276.1"
                     /translation="MADDKILYEVKDKIAWITLNRPESLNAVNRDMVKAIVGYCRAAE
                     DDAHVPIVIFKANGERAFSVGGDIKDRARLNAAEAAGPLPSPLVARQEKYNAIPGTPA
                     PAIAAMNKITIALLHGYTVGTGLLMSMACDIRIAAEGARLGVSEVRLGFMAGSGGTQR
                     LPRLVGLPKALEICLSGELYDAAECHRIGLVNQVVPYDQLIPAGEKMAQSFLKGAPLA
                     LRYIKEAIYKGLDMPFEQGLRYESDLQSMVMQTEDAKEGSKAFVEKRPANWKGR"
BASE COUNT          742 a         1133 c          935 g          783 t
ORIGIN      
        1 gagattgatt tgactgagag ccagcaattg ccccaggtag tcgtgcaact cggtcgccaa
       61 ccgatgccgc tcctgctctt cggcgtgggt caattgctcg acgaaagcac ggagcttctt
      121 ttgcgaatcg cccagcgctc gggtccgttg cactacccgt tgatcgagat cggcgttgag
      181 ctcgcgcaac tcgcgcgtgt gctcgtccac cttctgctcc aacgtcgtat tgagccgggt
      241 cagccgctcc tcgctgtcgc gcagttgagc ctcgcccgcg agcaccgcgc gcaccaccgc
      301 ccagcccgtt aacagcgcga tcgtcagtcc aagaaacagc agagccaacg taacgatctc
      361 cgatttctgc aggctgccat gagtttcggc actgagtgcg ttaaagatga tttccgcgtc
      421 cggctgcaac tcggtgtcca aaaaccgctc cagccgtaca gctgtttccg tgaaccgtgc
      481 cacctcctcg cgattcgccg tgcgcgccgc catcagcgcc tcgcccaacg cgtaaacctc
      541 ctgccagccg gtccgtagcc gcgccgccat ttcccgttgc cgcgcggttt cggccaacgc
      601 cgtataccca tcgagctgca acgccaaatt cgctgcatac ttggccgtcc tttggcgcgc
      661 gagatcgtcg cccctgaggt attgatgcac gcccaaagaa tagtcgagga cgttaagttc
      721 caattcccgc gcggtcgcgc tgcgcggttt cgcgaccttg gtttgttttt cgaaactaga
      781 agcgaccgag cgaactcgaa cgatagcgat gatgccgatc gacaccatta ccaatgtcag
      841 cacgccaaag ccgagccaga gcagccgcct tgtgccgaaa acgcgtgacc aaagtttcgg
      901 attcaagcaa actccatgag tttagattac ggccgcaaga acatttcgcg tacctgcatc
      961 ttattcacct tgcctacttc cgtgtgtggc agcgactcga cgaaatccac cgacttcggc
     1021 actttgtacg ccgacaaacg ctctttgcaa aaactcaata actcgacacc gtccagttta
     1081 gcaccgggct tgagcacgat caccgctttc aatgcctcgc cccactgcgg atcgggcacg
     1141 ccgatgacgg cggcttcgag aatatcgggg tgactgtaaa tcacactctc gatctccagt
     1201 ggatatatgc tgatgccgcc gctcttcacc atgtcctttt ttcggcccga cacgaacaaa
     1261 tagccttctt cgtcgaagtg gccgagatcg ccggtgtaaa accagccgtc tcggaatgaa
     1321 gcgtcggtgg cctcaggatt tttgtaatag ccgtgagtcg ccagcggact ctggcagatg
     1381 atctcgccga cctcgccgac ttgcaccggc ttgccggcat cgtcaacgat gcgcagatcg
     1441 acgcaccata ccggccggcc cgctgaattc gctttttctg ccgcatcacc gggtttcgaa
     1501 attgccattt gccccgaatc agtcgatgca taggtccgat agatattcgg cgtaagattt
     1561 ttcttgagtg attcaagcac ggcgggatga accttgccgc cggttatcgc caaacagcgc
     1621 agcgagctgg tgtcgtattt cttcgactcc agcacatgca acatacgctc gcacatcacc
     1681 ggcaccgcgc cgacgtaagt gaccttttca cgctcgatcg tctttaatac ttcgtcggcg
     1741 tcaaaacgct catgcaaaat catcgtgccg ccgaagtaga taatccccag ggtaaacgac
     1801 cgcccggcgt tgaaatagat cggcgacgac aagatcgcct tgtcgtgagc gccaagcccc
     1861 ttttcgatgg cgttgttgat gcagtgaaag acaaacgtcc gctgcgtcgc caggcaacct
     1921 ttggggaaac ccgtggtacc cgaagtaagc aaaacggcaa acggatcgtc ttcgctgacc
     1981 tcgaccaccg gctcgtcggc gctctggccg tcgagcaagc cgctataatt caagtcaggc
     2041 gaaagcgaaa tcactttgat cgaactaaga tctttcaact ccttagcctt ggcgaactcg
     2101 ccgacgcagt cctcttggag aatgatgaaa cgcggctcca tagcggcgac tacggacgcc
     2161 agctccaacg ccttccattt cacatcgagc gggatcgcca gggcgccgat cttggcggtg
     2221 gcgaaaataa tctccagatg ctcgatccga ttgcccaccg acaacgccac gccgtcgccg
     2281 cgcttcacgc cgatggcgag caagccattg gcgagccggt tcacccgcgc attgagctcg
     2341 ccataggtcg tttggcgaaa cttatcccgc gccgcgattt tgatcggaaa cttccagccg
     2401 ttccggcgca agccgtcgcc cattaacatt ggaatggttg tgcccataga taaatctttg
     2461 ctaaccgttc aaagttcaag gttcaaggtt caaggtcgga aaaatcaaaa gcctgcgatt
     2521 ttcaccgaga cactccgacg ttgaaccttt gaacccttga accttgaacg gaagttatct
     2581 ccccttccag ttcgccggcc gcttttcgac aaacgccttg gacccttcct tggcgtcttc
     2641 ggtctgcatc accatgcttt gtaagtcgga ctcgtagcgc aggccttgct cgaatggcat
     2701 gtcgagcccc ttgtagatcg cttctttaat gtaacgcagc gccagcggcg cgcctttgag
     2761 aaacgactgg gccatctttt cgccggcggg gattagctgg tcatagggca ccacttgatt
     2821 gaccaggccg atacggtgac actcggcggc gtcgtacaat tcgccagaaa ggcaaatttc
     2881 cagcgctttg ggcagcccga ccagccgtgg caaccgctgg gtgccgccgg aaccggccat
     2941 gaaaccgagc cgcacttcac tgacgccgag ccgcgcccct tcggcggcga tgcgaatgtc
     3001 gcaagccatg ctcatcagca atcccgtgcc gacggtgtag ccatgcagca acgcaatggt
     3061 gattttattc atcgccgcga tcgccggcgc cggcgtgccg gggatcgcgt tgtacttctc
     3121 ctggcgcgct accagcggcg acggcagcgg cccagccgcc tcggcggcat taagccgcgc
     3181 ccggtccttg atgtcgccgc caacggaaaa cgcccgctcg ccgttggcct tgaagatcac
     3241 gattggcaca tgggcatcgt cctcagcggc gcggcaatag ccgacaatcg ccttaaccat
     3301 gtcgcggttc actgcgttca acgactccgg ccgattgagg gtgatccacg cgatcttgtc
     3361 tttcacttcg tagagaattt tatcgtctgc cattctttcc tccattttgg attttagtct
     3421 gcggggccga ttgtcgaccc actaccattg caacttgcct tcttcagcga atcaccttat
     3481 ccgcccgata aagcagcgac tgcggaatcg tcacgccgat ctgtttcgcc gtcttgagat
     3541 taaacaccag ctcaaacttt gtcggctgct ccactggcag atcggcgggt ttg
//
LOCUS       DATIRS010000765         2825 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_351506, whole genome shotgun sequence.
ACCESSION   DATIRS010000765 DATIRS010000000
VERSION     DATIRS010000765.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2825
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_351506"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..659
                     /locus_tag="VLM90_09665"
     CDS             <1..659
                     /locus_tag="VLM90_09665"
                     /inference="COORDINATES: protein motif:HMM:NF015113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="His/Gly/Thr/Pro-type tRNA ligase C-terminal
                     domain-containing protein"
                     /protein_id="HSQ13277.1"
                     /translation="AVTGANEVNFHYIDIDQERDFTPSAFADLRLAVAGDPCPRCESG
                     KLQTHRGIEVGQIFYLGTKYSEKMGATYLDAEGREQAIEMGCYGIGISRMVAAAVEQN
                     HDANGIIWPLSIAPFQVLVLPINYKEEKLRDAAEKLYSELQRAGVEVMLDDRDERAGV
                     KFKDADLIGIPLRVTIGAKALDKGCIELRNRRNGKTDEVALGEAVKSIQTIIAQAVQG
                     "
     gene            663..1418
                     /gene="pyrF"
                     /locus_tag="VLM90_09670"
     CDS             663..1418
                     /gene="pyrF"
                     /locus_tag="VLM90_09670"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF001273.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0044205 - 'de novo' UMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HSQ13278.1"
                     /translation="MTSKLELVRKHGSMRERLIVALDVDDLEQAAQLVRQLAGEVGMF
                     KIGKQLFTHAGPQAVRQIQELGGEIFLDLKFHDIPNTVAKAAIEATRLGVKMFNVHAS
                     GSLEMMRLTAKEVRRVCRQQKLRKPIMLAVTVLTSLNQDDLQRVGVERKVADQVVRLA
                     LLTKEAGMDGVVASPHEVADIREACGRRFVIVTPGIRPSDGNRNDQQRVMTPQNAVRG
                     GVDYIVVGRPIIEAKDPVAAARAIVADMQLGAK"
     gene            complement(1498..2292)
                     /gene="thiD"
                     /locus_tag="VLM90_09675"
     CDS             complement(1498..2292)
                     /gene="thiD"
                     /locus_tag="VLM90_09675"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HSQ13279.1"
                     /translation="MTIRKALTIAGSDSGAGAGIQADLKTFAAHGVYGTSAITAITAQ
                     NTIGVTAVLAVNAKLVGAQIDAIIADIGAHAVKTGMLVNAAIIDLVAKKIRQHRLKHI
                     VVDPVMVATSGDLLIEKSAVAALRSKLIPLATVVTPNIPEAEVLTGMKLRGAEETKEA
                     AKRIVTMGAKTVLIKGGHLKGSATDLFYDGKKFTALNAPRIVTKNTHGTGCTLSAAIA
                     ANLAKGQDIVAAVTNAKSYITDALRHSYRIGSGHSPVHHFYRYWKA"
     gene            complement(2289..>2825)
                     /locus_tag="VLM90_09680"
     CDS             complement(2289..>2825)
                     /locus_tag="VLM90_09680"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ13280.1"
                     /translation="PKWKGKLAMDNESYDWLAAMLDHYGDAEGRRMAEALGKQEPSFR
                     RGTTLVGQLVAAGEFPIMVDGSNHLAYDLKKKGAPIEYIFPEPFIPVMIPQGFWVAAR
                     PPHPHGAALFVDFMLAKKAQEIMANQGRWVSRKDVKYQVDPGPRKQQVVSHEKWGERT
                     AELVQLYNRLIMRDAKSS"
BASE COUNT          557 a          822 c          864 g          582 t
ORIGIN      
        1 ccgcggttac cggcgccaac gaagttaatt tccattatat cgatatcgat caggagcgcg
       61 acttcacgcc gagtgcgttc gccgacttgc gccttgccgt ggcgggcgat ccttgtccgc
      121 gctgtgagtc gggcaagctg cagacccatc gcggcattga agtcggccaa attttttatc
      181 tcggcaccaa gtacagcgag aagatgggcg cgacctatct cgacgccgaa ggccgtgagc
      241 aggccatcga gatgggctgt tatggcatcg gcatcagccg catggtcgct gccgcggtcg
      301 agcagaacca cgatgccaac ggcatcatct ggccgttgtc cattgcgccg tttcaagtgc
      361 tcgtcctgcc gatcaattac aaagaagaaa aactgcgcga tgccgccgag aaactttatt
      421 cagagttgca gcgcgccggc gttgaagtga tgctcgacga tcgcgatgag cgcgccgggg
      481 ttaagtttaa agacgccgac ctgatcggca tcccgctgcg cgtcaccatc ggcgccaagg
      541 ccctagacaa aggctgtatc gagctgcgta accgacgcaa cggcaagacc gacgaagtgg
      601 cgctcggcga ggcggtaaaa tccattcaaa ccatcatcgc ccaggcggtc cagggataag
      661 ccatgacctc gaagctcgag ctggtacgta aacatggttc catgcgcgag cgattgatcg
      721 tcgccctcga cgtcgatgac ttggaacagg ccgcccagtt agtgcgccag ctcgccggcg
      781 aagtcggcat gttcaaaatc ggcaagcagc tcttcaccca tgccgggccg caggcggtgc
      841 ggcagattca agagctgggc ggcgagatct ttctcgacct caaattccac gacattccca
      901 atacggtcgc gaaagcggcc atcgaagcga cccggctcgg cgtgaaaatg ttcaacgtcc
      961 acgcctcggg cagcttggag atgatgcgcc tgaccgccaa ggaagtaaga cgggtgtgcc
     1021 ggcagcaaaa gctgcgcaag ccgatcatgc tggcggtcac cgtgctgacg agcttgaacc
     1081 aagacgatct gcagcgcgtc ggcgtcgagc gcaaggtcgc cgatcaggtg gtgcgtttag
     1141 ctctgcttac caaggaagcg gggatggatg gtgtagtcgc ttcgcctcat gaagtggcgg
     1201 atatccgcga ggcctgcggc cggcgctttg tcatcgtcac gccggggatt cgcccgtcag
     1261 atggcaatcg caacgaccaa cagcgcgtca tgacaccgca aaatgccgtg cgcggcggcg
     1321 tcgactacat cgtcgtcggc cggcccatta tcgaagccaa agatccggtg gccgccgccc
     1381 gcgccatcgt cgccgacatg cagctgggcg ccaagtagcc tcatagcctc gctggcgcga
     1441 gacatttcac actgcaaatt acacacggca aatttcgggt tagctgagat tcgcctgcta
     1501 cgctttccaa taccgataga aatgatgcac cgggctgtgg cctgagccaa tccggtagct
     1561 gtggcgcaac gcatcggtga tgtagctttt cgcgttggtc actgccgcga caatatcctg
     1621 gcccttggcc aggttcgccg cgatggcggc ggaaagcgtg cagccggtgc catgggtgtt
     1681 tttggtaacg atgcgcggcg cgttgagcgc ggtgaacttt ttaccatcgt aaaaaagatc
     1741 cgtggctgaa cctttgagat ggccgccttt gatgagcacg gtttttgcgc ccatcgtgac
     1801 gattcgtttt gccgcttcct tagtttcctc cgcgccgcga agcttcatgc cggtgagcac
     1861 ctcggcttct ggaatattcg gcgtgacgac agtggctaat ggaatcagtt tactgcgcag
     1921 cgcggcgacg gcgctttttt caatcagcaa atcgcccgag gtcgcaacca tcaccggatc
     1981 gacgacgata tgctttaagc gatgctggcg aatcttcttt gccaccaggt cgatgatcgc
     2041 agcgttaacg agcataccgg tcttcaccgc atgggcgccg atgtcggcga tgatcgcgtc
     2101 gatctgcgcg ccgacgagtt tggcattgac cgccaacact gccgtgacgc caatggtatt
     2161 ctgcgccgtg atcgcagtga tcgccgaggt gccgtagacg ccatgggcgg cgaaggtttt
     2221 cagatcggct tggatgccgg cgccggcgcc ggagtccgag ccggcgatgg tgagggcttt
     2281 gcggatggtc atgatgattt cgcgtcgcgc atgatcagtc ggttgtagag ttgcacgagt
     2341 tcagcggtgc gctcgcccca tttctcgtgg gataccactt gttgcttacg cggtccgggg
     2401 tcgacttgat acttgacgtc tttgcggctc acccagcgcc cctggttggc catgatctct
     2461 tgggcttttt tcgccagcat aaagtcgacg aagagcgccg ccccgtgcgg atggggcggc
     2521 cgggcagcaa cccagaatcc ctgcgggatc atcactggga tgaacggctc gggaaatata
     2581 tattcgatcg gcgcgccttt cttttttaaa tcgtaggcca agtgattcga gccgtcgacc
     2641 atgatgggaa actcaccggc ggccaccagt tggccgacga gggtcgtgcc gcggcgaaaa
     2701 ctgggctcct gcttgcccaa tgcttcggcc atgcgccggc cttcggcgtc gccgtaatga
     2761 tcgagcatgg cggcgagcca atcataggac tcgttgtcca tggcgagctt gcccttccac
     2821 ttggg
//
LOCUS       DATIRS010000766         2503 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1138876, whole genome shotgun sequence.
ACCESSION   DATIRS010000766 DATIRS010000000
VERSION     DATIRS010000766.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2503
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1138876"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            507..941
                     /locus_tag="VLM90_09685"
     CDS             507..941
                     /locus_tag="VLM90_09685"
                     /inference="COORDINATES: protein motif:HMM:TIGR00738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HSQ13281.1"
                     /translation="MKVGSKAYYGFLALVELASNYKIHRTTQVKEIAKDQDIPSEYLG
                     QIMVLLNRARLVHGSRGPGGGYILARPPETITIKEVIEVLEGPFATLEMRARKKGGSG
                     ALATERLIQTWAKGVAAMESVLEDTTLADLCKPEQESYMYYI"
     gene            1048..>2503
                     /locus_tag="VLM90_09690"
     CDS             1048..>2503
                     /locus_tag="VLM90_09690"
                     /EC_number="1.8.7.1"
                     /inference="COORDINATES: protein motif:HMM:NF013259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0050311 - sulfite reductase (ferredoxin)
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite/sulfite reductase"
                     /protein_id="HSQ13282.1"
                     /translation="MEKQLTWKEKLGDKIPAELGREIDIFEQQMELRKQGKIDEKVFA
                     ETRLRRGIYGQRYDNGQRHDGKRVQKLKLAADVVKGPETLWDAPGMVRIKIPFGGVTP
                     EQFETLADLSEEYSDGVTHVTTRQDFQFHYVHIDDTPALMRRLAAVGITTQEACGNVV
                     RNVTACPLAGICHEETFDTTPYAKACAKFLMGHPDTQDFGRKVKIAFSGCEQNPCGLV
                     TMHDMGAIAKTRVVDGKQVRGFAFYVGGGLGSVPYKAKLFDEFLPEEELLPTMQAISR
                     VFARLGEKRNRARARIKFLIAHLGVDEFKKLVAEERQKLAADARWTDFLTSVNKPTEE
                     ALKAGISLNGHQRPEGFDAWYKTNVYKQRQAGYVAATVSLPLGDASADHLRALADIAR
                     RFVKDTLRTTVEQNILFRWVSEADLPEFYRALKAIGLGAADAATIVDVTSCPGTDTCK
                     LGIASSRGLARELRQRLGEKSLQLDEAVKNLRIKV"
BASE COUNT          563 a          705 c          740 g          495 t
ORIGIN      
        1 catgctggcg tgggagatga tcgcctcgcc gggggcggcg gcgagattgt tgttcgatcc
       61 caagatgacc gtgatgatca gtaatgcgaa tcgggttact tgtctcatgt caccagcctc
      121 cgagagtttg ctctacgtcg attgcttgcc gcgcagttgg tcggaatata gctgcaatcg
      181 atcgatccaa gcaaattaaa aacagccaag agaaggggag ggaatggccg caaagaacgc
      241 aaagggtaca aaagaagaaa ttaagatatc tcccgcaaag gcgctacttt cgaaatcgtt
      301 gtcatttcga ccggatcgag aaatcctccg agatcccttg ggtcactcgg gatgacgggc
      361 ttccgcccgt caccgttgcg gcttagtgcc cttgcgggaa aaattccgag cttctttgcg
      421 gcctcgcggt ctaaaattgc ccaccaatct attcttgact ttgttaactg aattacttag
      481 tttaaccttt cttgaggaca cgacccatga aagtcggctc gaaagcatat tacggcttcc
      541 tcgccttggt cgagttggcg agcaactata agatccaccg caccacccag gtgaaggaga
      601 tcgccaagga tcaagacatt ccttcggaat atctcggtca gatcatggtc ttgctcaatc
      661 gcgcgcgctt agttcatggc tcgcgcgggc ccggcggcgg ctatatcctg gcgcggccgc
      721 cggaaacgat tacgatcaaa gaagtcatcg aagtcttgga agggccgttc gctacccttg
      781 agatgcgcgc ccggaaaaaa ggcggcagcg gcgcattggc caccgagcgt ttaatccaga
      841 cctgggctaa aggcgtggcg gcgatggagt cggtcttgga ggataccacg ctcgccgatc
      901 tgtgtaagcc ggagcaggaa tcctacatgt attacatcta aattgggcgc gaaaattttt
      961 tgagataata actgactaaa cagatcaact tacttttcat tgcagctctg aggcgggcag
     1021 ccgataaaaa atcgccggag gcgaatcatg gaaaagcagc taacctggaa agaaaaactt
     1081 ggcgacaaaa tccccgccga gcttggccgc gagatcgata tcttcgagca gcagatggag
     1141 ctgcgcaagc agggcaagat cgacgaaaaa gttttcgcgg aaaccagatt gcgccgcggc
     1201 atctacggcc agcgctacga caacggccag cgccacgacg gcaagcgcgt gcaaaagctc
     1261 aaactcgccg ctgatgtggt caaagggccc gagacactct gggatgcgcc gggcatggtg
     1321 cgcatcaaga ttcccttcgg cggcgtgacg ccggagcagt ttgagacttt ggccgatctt
     1381 tccgaggagt attcggacgg cgtcactcat gtgacgacgc gccaggattt tcagtttcac
     1441 tatgttcaca tcgacgacac cccggcgctg atgcgccggc tggccgccgt cggcatcact
     1501 acccaggaag cctgcggcaa tgtcgtgcgc aacgtgacgg cgtgtccgct ggcgggcatc
     1561 tgccatgaag agaccttcga caccactccc tacgccaagg cctgcgccaa gtttctcatg
     1621 ggtcatcccg acacccagga cttcggccgc aaggtgaaga tcgccttttc cggctgcgag
     1681 caaaatccct gcggcctggt gaccatgcac gacatgggcg ccatcgcgaa aaccagagtc
     1741 gtcgacggca agcaggtgcg cggttttgcc ttctatgtcg gcggcggtct gggctcggtg
     1801 ccgtacaagg cgaaactgtt cgacgaattt ttgcccgagg aagagctgct gccgaccatg
     1861 caggcgatct cgcgggtgtt cgcccggctc ggtgagaagc gtaaccgcgc ccgcgcgcgc
     1921 atcaagtttt tgattgcgca tctgggcgtt gacgaattca agaaactggt ggcggaagag
     1981 cggcagaaat tggcggccga tgcgcgttgg accgatttct taacgtcggt caataagccg
     2041 accgaggaag cgctcaaggc cggcatcagt ctcaacggcc accaacggcc ggaaggcttc
     2101 gacgcctggt acaagaccaa tgtctacaag cagcgtcaag ccggctacgt cgccgcgacg
     2161 gtgtcgttgc cgctgggcga tgccagcgcc gatcacctgc gcgccttggc cgacatcgcc
     2221 cggcgcttcg tcaaagacac gctgcgcacc acggtggagc agaatatttt gttccgctgg
     2281 gtcagcgagg ccgatttgcc ggagttttac cgggcgctca aggccatcgg attgggcgcg
     2341 gcggacgcgg cgaccatcgt cgacgtgact tcctgccccg gcaccgacac ttgcaagctt
     2401 ggcatcgcct cctcgcgcgg cctggcgcgg gagctgcgcc agcgcttggg cgagaaaagt
     2461 ttacaactcg atgaggcggt gaaaaatctc cgcatcaaag tca
//
LOCUS       DATIRS010000767         1723 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1728948, whole genome shotgun sequence.
ACCESSION   DATIRS010000767 DATIRS010000000
VERSION     DATIRS010000767.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1723
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1728948"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(109..1206)
                     /locus_tag="VLM90_09695"
     CDS             complement(109..1206)
                     /locus_tag="VLM90_09695"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13283.1"
                     /translation="MQGVVDADTHIAEPEAMWQLIDEQMAPRRPVLVELPEDTWFGDR
                     NALWLIDGQIFPKPAGKGSYRLVTPSAQKAEKVRGDIAIASREVANVEARVKDMDRLG
                     VDVQVIYPTLFLVYITDDPELDTALAKAYNSWLGAACGKSNGRLKFVAVLPLRSIPES
                     LKEMQRAKELGAVGIFFRGIEGDKTIDHPYFHPVYEQAAKLGMPICIHTGSGAPWMLP
                     YFEHARNHTFAHGRALPIFAFRDLLANRIPEKFPGLRFGFIEASAGWAPFMMHILRRL
                     FKDRFEYKNSAELLRASNIFIAAEADEDIPYLAKCIGEDNIVIGSDYGHNDPSAEEKL
                     VESLQKREDIPEPFAKKILCDNPRRLYGLDS"
     gene            1379..>1723
                     /locus_tag="VLM90_09700"
     CDS             1379..>1723
                     /locus_tag="VLM90_09700"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSQ13284.1"
                     /translation="MASTLITGLGLVGTSYAQHAIKRGDSVVFYDMAPRKDFLAHKLG
                     AANVTVVQRDVRDLPSLIETIQKHKCDTVIHTAGLIGGKVGNPIYAGMQINVMGTINV
                     AEAVRLTGVKRLV"
BASE COUNT          388 a          513 c          462 g          360 t
ORIGIN      
        1 ctgcgaaatg ccgtgctacg gtagcgacaa aactttcgat gtcagacatt agccgatcac
       61 atccaaagag ggccacccgc cggtcgcccc tacagaacac tgaccgcctt aactatcgag
      121 tccatacaac cggcgcggat tatcgcaaag aatttttttc gcaaacggct ccgggatatc
      181 ctcgcgcttt tgcaggcttt cgaccagttt ttcctccgcc gaaggatcgt tgtggccata
      241 gtccgagccg atcacgatgt tatcctcgcc gatgcatttg gcgagatagg gaatatcttc
      301 atcggcctcg gcggcaatga aaatgttgga ggcgcgcaac agctcggcgc tgttcttgta
      361 ctcgaaccgg tctttaaaca gtcgccgcag aatgtgcatc atgaacggcg cccagcccgc
      421 cgacgcttca atgaatccga accttaggcc gggaaatttt tccggaatgc ggttcgccag
      481 taagtcgcgg aatgcgaaga tcggcagcgc ccgcccatgg gcgaaggtgt ggttacgcgc
      541 atgttcgaag tacggcagca tccaaggcgc gccggagccg gtgtggatgc agataggcat
      601 gccaagtttg gctgcctgct cgtagaccgg atgaaaatag ggatgatcga tggtcttgtc
      661 gccctctatg ccgcgaaaga atatccccac cgcgccaagc tccttggccc gctgcatttc
      721 tttgagcgat tccgggatcg agcgcaacgg cagcaccgcg acgaacttca accggccgtt
      781 ggacttgccg caagccgcac cgagccagga attgtaggct ttggccaacg ccgtatccaa
      841 ttcaggatcg tcggtgatat agaccaaaaa cagcgtcgga tagatcacct gcacgtcgac
      901 accgagccgg tccatgtctt tgacgcgggc ctcgacgtta gcgacttcgc ggctggcaat
      961 ggcgatatcg ccgcgcactt tttccgcctt ctgcgctgac ggcgtgacca gccgataact
     1021 acccttgccc gccggtttgg gaaagatttg accgtcgatc aaccacaggg cgttgcggtc
     1081 gccaaaccag gtatcttccg gcagctccac caacaccggc cggcgcggcg ccatctgctc
     1141 gtcaatcaac tgccacatcg cctcgggctc ggcgatatgg gtatcggcat cgactactcc
     1201 ttgcatactt ttattcctcc gtgggtcgcg accaattatc ttcctgcgat atataccggc
     1261 gcgatcgtgt tttgcaatcg acgagaaaac caactgactg aatcaaacgc gaaatccgct
     1321 agacatttaa cagccattgc attaagtgaa aactaaacca actgataaag gtgttcatat
     1381 ggcctcaaca ctcatcaccg gcttaggact ggtcggcact tcctacgcgc agcatgcgat
     1441 caagcgcggc gatagcgtgg tattttacga tatggcgccg cgcaaagatt ttttggcgca
     1501 caagctcggc gccgccaacg tcaccgtggt ccagcgcgat gtccgcgatt taccgtcgct
     1561 catcgaaacc attcagaaac ataaatgcga caccgtcatc catacggcgg gactgatcgg
     1621 cggcaaggtc ggcaacccga tctacgccgg catgcagatc aacgtcatgg gcacgatcaa
     1681 cgtggccgag gccgtacgcc tcaccggcgt caagcggttg gtg
//
LOCUS       DATIRS010000768         2791 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1040204, whole genome shotgun sequence.
ACCESSION   DATIRS010000768 DATIRS010000000
VERSION     DATIRS010000768.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2791)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2791)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2791
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1040204"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..813
                     /locus_tag="VLM90_09705"
     CDS             <1..813
                     /locus_tag="VLM90_09705"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13285.1"
                     /translation="LAAVGVMALMSGVLQFVLVSGPVAVVSALRGSNMVYVAGGMSTL
                     DFVLVTRPEIKSAERLKGGVVGLSAIRGANPTATRFALQKLGLAPKDVSLQVIGGISE
                     RIASLRLGKIHGTLFSPPQSITAQREGFNALADVAELGLPFVHIGVATTRAVIRDKPE
                     IVRRYVKSHVEAVALMKTDRDLSIKVLAKYLGQIKERDVLAQSYDAAAPDNRISRKQF
                     PSVAGLQMALDLLADDNPKAKVAKPEDFIDNRFIKELDDSGYIDSLYKPKPR"
     gene            937..1860
                     /locus_tag="VLM90_09710"
     CDS             937..1860
                     /locus_tag="VLM90_09710"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13286.1"
                     /translation="MLLLVGSIRPAAIDGRMVVGVSTVNVAFLPIYLTQDKGFFKDEG
                     LDVLVVMFNAGATNLQAMIGGDVQVMAGGVPETVLARAGGLDIKNFWAISNLMPFQIY
                     GSPSLKSLKDGKGKKFAISRFGSLSEFLTRSALRRAGVDPKDVTMVQIGATPARFTTL
                     ASGIVDATILWFPVTERAKAVGLNKLFDLKELYPNWTNVGFVARESWLAKEKEQATKF
                     LRAYQRGVKHTRENRDDGIRALRKYVGLDAAEAAAGYDEYRDSFPMDGRILDAGITAT
                     VEQEIETGRLKGRVSLNEMIDNSFINLLGKK"
     gene            1894..>2791
                     /locus_tag="VLM90_09715"
     CDS             1894..>2791
                     /locus_tag="VLM90_09715"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13287.1"
                     /translation="MFTVSIRIFAAVLASWLCAGGSAQAKPITLAYNTNSLNVMLPLL
                     VAQELGFFTAEGFEVTPVYVRSGPTAMAAMVSGSADYSIVGSTTVVQAIAKGIPAVVI
                     GNYVRHVNWMLMGGTGVTNLNAIKGQVVGVTSAGGMTEFLTVEALARRGLKRDRDYRI
                     HYAGNSPARVLALETKIIQAAAFSPGERVALEPKGYTLLMDMVQVIPEFPLSILASSR
                     RKLDSSPVEVEAFLRGRHRAMEVIRTDKDRAAAAAFKKTARGDLARERKALDYLVNDY
                     SIVISKENIQALIYAAGVEAEAR"
BASE COUNT          591 a          783 c          850 g          567 t
ORIGIN      
        1 ctcgccgccg tcggagtcat ggcgctgatg tccggcgtac tgcaattcgt gctggtctcg
       61 ggaccggtgg cggttgtaag cgcacttcgc ggctccaata tggtatacgt cgccggcggc
      121 atgtcgaccc tcgactttgt cctggttacc cggccggaaa tcaagagcgc cgaacgactc
      181 aaaggcggcg ttgtcggcct gtcggcgatt cgcggcgcca atccgaccgc cacccgtttc
      241 gcgctgcaaa agcttggcct ggcgcccaag gacgtatcgc tccaggtgat cggcggcatc
      301 agcgagcgaa tcgccagcct gcggctggga aaaatccacg gcacgctgtt cagtccgccg
      361 caaagcatca cggcgcagcg cgaaggcttc aatgccctgg cggatgtcgc cgaactcggc
      421 ttgccgttcg tgcatatcgg cgtggcgacc acccgcgccg tcatccggga taaaccggag
      481 atcgtgcgcc gctacgtcaa atcccatgtc gaggcggtcg cgctgatgaa aaccgatcgc
      541 gacttgtcga tcaaggtgct ggcgaaatat cttgggcaaa taaaagagcg cgatgtcctg
      601 gcgcaatcct atgacgccgc cgcgccggac aaccggatct cgcgcaaaca atttccgtcc
      661 gttgccggtt tgcaaatggc cctcgattta ttggcggacg ataatccgaa ggcgaaggtt
      721 gctaaaccgg aggacttcat cgacaaccgt tttatcaaag agctcgacga cagcggctat
      781 attgacagtc tgtataagcc caagccgcgc tgagaaaact aaaaatatcg cgatggcgtg
      841 gtgcggtagt taacttgact gaaatggttg atttctctag gctccgcggc ggagggaaaa
      901 caaatgcttg agcgccgatc atggctttgc ctaacagtgc tattgctcgt tggcagcatc
      961 cggcctgctg ccatcgatgg ccggatggtc gtcggcgtgt cgacagtgaa cgtcgccttc
     1021 ttgccaatct atctgaccca agacaaaggc ttcttcaaag acgagggctt ggacgttctc
     1081 gtcgtcatgt tcaacgccgg cgcgactaat cttcaggcga tgatcggcgg cgacgtgcag
     1141 gtcatggccg gcggcgtgcc ggagacggtg cttgccaggg caggcggctt ggatatcaaa
     1201 aatttttggg cgatctcaaa tcttatgccg tttcagatct acggcagccc gagcctgaaa
     1261 tcgctgaagg acggcaaggg gaaaaagttt gccatcagcc gcttcggctc gttgtcggaa
     1321 tttctcaccc gctcggcgct gcgccgggcc ggagtcgacc ccaaagacgt taccatggtg
     1381 cagatcggcg ccacgccggc gcgttttacc acactggcaa gcggcatcgt cgatgcgacg
     1441 attctatggt ttcccgtcac cgagcgcgcc aaagcggttg gcctgaataa gctcttcgac
     1501 ctgaaagagc tctatcccaa ctggaccaac gtcggctttg tcgcccgcga aagctggctc
     1561 gccaaagaaa aagagcaagc gacgaaattt ttgcgcgctt accagcgtgg ggtgaagcac
     1621 actcgcgaga atcgcgacga tggcattcgc gccttgagaa aatacgttgg actggacgcc
     1681 gccgaagccg ccgccggata cgacgagtac cgcgattcct ttccaatgga cgggcgcatc
     1741 ctcgatgccg gcattaccgc gacggtcgag caggagatcg agaccggcag gctaaaagga
     1801 agagtttcgc tgaacgagat gatcgacaat agcttcatca atttgctcgg aaaaaagtaa
     1861 cgtatcgctg gttcattcag gggaacccaa aacatgttca ccgtctcgat tagaattttc
     1921 gccgccgtgt tggcgtcttg gctctgtgct ggcgggagcg ctcaggccaa gccgatcacg
     1981 ctggcgtaca ataccaattc tctcaacgtg atgttgccgc tcctggttgc tcaggagtta
     2041 ggatttttta ccgctgaagg tttcgaagtc accccggttt acgtgcgtag cggaccgacg
     2101 gcgatggcgg cgatggtgag cgggtcggcg gattattcca tcgtcggctc gaccacggtg
     2161 gtgcaagcga tcgccaaagg cattccagcc gtagtgatcg gtaattatgt ccgccacgtt
     2221 aattggatgc tgatgggcgg caccggtgtg actaatctca atgcgatcaa gggccaggtg
     2281 gtcggcgtaa cttcggccgg gggcatgacg gagttcttga cggttgaggc gctggcccgc
     2341 cgcggcctca agcgcgatcg cgattatcgg atccactacg cgggcaacag cccggcgcgg
     2401 gtgttggcgt tagagacgaa aattatccaa gccgcggctt tttcgccggg agaacgggtg
     2461 gcgctcgaac cgaagggtta cacattgctc atggatatgg tccaggtcat accggaattc
     2521 cccctgagca ttctcgccag cagccggcgc aagttggaca gcagtccggt tgaagtggaa
     2581 gcgttcctgc gcgggcggca tcgggcgatg gaagtgattc gcaccgacaa ggatcgcgcc
     2641 gcggctgcgg ccttcaaaaa gaccgcgcgc ggcgatctcg ccagggagcg caaagcgttg
     2701 gactatctgg ttaacgatta ttccattgtc atcagcaaag aaaatatcca ggcgctgatc
     2761 tatgccgccg gcgtcgaggc cgaagcgcgc a
//
LOCUS       DATIRS010000769         1961 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_843627, whole genome shotgun sequence.
ACCESSION   DATIRS010000769 DATIRS010000000
VERSION     DATIRS010000769.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1961
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_843627"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..811
                     /locus_tag="VLM90_09720"
     CDS             <1..811
                     /locus_tag="VLM90_09720"
                     /inference="COORDINATES: protein motif:HMM:NF024893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AsmA-like C-terminal region-containing protein"
                     /protein_id="HSQ13288.1"
                     /translation="DLNLPLQGTVSNLSTTPRFNLNLNGDNVDAKPIFQILSVFGLAP
                     RDTEVSGPMGLFLSITGPANSLTTQVRGLFKDVKVNGKRALKGHLSGQVFIRLPLGSG
                     AVTRRLEGDGKLTARDGELTNVDLIEKIQRATGMIGLSKDQRREATTFQKMEADFILG
                     GGYAEFTRLYLVNPQMEVTGDGTMTLERPTLDVAISTALSAQASARAGRSRTTGFFKD
                     KRGRIVVPLKVTGPLENPLVNLNAGKLAEIGLPPNVEKGFGSFFKQLFRGC"
     gene            complement(838..>1961)
                     /locus_tag="VLM90_09725"
     CDS             complement(838..>1961)
                     /locus_tag="VLM90_09725"
                     /inference="COORDINATES: protein motif:HMM:NF015587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YhjD/YihY/BrkB family envelope integrity
                     protein"
                     /protein_id="HSQ13289.1"
                     /translation="LKGLGVHNRMEPALAEALAPLGEKGVEITAHLIGFVDKMKAGAL
                     GGVGLVALFVTVLSLMGSIEEAFNHIWRVKSPRKLARRFSDYLSALLVGPVLVFAAVT
                     ITATLQNHAIVQALLSLQALGTVILLLLRLVPYFTLWGAFTFVYMFIPNTTVKWRSAL
                     VGGLVAAILWQTVGWGFATFVVSSTKYYAIYSSFAILLLFLLWLHIGWVIVLLGAQVA
                     YAHQHIHFFQGDRELLAHSPAGREKLALHIMLLVGRNFYHGLDPMSVSELAQQLRIPA
                     GMVNEFMDLLAQTKLVLPLADEKTFVLGRAPETITIKDILDCVRNAGKTLKNQSDRSE
                     EEIEINDLLLNVDQSTAKTLRGKHLQGLILSLSSSKARG"
BASE COUNT          449 a          583 c          545 g          384 t
ORIGIN      
        1 ggatttgaat ttgccgctgc aaggcaccgt gagcaatctc tcaaccacgc cgcgattcaa
       61 tctcaatctc aatggcgaca acgtcgacgc gaagccgatc ttccaaatcc tctcggtctt
      121 cggtttggcg ccgcgtgaca cggaagtttc cggccccatg ggcctctttc tgagcatcac
      181 cggcccggca aatagcctca ccacgcaagt gcgcggcttg tttaaagacg ttaaagtcaa
      241 cggtaagcga gcactcaaag gccacctgag tgggcaagtc tttatccggt taccgctcgg
      301 cagcggtgcc gtaacgcggc ggctcgaagg cgacggcaaa cttaccgccc gcgacggcga
      361 gctcactaac gtcgatctga ttgaaaaaat ccagcgagcc accggcatga tcggcctgtc
      421 gaaggatcag cggcgcgaag cgacaacgtt tcaaaagatg gaagcggatt ttatccttgg
      481 cggcggctat gccgagttca cccgtcttta tttggtgaat ccacagatgg aggttaccgg
      541 cgacggcacc atgaccctcg aacgaccgac gctggatgtg gcgatcagca cggcgctctc
      601 ggcgcaagcg tcggcgcggg cgggccgcag ccggacgaca ggttttttta aggacaaacg
      661 cggtcgcatc gtcgtgccgt tgaaggttac tggcccgctg gagaatccgt tggtgaactt
      721 aaatgccgga aaacttgccg agatcgggtt accgccgaac gtggaaaaag gcttcggttc
      781 tttcttcaag cagctctttc gcggctgcta gcctcaccca cccccgcgaa cggcttttca
      841 gccgcgtgct ttggacgaac taaggctcag aatgagcccc tgcaggtgtt tgccccttaa
      901 agttttggcg gtcgattggt cgacgttgag cagcagatcg ttgatttcaa tttcctcttc
      961 gctacggtcc gactggtttt tcaatgtctt gccagcgttc ctcacacagt cgaggatgtc
     1021 tttgatcgtg atcgtttccg gcgcgcggcc gagcacaaag gttttctcgt cggccagagg
     1081 caacaccagt ttagtttggg ctaagaggtc cataaactcg ttaaccatac cggccggtat
     1141 gcgcagttgc tgggcgagtt cggacacgct catagggtcg agcccatgat aaaaattgcg
     1201 cccgaccaac agcattatgt gcaacgccag tttctcgcgc cctgccgggc tatgcgccaa
     1261 gagctcccgg tcgccttgaa aaaagtgaat atgctgatgc gcgtaagcca cctgcgcgcc
     1321 cagtaatacg atcacccagc cgatgtgcaa ccagaggaga aacagcaaaa gtatcgcgaa
     1381 gctcgaatag atcgcgtagt acttcgtcga cgagacgaca aaggtggcga acccccagcc
     1441 aacggtctgc cagagtatgg cggcaaccag accgccgacc agcgccgagc gccatttcac
     1501 agtcgtgttc ggaataaaca tataaacgaa tgtgaaggcg ccccataaag tgaaataagg
     1561 caccaagcgc aatagcaaaa gaatgaccgt gccgagcgcc tgcagcgaca ggagcgcctg
     1621 gacgatcgcg tggttttgca gcgtcgccgt gatcgtcacg gcagcgaaaa ccagcaccgg
     1681 cccaaccagc agcgcgctca aataatcgct gaagcgccgc gccagctttc tcggcgactt
     1741 gacgcgccag atatgattga acgcctcttc gatgctaccc atcagcgaca ggacggtgac
     1801 gaacaaagcc accaagccga caccgccgag ggcgcccgcc ttcattttat cgacgaaccc
     1861 gatcaggtgc gcggtaatct ccaccccttt ctcgcccagc ggcgccaacg cctcggccag
     1921 cgccggttcc atgcgattgt gcacgccgag gcctttaagg a
//
LOCUS       DATIRS010000770         2840 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1139297, whole genome shotgun sequence.
ACCESSION   DATIRS010000770 DATIRS010000000
VERSION     DATIRS010000770.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2840)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2840)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2840
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1139297"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..511)
                     /gene="cysE"
                     /locus_tag="VLM90_09730"
     CDS             complement(<1..511)
                     /gene="cysE"
                     /locus_tag="VLM90_09730"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: protein motif:HMM:NF041874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009001 - serine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HSQ13290.1"
                     /translation="MWQTIKEDFQVVSQRDPALRSVWEIVLAYPGFHAILLHRMAHAL
                     WRQGLTTLARFVSHLGRFLTGIEIHPGAKIGRRFFIDHGMGVVIGETAELGDDVTIYQ
                     GVTLGGTSTQRIKRHPTIEDSVTIFSGAAVLGPVTVGRHSRIGAGSVLVTAVPAHSTV
                     VGIPGKVVKV"
     gene            complement(627..2207)
                     /gene="cimA"
                     /locus_tag="VLM90_09735"
     CDS             complement(627..2207)
                     /gene="cimA"
                     /locus_tag="VLM90_09735"
                     /inference="COORDINATES: protein motif:HMM:TIGR00977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043714 - (R)-citramalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citramalate synthase"
                     /protein_id="HSQ13291.1"
                     /translation="MKDVLLYDTTLRDGCQAEDVSFTLEDKLRIAAKLDELGIDYIEG
                     GYPGSNERDADFFKRVKKLKLKNARVASFGTTMKVGIKPSQDFNLRVLLAADTPVVTL
                     VGKTWDLHVRDDLRISQKANLDIIGDSIAYMKKRVDEVIFDAEHFFDGFRANPDYAIE
                     CLKAAQDGGADWIVLCETNGGRLPGEIREALTQVNRAVKTPLGIHCHNDGELAVANTL
                     AGVEMGVTQVQGTINGFGERCGNMNLISVIANLQLKMGKKCVTAAQLKKLREVSQLFY
                     ELANINPNKRQAYVGDSAFAHKGGLHVSGVIKNRETYEHIDPMVVGNRQRVLVSDLSG
                     RSNVVYKGKEYGIDLTDKNDAIKEVLRRTKELEGQGYEFQAAEASFELLIQEALGKKK
                     KNFNLIGFRVIDEKRKEGEAPISEATIQVQVDGELEHAAAMGNGPVNALDQALRRALT
                     KFYPSLKQVELLDYKVRVLSSGEGTGAVVRVLIESGDGKERWGTVGVSHNVIEASWQA
                     LVDSIDYKLYKDARHRAN"
     gene            complement(2216..>2840)
                     /locus_tag="VLM90_09740"
     CDS             complement(2216..>2840)
                     /locus_tag="VLM90_09740"
                     /inference="COORDINATES: protein motif:HMM:NF025210.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HSQ13292.1"
                     /translation="YDEMIEFASTGAKVLEIRSVEFAKKYGVPVHVRSTFADVEGTWL
                     VEEDDSMSDVLVSGVACDKNEAKITLVRVPDQPGLAAQIFGPIAAAHIVVDMIIQNAS
                     QDGTTDLTFTVPMADHQRALAIVEKSLPEVHAKGVRVDTDIAKVSVVGVGMRTHAGVA
                     AMMFETLAREKINIQMISTSEIKISVVIDAKQSDHAVRALHEAFIAN"
BASE COUNT          544 a          867 c          806 g          623 t
ORIGIN      
        1 cgactttgac cactttaccg ggaatgccga cgacggtcga atgggccggc accgcggtca
       61 ccagcaccga accggcgcca atccggctat gacggcccac ggtcaccgga ccgagaaccg
      121 ccgcgccgct gaaaatcgtc acggaatctt cgatggtcgg atggcgtttg atgcgctggg
      181 tggaagtgcc gccgagcgtt acgccttgat agatggtcac gtcatcgccg agctcggcgg
      241 tctcgccgat gaccacgccc atgccatgat cgataaaaaa gcgtcggccg atcttggccc
      301 ccggatggat ctcgataccg gtgagaaatc gtccgaggtg gctgacgaag cgcgccagag
      361 tcgtcagtcc ctggcgccac agcgcatggg ccatgcggtg cagcaagatg gcgtgaaatc
      421 ccggataggc caggacgatt tcccagaccg aacgcagcgc cggatcgcgc tgcgaaacta
      481 cctggaaatc ttctttaatg gtttgccaca tgggagcggg gaatgggtaa atggagtgtt
      541 ggagtgatgg agtattgggt ggaatcggcc cgttctttcc atcactccat tactccacta
      601 ctcctttact ccaatttcct attaatttaa ttcgcccgat ggcgcgcgtc cttgtacaac
      661 ttgtagtcga tactatcgac caacgcttgc cagctcgcct cgatgacgtt gtgcgaaacc
      721 ccgacggtgc cccagcgttc cttgccgtcg cccgattcga tcagcacccg caccaccgcg
      781 ccggtgcctt cgcccgagga cagcacgcgg actttgtagt cgagcaactc gacttgcttg
      841 agcgacgggt aaaatttagt cagcgcccgg cgcagcgctt ggtccagcgc attcaccgga
      901 ccgttgccca tcgccgccgc atgttcgagc tcgccgtcga cttgaacttg aatggtcgct
      961 tcggaaatcg gcgcttcgcc ttccttgcgc ttttcatcga tgacgcgaaa gccgatcaga
     1021 ttgaaattct tctttttctt gcccaacgct tcctgaatca gcagttcgaa ggacgcttcc
     1081 gccgcttgaa actcgtagcc ctggccctcg agttctttgg tgcggcgcag cacctcttta
     1141 atggcatcgt tcttgtcggt caaatcgatg ccgtattctt tgcctttgta gaccacgttg
     1201 ctgcggccgg acagatccga gaccaaaacc cgctggcggt taccgaccac catgggatcg
     1261 atatgctcgt aggtctcgcg gttcttgatc acgccggaaa catgcagccc gcccttatgg
     1321 gcgaaggcgc tgtcgccgac ataggcctgg cgcttgttgg ggttgatgtt ggccagctcg
     1381 tagaatagct gcgacacttc ccggagtttt ttcagctgcg ccgccgtcac gcatttcttg
     1441 cccatcttga gctgcaagtt ggcaatcacc gagatcaaat tcatgttgcc gcagcgttcg
     1501 ccgaaaccgt tgatggtgcc ctgcacttgg gtgacgccca tctccacgcc ggcgagcgtg
     1561 ttggccaccg ccagctcgcc gtcgttatgg caatgaatcc ccagcggcgt cttcaccgcc
     1621 cggttgacct gggtcagcgc ttcgcgaatc tcgccgggca gccgcccgcc attggtctcg
     1681 cacaggacga tccagtcggc gccgccatcc tgcgccgcct tgaggcactc gatggcgtag
     1741 tccgggttgg cgcggaagcc gtcgaagaag tgctcggcgt cgaagatcac ttcgtcgacg
     1801 cgctttttca tgtaagcgat ggagtcgccg atgatgtcca ggttggcctt ttgactgatg
     1861 cgcagatcgt cgcgcacatg caggtcccag gtcttgccga ccagggtcac caccggcgta
     1921 tcggccgcca gcaacacgcg cagattgaaa tcctgggaag gcttgatgcc gaccttcatg
     1981 gtggtgccga aggaagctac ccgggcattc ttgagcttga gctttttgac ccgcttgaaa
     2041 aaatcggcat cgcgctcgtt ggagccggga tagccgcctt cgatgtaatc gatgccgagc
     2101 tcgtccaatt tcgcggcgat gcgcaacttg tcttccaggg taaacgaaac atcttcggct
     2161 tggcagccgt cccgcagcgt cgtgtcgtac agcaaaacat ctttcataac ttcctctaat
     2221 tagcgatgaa ggcctcgtgc aaggcgcgca cggcgtgatc cgactgcttg gcgtcgatga
     2281 ccacggaaat cttgatctcg gaagtcgaga tcatttgaat attgatcttc tcccgcgcca
     2341 gggtctcgaa catcatcgcc gccacgccgg catgggtgcg catgccgacg ccgaccacgg
     2401 aaaccttggc gatatcggta tcgacccgca cgcccttggc gtgcacttcc ggcagcgact
     2461 tctcgacgat ggcgagggcc ctttgatgat cggccatggg cacggtaaaa gtcagatcgg
     2521 tagtgccgtc ctgactggca ttttggatga tcatgtcgac gacgatatgc gctgccgcga
     2581 tggggccgaa tatctgcgcc gccaggccgg gctgatcggg aacccggacc agggtaattt
     2641 tggcttcgtt cttgtcgcaa gccactccgg agaccaatac atcgctcatg ctgtcatcct
     2701 cctcgaccag ccaggtgcct tcgacatcgg caaacgtcga acggacatgc accggcacgc
     2761 cgtatttttt cgcaaactcg acggagcgga tctccaaaac cttcgcgccg gtgctggcga
     2821 actcgatcat ctcatcgtag
//
LOCUS       DATIRS010000771         2172 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_548188, whole genome shotgun sequence.
ACCESSION   DATIRS010000771 DATIRS010000000
VERSION     DATIRS010000771.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2172)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2172)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2172
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_548188"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..425)
                     /locus_tag="VLM90_09745"
     CDS             complement(<1..425)
                     /locus_tag="VLM90_09745"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSQ13293.1"
                     /translation="MFEVAEAYERQMGRWSRQLAPLLIEFAGVDAGERVLDAGCGTGS
                     LSMAIARLTAAGSIVGIDASKGFIEYARAQNSDPRVRFVLGDAQNLSYPEASFDRCLS
                     FLVVNHIPDTPKALNEICRVTKPGGVVATAMWDGTGGNE"
     gene            complement(787..1755)
                     /locus_tag="VLM90_09750"
     CDS             complement(787..1755)
                     /locus_tag="VLM90_09750"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: protein motif:HMM:NF013661.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HSQ13294.1"
                     /translation="MESENILSMGKEKLCSRSPKPTSDRWGAGAVVGAALLALLLCAC
                     AQLPEYTRLRVVQHPSVNFNERRPSFVILHHTGNPEAKRALDTLSNPVLEVSAHYLVA
                     RDGMIYYLVDEMKRAWHAGDSWWGGPIDMNSASIGIELDNDGSEPYAESQIAALLALL
                     ADLEQRYGIPAKNFIGHGDIAPGRKVDPSVEFPWRRLAEHGFGLWCEPPFEPAPPGLD
                     TGALLGAFGYDVSSLDAAIGAFNRHFAGVESPRMTDEGRARLYCLVLKKWAGSAADRV
                     RAAAGSFRATGPEHGADSRQADRPARPDHVSRAGGSWLQGVGSPLC"
BASE COUNT          438 a          668 c          607 g          459 t
ORIGIN      
        1 aactcattgc cgccggtgcc atcccacatg gcggtggcaa ccacgccgcc cggcttggtc
       61 acccggcaga tctcattcaa agctttagga gtgtcgggga tgtgattgac gaccaagaac
      121 gacaagcaac gatcgaacga cgcctccggg taagaaagat tttgcgcatc gcccaatacg
      181 aatctgactc gcgggtcgga attctgcgcg cgggcatatt cgatgaagcc tttagaagcg
      241 tcgatgccga cgatcgaccc agcggccgtc aatcgcgcga tcgccatgga cagcgagccg
      301 gtgccgcaac cagcgtcgag aacgcgttcg ccggcgtcaa ctccggcaaa ctcgatcaac
      361 aacggcgcca attgccggct ccatcggccc atctgccgct cgtaggcttc ggcgacttcg
      421 aacataactc ctccattttt ttgtccttcg ttctctgcga taaatcttcc tgcttacaga
      481 cgcagtagga tctccccggc taaaatttct gaatgttgca tgacgttgaa cgtcgggtag
      541 acgatgaatc actttgcgtc ggtcttgcat aaaatcgcct tcgatgaacg tcccctattg
      601 ttttggttcc cccgcggcgt tgatcactcg ctaaatacac cgcatcctct gccggacccg
      661 cttcgagcgt gaagtgcgac tttcgtttat atagccattt gagcccaaga aaagaaggag
      721 aatataccgg gactcttttg cgccttctga gtgggtatcg ttcgactaat tttctcgata
      781 tctgagttaa cacagcggtg agccgacacc ttgcaaccag gatccaccgg cccgcgaaac
      841 gtgatctggg cgagcgggcc gatcggcctg tcgactatct gcgccgtgct cgggaccagt
      901 agcgcgaaaa gacccggccg ccgcccgcac ccggtcagct gcgctccccg cccacttctt
      961 cagtaccaga caatacaggc gggcgcggcc ttcatcggtc atgcgcgggg attcgacgcc
     1021 tgcgaaatgg cggttgaacg caccgatcgc ggcatcgagg ctggagacgt cgtagccgaa
     1081 ggcgccgagc aacgctccag tgtcgaggcc cggcggcgcc ggctcgaagg gcggctcgca
     1141 ccaaaggccg aagccgtgct ctgccagccg ccgccacggg aactcgacgc tggggtcaac
     1201 cttgcgcccg ggcgcgatgt cgccgtggcc gatgaaattc tttgcgggga tcccgtagcg
     1261 ctgctcgagg tcggccagca aggcgagcag cgccgcgatc tgcgattcgg cgtagggttc
     1321 gctgccgtcg ttgtcgagtt cgatgccgat cgaggctgaa ttcatgtcga tgggcccgcc
     1381 ccaccaggaa tcacccgcgt gccaggcgcg cttcatttcg tccacgaggt agtagatcat
     1441 tccgtcgcgg gcaacgaggt aatgcgcgct gacctctaaa actgggttgg acagggtgtc
     1501 cagggcgcgc ttcgcttccg gattgccggt gtggtgcagg atcacgaaac tcggccggcg
     1561 ctcgttgaaa tttaccgatg gatgctgcac gacccgaagc cgggtgtact cgggcagttg
     1621 tgcgcaggcg cagagcagga gcgcgagcag cgcggcacca actacggctc cagcgcccca
     1681 tctgtcgctc gtaggcttcg gcgacctcga acatagcttt tcctttccca tcgataaaat
     1741 attttcgctt tccactgaac agctgtgaca cggcgtatca tcacgcgatc ccactttcct
     1801 cgaaacgcgg cacatcttcc gagaatgaca tccagctctg tgctgaacgc gtccagatat
     1861 gccgttctat cttaaaccag ttggagtcgt cgaatgtgcc aatcttcact ttattcaatt
     1921 gctcaactca gttccaaacc attcagtggg caaatccctg ccgagaccgc gctttttgca
     1981 agcctcgtaa atcgacgcgc cggcggcggc gaactgaata ccgacgccgg tattgctctt
     2041 gtaataaata atctgttgat cgctcgtgcg cccgggatct ccccggtgat cacttgaccc
     2101 atttgcagac cttatcccag ccgaaggaac cgccctcgat taggtcgagc agctcgcgct
     2161 gctggttcat tt
//
LOCUS       DATIRS010000772         1934 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1237809, whole genome shotgun sequence.
ACCESSION   DATIRS010000772 DATIRS010000000
VERSION     DATIRS010000772.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1934)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1934)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1934
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1237809"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..447
                     /gene="argB"
                     /locus_tag="VLM90_09755"
     CDS             <1..447
                     /gene="argB"
                     /locus_tag="VLM90_09755"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HSQ13295.1"
                     /translation="PEIIDIGMVGEIIGINPLIIDSLDANKFIPVIAPVGVGKDGETY
                     NINAELVAGEVAEALHAEKLLLMTDIEGVKDKKGEFLSHLTEKQARKMIQDGVVGSGM
                     IPKVECCINALKGGVEKTHIIDGRVKHAVLLEIFTKQGIGTEVVRK"
     gene            448..1635
                     /locus_tag="VLM90_09760"
     CDS             448..1635
                     /locus_tag="VLM90_09760"
                     /inference="COORDINATES: protein motif:HMM:NF002325.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HSQ13296.1"
                     /translation="MKNKDVAALTDKFVAKTYARTPLALVKGRGLKVWDADGKEYLDF
                     LAGIAVNSFGHCHPAIVKAIKQQAQTLMHVSNLYHMQPQSELARELCRNSFADRVFFC
                     NSGSEANEAAIKLARRYGLEKLGGKYEIISTHNSFHGRTLATLTATGQEKVRAGYDPL
                     PAGFRQVPYNKLDAMEAAIDEKKTVAILIEPIQAEGGVIVPHETYMLGLREICDQRRI
                     LLIFDEVQTGMGRTGKLFGYENFGVKPDIMTLAKALGGGLPLGAMLAREDVANSFGPG
                     SHASTFGGNPVACAAGLAVMQLLKTGALKNCVQMGKYFVKGLEALKKRFSFIRDIRGK
                     GLLIGVELEIEGSKIAEACMLEGLLMNCTAAKVLRFVPPLTIKKNEIDRGLAILEKVL
                     ARQ"
     gene            1656..>1934
                     /locus_tag="VLM90_09765"
     CDS             1656..>1934
                     /locus_tag="VLM90_09765"
                     /inference="COORDINATES: protein motif:HMM:NF014749.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13297.1"
                     /translation="MNKRDLLNFAGMSRREFDGILGLAAELKRKQQRGIPHRLLAGNQ
                     LAMVFEKPSLRTRATFNVGMIQLGGSAVYLGPAEVGLVTRETPADCARN"
BASE COUNT          443 a          539 c          579 g          373 t
ORIGIN      
        1 ccggagatta tcgacatcgg catggtcggt gagattatcg gcatcaatcc attgatcatt
       61 gattcgctgg atgccaacaa gttcatcccc gtgatcgcgc cggtcggtgt cggcaaagac
      121 ggcgagacct acaacatcaa cgccgaactg gtcgccggcg aagtcgcgga ggcgctgcac
      181 gcggaaaaat tattattgat gaccgacatc gaaggcgtga aggataaaaa aggcgagttc
      241 ttgagccatc tcaccgagaa gcaagcgcgc aaaatgattc aagacggcgt ggtcggttcc
      301 ggcatgattc ccaaggtcga gtgctgcatc aacgcgctca aaggcggcgt cgagaaaact
      361 catatcatcg atggccgggt gaagcatgcc gtgctgctgg aaatttttac caagcaaggt
      421 atcggcactg aggtggtgag aaaataaatg aaaaacaaag atgtcgcggc actgaccgat
      481 aagtttgtcg ccaagaccta cgcgcgcacg ccgctggcgc tggtcaaagg ccggggcctc
      541 aaagtctggg atgccgacgg caaggagtat ctcgattttc tcgccggcat cgcggtcaat
      601 agtttcggcc attgtcatcc ggcgatcgtc aaggcgatca agcagcaggc gcaaaccttg
      661 atgcatgtgt cgaatctcta ccacatgcag ccgcaatcgg agcttgctcg cgaactgtgc
      721 cgcaactcgt ttgccgaccg ggtgtttttt tgcaatagcg gctccgaggc caacgaagcg
      781 gcgatcaaac tcgcgcgccg ctacggcttg gagaagctcg gcggcaaata tgaaatcatc
      841 tcgacgcaca actccttcca cggccgcacc ctggcgaccc tgaccgccac agggcaggaa
      901 aaagtccgcg ccggctacga tccgttgccc gccggctttc gccaggtgcc gtacaacaag
      961 ctcgacgcca tggaagcggc catcgacgag aagaaaaccg tggcgatctt gatcgaaccg
     1021 atccaggccg agggcggcgt catcgtgccc catgagactt atatgttggg cctgcgcgag
     1081 atctgcgatc aacggcggat actcctcatc ttcgatgaag tgcagacggg catgggccgc
     1141 accggcaagc tattcggata tgaaaacttc ggtgtcaaac ccgatatcat gaccctggcc
     1201 aaggctctcg gcggcggctt gccgctcggc gccatgctgg cgcgcgagga cgtcgccaac
     1261 agtttcggtc cgggtagcca tgcgtcgaca ttcggcggca atccagtcgc ttgcgccgcc
     1321 ggtttggcgg tgatgcagct gctcaaaacc ggcgccctca aaaattgcgt gcagatgggc
     1381 aaatacttcg tcaaagggct cgaggctttg aaaaaacggt tttcgtttat ccgcgatatt
     1441 cgcggcaagg gactgctcat cggcgtcgag cttgagatcg aaggcagcaa gatcgccgaa
     1501 gcgtgcatgc tcgaaggctt gctgatgaat tgcacggcgg ctaaagtgct gcgcttcgtg
     1561 ccgccgctga cgatcaagaa gaacgaaatc gaccgaggtc tggcgatcct ggaaaaagtg
     1621 ctggcccgcc aatagcgttt agcatcacta attcgatgaa caaacgcgat ctgctcaatt
     1681 tcgccggcat gagccgccgg gagttcgacg gcatattggg tcttgctgct gagctcaagc
     1741 gcaaacagca gcgcggcatt ccgcatcgac tgttggccgg caatcaactg gcaatggtgt
     1801 ttgagaagcc gagtctgcgc acgcgcgcga cctttaacgt cggcatgatc cagttgggcg
     1861 gcagcgcggt ttacttgggg cccgccgagg ttggcttagt cacgcgggaa accccggcgg
     1921 actgcgcgcg caat
//
LOCUS       DATIRS010000773         1559 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1827519, whole genome shotgun sequence.
ACCESSION   DATIRS010000773 DATIRS010000000
VERSION     DATIRS010000773.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1559
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1827519"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..215
                     /locus_tag="VLM90_09770"
     CDS             <1..215
                     /locus_tag="VLM90_09770"
                     /inference="COORDINATES: protein motif:HMM:NF014799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HSQ13298.1"
                     /translation="AIVMDEGYERYGVTAEIASVIADGAFYYLDAPVKRMGAMDVPVP
                     FSPVLEDQTVPTAENVAKLARILCDK"
     gene            complement(380..1360)
                     /locus_tag="VLM90_09775"
     CDS             complement(380..1360)
                     /locus_tag="VLM90_09775"
                     /EC_number="1.2.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF006667.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HSQ13299.1"
                     /translation="MREITFGQAINEALAEEMRRDPTVFIIGEDVAEAGTPFKVLSGL
                     VKEFGSERVIDSPISEAGIAGIGVGAAMTGMRPVVDIMFGDFITLTMDQMVNQAAKIH
                     YMSGGKLKVPMVLRTTLGATRRSAAQHSQSLHAWLSHIPGLKVVVPSTPYDAKGLLKS
                     AIRDDNPVAFFEDKLMYQLKGPVPTQEYTIPLGVADVKRAGSDITLVATSSMVQVALA
                     AAELLAQYEISAEVVDVRTTAPLDKQTIIESAKKTSRAIVIDEGYERYGVTAEIASVI
                     ADGAFYYLDAPVKRMGAMDVQVPFSPVLEDQTVPTPESVTVLARQLCGKI"
BASE COUNT          320 a          445 c          447 g          347 t
ORIGIN      
        1 gtgccatcgt catggatgaa ggctacgagc gctacggcgt caccgccgag atcgcttcgg
       61 tgatcgccga cggtgctttc tactatctcg atgcgccggt gaaacggatg ggcgccatgg
      121 atgtgccggt accgttctcg cccgtgctcg aagatcagac ggtgccgaca gcggaaaacg
      181 ttgcgaaatt ggcgcgaata ttgtgcgaca aataatgacc gagttctagg aagatcgata
      241 gcaatagtca catagcaacg gtttcaaagg ttccaaacgt cccagttgtt ccaatcgttg
      301 aagaggaatt aacaattgga actattggaa cggctggaac ctcttcgcgc aacttggcac
      361 gattagcatg acaaacgggt catattttgc cgcacaactg ccgcgctaat accgtcaccg
      421 actccggcgt cggcaccgtc tgatcttcga gcaccggcga gaacggcacc tggacgtcca
      481 tcgcgcccat ccgtttcacc ggcgcgtcga gatagtagaa agcgccgtcg gcgatcaccg
      541 acgcaatctc cgcggtcacg ccgtagcgct cgtagccttc gtcgatgacg atggcacggc
      601 tggttttttt tgccgactcg atgattgtct gtttgtccag cggcgcggtg gtgcgcacgt
      661 caacgacttc ggcgctgatc tcatactgtg ccaataattc cgccgcggcc agcgcgacct
      721 gaaccatgct gctggtggcg accagcgtga tgtcgctgcc ggcgcgcttc acatcggcta
      781 cgccgagcgg aattgtgtat tcttgcgtcg gcaccgggcc tttgagttgg tacatcagct
      841 tgtcttcgaa aaaggcgacg gggttgtcgt cgcggatcgc cgacttgagc aaccccttgg
      901 cgtcgtacgg cgttgatggc acgacgactt tcaagccggg aatgtgactc aaccaggcgt
      961 gcaagctctg gctatgctgt gccgccgagc ggcgcgtggc gccaagcgtt gtgcgtaaga
     1021 ccattggaac tttgagcttg ccgccggaca tgtagtgaat tttcgccgcc tgattgacca
     1081 tctgatccat cgtcagcgtt atgaagtcgc cgaacatgat gtcgaccacc gggcgcatgc
     1141 cggtcattgc agcgccgacg ccgataccgg cgatccccgc ttccgaaatc ggcgaatcga
     1201 tcacgcgctc gctgccaaac tcttttacca accccgacaa aactttgaac ggcgtccccg
     1261 cctctgcaac atcttcgccg atgataaaga cggtgggatc gcggcgcatc tcttcagcga
     1321 gcgcttcgtt gatcgcctgg ccgaaggtga tctcgcgcat ggctgtttcg actgacggtg
     1381 tattctgagt tggtgaattc atgctctggg gctctcacac ttccatgcgc cagcgttcaa
     1441 tctcgaatat ccatgggaaa aaatcgggaa gtctttttcg tcattcccgc gcaggcggga
     1501 atccaggtga cggacagagt ccgtcatacc gttgaaaaac ggtatccagg tggatgatg
//
LOCUS       DATIRS010000774         1682 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1139667, whole genome shotgun sequence.
ACCESSION   DATIRS010000774 DATIRS010000000
VERSION     DATIRS010000774.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1682
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1139667"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..840
                     /locus_tag="VLM90_09780"
     CDS             <1..840
                     /locus_tag="VLM90_09780"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSQ13300.1"
                     /translation="LRDAGFVQDRKEGTSVYFSARPSMPEPARELFKSLHSRLGDIPE
                     VKKDHARLEKTRRRRLQRSQSYFESLAGDWERIRKSYFDDRVTSLAIEKLLPRDLILA
                     DIGCGTGSLTFELARFARKVIGVDLSQEMLRRARAAAKERELRNVEFRQGDALKLPLD
                     TRSVDAAFCVMVLHFLPDPERVIAGLCRIVRPGGSVILVDLVEHTQNWMSEQMAHQWL
                     GFERAAIETWFHNAGAESVDYDLTGSFAGEKMARNGNRPVEIFVARATLPKIATAKKK
                     KAH"
     gene            840..>1682
                     /locus_tag="VLM90_09785"
     CDS             840..>1682
                     /locus_tag="VLM90_09785"
                     /inference="COORDINATES: protein motif:HMM:NF014615.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HSQ13301.1"
                     /translation="MTDLEKQLREILRQRVMILDGAMGTMIQSHKLDEKAFRGAEFAG
                     HSHDLKGCNDVLCITQPDLITAIHAEYFEAGADIVETNTFNSTSVSMADYKLESYAYD
                     LNLAGAKAAKRASALVKAKDPSRNCFVAGAIGPTNRTCSISTDVHSAATRGVTYDELV
                     QAYYDQARGLIDGGADLLLVETIFDTLNSKAAFFAILKLFDERKIHLPLMASVTFIQP
                     GSNRGVTGQTVEAFWNSMSHVPMLSVGMNCALGPKEMRPLIDELAQIAPIYVSCHPNA
                     GLPDP"
BASE COUNT          341 a          503 c          504 g          334 t
ORIGIN      
        1 ctgcgcgatg ccggatttgt ccaggaccga aaggaaggaa caagcgttta cttttcggcg
       61 cgcccgagta tgcccgagcc ggcgcgcgag ctgttcaagt cgctccattc gcgcctcggc
      121 gatattccgg aagtgaagaa agaccacgcc cgcttggaga agacccgccg ccggcgcttg
      181 caacgttcac agagttactt cgagtcgctg gccggggatt gggagcgcat ccgcaaaagt
      241 tatttcgacg accgcgtgac ttctctcgct atcgaaaaat tgctgccgcg tgatctgatc
      301 ctcgccgaca tcggctgcgg caccggcagt ttgaccttcg agctggcgcg cttcgcgcgg
      361 aaagtcatcg gtgtcgatct ttcccaggaa atgttgcgcc gggcccgcgc cgcggccaag
      421 gagcgcgagc tacgcaacgt cgaatttcgc cagggcgacg ctctcaagct gccgttggat
      481 actcgtagcg tcgatgcggc gttttgcgtg atggtgttgc atttcttgcc cgaccccgag
      541 cgggtcatcg ccggcttgtg ccgcatcgtc cggcccggcg gctcggtgat cctggtcgat
      601 ctcgtcgagc atacgcagaa ctggatgagc gaacagatgg cgcaccagtg gctcggtttc
      661 gagcgtgccg caatagaaac atggtttcac aacgccggcg ccgaatcggt ggattatgat
      721 ttaaccggct ccttcgccgg cgagaaaatg gcgcgcaacg gcaaccggcc ggtggagatt
      781 tttgtcgcgc gcgccactct gccgaaaata gcaacggcaa aaaaaaagaa agcgcactga
      841 tgaccgatct agaaaagcaa ctgagagaga ttctccgtca acgagtgatg attctcgacg
      901 gcgcgatggg caccatgatc cagtcgcaca agctcgacga gaaggcgttt cgcggcgcgg
      961 agtttgccgg tcattcccac gacctcaagg gctgcaacga cgtgctgtgc atcacccagc
     1021 ccgatctgat caccgcgatc catgcggagt atttcgaggc cggcgcggat atcgttgaga
     1081 ccaatacgtt caattcgacc tcggtatcca tggcggacta caaactggag tcctacgcct
     1141 acgacttaaa tctcgcgggt gcaaaggccg ctaagagggc gtcggctctt gtaaaggcga
     1201 aagatccgtc gcgaaactgc tttgtcgctg gcgccatcgg tccgaccaat cggacctgtt
     1261 cgatttccac cgacgtgcac agcgccgcga cgcgcggcgt cacctacgat gaactggttc
     1321 aagcctacta cgaccaggcg cgcggcttga tcgacggcgg cgccgacttg ttgctggtcg
     1381 agaccatctt cgacacgctc aactcgaagg cggcgttttt cgcgatattg aagcttttcg
     1441 acgagcgtaa gatccatttg ccgctgatgg cgtcggtcac gttcattcag ccgggcagca
     1501 accgcggcgt caccggccag accgtcgaag ccttttggaa ttcgatgtcc cacgtgccga
     1561 tgttgagcgt gggcatgaac tgcgcgttgg gcccgaaaga aatgcgcccg ctcatcgacg
     1621 agctggcgca gatcgcgccg atctacgtca gttgccatcc caacgcgggc cttcccgatc
     1681 cg
//
LOCUS       DATIRS010000775         1683 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1040955, whole genome shotgun sequence.
ACCESSION   DATIRS010000775 DATIRS010000000
VERSION     DATIRS010000775.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1683)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1683)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1683
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1040955"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            114..1106
                     /locus_tag="VLM90_09790"
     CDS             114..1106
                     /locus_tag="VLM90_09790"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13302.1"
                     /translation="MNIQFSVGMAPNPRTWPLFDGRVKADGIDLIMSPVHASELFWRQ
                     LRFADFDLSDMSFSSLLIAIAHGDKRWVGLPIFTTRRLFHTGILVRRDGGIDTPADLK
                     GKRVAVPEYQQTAALWTRGALQHEFGVAPKDMEFWMERNPEHSHGGATEFTAPPGVTI
                     HQIPLGKDIGSMMLSGELQAALHYLVNQNLVDRSSADLWHHPAIKYLFPDPKAEAVRY
                     YNKTGIYPINHCVVLKREIAEQHPWAILNLYKAFERANAIADEQRMEHVNYYLETGRL
                     PADAKTALETTLVQYGIKANRRVLETAAQYSVEQGLTPRLLKLDEVFAPSTMEQ"
     gene            complement(1365..>1683)
                     /locus_tag="VLM90_09795"
     CDS             complement(1365..>1683)
                     /locus_tag="VLM90_09795"
                     /inference="COORDINATES: protein motif:HMM:NF014950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HSQ13303.1"
                     /translation="MAALKAYEWPGNIRELEHTIERAVLLGKGAVIGMDDLPPAMAKK
                     AELEILMVQGIAKHFTLADLEREYIGKVLESTQGNKTEAAKMLGVDRTTLYRKLEEYK
                     IRA"
BASE COUNT          366 a          496 c          462 g          359 t
ORIGIN      
        1 aaaacggatt atgcggttgt cacggcggcg ctaatcttgt tattgggata actaccggtg
       61 cacgacccgg gttaatcaaa tcctaatccg aacgggactc taaggggaaa ccaatgaata
      121 tccagtttag cgtcggcatg gcgcccaatc cgcgcacttg gccgctattt gacggcaggg
      181 taaaagccga tggcatcgac ctgatcatgt cgccggtgca cgcttccgag ttattttggc
      241 gccagctccg ctttgccgac ttcgacctgt ctgatatgtc gttctcgtca ctgctgatcg
      301 ccatcgccca cggcgataag cgttgggtcg gtttgccgat cttcaccacg cgtcggttat
      361 ttcataccgg cattctggtc cggcgcgatg gcgggatcga cacgccggct gatctcaaag
      421 gcaaacgggt cgccgtcccg gagtaccagc aaaccgcggc gttatggacg cgcggcgcgc
      481 ttcagcacga gttcggcgtc gcaccgaaag atatggaatt ttggatggag cgcaatcccg
      541 agcacagcca cggcggcgcc accgaattca ccgcgccgcc gggggtgacg attcatcaga
      601 tcccgctcgg caaagacatc ggctcgatga tgctatccgg cgagctccaa gccgcgctgc
      661 attatctcgt caaccagaat ctcgtcgacc gcagcagcgc tgacctgtgg caccacccgg
      721 cgataaaata cttattcccg gacccgaaag cagaagccgt aaggtattac aacaagaccg
      781 gaatctatcc gatcaaccac tgcgtcgtgc ttaaacgcga gatcgccgag cagcatcctt
      841 gggcgattct caatctttat aaggccttcg agcgcgccaa tgccatcgcc gacgaacaac
      901 gtatggaaca tgtcaattac tacctcgaga ccggccggct gccggcggac gcaaaaacgg
      961 ctctggagac gaccttggtc caatacggca tcaaggccaa ccggcgggtg ttggaaaccg
     1021 cggcgcagta ttcagtcgag caaggattga cgccgcgcct gctcaagctc gatgaagtat
     1081 ttgccccgag caccatggag cagtagccgc gccggcgatt tgccgccggg tcacggcccg
     1141 cgccaccggc ccaacgcttt cctggatatc accgggtcaa gcaggaagtc ggctaccggc
     1201 ccgagtacac gatcgaacgc gcgctggaca aatatctgga tccatccaga gtaattatcc
     1261 agccgctttg gttgcatggc gtgaaagctt atcgcaacgg agatgagacg agttggccag
     1321 tgcattctcc ataaataccc gcggggcggc tcggcaaacc tgattcaagc cctaattttg
     1381 tattcttcga gcttgcgata gagcgttgtg cggtcgacac caagcatctt agcggcttcg
     1441 gtcttgttgc cttgggtgga ctccaacact ttgccgatat attcccgctc gagatcggcg
     1501 agcgtaaagt gtttggcgat gccctgaacc attaagattt ctagttcagc ttttttagcc
     1561 atggcgggcg gcaaatcgtc catcccgatc acagctcctt ttcccagaag tacggccctt
     1621 tcgatggtgt gttcgagttc acggatgtta cccggccatt cgtatgcctt taacgccgcc
     1681 atg
//
LOCUS       DATIRS010000776         2206 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1139671, whole genome shotgun sequence.
ACCESSION   DATIRS010000776 DATIRS010000000
VERSION     DATIRS010000776.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2206
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1139671"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2206
                     /locus_tag="VLM90_09800"
     CDS             <1..>2206
                     /locus_tag="VLM90_09800"
                     /inference="COORDINATES: protein motif:HMM:TIGR01733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid adenylation domain-containing
                     protein"
                     /protein_id="HSQ13304.1"
                     /translation="TPRAATGSLKGARQKIILDQALTAGLKNLSARASNTLFVTLMAA
                     FNVLLWRYTRQDDLVVGFPVANRGHPVLDNLIGSFVNTLALRSDLSGDPTFIQLLARL
                     RAKLQEALAHQELPFERLVDELKQTRDANRTAIFQTLFTFQNQLPAELSLPGIRSQAI
                     DCDSGGAKYDLSLALGERDGRLSGFVEYRRSLFADDTIARMLQHFLTLLQAIVADPDR
                     PIARLPMMSEKERRLSLVEWNQTRAVLPKTCVHQLFERQARRTPSALALECGPERLTY
                     GRLNRRANRVARYLTKLGVGRNRVVAVCLERSAEMVVALLAVLKAGAAYLPLDPEYPR
                     ERLDFILDDAQASVLISQKSIADDRGWKIDDGDPRSSILHPRPCLILLDGERRKIETH
                     SSENIKRGCSPRDLAYVIYTSGSTGHPKGVEIEQRSWVNCLLSMQRQLKIAKADVWLA
                     VTTVSFDIAAAEIFLPLITGGKLVVASADEARDGERLAIRLKSSGATTMQATPSTWRL
                     LLEAGWHGNGEFKILCGGEALPRALADRLLTCGRLWNLYGPTETTIWSALHRVEAVGD
                     TIPIGRPLANTQLYILDGVGQPVPIGVVGELYIGGAGVARGYLNRPDLTAERFIANPF
                     SREPGARIYRTGDLARHQIDGTVELLGRTDYQVKLRGYRIELAEIESVLRLHPAVRDA
                     AVVALATGGEGESELVAYLVPRDGVTLAENQLRSYLSSKLPNCMVPAVFSSLP"
BASE COUNT          420 a          651 c          681 g          454 t
ORIGIN      
        1 tacgccacgg gcggcaaccg ggagtttaaa aggcgcccgg cagaaaatca tactcgacca
       61 agcgctcacc gccgggctca aaaatctcag cgccagggca tcgaatacgc tgttcgtcac
      121 cttgatggcg gcgtttaacg tcctgctctg gcgctacacg cggcaggacg atctcgttgt
      181 tggtttcccc gtggccaatc gcggccatcc ggtgctggac aatctaatcg gctcgttcgt
      241 caatactctg gcgctacgca gcgatctctc cggtgatccg acatttattc aactgctggc
      301 aaggctgcgc gctaaattgc aagaggcgct ggcgcatcag gagctgccgt tcgagcggct
      361 ggtcgatgag ttgaagcaaa cgcgcgatgc caaccgcacg gcgatttttc agaccctgtt
      421 cacgtttcaa aaccagttgc ccgccgagtt gagcttgcct ggcattcgca gccaggccat
      481 cgactgcgac agcggcgggg ccaaatacga tctcagcctg gccttgggcg aacgcgacgg
      541 ccggctcagc ggctttgttg aatatcgcag atcactattc gccgacgaca ccatcgcacg
      601 catgctgcaa catttcctca cgctgctgca agcgatcgtc gccgacccgg accggccgat
      661 cgcgcgtctg ccgatgatga gtgaaaagga gcgccgccta tcgctggtag agtggaacca
      721 gacgcgcgcg gttctaccca agacttgtgt gcatcaactg ttcgaacgcc aagcgcggcg
      781 cacgccgagc gcgctggcgc ttgagtgcgg cccggagcgc ttgacctacg gccgactgaa
      841 tcggcgcgcc aaccgcgtgg cgcgctattt aacaaaactt ggcgtcgggc gaaaccgcgt
      901 cgtcgccgta tgcctggagc gctcggccga aatggtcgtt gccctgctcg ccgtgctcaa
      961 agccggcgcg gcctatttac ccctcgaccc ggaatatccg agagaacggc tggattttat
     1021 tttagacgac gcccaggcgt cggtgctgat tagccagaag agtatcgccg acgatcgagg
     1081 atggaaaatc gatgatggcg atcctcgatc ctcaatcctc catcctcgac cttgtctcat
     1141 attattggat ggtgagcgac gaaagattga aacccatagc agcgagaata ttaagcgcgg
     1201 gtgttcgccg cgcgatctcg cctacgtgat ttacacttcg ggatcgaccg gccatcctaa
     1261 aggcgtcgag atcgaacagc gctcgtgggt caactgcctg ctgtcgatgc agcgccaact
     1321 gaagatcgcc aaagccgatg tctggctggc ggtgacgaca gtttcttttg acatcgccgc
     1381 ggcggaaatc tttctgccgt tgatcaccgg cgggaaatta gtggtcgcca gcgctgacga
     1441 ggcgcgcgat ggcgagcgtt tggcgatacg gttgaagagt tccggcgcga cgacaatgca
     1501 ggcgacgccg tcgacttggc gtctgctgct cgaagccggc tggcatggca atggcgagtt
     1561 caagattctc tgcggcggcg aggcgttgcc gcgcgctttg gctgatcgct tgttgacttg
     1621 cggccggctg tggaatctct atggccctac cgaaacaacc atctggtcgg cgctgcatcg
     1681 ggtcgaggct gtcggcgata ccattcccat cggccggcct ctggcgaata cccagctcta
     1741 tattctggac ggcgttgggc agccggtgcc gatcggcgtg gttggcgagc tttacatcgg
     1801 cggcgccggc gtggcgcgcg gttatttgaa tcggccggac ttgaccgcgg aacgctttat
     1861 cgcgaatccc tttagccgtg aacccggtgc acggatttat cgcactggag acctggctcg
     1921 gcatcagatc gacggcaccg tggagttgct tggccgcacc gactaccagg tgaagctgcg
     1981 cggttaccgc atcgaattgg ccgagattga gagcgttctc cgactccatc cagcggtgcg
     2041 ggatgcggca gtcgtcgcct tggccaccgg cggcgagggc gagagtgagt tggtcgccta
     2101 cttggtgccc cgagacggcg tgacgttggc ggaaaatcaa ttgcgtagct acctgagcag
     2161 taagttgccc aactgcatgg tgccggctgt tttcagctct ttaccg
//
LOCUS       DATIRS010000777         3673 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1924652, whole genome shotgun sequence.
ACCESSION   DATIRS010000777 DATIRS010000000
VERSION     DATIRS010000777.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3673
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1924652"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1624)
                     /locus_tag="VLM90_09805"
     CDS             complement(<1..1624)
                     /locus_tag="VLM90_09805"
                     /inference="COORDINATES: protein motif:HMM:NF025871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HSQ13305.1"
                     /translation="MVAAQQIVKYFEQATEDFKQATEYRDLVGGAAGKVSADDFLRNI
                     FRTHYLSSHIVALCYASLPSAAAEMLKENLLEEMGRSEGEPPHSALLMEMARVIGFTD
                     DEVNQLIADARRRVALVCASRVPVATLRELCLSVLIETMSFEFMLSRCASELASALSD
                     QYALPRSALRWFELHSEVDIRHAEEAITVIQDYSEFHQISDALFDQIAEFTLGDQLFC
                     RHYFPPSSKLKTRSTADRPASIEALSIYRLRIPFHQAFSHALHSREESDAIVVKVSGS
                     DGRSGFGEGLARVYVTGETTESMIARIRDFLAPRIFQESFSPGWQTIEQLQSLQPDWT
                     RNSPSNNGVIAWNAAFCAVELALLDWSLRADHSALADYLPPARFEVVYSGVISADRPK
                     DAAALAKRMARLGLAQIKIKVGTPGDAARLEAVRKAVGSAVELRADANGAWSAAQAIE
                     QLTLLAPFKLALIEQPVAADDIAGMKQVRAQCAIPVMADESLVTIEQARRLIAEKACD
                     LYNLRMSKNGGIAGSLAIAKLAEGAGMKIQVGA"
     gene            complement(1881..3461)
                     /locus_tag="VLM90_09810"
     CDS             complement(1881..3461)
                     /locus_tag="VLM90_09810"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSQ13306.1"
                     /translation="MEYRRLPGDLLHAKFVEMAKRHWSRFCMADTTGTELTYGKALIA
                     SLLFCRWLRSHCAGQSMIGVILPASVGGALVNIATLLAGKVPVNLNFTGGKETMAAAL
                     AQCKITTIVTSRMFLEKANLEEMDGMVFVEDIRQTFTGARKLATAVKAYVTPARWLNR
                     RARKQQRPNDLATIIFSSGSTGTPKGVMLSHHNLISNIEAIGQVIQFTPQDRIMGILP
                     LFHSFGFTATIWLPLLTGFGAVYHPNPTDAKTIGETVEKYRATLLISTPTFYVNYWRR
                     CNKEQFASLRYVIAGAEKLREQIANGYQEKFGITILEGYGCTELSPVVAVNTPDVVHD
                     KEKQTGHKPGTVGHPLPGVATKVIDPDSGETLGPGEAGLLLVKGPNVMLGYLNQQNLT
                     DQAMRQGWYITGDIATIDEDGFITITDRLSRFSKIGGEMVPHMKIEEIINDVLGSPAS
                     VVTAIPDEQRGERLVVFYAKNGVRREELWDQLNKSALPKLWVPKREDLHAIDEIPILG
                     SGKADLKRVKAMALEKAL"
     gene            complement(3471..>3673)
                     /locus_tag="VLM90_09815"
     CDS             complement(3471..>3673)
                     /locus_tag="VLM90_09815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13307.1"
                     /translation="KIVEGLNVPIVPVHLDQLWGSIFSFKDGKFFWKWPKIVPYAVTV
                     SFGPPLPPTSTVAQVRNAILEL"
BASE COUNT          696 a         1051 c         1152 g          774 t
ORIGIN      
        1 gggcgccgac ttgaattttc attccggcgc cctcggcgag cttggcgatc gccaagcttc
       61 cggcgatgcc gccgtttttc gacatgcgaa ggttgtacag gtcgcaggct ttttctgcga
      121 tcaagcggcg cgcctgttcg atggtgacca gcgactcgtc ggccatgacc gggatggcgc
      181 attgggcgcg cacttgtttc atgccggcga tatcgtcagc cgccaccggc tgttcgatga
      241 gggcgagttt aaacggcgcc agcagcgtca actgttcaat tgcctgcgcc gcgctccagg
      301 cgccgttggc gtcggcgcgc agttcgacgg cgctgcccac cgctttgcgg actgcttcca
      361 agcgcgcggc gtcacccggc gtgccgactt tgattttgat ctgcgctagg cccaagcgcg
      421 ccattcgttt ggccaacgcc gccgcgtcct tcggacggtc ggcggagatc acgccgctgt
      481 agacgacctc gaaacgcgcc ggcggcagat agtccgccag cgcgctatgg tcggcgcgca
      541 ggctccaatc gagcagtgcc agctcgacgg cgcaaaacgc cgcattccag gcgatgacgc
      601 cattgtttga tggcgaattc cgcgtccagt ccggctgcag cgactgcaac tgctcgatgg
      661 tttgccaccc tggggaaaac gattcctgaa aaatccttgg cgcgaggaaa tcgcggatgc
      721 gggcgatcat cgattcagtg gtctcaccgg tgacatagac gcgcgccagt ccttcgccga
      781 aaccgctacg gccgtcgctg ccgctgacct tgacgacgat ggcgtcgctt tcctcgcggc
      841 tgtgcagcgc atggctgaac gcctggtgaa acggaatgcg caggcggtaa atcgacagcg
      901 cttcgatgct cgccggccgg tctgctgtgc tgcgggtttt cagcttcgag ctcggcggaa
      961 aatagtggcg acagaatagc tggtcgccca gggtgaattc ggcgatctgg tcgaacaggg
     1021 cgtcggagat ctgatgaaac tcgctgtagt cttggatcac cgtgatcgct tcttcggcgt
     1081 ggcggatatc gacttccgaa tgaagttcga accagcgcag ggcggagcgc ggcagggcat
     1141 attgatcgct cagcgcgctg gccagttcgc tggcacagcg cgacagcatg aactcgaagc
     1201 tcatggtttc tatcagcacc gacagacaaa gctcgcgcaa cgtcgccacc ggcacgcggc
     1261 tggcgcagac cagcgcgacg cgccggcgcg catcggcgat cagttgattg acttcgtcgt
     1321 cagtgaagcc gataacgcga gccatttcca tgagcagcgc ggaatgggga ggctcgccct
     1381 ccgaccggcc catttcttcg agcaggtttt ctttcaacat ctcggcggcc gccgatggca
     1441 gcgaggcgta gcacagcgcg acgatatgcg acgagagata atgggtgcga aagatattgc
     1501 gcaaaaaatc gtcggcggac accttgccgg cagcgccgcc gacgaggtcg cgatattccg
     1561 tggcctgctt gaaatcttcc gtggcctgct cgaagtattt aacgatctgt tgtgcggcga
     1621 ccatggttac ctctaagcga tgattttgag cgattgattt tttcgtaacg gattcggaat
     1681 gttaaccgca aagagcgcaa aaaacgcaag aaaggaatcg gaagtttccc gcaaaggcgc
     1741 aaagacgcta agtgacaggc ctccggcctg tcatcccgag cgaatgcgag ggatctaaaa
     1801 aagatttctc tctccgttcg aaatgacaac gtccgacctt tgcgccgttg cgccttggcg
     1861 ggagatcttc caaaccccgg tcacagcgct ttttccaagg ccatcgcttt gactcttttc
     1921 aaatcggctt tgcctgagcc gaggatggga atctcgtcga tggcgtggag atcttcgcgc
     1981 ttgggaaccc acagcttggg caatgcggat ttgttgagct ggtcccacag ctcttcgcgg
     2041 cggacgccgt tcttggcgta aaaaaccacc aacctctcac cgcgctgttc gtccgggatc
     2101 gccgtgacca ccgaagccgg gctgccgagg acgtcgttga tgatctcttc gatcttcata
     2161 tgcggcacca tctcgccgcc gatcttgctg aagcgcgaca ggcggtcggt gatggtgatg
     2221 aagccgtcct catcgatggt cgcgatatcg ccagtgatat accagccttg gcgcatcgct
     2281 tggtcagtca ggttctgctg attcaagtag ccgagcatga cgttaggtcc tttgacgagc
     2341 agcagccccg cttcgcctgg gccgagggtc tcgccgctat cgggatcgat caccttggtc
     2401 gcgacgcctg gtagcggatg gccgaccgtg ccgggcttgt ggccggtctg tttttccttg
     2461 tcgtggacga catcgggtgt gttgaccgcg accacggggg agagctccgt gcagccgtag
     2521 ccttcgagga tcgtgatgcc gaatttttct tggtaaccgt tggcgatctg ctcgcgcagc
     2581 ttttccgcgc cggcgatgac gtagcgcagc gaggcgaact gttccttgtt gcagcggcgc
     2641 cagtagttga cgtagaaggt cggcgtgctg atcaataatg tcgcgcggta tttctcgacg
     2701 gtttcaccta tggtcttggc gtcggtggga ttggggtgat agaccgcgcc gaagccagtc
     2761 agcagcggca gccagatggt cgcggtgaag ccgaaggagt gaaacaaagg caggatgccc
     2821 atgatgcgat cctgcggcgt gaattgaatc acctggccga tcgcctcgat gttggaaatt
     2881 aagttgtggt gcgacagcat gacgcctttg ggcgtgccgg tgctgccgct ggaaaatatg
     2941 atcgtggcga gatcgttggg acgctgttgt ttgcgcgcgc gccggttgag ccaacgcgcc
     3001 ggcgtgacat aggctttgac tgcagtggcg agtttgcgcg cgccggtaaa cgtctggcgg
     3061 atatcttcga cgaaaaccat gccgtccatt tcctcgagat tggctttctc caaaaacatt
     3121 cgcgaggtga cgatggtggt gatcttacat tgggccagcg ccgcggccat ggtttctttg
     3181 ccgccggtga agtttaaatt taccggcact ttgcccgcta gcagagtggc gatgttgacc
     3241 agcgcgccgc cgacgctggc gggcaggatc acgccgatca tcgactggcc ggcgcaatgg
     3301 cttctcagcc agcggcaaaa aagcaggctg gcgatgagcg ccttgccata ggtgagctcc
     3361 gtgccggtgg tgtcggccat gcagaaccgc gaccagtggc gcttggccat ctcgacgaac
     3421 ttggcgtgga gcagatcgcc gggaagacgg cggtattcca ccgcttcgct ttacaactcg
     3481 aggatcgcgt tgcgcacctg ggccacggtt gaggttggcg gcaacggcgg accaaaggag
     3541 accgtgaccg cataggggac gattttcggc cacttccaaa aaaacttgcc gtctttgaaa
     3601 ctgaagatgc tgccccagag ctgatccagg tgcaccggca cgatcggaac attcaaaccc
     3661 tcgacgatct tct
//
LOCUS       DATIRS010000778         1531 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1729862, whole genome shotgun sequence.
ACCESSION   DATIRS010000778 DATIRS010000000
VERSION     DATIRS010000778.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1531
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1729862"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..991)
                     /locus_tag="VLM90_09820"
     CDS             complement(<1..991)
                     /locus_tag="VLM90_09820"
                     /inference="COORDINATES: protein motif:HMM:TIGR00368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HSQ13308.1"
                     /translation="MLAKVNSAALYGIDALRVEVEIDLASGLPQLATVGLPEGAVKES
                     KDRIRAAVKNCGYTFPAKRITINLAPADIKKEGSAYDLPMAIGILAAEGTLEKNRLDD
                     YFLIGELSLDGSVKPVRGALSIAMAAKKEKVRGLILPEQNASEAAVVSEVEVLGVRDL
                     PQVVEFLNGTRALPATSANLDDLFSQHSQYNSDFNDVKGQQHVKRALEVAAAGGHNVI
                     LVGPPGSGKTMLAKRLPTILPDLTLAEALETTKIHSVMGTLGNQAIIATRPFRSPHHT
                     ISDAGLVGGGTVPKPGEVSLAHNGVLFLDELPEFRRNVLEVMRQPLEDGNITVS"
     gene            complement(1248..1481)
                     /locus_tag="VLM90_09825"
     CDS             complement(1248..1481)
                     /locus_tag="VLM90_09825"
                     /inference="COORDINATES: protein motif:HMM:TIGR02605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HSQ13309.1"
                     /translation="MPLYEYECTKGHRFEALQKVSEKPLNKCDKCRAGAKRAVSQTTL
                     LHNHGVHVFDRVTGDDVLRGRPSSLKSFKKDKF"
BASE COUNT          282 a          402 c          503 g          344 t
ORIGIN      
        1 gggaaacggt gatgttgccg tcttccaagg gctggcgcat gacttcaaga acattgcggc
       61 gaaactccgg cagctcgtcg aggaacaaca cgccgttgtg ggcgagggaa acttctcccg
      121 gcttgggtac ggtgccgccg ccgaccaggc cggcgtcgga gatcgtgtga tgcggtgagc
      181 ggaacggccg ggtggcgatg atcgcttggt tgccgagcgt gcccatgacg ctgtggatct
      241 tggtggtctc cagggcttcg gccaaggtca ggtcggggag aatcgttggc agccgcttgg
      301 ccagcatggt tttacccgag ccaggcgggc cgacgaggat gacgttgtgg ccgccggcgg
      361 cagcgacttc gagggcgcgt ttgacatgct gctggccttt gacgtcgtta aagtcggagt
      421 tgtactgcga gtgctggctg aacaaatcgt ccagatttgc gctggtggcc ggcagggctc
      481 gggtgccgtt caaaaattcc accacttgcg gcaggtcgcg cacacccaga acttcaactt
      541 cgctgaccac cgcggcttcc gaggcgtttt gttcgggtaa gatcaagccg cggacttttt
      601 ctttcttggc cgccatggcg atcgacagcg cgccgcgcac cggtttgacc gagccgtcga
      661 gggagagctc gccgatgaga aagtagtcgt cgaggcgatt tttctccaag gtgccctcgg
      721 cggcgagaat gccgatggcc atcggcaggt cgtaggccga gccttctttt ttgatgtcgg
      781 cgggagcgag attgatggtg atgcgcttgg ccgggaaggt ataaccgcag ttttttaccg
      841 cggcgcggat gcggtctttg ctctctttga ccgcgccttc gggcaagccg acggttgcta
      901 gttgcggcaa accggaggcg agatcgatct cgacttcgac gcggagtgca tcgataccat
      961 aaagagcggc gctgttgacc ttggcgagca taaccggttg ggaagcgccc gtacgctaac
     1021 aaaggcggct ctcgagcaca aacggattct tttgaatcta atcttccccg cagcttgctg
     1081 cggcacaaaa ttgctgggtt tccaaatggg gttgaacatc ccatttggtc gcgagcggag
     1141 ttcatccccc gatcgcgaaa tgcccggttg attggataat tgatactaga gaatggaaaa
     1201 tggccggatc gggccatgtt agccgcgccg ctgcttttgc gagtgcgcta gaatttgtct
     1261 ttcttgaagg acttcaagga tgacggccgg ccgcgcagga catcgtcgcc ggtgacccgg
     1321 tcgaagacat ggacgccgtg attgtgcagc aaggtggtct gcgaaaccgc tcgtttcgcg
     1381 ccggcgcggc acttgtcgca cttattgagc ggtttctcgg agaccttctg gagagcttcg
     1441 aagcgatggc ccttggtgca ttcgtattcg taaagcggca tgttcggtgt atttagctac
     1501 catatcgatg acagtggctc aatcttggct g
//
LOCUS       DATIRS010000779         4426 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1630916, whole genome shotgun sequence.
ACCESSION   DATIRS010000779 DATIRS010000000
VERSION     DATIRS010000779.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4426
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1630916"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(123..986)
                     /locus_tag="VLM90_09830"
     CDS             complement(123..986)
                     /locus_tag="VLM90_09830"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HSQ13310.1"
                     /translation="MTNFETILFEKQRRGVLITLNRPALRNALNRKMKDELRAALELA
                     RDDEAIRAVVLTGAGGFFSSGDDMNESLVGKPVWPYGIAEGSALGDVYNRLRDRARQE
                     KIDEQLYRWQFPKPIIAAVSGWCLGSASWLALSSHLTIAADDAMFGQPQVRHSDGTDF
                     IWTVLGKFKNAVRYGLTGDSVDAKEALRLRLVNKVVAKDRLLDECFRLVERVALVPPD
                     TVKINLQKATSGYEMMGLGKAWSLNAELSALAQLSRREEFYQPLEEARQQGGWKAFFA
                     TRDAPFRDKTK"
     gene            complement(1129..2007)
                     /locus_tag="VLM90_09835"
     CDS             complement(1129..2007)
                     /locus_tag="VLM90_09835"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HSQ13311.1"
                     /translation="MADSDEILYHKQRQGVLITLNRPAAMNAATRPMLHKLGAALDDA
                     VADAQVRAIVLTGSGRAFSTGMDQGGGAAHRRDMDWPYGVRAGESAADFIDNYRGHEA
                     IFMRIFECPKPVIGAINGWAMGVGSWMSLFTHITIASEQAVFAQPEVRHGSNTGFIWT
                     LLAGFKDGLRYSLTGDHIDALEALRIGLVNQVVPADRLLDECFAIVERIAMVPPETVK
                     LNLQLATMGMQMMGFKDAWTMDGQLSAAAHTLLREELRRPLDEKRKAEGTKAYLQMRD
                     GPFQPEPFGPRAKRRD"
     gene            complement(2014..3018)
                     /locus_tag="VLM90_09840"
     CDS             complement(2014..3018)
                     /locus_tag="VLM90_09840"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13312.1"
                     /translation="MFKAKNFVGNSLIVISLFLIPEVRASARLEPLTVAYSNFTGTYA
                     PLWVAVDENLGAKYGLDLKAIYAGRIRPQQLLATGEVPIVLATATGTITSHILGVKDH
                     VLVATITNKVGTSIFARGDIKTVEDLKGKTIATGRPGAFLDATVRYVLRSKFNLIPDR
                     DVKLLPTGEPSLGLQALERGVVEAAAMSSPYMFVARKAGFRELASFDKLGVEYPYTSV
                     VVLRQTVVKSPDLIERFLKTIVEGIYVFKTNKAKTMAAFKRHMKGADDEILEATYQHS
                     RATLEDAPHPTLQSVKVALEMLALQYPQAKQTDPNPIVEPPFMKKIEDSGFIRALQKK
                     "
     gene            complement(3303..4196)
                     /locus_tag="VLM90_09845"
     CDS             complement(3303..4196)
                     /locus_tag="VLM90_09845"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSQ13313.1"
                     /translation="MAQSTDDIFRVTLLGTGAPPPRLDRFGPSTLVEVGKQKFIFDAG
                     RGAMQRLHQLAIPFSDITGLFLTHHHSDHVVGFPDLWLTGWIGRPWGQRAQPLPVYGP
                     VGTRQMMEHLPLAFHVDICVRSRSYPPEGVKLDAREIRQGLVFDHDGVKVSAFEVDHG
                     GEELPAYGYRIDYQGRSAVLSGDTTFNENLIHHAQGVDLLVHEVTAAAGSAAENPQQL
                     KRIGANHTTPEQAGEVFARVRPKLAVYNHLLLFGSAQPEDLLPATRKKYDGPLIVGSD
                     LLQIEIGSEILATPFQSKLGQ"
BASE COUNT          911 a         1344 c         1228 g          943 t
ORIGIN      
        1 agaatagaga cagagtaatg gcaagcatca aagcaaactt cgagtatccc attaccatct
       61 cccttccaat ccgaagcgat ttgaacgttt tgaactattt gaacggcttg aacgaatcct
      121 acttatttcg ttttatcgcg aaacggcgca tcccgagttg caaaaaatgc tttccacccg
      181 ccctgctggc gcgcctcttc cagcggttga taaaattctt cccggcgcga caactgcgcc
      241 agcgccgaca gctcggcatt gagcgaccag gccttgccga gacccatcat ctcgtaaccc
      301 gaggtggctt tctgcaaatt gatcttcacg gtgtccggcg gcaccaaagc gacgcgctcg
      361 accagccgga agcactcgtc gagcagccga tctttcgcca cgactttgtt gaccaggcgc
      421 aggcgcagcg cttccttggc gtcgacacta tcgccggtga ggccatagcg cacagcgttc
      481 ttaaatttcc ccagcaccgt ccagataaag tccgtgccat cgctatggcg tacctggggt
      541 tggccaaaca tggcatcatc cgcggcgatc gtcagatgag acgacaacgc cagccaggac
      601 gccgaaccga gacaccaacc gctcaccgcc gcgatgatcg gtttgggaaa ctgccagcga
      661 tagagctgct cgtcgatttt ttcctgccgc gcccggtcac gcagccgatt ataaacatct
      721 cccaacgcgc tgccttcggc aataccataa ggccacaccg gcttaccgac tagcgactcg
      781 ttcatgtcgt cgccgctgga aaaaaaccca ccggcaccgg tgagcaccac ggcacgaatc
      841 gcttcgtcgt cgcgcgccaa ctccaacgcc gcccgcaact cgtctttcat ctttcggtta
      901 agcgcattgc gcagcgccgg ccggttgagc gtgatcaaca cgccgcggcg ctgtttctcg
      961 aatagaatcg tttcaaagtt ggtcacaaat tttttctttc aatctccccg gagttcaagc
     1021 cgttcaaaaa gttcaaatcg ttcaagtcgt ctcggaggtt atcggagcct gctcctccga
     1081 cattttgaac gatttgaacg gattgaacgt tttgaaccag cggcgcgctt aatcgcgccg
     1141 cttggcgcgt ggcccaaacg gttccggttg aaacggccca tcgcgcatct gcaaataagc
     1201 tttggttcct tcggcctttc ttttttcatc gagcggccgg cgcagttcct ctcgtagtaa
     1261 tgtatgcgcc gccgccgaca gttgcccatc catcgtccag gcgtctttga agcccatcat
     1321 ctgcatgccc atggttgcca attgcaaatt gagcttcacg gtctcgggcg gcaccatggc
     1381 gatgcgctcg acgatggcga agcactcgtc gagcagccgg tcggcgggca ccacttgatt
     1441 gaccaggccg atgcgcagcg cttccagggc gtcgatgtgg tcgccggtga gcgagtagcg
     1501 cagaccgtct ttgaagccgg cgagcaaggt ccagatgaat cccgtattgg agccgtggcg
     1561 cacttccggc tgggcgaaca ccgcctgttc ggacgcaatg gtgatgtggg taaacaatga
     1621 catccacgag cccacgccca tggcccagcc gttgatcgcg ccgatgaccg gttttggaca
     1681 ctcgaagata cgcatgaaga tcgcttcatg gccgcgatag ttgtcgatga agtccgccgc
     1741 gctctcgccg gcgcgcacgc cgtagggcca gtccatgtcg cgccggtgcg ccgcgccgcc
     1801 gccctggtcc atgccggtgg aaaatgccct gcccgagccg gtgaggacga tggcgcgcac
     1861 ttgcgcatcg gcgacggcat cgtcgagcgc cgcgccgagc ttgtgcaaca tcggccgggt
     1921 tgccgcgttc atcgccgccg gccggttgag ggtgatcagc acgccctggc gctgtttgtg
     1981 atagagaatc tcgtcgctgt cggccatcgc gttttacttc ttttgcagcg cccggataaa
     2041 gccgctgtct tcgatcttct tcatgaacgg tggttcgacg atgggattcg ggtcggtctg
     2101 cttggcttgc ggatattgca gcgccaacat ttccagcgcc actttcaccg actggagggt
     2161 cggatggggc gcatcttcca aagtcgcgcg gctatgctgg taggttgctt cgaggatctc
     2221 atcgtcggcg cccttcatgt ggcgcttaaa ggccgccatg gttttcgcct tgttggtttt
     2281 gaagacataa atgccctcga cgatggtctt taagaagcgc tcgatcaagt ccgggctctt
     2341 caccaccgtt tgacgcagca ccaccacgct ggtgtaaggg tactcgacgc ccaacttgtc
     2401 gaagctggcc agctccctga agcccgcttt gcgcgcgaca aacatatacg ggctcgacat
     2461 cgccgccgct tcgaccactc cccgctccag ggcctgcaaa ccgagggatg gctcgccggt
     2521 gggcaacagt ttgacatcgc ggtccggtat cagattgaat ttgctccgca gcacgtagcg
     2581 cacggtcgcg tccaagaacg ccccgggccg gccggtggcg atggtcttgc ctttgagatc
     2641 ttcgacggtt ttgatatcgc cgcgggcgaa tatcgacgtg ccgactttgt tggtgatcgt
     2701 cgccaccaag acgtgatctt tcacgccgag tatatgcgag gtaatcgtcc cggtcgcggt
     2761 ggcgagcacg atcggcactt cgccggtggc gagcaactgc tgcggccgaa tcctcccggc
     2821 gtagatcgct ttcaaatcca agccatattt agcgccgagg ttctcgtcga cggccaccca
     2881 gagcggcgca taggtgccgg taaaattgga gtaagcgacg gtcaatggtt cgaggcgcgc
     2941 agacgcgcga acctcaggga tcagaaacaa cgagataact atgagagagt tgccgacaaa
     3001 gtttttggct ttaaacatgt gccttccaaa cgacaagcaa ttatccttgc cggttatcac
     3061 tgtagtcgga tttagtcaat gtaaagcgcg gcgaaaaatc gtccgcatac gttacacctt
     3121 ctcttatcag caaacacatt tcagtaatca ttttaaaaat aaccgcgcgc agcaatctgc
     3181 agcatcggaa ctcggcgatg aaatttattt taaaccgact ccatttggac atttttatcg
     3241 gcagtccgct cacaggagcg ctaccagact cgcgtctcgg aatactggcg gcgctgccgt
     3301 gttcactgac caagcttgga ttggaacggt gtggcgagaa tctcgctgcc gatctcgatc
     3361 tgcagcaagt ccgatccgac gatcaacgga ccgtcatatt tttttcgcgt ggctggcagc
     3421 aaatcctccg gctgcgcgct gccgaacagc agtagatgat tgtaaaccgc cagcttcggc
     3481 cgcacccgcg cgaatacctc tccggcctgc tccggcgtcg tgtggttggc gccgatccgt
     3541 tttagttgct gcggattctc cgccgcgctg ccggccgccg cggtcacctc gtgcaccaac
     3601 aagtcgacac cctgagcgtg gtgaattaag ttttcgttga acgtggtgtc gcccgacagc
     3661 accgccgagc gcccttggta atcgatgcgg taaccatagg ccggtaactc ttcgccgcca
     3721 tgatcgacct cgaacgcact gaccttgacg ccgtcatggt cgaacaccag gccttggcgg
     3781 atctcgcgag cgtccagttt aacgccctcc ggcggatagc tgcggctgcg cacgcagata
     3841 tcgacatgaa aggccagcgg caagtgctcc atcatctgcc gcgtccctac cggcccgtag
     3901 accggcaacg gctgcgcgcg ctgcccccaa ggccggccga tccagccggt gagccagaga
     3961 tcgggaaagc cgacgacatg atccgagtga tgatgggtga gaaaaagccc ggtgatatcg
     4021 ctaaacggaa tggccaattg atggagccgc tgcatcgccc cgcgaccagc gtcgaaaata
     4081 aacttctgct tgccgacttc gaccaatgtg ctcggcccaa aacgatccaa gcgcggcggc
     4141 ggcgcgccgg tgccgagtaa cgtcacgcga aatatatcgt cagtggattg cgccatcgac
     4201 tgctcctaca gaggatttga attcactacg aacggttacc cgggcccccg cggcaatcga
     4261 gattcggaat atctcgcgcc aagcacgcta agggcgcaaa ggaaaatagg gctatgtcat
     4321 ttcgaccgat agggagaaat ccatcttaga tccctcgcat tcgctcggga tgacaggcct
     4381 ctaacctgtc acttagcctt tgggggatga ttttcccaat gctcgg
//
LOCUS       DATIRS010000780         1978 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1924689, whole genome shotgun sequence.
ACCESSION   DATIRS010000780 DATIRS010000000
VERSION     DATIRS010000780.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1978)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1978)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1978
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1924689"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..499
                     /locus_tag="VLM90_09850"
     CDS             <1..499
                     /locus_tag="VLM90_09850"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ13314.1"
                     /translation="VAAGFLLAILPLSTALAAPLSGRLADRFDASSVAVVGIGLIVAG
                     IASYACLGVDADFALVGAVLALLGAGIGFFTPANQKLAFASVAKEDYGVLAAMLSSFG
                     TAAGTVGTTIAVALMEVSGGDEIWQSQAVFAGAQQFAFAWLVPIGLVAIVMALRARSR
                     ASEIT"
     gene            520..1488
                     /locus_tag="VLM90_09855"
     CDS             520..1488
                     /locus_tag="VLM90_09855"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13315.1"
                     /translation="MVVDFQHHYIPVELAKKRGLYSDTGRTLLQEGGLPATTMHQRLY
                     DLELQLQDMAEAGVDVSVLSCLLGWSAPLDECRFINDDLAAIEKKYPRHFVGLAQAPV
                     LEGTTAIAELRRALADLGLRGMTITSQVGGLSLDSPKLYDLYELACELDAPVFVHPAL
                     VPTGYEHLKDYDLPRVLGREVDLTVATTRLIAGGIYDRYPDLKIVMAHFGGGIAAVKD
                     RLVAKGYRFGTLKKPFGEYYDMVYFDMAGFEGGTIALNCALEGIRPERLVFASEYPQD
                     FTGVNTDTGKGMSELRNYVEAVRRLPLSEKHREDMLGGTAARLLKF"
     gene            complement(1513..>1978)
                     /locus_tag="VLM90_09860"
     CDS             complement(1513..>1978)
                     /locus_tag="VLM90_09860"
                     /inference="COORDINATES: protein motif:HMM:NF019844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HSQ13316.1"
                     /translation="AASPDDLPDLNKQIRPYVTIENTKVRSGPGPQYRGIADIPDNAK
                     IHVVGRDGDWALIVSKKGNAPGFVELAAIKPGESEKPEYGEPRRIEGRYEAMTNTQVR
                     GGPGLHYPALAEIAKGTKLNVVDEEKGWLKVESKRGNKPGYVEASLAKPVNE"
BASE COUNT          336 a          554 c          630 g          458 t
ORIGIN      
        1 cgtagccgct gggtttctgt tggcgatctt accgctgtcg acggcgttgg cggcgccgct
       61 gagcggccgc ttggccgatc gcttcgatgc ctcgtcggtg gcggtcgtcg ggatcggttt
      121 gatcgttgcc ggcatcgcca gctacgcctg cttgggtgtc gatgccgatt ttgcgttggt
      181 cggcgcggtc ttggctttgc ttggcgccgg catcggattt tttaccccgg ccaatcagaa
      241 gctcgccttc gcttcggtcg ccaaggagga ctacggtgtt ttggcggcga tgttgagctc
      301 cttcggcacc gccgccggga ccgtcggcac aaccatagcg gtggcgctga tggaggtttc
      361 cggcggtgac gagatctggc aatctcaagc ggtgttcgcc ggcgcgcagc aatttgcatt
      421 tgcctggttg gtgccgattg ggttagtagc catagtcatg gcattgcggg ctcgatcacg
      481 cgccagcgaa atcacctgag cggacgaaag gaagcagaaa tggttgtcga ttttcaacat
      541 cactatattc cagtcgaact ggcgaaaaag cgcggattgt attctgacac gggcagaact
      601 ttgctgcagg aaggcggatt gccggcgacg accatgcacc agcggcttta cgacttggag
      661 ttgcagctcc aagacatggc cgaggcgggc gtggatgttt cggtcttgtc ttgtctgctc
      721 ggctggtcgg cgccgctgga tgaatgccgc ttcatcaacg acgatctggc ggcgatcgag
      781 aaaaaatatc cacggcactt tgtcggcttg gcgcaagcgc cagtgctgga ggggacaacc
      841 gccatcgccg aactgcgccg ggcgctcgcc gacttggggc tgcgcggcat gacgatcact
      901 tcacaggttg gcggtctctc cctcgactcg ccgaagcttt atgatttgta tgaattagcc
      961 tgcgagctcg atgcgccggt gttcgtccat ccggccttgg tgcccaccgg ttacgagcat
     1021 ttaaaggatt atgatctgcc gcgggttttg ggccgcgaag tcgacttgac cgtggcgacg
     1081 acccgcttaa tcgccggtgg gatttacgac cggtatccag acttgaaaat cgtcatggcc
     1141 cacttcggtg gcggcatcgc cgcggtgaag gataggctgg tggctaaggg ttaccgcttc
     1201 ggcacgctca aaaaaccctt cggcgaatat tacgacatgg tctatttcga catggccggc
     1261 tttgagggcg gcaccatcgc gctcaactgc gccctcgaag gcatccgccc cgagcgtctg
     1321 gttttcgcca gcgaatatcc gcaggacttc accggggtta acaccgacac gggaaaagga
     1381 atgagcgagc tgcgcaacta tgtcgaagcg gtgcgcaggt tgccgctcag cgagaagcac
     1441 cgtgaagaca tgctcggcgg cacggcggca aggttgttga agttttagtg gcgccgaggg
     1501 attccggcgc gactattcgt ttaccggctt agccaaactc gcctcgacgt agccgggttt
     1561 gttgccgcgt ttggattcga ctttcaacca gcctttttct tcatcgacga cgttaagctt
     1621 ggtgccttta gcgatctcgg ccagggccgg atagtgcagt cccggaccgc cgcgcacctg
     1681 ggtattggtc atcgcctcgt atctaccttc gatccggcgc ggttcgccgt attccggctt
     1741 ttcgctttcg ccaggtttga tcgccgccag ttcgacaaat cctggagcgt tgcctttctt
     1801 cgagacgatc agcgcccagt cgccgtcgcg gccgacgaca tggatcttgg cattgtccgg
     1861 aatgtcggcg atgccgcgat actgcggccc cgggccgctg cgaaccttgg tgttctcgat
     1921 ggtgacgtaa gggcggattt gcttgtttag gtcgggaaga tcgtcggggc tcgcggct
//
LOCUS       DATIRS010000781         4529 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1630927, whole genome shotgun sequence.
ACCESSION   DATIRS010000781 DATIRS010000000
VERSION     DATIRS010000781.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4529
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1630927"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..980)
                     /locus_tag="VLM90_09865"
     CDS             complement(<1..980)
                     /locus_tag="VLM90_09865"
                     /EC_number="4.2.1.84"
                     /inference="COORDINATES: protein motif:HMM:NF014973.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0046914 - transition metal ion binding
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrile hydratase subunit alpha"
                     /protein_id="HSQ13317.1"
                     /translation="MSGKHGHKPFEGHMHDYLAHVKAVEEDLEYYRAKRFEPRIFYLL
                     RRNVVTFYDLLKVRSTLKKKDHFFKISKPQGKNVEARVRYLEEWLDEYVKGIALVSAR
                     TVEGMDMVTEDNRKERGDYDDFFKIKKKEHHGTLEERMVSVEQDLNDYQELLEVFVQA
                     LIQRGWATREDLAQRWKQLHEERPWAGGVIVAKAWTDAAFKKALLDTGREALREMGVH
                     QGKVGKLVVVENTEKTHNVVVCTLCSCYPYDILGDTPWWYKHESYRTNIVQNPRACMK
                     DMFQLEFPRDKELRVWDSTSDVRYFVLPQRPAGSDGMSEQELAKLVTVDS"
     gene            complement(1007..2722)
                     /locus_tag="VLM90_09870"
     CDS             complement(1007..2722)
                     /locus_tag="VLM90_09870"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF012913.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase domain-containing protein"
                     /protein_id="HSQ13318.1"
                     /translation="MADTGSEAKPRIAVFSGPTATIQNSEPLVTSNKARERYGLPVRT
                     HKDGSPMRFDVLRAQRLAAPVTVYVEQFSAHPLERDHAELYAPPDGYLDAAGIFHKQR
                     AGADDKPVYEITLKPEDGLYPFPYMARQANGQPWEMDGTEKNIPADRVRVPFFPDGAR
                     LFEEIDRLGISDEGVGCLLTGKADFDFYRALPSGGYVTGRRESERTDIGAGDIPAEIR
                     GNDFFPYRPGYLRKEPPMAALARLTNVVQQALGSGRYAGGIWLEGSPFVEETTYWLNL
                     LIDTTVPIVGNSSQRPHGAIGNDGDRNIVDSVDYITSKIWADDNGRDCIGAVAILDEQ
                     IFTARDVQKADARPGGYIATGGHGGIIGRMGHPGAPQFSFKPIKRHTHHSLVNLRQMP
                     KDVQGSRVQGSTIGIIAVPIKETTGELLAAAIPKVTIVKHARYLPEDTSGNASSEVDI
                     LARIENNLRMAPLAGFVAEGSAPFGAMSNSVDAALKRATFSGMPVVKVGRGNASGFVD
                     ATRDPLAIAGSNLTATKARLLLMACLMKFGCLPPAADPAQPTQAETDAAKAKLKQYQE
                     IFDSH"
     gene            complement(2763..3341)
                     /locus_tag="VLM90_09875"
     CDS             complement(2763..3341)
                     /locus_tag="VLM90_09875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13319.1"
                     /translation="MSAVQKFIASARQLHAEETDPAKRWEKMTPLLGELIADPAVREQ
                     SKHWPDCSQGGERAENLLFYEDPDYKFVINGLIKAPHTRTAIHDHAHNWTLYGVLDGS
                     ESIERYERVDDQSKPDYAEVRKSVNVKVSAGKIDLVPPYAIHAEESGDERTVAIIVRA
                     EKAGGFLQGRYDPATNKYWQGYGPKQLPFALK"
     gene            complement(3521..>4529)
                     /gene="ahcY"
                     /locus_tag="VLM90_09880"
     CDS             complement(3521..>4529)
                     /gene="ahcY"
                     /locus_tag="VLM90_09880"
                     /inference="COORDINATES: protein motif:HMM:TIGR00936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004013 - adenosylhomocysteinase activity
                     [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HSQ13320.1"
                     /translation="AASLVKHDKIPTYAIKGEDNKSYYRHLRAALDHKPVITMDDGAD
                     LVSLLHTGYAHLLPNLVASMEETTTGVIRLRALEKDGALKIPVIAVNDAATKHLFDNR
                     YGTGQSTIDGVIRATDMLIAGKRVVVAGYGWCGKGVASRARGMGAKVIVTEVDPIRAL
                     EAAMDGLEVMTMKEAARVGDLFITLTGDMHVIAEEHLKVMKNGAVVCNSGHLDIEIDI
                     KALTKMATRVEKNVRNFVDAYVLPGGRRIYLIGEGRLVNLAAAEGHPASVMDMSFATQ
                     ALASEWAVKARKTLTPKVYDVPVAVENWVAKLKLGSMGIRIDNLTKEQQHYLTSWDHG
                     T"
BASE COUNT          908 a         1338 c         1232 g         1051 t
ORIGIN      
        1 aaactatcga cggtgacgag cttggccaat tcctgttccg acatgccatc gctgccggcg
       61 gggcgttgcg gcaagacaaa gtagcgcacg tctgaggtgc tatcccaaac ccgcagttct
      121 ttatctctgg gaaactcaag ctgaaacatg tccttcatgc aggcgcgcgg gttctgcacg
      181 atgttggtgc ggtagctttc gtgcttgtac caccacggag tatcgccgag gatgtcgtag
      241 ggataacagg aacataaggt gcagacgacg acgttgtgcg tcttttcggt attttcgaca
      301 accaccagtt tgccaacctt gccctggtgc acgcccattt ctctgagcgc ctcgcggccg
      361 gtatcgagca aggctttttt gaatgccgcg tcggtccacg ccttggcgac gattacgccg
      421 ccggcccagg gccgttcttc gtgcaattgc ttccagcgct gtgccaaatc ttcccgcgta
      481 gcccagccgc gctggatcaa ggcttggacg aatacttcca gcaactcctg gtagtcgttt
      541 agatcttgtt ccacgctcac catgcgctct tcgagggtgc catggtgttc cttcttttta
      601 atcttaaaaa aatcgtcata gtcgccgcgc tccttgcggt tgtcctcggt gaccatatcc
      661 atgccttcga cggtgcgcgc tgaaaccaag gcgatgcctt tgacatactc atcgagccat
      721 tcttccaaat agcgcacccg cgcttcgacg tttttcccct ggggcttgct gatcttgaag
      781 aaatgatctt tcttcttgag cgtcgagcgc accttaagca aatcgtaaaa cgtcacgacg
      841 ttacgccgca gtagatagaa aatccgcggc tcgaagcgtt tggcccggta atattccagg
      901 tcttcttcga cggctttaac atgcgccagg taatcgtgca tatggccttc gaacggcttg
      961 tgcccatgtt ttcctgacat cgaatattcc tccgagtctc ggccctttag tggctatcga
     1021 aaatctcttg gtactgtttt aacttcgctt tggcggcatc ggtttccgcc tgagtcggtt
     1081 gggctggatc ggccgccggc ggcaagcaac cgaacttcat caaacaagcc atcaatagca
     1141 gccgtgcctt ggtcgcggtc aaattactgc cggcaatcgc caacggatcg cgcgtggcat
     1201 cgacaaaacc gctagcattg ccgcggccga ctttgaccac cggcatgccg ctgaaggtcg
     1261 cgcgctttaa cgccgcatcc accgaattgc tcatggcgcc aaagggcgcc gagccctcgg
     1321 ccacaaagcc ggcgagtggc gccatgcgca gattgttttc aatgcgcgcg agaatatcga
     1381 cttcgctgct cgcgttcccc gaagtgtcct caggcagata acgcgcatgc ttgactatcg
     1441 tcaccttggg aatcgccgcc gccagcaatt cacctgtggt ctccttgatt ggcaccgcga
     1501 tgatgccgat cgttgaacct tgaacccttg aaccttgaac atcctttggc atttggcgca
     1561 ggttcaccag cgagtgatgc gtatgccgct tgatcggttt gaaagaaaac tgcggcgcac
     1621 cgggatggcc cattctgccg atgatgccgc catgaccgcc cgtggcaata taaccgccgg
     1681 ggcgagcatc ggctttttgc acatcgcgcg cggtaaaaat ctgctcgtcg aggatcgcca
     1741 ccgcgccgat acagtcgcgg ccgttgtcgt cggcccaaat tttcgacgtt atataatcca
     1801 ccgaatcgac gatgttgcgg tcgccgtcgt tgccgatggc gccatgggga cgctgcgagg
     1861 aattaccgac aatcggtacg gtcgtgtcga tcaacagatt gagccagtag gtggtctcct
     1921 cgacgaaggg actgccttca agccatatcc cgccggcata cctgccgctg cctaaagctt
     1981 gctgcacgac gttggttaac cttgctagcg ccgccatggg cggctctttg cgcagataac
     2041 cggggcggta ggggaaaaaa tcgttgccac gaatctcggc aggaatgtcg ccggcgccga
     2101 tatcggtacg ttcgctctca cgccgccctg tcacgtaacc acctgacggc aaggcgcggt
     2161 aaaagtcgaa gtccgctttc cccgtcagca ggcaacccac cccttcgtct gagattccta
     2221 atcggtcgat ctcttcgaac aagcgcgcgc catcgggaaa gaacggcacg cgaacccgat
     2281 cggctggaat atttttctcc gtgccgtcca tctcccatgg ctgtccgtta gcttgccgcg
     2341 ccatgtaggg gaacggatag aggccgtctt caggtttgag cgtaatctcg taaaccggtt
     2401 tgtcgtcggc gccggcgcgt tgtttgtgaa agatacccgc cgcgtcgaga taaccgtccg
     2461 gtggcgcgta aagctcggcg tgatcgcgct cgagcgggtg ggcgctgaat tgctcgacat
     2521 aaacggtcac cggcgccgcc aagcgttgcg cgcgcagcac gtcgaaacgc atcggcgagc
     2581 cgtctttgtg ggtgcgaaca ggtaggccgt acctttcacg cgccttgttg ctggttacca
     2641 acggctcact gttttgaatc gtcgccgtcg gtccggaaaa aaccgcgata cgcggtttcg
     2701 cctcgctgcc tgtgtcagcc atcatgaact cgctgatata gaatgagtaa aatgaacgat
     2761 tctcatttaa gcgcaaacgg cagctgctta ggcccgtagc cctgccaata tttgttggtc
     2821 gccgggtcgt agcgtccctg gaggaaaccg ccggcctttt cggcgcggac gataatcgct
     2881 acagtccgct catcgccgct ctcctcggcg tgaatcgcat agggcggcac caggtcgatc
     2941 ttgcctgcac tcactttgac gttgaccgat ttacgcacct cggcgtagtc aggcttcgac
     3001 tggtcatcga cgcgttcata acgctcaatg gattcggaac cgtcgagcac gccgtatagc
     3061 gtccaattat gcgcgtggtc gtggatcgcc gtgcgcgtgt gcggcgcctt gatcaaaccg
     3121 ttgatgacga atttgtagtc gggatcctca tagaaaagta agttctcagc gcgctcgccg
     3181 ccctgagaac aatccggcca atgcttcgac tgttccctca ccgccggatc ggcgatcagc
     3241 tcccccagga gaggggtcat cttctcccag cgttttgccg gatcggtttc ttcggcgtga
     3301 agctggcgcg cggacgcgat aaacttttgt actgcagaca tcggttcctc cttcagcata
     3361 atgcctattt ttgtcaacta gcgaattatt agtccgatga gatactactc gtcaagctgt
     3421 gctaaagaat ttcaaattac agatgccaaa ttccaaaata aaaaaggctc cgccagcgat
     3481 cacgctgtcg gagcctttta cacggattgg caaatcgaac ttacgtgcca tggtcccaag
     3541 atgtcaggta atgctgctgc tctttggtga ggttgtcgat gcggatgccc atcgagccga
     3601 gtttcaactt ggcgacccag ttctccaccg ccaccggcac atcgtaaact ttaggcgtga
     3661 gagtcttccg ggcttttacc gcccactccg aggccagcgc ctgagtcgcg aagctcatgt
     3721 ccatgaccga agccggatgg ccttcggccg cggctaggtt caccagtcgg ccttcgccga
     3781 tcaagtaaat tctccggccg cccggcagca cgtaggcgtc gacaaagttg cgaacatttt
     3841 tctcgacccg ggtcgccatt ttggtcagcg ccttgatgtc aatctcgata tctaaatggc
     3901 cggagttaca gaccaccgcg ccgtttttca tcactttgag atgttcttca gcgatcacat
     3961 gcatgtcgcc agttaaagta ataaagagat cgccgacccg cgccgcttct ttcatggtca
     4021 tcacctcgag tccgtccatg gcggcttcca acgcgcgtat cggatcgact tcggtgacga
     4081 tcactttggc gcccatgccg cgggcccgcg acgccacgcc cttgccacac cagccgtagc
     4141 cagcgacgac tacgcgtttg ccggcgatca gcatatcggt agcacgaatc acgccatcga
     4201 tggtcgactg gccggtgcca tagcggttgt cgaacaggtg cttggtcgcg gcgtcgttga
     4261 cggcgatgac gggaatcttc aacgcaccgt ctttttccaa agcgcgcaaa cgaatcacac
     4321 ccgtggtggt ttcttccata ctcgccacta agttaggcag caaatgagcg tagccggtgt
     4381 gcagcagcga aaccaaatcg gcgccgtcat ccatagtaat gaccggctta tgatcgagcg
     4441 cggcgcgcag atggcgatag taggacttgt tatcttcgcc tttgatcgcg tatgtcggaa
     4501 tcttgtcgtg cttgaccagc gatgcggcg
//
LOCUS       DATIRS010000782         2122 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1434476, whole genome shotgun sequence.
ACCESSION   DATIRS010000782 DATIRS010000000
VERSION     DATIRS010000782.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2122
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1434476"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            253..768
                     /locus_tag="VLM90_09885"
     CDS             253..768
                     /locus_tag="VLM90_09885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13321.1"
                     /translation="MITKPRPFKRGNRANFNFAMALRSIGQDLERRGLKTFDIRFDGE
                     EFVALCGYQGPPAGTPVELKYCPGDIEEMDRAGEIRRGKMAPPKDFLNQPQVFRTIGE
                     FLDRNEAKLVRLSNNDRRVKELTFIVEYLSHDGERVIDDRAGAAIYDMCVAMYKQRGR
                     LTGTEGRRRSK"
     gene            821..1321
                     /locus_tag="VLM90_09890"
     CDS             821..1321
                     /locus_tag="VLM90_09890"
                     /inference="COORDINATES: protein motif:HMM:NF012451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HSQ13322.1"
                     /translation="MDTSVDYYSILGVKPSASVDDIKRAYRQMVFRFHPDRNPDSPEA
                     ADKFTQVRDAYAVLSDALKRRVYDGVKHPAGAEESDEPAEEESSEKEQPASSRGKSSG
                     SANFSQEFKQKVEPEPKCPSCSVVGIDHLISRKGRSASAHGKHFVLAPFNVVLCSACG
                     HVYGIT"
     gene            complement(1381..>2122)
                     /locus_tag="VLM90_09895"
     CDS             complement(1381..>2122)
                     /locus_tag="VLM90_09895"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSQ13323.1"
                     /translation="TIITGAAHGIGKAYARRFAEEGAHVVIADIDASGGEATAKAILD
                     VGGSAWARATDVRSLPNLQGLVRETVNKFGRIDVLLNNAAIYVTQKLWKGPVEDLELD
                     EWDRVIEVNLKGVFLCSKAAIPIMKQQRSGKIINIASGTFFSGSGNMPHYTTAKGGVV
                     ALTRVMARQLGEYGINVNCMTPGSTMSEENVSEDVLKRREGSIDKRAFRRIETPADIV
                     GTALFLASSDSDFVTGQLLVVEGGGVMH"
BASE COUNT          447 a          601 c          619 g          455 t
ORIGIN      
        1 cgctggcacc gagggttgga gcgaggagga tttggccaaa ttggtaaccc gagacagcat
       61 gatcggcgtc atggacgcat tgcccatgct tcctgaataa cctcgctaac ggtcggcact
      121 tccacaaagt tcgaccgcgc agactttagc gatcggcggc gccacctatt aatgaaggcg
      181 gcgccgatct tttttgttga ttttttgccc tactgttctt accattcagt caataagttc
      241 tctttggcaa ccatgattac caaaccgcgc ccttttaaga ggggcaaccg cgcgaatttt
      301 aactttgcca tggcgctgcg cagtatcggc caagatttgg agcggcgcgg actgaagacc
      361 tttgacatcc gtttcgacgg tgaggagttt gtcgccctat gcggctacca agggccgccg
      421 gcggggactc cggtggaatt gaagtattgt cctggcgaca tcgaagaaat ggaccgggcc
      481 ggtgagattc gtcgcggcaa gatggcgccg ccgaaggatt tcctcaatca accgcaagtt
      541 tttcggacga tcggcgaatt tctcgatcgc aatgaagcaa agctggtgcg gttatccaat
      601 aatgaccggc gcgtcaagga gttgacattc attgtcgaat acctcagcca tgacggcgaa
      661 cgcgtcatcg acgaccgcgc tggcgcggcg atctacgaca tgtgcgtcgc catgtacaag
      721 caacgcggca gattgacggg aaccgaaggc cggcgccgct caaagtaatg cattcgaact
      781 tcgggattac agactagaaa actactgaag gcctgcgcaa ttggatactt ccgtcgacta
      841 ctattcgata cttggagtca agcccagcgc ttcggtggac gacatcaagc gcgcctaccg
      901 gcagatggtt ttccgctttc atccggaccg caatccggac agtccggaag cggccgacaa
      961 attcactcaa gtgcgcgacg cctatgcggt actttcggat gctttgaaac ggcgagtcta
     1021 cgatggtgtc aagcacccgg ccggggccga agagagcgac gagccggccg aagaagagtc
     1081 cagcgaaaaa gagcaaccgg cttcgagccg cggcaaatcg agcggtagcg ctaatttttc
     1141 tcaagaattc aaacagaaag tcgaaccgga gcccaagtgc ccgtcgtgct cggtggtggg
     1201 aatcgatcat ttaatctcgc gtaaaggccg ctccgccagc gctcatggca agcatttcgt
     1261 cttggcgccg ttcaatgtcg tgctctgtag cgcctgtggc catgtctacg gcatcacgtg
     1321 aaacaccagc tagccgtctt gccgatcgag cgatcgtaac ttcgtggtgc taagcggacg
     1381 tcagtgcatg acgccgccgc cttcgacgac taaaagttgt cctgtgacaa aatcgctgtc
     1441 cgagctggcg agaaagagcg cggtaccgac gatgtcggca ggggtttcga tgcgccgaaa
     1501 ggcgcgcttg tcgatgctgc cttcgcgccg tttgagaaca tcctcggata cgttttcctc
     1561 gctcatggtc gagcccggcg tcatgcagtt gacgttgatg ccgtactcgc ccaactggcg
     1621 cgccatgacg cgggtgagcg cgaccacgcc gcccttggcc gtggtgtaat gcggcatatt
     1681 ccccgacccg ctaaaaaaag ttcccgaggc gatgttgatg atcttgcctg agcgctgctg
     1741 cttcatgatc gggatcgccg ctttactaca gagaaacacg cctttcaaat tgacttcgat
     1801 gacgcggtcc cattcgtcga gctctaaatc ttccaccgga cctttccaga gtttctgcgt
     1861 gacgtagatc gccgcgttgt tgagcagcac gtcgatgcgg ccgaatttgt tcacggtctc
     1921 gcgcaccaac ccttggaggt tgggcagact acggacgtcg gtggcgcgcg cccaggccga
     1981 gccgccgacg tcgaggatcg cctttgctgt cgcctcgccg ccgctggcat ctatatcggc
     2041 gatcaccacg tgggcgcctt cttcggcgaa gcggcgggcg taggctttgc cgatgccatg
     2101 agcagcgccg gtgatgatcg tg
//
LOCUS       DATIRS010000783         1608 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_155255, whole genome shotgun sequence.
ACCESSION   DATIRS010000783 DATIRS010000000
VERSION     DATIRS010000783.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1608
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155255"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..499
                     /locus_tag="VLM90_09900"
     CDS             <1..499
                     /locus_tag="VLM90_09900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13324.1"
                     /translation="EYLPVDEKHPSKPQDSSGLSKILGEQIADARVSVQKEMTVSSLR
                     FPGVNFDLVYESFRERWRNPASRASGFWTYIDARDTAVTCRLALEAKFKGHEVFIASA
                     PKNCMIQPTLELVKKYLPKGAKIKKVSGTHWSAVDSTKARRMLRFQPQHVWQDYLQEG
                     QAKRR"
     gene            705..>1608
                     /locus_tag="VLM90_09905"
     CDS             705..>1608
                     /locus_tag="VLM90_09905"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ13325.1"
                     /translation="MAKILLILIATAAWVFSNAGVTMAQSNFYEGKTIRIIVGFSPGG
                     GYDALARMLSRHMPKYIPGHPTILVENMTGAGSLLAASHIFKVAKPDGLTFGHFSGGF
                     AYSQLMAQPGVEFDVQKFVFVGAVARDESAIALTKASGINTMEKWFAAKTPLKLGTTG
                     PGAFGTDNVVKVIKAALNLPIQVITGYKGTADMRLAAESGEIDGTTWGWDSMRGTWQK
                     AIESGTVTIVLQTVPKAFADLLKVPLAIDFAKTAEAKQLIEFGIHYPSKITKTLALPP
                     GTPNDRAQLLQKALQETVKDAEFIA"
BASE COUNT          351 a          463 c          480 g          314 t
ORIGIN      
        1 ggagtatttg ccggttgacg agaagcatcc atcgaaaccg caggactcct ccgggctctc
       61 caaaatcctc ggcgagcaga tcgccgacgc cagggtttcg gttcagaaag aaatgacggt
      121 cagcagcctc cgttttcccg gcgtgaattt cgatctcgtt tacgaaagtt tccgggagcg
      181 ttggcgcaat ccggcgtcgc gggcgagcgg cttttggact tacatcgacg cgcgcgacac
      241 ggcggtgact tgccgcctgg cgctggaggc caagttcaaa gggcacgaag tctttatcgc
      301 ctcggcgccg aagaactgca tgatccagcc gaccttggag ctggtcaaaa aatacctccc
      361 aaagggagcc aaaatcaaaa aagtttccgg cacccactgg agcgccgtcg attccaccaa
      421 ggcgcggcgc atgctgagat tccagccgca acatgtttgg caggattatc tgcaagaggg
      481 acaggcgaag cgccggtaag ctgcaagtcc cactttggat tgctgctcgc ctcatgtaag
      541 gacggcggca atcgtaacat tgcccagcgg caaggcccga tctcgaaaga ggtcgggtct
      601 ttgtgtttct gcttgacggc caggcgtaac atcaactagc tttgggcgag cttttctcag
      661 ggcggcatgg ttacgaactc gaccgattac aaggagacgc ggctatggca aaaatacttt
      721 tgattctaat cgcgaccgcc gcttgggttt tttccaacgc gggcgtgaca atggcgcaga
      781 gcaacttcta cgagggcaag acgattcgta ttattgtcgg cttttctccg gggggcggtt
      841 acgatgcgtt ggcgcgcatg ttgtcgcgcc acatgccgaa atacatcccc ggccatccga
      901 cgattctggt cgagaacatg accggcgccg gcagcctgct cgccgccagt catattttca
      961 aagtcgccaa accggacggc cttaccttcg gccatttcag cggcggtttc gcctacagcc
     1021 agttgatggc gcagccgggt gtggaattcg acgtgcaaaa gttcgtcttt gtcggcgcgg
     1081 tggcgcgcga tgaaagcgcg atagccttga ccaaggcgag cggcatcaac acgatggaga
     1141 aatggtttgc agcgaagacg ccgctgaagc tcggcaccac cgggccgggc gcgttcggca
     1201 cggataacgt cgtcaaggtt atcaaagcag cgctcaatct gccgatccaa gtcatcaccg
     1261 gctacaaggg cacggcggac atgcgcctcg ccgccgagag cggcgagatc gacggcacta
     1321 cctggggatg ggattccatg cgcggcacct ggcagaaggc gatcgagtcg ggcacggtca
     1381 cgatcgtctt gcagacggtg ccgaaagcgt ttgccgattt actcaaagtg ccgctcgcca
     1441 tcgatttcgc caagaccgct gaggccaaac aattgatcga gttcggcatc cactatccga
     1501 gcaagattac caagacgctc gcgctcccgc ccggcacgcc gaacgatcgc gcgcagcttc
     1561 tgcaaaaggc tttgcaggag accgtcaagg acgccgagtt tatcgccg
//
LOCUS       DATIRS010000784         1801 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1335983, whole genome shotgun sequence.
ACCESSION   DATIRS010000784 DATIRS010000000
VERSION     DATIRS010000784.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1801
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1335983"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(70..1122)
                     /locus_tag="VLM90_09910"
     CDS             complement(70..1122)
                     /locus_tag="VLM90_09910"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13326.1"
                     /translation="MAFVSDLIISSDSHVMEPVDLWKKGVSAKYRDSAPLFPPHQVGE
                     GFQQHAGGWDANARMREMEADGLSAEVLYPTLGLDLFGLDDAGLQEECFRVYNDWLID
                     YCSAGPARLIGIPAIAVYNVDNGIKELERCRKAGLKGAIIWQAPHKDIPFTSDHYDKF
                     WAACAELDAPVSLHILTGHSYNKDKNRKGVERYRGSVNLKLMDIANALFELVFCGVLE
                     KNPKLKIVSVENESGWMPWIFQQWDYYYNRFKKENPPAFSRNPSSFVKEQIYACFFND
                     HVCGENLAFWGQDNIMWSNDFPHPNSTWPNSIKIIQRDLGHLPEETQRKVVCDNVCRL
                     YDIDASKLPRVQKQAA"
     gene            complement(1282..>1801)
                     /locus_tag="VLM90_09915"
     CDS             complement(1282..>1801)
                     /locus_tag="VLM90_09915"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSQ13327.1"
                     /translation="LQAIVGTPPFRILDFGCGPGRDLKAFKDLGHEPVGLDGSARFAA
                     MARDLTGCEVWHQDFLTLQLPAAYFDGIFANASLFHVPSQELPRVLRELWATLKPNGV
                     LFSSNPRGDNQEGWNGERFGAYYDWQTWQTLVTSAGFSEIDHYYRPAGLPREQQPWIA
                     SVWRKPDEKKME"
BASE COUNT          362 a          489 c          543 g          407 t
ORIGIN      
        1 tcctagtcgt tcaaatgaaa agggcgggtt ttaaacccgc cccttggttt tagcggttag
       61 ttcggtttac tacgccgcct gcttttgcac gcgcggcagc ttcgacgcgt cgatgtcata
      121 aagccggcaa acgttgtcgc agacgacttt gcgttgggtc tcttccggca gatggccgag
      181 atcgcgttgg atgatcttaa tcgagttcgg ccaggttgag ttgggatgcg ggaaatcgtt
      241 ggaccacatg atgttgtcct ggccccagaa ggccaaattc tcgccgcaga catggtcgtt
      301 gaagaagcag gcgtagatct gttccttgac aaagctgctc gggttgcgcg agaaggccgg
      361 cggattctcc ttcttgaagc gattgtagta gtagtcccat tgctggaaga tccacggcat
      421 ccagcccgat tcgttttcca ccgagacgat ttttagcttg ggattttttt cgaggacgcc
      481 gcagaagacc agctcgaaca gcgcgttggc gatgtccatg agctttagat tgacgctgcc
      541 gcgatagcgc tcgacgccct tgcggttttt gtccttgttg tagctgtggc cggtgaggat
      601 atgcaggctg accggcgcat ctagttcggc gcaggcggcc cagaacttat cataatggtc
      661 ggaggtgaag gggatgtctt tgtgcggcgc ctgccagatg atcgcgccct tcaatccggc
      721 cttgcggcaa cgctcaagct ccttgatgcc gttatcaacg ttataaaccg cgatggcggg
      781 aatgccgatc aggcgagccg ggccggcgct gcagtagtcg atgagccagt cgttgtagac
      841 gcgaaaacat tcttcttgca gaccggcgtc gtcgaggccg aagaggtcca atcctagcgt
      901 cggataaagc acctcggcgc tcaagccgtc ggcttccatt tcacgcatgc gcgcgttggc
      961 atcccagccg ccggcatgtt gctggaatcc ttcgccgacc tggtgtggcg gaaacagcgg
     1021 cgcgctgtca cggtattttg ccgacacgcc ttttttccat aggtctaccg gttccatgac
     1081 atgggaatcg gatgaaatga tcagatcgct gacaaaagcc atatatcgat cctccttgat
     1141 taaacgattg agggatttag ccgcacctta atagatagaa ggtgcggctg tcaattggcc
     1201 aacgacgaac tggagtagtg atggagtaag ggagtggtgg agtgttgggt cccggtcgga
     1261 acccagtact ccaacactcc attactccat tttcttctcg tctggtttgc gccagaccga
     1321 cgcgatccag ggttgttgct cgcgcggcaa gccggcgggg cggtaatagt gatcgatctc
     1381 gctgaagccg gcgctcgtga ccagcgtttg ccaggtttgc caatcatagt aggcgccgaa
     1441 gcgttcaccg ttccagcctt cctggttgtc gccgcgcggg ttggagctga acagcacgcc
     1501 attgggtttc aatgtcgccc acagttctct caagacccgc ggcagctcct ggctcggcac
     1561 atggaacaac gaagcgttgg cgaaaatgcc gtcgaaatat gccgccggca gttgcaacgt
     1621 gagaaaatcc tgatgccaga cttcgcagcc cgttaagtcg cgcgccatcg cggcgaagcg
     1681 cgccgagccg tcgagaccga cgggctcatg gcccagatct ttgaaggcct tcaagtcgcg
     1741 gccggggccg cagccaaagt cgaggatgcg aaaaggcggc gtgccgacga tcgcctgcaa
     1801 c
//
LOCUS       DATIRS010000785         2087 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_155378, whole genome shotgun sequence.
ACCESSION   DATIRS010000785 DATIRS010000000
VERSION     DATIRS010000785.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2087
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155378"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(126..1130)
                     /locus_tag="VLM90_09920"
     CDS             complement(126..1130)
                     /locus_tag="VLM90_09920"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HSQ13328.1"
                     /translation="MRSHPQDQTIYDVLTFGETMLRFTPPARTRIEQTHDFQVHVGGS
                     ESNTAVGLARLGIRTAWLSRLPGSPLGRMVSGELARYGVDVQHVVWCDDARVGLYFLE
                     EAGPPRGSSVIYDRRHSAISRMTPDDLPRQLFAPGSFRAFHTTGITLAISDTAQATAE
                     LAVELAKAAGALISFDVNYRAKLWSPEQAAAGCDRLLQQADLVFIPDRDAQTLFDLPA
                     VDQPESALEQLSARYPQAVFVMTRGRVGSMAIADGNIVEQGIFASDEVGRLGGGDAFS
                     AGFLARCLESQGDITSAMRWGAATSALKYSIPGDLPLMTRSEVERLVASDGSQNSLRR
                     "
     gene            complement(1123..1767)
                     /locus_tag="VLM90_09925"
     CDS             complement(1123..1767)
                     /locus_tag="VLM90_09925"
                     /inference="COORDINATES: protein motif:HMM:TIGR01182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HSQ13329.1"
                     /translation="MKSQVLQLINQHRIVAILRLDDLSQAIAISEALASGGIVVQEFT
                     LTNPDALKVVREVKASLGRRGLATAIGIGSVRNVDEARAALEAGADFIVSPITSRPII
                     EACVKADVAVMPGAVTPTEIASAWDAGADLVKVFPARGLGPNYIKDVLAPMPYLKLMP
                     TGGVDLKNLQSYFAAGAVAAGIGGNLMDATAIARGDWAAVTATALQYAQAARHA"
BASE COUNT          435 a          603 c          620 g          429 t
ORIGIN      
        1 ccatcaactc catcgagcgt tataaatcgt cccacgctaa tgctcaacct ttcatagttt
       61 tcattcacgc gccgaggcgc ggagggatgg gctcgtgtcc cgtcacttcc tagttggttc
      121 tcttgctatc ggcgcagtga attctgactg ccatcactgg cgacgagccg ctcgacttcg
      181 ctgcgcgtca tcaacggcag gtcaccgggg atgctgtact tgagcgccga tgtggcggcg
      241 ccccaccgca tcgcactggt gatgtccccc tgcgattcca ggcaacgcgc caagaaacca
      301 gcgctgaatg catcgcctcc accgagacgc cccacttcat cggaagcaaa aattccttgc
      361 tcgacgatgt tgccatcggc aatggccatc gaaccgacgc ggccgcgcgt catgacgaaa
      421 acggcttgtg ggtaacgcgc gctcaattgc tccaacgcgc tctctggctg gtcgacggcc
      481 ggcaggtcaa agagagtttg ggcatcgcga tcgggaatga aaaccaggtc ggcttgttgc
      541 aacagccggt cgcagcctgc ggctgcctgt tcgggtgacc aaagtttggc gcgataattc
      601 acatcaaaac taatcagcgc tccagccgct ttagcgagct ccactgctaa ctctgccgtg
      661 gcttgggcag tgtcactgat agctaacgtg atacctgtgg tatggaaagc acggaaacta
      721 ccgggagcga atagctggcg aggcaaatcg tcgggtgtca tacggctgat ggccgaatgc
      781 cggcgatcgt agatgacaga gctaccgcgc ggcggtccgg cttcttcgag gaagtacagg
      841 ccgacgcggg cgtcgtcaca ccaaacaaca tgctgaacgt cgacgccata acgggccagt
      901 tcgccactga ccatgcgccc cagcggcgaa ccaggcaaac gcgacagcca ggccgtgcgg
      961 attcctaagc gcgccaagcc aacagccgtg ttcgattcgc tgccgccgac gtgcacctga
     1021 aagtcgtgcg tttgttctat ccgcgttcgc gccggcggag taaagcgcag catcgtctcg
     1081 ccgaaggtca acacatcgta aatggtttgg tcttggggat ggctacgcat gtcgagccgc
     1141 ctgtgcatat tgcagtgccg tggctgtgac agctgcccag tcaccgcgtg caatagcggt
     1201 agcgtccatc aggtttccgc caatgccagc ggccacggct ccggccgcga aatagctctg
     1261 aagatttttt agatcaacgc cgccggtggg catcagcttg aggtagggca tgggtgcgag
     1321 aacatccttg atgtagttcg gtccgagccc gcgcgccgga aagaccttta caaggtcagc
     1381 gccagcatcc caggccgagg cgatttcagt gggcgtcact gcgccgggca tgacggctac
     1441 gtccgcttta acgcaggctt cgatgattgg ccggctggtg atcggtgaca cgatgaagtc
     1501 ggctccggcc tccaacgcgg cgcgggcctc gtcgacattt cgcacgctgc cgatgccgat
     1561 ggcggtcgcc aggccgcggc ggccaagcga cgctttgacc tcacgcacaa cttttaacgc
     1621 gtctggattc gtgagcgtga actcctgaac gacgatgccg ccgctggcca gtgcctcgct
     1681 gatggcgata gcttgagaga ggtcatccag acgcaaaatg gcaacgatgc gatgctggtt
     1741 gataagctgg agaacctgtg acttcatagc gcgactgtag tttggggatc tgcggggttg
     1801 ggagtgcggc ttgaataaaa aagccgagga agtgcaactt tttctgcttg ccgagcgcta
     1861 actgcggcct aagattctac acgcattctt gcagaaatct cagaggcctc acagcttttg
     1921 cgcagtcgtt acaatcgtct cgcgctgtcg tgtctgagcc cgaaaatttt tgcaacgatt
     1981 gaagaaacag catggaggca ttgacgagtc agcggcctgt agcatcaagt gtgaattgtg
     2041 cgacgcacga aatttgtgcg cgatgctaac tagccgttct ctcggat
//
LOCUS       DATIRS010000786         1689 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1827998, whole genome shotgun sequence.
ACCESSION   DATIRS010000786 DATIRS010000000
VERSION     DATIRS010000786.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1827998"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..214
                     /locus_tag="VLM90_09930"
     CDS             <1..214
                     /locus_tag="VLM90_09930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13330.1"
                     /translation="ANQRRESKLVIHFKGTPHNPLSPAEVHAKASKLTRGIFTERQLV
                     KLVNLVEHLEKVADVGQIGDLLRGAR"
     gene            211..1329
                     /locus_tag="VLM90_09935"
     CDS             211..1329
                     /locus_tag="VLM90_09935"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HSQ13331.1"
                     /translation="MKIAAIDGYALILPVKEIYGGAAGYLEDCQTLIIRVETDNGIEG
                     WGEATQGRPGNTYETLETMAIMVRRYFAPALIGMDVEETGAVINQLHGVRSGHPISKA
                     GVETAIYDAVAKFYNLPLYRLLGGPYRRQIELVGGLGMDLGAETIGAKAQQLKQDGYR
                     QFKLKIGHKDLQKDIDRVRAVREVVGGEASIRVDGNASYSFADARELLNALSCYHLSD
                     AEQPLARGDLKSLAELRRVVGVPIAAQESVTSPEDALALLEAGAADLLKIKLTHIGGF
                     RRALQVAAIVGAKALPVVIGQGSACTPILSAAEMHLHAAMNNAQPGGEMTGFLRLGEQ
                     DILSGIELKHARATLTNRAGLGITVNREKLARQAANNF"
BASE COUNT          412 a          461 c          460 g          356 t
ORIGIN      
        1 cgctaaccag cggcgtgaat caaagctggt catccatttc aaaggcacgc cgcacaatcc
       61 actgagcccc gcagaagtac acgccaaagc aagcaaactt acgcgcggga ttttcaccga
      121 gcggcagtta gtgaagctcg tgaatctggt cgagcattta gaaaaagtcg ccgatgtcgg
      181 acaaatcggc gatctgttac gcggcgcaag atgaaaattg ctgcgatcga cggttatgcg
      241 ctgattctgc cggtaaagga aatctacggc ggtgccgccg gctatctcga agactgccag
      301 accctcatca tcagggtcga aaccgacaat ggcatcgaag gttggggcga agcgacccaa
      361 ggacgcccgg gcaacaccta tgagacactg gaaaccatgg cgatcatggt gcggcgctat
      421 ttcgcgccgg cgctaatcgg tatggacgtc gaagaaaccg gcgcggtaat aaaccaactg
      481 catggcgtgc gctcgggtca tcccatatct aaagccggtg ttgaaaccgc catctacgat
      541 gccgtggcga aattttataa cctgccgctc tatcgtctgc tcggcggccc ctaccgccgc
      601 cagatcgaat tggtcggcgg cctcggcatg gatctcggcg ccgagaccat cggcgccaag
      661 gcgcagcagt tgaaacaaga cggttatcgc cagttcaaac tcaagatcgg tcataaagat
      721 ttgcaaaaag atatcgaccg cgttcgtgct gtcagagagg tggttggcgg cgaagcgtcg
      781 attcgcgtcg atggcaatgc cagctattca ttcgccgacg cccgcgagtt gttgaacgct
      841 ttgagctgtt atcacctatc cgacgctgag cagcctttgg cgcgtggcga tttaaaaagc
      901 ttagccgagc tgcgccgcgt cgtcggcgta cccatcgccg cccaggaaag cgtcacctcg
      961 cctgaagacg cgttggcgct cctcgaagcc ggcgccgccg atctgttgaa aatcaagctt
     1021 acccatatcg gcggctttcg acgcgcgttg caagttgccg ccatagtcgg tgccaaagcg
     1081 ttgccggtgg tcatcggcca aggtagtgcc tgcacgccga tcctgtcggc agcggaaatg
     1141 cacctgcacg cggcgatgaa caacgcccaa ccgggcggcg aaatgaccgg cttcctacgg
     1201 ctcggcgagc aagatatttt aagcgggatc gagttgaagc atgcgcgcgc gacactcacg
     1261 aacagagccg gtctaggcat cacggtgaac cgagaaaaat tggcgcgaca agcagctaac
     1321 aatttctagc ggtacaatcg atcatgcttt ccgagtcatt ctgcaatatt gcatagattt
     1381 aaggcatgtg cttgaaaaat aggcatagcc taattgtcga gcatcggcat tgctgcgcaa
     1441 gcagttgata aatctatgaa atttttcatg aacttatggc ataacggttg ctccagagac
     1501 ctgcataagt tatcgaaaac tttctgcgcc taattattct tgcaactaaa cggggaggtt
     1561 cggttgtgaa gcagccaaat aaacttcgtt cattatcact atttcttcta ccagctcttc
     1621 tgacattatt gttgggaact tcgacgcaag ctcaagagac tccgtccgcg tctgccccgg
     1681 caataagcg
//
LOCUS       DATIRS010000787         1628 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_746770, whole genome shotgun sequence.
ACCESSION   DATIRS010000787 DATIRS010000000
VERSION     DATIRS010000787.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1628)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1628)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_746770"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..409)
                     /locus_tag="VLM90_09940"
     CDS             complement(<1..409)
                     /locus_tag="VLM90_09940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13332.1"
                     /translation="MKSGKFLLALTLSMCGVVSLQAQTIDEVYKRALAEGGTLNFYGT
                     LAQINAEIILPAFEKRFPGIKVNHVDATADQLAARIIAESRGGRILADVFQTLLDGVM
                     RIQGQGLFLDRLYPEAAAYPDELKGTGWLATDLI"
     gene            complement(647..>1628)
                     /locus_tag="VLM90_09945"
     CDS             complement(647..>1628)
                     /locus_tag="VLM90_09945"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ13333.1"
                     /translation="KSGIYNCSYHRMEIKSPNRTALYASPRHLWRMYCDYEAQNMETP
                     VATVMGHHPAYHIGACYTGPFEVSEFDIIGGYLQEPLRLTPSETWGDDLLIPADAEIV
                     IEGALIPGKRVVEGPFGEAPGYLGPQRYIRCVEYEVRAINYRKGAMYQSVITPEGDKP
                     WMDLPREGAYLRRCREAVPGVTAVCKLGRQANYNIFISMKKMSEGDPGRAAAAALTFD
                     HAKNVFVFDDDIDVFNPTDVLWAVATRVQPHLQISVTPPIFRGNMLDPSLDDEIKTSC
                     MIVDATKPLDRPFSPVSKCPDEAMARIKLEDFVPGEILQHIPIDRTTYWA"
BASE COUNT          343 a          480 c          462 g          343 t
ORIGIN      
        1 aaatcaagtc ggtggcgagc cacccggtgc ctttgagttc atccggatag gcagccgctt
       61 ccgggtagag tcggtcgaga aacaatcctt ggccctggat ccgcatgacg ccatccagca
      121 aggtttgaaa cacgtcggcg agtatccgtc cgccgcgcga ttcggcgatg atccgcgccg
      181 ccaactgatc cgccgtcgcg tccacatgat tcaccttgat gccgggaaaa cgcttctcga
      241 atgccggcaa gatgatttcg gcattgatct gcgccaaggt gccgtaaaaa ttcagcgtgc
      301 cgccttcggc gagcgcccgc ttataaactt cgtcgatagt ttgcgcctga agggagacca
      361 caccgcacat tgacagcgtt aaggctaaga gaaactttcc acttttcata acaatcctcc
      421 tgttaaggca tcccgtatta gattgagcgg tggccgaact ctatgagagc tgatgcgtac
      481 agccgatgta gcaggtgaaa tcatcgatcg tcaagctggc aagacccctt gttttcaacc
      541 tcacgacacc atggactcgt tcaaaagttc aaggttcaaa agttcaatcg gaagtccgcc
      601 tccggcacag ttgaactatt gaacccttga accttgaacg aataattcac gcccaatacg
      661 tagtccgatc gatggggata tgctgcaaaa tttctcccgg cacgaagtct tccagcttga
      721 ttcgcgccat cgcctcgtcg ggacacttcg acaccggcga aaacggccgg tccagcggct
      781 tggtcgcgtc gacgatcatg caggaagtct tgatctcgtc gtcgagcgac ggatcgagca
      841 tgttgccgcg gaagatcggc ggcgtgacgg aaatctgcag gtgcggttgg acccgagtgg
      901 cgacggccca gagcacatcg gtcggattga aaacgtcgat gtcgtcatcg aagacaaaaa
      961 cattcttcgc gtgatcgaag gtcagcgccg cagcggcggc ccgtcccgga tcgccctcgg
     1021 acattttttt cattgagata aaaatattgt agttcgcctg gcgtccgagc ttgcatactg
     1081 ccgtgacccc cggcaccgcc tcgcggcagc ggcgcaggta cgcgccctct cgcggcagat
     1141 ccatccaggg tttgtcgcct tcgggtgtga tcaccgactg gtacatggcg cccttgcgat
     1201 agttgatcgc tctcacttcg tattcgacgc agcggatgta gcgctgcggg ccgagatagc
     1261 ccggcgcctc gccgaacggc ccctcgacga cacgcttgcc gggaatcagc gcgccttcga
     1321 tgacgatctc ggcatctgcg ggaatcaaca ggtcgtcgcc ccaggtttcc gacggcgtga
     1381 gccgcagcgg ctcttgcaga tagccgccaa tgatgtcgaa ctcgctgacc tcgaacggtc
     1441 cggtgtagca cgcgccgata tgataggcgg ggtggtgccc catcaccgtg gccaccggcg
     1501 tttccatgtt ttgcgcctcg tagtcgcagt acatgcgcca caaatggcgc ggcgaggcgt
     1561 aaagcgccgt gcgattgggc gacttgatct ccatgcgatg gtacgagcag ttgtaaatac
     1621 cgctcttc
//
LOCUS       DATIRS010000788         5714 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_352947, whole genome shotgun sequence.
ACCESSION   DATIRS010000788 DATIRS010000000
VERSION     DATIRS010000788.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 5714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5714
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_352947"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1037)
                     /locus_tag="VLM90_09950"
     CDS             complement(<1..1037)
                     /locus_tag="VLM90_09950"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ13334.1"
                     /translation="MVTDKSYYSRTISAALTACLLNGATVIAANAPMTVAQVALYQGS
                     DREKILIEGAKKEGAMMLYGSHSWYRTMAKEFEKKFPFIKVTEYRTDGRTLIKRAIEE
                     NKAGQYLADIIATTGEQMDMMRREGLFLEHWTPEARFYPDEVKPKSKNGFHYVGHYET
                     YASLGFNTAAITPAEAPKTMLDLLNPKWKGKISIVNTTTGTRWIGNTMENFGREYLEK
                     IAEQEIKVQNMAGAALAGLVVSGEVPLSPTIFDANITQAKQKGAPVEWRPLEPVVTTV
                     AYTGLLAKAPHPYAALLFIDWMHSKEGQQMIMKGGLWSPREDIGSLAQKFKKSYIDEK
                     YGVEEAEKKYA"
     gene            complement(1173..2255)
                     /locus_tag="VLM90_09955"
     CDS             complement(1173..2255)
                     /locus_tag="VLM90_09955"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13335.1"
                     /translation="MFWLRAIQFALLTFCVGSSSFTASRLGAANAPVSAAQIALYQGT
                     DREKLLIEGAKKEGQVVFYNSHTWFKAVAQEFEKKYPFIKVAEWRADGADVMKRVIEE
                     NRAGRFLTDVVESTAGNIGALHKNNLLQEHASPELRFFDDDVVAKGKRGVFYWADRET
                     YISLGFNTTHVAVADAPKRLNDLLDPRLKGKMSLAGGATSARWVGAVVESAGREFIEK
                     LGRHDINVHKLSGAALANLVVTGEVPISPTIFDSNIFVAKRKGAPVEWLPVEPVIANV
                     GYSGIVSNAPHPHAALLLIDYLHSKEGQQFIVKGGLSSPRDDVESLVNQKFKKVYFEA
                     KYSVDEYEKKLSEWEELIQKHFIRKR"
     gene            2461..2802
                     /locus_tag="VLM90_09960"
     CDS             2461..2802
                     /locus_tag="VLM90_09960"
                     /inference="COORDINATES: protein motif:HMM:TIGR02605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HSQ13336.1"
                     /translation="MPLFEYRCGKCAAITEALIQRGESNGGTITCAHCGSAAVTKLLS
                     LVSFKVARRAKYSDEFLDKAKPFLQRQRATAQYFTEGHGSDDSKTFELAEQIGKRIDR
                     TLASQLPTRKN"
     gene            2843..3979
                     /locus_tag="VLM90_09965"
     CDS             2843..3979
                     /locus_tag="VLM90_09965"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13337.1"
                     /translation="MWNGFKVIDSDAHHHEPQDLWARYVEPKFQDRVPRVIGMKRNFF
                     VYAPDQKFSTMLEQGGDYRPNHDQWMADKYGDAYDRWWCPEVRLKDMDRFGWDIQVIL
                     STNGNRIMEAALADAEVGLAMARAYHNWCYDYASADSARLKFTATLAAGDSAGMVVEA
                     RRAVEQLGAVSVRNPLLPKGKWLHEPDYDGLWQLADDLDFPISLHGESRHLRAAPFRE
                     LRAAEIFSALDHIIGFPMDNMVTMAHFIFGGVLERFPKLRLGVLESNAGWANFWLPRM
                     DDHSHGRRLVLGAGLPMKPSEYVKRQCVISADPDEPGLDDVIKFMGDDNLVWNTDYPH
                     PDAPDPDKVLPWFGAQPISDDSKRKILWDNAVRLYGPRLLERAP"
     gene            complement(4032..4973)
                     /locus_tag="VLM90_09970"
     CDS             complement(4032..4973)
                     /locus_tag="VLM90_09970"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ13338.1"
                     /translation="MSTTVLITGANGFIGSHCTKLMESAGHKVVAIDVVPRAPDLTLL
                     GVKATSHLMNVTDSAAFRALCEKERPTHLFHAAHPPRDETPTVLDYCYKAMTNILEAA
                     KDLNIQRVVYSSSASIYGQVNKPDGGLVKEDDAVTIYPTYFYRAAKTVSEWMGNFYQE
                     KHGVDFVALRYSSVYGPGLYRSIPLELKKGILGQPCRPFLTRPLDDLIFVDDVVDGIS
                     RALFTAGPLSKAYNIGLDKAYVSDDLQRAIQKALPSLEFEIGKHPNAAEVAPHRLRSP
                     LDISLARRELGWQPKIYLEDGIARIANWLVENKAKLR"
     gene            complement(5018..>5714)
                     /locus_tag="VLM90_09975"
     CDS             complement(5018..>5714)
                     /locus_tag="VLM90_09975"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13339.1"
                     /translation="SPSNRLTYDLVVRPEIKEAKDLRGKRFGVTSIGGTVWMAAYLAL
                     EHLGLDANRDQIRINAIGNQTILAQAMESAQIDATLLDPFLSRRTKSKGLPVLIELQR
                     AKIPFTNTAWAVSGSFFRERPETAEAVLKAMFEAQAFITAPANRNNVLQIMARHMKLN
                     DLALLEDGYQDLLVGLERKPYAALDGLRNIQRIMSTINPKASHAKVEEIIDNRIVRKL
                     DESGFIDGLYRKN"
BASE COUNT         1107 a         1597 c         1679 g         1331 t
ORIGIN      
        1 tcggcgtatt tcttctcggc ttcttcgacg ccatattttt cgtcgatata ggattttttg
       61 aacttttgcg ccagcgaacc gatgtcttcc cgcggcgacc agaggccgcc tttcataatc
      121 atctgctggc cttctttcga gtgcatccag tcgatgaaca gcagcgccgc gtacgggtgc
      181 ggcgctttgg ccaacaggcc ggtgtaggcg acggtggtga ccaccggctc cagcgggcgc
      241 cattccaccg gcgcgccctt ttgcttggcc tgcgtaatgt tggcgtcgaa gatggtcggc
      301 gacagcggca cttcgccgga gaccaccagg ccggccagcg ctgcgccggc catgttttgg
      361 accttgatct cttgctcggc gattttctcc aggtactccc ggccgaagtt ttccatcgtg
      421 ttgccgatcc agcgggtgcc cgtcgtcgtg ttaacgatgg atatcttgcc tttccatttg
      481 ggattcagca gatctagcat agtcttcggc gcctcggccg gcgtgatcgc cgctgtgttg
      541 aaacccaagc tggcgtaggt ctcgtaatgg ccgacgtaat gaaacccatt cttgcttttg
      601 ggcttaacct cgtctggata gaagcgcgct tcgggcgtcc aatgctcaag aaacagaccc
      661 tcccgcctca tcatgtccat ctgctcgccg gtggtggcga tgatatcggc gagatattga
      721 ccggctttgt tttcctcgat ggcgcgcttg atcaaggtcc ggccgtcggt gcggtattcg
      781 gtaaccttga tgaagggaaa tttcttctcg aactccttgg ccatggtacg gtaccaacta
      841 tgggaaccgt acaacatcat ggcgccttcc ttcttggcgc cctcgatgag aatcttctcc
      901 cggtcggagc cttggtagag ggcgacttgc gcgactgtca tgggcgcatt ggcggctatg
      961 acagtcgcgc catttaacag acacgcggtt aacgccgccg atatcgtgcg gctgtaatag
     1021 ctcttgtcgg taaccatggt ttcttcctct gttagtcggc ttgattccgg cttggttaac
     1081 gtcggcgcag caggttttcc cattggccta gtttcacttc catctcttcc gacgaatact
     1141 tttcgtccat ctagtttttc tgccgaatga aattatcttt ttctgataaa atgtttttga
     1201 atcaactctt cccactcgga tagtttcttt tcgtactcgt cgacggaata tttcgcttcg
     1261 aaataaactt tcttgaactt ctggttgacc agcgactcga catcgtcgcg cggcgagctc
     1321 agaccgcctt tgacaatgaa ctgctggccc tccttggagt ggaggtagtc gatgagcaga
     1381 agcgccgcgt ggggatgggg cgcattgctg acgatgcccg agtagccgac gttggcgatc
     1441 accggttcca ccggcagcca ctcgaccggc gcgcccttgc gcttggcgac gaaaatattc
     1501 gagtcgaaaa tcgtcggcga gatcggcact tcgccggtga ccacgagatt ggccagggca
     1561 gcaccggata gtttgtgaac gttgatgtcg tggcggccga gtttttcaat gaactctcgt
     1621 cccgccgatt ccaccacggc gcccacccag cgcgccgagg tggcgccgcc ggccagcgac
     1681 atcttgcctt tcagcctggg gtcgagcagg tcgttgagcc gcttcggcgc gtcggcaacg
     1741 gcgacatggg tcgtgttgaa gcccaggctg atataggtct cgcggtcggc ccaatagaag
     1801 acgccgcgtt ttcctttggc caccacgtcg tcgtcaaaaa agcgcagctc gggcgaagcg
     1861 tgttcttgca aaagattgtt tttatgcagc gcaccgatgt tgcccgcggt gctttcgacg
     1921 acatcggtga gaaaacggcc ggcgcggttc tcctcgatga cgcgcttcat cacatcggcg
     1981 ccgtcggcgc gccattcggc gactttgatg aatggatatt ttttttcgaa ctcttgggcg
     2041 accgccttga accaggtgtg ggagttgtag aaaaccacct ggccttcttt cttggcgccc
     2101 tcaatgagga gcttttcccg gtcagtacct tggtagaggg cgatctgagc agccgacacc
     2161 ggcgcattgg cggcgcccag gcggcttgcg gtaaagctcg acgaccccac gcaaaacgtc
     2221 agcagagcga actgaatcgc acgcaaccaa aacatcgtca cctccttggt caacttgccg
     2281 gatagccgcg aatttatgga ttgtcgcctt atctgtcaat ccgaaaccga acccctgtac
     2341 gcgacgcgct gaagaaaaag attgtcaact tgggagcccc caagttgaca caacgcgcgt
     2401 tattccaata gtctaaccag agttagatat tgggctgtga aggagtcgct taaatcaaac
     2461 atgccgttat tcgaatatcg ctgtggcaag tgcgcagcca tcactgaggc gctgatccag
     2521 cgcggtgagt ccaatggcgg gaccataact tgcgcgcact gcggcagtgc ggcggtgacc
     2581 aagttgcttt cgctggtgag cttcaaagtc gcgcgccggg ccaagtatag cgacgagttt
     2641 ctcgataaag cgaagccgtt tttgcagagg caaagagcga ccgctcagta tttcaccgaa
     2701 ggccatggct cggacgattc gaagacgttt gagcttgccg agcagattgg caagcgcatc
     2761 gatcggacac tggcgagcca gttgccgacg cgcaaaaact agccgccgcc ggcgcaaatt
     2821 ttgtcgaggg ggggggcgaa ccatgtggaa cggatttaaa gtcatcgact cggatgcgca
     2881 ccaccatgag ccgcaagatt tatgggcgcg ctacgtcgag ccaaaattcc aggatcgagt
     2941 gccgcgggtt atcggcatga agcgcaactt ttttgtctac gcgcccgacc aaaaattttc
     3001 gacaatgctt gaacagggcg gcgactatcg tccgaaccac gaccagtgga tggctgacaa
     3061 gtatggcgac gcttacgacc gctggtggtg ccccgaagtt cgtctcaaag acatggatcg
     3121 ttttggctgg gatatccagg tgattctctc aactaacggc aaccgcatca tggaggccgc
     3181 gctggctgac gcggaagtcg gcctagcgat ggcccgggcg taccacaact ggtgctacga
     3241 ttacgccagc gccgactcgg cgcggctaaa attcaccgcc acgttggcgg ccggcgactc
     3301 agctggaatg gttgtcgaag cgcgccgtgc ggtggagcag ctcggcgccg tctcggtgcg
     3361 caacccgctg ttgcccaagg gtaaatggct gcatgagcct gactacgatg gcttgtggca
     3421 actcgctgat gatctcgatt ttccaatctc gctgcatggc gagtcgcgcc accttagagc
     3481 cgcgccgttt cgcgaactgc gcgccgcgga gatctttagc gctctcgatc acatcatcgg
     3541 ctttcccatg gataacatgg tgacgatggc gcattttatt ttcggcggag ttttagaacg
     3601 cttcccgaaa ctccgcctcg gcgtattgga gtcaaacgcc ggctgggcga atttttggct
     3661 gccccggatg gacgaccact cccatgggcg ccggctcgtc ttgggcgccg gtttgccgat
     3721 gaaaccgagc gagtatgtca aacggcaatg tgtgatctcc gcggatcccg acgagccagg
     3781 cctcgatgac gtcatcaaat tcatgggtga cgataatttg gtgtggaata cggactaccc
     3841 gcacccggat gcgcccgatc cggataaggt gctgccctgg ttcggcgctc aaccgatctc
     3901 agacgatagc aagcgaaaga ttctgtggga caacgcggtc cggctctacg gcccccgcct
     3961 gttggaaaga gcgccgtaac cgcggcggtt tcttgtattt gagacccgcc aaggtattca
     4021 ggataaatgc ctcagcgcag cttcgctttg ttttccacca gccagttggc gatgcgcgcg
     4081 atgccatctt ccaaatatat cttcggttgc catcccagtt ctcttctcgc caacgagata
     4141 tcgagcgggc tgcgcagccg gtgcggcgcg acttcggcgg cgttgggatg tttgccgatc
     4201 tcaaattcca agctcggcag ggctttttga atcgcgcgct gcaaatcgtc actgacgtag
     4261 gctttgtcga ggccgatgtt ataggcttta ctgagcgggc cggcggtgaa aagggcgcgg
     4321 ctgatgccgt cgacgacatc gtcgacgaaa attaaatcgt ccagcgggcg ggtgagaaac
     4381 ggccggcagg gctggccgag gatgcctttt ttcaattcca acgggatgct gcggtaaagc
     4441 cccgggccat agaccgaaga atatctcagg gcgacgaagt cgacgccatg cttctcctgg
     4501 taaaaattcc ccatccattc ggagacggtt ttcgcggcgc ggtagaaata agtcggatag
     4561 atcgtcacgg cgtcgtcttc tttgaccaga ccgccatcgg gtttgttgac ctggccataa
     4621 atcgacgccg agctggaata gaccacacgc tggatattta agtccttcgc cgcttccagg
     4681 atattggtca tggctttgta gcagtagtcc aacacggtcg gcgtctcgtc gcgcggcgga
     4741 tgggcggcat gaaacagatg ggtcggccgt tccttttcac agagggcgcg gaacgcggcg
     4801 ctgtcggtga cattcatcaa gtggctggtg gctttgacgc caagcagagt gagatccggc
     4861 gcgcgcggga cgacgtcgat ggccacgact ttgtggcctg ccgactccat cagcttggtg
     4921 cagtgggagc cgatgaagcc gttggcgccg gtgatcagta cggttgttga catgatgcct
     4981 ccttagttgc cgcgcgtgga tttctcccga tcgcagccta gtttttgcga taaagaccgt
     5041 cgatgaagcc ggattcatcg agtttgcgaa cgattctatt gtcgatgatc tcttcgactt
     5101 tggcatggct ggctttggga ttgatcgtcg acatgatccg ttgaatgttg cgcaggccgt
     5161 ccaaggcggc gtagggtttg cgctccaggc cgacgagcaa atcctggtag ccgtcttcca
     5221 aaagtgccaa gtcgttgagt ttcatatggc gcgccatgat ttgcagcacg ttgtttcggt
     5281 tcgccggcgc ggtgatgaac gcctgcgcct cgaacatcgc ttttaacacc gcttcggcgg
     5341 tttccggccg ttctctgaaa aaactaccgc ttaccgccca cgcggtgttg gtgaatggaa
     5401 tcttggcgcg ctgcaactcg atcagcaccg gcaacccttt tgatttcgtc cgccggctga
     5461 gaaacggatc gagcagcgtg gcgtcgattt gcgccgattc catcgcttga gcgagaatcg
     5521 tctggttgcc gatggcgttg atgcggattt gatcgcggtt ggcgtcgagt cccaaatgtt
     5581 cgagggcgag ataggcggcc atccacaccg tgccgccgat gctggtgacg ccgaaacgct
     5641 tgccgcgcaa gtccttggct tccttgattt ccggccggac caccagatcg taggttagcc
     5701 ggttgctcgg actg
//
LOCUS       DATIRS010000789         1720 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_746833, whole genome shotgun sequence.
ACCESSION   DATIRS010000789 DATIRS010000000
VERSION     DATIRS010000789.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_746833"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            383..>1720
                     /locus_tag="VLM90_09980"
     CDS             383..>1720
                     /locus_tag="VLM90_09980"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ13340.1"
                     /translation="MTKKKLAAAEKASSVPARGYPDLHDHLEQLEREGLLIRIDEPVD
                     KDQEMHPLVRWQFRGGIKEKDRKAFLFEQPVDASGKRYDIPVAIGILAANRRIYGIGL
                     GTDPTKVNQLWAQAKANPVPPVEIPSEAAPVHEIVIAGDELKEPGRGLDGIPVPISTP
                     GWDNAPYISAAHYITKDPDSGIHNIGTYRAMIKARDRVGCNPSLELGQGIYVHWEKYR
                     ARKEKMPAALCIGGVPAISYVAAQKLAYDVDEFAVAGGLVKAPIRVVKAKTVPLMVPA
                     DGEIIIEGFVSTEYLEPEAPFGESHGHVNPKEYNPYMEVTAITRRKNAILCSIISQVT
                     PSESSVIKKMAYEPLYLDHLKNVLGINCVTRVMLHEPLTATQKLTVIQMRQPNQAEVW
                     RALMAAVTFRPSMSKIVIAVDDDIDPENLDAVFWALGYRSQPHRDVQIIRGTDV"
BASE COUNT          395 a          506 c          501 g          318 t
ORIGIN      
        1 tcgtatccaa cttgatcggc agtcgttggc cttcaggatc catcacgtgt tttatggcat
       61 tgactataga ccaagaggcc acaggtggcg agctttggct acgccaacct ccggggtcac
      121 tgctgctcca gtaaagaatt ccttgaaacg ctctaagttg ttgacgcgca acgccgatat
      181 tcgcgctggc gcaccatgct atcgagcggc cgagcaagga aaacattggg atcaggtctc
      241 gcagtaacac atttgtcgca gtgcaaatct cgcccccctc atcgttcagt taggtgtgtc
      301 taaactcacg gtcctcgcct ttaccgaaaa aaataattga tataggctgc aaacgactga
      361 aaattcctga gagcaaggcg tcatgacgaa aaagaaatta gcagcggcgg agaaggcgtc
      421 aagcgttccg gcgcgcgggt atcccgatct gcacgatcac ttggagcaac tcgaaagaga
      481 gggcttgctg atacggatcg acgagccggt ggacaaagac caggagatgc atccgttggt
      541 gcgctggcaa tttcgcggcg gcatcaagga gaaagaccgc aaggcgttct tgttcgaaca
      601 gccggtggac gctagcggca agcgctacga tattccggtc gcgatcggga ttctggcggc
      661 gaaccggcgg atctacggca tcggtctcgg caccgatccg accaaagtca accagctctg
      721 ggcgcaagcg aaagcgaatc cggtcccgcc ggtcgagata ccttccgagg cggcgcccgt
      781 gcacgagatc gtcattgccg gcgacgagct gaaagaaccc ggccggggac tcgatggcat
      841 tccggtgccg atctccacgc cgggttggga caacgcgcct tacatcagcg cagcgcacta
      901 cattaccaaa gatcccgaca gcgggatcca caacatcggc acctatcggg cgatgatcaa
      961 agcgcgcgac cgggtcggct gcaatccttc gttggaattg ggccaaggta tctacgtgca
     1021 ttgggaaaag taccgcgcgc gcaaggaaaa gatgcccgcg gcgctgtgca tcggcggcgt
     1081 gccggcgatc tcttatgttg ccgcgcaaaa gctcgcctac gacgtcgatg agttcgcggt
     1141 cgccggcgga ctcgtgaaag cgccgatccg cgtcgtcaag gcgaagaccg tgccgctcat
     1201 ggttcccgcc gacggggaga ttatcatcga aggttttgtt tcgacggaat atctcgagcc
     1261 ggaagcgccg ttcggcgaat cccatggcca cgtcaacccg aaggaataca atccctacat
     1321 ggaagtcacc gcgatcacac ggcgcaagaa cgccattctc tgctcgatca tcagccaggt
     1381 gacgccgtcg gagtcgagcg tgatcaagaa gatggcctac gagccgctct atctcgatca
     1441 tttgaaaaac gttctcggca tcaactgcgt gacccgggtg atgctgcacg agccgctgac
     1501 ggcgacgcaa aagctcacgg taattcaaat gcgccagcca aaccaggccg aagtctggcg
     1561 cgccttgatg gcggcagtca cctttcgccc gtcgatgtcg aagatcgtca tcgccgtcga
     1621 cgacgacatc gacccggaaa atctcgacgc cgtgttctgg gcgctcggct accgctcgca
     1681 gccgcaccgc gacgtgcaaa tcatccgcgg caccgacgtc
//
LOCUS       DATIRS010000790         1572 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1925261, whole genome shotgun sequence.
ACCESSION   DATIRS010000790 DATIRS010000000
VERSION     DATIRS010000790.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1572
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1925261"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1174)
                     /locus_tag="VLM90_09985"
     CDS             complement(<1..1174)
                     /locus_tag="VLM90_09985"
                     /inference="COORDINATES: protein motif:HMM:NF014071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HSQ13341.1"
                     /translation="MSKYRVTVDTGGTFSDFVFFNEDSGEIAITKVPSTPKEPFQAVL
                     NGVKELLDRGVAAGDISFFCHGTTVGTNALLEEKGAKTGLMVTQGFRGIYEVMEQTRG
                     YGPATYDLFFEKPRLLAPPYLTEEIPERVDFKGNVLKAIDVETSRAAIRRLKKKGVQS
                     VAVCCLFSFLNPDHELKIKELFAQEFPEARLSLSYEVLPQIREFYRLSTTVINGYIQP
                     VMASYLGHLENRMREMGVTTPKLYIMQSNGGVSTFKGSAEKPVATVLSGPAGGVIASM
                     GTCERVGIDNIITFDMGGTSCDVALIHEGNPVITTQGKINLRPIALPMLDIHTVSAGG
                     GTIARIDAVGGLQVGPDSAGADPGPVCYDRGGENITVTDANMVCGVLDPDHFLGGRM"
BASE COUNT          306 a          447 c          482 g          337 t
ORIGIN      
        1 tcatgcggcc gcccaggaaa tgatcgggat ctaggacgcc gcacaccata ttggcatcgg
       61 tgaccgtgat gttttcgccg ccgcggtcgt agcacaccgg accgggatcg gcgccggcgc
      121 tgtcggggcc cacttgcaag ccgcccaccg cgtcgatgcg cgcgatggtg ccgccgccgg
      181 cgctgacggt gtggatgtcg agcatcggca gggcgatggg gcgcaggtta atttttcctt
      241 gcgtggtgat caccggattg ccttcgtgga tcagcgcgac atcgcagctg gtgccgccca
      301 tgtcgaaggt gatgatgttg tcgatgccga cccgctcgca agtgcccatg gacgcgatga
      361 cgccgccggc ggggccggag agcaccgtcg ccaccggttt ttccgccgag cctttgaagg
      421 tcgacacacc gccattggat tgcatgatgt agagcttggg cgtggtcacg cccatctcgc
      481 gcatgcggtt ctccaggtgg cccaagtagc tcgccatgac cggctggatg tagccgttga
      541 tcaccgtcgt gctcaagcgg tagaactcgc gaatctgcgg caggacttca taggacagcg
      601 atagccgcgc ttcgggaaac tcctgggcga acagctcttt gatcttgagc tcgtggtcgg
      661 gattcaaaaa cgaaaacaaa cagcacaccg ccaccgactg cacgcctttt ttcttgagcc
      721 ggcggatcgc ggcgcgcgac gtttcgacgt cgatcgcttt cagcacgttg cctttgaaat
      781 cgacgcgctc gggaatctcc tcggtcaaat agggcggcgc gagcaagcgc ggcttctcga
      841 aaaacagatc gtaggtcgcc gggccgtagc cgcgggtctg ttccataact tcgtagatgc
      901 cgcgaaagcc ctgggtgacc atcaagccgg tcttggcgcc tttttcttcg agcagcgcgt
      961 tggtgccgac ggtggtgcca tggcaaaaga atgaaatatc gccggcggcc acgccccggt
     1021 cgagcagttc tttgacgccg ttcaaaaccg cttgaaatgg ttccttcggc gtcgacggaa
     1081 ctttggtgat ggcgatctcg ccgctgtctt cgttgaagaa aacaaagtcg gaaaaagtgc
     1141 cgccggtgtc gacggtaacg cggtacttgg acatagtccg tttcgtctac catggaattt
     1201 tcgcgccttc aatcgtgcga cggaaactga acggcgttgc gacagcgcgt cgcgcgttct
     1261 ggtcggcgcc ggagattggc gcgcgcaact gcgccagctc ttgtgcttgt aacgagtctg
     1321 ttttacagat tgggtcatcg tccgggccga ggagaagtgg ccggcgccag caatcaccgg
     1381 accggcaacc aggtcagccg ctcggtgacc attgtgcttt ggctcaacta aaggaattca
     1441 ccacgaaggc acgaaggaca cagagaaaat aactgttctt aattcaatgt attgagaact
     1501 tcgtgtcctt cgtgccgtcg tggtgaacat gtttttaaac cgattgggat aattctttca
     1561 cagtctcgta cc
//
LOCUS       DATIRS010000791         2638 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_648412, whole genome shotgun sequence.
ACCESSION   DATIRS010000791 DATIRS010000000
VERSION     DATIRS010000791.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2638
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_648412"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            154..1680
                     /locus_tag="VLM90_09990"
     CDS             154..1680
                     /locus_tag="VLM90_09990"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HSQ13342.1"
                     /translation="MTLLLAIPVIGAALLVFLPRRQFAGLFSLAVLASAAAFLWSLKI
                     LARFDGTNGAMQLVERVAWMPNFGVQYILGIDGISIFLVLLTTFLMPLALLASWSVRD
                     KVKEYLIFMLLLETGMLGAFLALDLVLFYVFWEVMLVPMYFLIGVWGGTRRIYAAVKF
                     VLFTMAGSLLMLVAIIYLATRHAQISQVLTFNVLQLYDLHLPVEQQTWLFLAFALSFA
                     IKIPLFPFHTWLPDAHVEAPTAGSVILAGVLLKLGTYGFLRFAMPLFPDAAIALMPYL
                     VALSVIGIVYGAVVAMMQSDIKKLVAYSSVSHMGFVMLGLCALNMQGVQGSIYQMLSH
                     GLSTGALFLMVGMIYDRRHTRVIAEFGGLWKQMPVFSAVLLVVTFSSIGLPGLNGFVG
                     EFLILLGSFSVTPRWTAVAATGVILGAVYMLWMFRRVIFGPLNNPENQKLQDLNCREW
                     VILAPIIFLILYMGVYPQPFLSRMQPAVEVNLKRIFTMPVIPVATQSGVSAEHKTDGR
                     "
     gene            1670..>2638
                     /locus_tag="VLM90_09995"
     CDS             1670..>2638
                     /locus_tag="VLM90_09995"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HSQ13343.1"
                     /translation="MDVNLLPLLPALQVLVAALVVTVRDLFIKDGEPRGILAFYSLIG
                     LALAAAEVLLLLGGGQESAFNDSYMLDRFALFFTMIFIIAAALTILTSIHYVRQAGIR
                     EGEFYALILFATMGMIVMAAANDLMVFFLGLETMSIAVYVLTGMWRANGRSSEASMKY
                     FIMGAFATGFLLYGIALIYGATGSTNLTQISAYLLDQPTEWPVYLIGGGFLLLIGFAF
                     KVGAVPFHFWVPDVYEGAPTPVTGFMSVAVKAAAFAAWARILLYKLSPLDSDWVFPLW
                     IIAIGTMTLGNLLAITQHSVKRMLAYSSIAHAGYLLIPIVVGVEWGG"
BASE COUNT          416 a          757 c          766 g          699 t
ORIGIN      
        1 ggcggccacg gtgcgcggtt ttagtaccgt ctggcgcggt ttgcagaccg gcaacgtgca
       61 gcactacgcg gcgatgtttt tggtcggcgc cctggctcta ctcgcctact acctcggaca
      121 actgtcatga tctcagccca gggtttcgga gatttgactc tgctactcgc gatcccggtg
      181 atcggcgcgg cgttgttagt gtttttgcca cgtcgccaat ttgccgggct tttctcactc
      241 gcggtgcttg ccagtgcggc ggcgtttctc tggtcgctaa aaattctcgc ccgcttcgac
      301 ggcacgaatg gcgcgatgca actggtcgag cgggtggcgt ggatgccgaa ctttggcgtt
      361 caatatattc tcggcatcga cggcatcagc atttttctgg ttttgctcac gacttttctc
      421 atgccgctgg cgctgttggc ttcctggtcg gtgcgcgaca aggtcaaaga gtatttgatt
      481 tttatgctgc tcttggaaac cggcatgctt ggcgcgttct tagctctcga tctggtgctg
      541 ttctatgtct tctgggaagt gatgctggtg ccgatgtatt ttttgatcgg tgtgtggggc
      601 ggcacgcggc gcatctatgc ggcggtgaaa ttcgtcctgt tcaccatggc cggcagtttg
      661 ctcatgctgg tggcgattat ttatctggcc acacgccacg cccagatcag ccaagttctg
      721 accttcaatg tcttgcaact ctatgacctg catctgccgg ttgagcagca aacttggttg
      781 ttccttgctt ttgcgttgtc cttcgctatc aagataccgc tgttcccgtt tcatacctgg
      841 ctgcctgacg cccatgtgga ggcgccgact gctggatcgg tgattctcgc cggcgtgctg
      901 ttgaagctcg gcacctacgg ttttctgcgc ttcgccatgc cgctctttcc cgacgcggcg
      961 atcgcgctga tgccctacct ggtcgcccta tcggtcatcg gcattgtcta cggcgcggtg
     1021 gtggcgatga tgcagagcga cataaaaaag ctcgtcgcct attcgtcggt cagccatatg
     1081 ggcttcgtca tgctcgggct ctgcgccctc aacatgcagg gcgtgcaggg cagcatctat
     1141 caaatgctca gtcacggact gtccaccggc gcgctgtttc tcatggtcgg catgatctac
     1201 gaccgccgcc atacgcgggt gattgcggag tttggcgggc tgtggaaaca gatgccggtg
     1261 ttttcagctg tgcttctggt cgtgaccttt tcgtccatcg gactgcctgg cctcaacggt
     1321 ttcgtcggcg aatttttgat cttgctcggg tcgtttagcg tgacgccgcg ctggaccgca
     1381 gtggccgcca ccggcgtgat tcttggcgcg gtctatatgc tgtggatgtt tcgccgggtg
     1441 atcttcgggc cgctcaacaa cccggagaat caaaagctgc aggatctgaa ttgccgagaa
     1501 tgggtcattc tggcgccgat cattttcttg atcctctaca tgggtgtcta tccgcagccg
     1561 ttcttgagcc gcatgcagcc ggcggtggaa gttaatttga aacgaatctt caccatgcca
     1621 gtcataccgg tggccactca atcaggcgtc agcgcggagc acaagaccga tggacgttaa
     1681 tctcctaccc ctgctcccgg cgctgcaagt gctggtcgcc gcactggtgg tgactgtgcg
     1741 cgatctattc atcaaggacg gcgagccgcg cgggatattg gcgttctaca gcctcatcgg
     1801 tctcgctctg gccgcggctg aggtcctatt gttgctcggc ggcgggcagg aaagcgcctt
     1861 caacgacagc tacatgctcg accgcttcgc attgtttttc acgatgatct ttatcatcgc
     1921 cgcagcgctg accattctca cctcgattca ttatgtgcgc caggctggca tccgcgaggg
     1981 tgaattttac gccctgatcc tgttcgctac catgggcatg atcgtcatgg cggcggccaa
     2041 cgatttgatg gttttctttc ttggtctgga gaccatgtcg atcgcggtct acgtgctcac
     2101 cggcatgtgg cgcgccaacg gccgctccag cgaagcgtcg atgaaatatt tcatcatggg
     2161 tgcgttcgcc accggttttt tgctctatgg catcgccttg atttacggcg ccacgggttc
     2221 gactaattta acccaaatct ccgcttatct gctcgaccag cccaccgagt ggccggtcta
     2281 tctgatcggc ggcggattct tgctgctgat cggcttcgcc ttcaaagtcg gcgcggtgcc
     2341 gtttcacttc tgggtgccgg atgtctatga aggcgcgccg acgccggtga cggggttcat
     2401 gtcggtggcg gtcaaagccg ccgctttcgc cgcctgggcg cgcattctgc tctacaagct
     2461 ctcgcccttg gacagcgact gggttttccc cctctggatc atcgccatcg gcaccatgac
     2521 cctgggtaat ctgctggcga tcacccaaca tagcgttaaa cgcatgctgg cttattccag
     2581 tatcgcccat gcgggatatc tgctgattcc cattgtcgtg ggcgtcgaat ggggcggg
//
LOCUS       DATIRS010000792         1660 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1828401, whole genome shotgun sequence.
ACCESSION   DATIRS010000792 DATIRS010000000
VERSION     DATIRS010000792.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1660
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1828401"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..278
                     /locus_tag="VLM90_10000"
     CDS             <1..278
                     /locus_tag="VLM90_10000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13344.1"
                     /translation="YIKHPDTPWYVVCIQAQNPNRPRLSRYQRVTVALKSHQAVHDAH
                     RELTGSRDRWQLRELEDVQETNGAASFIFSDLNGNWWEITSAIARSV"
     gene            468..>1660
                     /locus_tag="VLM90_10005"
     CDS             468..>1660
                     /locus_tag="VLM90_10005"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ13345.1"
                     /translation="MSIAATGAQNSNPPRFFYGWYIVAVGILVNIAGTFAFSSTLSIF
                     LKPITEELGVTRGAFSLIRTFEIGVAALIVPMLGPWIDRHGGRGVLVLGVLMEGAGLL
                     LSSLVQSFWQFVLVRCSLVIAGEALLGSLVINVTIAQWFVRKRGRAMGIANLGTGIAK
                     LSIPIAAASFFVLVGWRYTWAIFGVIAPILVVAPTLIFMRRQPEDLGLRPDGDPPLAT
                     LAEPLASTTHNKRMQQSNSSDEAVWTRGQAIRLPAFWLLVVTFGIASVGIAGLNLHIF
                     SYVTDIGHSPLVAASFMSTIAITQLGSTLVWGMLADKFDIRKVSYIQFLIQGIGLVIT
                     ITSRHIHFTYIGFFLYGTGLAGSFVLREVIWANFFGRASLGTVRGLSMLFSHLFAASG
                     APFFG"
BASE COUNT          320 a          523 c          435 g          382 t
ORIGIN      
        1 gttacatcaa acatcccgac accccatggt atgtcgtctg tatccaagct cagaacccca
       61 accggccgag actgtcacgc taccagcgcg tcacggtcgc gttaaaatcc caccaagccg
      121 tccacgatgc ccatcgcgaa ctcaccggaa gccgtgaccg atggcagttg cgcgagttag
      181 aagatgttca agaaacaaat ggcgctgcat cgtttatctt ctctgacctc aacggcaact
      241 ggtgggagat tactagcgcg atagctcgat ctgtttagcc gcagagctac gcagtcgaca
      301 atgccaagct gccatttcga agctcttcaa agcgagtgat cgtcgaatcc gatttttaaa
      361 ccgtgtgcgg gacccgaact agattcctcg cttcgctcga aatgacaaaa tcatatggcc
      421 gtcatctcga acgaagagag ggatctcccc gaatcgatcc acaacccatg agcatcgcag
      481 caacaggggc acagaattcc aaccctcccc gtttcttcta cggctggtac atagttgccg
      541 tcggtatact cgtcaacatc gccggcactt tcgcgttttc cagcacgctg agcattttct
      601 tgaaaccgat caccgaagag ttgggtgtga cgcgcggcgc gttttcgttg attcgcacct
      661 tcgagatcgg cgtcgccgcg ctgatcgtgc ccatgctcgg gccatggatc gatcgacatg
      721 gcgggcgcgg cgtgctcgtt ctcggtgtgc tgatggaagg ggcgggtctg ttgctgtcga
      781 gtctggttca aagcttttgg caatttgtcc tggtgcgttg ctccttggtg atcgccggcg
      841 aagcattgct cggctcgctg gtcatcaacg tcaccatcgc ccaatggttt gtgcgcaaac
      901 ggggccgcgc catgggcatc gccaacctcg gcaccggcat cgcaaaactg agcattccca
      961 tcgccgccgc gtcctttttc gtactcgtcg gctggcgcta cacctgggcg atcttcggcg
     1021 tcatcgcacc gatcctagtc gtggcaccga cgctgatctt catgcgccgg caacccgaag
     1081 acttgggact gcgcccggat ggcgatccac cgctggccac ccttgccgag ccgctcgcgt
     1141 ccacaaccca caataaacga atgcaacaat caaacagctc tgacgaagcg gtctggaccc
     1201 gcggtcaggc gatacgactg ccggccttct ggttgctcgt cgtcactttc ggcatcgcca
     1261 gcgtcggcat cgccggcttg aatctgcata tcttttcgta cgtcaccgac atcggccatt
     1321 ctccgctcgt cgccgcctcg ttcatgagca ccatcgccat cacccaactg ggctcgacgc
     1381 tggtctgggg catgctcgcc gataagttcg acatcaggaa agtctcttac attcagttcc
     1441 tgatccaagg catcggcttg gttatcacca tcaccagccg gcacattcat ttcacctata
     1501 tcggcttttt tctctatggc acgggtttgg cgggaagctt cgtcttgcgc gaagtgatct
     1561 gggcgaactt cttcggccgg gcttcactcg gcaccgtgcg cggcctatcg atgctgttct
     1621 cgcatctctt cgccgccagc ggcgcgccgt tcttcggctt
//
LOCUS       DATIRS010000793         3429 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_57640, whole genome shotgun sequence.
ACCESSION   DATIRS010000793 DATIRS010000000
VERSION     DATIRS010000793.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3429)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3429)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3429
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57640"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..512
                     /locus_tag="VLM90_10010"
     CDS             <1..512
                     /locus_tag="VLM90_10010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13346.1"
                     /translation="FYYHHPELGPLFLKKLYGEMQITTGRDPRQMTDWLSTGKFPVSI
                     RCNAGSEVGKAVQQQLPIGYLDTDEWKEGGSASAAGGTLGIPTRAPHPNAAKIFINWL
                     LSREGQIALQKLGRPDAHNSRRIDIPKDDVDPTNRLDPGKKYFDLAKPEYQDLTPIFK
                     LVKEVLPQK"
     gene            973..2472
                     /locus_tag="VLM90_10015"
     CDS             973..2472
                     /locus_tag="VLM90_10015"
                     /inference="COORDINATES: protein motif:HMM:NF023459.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HSQ13347.1"
                     /translation="MPPYPYPQPPYYPRPPVIIPNTDRFPDKEPTSVLSAAEHPVSTF
                     SVDVDTASYAFVRRSLNGGRMPPRESVRVEEMINYFPYAYSSPENRAQPFRVTTTVMP
                     SPWAAENQLLHIGIRGYDIARSERPRANLVLLIDTSGSMQPSDRLPLLQQGFRLFVQQ
                     LRDDDRIAIVTYAGQSQTALDPTLGRDKQKILDAIDTLRASGSTAGGEGLQRAYALAE
                     RHFDKEAVNRVILGTDGDFNVGITNPKDLERFIAAKRKTGIYLSILGVGVGNLNDALM
                     QRLAQAGNGNAAYIDSLLEARKAMSEELSSTMFPIADDVKIQVEFNPMRVAEYRLIGY
                     ETRMLKREDFNDDKVDAGDIGAGHTVTAIYDVTPVGAKQRQLDPLRYQRESERTAPPA
                     NFRSDEMAFLKLRYKLPGEAASRLIGQPVRASDALAKIDTAPAEQRFAVAVAAFGQRL
                     RGENAVDSLSYGKIAELANGTRGADPEGYRAEFVRLVRMAETLGAVAQR"
     gene            2573..3106
                     /locus_tag="VLM90_10020"
     CDS             2573..3106
                     /locus_tag="VLM90_10020"
                     /inference="COORDINATES: protein motif:HMM:NF016840.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HSQ13348.1"
                     /translation="MEAAGLVLDALGRVREMVREALKDLTPEELLSPPKPHIAWLAWH
                     IARVQDANFSGLLDRPQLWIADGWNQRFNMPPDPRDYGSGHRQTREQVDAFIITDTPL
                     LLAYHEAVHAQTKDYLSTVTNADLNRVLNEPQYSPLPTLSIRLASVINCNTRHAGQIE
                     YLRGLVKFKGWFPGAER"
BASE COUNT          751 a         1017 c          989 g          672 t
ORIGIN      
        1 aattttatta ccatcacccg gagctcggcc cgctgtttct caagaaactt tatggcgaga
       61 tgcaaatcac gaccggccgc gatccgcgcc agatgaccga ctggctatcg acgggaaagt
      121 ttccggtgtc catccggtgc aacgccggca gcgaagtggg caaagccgtg cagcagcaac
      181 taccgatcgg ctatcttgat accgatgaat ggaaagaggg cgggagcgcc agcgcggcgg
      241 gcggcacact cggcatcccg acgcgcgcgc cgcatcccaa cgcggccaag atatttatca
      301 actggctgct gtcccgagaa ggacagatcg cgttgcagaa attgggccgc cccgacgcgc
      361 acaactcgcg gcgtatcgat atccccaagg acgacgtcga tccaaccaat cgcttggacc
      421 caggaaaaaa atatttcgat ctggccaaac ccgagtacca ggatctgacg ccgatcttca
      481 aactggttaa agaagtgctg ccgcagaagt agtttcactt tgctccgaat tttagggaag
      541 catcttgccg aacccttcat ttaaatctct gtgcgtcgat tcctcgtagc ttgcagcgag
      601 gcagttcatt gctgatcgcg cgatttcacc cacagcggat ccagcgtgcg ccgtggaacg
      661 aaacccgttc tctaccgtct aaagaatatc gtaagccttg tgccgatcga cctaacggag
      721 gggatttcta tgtgcaatta ttgtgttatt agaacgattc gcttgccgat tatgctggcg
      781 attctcgcct tgatcttggg cgcctgtagc ctagagaccg agatgcagcc agcagaaaag
      841 ctgcaaaacg cttcgagcgc gcaaagcaac gagtcaaagg cgccgttgcc gccccccacg
      901 ccgggcgggc caagcgcgag cggcgactcg ctacgacgca tgccagaatc cgcccgcatt
      961 ggtggcgcga tcatgcctcc atatccttac ccccagccgc cgtattaccc gcgcccgcca
     1021 gtcattattc cgaataccga tcgtttcccc gataaagaac cgacgagtgt gctcagcgcc
     1081 gccgagcatc cggtgtcgac cttcagcgtc gatgttgaca cggcgtccta cgctttcgtt
     1141 cgccgcagtc tcaacggcgg gcgtatgccg ccgcgagaat ctgttcgcgt cgaggagatg
     1201 atcaactatt ttccgtatgc gtattcctca cccgagaatc gcgcccagcc gtttcgcgtg
     1261 accacgaccg taatgccgag tccctgggca gcggagaatc agctgctcca cattggtatt
     1321 cgcggctacg atatcgcgcg cagtgaaagg ccgcgcgcca acctcgtgct cttgatcgac
     1381 acctcgggtt cgatgcagcc gagcgatcgt ctgccgttgt tgcagcaggg ctttcgcctg
     1441 tttgtccagc aattgcgcga cgatgaccgg attgccatcg tcacctatgc gggccagtcg
     1501 caaactgccc tcgatccgac cctagggcgg gataagcaaa agattctcga cgccatcgac
     1561 acccttcgag cttccggatc gactgcgggc ggcgagggct tgcagcgcgc ttacgctctc
     1621 gccgagcgcc acttcgataa agaggcggtg aatcgcgtga tcctcgggac cgacggtgat
     1681 ttcaatgttg gcatcaccaa tccaaaagat ctcgaacgct tcatcgccgc caagcgcaag
     1741 accgggatct atttatcgat cctcggtgtc ggcgttggca atctcaacga cgcgctcatg
     1801 cagcggctgg cgcaggccgg caacggcaac gcggcctata tcgattcctt gctcgaagca
     1861 cgcaaggcga tgagtgaaga attgtcgtcg accatgtttc cgatcgccga tgatgtgaag
     1921 atccaagtag agtttaaccc aatgcgcgta gccgagtacc ggttgatcgg ttacgagacg
     1981 cgcatgctga agcgcgagga tttcaacgat gacaaggtcg acgccggcga catcggtgcc
     2041 ggccacacgg tgacggcgat atacgatgtc accccggtgg gcgcgaaaca gcgccaactc
     2101 gatccgctgc gttatcagcg ggagagcgaa cgcacagcgc cgcccgccaa ctttcgctcg
     2161 gatgaaatgg cattcctgaa gctgcgctac aaacttcccg gcgaagctgc cagtcgactc
     2221 atcgggcagc cggtgcgcgc gtccgacgcg ctggcgaaga tcgacaccgc gcccgcggag
     2281 cagcgctttg ccgtcgcggt tgccgccttc ggtcaacgcc tgcgcggtga gaatgcggtg
     2341 gacagcttga gttacgggaa aatcgcggag ctggctaacg gcacccgcgg cgccgacccg
     2401 gaaggctatc gcgccgagtt cgtccggctg gtgcgcatgg cggaaactct gggtgcggtg
     2461 gcacaacgct gaaggatgag gttcgattca agtttacgcg attgagtctt gcgtcgatga
     2521 tcacgcggca ctaaagtcgc ccgcgacgac gaagtcatgt cgaggaggat ttatggaagc
     2581 cgccggactg gttttggacg cgttaggccg cgtgcgcgaa atggtgcgcg aggcgctgaa
     2641 ggatctcacg ccggaagaat tattatcgcc gcccaagccg cacattgcct ggctggcctg
     2701 gcatatcgca cgggtgcagg atgctaactt ttccggccta ctcgaccgac cgcagctctg
     2761 gatcgccgac ggttggaacc agcgcttcaa tatgccgccc gatccaagag actacggctc
     2821 cggccatcgc cagacccgtg aacaagtgga tgccttcatc atcaccgaca cgccactgct
     2881 gctcgcttac cacgaagctg tgcatgcgca aaccaaagat tatctgtcga cggtgaccaa
     2941 tgccgacttg aaccgcgtcc tcaacgaacc gcaatactcg ccgctgccga cgctgagtat
     3001 ccggctcgcc agcgtgatca actgcaacac gcgccacgcc ggccagatcg agtatctgcg
     3061 tgggctggtg aaattcaaag gctggtttcc cggggcggag aggtgatgca gcgtcgagac
     3121 agctgaaatc cctgtaaatc acggcgggtt gtgataaatt aaagcatgat cgaaaaggta
     3181 gtaacgaaag tcggtttgcg agactcaggt agcagtcaga cggacttggc ctattggctt
     3241 aagaagacac ccgaggagcg agtcgccgcg gtcgattatt tgcgccgtca agcccatgga
     3301 actacagcaa gacttcagag agttgctcgc gttattcaac taccatcacg ttaactacgt
     3361 gatcgctgta ggtcgggcca aagatctcgc tgacttggaa gctctcgggc aaaagtaggc
     3421 tggagtctg
//
LOCUS       DATIRS010000794         1665 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_452166, whole genome shotgun sequence.
ACCESSION   DATIRS010000794 DATIRS010000000
VERSION     DATIRS010000794.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1665
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_452166"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1415)
                     /locus_tag="VLM90_10025"
     CDS             complement(<1..1415)
                     /locus_tag="VLM90_10025"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HSQ13349.1"
                     /translation="MRSRRKSKGSNKRAAKKPAFRVEEATITAVHRAFRAKQLTAAEL
                     VSRYFERIRAHNGVCVGGDVDAATGLQLGDITPIPNAGQLNAFITLNLKEDKRIKLGF
                     PEKLKRTHTGRDDAKYPDALDRARELDRYFARTGKFAGPLHGIPIAIKDNYDTFDMRT
                     TAAAAAQYADDRPPDDATMVAKLRAAGAILIGKTNMDEYAPAGIARSAFGGQTCNPYD
                     TTRIPGGSSGGSAAAVAANLAMCALGTDTSGSVRFPSSCCSLVGLVATQGLVSRDGIV
                     PLSFTRDRGGPICRTVQDTAILLEVLAGYDPKDPVTAACAAQPRLSYARFAGGKSLRG
                     KRLGVLRDLMIEASVADRDPIRVANEAIADMKKAGATIVDPVNVDKAIADLVPYLEPG
                     WLARNFPAAFPESAKPIDRIVSMAFDHALIPAGARGVNLRMLAAQSRGHEARYAINRY
                     LRERGDAKFKNLQDMLAMPMFS"
BASE COUNT          301 a          511 c          530 g          323 t
ORIGIN      
        1 gaaaacatcg gcatggcgag catgtcttga agattcttga acttggcatc gccgcgctcg
       61 cgcaagtagc ggttgatcgc gtagcgcgct tcgtggccgc gcgactgcgc ggcgagcatg
      121 cgcaggttca cgccgcgggc gccggcggga atcagggcgt gatcgaacgc catcgacacg
      181 atccggtcga tgggcttggc ggactcggga aacgccgcgg gaaaatttct cgccagccag
      241 ccgggctcga gatagggaac cagatcggcg attgccttgt cgacgttcac cggatcgaca
      301 atcgtcgcgc cggccttttt catatccgcg atcgcctcgt tggcgacgcg aatcgggtcg
      361 cgatcggcga cgctcgcttc gatcatcaga tcacgcagca cccccagcct ttttccgcgc
      421 aaggattttc caccggcaaa ccgcgcatag gaaagcctgg gctgcgcggc gcaagccgcc
      481 gtcaccggat ctttgggatc gtagccggcg agaacttcca gaagaatcgc cgtgtcttgc
      541 acggtgcggc agatcggccc gccgcggtcc ctggtaaatg acagcggcac gatgccgtcg
      601 cggctgacca gcccttgggt cgcgaccagg ccgaccaggc tgcagcacga tgacggaaag
      661 cgcaccgagc cggatgtgtc cgtgcccagg gcgcacatgg cgaggttggc cgccaccgcc
      721 gcggccgagc cgccgctcga tcccccgggt atcctcgtcg tatcgtaagg attgcaggtc
      781 tgaccgccga aggcgctgcg ggcaattccc gcgggagcgt actcgtccat gttggtcttg
      841 ccgataagga tcgcgccggc cgcgcgcagt ttcgcgacca tggtggcgtc atcgggcggg
      901 cgatcgtcgg cgtactgcgc cgccgctgcc gccgtcgtgc gcatgtcgaa agtatcgtag
      961 ttgtccttga tcgcgatcgg gatgccgtgg agcgggccgg caaatttgcc ggtgcgggcg
     1021 aaataacggt cgagctcgcg cgcccgatcc agcgcgtcgg gatattttgc gtcatcgcgc
     1081 ccggtgtgag ttcgtttcag tttctcggga aaaccgagct tgatgcgctt gtcttctttc
     1141 agattcagag tgatgaaggc attgagctgc ccggcgttcg ggatcggcgt aatgtctccc
     1201 agttgcagtc cggtggcggc atcgacatcg ccgccgacgc agacgccgtt atgggcccgg
     1261 atgcgctcga aatagcgact gacgagctcc gctgctgtca gctgcttggc gcgaaacgcc
     1321 cgatgcactg cggtaatcgt cgcctcttcc acgcggaagg caggtttctt tgccgccctt
     1381 ttatttgaac cttttgactt tcgccgcgag cgcatgattc acccctctcc ggaagaaccg
     1441 agcgtcaacc taacaaaccg gcgccgtcgg gtgcaatcgc ttatttgaaa agctgcgcag
     1501 ggcatcgtag cgcgcagcta atttcctgcc atggcttacc gcgccaccgc ggcacaggcc
     1561 aggaaaaaaa gcttgcccgg cgggtacgaa ggattgtggc gactttatta aagggcaaaa
     1621 agcggacctg acccgtttcg cttgggtcaa tcacatgcat caaat
//
LOCUS       DATIRS010000795         1710 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_254890, whole genome shotgun sequence.
ACCESSION   DATIRS010000795 DATIRS010000000
VERSION     DATIRS010000795.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1710
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_254890"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(261..1394)
                     /locus_tag="VLM90_10030"
     CDS             complement(261..1394)
                     /locus_tag="VLM90_10030"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13350.1"
                     /translation="MINGYRIFDADAHVMMSSKMWEDLPREFAPRRPRPLEIADAAGA
                     GIRRTGWLIEGRMEPHAYGPGAQGANTPTTVMPEFGAAPATLGSLDLSQPDKRLRDLD
                     ALGIDAQLLFPSSLYACMGSDPFFEAAMFRAYNRYAGRQCKADSKRLKWAGLLPLRDT
                     HEAIVALGEMQELGASVAVVFGTVGERLLSHKSFTPIWDEFARAGLPLCVHMGRSYPP
                     FDQLVESRLEAHVIAMGMPAQLGFVAVVAQGMLDRYPNLKVAFLEFGAEWLFYVVGRL
                     AHYLPSYRGDPTVQAMGRLPEKAIEEYLKSGRFFIAPEADDPLLLQEISLVGAEHILF
                     SSDYPHGEGRDNAASEILERRDLTDAQKRNILYDNTVRFCGEP"
     gene            complement(1485..>1710)
                     /locus_tag="VLM90_10035"
     CDS             complement(1485..>1710)
                     /locus_tag="VLM90_10035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13351.1"
                     /translation="CDPKTAISIIDGCWSTPLDPAMHPDQRDAGTVVNSRAVINACRP
                     YAWRDRFPPVNALSPELKQKITDKWKKELA"
BASE COUNT          342 a          489 c          539 g          340 t
ORIGIN      
        1 tattgtgcag ttcgcattgc tagctggtgt tagatctctg cgttggaagt tcattggcac
       61 aggagaagag aagcgtcccc atcgtcttta tcagtttggc gtaaaatagc gagatcccgc
      121 acgtccgtat tcgcaagatc gctaagcagg aactgggcgc cgaagtgcgg ttgaagtgag
      181 cgtgaatgct attccggcag tcgtcgtatt accgcaagtg gaaccaacca ctggcaatta
      241 gcttctagaa gctaggaaga ctacggttcg ccgcaaaacc gtacggtgtt gtcgtacaaa
      301 atattacgct tctgagcgtc agtcagatcg cggcgttcca agatctcgct ggcggcgtta
      361 tcgcgccctt cgccatgcgg atagtccgag gagaacaaga tatgctcggc gccgaccagg
      421 gagatttctt gcagcagcaa tggatcgtcg gcttcggggg cgatgaagaa gcgcccggac
      481 ttgagatact cttcgatcgc cttttctggc agccggccca tggcctgcac ggtcgggtcc
      541 ccgcggtagc tcggcagata gtgagctaac cggccgacca cgtagaacaa ccactcggcg
      601 ccaaactcca agaacgcaac tttcaggttc ggatagcggt cgagcatgcc ctgggcgacc
      661 acggcgacaa agcccaattg cgccggcatg cccatggcga tgacatgggc ttctagtctg
      721 ctttccacca gttgatcgaa aggcggataa ctgcggccca tgtgcacgca tagcggcagc
      781 cccgcgcggg cgaattcatc ccagatcggc gtgaaacttt tgtgcgacag cagccgctcg
      841 ccgacggtgc cgaagaccac cgctacgctg gcgcccagct cctgcatttc gccgagcgcc
      901 acgatggctt catgagtatc gcgcaggggc aacaagccgg cccacttcag gcgtttcgag
      961 tcggccttgc attggcggcc ggcatagcgg ttgtaagcgc ggaacatcgc cgcttcgaaa
     1021 aacggatcac tgcccatgca ggcataaagg ctcgaaggaa acagcagctg ggcgtcgatg
     1081 ccgagcgcat cgagatcgcg cagtcgcttg tcgggttgag acaaatcgag ggagccgagt
     1141 gtcgctggcg cggcgccgaa ctcaggcatg accgtggtcg gtgtatttgc tccctgggcg
     1201 ccgggaccat aggcatgggg ctccatccgg ccttcgatga gccagccggt gcggcgtatt
     1261 ccggcgccgg cggcatcggc gatttctaac ggccgcggcc ggcgcggggc aaattccctg
     1321 ggcagatcct cccacatctt tgagctcatc atgacatgag cgtcggcgtc gaagattctg
     1381 tatccgttga tcatggcggg ttctccgcga tcagcctagc gcagcgttcg acacaggcaa
     1441 ttagcgagac aaccgcggca ggcgttaagc agccagagga ttccttacgc cagctctttc
     1501 ttccacttgt cggtaatctt ttgcttgagt tcggggctga gggcattgac cggcggaaaa
     1561 cggtcgcgcc acgcgtacgg gcggcaagcg ttgatgaccg cacggctgtt gacgacggtg
     1621 cccgcgtcac gctggtcggg gtgcatggcc gggtcgaggg gcgtgctcca gcagccgtcg
     1681 atgatgctga tggcggtctt gggatcgcag
//
LOCUS       DATIRS010000796         1652 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_254974, whole genome shotgun sequence.
ACCESSION   DATIRS010000796 DATIRS010000000
VERSION     DATIRS010000796.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1652
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_254974"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1652)
                     /locus_tag="VLM90_10040"
     CDS             complement(<1..>1652)
                     /locus_tag="VLM90_10040"
                     /inference="COORDINATES: protein motif:HMM:NF015655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13352.1"
                     /translation="RIENELLTCDDKARNLKLGYGGIRDIEFFTQALQLVNGGYEPKL
                     RGPSTLPALAELAKRKFISKEERDKLTEAYRFLRQAEHKVQIVQEGHAHSITEGKDEE
                     QAYARRLGYTRKGKLGERERFWRDHHRYTNTVRNIFDRLFYSAPKEIESKAASAEGAI
                     WNDLDSETLITKQLAKVGFAEPEKAYENLLGVRDGEIYSPPSPKRLKVMRTLGPALIA
                     EIAKSGATDRALFNLASFSHRIGGRTGFLTLLAEKPETMRLLITLFADSQFLTDLFLK
                     RPELIDTLIRADLTRIDKSKNDMLAELRHNLAEVEDIEGKLNVLRRYKNEEFIRIGLH
                     DLGGSIEFLTVLRQLSDLAEACLQAALDLALADLSAKFGAVAGGRFAVVGGGKIGARE
                     IDYNSDLDLVFIYEAGEDAQSRGGSQGRLPAHEFYVRVGQRLPTYLSAPTEEGVAYKI
                     DMQLRPSGKAGPIVCALDAYREYHQSTSQLWERQALIKTRFIAGDPSLGRAVESVVEQ
                     CAYGTGLTQEGVGEIHHLRMRMERELAGEGESRFNLKKGRGGL"
BASE COUNT          306 a          482 c          491 g          373 t
ORIGIN      
        1 aggccgccgc ggcccttctt caaattgaat cttgattcgc cttcgccggc gagttcccgc
       61 tccatgcgca tgcgcaggtg atgaatctcg ccgacgcctt cctgggtgag cccggtgccg
      121 taggcgcact gttcgacgac gctctcgact gctctgccga gcgatgggtc gccagcgatg
      181 aagcgggtct tgatcaaggc ctggcgctcc cagagttgcg aggtgctttg gtgatattcg
      241 cgataggcgt cgagcgcgca aacgatcggt cccgccttcc ccgacggccg caactgcata
      301 tcgatcttgt aggcgacgcc ttcttcggtc ggcgcagata aataggtcgg caggcgctgg
      361 ccgacccgca cgtaaaattc atgggcgggt aatcggcctt gggagccgcc gcggctctgc
      421 gcgtcctctc ccgcttcata gataaaaacc aaatctagat cggagttgta atcgatctcc
      481 cgagcgccga tcttgccgcc gccgacgacc gcgaaccgcc cgccggcaac cgcgccgaat
      541 ttagcgctta aatcggccaa tgcgaggtcg agggcggcct gcaaacaggc ctcggcgaga
      601 tcggacagtt ggcgcagcac agtgagaaat tcgattgatc cgccgagatc gtgcaggccg
      661 atgcggataa actcttcatt cttataacgg cgcagtacgt tgagcttgcc ctcgatgtcc
      721 tcaacttcag cgaggttatg gcgcagctcg gcgagcatat cgtttttcga tttgtcgatg
      781 cgtgtcagat ccgcacgaat caaggtgtcg atgagttctg gacgtttgag gaacagatcg
      841 gtgagaaact ggctatcggc gaacagcgtg attaacaacc gcatggtctc gggcttctcg
      901 gctaacagtg tcagaaagcc ggtgcgcccg ccgatgcggt ggctgaaact ggcgaggttg
      961 aacagcgccc gatccgtcgc gcccgacttg gcgatctcgg cgatcaaagc cgggccaagg
     1021 gtgcgcatga ctttcaatcg ttttggactc ggcggcgaat agatttcgcc gtcgcgcacg
     1081 ccgagcagat tctcgtaggc tttttccggc tcggcaaagc cgaccttggc caattgcttg
     1141 gtgatcaaag tttcgctgtc gaggtcgttc caaatcgcgc cctcggcact ggcggctttg
     1201 ctctcgatct ctttcggcgc gctataaaaa agccgatcga agatgttgcg cacggtattg
     1261 gtatagcggt ggtgatcgcg ccagaagcgc tcccgctcgc ccagcttccc tttgcgcgtg
     1321 taacccaaac gccgcgcgta ggcttgttct tcgtccttgc cctcggtgat cgaatgggca
     1381 tgtccttctt ggactatttg caccttatgt tcggcttggc gcagaaagcg gtaggcttca
     1441 gtcaacttgt cgcgctcttc tttggaaata aatttgcgct ttgccagttc cgccagcgcc
     1501 ggcagggtgc tcggaccgcg caacttcggc tcgtagccgc cgttgaccag ttgcagcgct
     1561 tgggtgaaaa actcgatatc gcgaatgccg ccgtagccaa gtttcaaatt gcgcgccttg
     1621 tcgtcgcagg tgagcagttc gttctcgatg cg
//
LOCUS       DATIRS010000797         1727 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1239051, whole genome shotgun sequence.
ACCESSION   DATIRS010000797 DATIRS010000000
VERSION     DATIRS010000797.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1727
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1239051"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(275..1018)
                     /locus_tag="VLM90_10045"
     CDS             complement(275..1018)
                     /locus_tag="VLM90_10045"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSQ13353.1"
                     /translation="MKANTLRLLSLITLGAAWEIAGRTGNARLLPPISKVLSTWFDLL
                     VSGQLFQALAVSLQALTIGFALSVLFGVPLGLLMGRYRRLEAFLDIYMTALLTVPMIS
                     FIPFLVIAFGLGLHSRVWIVFLFAFVIIAINTTAGVRNVDPTLTEMAKSFGAKESELF
                     LKIILPAALPMIMAGIRLGMGRAVLGMVTSEMILAVVGFGAMLMTFSASFNSAALFAT
                     ILTIVLLAVALLALIQNLDRRLTPWRAAA"
     gene            complement(1099..>1727)
                     /locus_tag="VLM90_10050"
     CDS             complement(1099..>1727)
                     /locus_tag="VLM90_10050"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13354.1"
                     /translation="KDPKQLDGKRVGYHAPITVTEALVKWMAQHFKIAPNWLIIPGSD
                     VRAEAIMRGQLDATPAEIVDVLNILNAKPGQFHVLISYAKIFPQLIGSMYFARADYLQ
                     KESAAVDRVMEALLRAHRNAEERPASVRENALRLLPETKPELIDAIAANYKELRIWDI
                     NGGAGKERGDASIKFFEDAGLLKKGAVSFAQSFDTGPLDRVLKKIGRK"
BASE COUNT          365 a          470 c          553 g          339 t
ORIGIN      
        1 ttggcaaaca gacccagatc cttggcggtc cagatggttg cctgggtcgg cgcgatcacc
       61 gtgtaagcga cgcgcagttt ttccattggc gtttgcgccc cggcatgaga atgcgccagc
      121 gaaattgcca tgactgcgca aaggagcgag agtggtctat tcaagatgca atttttcatc
      181 acgatataat ctccagggat gggctgattc accgataaac gccggcccgt agcctcggtg
      241 catctgtaac ccaagtcggc ggatttaaaa agcctcaggc ggccgcacgc cagggggtca
      301 accggcggtc gaggttttga atcaatgcca acaatgccac ggcgagcagg acgatggtca
      361 agatagtggc gaacagcgcg gccgaattga acgacgcgct aaaagtcatc agcatggcgc
      421 caaagccgac cacggcgaga atcatttcgc tggtgaccat gcccaacacc gcgcgtccca
      481 tgccgagacg gattccggcc atgatcatcg gcagagcggc cggcaggatg attttcaaaa
      541 acagctcgct ctctttggcg ccgaaggact tggccatttc ggtcagcgtc ggatcgacgt
      601 tgcgcacgcc agcggtggtg ttgatggcga tgatgacgaa ggcgaacaga aaaacgatcc
      661 agactcgcga gtggaggccg aggccgaagg cgatgactaa aaatggaatg aacgaaatca
      721 tcggcaccgt gagcagggcg gtcatgtaaa tatcgagaaa agcttcgagc cggcggtagc
      781 ggcccatgag caaccccagc gggacaccga acagtaccga gagagcgaaa ccgatggtga
      841 gagcctgcaa gctcacggcg agagcttgga agagttggcc ggagaccagc aggtcgaacc
      901 atgtgctcag gactttcgag atcggcggca gcaagcgggc gttgccggtg cggccggcga
      961 tctcccaggc cgcgccgagg gtaatgagag agagtagtct gagcgtgttg gctttcatat
     1021 cgccttcgcg cgtgcagggg cggttttcaa acctgcccct gcgactgcgt cctatgcgtc
     1081 gtgatttgat gcaagggttt attttcggcc gatcttcttg agcacgcggt cgagggggcc
     1141 ggtgtcgaag gattgcgcga agctcaccgc gccttttttc agcagtccgg catcctcgaa
     1201 aaacttgatg ctggcatcgc cgcgctcttt accggcgccg ccgttgatat cccagatgcg
     1261 cagctctttg taattcgccg cgatggcgtc gatcagttca ggtttggtct cgggcagcag
     1321 ccggagggcg ttttcgcgca ccgacgcggg ccgttcctcg gcgttgcggt gggcgcgcag
     1381 gagcgcttcc atcactctat cgacggcggc gctttctttt tgcaagtaat cggcgcgggc
     1441 aaagtacatg gagccgatca gttgcgggaa gatcttggca taggagatca agacatgaaa
     1501 ctggccgggc ttggcgttca aaatattcag cacgtcgacg atctccgccg gggtggcgtc
     1561 gagctggccg cgcatgatcg cttcggcgcg cacatccgag ccgggaataa tcagccagtt
     1621 gggcgcgatc ttgaagtgct gcgccatcca tttgaccagc gcctcggtga cggtgatcgg
     1681 cgcatggtag ccgacccgct tgccgtcgag ctgcttgggg tctttga
//
LOCUS       DATIRS010000798         1867 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1925905, whole genome shotgun sequence.
ACCESSION   DATIRS010000798 DATIRS010000000
VERSION     DATIRS010000798.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1867)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1867)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1867
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1925905"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..311
                     /locus_tag="VLM90_10055"
     CDS             <1..311
                     /locus_tag="VLM90_10055"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HSQ13355.1"
                     /translation="AVMQLLKTGALKNCVQMGKYFVKGLEALKKRFSFIRDIRGKGLL
                     IGVELEIEGSKIAEACMLEGLLMNCTAAKVLRFVPPLTIKKKEIDRGLAILEKVLARQ
                     "
     gene            329..1345
                     /gene="argF"
                     /locus_tag="VLM90_10060"
     CDS             329..1345
                     /gene="argF"
                     /locus_tag="VLM90_10060"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: protein motif:HMM:NF001986.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HSQ13356.1"
                     /translation="MKKRDLLNFDGMSRRDFDGLLQLAGELKRKQKRGIPHRLLDGKG
                     MALVFEKPSLRTRSTFAVGITQLGGSAVYLGPSEVGLGTRETPADCARNLDRWFDLVT
                     VRTFAHKIIEEMAEYSSAPVINALTDSYHPCQVLADCQTLIEHKGGLDGLKIVFVGDG
                     NNMVHSWLEAAAIVPFSFALACPKGYEPDAAILQKARGQGAKIDITHAVDEAVAGADA
                     IYTDVWTSMGQEKEAQDRLNAFRAYQVNSQVVALAKKDAVVMHCLPAHRGEEITHEVL
                     ESPQCVAFDQAENRLHAQKAVMVWLLKGFKGSLRQAQGLSLSKAKVQGSRKTKGSRGS
                     KKST"
     gene            1342..>1867
                     /locus_tag="VLM90_10065"
     CDS             1342..>1867
                     /locus_tag="VLM90_10065"
                     /inference="COORDINATES: protein motif:HMM:NF012966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase domain-containing
                     protein"
                     /protein_id="HSQ13357.1"
                     /translation="MNVKKVVLAYSGGLDTSVILRWLKEEYGCEVIAFCADLGQGEDL
                     QAVRKKALQTGASKVVIGDLREEFVKHYVFPMLRANAVYEGSYLLGTSIARPLIAKGQ
                     IDVAVREKADAVSHGATDKGNDQVRFELTYYALKPGIKVIAPWREWNLNARSTLIDYA
                     RKHGIPVPVTKAKPY"
BASE COUNT          422 a          515 c          570 g          360 t
ORIGIN      
        1 tggcggtgat gcagctgctc aaaaccggcg ccctcaaaaa ttgcgtgcag atgggcaaat
       61 acttcgtcaa agggctcgag gctttgaaaa aacggttttc gtttattcgc gatattcgcg
      121 gcaagggact gctcatcggc gtcgagcttg agatcgaagg cagcaagatc gccgaagcgt
      181 gcatgctcga gggcttgctg atgaattgca cggcggccaa agtgctgcgc ttcgtgccgc
      241 cgctgaccat caagaaaaaa gaaattgacc gcggcttagc gatcttggaa aaagtgctgg
      301 ctcgccaata atccaattta ccggttcgat gaaaaagcgt gatttactta atttcgacgg
      361 catgagccgg cgagacttcg acggcctttt gcagctcgcc ggcgaactca agcgcaaaca
      421 gaagcgcggc atcccgcatc gactgctgga cggcaagggc atggcgttgg tgttcgagaa
      481 accaagcctg cgcacgcgct cgaccttcgc cgtcggcatc actcagctcg gcggcagcgc
      541 ggtctacctg ggaccgtcgg aagtcggctt gggcacccgg gaaacgccgg cggactgcgc
      601 gcgcaatctc gaccgctggt tcgatctcgt caccgtgcgc accttcgccc ataaaatcat
      661 cgaagaaatg gcggagtatt catcggcgcc ggtgatcaat gcgctcaccg atagctatca
      721 cccgtgccag gtgttggccg actgccaaac cttgatcgaa cataaaggcg ggctcgacgg
      781 tttgaagatc gtcttcgtcg gcgacggcaa taacatggtc cattcctggt tggaagccgc
      841 cgccatcgtg ccgttctcgt tcgcgttggc ctgtcccaag gggtacgagc ccgacgcggc
      901 gatcttgcaa aaggcgcgcg gccaaggggc gaagatcgac atcactcatg ccgttgacga
      961 agcggtggcc ggcgccgatg cgatttacac cgatgtctgg accagcatgg gccaggagaa
     1021 agaagcgcaa gaccgtttga atgcgtttcg cgcctatcag gtcaacagcc aggtcgttgc
     1081 gctggccaag aaggatgcgg tggtgatgca ctgcctgccg gcgcaccgcg gcgaggagat
     1141 cactcacgaa gtgttggaaa gcccgcagtg cgtcgccttc gatcaagcgg agaatcgcct
     1201 ccatgcgcag aaggcggtga tggtttggct gttaaaaggg ttcaagggtt cccttcggca
     1261 ggctcagggc ctgagtttat cgaaggcaaa agttcaaggt tcaaggaaga cgaagggaag
     1321 cagaggctcg aagaaatcca catgaacgtc aaaaaagtag tattggctta ctccggcggt
     1381 ttggatacgt cggtcatttt acgctggctc aaagaagaat acggctgcga agtcatcgcc
     1441 ttctgcgccg acttgggcca gggcgaagat ctccaggcgg tgcgcaagaa agcgctgcag
     1501 accggcgcga gcaaagtcgt gatcggcgac ctgcgagaag agttcgttaa acattacgtt
     1561 ttcccgatgc tgcgcgccaa tgccgtgtac gaaggctcct atttattggg gacctcgatt
     1621 gcccggccgc tgatcgccaa aggccagatc gatgtcgccg tgcgggaaaa agccgacgcg
     1681 gtctcccatg gcgccaccga caagggcaac gatcaggtgc gcttcgagct cacctactat
     1741 gcgctcaagc cgggcatcaa ggtcatcgcc ccctggcgcg agtggaattt gaatgcgcgc
     1801 tcgactttga tcgattacgc gcgcaagcat ggcatcccgg tgccggtgac caaggctaaa
     1861 ccctaca
//
LOCUS       DATIRS010000799         4534 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1731172, whole genome shotgun sequence.
ACCESSION   DATIRS010000799 DATIRS010000000
VERSION     DATIRS010000799.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4534
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1731172"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..260)
                     /locus_tag="VLM90_10070"
     CDS             complement(<1..260)
                     /locus_tag="VLM90_10070"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSQ13358.1"
                     /translation="MKSEPFSLYIHIPYCLSKCPYCDFNSHVVTQIPETGYTNALLRE
                     LELYGEESGWRGRTSQSIFFGGGTPSTFKPTSIGKLLAWVAAT"
     gene            446..3100
                     /locus_tag="VLM90_10075"
     CDS             446..3100
                     /locus_tag="VLM90_10075"
                     /inference="COORDINATES: protein motif:HMM:NF013132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HSQ13359.1"
                     /translation="MADLADTIRNIPLFSGLSREDIAKIMGYLVEVECAAGHKIFSQG
                     DQGDALYLIQSGAVDVQVDSGGGRSETIAVLGPQEYFGEMALLSSAPRSATMIAVKDC
                     LVWKLSRESWDDLIAKHATWLLHFCAVLSQRLSEMDRQYSQGRNAFDSLADEFYRKQP
                     PAVQQFYRHAALLTTLDPRAVGALLQTDAAGSYLAALEASRLPLIRRVNHDDYELHGF
                     FREFLSEKLLETEGAESKVGLHVAFAARYEALGDWPSAVEQSLAAKDWANAGRTLIAH
                     KDEVSESRLRVVKDCLGRLPADVFYSDVGLVHLQVDTLCRLGDSAGGLRCLKEALARR
                     EAVLGAATVARYHHAADRMFARTDHAQALTYLRNALNLAAQQESVRSGHSESEVERAH
                     GPLTVAARDKSSLPGQSWFARFAGAREKLAIGSWLGGVLGVGLWGYLWFFTPDIGLSP
                     SATKQLAILLFTLVFWVFRVLPDYGVALIFALGFILTGLAKPEVVLGGFASTTWFMTL
                     GVLGLGAAITSTGLFYRFSLQLVRYFPLKYNWQIFALGIMGIVVMALIPQQSARTAII
                     SQMLLNLSESLGYKNPSRASTGLFVASFLGLGQLGFLFLTGSTTSLIAWGLLAPEVRG
                     QFTWGYWFLAALPPTLIVSVIIVGATMLLYQPESQSQISYKMVQTQLEILGPLSKYEW
                     ITLAVLCATVTGWLTGSTHQIDGAWVALLALCLLINTGVLGWGMLKKSIDWEMLIYMG
                     VTLSIPTLLTAAKIDQWLVGLLAPLVVPFSETPALAMIVIALITYAVKLVFTSFLTVV
                     TLVIALLPLAGELQINPWIMIMIVLVASEVWFFPFQVDWHTLAYATTDGKGFSYRDMK
                     RIRLFYAAAYLIALVAAIPYWRYLGLMR"
     gene            3196..4173
                     /locus_tag="VLM90_10080"
     CDS             3196..4173
                     /locus_tag="VLM90_10080"
                     /inference="COORDINATES: protein motif:HMM:NF017770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjgN family protein"
                     /protein_id="HSQ13360.1"
                     /translation="MDTPTQTLDTAVHSTYPIHFHGRGGSLFGIQIVNLFLSLITLGI
                     YSFWGRVKVRRYLASQSEFAGDRFAYHGTGQELMIGWTKAMVLFGIPLFVLAVLQVIV
                     GMESDLFDVLQILIYIVVGIFIPVAMVNARRYRLSRLSWRGVRFSFRGGVRDFIAIYI
                     KGWLLTVVSLGFYYPFWQNRRQTFMVGNSFFGNQKFAFDGRGSDLFLTFVLHMILTLP
                     TFFLCWLWYWARVQRYYADHTSFQAARLRSTVTGGGVFGLWFGNAILFILTLGLGWSW
                     ITVRNMRYYAIHLTMVGALDVAGVMQEVQTATATGEGLSGFLDLDFDLG"
     gene            4195..>4534
                     /locus_tag="VLM90_10085"
     CDS             4195..>4534
                     /locus_tag="VLM90_10085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13361.1"
                     /translation="MQLQWFGYYFDGQSANRRTARIYLEPGNLRVDLDDGAMLSWPYA
                     EIRQTQGAYAGDQVRLEHGGEPAEVLLIDDDSFLTSLHQLLPSRAGGFHNPAKRTQRF
                     QLTIVAACASV"
BASE COUNT          799 a         1259 c         1369 g         1107 t
ORIGIN      
        1 gtcgcggcga cccaggccag aagtttgccg atgctggtcg gtttgaatgt cgacggcgtg
       61 ccgccgccga agaagatgct ctgtgacgtt cggccgcgcc agccgctttc ctcgccataa
      121 agttccagtt cccgtagcag cgcgttggta taaccggtct ccgggatctg cgtgacgacg
      181 tgggaattga agtcgcagta cggacacttg ctgaggcagt acggtatatg aatgtagaga
      241 gaaaacggct cactcttcat gtcaacccta tcctagaggt ccgcacgaat gagttcaatc
      301 cggcgattgc cacgctggat tggaagtcgc cacgcctgtg agagagccgg ttgcgcgttt
      361 ctgtgggaaa gtttatgaat cggactgcct ttgcgagcgc tagagcaaca acttctgaca
      421 gggggattcc accagcaaac ttgcgatggc cgatttagcc gataccatta gaaacatccc
      481 gctgttctcc gggctgtcgc gtgaagacat cgctaagatc atgggttatc tggtcgaagt
      541 ggagtgtgcc gccggccata aaatattttc ccaaggcgac cagggtgatg cgctctatct
      601 gattcaatcc ggcgcggtgg atgtccaagt ggacagtggc ggcggccggt cggaaaccat
      661 cgccgtgctc gggccccagg agtattttgg cgagatggct ttgctctcgt cggcgccccg
      721 ttcggcgacc atgatcgcgg taaaagattg tctggtatgg aaactcagcc gtgagtcctg
      781 ggacgatttg atcgccaagc atgccacctg gctgctgcac ttctgtgcgg tgctgagcca
      841 gcggctctcg gagatggacc ggcaatattc tcagggacgg aatgctttcg attccctggc
      901 ggacgaattt taccgcaaac agccgccggc agtgcagcag ttctatcggc atgcggcgct
      961 attaaccacc ctcgatccgc gcgcggtcgg cgcgctgctc caaactgacg cggcgggcag
     1021 ctatctcgcg gcactggaag cgagccggtt gccgctcatc cgtcgggtca atcatgatga
     1081 ttatgaactg cacggtttct ttcgcgagtt cctgagcgaa aaattgctcg agactgaagg
     1141 tgccgagagt aaagttggct tgcatgtcgc tttcgcggcg cgctacgaag cgctgggcga
     1201 ttggccatcg gcggtcgagc aaagtttggc ggcgaaagac tgggccaacg ccggccgtac
     1261 cctgatcgcc cacaaagacg aggtctcgga gagccgtttg cgagtcgtca aggattgcct
     1321 gggacgcctg cccgccgacg tgttttacag cgatgtgggt ctggtccatt tgcaagtgga
     1381 cacgctttgt cgcctgggcg atagcgccgg cggcctgcgc tgcttaaaag aagcattggc
     1441 gcggcgcgaa gcggttctcg gcgctgccac cgtggcgcgc taccatcacg ccgccgaccg
     1501 gatgttcgcc aggacggatc atgcgcaagc gttgacctac ttgcgcaatg cgttgaattt
     1561 agctgcacaa caggagagcg tcagatctgg ccattcggag agcgaggttg aacgcgcgca
     1621 cggcccatta accgtcgctg cccgcgataa gtcgtcgttg ccggggcaaa gctggttcgc
     1681 gcgttttgcc ggcgcacggg agaagttggc gatcggttct tggttgggcg gagttctcgg
     1741 tgtcggcctg tggggctacc tgtggttttt cacccccgat attggactgt cgccgagcgc
     1801 gaccaagcag ttggccattt tgctcttcac cttggtcttc tgggtgttcc gcgtcctgcc
     1861 ggactacggc gttgcgttga tttttgcttt gggatttatc ctcaccggtc tggccaagcc
     1921 cgaagtagtc ctaggcggct tcgccagcac cacctggttc atgaccctgg gcgtgctcgg
     1981 tctcggcgcg gcgatcacca gcacgggttt gttctaccgt ttttcactcc aattggtgcg
     2041 ctactttccg ctcaaatata actggcaaat tttcgcgctg ggcatcatgg gtatcgtagt
     2101 catggcgttg atcccgcagc agagtgcgcg caccgcgatc atcagccaga tgctgctcaa
     2161 tctgtccgaa agtttgggtt acaaaaatcc gtcgcgcgcg tctaccgggc tattcgtcgc
     2221 aagtttcttg ggtctcggtc agttgggttt tttattctta accggttcga cgaccagttt
     2281 gatcgcctgg gggttactgg ccccggaagt ccgtgggcaa ttcacttggg gctattggtt
     2341 tttggcggcc ttgccgccga cgttgatcgt tagcgtgatc atcgtcggcg ccaccatgct
     2401 gttgtatcaa ccggagtcgc agtcgcagat ttcatacaag atggtgcaga cccagctgga
     2461 gatcctcggg ccgctgtcga agtatgaatg gattactctg gccgtattgt gcgccaccgt
     2521 gaccggctgg ctgaccgggt cgacgcacca aatcgacggc gcctgggtgg cgcttctagc
     2581 cctttgcctg ttgatcaaca ccggcgtgct cggctggggc atgctgaaga agagcatcga
     2641 ttgggaaatg ctcatctaca tgggcgtgac gctgagcatc cccacgctgc tcaccgcggc
     2701 gaagatcgac caatggctgg tcgggctgtt ggcaccgctg gtcgtgccct tcagcgaaac
     2761 gccggcgctg gcgatgatcg tcatcgcgct gatcacctat gcggtcaagc tggtatttac
     2821 cagttttctt accgtcgtga cgttggtcat tgcgctgctg ccgttagcgg gagaactgca
     2881 aatcaatcct tggatcatga ttatgatcgt tctggtcgcg tcggaagttt ggtttttccc
     2941 gttccaagtc gattggcata cgctggccta cgcgaccacc gacggcaagg gctttagcta
     3001 ccgcgacatg aaacgtattc gtttgttcta tgccgcagcc tatctgatcg cgctggttgc
     3061 ggcgattccc tactggcgct acttgggact gatgcgctga gcttcgtggc gttcgtttgc
     3121 ccgcgtcagt ctggattggg tatcatctcg gttagtcatt gcggcggaag cgacaactgg
     3181 acaatggcaa cggacgtgga cactccgact cagacattgg atacggcggt acattccacc
     3241 tacccgattc actttcatgg ccgcggcggg tcgctattcg gcatccagat cgtcaatctg
     3301 ttcttgagct tgattacact cggcatttat tctttttggg gccgggtcaa agtgcgccgc
     3361 tacctggcga gccagagcga atttgccggc gatcgcttcg cttatcacgg caccggccag
     3421 gagttgatga tcggctggac caaggcgatg gtgctttttg gtataccgct gttcgtcttg
     3481 gcggtcttac aggtcatcgt cggcatggag tctgatctgt tcgatgtttt gcagatactt
     3541 atttacatcg ttgtcggtat cttcattccc gtcgccatgg tcaatgcccg gcgctaccgg
     3601 ttgagccgtc tctcttggcg cggtgtgcgt ttttcgtttc gcggcggcgt gcgcgacttc
     3661 atcgcgatct atatcaaagg ttggttgctg acggtggtga gtttgggatt ttactatccg
     3721 ttctggcaga accggcggca gactttcatg gtcgggaatt ccttcttcgg caatcagaaa
     3781 ttcgctttcg acggccgtgg cagcgatctc tttttgacgt ttgttttgca tatgatcctg
     3841 accctgccaa cgttttttct ctgctggctt tggtattggg cgcgggtgca gcgctactac
     3901 gccgaccata cgtcgttcca ggcggcgcgc ttgcgctcga cggttaccgg cggcggcgtg
     3961 ttcggtttgt ggttcggcaa cgcgattctc ttcattctga ccttgggtct cggctggtca
     4021 tggatcaccg tgcgtaacat gcgctactat gccattcacc tgacgatggt cggggcgctc
     4081 gatgtcgccg gtgtcatgca ggaagtccag acggcgacgg cgacgggtga gggactctcg
     4141 ggttttctcg atctcgactt cgatcttggc tgagcaaatt cgcgcacggc aacgatgcaa
     4201 ctgcaatggt tcggctatta cttcgacggt caaagcgcca atcggcgcac ggcgaggatt
     4261 tatctcgagc ccggcaatct gcgcgtcgac ctcgacgacg gcgccatgct tagttggcct
     4321 tacgcggaaa tccggcaaac ccaaggcgcc tatgccggcg accaggtccg gctggagcat
     4381 ggcggcgaac cggccgaagt cttgttgatt gacgacgaca gctttctcac ttccttgcac
     4441 cagctcttgc ccagccgcgc cggtggcttc cacaacccgg ccaagcgaac ccagcgcttc
     4501 cagctcacca tcgtcgccgc ttgcgcttcg gtag
//
LOCUS       DATIRS010000800         2482 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_255485, whole genome shotgun sequence.
ACCESSION   DATIRS010000800 DATIRS010000000
VERSION     DATIRS010000800.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2482)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2482)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2482
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_255485"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1337)
                     /locus_tag="VLM90_10090"
     CDS             complement(<1..1337)
                     /locus_tag="VLM90_10090"
                     /inference="COORDINATES: protein motif:HMM:TIGR02262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016405 - CoA-ligase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="benzoate-CoA ligase family protein"
                     /protein_id="HSQ13362.1"
                     /translation="MDGQPTSLQPYNAAVDLIERNLAERPDKIAYIDEHGSYSFADLA
                     QRMNRAANALTDLGLPMECRVMVALLDTIDFPGVFLGAIKAGLIPIAVNTLLTSNDFD
                     FMLRDSRAQALIVSAPLLPVFKPILGNQPFVKQVVVSGANESKYPSLAELTARASSEF
                     TAAPTRSDDPCFWLYSSGSTGTPKGTVHVQSSMSKTAELYAQPILGIQESDVVFSAAK
                     LFFAYGLGNALSFPLSVGATTILLSDRPTPQSVCRILQEYRPTIFYGVPTLYSALLAS
                     GELPKREASSLRRCTSAGEALPPDVGRRWFEHFGVDILDGLGSTEMLHIFLSNRPDAN
                     RYGTSGTPVPGYQIRLLDEEGKVVAKGDLGELHVNGPTSAACYWNNREKSRNTFIGPW
                     TKSGDKYIESDDGYFTYGGRADDMLKVSGIWVSPFEVESALSSHAAVLEAAVVG"
     gene            complement(1407..2447)
                     /locus_tag="VLM90_10095"
     CDS             complement(1407..2447)
                     /locus_tag="VLM90_10095"
                     /inference="COORDINATES: protein motif:HMM:NF028178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HSQ13363.1"
                     /translation="MEVHRDMAIKRYNSGIQRAKGLLEIAAGLYDSSLSHETRRAAEG
                     VLQTDTRVGRVFRLSLGVRSTEPTDDVPVSFATGSFTEIIAVAEGRYSLAWVNPSAML
                     TMAYRGKGPFKKRLPLRTIATFPSFDVMGFAVRKSTGITSLAQIKQQRVPLRVSTGYL
                     PKSDLTASATMFTVSATLKAAGLTLADIKKWGGKIHSVPRPSDPSRRAAIEDGSIDAV
                     FDEGIKSWGQTAIDNGFRYLPIDGAVLKRLKSLGYRSSAMSRCGFRSMPGEVPTVDFS
                     GWPMIVHAELPNEVAYALCEAIELRKDAIPTDNFKKLDIAQLCRNDNEAPYDVPLHPG
                     AKRFYRDRGYLK"
BASE COUNT          494 a          671 c          785 g          532 t
ORIGIN      
        1 ccgaccaccg cggcttcgag cacggcggcg tgggaactca gcgccgactc cacttcaaat
       61 ggcgaaaccc agatgccgct cactttgagc atgtcgtcgg cgcggccgcc gtaggtgaaa
      121 tagccgtcat cgctctcgat atacttgtcg ccgcttttgg tccatgggcc gataaatgta
      181 ttgcggcttt tttcccggtt gttccagtag caggcggcgc tagtcgggcc attgacatgc
      241 aattcgccga gatcgccttt ggctacaact ttgccttctt cgtcgagtaa acggatttgg
      301 tagcctggca cgggagtgcc ggaagtgccg tagcggttgg cgtccgggcg gttggacaga
      361 aaaatatgca gcatctccgt cgaacccaag ccgtcgagga tatcgacgcc gaagtgttcg
      421 aaccagcgcc ggccgacatc gggcggcagc gcttcgccgg cggatgtaca gcggcgcaga
      481 ctggatgctt cgcgcttggg caattcgccg ctcgctagca gcgcgctgta cagcgtcggt
      541 accccgtaaa aaatcgtcgg gcgatattct tgcaaaatgc ggcagaccga ctgcggcgtc
      601 ggccggtcgc ttaaaagaat tgtcgtcgcg ccaacggaga gcggaaagct caatgcgttg
      661 ccgaggccgt aggcgaaaaa caatttggca gcggagaaga ccacgtcgct ttcttgaatg
      721 ccgagaatcg gttgggcgta gagctcggcg gttttgctca tgctcgactg tacgtggacg
      781 gtgcccttcg gtgttcccgt cgatccggac gagtagagcc aaaagcaggg atcgtcgctg
      841 cgggtcgggg cggcggtaaa ttcgctcgat gctcgggccg ttaattcggc cagcgatgga
      901 tacttggact cattggcgcc ggatacgacg acctgtttga caaacggctg attgcccaag
      961 attggcttga agactggcaa gagcggcgcc gaaacgatca atgcttgggc ccggctgtcg
     1021 cgcagcatga agtcgaagtc gttgctcgtc agtaaagtat tgaccgcgat gggaataagc
     1081 ccggctttga tggcaccgag aaaaactccc ggaaagtcga tggtgtcgag gagcgctacc
     1141 atgacgcggc attccatcgg taggccgagg tcggtcaatg cgttggcggc gcgattcatc
     1201 cgttgcgcca aatcggcaaa gctgtaactg ccgtgttcgt cgatataggc gatcttatcc
     1261 gggcgttccg ctaagttgcg ttcgatcaga tcgaccgcag cgttgtatgg ctgtagagat
     1321 gtcggttgtc cgtccatggc ttcgatttga cggtagatta ctactacagt tgccggtatg
     1381 ccggcaactt gcggttgggc aagcgactac ttgagatagc cgcgatcgcg atagaagcgc
     1441 ttggccccag ggtggagcgg cacatcgtag ggcgcttcgt tgtcattgcg gcaaagctgc
     1501 gcgatgtcga gcttcttgaa attatcagtg gggatcgcat ccttgcgcag ctcgatcgct
     1561 tcacagagcg cgtaggctac ttcgttgggt agttcggcgt gcacgatcat cggccagccg
     1621 ctgaagtcga cggttggaac ctcgcccggc atgctgcgaa agccgcaacg cgacatggca
     1681 ctggagcggt agcctagcga ttttaatcgt ttgagcacgg cgccatcgat gggcagatag
     1741 cggaacccat tgtcgatggc ggtttggccc cagctcttga tcccttcgtc gaacaccgcg
     1801 tcgatggaac catcctcgat ggcggcgcgc cggctgggat cgcttggccg cggcaccgaa
     1861 tgaatcttgc cgccccattt cttaatgtcg gcgagggtga ggccggcggc tttcaaggtc
     1921 gccgacaccg tgaacatggt agcgctggcg gtgagatcgc tcttgggcag ataaccggtg
     1981 gacacgcgca gcggaactcg ttgctgtttg atttgcgcca gagaagtgat gccggtggat
     2041 ttacggacgg cgaagcccat gacatcgaag gaagggaagg tggcgatggt tctgagcggc
     2101 agccgttttt tgaacggccc cttgcctcga taggccatgg tcagcatcgc cgatggattg
     2161 acccaggcca gtgagtacct gccttcggcg accgcgatga tctcagtaaa actgccggtg
     2221 gcgaatgaaa ccgggacgtc atcggtgggt tcggttgatc ttacaccaag cgaaaggcga
     2281 aacactcgac cgacccgggt gtcggtttgc aaaacgccct cggcggcgcg gcgcgtttca
     2341 tgggataacg agctgtcgta aagccccgcc gcgatttcca gtaacccttt agcccgctga
     2401 atcccggagt tgtagcgctt gatcgccatg tctcgatgga cctccacaag aaattcgctt
     2461 taccttaatc gcgatcgttt gg
//
LOCUS       DATIRS010000801         2018 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1042678, whole genome shotgun sequence.
ACCESSION   DATIRS010000801 DATIRS010000000
VERSION     DATIRS010000801.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2018
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1042678"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            304..1758
                     /locus_tag="VLM90_10100"
     CDS             304..1758
                     /locus_tag="VLM90_10100"
                     /inference="COORDINATES: protein motif:HMM:NF014073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HSQ13364.1"
                     /translation="MLDAFISGFWQTVAWPAFGYMLIGIGIGFFVGLLPGIGGLSTLA
                     LMLPFSYSIKEPISAFAFLLGMLAVTSTTGDLTSILFGIPGEGSSAALILDGYPMSKN
                     GEAGRALGAAIMSSVLGSVIGALSLALSIPIMRPLVLLFGSPELFVIAIMGITFIGTL
                     AGPSLIKGLLAGGIGLMLAAIGVDPQTGSLRYTFGTLYLWDRLDLIPVVVGLFAIPEI
                     VDLAVRGTSIASGKTEKLHGVMEGVKDTFRHFWLVVRCSLIGVYFGVLPVLGANVAQW
                     ISYAHAVQGLKDKSQAGKGAMEGLLGPAAANNSTRGGDLIPTIAFGIPGSGAMALLLG
                     AMLIVGLNPGPEMLKSRLDVTFSMVWVLILANLIVAALCFMILNHLAALTFIRGSVLI
                     PFLMFLVFIGSFTANNDLADIVVTLLFGFIGYCMVKFGWPRPPLILGLTLGKIAENYL
                     WISTAAYGAKWLLFPTVLGLIALTIFTVAYPTIK"
BASE COUNT          388 a          595 c          553 g          482 t
ORIGIN      
        1 gggactgccg ccggaacggc tgaagttatt gcgcgaaccc tagccaagaa attctaaaga
       61 cccggagttt gtcgccgcgc taaaaaacgc aactgggcag tggaccccgt cggcggtgaa
      121 gagctacaaa gcctcgccaa ggaagtggtc aaagccggcc agtgtcgtcg cggcgttgaa
      181 acgaatcctg cgccaataat cgcggtcgcc aaaataaagt tttgcggcaa attaggttga
      241 cggttatcgt tagataaggt aatgagcatg agccgttaat cttaacgacg ccaggagaat
      301 ttcatgcttg acgcttttat cagtggattt tggcaaaccg tcgcgtggcc ggccttcggc
      361 tatatgctga tcggtatcgg tatcggtttt tttgtcggct tgctacccgg tattggcgga
      421 ctgtcgacgc tggcgttgat gctgcctttc tcctactcga tcaaagaacc gatttccgcc
      481 tttgcatttc tcctcggcat gctggcggtc accagcacca ccggcgattt aacttcaatt
      541 ctttttggga tccccgggga ggggtcctca gccgccttga tacttgacgg ctacccgatg
      601 tcgaaaaacg gcgaagccgg tcgcgccctt ggtgcggcga ttatgagctc cgtgcttggc
      661 tccgtgattg gcgctctgtc gctggccctg tcgatcccga tcatgcgccc gctggtgcta
      721 ctcttcggct cgccggaatt atttgtcatc gcgatcatgg gcatcacctt catcggcacc
      781 ttggccggcc catcgctgat taaagggttg ctggccggcg gtatcggcct catgctcgcc
      841 gccatcggcg tcgatccgca aaccggctcg ctgcgctaca ccttcggcac gctatatttg
      901 tgggaccggc tcgatctcat cccggtggtc gtcggcctgt tcgccatccc cgagatcgtc
      961 gatctcgctg tccgcggcac cagtatcgcc agcggcaaaa cggaaaagct gcacggcgtc
     1021 atggaaggcg ttaaagatac ctttcgccac ttctggttgg tcgtccgttg cagtttgatt
     1081 ggcgtctact tcggcgtcct gccggtgctt ggcgccaacg tcgcccagtg gatatcgtac
     1141 gctcacgccg tgcaggggtt gaaggacaaa tcccaagccg gcaaaggcgc catggaaggt
     1201 cttctaggcc ccgccgcggc gaacaattcg acccgcggcg gcgatctgat cccaaccatt
     1261 gcattcggca tccctggtag cggcgccatg gcgctcctgt taggtgcaat gttgatcgtc
     1321 ggcttaaacc ccggcccgga gatgctcaag tcgcgcctcg atgtgacatt ctcaatggtc
     1381 tgggtgctga ttttggccaa cctcatcgtc gccgccttgt gtttcatgat tttgaaccac
     1441 ttggcggcgc tgacgtttat ccgcggctcg gtattgatcc cttttctcat gttcttggtt
     1501 tttatcggat cgttcaccgc gaataacgat ctcgccgaca tcgtcgtcac gttgctcttc
     1561 gggttcatcg gttattgcat ggtcaagttc ggctggccgc gcccgccgct gatattgggc
     1621 ctaacgcttg gcaaaatcgc cgaaaactat ctgtggatct ccaccgccgc ctacggcgcc
     1681 aagtggctgc tgttcccgac tgtgctcgga ctgatcgcac tgacgatctt caccgtcgcc
     1741 tacccaacca tcaaataacg gatgggcaga gcgaaatacg aacggccgga agacgcggtt
     1801 tagatttacc ctccaccaaa acactcgaat tcgtctatag tcttgcgcca ggcgtctagg
     1861 gtttatccga acccggacgc cggcgatagg tcccgcggtc atgccgcaag aggcggtaat
     1921 gttccagcgt gcccactcaa taccctaaac acgacctgcc aaaccacttt cagcagttga
     1981 cagccagtca ctttcagtgg gataagcaaa gcatctga
//
LOCUS       DATIRS010000802         4686 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_550381, whole genome shotgun sequence.
ACCESSION   DATIRS010000802 DATIRS010000000
VERSION     DATIRS010000802.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4686)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4686)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4686
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_550381"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..954)
                     /locus_tag="VLM90_10105"
     CDS             complement(<1..954)
                     /locus_tag="VLM90_10105"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13365.1"
                     /translation="MSAVNLANVNIIDADGHVLDRDANLREFIPEPYCRRQGSLLPND
                     VWDASMYGKLITKSPDVPTRLRDMDTEHIDISVLFPTGGFGVTQLPEKDYAAAFCRGY
                     NDWIASICAESPRLKGVGLVPFQDVDAAAKEAQRAIGELGLAGITVGTFGMKEHLGQP
                     MYWPIYEELEKMNVPLLVHNSRQGPAGEIRFDTFLFRHTIGRPFETLLDCAALVYGGV
                     PERFPKLRIAFLECGCGWVPYWMDRMDEEWEKRKAEAPLLKKKPSEYITAGNWFFAAE
                     PEESTVPFCLEKVGEDVILFASDYPHWDGGFPYMTATVKCRN"
     gene            1102..2298
                     /locus_tag="VLM90_10110"
     CDS             1102..2298
                     /locus_tag="VLM90_10110"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSQ13366.1"
                     /translation="MNFHLSAEEESLRQTIAEFVHSELLPLEPEFAYAPDIFEGSRWK
                     SRVKSSSDPEIKRYLEIMEGLQQRAEAKGLWHLDVPKAYGGMAVSNVAMIAVTEELEK
                     SAIPFEFGNHVSNVLFNCQGEQMDKYLWPCIRGEKTSAFGLSEPASGADPSMMQTTAT
                     PDGDYFEINGTKMFPTFADVADFVQLFARLPGTKGREGVTCFLIDTGTPGYRVVRSIA
                     TIAGTEPCELVFADCRVHKSQVLGAVGNGWALNQAWLGARRFQVGIRAHGMAQRVLNA
                     VAQVLRQDAKDAEKYTGTIGHFLGELEALKALTYSASWRADEKMDVRVDAAKVKLFGT
                     ELAHKVIDFALEAVGPSALRKEHVIARAFRHARARRIIEGPSEVQRHIIQRELFRQGT
                     ALLELQ"
     gene            2446..3573
                     /locus_tag="VLM90_10115"
     CDS             2446..3573
                     /locus_tag="VLM90_10115"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSQ13367.1"
                     /translation="MDLQLTEEEKLIKETAAQFVDKELIAREGVYLKQSQPFLPPGAP
                     ERRVLDANVAAELTKKARDIGLWALELPESMGGPAMGHVAQVLIHREFGRSVLPFAPV
                     AIPGFMFETKYGQALAAGELALALAFDEAHKSGSLSHLHMLYRQEPEGAILQDCRLDV
                     YAPQADLFLFPAREQGTQRLGLFVIARDAPGLNILDEADLTTDATVARLTLTHCRIAN
                     EQLLGYEYEAGAIIAAEQLRIAARSLGIGMRCLAASIEHAKNRVTFGRRLAERQAIQW
                     MLADLAIEIRTTTWIAMEAAWRADNDLPYFDEAALAKKRAARMAFQAADSAIQIHGGY
                     GVCKEFPFEGFYREARLARLLYGREEEINRAVGENFVRGKG"
     gene            3728..>4686
                     /locus_tag="VLM90_10120"
     CDS             3728..>4686
                     /locus_tag="VLM90_10120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HSQ13368.1"
                     /translation="MRRKKVCFVGYGSTEYSRKSEESLLGQYAIAIRAALSQTGLKKK
                     DINGLSVTTQASPDTAPHVAEQLGFELDWVLNADYGGASGVGAVSRAADAIECGHLDI
                     ALLLAGNSFDRSVAHQRQLEYQRGNFVDVYGYGGPNSLMALIQRLHMENFGTTLEQVG
                     KIAVAQRFNAINNPQALFREPMSMADYLNSRMISDPVRLFDCVMPCSGAECIILASEE
                     KAKQLTDKLVYLVTDAEKIHYQVANMLPEKTTFGMKLVGEKIFSEVKREDIDLFEIYD
                     DYPIAVMIQIEDFGYCKKGDGGKFVDAHDLTYKGDFPVNTGGG"
BASE COUNT          989 a         1299 c         1452 g          946 t
ORIGIN      
        1 gtttctacac ttgacggtcg ccgtcatata aggaaaaccg ccatcccagt ggggatagtc
       61 ggaagcgaat aaaatgacgt cttcgccgac cttttccaaa caaaaaggca ccgtgctctc
      121 ttccggttcg gcggcaaaaa accaattgcc cgcggtgata tactcgctgg gttttttctt
      181 tagcagcggc gcttcggctt tgcgcttctc ccattcttca tccatgcgat ccatccaata
      241 aggcacccag ccgcagccgc attcgagaaa ggcgatgcgc agtttaggaa accgttccgg
      301 cacgccgcca taaaccagcg ctgcgcaatc tagcaaagtt tcgaagggcc gtccaatggt
      361 atggcgaaat aagaaggtgt cgaagcggat ttctccggcc ggaccctggc gcgagttgtg
      421 caccagcaag ggcacgttca ttttttccag ctcttcgtag atcggccaat acatcggttg
      481 gccgaggtgt tccttcatgc cgaaggtgcc gacggtgatg ccggcgaggc ccagctcacc
      541 gatggcccgc tgggcctctt tggccgcggc atcgacatcc tgaaacggca ccagtccgac
      601 gcctttgagc cttgggcttt cggcgcagat gctggcgatc caatcgttgt agccgcggca
      661 gaaggcggcg gcgtagtctt tctcgggcaa ctgggtgacg ccgaaaccgc cggtgggaaa
      721 cagcacggag atatcgatat gttcggtatc catgtcacgc agacgggtcg gcacatcggg
      781 cgatttcgtg atcagctttc cgtacatgct ggcgtcccag acatcattgg gcaaaagaga
      841 accttggcgc cggcagtagg gctcagggat aaattcgcgc aggttggcat cgcggtccag
      901 gacatgacca tcggcgtcga tgatgttgac gttggccaaa ttgacggcag acatgggacc
      961 tccggagctt gcggcgactg agtacgatgt ttcgatagct gatcggatta gcacaggggt
     1021 gaatcgacgg tcaatgcctg tttactgttt ttttgtccga gcaagctgtg ataaaggggc
     1081 ggagggagat tgcgtcgcgc catgaatttt catttgtcgg ctgaagaaga gagtttgcgc
     1141 caaacgatcg ccgagttcgt gcatagcgaa ctgttgccgc tggagcccga gttcgcctat
     1201 gcgccggata ttttcgaggg tagccggtgg aagagccggg tgaaatcgag cagtgatccg
     1261 gagatcaagc gctatctcga gattatggaa gggttgcagc agcgtgctga ggccaagggc
     1321 ttgtggcatt tggacgtgcc caaagcctac ggcggcatgg cggtcagcaa cgtcgccatg
     1381 atcgcggtca ccgaggagtt ggagaagagc gcgatcccgt tcgagttcgg caatcatgtc
     1441 tcgaacgtct tgttcaattg ccaaggcgaa caaatggata aatatctctg gccgtgcatt
     1501 cgcggcgaga aaacttccgc tttcggcctg agcgagccgg cgtcgggcgc ggacccatcg
     1561 atgatgcaga ccacggcgac accggacggc gactatttcg agatcaatgg caccaagatg
     1621 tttccgacct tcgccgatgt cgctgacttc gtccaactgt tcgcccgttt gccgggcacc
     1681 aaagggcgcg agggggtgac ctgttttctc atcgacaccg gcacgccggg ttatcgcgtc
     1741 gtgcgcagca tcgcgaccat cgccggcacc gagccttgcg agctggtttt tgcagactgc
     1801 cgggtgcaca agtcgcaagt gctgggcgca gtgggcaacg gctgggcgct caatcaggcg
     1861 tggcttggcg cgcgccgttt ccaagtcggt atccgcgccc atggcatggc ccagcgcgtg
     1921 ctcaatgccg tcgcccaggt gctgcgccag gacgccaaag atgcggagaa atacactggc
     1981 accatcggtc attttctagg tgaattggaa gcgctcaagg cgctcaccta ctcggcctcc
     2041 tggcgcgccg acgagaaaat ggacgtgcgc gtcgacgccg cgaaagttaa gctgttcggc
     2101 accgagctgg cgcataaagt gatcgacttc gcgctcgaag cggtgggacc gtcggcgctg
     2161 cgcaaggaac atgtgatcgc gcgcgccttc cgccacgccc gggcgcggcg gatcatcgag
     2221 gggccgtcgg aagtgcagcg ccatatcatt cagcgcgaac tgtttcgcca aggaacggca
     2281 ctgctggaat tgcagtgaga gtagaagagg ctttggccgc aaagaacgca aagggcgcaa
     2341 aaaaacaaat cggaaatgta ggggcaaccc cctgtggttg cccttcttac aaatagattc
     2401 gaaaccttcg tgtccttcgt gccttcgtgg tggattatta atcatatgga cctgcaactg
     2461 actgaagaag aaaagctcat caaagaaacc gcggcgcagt tcgtcgataa ggaactgatc
     2521 gcccgcgaag gcgtctattt gaagcaatcc cagccattcc tgccgcccgg ggcgccggag
     2581 cggcgcgtgc tcgatgccaa cgtcgccgcc gagcttacca agaaagcgcg cgacatcggt
     2641 ctatgggcct tggagctgcc ggaatccatg ggcgggccgg ccatgggtca tgtcgcccag
     2701 gttttgattc accgcgaatt tggccgttcg gtgttgccct tcgcgccggt ggcgatcccc
     2761 ggattcatgt tcgagaccaa atatggccag gcgctggccg ccggcgagct ggcgctggcg
     2821 ctggcatttg acgaagcgca taagagcggc agcttgtctc acctgcacat gctctatcgc
     2881 caggagcctg aaggggcgat tctgcaagat tgccgcttgg acgtgtacgc gccccaggcc
     2941 gatctgtttc ttttcccggc gcgggagcag ggcacgcagc gtttgggcct gttcgtcatc
     3001 gcgcgcgacg cgcccgggct caacatcctt gacgaggccg acctgacaac cgatgcgacc
     3061 gtggccaggc tgacgttgac ccattgccgc atcgctaacg agcagctgct cggctacgag
     3121 tatgaagcgg gcgcgatcat cgccgccgaa cagctccgga tcgcggcgcg atcgttgggc
     3181 atcggcatgc gttgtctggc ggcgtccatt gagcatgcga aaaatcgcgt caccttcggc
     3241 cggcgcttgg cggagcgcca ggcgattcaa tggatgctgg ccgatctggc catcgagatt
     3301 cgcacgacca cttggatcgc catggaagcg gcttggcgcg ccgacaacga tctgccttac
     3361 ttcgacgagg cagcgcttgc caagaaacgt gccgcgcgca tggccttcca agccgccgac
     3421 agcgcgattc agattcacgg cggttacggc gtctgcaagg aattcccgtt tgaaggtttc
     3481 tatcgcgagg cgcgattagc gcggctgctc tatggccgcg aagaagagat aaatcgggcg
     3541 gtgggggaga atttcgtcag gggtaaaggg taagtgtgat attggggaat tttggatttt
     3601 cgattttgga ttttagattg aagaaagacg gacggagtta agccgaaccc cagtgataaa
     3661 aggtaggagc ctcagctcct aaaacgtttt gaacggcttg aacccgatag acgagaggga
     3721 gaaaaagatg agacgcaaaa aggtttgttt tgtcggctac gggtcgacgg aatactcgcg
     3781 caaatcagag gagtcgctgc tcggccagta tgccatcgcg attcgcgcgg cattgagtca
     3841 gactggactc aagaagaaag acatcaacgg cttgtcggtg acgacccagg cgagtcccga
     3901 cacggcgccg catgtcgccg agcagttggg tttcgagctc gattgggtgc tcaacgccga
     3961 ctacggcggt gccagcggcg tcggcgcggt gagccgggcg gcggacgcca tcgaatgcgg
     4021 ccatctcgat atcgccttgc tgctggcggg caactctttc gaccgcagcg tcgcccatca
     4081 acggcagctg gagtatcagc gcggcaattt cgtcgatgtc tacggctacg gcgggcccaa
     4141 ttcgctgatg gcgttgatcc aacgcttgca catggagaac ttcggcacga ccctggagca
     4201 ggtcggcaag atcgccgtgg cgcagcgctt caacgcgatc aacaatccgc aggcgctatt
     4261 ccgcgagccg atgtcgatgg cggattatct gaactctcgg atgatctccg atccggtgcg
     4321 cttgttcgac tgcgtcatgc cttgctccgg cgccgaatgc atcatcctgg cgtcggaaga
     4381 gaaggccaaa cagctcaccg acaagctggt ttatttagtc accgacgccg agaagattca
     4441 ttatcaggtc gccaacatgc tgccggagaa aaccaccttc ggcatgaaac tggtgggcga
     4501 aaagattttc tctgaagtga agcgcgagga tatcgacctg ttcgagatct acgacgacta
     4561 tccgatcgcc gtcatgattc agatcgagga cttcggttac tgcaaaaaag gcgacggcgg
     4621 caagtttgtc gacgcccacg atcttactta caaaggcgac ttcccggtca acaccggcgg
     4681 cggcga
//
LOCUS       DATIRS010000803         3486 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_550496, whole genome shotgun sequence.
ACCESSION   DATIRS010000803 DATIRS010000000
VERSION     DATIRS010000803.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3486)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3486)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3486
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_550496"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1300)
                     /locus_tag="VLM90_10125"
     CDS             complement(<1..1300)
                     /locus_tag="VLM90_10125"
                     /inference="COORDINATES: protein motif:HMM:NF014206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009428 - bacterial-type flagellum basal
                     body, distal rod, P ring [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
                     /protein_id="HSQ13369.1"
                     /translation="MNNSRLNWRLMFVRAAAFLLLPLVFCLDASAARLKDLAQIEGFR
                     ANQLIGYGLVVGLNGTGDRQNTEFTVQSLTNLLQDYSLRLNPADVDVKNVAAVMVTTE
                     VPAFVQPGTRLDATISSIGDATSLSGGILLLTPLKGPDGKVYAVAQGPVSLGGGYTAI
                     GINAKITKNHQTAGRVTAGALLERGIASNVVSREGQIRINLNKPDFTTARRVAEALNK
                     GPLQIGAQALSPGVVTVGLPENYKDRAVDFIAALESVEIAPDNIARIVINERTGTVII
                     SKDVRIAPVAVAHAGLHITVKTDLNVSQPNPWGRGQTVVVPDTTVTIKEPESRQLVEL
                     PGGAGVSLNQLVQALNSLGVTPRLQGNWVWQFDLHDRDKITLHDDQFSLQRAGFAQRL
                     EDRDQIPRRHAQRVERLNKLIERDTRPAGQFDQLPAFRLFD"
     gene            complement(1346..2002)
                     /locus_tag="VLM90_10130"
     CDS             complement(1346..2002)
                     /locus_tag="VLM90_10130"
                     /inference="COORDINATES: protein motif:HMM:NF014195.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009427 - bacterial-type flagellum basal
                     body, distal rod, L ring [Evidence IEA];
                     GO_function: GO:0003774 - cytoskeletal motor activity
                     [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HSQ13370.1"
                     /translation="MIEKRFFPKPSELEMAREVGRLGQTDVTAKSNQPASQGSLWPAD
                     DHVFFYADKKALRMGDILTVRIIESTQANNTADTDLSRNSSANASFSTFFGKKKFLNL
                     FKLSEDLLATTSENSHQGAGVTTRSGQLTATMTAVVREVLPNGNLVVQGTREVLVNHE
                     QQFMTLTGVVRPQEVSRDNIVLSTQLADANISIGGLGVVADKQRSGWGTWLFDLVWPF
                     "
     gene            complement(2059..2811)
                     /gene="flgA"
                     /locus_tag="VLM90_10135"
     CDS             complement(2059..2811)
                     /gene="flgA"
                     /locus_tag="VLM90_10135"
                     /inference="COORDINATES: protein motif:HMM:TIGR03170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009428 - bacterial-type flagellum basal
                     body, distal rod, P ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation chaperone
                     FlgA"
                     /protein_id="HSQ13371.1"
                     /translation="MNSTYWFTYGRPREILASVGRWLLALLLGLALSVQADGSQTQPL
                     DSGAVEALLLRHMRQAEPRRLENLELRVLPFQPVLLPAGVARLRVVQSARGGAGVQSF
                     LIVAHVGAKEEARFWVKAEVRVYDQVVVAARPIGRQETLSAKDLRLERREITSRTAQF
                     FTRLDDVAGKQSTRSIQSDDVITANAIERPTLLKRGSPITLVFDSGSLRVETQGVAEE
                     GGRMGDLIQVKNFTSGKMLRGVVLDERNVKVN"
     gene            complement(2824..>3486)
                     /gene="flgG"
                     /locus_tag="VLM90_10140"
     CDS             complement(2824..>3486)
                     /gene="flgG"
                     /locus_tag="VLM90_10140"
                     /inference="COORDINATES: protein motif:HMM:TIGR02488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009426 - bacterial-type flagellum basal
                     body, distal rod [Evidence IEA];
                     GO_process: GO:0071973 - bacterial-type
                     flagellum-dependent cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
                     /protein_id="HSQ13372.1"
                     /translation="LVYETLQAPGASSAQGQEIPTGFQVGQGTRAVATQRLFIKGDMQ
                     QTGNSLDMAIEGDGFFQVTLPSGDTGYTRAGTFKKNSQGQMVTSDGFTLQPQITIPQN
                     AVNVVIGVDGIVSITVAGQTQPQQVGSIELARFINPAGLLSQGRNVFLPTQASGDATV
                     GTPGRDGLGTLIQGFVEGSNVNVVEEMVGLITSQRAYEINSRAIRTADEMMQTANNLI
                     RG"
BASE COUNT          706 a         1038 c          986 g          756 t
ORIGIN      
        1 catcaaagag ccggaaagcc ggcaattggt cgaattgccc ggcgggccgg gtgtctcgct
       61 caatcaactt gttcaagcgc tcaactcgtt gggcgtgacg ccgcgggatt tgatcgcggt
      121 cttcgaggcg ttgcgcgaag ccggcgcgct gcaagctgaa ctgatcgtca tgtagcgtaa
      181 ttttgtcacg atcatggaga tcaaattgcc aaacccaatt gccttgcagc cgcggcgtca
      241 cacccaacga gttgagcgct tgaacaagtt gattgagcga gacacccgcc ccgccgggca
      301 attcgaccaa ttgccggctt tccggctctt tgatggtgac ggtagtgtct ggcaccacca
      361 cggtttgacc acgcccccag ggattgggct gagaaacgtt caagtcagtc ttcaccgtaa
      421 tatgcagccc ggcgtgagcc actgccaccg gggctatgcg cacatccttg ctgataatca
      481 ccgtgccggt tcgttcgttg atgacaattc gcgcgatgtt gtccggggca atttcaaccg
      541 attccaaggc ggcgataaaa tccacggctc gatctttgta attctccggc agtccaacgg
      601 tcacgacgcc aggcgaaagc gcttgagcac cgatctgcag cggtccctta tttaaggctt
      661 cggccacccg ccgcgcggtg gtaaaatctg gcttgttcaa attgatgcga atttgtccct
      721 cgcgcgaaac gacattggac gcgatcccgc gttcgagcaa cgcgccggcg gttactcgtc
      781 ccgcggtctg gtggttcttg gtaatcttgg cattaatccc aatagcggta tagccaccgc
      841 ctaaactcac cggcccttgg gccacggcgt agaccttgcc atcaggccct ttgagcggcg
      901 tcaagagcaa gattccgccc gataagctcg tggcatcgcc gatcgaagaa atagttgcgt
      961 cgagtcgggt tcccggttgg acaaaagccg gcacttccgt ggtaaccatc actgcggcga
     1021 cgttttttac gtccacgtca gccgggttga ggcggaggct atagtcttgc agcagattgg
     1081 tcaggctctg cacggtaaat tcggtgttct gccgatcgcc cgtgccgttt agaccaacca
     1141 ccaagccata gccgatcaat tgattggcgc ggaacccttc gatctgagcc aaatccttaa
     1201 gccgcgcggc gctggcgtca aggcaaaaga ccaaaggcaa gagtaaaaat gccgccgcac
     1261 ggacaaacat cagccgccaa ttcaggcgtg aattattcat cgagtttcgc gaaatatgaa
     1321 ttatcaattt tccattttcc attcgttaga acggccagac gagatcgaac agccaggtgc
     1381 cccagccgga tctttgcttg tcagccacca cgccgagacc gccgatggag atattggcgt
     1441 cggccaattg agtcgacaga acaatgttgt cgcggcttac ctcctgcggc cgcacgacac
     1501 ccgtgagggt cataaactgc tgctcatgat tgaccagaac ttcccgagtg ccttgaacga
     1561 ccaggttgcc attgggcaat acctcgcgca ccactgcggt catggtcgcg gtcagctgac
     1621 cgctgcgggt tgtcacgccc gccccctgat gactgttctc cgatgtggtt gctaaaaggt
     1681 cctcgcttaa cttgaaaagg tttagaaact tctttttacc gaagaacgtg ctgaagctgg
     1741 cattggccga agagttgcgc gacaggtcgg tgtctgcggt attgttcgcc tgcgtgcttt
     1801 caatgatgcg cacggtgagg atatcgccca tccgtagagc ttttttatcg gcgtaaaaaa
     1861 acacgtgatc gtcggccggc catagcgaac cttgcgacgc cggttgattg cttttggccg
     1921 tcacgtcggt ttgtccgagc cgccccactt ctcgggccat ctccagttcg ctgggcttgg
     1981 ggaaaaatct tttttcgatc atcggcccac aagccgcgag cgtcaaggct aacggccaga
     2041 ctgcaatata tcggcgcatc agtttacctt cacgttgcgc tcgtcgagca ccacaccgcg
     2101 caacattttc cctgaagtga aatttttcac ctgaatcaag tcgcccatcc taccgccctc
     2161 ttcggcgacg ccctgggttt ctacccgtag gctgccggaa tcgaaaacca aggttatcgg
     2221 actgccgcgc ttgagtagcg tcggtcgctc gatggcgttg gcggtaatga catcgtcgct
     2281 ctggatggag cgggtggatt gtttaccggc tacgtcgtcg aggcgggtaa agaactgcgc
     2341 cgtgcggctg gtgatttcgc gccgctccag gcgcaagtct ttcgcactaa gagtttcttg
     2401 gcgcccgatc ggccgggccg ccaccaccac ttgatcgtaa acccgaacct ccgccttcac
     2461 ccaaaagcgc gcctcttcct tcgcgccgac atgggcaacg atgagaaaac tctgcacacc
     2521 ggcgccgccg cgcgccgact gcaccacccg caggcgcgct acgccggccg gcagcagcac
     2581 cggttggaac ggcagcacgc ggagctcgag attctccagc cgccgaggtt ccgcttggcg
     2641 catatgacgg agcagaagtg cctccaccgc gccgctgtcg agcggctggg tctggctgcc
     2701 gtcggcttgc accgacaacg ccaaaccgag cagtagcgcc aagagccagc ggccgacgct
     2761 ggcaagaatt tctcgcggcc gcccgtaggt aaaccagtaa gtagaattca taaacgctta
     2821 cccttatcct cggatcaagt tgttggccgt ctgcatcatt tcatcggcgg tgcgaatcgc
     2881 ccgcgaattg atctcgtagg cgcgctggct ggtaatcaaa ccgaccatct cttcgaccac
     2941 attgacgttg gaaccttcga cgaaaccttg gatcagcgtg cccaagccat cccgtccggg
     3001 agtgccgacg gtggcatcgc cggatgcctg ggtgggcaga aacacgttgc gaccctggct
     3061 tagcaggccg gccggattga tgaagcgcgc cagctcgatg ctgccaacct gttgcggctg
     3121 ggtttggccc gccacggtaa ttgagacgat gccgtcgaca ccgattacga cgttcacggc
     3181 attttgcgga atggtgattt gcggctgcaa cgtaaacccg tcgctggtta ccatctgccc
     3241 ctggctgttc ttcttaaatg tgccggcgcg ggtgtagccg gtgtcgccgc tcggcagcgt
     3301 aacttgaaaa aaaccgtcgc cttcgatggc catatcgagg gagttgccgg tctgctgcat
     3361 gtcgcctttg atgaacagcc gttgagtcgc taccgcacgg gtgccctggc caacttgaaa
     3421 tcctgtgggg atctcttgac cttgggccga cgacgcgccg ggagcctgta gagtttcgta
     3481 aaccag
//
LOCUS       DATIRS010000804         1557 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_453217, whole genome shotgun sequence.
ACCESSION   DATIRS010000804 DATIRS010000000
VERSION     DATIRS010000804.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1557)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1557)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1557
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_453217"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..259
                     /locus_tag="VLM90_10145"
     CDS             <1..259
                     /locus_tag="VLM90_10145"
                     /inference="COORDINATES: protein motif:HMM:NF022059.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NADH-ubiquinone oxidoreductase-F iron-sulfur
                     binding region domain-containing protein"
                     /protein_id="HSQ13373.1"
                     /translation="AHESCGQCSPCREGCHWMEKIFYRVEHGGAQKNDLDLILNIAGN
                     IAGNTICPFGDAAAMPAGAFIRKYRDEFEAHIAAGKCTVRG"
     gene            350..>1557
                     /locus_tag="VLM90_10150"
     CDS             350..>1557
                     /locus_tag="VLM90_10150"
                     /inference="COORDINATES: protein motif:HMM:NF024900.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HSQ13374.1"
                     /translation="MDPVKIIVDGQEVVTSKGKTVIQAAAEAGVSIPHYCYHPKLSIA
                     GNCRMCMVEIEKMPKLQIACNTQVTEGMSILTQSAKVVAVRKAVLEFLLINHPVDCPI
                     CDQAGECQLQNYYMEHNREESRLEVGKIHDRKKTIFGPNVVFDGERCIKCTRCVRFCQ
                     EITKTHELAVVNRGDHSTISLFDDAVLDNPLSANVVDICPVGALTDRDFRFKVRVWYL
                     DKTPSICPGCSTGCNISVEAYQNKIARFKPRVNEAVNSHWICDEGRYCFHDLAGGERL
                     TTPLIRQEGGLVPTTLEVALPAVINGLRGAQPLAGILSGRSTNEEAYLFAKLRPELAK
                     DWSMEVFYQERQLTEVQKILMSPDRSPNFRGACDMGVSSSGGFARLMQELAGNNFSSA
                     FIVGEDLLGA"
BASE COUNT          353 a          439 c          459 g          306 t
ORIGIN      
        1 cgcccatgag tcctgcggcc aatgcagtcc ctgccgcgaa ggctgccact ggatggaaaa
       61 gattttttac cgcgtcgaac atggcggcgc acaaaagaac gatttagatc tgattctcaa
      121 cattgccggc aacatcgccg gcaatacgat ctgtccgttc ggcgacgccg cggcgatgcc
      181 ggcgggagcg tttatcagaa aataccgcga cgagttcgaa gcgcatatcg cggcggggaa
      241 atgcacggtg agaggttagg aatggagtac tggagtatcg gtgcaatgga gtgatggggc
      301 cggacccaat actccaacac tccagtactc catcactcca atcttcatta tggatccagt
      361 aaaaatcatt gttgacggcc aagaagtcgt cactagcaaa ggcaagaccg tgattcaggc
      421 ggcggccgag gccggggtgt cgatcccgca ttactgctat cacccgaagc tgtccatcgc
      481 cggcaactgc cgcatgtgca tggtcgagat cgaaaaaatg cccaagctgc agattgcctg
      541 caatacccag gtgaccgagg gcatgtcgat cctgacccag agtgccaagg tggtggcggt
      601 gcgcaaagcg gtgttggaat ttctgctgat caatcacccg gtggattgcc cgatctgcga
      661 ccaggccggc gagtgccagt tgcagaatta ctatatggag cataaccgcg aggagagccg
      721 cctcgaagtc ggcaagatcc acgaccgtaa gaagaccata ttcggcccca acgtggtatt
      781 cgacggcgag cgctgcatca agtgcacccg ctgcgtgcgc ttttgccaag agatcaccaa
      841 gacccatgag ctggcggtgg tcaaccgcgg tgatcactca acgatttcac tattcgacga
      901 tgccgtgctc gacaacccgt tatccgccaa cgtcgtcgac atttgcccgg tgggcgcgct
      961 caccgaccgg gattttcgct tcaaggtgcg ggtctggtat ttggacaaga ccccgtccat
     1021 ctgtccgggc tgcagcaccg gctgcaacat cagcgtcgag gcctatcaaa acaaaatcgc
     1081 gcgtttcaaa ccgcgcgtga acgaagcggt caacagccac tggatctgcg acgaggggcg
     1141 ttactgtttt cacgatctcg ccggcggcga gcgactgacc acgccgctta ttcgccagga
     1201 aggcggactg gtgccgacga ctttggaggt ggcgttgcca gccgtgatca atggtctgcg
     1261 tggcgcgcag ccgctggcgg gaattctttc cgggcgcagt accaacgaag aggcgtactt
     1321 gttcgccaag ctaaggcccg agctcgccaa ggattggtcc atggaagttt tctatcagga
     1381 acgccaactc accgaagttc aaaagattct aatgagcccg gaccggtcgc cgaatttccg
     1441 cggcgcgtgc gatatgggag ttagtagcag cggcggtttc gcccggctaa tgcaagaatt
     1501 ggccggcaac aacttttcca gcgccttcat cgtcggcgag gatttgctcg gagccaa
//
LOCUS       DATIRS010000805         2079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1141757, whole genome shotgun sequence.
ACCESSION   DATIRS010000805 DATIRS010000000
VERSION     DATIRS010000805.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2079
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1141757"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..1034)
                     /locus_tag="VLM90_10155"
     CDS             complement(72..1034)
                     /locus_tag="VLM90_10155"
                     /inference="COORDINATES: protein motif:HMM:NF014476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine cyclodeaminase family protein"
                     /protein_id="HSQ13375.1"
                     /translation="MALLLSRDELKPLLGLAQAIELIEDAHRQQAAGQIVPHAPYHVT
                     VGPSKGLRIVSGAVLKQHRVGVRMGPNSGLGGGDKMYATLFDADGGELLAFMGFPFGT
                     LRTAAVVAIAAKHMAREDSKKLGLFGVGRNAFGILKALQSVRPINEIVVSSRDPERRK
                     KFCAEGEQLLGITVRGVDKPEHAVRGMDVILTATNSLTPIFPDDWVEPGTHVSSMGKP
                     TELSRGLHLKAARTVVGSQEQERNYADKSAALPLVELVAEGKLSWSRVPELGELVTGQ
                     AVGRANRDEINIFRESQGGYGDMALAAWLYDEAVQRGLGKKMDL"
     gene            complement(1208..1834)
                     /locus_tag="VLM90_10160"
                     /pseudo
     CDS             complement(1208..1834)
                     /locus_tag="VLM90_10160"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
     gene            complement(1850..>2079)
                     /locus_tag="VLM90_10165"
     CDS             complement(1850..>2079)
                     /locus_tag="VLM90_10165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13376.1"
                     /translation="GRIGITGLGEVEGTRTPEGTIFYGTWKQIREGFPQAQLVDATAI
                     LDEVRYVKSAEEIDVLTKSMEINELAIQAEI"
BASE COUNT          391 a          696 c          555 g          437 t
ORIGIN      
        1 cgctgttccg agccttgaac ttttgaaccc ttcgacatac tcagggcagg ctcttgaacc
       61 cttgaacgag tttagagatc catcttcttt cccaacccac gctgcaccgc ttcatcataa
      121 agccaagccg ccaacgccat gtcaccatag ccgccctggg actcgcgaaa aatattgatc
      181 tcgtcccggt tggcgcgccc gaccgcctgg ccggtgacca actcaccgag ttcgggcacc
      241 cggctccaag aaagtttgcc ttcggcgacg agttcgacca acggcagtgc tgccgatttg
      301 tcggcgtagt tgcgctcctg ctcttggctg ccgaccacgg tgcgcgcggc tttcaaatgc
      361 agcccgcggc tcaactctgt cggcttgccc atgctgctca catgggtgcc cggctcgacc
      421 caatcgtcgg gaaagatcgg cgtcagcgag ttggtcgcgg tgagaataac atccatgccg
      481 cgcaccgcat gctcgggctt gtcgacgccg cgcacggtga tgccgagcaa ttgctcgccc
      541 tcggcgcaaa atttcttgcg ccgctcggga tcgcggctcg acacgacgat ctcattgatt
      601 ggacggacgg attgcagcgc cttgagaatg ccgaaggcat tgcgccccac gccaaacaag
      661 ccgagcttct tagagtcttc ccgcgccata tgtttggccg cgatggccac cacggcggca
      721 gttcgcagcg tgccgaaggg aaaacccatg aacgccaaca gctcgccgcc atcggcatcg
      781 aacagcgtcg cgtacatttt atcgccgccg cccagcccgc tgttgggccc catccggacg
      841 cctacgcgat gttgtttgag caccgcgccg gacacgatgc gcaatccttt gctcggcccg
      901 accgtcacat gatacggcgc atggggcacg atctggcccg cggcctgctg tcgatgggca
      961 tcctcgatca actcgatggc ctgggcgaga ccgagcagcg gtttcaattc atcacgactt
     1021 agtaataagg ccatcgttaa ctccgatttt gcagcagact aactcggtcg acaaccttca
     1081 ctccgttgag tatgacagta aagttttgct gtcattacga gcaacgcgag gaatctcgtc
     1141 ttaaaagcgc gcgcgcaaat acctctccgc catgtccgac cttgaacttt tgaaccttga
     1201 acggcggtta cttctgagta accgcgagct catgcgcccg cttgccgagc cgccgtccac
     1261 cgctcttggt cacgactacg gtatcgcccc actggcaaat atactcgccg tcagccgaga
     1321 tcgccgaggg cttgcagata aacaccatat tctcgcgcat cgccaccgcc agctggcgcg
     1381 ggctcttggc gtggggcgtg atgatcggtc cgtcgtcgcc ctggccgcgg ccatgcatat
     1441 tgagctcgcc gcgggcaccc gccgccgggc cgcttttcgg cgctgcactt tgcacggcac
     1501 tcttggtcaa ctcggctaac tcgcccaccg tcacgccggg ctgcaaattt tccaccacgc
     1561 gattgaaaac ttcccgctgc actttaatca gctcggcctg cactggatcg atcacttcga
     1621 caaacaccgg ctgcacgccc tgggcgcgat agccgatcca tgacgcttcg atctcattga
     1681 tgatcgcgtc gccgcgctcg agcagccgca tgctcggccg ggtcagcgtg cgcttgggat
     1741 tttttcccga cacccagaaa cagtgtaccg gcaactcgga accgttgcgc gtcatggcgt
     1801 aatgcatggc cgcccaaact tcccaatcct tgacgccaac cttggccgct tagatctcgg
     1861 cctgaatcgc cagctcgttg atctccatcg acttggtgag cacgtcaatt tcttctgcgc
     1921 tcttcacata gcgcacttca tcgaggatcg ccgtagcgtc gaccaattgc gcctgcggaa
     1981 acccttcgcg gatctgcttc caggtgccgt aaaagatcgt tccttccggt gtgcgcgtgc
     2041 cttcgacctc gccgagaccg gtgataccga tccggccat
//
LOCUS       DATIRS010000806         2017 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_453327, whole genome shotgun sequence.
ACCESSION   DATIRS010000806 DATIRS010000000
VERSION     DATIRS010000806.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2017
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_453327"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..935
                     /locus_tag="VLM90_10170"
     CDS             <1..935
                     /locus_tag="VLM90_10170"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HSQ13377.1"
                     /translation="VAGPYNSGATAGRSASEVAFKFLTTPLLLPINEGSFRPLKINLP
                     PGRVVSATKPAPVRTWMTVPMTVADTIFKALAQACPDNVLAGHHADLAAPRTFGLDPK
                     SGRSFHFPPMLSGGGWGALSDTDGQNATFCINDGDTHNTPVEAGEGRAPIFVSYRKLR
                     QDSGGPGKFRGGLGVSQEVRLLSAGSVLSAMERALCPPWGLYGGQDALANRFTVVRKD
                     GAVEPMKTGKTPGIIALQEGDGFLIEVGGGGGFWNAMERNPARVLADVRSGYVSVAAA
                     RADYGVAIRQSGRKFELDVAATAELRGSRRSEEI"
     gene            1568..>2017
                     /locus_tag="VLM90_10175"
     CDS             1568..>2017
                     /locus_tag="VLM90_10175"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSQ13378.1"
                     /translation="MQQLSSNVLIETRQKGANHGLVATSDGLVLIDTPHRPSDAVRLK
                     AEIERRGKLRYIINTEPHGDHWTGNAFFDVPVVAHEGVRKRMLAANMTEHLARVASFG
                     PEEPKLLENYRANAPVITFESEMKLHVGNHTFRMIHMPGHTPYQAAVI"
BASE COUNT          435 a          543 c          634 g          405 t
ORIGIN      
        1 aggtggctgg gccgtacaat tccggcgcca ccgctgggcg ttcggcttct gaagtggcat
       61 tcaaattcct caccacgcca ttgttgttgc cgatcaatga aggttcgttt cggccgttga
      121 aaatcaattt gccgccgggc cgggtggtca gcgcgaccaa gccggcgccg gtgcgcacct
      181 ggatgacggt gccgatgacc gtcgctgaca cgatcttcaa agccttggcg caagcctgtc
      241 ccgataacgt cctggccggt catcatgccg acttggccgc gccgcgcacc ttcggtctcg
      301 atcccaagag cggccgttcg tttcatttcc cgccgatgct gtcaggcggc ggttggggcg
      361 cgttatccga caccgacggc cagaacgcga ccttctgtat caacgacggc gacacccata
      421 acacgccggt ggaagcgggc gaggggcgcg cgccgatctt tgtttcctac cgcaagctgc
      481 gccaggactc gggcgggccg ggaaagttcc gcggcggtct cggggtgtcg caggaagtgc
      541 gtttgctctc ggcaggcagc gtcttgtcgg cgatggagcg ggcgctctgt ccgccctggg
      601 gactgtatgg cggccaggac gcgctggcca atcgctttac cgtcgttcgc aaagacggcg
      661 cagtcgagcc catgaagacc ggcaagactc ccggcatcat tgctttgcag gaaggcgacg
      721 gttttttgat cgaagtcggc ggcggcggcg gcttttggaa cgccatggaa cgcaatcccg
      781 cgcgcgtgct cgccgacgtg cgctcaggct atgtatccgt cgcagcggcg cgcgcggact
      841 atggcgtggc gatacggcaa tcgggtagaa aattcgagtt ggatgtggcg gccacagcgg
      901 agttgcgcgg tagtcgaaga agtgaagaga tttaaccaca aagagcacat agatcacaaa
      961 gtgaggcagt gggattcgga atatctcgcg caaagcacgc aaagggcgca aggaagaacg
     1021 ttgtcatttc gaacggagag agaaatcctt cttagatctt ttgcattcgc ttaggatgac
     1081 aggcctctgg cccttcactt cgcgaccttg gcggccttgg cgcgaggaat atccgaatcc
     1141 aagggtctag gctcccggac aatttgcgca agcctcgcaa attatcccgg tagtgcatag
     1201 atcacaaagt aaggcagtgg gattcgaaat atctcgcgca aagcacgcaa agttaggaac
     1261 tgttttgtcg gggcgtgtgg catacgccct tattcgcagc taaggatgac gtttgttaaa
     1321 ccacgaagga cacgaaggtc ggaagaagag ttagccgcag agggcgcaaa gaagtcatac
     1381 gaaaatttcg gaatatctct cgcaaaggcg caaaggtaac gggcctgagc ccgtcactcg
     1441 gagcggatgc gagggaacta ggatagattt ctccctttgg acgaaatgac aacgtttccg
     1501 aacttggcgt ctttgcgcct ttgcgggaaa acatttcttt cccggcttga taataggatg
     1561 gtgaatcatg cagcagctta gcagcaacgt actcatcgaa actcggcaga agggcgccaa
     1621 tcatgggctg gtggcgactt cggatgggct ggtgcttatc gacacgccgc ataggccgag
     1681 cgatgcggtg cgcttgaagg cggaaatcga gcggcgcggc aagttgcgct acatcatcaa
     1741 caccgagccc catggcgatc attggaccgg caacgcgttt ttcgatgttc cggtagttgc
     1801 tcacgaaggg gtgaggaagc gcatgctggc ggcgaacatg accgagcact tagcgcgggt
     1861 cgcgtcgttt gggccggagg agccgaagtt attggaaaac taccgggcca acgcgccggt
     1921 gattaccttt gaaagcgaaa tgaagctgca tgtcggcaat cacacctttc gcatgatcca
     1981 catgcccggc catacgccct atcaggccgc ggtgatt
//
LOCUS       DATIRS010000807         2003 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1534921, whole genome shotgun sequence.
ACCESSION   DATIRS010000807 DATIRS010000000
VERSION     DATIRS010000807.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2003
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1534921"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..472)
                     /locus_tag="VLM90_10180"
     CDS             complement(<1..472)
                     /locus_tag="VLM90_10180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13379.1"
                     /translation="MQGFSSSFLIFFYQIALGGMFAMAGTPFHEIERGFYKSTAGVLY
                     FIALLGFFGKSVFYLQAFSQPINPGLGFEIFFHSAFITAFTGYMISLWGERQVFRARS
                     FAATVLTGLAGLLCTTNSFSSAPLLSVETVIYPVAFFLSSLLLGGVTVGMLIGHW"
     gene            complement(477..1211)
                     /locus_tag="VLM90_10185"
     CDS             complement(477..1211)
                     /locus_tag="VLM90_10185"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone/menaquinone biosynthesis
                     methyltransferase"
                     /protein_id="HSQ13380.1"
                     /translation="MSVQSHPRDQAVQGMFDRIAGRYDLLNRVISFKLDNWWRKQAIE
                     ILVQGNAPLIVDLGTGTGDMVFSAMKSARGNARIVGLDFSLNMLHLAQAKRAQQPIRG
                     RTTFVQGSAMASPFKSAVFDGAMSAFVLRNVSDLGGFFTEAYRVLKPGGKLVTLDMFP
                     PQKNWFSPLYCVYFYRVMPWIGGLLAGDRGAYLYLSDSVRQFHPPEVVSDKIRRAGFA
                     QVSLRKFLNGAVCMHIAEKARGENSA"
     gene            complement(1275..>2003)
                     /locus_tag="VLM90_10190"
     CDS             complement(1275..>2003)
                     /locus_tag="VLM90_10190"
                     /inference="COORDINATES: protein motif:HMM:NF012568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HSQ13381.1"
                     /translation="TATLLHDEIIDGADTRRGKISAYKKFGFKSTLVAGDFLFIKAFE
                     FAGKFDETVVQWTADACTLLTEGEILQSHFNRNRAVTLDDYIEIVKRKTASLFHTGTK
                     VGAYLAGASQAMIDETERYGLNMGIAFQMVDDILDVVGHPDLLGKPIGMDLRDGNPAL
                     PIILALKYSDPAVCAVFDCDNPSEAQIDRAIQAIKSGPAIAEAKALAKNAAQDALKSI
                     RKLPPSQYRNGLKTLVQLIIDRDF"
BASE COUNT          462 a          531 c          596 g          414 t
ORIGIN      
        1 accagtggcc gatcagcatg cccaccgtga ctccgccgag gagcagcgac gagagaaaga
       61 atgctaccgg ataaatcacc gtctccacgg acagcagcgg cgcgctggaa aaactattgg
      121 tggtgcagag caagccggcg agaccggtga ggacggtggc ggcgaaacta cgggcgcgaa
      181 agacttgccg ttcgccccag agggaaatca tgtatccggt aaacgccgta atgaatgcgc
      241 tgtgaaagaa tatctcaaag cccaggcctg ggtttatggg ttggctgaaa gcttgcaaat
      301 aaaaaacgct cttgccgaaa aatcccaaca gggcgatgaa gtacaagacg ccggcggtgg
      361 atttgtaaaa tcctcgctcg atttcgtgaa acggtgtgcc ggccatggcg aacatgccgc
      421 ccaaggcgat ctggtagaag aaaatcaaaa agctgctgga aaaaccttgc atcttcttat
      481 gccgaatttt cgccgcgggc tttttcagcg atgtgcatgc acactgcacc gttaaggaat
      541 ttacgcaggc tgacctgggc aaagccggct cggcgaatct tatcgctaac cacttcgggc
      601 ggatgaaatt ggcgcaccga gtcggatagg tagaggtagg caccccggtc gccggcgagc
      661 aagccgccga tccacggcat cacgcgataa aaatagacgc aatagagcgg cgagaaccaa
      721 ttcttttgcg gcggaaacat atctaaagtc actaacttgc cgccgggctt gaggactcga
      781 taagcctcgg taaaaaatcc gccgagatcc gatacgttgc gcagcacgaa agcgctcatg
      841 gcgccatcga agacggcgct tttgaagggc gacgccatgg cgctgccctg cacgaacgtc
      901 gtacgtccac ggattggctg ctgcgcgcgc ttggcttgcg ccaggtgcag catgttcagg
      961 gaaaaatcga ggccgacgat gcgggcattg cctcgagcgc ttttcatggc gctaaagacc
     1021 atatctccgg tgccggtgcc gaggtcgacg atcagcggcg cgttaccttg gacaaggatt
     1081 tcaatcgctt gtttgcgcca ccagttatcg agcttgaagc tgatgacgcg attgagcaga
     1141 tcgtagcggc cggcgatccg gtcgaacatt ccctgaaccg cttggtcgcg cggatggctc
     1201 tggacggaca tgaattgaaa cgcaaatcgg cattggctcg cagcgaagtc gccggcacaa
     1261 gccgttgcgg ctttctaaaa gtctcgatcg atgatgagtt gaaccagggt tttcaaaccg
     1321 tttcggtact gcgaaggggg gagttttcga attgacttta gcgcgtcctg cgcggcattt
     1381 ttggccaagg ccttggcctc ggcaatggcg ggaccgcttt tgatcgcttg tatggctcga
     1441 tcgatttgcg cttcggacgg gttgtcgcaa tcgaacaccg cgcatacagc ggggtcgcta
     1501 tatttgagcg ccaagatgat cggcaacgcc ggattgccat cgcgcaggtc catgccgatc
     1561 ggcttgccga gaagatccgg gtggccgacc acatcgagga tgtcgtcgac catctggaag
     1621 gcgatgccca tgttcaggcc gtaccgttcg gtctcgtcga tcatggcttg gctcgccccc
     1681 gcgagatagg cgcccacttt agtgccggtg tgaaatagcg aggcggtttt gcgcttgacg
     1741 atttcgatat agtcgtcaag ggtcacggcg cgattacggt tgaaatgact ttgcagaatc
     1801 tcgccttcgg ttaacaatgt gcaggcatcg gcggtccact gcaccacggt ctcatcgaac
     1861 ttgccagcga attcaaaagc tttgatgaac aaaaagtcgc cggcgaccag cgtcgattta
     1921 aagccgaatt ttttatacgc cgaaatcttg ccgcggcggg tgtccgcgcc atcgataatc
     1981 tcgtcatgga gcaacgtcgc ggt
//
LOCUS       DATIRS010000808         2823 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1240056, whole genome shotgun sequence.
ACCESSION   DATIRS010000808 DATIRS010000000
VERSION     DATIRS010000808.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2823
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1240056"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            207..1577
                     /locus_tag="VLM90_10195"
     CDS             207..1577
                     /locus_tag="VLM90_10195"
                     /inference="COORDINATES: protein motif:HMM:TIGR00857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase family protein"
                     /protein_id="HSQ13382.1"
                     /translation="MAADLVIKGGWVVTPDATFKGGVAISNQVIVAIGDDASLPEGKE
                     VIDVKGKHILPGLFDGHVHFREPGMTHKEDFNTGSTAAVCGGITTVVDMPNTVPPTAD
                     AEQVKIKKELGEAKSLVDFGITGVVVQTNTKDILPMAAAGVIGYKIFFGETIGNLPFP
                     DDGMCVEAFDYIAQSKLPLGIHAENRQIMAYNTNKLKTEGKNEARYWEASRPDICEAE
                     SVHHAIFFAETFGTKLHVFHMSSKQAAYMVRDAKARGMRITAETGPHYLLREPNDMDN
                     VGSLLKMNPPVRTKDHAEVLWQGLREGFVDTLATDHSPHTLEEKGSDIYGKLTKPAIW
                     DCISGFCGVETGVPLILTEVNKGRLTLNQYVKVASENPAKVWQVYPKKGAIRLGSDGD
                     ITVVDMDKEGTIDVNKLHSKNKPSPWHGWKVKGMPVLTVVRGHVQMRDGEPCGKAIGK
                     ALKPII"
     gene            1680..2591
                     /locus_tag="VLM90_10200"
     CDS             1680..2591
                     /locus_tag="VLM90_10200"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HSQ13383.1"
                     /translation="MKRTEAFDFYQPATLQEASRLLKDNGPGGRFLAGGTDLVIAMKE
                     KGLLPRYIVDLKRVPGLAGIRENSDGSITLGALTTLYTIETSALIKRKYPFLAQSAAE
                     VGSIQIRNRATIGGNMANASPSADTSPALIALNATCKIASASGERTIKIDEFFKGPGQ
                     SVMNADEILTEITIPKTAANLVGEYIKFSPREMMDLAYVGVAVAYNLGASDKKCIGVR
                     IVLGAVAPTPIRAKRAEAALEGQILSAALAENAGQIAAEEAKPISDVRSSADYRRAMV
                     GTMTKRALLNAAVGPAKSWVDRRDRRY"
BASE COUNT          702 a          838 c          789 g          494 t
ORIGIN      
        1 ggactcaccg cccatcaaga acatatcgaa ctgctcgagg cgatggcgcg ccgcgacggc
       61 aaggcggccg tggccatcgt gcgcaatcac attcaggccg gcaagaaaaa tgtcattgcc
      121 gacctgcggc agcgccaagc gatccgcgag ctgcggcccg cggaattaat ctaggaccgg
      181 aaaaccaaca gaagaaaggg agaattatgg cagcagatct agttatcaaa ggcggttggg
      241 tggtgacacc cgacgcaaca tttaaaggcg gcgtggcgat cagcaaccaa gtgatcgtcg
      301 ccatcggcga cgatgcctca ctgcctgaag gcaaagaggt catcgacgtc aaaggcaaac
      361 atatcttgcc cggcctattc gacggccatg tccatttccg cgaaccgggc atgactcaca
      421 aagaggattt caacaccggc tccaccgcgg cggtctgcgg cggcatcacc accgtcgtcg
      481 atatgccgaa caccgtgccg cccactgccg acgccgaaca agtcaaaatc aagaaggaac
      541 tgggcgaagc caaatcgcta gtcgacttcg gcatcaccgg cgtcgtcgtc cagaccaaca
      601 ccaaagacat tttgcccatg gccgccgccg gcgtcatcgg ttacaagatc ttctttggcg
      661 agaccatcgg caacctgccc ttccccgatg acggcatgtg cgtcgaagcg ttcgattaca
      721 tcgcccagtc gaagttgccc ttgggcatcc acgccgagaa ccgccagatc atggcctata
      781 acaccaacaa gctgaagacc gaaggcaaaa acgaagcgcg ctactgggaa gcctcccggc
      841 cggatatctg cgaagcggaa tccgtgcatc acgcgatctt cttcgccgag acctttggca
      901 ccaagctgca tgtttttcat atgagctcga agcaagcggc ttacatggtg cgcgacgcca
      961 aggcgcgcgg catgagaatc accgcggaaa ccggaccgca ttacttgctg cgcgagccca
     1021 acgacatgga caatgtcggt tcgttattga agatgaatcc gccggtccgg actaaagatc
     1081 atgccgaagt gctctggcag gggctgcgcg aaggtttcgt cgacacactg gccaccgacc
     1141 actcgccgca tactttggag gagaagggct cggacatcta cggcaaactc accaagccgg
     1201 ctatctggga ctgcatctca ggcttttgcg gcgtcgagac cggcgtgccg ttgatcttga
     1261 ccgaagtaaa caaaggccgc ttgaccttga atcagtatgt caaagtggcc tctgagaacc
     1321 ccgccaaagt ttggcaggtc tatccgaaga aaggcgccat ccgcttgggc tccgacggcg
     1381 acatcaccgt cgtcgacatg gacaaagaag gcaccatcga cgtcaacaag ctgcatagca
     1441 agaacaaacc ttcgccttgg catggctgga aagtcaaagg catgccggtg ctcacggtcg
     1501 tgcgcggcca cgtgcaaatg agagacggcg agccttgcgg caaagcgatc ggcaaagcac
     1561 tcaagccgat catctgaaaa ctgatagaga cttcgagaca gagatagaga ccggacctca
     1621 gttagggggg cggtctctgt ctcgcgtctc tgtctcagtt ctgttaagga tcgaaatcca
     1681 tgaaacgcac cgaagcattc gatttctatc agccggcgac gctccaagaa gccagccggc
     1741 tgctcaaaga caacgggccc ggcggacgct ttctcgccgg cggcaccgat ttggttatcg
     1801 ccatgaaaga gaaagggctg ctgcccagat acatcgtcga tttgaagcgc gtgcccggcc
     1861 tcgccggcat ccgcgaaaat agcgacggca gtattaccct gggcgcgttg acgacccttt
     1921 ataccatcga gacctcggca ctgatcaagc gaaagtatcc gtttctcgcc caaagcgcgg
     1981 cggaagtggg ctcgatccaa attcgcaacc gcgccaccat cggcggcaac atggccaacg
     2041 cctcgccgtc cgccgatact tcgccggcgt tgatcgcgct taacgcgact tgcaaaattg
     2101 ccagcgccag cggcgagaga acaatcaaga tagacgaatt tttcaaaggc cccggccaga
     2161 gcgtgatgaa cgcggatgaa atcttgaccg aaatcacgat tcccaaaacc gccgccaatc
     2221 tggtcggcga gtatataaaa ttttcaccgc gcgaaatgat ggacttggcc tacgtcggcg
     2281 tcgccgtggc atacaatctc ggtgccagtg acaaaaaatg catcggtgtg cgcattgtcc
     2341 tcggcgccgt ggcaccgaca ccgatccgcg ccaagcgcgc cgaagcggcg ctcgaaggcc
     2401 agattctcag cgcagccctg gcggagaacg ccggccagat cgccgccgaa gaggccaaac
     2461 cgatcagcga tgtgcgctca tcggcggact atcgccgcgc catggtcggc acgatgacca
     2521 agagagcgct gctcaacgcc gccgttgggc cagcgaaatc ctgggtcgat cggcgcgatc
     2581 gaagatacta gaagagtggg ctgatggagt actggagtga tggagtaatg ggttaacgga
     2641 attcttaaac caacacttca atactgcatc actccgactg caattcgagg ctatcatgaa
     2701 caagaaaatt caaatcactc tcaacggcaa gttggtcagc cgcgaagtgc caacccatcg
     2761 gcttttgctc gatttgctcc gcgacgagat cggcatgacc ggcaccaaag aaggctgcgg
     2821 cac
//
LOCUS       DATIRS010000809         2232 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1337918, whole genome shotgun sequence.
ACCESSION   DATIRS010000809 DATIRS010000000
VERSION     DATIRS010000809.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2232
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1337918"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..192
                     /locus_tag="VLM90_10205"
     CDS             <1..192
                     /locus_tag="VLM90_10205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13384.1"
                     /translation="FTRGADGRRPVFGATEKFQTDPHWRDLIPFHEYFHGDNGAGIGA
                     SHQTGWTALVAKLIQQYGE"
     gene            427..1752
                     /locus_tag="VLM90_10210"
     CDS             427..1752
                     /locus_tag="VLM90_10210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13385.1"
                     /translation="MIDPERHRTLYPALCLGILTAAFIVAKTGRDALFFQGNGIFQLP
                     VATMMITAASLPLAMLFVKAMKSWGARPARVSLMIIAAGVLGMAAPFLRPGESPLLLN
                     IFVFIPGVFGIMFASLWLLASDIFETSPKPQAARAFGKIGASSLAGGMAGGFIAKWVG
                     PLVEPKWLIFIGALMILAVVALVLQTHRQFPSNLAPKKDTEKQRSFFAPLAKPYAVGL
                     LFIAMAGALAGVLIDVQFYLTATSASMGSKGNANFFANFYIMLNFTSLLLQLFAAPKI
                     QDKIGVGGGLIILPFALIGGAGFAGAAATAFSLSVLRITEGGLRSSIHRSIWEQAFIP
                     IESSERSLVKIAVDGVGARIAEGSAAVGLYFWVQWVAPGGNVTGPLDTRWMAWLTLTT
                     VVVWLFVTQRLRAQLRQKVPASVKAEAELACARFPDQCPCTTELGKGIA"
     gene            1936..>2232
                     /locus_tag="VLM90_10215"
     CDS             1936..>2232
                     /locus_tag="VLM90_10215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13386.1"
                     /translation="MASPARSIVKALLYFSAAVVCGLAGLYFWVQSDGFHQWLENEVS
                     ARTGYAVHAEKLSLSLPLRLVASGVTAAKDGNRIFTVTKLTATVTPPDFFAKTVQ"
BASE COUNT          421 a          699 c          618 g          494 t
ORIGIN      
        1 tttacccgcg gcgcagatgg ccgccggccg gtcttcggcg ccaccgagaa gttccaaacc
       61 gatccccact ggcgcgatct gatcccgttc cacgaatact tccacggcga caacggcgcc
      121 ggcatcggcg ccagccacca aaccggctgg accgcgctgg tggcgaaact gattcagcag
      181 tatggcgaat gattcgatcg gtttccagtt tcaggttcgc gttgagatca gtgcgcatcg
      241 acgactaaat caatcatccc gccttgcgtg gccaaggtgt ttcaaccgga agccataaat
      301 tcccagtgat ggcaggaact ttagcgccag aaggtcgtta tccgccatgg caggaattta
      361 caatcgtcga gaactagact gccccctcgt gatcctgact cctgacttca actcccccaa
      421 cgcaccatga ttgaccccga acgacatcgc actctctacc ccgccctctg cctcggcatc
      481 ctgactgcgg cttttatcgt cgccaagacc ggccgcgacg cgttgttctt tcagggcaac
      541 ggcatatttc aactgccggt ggcgaccatg atgatcaccg ccgcctcgtt gcccctcgct
      601 atgttattcg tcaaagcgat gaagagttgg ggcgcgcggc cggcgcgggt gagcctgatg
      661 ataatcgccg ccggtgtgct gggtatggca gcgccatttc ttcggcccgg tgaatcgccg
      721 ctgcttttga atatttttgt tttcatcccc ggcgtattcg gcatcatgtt cgcgagccta
      781 tggttgctcg ccagcgatat tttcgagacc tcgcccaagc cgcaagcggc ccgcgctttt
      841 ggcaagatcg gtgctagctc cctcgccggc gggatggcgg gcggcttcat cgccaaatgg
      901 gtcggcccgc tggtcgaacc caagtggctg atcttcatcg gcgcgctgat gatcctcgcg
      961 gtggtcgcgt tggtcctgca aacgcaccga caatttccga gcaatctcgc gccaaagaaa
     1021 gacaccgaga agcagcgtag ttttttcgcg ccgctggcga agccctacgc cgtcggcctg
     1081 cttttcatcg ccatggccgg cgccctggcc ggagtgctca tcgacgtgca attttacctc
     1141 acggccacca gcgcaagcat gggttccaaa ggcaacgcca atttcttcgc caacttctac
     1201 atcatgctca attttacttc gttgctcttg cagctcttcg ccgcgccaaa gatccaagac
     1261 aagatcggcg tcggcggcgg cttgattatc ctgccctttg ccttgatcgg cggcgccggg
     1321 tttgccggcg cagcggccac cgccttcagc ctatcggtcc tgcgcatcac cgaaggcggc
     1381 ctgcgctcgt cgattcaccg gtcgatctgg gaacaagcct ttatcccaat cgaatccagc
     1441 gagcgctcgc tggttaagat cgccgtcgat ggggtcggcg cacgcatcgc cgaaggatcc
     1501 gccgccgtcg gattatattt ttgggttcaa tgggtcgcgc ccggcggcaa cgttactggg
     1561 ccactggaca cccgttggat ggcttggctg acgttgacga cagtagttgt ctggctcttt
     1621 gtcacccagc ggctgcgcgc ccaattgcgc cagaaggtgc cggccagcgt taaggctgaa
     1681 gcggaactcg cctgcgcacg ctttcccgat caatgcccgt gtacgactga actgggtaag
     1741 ggtatcgcgt aagacattgc gtatcgcgat cgcggtcctg caagctttgc cggctctccg
     1801 gcatctaatg aatcaaccgg gcatttcgcg atcggggtct gaaccccgct cgcgaccaaa
     1861 ggggatgttc aacccccttt gtaaatccca gcaattttgt gcccgcagca agctgcgggg
     1921 aatattagat taaacatggc aagcccagcc cgcagcattg tcaaagcact tttgtatttc
     1981 tcggcggccg tcgtttgcgg cctggcgggt ctctattttt gggtgcagtc cgacggcttt
     2041 caccagtggc tcgagaacga agtttcggcg agaacaggtt acgccgttca cgccgaaaag
     2101 ctgagcttat cattaccgct ccgcctggtt gccagcggcg tcaccgccgc caaggacggt
     2161 aatagaattt ttaccgtgac caaactaacc gccacggtca cgccgccgga tttctttgcg
     2221 aaaaccgtcc ag
//
LOCUS       DATIRS010000810         1524 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1633041, whole genome shotgun sequence.
ACCESSION   DATIRS010000810 DATIRS010000000
VERSION     DATIRS010000810.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1524
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1633041"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            83..>1524
                     /locus_tag="VLM90_10220"
     CDS             83..>1524
                     /locus_tag="VLM90_10220"
                     /inference="COORDINATES: protein motif:HMM:TIGR01891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004180 - carboxypeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HSQ13387.1"
                     /translation="MTNTNEKKFVFDTVERNGEAIARLCDNIFYFAELGMQEFETSGL
                     MMELLEKAGFSIEKNLSGMPTGFVATYGSGKPVVALHTEFDATPASSQKAGVTEPTPI
                     VDGAPGHTEGHNVNGAVMIGAALAIKQAMDRFGLKGTLKVVGAPGEEQLVSRPYFVRD
                     GYFKDVDVALHDHIGTGFGTVYGLRQYALISAEFTFKGQSAHAATAPWNAKDALDAVV
                     LMDLGWDKLREHLEPTQRSHRVITNGGDQPNVIPNKAAIWWFFREATAEKTRALFEKA
                     KRIAEGAAIMTDTSYSVNVLSAVWPTRANRTLAEVIQANVEQIGMPQWAEGEQKLVCD
                     LQAKVGKKAVGMPTQIMPLKECVQSVSANDSGEVSWVVPTGLITFPSNIPGVSYHHWS
                     AGVSLATSIAHKGAIAGAKAMAASALDLFMDPKLVVKAKETFKEEIGDTEYRPLLPPD
                     QKPPLELNRDLMERYRPAMREHYLKEKPVF"
BASE COUNT          336 a          402 c          489 g          297 t
ORIGIN      
        1 tccggggaag tttgcgggat agggcgcagg ggtcgaagat tgaggatgga tgatcgagga
       61 tcgcgaagag gaaagcctag tcatgacaaa tactaacgaa aagaagtttg ttttcgatac
      121 ggtcgagcgc aacggcgaag cgatcgcgcg gttgtgcgac aatatttttt atttcgccga
      181 gctcggcatg caggagttcg agacctccgg cttgatgatg gagctgctgg agaaagcggg
      241 tttctcgatt gagaaaaatc tatccggcat gccgaccggt ttcgtcgcga cttacgggtc
      301 gggaaagccg gtggtggcgt tgcataccga gttcgacgca acgccggcgt cctcgcaaaa
      361 agccggcgtc accgagccga cgccgatcgt cgacggcgcg ccgggccata ccgaaggcca
      421 taacgtcaat ggcgcggtga tgatcggcgc ggcgttagcc atcaagcagg cgatggatcg
      481 gttcggtctc aagggcacgt tgaaagttgt cggcgcgccg ggcgaagagc aactggtgag
      541 ccggccctac ttcgtgcgcg acggttattt caaagatgtc gacgtggcgt tgcacgatca
      601 tatcggcacc ggcttcggca cggtctacgg tttgcgccag tatgcgctga tctccgccga
      661 gtttaccttc aaggggcagt cggcgcatgc ggcgaccgcg ccgtggaacg ccaaagatgc
      721 tctcgacgca gtggtgttga tggacctcgg ctgggataaa ttgcgcgagc acttggagcc
      781 gacccagcgc agccaccggg tgatcaccaa cggcggcgac caacccaacg tgattcccaa
      841 caaggcggcg atctggtggt tcttccgcga ggcgaccgcg gagaagactc gcgcgctatt
      901 cgaaaaagcc aagcgcatcg ccgagggcgc cgcgatcatg accgatacct cctattcggt
      961 gaacgtgctg agcgccgtct ggccaactcg ggccaatcgg actttggctg aagtcattca
     1021 agccaacgtc gaacagatcg gcatgccgca atgggccgaa ggcgaacaaa aattggtctg
     1081 cgacctgcag gcgaaagtcg gtaaaaaagc ggtcggcatg ccgacgcaaa tcatgccgct
     1141 caaagaatgc gtgcagtcgg tgtcggccaa tgattccggc gaagtttcct gggtggtgcc
     1201 cacaggattg attacgttcc cgtcgaatat ccccggggtt tcttaccatc actggtccgc
     1261 gggtgtttca ttggccactt cgattgcgca taaaggcgcg atcgccggcg ctaaggcgat
     1321 ggcggcgtca gcgctcgatt tgtttatgga tccaaagttg gttgtgaagg cgaaagaaac
     1381 cttcaaggaa gagatcggcg acaccgaata tcggccgctg ttgccgccgg atcagaaacc
     1441 gccgctcgaa ctgaatcgtg atttgatgga gcgctaccgg ccggcgatgc gcgagcatta
     1501 tcttaaagag aagccggtgt ttag
//
LOCUS       DATIRS010000811         2021 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_649944, whole genome shotgun sequence.
ACCESSION   DATIRS010000811 DATIRS010000000
VERSION     DATIRS010000811.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2021
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_649944"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..434)
                     /locus_tag="VLM90_10225"
     CDS             complement(<1..434)
                     /locus_tag="VLM90_10225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13388.1"
                     /translation="MNLNSLRLFLSVIGLCLVWAAQSFGAEKPFYEGKTLTVLINYAA
                     GGPTDVEGRLLARHLGRHIPGLPNIVVQNMAGAGGVIGTNFLGQVAKADGSMMGYFTG
                     ALFHQQVKNPALRTDLSKYAFISGIQGVTVSYIRSDVAPGIK"
     gene            complement(555..1613)
                     /locus_tag="VLM90_10230"
     CDS             complement(555..1613)
                     /locus_tag="VLM90_10230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13389.1"
                     /translation="MNKRRSWLTVLGVLGLIGLSPSLNYGQAPFFQGKTIKIINNDPG
                     GTAGLRVKVVMTHLRKYIPGNPTLVIEFVEGGGGRRAANQVFQNAKPDGLTIGALSSS
                     IIGLQVMKETGVMYDIDKFIYLGTPVSENHNVIYTRRELGLNSLDKLRAASGLRLGAQ
                     EVGAVAYISARLFAYFLDLKAPKFVTGYTSLEADVALRNGEIDSRSNNVTSVLSRNRD
                     WIDKGIMDFHAVLAVPKDDKPSHPRLAQLPEIESFAKTDRERKLLTMWRSFRTATTPF
                     VMPPGTPKDRVEILQEGMRKVFADPEFRAEFKKLANDDASPLMPEELAKVIHDMPRDA
                     EIVELLRKFTGVDPLPAR"
     gene            complement(1686..>2021)
                     /locus_tag="VLM90_10235"
     CDS             complement(1686..>2021)
                     /locus_tag="VLM90_10235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13390.1"
                     /translation="RDARLPNTPTIFEIMEKDTTPDSGRRLATVLLGADDMGRPMFGP
                     PNMPADRLKTLRDGFAKTMTDEQFRADVKKRGYEFDPVGGDELERLAKEIIGQPPEII
                     DRLKKVLGN"
BASE COUNT          408 a          597 c          570 g          446 t
ORIGIN      
        1 ttcttgatgc cgggggcgac atcggaacga atataagaca cggtgacgcc ctggattccc
       61 gagatgaaag cgtatttaga aaggtccgtg cgcagcgccg gatttttcac ctgctgatga
      121 aacagcgcgc cggtgaagta acccatcatc gatccatcgg ctttggccac ttgccccaag
      181 aagttggtgc cgatgacgcc gcccgccccg gccatgtttt gtaccacaat attcggcagt
      241 cccggaatgt gccggccaag atgacgcgcc aagagccggc cttcgacgtc ggtaggcccg
      301 ccggcggcat aattgatcaa tacggtgagc gtcttcccct catagaaggg tttctcggca
      361 ccgaagcttt gcgccgccca gactaggcac aggccgatga cggacagaaa gagtcgcaat
      421 gaatttagat tcattttcca ctcctgatta atctcggcgt ctctaactct cggcagtata
      481 tcgcgctacc ttgatcttcc ttccaaacac cgccgcaagc ggcaatccga acgaaaaacg
      541 gccggtgccg acgctcaccg cgccggcaac ggatcgacgc cggtaaattt tctcaacaac
      601 tcgacaatct cggcatcccg cggcatgtcg tgaatgactt tggctaactc ttcgggcatc
      661 aacggcgagg catcgtcgtt ggcgagtttc ttgaattcgg cacgaaactc ggggtctgca
      721 aataccttgc gcatgccctc ttgcaagatc tcgacacgat ctttcggcgt ccccggcggc
      781 attacaaacg gcgttgtcgc ggttcggaaa ctgcgccaca tcgtcagcag ctttctctct
      841 ctgtcggtct tagcaaagct ctcgatctcc ggcagttgcg ccaaacgtgg gtgcgatggt
      901 ttgtcgtctt tgggcaccgc caggaccgca tgaaagtcca tgatgccctt gtcgatccag
      961 tcgcgattgc ggctcaggac agaagtgacg ttgttggagc gcgaatcgat ctcgccgttg
     1021 cgcagggcca cgtcggcttc cagcgacgtg tagccggtga cgaacttggg cgctttgaga
     1081 tcgagaaagt aggcgaacaa gcgcgccgag atatacgcca ccgcccccac ctcttgggcg
     1141 ccgaggcgca ggccgctcgc cgcgcgcagc ttgtcgaggg aattgagacc cagttcgcgc
     1201 cgcgtgtaga tgacgttgtg gttctcgctc accggcgtgc cgagataaat gaacttgtcg
     1261 atgtcataca tgacgccggt ctctttcatc acctgcagac cgatgatcga gctgctgagc
     1321 gcgccgatgg taaggccgtc gggcttggcg ttttgaaaaa cctgattggc cgcccggcgc
     1381 ccgccgccgc cttcgacaaa ctcgatcacc agcgtcgggt taccaggaat gtacttacgc
     1441 aggtgcgtca tcacgacctt gacccgcaac cccgccgtgc cgccgggatc gttgttgatg
     1501 atcttgatgg tcttgccttg aaaaaacggc gcttgaccgt aatttaggct gggagacaaa
     1561 ccgataagac cgagaacacc gagaacagtt aaccacgatc gccgtttgtt catgttaagc
     1621 ctcctgtact agctaccgag ggcttttacg ctatttatcg atttggtcaa gggctattgt
     1681 cgcgctcagt tacccaacac tttcttcaac cggtcgataa tctcgggcgg ttggccgatg
     1741 atttctttgg ccagccgctc cagttcgtcg ccgcccaccg gatcgaattc gtagccgcgc
     1801 ttcttcacat cggcgcggaa ctgttcgtcg gtcatggtct tggcgaagcc atcgcgaagc
     1861 gtcttcaaac gatccgccgg catattcggc gggccgaaca tgggccggcc catgtcgtcg
     1921 gcgccgagta agacggtcgc aagccggcgg cccgagtccg gggttgtgtc tttttccatg
     1981 atttcaaaaa tcgtcggtgt attgggcagg cgggcatcgc g
//
LOCUS       DATIRS010000812         2052 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_550822, whole genome shotgun sequence.
ACCESSION   DATIRS010000812 DATIRS010000000
VERSION     DATIRS010000812.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2052
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_550822"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..438
                     /locus_tag="VLM90_10240"
     CDS             <1..438
                     /locus_tag="VLM90_10240"
                     /inference="COORDINATES: protein motif:HMM:NF026183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-binding protein"
                     /protein_id="HSQ13391.1"
                     /translation="VVYTGELGTGTVIKLAHNLVRRGIGLAIGEGLVLGAKAGVDPEL
                     LWDCMHWGLDVQLNQLKKHFSETVFTGNYEPPASFGIGLSRKDVGLATELGRQHNVPM
                     PLAALVEQMMIHAISRGWSEQSTASLFRLQEEAAGVQVRKRRK"
     gene            complement(456..752)
                     /locus_tag="VLM90_10245"
     CDS             complement(456..752)
                     /locus_tag="VLM90_10245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13392.1"
                     /translation="MAFTTTRSTNRIAKRQESAQAMMQKSKPKSHAHASEQFCKYENN
                     SSKKGHCSAPAIALINQRNPAPGDLAISASLITIAATLAGNRLSALREKRAGSV"
     gene            765..1226
                     /locus_tag="VLM90_10250"
     CDS             765..1226
                     /locus_tag="VLM90_10250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13393.1"
                     /translation="MSKVKILFPTVMLFSALTLAATAAVAQSELAAAKVSFETTSIAA
                     GIGFSWGNGKLRFNGKDYDFSINGVTFIDVGISKASAAGDVYNLAELAKFEGQYVAAE
                     ASVALGGGVGGMSLRNSNGVVMHLSSVSQGARMQLGSSGMSIKLWLPPRKD"
     gene            complement(1359..>2052)
                     /locus_tag="VLM90_10255"
     CDS             complement(1359..>2052)
                     /locus_tag="VLM90_10255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13394.1"
                     /translation="PRYPHMEVDGILEVLSTEIWPCNFFQRIDNNGDTYHVPFVHRGA
                     YSASSANYRAGLPEISKEESPWGTTAYASFAQGWRNVFQFFMPNAYAFRNPSPEPECG
                     AEDRMQWDVPLNDEQSLEFRLRRLPLTGKAAEDYRARRAAEAAAPQISVAQMGAAVLA
                     GKLNFQDLDKFFQDKIALVHSQDYVAQVGQGPVADRAQEHLGRSDTGIILFRKIWERE
                     LRALAEGRPLKK"
BASE COUNT          408 a          566 c          622 g          456 t
ORIGIN      
        1 gtggtttaca ctggcgaatt gggaaccggc acggttatta aactagcgca taacctggtg
       61 cgccgcggca tcggcctggc gatcggcgaa ggcctcgtgt tgggagccaa ggccggcgtg
      121 gacccggagc ttctctggga ctgcatgcac tggggcctgg atgtccagct caatcagctg
      181 aaaaaacatt tctccgaaac cgtgttcacg ggaaactacg aaccgccggc gagtttcggc
      241 attggactgt cgcgaaagga cgtcggcctt gccaccgaat tgggccgcca gcacaacgtg
      301 ccgatgcccc tcgctgccct agtcgagcag atgatgatcc acgccatcag ccgtggctgg
      361 tcggagcaaa gcacggcgtc gctgtttcgc cttcaggaag aagccgccgg agttcaggta
      421 cgcaagcgtc ggaagtaaca ttacggcgat cgccattaca ccgatccagc gcgtttttcg
      481 cgcaaagcag ataagcgatt tcctgccaaa gtcgcggcaa tcgtgatcag cgacgcgctt
      541 atggccaaat cgcccggtgc cggattcctt tgattaatca gggcgatcgc aggcgcactg
      601 caatgacctt ttttggagct attgttctca tacttgcaga attgttcgct ggcatgcgca
      661 tggctctttg gttttgactt ctgcatcatc gcctgcgcgg attcctgtcg cttggcgatg
      721 cggtttgtgc ttcgagtggt tgtgaaagcc aaggcggagg tcatatgtcc aaggtcaaaa
      781 ttctttttcc cactgtcatg ctgtttagtg cgctgacact agcggcaacc gcggccgttg
      841 cccaaagcga gctggcggcg gcaaaggtat ccttcgaaac cacttcgatc gccgccggta
      901 tcggttttag ctggggcaac ggcaagctca ggttcaatgg gaaagactat gatttttcga
      961 tcaatggcgt tacgtttatc gatgtcggca ttagcaaggc aagcgccgcc ggtgatgttt
     1021 ataatctcgc tgagctagcc aagtttgagg gacaatacgt tgccgccgaa gctagcgttg
     1081 ctttgggcgg aggcgtggga gggatgtctc tgcgcaactc gaacggcgtc gtcatgcacc
     1141 tcagttcagt gtcccagggc gcgcgcatgc aacttggctc cagcggcatg agtatcaagc
     1201 tctggctgcc tcccaggaaa gattgaagaa atctccgcgt cgcaaccgac ccgcaagcta
     1261 aagaaaacct gctagccatt cctagcctat cctggcgcgc tgtgaagcaa ttttgtcgag
     1321 tcctgctgga atgcgatctc ggcgtcttgg ggcaagcatc attttttcag cggccgtcct
     1381 tcggctaagg cgcgcagttc cctctcccag atcttgcgaa ataaaataat gccggtgtcg
     1441 gagcggccga gatgttcctg ggcgcgatcg gccaccgggc cttggccgac ttgcgcgacg
     1501 tagtcttggc tatgcaccaa agcgattttg tcttggaaaa atttgtccaa gtcttggaag
     1561 ttgagttttc ccgccagcac cgccgcgccc atctgcgcaa cggagatttg tggcgccgcg
     1621 gcctcggcgg cgcggcgcgc gcggtagtct tcggcggctt taccggtgag cggcaaacgg
     1681 cgcaggcgga attccaaaga ctgctcgtcg ttgagcggca cgtcccactg catgcggtct
     1741 tccgcgccgc attccggttc cggcgaggga ttgcggaaag cgtaggcgtt gggcatgaaa
     1801 aactgaaata cgttgcgcca gccctgggcg aagctcgcgt aagccgtcgt gccccaaggg
     1861 ctttcttctt tggagatctc cggcagcccg gcgcgataat ttgccgaaga ggccgagtag
     1921 gcgccgcgat ggacgaaggg cacgtggtag gtgtcgccgt tgttgtcgat gcgctggaaa
     1981 aaattgcacg gccagatttc cgtcgacagc acttcgagaa tgccgtccac ttccatatgc
     2041 ggatagcgcg gg
//
LOCUS       DATIRS010000813         3879 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_944786, whole genome shotgun sequence.
ACCESSION   DATIRS010000813 DATIRS010000000
VERSION     DATIRS010000813.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3879)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3879)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3879
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_944786"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..224)
                     /locus_tag="VLM90_10260"
     CDS             complement(<1..224)
                     /locus_tag="VLM90_10260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13395.1"
                     /translation="MIRDNSGMRVNDRRTLILVWVLGVCLSASLVSHTGAQTPRHIKV
                     VLHSQQTESLNRDGVQGSGSVVIRRGTVSPS"
     gene            complement(221..1315)
                     /locus_tag="VLM90_10265"
     CDS             complement(221..1315)
                     /locus_tag="VLM90_10265"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13396.1"
                     /translation="MEPLNFQHKVCARRRSRSPRRPLFHNLALQFLTLSRLGRGTGEG
                     KKTGAGKKASLQTCLLFATVLLIAAVAQGAESPYKIRIGFPSLAFSYMPYYVAQEKGF
                     FKKYNIESEYIQITNSIAPQAVVAGNINYFTSAATAISAGIAGLPLVMVINFCDVSPW
                     VLVTHKDINKPQDLIGKTVALSGVRTSPYYYFQAFVKKSELNEKDVGTINTGGTADSF
                     RALISNRVAATVLTPPFDDKAVSLGYKKFAQLGELAEIPYVGMVTSLNEIKTNRESVR
                     RTVAAVMESVGWLRTNRSESVKMIVDKFKVNQQEAEGTYATLIRILNKDGRMNPKVAR
                     GYLDILRQERPIAADYDPMKHADFSLLPRS"
     gene            complement(1327..2529)
                     /locus_tag="VLM90_10270"
     CDS             complement(1327..2529)
                     /locus_tag="VLM90_10270"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13397.1"
                     /translation="MDNFDNVLVVDADGHVYEGNIDLRPRMPEKWRSQAPINLKDNEG
                     NGRMLLEGRMWSASQGLGPGVSGPMTDKARGFREGMIDPLARLKDMDAEGIDAAILFG
                     TQIALTVNGLMSKELSAVLCHACNDWLMEYCSAEPKRLLGVGLIPCQDPQAAVKELEY
                     LKKAGAVTAMLPTNVYGLNNMGDKMFDPIYECAQAIGMMLSVHPQTGHDGVPGVSGVM
                     GAGSERFRKYVYVHMTAFPFELMIAMMHMIGEGVFDRFPKLKVGFMEGGAGWLPFWAE
                     RFDEHIEKLAPQMPELKRRPSEIIKSKQIVLTCESEETGLDRVFAANGEDTVLYASDY
                     CHWDCHFPYSVKDVVDSQDLSFAQKEKLLGKNAVDFFELKNLPKPNALKIAHASWVNG
                     DQPKAAMA"
     gene            2885..>3879
                     /gene="cofG"
                     /locus_tag="VLM90_10275"
     CDS             2885..>3879
                     /gene="cofG"
                     /locus_tag="VLM90_10275"
                     /EC_number="4.3.1.32"
                     /inference="COORDINATES: protein motif:HMM:NF004884.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7,8-didemethyl-8-hydroxy-5-deazariboflavin
                     synthase CofG"
                     /protein_id="HSQ13398.1"
                     /translation="MQALLATAAELRNRYKGRTVTYSPKIFVPLTNLCRDFCGYCTFR
                     KAPDEPGAKTMRLDEVLRSVRQGKALGCTEVLFSLGDKPEAIYPEMKQFLTERGHQRT
                     LDYLVEACRVVLEETGLLPHSNPGVMGRGDLQRLKEFNPSMGLMLESISERLLLAGAA
                     HDNAPDKKPAVRLRTLELAGELRIPFTTGILIGIGENWQERIDSLLAIRELHERYGHI
                     QEVIVQNFRAKSRTPMRGHPDATQNDMVKTIALARLIIGGGMNIQAPPNLTPDGYELY
                     LDAGINDWGGVSPLTPDFINPEAPWPALRLLQEKSAQAGFELKARLPIYPEYIRQG"
BASE COUNT          785 a         1063 c         1157 g          874 t
ORIGIN      
        1 gacggactga cagtgccgcg gcggatgacc acgctgccgc tgccttgaac accgtcgcgg
       61 ttcaagcttt cggtctgctg tgagtgcagt acgaccttga tatgccgagg tgtttgcgcg
      121 ccggtgtggg agacgagact cgcactcagg caaacgccaa gtacccagac gaggattaag
      181 gttcttctat cgttcacccg catgccgcta ttgtcgcgta tcaactacgc ggcagcaagg
      241 agaaatcggc atgcttcatc ggatcgtagt cggcggcgat ggggcgctct tggcgcaata
      301 tgtcgagata gccgcgggcg actttgggat tcatgcggcc gtccttgttc aaaattctaa
      361 tcaacgtcgc gtaggtgcct tcggcttcct gctggttcac tttgaactta tcgacgatca
      421 tcttgacgct ctcactgcga ttggtgcgca gccagccgac cgattccatg accgcagcca
      481 ccgtgcggcg gacggattcg cgattggtct tgatttcgtt tagcgaagtg accatgccga
      541 cgtagggtat ttccgcgagt tcgcccagtt gggcaaattt cttgtagccc agcgacactg
      601 ccttgtcatc gaagggcggg gtcaataccg tggcggcgac gcgattgcta atcagcgcac
      661 gaaaactatc cgcggtgccg ccggtgttga tggtgccgac atccttttcg ttgagttcgg
      721 attttttcac gaacgcttga aaataataat agggtgaagt gcgcacgccc gagagcgcga
      781 cggttttgcc gattagatcc tgcggcttgt tgatgtcttt atgggttacc agtacccacg
      841 gcgaaacgtc gcaaaagttg atgaccatga ccagcggcag gccggcgatg ccggcggaaa
      901 tcgccgtcgc cgcggaggtg aagtaattga tattgccggc gaccacggct tgcggcgcga
      961 tcgaattggt tatttgaatg tactccgatt cgatgttgta ttttttgaag aaacccttct
     1021 cctgggcgac gtagtaaggc atgtaagaaa acgccaggga gggaaagccg atgcggattt
     1081 tatatgggct ctccgctccc tgggctactg ctgcaatgag caggacagtg gcgaagagga
     1141 ggcatgtttg aagtgaggct ttctttcccg caccggtttt cttgccctca cccgtccctc
     1201 tcccaaggcg agagagggta agaaattgca gggcgaggtt atgaaagagc gggcgacgag
     1261 gcgaacgtga acgtcggcgc gcgcacactt tgtgttgaaa atttaagggt tccatgccgg
     1321 ctctccttat gccatggcgg ctttaggttg atcgccgttt acccagctgg cgtgagcgat
     1381 cttgagcgca ttgggcttcg gcagattttt cagctcgaag aagtcaacgg cgttcttgcc
     1441 gagcagtttt tctttctggg cgaagctcag gtcttggctg tcgaccacgt ctttcaccga
     1501 ataggggaag tggcaatccc aatggcagta atccgaagcg tagagcaccg tgtcctcgcc
     1561 gttggcggcg aatacccggt cgagaccggt ttcttcggat tcgcaggtga ggacgatttg
     1621 tttgcttttg atgatctcgc tcggccgccg ttttagctcg ggcatttgcg gcgcgagctt
     1681 ttcgatatgt tcatcgaagc gctctgccca gaacggcagc catccggcac cgccctccat
     1741 gaagccgacc ttgagtttcg ggaaccgatc gaacacgcct tcgccgatca tgtgcatcat
     1801 ggcgatcatc agttcaaagg gaaacgcggt catatggacg tagacgtatt ttcgaaagcg
     1861 ctcgctgccg gcgcccatga cgccggaaac gccgggcaca ccgtcgtggc cggtttgcgg
     1921 atggacgctc agcatcatgc cgatggcttg agcgcattca tagatcgggt cgaacatctt
     1981 gtcgcccatg ttgttcaagc cgtagacgtt ggtcggcagc attgccgtga ccgcgccggc
     2041 ttttttcaaa tattccaatt ccttcaccgc ggcttggggg tcttggcaag gaatcaggcc
     2101 gacgccgagc aatcttttcg gctccgccga gcagtattcc atcaaccaat cgttgcaggc
     2161 gtggcagagc acggcggaca gttctttgct catcaagccg ttgaccgtga gggcgatctg
     2221 ggtgccgaat aaaatcgcgg cgtcgatgcc ttcggcgtcc atgtctttga gccttgccag
     2281 cggatcgatc atgccttcgc gaaagccgcg cgccttgtcg gtcatcggac cggagacgcc
     2341 ggggccgaga ccttgagagg cggaccacat gcggccttcg agcaacatgc gcccgttgcc
     2401 ttcgttgtct tttaggttaa tcggcgcctg ggagcgccac ttttccggca tgcgcggccg
     2461 caagtcgata tttccttcat aaacatggcc gtcggcgtcg acgaccagaa cgttatcgaa
     2521 gttgtccatg gtagttcctc cccgagtttc tcgacaccac gagacctacc acagcgaaag
     2581 tctcaagggc aaccggaatt ggccggttcg gtgcgccgcg gggtagtgat tcaatttgga
     2641 ttttaccact tgccatccta ggtcccgacc tgtgtgtctg ccctctcgga cgggcgacca
     2701 ccaagggtcg ccccgacaaa ttttatgaaa ccgagccact acccgccgca gcgctggttt
     2761 gaataccggc ggtcaattgg atattcaaac acaacagatg cacgcgatac tccaagactg
     2821 ccgacagggg aaactcttat cccgtggttc ggcgctatcc ttggttgacg ccgagggaga
     2881 tgacttgcag gcgctgctgg cgaccgcggc cgagctgcgg aaccggtata aggggcgcac
     2941 cgtaacttat tcgccgaaga tttttgtccc gttgactaac ctatgccggg atttttgcgg
     3001 ctattgcacc tttcgcaaag cgcccgatga gccgggcgcg aaaaccatga ggttagatga
     3061 ggtgttgcgc tcggtgcgcc agggtaaagc gctgggttgc acggaagtgt tgttcagcct
     3121 cggcgacaag cccgaggcga tttacccgga gatgaaacaa ttcttgaccg agcgcggcca
     3181 tcagcgaacc ctcgattatc tcgtcgaggc ttgccgcgtt gtgctggaag agaccggact
     3241 tttaccgcat tcgaatccag gcgtcatggg acgcggcgat ttacaacggc tgaaggaatt
     3301 caacccgagc atgggcctga tgctcgaaag tatcagcgag cggttgctgc tggccggcgc
     3361 cgctcacgat aatgccccgg ataaaaagcc ggcggtgcgg ctgcgcacct tggaattagc
     3421 cggtgagttg cggattcctt ttaccacagg aatccttatc ggtattggcg agaactggca
     3481 ggagagaatt gactcgctgt tggcaattcg cgagctgcat gagcgctatg gtcacatcca
     3541 agaagtgatc gtgcagaact ttcgcgcgaa atcgaggact ccgatgcgcg gccatcccga
     3601 cgcgactcag aatgacatgg tcaagaccat cgcgctggcg cgcttgatca tcggcggtgg
     3661 gatgaatatc caagcgccgc ccaatctgac gccggacggc tatgagcttt atctcgacgc
     3721 cggcatcaac gactggggcg gcgtgtcgcc gctgacgccg gacttcatca atcccgaggc
     3781 gccctggccg gcactgcgct tgctccagga aaaaagcgct caggcgggat tcgaactgaa
     3841 agcccggctg ccgatttatc ccgagtatat tcgccaggg
//
LOCUS       DATIRS010000814         1577 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1926979, whole genome shotgun sequence.
ACCESSION   DATIRS010000814 DATIRS010000000
VERSION     DATIRS010000814.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1577)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1577)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1577
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1926979"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..782
                     /locus_tag="VLM90_10280"
     CDS             <1..782
                     /locus_tag="VLM90_10280"
                     /inference="COORDINATES: protein motif:HMM:NF013499.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HSQ13399.1"
                     /translation="AHQRDQASNQINIFGMLGAPSKSAKKAGEAYPSVNEWSQQEALA
                     FEKEALGFYITGHPLDKYDRVLKKISSGTIAALKEKALSGEVRIGGVVSALRLRNTKK
                     GDRYGSFNLEDKTGFIEVITWPETYKKCADLIGADDPIYVKGKMEVGEERIQVIANEV
                     TGLADAAKNPKNAVPNGTGERIDLYVREDEVSPDELVRLRDTLLDYPGRHTVFLHLRA
                     PADGETVIELPDQVRIAPSPELEDIVGRLFGPRVSFNSLNS"
     gene            824..>1577
                     /gene="hflX"
                     /locus_tag="VLM90_10285"
     CDS             824..>1577
                     /gene="hflX"
                     /locus_tag="VLM90_10285"
                     /inference="COORDINATES: protein motif:HMM:TIGR03156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HSQ13400.1"
                     /translation="MIGVDLPSREHKVPLSYSLEELERLAKTAGANVVKKYSQQVKNV
                     TPATLMGRGKVEEIQASLQELRADLVIVDEDLTPAQQRNLETAFKVRVIDRSQLILDI
                     FAQRARSNEGKLQVELAQLEYLLPRLTRQWTHLSRLGGGIGTRGPGETQLEIDRRRIR
                     ERIGHLKRRLKTVERTRTLQRKERDEVPFATVALVGYTNAGKSTLMNTLTRAGVFVED
                     KLFATLDPTTRALRLPNGDKVMLVDTVGFINKI"
BASE COUNT          365 a          462 c          475 g          275 t
ORIGIN      
        1 aggcgcacca gcgcgatcag gcgagcaacc aaatcaacat ctttggcatg ctcggcgcgc
       61 caagcaaaag cgcaaagaaa gccggcgaag cttatccttc ggtcaatgaa tggtcgcagc
      121 aggaggcgct ggcctttgaa aaggaggccc tcggtttcta tatcaccggc catccgctcg
      181 acaagtacga ccgcgtgctc aagaagatca gcagcggcac gatcgccgcg ctcaaagaaa
      241 aggcgctatc gggagaggtg aggatcggcg gcgtggtttc ggcattgcgc ctgcgcaaca
      301 ccaaaaaagg cgaccgttac ggcagtttca atctcgaaga caagaccggc ttcatcgaag
      361 tcatcacctg gccggagact tacaagaagt gcgccgactt gattggcgcc gatgatccga
      421 tttacgttaa aggtaaaatg gaagtgggcg aagagcgaat tcaagtgatc gccaatgaag
      481 tgacggggtt agccgacgcg gcgaaaaatc ccaagaacgc cgttcctaac ggcaccggtg
      541 aaaggatcga cctttacgtg cgcgaggacg aagtgtcgcc tgatgaactg gtccgactgc
      601 gcgacacctt gctcgactat ccagggcggc acacggtctt tctccacttg cgtgcgccgg
      661 ccgacggcga aaccgtcatc gagctcccgg accaagtgcg catcgcgcca tcgccggagc
      721 tcgaagatat cgtcggccgg ctgtttgggc cgcgcgtgag ctttaattcc ttgaactctt
      781 gaagccgctc atttccacgc aacatccccg ggaaagggcc gttttgatcg gcgtcgactt
      841 gccgtcccgc gagcacaaag taccgctctc ctacagtttg gaagagctcg aacggttggc
      901 aaagaccgcc ggcgccaacg tagtcaagaa gtacagccag caagtcaaaa acgtcacgcc
      961 ggcgaccttg atggggcgcg gcaaggtcga agagattcaa gcgagcttgc aagagttgcg
     1021 ggcggatctt gtcatcgtcg acgaagattt aacgccggcg cagcaacgca acctggaaac
     1081 ggctttcaaa gtccgggtga tcgaccgcag ccaattgatt ctcgatatct tcgcgcagcg
     1141 ggcgcgcagt aacgaaggca agctgcaagt cgaattggcg cagctcgaat atctgctgcc
     1201 gcggctgacg cggcagtgga cccacctgtc acgcctcggc ggcggcatcg gcactcgagg
     1261 gccgggcgaa actcagttgg aaatcgaccg gcggcgcatc cgcgagcgca tcggtcatct
     1321 gaagcggcgg ctcaaaaccg tcgagcgcac gcgcacgctg cagcgtaagg agcgcgacga
     1381 ggtgccgttc gcgacggtgg ctctggtcgg ctataccaac gccggcaagt cgaccctgat
     1441 gaacaccttg acacgggccg gtgtgttcgt cgaggacaag ctttttgcca ccctcgatcc
     1501 gaccacgcgc gctttgcgtt tgccgaacgg cgacaaggtc atgctcgtcg acaccgtcgg
     1561 cttcatcaac aagatcc
//
LOCUS       DATIRS010000815         1533 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_453856, whole genome shotgun sequence.
ACCESSION   DATIRS010000815 DATIRS010000000
VERSION     DATIRS010000815.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1533
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_453856"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..236
                     /locus_tag="VLM90_10290"
     CDS             <1..236
                     /locus_tag="VLM90_10290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13401.1"
                     /translation="FFDGRPLQVLPPHPKGFGVGMPDGLVSYGGFYFLASRRGELLIV
                     QGQRAIAFDVSLETEDLNPAVFDRSLTRAVPRR"
     gene            358..1386
                     /locus_tag="VLM90_10295"
     CDS             358..1386
                     /locus_tag="VLM90_10295"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ13402.1"
                     /translation="MWLNLLVVIGSLVSSTAIYAQAPFYQGKTVTIVVATKAGDVYDL
                     YPRLLAEYLPKYIPGNPNIIIQNVAGAAGLIATNQVYNLAKPDGLTLGAIYPALYFEQ
                     LAKRPEVKFDWSRFLWIGSMASSNTLMYIRNDDGIKTIEDVRGAAAPPKCGATGVTSA
                     AFYMPKLIEDAIGAKFNIVSGYVAGSDIDLAVERGEVQCRAFTISTYFAREPFITWRK
                     KNFVRVLYQTGTKRDGRLKEVPTFNELMDKHKTAAGVRQFVKVVVASDEFGRPLVAPP
                     GVAPERIKILREAFNMAVNDPALLAEAEKRRLDMDPASGEELDALAKEVMATPPAIVE
                     KVKLLIGN"
BASE COUNT          319 a          415 c          460 g          339 t
ORIGIN      
        1 cattcttcga cggccggccg ttgcaagtcc tgccgcccca tcccaaaggt ttcggcgtgg
       61 gcatgccgga tggattggtt tcctacggcg gcttctattt tctcgccagt cgacgcggcg
      121 aattgttgat tgttcaggga cagcgggcga tcgccttcga tgtgagcttg gaaacggaag
      181 accttaaccc ggctgttttc gatcgctcgt tgactcgcgc ggtgccgcga cgatgataat
      241 cttttcaaaa ttgacgcgcc gatcgcggcg aagctgaggc agatactttt gcccaaagtg
      301 taagccgcgc tcgaagctag gttttaaaaa ttttgtggaa tgaaaggaca agcaaccatg
      361 tggctcaatc tgttggtcgt tatcggttcc ctcgtgagca gtacggcgat ctatgctcag
      421 gcgccgtttt accagggtaa gactgtaacg atcgtcgtgg cgaccaaagc cggcgatgtt
      481 tacgatctct atccccggct gctggcggaa tacttgccga aatatatacc tggcaatcct
      541 aacattatta tccagaacgt cgccggagcg gcggggctga ttgcgaccaa tcaggtctac
      601 aatctcgcca agccggacgg tctgacgctc ggcgcgatct acccggcgct ttacttcgaa
      661 cagctcgcca agcggccaga ggtcaagttc gactggagcc ggtttctctg gatcggcagc
      721 atggcttctt cgaatacatt gatgtacatc cgcaacgacg acggcatcaa gaccatcgaa
      781 gatgtgcgcg gcgcggctgc gccgccgaag tgcggcgcca ccggtgtcac ctctgcggca
      841 ttctacatgc ccaagctcat cgaggacgcc atcggcgcta aattcaatat cgtttcaggc
      901 tacgttgccg gctcggacat cgatttggca gtcgaacgag gcgaggtgca gtgccgggcg
      961 tttactatct ccacctactt tgcccgtgag ccgtttatca cctggcgcaa gaagaacttt
     1021 gtgcgcgtgc tgtatcaaac cggcaccaag cgcgacgggc ggctgaaaga ggtgccgact
     1081 ttcaatgaac tgatggacaa gcacaagacc gctgcggggg tgcggcaatt tgtcaaggtc
     1141 gtggttgctt ccgatgagtt tggccgtccc ctggtggcgc cgcccggtgt ggcgccggag
     1201 aggatcaaaa tcttgcgcga agcgttcaac atggcagtca acgatccggc gctgctggct
     1261 gaagcggaga aacgccgtct cgacatggat ccggccagcg gcgaagagtt ggacgcgctc
     1321 gccaaagaag tgatggctac gccgcccgcg attgtggaaa aagtaaagct cttgatcggc
     1381 aactgatgtt tggcggagga ctcgatatga aaatggcaaa gattgtcgca tcggttgtcg
     1441 cgctgctgtt ggcattgagc tggctggcca ctctcgccca ggcagcggca aaattcgtgg
     1501 tcggttatgc cgcgatgaac tcgcgtatgg cgc
//
LOCUS       DATIRS010000816         5000 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_355066, whole genome shotgun sequence.
ACCESSION   DATIRS010000816 DATIRS010000000
VERSION     DATIRS010000816.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 5000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5000
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_355066"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(79..1428)
                     /locus_tag="VLM90_10300"
     CDS             complement(79..1428)
                     /locus_tag="VLM90_10300"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HSQ13403.1"
                     /translation="MGNLIITNALIIAMTERASFNGFVRVRDSAIAEVGAGAPPETAK
                     NEEMLDGSGCVLMPGLVNAHTHLYQVLLRAVWEDLELMPWLKRIYGCARVLTPAHFYA
                     GSLLGCLESIRGGVTTVCEHNFLNPSPECALETIRAMRDAGLRSVFARTIMDTGEIVP
                     ECTKEKPEQAFRLIEALLARHKNSQQLTFMTGPNTPPINTTPDLLREVRRFADANSLG
                     ISAHVAESHSVVEAVRRQHGKSGVVEFLHQFGIPAKNSIFAHSVHVSQDEIGILKETG
                     SSVSHNPVSNMMLGDGVAPVVEMLRQGVNVALGTDGAASNHSQDLFDTMKAASLLQKV
                     QHQDAGVIKPYDVLCMATIGGARALGLNSLCGTIEVGKRADLILVDIDTAHNQPINDI
                     FSQIVHCAKASDVRTVMIDGAIVMRDRQLAGLDDKQILADAKLANRDLLERVSGLAF"
     gene            complement(1444..2427)
                     /locus_tag="VLM90_10305"
     CDS             complement(1444..2427)
                     /locus_tag="VLM90_10305"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13404.1"
                     /translation="MRRCKSSMLATCLFWLWPALAAAQSVPLLNMGYSGAGIGSDLLK
                     VIERAGLWRRHGIDVRTIYLSSGSLMAQTMSSGDIGVAGFDTPAMLNLAVAGSNLKVV
                     AVPINRIEPMFVVRSNIKVPGDLKGKRVTISRFGSGSDIMTRVALRHWKLDPEKDVSF
                     LQTGNTPTRIAALVAGQVDAALVSSTGVAKIIATGCCRVLADLAELPLEFANYGVVVS
                     GSLLKNQRDPIKRFLMALIEGIHVFKTRPEIARGVLRESNSDAEAIGPLYERLSKSFR
                     DFPAPEPRGIQNVLDSLMVPKAKGARAEDFMDTTLMDEIRKSGFFERLTGK"
     gene            2570..2977
                     /locus_tag="VLM90_10310"
     CDS             2570..2977
                     /locus_tag="VLM90_10310"
                     /inference="COORDINATES: protein motif:HMM:NF012417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSQ13405.1"
                     /translation="MAQETKEFRHKTPEFEGPKKTWQVCNSDLMKVQVQVVKDGGENN
                     LHTHTGEDAFWYVVSGAVRFYGEGDKVIGEYQKGEGLLVPRGFKYWFESASSEALEVL
                     RVTAKDQNIDNKRVDLSPQKDWMIQQNTFGARQ"
     gene            complement(3074..4033)
                     /locus_tag="VLM90_10315"
     CDS             complement(3074..4033)
                     /locus_tag="VLM90_10315"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13406.1"
                     /translation="MAGNFLRALFVILIGGSMLAGTPARAADAPQKIRFVHASRSNSM
                     APKLIAQSKGFFRAEGLETEMIQMNPRLAATALVSGEAAFADAFTSVFRGILQGFPIK
                     IVFVHQKKGPYFLLARPEFKEVQQLKGKKLGVATLRGSDHLVAEELLQAKGFNPSLIQ
                     VFAVGDAATRFQSLSSGAVDVIAVGTPHDLMLRQKGFSVLAGPPEVGLPGACVFTPDQ
                     FLRENPQTVRKTLKALLRAHQYILENRQETIQALLQWLPQTPEVAAHSYDFELKTMTK
                     DGLMSDAELEALMVKLGDKKRPLDEVRDFSLARQALKELEAGK"
     gene            4184..>5000
                     /locus_tag="VLM90_10320"
     CDS             4184..>5000
                     /locus_tag="VLM90_10320"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13407.1"
                     /translation="MRSRRGRYLFLTVLIAVLSATTVAPGAELMPLRATYASIGGAFA
                     PLWIAQDKGVFTKYGLAVDLKYMLSATGTQALLSGSVDIVNPATELVEAGLGGARIAF
                     IIGILNRAVLSIYSKPEFKQLSDLKGKILGVTLAGSTTDLAARMLLQQAGMQPGKDIQ
                     ITHLQGMPDMITALSQGRIDAGIVSAPTTLRARQAGLKELVDITARNIPMIHAGLATT
                     RDFIKSNPDKVRRYVQAYIEATKIARTDPETTKQVIGKWTKTDNKEDLDETYNT"
BASE COUNT         1109 a         1567 c         1357 g          967 t
ORIGIN      
        1 actgagaaat ctctccgttc cgagcttccg tggccaacga ggactgcgac gcggatagcc
       61 gcaatccagg cgcacaggtt agaacgccaa gccgctcacc cgctccagca aatcgcggtt
      121 ggcgagtttg gcgtcggcca atatctgctt atcatcgaga cccgcgagct ggcggtcgcg
      181 catcacgatg gcgccgtcga tcatcaccgt ccgaacatcg ctggctttgg cgcagtggac
      241 gatctggctg aagatatcgt ttatcggctg gttatgcgcg gtgtcgatgt caacgagaat
      301 cagatccgcg cgcttgccga cctcgatggt gccgcagagc gagtttaaac ctaacgccct
      361 ggcgccgccg atggtcgcca tgcagagaac atcgtacggt ttgatcacgc cggcatcttg
      421 gtgctgaacc ttctgcaaca gtgacgccgc cttcatcgta tcgaacagat cctgtgaatg
      481 gttgctcgcc gcgccgtcgg tgccgagggc gacattgacg ccttggcgca gcatttccac
      541 caccggcgcc acgccatcgc ccaacatcat gttgctcacc ggattatgcg acaccgacga
      601 gccggtttct ttgagaatgc caatttcatc ctgggaaaca tgcaccgagt gggcgaagat
      661 cgaattcttg gctgggatgc cgaactgatg caaaaattcg acaacgccgc tcttgccatg
      721 ctgccggcgc acagcttcaa ccaccgaatg cgactcggcg acatgggcgc tgatgccaag
      781 ggaattggca tcggcgaagc ggcgcacttc acgaagcaga tcgggcgtcg tgttgatcgg
      841 cggcgtgttc ggcccggtca tgaaagtgag ctgctgagaa tttttatgcc gcgcgagaag
      901 cgcttcgatg agacgaaacg cctgttccgg cttctccttg gtgcattccg gcacgatctc
      961 cccggtatcc ataatcgtcc gcgcaaacac ggaacgtaaa cctgcatcgc gcatcgcccg
     1021 gatcgtctcc agcgcacact cgggactggg attgagaaaa ttatgctcgc agacagtggt
     1081 cacgccgccg cggatcgatt ccaaacaacc gagcagactt cccgcgtaga aatgcgccgg
     1141 cgtaagcacc cgggcgcagc cgtagatgcg cttcagccac ggcatcaact ccaggtcttc
     1201 ccacaccgcg cgcagcaaga cttgatagag atgggtatga gcattgacca ggcccggcat
     1261 gagtacgcag cccgagccgt caagcatctc ctcgttcttg gcagtttccg gtggcgcgcc
     1321 ggcaccaacc tcggcaatcg cactgtcacg cacgcgcaca aagccgttga acgaggcgcg
     1381 ctcggtcatc gcgatgatca gcgcattagt aataatcaga ttgcccatcc ttctgtctct
     1441 atctcacttc cccgtcagcc gctcgaaaaa gccgctcttg cggatctcgt ccatcagggt
     1501 cgtatccatg aaatcctcgg cgcgcgcgcc cttggccttg ggcaccatca acgaatcgag
     1561 gacattctgg atgccgcgcg gctcgggagc gggaaagtca cgaaaggatt tgctcagccg
     1621 ctcgtagagc ggaccgatcg cctcggcatc gctgttactc tcgcgtagta ccccgcgcgc
     1681 gatctccggc cgggtcttaa acacatgaat gccttcgatc agcgccatca ggaaacgctt
     1741 gatagggtcg cgctggttct ttagcagcga gccggagacg acaaccccgt agttggcaaa
     1801 ctcgagaggc agctcggcaa gatcggccag cacccggcaa cagccggtgg cgataatctt
     1861 ggccacgccg gtggaactca ccaacgccgc gtccacctgt ccggcaacca gggcggcgat
     1921 gcgcgtcggc gtattgccgg tctgaagaaa gctcacatcc ttctccggat cgagcttcca
     1981 atggcgcagt gcgacgcggg tcatgatgtc ggatcccgaa ccgaagcggc tgatggtcac
     2041 tcgcttgccc ttcaaatcgc cgggcacttt aatattgctg cgcacgacga acatcggctc
     2101 gatacgattg atcggcacgg cgaccacctt gaggttggag ccggccaccg ccaggttgag
     2161 catcgccgga gtatcgaagc cggcgacgcc gatatcgccc gacgacatcg tctgcgccat
     2221 caaagatccg ctcgacagat agatcgtccg cacgtcgatg ccatgcctgc gccacaaacc
     2281 ggcgcgctcg atgactttca gcaaatccga gccgatgccc gcgccgctgt aacccatatt
     2341 gagcagcggc acgctttgcg ccgctgctaa agccggccac agccagaaca aacaagtcgc
     2401 cagcatcgag cttttgcatc gcctcatcgg attcacctca atgacggcat aaataatata
     2461 cccgacaata aaccgtcaac ggctggagat tattttcaac cgcagcccgc cttgaccgcc
     2521 gtccccaatc gggattatgg tggagcaaat cttcaaaacg aggtgaccca tggcacagga
     2581 gacaaaagag tttcgacata agacccccga gttcgagggc ccaaagaaaa cctggcaggt
     2641 ttgcaacagc gatttgatga aggttcaagt ccaggtggtc aaagacggcg gcgaaaataa
     2701 tctgcacacc cacaccggcg aggatgcctt ctggtatgtc gtcagcggcg cggtgcgatt
     2761 ctacggcgaa ggcgacaagg tcatcggcga atatcaaaag ggcgaaggcc tcctggtgcc
     2821 gcgcggcttt aagtactggt tcgaaagcgc ctcgagcgaa gcgctggaag tgctccgcgt
     2881 caccgccaag gatcagaaca tcgacaacaa acgcgtcgac ctgtcgccgc aaaaagattg
     2941 gatgattcag cagaacactt tcggcgcccg gcaatagtca aaataacgta aggcgtcagg
     3001 ggtgaggcgt taggcgtcca ccccgactcc gaacccctta ccctttaccc ctcaccaccg
     3061 cgcggtagcg cggctatttc cccgcttcca actctttcag cgcctggcgc gccagcgaga
     3121 aatcccgcac ttcgtcgagg ggtcgcttct tatcgcccaa cttgaccatc agagcttcga
     3181 gttcggcatc gctcatcaaa ccgtccttgg tcatcgtttt caattcgaaa tcgtaggaat
     3241 gggccgccac ttccggcgtc tgcggcagcc attgcagcag cgcttggatg gtctcctggc
     3301 ggttttcgag aatatattga tgcgcgcgca acagcgcttt caaagttttt cgcaccgtct
     3361 gcggattctc acgcagaaac tgatccggcg tgaatacaca ggcaccgggc aaaccgactt
     3421 ccggcggccc ggcgagcacg gagaaccctt tctggcgcag catgaggtca tgtggcgtgc
     3481 ccaccgcgat cacatcgacg gcgccgctgc tgagtgattg aaagcgcgtc gccgcatcgc
     3541 cgacggcgaa cacctgaatc aagcttgggt tgaagccttt cgcttgtaat aactcctccg
     3601 ccaccaggtg atcggaacca cgcagcgtcg ccacacccag cttcttgccc ttcaactgct
     3661 ggacctcttt gaactccggc cgcgccagta aaaaatacgg cccctttttc tggtgcacga
     3721 agacgatctt gatcgggaaa ccctgcagaa taccgcgaaa gacactggta aaagcgtcgg
     3781 cgaacgccgc ttcgccgctc acgagcgcgg ttgcggccaa gcgcggattc atctgaatca
     3841 tctcggtctc cagaccttcg gctctaaaga aacctttgga ctgggcgatc agcttgggcg
     3901 ccatcgagtt acttcggctg gcgtggacaa agcgaatttt ctgcggcgca tccgccgccc
     3961 gcgccggcgt gcccgccaac atagagccac cgatcaggat cacaaataaa gcccgcaaga
     4021 aattaccggc catcgatccc tccgattatt tcgcttaccg aatccttcct aacataagca
     4081 gctcggaaag agatagcgct caaagccaat ttatcgccgc ccctagcgca acctgccatt
     4141 ttttaatata tctgcctaaa cttttttctg agggggaatt ccgatgcgct ctcgtcgtgg
     4201 ccgttacctt ttcttgaccg tactgatcgc cgtcctatcg gcaaccaccg tggctcccgg
     4261 cgccgagctg atgccgctgc gggcaaccta tgcttccatt ggcggcgcct ttgcgccgct
     4321 gtggatcgcc caggacaaag gcgtcttcac caagtacggc ttggcggtgg atctcaagta
     4381 catgctttcg gccaccggca ctcaagcgct gctctcgggt agcgtcgaca tcgtcaaccc
     4441 ggcaactgaa ttagtcgaag ccggcctcgg cggcgcgcgc atcgctttca tcatcggcat
     4501 tctcaatcgt gcagttctgt cgatctacag caaaccggag ttcaaacaat tatcagatct
     4561 aaagggcaag attctcggcg tcacgctcgc tggctcgacc accgacctgg cggcacgcat
     4621 gttgctccag caagccggca tgcagccggg caaagacatt cagattaccc atctccaagg
     4681 catgcccgac atgatcaccg cattgagcca gggccgcatc gacgccggca tcgtctcggc
     4741 gccgacgacg ttgagagcgc gtcaagccgg actcaaagag ctggtcgaca tcacggcgcg
     4801 gaatattccg atgatccatg ccggtctggc gaccacccgc gacttcatca agagcaatcc
     4861 ggacaaagtg cgccgctacg tccaggccta tatcgaggcc accaagatcg cccgcaccga
     4921 tccggagacc actaagcaag tgatcggcaa atggaccaag actgacaaca aagaagacct
     4981 cgacgaaaca tacaacacct
//
LOCUS       DATIRS010000817         1572 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_59589, whole genome shotgun sequence.
ACCESSION   DATIRS010000817 DATIRS010000000
VERSION     DATIRS010000817.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1572
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59589"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(108..1271)
                     /locus_tag="VLM90_10325"
     CDS             complement(108..1271)
                     /locus_tag="VLM90_10325"
                     /inference="COORDINATES: protein motif:HMM:TIGR02032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045550 - geranylgeranyl reductase
                     activity [Evidence IEA];
                     GO_process: GO:0015995 - chlorophyll biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0030494 - bacteriochlorophyll biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="geranylgeranyl reductase family protein"
                     /protein_id="HSQ13408.1"
                     /translation="MQNDFDVIIVGAGPAGAASAISLARRGYAVALIDKEEFPREKLC
                     GDFINPSNWPMLAQLGVTRDLFMQDHEIVTAFRITAVSGAAAETALPTIDGTPVYGLG
                     LRRFFFDEILLRKARQEGATALLGCRVKALHRLANGWRVSYGHGESVEELNARVLIGA
                     DGRNSWVAHHLGMARPAAHGGGRIGFQLRLNYSPGLQGRIEIHLFPGGYAGLLGLGDG
                     TINLCLAVDGGRLGERVGIEALLQSHLPRNPYLREILRASEPVEAVRSTYPVYFPRRR
                     SVDAGLVLIGDAARVNEPVSGEGIFFAMRSGAIAAETVDQAFRRGDFSARSLFQYERR
                     CRGEFRRRRALNGAIRFLMYRPALLAPFIHLSEKKKRLLESLVRAICRPEAAA"
     gene            complement(1271..>1572)
                     /locus_tag="VLM90_10330"
     CDS             complement(1271..>1572)
                     /locus_tag="VLM90_10330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13409.1"
                     /translation="VILRMKPRRSQRVKMSLRKNCITTRRVVTTGVAALALNAIGASA
                     YVAAQISLFGAEPRSLRWPLILAAWRALVHQAGIGKFHVMPLLPLRMGAWIGVVG"
BASE COUNT          346 a          507 c          467 g          252 t
ORIGIN      
        1 tgaactctgg ggccatgctc aagtatcctt catcattggc aaccacaacc ggagcggtgc
       61 tgtgaccata accaagcgcg acagcgacgg caagccacag ccaagattca agcggcggcc
      121 tccggccggc agatggcgcg gaccaaggat tcgagcaagc gcttcttttt ctcggacaga
      181 tggatgaagg gcgccagtag cgccggacga tacatcagaa agcgaatcgc accattcaag
      241 gcgcggcgcc ggcgaaattc tccacggcag cgccgctcat attgaaacaa cgatcgggcg
      301 gaaaaatccc cccggcgaaa tgcctggtcg acggtttcgg cggcgatggc gccgctgcgc
      361 atggcgaaaa agatcccttc gccgctaacc ggttcgttaa ctcgcgcggc atcgccgatc
      421 agcacgaggc cggcgtcaac cgagcggcgc cgcggaaaat agaccgggta ggtcgagcgc
      481 accgcctcca ccggctcgct cgcgcgcagg atctcgcgca gatagggatt ccgcggcagg
      541 tgcgattgca gcaatgcctc gataccaacg cgctcgccaa ggcgcccgcc atcgaccgcc
      601 aagcaaaggt tgatcgtgcc atcgccaaga cccaacaacc cagcgtagcc gccggggaaa
      661 agatggattt caatccggcc ctgcagacct ggcgaatagt tgagccgcag ttgaaagccg
      721 atacgcccgc cgccgtgggc cgccggcctg gccatcccga gatggtgcgc cacccaagag
      781 ttacggccat cggcaccgat caatacccgc gcgttgagtt cctcgacgga ttcgccatgg
      841 ccatagctaa cccgccagcc attcgccagg cgatgtaacg ctttgactcg gcagcctagc
      901 agggccgtcg cgccttcctg ccgcgctttt cgcaaaagaa tttcatcgaa gaaaaagcgc
      961 ctgagcccaa ggccgtaaac cggcgtcccg tcaatcgtcg gcagcgccgt ttcggccgcc
     1021 gcgcccgaga cggcagtgat gcgaaacgcc gtgacgattt catgatcctg catgaataga
     1081 tcgcgggtca cgccaagctg cgcgagcatc ggccagttgc ttggattgat aaaatcgccg
     1141 cagagtttct cgcgcgggaa ctcttctttg tcgatcagcg cgaccgcgta tccgcgccgc
     1201 gccagcgaaa tggccgaagc cgcgccagcc gggccggcgc cgacgatgat aacgtcaaaa
     1261 tcattctgca tcagcccacg accccgatcc acgcgcccat gcgcaacggc agtaacggca
     1321 tgacatgaaa tttcccgatg ccggcttggt gaacaagcgc gcgccacgca gccaggatta
     1381 acggccagcg tagcgaccgc ggctcggcgc caaacagcga gatctgcgcg gcaacatagg
     1441 cgctagcgcc gatagcgttg agagccagcg cggcgacgcc ggtggtgacc acgcggcggg
     1501 tggttatgca attttttcgc aagctcatct tgactcgctg ggagcgacga ggtttcattc
     1561 ttaagataac at
//
LOCUS       DATIRS010000818         2992 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1142550, whole genome shotgun sequence.
ACCESSION   DATIRS010000818 DATIRS010000000
VERSION     DATIRS010000818.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2992)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2992)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2992
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1142550"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1726
                     /locus_tag="VLM90_10335"
     CDS             <1..1726
                     /locus_tag="VLM90_10335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13410.1"
                     /translation="AALKVELDQAQGANAGLRGELQESTDCVAELEALLKSSQTATAV
                     VAAERAQLRGELENLAALHNQTKADAARELAQGRDALESELSALRNELQQKAWSLAQH
                     QASVENLAQIHREQMRKQEARLSEQQPVIEQQSRELEQALIRANGLQRQVEELRGALQ
                     QAQAAGASRAEQIRQEYAARLETVNSLLAIKSAEMANSDAVRANVEASLRGELSRLHS
                     EIQSRTSALQSREDELNRVRAEMTSVQNRLVQLESVSARTESEAREISQAKSGLESEL
                     AALRNQLHQGSSAVAHQQAAMDDLAARHRSQVEQLEANLSEQHGASEEHRREVDQAQA
                     QLTLLHGRIEELQSTLQQTEVSANSRTEQLRQEYAARVDTLKRELVERSAELQDRAGA
                     NSDSEQALRSEIDRLIGEAQERNQILQSRNDELVRVKNDLDSLAVRFSQLESHAVHAQ
                     SNASGEAESMRTGFQAQLALLQAELSQKEWALEERQAIIAGIEQEHRQQLDALRQQLA
                     EEEQSAIPADNTFVMGDPNLTEAQRDKLLKLDDMVKAIRSSDNVSAPAQSGRRWQSGF
                     GWKRRWRS"
     gene            1778..2503
                     /locus_tag="VLM90_10340"
     CDS             1778..2503
                     /locus_tag="VLM90_10340"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HSQ13411.1"
                     /translation="MIQTERVTSGIKGLDPLIEGGFPKGRSILVTGEPGTGKTIFALQ
                     FLAEGLARGEKCIFVTADEGPLDVLEQAASMGWDFERHAEQNELSILNAATYLSSLPG
                     ASRERQIDIHKAVSDLATFVNRLGAERLVLDPAGPFVLLRDVATRIQDQTRLLIKLLR
                     SSMATTNLLTSYAVPRTGERSMHGIEEYMVAGAVVLEMIWRNDGALARSLIVEKMRCT
                     DVKPTQLEFDIVKGEGLVVLPKP"
     gene            2530..>2992
                     /locus_tag="VLM90_10345"
     CDS             2530..>2992
                     /locus_tag="VLM90_10345"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HSQ13412.1"
                     /translation="MANERIATGITGLDALLLGGFSRGRTYLFAGESGTGKTIACLQL
                     VATRLKAGDKAVYVTVDERPSEILEAAAALGWDLQTYIQEKHLIILDASPYFGARGGG
                     EKGIDPQKIVADLGNYVRRLVATLLIIDPVTPFSLPPDASSPAQDQARSLIQ"
BASE COUNT          713 a          904 c          884 g          491 t
ORIGIN      
        1 ggccgcgcta aaagttgagc tcgaccaggc acaaggcgcc aacgccggct tgcgtggcga
       61 gctgcaggaa tcgacagact gcgtcgctga actcgaggcg ctgctaaaaa gcagccaaac
      121 cgccacggcc gtggtcgcag ccgagcgcgc acagctgcgc ggcgaacttg aaaaccttgc
      181 cgcgctccac aaccagacca aggccgatgc cgcccgcgaa cttgcccagg gccgcgacgc
      241 cttggaaagc gaactcagcg ccctgcgcaa cgagttgcaa caaaaagcct ggtcgctggc
      301 acagcaccag gccagtgtcg agaacctggc gcagatccac cgcgagcaga tgcgcaaaca
      361 ggaagcgcgg ctgagcgagc aacaaccggt catcgaacag caatcgcggg aactggaaca
      421 agcgctcatc cgcgccaatg gcttgcagcg gcaggtcgaa gaactgcgcg gcgcgctgca
      481 gcaagcccag gccgccggcg ccagccgggc cgagcagatt cgtcaggaat acgccgcccg
      541 gttggaaacc gtcaactcgc tgctggcaat aaagtcggcg gagatggcca acagcgacgc
      601 ggtccgagcc aatgtcgaag cgtcgttgcg tggcgaactc agccgcctgc acagcgaaat
      661 acagtcgcgc acttcggcgt tgcagagccg ggaggacgag ctcaaccgcg tgcgcgcgga
      721 aatgacctcg gtacagaatc gccttgtgca gttggaatcg gttagcgcgc gcaccgaaag
      781 cgaagcgcgt gagatcagcc aggctaagag cggtctggag agcgagctcg ccgccctgcg
      841 caaccaattg caccaaggat cttccgcggt agcgcaccaa caggcggcca tggatgatct
      901 tgcagcgcgc caccgcagcc aggtggaaca acttgaagcg aatctaagcg agcagcatgg
      961 agcgagcgaa gagcatcgac gggaagttga ccaagcgcaa gcgcagctca ccctattgca
     1021 cggccggatt gaagaactgc aaagcacatt gcagcagacc gaagtcagcg ccaacagccg
     1081 caccgaacag ctgcgccaag aatatgcagc gcgcgtcgat acgctcaaac gcgaactggt
     1141 cgagcgttcc gccgagcttc aggaccgcgc cggcgctaat tccgacagcg agcaagctct
     1201 acgcagcgag atcgatcggt tgatcggcga agcccaagaa cgcaatcaga tcctgcaaag
     1261 ccgcaacgat gagttggtac gggtgaaaaa cgacctggac agtttggccg tgcgcttcag
     1321 tcaattagag tcccacgctg tccacgccca aagtaacgcc agcggcgaag ccgagagtat
     1381 gcgcaccggg tttcaggcgc agttagcgct gctgcaggcc gaactcagtc aaaaggagtg
     1441 ggccctggaa gagcgccaag cgatcatcgc cggaatcgaa caagaacatc gccagcagct
     1501 cgacgccttg cgccagcagt tagccgagga agaacagtca gccattccgg ccgacaacac
     1561 attcgtcatg ggcgatccta acttgaccga ggcccagcgg gacaaactgc tcaaactcga
     1621 cgacatggtc aaagcgattc gctccagtga caatgtcagc gctccagcac aatcgggacg
     1681 gcgttggcaa agcggcttcg gatggaaacg gcgctggcgc tcgtaacgcc tggtaaaatc
     1741 tggctagcag ctgaaagcgg caaagcgaag gataacgatg attcaaacag aacgcgtaac
     1801 cagtgggatc aaaggtttgg acccattgat cgaaggtggc ttccccaagg gtcgttcgat
     1861 cctggtaacc ggcgagccgg ggaccggtaa aaccattttt gcgctacagt ttctcgccga
     1921 gggtttagcg cgcggtgaaa aatgcatctt cgtcaccgcc gacgaaggac cgctggacgt
     1981 gctcgaacaa gccgcgtcga tgggttggga ctttgaacgc catgcggagc aaaatgaatt
     2041 gtcgatcctt aacgccgcga cctatttaag ttcactgccc ggcgccagcc gtgagcgcca
     2101 aatcgacatt cacaaagcgg tgagcgacct ggcgactttc gtcaatcggc ttggcgccga
     2161 gcgattggtg ctcgatcccg ccgggccgtt tgtcctgttg cgcgacgtcg ccacacgaat
     2221 ccaagatcaa acccgcttac tgatcaaatt gctgcgttct tcgatggcga ccaccaacct
     2281 tctcacttcc tatgcagtac caagaaccgg cgagcgcagc atgcacggca ttgaagaata
     2341 catggtcgcc ggcgccgtcg tcttggaaat gatttggcgc aacgatggcg cgctggcgcg
     2401 cagcctgatc gtcgaaaaaa tgcgctgtac cgacgttaaa ccgacccaac tggaattcga
     2461 catcgtcaag ggtgagggct tggtggtcct gccgaagccc tgacaaacgg tcgcccaatc
     2521 tctcgattaa tggctaacga acgcatcgcc accggcatca ccggcttgga tgctctgctg
     2581 ctcggtggat ttagccgtgg gcgcacctat ctctttgccg gcgaatcggg caccgggaaa
     2641 accatcgcct gtttgcagtt agtcgctacc cgcctcaaag cgggcgataa ggcggtctat
     2701 gttaccgtcg acgagcgccc ttcggagatc ttggaggccg ccgcagcatt gggttgggat
     2761 ctccaaacct atatccaaga aaagcacttg atcatcctcg acgcttcgcc ctacttcggt
     2821 gcccgcggcg gcggcgaaaa aggcatcgat ccgcaaaaga tcgtcgccga tctcggcaac
     2881 tatgttaggc ggctcgtcgc gactctattg attatcgatc cggtaacgcc gtttagtctt
     2941 ccccccgacg ccagtagtcc ggcgcaagat caagcgcgct cgctgatcca ac
//
LOCUS       DATIRS010000819         3427 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1633676, whole genome shotgun sequence.
ACCESSION   DATIRS010000819 DATIRS010000000
VERSION     DATIRS010000819.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3427)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3427)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3427
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1633676"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(71..733)
                     /locus_tag="VLM90_10350"
     CDS             complement(71..733)
                     /locus_tag="VLM90_10350"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSQ13413.1"
                     /translation="MTTPLDILVTGGTGYIGQHLIPLLIARGHRVRVLARDQSMSRVP
                     SGAAGVKGDALSAESVASALLPGDTVIHLVGTPHPSPSKADQFEKVDLVSIRSTVRAA
                     QKVGVAHLIYVSVAQPAPIMQAYLWVRMLGETMIREAGLTASIVRPWYVLGPGHWWPK
                     LIRPLYKLADLIPSLRPMVERLGLLNIEQMVTAMVYAVENPPEIGQRRIYDVPAIRRA
                     KL"
     gene            complement(1050..1751)
                     /locus_tag="VLM90_10355"
     CDS             complement(1050..1751)
                     /locus_tag="VLM90_10355"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSQ13414.1"
                     /translation="MRVAVLADLHVGSPFNGIDKLEHIVDLTLKAKPDLILLAGDYII
                     HGVVGGKFVEPETIAKGLQRLAAPLGVFAVLGNHDRWRGGEGIRTALESHGIKVLDDD
                     SVPLKLAECRIWLAGLSDFWTGARAYQAALALIPPGAPAIAFTHNPDSFPVLPKPVSL
                     TIAGHTHGGQVRLPLLGRLVVPSDYGERYAIGHVVENGRHLFVSPGLGTSIFPVRFLV
                     PPEVSVLTLRSDKPN"
     gene            complement(1911..2933)
                     /locus_tag="VLM90_10360"
     CDS             complement(1911..2933)
                     /locus_tag="VLM90_10360"
                     /inference="COORDINATES: protein motif:HMM:NF021508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2235 domain-containing protein"
                     /protein_id="HSQ13415.1"
                     /translation="MKRIVICFDGTWNRPAEESLPSDQQVETNVRRFYESIRQQSADG
                     VKQVKWYDEGVGTQWYDRVIGGGIGAGLELNIVQGYEFLAKAYEDGDEIYVLGFSRGA
                     YTARSLVGMLRNCGLIHPKHLALRVTMAYGIYRTRDDNADSFTAKLFRSSFGREVKIK
                     FIGVWDTVGALGVPLDILNDLNMKFYEFHDTNLSGIVENAYHAMAVDEHRQDYDICRW
                     NPVEKPQQNLEQRWFIGAHCDVGGGYPDRRLSDMALRWMQDKASALGLALDAVAIDAK
                     SYLGDSTDSYAKFLKGVYAKRNARHYRAIGASKFGNEVVDPSVQQRRKEDRDYEPQND
                     ELPKLV"
     gene            complement(3068..>3427)
                     /locus_tag="VLM90_10365"
     CDS             complement(3068..>3427)
                     /locus_tag="VLM90_10365"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HSQ13416.1"
                     /translation="RDRWGLPLPRVTFDFHQNEHRLQKYMAGVGDRIMRATGASKVWT
                     EEKGRPNRWAGGTRMGASSKNSVVNHNCQTHDIANLFVVGASVFPTMAGYPPTATVAA
                     LSYRTSEFILQQKDWFK"
BASE COUNT          743 a         1066 c          951 g          667 t
ORIGIN      
        1 cagatacgac ctcgtgtctt gaggacaccg ggccaaccaa accaattctt agacaggaaa
       61 ttcaaaacct ttacaacttc gcccggcgaa tcgccggcac gtcgtaaatg cgccgctgcc
      121 caatctccgg cggattttcc acagcgtaca ccatcgcggt caccatctgt tcgatgttta
      181 gaagccccaa gcgctcgacc atcggccgca gcgacggtat caagtcggcg agcttgtaca
      241 gcggccggat cagtttgggc caccagtggc cgggacccag tacataccaa ggccggacga
      301 tgctcgccgt caggccggct tcgcgaatca tcgtttctcc taacatgcgc acccagagat
      361 aagcctgcat gatcggcgcc ggctgagcga cactgacata aatcagatgg gcaacgccga
      421 ccttttgcgc cgccctaacc gtcgaacgga tcgataccag atcgactttc tcgaactgat
      481 ccgctttgct cggactcgga tggggcgtgc cgacaagatg gatcacggta tcgcccggaa
      541 gaagcgcgct ggcaacggat tcggcgctta gcgcatcacc cttcactcct gccgcgccgc
      601 tgggcacgcg gctcatcgac tgatcgcgcg ccagcacgcg cacccgatgg ccgcgcgcaa
      661 tgagcagtgg aataagatgc tgaccgatgt agccggtgcc gccggtgacg agaatatcga
      721 gtggcgttgt cattgggtcg agtctaggcg gaaacgcgat gagtatatcg ggactcggaa
      781 gccgacgcga acggtcgagc gcggcgccgg cacacatgtt cgcaagcgcc tttatcgtca
      841 tgccggcctt tcgtctacgc acaagatata ctccagccgg catctagtgc taatgcgtcc
      901 gtcataccgt tggagaacgc taggggcatc caggtgacgg actatgtccg tcataccgtt
      961 gaaaaacggt atccaggttg agggatgggg atggattccg gtctatgccg gaataatgga
     1021 tcaagagaat tcgcgttcca ggcgcgacac tagttgggct tgtcggagcg cagcgtcagc
     1081 accgacactt ccggcgggac taaaaaccgc acggggaaaa tacttgtgcc gagtcccgga
     1141 ctgacgaaca gatggcggcc gttctcaacc acatggccga tggcataacg ctcgccatag
     1201 tccgacggca ccaccaaccg ccccaacagc ggcaagcgaa cctggccgcc atgagtgtgc
     1261 ccggcaatgg tcagactgac cggtttcggc agtaccggaa agctgtccgg attgtgcgtg
     1321 aaagctatgg cgggcgcgcc tggtgggata agcgccaacg ccgcttgata cgcgcgcgca
     1381 ccggtccaga aatcgctcaa accggctagc caaatccggc attctgccaa tttcagcggc
     1441 accgaatcgt cgtcgagaac tttgatgccg tgggactcca gcgccgtacg aatcccctcg
     1501 ccgccccgcc aacgatcatg attgccgagc acggcaaaca cgccgagcgg cgctgccaaa
     1561 cgttgcagtc ccttggcgat ggtttccggc tcgacaaact tcccgccgac aacgccatga
     1621 atgatgtagt cgccggcgag caaaatcaga tcgggcttgg ccttgagcgt gagatcgaca
     1681 atgtgctcca gcttatcgat gccgttgaag ggcgagccca catgcagatc ggccaagact
     1741 gcgacacgca agccatcgca gctgcttggc catcccggca gtgtcagttc atggtcctcg
     1801 ttattaagac tcgccggctc gagccaaaac gcccacaagc ccaagccgag cgcacatagc
     1861 gaaacgcaaa caaaaagctt ccgtacccca ataaccatcc tcacagcata tcacaccagc
     1921 ttcggcaact catcgttttg cggctcatag tcgcggtctt ccttacgacg ctgctgcacc
     1981 gacgggtcga ccacttcatt gccgaacttg gacgcgccga tggcacggta gtggcgcgcg
     2041 ttgcgcttgg cgtagacgcc tttgagaaac ttggcgtagg agtcggtgga atcgccgaga
     2101 taactcttgg cgtcaatggc gacggcgtcg agcgccaagc ccagcgcgct ggctttgtcc
     2161 tgcatccagc gcagcgccat gtcggacaag cgccggtccg ggtacccgcc gccgacatcg
     2221 cagtgtgcac cgatgaacca gcgctgctca agattctgct gcggcttttc caccgggttc
     2281 caccggcaga tgtcgtagtc ttggcgatgc tcgtcgaccg ccatggcatg ataggcgttc
     2341 tcgacgatac cgctgagatt ggtgtcatgg aactcgtaga acttcatgtt caagtcattg
     2401 agaatgtcga gcggcacgcc gagggcgccg acggtatccc atacgccgat gaatttgatc
     2461 ttaacctcgc ggccaaacga agaacgaaag agcttggcag taaacgaatc ggcattatcg
     2521 tcccgcgtgc ggtaaatgcc gtaggccatc gtgacgcgca gagcgagatg cttgggatgg
     2581 atcagaccgc agttgcgcag catgcccacg aggctgcgcg ccgtgtaggc gccacggctg
     2641 aaaccgagca cgtagatctc gtcaccgtct tcgtacgcct tggccaaaaa ctcatagccc
     2701 tggacaatat tcagttccaa cccagcgccg atgccgccgc cgatcacccg gtcgtaccat
     2761 tgagtgccga ccccttcgtc gtaccatttc acttgtttca cgccatcggc cgactgttgg
     2821 cgaatcgact cgtaaaaccg ccgcacgttg gtttccacct gctgatcgct cggcagcgac
     2881 tcctccgccg gcctgttcca agtgccatcg aaacaaataa cgatgcgttt cataaaacct
     2941 cccgctgaga ttggacgaat ggagtgatgg cgtactggag tgttggttcc gaaaacccat
     3001 tactccacca ctccaatact ccagttctcc agttcatttc tccatcactc caatttttcc
     3061 gtccattcta cttgaaccaa tccttctgct gcaaaataaa ctccgaggtc cgataactca
     3121 acgccgccac ggtcgcagtc ggtggataac cggccatagt tggaaacacc gacgcgccga
     3181 ccacgaagag attggcaata tcgtgggtct gacagttgtg attgacgacg gaatttttcg
     3241 agctggcgcc catgcgcgtg ccgccggccc agcggttggg ccggcccttc tcctccgtcc
     3301 atactttgct cgccccggtg gcgcgcatga ttctatcacc cacgccggcc atgtactttt
     3361 gcagccgatg ctcgttctgg tggaaatcga aggtcacccg cggcagcggc agcccccagc
     3421 ggtcgcg
//
LOCUS       DATIRS010000820         4088 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1927607, whole genome shotgun sequence.
ACCESSION   DATIRS010000820 DATIRS010000000
VERSION     DATIRS010000820.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4088
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1927607"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..885)
                     /gene="gcvPA"
                     /locus_tag="VLM90_10370"
     CDS             complement(<1..885)
                     /gene="gcvPA"
                     /locus_tag="VLM90_10370"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: protein motif:HMM:NF001696.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPA"
                     /protein_id="HSQ13417.1"
                     /translation="MRYTPHTGADKERMLREIGCAAVEDLYRHVPQSLRDQAAIGLPA
                     GLTELAVRRRMAALAARNDSAADWDFFLGGGIYHHFIPSAVDATISRAEFSTSYTPYQ
                     PEVSQGTLQALFEYQTLICQLTGMEVSNAAVYDGASAVAEAVLMSRRIQPAKKRRVLM
                     SRALHPQYRAVVATYLKNLDDVRLEEVPFDAGRGATDFDQLKRLLDDQTMCVLLGYPN
                     FFGVIEDPAPIRAACDSVGAHLVTVTSEPLSLALLKPPGAFGADIAVGEGQSLGVPMS
                     LGGPAFGFFACQKKFVRNI"
     gene            complement(895..1362)
                     /gene="gcvH"
                     /locus_tag="VLM90_10375"
     CDS             complement(895..1362)
                     /gene="gcvH"
                     /locus_tag="VLM90_10375"
                     /inference="COORDINATES: protein motif:HMM:NF002270.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HSQ13418.1"
                     /translation="MEFPEGLKYSKEHEWVLVEGTSATIGITEFAQEDLGDIVFVELP
                     EVGEKIVKDDPFGAVESVKAVSDIYAPVSGEVVETNEILPDNPETINDDPYGDGWMVR
                     VELSDIDDLKDLMDADEYAEYVAQQKEDDDDEDDDDEDEDDDEAENEDEDKDK"
     gene            complement(1398..2483)
                     /gene="gcvT"
                     /locus_tag="VLM90_10380"
     CDS             complement(1398..2483)
                     /gene="gcvT"
                     /locus_tag="VLM90_10380"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR00528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004047 - aminomethyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HSQ13419.1"
                     /translation="MALKRTPLYAAHRRAGAKMVEFAGWEMPVQYRGVIEEHLAVRGK
                     AGLFDVSHMGEIEVRGAGALEFCQRLTANDVARLQVFQAQYSFLLNEQGGVVDDVIIY
                     RVKPEAYFICVNASNIDKDFAWLSRHSGADVEVDNQSAMYAQLALQGPAADAILQPLL
                     AQPLAQIKSFHFAFADVAAIRCMVARTGYTGEPGFELYCHSDAALGLWNALMIAGESH
                     GLVAVGLGARDTLRLEKAYPLYGHELDDSTTPLEAGLEWVLKLAKPAFFGRDRLLQQQ
                     QQGVERKLVGIEALEPGIPRGGYSVCKDGVKIGAITSGTKSPSLGKAIALAYIASAEA
                     WIDNRLEVEIRGRQIPVKIVSLPFYRR"
     gene            complement(2514..3374)
                     /gene="folD"
                     /locus_tag="VLM90_10385"
     CDS             complement(2514..3374)
                     /gene="folD"
                     /locus_tag="VLM90_10385"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: protein motif:HMM:NF008058.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HSQ13420.1"
                     /translation="MATIIDGKAVAKEVQQQIKEDVEGLERRWSMAPGLAVVLVGDDP
                     ASHIYVRNKEKACKEVGIKSFEHFLPATVSERELLALVHQLNKDKHVHGILVQLPLPP
                     HIHSEKILNAVSHFKDVDGFHPVNQGNLIVGADGYRPCTPLGVMKLLESVNCDPKGKN
                     AVVVGRSNIVGKPVALMLLEKHATVTICHSRTASLRDEVARGDIVVVAIGKAGIVRGE
                     WIKPGAVVIDVGINRMPSGKLCGDVEFESAKERASAITPVPGGVGPMTICMLLFNTLK
                     AAKDSLQRER"
     gene            3610..>4088
                     /locus_tag="VLM90_10390"
     CDS             3610..>4088
                     /locus_tag="VLM90_10390"
                     /inference="COORDINATES: protein motif:HMM:NF018234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSQ13421.1"
                     /translation="MSAPRTIEEVKKDIRDRVGHRAPFLHADKAESEQALARMADFEG
                     ETWAAAWNELGAKWQDQAMAAEKAGNAAEAKSAYLKSYGYYGIARHPFPSTPGKHHGY
                     LKTREMFLAASKYFDIPVEKVSIPFHGQAIVGHLRLPKQLPAPMIMHWGGIDNWKEER
                     "
BASE COUNT          881 a         1249 c         1125 g          833 t
ORIGIN      
        1 gatatttctg acgaactttt tttggcaggc gaaaaatccg aaagccggcc cgccgagact
       61 catcggcacg cccaagctct gtccctctcc caccgcgata tcggcgccga acgcgcccgg
      121 cggctttaac aacgcaagag acaagggctc gctagtgacc gtgaccaggt gagcgccgac
      181 gctgtcgcat gccgcgcgga tcggcgccgg gtcttcgatt acgccgaaaa aattcggata
      241 gcccaagagc acgcacatgg tttggtcatc gagcagccgc ttgagttggt caaagtccgt
      301 cgcgccgcgg ccagcgtcga aaggaacctc ttcgaggcga acgtcgtcaa gatttttcag
      361 ataggtcgcc accacggcac ggtactgcgg gtgcagcgcc cgcgacatca gcacgcggcg
      421 ctttttggcc ggttgaatgc gccgcgacat gagaaccgcc tcggcaaccg cggaagcgcc
      481 atcgtagacc gccgcattcg agacttccat gccggtgagt tggcaaatca gcgtctggta
      541 ctcgaagagc gcctgcagtg tgccctggct gacctcgggc tgatatggcg tgtacgaagt
      601 cgaaaattcc gcacgcgaga tggtcgcatc cacggcgctg ggaatgaaat gatggtagat
      661 gccgccgccg aggaaaaaat cccagtcagc cgccgagtca ttgcgtgccg ccagagcggc
      721 catgcgccgg cgcactgcca gctcggtcaa tccggcggga aggccgatcg ccgcctgatc
      781 gcgcaatgac tgcggcacat gacgatagag atcttcgact gcggcgcagc caatttcccg
      841 cagcatgcgc tctttgtcag cgcccgtatg gggggtgtaa cgcatcagcg tacgctactt
      901 gtctttgtct tcgtcctcgt tctctgcttc gtcatcgtcc tcatcctcgt cgtcgtcatc
      961 ctcgtcgtcg tcgtcttctt tttgctgcgc gacatactcg gcatattcgt cggcgtccat
     1021 cagatccttg agatcgtcga tatcggataa ttcgacgcgc accatccagc catcgccata
     1081 ggggtcatca ttaatggtct cggggttgtc cggcaagatt tcgttggtct ccaccacctc
     1141 gccgctcacc ggcgcgtaga tatccgacac cgccttgacc gactccaccg cgccgaaggg
     1201 atcgtctttg acgatcttct cgcccacttc aggtaactcg acaaaaacaa tgtcgcccag
     1261 atcttcttgg gcgaactcag tgataccgat ggtcgcactg gtgccttcga ccagcaccca
     1321 ttcatgttct ttggaatatt ttagcccttc gggaaactcc atcgcaaacc tccttcatga
     1381 tccatatggc tgcgccgcta acggcgataa aatggcaatg atactatttt taccggaatc
     1441 tgccggccac gaatttctac ctcgaggcga ttatcgatcc acgcctcagc gctggcaata
     1501 taggccaacg caatggcctt gcccaaggac ggcgacttcg tcccgctggt aatcgcgcca
     1561 attttgacgc cgtctttgca gacgctataa ccgccgcgcg gaatgccggg ctccagcgct
     1621 tcgattccaa ccaacttgcg ctccacccct tgctgttgtt gttggagtaa gcgatcgcgg
     1681 ccgaaaaacg ccggtttggc aagcttcaac acccactcca agcctgcttc caacggcgtc
     1741 gtactgtcat ccaactcatg gccgtaaagc ggataggctt tttccagccg cagcgtatcg
     1801 cgcgcgccca gtcccaccgc caccaagccg tgcgactcac ctgcgatcat caacgcattc
     1861 cacaatccga gcgcggcatc actgtgacaa taaagctcaa atcccggctc gccggtgtag
     1921 ccagtgcgcg ccaccatgca gcgtatcgcc gcgacgtcgg cgaacgcaaa gtgaaacgac
     1981 ttgatctgtg ccagcggctg agcgagcaac ggctggagaa tcgcatctgc cgccggcccc
     2041 tgcaacgcca actgggcgta catggcgctt tgattatcca cctcgacatc ggcgccagag
     2101 tggcgcgaca gccaggcgaa atccttgtcg atgttcgaag cgttgacgca gatgaaataa
     2161 gcctcgggct tgacccgata aataatcaca tcgtcgacca cgccgccctg ctcgttgagg
     2221 aggaaactgt actgcgcttg aaagacttgc aagcgcgcca catcgttggc ggtgagccgc
     2281 tggcagaact ccagcgcgcc ggcgccgcgc acttcgatct cgcccatatg gctgacatcg
     2341 aacaggccgg ctttgccgcg caccgccaga tgctcttcga tgacgccgcg gtactgcacc
     2401 ggcatttccc agccggcgaa ctcgaccatc ttggcgccgg cgcgccgatg ggcggcgtag
     2461 agtggggttc tttttagcgc cacagccacc gccgggaacg ccaatgaatg gttttaacgt
     2521 tcacgctgga gagagtcttt cgcggccttt aaagtattga agagcaacat gcaaatcgtc
     2581 attgggccga caccacctgg caccggagtg atcgccgagg cgcgctcctt ggcgctttcg
     2641 aactcgacat cgccgcacag cttgccgctc ggcatgcgat tgatgccgac gtcgatcacc
     2701 accgcgccgg gcttgatcca ctcgccgcgc acgatgccgg ccttgccgat ggcgacgacg
     2761 acaatatcgc cgcgggcgac ttcatctcgt aaactcgcgg tgcgcgaatg gcagatggtc
     2821 acggtggcat gtttctcgag caacatgagc gccaccggct tgccaacgat attgctgcgg
     2881 ccgaccacca cggcattttt tcctttagga tcgcagttca ccgattcgag aagtttcatc
     2941 acaccgagcg gcgtgcaggg ccggtagccg tccgcgccga cgattaaatt accttgattg
     3001 accgggtgga agccgtcgac atctttgaaa tgcgaaaccg cattgagaat tttttccgaa
     3061 tgaatatgcg gcggcagcgg caattgtacc aggatgccat gcacatgttt gtctttgttc
     3121 agttggtgca ccagcgccag cagttccctc tcggaaaccg tcgccgggag gaaatgctcg
     3181 aaggatttga tgccgacttc cttgcaggcc ttttccttat tgcgcacata aatatgcgac
     3241 gccggatcgt cgccgaccaa caccaccgcc aacccgggcg ccatgctcca gcgccgctcc
     3301 aagccttcaa cgtcttcctt gatttgctgt tgcacttctt tggcgacggc tttgccgtcg
     3361 atgatagtcg ccatgaatgg accccgcggt ttctgcggaa actatatcga aatgaaaaac
     3421 ccagtaaatg actaactgag catttggatg acatggagaa ttggaaaggt caacagcaag
     3481 acggccgatt ttaccgggag atactcaaac aaagttatgg cctggatagg agactgcaca
     3541 gcgcgggatc gaccaaggcg attgacctga accgcgtttg cgcattagat agagtcaaag
     3601 gaagttttta tgagcgcacc gagaaccatt gaagaagtaa aaaaagatat ccgcgatcgg
     3661 gtcggccacc gggcaccgtt tctccacgcc gataaagccg agtcggaaca ggcgctggcc
     3721 aggatggcgg acttcgaagg cgagacttgg gcagcggcgt ggaacgagct tggggcaaaa
     3781 tggcaggacc aagccatggc cgccgagaaa gccggcaatg ctgccgaagc caagtcggcc
     3841 tatttgaaat cctacggcta ctacggcatc gcgcgccatc cctttccgag cacgccgggg
     3901 aaacatcatg gctatttgaa gacccgcgag atgtttctcg ccgcgtcgaa atatttcgac
     3961 atcccggtgg agaaagtttc gatccccttc cacggccaag ccatcgtcgg ccatctgcgt
     4021 ctgccgaaac aactgccggc accgatgatc atgcactggg gcggtatcga caactggaaa
     4081 gaagagcg
//
LOCUS       DATIRS010000821         1574 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1733082, whole genome shotgun sequence.
ACCESSION   DATIRS010000821 DATIRS010000000
VERSION     DATIRS010000821.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1574
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1733082"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(22..1395)
                     /locus_tag="VLM90_10395"
     CDS             complement(22..1395)
                     /locus_tag="VLM90_10395"
                     /EC_number="6.4.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF006761.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate carboxylase subunit B"
                     /protein_id="HSQ13422.1"
                     /translation="MAGKIEIMETVLRDAHQCLIATRMRTEDMLPIAAQLDEIGYWSL
                     ETWGGATFDATLRFLKEDPWERLRKLRAAMPKTRFQMLLRGQNVVGYKNYPDDIVRAF
                     VERAAANGIDVFRIFDAMNDVRNMKTAIESALNTGKLVEGTVCYTISPVHSPDYFLRV
                     AEKLADMGVQIICLKDMAGMLAPYAAYEIIKKIKSRISLPLHLHSHCTAGLSPMNYMM
                     AIEAGADILDTAMAPFSQGSSQPATEQVVAALMDTPHDTGIDLTKLWKIADYFYGVRR
                     NYAEFESPVNNQIKTDVLISQVPGGMLSNLVAQLRQQKAEDKLEAVLAEMPHVRKDLG
                     YPPLVTPTSQIVGSRAALNVMTGKRYSVVALETRNYMMGLYGEPPGPISAEMKEKVLG
                     KKEPITVRPADLLKPGLEQARKDSAGMARSEEDVLTYALFPEIATDYFLWRDAQQEKQ
                     QTTGNAT"
BASE COUNT          298 a          455 c          465 g          356 t
ORIGIN      
        1 ggggcaaggc gcgccttgcc cctacgttgc attacccgtt gtctgttgct tttcctgctg
       61 cgcatcccgc cagagaaaat aatccgtggc aatttccggg aacagcgcat aggtcagcac
      121 gtcctcttcg ctgcgcgcca tgccggcgga gtctttgcgc gcctgttcga gtcccggctt
      181 aagcagatcg gctggacgaa ccgtaatagg ttctttcttg ccgagaacct tctctttcat
      241 ttccgcgctg atcggtccgg gcggttcgcc gtaaagcccc atcatgtagt tgcgcgtctc
      301 cagggccacc acggaatagc gcttgccggt catgacgttg agcgccgccc gcgagccgac
      361 gatctgactg gtgggggtta ccagcggcgg atatccgaga tctttgcgca cgtggggcat
      421 ttcggccaac accgcttcga gcttgtcttc ggccttctgc tggcgcaact gcgctaccag
      481 gttggagagc atgccgccgg ggacctgcga gatcaggaca tcggtcttga tctggttgtt
      541 gaccgggctt tcgaactccg cgtagttgcg ccgcacgcca taaaaataat cggcgatctt
      601 ccagagttta gtgagatcga tgccggtatc gtggggtgta tccatgagcg ccgcgaccac
      661 ttgctcggtg gccggttgcg agcttccctg cgaaaacggc gccatcgccg tatcgaggat
      721 gtcggcgccg gcttcgatcg ccatcatata attcatcggt gataggcccg cggtgcagtg
      781 cgaatgaaga tgaagcggca gagaaatacg tgacttgatt tttttgatga tctcataggc
      841 ggcgtatggc gcgagcatgc cggccatatc cttgaggcaa atgatctgca cacccatgtc
      901 ggccaacttt tccgcgacgc gcaggaaata atccggggaa tgaaccgggc tgatggtgta
      961 acaaaccgtc ccttccacca gcttgccggt gttgagcgcg ctttcgatgg ccgtcttcat
     1021 gttgcggaca tcgttcatgg cgtcgaaaat gcggaacacg tcaataccat tggcggcggc
     1081 gcgctcgacg aacgcccgca cgatatcgtc gggatagttc ttgtagccga caacgttctg
     1141 gccgcgcagg agcatctgaa aacgggtctt cggcatcgcc gcgcgcaatt tgcgcagccg
     1201 ctcccacggg tcttccttga gaaatctcaa ggtcgcgtcg aaggtcgcgc cgccccaggt
     1261 ttccagcgac cagtagccga tctcgtcgag ctgcgcggcg atcggcagca tgtcctcggt
     1321 gcgcatccgg gttgcgatca gacattggtg cgcgtcacgc aacaccgttt ccataatctc
     1381 gatcttgccc gccatgggtg ctccttttag tgagagccgg ttagggtgct gagacaagtg
     1441 gaatcgggca ccgagagact cagcacgaac ggattcgatg aaatatttcg cgccgttctc
     1501 cgtgcgccaa gaaatcgttc aaggacgaac ggcagtcatt cgacgctttc ctagtcgtaa
     1561 agctcgcttt gctt
//
LOCUS       DATIRS010000822         3107 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_355917, whole genome shotgun sequence.
ACCESSION   DATIRS010000822 DATIRS010000000
VERSION     DATIRS010000822.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3107
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_355917"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..413
                     /locus_tag="VLM90_10400"
     CDS             <1..413
                     /locus_tag="VLM90_10400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13423.1"
                     /translation="VLGDVCELARGTRQFSGAPSLIPPGTLKLQREEEIDVPFYVRFV
                     VKDRAGIVGDIGKTFGRMGVNISEIWQLRHVEEELRSLMQNYRLKQKAGEILPFVMTL
                     ERAKLRQMRRALDSIRNRDYILVDPLWFPIWSSS"
     gene            452..1672
                     /locus_tag="VLM90_10405"
     CDS             452..1672
                     /locus_tag="VLM90_10405"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: protein motif:HMM:NF003242.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cofactor-independent phosphoglycerate mutase"
                     /protein_id="HSQ13424.1"
                     /translation="MKYIILQGDGMADYPIEALGNKTPLQAARTPNMDWLARHGVYGI
                     AHVIPKGVPPGSDVGNMSIMGYDPAVYHTGRSPLEAASMGVALGPKEIAFRCNLVTVA
                     GSGAEAIMEDFTSGHISTDEAAEIIRDLERELGGAGIEFFPGVSYRHLMVWRDGMEKM
                     ATTPPHDITDQKTADYLPKGEGAECLLKLMAASQTLLAQHPINLKRKASGQRQATTIW
                     LWGQGRAPQLPPLTERFGITGGVISAVDIIHGLGVYAGLERIDVPGITGFLDTNYIGK
                     GEYGVRSLEKNDLVFIHVEATDEAGHMGDWKAKIQALEDFDEKVVGTVLKGMAQRQDY
                     RILLMPDHPTACALKTHVSEPVPFVLYSPQETRDNGPVGYNEIDALKTGVVAEQAYRL
                     MESLIEGRPTWTEI"
     gene            1657..2607
                     /gene="glpX"
                     /locus_tag="VLM90_10410"
     CDS             1657..2607
                     /gene="glpX"
                     /locus_tag="VLM90_10410"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: protein motif:HMM:TIGR00330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HSQ13425.1"
                     /translation="MDRNLALEAVRVTEAAALNCARLTGRGDEKAADQAAVDAMRKAF
                     DGLGIDGTIVIGEGERDEAPMLYIGEKVGSGGPKVDIALDPLEGTTICATGGPNALAV
                     LAMGDGGNLLHCPDTYMQKIACGPVGKGVVDIDKTPTENLHALAEAKKCKVEDLTVII
                     LSRPRHDAIIQEVRKAGARIRLIGDGDVAAAIATTKAETGIDLLLGIGGAPEGVLAAA
                     ALRCVGGEFQGRLAPRNNEEIERAKKMGVTDIRKKFSITELAAGDVMFAATGVTDGDY
                     LRGVHFFPGGATTQSVVMRSKTKTIRVIDAAHYFEHKPVY"
     gene            2741..3025
                     /locus_tag="VLM90_10415"
     CDS             2741..3025
                     /locus_tag="VLM90_10415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13426.1"
                     /translation="MAQRKKVKKSGWLTTALIYIFFPPFVWSLAFAAWLYWDSITALF
                     SADKATERTTVRTTRQLEKSEKEPAPAKRSQEKILDADRKKLEDVLKQRQ"
BASE COUNT          672 a          874 c          950 g          611 t
ORIGIN      
        1 cggtgttggg tgatgtctgc gagttggccc gcggtacgcg ccagtttagc ggcgcgccga
       61 gtttgatccc gcccggaacc ctgaagttgc aacgggaaga ggagatcgat gtgccgtttt
      121 atgtccgctt cgtggtcaaa gaccgcgccg gcatcgtcgg cgacatcggc aaaacctttg
      181 gccgcatggg cgtgaatatt tccgagatct ggcagctgcg ccatgtcgaa gaagagctgc
      241 gcagtctgat gcagaattac cggctcaaac aaaaggcggg agaaattttg cccttcgtga
      301 tgaccctcga acgcgcgaag ctgcggcaga tgcgccgggc actggactcc attcgcaatc
      361 gcgactatat cctggtggat ccgctgtggt ttccgatctg gagttcgagc taggcagcgg
      421 cagttagaaa acttaaggtg gttttgcact gatgaaatac atcatacttc aaggcgacgg
      481 catggctgac tatccgatcg aagcgctggg caacaagacg cccttgcaag cggcgcgcac
      541 gcccaacatg gactggctgg cgcggcatgg cgtttacggc atcgcccatg tcattcctaa
      601 aggtgtcccg ccaggcagcg atgtcggcaa catgagcatc atgggttacg acccggcggt
      661 ctatcacacc ggccgctcgc ccttggaggc cgccagcatg ggtgtggcgc tggggcccaa
      721 agagatcgcc tttcgttgca atctggtgac cgtcgcgggc agtggcgctg aggcgatcat
      781 ggaagatttt acttccggcc atatctccac tgatgaagcc gcggaaatta tccgcgatct
      841 ggagcgcgaa ctcggcggcg ctggcatcga gttttttccc ggcgtcagtt atcgccatct
      901 gatggtttgg cgcgatggca tggagaaaat ggcaaccacg ccgccccatg acatcaccga
      961 tcaaaaaacc gccgattatc tgcccaaggg cgagggcgcc gaatgtttgc tcaagttgat
     1021 ggcggcgtcg caaactttat tggcgcagca tccgataaac ttaaagcgca aggcctctgg
     1081 ccagcgccaa gcgacgacca tctggctctg gggtcagggg cgggcgccgc agttgccgcc
     1141 gctgaccgaa cgtttcggca ttaccggcgg cgtgatctca gctgtcgata ttattcatgg
     1201 cttgggcgtc tacgccggct tggagcgcat cgatgtgccg ggaattaccg gctttctcga
     1261 taccaattat atcggcaagg gcgagtatgg cgtgcgctcg ctggagaaaa acgacttggt
     1321 gttcatccat gtcgaggcca ccgacgaggc cggccatatg ggcgactgga aagcgaagat
     1381 tcaggcgctg gaggattttg acgaaaaggt cgtcggcacg gtgttgaaag gcatggcgca
     1441 gcgccaggac tatcgcattc tactcatgcc cgaccatccg accgcctgcg cgctcaagac
     1501 ccatgtttcc gaaccggtgc ccttcgtgtt gtattcgcct caagagacgc gcgataacgg
     1561 cccggtgggt tacaatgaaa tagatgcact caagactggc gtggtggccg aacaagctta
     1621 ccggctcatg gagtcgctga ttgaagggag accgacatgg acagaaattt agctctggaa
     1681 gcagtgcgtg tgaccgaagc ggcggcgctc aattgtgccc ggttgaccgg gcgcggcgat
     1741 gagaaagccg ccgaccaagc ggcggtggat gccatgcgca aggccttcga tgggttgggt
     1801 atcgatggca cgattgtcat tggcgagggc gaacgggacg aagcgccgat gctctatatc
     1861 ggcgagaagg tcggctccgg cggccctaaa gtcgatatcg ctctcgaccc tctggagggg
     1921 acgaccatct gcgccaccgg cggccccaac gcgctcgcgg tgctcgccat gggcgacggc
     1981 ggcaatttac ttcactgtcc cgacacctac atgcagaaga tcgcctgcgg tccggtcggc
     2041 aaaggcgtcg tcgatatcga caaaacgccg acggaaaatc tccacgccct ggcggaagct
     2101 aagaagtgca aggtcgaaga tctaacggtt atcattttat cgcggccgcg ccatgacgcg
     2161 atcattcaag aagtgcgcaa ggccggcgcg cgcattcgcc tgatcggcga cggcgacgtc
     2221 gcggcggcga tcgccaccac caaggcggag accggcatcg acttgcttct cggtatcggc
     2281 ggcgcgccgg aaggggtatt ggccgcggcg gcgctgcgtt gtgtcggcgg cgaatttcaa
     2341 ggacgcctgg cgccgcgcaa caacgaagag atcgagcgcg ccaagaaaat gggcgtgacc
     2401 gatatcagga aaaaattctc gattaccgaa ctggccgccg gcgatgtcat gttcgccgcc
     2461 accggcgtta ccgacggcga ttatctgcgc ggcgtgcact ttttccccgg cggcgcgacc
     2521 acgcaatcgg tggttatgcg ttcgaagacc aagaccattc gggtcatcga tgccgctcat
     2581 tatttcgagc ataagccggt ctattagcag agcgctcgcg atctaaaatc atggcgcaga
     2641 acaggattgt cgggcgggtg gaggcgatgg acgccgatac ccaccgtcga gaaatgatgg
     2701 gtatcgcaag gctcaaccca tcctacgtca gactaagaac atggcccaga gaaagaaggt
     2761 aaagaaatcc ggctggctca ctacagctct tatctatatt ttctttccac ccttcgtctg
     2821 gtctctcgcg tttgccgcgt ggttgtactg ggacagtatc acggcgctat tctccgccga
     2881 taaagcgaca gagcgcacca ccgtgcggac aactcgccag ctggagaaat ctgaaaaaga
     2941 gccggcgcca gccaaacgtt cccaggaaaa aattctcgac gccgaccgca agaaactcga
     3001 agatgtttta aagcagcgcc agtagccttg ccaacaaccg ttcgcgtcgg atccgtttgt
     3061 cagcgctgac tcggagtaat aattttccga acccttcgtg tccttcg
//
LOCUS       DATIRS010000823         1697 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_945979, whole genome shotgun sequence.
ACCESSION   DATIRS010000823 DATIRS010000000
VERSION     DATIRS010000823.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1697)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1697)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1697
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_945979"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1362
                     /gene="metG"
                     /locus_tag="VLM90_10420"
     CDS             <1..1362
                     /gene="metG"
                     /locus_tag="VLM90_10420"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR00398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HSQ13427.1"
                     /translation="VAAEAKVSEKEFTDRVSAAFRRIWDDCDITYDHFIRTTDAHHVG
                     FVQEVLQLVYDAGDIYFGKYGGLYCVGCERFYTEKELRDGKCPDHLIEPQLIEEENYF
                     FRMGKYQDRLREHIESHPDFIRPEGYRNEVLGMLREPIGDLCISRPKSRLTWGIGIPF
                     DQRYVTYVWFDALLNYVSALKFKGEKTFQKFWPATQHFIGKDIVKPHGVFWPTMLMAA
                     GLPLYKHLNVHGFWTVEGQKMSKSLGNTVAPLEVKAEVGMDALRYFLLRESVFGQDPD
                     FRHESLVSRYNTDLANNLGNFVSRALAMQQKYFAGIVQPLGADWPVEDRELRDKFAQT
                     EKDIDGYMNDLQFHRALESVMAALDHANRYIVQMAPFTMIKDADKQARVGAVLHQLLE
                     VVRTLARLLAPFLPDTVGELRALLALEPAALTKPWGEGFVAGHQINAPKVLFPRIDTG
                     AKK"
     gene            1377..>1697
                     /locus_tag="VLM90_10425"
     CDS             1377..>1697
                     /locus_tag="VLM90_10425"
                     /inference="COORDINATES: protein motif:HMM:NF013213.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HSQ13428.1"
                     /translation="MLIDSHAHIQGKEYAGETEAVIARAREAGVETIIAVGGAGDMSS
                     NSEAVRLAHSFANVYATVGMHPHDAKDVGADELEILKILAADTKVVAIGETGLDYYYS
                     HSPHD"
BASE COUNT          362 a          471 c          496 g          368 t
ORIGIN      
        1 gtcgctgccg aggccaaggt ctcggaaaaa gagtttaccg atcgcgtcag cgcggcgttt
       61 cgccgtatct gggacgattg cgacattacc tacgatcact tcattcgcac caccgacgcg
      121 catcatgtcg gtttcgtgca ggaggtgttg cagttggtct atgatgccgg cgatatctac
      181 ttcggcaagt atggcggact ctactgcgtc ggttgcgagc gcttttacac cgaaaaggaa
      241 ctgcgcgacg gcaagtgtcc cgaccatctc atcgaaccgc agctcatcga ggaagaaaat
      301 tattttttcc gcatgggtaa atatcaggac cggctgcgcg aacatatcga aagtcatccg
      361 gatttcatcc gccccgaagg ctaccgcaac gaagtgctcg gcatgctgcg cgagccgatc
      421 ggcgatctgt gcatctcgcg gcccaagagc cggctcactt ggggcatcgg cattccattc
      481 gaccagcgct acgttaccta tgtctggttc gacgccttgc tcaattatgt gagcgcgctc
      541 aagttcaagg gcgagaaaac gtttcaaaaa ttctggccgg cgacgcagca ttttatcggc
      601 aaggacattg tcaaacccca cggcgtgttt tggccgacca tgttgatggc ggccgggctg
      661 ccgctgtaca agcacctgaa cgttcatggt ttctggactg tcgaaggcca gaagatgtcg
      721 aagagcttgg gcaataccgt ggcgccgttg gaagtgaagg ccgaggtcgg catggatgcg
      781 ttgcgctatt tcttgctgcg tgaaagcgtc ttcggccagg atcccgactt ccgtcatgag
      841 agtttggtta gccgctataa taccgatctc gccaacaatc tcggcaactt tgtcagccgg
      901 gcgctggcca tgcagcaaaa atatttcgcc ggcatcgtcc agccgctggg cgccgattgg
      961 ccggtggaag accgcgagct gcgcgataag ttcgctcaaa ccgagaaaga catcgatggc
     1021 tacatgaacg atctgcagtt ccatcgcgcc ttggagtcgg ttatggctgc gcttgatcac
     1081 gccaaccgct acatcgttca gatggcgccg ttcacgatga tcaaggatgc cgacaaacaa
     1141 gcgcgcgtcg gggctgtgct gcatcagttg ctcgaagtgg tgcgcactct ggcgcgacta
     1201 ctggcgccgt tcttaccgga cacggtgggt gagttgcgcg ccttgctggc gcttgaaccc
     1261 gctgctttga ccaagccttg gggcgagggt ttcgtagccg gacatcagat caacgcgccg
     1321 aaggttttgt ttccgcgcat cgacaccggc gccaaaaaat agcagctttg ccaactatgt
     1381 tgatcgatag ccacgcccat attcagggca aggaatacgc cggtgagacg gaagccgtaa
     1441 tcgcccgtgc gcgtgaggcc ggggtcgaga cgattattgc cgtcggcggc gccggtgata
     1501 tgtcgagtaa cagcgaagcg gtgcggctgg cgcattcatt cgccaacgtc tacgcgaccg
     1561 tcggcatgca tccccatgac gccaaagatg ttggcgccga tgagttagaa atcctaaaaa
     1621 ttttagcggc ggataccaaa gtcgtcgcca tcggcgagac tggcttggat tactactaca
     1681 gccattcgcc ccatgac
//
LOCUS       DATIRS010000824         1548 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1831275, whole genome shotgun sequence.
ACCESSION   DATIRS010000824 DATIRS010000000
VERSION     DATIRS010000824.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1548
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1831275"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(174..>1548)
                     /locus_tag="VLM90_10430"
     CDS             complement(174..>1548)
                     /locus_tag="VLM90_10430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSQ13429.1"
                     /translation="SPIWKELKWDEGHHAEFVSPPVISALLLPDGQSIAHHQAIEPTV
                     TSINRFSTKDGEAWRNLYRRFHQLICDYLIPYYYESPQTGAAILQKLASARDGQEFRR
                     LWQMTPRQVVDELLENDVVKTLVLSQMAIPRGVGIDYGGGGIEVLKLIAGDEQPELAR
                     GGSHSIAQVLQRAYVYNGGQIRAVHHVDRILVNDDGRAVGVRLRDGREWQARLAVVSN
                     GDPYATFVEMVGEDYLPRTFVERVKDIQLDEFSYFQVHLALRAPVRYAIHEANNPAVS
                     QAMNVSFGPEKPGDLETMWQEIRAGEFPTHGCLHAICPTAFDPLQAPAGKHAASAYLP
                     VPFQLKGKQPEDWVKLKNGFLDTVVKTWRRYATNLTDENIIMKVAMEPHYMAGRWPNM
                     RRGSVWVARKISTQMGEQRPIEQISDYRTPIQGLYQFGVAMHPADAVIAGSGYNAWRV
                     IKQDLGL"
BASE COUNT          321 a          476 c          416 g          335 t
ORIGIN      
        1 cagataaccg gcgcagatca tgccgttgtg gccggcgcct atgacgatgc cgtcgtattc
       61 caatactttt gccattatat ccgctccgaa ccagcttgaa cgttttgaac tatttgaacg
      121 gcgcgtggtt caaatcgttc aaatagttca agccgttcaa aatgttaggc cccttataac
      181 ccgagatcct gcttaattac acgccacgcg ttataccccg agcccgcgat cacggcgtcg
      241 gccgggtgca tcgcgacgcc gaattgatac aatccttgga tcggcgtgcg gtagtcggag
      301 atctgttcga tggggcgctg ctcgcccatc tgggttgaaa tcttgcgcgc cacccagacc
      361 gagccgcgcc gcatgttggg ccaacgtccc gccatgtagt ggggctccat ggccactttc
      421 atgatgatgt tctcgtcggt caagttggtc gcgtaacggc gccaggtttt gaccaccgta
      481 tcgagaaagc cgttctttag tttaacccaa tcctccggct gcttgccttt caattgaaac
      541 ggcaccggca ggtaggccga cgccgcatgc ttgccggcgg gcgcttgcaa cggatcgaag
      601 gcggtcggac agattgcgtg cagacagcca tgggtgggaa actcgccggc gcgaatctct
      661 tgccacatgg tttccagatc gccgggcttc tcaggtccga aacttacatt catcgcttga
      721 ctcaccgccg ggttgttggc ttcgtggatg gcgtaacgca ccggtgcccg caatgccaaa
      781 tgcacctgga aataggaaaa ctcgtcgagc tggatatctt tcacccgttc gacaaacgtc
      841 cgcggcagat aatcctctcc caccatctcg acaaaagtcg cataaggatc gccattcgac
      901 accaccgcca agcgcgcttg ccactcgcgc ccatcgcgca gacgcacgcc taccgcccga
      961 ccgtcgtcat tgacgagaat cctgtcgaca tggtgcaccg cgcgaatttg cccaccgttg
     1021 taaacatagg cgcgctgcaa aacctgagcg atggaatgcg acccgccgcg cgctagctcc
     1081 ggctgctcgt caccggcgat cagctttaac acttcaatgc cgccaccgcc gtagtcgatg
     1141 ccgacaccgc gcggaatcgc catctgcgac agcaccaagg tcttcacgac atcgttttcc
     1201 aatagctcgt cgaccacctg gcgcggcgtc atctgccaga gccgtctaaa ttcctggccg
     1261 tctcgcgcgc tggccaattt ctgcaagatc gccgcacccg tctggggcga ctcatagtag
     1321 tagggaatta agtaatcgca gatcagctgg tgaaaccgac gatagagatt tcgccaagcc
     1381 tcaccgtcct tggtcgagaa ccggttgatc gaagtgacgg tcggttcgat ggcttgatgg
     1441 tgcgcgattg actgcccatc cgggagcaac agtgcgctta tgaccggcgg cgaaacgaat
     1501 tcagcgtggt ggccctcatc ccatttcaat tctttccaga ttggcgag
//
LOCUS       DATIRS010000825         3521 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1438056, whole genome shotgun sequence.
ACCESSION   DATIRS010000825 DATIRS010000000
VERSION     DATIRS010000825.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3521
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1438056"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..679)
                     /locus_tag="VLM90_10435"
     CDS             complement(<1..679)
                     /locus_tag="VLM90_10435"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HSQ13430.1"
                     /translation="MAQTELKRQIGLFSAVMLIAGDMIGTGIFISTGAIAETLPTPGG
                     VLLVWLFGGLLALAGALTCAELSASMPYAGGDYNYIREAYGKLMGFLSGWSSFLVTFS
                     GAIAFLAVILSGFVSFFVPLLGSQDVVFSIPLPWIPISATPGTLFSMAVVLVLSGLHC
                     LGVRQGTLTQNILTILKIGALLGIIVFGVIFGAGNMSHFDPLFDWEKIGNSSLFGAAF
                     IPVIFAYS"
     gene            792..1472
                     /locus_tag="VLM90_10440"
     CDS             792..1472
                     /locus_tag="VLM90_10440"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSQ13431.1"
                     /translation="MSNLALLAISLIAVALLPANIAAQDAVKRDSHEMHRLHKDPKAY
                     IGMLDDPKRDAYQKPHEVLTALNLKPGDVIADIGAGSGYFTFRLAHHVGAKGKVYAVD
                     VSPDMIRHINRRSRELKANNVVSVLADPDDPLLAEQSVNRFFICDVWHHVEDRTKYLS
                     LMKKMLKPRGEIVMIDFHKKELPFGPPMGMKIAREDLLKQMEGSGFRLAKEHTFLPYQ
                     YFLVFVPK"
     gene            complement(1477..2565)
                     /locus_tag="VLM90_10445"
     CDS             complement(1477..2565)
                     /locus_tag="VLM90_10445"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13432.1"
                     /translation="MADTKRRIIDADGHVAEDGAAIIAHMPAAYREKARAQHFNPFPP
                     FDHLHAGHLVDMPPGAFNRKVGPPEWLEFLDAVGVEATVLYPTAGVASSNIVNPDWAI
                     DSTRAYNDWLYGAYLQRSPRFQGLALLPQALLNPQAAADELRRAVTKLGMCGAVLPSN
                     SLHGPPLGTPTYLPIYEAANELGCCIAIHGGVHGSLGMDGLDPYAAVHAIGHPLGQMI
                     SLASIVFNGVLERFPRIRFGFLEGGVAWFLFCLERFDRSYETHVMRDPRGSYLKLQLG
                     EKVSDYISRHVKARRIFVGCEGGEPLLATAVKMLGAEPFMYSSDFPHEVNSETCRHEL
                     DELIENEELSEADKEAILHRNAVKFYNL"
     gene            2694..>3521
                     /locus_tag="VLM90_10450"
     CDS             2694..>3521
                     /locus_tag="VLM90_10450"
                     /inference="COORDINATES: protein motif:HMM:NF016228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ13433.1"
                     /translation="MKIMVVGSSGYIGRRVVQTLAEQGAQVVGFDLAAQSQAATPGMT
                     LVRGDMTHLEEIMAAIVDHGVQRLVALGYFMTPLLAPECRDLLNAARVNVIGVTNLFE
                     AARLARLQRVIFASTVGIFGYQDSYGDTPIDENTEARAPKSLYGLMKLVNNGRAERYA
                     KTFGLKIVKVHSAAVIGPGNTAFSRRMIQLPALGKPGFANWPSAEPRNIVGVTDIAGL
                     YAKIALADRVEHDTYMGTGPAPTGRALADIVKKYLPDAAIAFDEEARVPDWNFDNSRT
                     "
BASE COUNT          826 a         1085 c          964 g          646 t
ORIGIN      
        1 ccgagtaggc gaagatcacc ggtatgaagg ccgctccaaa cagactggag ttgccgatct
       61 tttcccagtc gaagagcgga tcgaagtgac tcatgttgcc tgcgccgaaa attacgccga
      121 agacgatgat gcccagcagc gcgccgatct tcaatatcgt caaaatattc tgcgtcagcg
      181 tgccctgcct gacacccagg caatgaagcc ccgacaagac caacaccacc gccatcgaga
      241 acagcgtgcc aggcgtggca ctgatgggaa tccacggcag cggtatcgaa aagacgacat
      301 cctgcgaccc tagtaaaggc acaaagaacg acacgaaacc gctcaagatc accgcgagaa
      361 acgcgatagc gccggaaaaa gtaaccagga atgaagacca gccggagaga aaccccatca
      421 gcttgccgta ggcttcgcgg atataattgt agtcgccccc ggcgtagggc atgctcgcag
      481 acaattcagc gcaagtgaga gcaccggcaa gggcgagcag tccgccaaac agccacacaa
      541 gcaacacacc gccgggggtc ggcaaggtct ccgcaattgc cccggtagag atgaagatcc
      601 cggtgccgat catatcgccg gcaatcaaca taaccgccga gaacaagccg atttgccgtt
      661 tgagttcagt ttgcgccata gcgccgaaca ttacagggaa attttcagac aggcaacgag
      721 tttctcagag ccaattggag caggcgaata atatgatagg ctctttatcg ctgagaaacg
      781 aaatgacgcc catgagcaac cttgctttac tcgcaatatc gctaatcgcc gttgccctat
      841 tgccggcgaa tatcgcggcc caggacgctg tcaagcgcga ctcccatgag atgcaccggc
      901 tgcacaagga cccgaaggca tacatcggca tgctcgacga tccgaaacgc gacgcctacc
      961 agaagccgca cgaagtgctg acagcgttga atctaaaacc gggcgacgtc atcgccgaca
     1021 tcggcgccgg ctcgggttat tttacttttc gcctggccca tcacgtcggc gccaaaggaa
     1081 aggtctatgc ggtggacgtg agcccggaca tgatccggca catcaaccgg cgcagccgcg
     1141 agctgaaggc aaacaacgtt gtctccgtcc tcgccgaccc ggacgacccg ctgttagctg
     1201 aacaatcggt caaccgcttt ttcatctgcg acgtgtggca ccatgtggaa gatcggacga
     1261 agtatctttc actcatgaag aaaatgctca aacccagagg tgaaatcgtc atgatcgact
     1321 ttcacaagaa agaactcccc ttcggcccgc cgatggggat gaaaatcgcc cgcgaggatc
     1381 tgctcaaaca aatggaaggc agcggctttc gcctcgctaa agaacatact tttctgccct
     1441 atcaatactt cctggtcttt gtgcccaagt agagtgtcat agattataaa acttgaccgc
     1501 gttacggtgc aggattgctt ccttgtcggc ttcggacaat tcttcattct cgatcaactc
     1561 atctagttcg tgtcgacagg tttcgctgtt gacctcatgg ggaaaatccg aagagtacat
     1621 gaacggctca gcgccgagca ttttaaccgc ggtggcaaga agcggctctc cgccctcgca
     1681 gccgacaaaa attcgccgcg ccttaacatg ccgacttata taatcgctga ctttctcgcc
     1741 tagctgcaac ttcagataac tgccgcgcgg atcgcgcatc acatgggtct cgtaggagcg
     1801 gtcgaagcgt tcaaggcaga agaggaacca cgccacgccg ccttcgagaa aaccaaaacg
     1861 aattcttggg aacctctcca gcacgccgtt gaacacgatc gacgccagcg aaatcatctg
     1921 gcccaacgga tggccgatgg cgtgcaccgc ggcgtacggg tcgagcccgt ccattccaag
     1981 ggaaccgtgc acgccgccgt ggatggcgat gcagcagccc agctcattcg ccgcttcgta
     2041 gatcggcaag taggtaggcg tgcccagcgg cggcccatgc aaactattgg acggcagcac
     2101 cgcgccgcac atgccgagtt tcgtcaccgc gcggcgcagt tcatcggccg ccgcctgggg
     2161 attcaatagc gcctgcggca acagcgccag gccctgaaag cgcgggctcc gctgcagata
     2221 ggcgccataa agccagtcat tataggcgcg cgtcgagtcg atcgcccaat cgggattgac
     2281 gatattcgac gacgccacgc cggccgtcgg gtaaagcacg gtcgcttcaa cgccgactgc
     2341 gtccaagaac tccagccatt caggcgggcc gactttgcga ttgaaggcgc cgggcggcat
     2401 gtccaccaaa tgtcccgcgt gcagatgatc gaacggcggg aaagggttga agtgttgggc
     2461 gcgcgccttc tcgcgataag ccgccggcat atgcgcgatg atcgccgcgc catcctcggc
     2521 aacatgccca tcggcgtcga tgatccgtct tttcgtatcc gccattgcat gcctcctttc
     2581 gctgccccga ttgtccatta gcaaattcac cgtccgcgga gcaatcgatt tctaattgcg
     2641 tcccagccgc ccaccgtcgt atacaacggc gtgaaacaaa gggaggcaac gccatgaaaa
     2701 ttatggtcgt cggcagcagc ggctacatcg gccggcgcgt ggtgcaaacc ttggccgagc
     2761 aaggcgctca ggtcgttggc ttcgacttgg cggcacagtc gcaagcggcg acgcctggaa
     2821 tgaccttagt cagaggcgac atgacgcacc tggaagaaat catggcggca atcgtcgatc
     2881 acggcgtcca acgtctcgtc gccctcggtt atttcatgac tcccttgctg gcgcccgaat
     2941 gccgcgatct cctcaacgcc gcccgcgtca acgtcatcgg cgtgacgaat ttgtttgaag
     3001 ccgcccgtct cgcgcgcctc caacgcgtca tcttcgccag caccgtggga attttcggct
     3061 accaagacag ctatggtgac acaccgatcg atgaaaacac cgaagcgcgc gcgcccaaga
     3121 gcctctatgg tttaatgaag ctcgtcaaca atggccgcgc cgagcgttac gcgaaaactt
     3181 ttggccttaa gatcgtcaaa gttcactcgg cggcggtcat cggtcccggc aacacggcgt
     3241 tctcgcgccg gatgattcaa ctgccggcgc tgggtaaacc gggcttcgcc aactggcctt
     3301 ccgccgagcc ccgcaacatc gtcggcgtca ccgacatcgc cgggctttac gctaagatcg
     3361 ctctcgcaga ccgggtagag cacgacacct acatgggcac ggggccggcg cccaccggcc
     3421 gcgccctcgc cgatatcgtc aaaaaatatc ttcccgatgc ggcgatcgcg ttcgatgagg
     3481 aagcccgcgt cccggactgg aacttcgaca actcgcgcac g
//
LOCUS       DATIRS010000826         2008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1634575, whole genome shotgun sequence.
ACCESSION   DATIRS010000826 DATIRS010000000
VERSION     DATIRS010000826.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2008
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1634575"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            79..1110
                     /locus_tag="VLM90_10455"
     CDS             79..1110
                     /locus_tag="VLM90_10455"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13434.1"
                     /translation="MISNISCGLPYEERRPFDPLPGENYESSPGTGSPEQRFREQDQD
                     GVDAEVLFPGNVGPGFWRGIRNDDVYKSVVRAYNDWLAEEYCSFSPERLIGVGVIPIT
                     NIGDAVAELQHCKRIGLKAVAIDNFPAGNRQPTAADDPFWAAVVDLQMALTIHVEFGF
                     PRRGRGQPAVAAPSFKYAKQTDPEHHVPDVIERFNKYGFRGSKQVVQMIWGGVFDRFP
                     KLNIYVAEVQIGWVPNWLDQMDNEYGRQQYWAERVLGLPRLKRMPSEYGREYVHWGFN
                     RNPIGVRIARQELGVDKVMWANDFPHLESDWPNSRRVLAENFAGAGEDEIWKMTVGTA
                     VKYFHLADG"
     gene            1247..>2008
                     /locus_tag="VLM90_10460"
     CDS             1247..>2008
                     /locus_tag="VLM90_10460"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSQ13435.1"
                     /translation="MTTAQTNDLKNLDEELAKDNLRGLWAREESIRREPAPFGKPILW
                     KWAKILAGLEAAGQLITTNYKGARRAISLVHPNMNESTSHTLNLAVQLVKAGEAIYSH
                     RHTNAAMRFVIDGGANVYTITNGEKCVMERGDLVIQPSWGWHNHVNETERDAIWIDGL
                     DSGLMRMLRTMFQEPHPAEDVRLYNSPVDTTLRNPGLLAPPGQPLKSLVYKWNESRRA
                     LAERLADSASPFDGRCLEYRNPVTGGATFPTFSCWI"
BASE COUNT          413 a          593 c          600 g          402 t
ORIGIN      
        1 cgcgaccgcg cgcctaaggt gattactctc gaagacggtt ctttggcggt gctgcaagaa
       61 ggccagccgt tgtagcgttt gatctccaac atctcctgcg gtctgcccta tgaagaacgg
      121 cgccccttcg atccgctgcc cggtgaaaat tatgaaagct cccccggcac cggctcgccc
      181 gagcagcgtt ttcgtgagca ggaccaggat ggtgtcgacg ccgaagtgtt gtttcccggc
      241 aacgtcggtc ccggcttctg gcgcggcatt cgcaacgacg atgtttacaa gtcggtagtg
      301 cgcgcctaca acgattggct cgccgaggaa tattgctctt tttcccctga gcgcttgatc
      361 ggcgtcggcg tgattccgat caccaatatc ggcgatgccg tcgccgagct gcagcactgc
      421 aagcgcatcg gtctcaaggc ggtggcgatc gacaactttc ccgccggcaa ccgccaaccg
      481 acggcggcgg acgatccgtt ctgggccgcg gtggtcgatt tacaaatggc cttgacgatt
      541 cacgtcgagt tcggttttcc gcggcgcggc cgcggccagc cggcggtggc ggcgccctca
      601 ttcaagtacg ccaaacagac cgatcctgaa caccatgtgc cggacgtgat cgagcgattc
      661 aacaaatatg gttttcgcgg cagcaaacaa gttgtccaga tgatctgggg cggcgtgttc
      721 gatcgtttcc cgaagctgaa tatttatgtt gccgaagtgc agatcggctg ggtgcccaat
      781 tggctcgacc agatggacaa tgaatatggc cgccagcaat attgggccga gcgcgtgctc
      841 ggtttgccgc gtctgaaacg catgcccagt gagtatggcc gtgaatatgt ccactggggt
      901 ttcaatcgta atcccatcgg cgtgcgcatc gcgcgccagg agttgggtgt ggacaaagtg
      961 atgtgggcca acgactttcc tcacctcgaa tcggactggc ccaactcgcg ccgcgtgctc
     1021 gcggaaaact tcgccggcgc cggcgaagac gaaatctgga aaatgaccgt gggcaccgcg
     1081 gtaaagtatt ttcacttggc cgatggctaa agcagatttc tccctgcggt cgaaatgacc
     1141 caacaaccgg cgcgccgcct gcattgttct gtcatcccga gtgaatgcga gggatctaga
     1201 ttttttccca gaggtcggta gtggcggctg accaaggagc gatttcgtga ctacagcgca
     1261 aaccaacgat ctgaaaaatc tcgacgaaga actggcgaag gataatctgc gcggcctgtg
     1321 ggcgcgcgag gaatcgattc ggcgcgagcc ggcgcccttc ggcaagccga ttctttggaa
     1381 gtgggccaag attctcgccg gtctcgaagc tgccgggcaa ctgatcacga ccaactataa
     1441 aggcgcgcgc cgggccatca gtctagttca tccgaacatg aacgaaagca ccagccatac
     1501 gctcaacctg gcggtgcagc tggtcaaagc cggcgaagcg atctattccc atcgccatac
     1561 caacgccgcc atgcgcttcg tcatcgacgg cggcgccaac gtctacacga tcaccaacgg
     1621 cgagaagtgt gtcatggagc gcggcgattt agtgattcag ccgagctggg gttggcataa
     1681 tcacgtcaat gaaaccgaac gcgacgccat ctggatcgac ggcctggatt cgggcctgat
     1741 gcgcatgttg cggacgatgt ttcaggaacc ccatccggcc gaagatgtgc ggctgtacaa
     1801 cagcccggtg gataccacgc tgcgcaatcc cggcttgctc gcgccgcccg gacaaccgtt
     1861 gaaatcgctg gtctacaaat ggaacgagag ccggcgcgcg ctggcggaaa ggctcgccga
     1921 cagcgccagc ccattcgacg gccgctgtct ggagtatcgc aatccggtca ccggcggtgc
     1981 cactttcccg actttttcct gttggatc
//
LOCUS       DATIRS010000827         1641 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_552333, whole genome shotgun sequence.
ACCESSION   DATIRS010000827 DATIRS010000000
VERSION     DATIRS010000827.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1641
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_552333"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..668)
                     /locus_tag="VLM90_10465"
     CDS             complement(<1..668)
                     /locus_tag="VLM90_10465"
                     /inference="COORDINATES: protein motif:HMM:NF013109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HSQ13436.1"
                     /translation="MDRDARSKFASPLSITMMTENTVSVTDEKPQNGLAGFKYWRFDL
                     TAGLQVALVSLPLSLGIAIASGAPPVTGLISAIIAGFVYPILGGSYVTIAGPAAGLAP
                     ALLSGMLTLGNGDLAAGYPLLLVAICLTGLVQILLTVFKVGEFARIIPIPVMEGMLAA
                     IGLIIIVKQIPLLLGDLTPPGKSIPLAILSLPASLWAANFEICIIGVISVVLMFWLSR
                     ARIR"
     gene            867..1361
                     /gene="purE"
                     /locus_tag="VLM90_10470"
     CDS             867..1361
                     /gene="purE"
                     /locus_tag="VLM90_10470"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR01162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HSQ13437.1"
                     /translation="MAQSISPVVSVIMGSQSDWDTMQHASATLKDFAVEHECLIVSAH
                     RTPAWLTEFAGGAEGRGIETIIAGAGGAAHLPGMTAAQTLVPVLGVPVESAALNGMDS
                     LLSIVQMPGGIPVGTMAIGKAGAINAALLAIAILANSRPELREKLRQFRANQTAAVRQ
                     QKLP"
     gene            1370..>1641
                     /locus_tag="VLM90_10475"
     CDS             1370..>1641
                     /locus_tag="VLM90_10475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13438.1"
                     /translation="MKAILPGAAIGVLGSGQLGRMFAIAARQMGYRVHTFSSETDTPT
                     GQVADVEIAASYDDLATVRRFAQAVQVVTFEFENVPAACVEAAAAFV"
BASE COUNT          367 a          484 c          478 g          312 t
ORIGIN      
        1 cagcgaatcc gcgcacggct cagccaaaac atcaaaacca ctgagataac accgattata
       61 caaatctcga agtttgctgc ccacaaactc gccggcaagc tgaggatcgc taacgggatc
      121 gacttgccgg gcggggtcag gtcacccagc agcagcggaa tttgcttgac gataataatt
      181 aaaccgatgg cggctaacat gccttccatg accgggatcg ggatgattct ggcgaattcg
      241 ccgaccttga aaacagtcag cagtatttgc accagtcccg tcaggcagat cgcgaccagc
      301 agcagcgggt aaccggctgc cagatcgcca ttgcctaagg tgagcatgcc ggacagcaac
      361 gccggcgcca gtccagcggc gggaccggca atcgtgacat aagagccgcc caaaatcgga
      421 taaacgaagc cagcgataat cgccgagatc agtcccgtaa ccggcggtgc gccagaagct
      481 atggcgatgc cgagcgagag cggcaacgaa accaaagcga cctgcaaacc cgccgtcagg
      541 tcgaagcgcc aatacttgaa acctgccaat ccgttttgcg gcttttcgtc ggtaaccgac
      601 acggtgtttt cggtcatcat tgttatactg agtggagaag caaacttgct tcgcgcatcc
      661 cggtccatca caaaacttcg gattggatag cagtgaactt aagagaatgc aatcgatgtc
      721 gacgctgttt gccgtgcgct gtacccgccc aacgtccgcg cttggccaag ggacgaaaat
      781 gccggcgcat tgattgactt atgctttgct ctgtaagagg gtttaagagt tatcaccaac
      841 accatcgcgg caaggaaagc agtttcatgg cacaatcgat atcacccgtt gtcagcgtca
      901 tcatgggcag ccaatcggat tgggacacca tgcagcatgc gtcggcgacg ctcaaagact
      961 tcgccgttga gcatgaatgt ctgatcgtct cggcccatcg gacgccggca tggctcacgg
     1021 agtttgccgg cggcgctgag gggcgcggca tcgaaacgat catcgccggc gccggcggcg
     1081 ctgcgcatct gccgggcatg acggcggcgc agactctggt tcccgtgctc ggtgtgccgg
     1141 tggaaagtgc cgcgctcaac ggcatggatt cgctgttatc gattgtccaa atgccgggcg
     1201 gcattccagt cggaacgatg gcgatcggca aagccggcgc gattaacgca gcactgctgg
     1261 ccattgcgat cctcgccaat tcacggcctg agctgcgcga gaaactgcgc cagttccgcg
     1321 ccaatcagac cgctgccgtg cgccagcaga agttgccgtg agcagcagag tgaaagccat
     1381 acttcccggc gcggctatcg gcgttcttgg cagcggccaa ttgggtcgca tgttcgccat
     1441 cgcggcgcgc cagatgggct accgcgtcca caccttttca tctgaaaccg acacaccgac
     1501 agggcaggta gccgatgtcg agatcgccgc ctcctatgac gatctcgcta cggtgcgccg
     1561 gtttgcccag gcggttcaag tggtgacttt cgaattcgaa aacgtccctg cggcctgtgt
     1621 cgaggcggct gccgctttcg t
//
LOCUS       DATIRS010000828         2493 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1634704, whole genome shotgun sequence.
ACCESSION   DATIRS010000828 DATIRS010000000
VERSION     DATIRS010000828.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2493)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2493)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2493
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1634704"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..187
                     /locus_tag="VLM90_10480"
     CDS             <1..187
                     /locus_tag="VLM90_10480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13439.1"
                     /translation="SYILVLTAMTFTPVSYVAPAREISILIGTALGARLLAEGDAPRR
                     LAAAGAMVLGIVGLAIG"
     gene            242..574
                     /locus_tag="VLM90_10485"
     CDS             242..574
                     /locus_tag="VLM90_10485"
                     /inference="COORDINATES: protein motif:HMM:NF016854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family protein"
                     /protein_id="HSQ13440.1"
                     /translation="MNKKDESFKDFMLDQLRELDDVEARRMFGGHGLYQDETFFGIIH
                     KGKLFFKIDESTVGDYRRRKMKPFRPSAKQTLVSYYQVPVEIIEDADALRQWAEQAVM
                     CQVKKRRG"
     gene            complement(579..971)
                     /locus_tag="VLM90_10490"
     CDS             complement(579..971)
                     /locus_tag="VLM90_10490"
                     /inference="COORDINATES: protein motif:HMM:NF017935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF983 domain-containing protein"
                     /protein_id="HSQ13441.1"
                     /translation="MAVSIFTMLGHGLRLRCPRCGIGRLYGKPFRMNDNCAHCGLKFE
                     REQGYFIGAIYINYAATIAIAVPGFFLLDAFTGIDINQQLTFWIPFAVIFPLLFFHHS
                     RSLWLVLDHIFNPEKQLFSVPPKKTPNP"
     gene            complement(973..>2493)
                     /gene="uvrA"
                     /locus_tag="VLM90_10495"
     CDS             complement(973..>2493)
                     /gene="uvrA"
                     /locus_tag="VLM90_10495"
                     /inference="COORDINATES: protein motif:HMM:TIGR00630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HSQ13442.1"
                     /translation="RDRAVSEKVLKEIQQRLNFLSEVGLPYLTLDRRADTLSGGEAQR
                     IRLAAQLGSNLRGVCYILDEPTIGLHPRDNAMLLKTLRRLEQLGNSVLVVEHDEATIQ
                     SADLIIDLGPGAGVHGGNVVYIGTPAEIRANPDSPTGAYLRSERKRLGPKRELKKSNW
                     LTICGAKAHNLKNLDVKIPLGKWSCITGISGSGKSTLVRDVLYKGVKLLLGQFAGRPG
                     QFKEITGWKAIERIVEVDQTPIGKTPRSVPASYIGVLDEIRKLYALAPEARLRGYTAS
                     RFSFNVKGGRCEDCAGQGKIRKEMSFLPDVFIDCDTCNGQRFNEETLSIRYNEKNIFE
                     VFCLTVEEAVPFFHAFPKINRPLKILDDIGMGYINLGQASNTLSGGEAQRIKLAYELG
                     KESRGTTLYVLDEPTTGLHFVDVEKLIHILHRLVDMGNTVVTIEHNLDIVKDADYLVD
                     LGPEGGAQGGQLVACGAPLDVIKDGKKSYTARFLREYLNGGAAPVAKKPARARASV"
BASE COUNT          502 a          655 c          791 g          545 t
ORIGIN      
        1 atcctatatc ctcgtgctca ccgccatgac ttttacgccg gtgagttacg tcgcgccggc
       61 acgtgagatc agcatcctta tcggcacggc gctgggcgcg cgcttgctcg ccgaaggcga
      121 tgcgccacgc cggctcgccg ctgccggcgc gatggtgttg gggattgtcg gattggccat
      181 cggataagtt cgttcaaaac gttcaaatag ttcaagtcgt tcaaaacgtc ttcggatcgc
      241 catgaataag aaggatgaat cgttcaaaga ttttatgctc gatcaattgc gcgaacttga
      301 cgatgtcgag gcgcggcgga tgttcggcgg gcatggcttg tatcaggacg agactttctt
      361 cggcatcatt cacaagggta agctgttctt caagatcgat gagtctactg tcggcgatta
      421 ccgcaggcgc aagatgaaac cgtttcgccc cagcgccaag cagacgctcg tgagttatta
      481 ccaggtgccg gtggagatca tcgaagatgc ggatgcgttg cgacagtggg ccgagcaggc
      541 ggtgatgtgc caggtgaaga agcgtagggg atgaagggtt aggggttagg cgttttcttt
      601 ggaggaacac tgaacagctg cttttccggg ttgaagatat ggtccagcac cagccacaaa
      661 cttcttgaat gatgaaaaaa cagcagcggg aagatcaccg cgaaggggat ccagaaggtg
      721 agctgttggt tgatgtcgat accggtgaag gcgtcgagga gaaagaagcc gggcacggcg
      781 atggcgatgg tggcggcgta attaatataa atggcgccga tgaagtagcc ctgttcgcgc
      841 tcaaatttta gtccacagtg ggcgcagttg tcattcatcc taaacggctt gccatacaag
      901 cggccgatgc cgcagcgcgg gcagcgcagg cgcaggccgt ggccgagcat ggtgaagatt
      961 gacacggcca ctttaaacgc tcgcgcgggc tcgggcgggt ttctttgcca ccggggcggc
     1021 accgccattg agatattcgc gcaggaagcg cgccgtgtaa gatttcttgc cgtctttgat
     1081 cacgtccaac ggcgcgccgc aggcgactaa ctggccccct tgggcgccgc cttcggggcc
     1141 cagatcgacc aggtagtcgg cgtctttgac gatgtcgagg ttatgctcga tggtgaccac
     1201 cgtgttgccc atgtcgacca ggcgatggag gatatgaatc agcttctcca cgtcgacgaa
     1261 atgcagcccg gtggtcggtt cgtcgagcac gtaaagcgtc gtgccgcggg attccttgcc
     1321 gagctcgtag gcgagtttga tgcgctgggc ttcgccgccg gaaagcgtgt tgctcgcctg
     1381 gccgagattg atatagccca tgccgatgtc gtcgaggatc tttagcggcc ggttgatttt
     1441 cggaaaggcg tgaaaaaacg gcacggcctc ttccaccgtc aggcaaaaca cctcgaagat
     1501 atttttttca ttataacgaa tgctgagggt ttcctcgttg aaacgctggc cgttgcaggt
     1561 atcgcagtcg atgaatacat cgggaagaaa actcatctcc ttgcgaatct tgccctgtcc
     1621 ggcgcagtct tcgcagcggc cgcccttgac gttgaaggag aaacggctgg ccgtgtaacc
     1681 gcgcagacgc gcttccggcg ccagcgcata gagcttgcga atctcatcca acacaccgat
     1741 gtaggaggcc ggtacggagc gaggggtctt gccaatggga gtttgatcga cctcgacgat
     1801 ccgttcgatc gccttccagc cagtaatttc tttaaattgt ccgggtcgtc cggcgaactg
     1861 gccgagcagg agtttgacgc ccttgtaaag cacgtctctg accagcgtgc ttttgcccga
     1921 gccggagatg ccggtgatgc agctccactt gcccaaggga atttttacgt cgaggttttt
     1981 caaattatgc gccttggcgc cacagatggt gagccagttg gatttcttca gctcgcgctt
     2041 ggggccgaga cgtttgcgct cggagcgcag gtaggcgccg gtgggcgagt cgggattggc
     2101 tctgatttcc gccggcgtgc cgatgtaaac cacgttgccg ccatggacgc cggcgccggg
     2161 gccgagatcg atgatcagat ccgccgattg aatggtcgct tcgtcatgtt cgacgacgag
     2221 cacgctgttg cccagctgtt cgagccggcg cagggttttg agcagcatgg cattatcgcg
     2281 cggatgcagg ccgatggtcg gttcgtcgag gatgtaacag acgccgcgca ggttggaacc
     2341 cagctgcgcc gccaggcgaa tgcgttgagc ctcgccgccg gagagcgtat cggcgcgccg
     2401 gtcgagggtt aaatatggca gaccgacttc cgataggaag ttcaagcgct gctggatttc
     2461 cttcaatact ttctcggaca cggcgcggtc gcg
//
LOCUS       DATIRS010000829         2744 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_356262, whole genome shotgun sequence.
ACCESSION   DATIRS010000829 DATIRS010000000
VERSION     DATIRS010000829.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2744
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_356262"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..780
                     /locus_tag="VLM90_10500"
     CDS             <1..780
                     /locus_tag="VLM90_10500"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HSQ13443.1"
                     /translation="DWNVSARLQTPYVRVYNEDREVTAWFLLDMSPSVEFGAQVKKRS
                     VSTEFVTVLARLLTRHGNRVGALFYGDSVDTVIPARSGRRHALHILHSIVSRPEPARS
                     AATNLSDFLQTALRVMQRRSLVFVVSDFISAPGWAKPLAYLAQRHEIIAVRLYDPLEM
                     ELPDLGLVTMRDAETGEQLFVDTHDRAFRKRFAALAEQRENELRSALTHAGVDALELS
                     TNDDLVDAILRFADLRKRHSQLAAGGGLPQHLRRSHEVSLA"
     gene            761..1804
                     /locus_tag="VLM90_10505"
     CDS             761..1804
                     /locus_tag="VLM90_10505"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HSQ13444.1"
                     /translation="MKFLWPEMLWLLVLVPALVAGYFYLLRRKRQTALKYANLSMVKE
                     AMGAGQRFRRHMPPLLFLLALIAMLVAVARPAAVITLPSQHRTIILAMDVSGSMRAVD
                     VQPNRLSASQAAAKAFVAEQPSNVRIGVVSFAGTAAVVQMPTHNRDDIIGAIDRFQLQ
                     RGTAIGSGIIVALATLFPDAGIDVSSLMYGRYPPRGASLDQAGKSEKKEFKPVPPGSY
                     NSAAIILLTDGQRTTGPDSLEAARMAADRGVRVFTVGFGTKGGETIGFEGWSMRVRLD
                     EDTLKAIADVTRGQYFYAGTATDLKKVYESLNSKFLLEKKDMEISALFAAAAAVIALV
                     SALLSLLWFNRVL"
     gene            complement(1887..2372)
                     /locus_tag="VLM90_10510"
     CDS             complement(1887..2372)
                     /locus_tag="VLM90_10510"
                     /inference="COORDINATES: protein motif:HMM:NF017913.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate-starvation-inducible PsiE family
                     protein"
                     /protein_id="HSQ13445.1"
                     /translation="MTNGKKRPSDFKEWLTLSFGYAEDVVYVGLGLLLMAIALSLLVT
                     EMVYFGNYLLTRTLTDNVVFLLDRILLIIIFVEVMYTVQVSFRQHVLQPEPFLVVGLI
                     AVTRRILVLTAEMPKLAKESQEGFYNSMIELGLLTVLIITLVLCLHILRRREQSKGER
                     S"
BASE COUNT          572 a          824 c          763 g          585 t
ORIGIN      
        1 gactggaatg tgagcgcccg tctgcaaacg ccctacgtac gggtttacaa cgaagaccgc
       61 gaagtgacgg cgtggtttct gctcgacatg agcccgtcag tggagttcgg tgcgcaggtg
      121 aagaaacgtt ccgtgtcgac cgagttcgtc accgtgctgg cgcgcctttt gacgcgtcac
      181 ggcaatcgcg tcggcgcgct gttctacggc gacagcgtag atacggtgat tccagcgcgc
      241 agcggccggc gtcatgcgct gcatattttg cacagcatcg tttcccggcc cgagcctgcg
      301 cgctcggcgg cgaccaacct gagcgatttt ctccagaccg cgcttcgtgt catgcaacgg
      361 cggtcgctgg ttttcgtcgt ctccgatttt atcagtgcgc ccggctgggc caagccgctc
      421 gcctacctag cgcagcgcca cgagatcatc gccgtgcggc tctacgatcc gttggagatg
      481 gagttgcccg atctcggtct ggtcacgatg cgcgacgccg agaccggcga acaattgttc
      541 gtcgacaccc acgatcgcgc ctttcgcaag cgcttcgccg ctttggccga gcagcgcgag
      601 aacgagctgc gctcggcgtt aacccacgcc ggcgtcgacg ctctggagtt gtccaccaac
      661 gatgacttgg tggacgcgat tttgcgtttc gccgacctgc gtaagcggca cagccagttg
      721 gccgcgggcg gcggtctgcc gcagcattta agaaggagcc atgaagtttc tctggcctga
      781 gatgctctgg ctgctagtgc tcgtgccggc gctcgtggct ggatattttt atttattgcg
      841 ccgcaagcgg cagaccgcgc ttaagtatgc gaacttgagc atggtgaaag aagcgatggg
      901 cgcgggccag agattccgcc gccacatgcc gccgctgcta tttctgcttg cgctgatcgc
      961 gatgctcgtc gccgtcgccc gtcccgccgc cgtgatcact ttgccgtcgc aacaccgcac
     1021 catcatcctg gccatggacg tatccggcag catgcgcgct gtcgacgtac agcctaatcg
     1081 gctctccgcg tctcaggccg ccgccaaggc gtttgtcgcc gagcagccgt ccaacgtgcg
     1141 catcggcgtg gtttccttcg ccggcacggc ggcggtcgta cagatgccga cgcacaaccg
     1201 cgacgacatc attggcgcca tcgaccgctt ccaactgcag cgcggcaccg ctattggcag
     1261 cggcatcatc gtcgctctcg caactctctt ccccgacgcc ggcatcgacg taagctcttt
     1321 gatgtacgga cgctacccgc cccgcggtgc atccctcgat caggccggca aatccgagaa
     1381 gaaagagttc aagccggtcc cgcccggttc ttacaattcc gccgcgatca ttctgctcac
     1441 cgacggccag cggacgacgg gccccgattc cctggaagcg gcgcgcatgg ccgccgaccg
     1501 cggcgtgcgc gtcttcaccg tgggattcgg tacgaaaggt ggagagacca tcggcttcga
     1561 aggctggtcc atgcgcgtgc gcctcgatga agacacgctc aaagcgatag ccgacgtgac
     1621 ccgcggccaa tatttttacg ccggcacggc gaccgatctg aaaaaagtct acgagtccct
     1681 caactccaag tttttgctgg aaaagaagga catggaaatc agcgccctat ttgccgccgc
     1741 cgccgcggta atcgcgctgg tctcggcgct gctttcactc ctgtggttca atcgggtcct
     1801 gtaaattaaa gcgcccgcca tctttattct gcgtcaattc agtttgaatt cattgcgccg
     1861 cggctgagtc ttgccacggt atcgctttag gaccgttctc ctttagattg ttcccgccgc
     1921 cgtagaatgt gcaaacacag cactaatgta ataatcagca ccgtcaacag tccgagttcg
     1981 atcatcgaat tgtaaaaacc ctcctgactt tccttggcca acttcggcat ttccgccgtc
     2041 aatacgagaa tacgacgggt taccgcaatc agtccgacca ctaaaaatgg ctccggctgc
     2101 aaaacatgct ggcgaaagga aacttggacg gtatacatca cttctacgaa tatgatgatc
     2161 aggagaattc ggtcgagaag aaagacgacg ttatccgtca acgttcgcgt caacagataa
     2221 ttcccgaagt aaaccatctc ggtgaccagc aagctcagtg cgatcgccat aagcagcaag
     2281 ccaagtccaa cgtaaacgac gtcttctgcg tagccaaacg agagcgtgag ccattctttg
     2341 aagtcactgg gccgcttttt accgttggtc atcggttaga cctccagagg attaaagtcg
     2401 atcaggatct tgccatagac cacatcgtac cggcatttgg ttttgcgtca agcgacggtg
     2461 gagaagatac agcgatgatg gagtgatctc gctggaatta gggacctccg tatcttgagc
     2521 tcgctattct acaatgattg aatgttcgca gcagggcatc gctgttgtgg cagctagaaa
     2581 cgattggaac caaaaataac ccacaaggga ggctctaatg gacgatcata tttataagca
     2641 ggtcgaattg acgggttcgt cccgaactac catcgaggac gccgttcaaa acgccatcag
     2701 caaggctggc aagacactcc acaatattca ctggttccaa gtgg
//
LOCUS       DATIRS010000830         2385 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_750210, whole genome shotgun sequence.
ACCESSION   DATIRS010000830 DATIRS010000000
VERSION     DATIRS010000830.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2385)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2385)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2385
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_750210"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1756)
                     /locus_tag="VLM90_10515"
     CDS             complement(<1..1756)
                     /locus_tag="VLM90_10515"
                     /inference="COORDINATES: protein motif:HMM:NF015557.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HSQ13446.1"
                     /translation="MSGQQESNADLASGHYESPAVVMLSGKKFLFGCAVVAAALLLAG
                     RMTALPVGLLAGEVFATILGLFLFGSFRYQIHKNALTYGMLLIIVATFCGLASSPWHQ
                     EITAQGWWSWARQHLLSFHGLDDLIHADTMLFILGLTFFVAVIAQTRLLEGLTFSLLR
                     RFRGAVLPTVVSVTAVVAFSSGILDGVSMIGLTIRTLVIIMLLAAAPTAAIRYAVMVC
                     TTVTTICGIWLAYGEPPNLIMKANLHPYLDNAFFLRYCAPAAIASYLVIAWELRKRLR
                     GEQIDLESMDVIDANAEDVRFLQATRHGEVLTPVELIESHESELGERTEAVIERLRRG
                     ESLGIALAREDVAEALRKKLLGHFVSEDLADALDRHYALDAAGDHAGALTAERAVDEA
                     IAASARRRRLAQKVGALALVPFVGMLIWHGIDHSVPLFFASFAGFLVALLGIFNIPKM
                     RALALREAKHEYAEYYFLFPLFLSITLLTKAGFFDQLQALMHYGIRSLGVAHVAFAQF
                     VGCTFLSAILDNNVVADFASRALHGLDISVLHLFAMAQIAGYAIGGCWTHIGSAQSVV
                     AYAFIQRDVDETYTPVQWI"
     gene            complement(1982..>2385)
                     /gene="msrA"
                     /locus_tag="VLM90_10520"
     CDS             complement(1982..>2385)
                     /gene="msrA"
                     /locus_tag="VLM90_10520"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: protein motif:HMM:NF013766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HSQ13447.1"
                     /translation="SSGHAEVIKIEFDPSQISFRDLMTVFFATHDPTTLNRQGNDAGT
                     QYRSAIFYANEDQKQQAAALIKELDDAKTFRNPVVTTLEPLTEFYSAEDYHQKFYANN
                     PYQPYCQYSIPPKLNKLHKQFSQLLKSHAKA"
BASE COUNT          591 a          711 c          663 g          420 t
ORIGIN      
        1 tgatccattg caccggcgtg taagtctcgt cgacatcgcg ctggatgaaa gcgtaggcga
       61 cgacggattg agccgaaccg atatgcgtcc agcagccacc aattgcatag ccggcgatct
      121 gtgccatggc gaagaggtgc agcaccgata tatcgagccc atgcagagct cgcgacgcga
      181 aatccgccac cacgttgttg tcgagaatcg ccgagagaaa agtgcagccg acaaactgcg
      241 cgaaggcgac atgagcaacg ccgagacttc gaatgccgta atgcatcagc gcctggagct
      301 gatcgaaaaa gcccgccttg gtcaacaaag tgatggaaag aaacaacgga aacagaaaat
      361 agtactcggc gtactcatgt ttagcctcgc gcaatgccag cgcgcgcatc ttgggaatat
      421 tgaatatacc caacaaagcc accaagaagc ccgcgaaaga ggcaaaaaac aagggcacgc
      481 tatgatcgat gccatgccag atgagcatgc cgacaaaagg caccagcgcc agggcgccga
      541 ccttttgcgc caaccggcgc cgccgcgccg aggcggcgat cgcctcatca accgctcgct
      601 cagcggtgag cgcgcccgcg tgatccccag cggcgtcgag cgcatagtga cgatccagcg
      661 catccgccaa gtcttcactg acaaaatggc cgagcaattt cttgcgcagc gcttcggcaa
      721 catcttcgcg cgccaacgca atgccgaggg attcgccgcg gcgcagccgc tcgatcaccg
      781 cctcggtcct ttcaccgagc tcgctttcgt ggctctcgat caactcgacc ggcgtcaaga
      841 cttcgccgtg gcgcgtcgcc tggagaaagc gcacgtcctc ggcgttagcg tcgatcacgt
      901 ccatactttc gaggtcgatc tgttcgccgc gcaagcgttt gcgcagctcc caggcgatga
      961 ccagataact cgcgatggcc gcgggcgcgc agtaacggag aaaaaaggca ttgtccagat
     1021 aggggtggag attcgctttc atgatcagat tgggcggctc gccataggcc agccagatgc
     1081 cgcaaatcgt cgtcaccgtc gtgcacacca tcaccgcgta gcggatcgcc gccgtcggcg
     1141 cggcggcgag cagcataatg atcacgagag tgcgaatcgt caggccgatc atcgaaaccc
     1201 catcgaggat ccccgaggaa aaagcgacca ccgccgtcac cgaaaccacc gtcggcaaaa
     1261 ccgcgccgcg aaagcgccgc agcagggaaa aagtcagacc ttcgagcagg cgggtctggg
     1321 cgatcaccgc gacaaaaaag gtgagaccga ggatgaacaa catcgtgtcg gcatggatta
     1381 agtcatcgag gccgtgaaac gacagcaaat gctgccgcgc ccaagaccac caaccctggg
     1441 cagtgatttc ctgatgccac ggcgaactcg ccaagccaca gaacgtcgcc acgatgatca
     1501 ataacattcc ataagtcagg gcgttcttat ggatctggta gcgaaaagaa ccgaaaagaa
     1561 acaaacccag aatagtcgca aacacttcgc cggccaaaag cccgaccggt agcgccgtca
     1621 tccggcccgc gagcaagagc gccgcagcga cgacggcgca gccgaaaaga aactttttcc
     1681 ccgacagcat gaccaccgcc gggctttcgt agtgcccgga agcgaggtcc gcgttactct
     1741 cctgttgtcc gctcacgaat caattctccc gccagaacca caaggaagat tcccgatagc
     1801 gcccggtgtc tcatgcaaaa agatcgccgt ccatacgcaa gacttttacg ggaaacatcg
     1861 acaccaaccc gcgcaatctg cccaagaaag agtcgctgcc cagaatttat gcgcgccacg
     1921 cattgcgcgc aaccaatggt ctcgtcgcac gcgaaacgtc gttttcggcc aaccagcgaa
     1981 gctatgcctt ggcgtgcgac ttgagcaact gtgaaaactg cttgtgaagc ttattgagct
     2041 tcggcgggat cgagtactga caatagggct ggtatggatt gttggcgtaa aatttttgat
     2101 ggtagtcttc ggccgagtag aattccgtca gcggctccaa cgtcgtcacg accgggttcc
     2161 taaacgtctt ggcatcgtcg agctctttga tgagcgctgc agcttgctgt ttttggtctt
     2221 cgttagcgta gaaaatcgcc gagcgatact gcgtgccggc atcgttgccc tggcgattga
     2281 gcgtcgtcgg atcgtgggtc gcgaaaaaca ccgtcatcag atcgcggaaa gaaatctgac
     2341 tcggatcgaa ttcaatttta attacttccg catgaccgga gctgc
//
LOCUS       DATIRS010000831         3651 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1143770, whole genome shotgun sequence.
ACCESSION   DATIRS010000831 DATIRS010000000
VERSION     DATIRS010000831.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3651
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1143770"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..419)
                     /locus_tag="VLM90_10525"
     CDS             complement(<1..419)
                     /locus_tag="VLM90_10525"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSQ13448.1"
                     /translation="MTTSTGIADFAIKPATKKDVPVILSFITKLADYERLSHEVVATE
                     ELLQRTLFGQRRTAEVAIGYCNNQPVGFVLFFHNFSTFLGRPGIYIEDLFVEEAFRRR
                     GFGGALLAHIAKLAVARHCGRLEWSVLDWNEPAVNFY"
     gene            complement(534..2750)
                     /locus_tag="VLM90_10530"
     CDS             complement(534..2750)
                     /locus_tag="VLM90_10530"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSQ13449.1"
                     /translation="MAKREFKFVGHSVKRVDGVEKVTGAAKFVGDITVPGMLYGKILR
                     STFPHARIRSIDASQAEALPGVIAVLTAADIADLNPIYNGRPVIAINKVRYVGEPVAA
                     VAAVDIAIAEEALALIDVDYDELPTVAGIEAAIKPGAPLVHEDKTSNIGTHEKVNRGD
                     ADEGFAQSDIIAEDNFTFPMVYHYAMEPHSAIAHYDVNDEITVWSCAQHPFQVRGDIA
                     KVFKVPTAKVRLIINYLGGGYGSKSYTKFEPLVVALARKAKQPVRICNSVGESMVTVR
                     RHGARVRIKTGVKNDGTIMAREAEIYLDTGGYDDNGPQVTARSATRILGPSWIPNIRT
                     NAYQVYTNTGSAGSYRAIGAPQVIFAGESQIEILAARLGMDPAELRAKNLLKKGQELR
                     PGLKGIDANLSASLKTLVRASHWKRSREHKNSAVGMGCAITNAGATPVSVAMIRIQSD
                     GIANIAAGSTEMGQGVRTTLTQIAAEELTLPMEQFRMLGADTKVTPYDSSTGSSRSTT
                     LMGTAVQKAARDLRRQYIQIAAQTMGVKPKQIQVVDGALVCGESRLSFKEAFEKRFGK
                     GSGGELIGRGEAGPEITDNQLPVFWEVGMGSAEVDIDRETGAVKLTKFISVADVGKAI
                     HPEHCVAQEEGAAMQGIGHTFFEQLIYDNGQLLNPNLVDYRIPSFSDVPEEFHTELVE
                     NGDGPGPFGVRGMAEGGILSVAPSVCNAIDRATGVRIRDLPLTPERVWRALKDAGK"
     gene            2872..3627
                     /gene="sfsA"
                     /locus_tag="VLM90_10535"
     CDS             2872..3627
                     /gene="sfsA"
                     /locus_tag="VLM90_10535"
                     /inference="COORDINATES: protein motif:HMM:TIGR00230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000023 - maltose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA nuclease SfsA"
                     /protein_id="HSQ13450.1"
                     /translation="MRSLFSASVGFACFFSYKIPMRFKSRLIRGTLIQRYKRFLADVR
                     LEDGAIVTAHCTNTGSMMGCKEPGSAVYISRSDNLNRKLAYTWEMIEIAGGWVGINTM
                     HPNRLVPEAVESGVITELSGYPTIRREVKVSAHTRLDLCLEGSGGNCFVEVKNVTLAV
                     DGSAAFPDAVSERGTKHLQALMRLKRQGHRAAIVFVIQRGDCGHFRPADEIDREYGRW
                     LRKAVKAGVEALPYSAKVPPKEIILSGRIAIQL"
BASE COUNT          737 a         1138 c         1024 g          752 t
ORIGIN      
        1 tggtaaaaat tcaccgcggg ctcattccag tccaacaccg accactcgag ccggccgcaa
       61 tggcgcgcca ccgccagctt ggcgatatga gccagcagcg cgccgccgaa gccgcggcgc
      121 cgaaaagctt cttcgacaaa caggtcctcg atgtaaatcc ccggccggcc gagaaacgtc
      181 gagaaattgt gaaagaacag cacgaaaccc acgggttggt tattgcaata accgatcgcc
      241 acttccgcag tgcgccgttg gccgaacagg gtgcgctgca acagttcctc ggtcgcgacc
      301 acctcgtggg ataagcgctc gtagtccgca agtttagtga taaacgaaag gattaccggc
      361 acatccttct tggtagccgg cttgatggca aaatccgcaa tgcccgtcga agtggtcatg
      421 gcttggtcct cagggataaa ttccgttctg acttcgagat tcaccaagga cgccaagggt
      481 tcggacaaat catcctccga acttcgtgcc cttagtggtg aaacttttct tgatcatttg
      541 ccggcgtctt tgagcgcacg ccagactcgt tccggcgtca gcggcaaatc gcgaatgcgc
      601 acgccggtgg cccggtcgat ggcgttgcac accgacggcg cgaccgagag aatgccgcct
      661 tcggccatgc cgcgcacgcc gaagggtccg ggaccgtcgc cgttttcgac aagttcagtg
      721 tgaaactctt ccggcacatc ggagaaagat ggaatgcggt agtcgaccag attcggattg
      781 agcaattggc cattgtcgta gatcaactgc tcgaagaacg tgtgaccgat gccctgcatc
      841 gccgcgccct cttcttgggc gacgcaatgc tcggggtgaa tcgctttgcc gacatcggcg
      901 acggaaatga actttgtcaa tttcactgcg ccggtctcgc ggtcgatatc gacctcggcg
      961 ctacccatgc cgacttccca gaacaccggc agttggttgt cggtgatctc cgggccggct
     1021 tctccgcggc cgatcagctc gccgcccgag cctttgccga aacgtttctc gaacgcttct
     1081 ttgaacgaca gccgcgactc gccgcacacc agcgcaccgt cgacgacttg aatctgtttc
     1141 ggcttcacac ccatggtctg ggcggcgatt tggatatatt gccggcgcaa atcgcgtgca
     1201 gctttctgta ccgctgtgcc cataagcgtc gtcgaacgac tcgagcccgt cgagctatcg
     1261 taaggcgtaa ccttggtatc ggcgccgagc atgcggaact gctccatcgg cagcgtcaac
     1321 tcctcggcgg cgatctgcgt caaggtcgtg cgcacgccct ggcccatttc ggtgctgccg
     1381 gccgcgatgt tggcgatgcc gtcggactgt atgcgaatca tcgccactga caccggcgtc
     1441 gcgccggcgt tggtgatggc gcagcccatg ccaaccgcgc tgtttttgtg ctcgcgcgat
     1501 cgcttccagt gacttgcgcg caccaaggtt ttcaagctcg ctgacagatt ggcgtcgatc
     1561 cccttcaatc cagggcgcag ttcttggcct ttcttgagca agttcttggc ccgcaactcg
     1621 gccgggtcca tgcccagccg ggcggcaagt atttcgattt gcgactcgcc cgcgaagatt
     1681 acctgcggcg cgccgatggc gcgataggag cccgccgagc cggtgttggt ataaacctga
     1741 taggcgttgg tgcggatgtt gggaatccaa gaggggccga gaatgcgcgt cgccgagcgc
     1801 gccgtcacct gcggcccatt atcgtcgtag ccgccggtgt cgagataaat ctccgcctct
     1861 ctcgccatga tcgtgccgtc gtttttcact ccggtcttga tccgcacccg cgcgccgtga
     1921 cggcgcaccg tgaccatcga ctcgccgaca gaattgcaaa tccgcaccgg ctgtttggcc
     1981 ttgcgtgcca gcgcaacgac gagcggctcg aacttagtgt acgacttgct gccgtagcct
     2041 ccgcccaggt agttgataat caagcgtacc ttggccgtcg gcactttgaa tactttggca
     2101 atgtcgccac gcacttgaaa cggatgctgc gcgcacgacc aaacggtgat ctcgtcgttg
     2161 acatcatagt gcgcgatcgc cgagtgcggc tccatggcat agtgatagac catcgggaaa
     2221 gtgaaattgt cctcggcgat gatgtccgac tgcgcgaagc cttcgtcagc atcgccgcga
     2281 ttgaccttct catgggtgcc gatgttgctg gttttatctt cgtgcaccaa cggcgcgccc
     2341 ggtttgattg cggcttcgat gccggccacc gtcggcagct cgtcgtagtc gacgtcaatc
     2401 aacgccagcg cttcctcggc aattgcaatg tccaccgccg ccaccgccgc caccggctcg
     2461 ccaacatagc gcaccttatt gatggcgatc accggccggc cgttatagat cgggttcaga
     2521 tcggcgatat ccgccgccgt cagcaccgcg atgacaccgg gcagcgcctc ggcttgcgag
     2581 gcgtcaatcg agcggatccg ggcatgggga aaagtgctgc gcaagatttt cccataaagc
     2641 attccaggaa cggtgatatc accgacaaat ttcgccgcgc cagtgacttt ctcgacaccg
     2701 tcgacgcgct tgacactgtg accgacgaat ttgaactcgc gcttagccat gaacgctccc
     2761 aactcgaaaa atgattaacg attcctaaca aagcgttttc gcttgttcaa ggaagagccg
     2821 aaaactcagt ctgtgacttc gattccttcg gctctgcaca ggctcaactc cgtgagaagt
     2881 cttttcagcg cttcggtggg attcgcctgc ttcttcagtt ataaaatccc catgcgcttc
     2941 aagtcccgtc tgatccgcgg cacgctgatc caacgctaca agcgatttct cgccgatgtg
     3001 cgtctggaag acggcgccat cgtcaccgcc cactgcacca acaccggcag tatgatgggc
     3061 tgcaaagagc ccggcagcgc ggtttacatt tcccgcagcg acaatttgaa ccgtaaactc
     3121 gcttacacct gggaaatgat cgagatcgct ggcggctggg tcggcatcaa taccatgcac
     3181 ccgaacagac tcgtgccaga agcggtcgag tcgggcgtga ttacagaact gagcggctac
     3241 ccaaccattc gccgcgaagt caaagtcagc gcccacacgc gtctcgactt gtgtttggaa
     3301 ggaagcggcg gcaactgctt cgtcgaagtg aaaaatgtca ccctcgccgt cgacggcagc
     3361 gcggcttttc ccgacgccgt cagcgaacgg ggcaccaaac atttgcaagc actcatgcgc
     3421 ctcaagcgcc aaggccaccg cgccgccatc gtattcgtca ttcaaagagg tgattgcggc
     3481 cacttccgac cagccgacga gatcgatcga gaatacggcc gctggctgcg caaagcggtc
     3541 aaagccggcg tcgaagccct gccctacagt gccaaggtgc cgcccaaaga aatcatactg
     3601 tccggacgaa ttgccatcca attgtagggg cggacctatg tgtccgcccc c
//
LOCUS       DATIRS010000832         3707 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1831600, whole genome shotgun sequence.
ACCESSION   DATIRS010000832 DATIRS010000000
VERSION     DATIRS010000832.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3707
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1831600"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..3327
                     /locus_tag="VLM90_10540"
     CDS             <1..3327
                     /locus_tag="VLM90_10540"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSQ13451.1"
                     /translation="NTINTMVDQLSSFASEVTRVAREVGTEGILGGQADVKGVAGTWK
                     DLTDNVNVMATNLTEQVRGIVKVVTAVATGDLKLKLTVAAKGEVAALADTINNMTGTL
                     ATFADQVTTVAREVGVEGRLGGQANVPGAAGTWKDLTGNVNLLADNLTNQVRAIAEVA
                     TAVTQGDLTRSIQVEAMGEVAELKDNINTMIRNLRQTTDSNTEQDWLKTNLARFTGML
                     QGQRDLVSVGKLILSELAPLVDAHQGLIYQMETEDKPHLQLLASYANACEGGYPAQLE
                     PGAGFIGQCAVEKRRILINDVPADTVPLGSISISVLPRAVVVFPVLFEDQVKAVLLLA
                     SLHPFAPAHLAFLEQLTVSIGIVLNSIEATMQTEGLLKQSQQLAAELQTQQRELQQTN
                     DQLGQKAQQLAEQNAEVERKNQEIEQARRALEEKAAELALTSKYKSEFLANMSHELRT
                     PLNSILILGQLLSENSDGNLAPKQVEFARTIHGAGTDLLNLISDILDLSKIESGTVTI
                     EAEEIFFANLLDMVARPFRHEAENRKLSFNVQISAELGRSFVTDSKRLQQVLKNLLSN
                     AFKFTAQGGVHLAVTTAAGGWSADHPVLKQAPGVVAFEVTDTGIGIAAEKQRLIFEAF
                     QQADASTSRKYGGTGLGLAISRELATLLGGEIRLTSVLGQGSTFTLYLPMTYSEPAGT
                     LWRRGGFVEPVSVPALSVTTASPEIIPDDRAIIAEGDPVLLIIEDDPHYARVLLGLAR
                     DKGFKGLVATRGNIGLDLAREYKPAAITLDIFLPDMLGWTVLNNLKRDAATRHIPVQI
                     ISLEEEQRHGLAHGAFSYMVKPVTTEGIEQCLERIHSFITPRVKRLLVIEDNQAESQS
                     IVELLAHDDIEIVVAGTASAALEALGSGAFDCCVLDLRLPDMSGFELLENIKTDPRLE
                     HLPVVVFTGKDLGAEEERSLKTMAKSIVLKDVQSPERLFDETALFLHRIINQLPEAKQ
                     KMLERLHSSNEVLHGHKVLVVDDDARNIFALSTVLENHDMQVMSATNGRQAIELLQRT
                     PDVSVVLMDIMMPEMDGYETMREIRRRGEFHSTPILALTAKAMKGDREKCLEAGASDY
                     VAKPVNTEQLLSMLRLWLYR"
     gene            3381..>3707
                     /locus_tag="VLM90_10545"
     CDS             3381..>3707
                     /locus_tag="VLM90_10545"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSQ13452.1"
                     /translation="MSDPTHILLVDDQARNLDALEAVLASPDYRLVRAQSANDALLAL
                     LTYDFAVIVLDIRMPEIDGYELAQMIKQRKKNQHLPIIFLTAYLQDDRAVLEGYGAGA
                     VDYLTKP"
BASE COUNT          789 a         1128 c         1113 g          677 t
ORIGIN      
        1 aacaccatca acacgatggt cgaccagctc tcgtcgttcg cgtccgaagt gacgcgcgtg
       61 gcgcgtgaag tgggtaccga agggatcctc ggcggtcagg ccgatgtgaa aggcgtggcc
      121 ggcacgtgga aggacttgac cgataacgtc aacgtcatgg cgaccaattt gaccgagcag
      181 gtgcgcggca tcgtcaaggt cgtcaccgcg gtggcgaccg gcgatttgaa gctgaagctc
      241 acggtcgccg ctaaaggcga ggtggccgcg ctggccgata ccatcaacaa catgaccggc
      301 accttggcga ccttcgccga ccaggtgacc acggtggcgc gcgaagtcgg cgtcgaaggc
      361 cgcttgggcg gccaggccaa cgtcccgggc gccgccggca cctggaaaga cttgaccggc
      421 aacgtcaatc tgctggccga taatttgacc aatcaggtgc gcgccatcgc cgaggtcgcc
      481 accgcggtca cccaaggcga cttgacgcgc tcgattcagg tcgaggcgat gggcgaggtg
      541 gccgagctca aagacaacat caatacgatg attcgtaacc tgcgccagac caccgacagc
      601 aacaccgaac aggactggtt gaagaccaac ctcgcgcgct tcaccggcat gctgcaaggc
      661 cagcgtgacc tggtgagcgt cggcaaattg attctatccg agctggcgcc actggtcgac
      721 gcgcaccagg gattgatcta ccagatggag accgaggata agccccatct ccagttgctc
      781 gccagctatg ccaatgcgtg cgaaggaggc tatccggcgc agctcgaacc gggcgccggc
      841 tttatcggcc agtgcgccgt agagaagcgc cgtattctga tcaacgacgt gccggcggat
      901 accgtgccgc tgggttcgat ttccatcagc gtattgccgc gcgccgtggt ggtctttccg
      961 gtgctgtttg aagatcaggt caaagcggtg ctgctcttgg cctcgctgca cccgttcgcg
     1021 ccggcccatt tggcgttttt ggagcagctg accgtcagca tcggcatcgt cctcaacagc
     1081 atcgaagcga ccatgcagac cgaagggctg ctcaagcaat cgcagcaatt ggccgccgag
     1141 ctgcaaactc agcagcgcga actgcagcag accaacgatc agctcggaca gaaagcccaa
     1201 caactggccg agcagaacgc cgaagtcgag cgcaaaaacc aggagatcga gcaggcgcgc
     1261 cgcgccctcg aggagaaggc tgcggaactg gcgcttacgt cgaaatacaa gtcggagttt
     1321 ttggccaaca tgtcgcacga gctgcgcacg ccgctgaaca gcattttgat cctcggccaa
     1381 ctgctgagcg aaaactccga tggcaacctg gcgcccaagc aagtcgagtt tgcccggacg
     1441 attcatggcg ccggcaccga cctgttaaat ctcatcagcg acattctcga cctgtccaaa
     1501 atcgaatcgg gtaccgtgac catcgaagcc gaggaaatct tttttgccaa tctgctcgat
     1561 atggtggcgc gacctttccg ccatgaggcg gaaaaccgca agctcagttt caacgtgcaa
     1621 atcagcgccg aattgggccg gagctttgtc accgattcca agcgcttgca gcaagtactg
     1681 aagaatctgc tgtccaatgc ctttaagttt accgcccagg gcggcgtaca cttggcggtc
     1741 accacggcag cgggtggctg gagcgccgac catccggtgt tgaagcaggc gcccggggtg
     1801 gtggcgtttg aagtcactga taccggcatc ggcatcgcgg cggaaaaaca gcggcttatc
     1861 ttcgaggctt tccaacaggc cgatgccagc accagccgta aatacggcgg caccggctta
     1921 ggcctggcga tcagccgcga gctggcgacc ctgctgggcg gcgaaatccg cttaactagc
     1981 gttttgggcc agggcagcac tttcacgctt tatctgccga tgacctacag cgaacccgcc
     2041 ggtacgctgt ggcgccgcgg cggctttgtc gagccggtca gcgtcccggc gctgtcggtg
     2101 acaaccgcca gtcccgagat cattcccgac gaccgggcca tcatcgccga gggcgaccct
     2161 gtgctgctga tcatcgaaga tgacccgcac tatgcccgcg tgctgctcgg cttggcgcgc
     2221 gacaaaggct tcaaaggatt ggtcgcgacc cgcggcaaca ttggcctcga tctggcgcgc
     2281 gaatacaagc cggcggcgat caccctcgat attttcctgc ccgatatgct cggctggacg
     2341 gtgctcaata atctgaagcg cgatgccgcg acgcgccata tcccggtgca gatcatctcg
     2401 ctcgaagaag aacagcgcca tggcctggcg cacggcgcgt tctcgtatat ggtcaagccg
     2461 gtgaccaccg aaggcatcga gcaatgtctt gagcgcatcc acagcttcat cacgccacgg
     2521 gtcaaacggc tgctggtgat cgaagacaat caggcggaga gccaaagcat cgtcgagctc
     2581 ttggcccacg acgatatcga gatcgtcgtc gccggcaccg cctcggccgc gcttgaggcc
     2641 ttgggcagtg gcgcgtttga ctgctgcgtg ctcgatttgc gcttgccgga tatgagcggc
     2701 tttgagctgc tcgaaaacat caaaaccgac ccccggctcg agcacttgcc ggtggtggtc
     2761 tttaccggca aggatctcgg tgcggaggaa gagcgtagtc tcaagaccat ggccaaaagc
     2821 atcgtgctaa aggacgtgca atcgcccgag cggttgtttg acgaaaccgc tttgttcctg
     2881 caccggatca tcaaccaatt gcctgaggct aaacaaaaga tgctcgaacg gctgcattct
     2941 tccaacgaag tcttgcacgg ccacaaggtg ctcgtggtcg acgacgacgc gcgcaatatt
     3001 tttgccctgt cgacggttct ggaaaatcac gacatgcaag tcatgagcgc caccaacggc
     3061 cgccaggcga tcgagttgtt acagaggacg cccgacgtca gcgtggtgtt gatggacatc
     3121 atgatgccgg aaatggacgg ctacgaaacc atgcgcgaga tccgcaggcg cggcgagttc
     3181 cattcgacgc cgatcctcgc gctcaccgcc aaggcgatga agggcgaccg ggaaaaatgt
     3241 ctcgaagccg gcgcctcgga ctacgtcgcc aagccggtca ataccgaaca gctcttgtcg
     3301 atgctgcggt tgtggctata tagataaccg aatcgaccgg ggggcgattc atgcatcgcc
     3361 cctgccttga ttcttatggt atgagcgatc cgacccacat tctcctcgtc gacgatcagg
     3421 cgcgcaatct cgacgcgctc gaggcggtat tggcatcgcc ggactaccgg ctggtgcgcg
     3481 cccaatcggc caacgacgcg ctgctggcac tgctcaccta cgacttcgcg gtcatcgtgc
     3541 tcgatatccg catgccggag attgacggct acgagctcgc gcagatgatc aagcagcgca
     3601 aaaagaacca gcatctgccg atcattttct tgaccgccta tttgcaggat gatagggccg
     3661 tcctcgaagg ctacggcgcc ggcgcggtgg attacttaac caagccg
//
LOCUS       DATIRS010000833         1724 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1143893, whole genome shotgun sequence.
ACCESSION   DATIRS010000833 DATIRS010000000
VERSION     DATIRS010000833.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1724
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1143893"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            195..1229
                     /locus_tag="VLM90_10550"
     CDS             195..1229
                     /locus_tag="VLM90_10550"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ13453.1"
                     /translation="MKFGYYILNTYVPELDGGSREIYSKWLEQMDAAEALGFDSLWVT
                     EHHFRHFGGQMPSPSVILAAAAQRTKKIRVGAAVSLLPMHNPLRIAEEFAMVDQLSEG
                     RLCFGAGRGMHPTEYAVFGADWSNAQKRLPEALDIVMRAWSGAEFEWQSEHYKFPKLK
                     VYPQPYQRPHPPIYITANRDPESFHLAGSRGHHLMTLPWIATNEEQGPRVESYKAALR
                     GAGHAVDDKDVFTMYPVYVGDSDEQAKADVVDHWHRWRGFALDAVGATPGSAAHERVF
                     PHLAYDAMVRDSRGVFGGPASCVRILKRIVETVGTTHIGLTFHFGGLSQDKVLRSMER
                     CAKSVLPALR"
     gene            1337..>1724
                     /locus_tag="VLM90_10555"
     CDS             1337..>1724
                     /locus_tag="VLM90_10555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13454.1"
                     /translation="MKHSAKTIPFEELRSLDLQKCDSVGDIVDAMRYCAFGARMLGEV
                     AKTICEMATAQDQPLLIYDGLEKTPLGRLLKKFVKNRWCRRIVTPAAYAKMRTRGGNV
                     IVVGAFSERDAEPIYKKPKRAIFINPF"
BASE COUNT          346 a          493 c          529 g          356 t
ORIGIN      
        1 ggtggtgatt cgaatcatgc gagtctcctt gggatcgtta tcgctctata atcccaattt
       61 accgcgcgat tgcaaataga agtggctctg cgcagcgatc gccgggacgc tgtcaaatga
      121 taacttgcgc tctttgcttg acccacaggc gaattcccca tattttcggt ggcacttgac
      181 taagtgaggt cgatgtgaaa tttggatatt acattctcaa tacgtatgtt cccgagctgg
      241 atggcggtag ccgggagatt tattccaagt ggctcgagca gatggacgcc gcggaagcgc
      301 tgggtttcga ttcgttgtgg gtgaccgagc atcactttcg ccacttcggc gggcagatgc
      361 cgagtccgtc ggtgatcctc gcggcggcgg cgcagcgcac caagaagatt cgtgtgggcg
      421 cggcggtatc gctgctgccg atgcacaatc cgctgcgcat tgccgaagag tttgccatgg
      481 tcgaccagct gtccgaaggg cggctctgtt tcggcgccgg gcgcggcatg catccgactg
      541 aatacgcggt gttcggcgcc gattggagca acgcgcagaa gcgtttgccc gaggccctcg
      601 atatcgtcat gcgggcgtgg agcggcgcag agttcgagtg gcagagcgag cattacaagt
      661 tccccaagct caaagtctat ccgcagccct atcagcggcc gcatccgccg atctacatca
      721 ccgccaaccg cgatccggaa agtttccatc tggccggttc gcgcggccat catttgatga
      781 cgctgccgtg gatcgccacc aacgaggagc aggggccgcg ggtggaatcg tacaaagcgg
      841 cgctgcgtgg ggcgggccat gccgtcgacg ataaagatgt gttcaccatg tatcccgtct
      901 atgtcggcga cagcgacgaa caagccaaag ccgatgtcgt cgaccactgg caccgttggc
      961 gcggctttgc cctggacgcg gtcggtgcca cgcccggcag cgcggcccat gagcgtgttt
     1021 tccctcacct cgcctatgat gccatggtgc gcgacagtcg gggtgtgttc ggcgggccgg
     1081 caagctgcgt gcgcatcctc aaacgcatcg tcgagaccgt cggcacgacc catatcggtt
     1141 tgacctttca cttcggcggg ctcagccagg acaaggtgct gaggtcgatg gagcgctgcg
     1201 ccaagtcggt gttgccggcg ctgcgctaga atcgctgaaa gttagccgca aagaacgtaa
     1261 aaaacttcaa ttcttttttg ggcgggttta gaacccgccc tctttgctag gggcatttga
     1321 agacacgaaa gctgcaatga aacattccgc caagacaata cccttcgagg aactgcgatc
     1381 cctcgatctg caaaagtgcg acagcgtcgg cgatatcgtc gacgcgatgc gctactgcgc
     1441 cttcggtgcg cgcatgctcg gcgaagtggc caagaccatt tgcgagatgg cgacggctca
     1501 agaccagccg ctgctgatct atgacggtct ggagaagaca ccgctggggc gactgctcaa
     1561 gaaattcgtc aagaatcgct ggtgccggcg gatcgtgacg ccagcggcct acgccaagat
     1621 gcggactcgc ggcggaaatg tcatcgtcgt cggtgcattc tccgagcgcg atgccgagcc
     1681 gatttataaa aagcccaagc gcgccatctt tattaacccc ttcg
//
LOCUS       DATIRS010000834         1616 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_848740, whole genome shotgun sequence.
ACCESSION   DATIRS010000834 DATIRS010000000
VERSION     DATIRS010000834.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1616
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_848740"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..310)
                     /locus_tag="VLM90_10560"
     CDS             complement(<1..310)
                     /locus_tag="VLM90_10560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13455.1"
                     /translation="MSQTILDADSHVSEPLNLWQERLPEKYRAIAPHMETKYQGQPGA
                     WWHIEPDRQPHNVILGFGANKSMAELQKLLEGFSYAGAHRGGWDPAQRLKDMDQDGVT
                     G"
     gene            complement(368..1339)
                     /locus_tag="VLM90_10565"
     CDS             complement(368..1339)
                     /locus_tag="VLM90_10565"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13456.1"
                     /translation="MKTRRTPRSEKLVALILFAAFIHAVPAAAQKLTQIHIGVPTNTV
                     TWFPLYVAWKKGIFQEQGLELLPVTMSVRASLGALASRHISYITPLGSSMTAIANGLP
                     AKVIMIFAVRSHHVLVAKRDIATPSALRGRGVAISQPGGTVHRQFLKILEHYRVDAKN
                     INMINLGEMPSRALALKAGTIDAAMLSVPYDLFMEKDGFRPLAYMKDVAEFPLLGLIA
                     HDDRMRERPDEVKRVLTAALKGIAYTKSHREEVLPLLKQFVGLPDLEMTRKTFDVIKD
                     LWPDNGIPSDKGLATALTMADVPANIPAERIVYWSFVSSAVLSLKIR"
     gene            complement(1432..>1616)
                     /locus_tag="VLM90_10570"
     CDS             complement(1432..>1616)
                     /locus_tag="VLM90_10570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13457.1"
                     /translation="SIEQTKKDLAALAVSVPASAPRDIAGGIFGHLTQRDMDGCKIGQ
                     YATSDPDGVVLDFSEA"
BASE COUNT          301 a          452 c          489 g          374 t
ORIGIN      
        1 cgccggtgac gccgtcctgg tccatgtctt tcaagcgctg cgccgggtcc cagccgccgc
       61 gatgggcgcc ggcgtaggag aagccttcca gcagtttttg cagctctgcc atcgatttgt
      121 tcgcgccgaa acccaagatc acgttgtgtg gctggcgatc cggttcgatg tgccaccagg
      181 cgccgggctg gccctgatat tttgtctcca tatgcggcgc gatggcgcga tatttttccg
      241 gcaagcgctc ttgccacagg ttcaacggtt cgctgacatg ggagtcggca tccaaaattg
      301 tttgtgacat ggttttttcc tctggattag gcttttcctc gatagcgctc accatagaga
      361 tttcattcta acgaattttc aaggacagca cggctgagct gacaaaggac caatatacga
      421 tcctttcggc tggaatattc gccggaacgt cggccatcgt cagagctgtg gccagccctt
      481 tgtcggaagg gatgccgttg tccggccaga gatctttgat tacgtcaaag gttttcctcg
      541 tcatttcgag gtccggcagg ccgacgaact gtttgagcag cggcaggact tcctcccgat
      601 ggcttttggt gtaagcgatg cctttgagcg cggcggtcag aactcttttg acttcgtcgg
      661 gccgttcgcg catgcggtcg tcgtgggcga tcaggccaag caggggaaac tcggcaacgt
      721 ctttcatata cgcgagcggc cgaaaaccgt ccttttccat gaacagatcg tagggcacgc
      781 tcaacatcgc cgcgtcgatg gtgccggctt tgagcgcgag agcacggctt ggcatctcac
      841 ccaggttgat catgttgatg tttttggcgt cgaccctata gtgctcaaga attttcaaaa
      901 actgacggtg cacggtgccg cccggctggc tgatggcgac gccccggccg cgcagcgcgc
      961 tgggcgtggc gatatcgcgt ttcgccacca gcacatgatg cgagcgcacc gcgaagatca
     1021 tgatcacttt ggccggtaga ccattggcga tcgccgtcat cgatgagcca agcggcgtga
     1081 tgtaggagat atggcgcgac gccagcgcgc ctagcgaggc gcgcaccgac atggtcacgg
     1141 gcaacagctc gaggccctgc tcctgaaaga tgcctttctt ccaagctacg tagaggggaa
     1201 accaggtgac ggtgttggtc ggcacgccga tgtgaatctg cgtcagcttt tgcgccgccg
     1261 ccgggactgc gtgaatgaac gcggcgaaga gaatgagcgc gaccagcttt tcgcttcgag
     1321 gcgttcgcct agttttcaaa atcccgccaa atctccattt acaaagggag gtattgggag
     1381 actgcccgtg agcgcttttt atccgcaatg ttgaaccatc gcttgttgcc attaagcctc
     1441 ggaaaagtcg agcacgacgc cgtcggggtc tgaggtcgcg tactggccga tcttgcagcc
     1501 gtccatgtcg cgttgggtga ggtggccgaa gatgccgccg gcgatgtctc tcggcgccga
     1561 cgccggcact gagaccgcta gcgctgcgag gtcttttttt gtctgttcaa tgctct
//
LOCUS       DATIRS010000835         1668 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_848894, whole genome shotgun sequence.
ACCESSION   DATIRS010000835 DATIRS010000000
VERSION     DATIRS010000835.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1668
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_848894"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..842)
                     /locus_tag="VLM90_10575"
     CDS             complement(<1..842)
                     /locus_tag="VLM90_10575"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSQ13458.1"
                     /translation="MRSALNKLYHWRYPLAIVMTGLTYLARTALQPILGELGGGVLFT
                     VAITFSALNGGFGPGLLATALSMILAAFAIFEPHGLIALAETASLLTLGLFALVGVSI
                     SAMSGALHKFGRRREGESGAPSHVISVSQDISDRKRAEDALRTSEEHYRLTFEQAAVG
                     ISHVGLDGRWLRVNQKVCEITGYSAEEMMALAAQDLTHPDDLQLNMDLRAQLMAGEIT
                     TFSMEKRYIRKDRELVWVNLTASLHCDTSGAPNHFISVIQDISDRKRAEDALRTSEER
                     YRLT"
     gene            complement(1126..>1668)
                     /locus_tag="VLM90_10580"
     CDS             complement(1126..>1668)
                     /locus_tag="VLM90_10580"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSQ13459.1"
                     /translation="RERLELSGGKLEVTSQPGQGTRVRFTLPAPPSKMAPAVARGAVT
                     RAALGTGKQLRIALVDDHTVVRRGMRQMLEEYADLTVVGEAKDGLAGVELAREFRPDV
                     VVMDVNMPRMNGIEATKLILQEMPSTIVVGLSFDNGAEVAQEMKIAGAFTCVTKERAA
                     EDIHQAIVDAVEERRGVVAD"
BASE COUNT          330 a          525 c          460 g          353 t
ORIGIN      
        1 aacgtcagcc gatagcgttc ctcgctcgtg cgcaacgcgt cttcggcgcg cttgcggtcg
       61 ctgatgtcct ggatgacgct gataaaatgg ttgggcgcgc cggacgtatc gcagtgcagt
      121 gaggctgtca aattcaccca cacaagctct cggtctttgc ggatatatcg cttctccatc
      181 gaaaacgtgg tgatctcgcc ggccatgagt tgcgccctca aatccatgtt gagttggaga
      241 tcatccgggt gggtaaggtc ttgggccgcc aacgccatca tctcctcggc ggagtatccg
      301 gtgatttcgc acaccttctg gttcacccgt aaccaacggc cgtctaatcc cacatgcgat
      361 atgccgaccg cggcttgctc gaacgtcagt cgatagtgtt cctcgctcgt gcgcaacgcg
      421 tcttcggcgc gcttgcggtc gctgatgtcc tggctgacgc tgataacatg actcggcgcg
      481 ccggattcgc cttcgcgacg acggccaaat ttgtgcaacg ccccggacat cgcactgatc
      541 gatactccga ccagggcaaa caacccgagg gtgagcagac tagcggtttc ggccaatgca
      601 attaaaccgt gcggctcaaa gatcgcgaaa gcagctagaa tcatgctcag tgcggtggcc
      661 aacaggccgg gcccgaatcc gccgttcaaa gcgctgaacg tgatggccac ggtaaacagc
      721 acccccccgc cgagctcgcc aagaattggc tgcaaggccg ttcgcgctag atatgtcaat
      781 ccggtcatga cgatcgctag cggatagcgc cagtggtaca gcttgtttag cgcggatctc
      841 atgtgggctc tcccgtgacc ctggaagcga aattcattag cgcgcgattg cttggtcgtg
      901 gttcagttca aactcggccc ggctgcccgg accagaaagg atttctcgcg gcgctcgaaa
      961 tgacagattg gggctcgctg tcatcccgaa ccaaggacct atcgttaccc ataagtttca
     1021 accgcatacg gcgggagagt gacactcaac gaatctcgct caaccgttca agagctggcg
     1081 aggtttccat tatccctcta tgggaaagag cggtcaggcg ccgccttaat ctgccaccac
     1141 gccgcgccgc tcctccaccg cgtcgacgat cgcttggtga atatcctcgg ccgcccgctc
     1201 cttggtaacg caggtgaagg cgccggcaat tttcatctct tgcgctacct cggcaccgtt
     1261 atcgaaggac agtccaacca cgatcgtcga cggcatttct tgaagaatta atttggtcgc
     1321 ttcgatgccg ttcatgcgcg gcatgttgac atccataacg accacgtcgg gtctaaactc
     1381 gcgcgccaac tcgacgcctg ccaggccgtc tttggcttcg ccgaccaccg taaggtcggc
     1441 gtattcctcg agcatttggc gcatgccccg gcgcaccacc gtatgatcat ccaccagagc
     1501 gatacgtaac tgtttgccgg tccccaaggc cgctctggtc acagcgccgc gggcaacagc
     1561 tggcgccatt ttgctgggcg gcgccggcaa ggtaaaccgc accctggttc cttgccccgg
     1621 ctgcgatgtc acttcgagct tgccgccaga caactccaat cgttcgcg
//
LOCUS       DATIRS010000836         1652 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1635663, whole genome shotgun sequence.
ACCESSION   DATIRS010000836 DATIRS010000000
VERSION     DATIRS010000836.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1652
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1635663"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..497)
                     /locus_tag="VLM90_10585"
     CDS             complement(<1..497)
                     /locus_tag="VLM90_10585"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ13460.1"
                     /translation="MKFSIHSLHGGVKNIDEIHKRAVRAEELGWDGIFLGESHLSSID
                     SFQTLASCAMLTKRVLLGIAVTNFVFRHPTVIAGAAASLNEISKGRAIIGLGTGDGPV
                     YTQGLKAMPMKDFEVGIKTIRNLVRGGTETFSTGKVGIGFKINQPAPIYVSAEGPKGL
                     QLAGR"
     gene            complement(595..1410)
                     /locus_tag="VLM90_10590"
     CDS             complement(595..1410)
                     /locus_tag="VLM90_10590"
                     /inference="COORDINATES: protein motif:HMM:NF014899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13461.1"
                     /translation="MPIVFACAASHAPGMTAWTEAAPKQQADKFLGSYRGLGERLAAA
                     KPDTIVALTVEHWANFFLNSMPTFCIGRADHYDGPIEEWLRIPKARVPGDAELSAELI
                     DACLDSHFDPLFSDELLFDHATFLPLHFLNPHMALPVVPVIINALTPPMPTAKRCFAF
                     GEFLGKILQQSEKRIALIATGGLSHWPGEAQHGRINIPFDKKFLENLITGDHHQLTAY
                     SHDEINSAAGSGGHEIRTWIALAGAVQSWKAELIAYEPVAPWATGCALVQFSQ"
     gene            complement(1414..>1652)
                     /locus_tag="VLM90_10595"
     CDS             complement(1414..>1652)
                     /locus_tag="VLM90_10595"
                     /inference="COORDINATES: protein motif:HMM:NF019366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13462.1"
                     /translation="QKLIYHVNRDAERREHYRQDAGAFSKKYDLTAAESAAVLNVDVR
                     ALYTMGVHSLLLRPFTLLNKVSNEDYAKALKGLV"
BASE COUNT          328 a          443 c          516 g          365 t
ORIGIN      
        1 ctgcggccgg cgagctgcaa gcccttgggg ccttcggcgg aaacataaat cggcgccggc
       61 tggttgatct tgaagccgat gccgaccttg cctgtggaaa aggtttcggt accgccgcgc
      121 accaaattcc gaatggtctt gatgccgact tcaaaatcct tcattggcat ggctttcaag
      181 ccttgcgtgt agaccgggcc atcgccggtg ccgagaccta tgatggcgcg gcctttggaa
      241 atctcattca atgacgcggc cgcgccggcg atcacggtgg ggtggcggaa cacgaagttg
      301 gtgacagcga tgccaagtag cacacgctta gtgagcatgg cgcagctcgc cagggtctga
      361 aaagagtcga tggaactcag atggctctcg ccgagaaaga tgccgtccca accgagctct
      421 tcggcgcgca cggcacgctt atggatttcg tcgatattct taacgccgcc gtgcaggctg
      481 tgaatgctga atttcatgtt ggtcgctccg gagctttaat cgcaaactgc ccagcatggc
      541 ggagccgcaa aagggcgtaa aaaaacgcag cctgctttgc cgggttcgcc tcattcattg
      601 ggagaattgt accagagcgc atcccgttgc ccagggtgca accggctcgt aggcgatcaa
      661 ttcggctttc cagctttgca ccgcaccggc gagggcgatc caggttctga tttcatggcc
      721 gccggagccg gctgcgctgt tgatctcgtc gtggctgtag gcggtcaatt gatgatgatc
      781 accggtgatg agattctcca gaaacttttt gtcgaacggt atattgatcc ggccatgctg
      841 cgcttcgccg ggccaatggg ataggccacc ggtggcgatc agcgcgattc ttttttcgct
      901 ctgttgtaaa atcttgccga ggaactcgcc gaaggcgaag cagcgttttg ccgttggcat
      961 cggcggtgtc agggcgttga tgatcaccgg caccaccggc agcgccatgt ggggattcaa
     1021 aaaatgcagc ggtaaaaacg tcgcgtggtc gaacaagagc tcgtcagaaa acagcggatc
     1081 gaagtggctg tcgaggcagg cgtcgatcag ttccgccgat agttcggcat cgccggggac
     1141 gcgggcttta gggatgcgca gccattcttc aatcggtccg tcgtagtggt cggcgcggcc
     1201 gatgcaaaag gtcggcatgc tgttgagaaa aaaattggcc caatgctcga cggtgagggc
     1261 gacgatggta tccggtttcg ctgccgctag ccgttcgcct agtccgcggt agctgccgag
     1321 aaatttatcg gcttgttgct tgggcgcggc ttcggtccaa gcggtcatcc ctggagcgtg
     1381 gctggcggcg caggcaaata cgatcggcat aggtcagacc aatcctttca acgctttggc
     1441 atagtcttcg ttggagactt tgttgagcaa ggtaaacggc cgcaggagca gcgagtggac
     1501 gcccatggtg tacagggcgc gcacgtcgac gttgagaacc gccgcgcttt ctgccgcggt
     1561 cagatcgtat tttttgctga acgcaccggc gtcttggcga taatgctcgc gccgctcggc
     1621 atcccgattc acatgataga tcagtttttg ca
//
LOCUS       DATIRS010000837         1818 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_652325, whole genome shotgun sequence.
ACCESSION   DATIRS010000837 DATIRS010000000
VERSION     DATIRS010000837.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1818)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1818)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1818
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_652325"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            139..1014
                     /locus_tag="VLM90_10600"
     CDS             139..1014
                     /locus_tag="VLM90_10600"
                     /inference="COORDINATES: protein motif:HMM:NF015709.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family acid phosphatase"
                     /protein_id="HSQ13463.1"
                     /translation="MPSPSLTGHHSAARPLLYLLVILSTITGCTAPSSNSRQNEAPSR
                     ADNRLDAILWQTTSAEYRVLAQMIYATAQTHLERALADPNWTALSAQKDNYQKLPPAV
                     IMDIDETVIDTGAFQSQLARSNARFSSRPWREWQTRNQPLAVPGALEFIAAAQASGVT
                     IFFVTNRDHPTEAATRLNLATIGVKLPSDLDTVLCRDERPDWGSDKESRRRYIAQSYR
                     VLMLFGDDLQDFLSEYRTTAAQRTAAAVKHNTWGTKWFMLPNPMYGSWEASLYDFRND
                     LGSEEVSQRKFDQLR"
     gene            1023..>1818
                     /locus_tag="VLM90_10605"
     CDS             1023..>1818
                     /locus_tag="VLM90_10605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13464.1"
                     /translation="MIGKVLSVGWTLVALTIPATAVRAQSAKAIVDQAAKAMGGINAL
                     RALKSEVIESEGKQFDSSSTPLPLGPTRQISTFRYTLTRDLTQPRLRLEWDGGNAARN
                     QRIRFVEVIDGGIGMLREGATNTAKFSRLHPGRLATRLREEKRAPTKILLTAANQSSL
                     RRRADAEVNGQRNYVLSFIDNHDEFHLYIDAQTHLPTQVDILEDDPLEGDSSYVLRYG
                     DWRKSGAVMLPFSLRTELNGKPLQEEQIKSIQHNLSYAADPFAIAPE"
BASE COUNT          410 a          577 c          491 g          340 t
ORIGIN      
        1 accctatggt ttcgatgtcg tcgacatggc gtcacctttg gggcccaact gggacgaggc
       61 catcgatctg atctgccagg aaatcattcc cgaaatcgaa cggcgcgtag cgtcgtacta
      121 aagagctcgc ccatgatgat gccatcgccc tcgctaacag gtcaccactc cgccgccagg
      181 cctctgctat atctgttggt gatcctgagt actatcacgg gctgtacggc gccatcgtct
      241 aactcgcgac agaatgaagc gccaagccga gccgacaacc ggctcgacgc gatcctatgg
      301 cagaccactt cagccgaata tcgcgtgctt gctcaaatga tttacgccac cgcccagacg
      361 cacttggagc gcgccctcgc cgatcccaac tggaccgccc tatcggcgca gaaggataat
      421 tatcaaaagc tgcccccggc ggtaatcatg gatatcgacg aaaccgtgat cgacaccggc
      481 gccttccaaa gtcagttggc gcgcagcaac gcgcgctttt cgagccgccc ctggcgcgaa
      541 tggcaaaccc gcaaccaacc tttggcggtt cccggtgcgc ttgaattcat tgccgctgcg
      601 caggcaagcg gcgtgacgat atttttcgtg accaatcgcg atcatcccac cgaggcggcc
      661 acccggctca acctcgccac catcggagtc aaactaccga gcgatttaga cactgtgctt
      721 tgccgggacg agcggccgga ctggggcagc gacaaggaga gccggcgccg ctacatcgcc
      781 cagtcttacc gggtgctcat gctatttggt gacgacctgc aagatttcct ctccgagtac
      841 cgcaccacgg cggcgcaacg tactgccgca gcggttaaac acaacacatg gggcaccaag
      901 tggttcatgc tgcccaatcc gatgtacggt tcttgggaag cgtcgcttta cgattttcgc
      961 aacgatcttg gcagcgaaga ggtatcgcag cggaaattcg accagctgcg ttaggagaga
     1021 caatgatcgg caaagtgtta agcgtcggct ggacattggt cgctctcacc attccagcaa
     1081 ccgccgttcg agcccaatcg gccaaagcga tcgtcgacca ggccgccaaa gcgatgggcg
     1141 gcataaacgc tctgcgcgcg ctgaagtctg aagtcatcga gagtgaaggc aagcagttcg
     1201 actcgtcatc gacaccgcta ccgctcggcc cgacccggca gatcagcacc ttccgttata
     1261 ctctcacccg cgacctgacc cagccgcgtc tgcgcctgga atgggacggc ggcaacgctg
     1321 cgcggaatca gcgtatccga ttcgtcgaag tcatcgacgg cggcatcggc atgctgcgcg
     1381 aaggcgcgac caatacggcg aagttcagcc gtttacaccc cggccgtctg gccacccgct
     1441 tgcgcgaaga aaaacgcgcg ccgacgaaaa tattgcttac cgccgccaac caaagctcac
     1501 tgcgccggcg cgccgacgcg gaggtgaatg gccaacgcaa ttatgttttg agtttcatcg
     1561 acaatcacga cgaatttcat ctttacatcg acgctcagac tcatttaccc acccaggtcg
     1621 acatactcga agacgatccg ctcgaaggcg acagcagcta tgttttgcgc tatggcgatt
     1681 ggcgcaagag tggcgcggtg atgctgccgt tcagtctgcg caccgaactc aatggaaagc
     1741 ctctgcaaga ggaacagatc aagtccatcc agcataatct cagctacgct gccgacccat
     1801 ttgccatcgc gccagaag
//
LOCUS       DATIRS010000838         2152 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1340644, whole genome shotgun sequence.
ACCESSION   DATIRS010000838 DATIRS010000000
VERSION     DATIRS010000838.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2152
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1340644"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..545
                     /gene="istB"
                     /locus_tag="VLM90_10610"
     CDS             <1..545
                     /gene="istB"
                     /locus_tag="VLM90_10610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007539334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IS21-like element helper ATPase IstB"
                     /protein_id="HSQ13465.1"
                     /translation="RHQAAPEDVDYRTERGLDRALFVKLIAGDWIDAHDNLAICGPSG
                     VGKSWLACALGHKACRDDRSVLYQRVPRLFANLALARGDGRYARLQRTLARVQLLILD
                     DWGLEPLDDQARHDLLEILEDRYGRRSTIITSQLPVSAWHNVIGNPTYADAILDRLVH
                     NAHRIDLTGESMRRKQLQKA"
     gene            complement(607..1756)
                     /locus_tag="VLM90_10615"
     CDS             complement(join(607..1294,1293..1756))
                     /locus_tag="VLM90_10615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611739.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HSQ13466.1"
                     /translation="MAGRDIAVKKYVVRLSADERQQLEALIRKGKSEARLLLKARILL
                     KADVSEAGDGWSDSKIVEALETNALMVYRVRKQLVEEGFEAVLRRKPRATPAVPPIFD
                     GEKEAKLIALACSKPPKGRARWTLRLLENKVVELGIVDRASDSTIGRVLKKHSLKPHR
                     RQCWVIPPKANGAFVAAMEDVLAVYTRPYDPECPMVCLDETSKQLLCETRVPVPMKMG
                     RPARFDYEYERNGTANLFMLFAPLEGWRRVKVTDRHTAVDYAHLLKELADLDFPHAKT
                     IALVQDNLSIHAKASLYQAFPAAEARRLVERFQWHYTPKHGSWLNLAESELGILSSQC
                     LGRRIPDKQTLVEEIAAWQDDRNAHHAKADWRFTTIDARIKLKHLYPTI"
     gene            complement(1900..>2152)
                     /locus_tag="VLM90_10620"
     CDS             complement(1900..>2152)
                     /locus_tag="VLM90_10620"
                     /inference="COORDINATES: protein motif:HMM:NF013677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSQ13467.1"
                     /translation="IKSSVRQAGISEQTYYQWKRAVAPKLESGELKDLVALEEENTRL
                     KGLFAERLRKENAELKRKLGLDQYQDSVIRTHMPNLAGR"
BASE COUNT          414 a          670 c          603 g          465 t
ORIGIN      
        1 tgcgccacca ggccgccccc gaggacgtcg actatcgaac cgaacgcggc ctcgaccggg
       61 ccttgttcgt caagctcatc gccggcgact ggatcgacgc gcatgacaat ctggccatct
      121 gcggcccatc gggcgtcggc aaaagttggt tggcctgcgc gctcggccac aaggcctgcc
      181 gggatgaccg ctcggttctt taccaacgtg tcccgcgcct gttcgccaat ctcgcactcg
      241 ccagaggcga tggtcgatac gcacggctgc agcgcacgct cgcccgcgtt caactgctga
      301 tcctcgacga ctggggcctt gaacccctcg acgaccaggc gcgtcacgat ctcctcgaaa
      361 tcctcgagga ccgctatgga cgccgctcca ccatcatcac cagccaactg cccgtgtcgg
      421 catggcataa cgtaattgga aatccgacct atgccgacgc catcctcgac cggctcgttc
      481 acaatgccca tcgcatcgat ctgaccggcg aaagcatgcg tcgaaagcag ctgcaaaaag
      541 cttgacacca aaagccaacg aaatgacaac aaacattgcc agcaaagccc tagtcgcccg
      601 attcagtcag attgtagggt atagatgctt gagtttaatt cgagcatcta ttgtggtgaa
      661 ccgccaatcg gctttggcgt ggtgagcatt gcggtcgtcc tgccaagcgg caatttcttc
      721 gaccaaggtt tgcttgtcgg ggatacggcg gccgaggcat tgggacgaca ggatgccgag
      781 ttcggattcc gccagattaa gccagctgcc atgcttgggg gtgtagtgcc attggaagcg
      841 ttcgaccagc cgcctggctt cggccgccgg aaaagcctgg tagagtgacg ccttggcgtg
      901 gatgctgaga ttatcctgca ccagcgcaat ggttttggcg tgggggaaat cgaggtcggc
      961 caattccttc aggaggtgag cgtagtccac agcggtatgg cgatccgtga ccttgacgcg
     1021 ccgccagcct tcgagcggcg cgaacagcat gaagaggttg gcggtgccgt tgcgctcgta
     1081 ttcgtaatcg aaccgggccg ggcgtcccat cttcatcggg accggcacgc gcgtctcgca
     1141 gagcagttgc tttgaggtct catccagaca aaccatcgga cactccggat cgtatggccg
     1201 cgtgtagacg gccagcacgt cttccatggc ggccacgaac gcgccgttag ccttcggcgg
     1261 aatgacccag cactggcggc gatgcggctt gagagtgttt ttttaaaacc cgaccgatcg
     1321 ttgagtcgct ggcgcgatca acgatgccga gttccaccac cttgttctcc agcagccgca
     1381 aggtccagcg ggcgcggccc ttgggcggtt tggaacaggc cagagcgatc agtttggctt
     1441 ccttctcgcc gtcgaaaatc ggcggcacgg ccggcgtcgc gcggggcttg cggcgcagca
     1501 ccgcctcaaa tccctcttcc accagttgtt ttcgcacccg gtaaaccatc agggcgttgg
     1561 tctccaaagc ctcgacgatc ttgctgtcac tccagccgtc gccggcttcc gaaacatccg
     1621 ccttcaacaa gatccgcgcc ttcaacagca ggcgcgcctc actctttccc ttccggatca
     1681 gcgcttcaag ctgttggcgc tcatctgcgc tcagccgcac cacatacttc tttaccgcaa
     1741 tgtcccttcc agccatgctc gcctccgtcg ttcgatgcga tcacagcgaa tcatcaaacc
     1801 cttacgaatt ggttgaagcg agcgactagt gcccgtccat aaaggccgtt ttttgtagta
     1861 gattcaagat tgtatgtggc tgaggccgga agatcatgtc tatcggcctg cgagattggg
     1921 catatgcgtt ctgatcactg aatcttggta ttggtcgagc ccaagcttcc tcttgagttc
     1981 tgcgttctct ttgcggaggc gttccgcaaa gagacccttt agccgcgtgt tctcttcctc
     2041 aagcgcgacg aggtctttca gctcaccgct ctcgagcttt ggcgccacag ccctcttcca
     2101 ttgatagtac gtctgttcgg aaatgccggc ctgtctcacg gaactcttga tg
//
LOCUS       DATIRS010000839         2640 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1242769, whole genome shotgun sequence.
ACCESSION   DATIRS010000839 DATIRS010000000
VERSION     DATIRS010000839.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2640)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2640)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2640
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1242769"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1281
                     /locus_tag="VLM90_10625"
     CDS             <1..1281
                     /locus_tag="VLM90_10625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13468.1"
                     /translation="TSIVQPHKRDAGLVTINQVSDNHGGEFAGQIKQTVRFENAASAL
                     AATPPLGDFKVVSEDGAQKRTLLDFMPRLPADSADARAFRNAAKEQQAYLQNAFMSLI
                     TSPPPVRMNLGDTKAQLLHSVNPEKTINTRVQASLILAGGTEPRGDPLEPILEAPDFP
                     QPMYEAIRDLSQEFLFPGLQQVPANTVTLLETNAKFVEAFLVGLNAEMSRELLWRNYP
                     TDQRGTYFRQFWDTSAGNDQPDIARINQWRDRKLGDNAGAGEQLVLLIRGELLRRYPN
                     SVIYAVAAKREQGQLELSDPAVESHPIFRGTLKPDVTFLGFALTDKEAIADPGWFFVI
                     QQQPTEPRFGMDVANFAKPLPALATWNALSWRHLANTEEELKSLSHASAKTVLPDVDK
                     AKWGRNSAHQAYITLQRPVRIAIHAQEMILQGST"
     gene            1285..>2640
                     /locus_tag="VLM90_10630"
     CDS             1285..>2640
                     /locus_tag="VLM90_10630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13469.1"
                     /translation="MPTANPAIPNIPNTAEVAMQLSFGAARPVVLFPVRLETRFFALA
                     DGSSELRVRVYPDAVHIDSHEAELTADELTWGRHFWEQTWRAADDEERGKTAWRQLAD
                     RFDPPRAAWIARALKPLNPEVRPATPLAADQPLAKPARFPSAATKSETWTRAPAARGL
                     SNQWILLGYKNGRLVVNVKGGLIADTLATGPDPSPSANADPLGIDAGMKWMVDFDAAE
                     NVGMGIRAKLTSAAAAAGLDFVLVLGIKDSLDRLTDWAPNLAQLFNAHHYTDGLSFVP
                     QGTPSNNTADAPSGFSSNDPGHEASYRAERAIPPFQSGDGSNADVLTSALGLAHVGEI
                     FANLANATAKEQLDGRHMNTALWPATWGYFLLQMLGVGAAGESPLSDDDIAWARSHFI
                     EWVRASGPLPALRIGKQPYGILPVTSLNAWQPPADQSGQFNRDVALRDVLIPLRDLWR
                     RN"
BASE COUNT          519 a          850 c          797 g          474 t
ORIGIN      
        1 acatcgattg tccagccgca caagcgcgac gccggcttgg tgacgatcaa ccaggtttcg
       61 gataatcacg gcggcgaatt cgcggggcaa ataaagcaaa ccgttcgttt cgaaaatgcc
      121 gccagcgcgc tcgccgccac gccgccgctg ggcgatttta aagttgtctc cgaggacggc
      181 gcgcagaaac gcaccctgct ggacttcatg ccgcggctgc ctgccgacag cgccgacgcg
      241 cgggcgtttc gcaatgcggc gaaagaacag caggcttacc tgcagaatgc gttcatgtct
      301 ttgatcacct ccccaccccc cgtgcggatg aatctcggcg acaccaaggc gcagctgctg
      361 cacagcgtca atcccgagaa gaccatcaac acgcgggtcc aagcttcgct gatcctagcc
      421 ggcggaacgg agccgcgtgg cgatcccctc gagcccattc tcgaggcgcc cgattttccc
      481 caaccgatgt atgaagcgat acgcgacctg tcgcaggaat ttctcttccc cggtttacag
      541 caggtgccgg cgaacaccgt cacgttgctc gagaccaacg caaaatttgt cgaagcgttt
      601 ctggtcggac tcaatgccga aatgagccgg gaactgctct ggcgcaatta tccgaccgat
      661 cagcgcggca cttattttcg ccagttctgg gatacatcgg ccggcaatga tcaaccggat
      721 atcgccagga tcaaccaatg gcgcgaccgc aagctcggcg acaatgccgg cgcgggcgaa
      781 caactggtgc tgctgattcg cggcgagctg ctgcgacgct atccgaactc ggtcatctac
      841 gcggtggcgg cgaagcgcga acaaggtcag cttgagctgt ccgatccggc tgtggaaagc
      901 catccgatct ttcgcggcac cttgaaaccc gacgtgacgt ttttgggttt cgccttgacc
      961 gacaaagaag ccatcgccga ccccggctgg ttcttcgtca tccagcagca gccgaccgag
     1021 ccgcgcttcg gcatggacgt cgcgaacttc gcgaaaccgc tgccggcgtt ggcgacgtgg
     1081 aacgcgctga gctggcgcca tctggccaac accgaagaag aattaaagtc actgtcgcac
     1141 gcctcggcca aaacggtgtt gccggacgtc gacaaggcga agtggggcag gaactccgcg
     1201 caccaggctt atatcacgct gcagcggccg gtgcgcatcg cgattcatgc gcaagaaatg
     1261 attctccaag gctcgacgtg actcatgcct actgccaacc ctgcgattcc caacattccg
     1321 aacacagccg aagtggcgat gcagttatcg ttcggtgccg cccggccggt ggtgctgttc
     1381 ccggtgcggt tggaaacgcg gttttttgcg ctcgccgacg gcagctccga gctgcgcgtg
     1441 cgcgtgtacc ccgatgccgt gcacatcgat agccacgagg ccgagctgac cgccgacgag
     1501 ctgacctggg ggcgccattt ctgggaacag acttggcgcg ccgccgacga tgaagaacgg
     1561 ggaaaaaccg cttggcgcca gttggctgat cgtttcgatc cgccgcgcgc cgcctggatt
     1621 gcccgcgcgc tcaaaccgct gaatcccgaa gtgcgcccgg caactcctct cgccgccgat
     1681 cagccgttgg cgaaaccggc gcgatttccg tcggccgcga ccaagagcga gacctggacg
     1741 cgcgccccag cggcgcgcgg gttgtcgaac caatggatcc tgctgggtta caagaacggc
     1801 cggctggtcg tgaacgtcaa aggaggattg attgcagata cgctggcaac cggccccgac
     1861 ccctcgccat cggccaacgc cgatccactc gggatcgacg ctggcatgaa gtggatggtg
     1921 gatttcgacg cggcggaaaa cgtcggcatg gggattcggg caaaactcac aagcgccgct
     1981 gccgcggcgg ggttggactt tgtcctggtg ctgggtatca aagattccct cgatcggctg
     2041 acagattggg cgcccaatct ggcgcagtta ttcaacgcgc accactacac cgatggactg
     2101 agctttgtgc cgcagggcac tccttccaac aacacggcgg atgcgccttc cggcttcagc
     2161 tccaacgacc ccggccatga agcgagctat cgcgccgaac gcgccatccc gccatttcaa
     2221 tccggtgacg gctccaatgc cgatgtgctg accagcgcct tgggactggc gcatgtcggt
     2281 gagatttttg ccaacctggc caatgccacg gcaaaggagc agctcgacgg gcgccacatg
     2341 aacacggctt tgtggccggc gacatggggc tacttcctgt tgcagatgct cggcgtcggc
     2401 gccgccggtg aaagcccgct cagcgacgac gacatcgcct gggcgcgcag ccatttcatc
     2461 gagtgggtgc gcgccagcgg gccgctgccg gcgttgcgca tcggcaagca gccctatggc
     2521 attcttcccg tgacctcgct caacgcttgg cagccgccgg ccgatcaatc gggtcaattc
     2581 aatcgcgacg tcgcattgcg cgatgttctg atccctctac gagacctatg gcggcgcaat
//
LOCUS       DATIRS010000840         1637 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1929507, whole genome shotgun sequence.
ACCESSION   DATIRS010000840 DATIRS010000000
VERSION     DATIRS010000840.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1637
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1929507"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..383)
                     /locus_tag="VLM90_10635"
     CDS             complement(<1..383)
                     /locus_tag="VLM90_10635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13470.1"
                     /translation="MRRISYLFPVVLVGAATLLPLPGASQEFKPSKQIETVVHTGPGG
                     GSDLFARAIAEMLQKEKLIAQRMQVVNKSGGGPAVAMAYLAEKKADTHTVGFYTGVWV
                     TNPLTTVEATVTLKDLTPISRLVLEP"
     gene            complement(420..>1637)
                     /locus_tag="VLM90_10640"
     CDS             complement(420..>1637)
                     /locus_tag="VLM90_10640"
                     /inference="COORDINATES: protein motif:HMM:NF014073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HSQ13471.1"
                     /translation="QMARNGRAGAALGISAIASFVAGTVGVLGLMLIAPPLARFALRF
                     APPEYFALMVLGLAMVVFLAGDSMVKALLALLVGLWLATIGTDLFTADSRFTFGQAKL
                     LGGVDFIAATVGIFAVGEVLVNLESRAGGEIVKLPRGIRNLLPTLQDLKDCRFAFVNG
                     SLIGFFVGALPGAGATVASFLSYGLEKAVSRHPEKFGTGVIEGVAAPEGANNADAGGA
                     LVPLLTLGIPGGNTTAILLGGLILWGYKPGPLLIQEHPQLFWGLVASMYVGNFLLLVL
                     NLPLVPLFAQILRLPSYVLHPFIIGISVVGVYSVNNSLFDVWMMALFGLLGYLMRKLD
                     FPAAALILGLVLGDVLERALRQSLMMSQGDLAIFVNRPISATLLAIAVVLLCLPALRW
                     VRAWRADAVEREG"
BASE COUNT          395 a          483 c          469 g          290 t
ORIGIN      
        1 ggctccaaaa ccaaacggct aatcggtgtc aagtctttca acgtcactgt cgcttcaacc
       61 gtggtcaacg gattagtcac ccagacaccc gtgtaaaagc caacggtgtg ggtgtcggcc
      121 tttttctcag cgaggtaagc catagcgacg gccgggccgc ccccggattt gttgaccacc
      181 tgcatgcgct gggcaatcaa tttttctttt tgcagcattt cggcgatggc acgggcgaaa
      241 agatccgagc ctccgccggg gccggtgtgg accacggttt caatctgttt gctcggtttg
      301 aattcctggc ttgcgccggg aagcggtaat agcgttgcgg caccaactag cacgacgggg
      361 aataaatagc tgattcgtct catcggtggg gctccttcct ctttggctga cagtttcttt
      421 taaccttccc gttccaccgc atcggcacgc caagcgcgta cccagcgcag cgcgggaaga
      481 cacaatagca ctacggcaat cgccaacaag gtcgccgaga tcggccgatt tacaaaaatc
      541 gccagatcgc cctgggacat cattaatgac tggcgcagcg cccgttccag tacatcgccc
      601 aaaaccagac ctaagatcaa tgccgcggcc gggaaatcga gcttgcgcat taaatagccc
      661 aagagaccga acagtgccat catccagaca tcgaaaagac tgttattgac gctatagacg
      721 ccgaccacgg agatgccgat gatgaacgga tggagcacat agctgggcag acgtaaaatt
      781 tgcgcgaaca gcggcaccag cggcagattg agcaccaaga gcaagaagtt gcccacatac
      841 atgctcgcga ccagtcccca aaacagttgc ggatgttcct ggatcagcag cggcccgggt
      901 ttgtaacccc ataaaatcag tccaccgagc aagatcgccg tcgtgttacc gccgggaatg
      961 cctaaagtca gcaagggcac cagtgcgccg ccggcatcgg cgttgttggc gccctcgggg
     1021 gcggcgaccc cttcgatgac gccggtgccg aatttttccg gatggcgcga taccgccttt
     1081 tccagaccgt aggataagaa ggatgcgacc gtggcaccgg cgccgggtag cgcgccgacg
     1141 aaaaagccga ttaaagaacc gttgacaaaa gcgaagcggc agtccttgag atcttgcagc
     1201 gtcggcaaca gatttctaat tcccctgggt agtttgacga tctcgccgcc ggcgcgggat
     1261 tctaaattga ccagcacttc accgacggcg aagatgccga ccgtggcggc gataaaatcg
     1321 acgccgccaa gcagttttgc ctgaccgaag gtgaagcgcg aatcggcggt aaacaaatcc
     1381 gtgccgatgg tggcgagcca caaaccgaca agcagcgcca acagggcttt gaccatcgaa
     1441 tcgccggcga gaaataccac catggcgaga cccaggacca tcagggcgaa atattccggt
     1501 ggggcgaaac gcaatgcgaa acgcgccagc ggcggcgcga tcagcatcaa tccgagcacg
     1561 ccgacggtgc cggcgacaaa cgaagcgatg gcggagattc ccaacgcggc gccggcccgg
     1621 ccgttgcgcg ccatctg
//
LOCUS       DATIRS010000841         2439 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_61851, whole genome shotgun sequence.
ACCESSION   DATIRS010000841 DATIRS010000000
VERSION     DATIRS010000841.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2439)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2439)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2439
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61851"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(199..2061)
                     /gene="uvrC"
                     /locus_tag="VLM90_10645"
     CDS             complement(199..2061)
                     /gene="uvrC"
                     /locus_tag="VLM90_10645"
                     /inference="COORDINATES: protein motif:HMM:NF001824.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HSQ13472.1"
                     /translation="MNGLTEKLASLPSRSGVYLMRETGGKVIYVGKAKDLRARVRAYF
                     NHSDERSQIQFLVRRVADIETLVTSNDKEALILENNLIKQYKPRYNIRLKDDKSYLSI
                     KVTTQHAWPRILATRKIVKDGNRYFGPFSSALAARETIDIIEKHFQLRTCTDHNFRNR
                     SRPCLQYQIKRCLGPCVLPVAPDVYREQVRQTLLFIDGRQQELIDELKQRMLEKADAL
                     VFEAAARIRDQIQAVEKTLEKQRMVAHWGSDQDIFGLYREGGFIEVQVLLVRQGKLTG
                     SQSYALADLEFPDDEILGSLLTQFYQGQRFGPDEILLPVELDDAAVREEYLAEHKGKS
                     VKILCPQRGDKRHLVEMAIDNAKQSFADRHDQEKAREKMLHELQNSLRLRNYPHRIEC
                     FDISMIHGAHAVGSMVTFVEGEPDKNLYRHFRIKTIGAESGGDDFGMMLEMLTRRFSR
                     GKAEADLPDLIVVDGGKGQLAMALAAMAEVGIDGVEAVGLAKMRVQAAPRSAEIERSE
                     ERVFLPGQTNPVILRRNSNALFLLQRVRDEAHRFAITHHRKLRSQQTLYSALDRIPGV
                     GGVRKRALLRAFGSIKRIEAASLEDLLKVPSMNEKLAQQVLDALRGRADSEYLP"
BASE COUNT          470 a          728 c          701 g          540 t
ORIGIN      
        1 aattttagcg tcttcaacac tagcgacttc atgcgcgcaa cagtgttcac cacgaaggac
       61 acgaaggttc ggaagttcag tctcttcctt cgtgctcttc gtgttcttcg tggtgagtgg
      121 tctcctccga attttgcgca ctttgggttt tttgcggcca ttcttcttct cggttgcggc
      181 tgcgccgcgc tgggttcttt acggcaaata ctccgaatcc gcacggccgc gcagggcgtc
      241 gagcacttgc tgggcgagct tttcattcat cgacggaacc ttcaggagat cctccagcga
      301 tgctgcttcg atgcgtttga tgctgccgaa ggcgcgcagc aaggcgcgct tgcgcacgcc
      361 gccgacgccg gggatgcggt cgagagcgga gtagagcgtc tgctgcgagc gcaatttccg
      421 atgatgggtg atggcgaagc gatgggcttc gtcgcgcacg cgctgcagca gaaacaacgc
      481 gttggagttg cgccgcaaaa tcaccggatt ggtttgaccc ggcaggaaca cgcgctcttc
      541 cgagcgctcg atctcggcgc tgcgcggcgc tgcttgaacc cgcatcttgg ccaagcccac
      601 cgcctcgacg ccgtcgatgc cgacttcggc catggccgcc aaagccatgg ccaattgccc
      661 cttgccgcca tcgacgacga tcaagtccgg tagatcggct tctgccttgc cgcggctgaa
      721 gcggcgtgtg agcatctcca gcatcatgcc gaagtcatcg ccgccggact ccgcgccgat
      781 ggtcttgatg cgaaaatggc ggtaaagatt tttgtccggt tcgccttcga cgaacgtcac
      841 catggagccc accgcatggg cgccatggat catcgagata tcgaagcatt cgatacggtg
      901 cggatagttt ctcaagcgca gcgagttttg cagctcatgc agcattttct cgcgcgcctt
      961 ttcttgatcg tggcgatcgg caaaactttg cttggcattg tcgatcgcca tctcgaccaa
     1021 gtggcgctta tctcctcgtt gggggcagag aatcttgacg ctcttgcctt tatgctcggc
     1081 gagatactct tcgcgcacag ccgcatcgtc gagttccacc ggcaggagaa tctcgtcggg
     1141 accaaaacgc tggccttgat agaactgggt gagcagcgag cccaggatct catcgtcggg
     1201 aaactctaaa tccgccaacg cataagactg gctgccggtc aacttgccct ggcgcaccag
     1261 cagaacctgg acttcgataa aaccgccctc gcggtacagg ccgaaaatat cctggtcgct
     1321 gccccagtgc gccaccatgc gctgtttctc caaggtcttc tcgaccgcct ggatctgatc
     1381 gcgaatccgc gccgctgcct cgaacacgag cgcgtcggcc ttctccaaca tgcgctgctt
     1441 caactcgtcg atcagctctt gctgccgccc gtcgataaat agcagggtct ggcgcacctg
     1501 ctcgcggtaa acatccgggg ccaccggcag cacgcagggc cccaggcatc gcttgatctg
     1561 atactgcaag cagggccggc tgcggttgcg aaaattgtgg tcggtgcagg tacgcagctg
     1621 aaagtgcttc tcgatgatgt cgatggtctc gcgcgccgcc agcgccgagg agaacggccc
     1681 gaagtagcgg ttgccgtcct tgacgatctt gcgcgtcgcc aggatgcgcg gccaggcatg
     1741 ctgggtggtg accttgatgc tcaaataact cttgtcgtcc ttgaggcgaa tgttgtagcg
     1801 cggcttgtac tgcttgataa gattgttttc gaggatcagc gcttccttgt cgttgctcgt
     1861 gaccagggtt tcgatatcgg cgacacgccg aaccaagaac tggatctgcg agcgctcgtc
     1921 ggaatggttg aagtaggcgc gcacccgcgc ccgcaggtcc ttggccttgc cgacgtagat
     1981 gactttgccg ccggtttcgc gcatcagata aacgcccgac cgggacggca aactagcgag
     2041 cttttcagtc agtccattca cggcgcgatc cgcggtttca atggcgagct gcgctccggc
     2101 ctgcgcttcg gaaagaacaa gagagtcagg ccagacgaca ccgccgcacg ctgccgccaa
     2161 acgccggcga ggaacaaaat caccggccct gacaaattgc tacctggcgt tactaaggat
     2221 gcggcaacac atcgttggca taacttttga gtcataacct gggttaatca cgcagatttc
     2281 gccacagtcc agggacggag gaacgctatg ttcgacatcg acaatctaat gcagttggga
     2341 gttttcagtc agctcatacc catctggcaa gtgttcttct tcatcgccgg actgttaccc
     2401 ttcctgctca tggaccgggt caagatttgt ctgctaata
//
LOCUS       DATIRS010000842         1555 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1538005, whole genome shotgun sequence.
ACCESSION   DATIRS010000842 DATIRS010000000
VERSION     DATIRS010000842.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1555
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1538005"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            436..>1555
                     /gene="rlmD"
                     /locus_tag="VLM90_10650"
     CDS             436..>1555
                     /gene="rlmD"
                     /locus_tag="VLM90_10650"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: protein motif:HMM:TIGR00479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HSQ13473.1"
                     /translation="MEKRFFKPRPQNARHGRVEPADGAERGPYQAPCRHYPNCIGCPF
                     IDLPYPEQLVRKRTLVGEAFGKVAALKDIQIPEVVPSPRRLGYRARVKLVVRKSGGTI
                     ATGLYVPQTHRVMDISSCPVHPRRVNQVLEYLKFRALELGIVPYDERDDSGDLRYVDF
                     RYSFARQEVSVTLVSRHPVLPKGEMLARALQRKFSFVTGVILNINENRGNVIWGAVNR
                     MLSGRETLLEQIGGLKLVYPAGVFSQSNPHTAQKLYDHVIELAQLTGKESVLDLYCGV
                     GPISLNLAPGARQVWGIDDNEAGITTAKQNARRNGVGNSRFFAGDAAAMVQQLRGQLI
                     PLDLIVANPPRKGFQAAALAAVLELRAPKLIYVSCEPTS"
BASE COUNT          313 a          452 c          471 g          319 t
ORIGIN      
        1 aacgacaccg gcgaggacaa tgccgatgcc catatcaagc gccaggtgat gggccgtgaa
       61 gtggtggtgg cgatcaccga tggcaagctc gacttcggtc cgtgggagca gattttttac
      121 ggcgagttcg atggccggcg caaaaagcgc gttttggtta agattatcgg cgagtaactg
      181 aatgacccgc ggcgatcagc cgatgggttc ttaattcggc gactggaagt caactcttcg
      241 tccgtcattc cggcgcaggc cggaatccag tcttttgtac tggaactgaa atcgaacctg
      301 gatgccggcc tgcgccggca tgacaaatcc actatccgct tgaaggcgag ggaattcgac
      361 cgtctccgag agagacacca ggtgattacg cttggcatat ttgatcggtg acgacttgac
      421 cgatagagtg cgcggatgga aaagcgattt tttaagccgc gaccgcaaaa tgctcgccac
      481 ggtcgggttg agccggcgga tggggcggag cgcggcccct accaggcgcc atgccggcat
      541 tatcctaact gtatcggttg tccatttatc gatctgccct atcctgaaca gctcgttcgt
      601 aaacgcacgc tagttggcga ggcgtttggt aaggtcgccg cgttgaagga tattcagatt
      661 cccgaagtcg tgccgtcgcc gcggcgtctg ggttatcgcg cgcgggtcaa gctggtggtg
      721 cgcaagagcg gcggaaccat tgcgaccggg ctctacgtgc cgcagacgca ccgggtgatg
      781 gatatctcgt cgtgcccggt gcacccgcgc cgggtcaatc aagtcctgga gtatctcaaa
      841 tttcgcgcgc tggagttggg gatcgttccc tacgacgagc gcgacgacag cggcgatcta
      901 cgctacgtcg actttcgtta cagctttgcc cggcaggaag tcagtgtgac gctggtcagc
      961 cgccacccgg tattgcccaa gggtgaaatg ctggcgcggg cattgcagcg taaattctca
     1021 tttgtcaccg gcgtgatcct caatatcaat gaaaaccgcg gcaacgtcat ctggggcgcg
     1081 gtcaaccgca tgctctccgg ccgtgaaacc ctgttagaac aaattggcgg cctcaagtta
     1141 gtctatcccg ccggggtatt ttcccagtcc aatccgcaca ccgcgcaaaa actctacgat
     1201 catgtgatcg agttggcgca gctcaccgga aaagagtcgg tgctcgatct ttactgcggc
     1261 gtcgggccga tctcgctcaa tctcgcgccc ggagcgcgcc aggtctgggg catcgacgac
     1321 aacgaagccg gcatcaccac ggcgaagcaa aatgccaggc gcaacggcgt cggtaacagc
     1381 cgcttcttcg ccggcgacgc cgcggcgatg gtgcagcagc tgcgcggcca attgattccg
     1441 ctcgatctga tcgtcgccaa tcccccgcgc aaaggtttcc aggccgctgc tcttgctgcc
     1501 gtgctggaat tgcgcgcgcc gaagctcatc tacgtctcct gcgaaccgac cagct
//
LOCUS       DATIRS010000843         1743 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1145024, whole genome shotgun sequence.
ACCESSION   DATIRS010000843 DATIRS010000000
VERSION     DATIRS010000843.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1743
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1145024"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..299)
                     /locus_tag="VLM90_10655"
     CDS             complement(<1..299)
                     /locus_tag="VLM90_10655"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSQ13474.1"
                     /translation="MAAVAAQNVTKIFGQGDGRVVALKDAQLSIEPGEIVALIGPSGS
                     GKTTLLRALSLIDPPTAGQIAIDNQVVFDGERVLTDDRKLRRQRMGIIFQAYNLIP"
     gene            complement(299..1495)
                     /locus_tag="VLM90_10660"
     CDS             complement(299..1495)
                     /locus_tag="VLM90_10660"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSQ13475.1"
                     /translation="MNLAIRDVKYRLGRFILTAIGVGLLLGTVMAMGGIYRGMVEDAL
                     SIVRAPGADLWVVQKDTNGPFAENSRIPDDLYRVVRAVPGVREASPIAFQSVQLEYGS
                     TSIRTQIIGYRLCKVGGPPAVSAGRPLAASRFEMVLDRKAGIPIGTRIPMGRIIFTVV
                     GLTEGIVSSSGDSTAYVSLQDAQELQFVKANEAVRNERARLQADLNANPALAAVSVTA
                     LASITQNTHLANAILVRLEPWADAKEIAARIERWNHYRAMTTVEQEEVLAKNVIERAR
                     QQIMLFRIILLMVSTVVIALIIFTMTMEKTRDIATLKIIGAPNLKIGALIMQESLSLG
                     LLGYLFGELLINLTYDYFPRRVAILAFDQSILFGIVIVICVLASLLGIRRALAIDPTT
                     AMGGGA"
     gene            complement(1492..>1743)
                     /locus_tag="VLM90_10665"
     CDS             complement(1492..>1743)
                     /locus_tag="VLM90_10665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13476.1"
                     /translation="LAAVVQSSKGAGAWTVVDGRMRFRRARLGIVDPAGWIEVIEGFT
                     GGEQVMVAPGKLADLKNEGRRVAGATQRSDAIAAAKQKP"
BASE COUNT          363 a          569 c          483 g          328 t
ORIGIN      
        1 ggaatcagat tgtaagcctg aaagatgatc cccatgcgct ggcgccgcag ctttcggtcg
       61 tcggtcaaaa cccgctcgcc gtcgaacacc acttgattgt caatcgcgat ctgtccggcg
      121 gtcggaggat cgatcagcga aagcgcgcgc agaagcgttg tcttgcccga tccgctcggc
      181 ccaatcagcg cgacgatctc gcccggttca atcgacagct gcgcatcctt gagcgcgacg
      241 acccggccgt ctccttggcc gaaaatcttg gtgacattct gcgccgccac cgcagccatt
      301 atgcgcctcc tcccatcgcc gtcgtcgggt cgatagcgag ggcgcggcgt atgcccagca
      361 ggctcgccag cacacagatg acgatgacaa tgccgaacag gatggattga tcgaaggcca
      421 ggatggcgac acggcgcggg aaataatcat aagtcagatt gatcagcagc tcgccgaata
      481 gatagcccag cagccccaga ctgagcgact cctgcatgat caaagcgcca atttttagat
      541 tcggcgcacc gataattttg agcgtggcga tatcgcgagt cttctccatg gtcatcgtga
      601 aaatgatcag cgcgatgacc acggtggaga ccatgagcag gatgattctg aagagcatga
      661 tttgctggcg cgcccgttcg atcacgttct tcgccagcac ctcttcctgc tccaccgtgg
      721 tcatcgcccg gtaatgattc cagcgctcaa tgcgcgcggc gatctccttg gcatcggccc
      781 agggctcaag ccgcactaga atagcattcg ccagatgggt gttctgggtt attgaagcga
      841 gcgccgtcac cgaaacggcg gcaagcgccg gattggcatt caaatccgcc tgcaagcgcg
      901 cccgctcatt gcgcaccgcc tcattggctt tgacaaactg cagctcctgg gcgtcctgca
      961 acgaaacata cgcggtcgaa tcgccggagc tggagacgat cccttcagtc agaccgacca
     1021 cggtaaagat tatccggccc atgggaatgc gcgtgccgat gggaatcccg gccttgcgat
     1081 ccagtaccat ctcgaaacgg ctcgcggcca gcgggcggcc agcggaaacg gccggcggcc
     1141 cgccgacttt gcaaagccgg taaccgatga tttgggtgcg aattgaagtg gacccgtatt
     1201 cgagctgaac cgactgaaac gcaatcgggc tcgcttcgcg cacgcccggc acggcgcgca
     1261 ctacccgata aagatcgtcc ggaattcgcg agttctcggc gaacggaccg ttggtgtctt
     1321 tctgcaccac ccacagatcg gcgccgggcg cgcgcacgat gctgagcgca tcttccacca
     1381 taccgcgata aatgccgccc atcgccatga ccgtcccaag caacaacccg acaccgatgg
     1441 cggtcaggat aaacctgccc aagcgatatt ttacgtcgcg aatggcgagg ttcatggttt
     1501 ctgctttgct gccgcaatcg catcagacct ctgagtagcg ccggcgacgc ggcgcccctc
     1561 gttcttcaga tcggccagtt ttcccggcgc gaccatcact tgctccccgc cggtaaatcc
     1621 ttcgatgact tcgatccacc ccgcgggatc gactatcccc aacctcgcgc gtcgaaagcg
     1681 catgcggcca tccaccaccg tccacgctcc cgcccctttt gacgactgca ccaccgcggc
     1741 caa
//
LOCUS       DATIRS010000844         1704 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1832824, whole genome shotgun sequence.
ACCESSION   DATIRS010000844 DATIRS010000000
VERSION     DATIRS010000844.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1832824"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..441
                     /locus_tag="VLM90_10670"
     CDS             <1..441
                     /locus_tag="VLM90_10670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13477.1"
                     /translation="PKERAEKFIRDLAAAKPIFAESIVPAADKVGTGETPIGITFVRF
                     VLTYNKQGASLDYVRDYRMLGDGQYISMAAKAPRTNAGKAFIDFFLDEESMKIQADTG
                     EFVNRKGVYPPLQDADKIKFVQMYQFTKEDYETKKKEYQKLFMQ"
     gene            613..1686
                     /locus_tag="VLM90_10675"
     CDS             613..1686
                     /locus_tag="VLM90_10675"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13478.1"
                     /translation="MAEFIIDADGHIMEDHKDIFAHIKGNFAEMNWHSTWPMFDADGW
                     QRGLARKGKREDPDAERWIKFQDEHGIDMAVLYPTSALALGMIQLAAWASALAQGYND
                     WLYDRFMSQSPRLKGVALLAPQDPKAAALELRRCVKELGFVAGLLPSATNNRTPLYGS
                     PLFHEIYDEAQRLDVPLTIHGGVSQNLGLDRVASFLEAHMLEHPVGLFLHITNMMFQG
                     VFQEFPKLRVAYLEAGAGWVPFMMDRMEEDYEKFAARLAPQLKHPPSHFFESGNIFVT
                     MEVEERTAPYVVKLLRDDVIMWASDFPHERERDQFGGDLPTLKARKDLTDEFKRKMLY
                     DNPVRFYRLSDGDIAAAPKAKEN"
BASE COUNT          421 a          511 c          452 g          320 t
ORIGIN      
        1 cccaaggaaa gagcagagaa atttattcgc gatttggccg ccgccaaacc gatctttgcc
       61 gaatccatcg tcccggccgc cgacaaagtt ggcacaggcg agacgcccat cggcatcacc
      121 ttcgtgcgct tcgtcctgac ctacaacaaa caaggcgcta gcttggatta cgtgcgcgac
      181 taccgcatgc tcggcgatgg gcagtatatt agcatggcag ccaaggcgcc gcgcaccaac
      241 gccggcaaag cctttatcga tttttttctc gacgaggaga gcatgaaaat tcaggccgac
      301 acgggcgagt tcgtcaaccg caagggcgtc tatccgccgc tgcaagacgc cgacaagatc
      361 aagttcgtgc agatgtacca gttcaccaaa gaagactacg aaaccaagaa gaaggaatat
      421 cagaaactct tcatgcagtg agttcaacca cggattcgga atagggacat ctcgccacga
      481 aggcacgaag atcgcgaagg taagataaga agcaggaaaa agttctccga acttcgtgtc
      541 cttcgtgcct tcgtggtgaa caaactcttc gctttacatc gacatatcag aatacattag
      601 gagacaacgc acatggcaga attcatcatc gacgccgacg gccacatcat ggaagaccac
      661 aaagacatct ttgcccacat caaaggcaac ttcgccgaga tgaactggca ctcgacttgg
      721 ccgatgttcg acgccgacgg ctggcagcgc ggcctggcac gcaaaggcaa gcgcgaagat
      781 cccgacgccg agcgctggat aaaatttcaa gacgagcatg gcatcgacat ggcggtgctc
      841 tacccgactt cggcgctggc gttgggcatg atccaactgg ccgcctgggc ctccgcgctg
      901 gcgcagggtt acaacgactg gctctacgat cgcttcatga gtcaatcgcc gcgcttgaaa
      961 ggcgtcgctc tgctcgcgcc gcaagatccc aaagccgccg cgctggaact gcgccgctgc
     1021 gttaaagaac ttggctttgt cgccggcctg ttgccgtcag ccaccaacaa ccgcacgccg
     1081 ctctacggtt cgccgctgtt tcacgaaatc tatgacgaag cgcaaagact cgacgtgccg
     1141 ctgacgatcc atggcggcgt cagccaaaac ttaggcctcg accgcgtcgc cagttttctt
     1201 gaagctcaca tgctggagca tcccgtcggc ctgtttctgc acatcaccaa catgatgttt
     1261 caaggcgtat tccaggaatt tcccaaattg cgcgtcgcct atttggaagc cggcgccggc
     1321 tgggtgccgt tcatgatgga tcgcatggaa gaggactacg aaaagtttgc cgcccgcctg
     1381 gcgccgcagt tgaagcatcc gccgagccat ttttttgaaa gcggcaacat cttcgtcacc
     1441 atggaagtcg aagaacgcac cgcgccctac gtcgtcaaac tgctgcgcga cgatgtcatc
     1501 atgtgggcct ccgatttccc ccacgagcgc gaacgcgacc aattcggcgg cgacctgccg
     1561 acgctaaaag cgcgcaaaga cctgaccgac gaattcaaac gcaaaatgct ctacgacaac
     1621 ccagtgcgat tttatcgctt gagcgacggc gatatcgccg cggcgccgaa ggcgaaggaa
     1681 aattgaacac tccgcgactg gtac
//
LOCUS       DATIRS010000845         2074 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_751677, whole genome shotgun sequence.
ACCESSION   DATIRS010000845 DATIRS010000000
VERSION     DATIRS010000845.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2074
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_751677"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1860)
                     /locus_tag="VLM90_10680"
     CDS             complement(<1..1860)
                     /locus_tag="VLM90_10680"
                     /inference="COORDINATES: protein motif:HMM:NF015714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HSQ13479.1"
                     /translation="MADQQDVAGLRSGDFHPSAWLIVPTLFLLLGQAIAAAPWDLPDS
                     SGLAVVPFVLLPFYRRWRRWVMLGLLITLAFSVGYVRHREILFPRFPDDHLRSVMLRH
                     ERVLIEGRLKAEPENLINRHRWSIRAERIWHATGAEEVSGDLQLSLRALRRDWRYGDR
                     IRFWLRPNLPQNSGNPGGFEYATYLAQRQIYVTGFLENDTEIELVAREPGLIRGAIED
                     IRRQIRRYIDANFAPDSGALMKALTVGEMGGISKEIRAAFTAAGVNHVLSISGLHVAM
                     LGVVIFAAIRYGLSFSSYLLLRFNLLKAATFFSFLAVVFYTALAGGMVPTVRSAIMIG
                     VYQLAVLLDREEEVFASLTLAALAIALVWPGVVADISFQLSFLAVLFIAWGMNRLHQG
                     LARERTEELPQEKSWIKERARQATFHMAVPLLATLGTGPLIAHYFGNLSLAGFVTNPL
                     IVPLVGFVIVPLGLTVGLVTLIASEFAWPLAWLGDRLAGWTIVIVEFFGSLPLASIRV
                     AAPNLLEVGALYAGVIALFVLRKRTQLLLAAGIFLLLSIGDVYYWRVQRFDSNQLRIT
                     HLNVGQGDAAVVEFPGGKVLVIDAGGAAVGDFDTGESIVAPYLRSRKILKVDYL"
BASE COUNT          507 a          646 c          575 g          346 t
ORIGIN      
        1 caggtaatcg actttgagaa ttttacgcga tctgagatag ggcgcgacga tgctttcgcc
       61 cgtatcgaaa tcgcccaccg cggcgccgcc ggcatcgatg accagaactt ttccgccggg
      121 aaattctacc acggcggcat cgccctgacc gacgttcaag tgggtaatgc gcagctgatt
      181 gctgtcaaac cgctggacgc gccaatagta aacatcgccg atcgatagaa gtagaaaaat
      241 tccagccgca agcaataact gcgtgcgctt gcgcaaaacg aatagagcga tcacgccggc
      301 gtaaagcgcg ccgacctcaa gcaggttcgg cgcggcgacg cgaatactcg ccagcggcaa
      361 actgccgaag aactcaacga taacaatcgt ccaaccggcg agccggtcgc cgagccaggc
      421 cagcggccag gcaaactcgc tggcgatcag agtcacaaga ccgacggtca aaccgagggg
      481 aacgatgacg aaaccgacca gcgggacgat caacggattg gtaacgaaac cggcgagcga
      541 gagattgccg aaataatgcg cgatcaaggg cccggtgccc aaggtagcca gcagcggcac
      601 cgccatatga aatgtcgcct gccgcgcccg ctccttgatc caacttttct cctgcggcaa
      661 ctcctcggtg cgttcccgcg ccagcccctg atggagccgg ttcatgcccc aggcgataaa
      721 cagcacggcg agaaaagaaa gttgaaacga gatgtcggcg accacaccgg gccagaccag
      781 ggcgatcgcc agcgcggcca aagttagact ggcgaacacc tcttcttccc gatccaacaa
      841 caccgccaat tggtaaactc cgatcatgat cgccgagcgt accgtcggca ccatgccgcc
      901 cgcgagcgcc gtataaaaca ccaccgccaa aaaagaaaaa aaagtcgccg ctttgagcag
      961 attgaagcgc agcagcaaat aactgctgaa cgacaagccg taacggatcg ccgcgaagat
     1021 caccaccccc aacatggcga catgcaggcc ggaaatcgac aacacatgat tgacgcccgc
     1081 cgccgtaaag gcggcacgaa tttccttgct gatcccgccc atttcgccca ccgtcaatgc
     1141 tttcattaga gcgccgctgt ccggcgcgaa gttggcgtcg atgtaacggc ggatctgccg
     1201 gcgaatgtcc tcgatggcgc cgcggatcag gcccggttcg cgggcgacta gctcgatctc
     1261 ggtatcgttt tctagaaacc ctgtgacata gatctgccgt tgcgctagat atgtcgcata
     1321 ttcgaagccg ccgggattgc cgctgttctg cggcaggttg ggacgcagcc aaaaacgaat
     1381 gcggtcacca taacgccagt cgcgccgtag cgcgcgcaag ctcagttgca aatcgccgct
     1441 gacttcctcg gccccggtgg catgccagat gcgttctgcg cgaatcgacc aacgatgacg
     1501 attgatcagg ttctccggct cggctttgag ccggccctcg atcaagaccc gctcatggcg
     1561 cagcatgaca gaacgcaaat gatcatcggg aaatcgcggg aaaaggattt cccgatggcg
     1621 cacatagcca accgagaagg ccagggtaat taacaacccg agcatcaccc agcgccgcca
     1681 gcgccggtaa aacggcagca gcacgaacgg caccacggcc aacccgctgc tatcgggcaa
     1741 atcccaggga gccgcggcga tcgcttggcc aagcagcaga aacagcgtcg gcacgatcag
     1801 ccaagccgac ggatggaagt ctccggaacg caaaccagct acgtcttgct gatccgccat
     1861 gttggctttc gcttcatgag gaacttcgcc ggttgaggcc accactcata acgattactt
     1921 gccaagggca accacgggag ttgccctaat aatccgactt tgtgaacttt gcgcggctcc
     1981 agttccttcg cctttgctca ggacagactt tgcggcaaat tctccgaatc cgcatggccg
     2041 cgcagggcgt cgagcacttg ctgggcgagc tttt
//
LOCUS       DATIRS010000846         5071 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1930020, whole genome shotgun sequence.
ACCESSION   DATIRS010000846 DATIRS010000000
VERSION     DATIRS010000846.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 5071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5071
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1930020"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..370)
                     /locus_tag="VLM90_10685"
     CDS             complement(<1..370)
                     /locus_tag="VLM90_10685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13480.1"
                     /translation="MTQAIPKGYFAKNIDAVGYHDLNGKPAFKLAMQEKNRRWYLYLA
                     HLWHRGWSVLDVTDPAAPQYCAYVPGPENTWTIQIQIADGKMIAGLERIAPGWGGADG
                     QPSEEGFFIFDVSAPTEPKQI"
     gene            complement(373..1029)
                     /gene="nth"
                     /locus_tag="VLM90_10690"
     CDS             complement(373..1029)
                     /gene="nth"
                     /locus_tag="VLM90_10690"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: protein motif:HMM:NF012933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0140078 - class I DNA-(apurinic or
                     apyrimidinic site) endonuclease activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HSQ13481.1"
                     /translation="MTEREIHAAVRILRREVPKWETPVVTLMAETYQSPFRVLISCIL
                     SLRTQDATTAKASHRLFAVADSPQAMVELTAKKIEKLIYPVGFYKTKARQIREMCQTI
                     IDRHSGKVPDEIDELLEFKGVGRKTANLVVTLGYHKPGICVDTHVHRISNRWGYIKTA
                     TPEKTEFALRAKLPKQYWIEYNNLLVNFGQHLCRPISPMCSHCPVKKYCPQLGVGVRR
                     "
     gene            1111..1686
                     /locus_tag="VLM90_10695"
     CDS             1111..1686
                     /locus_tag="VLM90_10695"
                     /EC_number="3.6.1.55"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005777 - peroxisome [Evidence IEA];
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003986 - acetyl-CoA hydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0008413 - 8-oxo-7,8-dihydroguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_function: GO:0010945 - coenzyme A diphosphatase
                     activity [Evidence IEA];
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0035539 - 8-oxo-7,8-dihydrodeoxyguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0009132 - nucleoside diphosphate metabolic
                     process [Evidence IEA];
                     GO_process: GO:0015938 - coenzyme A catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HSQ13482.1"
                     /translation="MVTDKVFSALISRTPEIVTGNGLKPAAVLIAIQERADGDYIVLT
                     KRGDNMPTNKGQIAFPGGRVHAGDADLVATALRESHEEIGVVPEHVRVLGRLDEFTAG
                     YGIVVTPVVGVIPPQYDFLLDLAETSAVASVPIRSLMEPGTYVKNAHLSPGGHPSYHF
                     YVNNGWDIWGVTARILVQFLELAYDFESEKK"
     gene            1661..2128
                     /locus_tag="VLM90_10700"
     CDS             1661..2128
                     /locus_tag="VLM90_10700"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSQ13483.1"
                     /translation="MILSLKRNSLALLLAAGLGLWSACVSGPHFYLQYGDEYRELDLE
                     KILADNPLAPGENIKVANLGRSASASQHIVQIRDREILHVHKLHDGTVTMLRDQGYLV
                     LADKRINLKVGDVIHIPRGVAHQYVNGASEATVVLAVYAPAFDGKDTHPVAIP"
     gene            2156..3670
                     /gene="lnt"
                     /locus_tag="VLM90_10705"
     CDS             2156..3670
                     /gene="lnt"
                     /locus_tag="VLM90_10705"
                     /inference="COORDINATES: protein motif:HMM:TIGR00546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006497 - protein lipidation [Evidence
                     IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HSQ13484.1"
                     /translation="MKLPNFLLPMLAAALLAAPFLEPWFFPLAWFAFVPLFWAIDRAK
                     SLRHAVLHGWLMGLVAHLIGFHWLTYTISVFGGLPFAVSCIVFVLYAALQGIQMALFA
                     LLVRSIGFGPLLIFPALFWVPLEFLFPLLFPWYIANSQVAFLWMIQTADLVGPYGTGF
                     IVMWFSAALYHALFTSAEPRKKILPLAYASLAIVVAVVYGFQRLQSVGDEIAGARKLS
                     VGVVQGNVDIDMKWNPVLAQKNLDQHRQLTNDLPAVPLVVWPESAIEAIIPERVQALP
                     LDVMPAFKSDRAYFIFGAKSFRGTPGRTDGKAFNTAFFTDSKGRILTRYHKQVLLAFG
                     EYLPFAKLLSWIPALPMADGFTPGPGPVVFHLPRAVRVAPLICYEDLLPDVVRKFVSE
                     TRANILINLTNDAWYGKSVGPWQHLRLAQSRAIETRRSLLRVTNTGVTSLVNAKGELV
                     KTLPMFTAAVMHTEVDILEETTYYVRFGDWFAWAMTIATLGIVLLRFKRAWKSA"
     gene            complement(3712..4860)
                     /locus_tag="VLM90_10710"
     CDS             complement(3712..4860)
                     /locus_tag="VLM90_10710"
                     /inference="COORDINATES: protein motif:HMM:NF025019.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4143 domain-containing protein"
                     /protein_id="HSQ13485.1"
                     /translation="MFKRQLSLPAPGTETFFLWGPRQTGKTTLLQTNYPDALWVDLLQ
                     ADEFRRYLHNPEILREQLAARPSVRQVVIDEVQKVPQLLDEAHWLHEHRKVRFALCGS
                     SARKVKRGQANLLGGRAVRYELHGLTARELAGEFNLKRILNHGYLPTIYLSDNPQPLL
                     NGYVADYLKEEVAAEGLVRNLPVFSEFLNIAVLSDAELVNFSTIARDCGVSSPTIKGY
                     FQILEDTLLGRWLPAYTRRPKRRVIGAPKFYFVDVGMVNHLARRGELQPGSELYGKAF
                     ENWLFHELTAHNAYSQAFAQISYWRLASGMEVDFIVNDMELAIEAKATAKINADHLRG
                     LRALKVDQPRVKQQIIVCLERTSRRTEDGIWILPATEFCDRLSGGTLF"
     gene            complement(4892..>5071)
                     /locus_tag="VLM90_10715"
     CDS             complement(4892..>5071)
                     /locus_tag="VLM90_10715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13486.1"
                     /translation="ENMVYIFKPSAVAADGQSLSTWGDTVVVTASGGKRLGKRPHDLA
                     VSGVSDKKGRFDSLS"
BASE COUNT          994 a         1400 c         1469 g         1208 t
ORIGIN      
        1 cgatctgttt gggctcggtc ggcgcgctca catcgaaaat aaaaaaacct tcctccgatg
       61 gctggccgtc agcgccgccc cagcccgggg cgatgcgttc gaggccggcg atcattttac
      121 cgtcggcgat ctggatctga atggtccagg tattttccgg ccctggaacg taagcgcaat
      181 attgcggcgc cgccggatcg gtgacatcga gtacgctcca gccgcgatgc caaaggtgag
      241 cgaggtagag ataccagcgg cgatttttct cctgcatcgc caacttgaag gccggcttgc
      301 cgttcaaatc atggtagccg acggcgtcaa tatttttcgc gaagtaacct ttgggaatcg
      361 cttgcgtcat ggttatcgcc tcacgccgac gcccaactgc gggcagtatt ttttcaccgg
      421 gcagtggctg cacatcggcg agatcggccg gcagagatgc tggccgaaat tcaccagcaa
      481 gttgttgtac tcgatccagt attgcttcgg cagtttggcg cgcagggcaa actcggtttt
      541 ctccggtgtg gcggttttga tatagcccca gcgattggaa atccggtgca catgggtgtc
      601 gacgcagatg ccgggcttgt ggtagcccaa ggtgacgacc aggttggcgg tcttgcgccc
      661 aacgccctta aattcgagca gttcatcgat ttcatcgggc actttgccgc tgtgacggtc
      721 gatgatcgtc tggcacattt cgcgaatttg ccgcgccttg gttttataaa agcccaccgg
      781 gtagatcagc ttttcgattt tcttcgccgt cagttcgacc atcgcttgcg gcgaatcggc
      841 gacggcgaac agtctgtgcg acgctttcgc ggtggtggcg tcctgggtgc gcaaactcag
      901 aatgcacgag attaacacgc gaaacgggct ttggtaggtc tccgccatga gagttacgac
      961 gggggtttcc catttgggca cttcacggcg caggatgcgc acggccgcat gaatttcgcg
     1021 ttcggtcacg ggctagtgtt ttgcctttcg attggctaaa ttgccacggt atctatcaca
     1081 gatcgcgcgc ccggcaaaat ttattcaccc atggttactg acaaagtttt ttccgcttta
     1141 atatcgcgca cgccggagat cgtcacgggt aacggcctca agccggcggc ggtgttgatc
     1201 gcgatccaag agcgcgccga tggcgactac atcgtgctga ccaagcgcgg cgacaacatg
     1261 ccgacgaaca aaggacagat cgcctttccc ggcggacggg tgcatgcggg ggacgccgat
     1321 ctggttgcca ccgcgttgcg cgaaagccat gaagagatcg gcgtcgtgcc ggaacatgta
     1381 cgggtgctcg gccggctgga cgaattcacc gcgggctacg gcatcgtcgt gaccccggtg
     1441 gtcggcgtga ttccgccgca atacgatttt ctcctcgatc tggcggagac cagcgcggtc
     1501 gcctcggtgc cgattcgctc gctgatggaa cccggcactt atgtgaaaaa tgcccatctc
     1561 tcgcccggcg gccacccgag ttatcacttc tatgtcaata atggctggga tatttggggc
     1621 gtcaccgcgc gtatcctggt gcagtttctc gagctcgctt atgattttga gtctgaaaag
     1681 aaatagtctg gcgctgctgc tcgccgccgg tttgggactt tggtccgcct gtgtttccgg
     1741 gccgcatttt tatttgcaat atggcgatga gtaccgcgag ctcgatctgg aaaaaattct
     1801 cgccgacaat ccgctggcgc caggggagaa tatcaaagtc gccaatctcg gccgctcggc
     1861 gagcgccagc cagcatatcg tgcagatccg cgaccgcgag atcttgcatg tgcacaaact
     1921 tcatgacggc acggtgacca tgctgcgcga ccaaggctat ctagtgttgg ccgacaaacg
     1981 tatcaatctt aaggtcggcg atgtaattca catcccgcgc ggcgtcgctc atcaatatgt
     2041 caacggcgca agcgaagcga cggtggtgtt ggcggtgtac gcgccggcct tcgacggcaa
     2101 ggacacccat ccagtcgcca ttccctagac tccataacga gcgcaatccg attccgtgaa
     2161 attacctaac ttcctgctgc cgatgctcgc cgcggcgttg cttgccgcgc cgtttctcga
     2221 accgtggttt ttcccgttgg cttggtttgc cttcgtgccg ctgttttggg ccatcgatcg
     2281 cgccaaaagt ctgcgacatg cggtcttgca cggttggttg atgggactgg tggcccactt
     2341 gatcggcttc cattggctca cctatacgat cagtgtcttc ggcggcttgc cgttcgccgt
     2401 cagctgcata gttttcgtgc tctatgccgc gctgcagggg attcagatgg cgctctttgc
     2461 cctgctcgtg cgcagcatcg gtttcggccc gttgctgatc tttccggcgc tgttttgggt
     2521 gcccctcgaa tttctctttc cgcttttgtt cccctggtat attgccaact cccaggtggc
     2581 gtttctctgg atgatccaaa ccgccgacct ggtcggcccc tatggcactg gtttcatcgt
     2641 catgtggttt agcgcagcgc tctatcacgc gctgttcacg agtgcggaac cgagaaagaa
     2701 aatcctgcca ttggcttacg ctagtttagc gatcgtcgtt gccgtggttt atggcttcca
     2761 gcgtttgcaa agtgtcggtg acgaaatagc cggcgcgcgc aaattatcag tcggcgtggt
     2821 ccagggaaat gtcgacatcg acatgaaatg gaatccagtg ctggcgcaaa aaaacctcga
     2881 ccagcaccgc cagctcacca acgatctccc tgccgtgccg ctggtggttt ggccggagtc
     2941 ggcgatcgag gcgatcattc cggagagggt gcaagcgctg ccgttggacg tgatgccggc
     3001 tttcaagtcg gaccgcgcct acttcatctt cggcgcgaaa agttttcgcg gcactcccgg
     3061 gcggaccgac ggcaaagcct ttaacacggc tttttttacc gacagtaagg ggcggattct
     3121 cacccgctat cataaacaag tattactcgc cttcggcgag tatctgccct tcgcaaaatt
     3181 gttgtcgtgg attccggcgt tgcccatggc cgatggtttt acgccaggac cgggtccggt
     3241 ggtgtttcat ttgccgcgcg cggtgcgggt ggcgccgctc atctgttacg aagatctgct
     3301 gcccgacgtg gtgcgcaagt tcgtcagtga aacccgcgcc aatattctga tcaatctcac
     3361 caacgacgca tggtacggca aatcggtggg accttggcag cacctgcggc tggcgcaatc
     3421 gcgcgccatc gaaacccggc gcagcttgct gcgtgtcacc aacaccggtg ttacttcgtt
     3481 ggtcaatgcc aagggcgaat tggtcaaaac cctgccgatg tttactgctg cggtcatgca
     3541 caccgaagtc gatattttgg aagaaaccac ttactacgtt cgtttcggcg actggttcgc
     3601 ctgggcgatg acgatcgcga cgctgggtat tgtgctgctg cgcttcaaac gggcgtggaa
     3661 aagcgcctga gcgtgcgatt tggtgtaact cttcccctaa ggcgctacag gttagaaaag
     3721 cgttccgccg ctcagacgat cgcaaaattc agtcgccggt aagatccata ttccatcctc
     3781 ggtgcgccgg ctggtacgtt ccaggcagac gatgatttgt tgcttgacgc gcggttggtc
     3841 cactttcagc gcacggagcc cccggaggtg atcagcattt attttcgccg tggctttcgc
     3901 ttcgatggcg agctccatat cgttgacgat gaagtcgact tccatgccgc tggcgaggcg
     3961 ccaatagctg atttgggcga aggcttggct gtatgcgttg tgtgccgtca gctcgtgaaa
     4021 cagccagttt tcaaaggcct tgccgtagag ttcggatcca ggttgaagct cgccgcggcg
     4081 cgccaggtga ttgaccatgc cgacatcgac gaaataaaat tttggcgcgc cgatgactct
     4141 acgtttgggg cgacgagtat aagccggaag ccagcggcca agcagcgtat cttcaaggat
     4201 ctgaaagtag cccttaattg tcggactgga cacgccacaa tcgcgggcga tagttgaaaa
     4261 atttaccagc tcggcgtcgg aaagaacggc gatgttaaga aactcggaga agaccggtag
     4321 attgcgcacg agcccttcgg cggccacttc ttcttttaag tagtcggcaa catacccgtt
     4381 cagcaagggt tgtggattat ccgatagata gatcgttggc aagtagccgt ggttgagaat
     4441 tcgcttgaga ttgaattctc ctgccagctc gcgggcggta agcccatgca actcgtaacg
     4501 caccgcgcgt ccgccgagta gattggcttg gcctcgcttg accttgcgcg cgctcgatcc
     4561 acataacgca aagcgtactt tgcgatgttc gtgcagccaa tgtgcctcgt caagaagttg
     4621 cggcactttt tgaacttcat cgatgactac ttgacgaacc gatgggcggg ccgcgagttg
     4681 ttcgcggaga atttcaggat tgtgcaggta gcggcgaaac tcatctgcct gcaataaatc
     4741 aacccagaga gcgtcgggat agtttgtctg gagaagggtt gtcttgccgg tttggcgcgg
     4801 tccccacaga aaaaatgtct cagtccccgg agcgggaagc gacagttgcc gtttaaacat
     4861 gtactttaaa ttatcatgat tatttaaagt atcaacttaa actgtcaaat cgtccctttt
     4921 tgtcactaac ccccgacaca gctaaatcat ggggccgttt gccaaggcgt ttgccgccgc
     4981 tggcggtgac gacgacggtg tcgccccaag tgctgaggga ttggccgtcg gcggcgaccg
     5041 ctgacggttt gaaaatgtag accatatttt c
//
LOCUS       DATIRS010000847         1629 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1636419, whole genome shotgun sequence.
ACCESSION   DATIRS010000847 DATIRS010000000
VERSION     DATIRS010000847.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1636419"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1339
                     /locus_tag="VLM90_10720"
     CDS             <1..1339
                     /locus_tag="VLM90_10720"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HSQ13487.1"
                     /translation="AGSTDECSRIVQAQIRQMNGKGESSIVGTALSAPATKAALAHGV
                     AGHAMDYDDTQLSTSKEAVYGLLTHPTTPVLAAVLAIGEKEKISGEHFVLVYLLGVEV
                     ECRIADAINPRHYQDGFHSTATMGGIGAAMAVGKILRFNERKLIQTLGIAASMASGLR
                     ENFGTMTKPLHAGRAAENGVSAALLARDGFTAAANILEARRGFFNAMAGGCDESKITG
                     RLGSPFFMKEPGISIKPYPSGSLSHPAQDLILDLVKQHDLSAGDIDHVEVGTNTNVPN
                     ALIYPMPKTALEGKFSIPFCMAIAILERKAGIAQFQDRKVRDRKVVELMKRVTLCVDD
                     ELEKLGYDQVRSRIRIRLKNGRVIEGRYDVARGHPEKPMSWEELGDKFRDCAGLVLAD
                     RDTESAIQLLARIEKLTSLSPLFRALTSAGAKNGKKRKSSGMPVKAYSPRSAK"
BASE COUNT          369 a          467 c          470 g          323 t
ORIGIN      
        1 ggccggttcc accgacgagt gctcgcgcat tgttcaagcg caaattcgcc aaatgaacgg
       61 caagggcgag tcgtctattg tcggcaccgc gctgtcagcg ccggcaacca aagcggcgct
      121 ggcccacggc gtggccggcc atgcgatgga ttacgacgat acccagcttt caacttccaa
      181 ggaagccgtt tacggtctcc tgacgcatcc gaccacgcct gtgctcgccg ccgtgttggc
      241 catcggtgag aaagaaaaaa tcagcggcga gcattttgtt ttggtctatc tgttaggcgt
      301 cgaagtcgag tgccgcatcg ccgatgcgat caatccacgc cactatcagg atggctttca
      361 ctccaccgca accatgggcg gcatcggcgc cgccatggcg gtgggaaaaa tccttcgctt
      421 caacgagcga aagttgattc aaacgttggg cattgccgcc agcatggcgt ctggtctgcg
      481 cgaaaacttc ggcaccatga ccaagccgct gcacgccgga cgcgccgcag agaacggcgt
      541 gagcgccgcg ttgttggcgc gcgacggctt cactgcggcg gcgaatattc tcgaagcccg
      601 ccgcggcttt ttcaacgcca tggccggcgg ctgcgacgag agcaagatta ccggccgcct
      661 aggttcgcct ttcttcatga aggagccggg aatttccatc aagccgtatc catcgggctc
      721 actctcgcac ccggcgcaag atttgattct cgacctggtc aaacagcatg atcttagcgc
      781 gggcgacatc gatcacgtcg aagtcggcac caataccaac gtgcccaacg ccttgatcta
      841 tccgatgccc aagaccgcgc tggaagggaa attcagcatt ccattctgca tggcaatcgc
      901 tatcctcgag cgcaaggccg gcatcgcgca gttccaggac cgcaaggtgc gcgacaggaa
      961 ggtcgtcgag ttgatgaagc gggtgacgct ctgtgtcgac gatgaacttg aaaaactcgg
     1021 ctacgatcaa gtgcgttcgc ggattcgcat caggctgaaa aatggccggg tgattgaagg
     1081 gcgctatgac gttgcccgtg gacacccgga aaaaccgatg agctgggaag agttgggcga
     1141 caaatttcgc gactgcgccg ggctcgtgct ggcggacagg gacaccgagt cggcgatcca
     1201 attgctcgcc cgcatcgaaa aactgacaag cttaagccct ctgttccgcg ctctgaccag
     1261 cgccggcgca aagaatggta aaaaacgtaa atcttctggg atgcctgtga aggcgtattc
     1321 accacgaagt gctaaatgat cttccgctcg tctacagagt attaatatgg ctgggagact
     1381 aacttccgac cttcgtctcc ttcgggcctc cttagaaaat acatgtaagg ggagggtctc
     1441 cacaatgaag agatcagctg ggttccgtca tacccgcgaa agcgggtatc caggctaatt
     1501 gggcgcagac aaaacctgga ttcccgcgtg cgcgggaatg acgcgtcaag cagaccgcct
     1561 aatggaggga atcccatcca ttttcatact ctgtagacga gcggaagatc atttagcact
     1621 tcgtggtgc
//
LOCUS       DATIRS010000848         1607 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1046644, whole genome shotgun sequence.
ACCESSION   DATIRS010000848 DATIRS010000000
VERSION     DATIRS010000848.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1607
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1046644"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..238)
                     /locus_tag="VLM90_10725"
     CDS             complement(<1..238)
                     /locus_tag="VLM90_10725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13488.1"
                     /translation="MGKPDHREKMRNFWLDVFSNSKANGAEYREDRLPSHTWSWPTDT
                     YLQRRLRMVRAAAADEPVIVAQNPTLRQPAPREEG"
     gene            complement(586..1488)
                     /locus_tag="VLM90_10730"
     CDS             complement(586..1488)
                     /locus_tag="VLM90_10730"
                     /inference="COORDINATES: protein motif:HMM:TIGR02122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HSQ13489.1"
                     /translation="MAMTIRIGTSELGGTFYTQGQAIAELFNQGRAADPCVVQTSDAS
                     IHNAKQLDAGGLEFGFMASNWIGRAKDAAAPFTKNIAIRMVAPANAGPMCFVRLANAP
                     IHSVADFAGKRIAIGTQGSGMEQHIHTIFNVLGISFDSFTPMHMGFAEGGDALIAGKI
                     DVQFHPPIPNAVLTDLSRRADIRVIPYASAQLDKLFAQVPFYRPVTVEKNAFRGVVED
                     IVQVGVINVIVTHESVAESAVYAMAKTIADNLDKLPQMNPLFKGLKNLFEPLRTKGAA
                     AFEFGGVPLHPGAIRAYKDAGWLR"
BASE COUNT          325 a          494 c          455 g          333 t
ORIGIN      
        1 ccccctcctc tcgcggagcc ggctgacgca aggtgggatt ctgtgccacg atcacgggct
       61 cgtctgcagc cgcggcgcgc accatccgca accgccgctg caaataggta tcggtcggcc
      121 aggaccaagt gtgcgacggc aggcgatcct cgcggtactc cgcgccattg gccttgctgt
      181 tgctgaagac atccagccaa aagttgcgca tcttctccct atgatccggc ttgcccatct
      241 tgctgtcctc tcaattggtt ttgttcgata ctgtaacgat cacaacggat agaaccgtca
      301 acgccgattc accggttccg gatcgtcggc taggttcgac cccacatcag cctagcgcag
      361 attgcgtacc atggcggaat tggccattgt tggcgcaaga tcggcgacaa taaactaatt
      421 tcttgaccag acggctaagg cacttttgcc gccctgagaa gggatcaatg gcctatcggg
      481 taacgagcgg aggaggcctc cagaaccgga aggttagccg caaagaacgt aaaaatcgcg
      541 caaaactagt ccctataatt tttgcgttct ttgcggccaa tgctgttatc tcaaccagcc
      601 cgcatctttg tacgcccgga tggcgccggg atgcagcggc acgccgccga actcgaaggc
      661 ggcggcgcct ttggtgcgca gcggctcgaa gaggtttttc agccctttga acagcggatt
      721 catctgcggc agcttgtcga gattgtcggc gatggtcttc gccattgcgt agaccgcgct
      781 ttcagcgacg ctttcatggg tgacaatgac gttgatcacg ccgacctgca caatgtcttc
      841 gaccacgccg cggaaggcgt ttttttccac cgtcaccggc cggtaaaacg gcacctgagc
      901 gaacagcttg tcgagctgcg ccgaggcata cggaatcacc cgaatatcgg cgcgccggct
      961 cagatcggtg agcactgcgt tgggaatcgg cggatgaaac tgcacgtcga tcttgccggc
     1021 gatcagcgcg tcgccgccct cggcaaaccc catatgcatc ggcgtaaaac tgtcgaagga
     1081 aatccccagc acattgaaga ttgtgtgaat atgctgctcc atgccgctgc cttgggtgcc
     1141 gatggcgatc cgtttgccgg cgaaatccgc gaccgagtgg atcggcgcat tggccagccg
     1201 cacaaagcac atgggcccgg cgttggccgg cgccaccatg cggatggcga tatttttggt
     1261 gaacggcgcc gcggcgtctt tggcgcggcc gatccaattg gacgccatga agccgaactc
     1321 aagaccgccg gcatcgagtt gcttggcatt gtggatgctc gcgtcgctgg tctgaaccac
     1381 gcacggatcg gccgcgcgtc cctggttgaa aagttcggcg atcgcctgcc cctgagtgta
     1441 aaaagtcccg ccgagctctg aagttccgat tcgaattgtc atcgccatca gcctcctgtc
     1501 tttgtctcca atcctcttac accagcccac cgcagcgctg caaatgaccg gcgcgctaca
     1561 ccgcggcaac gaccgacttg catctaatga tagcaccaag cctcgac
//
LOCUS       DATIRS010000849         1957 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1735543, whole genome shotgun sequence.
ACCESSION   DATIRS010000849 DATIRS010000000
VERSION     DATIRS010000849.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1957
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1735543"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            109..789
                     /locus_tag="VLM90_10735"
     CDS             109..789
                     /locus_tag="VLM90_10735"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ13490.1"
                     /translation="MAAVAAQNVTKIFGQGDGRVVALKDAQLSIEPGEIVALMGPSGS
                     GKTTLLRALSLIDPPTTGQIAIDNQLVFDGERVLTDDRKLRRQRMGIIFQAYNLIPFL
                     TSLENVALVLTLNGISHHEAMTRASELLKRLDLGQRVDIYPATLSGGEQQRVAVARAV
                     INDPAVILADEPTAALDTERGKAVMELLRNLGRTQHAAVIVVTHDERMIEGFDRVYHM
                     IDGRITSH"
     gene            961..>1957
                     /locus_tag="VLM90_10740"
     CDS             961..>1957
                     /locus_tag="VLM90_10740"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008776 - acetate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006083 - acetate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006113 - fermentation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate/propionate family kinase"
                     /protein_id="HSQ13491.1"
                     /translation="MKVLVLNCGSSTLKFQVVETDGLAESRKLARGIVDRIGGSAAYS
                     FRTDNGAPEEKALAVANHDVAVRLVIDWLRAQPNLRAIDAVGHRVVHGADRFADSVLI
                     DDAVIVELEGLCEIAPLHNPGAVSGIRAARKILGDAVPMVAAFDTSFHHMIPEQAALY
                     AIPYELSQKHKIRRYGFHGLAHRYDVGRYAELIGKPVAQVNAVTLHLGNGCSATAIRD
                     GQSIDTSMGFTPLEGLVMGTRSGDIDPALVSYLVRKEQVDAAEVENWLNKRSGLLGLS
                     GLSNDMRELTAAYHTNPRARLAIDVFCYRARKYLGAYLAVLEGRAEAVILSGGIGE"
BASE COUNT          377 a          534 c          633 g          413 t
ORIGIN      
        1 gtacatcctg ttcggcattg tcatggtcat ctgtgtgctg gcgagcctgc ttggcatacg
       61 ccgcgccctc gctatcgacc cgacgacggc gatgggagga ggggcataat ggctgcggtg
      121 gcggcgcaga atgtcaccaa gattttcggc caaggagacg gccgtgtcgt cgcgctcaag
      181 gatgcgcagc tgtcgattga accgggcgag atcgtcgcgc tgatggggcc gagcggatcg
      241 ggcaagacaa cgcttctgcg cgcgctttcg ctgatcgatc cgccgaccac cggacagatc
      301 gcgattgaca atcaattggt gttcgacggc gagcgggttt tgaccgacga ccgaaagctg
      361 cggcgccagc gcatggggat catctttcag gcttacaatc tgattccatt tctgacttca
      421 ttggaaaacg tcgccctcgt gctcacgctt aacggcattt cacatcacga agcgatgacg
      481 cgcgcaagcg agctcctcaa acgtctcgat cttggccagc gtgtcgatat ctatcccgcc
      541 acgctgtcag gcggcgaaca gcagcgggtt gcggttgccc gagcggtgat caacgatccc
      601 gccgtgattc tggccgatga accgaccgcg gctctcgata ccgaacgggg caaggcggtg
      661 atggagctgc tgcgcaattt gggaagaacc cagcacgcgg cggtgattgt ggttacccat
      721 gatgaaagaa tgatcgaggg ctttgaccgg gtctatcaca tgatcgatgg gcggattacc
      781 agccattgat cggaggtgaa agaaaatgac tgacggctta tggtttattg gctttttcgt
      841 cgcctacatt gtcttgatgc gttgggtgtt gccgcgcctg ggagtgccaa cctgaatgtc
      901 atctgcgcgc ggcgtcgagt ctcgacgcca gggtgacgag aagaaacaag agtctgaacg
      961 atgaaagtcc tggtcctcaa ctgcggcagc tcgacgctca agttccaagt cgtcgagacc
     1021 gacggactgg cggaatctcg caagctcgcc cgcggcatcg tcgaccgcat cggcgggtcg
     1081 gcggcttatt ccttcaggac tgacaacggc gcgcccgaag agaaggcgtt ggcggttgcc
     1141 aatcacgacg ttgccgtgcg cttggtgatc gattggctgc gggcgcagcc gaatttgcgc
     1201 gccatcgatg cggtgggcca ccgggtggtg catggcgctg atcgattcgc ggattcggtg
     1261 ctgattgacg acgcagtgat cgttgaactc gaagggcttt gtgagatcgc gccgttgcac
     1321 aatcccggcg ccgtcagcgg tattcgcgcg gcgcgcaaga ttctcggtga cgccgtgccg
     1381 atggtggcgg cgttcgacac gtcttttcat cacatgatcc cggaacaggc ggcgctctat
     1441 gcgattcctt acgaactgtc acagaagcat aaaattcgcc gctatggctt tcatggcttg
     1501 gcgcatcgat acgatgtcgg gcgctacgct gagttgatcg gaaagccggt tgcgcaggta
     1561 aacgctgtca cgttgcactt gggcaacggc tgctcggcga cggcgattcg cgacggccaa
     1621 tcgattgaca cttcgatggg ctttacgccg ctcgaaggtt tggtcatggg cacgcgctcg
     1681 ggcgatatcg atccggcgct ggtgagttac ttggtgcgta aggagcaagt ggacgcagcg
     1741 gaggttgaaa attggctcaa caaacgctcg ggtctgctcg gcctttccgg tctctccaac
     1801 gacatgcgcg aattaaccgc ggcgtaccac accaatccgc gcgcgcggct ggcgatcgat
     1861 gtgttttgtt accgcgcgcg caagtattta ggcgcgtatc tggcggtgct ggaaggcagg
     1921 gccgaagcgg tgatccttag cggcggcatc ggcgaaa
//
LOCUS       DATIRS010000850         1919 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_850182, whole genome shotgun sequence.
ACCESSION   DATIRS010000850 DATIRS010000000
VERSION     DATIRS010000850.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1919)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1919)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1919
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_850182"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..829)
                     /locus_tag="VLM90_10745"
     CDS             complement(<1..829)
                     /locus_tag="VLM90_10745"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13492.1"
                     /translation="MLNFRAVLLILSAIPSGALAAYAAVAPNKMTIAYASIGPRSAPL
                     WAAEEYGIFRKHGIEPQVIFVRGAPTLVAALTSGDMDIGYTGGTAVLGASTAGIDLKI
                     LAVLTNRVTYDLVARPGIKSAEDLRGKRFGVTSIGGTLWMGGVLGLEKLGIDSSRDDI
                     RFLVLGDQVVLSQALEDNRIDATVLDMVFSKRLAQKGFPILAELHKTNLPITSTSIVA
                     RQAYIQKNPQLMENFMKAVMEGIAFVLGPPNKAATIKLLQRRLHVSEREAEEGFVDML
                     "
     gene            1040..>1919
                     /locus_tag="VLM90_10750"
     CDS             1040..>1919
                     /locus_tag="VLM90_10750"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ13493.1"
                     /translation="MALLEYFHARAVHGNVVVALFTVLLLFRPALVPAAENKLSWQID
                     WDKTVKAAESEGEVNVYVVDYPRFAVSQFQKAFPKIKLNMIDGPSGPALSSRLMAERR
                     AGKYQADLYIAGQGTHVSVLYPAKALAPMPPAFILPEVKDESRWFKGKHRFVDPETRH
                     SFVFQGHRGLYVSYHTGQVKADEIKSWADLINPKWKGKLIGYDPAVAGVARNVLWYVY
                     KNKFLGADFMHKLYGDMEITIARDQRQLVDWLATGKAALCIACDDADINSAKENKLPV
                     ETVTHTLKEGDYVAAGQ"
BASE COUNT          408 a          583 c          539 g          389 t
ORIGIN      
        1 tgagcatgtc gacgaagccc tcttccgcct cccgttcgct cacgtgcaga cgccgctgca
       61 gcaacttgat cgtcgcagct ttgttcggcg ggccaagcac gaaggcgatc ccctccatca
      121 ccgccttcat aaaattctcc atgagctggg gattcttctg gatgtaagcc tggcgcgcga
      181 cgatgctcgt gctggtgatc ggcaggttgg tcttgtgcag ctcggctaga atcggaaatc
      241 ccttttgggc gagccgcttg ctaaacacca tatcgagcac cgtggcgtcg atgcggttat
      301 cttccagcgc ttgactgagg accacctggt cgccgagaac gagaaagcgg atatcgtcgc
      361 ggctgctgtc gattcccaac ttttccaagc cgagcacgcc gcccatccac aacgtaccgc
      421 cgatgctggt cacgccgaag cgtttgccgc gtaaatcttc ggcgcttttg atgcccggac
      481 gcgccaccaa gtcgtaagtc acacggttgg tcagtaccgc gagaattttt agatcgatgc
      541 ccgccgtcga agcgccgagc accgccgtgc cgccagtgta gccgatgtcc atatcgccgg
      601 aagtcagggc ggccaccaac gtcggcgcgc cgcgcacgaa gatcacttgc ggctcgatgc
      661 cgtgtttgcg aaagatgcca tactcctcgg cggcccagag cggcgccgag cgcggtccga
      721 tggacgcata cgcgattgtc atcttgttgg gcgccaccgc cgcataggcc gccagtgcgc
      781 cgctcggaat cgctgagaga atcagcaaca ccgctcgaaa gttaagcatg gctctctcct
      841 ttcgctacga ctgttcttgc gcccatgcgt gccttttcgg acagtagtcg agactatttg
      901 tttctgtcaa cgccagcgat aatggttgca acacactggc atgaagtcgg gcgccggccg
      961 atgcgacgac gaagatcggc agcgctcttg acaggatttt cccgagcgga ctaaggtgcc
     1021 gaaagtcaat cggaacacta tggctttact tgaatacttc catgctcgcg ccgttcacgg
     1081 caatgttgtc gtagcactat ttacggtgct gcttctcttc cgccctgctc tagtgccggc
     1141 agccgaaaac aaacttagct ggcaaatcga ctgggataag accgtcaagg ccgccgagag
     1201 cgaaggcgaa gtcaatgttt acgtcgtcga ctatccgaga tttgccgtca gccaatttca
     1261 aaaagcattt ccgaaaatca agctaaatat gatcgacggc ccgagcggcc cggcgctgtc
     1321 gtcgcgcttg atggccgaac ggcgcgcggg taagtaccag gccgatctct atatcgccgg
     1381 ccagggtacg catgtttcgg tgctctatcc ggcaaaggcg ttggcgccga tgccgccggc
     1441 gttcatcctg ccggaagtca aagacgagtc gaggtggttc aagggtaagc atcgcttcgt
     1501 cgacccggaa acccgccact cgtttgtttt ccaaggccat cgcggcctct atgtctccta
     1561 ccacaccggc caggtcaaag ccgacgagat caagtcgtgg gcggatctga tcaatccgaa
     1621 atggaaaggc aagctgatcg gctacgatcc agcggtcgcc ggcgtggcgc gcaacgtgct
     1681 ttggtacgtc tacaagaata aatttctcgg cgcggacttc atgcacaaac tctacggcga
     1741 catggaaatc acgatcgccc gcgaccagcg ccaactagtc gactggctcg ccaccggcaa
     1801 ggccgcgctc tgcatagcct gcgacgacgc tgacatcaac agcgctaagg aaaacaagct
     1861 gccagtggaa actgtcaccc ataccttgaa agaaggcgac tatgtcgccg ccggccaag
//
LOCUS       DATIRS010000851         2437 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_62580, whole genome shotgun sequence.
ACCESSION   DATIRS010000851 DATIRS010000000
VERSION     DATIRS010000851.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2437)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2437)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2437
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62580"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..489)
                     /locus_tag="VLM90_10755"
     CDS             complement(<1..489)
                     /locus_tag="VLM90_10755"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004061 - arylformamidase activity
                     [Evidence IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HSQ13494.1"
                     /translation="MKLYDISLTLSPESIRWVTAPPRELVGRKRMSKGDTNNSSSIHT
                     SVHAGTHVDAPFHFLPDGITIEALPLETFIGPARVCSAEPGTHITAADVAKANLQGET
                     RVLFKTRNSQLLKKGVYDASFAPFSVDGAKALVDLGVKLVGLDYLSAAGAAEQVPVHR
                     AFL"
     gene            complement(876..1298)
                     /locus_tag="VLM90_10760"
     CDS             complement(876..1298)
                     /locus_tag="VLM90_10760"
                     /inference="COORDINATES: protein motif:HMM:NF015862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HSQ13495.1"
                     /translation="MKLTLEKANTICTRALAHAHENKIRPLCVTVLDDGGNLKALQRD
                     DGASLLRPTIAVSKAWGAIGMGESSRHLGTRLKEMPAFLGALSDMSGGKVVPVAGGVL
                     IMDGESIIGAAGASGATADEDEACVVAGIKAAGLEYKV"
     gene            complement(1321..1941)
                     /locus_tag="VLM90_10765"
     CDS             complement(1321..1941)
                     /locus_tag="VLM90_10765"
                     /inference="COORDINATES: protein motif:HMM:NF014659.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HSQ13496.1"
                     /translation="MAVRSIHQRWAWRTAAQIAIVIAVHGAAATAAERSLAGQLLVAT
                     SEMKDPRFAETVIYLVKHSGEGAVGLIINKPVTKGSVSEVLKGFGIDSNGAKGEIVVH
                     YGGPVGRDHGFVLHSDEMVLDSSTKVKDGIAMTADAKMMQLLALGTGPRQALLILGYA
                     GWGPGQLESEIKATSWFTVSTDKSFVFAKDAEKKWRRAMDKRQIPL"
     gene            complement(1978..2409)
                     /locus_tag="VLM90_10770"
     CDS             complement(1978..2409)
                     /locus_tag="VLM90_10770"
                     /inference="COORDINATES: protein motif:HMM:TIGR03618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PPOX class F420-dependent oxidoreductase"
                     /protein_id="HSQ13497.1"
                     /translation="MAEFIPVETDRAKEFLKNHHHGVLATRRKNGDLQMSPVTCGLDS
                     EGRAVISSRETAYKVNNLRRDPRAALCAFSNTFHGEGWVQVSGKAEIVSLPEALDTLA
                     YLQRQAYGEHKSWPEFHQRMVREKRVIIRITIESVGPKVRG"
BASE COUNT          439 a          740 c          707 g          551 t
ORIGIN      
        1 gagaaacgcc cggtgcaccg gcacctgctc ggccgcaccg gcggccgaca gataatcgag
       61 cccgaccaat tttacgccga ggtcgaccag agccttggcg ccgtcgacgg agaacggcgc
      121 aaagctggca tcgtagacgc ccttcttcag gagctgcgag ttgcgggtct tgaacagcac
      181 ccgggtctcg ccctgaagat tcgccttggc gacatcggcg gcggtgatat gcgtccctgg
      241 ttcggcggaa cacacccgcg ccgggccgat aaaggtctcc aacggcaaag cctcgatggt
      301 gatcccgtcc ggcaaaaagt gaaacggcgc gtcgacatgg gtgccggcat ggacgctggt
      361 gtgaatcgat gatgagttgt tggtgtcgcc cttgctcatg cgcttgcgcc cgaccaactc
      421 ccgcggcggg gccgtcaccc aacgaatcga ctccggcgaa agggtcaaag agatatcgta
      481 aagtttcata gcatcatcct ccctcaagcg atcctattcg agccgcgaat gtgtcacaag
      541 tctgctttgc cagaaatcat ttcaccacga aggacacgaa gatcacgaag ttcgaaagaa
      601 ttatccgaac ccttcgtgtc cttcgtgcta ctatatttga gaatttgcgc ggcctgggca
      661 aatcttgtcg ccgtgcaatc tccgacccgc cgccccaggg cgtatgccat acgcccctac
      721 attcggaata cctccgaaat tttgttttgc gttctttgcg ccctttgcgg ttaaatcatt
      781 cgattccgaa tcttcttcgg ttgcggcgca gccgcgctgt accttcgtgg tgcatcagtt
      841 cagtgcgctc gctcgccgat ggttcattgg gtgctttaaa ctttgtattc cagacccgcg
      901 gctttgatac cggcgacgac gcaagcttcg tcttcatccg cggtggcgcc gctggcgccg
      961 gccgcgccga tgatggattc gccatccatg atcaacacgc cgccggccac cggcacgact
     1021 tttccgccgc tcatgtccga gagggcgccg agaaaagcgg gcatctcctt caagcgagtg
     1081 ccaagatggc ggctcgactc gcccatgccg atggcgcccc aagctttgct tacggcgatg
     1141 gtcgggcgca atagactcgc gccgtcgtcg cgttgcagcg ctttgagatt gcctccgtcg
     1201 tcaagcacgg tgacgcagag cgggcgaatc ttgttctcgt gcgcgtgggc gagcgcgcgg
     1261 gtgcagatgg tgttggcttt ttccaatgtc agcttcatga ctttaccggt tccttccata
     1321 tcacagaggt atttgtcgtt tgtccatggc acggcgccat tttttctcgg cgtccttggc
     1381 gaaaacgaaa gacttgtcgg tgctgactgt gaaccaggag gtggctttga tctccgactc
     1441 caactgtccg ggaccccatc cggcataacc caggatgagc aacgcctggc gcggcccggt
     1501 tcccaatgcc agcaattgca tcatcttggc gtcggcggtc atggcgatgc cgtctttgac
     1561 tttggtgctg ctgtccagaa ccatctcgtc gctgtgcagg acgaatccat gatcgcggcc
     1621 gaccggtccg ccgtagtgca caacgatttc gcctttggcg ccgttgctat cgatgccgaa
     1681 gcccttcagg acctcgctga cagagccctt ggtgaccggc ttgttgatga tcagaccgac
     1741 cgcaccctcg ccgctatgct tgaccaggta gatgaccgtt tcggcaaagc gcgggtcttt
     1801 catttcgctg gtagcgacca gcagttgacc ggccaaggat cgttcagccg ccgttgccgc
     1861 ggcgccgtgc acggcgatga caatggctat ctgtgccgca gttcgccaag cccaccgctg
     1921 atgtatcgat cttaccgcca tggttcgatt tctatatctt aaggccgccg aatcgcttta
     1981 gccgcgcacc ttggggccga cgctttcaat cgtgatgcga atgatcacgc gcttctcgcg
     2041 caccatgcgt tggtgaaact ccggccagct cttgtgctcg ccgtaggctt ggcgctgcaa
     2101 gtaggccagg gtgtcgaggg cttcgggcag tgaaacgatc tcggccttgc cgctgacttg
     2161 aacccagccc tcgccgtgaa atgtgttcga aaacgcgcat agggcggcgc gagggtcgcg
     2221 ccgcagattg ttgaccttgt aggcggtctc gcggctgctg atcaccgccc ggccttcgct
     2281 gtcaaggccg caggtcaccg gcgacatctg caagtcgcca tttttgcgcc gggtggcgag
     2341 cacgccatgg tgatggtttt tgagaaactc tttggctctg tcggtttcca ccgggatgaa
     2401 ttctgccatc gggcgatttc cttcttccgt aactgag
//
LOCUS       DATIRS010000852         1851 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1047101, whole genome shotgun sequence.
ACCESSION   DATIRS010000852 DATIRS010000000
VERSION     DATIRS010000852.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1851
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1047101"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..792
                     /locus_tag="VLM90_10775"
     CDS             <1..792
                     /locus_tag="VLM90_10775"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HSQ13498.1"
                     /translation="FSFTTPLTATFVSLAIHSVILWIAVFVTGGIPPVATGAIVAIAI
                     TGLLQPAIRHFHYTGIHKIGTSRAVTLRNSYPFLTVIAGIVFLGEPLTLLGMAGTLLV
                     VAGIILTSWRMDRNLPSFRWVYLFYPIATVLLTTIVHPLRRYALIQSHEPLLLAALVG
                     PIALISFAAFYASPACTDKLVWDRRASWPLVLSGIFETLAVLFMLIAFASGPVYIVSP
                     ISATVPIWTMMIGAVFLREVERINLATIVGTILVVAGVIVISRVE"
     gene            complement(836..1627)
                     /locus_tag="VLM90_10780"
     CDS             complement(836..1627)
                     /locus_tag="VLM90_10780"
                     /inference="COORDINATES: protein motif:HMM:NF014670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="creatininase family protein"
                     /protein_id="HSQ13499.1"
                     /translation="MLELNKISFPEVKRLADSLRALTILPVGVVEEHGAHLPLGVDSF
                     AAEIYAASAAPHLEGAGYEVVVAPTINYGVARAAIDFPGTLSLEPETLRSMVVEIGKS
                     LARHGLDRLVVLNGHRDLHHMKALDDARAILVSEKAAQVLVVGFAHDPEMTAACYREG
                     VKQFYQSPRPDREGHGGESETSVALHGFPELVKREIIGELTPNFDYDVEAFRNETKDY
                     WSITDGRGYFGSPQAASAQTGAKLVAIRGGNIANVILKAWGKPST"
BASE COUNT          362 a          579 c          478 g          432 t
ORIGIN      
        1 ttcagcttta cgacgccgct taccgcgact ttcgtgtcgc tggcgatcca cagcgtcata
       61 ctttggatcg cggtgttcgt gactggcggg attccaccgg tcgcaaccgg cgcaattgtc
      121 gccatcgcca tcaccggcct gctccagccg gccattcgcc atttccacta caccggtatc
      181 cataagatcg gcacttcgcg ggcggtgacg ctgcgcaact cctatccatt tctcacggtg
      241 atcgccggca tcgtgtttct cggcgagccg ctgacgctat tgggcatggc cgggactctg
      301 ctcgtcgtcg ccggcatcat cctgacttcc tggcgcatgg accgcaactt gccctcgttc
      361 cgctgggttt atctgttcta tcccatcgcc accgtgctgc tgaccaccat cgtccatccg
      421 ctgcggcgct acgcgctcat ccagtcacac gagccgctgc tgctagcagc tctagtcggt
      481 ccgatcgcgc tgatatcctt cgccgcgttt tacgcgtcgc cggcatgtac ggacaaactg
      541 gtctgggatc gccgggcctc ttggccgctg gtcctttcag gaatattcga aaccctcgcc
      601 gtgcttttca tgctgatagc ctttgcctcg ggaccggtct atatcgtgtc gccaatttcg
      661 gcgaccgtgc caatctggac gatgatgatc ggcgctgtct ttctcagaga agtcgagcga
      721 atcaatcttg caacgattgt cggaacgatt ctggtggtcg cgggagtaat cgtaatctcc
      781 cgggtggaat agacagcgcg atcggctcgc gaacgaacac gaaccacgag cacgatcacg
      841 tcgacggctt accccacgcc ttcaagatca cattagcgat attgccgccg cggatcgcca
      901 ctaatttcgc gcccgtctgc gcgctcgccg cttgcggcga gccgaagtaa ccacggccgt
      961 cggtaatgct ccagtagtct ttggtttcat tgcgaaaggc ctcaacatca tagtcgaagt
     1021 tcggcgtcag ctcgccgata atctcgcgct tcaccagctc gggaaagcca tgcagcgcca
     1081 ccgaagtctc cgattcgccg ccatgtcctt cacgatcggg acgcgggctc tggtagaatt
     1141 gtttcactcc ttcgcgataa caggcggcgg tcatttccgg atcgtgagca aagccaacaa
     1201 ccagaacctg cgcagctttt tccgagacga gaatcgcccg cgcatcatcg agcgctttca
     1261 tatggtgcag atcgcgatgg ccgttgagta ccacgagacg gtcgagtcca tggcgcgcca
     1321 gcgatttgcc gatctcgact accatcgagc gtaaggtctc cggttccaac gacaaagtac
     1381 cggggaaatc gatggccgcc cgcgccacac cgtagttgat cgtcggcgcg acgacgactt
     1441 catagcccgc gccttccaaa tgcggcgccg ccgaagctgc gtaaatctcc gccgcaaagg
     1501 aatcgactcc caacggcaga tgcgcgccat gctcctcgac gacaccgacc gggagaatcg
     1561 tcagcgcccg cagactatcc gccagccgct ttacttcagg aaatgagatc ttatttaatt
     1621 caagcatttg ttgcctcgaa gcccatgctg gaagattgca gtcatggagt attcgaccga
     1681 atagcgaata ctttaatact gtattatttc aatattttac tgctggtcat ctaaacattt
     1741 cccgaaactt cttgctccaa tttgtcagct cctcgttgtt tggcagccgc atgactagga
     1801 tctggtcgtc cttcacatcc tttttgaact tgtgatcggc ctcaggatga a
//
LOCUS       DATIRS010000853         2235 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_554728, whole genome shotgun sequence.
ACCESSION   DATIRS010000853 DATIRS010000000
VERSION     DATIRS010000853.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2235
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_554728"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..789)
                     /locus_tag="VLM90_10785"
     CDS             complement(<1..789)
                     /locus_tag="VLM90_10785"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ13500.1"
                     /translation="MGKILALILSYLALTSVQPAFGQSAQSIAAAKKEGGKVILYTSM
                     ESFTADALKAAFEKKTGLQMEYWRGGSTEVLDRVLSEHRVGRPGFDTVAITGDHMRLM
                     ANEGAIGKYDSPSLKAFAKEAIDPVLGARYRNIMYGVIYNKNHLKAGEYPKTLEDIVK
                     PEFRGKLVMPHPVAHTLTTQWLASLDKIMPKQRVEKFVRDLAAAKPMFAESIVPAADK
                     VGSGEVPIGITFARFVLTYNKQGANLDYIRDYNMLGDGQYINIAA"
     gene            complement(966..1493)
                     /locus_tag="VLM90_10790"
     CDS             complement(966..1493)
                     /locus_tag="VLM90_10790"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13501.1"
                     /translation="MTIFPAGDSASRIISLTTKAIDGTMLSYPDINEAFRHGMHEFAK
                     MSDVKGSSFPMNVMVARRSWVEKNRDAVKRFQQAYAEGVYQFMNSKEKAVAVLAKWLR
                     FKNPKAIEETYQYFGKSFAFPTRVSHEGLRNTLEITAQRNPSVKVDMTISRYLDESII
                     DELEREGFFKRIAGK"
     gene            complement(1405..1950)
                     /locus_tag="VLM90_10795"
     CDS             complement(1405..1950)
                     /locus_tag="VLM90_10795"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13502.1"
                     /translation="MTSKLLPWLFIFLLYPFSARAQETQLVAYAGFAGFQAPVWAPKD
                     FGLFTKYGFNGDLVFLSGSVRQLQALLGNSIQLAQVDAATAVNAINQGADLVMISGTL
                     NSFPYSFITQKDIRKPEDLVGKKIGVLAVGGATETANIPSAASLEHPAPSGDHLPRRR
                     FGLADHFPHHQSNRRHHALLP"
     gene            complement(1974..>2235)
                     /locus_tag="VLM90_10800"
     CDS             complement(1974..>2235)
                     /locus_tag="VLM90_10800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HSQ13503.1"
                     /translation="GHGIVTVGETIDEACINALYMERTAKIVAIAGLHGYQGQTQESI
                     QTLTGSREKLFRRPRDEMYHSAEWNYFADKIKKGERWRRGWT"
BASE COUNT          432 a          570 c          704 g          529 t
ORIGIN      
        1 ggcggcgatg ttgatgtact gcccgtcgcc gagcatgttg tagtcgcgga tgtagtcgag
       61 attggcgcct tgtttgttat aagtcaaaac gaagcgggcg aaggtgatgc cgatgggaac
      121 ttcgccactg ccgaccttat cggctgccgg cacaatcgac tcagcgaaca tcggtttggc
      181 ggccgccagg tcgcggacaa atttctcgac ccgttgcttg ggcatgattt tgtccaaact
      241 ggcgagccat tgagtggtca gcgtgtgggc caccgggtga ggcatgacta acttgccgcg
      301 aaactccggc ttgacgatgt cttcgagggt cttgggatat tcgccggcct tgagatggtt
      361 cttgttatag atgacgccgt acatgatgtt gcggtagcgg gcgcccagca ccgggtcgat
      421 ggcttctttg gcgaaggctt tgagcgaagg cgagtcgtat ttgccgatgg cgccctcgtt
      481 ggccatcaat cgcatgtgat cgccggtgat ggcgacggta tcgaagcccg gccggccaac
      541 gcggtgctcg ctgagcacgc gatcgaggac ttccgtcgag ccgccgcgcc aatactccat
      601 ttgcagtccg gtctttttct cgaaggcggc ttttagggcg tcggcggtga aggattccat
      661 cgaagtatat agtatgacct tgccgccttc ttttttggcc gcggcgatgg actgcgcgga
      721 ttggccgaag gcgggttgga cgcttgtgag cgccagataa ctgagaatga gcgctaaaat
      781 tttacccacg ggaaattcct ttccgatgac aaagtcatcg ctcgacaggg agatatatat
      841 ggtacgggtc gcggtggagt caagcaattt ggattctacg acgccgtggc ttaggggcag
      901 atctatgtgt cagccctctc ggacgggcga ccacacaggg tcgccctcac aggaatgcga
      961 cggaattact tgcccgctat gcgtttgaag aagccttcgc gttcgagttc gtcgatgatg
     1021 ctttcgtcga ggtagcggct gatggtcatg tcgactttga cactggggtt gcgctgggcg
     1081 gtgatttcca gagtgttgcg caagccttcg tgggagaccc gggtggggaa ggcgaagctc
     1141 ttgccgaagt attgataggt ttcttcgatg gctttggggt ttttgaagcg aagccacttg
     1201 gcgagcacgg cgacggcttt ctccttgctg ttcatgaact ggtagacgcc ttcggcgtag
     1261 gcctgttgaa aacgcttgac ggcgtcgcga tttttttcga cccagctgcg gcgcgcgacc
     1321 atgacgttca tcggaaacga cgagcctttg acatcgctca tcttggcgaa ttcatgcatg
     1381 ccgtggcgga acgcttcatt gatgtcaggg taggagagca tggtgccgtc gattgctttg
     1441 gtggtgaggg aaatgatccg cgaggccgaa tcgccggcgg ggaagatggt caccgcttgg
     1501 cgcgggatgt tccaggctcg cagcgctagg aatgttcgcc gtctcggtgg cgccgccgac
     1561 ggcgaggacg ccgatcttct tgccgaccaa gtcctccggt ttacggatat ctttctgggt
     1621 gatgaaactg tagggaaacg aattgagcgt gcccgagatc attaccagat cggcgccttg
     1681 attgatcgca ttgaccgccg tggcggcgtc gacctgggcg agctgaatgc tgttgcctaa
     1741 taaggcctga agctggcgca ccgagccgga gagaaagacc agatcgccgt tgaagccata
     1801 tttggtaaac aagccgaagt ctttcggcgc ccagaccggc gcttgaaagc cggcaaagcc
     1861 ggcgtaggct accagttgag tttcttgggc gcgggcggaa aacggataga gcaggaaaat
     1921 aaatagccac ggcaaaagtt tgcttgtcat ttctggctcc ttacgaaata attttacgtc
     1981 cagccgcgcc tccaacgctc gcccttcttg atcttgtcgg cgaaatagtt ccactcggcc
     2041 gagtgataca tctcgtcgcg cggccggcga aaaagttttt ctctgctgcc ggtgagagtt
     2101 tgaatcgact cctgggtttg cccttgatag ccatgcaggc cagcgatagc cacgattttc
     2161 gctgtgcgct ccatataaag cgcgttgatg caggcttcgt cgatagtttc gcccaccgtc
     2221 acgatgccgt ggccg
//
LOCUS       DATIRS010000854         2133 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1930724, whole genome shotgun sequence.
ACCESSION   DATIRS010000854 DATIRS010000000
VERSION     DATIRS010000854.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2133
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1930724"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..978)
                     /locus_tag="VLM90_10805"
     CDS             complement(<1..978)
                     /locus_tag="VLM90_10805"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13504.1"
                     /translation="MSKITAIDADGHVIERESEIRKHLKAPWNLRTTALRPGDQPWDN
                     YMFGRFVTELTWSKLSAREQVGKWHDILDEHGIETAVCFPTGSGSVVRLQELQFQIAV
                     ARACNDHFAADYNALSKRVKCVGVLPLRSPQAAAEELERAVKELGITAFEILPVGLPL
                     ALGDSFYDPVYEAAERCGAVLGIHGTRSWSRELGAERLNTFAEVHAYAFTAGILLQFT
                     SMICQGVPVRFPKLRFAFLEIGATWLPYYLDRLDEHWEKRAEVEMPLLKEKPSELVRK
                     SEVYFSIEPGESQLPQTIDYVGADHFVWASDIPHWDCEFPGNLDHLRNHA"
     gene            complement(1075..>2133)
                     /locus_tag="VLM90_10810"
     CDS             complement(1075..>2133)
                     /locus_tag="VLM90_10810"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13505.1"
                     /translation="IEGRIWSPSQGPAPGVTGPFTEKARKSRPGMTDPLARLKDMDLE
                     GIDVAILFGTPIALTVNGLMNGEFAAALCRVVNDWLLEYCSADPQRLRAVGLIPCQAP
                     ELAVKELHFLATGGAISAMLPTNVYGWNLGDPMFMPIYEAAETLGMTLSVHPQTGHEG
                     IPGVSGVMAAGSPRFFKYPYVHMTAFVFELMIAMMHMIGEGVFDRFPKLRVGFMEGGA
                     GWLPFWMERFDEHLEKLAPQMPDLKRRPSEIIKSEQLIVTCESEESGLDRVLQASGSG
                     TVCYASDYCHWDCNFPDSVKDIVEARDLSFEQKESILGGNASDFFQMKNLPQPSAIKI
                     ARRTWETAVDKTAAYGGR"
BASE COUNT          417 a          635 c          645 g          436 t
ORIGIN      
        1 cgcgtggttg cgcagatggt cgaggtttcc tgggaactcg caatcccaat ggggaatatc
       61 cgaggcccag acaaaatgat cggcgccaac gtagtcgatg gtctggggca attgcgactc
      121 gccgggctcg atgctgaaat agacttccga ctttctcact aactcgctgg gtttttcttt
      181 cagcagcggc atctcgactt cggcgcgttt ttcccagtgc tcgtcgagac gatccagata
      241 gtagggcagc caggtggcgc cgatctcgag gaaggcgaag cgcagcttgg gaaaacgcac
      301 cggcacgcct tggcagatca tgctggtgaa ctggagcagg atgccggcgg taaacgcgta
      361 ggcatgcact tcggcgaacg tgttgagcct ctcggcgccg agctcgcgcg accaactgcg
      421 ggtgccgtga attccgagca cggcgccgca gcgttccgcc gcctcgtaaa ccgggtcgta
      481 gaaggaatcg cccaaagcca gcggcaaacc gaccggcagt atctcgaagg cggtgatgcc
      541 caattctttt accgcgcgtt ctaattcttc cgcggccgct tgcggcgagc gcagtggtaa
      601 cacgccgacg catttgacac gcttggacag cgcattgtag tcggcggcga agtgatcgtt
      661 gcaggcgcgc gccacggcga tctggaactg gagctcctga agacggacga cgctgccaga
      721 gccggtggga aaacagaccg cggtctcgat gccatgctcg tcgagaatgt cgtgccactt
      781 accgacctgc tcgcgcgccg agagcttact ccaagtcagc tcggtgacga agcggccgaa
      841 catgtaattg tcccagggct ggtcgcccgg ccgcagcgcc gtcgtgcgca gattccacgg
      901 cgcttttaag tgtttgcgga tttcgctttc tctctcgatg acatggccgt cggcgtcgat
      961 ggcggttatc ttgctcatgg tttcactcct ttaggaattt cggattcgga tatttttctc
     1021 gcaaaggcgc aaagacgcga agttcggagg ctttggcgcg ctagggcgca ggccctaacg
     1081 cccgccgtag gccgcggttt tgtcgactgc cgtctcccag gtccgccggg cgatctttat
     1141 ggcgctcggt tgggggaggt ttttcatttg aaaaaaatcg ctggcgttgc cgccgagaat
     1201 gctttctttc tgttcaaagc tcagatcgcg cgcttcaacg atatccttca ccgagtcggg
     1261 gaagttgcaa tcccaatggc aataatcgga agcgtagcag accgtgccgg aaccgctggc
     1321 ttggagcacg cggtcgaggc cgctctcttc cgattcacag gtaacgatta gctgctcgct
     1381 cttgatgatc tcgctcggcc ggcgcttcaa gtcgggcatc tgcggcgcga gcttttccag
     1441 atgttcgtcg aaacgctcca tccagaacgg cagccagccg gcgccgcctt ccatgaagcc
     1501 gactctgagt ttagggaagc gatcgaaaac cccttcaccg atcatatgca tcatggcgat
     1561 catcagctcg aaaacgaacg cggtcatgtg cacgtaaggg tacttgaaaa agcgcgggct
     1621 gccggcggcc atcacgccgg agacacccgg tatgccttca tggcccgtct gcggatggac
     1681 gctcagagtc atgccgagtg tttccgccgc ttcatagatc ggcatgaaca tcggatcccc
     1741 caggttccaa ccatagacgt tggtcggcaa catggcggag atggctccgc ccgtggcgag
     1801 aaagtgcaat tccttaaccg ccagctccgg tgcttggcaa ggaatcaagc cgacggcgcg
     1861 cagccgctgg ggatcggccg agcaatattc cagcaaccaa tcgttcacca ctcggcacaa
     1921 cgccgcggcg aactctccat tcatcagacc gttgacggtg agcgcgatcg gcgtgccgaa
     1981 taaaatcgcc acatcgatgc cttccaagtc catgtctttc aaccgggcga gcggatccgt
     2041 catgccgggg cgcgacttgc gggccttctc ggtgaatggc ccggtgactc ccggcgccgg
     2101 tccctgggag ggcgaccaga tccgcccttc gat
//
LOCUS       DATIRS010000855         1505 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_260234, whole genome shotgun sequence.
ACCESSION   DATIRS010000855 DATIRS010000000
VERSION     DATIRS010000855.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_260234"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(230..1390)
                     /gene="larC"
                     /locus_tag="VLM90_10815"
     CDS             complement(230..1390)
                     /gene="larC"
                     /locus_tag="VLM90_10815"
                     /EC_number="4.99.1.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel pincer cofactor biosynthesis protein
                     LarC"
                     /protein_id="HSQ13506.1"
                     /translation="MRLAYGDLIGGISGDMFVAALIDLGLPLAKLKADLKTIPTLTFA
                     VKTAKKTVHAVRATQFQVICPRQEAPRSWQQIRRLIEGSKLSAPVKTTASDIFTRLAQ
                     AEAKIHGVAVDHVHFHEVGATDSIVDIVAAAIGVRELAIDQLHFSRIPLGHGLTRSQH
                     GPLPVPGPATMELLKGLPTFGIDLDSEMVTPTGAALLKVLGSSFGDQPAMTIDKIGYG
                     TGQKEFPNRPNLFRLSIGTNAANLQHEEMLVIETNIDDMNPQHFDHVMERLFAAGARD
                     VFMAPIQMKKNRPATLLTVICELAQRDRLATVILQETTTIGVRYYPVGRILLARAAKK
                     VKTRFGEVTVKIVTQPDGSRRATPEYDDLKRIAAAKRISLKKIHDEVMRQLK"
BASE COUNT          279 a          416 c          457 g          353 t
ORIGIN      
        1 aaatcaccta tgaaaaggtc aaacctcgtg ccgagcaccg ggcaagacgc tgaaacattt
       61 ggcgctgatg ccttcgctcc tccatggttc cacctcgatc gacactctgg cgttagcttt
      121 cctgatagca tgaataatcc aggtcaggtg tcttcacgat tccaggatcg cacctggctc
      181 ggccgctgct accctgtgtc aacgcggaat ttgcactgaa gcagtgtagc tacttgagct
      241 gcctcatcac ttcgtcgtga attttcttga gcgagatgcg tttggcagcg gcgatgcgct
      301 tcagatcgtc gtattccggg gtggcgcgcc ggctgccgtc cggctgggtg acgattttta
      361 ccgtgacttc gccaaagcga gtttttactt ttttcgctgc tctcgccagg agaatgcggc
      421 cgacgggata gtagcgcacg ccgatggtcg tggtctcctg caatatcacc gtagcgaggc
      481 gatcgcgctg ggcgagttcg cagatcaccg tgagcagcgt ggcggggcgg ttctttttca
      541 tctggatcgg cgccataaag acatcacggg cgccggcggc gaacagccgc tccatgacat
      601 ggtcgaaatg ctgcgggttc atgtcgtcga tgttggtttc gatgaccagc atctcttcat
      661 gttgcaggtt ggccgcgttg gtgccgatgg acaggcgaaa cagattggga cggttgggaa
      721 attctttttg tccggtgcca tagccgatct tgtcgatggt catggccggc tggtcgccga
      781 aactgctgcc caacactttt agcaaagccg cgccggtggg cgtcaccatc tcgctgtcca
      841 gatcgatgcc gaaggttggc agacctttta acagttccat agtcgccggc cccggcaccg
      901 gcagcgggcc atgctgcgag cgcgttaagc cgtgcccaag gggaattcga gaaaaatgta
      961 gttggtctat ggctaattct ctgacaccga tcgccgcggc gacgatgtcg acgatggaat
     1021 cggtggcgcc gacttcatga aaatgaacat gatcgacggc gacgccgtga atcttcgctt
     1081 ccgcttgagc gagccgggtg aagatatcgc tggcggtggt tttaactgga gcggataatt
     1141 tactgccctc gatcaatcgg cggatctgct gccaggagcg cggcgcttcc tggcgcggac
     1201 agatgacctg gaattgcgtg gcgcggacgg cgtggaccgt cttcttcgcg gtcttgacgg
     1261 cgaacgtcaa ggttggaatc gtttttagat ccgctttgag cttggccagc ggcaagccaa
     1321 gatcgatcag cgccgcgacg aacatgtcgc cgctgatgcc gccgatgaga tcgccgtagg
     1381 ctaatcgcat gtcgtgctcg tggctcgtgc tcgtggctcg tggctcgtgc tcggaatccc
     1441 tacgatcacg aacacgattc tcaccactcc cggtgcactt ccttgccgct ggtttcgatg
     1501 cggat
//
LOCUS       DATIRS010000856         4736 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1146072, whole genome shotgun sequence.
ACCESSION   DATIRS010000856 DATIRS010000000
VERSION     DATIRS010000856.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4736)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4736)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4736
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1146072"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..761)
                     /locus_tag="VLM90_10820"
     CDS             complement(<1..761)
                     /locus_tag="VLM90_10820"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HSQ13507.1"
                     /translation="MRYRTIGTTGVKVSEIGFGCGNNAVLMVKAPYDEQVKVVRRALD
                     AGITFFDTAFAYGLGKSEENLGRILKDLGVNPVVSTKIRLEADCVSDIKAATIRAVEA
                     GLERLGRERVDFVQLHTRVTQARGMEKRFSLTPQDVLGTGGVANSVIAGFKAMRGRGK
                     VGFFGFSGLGETPALHELVDSGEFHGFQCYYNLLNPSAGQPVPKNFSAQDYGLILERA
                     AAKGMGAFIIRVLAAGALTADPSAGGGGSGQTLSPG"
     gene            complement(781..1473)
                     /locus_tag="VLM90_10825"
     CDS             complement(781..1473)
                     /locus_tag="VLM90_10825"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HSQ13508.1"
                     /translation="MERLLLFDIDGTLTRTENGYLPFNDAILKTFDFAGDIRTVVPDG
                     NTDPLIVQEIFTKAGVEVAVGTEQWLQFTAQLASSYRDHVARGATTVRPLPGADALLQ
                     QLDGVAEFHSSVVTGNFEATAQVKLEAAGLRHYLARGAYASDSDYRPDLPAIARERWE
                     FATARRIAAAQCVIVGDTPKDLQCARANGMKCVLVGTGRYRVEELEYWRPDACLADLS
                     DTQQVVGLLSNL"
     regulatory      1637..1721
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01750"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="ZMP/ZTP riboswitches appear to regulate genes
                     involved in one-carbon metabolism; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="5-aminoimidazole-4-carboxamide
                     ribonucleotide (ZMP)/
                     5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl
                     5'-triphosphate (ZMT)"
                     /db_xref="RFAM:RF01750"
     gene            1831..2973
                     /locus_tag="VLM90_10830"
     CDS             1831..2973
                     /locus_tag="VLM90_10830"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--glyoxylate aminotransferase family
                     protein"
                     /protein_id="HSQ13509.1"
                     /translation="MIKQYLLSPGPTPIPNEVALAMAETMIHHRTPQFNKVFDEAREG
                     LKKLFATKNDVLMLAASGTGAMEASVANLFSPGEKVLVINGGKFGERWFNIANAFGLN
                     PIELKVEWGQAVKVADVERQLKAHPDIQGVMIQASETSTTVLHPVKEIAKLTKNGPLF
                     LVDGVTAVGVVPLPLDEWGIDVLVTGSQKALMLPPGLGFIALSDRAWEKTKTAKLPRF
                     YFDLNLERKNQQKGSGAFTPAVSLIFGVRASLEMIQREGLVNVYARHDRLCRATRAAA
                     KALGLKLLAPDSPSPAATGIYLPEGIDADAVLEYLRDKMNVVLAEGQDQLKGKAIRIA
                     HIGYMGGFDVITAIAALEMALRKFGAEIPLGRGVAAAQEVLLEALP"
     gene            3074..4657
                     /gene="serA"
                     /locus_tag="VLM90_10835"
     CDS             3074..4657
                     /gene="serA"
                     /locus_tag="VLM90_10835"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: protein motif:HMM:TIGR01327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004617 - phosphoglycerate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HSQ13510.1"
                     /translation="MKILVTDSLAPEGLAVFHNAEGFEVDVKIGLKPEELKKICAIYD
                     GWVIRSGTKITAELIEAATHLKVIGRAGVGYENIDADAATQHGIVVMNTPGGNNVTTG
                     EHTIALMMSMARHIPQATASLKSGKWERNKFVGVELCNKTIGVIGLGNVGRIVAERAA
                     GLMMRVIGFDPFIAPENVARMGVEPGTLEEIFAKADFITVHVPLTPDTQGLINKAAFA
                     KMKTGVRIINCARGGIVDEQDLADAIKAGKVAGAALDVYVDEPPAADHPLVKLDQVIT
                     TPHLGASTDEAQLNVAIAVAEQMVDFLARGVVRYAVNVPSVSPELLEVLRPYLTLAEK
                     LGSLHTQMAGALPKEVQVEYRGDVTQYNVAPLTVALLKGLLSPVMESAVNYVNAPVVA
                     KERGIKILESKGEGVGDFTSSIVVKAKNGTANLEVEGAIFGAKHPRIVRVNDFYLEAV
                     PSGYILILQNKDVPGVVGAVGTILGNNGINIAGMELGRSEQGGNAISFTHVDEKVSKK
                     AIDELLALPQIVSAELVKL"
BASE COUNT         1030 a         1442 c         1344 g          920 t
ORIGIN      
        1 ccgggcgaga gggtctggcc gctgccgcca cctccggcgc tgggatcagc ggtcagcgcg
       61 ccggcggcta gtacgcggat gatgaaggcg cccatgcctt tagcggcggc acgttcaagg
      121 atcaaaccgt agtcctgggc gctgaaattc ttcggcaccg gttggccggc gctgggattg
      181 agtaaattgt agtagcattg aaagccgtga aactcgccgc tgtcgaccaa ctcgtgcagc
      241 gccggggtct cgccgagacc gctgaaaccg aagaagccga ccttgccgcg cccgcgcatc
      301 gctttaaaac cagcaattac actattggcg acgccgcccg tgccgagcac gtcttgggga
      361 gtaaggctga aacgcttctc catgccgcgc gcctgagtta cgcgggtgtg caactggacg
      421 aaatcgacac gctcgcggcc gagccgttcg agcccggcct cgacggcgcg gatggtcgcc
      481 gctttgatat cgctcacaca gtcggcttcg aggcggatct tggtcgatac cacagggttc
      541 acgccaagat ctttgaggat acgccccaag ttctcttccg acttgcccag gccgtaggcg
      601 aacgcggtgt cgaagaatgt gataccggcg tccaacgcgc gcctgacgac tttgacctgc
      661 tcatcgtagg gcgctttaac catgagcaca gcattgttgc cgcagccaaa tccgatctcg
      721 gatactttca caccggtggt gccaatcgtt cgatagcgca tgattgcctc caatcaattt
      781 ttacaagttg gaaagcagcc caacaacttg ctgtgtgtcg ctcaggtccg ccagacaagc
      841 atcgggccgc caatactcca gctcttctac ccgataacgg ccggtgccga caagcacgca
      901 tttcatgcca ttggcgcggg cgcactgcaa atctttgggc gtatcgccga cgatgacgca
      961 ttgcgccgcc gcgattctcc gcgcggtggc gaactcccat cgctccctgg cgatcgccgg
     1021 caaatcgggc cggtagtccg aatcgctggc gtacgcgccg cgagccagat aatgcctcag
     1081 cccggccgct tccagtttca cttgcgccgt cgcttcgaaa tttccagtga ccacgctgga
     1141 gtgaaactcc gcgacgccgt ccaattgttg caacagcgca tccgcccccg gcagtggccg
     1201 aacggttgtc gcaccgcgcg ccacgtggtc gcggtagctg ctggcaagtt gcgctgtgaa
     1261 ttgcagccac tgctccgttc caacggcaac ctccacgccg gctttggtaa aaatctcctg
     1321 cacgatcagc ggatcggtat tgccatccgg caccacagtg cggatatcgc cggcgaaatc
     1381 aaatgttttt agaatcgcgt cgttgaacgg cagataacca ttctcagtcc gggtcagcgt
     1441 gccgtctatg tcgaaaagaa gcagtcgttc catggtgaag aagacagaga tttgagacag
     1501 cgaccgcccc acccctcctc ttatctgaaa tctctatctc aattctccgt ctctgtcttg
     1561 ccttgctgtc tctgtctcag gtctctgtct cagcgcgaca ttgactttgc cggcgctacg
     1621 agttaaaagt ttttcgtaag ttttgcgcga ctggcgtcaa tgtggaatcg accacgaggg
     1681 agcgcaaagc attaagacgg ccgaacgcct gggtctctta acgatagagg tccaggcttt
     1741 tttgtggata tgcgccgtac tttaccgccg acgcgacaat ttccacttca aatcctgcca
     1801 tagcgtgata gtttcaaatg gagttgaggc atgattaagc aatatctcct gtcccccggc
     1861 ccgacgccga tccctaacga agtggcccta gcgatggccg agacgatgat tcatcatcgc
     1921 acgccgcagt ttaacaaagt ttttgacgaa gcccgcgagg ggctgaaaaa acttttcgcc
     1981 accaagaacg atgtcctgat gctggccgct tccggcaccg gggccatgga agcgtcggtg
     2041 gccaatctgt tttccccagg cgagaaggtt ctggtcatca acggcggcaa attcggcgag
     2101 cgctggttta atattgccaa cgcctttggc ttgaatccca tcgagctgaa agtcgagtgg
     2161 ggccaggcgg tcaaagtcgc cgatgtcgaa cggcagctca aagcccatcc cgacattcag
     2221 ggcgtgatga tccaagccag cgaaacttcg accacggtgc tccatccggt taaagaaatc
     2281 gccaagctga ccaaaaacgg cccgctcttt ttagtcgacg gcgtcactgc cgtcggcgtc
     2341 gtgccgctac cactcgacga atggggcatc gacgtgctcg tcaccggctc gcaaaaggcg
     2401 ctcatgctgc cgccaggctt ggggttcatt gcgctgagcg accgcgcctg ggagaaaacg
     2461 aaaacggcca agctgccgcg cttttatttc gacttgaatc tcgaacgcaa gaaccagcaa
     2521 aaaggctccg gcgcctttac ccccgcggtg tcgctaatct ttggcgtgcg cgcttcgctg
     2581 gaaatgatcc agcgcgaagg gctggttaat gtctacgcgc gtcacgaccg attgtgccgc
     2641 gccacccgcg ccgccgccaa agcattggga ttaaaactgc tcgcccccga cagccccagt
     2701 ccggcggcca cgggaattta tttaccagag ggcatcgacg ccgacgccgt gcttgaatac
     2761 ttgcgcgaca agatgaacgt cgtcctcgcc gagggccaag atcagctcaa aggcaaagcg
     2821 atccgcatcg cccatatcgg ctacatgggc ggcttcgacg tgatcaccgc catcgccgcg
     2881 ttggagatgg cgctgagaaa attcggcgcc gaaatcccgt tgggccgggg cgtcgcagcg
     2941 gcacaagaag tgttgctgga ggcgctgccc tgaagccgag aggatcgaag ttaatcgaag
     3001 ttagaggata gcccattaac gccatcctca atcatcgatc ccctcgaccg acaaactatc
     3061 catggaacag aaaatgaaaa tcttggtaac cgactccttg gcacccgaag gcttggcggt
     3121 ttttcacaac gccgaaggct ttgaagtcga tgtaaaaatc ggcctcaagc ctgaggaact
     3181 gaaaaaaatc tgcgcaatct acgacggctg ggtgatccgc agcggcacca agattaccgc
     3241 cgagctgatc gaagcggcaa cccatctgaa ggtcatcggg cgcgccggcg tgggctatga
     3301 aaacatcgac gccgacgccg ctacccagca cggtatcgtc gtcatgaaca cccccggcgg
     3361 caacaacgta accaccggcg agcataccat tgcgctgatg atgtccatgg cgcgccatat
     3421 tccccaggcc acagcctcgc tcaagagcgg caagtgggag cgcaataaat tcgtcggcgt
     3481 cgagctgtgc aacaagacca tcggcgtcat cggcctcggc aacgtcggcc gcatcgtcgc
     3541 cgaacgcgcc gccggattga tgatgagagt gatcggcttc gatcccttca tcgcgccgga
     3601 aaacgtcgcc cgcatgggcg tcgagcccgg cacattggaa gagatcttcg ccaaggccga
     3661 tttcatcacc gtgcatgtgc cgctgacgcc cgatacccaa gggttaatca acaaagccgc
     3721 cttcgccaag atgaagaccg gcgtgcggat tatcaattgc gcccgcggcg gcatcgtcga
     3781 cgagcaggat ctcgccgacg ccatcaaagc cggcaaggta gccggcgcgg cactcgatgt
     3841 ttacgtcgac gaaccgcccg ccgccgatca tccgttggta aaactcgatc aagtcatcac
     3901 cacgccgcac ttgggcgcct ccaccgacga ggcccagttg aacgtcgcta tcgccgtagc
     3961 cgagcagatg gtcgactttc tcgccagagg cgtggtccgc tacgccgtca acgtgccgtc
     4021 ggtgagcccg gaactgctcg aagtcctgcg cccctatctc acgctggcgg aaaagctcgg
     4081 cagcctgcac acgcagatgg ccggtgccct gcccaaggaa gtccaggtcg aatatcgcgg
     4141 cgacgtcacc cagtacaatg tcgcgccgtt gaccgtggcc ttgttgaagg ggctgttgtc
     4201 accggtgatg gagtcggcgg tgaactacgt caacgccccg gtggttgcta aggagcgcgg
     4261 catcaagata ctcgagtcca aaggcgaagg agtcggcgat ttcaccagct ccatcgtcgt
     4321 caaagccaag aacggcacgg cgaacctgga agtcgaaggg gcgatcttcg gcgccaaaca
     4381 tccgcgcatc gtgcgcgtca acgatttcta tttggaagcg gtgccgtcgg gctacattct
     4441 catcttgcaa aacaaagacg tgcccggcgt cgtcggcgcg gtgggcacca tcctcggcaa
     4501 caacggcatc aatatcgccg gcatggagtt gggccgcagc gaacagggcg gcaacgccat
     4561 atcgttcacc catgtcgatg aaaaggtctc gaaaaaggcc atagacgagc tattggcctt
     4621 gccgcagatc gtctcggcgg agctcgtgaa actgtgatta ccaggcaacg ggcattaggc
     4681 aataggcaac aggaaaaaca atcttcttga ctattggctg ttgcctgatg cctatt
//
LOCUS       DATIRS010000857         1835 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_752697, whole genome shotgun sequence.
ACCESSION   DATIRS010000857 DATIRS010000000
VERSION     DATIRS010000857.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1835)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1835)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1835
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_752697"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            363..1565
                     /locus_tag="VLM90_10840"
     CDS             363..1565
                     /locus_tag="VLM90_10840"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ13511.1"
                     /translation="MRLPPALRYRDFRLFTIGYLPAETGEYIHFVVQNWLAWELTRSA
                     FALGLLGFCEFAPRFIFGPIGGVVADRMDRLKLLKLSRIANLLHSLIFAALIFTGQLQ
                     FWHIVVLVVFMAIVSSFSTAAQQVVIVNLVPQEGVVSALALNSATHNLTKVIGPSIGG
                     VLLTVIGPGPCILIQAVTVVGMLITLWRMQPAAVPANLAKGDWLKDIVEGISYLRENR
                     RLFSTILTTYSNGFFGISYAQFLPYFAQEVLHVGPAGYGVLVSAPGVGAVLISFFLST
                     HARLRGMRRLLVGASLIYAVAIFLFALSPYYFLSIILLAIVGSMQMSYRVLARAIIQE
                     ECPDHMMGRAMSLFFLDRGFGSLGAIGIGSVAALMPVPFAVAASALACGLVSWILPKA
                     ANKPRSLL"
BASE COUNT          312 a          512 c          533 g          478 t
ORIGIN      
        1 cccttcggct ccgctcagga taaactccgc cgaggaatct cgtcttcgta agtgacagta
       61 aagacgagat ccctcactgc gctcgggatg acagaaagaa agactcccga attgcgacgg
      121 tctgtaagcg ggaaagttta agcgctgccg ggcgaagaat ccatatatcc aaagtacggt
      181 gacccgtgcc gggaaaacga ctatggcgcc gcagcgttgg ctggcttcag gaatccagga
      241 tcgtgcctcc ctcggccggc gctatgtgtg aaactgcggc atctggttaa cgaagtggac
      301 ttcgcggcga gctgagaata tagtttctac tgcatgtttt caccaaggat tcctatcgcc
      361 gcgtgagatt accgccagca ctgcgctacc gcgactttcg cctgtttacg atcggctact
      421 taccggcgga gaccggcgag tatattcact ttgtcgtgca aaattggctc gcctgggaac
      481 tcacccggtc ggcctttgcc ctgggtcttt taggattctg tgagtttgcg ccgcgcttta
      541 ttttcggtcc catcggcggt gtcgtcgccg atcgcatgga ccggctgaag ctgctcaagt
      601 tgagccgcat cgctaatttg cttcacagcc tgatttttgc agcgctgatt ttcaccggtc
      661 agctgcagtt ttggcatatt gtcgtgctgg tcgtgttcat ggcgatcgtc agctcgttta
      721 gcacggcggc gcaacaggtg gtgatcgtca atctggtgcc gcaggagggc gtcgtcagcg
      781 ccttggcgct caactcggcg acccataact tgactaaagt gatcgggccg tcgattggcg
      841 gagtactttt gacggtgatc ggaccggggc cctgtatttt aatccaggcc gtcacagttg
      901 tcggcatgtt aatcaccctg tggcgcatgc aaccggcggc agtgccggcg aatctggcga
      961 aaggcgattg gctcaaagac atcgtcgaag gaatttctta tctgcgtgag aaccgccggt
     1021 tgttttcgac cattttgacg acctactcca acggtttctt cggcatttcc tatgctcagt
     1081 ttctgcccta ttttgcccag gaggttttgc atgtggggcc ggcgggttac ggtgtgctcg
     1141 tctcggcgcc gggcgtcggt gcggtactga tcagcttttt tctttcgacc cacgcgcggc
     1201 tgcgcggcat gcgccgtcta ttggtcggcg ccagtttaat ttatgccgtc gcgatattcc
     1261 tattcgcgct gtcaccttac tactttcttt caatcatcct tctagccatt gtcggctcca
     1321 tgcagatgag ctaccgcgtg ctcgctcggg cgatcattca agaggagtgt cccgatcata
     1381 tgatgggccg cgccatgagt ttgttttttc tcgaccgcgg cttcggttcg ctcggcgcca
     1441 tcggcatcgg cagtgtggcg gcgctcatgc cggtgccttt tgccgtggcg gccagcgcgc
     1501 tcgcctgtgg cttggtgtct tggatcctgc cgaaagccgc caacaaacca agatctttgc
     1561 tttgattgac tcgctagtta ccttataatt caagcttgtg actcggatgt gaggattatg
     1621 caggagcttg gtgtcattct tttagccgct ggacagggta cgcggatgaa atccgctctg
     1681 cccaaggtgc tccatcccct cgccggacgg gcgctttttc ttcatgcttt gggcacggcg
     1741 cagcggcttt cgccggcgcc tgtcgccatc gtcatcggtc atggcgccga cttggtgcgc
     1801 caggctcata gcggcaccgc ggtcgcttgg gcggt
//
LOCUS       DATIRS010000858         1866 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_358757, whole genome shotgun sequence.
ACCESSION   DATIRS010000858 DATIRS010000000
VERSION     DATIRS010000858.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1866)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1866)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1866
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_358757"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..238
                     /locus_tag="VLM90_10845"
     CDS             <1..238
                     /locus_tag="VLM90_10845"
                     /inference="COORDINATES: protein motif:HMM:NF013921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HSQ13512.1"
                     /translation="RRRMRLSKVLGRFKMVSAKQINALRGSSGQPLWQRNYYEHVIRD
                     DRSLNRIRQYIADNPARWEFDLENPAASARRGDS"
     gene            269..1714
                     /locus_tag="VLM90_10850"
     CDS             269..1714
                     /locus_tag="VLM90_10850"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ13513.1"
                     /translation="MPKSLRTFLDDFRRLYPSEVVSISKPVNPLTYDITAIVKQLGAL
                     KKFPVLIFENPLNAHGQQTDMKVVMSAENSQKKIQVAMGLPAEMTRAEMARECLRREA
                     GKIGPVIVSKDAAPVKEIIRTGDQVDLYELPLLKHHEMDGGPYIDMSSVAKDRNTGVY
                     NCSYHRMEVKDRNHTGFLMTLQHMWRIFRSHEEAGEECPVATVIGHHPAYQMGACFGG
                     SFDISEYDIIGGYMREPLRLTPSETWGERLLVPADAEIVIEGALLPGKRMVEGPFGEV
                     NGYLGVQGYQQSAHYEVRAITRRRGALHTSILTPEGDKPWMDLAREGAYLRRASEAVP
                     SVLAVCTSGRHALLNVFISMKKISEGDPGRAAAAVLTWDWCKNVFVFDEDINVYDPTE
                     ILWAIATRVQPHLQVSIIKEIMRGSLIDPSMVDARKTSAMIVDATKPLDRPFSPVSKC
                     PDDAMARIRIEDFVPGDVLQHIPTDRTTYWA"
BASE COUNT          406 a          506 c          567 g          387 t
ORIGIN      
        1 ccgccggcgc atgcggttat cgaaggtcct cggccggttt aaaatggttt cggcgaaaca
       61 aatcaatgca ttacgcggat cgtcaggcca gcccctgtgg caacgtaatt actacgaaca
      121 cgtcatccgt gacgaccgat ccctgaaccg gatccgacaa tacatcgccg ataacccagc
      181 gcgatgggaa tttgacctgg agaatccggc cgcgtctgca cgtaggggcg attcgtgaat
      241 cgcccgtccg tagttgggaa gcaattccat gcctaagagt ctaagaacct tccttgacga
      301 ctttcgccgg ctctatccga gcgaagtcgt ttcgatttcc aagccggtca atccgctcac
      361 ctatgacatc accgccatcg tcaagcagct tggcgcgctt aaaaagtttc cggttttgat
      421 attcgagaat ccactcaacg cccatgggca gcagacggac atgaaggtgg tcatgagcgc
      481 tgagaattcg cagaagaaga ttcaggtggc gatggggctg ccggcggaga tgacgcgggc
      541 ggagatggcg cgggaatgtt tgcgccggga ggcggggaag atagggccgg tgatcgtcag
      601 taaagatgcg gcgccggtga aggagattat tcggaccggc gatcaagtcg atctctacga
      661 acttccattg ctcaagcacc acgagatgga cggtgggccg tatatcgaca tgtcgagcgt
      721 cgccaaagac cgcaacaccg gcgtttacaa ctgctcctat caccgcatgg aggtgaagga
      781 tcgcaaccac accggcttct tgatgacgct gcagcatatg tggcggatct ttcgcagtca
      841 cgaagaagct ggcgaggaat gtccggtggc gacggtgatc ggccatcatc cggcctatca
      901 aatgggcgcc tgttttggtg gttcgttcga tatcagtgag tacgatatca tcggcggcta
      961 catgcgggag ccgctgcgcc tgacgccgtc ggaaacctgg ggcgaacgcc tgctggtacc
     1021 ggccgatgcg gaaatcgtca tcgaaggggc gctgcttccc ggcaagcgca tggtcgaagg
     1081 accgtttggc gaagtgaatg gttatctcgg cgtgcaaggc taccagcaat cggcacatta
     1141 cgaagtgcgc gccatcaccc ggcggcgcgg tgcgctgcac acgtcgatcc tgacgccgga
     1201 aggggacaag ccgtggatgg acttggcgcg cgagggcgct tacctgcgcc gcgccagcga
     1261 agcggtgccg agcgtgctgg cggtctgcac cagcgggcgg catgcgctgc tcaacgtttt
     1321 tatttcaatg aaaaaaatct ccgagggcga tcccggccgc gccgcggcgg cggtgttgac
     1381 ctgggactgg tgcaagaatg tttttgtctt cgacgaagac atcaacgtct acgatccgac
     1441 ggaaatcctc tgggcgatcg cgactagagt gcagccgcac ctgcaagtgt caatcatcaa
     1501 ggagatcatg cgcggcagct tgatcgaccc gtccatggtc gatgcgcgca agacctcggc
     1561 gatgatcgtc gatgccacga agcccttgga ccggccgttc tcgccggtgt cgaaatgtcc
     1621 cgacgatgcc atggcgcgaa ttcgcattga agatttcgtg cccggggatg tcttgcagca
     1681 tattcccacc gaccggacga cttattgggc gtaacgaatt gaacacgttc aagccgttca
     1741 aatcgttaaa atcgttcacg ccgtttcgga ggtttgaact gctggttact cttttcaatg
     1801 tttttgaacg gcttatccgg aaacggtttg aacggtttga actatttgaa cgagcctctc
     1861 gcaagg
//
LOCUS       DATIRS010000859         3369 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_63293, whole genome shotgun sequence.
ACCESSION   DATIRS010000859 DATIRS010000000
VERSION     DATIRS010000859.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3369
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63293"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..886)
                     /locus_tag="VLM90_10855"
     CDS             complement(<1..886)
                     /locus_tag="VLM90_10855"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HSQ13514.1"
                     /translation="MDFSRRTIIKAGLGMGVSLLVRPEYLAAQTQPLIQKKIPSSGEA
                     MPIIGIGTARRYEDVKNDSEKVPLRETIRQFQALGEKVIDSSPSYGTAEAVVGELVDG
                     LKVRDSLFLATKVSLRNVGRDEGIKQIEESFKKLRTNRIDLLAVHNLRDTDVQLKTLR
                     EMKAAGRIRYVGITTSFDNQYGEFEQVMKKETLDFIQVDYALDNRDAGERIIPLAPDR
                     GMGVMINLPFGRGRLFKAVQGKKLPEWTGEFDCATWAQFFLKYIVSHPAITCAVPGMA
                     RAEYVVDNLGAARGRLPDA"
     gene            1038..2018
                     /locus_tag="VLM90_10860"
     CDS             1038..2018
                     /locus_tag="VLM90_10860"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrtA/SsuA/CpmA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HSQ13515.1"
                     /translation="MTAIKSLASFVFGMTLLVESQPVFSQTLDKIRLGYSGTGINNYV
                     LDMGKRTGIFKKNGLDIEVVYVNSGSLLSQALIAGTFDVSFSQGSEAMVAKIRGADVR
                     IAAVAANRFNHVYLAAPSITSIKQLKGKKVAVSRFGSGSHFQTNLALKEGGLDPEKDV
                     TILQIGNSGARITAILSGVVDGTIMAADFVPRAKREGFNVLADLADTKIEYPFLSLNF
                     IGSYLDRNQKLVKALIKGMSESIRALQSDPATAKTVIRSALRTDDVATVDYALARSVQ
                     VLDRRPVPTPGGIQTVLDELGKDAKTKAWKFDDFVDLRALRELEKEGFFK"
     gene            complement(2020..>3369)
                     /locus_tag="VLM90_10865"
     CDS             complement(2020..>3369)
                     /locus_tag="VLM90_10865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13516.1"
                     /translation="LLGGAILATTMIYQTQAVNARVDMTLCFFVTLSLILFYAIYRGF
                     LRHPMWPYAMYLLVGLATLSKGPLGIVLPGLVIAVFLALKRNWKMLFKFAFHPGVLLA
                     VLLVAGWYGMAISRGGEGFVDRQLLSENLRRFVGGSGHSHPVYYYLSYLFSLAAPWGL
                     FYPFMFWDWRKKSGDDNDDVLFLQTWFGVMLLFFSLSSGKRAVYLLPIYPALALLLAV
                     WVHRQARFDIVRTWFLRLISGVAAITALILLLIALGDLWTHDPVWLFDPIEKLLKPKD
                     RANFLVIVNQIAGWGWKFDAVALAWAALWSLFGYYLWRGRMIAASGSLVALWIIFAFL
                     SRGLVEVKIAETKSYRDFMIEVNRLVLPSDKLVLSGGFNGDAVVFYRGRAIEVAERPV
                     DSTAAQISDGDGYIITTEKVWNRLRQAQPQLTPPLLRSRGSGPEGDAPLVLLRAVLP"
BASE COUNT          786 a         1013 c          922 g          648 t
ORIGIN      
        1 ccgcatctgg cagccggccg cgcgccgcgc caagattgtc gacgacgtac tcggcgcgcg
       61 ccatgccggg cacggcgcag gtgatggcgg gatgagagac gatatatttc aaaaagaact
      121 gcgcccaggt cgcgcagtcg aactcgcccg tccactccgg caatttcttg ccttgcacgg
      181 ctttgaacag acggccgcgg ccgaagggta agttgatcat cacgcccatg ccgcggtcgg
      241 gcgccagcgg aatgatccgc tcgccggcat cgcggttgtc gagagcgtaa tcaacctgga
      301 tgaaatcaag ggtttctttc ttcatcacct gctcgaattc gccgtattgg ttatcgaacg
      361 acgttgtgat gccgacgtag cgaatccgcc ccgccgcttt catctcgcgc agggttttca
      421 actgcacgtc ggtgtcgcgc agattatgca cggcgagcaa atcgatccgg ttagtgcgca
      481 gtttcttgaa cgactcttcg atttgtttga taccctcatc gcggccgacg ttgcgcaagc
      541 tcaccttggt ggcgagaaac agtgagtcgc ggactttcag accatcgacc aattcgccga
      601 cgacggcctc cgccgtgcca taggatggcg agctgtcgat caccttctcg cccagcgcct
      661 ggaactggcg gatggtctcg cgcagcggca ctttctcgct gtcgttttta acatcttcat
      721 aacggcgcgc ggtaccgatg ccgataatcg gcatcgcctc gcctgaggac gggatctttt
      781 tctgaatcag cggttgggtc tgcgccgcca gatactccgg cctaactagc agcgaaacgc
      841 ccattcccaa gccggccttg atgatggtcc gacgactgaa gtccatagct tctccttatt
      901 actcgcagca tgatgtagca ccagtcgtca gaccccgcaa gacaatggcg cggtgttgga
      961 gctcaggttt tttctcttgt gcttgccatc cgccggcatt acgatgcgcg cacttcgcca
     1021 tagaggagat tgattcaatg acagccatta aatcgctcgc cagtttcgtg tttggtatga
     1081 ccttgttggt ggagtcccag ccggttttta gtcaaaccct cgacaagatt cgcctgggtt
     1141 atagcggcac gggcatcaac aactacgtcc tcgatatggg caaacgcaca ggcatattca
     1201 agaagaacgg cctcgatatc gaagtcgttt acgtcaacag cggttcgctg ctcagccagg
     1261 cgcttatcgc cggtaccttc gatgtatctt tttcgcaagg ctcggaggcg atggtggcga
     1321 agatacgcgg cgccgacgtg cgcatcgccg ccgtcgccgc caaccgtttc aaccatgtct
     1381 atctcgccgc gccgtcgatc acctcgatca agcaattgaa aggcaaaaag gtcgccgtca
     1441 gccggttcgg ttccggctcc cacttccaga ccaacttagc gctcaaggaa ggcggcctcg
     1501 atccggaaaa agatgtcact attttgcaga tcggcaactc cggcgcgcgc atcacggcga
     1561 tcctgagcgg cgtcgtcgac ggcacgatca tggcggccga cttcgtgccg cgcgccaaac
     1621 gggaaggttt caacgttctc gccgatctcg ccgacaccaa aatcgaatat ccatttttat
     1681 cgctcaactt catcggcagc tatctcgatc gtaatcagaa gctggtcaag gcgttgatca
     1741 aaggcatgtc cgaatcgatc cgcgccctgc agagcgaccc tgccacggcc aagaccgtga
     1801 tccgttcggc gctgcgcacg gatgatgttg cgacggtgga ctacgccctc gcgcgtagcg
     1861 tccaggtact ggaccgccgc cccgtcccga cgccgggcgg catccagacc gtgcttgacg
     1921 aattgggcaa agatgccaaa accaaagcgt ggaagttcga cgacttcgtc gatctgcgcg
     1981 cgctgcggga actggagaag gaaggatttt ttaaatagcc tagggcagga ccgcacgcaa
     2041 cagcaccagc ggcgcgtcgc cttcaggccc gctgccgcgg ctgcgtagca acgggggcgt
     2101 caattgaggt tgagcttgcc ggagcctatt ccacactttc tcggtggtga tgatgtagcc
     2161 gtcgccgtca gagatctgcg ccgcggtgga atcgacgggc cgttcggcca cctcaatcgc
     2221 cctgccgcga tagaacacca cggcatcgcc attgaagccg ccggacaaaa ccaacttgtc
     2281 cgaaggtagc accagacggt tgacttcaat cataaagtca cggtagctct tggtctcggc
     2341 gatttttacc tccaccaaac ctcggctcaa aaacgcgaaa ataatccata gcgccaccaa
     2401 cgagccgctg gccgcgatca tgcggccgcg ccagaggtaa tagccgaaca gcgaccagag
     2461 cgcggcccag gccagcgcga cggcatcgaa cttccaaccc caaccggcga tctgattgac
     2521 gatgacgaga aaattagcgc ggtctttggg cttgagcaat ttttcgatgg ggtcgaacaa
     2581 ccatactgga tcatgggtcc ataaatcgcc cagggcgatt aatagcagga tcaaggccgt
     2641 gatcgcagca acgccggaaa tcagccggag aaaccaagtt cgaactatat caaaccttgc
     2701 ctggcgatga acccacacgg ccaagagcag cgccaacgcc ggatagatcg gcaacagata
     2761 aaccgcccgt ttccccgacg acagcgagaa aaacagcagc atgacgccga accaggtttg
     2821 gagaaacaac acatcatcat tgtcgtcgcc agatttcttg cgccagtccc aaaacataaa
     2881 cggatagaac aatccccaag gcgccgcgag actgaagaga taagacaaat agtaataaac
     2941 tggatggctg tggccggaac cgccaacaaa gcggcgcaaa ttttccgaca gcagttggcg
     3001 atcgacgaaa ccctccccgc cccggctaat cgccatgcca taccagcccg cgaccagaag
     3061 tactgcgagc agcacgccgg gatgaaaggc gaatttaaat aacattttcc aattacgttt
     3121 gagcgcgagg aagaccgcga tcaccagccc cggcaaaaca atccccaacg gccctttgga
     3181 aagcgtcgcc aaaccaacca gcaggtacat cgcatagggc cacatgggat ggcgcaggaa
     3241 accgcggtag atggcgtaga acaggatcaa actcagcgtg acgaagaaac ataaagtcat
     3301 atcgacgcgc gcgttgaccg cctgggtctg atagatcatc gtcgtcgcca ggatcgcgcc
     3361 gcctaacaa
//
LOCUS       DATIRS010000860         2297 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1736299, whole genome shotgun sequence.
ACCESSION   DATIRS010000860 DATIRS010000000
VERSION     DATIRS010000860.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2297)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2297
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1736299"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..858
                     /locus_tag="VLM90_10870"
     CDS             <1..858
                     /locus_tag="VLM90_10870"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13517.1"
                     /translation="GLFEKYGLDGNLVYIASGVTSVNALLGGSVDIIAASGSSAVGAA
                     ARGAQLVIIASLGHIAYKLIAHPSITSVQGLRGKIIGSSRIGAGTDFALQRLLPKLGL
                     TPGKDVKLLPAGISESDRRLLMLVQGKIDATLGTEDNLLQLAARGMKFNVLADVYEAG
                     VYTTGSDIATSRTLLKQKPRQLKAFLMAITEGTYIGRTQKEVALRLYRKYLKIEDPKM
                     LDSMHKNYLLGSIPARPFPKEEAIQNDIEDLSASYPHLKGRRAGEFLDISLLKSMEDE
                     GFFKKLYGK"
     gene            880..1302
                     /locus_tag="VLM90_10875"
     CDS             880..1302
                     /locus_tag="VLM90_10875"
                     /inference="COORDINATES: protein motif:HMM:NF017482.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NFACT RNA binding domain-containing protein"
                     /protein_id="HSQ13518.1"
                     /translation="MKLAKPSILQYELVGGWTLLVGGTDADNDYLSTQIAKPNDWWFH
                     ADGVPGSHVILRARADAEPGRDTLRQAAAVAAYHSKARNAGTTGVHCTRARYVKKPRG
                     VKTGTVQVARGDTLRVRPDVGGATRVATSIAVDQDTDK"
     gene            1360..1482
                     /locus_tag="VLM90_10880"
     CDS             1360..1482
                     /locus_tag="VLM90_10880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13519.1"
                     /translation="MIFAIREMARRRYELDAQVVCIDGGFIDELIGNSSEGTAF"
     gene            1643..1930
                     /locus_tag="VLM90_10885"
     CDS             1643..1930
                     /locus_tag="VLM90_10885"
                     /inference="COORDINATES: protein motif:HMM:NF013691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HSQ13520.1"
                     /translation="MKQPYVYILASQRNGTLYVGVTSDLVQRVWQHKSDQAEGFTKRY
                     GVHMLVWYEACGTMDVAIAREKAIKEWQRAWKIRLIQEINPEWKDLYDELL"
BASE COUNT          485 a          650 c          701 g          461 t
ORIGIN      
        1 ggcctgtttg aaaagtatgg tctcgacggc aacctggtct acatcgcctc tggggtgacg
       61 tcggtgaacg cattgctcgg cggcagcgtc gacatcatcg cggcgtccgg ttcttctgcc
      121 gtcggcgcgg cggcgcgcgg cgcgcaactg gtgatcatcg ccagcttggg tcatatcgcc
      181 tacaaactga tcgctcatcc gtcgatcacc tcggtccaag gactgcgcgg caagattatc
      241 ggctcgagcc gcatcggcgc ggggaccgat ttcgcgctgc aacggttgct gcccaagttg
      301 ggtctcacgc ccggcaaaga tgtcaagctg ctgcccgccg gcatcagcga atcggaccgc
      361 cgcctgttga tgctggtgca gggcaagatc gatgcaaccc tcggcaccga ggacaatctc
      421 ctgcagctcg ccgctcgcgg catgaaattc aacgtcctgg ccgatgtcta cgaggccggg
      481 gtgtacacca ccggcagcga tatcgccacc agccgcacgc tgcttaaaca aaagccgcgc
      541 cagctcaaag cctttctcat ggcgatcacc gaaggcacct atatcggacg cacccagaaa
      601 gaggtggcgc tacggctcta ccggaagtat ctgaagatcg aagacccaaa gatgctcgac
      661 tcgatgcaca agaattactt gctcggctcg atcccggcgc ggccgtttcc caaagaggag
      721 gcaatccaga acgacatcga agatctgagc gctagttatc ctcatctcaa gggccggcgg
      781 gccggcgagt tcctcgatat ttctttgctg aaaagcatgg aggacgaggg gttcttcaaa
      841 aagctttacg gtaaatagcc gctggcggga ccgccgattt tgaaactagc taaaccgagc
      901 attctccaat atgagctcgt tggcggctgg acccttctgg tgggcggcac cgacgccgat
      961 aacgactatc tcagcacgca gatcgccaaa cccaatgact ggtggtttca cgctgacggc
     1021 gtgccgggaa gccatgtgat cctgcgcgcg cgagcggatg ccgagccggg gcgagatacg
     1081 ctgcggcaag cggcggcagt ggcggcctat cacagcaaag cgcgcaacgc cggcaccacc
     1141 ggcgtgcatt gcacccgcgc gcgttatgtg aaaaagccgc gcggcgttaa gaccggcacg
     1201 gtccaggtgg cgcggggcga tacgttgcgg gtgcgccccg atgtcggcgg cgcaacgcga
     1261 gtggccacat caatagccgt tgaccaagat accgacaaat aggcagcgaa catcacgcag
     1321 acactcaccc tcgtctaagt tgaccccgac cgtttgccgg tgattttcgc tatccgcgag
     1381 atggcgcggc gccgctacga actcgacgca caggtggtct gtatcgatgg cgggtttatc
     1441 gacgagctga tcgggaattc gtccgaaggc acggcatttt gatccgtcat tccggcgtag
     1501 gccggaatcc agggagtggg tggtctcttt tcgcatgtcc gactgaagaa tggacaccgg
     1561 cctccgccgg tgtgacgagt aggaagtggc gttgttcgcg ggctttgacg ggatacttta
     1621 gggcttgtac gctactcggg ccgtgaagca gccctatgtc tatatccttg ccagccagcg
     1681 aaacggcacg ttatatgtag gtgtaacatc ggatttggtc cagcgcgttt ggcagcataa
     1741 atctgatcag gccgaaggct ttaccaaacg ttatggggtg catatgttag tttggtacga
     1801 agcctgcgga acgatggatg ttgcgattgc ccgcgagaaa gcgatcaagg aatggcaacg
     1861 cgcttggaag attcgtctga ttcaagaaat taatccggag tggaaagact tgtacgatga
     1921 gttactgtaa ttgggtttcg agttccactc tatttctgtt gcgttgccga cgatcccaat
     1981 ccgtcattcc ggcgcaggcc ggaatccagg tggggaaggg tggcggttcg agtgtcgata
     2041 agactcggtc atggacattc ggccttcgcc ggtgtgacga atccccaccc gcaaggcatc
     2101 tcgtttattc gtgaacgcaa tttcattgtg ctgcggaggt acgatcatga ttgccgctga
     2161 agagaaccag cttctaaccc aaaccgatcc aggcaccccc tgcggcgcgc tgatgcggcg
     2221 ctactggcag ccggtggcgc tgagcgaaga gttgcccgcc ggcgcggcgc cgatcaaagt
     2281 taagattctc ggcgaag
//
LOCUS       DATIRS010000861         1967 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_63349, whole genome shotgun sequence.
ACCESSION   DATIRS010000861 DATIRS010000000
VERSION     DATIRS010000861.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1967)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1967)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1967
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63349"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..918)
                     /locus_tag="VLM90_10890"
     CDS             complement(<1..918)
                     /locus_tag="VLM90_10890"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: protein motif:HMM:NF006587.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
                     /protein_id="HSQ13521.1"
                     /translation="MNRRVVVTGMAGISPIGNDWPTVRARLASYRNAIIRMEEWSGYD
                     GLHTQLGAPAAEFKLTERYTPKATRSMGRVALMATRASELALSDAGLLDDPLLKSGQL
                     GIAYGSSTGTPKAICDFGKMIDERSTRGISATTYIKMMGHTAPVNLGVFLGVTGRIIT
                     TSSACTSGSQGIGYAYETIRAGHQIAMIAGGAEELCATEAAVFDTLFATSVRNDAAET
                     TPRPFDAERDGLVLGEGAGTLILEEQEHARGRGARIYAEVVGFGTNSDGAHVTHPSAS
                     TMQKAMELALANADLPASAIGYINAHGTGT"
     gene            complement(915..1640)
                     /gene="fabG"
                     /locus_tag="VLM90_10895"
     CDS             complement(915..1640)
                     /gene="fabG"
                     /locus_tag="VLM90_10895"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: protein motif:HMM:TIGR01831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HSQ13522.1"
                     /translation="MNKSVLVTGSSRSIGKAIALRLARDGYDIVVHCHSRRAEADGVA
                     QAVVDLGCAARVLQFDIGERATVATALAGDIAQHGCYYGVVCNAGVIRDNVFPAMRGE
                     DWDTVLKTNLDGFYNLLNPLIMPMVRRRAPGRIVTMASVAGLIGNRGQVNYSAAKAGI
                     IGATKALALELAKREITVNCVAPGLIETDMIAGVPLDEALKLIPARRVGKPEEVAAAV
                     SFLLGDDAAYITRQVISVNGGLA"
     gene            complement(1633..>1967)
                     /locus_tag="VLM90_10900"
     CDS             complement(1633..>1967)
                     /locus_tag="VLM90_10900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13523.1"
                     /translation="FCAQGGVGAWVGLEYMAQAIGAYAGYTARLRGEPVKIGFLLGTR
                     RYECIRPLFAIGSLLKVCVKRVVQIDDGLASFDCHIDDDHGPLANANVTVFQPADDSA
                     VITEAGHE"
BASE COUNT          378 a          630 c          572 g          387 t
ORIGIN      
        1 cgtgccggtg ccatgggcat tgatgtagcc gatcgccgac gccggcaaat cggcattggc
       61 caatgccagt tccatggctt tttgcattgt cgacgcgctg ggatgggtaa cgtgcgcacc
      121 atcgctgttg gtgccgaaac ccacgacttc ggcatagatg cgcgcgccgc gcccgcgcgc
      181 atgctcttgt tcttcgagaa tcagagtgcc cgcgccttcg ccgagaacca ggccatcgcg
      241 ctcggcgtcg aaggggcggg gcgtggtctc ggcggcgtcg ttgcgcacgc tggtggcgaa
      301 caatgtgtcg aataccgcgg cctcggtggc gcacaattct tcggcgccgc cggcgatcat
      361 cgcgatttgg tgcccggcac gaatcgtttc ataggcatag ccgataccct ggctgcccga
      421 agtgcacgcg ctggaagtcg taatgatgcg cccggttacg ccgagaaata cgccaagatt
      481 caccggcgcg gtatgcccca tcatctttat atacgtggtc gcgctgattc ccctggtgct
      541 tctttcgtcg atcattttgc cgaagtcgca aatcgccttg ggcgtgccgg tggacgaacc
      601 gtaagcaatg ccaagctggc cgctcttgag cagcggatcg tcgagcagac cggcgtcgct
      661 gagcgccaat tcactggcgc gggtcgccat cagagcgact ctgcccatgc tcctcgtcgc
      721 cttgggggtg taacgttcgg ttagtttaaa ctccgctgcg ggcgcgccga gctgggtgtg
      781 aagtccgtcg tagccggacc actcttccat ccggatgatg gcgttgcgat aactggccag
      841 gcgcgcgcgc acggtgggcc agtcgttgcc gatcgggcta atccccgcca tcccggttac
      901 gacgacacgt cgattcacgc caatcctccg ttcacggaaa tcacttggcg ggtgatgtag
      961 gcggcatcgt ccccaagtag aaaactgacg gcggcggcta cttcctccgg cttgccgacg
     1021 cggcgcgctg gaatgagctt gagagcctcg tctaacggca caccggcgat catatcggtt
     1081 tcaatcaagc cgggcgccac acaattgacc gtaatctcgc gtttggccag ctccaacgcc
     1141 aacgccttgg tggccccgat gatcccagct ttggcagcgc tgtagttgac ctggccgcga
     1201 ttgccgatca acccggcaac cgacgccatt gttacgatgc ggccgggcgc gcgccggcgc
     1261 accatcggca taatcaatgg attgagcaag ttgtaaaatc catccaggtt ggttttcagc
     1321 acggtatccc aatcctcgcc tctcatcgca gggaaaacat tatcacggat cacgcccgcg
     1381 ttgcagacca cgccataata acatccatgc tgcgcgatat cgcctgccag agccgttgcg
     1441 accgtcgccc gctcgccaat atcgaactgc agcacgcgcg cagcgcaacc gagatcgacg
     1501 acagcttgcg caacgccatc agcctcggcg cggcggctgt gacagtgcac gacgatatcg
     1561 taaccgtcgc gcgcgagacg cagtgcgatc gccttaccga tgctgcggct cgaaccggtc
     1621 accaatacgc tcttattcat gcccggcttc cgttattacg gcgctgtcgt cggccggttg
     1681 aaagaccgtc acgttggcgt tggccaacgg cccgtggtcg tcgtcgatat ggcagtcaaa
     1741 agacgctaag ccatcgtcga tctgcactac tcgcttgacg caaaccttca gtagactccc
     1801 tatagcgaac agcggccgaa tgcattcata acgcctcgtg ccgagcagaa aaccgatttt
     1861 gaccggctcg ccgcgcaaac gggcggtata tccggcatag gcgccgatcg cttgggccat
     1921 atactccaaa ccgacccagg cgccaacgcc accctgcgcg caaaaca
//
LOCUS       DATIRS010000862         2608 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_63365, whole genome shotgun sequence.
ACCESSION   DATIRS010000862 DATIRS010000000
VERSION     DATIRS010000862.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2608
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63365"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..672)
                     /locus_tag="VLM90_10905"
     CDS             complement(<1..672)
                     /locus_tag="VLM90_10905"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSQ13524.1"
                     /translation="MRAQFDTCLAAIRTFAVKRPLGAAGAAVVLLMILAALFAGLVAP
                     YDPLDNDYGAMFQAPGAAHWLGTDSFGRDVLSRLLYGSRTALWVGFCASLFGTTLGAI
                     FGVSCAYFGGRVDLVMQRFMDVLLSFPLIVLALTVVAILGGGVWNVIFAIAIPMIPRA
                     ALVVRSSALALRQMLFVEAALTLGAGHWRIIFRHMLPNVMSPYLILLTAFLGQAILLE
                     ASLSFL"
     gene            complement(687..1640)
                     /locus_tag="VLM90_10910"
     CDS             complement(687..1640)
                     /locus_tag="VLM90_10910"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSQ13525.1"
                     /translation="MGQYILKRLLLMIPTLFGVAVLVFFMLRVAPGAVVELKYAGSGT
                     FAPRAAIERERAQLGLDKPQWQQFAVWTWGIVRLDFGTSMWTGRAIADEIKIRLELSL
                     QLALMATLVAVLIAIPFGTLAALKQDTWIDYLVRVFAIGGLAMPSFWLGIVMILGFLL
                     VFQWMPPLTFTSFFTDPWANLTQLFWPALAVGYRYSAMATRMTRSAVLEVLREDFVRT
                     ARAKGLWERAVVVKHALRNALLPIVTVIGLEFAFLIGGLVVTEQVFNLNGIGMLFVES
                     ISRRDYTMTQALVLLVSFAFIFMNFLIDLLYAWLDPRIRYQ"
     gene            complement(1747..>2608)
                     /locus_tag="VLM90_10915"
     CDS             complement(1747..>2608)
                     /locus_tag="VLM90_10915"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13526.1"
                     /translation="QVMVEFSGFNPAARDDVVKSLGSKAVVQESPWACNLMVVFNNEK
                     KPFSDARVRRALNLAIDRNEASKALAQISVMKFIGGLYRPGSEFATPAAEVAKLPGFG
                     KDINAARTEAKRLLKEAGVPDGFSFVLKNRNVREPYEVTGVFVVDQWRKIGLNVTHTP
                     QEGGPYFNDFRQGNYDVGIDFMCEFMDEPDLYLVKYLSSDKSPLNYARYKDPVVDELF
                     ERQSRMLDSKDRLPLLRQIEKRLLGEQVYQFPVLWWQRTVPHNDRLKGWKIGPSHYVN
                     QDLRDVWLGQ"
BASE COUNT          632 a          798 c          732 g          446 t
ORIGIN      
        1 gagaaacgac agtgaagctt cgagcagaat cgcctggccc aagaaggcag tcagcaggat
       61 caaatagggc gacatcacat tgggcagcat atggcgaaat ataatccgcc aatggccggc
      121 gcccaaggtc aacgccgctt cgacgaacag catctgccgc aatgccagcg cgctgctgcg
      181 caccaccaag gccgcacgcg ggatcatcgg tatggcgatc gcaaagataa cgttccagac
      241 gccgccgccc aggatcgcca cgaccgtcag cgccaggacg atcaacggaa acgacaacaa
      301 gacatccatg aagcgctgca tgaccagatc gacgcggccg ccgaagtaag cgcagctcac
      361 gccaaagatc gcccccagcg tcgtgccgaa gagcgacgcg caaaagccca cccacagcgc
      421 cgtgcgcgag ccgtagagca gccgcgacaa gacatcgcgg ccgaaggaat cggtgcccaa
      481 ccaatgggcc gctcccggag cttgaaacat cgcgccgtag tcgttatcga gcgggtcgta
      541 gggtgcaacc aagccggcga acagcgccgc caagatcatt aagagaacga cggccgcgcc
      601 ggccgcacca aggggccgct tgacggcaaa ggtacggatc gcggcaaggc aagtatcgaa
      661 ttgggcgcgc ataggttctg agtcaactat tggtaacgaa tgcgcggatc gagccaggca
      721 tagagcagat cgatcaagaa gttcatgaag ataaacgcga aggacaccaa cagcaccaac
      781 gcttgggtca tcgtatagtc gcgtcggctg atcgactcga caaacagcat gccgatgccg
      841 tttaggttaa acacttgctc ggtgacgacc aagccgccga tcagaaaggc aaactccaaa
      901 ccgatcacgg tgacgatcgg caacagagcg ttgcgcagcg catgcttcac caccacggcg
      961 cgctcccaca gccctttggc gcgcgctgtg cgcacgaagt cctcgcgcag gacttccaag
     1021 accgcggagc gcgtcatgcg cgtggccatg gcggaatatc ggtatcccac cgccaacgcg
     1081 ggccaaaaga gctgggtcaa atttgcccag ggatcggtga aaaatgacgt gaaggtcagc
     1141 ggcggcatcc attggaagac caggagaaaa ccgagaatca tgacaatgcc caaccagaat
     1201 gacggcatcg ccaagccgcc gatggcaaag acgcgcacaa ggtaatcgat ccaagtatcc
     1261 tgcttgagcg cggccaaggt accgaaagga atcgcaatga gcaccgccac tagcgtcgcc
     1321 atcagcgcca attgcaggct taactcaagg cgaattttaa tctcgtcggc gatcgcccgc
     1381 ccggtccaca tcgaagtgcc gaaatcgagc cggacaattc cccaagtcca gacagcaaac
     1441 tgctgccact gcggcttgtc caaacccaac tgcgcgcgtt ctcgctcgat cgccgcgcgc
     1501 ggcgcgaaag ttccgctacc ggcgtacttg agctcgacca cagcccccgg cgccacgcgc
     1561 aacataaaga aaaccaatac tgcgacaccg aagagggtcg ggatcattag taacaggcgt
     1621 ttgaggatat actggcccat tagaaaagat tcgaagatgg aggatcgagg attgaggatg
     1681 gcgggttggg aggggtgcta ttatccatcc tcttatcctc catcctcgac cattcttccg
     1741 tccgcgctac tgccccagcc agacatcgcg caaatcctga tttacataat ggctcggacc
     1801 gatcttccag cccttgagcc ggtcattgtg cggcacggtg cgttgccacc ataagaccgg
     1861 aaactgatag acttgctcgc cgagaaggcg cttctcgatc tgccgcaaca gcggtagccg
     1921 atctttgcta tcgagcatgc ggctctgcct ttcgaagagt tcatctacga ccgggtcttt
     1981 gtagcgcgca tagttgagcg ggctcttgtc gctgctcaga tacttgacca aatacaaatc
     2041 cggctcgtcc atgaactcac acataaaatc gataccgacg tcataattac cttggcgaaa
     2101 gtcgttgaag tagggcccgc cctcttgcgg cgtatgggtg acgttgagac cgatcttgcg
     2161 ccactggtcg acgacgaaca cgccggtgac ttcgtagggc tcgcgcacgt tgcggttctt
     2221 gagcacgaaa gagaaaccgt ccggcacgcc ggcctctttg agcaagcgct tggcttcagt
     2281 gcgggcggcg ttgatatcct tgccgaagcc cggcagtttg gcgacttccg ccgccggtgt
     2341 cgcgaattcc gaacccggac gatacaggcc gccgataaat ttcatcaccg agatctgcgc
     2401 cagcgccttg gaagcctcgt tgcggtcgat ggccaaattg agcgcccggc gcacccgcgc
     2461 atcgctgaac ggtttcttct cgttgttgaa cacgaccatc agattgcacg cccagggact
     2521 ctcttgtacc acggctttgc tacccagcga tttgaccacg tcgtcgcgcg ccgccgggtt
     2581 gaacccgctg aactcaacca tcacctgg
//
LOCUS       DATIRS010000863         1644 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_260632, whole genome shotgun sequence.
ACCESSION   DATIRS010000863 DATIRS010000000
VERSION     DATIRS010000863.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1644)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1644)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1644
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_260632"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1120)
                     /locus_tag="VLM90_10920"
     CDS             complement(<1..1120)
                     /locus_tag="VLM90_10920"
                     /inference="COORDINATES: protein motif:HMM:NF014750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016625 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, iron-sulfur
                     protein as acceptor [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde ferredoxin oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HSQ13527.1"
                     /translation="MSLFPTQRTTPLPGGYMGKVLRVNLTTGKLTDENLPEEPILNKF
                     IGGQALALYILMHELPLDATPFGAENKVVMMTGPLTGNGFTPGGTKMTAVYLSPLTNK
                     TLGRGATSGYWATYLKAAGYDGVIVEGVSAQPVYLYVKDGQAELRDAAKVWGLGTRDT
                     EDRLREIVGNRDARVLCIGPAGENMNRGAMLANDYNHFAAHSGGAVLGSKRLKAIVVS
                     GSLRPSHRDKTKLADAGLRWRNVLQQHDVKKKKTKYGHGDAWGALNNLNWRSTDIQPA
                     HIAGFADNDVLLRPCFQCARMCPWDAKLGEGEFKGTVVHFNAGGEWLDTFIKLGLKGN
                     SVLYLAEKINNLGIECSHFSCGAGVAFEAWEKGLLGPDR"
     gene            complement(1262..>1644)
                     /locus_tag="VLM90_10925"
     CDS             complement(1262..>1644)
                     /locus_tag="VLM90_10925"
                     /inference="COORDINATES: protein motif:HMM:NF024739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HSQ13528.1"
                     /translation="HNITAQLLAAGEYHVVTNTYAHIAARIKGQGGPVQYVLDEPVST
                     YVHPMVLTKGAPHPNAGKLLIGFILSIEGQRMLRDQGRIPAHRDVDPQVFSLRNVKLQ
                     ASDPRQATEYGPTGEEMRGIFGAR"
BASE COUNT          296 a          463 c          513 g          372 t
ORIGIN      
        1 tgcggtctgg accgagcagg cccttctccc acgcctcgaa cgctactccc gcgccgcagg
       61 aaaagtggct gcactcgatg ccgagattat tgatcttctc ggcgagatag agcacgctat
      121 tgcctttgag gccgagcttg ataaaggtat cgagccattc gccgccggcg ttaaagtgaa
      181 cgaccgtccc cttgaattcg ccctcgccca acttggcgtc ccagggacac atgcgggcgc
      241 attgaaagca gggacggagg aggacgtcat tgtcggcaaa gccggcgatg tgcgccggtt
      301 gaatgtcggt gctgcgccag ttcaaattat tcagcgcacc ccaggcgtcg ccgtggccgt
      361 acttggtttt ctttttcttg acgtcgtgtt gttgcaagac attgcgccag cgcaggccag
      421 catcggcgag cttggttttg tcgcgatggc tcggccgcag cgagccgctg acgacgatgg
      481 ctttgagtct tttcgaaccg agcacggcgc cgccgctatg ggcggcgaaa tggttgtagt
      541 cgttggcgag catggcgccg cggttcatgt tctcaccggc ggggccgatg cacaggactc
      601 tggcgtcgcg gttgccgact atctcgcgca ggcggtcttc agtgtcgcgg gtgccgaggc
      661 cccagacttt cgccgcgtcg cgcaattccg cctggccgtc tttgacgtaa agataaaccg
      721 gttgcgctga cacgccttcg acgatcacgc catcgtagcc ggcggctttg agataagtcg
      781 cccaatagcc gctggtggcg ccgcggccga gcgtcttgtt ggttaacgga ctcaagtaga
      841 ccgcggtcat cttcgtgccg cccggcgtga agccgttgcc ggtgagcggg ccggtcatca
      901 tgaccacttt gttttctgcg ccgaagggcg tggcgtcgag cggcaactcg tgcatcaaaa
      961 tatacagcgc cagtgcctgg ccgccgatga atttatttaa gatcggctct tcgggcagat
     1021 tctcgtccgt cagtttgccg gtggtcagat tgacacggag gaccttgccc atatagccgc
     1081 cggggagggg agtggtgcgc tgggttggaa atagactcat ctacgtattg cctcctgcga
     1141 tcatcacttc cccctttgaa aaaggggacc gaggggaatt tacttctgga cgattgaaaa
     1201 aatccccccg tgcccccctt tttcaaaggg gggattttcg aatcgttcga ttcgttggac
     1261 tctatctcgc gccgaagatc ccacgcatct cttctccggt tggaccatat tccgtcgcct
     1321 ggcgcggatc gctggcttgc agtttcacgt tgcgcaggga aaagacttgg ggatcgacgt
     1381 cgcgatgggc gggaattcgt ccctgatcgc gcagcatgcg ctggccttcg atggagagaa
     1441 taaaaccgat cagcagttta ccggcattag gatggggcgc gcccttggtc aagaccatcg
     1501 gatggacata ggtactgacc ggctcgtcca agacatattg caccgggccg ccttggcctt
     1561 tgatgcgcgc ggcgatgtgg gcgtaggtgt tggtgacgac gtgatattca ccggcggcca
     1621 atagttgcgc tgtgatgttg tgac
//
LOCUS       DATIRS010000864         2647 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1539583, whole genome shotgun sequence.
ACCESSION   DATIRS010000864 DATIRS010000000
VERSION     DATIRS010000864.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2647
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1539583"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(148..987)
                     /locus_tag="VLM90_10930"
     CDS             complement(148..987)
                     /locus_tag="VLM90_10930"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13529.1"
                     /translation="MFIIDSQVHIWAPETPDKPYAKENASPPHRAQPLGHDELLREMD
                     GAGVSRCILVPPTWEADRNDTSLEAARLHPERFRVMGKLALTNPNGPALMAAWKQQPF
                     MLGIRMVFNRGQSAQWLNDGTADWFWDAAEKYDIPVMTLAPADVPKLGEVAERHPGLR
                     LIVDHMGLNSVLRGKPLDPSVDTVIKLARHKNLAVKVSALPCYVNEAYPFPTLNPLVR
                     RVVDAFGPQRCFWGTDLSHLPCPYKQVVTLFTEEMKSLSSTELEWIMGRGLAEWLRWP
                     LPN"
     gene            complement(1091..2566)
                     /gene="hemG"
                     /locus_tag="VLM90_10935"
     CDS             complement(1091..2566)
                     /gene="hemG"
                     /locus_tag="VLM90_10935"
                     /EC_number="1.3.3.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR00562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004729 - oxygen-dependent
                     protoporphyrinogen oxidase activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase"
                     /protein_id="HSQ13530.1"
                     /translation="MQRIVVIGGGITGLAAAHRLTELAATHSLSIDVTVLEASGRLGG
                     SIATELIGEFLVEAGPDSFITEKPWALRLCERIGLTHRLVSTQSAYQKIFIVHNGQLV
                     ALPEGFFLLAPTRLWPFIQTPLFSWPGKLRMAGELLLPRGELSDDESLGAFVRRRFGN
                     EALERVAQPLVGGIYAADPDRLSLGATMPRFKEMERDRRSVIYAMWSAQRQRARKAET
                     GSGARWSLFVTLAGGMQELVDTLAERLPDGSVRLNCAAKQLKLGPNGKSWQVTAGDNH
                     VIAADAVVLAAPAFRAGDLLSPIDSNAAGELKSISYASTATVSLAYRREDFPHAPNSF
                     GFVVPAIERRKIMACTFSSLKYPGRAPEDKILLRAFVGGSLQPELFAASDGEMESSVR
                     GELASLLGITATPIFSRIWRHANSMPQYHVGHEARVKRIDGALQSFPTLTLAGSAYHG
                     VGISDCVRTGEEAAEKVLARISSNPSGALGVPANKPQQRSS"
BASE COUNT          526 a          739 c          853 g          529 t
ORIGIN      
        1 tccagtgaag aagaattcac cacagaggca cagagttcgc agagttcgga gtatttttaa
       61 atcataaact ggttactctg cgccctctgc tgcgtctccg cggtgcaatc tccgagccgt
      121 gcttcacagg aaagcctgaa aaccaattta attcggcagc ggccagcgta accattcggc
      181 cagaccgcgg cccatgatcc attccaactc ggtcgacgat agcgacttca tttcttcggt
      241 gaacaacgtc accacttgtt tatacggaca gggcaggtgg gacaaatcgg tgccccagaa
      301 gcagcgctgc ggaccgaaag catcgacgac gcggcgcacc agcgggttca gggttgggaa
      361 aggatacgcc tcgttgacgt aacatggcaa cgcggagact ttaaccgcga ggttcttgtg
      421 gcgcgcgagt ttgatcacgg tatcgaccga agggtcaagc ggtttgccgc gcagcactga
      481 gttcagcccc atgtgatcga cgatcaagcg cagccccgga tggcgttcgg cgacttcgcc
      541 gagcttgggc acatcggccg gtgccaatgt catcaccgga atgtcgtatt tctcagcggc
      601 atcccagaac cagtcggcgg tgccatcgtt caaccactgc gccgactggc cgcggttgaa
      661 aaccatgcgg atacccaaca tgaacggttg ttgtttccag gcggccatca acgccgggcc
      721 gttgggattg gtcaacgcga gtttgcccat gacgcggaag cgctcggggt ggagccgcgc
      781 cgcttccagc gaagtatcgt tgcggtcggc ttcccaggtg ggcggcacga gaatgcaacg
      841 cgatacaccg gcgccgtcca tctcgcgcaa cagttcgtcg tgaccgaggg gctgggcgcg
      901 atggggcggc gaggcgtttt ctttggcgta aggcttgtcc ggtgtctctg gcgcccagat
      961 atgaacttgt gagtcgatga taaacatcgg gggatatcct cgtttgaatt gcgtaattag
     1021 cgacgatacg gacgtgatag tccagtttct gctcatacgt caaggaggag ggcgggttta
     1081 aaacccgccc ctacgatgat cgttgctgtg gcttgtttgc cggtacgccc agcgcacccg
     1141 atggattcga agaaatgcgc gcgagaactt tttccgccgc ctcttcgccg gtgcggacgc
     1201 agtcggagat accaacgcca tggtaggcgc tgccggcgag ggtgagggta gggaacgatt
     1261 gcaatgcgcc gtcaattcgc ttcacccggg cttcgtggcc gacatggtat tgcggcatcg
     1321 aattggcgtg gcgccagatg cgcgaaaata tcggtgtggc ggtgatgccg agcaggctcg
     1381 ccagttcgcc tcggacgctg ctctccatct cgccgtcact tgcggcaaat agttcaggct
     1441 gcaagctgcc gccgacgaaa gcgcgcagga gaatcttatc ctcgggcgcg cggccgggat
     1501 atttcaggct gctgaatgtg caggccatga tcttgcgtct ctcgatggcc ggcacgacga
     1561 agccaaaact gttcggcgca tggggaaaat cttcgcggcg gtaggcgagg ctgacggtgg
     1621 cggtggaagc gtaggagatc gatttcaatt ccccggcggc attgctgtcg atggggctca
     1681 gcaaatcgcc ggcacgaaaa gcgggggcgg cgagaactac cgcgtcggcg gcgatgacat
     1741 gattatcgcc ggcggtaacc tgccagctct ttccgttggg gccaagcttc agttgtttag
     1801 ccgcgcagtt caatcgcacg ctgccgtcgg gcagacgctc ggcgagcgtg tcgacgagtt
     1861 cctgcatgcc gccggcgagg gtgacgaata gactccaacg cgcgccgctg ccggtttcag
     1921 ctttcctggc gcgctggcgc tgggccgacc acatggcgta gatgacgctg cggcgatcgc
     1981 gttccatttc tttgaagcgc ggcatggtgg cgccgaggct gagcctatcg ggatcggcgg
     2041 cgtagattcc gccgaccagc ggttgagcga cccgttccaa ggcttcgttg ccgaaacggc
     2101 ggcgcacgaa ggcgcctagg ctctcgtcgt cggacaattc gccgcgcggt aagagcagct
     2161 cgcccgccat gcgcagcttg cccggccagg agaacagcgg ggtttggata aacggccaga
     2221 ggcgcgtcgg cgcgagcaag aagaatcctt cgggaagcgc gaccagttgg ccgttgtgaa
     2281 cgataaatat tttctgatag gccgactgtg ttgaaaccag tcgatgggtt agaccgatcc
     2341 gctcgcataa cctgagcgcc caaggcttct cggtgatgaa cgaatcgggg ccggcttcga
     2401 cgagaaactc gccgatgagc tcggtagcga tggaaccgcc gaggcgtccg gatgcttcga
     2461 gcactgtaac gtcgatgctg agcgaatgcg tggcggcaag ttcagtgagg cggtgagcgg
     2521 cggctagtcc agtgatgcca ccgccgatga cgactattcg ttgcatcaac ataccggtcg
     2581 aggatggatg attgaggatc gaggattgcg accgtccatc ttctatcctc tatcctcgac
     2641 ggatttg
//
LOCUS       DATIRS010000865         1687 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_260730, whole genome shotgun sequence.
ACCESSION   DATIRS010000865 DATIRS010000000
VERSION     DATIRS010000865.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1687
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_260730"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..747
                     /locus_tag="VLM90_10940"
     CDS             <1..747
                     /locus_tag="VLM90_10940"
                     /inference="COORDINATES: protein motif:HMM:NF012506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate/2-methylcitrate synthase"
                     /protein_id="HSQ13531.1"
                     /translation="HSLGLPFSYPDNDLSYTGNFLNMLFKMTELKYQPHPVLERALDI
                     LFILHADHEQNCSTNAMRSVGSSQVDPYSAVAAAAAALYGPLHGGANEAVLRMLMEIG
                     SKGKVSEFIKKVKGGEGRLMGFGHRVYKNYDPRAKIIKEVADQVFEVTGRNPLLDIAL
                     ELERIALEDEYFIRRKLYPNVDFYSGLIYQSMGLPMDMFPVLFAIPRTSGWIAQWEEM
                     LLDPDQKLARPKQVYLGAGTREYVPMDKRK"
     gene            complement(754..>1687)
                     /locus_tag="VLM90_10945"
     CDS             complement(754..>1687)
                     /locus_tag="VLM90_10945"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HSQ13532.1"
                     /translation="RYFVRYYSTTAKGHFQQMLERSGKYMPMIAKVLKQEGLPEDLGY
                     LALLESEFIVNTTSPSGAVGLWQFVAGTAQRYGLRIDEWVDERRDPVKSTRAAAAYLK
                     DLHEHYGRWYLATAAYNAGPGTISKAMKSSGAKDFWSLSQKARISDETRNFVPKFVAI
                     ALIAKEPEKYGVNPIEYAAPLDYEEVELPWSMKLDTLAEMAESDAAAVRELNPSLLRN
                     TTPPGEGGFRVNLPVGKSAVYLAKADEKFKEKEAEAVQMVTHEVRKGETLLAIARHYG
                     QEIRALMRFNGLTTARLRVGQKLIILMEGIRALR"
BASE COUNT          329 a          498 c          472 g          388 t
ORIGIN      
        1 catagccttg gcttgccctt ttcatatccc gataacgatt tgagctacac cggcaacttc
       61 ctcaacatgc tcttcaagat gaccgagcta aaatatcaac cccaccccgt gctggagcgc
      121 gccctcgata ttctgtttat cttgcacgcg gaccacgagc agaactgcag caccaacgcc
      181 atgcgcagcg tgggcagctc gcaggtcgat ccttattccg cggtcgccgc cgccgccgcc
      241 gcgctttatg gtccgctcca cggcggcgcc aacgaagcgg ttctgcgcat gctgatggag
      301 atcggctcca agggcaaagt ttccgagttt attaagaagg tcaaaggcgg cgagggacgc
      361 ttgatgggtt tcggccatcg ggtttacaaa aactatgatc cgcgcgccaa gatcatcaaa
      421 gaggtcgccg atcaggtttt tgaagtcacg gggcgcaatc cgttgctgga catcgcgttg
      481 gagctggaac ggatcgcctt ggaagatgag tacttcatcc ggcgcaagct ctatccgaac
      541 gtcgatttct attcgggctt gatctaccag tcgatgggac tgccgatgga tatgttcccc
      601 gtgctgttcg cgattccgcg cacatctgga tggatcgccc agtgggaaga aatgctgctc
      661 gatcccgatc aaaagctggc gcggccgaag caggtctatc tgggcgcggg aacacgcgaa
      721 tacgtgccga tggataagcg gaagtaacgc ctattatctc aacgcgcgga ttccctccat
      781 cagtattatg agtttctgcc cgacgcgcag gcgcgcagtg gtcaagccgt tgaacctcat
      841 cagcgcgcga atttcttggc cgtaatgcct ggcgattgcg aggagtgttt cgcccttgcg
      901 cacttcgtgg gttaccatct gaaccgcttc cgcttctttc tccttgaatt tctcgtcagc
      961 tttggcgagg taaacggcgc ttttgccgac gggtagattg acgcgaaaac cgccttctcc
     1021 cggcggcgtc gtattgcgca agagggaggg gttgagctcg cgcaccgccg ccgcgtccga
     1081 ctccgccatt tccgccaatg tatccagctt catagaccac gggagttcga cttcctcgta
     1141 gtccagcggc gcggcgtact cgatggggtt gacgccgtat ttctcgggct ccttggcgat
     1201 cagagctatg gcgacgaatt tcggcacgaa attgcgcgtc tcgtcactaa tccgggcctt
     1261 ttgactcagg ctccagaaat ccttggcgcc gctcgacttc atcgctttac tgattgttcc
     1321 aggtcctgcg ttgtaggcgg cggtcgctaa ataccatcgc ccgtagtgtt cgtgcaggtc
     1381 tttcaagtag gcggccgcgg cgcgtgtcga cttcaccggg tcccgccgct cgtcgaccca
     1441 ctcgtcgatc cgcagtccgt acctctgcgc cgtaccggcg acaaactgcc acagaccgac
     1501 agcgccggac ggcgaagtcg tgttgacgat gaactcgctt tcgagcaaag cgagataacc
     1561 gagatcttcc ggcagtcctt cctgcttcaa aaccttggcg atcatcggca tgtattttcc
     1621 cgagcgttcg agcatctgct ggaaatgtcc cttggccgtg gtcgaataat atctgacgaa
     1681 atagcgg
//
LOCUS       DATIRS010000866         1757 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1146692, whole genome shotgun sequence.
ACCESSION   DATIRS010000866 DATIRS010000000
VERSION     DATIRS010000866.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1757)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1757)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1757
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1146692"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..736)
                     /locus_tag="VLM90_10950"
     CDS             complement(<1..736)
                     /locus_tag="VLM90_10950"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13533.1"
                     /translation="MNVSKVRRMLFGLISFSVTFAGLARDVWSAEATRFLVSYGGTAG
                     YQLPLWVNKELGFSRKHGVDLEIILIQAGSPNIQALLGGSLQLTQTAASSAVIGATQG
                     APVVIVATLENKLPMLLVSRPEIKEPQQLRGKVIGINRFGGSNDAAVLMAVKAWKMQP
                     SDIKMLQTGGTAARMAALMTKKVDATVQSYPEIYQARKLGMNVLADIGDFGYFTNTSN
                     IVTRAYLQQNRAAIKGFIKGQIEGMHY"
     gene            complement(761..1714)
                     /locus_tag="VLM90_10955"
     CDS             complement(761..1714)
                     /locus_tag="VLM90_10955"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13534.1"
                     /translation="MSQSSIGNWRMDVHHHVVPPEFADDSMPIKLPDTEAQLRSMESW
                     QIRAAITSLTPRVLLKNLHRLRAVARACNEFQAQRVRDNQARFGAFALLPLPDVDAAL
                     EEIAYALDVLRLDGIGLFSSVTDRYLGDPLFDRVFDELNRRNAVVFIHPTHCEAPEHT
                     CLQAPPFVVEYVFDTTRAIVNLIYTGTLKRCPDIRLIVAHGGGTVPFLAQRIAMMEGH
                     RGAKGVTDVIPTLRSLYYEIASTTSGFALRSLQELADPGHILWGSDLPFVYGTRLQEE
                     IDHWQHYDGFDAAGRAAVEQFNALRLFPRLAPEPSGPGARP"
BASE COUNT          361 a          513 c          526 g          357 t
ORIGIN      
        1 cgtagtgcat gccctcgatc tgccctttga tgaatccctt gatggcggcg cgattctgct
       61 gaagataagc acgtgtgaca atgttcgaag tgttcgtgaa ataaccgaag tcgccgatgt
      121 cggccaaaac gttcatgccg agcttgcgcg cctggtagat ttccggatag gactgcaccg
      181 tcgcatcgac cttcttggtc atcagcgccg ccatgcgcgc cgctgttccg ccggtttgga
      241 gcattttgat atcgctcggc tgcattttcc acgccttcac cgccatcaag acggcggcat
      301 cgttggaacc gccgaagcga ttgataccga tgaccttacc gcgcaactgc tgcggctctt
      361 tgatctcagg gcgggagacg agcagcatgg gcagcttatt ttccaaggtc gccacgatca
      421 ccaccggcgc gccctgggta gcgccgatca ccgccgaaga ggccgccgtt tgggttaact
      481 gcaggctgcc gccgagcaaa gcctggatgt tcggcgagcc cgcttgtatc aagataatct
      541 ccagatcgac gccatgcttt ctgctaaagc ccaattcctt attgacccat aagggaagtt
      601 ggtaaccggc ggtgccgccg tagctgacaa gaaagcgggt tgcttcggcg ctccatacgt
      661 cgcgcgctaa acccgcgaac gtcacggaaa agctaatcag accgaagagc atccgcctta
      721 ctttactcac gttcataatt tttcctcctc gcagaatcct ttatgggcga gcgcccggcc
      781 cgctcggctc cggtgccaag cgcgggaaaa gtctgagcgc attgaactgc tcgaccgcag
      841 cccggccggc agcgtcgaag ccgtcataat gttgccaatg atcgatttct tcctggagcc
      901 tagtaccgta aacgaacggc aagtccgaac cccacaggat atgccccgga tcggcaagct
      961 cttgcaacga acggagggcg aatcccgaag tcgtgctggc gatctcgtag tagagcgagc
     1021 gcagcgttgg gatcacgtcg gtgacgcctt tggcgccgcg atgaccttcc atcatggcga
     1081 ttctttgagc gagaaagggc acggtgccgc cgccgtgagc gacgattaga cgaatatcgg
     1141 gacagcgctt gagagtaccg gtgtatatga gattaacgat agcgcgggtg gtgtcgaaga
     1201 cgtactcgac gacgaaaggc ggcgcctgca aacacgtgtg ctcgggcgct tcgcagtggg
     1261 tcgggtggat gaatacgacc gcgttgcgcc ggttaagctc atcgaacacc cgatcgaaca
     1321 gcggatcgcc cagatagcgg tcggtcacgc tggaaaaaag cccgatgccg tcgaggcgca
     1381 aaacgtctag ggcgtaagcg atctcttcca gcgcggcgtc aacgtctggg agcggcagca
     1441 aagcgaaagc gccgaatcgc gcctggttgt cccgcactct ttgcgcttga aattcgttgc
     1501 aggctcgcgc cactgcgcgc aggcggtgaa gatttttcaa aagcacgcgc ggcgtgagcg
     1561 aggtgatcgc cgcgcgaatc tgccagcttt ccatcgagcg gagctgcgct tcggtgtccg
     1621 gcagcttgat cggcatggaa tcgtcggcaa actccggcgg caccacgtgg tggtgcacgt
     1681 ccatgcgcca attaccgatg ctcgattgac tcattgggct ccgccgattt tggccgtcag
     1741 cgccgatagg gttctgc
//
LOCUS       DATIRS010000867         1888 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_851465, whole genome shotgun sequence.
ACCESSION   DATIRS010000867 DATIRS010000000
VERSION     DATIRS010000867.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1888)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1888)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1888
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_851465"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            174..1337
                     /locus_tag="VLM90_10960"
     CDS             174..1337
                     /locus_tag="VLM90_10960"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSQ13535.1"
                     /translation="MSQFAVKTMASANIEMVPSIEAIVNDLAPRFAARAAAVDESDRF
                     VAENFSELKGRGLFAAGVPAELGGMGASHGELCEMLRLLARSCGSTALAFSMHTHQVA
                     TNAWRWRHQKAPVEGLLKRVASENILLLSSGGSDWLNGSGSATRVDGGFRINARKIFS
                     SGAPAGDLLMTSAVYDDPDTWPTVLHFAVPMKAEGVKRLDTWKVMGMRGTGSHDVELN
                     SVFVADAAIGGKRPAGKWHPLFHIISMIAFPLIYSAYIGVAEAARDLVVERGRKGKPD
                     RHTVELIGAIDNELTITRLVRQDMIEAAATDDPGLATTNRVMTGRTLVARGVLNTVEL
                     AMEAAGGSAFYRSAGLERLFRDAQAARFHPLREGAQKTFAGRMALGLDVDAAN"
BASE COUNT          409 a          511 c          581 g          387 t
ORIGIN      
        1 ttttaacggc accggcttac gggcatcgag aatcacccgg agaaggactt ctacagcgca
       61 gaccgcgcgc gtgatccacg ggcattcgag atcgacgagc cggcgctgct gtgcggtggt
      121 agcgctagga aaaattcgca tcggatcgac aaaactaaaa ggagaaatgg aacatgtcac
      181 aattcgcggt aaaaactatg gccagtgcga atatcgagat ggtgccgtcg atcgaagcga
      241 tcgtcaacga cctagcgccg cgtttcgcgg cgcgcgcggc ggcggtggat gaatcggatc
      301 gcttcgttgc cgagaacttt tccgagttaa agggacgcgg gctgttcgcc gccggcgtgc
      361 cggcggaact aggcggtatg ggcgcgagtc atggcgagct gtgcgagatg ctgcgattat
      421 tagcgcgctc atgcggctcg acggcgctgg cgttttccat gcacacccat caagtcgcga
      481 ccaacgcctg gcgctggcgc catcagaaag cgccagtaga gggtttactc aagcgcgtcg
      541 ccagcgaaaa tattctgctc ttgagcagcg gcggctcgga ttggctcaac ggttccggca
      601 gcgcgacgcg ggtcgacggc ggtttccgaa tcaatgcgcg caagattttt tccagcggcg
      661 cgccggctgg tgatctattg atgaccagcg cggtgtacga tgatcccgat acctggccaa
      721 ctgtgctcca cttcgcggtg ccgatgaaag ccgagggtgt gaaacggctc gatacctgga
      781 aagtcatggg catgcgcggc accggttccc atgacgttga gttgaatagt gttttcgtcg
      841 ctgacgcggc tatcggcggc aagcggccgg cgggcaagtg gcacccgttg tttcatatta
      901 tttcgatgat cgctttcccg ttgatttatt cggcatatat cggcgtcgcc gaggcggcgc
      961 gggatctggt cgtcgaacgg ggccggaaag gcaagccaga tcgccatacc gttgaactga
     1021 tcggcgccat cgacaacgaa ctgaccatca ctcggttggt gcgccaggac atgatcgaag
     1081 cggcggcgac tgacgaccca gggttggcga ccaccaatcg agtcatgacc ggtcgcacgt
     1141 tggtagctcg cggcgtgttg aataccgtcg agttagcgat ggaagccgcc ggcggcagcg
     1201 cgttctaccg atcggcgggt ttggagcggt tgttccgcga cgcgcaagcg gcgcgctttc
     1261 acccgctgcg cgaaggcgcg caaaaaactt tcgctggacg gatggctttg ggattggacg
     1321 tcgacgcggc caattaaccg gcgcgtcaag ccaccagagt gctgcgcgcc gcggagaaat
     1381 gccgccaggc ggcactcctc gatcgcgcgc cgagatcgaa gcgatggcga ttgcatgctg
     1441 ttacctccaa ccagggacaa ctaataaagg agaaaaccca gatttctaca accgatcgga
     1501 tcaagcgcgg tctggcaaaa actctgcgcg cggcggttct ggccgccgcg cttaccggcc
     1561 gcctttagtc tttcctctac cggaaagttc gactatgctt gggcaagttt tggcgatgtt
     1621 ctgaagaatg gtaaattcgt taacgcgaag aatatagcga gtgataaacc gattagtatc
     1681 gcaacaaaaa ttgactgcac atctgacgac gaaacgggaa tatgcctttg tcatctagcg
     1741 attcttgacc catatttgat tgccccacct aatacttata ttactgtgcg gcaagaaacc
     1801 cggacgccgc cttgcacacc gtgcttgttg atccggaagg agaggtggaa tgaaaactcc
     1861 tggaatacgc atgtttgtcc tgctcatt
//
LOCUS       DATIRS010000868         2005 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_654617, whole genome shotgun sequence.
ACCESSION   DATIRS010000868 DATIRS010000000
VERSION     DATIRS010000868.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2005)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2005)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2005
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_654617"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..787
                     /locus_tag="VLM90_10965"
     CDS             <1..787
                     /locus_tag="VLM90_10965"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13536.1"
                     /translation="AALLGGDTEMTVTGGIGNVAAYVKGSTDIVFTGGVKNVMTQTLV
                     AGGNIKRPEDLKGKRIGVSRIGGNSHYFTIQALRRHGMEPNRDYSFLQTGGDPETLAA
                     LMSGSLEVANLTPPTDAQAIARGYHYVIYGPDLKIPYSATAFVTKRSVMAKRPVVVAN
                     FMRAMAEASKIVHTDREFYYKVLGKYLRIQDRSVLDSAYNAEIKALEPRLTIKLESLQ
                     AILDELTPTDARAKNIKPQEMVDNRYLDEMNKSGFMDQLWSKK"
     gene            772..1776
                     /locus_tag="VLM90_10970"
     CDS             772..1776
                     /locus_tag="VLM90_10970"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13537.1"
                     /translation="MEQEVMRRVLLSLTLGFVLFMPANSRAAEKFTTIYSARVMAQAL
                     PWIAEDAGLFKKYNLDHNLVFIASSSIVTAALLGGDPDMTMTGGVGNVIAFVRGSTEI
                     AYVGSAKNLMTQNIIAGGNLKRPEDLKGKRIAVSRIGSNSHYFTIQALRRHGMEANRD
                     YTFLQSGGDPESLIALLSGGVEVACLTPPTDVQALSRGYHYVIYGPDLKIPYSATSFV
                     TKRSTIARRPQALAQYMRAMAEASKIMHSDREVVYRVLGKQLRINDRTIMESAYNAEI
                     KAMEPRLALKAEAFQAILDEVAQTDERAKKVKPLELTDPRFLNDMEKSGFWDQIWAKR
                     "
     gene            1792..>2005
                     /locus_tag="VLM90_10975"
     CDS             1792..>2005
                     /locus_tag="VLM90_10975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13538.1"
                     /translation="MEQSIVSSDSHVIEVPDLWEKGLPAAMRERAPKMFFDEKRDAWM
                     FGSPEVQIQAVGGLFMAGQQPENLEKF"
BASE COUNT          459 a          563 c          582 g          401 t
ORIGIN      
        1 cgcggcattg ctcggcggcg ataccgagat gaccgtcacc ggcggcatcg gcaacgtcgc
       61 tgcctatgtc aaaggatcga cggatatagt tttcaccggc ggcgttaaaa acgtcatgac
      121 acagaccctg gttgccggag ggaatatcaa aaggcccgag gatctgaagg gaaagcggat
      181 tggcgtcagc cgcatcggcg gcaactcgca ttattttacg attcaggcgc tgcggcgtca
      241 cggcatggag cctaaccgcg actatagttt tctgcagacc ggcggcgatc ccgaaaccct
      301 cgccgccttg atgagcggct ccttggaagt ggctaacttg acaccgccca ccgatgccca
      361 agctatcgcc aggggttatc attatgtgat ttacggtccc gatctgaaga ttccttactc
      421 ggcgacggcg tttgtcacca agcgctcggt gatggccaaa cggccggtgg tggttgccaa
      481 cttcatgcgc gccatggcgg aggcttccaa gatcgtccac accgaccgcg aattttatta
      541 caaggtgctg ggcaagtatc tgcgcatcca ggaccgcagc gtgctcgact cggcttacaa
      601 tgccgagatc aaagcgttgg aaccgcgttt gacgatcaag cttgaatcct tgcaggcgat
      661 cctcgacgag ctgacgccca ccgacgcgcg ggcgaagaat atcaagccgc aagaaatggt
      721 cgataaccgc tatctcgacg agatgaacaa gagcgggttc atggatcagt tgtggagcaa
      781 gaagtgatgc ggcgtgtgct gttgagctta actctcggat tcgtgttgtt catgccggcg
      841 aactctcgcg ccgcggagaa attcaccacc atctactcag cccgggtgat ggcgcaggcg
      901 ctgccttgga tcgccgaaga tgccggctta ttcaagaaat acaatcttga ccataacctg
      961 gtttttatcg cctcgtcgag catcgtcact gccgcgctgc tcggcggcga tcccgacatg
     1021 accatgaccg gcggcgtcgg taacgtcatc gctttcgtcc gcggctcgac cgagatcgcc
     1081 tacgtcggca gcgccaagaa tctcatgacg cagaacatca tcgccggcgg caacttgaaa
     1141 cggcccgaag atttgaaagg caaacgcatc gcggtcagcc gcatcggcag caactcgcac
     1201 tactttacga ttcaggcgtt gcggcgccac ggcatggagg ccaaccgcga ttacactttc
     1261 ttgcaatccg gcggcgaccc cgaatcgctg atcgcgctgt tgagcggcgg cgtcgaggtg
     1321 gcatgcttga ccccgccgac ggacgtccaa gcgttgtcgc gcggctacca ctacgttatc
     1381 tatggacccg atctcaaaat cccctattcc gcgacgtcct ttgtcaccaa acgttcgacg
     1441 attgccagga gaccgcaagc cctggcgcaa tatatgcgcg ccatggccga ggcttcgaag
     1501 atcatgcaca gcgaccgcga agtcgtttat agagtgctcg gcaaacagct gcgcatcaac
     1561 gaccggacga tcatggaatc tgcttacaat gccgagatca aagcgatgga gccgcggctg
     1621 gcactcaagg ccgaggcatt tcaagcgatt ctcgatgaag tggcgcagac cgatgagcgg
     1681 gccaagaagg taaaaccgct ggaattgacc gatccgcgat ttttaaatga tatggaaaag
     1741 agtggctttt gggatcaaat ctgggctaaa agataggaaa aaggaggagc tatggaacaa
     1801 tcaattgtct cgtcggattc tcacgtgatc gaagtgccgg atctttggga aaagggcttg
     1861 cccgccgcca tgcgcgaacg tgcgccgaag atgttcttcg acgaaaagcg cgacgcctgg
     1921 atgttcggtt cgcccgaggt gcagattcaa gccgtcggcg gattgttcat ggccggccag
     1981 cagccggaaa atctggagaa gttcc
//
LOCUS       DATIRS010000869         2617 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1931617, whole genome shotgun sequence.
ACCESSION   DATIRS010000869 DATIRS010000000
VERSION     DATIRS010000869.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2617
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1931617"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..459
                     /locus_tag="VLM90_10980"
     CDS             <1..459
                     /locus_tag="VLM90_10980"
                     /inference="COORDINATES: protein motif:HMM:NF014799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HSQ13539.1"
                     /translation="HTRLLDIRGDVPENDKPIPFGVADVKRSGRDVTLIATSYTVQVA
                     LQAAAKLAKEDIEIEVVDPRTLVPFDLATILSSVEKTHRVVIADETHQSCGVAAEIAA
                     RIAETGFDKLKTAIRRVSTLDVPVPYSPGLEAHIGPSEARIMDAVRAAVA"
     gene            528..1505
                     /locus_tag="VLM90_10985"
     CDS             528..1505
                     /locus_tag="VLM90_10985"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HSQ13540.1"
                     /translation="MAIKQENSKEMIGLLRRMWLIRAFEEKVSALYAERQIVGLLHLG
                     IGQEAVAVGALSLLRDDDLVYGGHRSHGHAIAKGADINKLMAEIAGRATGYCGGKGGS
                     MHIVAKECGFITATGVVGGTIPLALGAAFAAKERKKGQLAVVFFGDGAGQSGPFHESL
                     NIASLWQLPVIFVCENNGYAEFTPLSAHTKIERLAQHAKTYGITADTVDGNDLFAVRE
                     VMSKAVDKCRAGNGPIFVECLTHRMRGHYEGDPAKYRELSQLAEWQKKDPIARVARAL
                     KSQKALTDKELAAMASEAQALADKAATFSLSSPWPAEIEVDSQVYAAAS"
     gene            1543..2538
                     /locus_tag="VLM90_10990"
     CDS             1543..2538
                     /locus_tag="VLM90_10990"
                     /EC_number="1.2.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF006667.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HSQ13541.1"
                     /translation="MQPQPTMPEHTYLEAIRAGLEEEMRRDPAVYVFGEDVALGGPFG
                     VTKGLAETFGVNRTVNTPISEATVMGLAIGTATAGLRPVIEIMFIDFITLAMDQLVNH
                     AAKLHYMSGGQLKIPLTVRVQCGISGAMGAHHSQSLESWLAHVPGLKVVMPANPADAK
                     GLLKSAIRDDNPVVFIEHRGLYWTKGEVPANEQCVAIGKAALLREGTDLTIVALSSMV
                     APALAAAKELAAEGISVEVIDPRTISPLDIETIANSAKKTSRMIVTHEAVEHGGIGAE
                     IVSRVQQEAFYYLDSPIVRVAAPFAPVPAGPTLEKQFLPNQERILAACRRAVSPS"
BASE COUNT          567 a          834 c          742 g          474 t
ORIGIN      
        1 cacacccggc tcttggacat ccgcggcgac gtcccagaga acgacaaacc aattccgttc
       61 ggcgtcgccg acgtcaaacg cagcggccgt gatgtgacgt tgatcgcgac ttcctacacc
      121 gtccaggtcg cgctccaagc cgccgcgaaa ctcgccaagg aagacatcga aattgaagtc
      181 gtcgacccgc gcaccttggt acccttcgat ctcgcgacca ttctctcatc ggttgagaag
      241 actcatcgcg tcgtcatcgc cgacgagacc catcaaagct gcggcgtcgc cgccgagatc
      301 gccgcgcgca tcgccgagac cggcttcgac aagctcaaga ccgccatccg ccgggtctcg
      361 accctcgatg tgccggtgcc ctacagccca gggctcgaag cccatatcgg cccatccgag
      421 gcgcgcatca tggacgctgt acgcgcggcg gtagcgtaaa aactgtttca cgttcttgaa
      481 atctgcgatg acctgccgaa aagcagtcat acggctcgct tggattcatg gctattaagc
      541 aagaaaactc caaggaaatg atcggtctgc tgcgccgcat gtggctcatc agagcgttcg
      601 aagaaaaagt ctcggcgctc tacgccgagc gccaaatcgt cggcttgctc catttgggca
      661 ttggccaaga agcggtcgcc gtcggcgcgc tgagcttatt gcgcgatgac gatttggtct
      721 atggcggcca ccgctcccat ggccacgcca tcgccaaggg cgcggacata aataaattga
      781 tggccgagat cgccggccgc gccaccggtt actgcggcgg caagggcggc tccatgcata
      841 tcgtcgccaa agagtgcggc tttatcaccg ccaccggcgt ggtcggcggc accattccgc
      901 tcgccctcgg cgcagccttt gcggcgaaag aaagaaaaaa aggccaactc gcggtcgtct
      961 tcttcggcga cggcgccggc caatccgggc cgtttcacga gtcgctcaac atcgccagcc
     1021 tctggcaact gccggtgatc tttgtctgcg aaaacaacgg ctacgccgag ttcacgccgc
     1081 tgtcggcgca caccaagatc gagcggctgg cgcagcatgc caagacttat ggaattactg
     1141 ccgacaccgt cgacggcaac gatctgtttg ccgtgcgcga ggtaatgtcg aaagccgtcg
     1201 acaaatgccg tgccggcaac ggcccgatat ttgttgaatg tctgacccat cgcatgcgcg
     1261 gccattatga aggcgatccg gccaagtacc gcgagttgtc ccagctcgcc gaatggcaga
     1321 agaaagatcc catagcccgg gtcgccagag cgctgaagag ccagaaagcg ctcaccgaca
     1381 aagaactggc ggcgatggca agcgaagccc aagccttggc cgacaaagcc gcgacattct
     1441 ctctgtcatc gccgtggcca gcagaaatcg aagtcgatag ccaagtatac gcagcggcat
     1501 cataaggtcc taatgtaggg gcgcagcatg ctgcgcccgc cgatgcaacc acaaccaacc
     1561 atgcccgaac acacctatct cgaagcgatc cgcgccggcc tcgaagaaga gatgcgccgc
     1621 gatccggcgg tttacgtttt cggcgaagat gttgccctcg gcggtccctt cggcgtcacc
     1681 aaaggtttgg ccgaaacctt cggcgtcaac cgcaccgtca acacgccgat cagcgaagcc
     1741 accgtgatgg ggcttgccat cggcaccgct accgccggcc tgcgccccgt aatcgagatc
     1801 atgttcatcg attttatcac cctggcgatg gatcaattgg tcaatcacgc cgccaagctg
     1861 cactacatgt cgggcgggca attgaaaatt ccactgacgg tgcgcgtcca gtgcggcatc
     1921 agcggcgcca tgggcgccca tcattcgcaa agtctggagt cctggctcgc ccatgtgccg
     1981 ggactgaaag tcgttatgcc ggccaatccc gccgatgcca aaggtttgtt aaaatcggcg
     2041 atccgcgacg ataatccggt ggtgttcatc gaacatcgcg gtctttattg gaccaagggc
     2101 gaagtgccgg cgaacgaaca gtgcgtcgcc atcggtaaag ccgcgctgct gcgcgaaggg
     2161 acagatctca ccatcgtcgc gctgtccagc atggtagcgc cggcgctggc cgcagcgaaa
     2221 gaattagcag cagaagggat ctcggtggaa gtcatcgacc cacggacgat ttcgccgctc
     2281 gatatcgaga ccatcgccaa ctcggcgaag aaaaccagcc gcatgatcgt cacccatgaa
     2341 gcggtcgaac atggcggcat cggcgcggaa atcgtcagcc gggtgcagca ggaagctttt
     2401 tactatctcg atagcccgat cgtccgtgtc gccgccccgt ttgcaccggt cccggccgga
     2461 ccgacgctgg aaaaacagtt tttgccgaac caagagcgca tcctcgctgc gtgccgccgc
     2521 gcggtatcgc caagctaacc ttgcgttgcc agctcaacga ggaagccatg ccgcgccact
     2581 ttttggcaaa tcttctagta ctcgcttcga cgctttt
//
LOCUS       DATIRS010000870         2507 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1834761, whole genome shotgun sequence.
ACCESSION   DATIRS010000870 DATIRS010000000
VERSION     DATIRS010000870.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2507
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1834761"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..641)
                     /locus_tag="VLM90_10995"
     CDS             complement(<1..641)
                     /locus_tag="VLM90_10995"
                     /inference="COORDINATES: protein motif:HMM:NF012497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13542.1"
                     /translation="MPGDKSIAHRAVIFGSIAEGRTRIFNLSGGEDNSRTVRAFRQLG
                     VEIGKDGDALCIEGQGFAGLRQPSAAIDCGNSGTTIRLMSGLLSGLPFHSELDGDASI
                     RQRPMQRVIDPLMQMGARIRSKAGNGLAPLEIDGGGLHGMSYRMPIASAQVKSAILLA
                     ALQADGETRIEEPQRSRDHSEVMIRGFGGEVNVDGVHIGIKGGQSLRGQDVRIP"
     gene            complement(703..1566)
                     /locus_tag="VLM90_11000"
     CDS             complement(703..1566)
                     /locus_tag="VLM90_11000"
                     /inference="COORDINATES: protein motif:HMM:NF014234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004665 - prephenate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0008977 - prephenate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006571 - tyrosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase/arogenate dehydrogenase
                     family protein"
                     /protein_id="HSQ13543.1"
                     /translation="MAVKFEKLVLAGVGLICGSLALDMRRRKLVKEIIGYGRSESNLK
                     IAKKKGLIDSYFVRPADFPAGVDFLMIGTPVETIVPLTQTFLPRLEKGCIVSDVGSVK
                     GEIVRGMEKILPKHISFVAGHPIAGSEQWGAEAARENLFVRHRCVLTPTKKTDKKALK
                     KIAELWRQVGADVEIMHPDTHDRVLGVISHLPHVLVYALVNALNRTNLKGVDLKTYCA
                     GGFKDFTRIASSRPELWRDICLMNRKALGRSLTDYINYLEQLNRWIRDQKGGLLEKEF
                     ARAYDTRAQIP"
     gene            complement(1587..>2507)
                     /gene="hisC"
                     /locus_tag="VLM90_11005"
     CDS             complement(1587..>2507)
                     /gene="hisC"
                     /locus_tag="VLM90_11005"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HSQ13544.1"
                     /translation="DQLHLYPDGDCFYLKNGLAKKLGVAPDELIFGNGSNEIIELAVR
                     AFMRPGDQAVMARQAFVVYQLIVQAVGGKSVQVALRDFTHDLSAIAAAVTAATKIVFL
                     ANPNNPTGTIYRRAEWEAFLAQLPKDLLLIVDEAYFEYVQDAGYPDSLKYHREDRPML
                     TLRTFSKLYGLAGLRVGYGVGPRQIISMMQRVRQPFNVNAPAQWAALAALEDGDHVRR
                     SLALNQEGLEFLGAEFNRLGLQFVPSHGNFILVRVGKGQEVYKQLLALGVIVRPMGGY
                     QFPEHIRVTVGTMDENRKFIVALAKVIKSF"
BASE COUNT          518 a          770 c          690 g          529 t
ORIGIN      
        1 ggaatgcgca catcctggcc acgcagggat tgcccacctt tgatgccgat atgaacgccg
       61 tcaacgttaa cctcgccgcc gaaaccgcga atcatcactt cactgtgatc gcgcgagcgc
      121 tgcggctctt cgattctggt ctcgccgtcg gcctgcaatg ccgccaacag tatcgccgac
      181 ttcacctgag cgctggcgat gggcatgcga taagacatgc cgtgcaggcc gccgccatcg
      241 atttccaacg gcgctaagcc gttgccggct ttgctgcgaa tccgcgcgcc catttgcatc
      301 aacggatcga tcacccgctg catgggccgc tggcggatcg acgcatcgcc atcgagttca
      361 ctgtgaaatg gcaagccgga aagcaggccg gacatcaacc ggatcgtcgt gccggagtta
      421 ccgcagtcga tcgccgcgct tggctggcgc agcccagcga agccctggcc ttcgatgcat
      481 agcgcatcgc catccttgcc gatctccaca cccaactggc ggaatgcccg tacggtgcgc
      541 gaattgtcct cacccccgga taaattaaag atccgcgtgc gtccctcggc gatactgcca
      601 aagatcaccg cgcggtgggc gatggattta tcgcctggca cggtaatggc tccatgcaga
      661 ggtctgtcga tcggttcgat gcgtcgcttc atggtttcgt cgttagggaa tttgtgcgcg
      721 ggtatcgtag gcgcgggcaa actccttctc cagcaagccg cctttttgat cacgaatcca
      781 acggttcagt tgttcgaggt aattgatgta atcggttaac gatcgtccaa gcgcctttcg
      841 gttcatcaaa cagatatccc gccatagttc cggccggctc gacgcgatgc gggtgaaatc
      901 cttgaaacca ccggcgcagt aggttttaag atcgacgcct tttaaatttg tccggttgag
      961 cgcgttcacc agggcgtaga ctaacacatg gggcagatgg ctgatcacgc ccaacacccg
     1021 gtcgtgagta tcgggatgca tgatttcaac atcggcgccc acctggcgcc acagctcggc
     1081 gatttttttc aaggcttttt tatcggtctt cttggtcggc gtcagcacgc agcgatggcg
     1141 cacaaacaga ttctcccgcg ccgcctcggc accccactgc tcgctgccgg cgatcggatg
     1201 gccggcgaca aacgatatat gcttcggcag gatcttctcc atgccgcgga cgatctcgcc
     1261 tttgacgctg ccgacatcgc tgacgataca gcccttctcc agcctgggca gaaacgtttg
     1321 ggtcagtggc acgatagtct ccaccggtgt gccgatcatg agaaaatcga cgccggccgg
     1381 gaaatcggct gggcggacaa aataactgtc gataagcccc ttcttcttgg cgattttcaa
     1441 gttgctttcg ctgcggccgt aaccgattat ttccttgact aatttgcgcc ggcgcatgtc
     1501 gagggccaaa gagccacaga tcagcccaac ccctgccaac accaattttt cgaactttac
     1561 ggccacgatc ttgatcactc ccgctgctaa aaactcttga tgactttggc caatgccacg
     1621 ataaattttc gattctcatc catggtgccg acggtcacgc ggatatgttc gggaaactgg
     1681 taaccgccca tgggtcggac gatcacgcct agggcgagca actgcttata cacttcctgg
     1741 cctttaccga cacgcaccaa gatgaaattg ccatggctcg gcacaaactg cagaccgagc
     1801 cggttaaatt ccgcgccgag gaactccagc ccctcctggt tcagcgccag gctgcgccgc
     1861 acatgatcgc catcttccaa tgccgccaag gccgcccatt gggccggcgc gttaacgttg
     1921 aagggttggc gcacccgctg catcattgaa ataatttgcc gcggtccgac accatagccg
     1981 acgcgcaagc cagccaaacc gtagagcttg gaaaaggtcc gcagcgtcag catgggccgg
     2041 tcttcgcgat ggtacttgag cgagtccggg tagccggcgt cctggacgta ctcgaaatac
     2101 gcctcgtcga cgatcagcag caaatccttg ggcagctggg cgagaaaggc ttcccactcg
     2161 gcgcgccgat agatcgtccc ggtggggtta ttgggattgg cgagaaaaac gattttggtc
     2221 gcggcggtca ccgcggcggc gatggcgctg agatcatggg tgaagtcgcg cagcgccact
     2281 tgcacgctct tgccacccac cgcttgaacg atcagttggt agaccacgaa cgcctggcgc
     2341 gccatcaccg cctgatcccc cggtcgcatg aaggcgcgca ccgccaactc gatgatctcg
     2401 ttggaaccgt tgccaaagat caactcgtct ggcgccacgc caagcttttt cgccaagccg
     2461 ttttttagat agaagcaatc gccgtcagga tatagatgaa gctgatc
//
LOCUS       DATIRS010000871         2625 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1441682, whole genome shotgun sequence.
ACCESSION   DATIRS010000871 DATIRS010000000
VERSION     DATIRS010000871.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2625
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1441682"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(39..1067)
                     /locus_tag="VLM90_11010"
                     /pseudo
     CDS             complement(39..1067)
                     /locus_tag="VLM90_11010"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
     gene            1430..1945
                     /locus_tag="VLM90_11015"
     CDS             1430..1945
                     /locus_tag="VLM90_11015"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSQ13545.1"
                     /translation="MSEFKRILCPVDLSEFSLEALRLAAQLADRNSAVLDILHVIHNP
                     FDELYMTSITSTDPALLDAYAAESRERAKIVRATEEHAEVLLKQFCRDEVKGVAKVHY
                     HVRQGDPFENILDGAEDFLTDLIVLATHGRTGIKRLVIGNVAEKVVRHAPCPVLTVKP
                     KSLPRVADAAA"
     gene            1956..>2625
                     /locus_tag="VLM90_11020"
     CDS             1956..>2625
                     /locus_tag="VLM90_11020"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HSQ13546.1"
                     /translation="MGVAHVAAGPPLMRIVHPSDFSRLSQVAFAHALKIALLAKAELE
                     IVHVHGHKIGKEQDVHWSDFPGVRETLARWQVVPPSATSEEVDRTGLRVRKILNSEDD
                     PLESMVRYCADHPPDLLVLATYQREGLNRWLHRAVAEPLARRSRAMTLFVPSHGRQFV
                     SPANGAVQLNKILLPVDHQPNAQAAVEEAFFLAEGLGCRDVEFKLLHIGTDKGMPTLF
                     LPHQS"
BASE COUNT          513 a          755 c          790 g          567 t
ORIGIN      
        1 cgatctccta gccagcccac cgtcgcgacg ttgttttatt atggcaactc actctgccgg
       61 tctgggctgg ccggttctcg gtatggcttg cgcggcgccg ttggttcgct gacgcttttt
      121 atgcaacgcg ctcgctccag caactccagg gtctgcacca ggcgatccgg cgagccccag
      181 tcgctccagt agacttcgag caccggcagc accgcgatgg tcgccggcat gcggtcgctg
      241 actttttcca ggaaatcctt ggaaaagttc atcggctcga tcttttcata aagcgcctcg
      301 accgcctgtt cctccagcgg cgtgccgatg gcgtccaaga tgccaatgaa atgataatag
      361 gtcgccgggc aaagccgctg catcatctcc aacaccgttc gcactttgaa caccattatc
      421 atggtgttcc acaggccgcc ggacttgacc agttcctgag ctaggcggca gtcgggcttt
      481 tcgacaaact gggcgacctg gcgcgtgccc cacagattga atagcccctc gcttcactgg
      541 ggcaggatgt aaccatattc gacttccggc gcttgcgctt ccatggcgag aaggacgata
      601 cgcgacggct cacgggccac ggctcgggcg gcgaggtcga catggtccat gaagcggcct
      661 tcgtcaagga tgaaatggtc cgatggaaag accgcgacga tcgcttccgg gttgcgtttg
      721 tagaggtgga gcaacggcag aagaatcccc ggaccggttt ctttgttggc cggctggacg
      781 atcaccgtgt cggcgcggcg gttttggagc tgccgccgca cttcggggtg gcgcagatgt
      841 tgtttgctga cgatggtcaa aacgcgccgg gccgggatca gcaattggga gcgtcggtag
      901 gtatgttcga gcatcgaatg gcgcccgaca aaattgacat attgcttggg caggtcggtg
      961 ccgcgggttt cgcgaatata gggttgcagc cgtttgccat cgcccgccgc cagcaccaag
     1021 ccccaaagcg acgtttgact ttgttcccgc tgacgcagtt caagcatgag gaatctcctg
     1081 gttgcaaagc acagcgccga ttggactgag ttaccgctcg ctaaatctcc cgacagtgat
     1141 cgggtttaat aatttcgcgc cgcaaatgtc atgccgccag ttgccgctgc gcgatcgccg
     1201 atggttcgcg gctttcgcag aaaaaccttc gcagattcga cagcgggtcg gcgattattt
     1261 cgcaggtctg acaaacgccg aattagcagc ggcgaacgat ccgagaattc cgtagcaatc
     1321 caaggcctcg tggctgggcg cagcgccgct gttgtgggca cgtcctttgc ctaatggttc
     1381 agtgagaggg tcgaaagcag taacgggtaa accattaagg aggatggcga tgagcgaatt
     1441 caaacgcata ctttgtccgg tcgatctatc cgagttttcg ttggaggcgt tgcgcttggc
     1501 agcgcaactg gcggaccgta acagcgcggt gttggatatc ttgcacgtta tccataatcc
     1561 cttcgacgag ctctacatga cgtcgattac ttcgaccgat ccggcgctgc tcgacgccta
     1621 tgccgccgag tcgcgcgagc gcgctaagat cgtccgtgcc accgaggaac acgccgaggt
     1681 tctgcttaag cagttctgcc gcgacgaagt caaaggtgtc gccaaagtcc actatcacgt
     1741 tcgccagggc gatcctttcg aaaacatcct cgatggcgcc gaagattttc tcaccgatct
     1801 gattgttttg gcgacccacg gacgcaccgg cattaagcgc ttggtgatcg gcaacgtcgc
     1861 tgagaaagtc gtgcgccatg caccctgccc ggtgctgacg gtgaagccta agagtttgcc
     1921 gagagtggca gacgccgcag cgtaaggagg ttgccatggg tgtcgcccat gtcgcggcgg
     1981 gaccgccgct catgcgcatc gttcatccct cggatttctc gcgtttgagc caagtcgcct
     2041 ttgcccatgc gctcaagatc gccttgctgg cgaaagccga gctggaaatc gttcatgtgc
     2101 acggacacaa gatcggcaag gagcaagatg tccattggag cgattttccc ggtgtccggg
     2161 agactttagc gcgctggcag gtggtgccgc caagcgccac cagcgaagaa gttgatagga
     2221 ccggattgcg cgtacggaaa attctcaact cggaggatga tccgttggag tcgatggtgc
     2281 gttactgcgc cgaccatccg cctgacctgc tggtgttggc gacttatcaa agggaaggtc
     2341 tcaaccgctg gctgcaccgg gcggtggccg agccgctggc gcgccgttcg cgcgccatga
     2401 ccctgttcgt gccaagccac ggccggcaat ttgtttcacc cgccaatggc gcggtgcagc
     2461 tcaacaaaat tcttctgccg gtggatcatc agcctaacgc gcaggcggca gtggaggagg
     2521 ctttttttct cgccgaaggt ttgggttgcc gcgacgtcga attcaagttg ctccatatcg
     2581 gcaccgacaa aggtatgccg acgctatttt tgccgcacca gtccg
//
LOCUS       DATIRS010000872         2423 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1737141, whole genome shotgun sequence.
ACCESSION   DATIRS010000872 DATIRS010000000
VERSION     DATIRS010000872.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2423
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1737141"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..704
                     /locus_tag="VLM90_11025"
     CDS             <1..704
                     /locus_tag="VLM90_11025"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ13547.1"
                     /translation="NLEVRDQEFFGIIGPTGCGKTTLLHIIAGLETPNSGSVQFIGTQ
                     RGKSPVSMVFQESALMPWRNVEENVPLGAEFRKEEPSVYKRISRFFLEVVNLLDFAGA
                     QPHELSGGMKQKVAIARALANDPEVILMDEPFASLDAQTRLLMREELLCIWERDKKTV
                     ILVTHNIDEAVMLCDRIAVMSARPGLIKSIVTVDVPRPRTMKSMRDPDFASCMDKIWN
                     LLKHDVEHALDRGRP"
     gene            858..1580
                     /locus_tag="VLM90_11030"
     CDS             858..1580
                     /locus_tag="VLM90_11030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13548.1"
                     /translation="MNRWTWKPLGWMLLTLSMLGFAACAASLPNYSTIVANADRPATE
                     RELDAARKPSEVLAFYGVKGGDKVADLWAGRGYYTAILSEVVGPTGIVYTQNPSSRDE
                     INQRWKNAKFANVRIADGAFDKLALPRDGSLDFVLIHLNYHDVAIEARPELNKRVLAS
                     LKPGGIYGVVDHSAQDGSGNEAVKTLHRIDKLLVIKDVTGAGFKLAKEGAMLRKPEDK
                     RDFNVNKQRNQSDRFVLAFQRP"
     gene            1605..2264
                     /locus_tag="VLM90_11035"
     CDS             1605..2264
                     /locus_tag="VLM90_11035"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSQ13549.1"
                     /translation="MSNRWLDPMACALTGVLLAGCAAMSAPNYSEVLTNTHRPEAERN
                     IDAVRKPHEVMAFYGVKRGQRVADIFAARGYYTVILSQIVGSEGVVYSANPAPRQELH
                     DRLKLPGMSNVRVLDGPFDKLALPQDGSLDFVLLHLDYHEIAADVRRAMNARIFVALK
                     SGGSYGVVDHSAKEGAGDSEAKTLHRMDKLLVIKEATGVGFRLGEERENAQPRRRHAG
                     F"
BASE COUNT          532 a          681 c          725 g          485 t
ORIGIN      
        1 tcaatcttga ggtgcgcgat caggagttct tcggtatcat cggacccacc ggctgcggca
       61 agacgacctt gctgcatatc attgccggct tggaaacgcc caatagcggc tcggtgcagt
      121 tcatcggcac gcagcgcggc aagtcgccgg tgtcgatggt gtttcaagaa tcggcgctga
      181 tgccctggcg caacgtcgaa gagaacgtcc cgctcggcgc ggagtttcgc aaggaagaac
      241 cgtcggttta caaacggatc agccggtttt ttctcgaagt cgtcaatctc ttagacttcg
      301 ccggcgccca gccgcacgaa ctctccggcg gcatgaaaca aaaagtcgcc atcgcccgcg
      361 ccctggccaa cgatcctgaa gtgattctca tggacgagcc gttcgccagc ttggacgcgc
      421 agacgcgcct gctcatgcgc gaggagctct tgtgcatctg ggagcgggac aagaaaaccg
      481 tcattttggt cactcataac atcgacgaag cggtcatgct gtgcgaccgc atcgccgtga
      541 tgagcgcccg gccgggattg atcaagagca tcgtcaccgt cgatgtgccg cgcccgcgga
      601 cgatgaagag catgcgcgat ccggacttcg ccagctgcat ggataagatc tggaacctgc
      661 tcaagcacga cgtcgaacat gcgctggatc gcggccggcc gtgatgagaa tcgcaggcct
      721 catggccgca aaaaacgcag aagcggcaaa aaacgcttta cgaaattagc gcgggcttta
      781 aacccgcata ctttccttgc atttgttttt ccaatcacta gagttgaagc aatatttaac
      841 ttccgggagg agtgctcatg aatcgttgga catggaaacc tttaggttgg atgcttttga
      901 cactgtcgat gttgggtttc gccgcctgcg cggcctcttt gccaaactac tcgacaatcg
      961 ttgccaacgc cgatcgtccg gccactgagc gcgaactcga cgcagctcgc aaaccgagcg
     1021 aagtgttggc gttctacggc gtcaaaggcg gcgacaaagt tgcggatctg tgggccgggc
     1081 gcggttatta cacagcgatt ctctccgagg tcgtcggacc aaccgggatc gtctacacgc
     1141 agaatcccag ttcccgggat gaaatcaatc aacgctggaa gaacgcaaag ttcgccaacg
     1201 tgcgaatcgc cgacggcgcg ttcgataagc tcgctttgcc gcgggacggc tctttggatt
     1261 tcgtgctgat tcacttgaac tatcatgatg tcgccatcga ggcacgcccg gaattgaaca
     1321 agcgggtatt ggcgtcgctc aaacccggcg gcatctacgg cgtggtcgat cattcggctc
     1381 aggacggtag cggcaatgag gcggtgaaaa ccttgcatcg catcgacaag ttgctggtca
     1441 tcaaagacgt aaccggggcg ggtttcaagc tggcgaaaga aggcgccatg ctgcgcaagc
     1501 ccgaggacaa gcgcgacttc aacgtcaaca agcagcgcaa tcagagtgac cggttcgtgc
     1561 tggcttttca acggccgtag ggcgagcaag accgggagca aattatgtcg aaccgatggt
     1621 tggatccgat ggcttgcgca ttgaccggag ttttgctggc aggttgcgcc gcaatgtcgg
     1681 cgcccaatta ctcggaggtt ttgactaaca cccatcgtcc ggaagcggaa cgaaacatcg
     1741 atgccgtgcg caagccgcac gaggtgatgg cgttctacgg cgtgaagcgc ggccagagag
     1801 tcgccgacat cttcgccgcc cgcggttact acacggtgat cctgtcgcag atcgtcggat
     1861 ccgaaggggt tgtctattcg gccaatcccg cgccgcgcca ggaattgcac gatcgattga
     1921 aactacctgg catgagtaac gtgcgcgtgc tcgacggacc gttcgacaag ctcgcgctgc
     1981 ctcaggatgg ttctctcgat ttcgttttgc tccatcttga ctatcacgag atcgccgccg
     2041 atgttcggcg cgcgatgaac gcccgaatct tcgtcgcgct gaagagtggc ggcagttacg
     2101 gcgtcgtcga tcactcggcg aaagagggcg ccggcgacag cgaagcgaaa acgctgcacc
     2161 gcatggacaa gctgctggtg atcaaggaag cgaccggtgt cggctttcgg ctgggcgaag
     2221 aaagggaaaa tgctcagccg cgccgacgac acgcgggatt ttagcgtggt caaaatccgc
     2281 gacaagagcg accgcttcgt gctgaagttt gtcaagccgt aattagctga agtcaaattt
     2341 tgacagtcat cggggcagca cacagcgccc ctgaatcttg ccggtggtca gcgcagtgcc
     2401 ggcacgacct gttccgccag taa
//
LOCUS       DATIRS010000873         3206 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1931936, whole genome shotgun sequence.
ACCESSION   DATIRS010000873 DATIRS010000000
VERSION     DATIRS010000873.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3206
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1931936"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(467..2098)
                     /locus_tag="VLM90_11040"
     CDS             complement(467..2098)
                     /locus_tag="VLM90_11040"
                     /inference="COORDINATES: protein motif:HMM:NF014325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-binding protein"
                     /protein_id="HSQ13550.1"
                     /translation="MPRSYNRFIILLGSLISLLLVMSLLYMLGMYFLENKPRGFWQAL
                     QWAAGTASTTGYGGDISWQHPLMVVYVVIAQFIGVILLFLIFPIYLIPFLEERFETKL
                     PKESANAKNHVVIFDYGPAVATLITELRQTNIPTVIIDEDEADARHLLEQGHQVIYGN
                     LDEGVLEKANLRAARALIVNSSDDRNAATILAARQLGFSGEILALVEDPYHRQPIILA
                     GASSAYTPRHVLGAALAARASQKVSPTVAGIQHLGHKLQVAEARITRDSPLTGKTLAE
                     AALGQHAGVTVIGQWVGGKLIAPPTPAMRLEAGGILVLVGNDDIIRNFMNLCAGARRL
                     RRHGPFLIAGGGEVGRKVAELLTDCGEETFIIDNRPGPGVNLVGNVLDTQILKQAGLD
                     HVQAVILALSADAPTLFSTVIIKDLAPDVSVIARVNRAENVERIYAAGADFALSISQV
                     SGQLLAWRLLGKESISVDPELRVVKVSTRGLENHHPKQNDLREKIGCTVVAVERGEEL
                     LVEFGADFRFATNDAVYICGSAEAAQKFYQSFPQD"
     gene            complement(2295..2981)
                     /locus_tag="VLM90_11045"
     CDS             complement(2295..2981)
                     /locus_tag="VLM90_11045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13551.1"
                     /translation="MSVRFFDLNVALLGILLLLTSSKNLPGAESPAALTARESGTPLY
                     AQQDLETEPILRLQKGEALTPMAESVGQEIWYMVRTKQGQIGWVRAVDVMVSSQVKDS
                     FKEKESASSNWGAVTEDGKAFGGSYTVDPSSTGGAARGFWTLRDASGATSLRGSWSAQ
                     MHRTGWNGTWRAALEGRGGDFTGSWSAELPASRALRFTDMFEMAAKEAIKGLWTGANQ
                     SGSWSVKTFQ"
BASE COUNT          667 a          900 c          950 g          689 t
ORIGIN      
        1 agccgccgag gtcgacgccc tgctgcgcca actcgtcgtc gtgtcgccgc cgatccagat
       61 ttatatcaac gtcctgatga aaaaatattt gaatcggtag aattttcgat cggcgggatg
      121 agcggattat tttccgcaaa gaacctagcg ctgcacagcc gcaaccaaat gggaaagagt
      181 ttttaccacg aaggtcacga aggacacgaa ggtttcggaa aattattact ccgaacttcg
      241 tgctcttcgt ggtgagaaat ttttcttatt gagcgcgact acttacggac actggtccgg
      301 aaaatttgcg caggctgcgc aaactgttag gtaattgcag tacaaacaac gcaaaaaaga
      361 tttttgattt gtcgggtcgg gtttggaacc cgccctcttg agttgtgtcc taaaaacgtc
      421 ttgaacgatt ggaccgtttt gaacggcttg aacacgggcg gttttattaa tcctgcggga
      481 atgactgata aaacttctgc gccgcttcgg cgctgccgca gatatacacg gcatcgttgg
      541 ttgcaaatct aaagtcagcg ccaaattcca ccagcaattc ctcgccacgc tcgactgcga
      601 ccacggtgca gccgattttt tcccgcaggt cgttttgttt gggatggtga ttctccaggc
      661 cgcgggtgga aactttgacg acccgcagtt cgggatccac cgatatcgac tccttgccga
      721 gcagccgcca ggcgagcagt tgccccgaca cctggctgat cgacagggcg aagtcggcgc
      781 cggcggcgta gatgcgttcg acgttttcgg cgcgattgac ccgggcgatc accgacacgt
      841 cgggcgccaa gtctttgata attaccgtgc tgaaaagtgt cggcgcgtcg gcgctgagcg
      901 cgagaatcac cgcttggaca tggtctaaac ctgcctgttt gagaatctgc gtgtcgagta
      961 cgttgccgac gagattgacg ccggggccgg ggcggttatc gattatgaac gtctcttcac
     1021 cgcagtcggt gagcagctca gcgactttgc gcccgacttc gccgccgccg gcgatcagaa
     1081 acggcccgtg acggcgcagc cggcgcgcgc cggcgcaaag gttcatgaag ttgcggatga
     1141 tgtcgtcatt gcccaccaga acgaggatac cgccggcttc gaggcgcatg gcaggcgtcg
     1201 gtggcgcgat tagtttaccg ccgacccact ggccgatgac ggtgacgccg gcgtgctggc
     1261 cgagcgcagc ctcggccaaa gttttgccgg tgagagggct gtcgcgggtg atgcgcgctt
     1321 cggcgacttg cagcttgtga ccgaggtgtt ggatgccggc caccgtcggg ctgactttct
     1381 ggctggcgcg cgccgctaac gccgcgccga ggacatggcg cggcgtgtag gcgctgctgg
     1441 cgccggcgag aatgatcggt tgacgatggt acgggtcttc gaccagggcg aggatctcgc
     1501 cgctgaagcc caactgccgt gccgccaaga tcgtcgcggc gttgcggtcg tcgctgctat
     1561 tcacaatcag cgcgcgggcc gcgcggagat tggctttctc aagcacgcct tcgtcgagat
     1621 tgccgtagat gacttggtgt ccttgttcga gcaaatggcg cgcgtcggct tcgtcttcgt
     1681 cgatgatcac agtgggaata ttagtttgcc tcagctccgt aatcagcgtg gccaccgccg
     1741 gaccgtagtc gaagatcact acatgattct tggcgttggc agattccttc ggcagcttgg
     1801 tctcgaaccg ttcttcgagg aacggaatca gataaattgg aaaaatcagg aagagcagga
     1861 tcacaccgat gaactgggca atgacgacgt agacgaccat caacggatgc tgccaagaaa
     1921 tatcgccgcc ataaccggtg gtcgacgcgg tgccggcggc ccattgcagc gcctgccaga
     1981 agcctctcgg cttgttctcg agaaaataca tgccgagcat gtagagcagc gacatgacca
     2041 gcagcagtga aattagcgag ccgagcagga tgatgaaacg attataggac cgtggcatta
     2101 ccgccggctc ccaagtcgcg cggtggaacg gtaagttgct ggtgattgaa agagccggtg
     2161 tgacgattcc gtgttgcagt tctctatggc catgcgtaaa ccgtagacat gcttaacatg
     2221 gcgtggcagg agtcttcaac aaaatctcgc accatcctcc ggttttgccg ctacggtgag
     2281 cgaagttgtc actgttactg gaacgttttt accgaccagc tgccggactg attggcgccg
     2341 gtccacaagc ctttgatcgc ttccttggcg gccatctcga acatgtcggt aaagcgcagc
     2401 gcgcgcgaag ccggcagctc ggcagaccaa ctgccggtga aatcgccacc acggccttcg
     2461 agcgcggcgc gccaggtgcc attccagccg gtgcgatgca tctgcgccga ccaggagccg
     2521 cgcagcgagg ttgcgccgct ggcatcgcgc aatgtccaaa agccgcgtgc agcgccaccc
     2581 gtcgagctcg gatcgacggt ataactgccg ccgaaagctt tgccgtcttc ggtgaccgcg
     2641 ccccaattgg acgacgccga ttctttctcc ttgaaagagt ccttgacttg actgctgacc
     2701 atcacgtcca ccgcgcgcac ccaaccgatc tggccttgct tggtgcgcac catgtaccag
     2761 atctcctggc cgacgctctc cgccatcggc gtcagcgcct cgcctttttg caatcgcagg
     2821 atcggctcgg tctccagatc ctgctgcgca tagagcggcg tgcccgattc tcgcgccgtg
     2881 agcgccgcgg gggattcggc gccgggaagg ttctttgagg atgttaggag cagaagaatg
     2941 ccaagtaagg caacgtttag atcgaagaaa cgaacactca tagaaattct ccctggagga
     3001 ttgctgttaa tagacggacg ctgtcgccgt gaatcgacag tttaatctat ttccaatata
     3061 gccgtcacta acgagttgat cgatgcgtct tactgttcaa tccggcggag ataacagcgc
     3121 ttgactgtgg tctagcagac ggagcacttg caagcacata cgaatagtcg tatatcccat
     3181 cgcgatgaag ccgacccgct ttttcg
//
LOCUS       DATIRS010000874         2270 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_556092, whole genome shotgun sequence.
ACCESSION   DATIRS010000874 DATIRS010000000
VERSION     DATIRS010000874.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2270
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_556092"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..417
                     /locus_tag="VLM90_11050"
     CDS             <1..417
                     /locus_tag="VLM90_11050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13552.1"
                     /translation="ESFFAREPFHSWRKNNFVKSIAQSARKRDARLPDTPTIFELMDQ
                     YKTPEQSRRVAAVILAGGVFGRPMVGPAGMAPDRLKILRSAFASALKDPELKVEAEKR
                     SYEVGPVAGQEMEKLAKEVMAQPPAVIDRMKKVLGN"
     gene            complement(754..1290)
                     /locus_tag="VLM90_11055"
     CDS             complement(754..1290)
                     /locus_tag="VLM90_11055"
                     /inference="COORDINATES: protein motif:HMM:NF012478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HSQ13553.1"
                     /translation="MGTIHAFLPARAAVLIAAFFFNNYLFAQTAAKPQTVIQAGAEVS
                     FDYTLTDEGGKVIDSSKGKAPMNYTHGKGEIIPGLEKEMAGMAVGAEKKVTVKPEDGY
                     GPVNPQSFHEVPKDKLPPEALKVGMVLTAQGPQGQAVPVRVHEIKEKTVIMDFNHPLA
                     GKTLSFNVKITGIKPAAK"
     gene            complement(1378..>2270)
                     /locus_tag="VLM90_11060"
     CDS             complement(1378..>2270)
                     /locus_tag="VLM90_11060"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ13554.1"
                     /translation="RLQANYIGKYIPGNPSVVAQNMPAAGGIVAANYVYGVAKPDGLT
                     LASINPAHYFNQIRGNKEIKFDWTKFTWLASSDKSEHMLYMRADAPYKTIQDVRKASE
                     APKCGATGTGTSGHYIPRMLEEALGTKFTIVTGYAGGNEIDLATERNEVVCRSFTTAA
                     YFAREPYHTWRKKNFVLILLQTGEKRDPRLPDTPLLGDLMNVFKTSPLGRRVVTVMLG
                     SGELGRPIVTHPATPPDRTKILRDAFMKSMADPALLADASKLNLEITPVSGEELTKIA
                     KEVIDQPPEVLDRIRKILAE"
BASE COUNT          457 a          661 c          642 g          510 t
ORIGIN      
        1 gaatctttct ttgcgcgcga gccctttcac agctggcgca agaataactt cgtaaagagc
       61 atcgcccagt cggctcgcaa acgcgatgcg cggctgcccg acacgccgac gatcttcgag
      121 ctgatggatc agtataagac gccggagcag tcgcgccgcg tcgctgccgt tatcctggcc
      181 ggcggcgtct tcggccggcc catggtcggt cccgcgggca tggcgccgga ccgtttgaaa
      241 atcctacgca gcgctttcgc cagcgcgctt aaggatcctg agcttaaagt cgaagccgaa
      301 aagcgcagct atgaagtggg accggtcgcc ggccaggaga tggaaaaact tgccaaggaa
      361 gtcatggctc agccgcccgc ggtgatcgat agaatgaaaa aggtgttggg aaactaattt
      421 ctgaatgtgc tatgccgacg ctggagcctt caccgttgtt taaacgaatc cgtttcgctc
      481 cagaaagctg agcacaatct catcgaaggt tgtcgggact tcgagacagc aggcatgacc
      541 ggcgccgggg atcacatgat gctccgcgcc ggcgattctc gcgctcagaa atgcgccgct
      601 tgatagagaa acagcgccgg tcgaagggat tggcgtgcat cggaacgaag ggataaccct
      661 cgcccgagac ttcgtagcgc aatcttatac gatcacgaga gcagtaaggc atgcgaagct
      721 ggacaacaat ctggacttga caggcagaaa cgcctatttc gccgccggct taatgcccgt
      781 gatcttaaca ttgaatgata acgtcttgcc ggcgagcgga tggttgaaat ccataatcac
      841 cgttttttcc ttgatctcgt gaacacgcac cgggaccgct tggccttgcg gcccctgggc
      901 cgtcaacacc atgccaactt tcaacgcttc gggcgggagc ttgtctttgg gcacctcgtg
      961 aaaggactgt ggattcaccg gcccgtagcc gtcttccggc ttgaccgtca cctttttttc
     1021 cgcgcccacc gccatccccg ccatctcctt ctccaagccg ggaatgatct ctcccttgcc
     1081 atgagtgtaa ttcatcggcg ctttgccttt gctcgaatcg atcactttgc cgccttcgtc
     1141 ggttagcgtg taatcgaacg atacctcggc gcctgcttga atcaccgttt gcggttttgc
     1201 cgcagtctgg gcaaagaggt aattattgaa aaaaaacgcc gcaatcaaaa cggccgcgcg
     1261 ggcgggcaag aaagcgtgaa tcgtccccat gtgctcctcc gaagtgaccg ggatctctgt
     1321 ggtgaagtat tcacgttacg cgctctccgc gcccggttca accaaagtgc gcccgcgtta
     1381 ctccgccaat atctttctta tccgatcgag cacctcgggc ggttgatcga tcacctcctt
     1441 ggcgatcttg gtcagctcct caccgctgac cggagtgatc tctagattga gcttgctggc
     1501 atccgccaac agtgcgggat cggccatgct tttcatgaag gcatcgcgca agatcttcgt
     1561 tctgtccggc ggcgtcgccg gatgggtcac gatcggccgc ccgagctcgc cggaaccgag
     1621 catgacggtg acgactcggc gccccagagg cgaggttttg aatacattca tgagatcgcc
     1681 gagcaatggc gtgtccggca accgcgggtc gcgcttttcc ccggtctgca aaagtattag
     1741 aacgaagttc ttcttgcgcc aggtatgata aggctcgcgc gcgaaataag ccgccgtcgt
     1801 gaacgaacgg cacacgactt cgtttcgctc ggtggccaaa tcgatttcgt taccgccggc
     1861 gtaacccgtg acgatcgtaa acttcgtgcc cagggcttcc tcaagcatgc gcggaatata
     1921 atggccgctg gttcccgtgc cggtggcgcc gcatttgggc gcttccgatg ctttgcgcac
     1981 gtcctgtatg gtcttgtacg gcgcgtcggc gcgcatgtag agcatatgtt cggacttatc
     2041 ggaactggcc agccaggtga atttagtcca gtcaaatttt atttctttgt tgcctcggat
     2101 ctgattgaaa taatgcgccg ggttgatcga cgccaaggtc aagccgtcgg gtttcgccac
     2161 accgtaaacg tagtttgccg cgacgattcc tcccgccgcg ggcatgttct gcgcgaccac
     2221 gctcggattg ccggggatat acttgccgat gtagttcgct tgcagtcgcg
//
LOCUS       DATIRS010000875         3116 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_458881, whole genome shotgun sequence.
ACCESSION   DATIRS010000875 DATIRS010000000
VERSION     DATIRS010000875.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3116
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_458881"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(73..1047)
                     /locus_tag="VLM90_11065"
     CDS             complement(73..1047)
                     /locus_tag="VLM90_11065"
                     /inference="COORDINATES: protein motif:HMM:NF012708.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HSQ13555.1"
                     /translation="MAALGYFEILDGKGGVSERIAVDGFPVTVGRAYGNQVILADPFV
                     CPRHLKIDQDEQGRLLASDLDSVNGFYPGSGNERVAQLELQSGSQFRIGHTTLRYVSV
                     DHPPAPTLVDGAAKVSPLESPYAAVISGVVLVLLLCLEAYLSSVERVTVAKIIGDTWV
                     TVSMLATWAGMWALASRIVVSRFNFARHVTIACLALLAISAIGVVAEWSEFFLPRIPM
                     LWIAGVFGYGLVLAGLIYGHLGASSLVRRRSRLWTAAAISLVVVGTSAISDFAARSKF
                     STIMDYTGVVKPIDAAWVPATSVEEFVASSEKLKKDLDSLTKKAKALQ"
     gene            complement(1035..2237)
                     /locus_tag="VLM90_11070"
     CDS             complement(1035..2237)
                     /locus_tag="VLM90_11070"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HSQ13556.1"
                     /translation="MPGTTQEIFKQFSEHVVKIEVVETSSAAKASTGTGFFADNSGRV
                     VTNYHVISKLVHSPERYRIDVIDVAGGTTVGTVLGVDVVYDLAILRTNRQPKGHLVFE
                     SKPVAQGTRLYSLGHPRDLGLSIVEGTHNGLLKHTLYPKVHFTGSLNPGMSGGPTLTQ
                     DGKVVGINVATEGNQISFLVPAERALALLDKTAKGEMPPPASFLADVGRQIHDNQTRY
                     LAGMFDAKTPRVALAPYDLPTKPTEFFRCWADAFRRKELPYVSVTHDCSTDDYIFVSS
                     EQSSGIVRFYHQLLSTSELNPARFFTLYSAQLQGGNAAMFGNEEEVTSFRCQTRNVAT
                     ANGKLKGVLCARQYIKLPALYDAVFRVATLGSRNTGLVSTLSLSGVSFDNVQALSRRY
                     MESIKWQH"
     gene            complement(2357..>3116)
                     /locus_tag="VLM90_11075"
     CDS             complement(2357..>3116)
                     /locus_tag="VLM90_11075"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HSQ13557.1"
                     /translation="SGLLSLLSDPDDPKVMGMAVSDYVTGLSAGYGILAALLARNDSG
                     VGCRVETSLLQATLSFIGETAAGYLRTGNVPNRMARVKNAHAFALVCQDGKPLAIHCS
                     VPEKFWLALLKAAERMDIAADERFKTRDARRQNYEALEQTLAPTFKTKPRGEWLKILE
                     AHDVPAVPLYDVAEVLDDPQVKHLGLIEEVEHPTAGKLRFVGGPVHFDSLAKQDAKPP
                     PLVGEQSAKILRELGYDDAIINDLLTQGVSQVVR"
BASE COUNT          659 a          942 c          921 g          594 t
ORIGIN      
        1 ccttgaacga aattaccgcg tagactagcc agatggttcc gcttatgtca aatctccgcg
       61 ccgccattcg cctcactgca gcgctttagc tttcttggtg aggctgtcga gatccttttt
      121 gagcttctct gaactcgcga caaattcctc caccgaagtc gccggcaccc aggccgcgtc
      181 gatcggcttg acgacgccgg tgtagtccat gatcgtcgag aatttgctgc gcgcagcgaa
      241 gtcgctgatc gcgctggtgc cgacgacgac caaactaatt gcggcggcgg tccataggcg
      301 cgaacggcgt cgcaccagcg aggacgctcc gagatgaccg tagatcagcc ccgccagcac
      361 cagcccgtaa ccgaacacac cggcgatcca gagcatggga atccgcggca ggaaaaactc
      421 cgaccactcg gcgacgacgc cgatagcgct gatcgccaac agtgccaagc aggcgatggt
      481 cacatgccgg gcaaagttaa aacggctgac gacgatccgg ctggccagcg cccacatgcc
      541 cgcccaggtc gccagcatcg acaccgtgac ccaagtgtcg ccgatgattt ttgccacggt
      601 cacgcgctcg acactggaga ggtaggcctc caaacagagc agcaacacca agaccacacc
      661 cgaaatcacc gccgcatagg gcgactccag gggtgaaact tttgccgcgc catcgaccag
      721 cgtcggcgcc ggcggatgat cgacgctgac gtagcgcagg gtggtatgac cgatacgaaa
      781 ctggctgccg gattgaagtt ccaactgggc gacgcgctca ttacccgagc caggatagaa
      841 gccgttgacg ctatcgagat cgctggcgag caaacggcct tgttcgtcct ggtcaatctt
      901 gagatggcgc gggcagacga acggatcggc gagaatcacc tgattgccat aggcgcggcc
      961 gacggtcact ggaaatccat ccaccgcgat gcgctcgctg acgccgccct tgccgtcgag
     1021 gatttcgaaa tagcctagtg ctgccacttg atgctctcca tgtagcgccg gctcaacgcc
     1081 tgaacattgt cgaagctcac gccggagagc gaaagcgtcg acaccaagcc ggtattacgc
     1141 gagccgaggg tggcgacgcg gaacaccgca tcgtagagcg ccggcagctt gatgtactgg
     1201 cgcgcgcaca gcactccctt gagcttgccg ttggcggtcg cgacgttacg cgtctggcag
     1261 cgaaacgatg tgacttcctc ttcgttgccg aacatcgccg cgttgccgcc ttgcaactgt
     1321 gcggagtaga gcgtgaagaa gcgcgccgga ttgagctcgc tggtggacaa tagttgatga
     1381 tagaagcgca cgatgcccga ggactgttcg ctggaaacga aaatgtaatc gtccgtcgag
     1441 cagtcatggg tcaccgaaac gtaaggcaat tccttacggc gaaaggcgtc cgcccaacag
     1501 cgaaaaaatt cagtcggttt cgtcggcaga tcgtacggcg ccagcgcaac ccgcggcgtt
     1561 tttgcatcga acatgccggc gagatagcgc gtttgattgt cgtggatctg ccggccgaca
     1621 tcggcgagga aactcgccgg cggcggcatt tcgccctttg cggtcttatc cagcaaagcc
     1681 aaggcccgct cggccggcac gagaaagctg atttgattac cttcggtggc gacgttgatc
     1741 cccacgactt tgccgtcttg ggtcaatgtc ggcccgccgc tcatgccggg attgagcgat
     1801 ccggtgaaat gcactttggg atagagcgta tgtttgagca aaccgttgtg cgtgccttcg
     1861 acgatggaaa gcccaagatc gcgcggatgg ccgagggaat agagccgcgt tccctgcgcc
     1921 accggcttgg actcgaagac gagatggccc ttgggctggc gattggtccg caggatggcc
     1981 aagtcataga ccacatcgac gcccagcacc gtgccgacgg tcgtgccgcc ggcaacgtcg
     2041 atcacatcga tccgataacg ctccggcgaa tgcaccaact tggaaatcac atggtagttg
     2101 gtgacgacgc gtccagagtt gtcggcgaaa aaacccgtgc ccgtggacgc cttcgccgcc
     2161 gaactggttt ccaccacttc aattttcacg acatgctcgg aaaactgctt gaagatctcc
     2221 tgcgtggtgc cgggcataaa ttgagcgtga gtcgccggaa ttatcagcac gaaacaccac
     2281 gaaagaatga gagcgctggt tgctagtaat ttattcatcg gcgggctgag tagattgttt
     2341 acgcgaccga tggaagctaa cgaacgactt gactcacgcc ctgggttagc aagtcgttga
     2401 tgattgcatc gtcatatccc aattctcgga gaatctttgc gctctgctcc cccaccagcg
     2461 gcggcggctt ggcgtcttgt ttggcgagac tgtcaaaatg caccggtccg ccgacaaacc
     2521 ttagtttgcc ggccgtggga tgctcgacct cttcgatcag cccgagatgt ttgacctgcg
     2581 ggtcgtcgag cacttcggca acatcgtaga gcggcaccgc cggcacgtcg tgggcttcga
     2641 ggattttcaa ccactcgccg cgcggcttgg ttttgaatgt cggcgccagc gtctgttcca
     2701 gcgcctcgta gttctgccgc cgtgcgtcgc gggttttgaa acgctcatcc gcggcaatgt
     2761 ccatgcgctc ggcggccttt aacagtgcca gccagaattt ttccggcacc gaacaatgga
     2821 tcgccaaggg cttgccgtcc tggcaaacca gcgcgaacgc atgggcgttc ttcacccgcg
     2881 ccatgcgatt gggcacgttg ccggtgcgca gataaccggc agcggtctcg ccgatgaacg
     2941 acagcgtcgc ctgcagcagc gaagtttcaa cgcggcagcc gacgccggaa tcgttccgcg
     3001 ccaagagcgc cgcgagaata ccgtagccgg cggacagtcc agtgacgtaa tccgacaccg
     3061 ccatgcccat gactttggga tcgtcgggat cgctgagcaa actcaacaaa ccgctc
//
LOCUS       DATIRS010000876         1992 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_162615, whole genome shotgun sequence.
ACCESSION   DATIRS010000876 DATIRS010000000
VERSION     DATIRS010000876.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1992)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1992)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1992
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162615"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(138..1070)
                     /locus_tag="VLM90_11080"
     CDS             complement(138..1070)
                     /locus_tag="VLM90_11080"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13558.1"
                     /translation="MFFAIDAGAQTAPQKITVSMSSTGMPSIQLFIARERGFFREEGF
                     DPQLIRMSANAAIAAGVAGDLDALGSVGSAVRGIMRGVPLRVVAVDLRRPIFWLVSRP
                     EFRNAKELKGKALGIATINGSQHSAARKMLAIHGVDADKELTFSQVGDEATQLQAMIS
                     NSIQVAGLTPPYVFLARDKFKMNVLESSIDKFASIQQGIGVQTKYVQESPDWLRRLLR
                     VKAKSARFFHDNEKETAEILARVWKVDLATATEWYRRCKPAFTPTGIPTDDEIKEFLA
                     EEALALKLTESVPAARIFDFTLQRAVNKELGIKG"
     gene            complement(1261..>1992)
                     /locus_tag="VLM90_11085"
     CDS             complement(1261..>1992)
                     /locus_tag="VLM90_11085"
                     /inference="COORDINATES: protein motif:HMM:NF013757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator C-terminal
                     domain-containing protein"
                     /protein_id="HSQ13559.1"
                     /translation="GATLADLAADAGCAVAEVEAALSVLAAINLCENDPVFAHRYRLA
                     ERAAELGMSGFNIALRSRAWPYLQRLHDLTQQKIGLAVIEGDFHRFIDECPHRPQSVL
                     AALPPLRYAEPARLRAGSTAKAILASFPEPLAEQILARNADVVDPSNEAYVDVEAWRR
                     AAPSRDELARIRQAGYAASRGERGRDTGTVSLSAPVVDRAGSVCGVLWIGGTAPEQEA
                     PVAAALVQAAKQLSTELAQVSSVSR"
BASE COUNT          402 a          603 c          570 g          417 t
ORIGIN      
        1 gtgtgcgcgt cgatgagttc cgccggccgc aacagactac cgatattgtc agcacgaaaa
       61 gagctagcca tgttttttgt ccggttcttt ctttttaacg ttttgaacgg cttgaaccac
      121 tggaacgatt tgaactttta acctttaatg cctagttcct tattcaccgc ccgctgcaag
      181 gtaaagtcga atatccgcgc cgccggcact gactcggtca actttagcgc caacgcctcc
      241 tcggcgagaa actccttgat ctcgtcgtcg gtgggaatgc ccgtcggcgt aaacgccggc
      301 ttacagcggc ggtaccattc ggtggccgtc gccaaatcga ctttccatac ccgcgcgagg
      361 atttctgcgg tttctttctc gttgtcgtgg aagaagcgcg ccgacttggc cttgacgcgc
      421 aacagccggc gcagccaatc gggcgactcc tggacgtact tggtttgcac accgatgcct
      481 tgctggatgc tggcaaattt gtcgatggaa ctttccaaga cgttcatctt gaacttgtcg
      541 cgggcaagaa acacataggg tggggtcaat ccggcgacct ggatcgaatt gctgatcatg
      601 gcttgcagct gggtcgcctc atcgcctacc tgagaaaaag tcagctcttt gtccgcgtcg
      661 acgccatgga tcgcgagcat ttttcgcgct gcggaatgtt ggctgccgtt gatggtcgcg
      721 atgccaagtg ccttgccttt caattctttg gcattgcgga actccggacg cgacactaac
      781 cagaaaatcg gccggcgcag atcgacggcg acgacgcgca agggcacgcc gcgcatgata
      841 ccgcgcaccg cgctgcccac tgaaccgagg gcgtcgagat cgccggcgac gccggcggcg
      901 atcgccgcgt tggcgctcat gcgaatcaat tgcggatcga agccttcctc gcgaaagaag
      961 cctctctccc gcgcgatgaa aagttggatc gacggcatgc cggtgctcga catgctgacg
     1021 gtgattttct gcggcgcagt ctgggcgccg gcatcgatcg cgaaaaacaa taggcaacaa
     1081 attgccggcc taaggatcaa tccgggctgt gaaaaccaat tcctcagccg atccaaaata
     1141 gtgtcaaagc aaaaacccat agtgaaattt cccctttgtc atttggccgg cgttgattgt
     1201 gaatctccag gaaaccgatt tctgcgtaaa ttttcagtaa atgtcgttcc ggcaaacccg
     1261 ttagcgcgaa accgaggaaa cctgggccaa ctccgtcgaa agttgtttcg ctgcctgcac
     1321 cagcgcggcc gccaccggcg cttcttgctc cggcgcggtt ccgccgatcc ataaaacgcc
     1381 gcacacgctg ccggcgcgat cgacgaccgg cgcagacaat gaaaccgtcc ccgtgtctcg
     1441 gccccgttcg ccgcgactcg cggcataacc tgcctggcgg atgcgcgcca gttcatctcg
     1501 gctcggcgcc gcgcgccgcc aggcttcaac atcgacatac gcttcattgg acggatcgac
     1561 gacatcggca ttccgcgcca agatctgctc ggccaacggt tccgggaagg atgccagaat
     1621 cgctttggcg gtagagccgg cgcgcaatcg ggccggctcg gcgtagcgca gcggcggcag
     1681 cgctgccagc acgctctgcg gccgatgcgg acattcgtcg atgaatcgat gaaagtcgcc
     1741 ttcgatcaca gccaaaccga tcttttgttg ggtcagatca tgcagtcgtt gcaggtaggg
     1801 ccaggcgcgg ctgcgcaaag cgatgttgaa gccgctcatg cccagctccg ctgcccgctc
     1861 agccaatcgg tagcgatggg cgaagaccgg atcgttttcg caaagattga tagccgctag
     1921 aacgctgagc gcggcttcga cttccgcgac tgcgcaaccg gcgtccgcgg cgagatctgc
     1981 aagtgttgct cc
//
LOCUS       DATIRS010000877         2136 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_556265, whole genome shotgun sequence.
ACCESSION   DATIRS010000877 DATIRS010000000
VERSION     DATIRS010000877.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2136
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_556265"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..900
                     /locus_tag="VLM90_11090"
     CDS             <1..900
                     /locus_tag="VLM90_11090"
                     /inference="COORDINATES: protein motif:HMM:NF020896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050485 - oxidoreductase activity, acting
                     on X-H and Y-H to form an X-Y bond, with a disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine/sarcosine/betaine reductase component B
                     subunit"
                     /protein_id="HSQ13560.1"
                     /translation="APAAGSHYSTLHHLIVVPHTRQNIPAAARQRAYRLAQLKIAVRL
                     AQVAVAVAPVRCEIFDNADTEAGACLPRLVYIGQIFSRQRKPEADEHILYGADTEGML
                     PTLLHPNEWLDGALVPSYHASIGGAETYFYQNHPVILELYRRHRAGEINFAGSVATIA
                     SANNFDRERNTRFAANLTKWALRADAAVLTKFGGGVPHTDLSETARLLETMGVKTAVQ
                     VTDLARDHRVESALLFNFPEVDAIVCIGGNDTHWRLPQVERVIAANSGLAEMLAGPLE
                     IDSLNVIGVANQQGASRLRSIVY"
     gene            1325..>2136
                     /locus_tag="VLM90_11095"
     CDS             1325..>2136
                     /locus_tag="VLM90_11095"
                     /inference="COORDINATES: protein motif:HMM:NF024773.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HSQ13561.1"
                     /translation="MATFTAKPVGNLLRAKSVAIIGASQKGAWPQGIYRNLKGAKFPG
                     GVYLINPNYQELYGDKCYPNLAACPEVPDELLILIPTRAVLGVLEEAAKLGTRSATIY
                     TAGFGEGDDDKGKERAQQMRELCDKTGMVICGPNCMGSYSVGEGLWTFPTATPLLKKG
                     PVGLIFQSGGSLGNWIKGATERGIGFSYAISSGNEVNLDLVDYLSFLVDDPDTKVITL
                     MVEGIRRPNEFMAVAEQALQMGKPILAVKLGRSEMGKRQAISHTGSLAGADEV"
BASE COUNT          453 a          592 c          628 g          463 t
ORIGIN      
        1 gcgccggcgg cgggctcgca ttacagcacg ctgcaccatt tgatcgtcgt gccgcacacc
       61 cggcagaaca tcccggccgc ggcgcggcag cgtgcttatc gtttggcgca attgaaaatc
      121 gccgtgcgct tggcgcaagt cgcggttgct gtcgcgcccg tgcgctgcga aatattcgat
      181 aacgcggata cagaagccgg cgcctgcttg ccccggctcg tttacatagg gcaaattttt
      241 tcgcgccagc gcaagcctga agccgatgaa catattctct acggtgctga taccgaaggc
      301 atgttgccga ccctgcttca tcccaacgag tggctcgatg gcgcgttggt gccgtcgtac
      361 cacgcgtcaa tcggcggcgc agagacctat ttctatcaaa accatccggt gattctcgaa
      421 ctctaccggc gccatcgggc gggtgaaata aatttcgccg gctcggtagc gaccattgcg
      481 tcggcgaata atttcgaccg cgagcgcaac acccgctttg cggcgaatct aactaagtgg
      541 gcgctgcgcg ccgatgccgc ggtgctgacc aagttcggcg gcggcgtgcc gcacacggat
      601 ttgtcggaga ccgcgcgctt gctcgaaacc atgggcgtga agaccgccgt ccaggtcacc
      661 gacttggcgc gcgatcatag agtagagtcg gcgctcttgt tcaacttccc cgaggtcgac
      721 gccatcgtct gcatcggcgg caatgacacc cactggcgcc tgccccaggt cgagcgcgtg
      781 atcgcggcca atagcggtct ggcggagatg ctcgccggcc cgttggaaat cgactcgctc
      841 aatgtgatcg gcgtggcaaa tcagcagggg gcgtcacgct tgcgctccat cgtttactga
      901 gatgatgaag aatttggccg catagacctt agcgcagcag agacgcaacc aaatgggaaa
      961 gagtttttac cacgaaggtc acgaaggact cgaaggtttc ggaaaattat ttctccgaac
     1021 ttcgtgctct tcgtgtcctt cgtggtgaga ttggatttct tcattgagca cggcaactta
     1081 gcagtaccag tacggaaaat ttgcgcaagc cacgcaatct ttaagctatt gcagtgcaaa
     1141 gttcgcaaag aaacttcttc ggaatatctc tcgccaagac gcaaaggcgc aaagtttaga
     1201 gaatatagtt tccgaacttt gcgtcttggc gcctttgcga gggtaatccg atttcgaatt
     1261 ccattcttgc agtcacccga cgtctatgac atagcaatcc catctcaatt tagaaggaaa
     1321 ttacatggct acattcacgg cgaaaccggt cggtaattta ttgcgcgcga agtcggtggc
     1381 gatcatcggc gcatcgcaga agggcgcgtg gccgcagggg atttatcgca atttgaaagg
     1441 cgcgaagttt cctggcggag tttatttgat caatcccaat taccaagaac tttatggcga
     1501 caaatgttat cccaacttgg cggcctgccc ggaagttccc gatgagttgc tgatcctcat
     1561 tcccactcgc gccgttctcg gcgtgcttga agaggcggcg aagttgggca cgcgctcggc
     1621 gacgatttac accgccggtt tcggcgaagg cgatgatgac aagggcaaag agcgggcgca
     1681 gcagatgcgc gagctgtgcg acaagaccgg catggtgatc tgcgggccta attgcatggg
     1741 ttcctattcc gtcggcgaag ggttgtggac gtttcccacc gcgacgccat tattgaagaa
     1801 aggcccggtg ggtttgattt ttcagagcgg cggttcgctc ggcaactgga tcaagggcgc
     1861 cactgagcgc ggtatcggat tctcctatgc gatttccagc ggcaacgagg tgaatttgga
     1921 tttggtcgac tacttgtcgt tcttggtcga cgatcccgac accaaggtga tcacgctgat
     1981 ggtcgaaggc attcgccgcc ccaacgagtt tatggccgtc gccgaacagg cgctgcaaat
     2041 gggcaagccg atcttagccg tgaagctcgg ccgctcggag atgggcaaac gccaggcgat
     2101 ctcccacacc ggatcgctgg ccggcgccga cgaagt
//
LOCUS       DATIRS010000878         1570 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_64528, whole genome shotgun sequence.
ACCESSION   DATIRS010000878 DATIRS010000000
VERSION     DATIRS010000878.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1570
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64528"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..375
                     /locus_tag="VLM90_11100"
     CDS             <1..375
                     /locus_tag="VLM90_11100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="deiodinase-related protein"
                     /protein_id="HSQ13562.1"
                     /translation="KVSYARELQRQEDIRLPIIVDHLDGRIHRAYGVWPNAIFVIHKD
                     GRLVFRSNMANHRELRQFLEDLVAAERAVAAGQVVHLQYSERVVAHEADQATHRRVYQ
                     RAGPKAFEDYWAKRPQQRNRWP"
     gene            513..1394
                     /locus_tag="VLM90_11105"
     CDS             513..1394
                     /locus_tag="VLM90_11105"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13563.1"
                     /translation="MRIGYSVGGLIPFPLIVAKENRFFEQAGLDVELINIPPTIAVTA
                     LISGDIQYVIFAGTTLNAAVRGLPVKLVMVYNDRPLFSLMSRADIRSIKELKGKVLGV
                     ATLTSGESFLSRRLLKDAGIDADKEMTLRVIGNTPDRFQALRAGAVDATTLTTPVDIH
                     AERTGLRRLAFMGDSLESINGGYGVSDRWLQQRPDQIRKMIAVAFRGMAHARAQRQES
                     IALIASKWKLEREVAEKAFELTIKTWSDNGISSDQALQMGIEESLRLSNSKQSVPISR
                     VADFSLAREVYRELKGK"
BASE COUNT          331 a          427 c          477 g          335 t
ORIGIN      
        1 aaagtttctt acgcccgtga gttgcagcga caggaagaca tccgtttgcc gattatcgtc
       61 gatcatctcg acggccgaat tcatcgcgcc tacggggttt ggcccaacgc tatttttgta
      121 attcacaagg acggccggtt ggtttttcgc agcaatatgg cgaatcaccg tgagctgcgc
      181 cagttcctag aagatttggt cgccgcggaa cgagccgtcg ctgctgggca ggtggtgcac
      241 ttgcaatact ctgaacgggt ggtggcgcac gaagccgatc aagcgaccca tcggcgcgtc
      301 taccagcgcg ccgggccgaa agcgttcgaa gactactggg ccaagcggcc gcagcagcga
      361 aaccggtggc cgtgatgatg aagtatcgtt ctaagatcgg atcggacgga tcagtcggat
      421 tcggccgatc ggtcagatgt ctcctagcgg cgctcgccat ccttggtagc atcgcagccc
      481 tcgcggatgc tgccacaaag gacttggagc gggtgcgcat cggctactcc gtgggcgggc
      541 tgattccgtt cccgttgatc gtcgccaagg agaatcgctt cttcgagcag gccggccttg
      601 atgtcgagct gatcaatatt ccgccgacca tcgcggtgac ggcgttgatc tcgggcgaca
      661 ttcaatacgt gatcttcgcc ggcaccacgc tgaacgcggc ggtgcgcggt ttgccggtca
      721 agctggtgat ggtttacaac gaccggccgt tgttctcctt gatgtcgcgt gcggatattc
      781 gctcgatcaa ggagctcaaa ggcaaagtgt tgggagtcgc gaccctgacc tctggggaat
      841 cgtttttgtc gcgccgcttg ctcaaagatg ccggcatcga tgccgacaaa gagatgacgc
      901 tgcgggtcat cggcaatacc ccggatcgct ttcaggcgct gcgcgccggc gcggtggacg
      961 ccactacttt aactacgccg gtggatatcc acgccgagcg cacgggactg agaagactgg
     1021 cgttcatggg cgacagcttg gagagcatca acggcggcta cggcgtttcc gaccgctggt
     1081 tgcaacaacg gcccgatcag attaggaaaa tgatcgccgt ggcttttcgc ggcatggccc
     1141 atgcccgcgc ccagcgccaa gaatccatcg cgctgatcgc gtcaaagtgg aaacttgagc
     1201 gggaggtggc cgagaaagcc ttcgaactga cgatcaagac ttggtccgac aacggcattt
     1261 cctcggacca ggcgctgcaa atgggcatcg aagaaagttt gagactttcc aacagcaaac
     1321 aatccgtgcc gatctcgcgg gtggctgatt tcagcttggc gcgagaagtc tatcgcgagt
     1381 tgaaggggaa gtgacgaagg tttgatactg gcgtggaata cttttcacca cgaagacacg
     1441 aagagcacga agttcggaat attttatatc gaaaccttcg tgtccttcgt gctcttcttc
     1501 gaaaatacat gtgaggggat gatatgcaca tcgataacga ctctctgttc cgtcataccg
     1561 gcgtaggccg
//
LOCUS       DATIRS010000879         2059 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1442141, whole genome shotgun sequence.
ACCESSION   DATIRS010000879 DATIRS010000000
VERSION     DATIRS010000879.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2059
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1442141"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1272)
                     /locus_tag="VLM90_11110"
     CDS             complement(<1..1272)
                     /locus_tag="VLM90_11110"
                     /inference="COORDINATES: protein motif:HMM:NF023222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HSQ13564.1"
                     /translation="MPIRRGADYIKALRDGREVWHAGKRIADVTAHSGFSGTIKTLAD
                     LYDKQHAPEHRDVMTCEYEGERISYSYLPPKNHDELLLKRRNIEFWAKQTFGQMGRYP
                     EFVAELVVGLLDWSHHIEKTNKQWADNARAYHRYVSRNDLCLTQALTDQYYDRTKPVG
                     KQADPDLILHVVGETKEGPVVRGLRTLATLAPIADEVIVYPNRPREPDEHDYAIAFAI
                     PMNTKGLKILCRDLYAEHADPERQPLTTRFDEVDAALIFDDVVVPWERMFVYKDPQLL
                     SGIMYIHTWGQYSTILRLVVKLEAFLGVAQILTQYAKRNTSPPSQILLASLMQDIEIL
                     RSCIQVGESKGYRAGGGTWAPLLSSAYRVHSIEASDRAERTMEGLLTSTLMLSGGASD
                     LKSADLGPFVERYFRGGAPDTKEHLRLMAVAA"
     gene            1470..>2059
                     /locus_tag="VLM90_11115"
     CDS             1470..>2059
                     /locus_tag="VLM90_11115"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13565.1"
                     /translation="MIIKVLIALNLLLFASSNGYTGQASSAPLSMRFLYPSLSGTFAA
                     AWIAKEAGYFAAENLDVELIRVGGSTRIVASMVGGSAPIIHAGASASMAATVAGSDSV
                     IIGCMSTKSPFHLIARPEIKQPSDLKGKRAGISAFGATSDFLVRLALRRFGLEPGKDV
                     AILPTGGESEAFAALQAGSVQVAALAYPAYIHAMKM"
BASE COUNT          404 a          638 c          606 g          411 t
ORIGIN      
        1 cgccgccacc gccatcaggc gcaggtgctc tttggtatcc ggcgcgccgc cgcggaagta
       61 gcgctcgaca aacggcccga ggtcggcgct tttcaaatcc gacgccccgc cgctcaacat
      121 cagcgtgctc gtcaataatc cttccatggt ccgctcggcg cggtccgaag cttcaatgct
      181 gtgaacccgg tacgccgagc tcaacagcgg cgcccaggtg ccgccgccgg cgcggtagcc
      241 tttggactcg cccacttgaa tgcacgagcg caggatctcg atatcctgca tcaaactcgc
      301 cagcaggatc tgcgacggcg ggctggtgtt gcgcttggcg tactgcgtca agatctgcgc
      361 cacgccgaga aatgcctcga gcttgaccac cagccgcagt atcgtcgagt actgccccca
      421 ggtgtgaatg tacatgattc cagaaagcaa ctgcggatct ttgtaaacga acatgcgctc
      481 ccagggtacg acgacatcgt cgaagatcag cgccgcatcg acttcgtcga agcgcgtggt
      541 cagcggctgg cgctcgggat cggcatgttc ggcgtaaaga tcgcggcaaa gaatttttaa
      601 gcctttggtg ttcatcggga tcgcgaaggc gatggcgtaa tcatgctcgt cgggttcccg
      661 cggccggttc ggataaacga tgacctcgtc ggcgatcggc gccaaggtcg ccagcgtgcg
      721 caagccgcgc accaccggac cttccttggt ctcgccgacg acatgtaaaa ttaaatcggg
      781 atcggcctgt ttaccaaccg gcttggtgcg gtcgtagtac tggtcggtca aggcttgagt
      841 gaggcagagg tcgttgcggc tgacatagcg atgataggcg cgggcgttgt cggcccattg
      901 cttgttggtc ttttcgatat gatgggacca gtcaagcagg ccaaccacca gctcggcgac
      961 aaactccggg tagcgcccca tctggccaaa ggtctgcttc gcccagaatt cgatattgcg
     1021 ccgcttaagc aaaagctcgt catgattctt cggcggcaag tagctgtagg agatccgctc
     1081 gccttcgtac tcgcaggtca tgacatcgcg gtgctccggc gcatgctgct tgtcgtacag
     1141 atcggccaag gtcttgatcg tgccgctgaa gccggaatgc gccgtcacgt cggcgatgcg
     1201 cttacccgcg tgccacacct cgcggccgtc gcgcagcgcc ttgatataat ccgcccctcg
     1261 tctaatgggc atgagaaaaa acctccagag ccgatattac tgctgtttaa agcatcaaac
     1321 tttatagcgt taatccgaca ccgcaagcaa ccgcccgaca cttgttgatg aattctaaaa
     1381 tcgttaacag cgctcaggtt gacagccggc gcgccagcaa gttaagaccg cgctagcacc
     1441 cggctgatcc gacgaatggg gagaacgcca tgatcatcaa agtgctgatt gctctgaacc
     1501 tgttgttgtt cgcttcgagt aacggataca ccggacaagc gtcgagcgcg ccgctttcca
     1561 tgcgcttcct ttacccgagc ctgagcggca ccttcgccgc ggcttggatc gccaaggaag
     1621 cgggatactt tgccgcggaa aatctcgacg tcgaactgat tcgcgtcggc ggcagcacgc
     1681 gcatcgtcgc ctccatggtc ggcggcagcg cgccaatcat ccacgccggc gcctccgcca
     1741 gcatggccgc caccgtggcg ggcagcgatt cggtgatcat cggctgcatg agcaccaagt
     1801 cgccgtttca tctgatcgcc cgtccggaga tcaagcagcc cagcgatcta aaaggcaagc
     1861 gcgccggcat cagcgctttc ggcgcgactt ctgattttct cgtgcggctg gcgttgcgca
     1921 ggttcggctt ggaacccggc aaggacgtgg cgattttgcc caccggcggc gagtcggaag
     1981 ccttcgccgc attgcaggcc ggcagcgtgc aggtcgccgc cttggcctat cccgcctaca
     2041 tccacgcaat gaagatgga
//
LOCUS       DATIRS010000880         1774 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1737528, whole genome shotgun sequence.
ACCESSION   DATIRS010000880 DATIRS010000000
VERSION     DATIRS010000880.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1774
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1737528"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(47..361)
                     /locus_tag="VLM90_11120"
     CDS             complement(47..361)
                     /locus_tag="VLM90_11120"
                     /inference="COORDINATES: protein motif:HMM:TIGR00689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RpiB/LacA/LacB family sugar-phosphate isomerase"
                     /protein_id="HSQ13566.1"
                     /translation="MIAIGCDHGGVELKDFLVGYLRAKGAEVCDVGTQGRDSVDYPDY
                     GREVSQRVSGGQAERGVLICTSGIGMSIVANKFPGVRAALVADLEGARSSREHNNANI
                     WC"
     gene            complement(536..772)
                     /gene="acpP"
                     /locus_tag="VLM90_11125"
     CDS             complement(536..772)
                     /gene="acpP"
                     /locus_tag="VLM90_11125"
                     /inference="COORDINATES: protein motif:HMM:TIGR00517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HSQ13567.1"
                     /translation="MAGSIKDRVKEIICEQLGVSADEVTPEASFIEDLGADSLDIVEL
                     VMALEEEYEMEISDEDAEKIKTVQDIITYIEAHR"
     gene            complement(798..1544)
                     /gene="fabG"
                     /locus_tag="VLM90_11130"
     CDS             complement(798..1544)
                     /gene="fabG"
                     /locus_tag="VLM90_11130"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein]
                     reductase (NADPH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] reductase"
                     /protein_id="HSQ13568.1"
                     /translation="MAKLQGRIALVTGASRGIGRAIALALGRSGAHVVINYRGNQAAA
                     EETLSLLQAANGNGELSLFDIADESQVEAAVKRVVDAHKSVDILVNNAGVTSDGLLMR
                     MKSSDWDQVIGTNLKGTMLCTKVVSRQMIKQRAGRIVNLSSVVGQMGNVGQSLYAASK
                     AGIIGFTKAIARELAPRAITVNAVAPGFIDTDMTAGLPEKLRQDFLRSIPLGRFGTCQ
                     EVADMVVFLAGPGGSYVTGQVFNVNGGLYM"
     gene            complement(1546..>1774)
                     /locus_tag="VLM90_11135"
     CDS             complement(1546..>1774)
                     /locus_tag="VLM90_11135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13569.1"
                     /translation="DINRDCHRVKDLLVEQAVRPVRWEESVKRLSNLGCQKALEIGPG
                     KVLRGLIKRIAPSLETVNLETPADLARLKAA"
BASE COUNT          359 a          565 c          478 g          372 t
ORIGIN      
        1 gtatcgacaa tcgcttgtgc cagttgcggc tcggtcttgg cgccgctcag caccaaatat
       61 tggcattgtt atgctcgcgg ctcgaccgcg cgccttcaag atccgccacc agcgccgcgc
      121 gcacgccagg aaatttattg gcgacgatcg acatgccgat gccgctggtg cagatgagca
      181 cgccgcgctc cgcttgaccg ccggaaaccc gctgggacac ctcccggcca taatcggggt
      241 aatccaccga atcccggccc tgggtgccga catcgcagac ctctgctcct ttggcgcgca
      301 aatagccgac tagaaaatct ttcaattcca cgccgccgtg gtcgcagccg atggcgatca
      361 tgatttcacg ctgccctcaa aatgcgtcga tgccggaagc gaatcggaaa aacacaaatg
      421 gctcgagcgc ggttaccgcc ggccgccgct ggaacgacat cgaacccgag attgcctaga
      481 cgaaatccgt agcgccggcc gccgatcacg gagcatcgcg gacggacaga ggcggttatc
      541 gatgcgcctc gatgtaggtg atgatatcct ggacggtttt gatcttctcc gcatcttcgt
      601 cggagatctc catctcatat tcctcttcca gagccatcac caactcgaca atatcgagcg
      661 agtcggcacc caggtcctcg ataaacgacg cttccggcgt cacctcgtcg gcgctcacgc
      721 ctagttgctc gcaaatgatt tctttcactc tgtccttgat cgatcccgcc atcttcactt
      781 acctcctctg ttaatcctta catgtataaa ccgccattga cgttgaacac ctggccggtc
      841 acataactgc ctcccggtcc ggctagaaac acaaccatat cggcgacttc ctggcaagtg
      901 ccgaagcgcc ccaaaggtat ggagcggaga aaatcctggc gcagcttttc cggcaagccg
      961 gccgtcatat cggtgtcgat aaaacccggc gccacggcgt tgacggtaat ggcgcgcggc
     1021 gccagctccc gggcaatcgc tttggtgaag ccgatgatgc cggccttgga agccgcgtaa
     1081 agcgactggc cgacgttgcc catttggccg accaccgacg acagattgac gatgcggccg
     1141 gcgcgctgct tgatcatctg gcgcgagacc actttggtgc agagcatcgt gcccttgaga
     1201 ttggtgccga tgacttgatc ccagtccgag cttttcattc gcatgagcaa accatcggaa
     1261 gtgacgccgg cattgttgac gagaatatcg acacttttgt gcgcgtcgac gacccgcttc
     1321 acggccgctt cgacctgaga ttcgtcggcg atatcgaaga ggctaagttc gccgttgcca
     1381 ttggccgcct gcaataagct aagcgtttct tcggccgcgg cttggttgcc cctatagttg
     1441 atcaccacat gagcgccgga tcggccgagc gccagcgcaa tagcccggcc gattccccgg
     1501 ctagcgccgg tgaccaaggc gatccgaccc tgaagttttg ccatgctaag cggctttcag
     1561 cctggcgaga tccgccggcg tttcaagatt aacggtttcc aacgacggcg cgatgcgctt
     1621 gatcaagccc ctgagcacct tgccggggcc gatctccagg gctttttgac agcccagatt
     1681 ggatagtctt ttgaccgact cttcccaccg taccggccgc accgcttgtt cgacaagcag
     1741 atccttcacc cgatggcaat cacgattaat gtcg
//
LOCUS       DATIRS010000881         1582 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1049001, whole genome shotgun sequence.
ACCESSION   DATIRS010000881 DATIRS010000000
VERSION     DATIRS010000881.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1582
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1049001"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1582
                     /locus_tag="VLM90_11140"
     CDS             <1..>1582
                     /locus_tag="VLM90_11140"
                     /inference="COORDINATES: protein motif:HMM:NF025152.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4175 family protein"
                     /protein_id="HSQ13570.1"
                     /translation="ARLDKTLRYRVATGAFTSATFTAEAVDTPEIANVQLMLYPPAYT
                     GLASISSPEGSIEGLKGSSLRLDAVTTKDVVKAEIVMDDGKKIPLKIDGRKLQANLVL
                     FQSQSYRILVEDSHGFKNSPISYELRVKPDGFPTVDLLRPTEDLEINGDEVLNLEYSA
                     RDDFGIGEVNLIVKIGDREDKIRLARDDAKRLILRDQYKWDLGRLGLRDQDDAVFFLQ
                     VFDNDTISGPKLGTSKSVRLKLKNLKGEHQQIAEMVKDLNARMINLLADHLETPNPNE
                     KPTAQSKEMEQRFEQNLADAAKRTEEIMRRTEKDRMTDFATYSDLQALKRNLDFTQQE
                     LLRKQEQAATTDDKLKARDDISAELERMSLLSEDIGKRMKAQELASTAQDLARNQERL
                     MDSLDKLQSGDKNLDAIMKQIADLAKSLMELQQAMAQLAQQMPDDFMNAEQMQGLGMD
                     QMFKELDEIRKKLQAVDIEGARQLARELFNQMAQMVAAMQNMQRSQMASSMGRMQGEM
                     QRQTSELQEIAREQQEILV"
BASE COUNT          399 a          476 c          453 g          254 t
ORIGIN      
        1 tcgcccgcct cgacaagact ctgcgctacc gggtggcgac cggcgccttc acttcggcaa
       61 ccttcaccgc cgaagcggtg gacacgccgg agatcgccaa cgttcagctc atgctctacc
      121 cgccggccta caccgggctg gcatcgatct catcgccgga gggcagcatc gaagggctca
      181 aaggctcgtc gctgcgcctc gatgcggtga cgaccaaaga tgtcgtcaaa gccgagatcg
      241 tcatggacga cggcaagaag attccgctca agatcgacgg ccgcaagctg caagcgaatc
      301 tggtgctgtt tcaatcgcag tcctatcgca tattggtcga agacagccat ggctttaaga
      361 attcgccgat cagctatgaa ctgcgtgtca aacccgatgg cttccccacc gtcgacctgc
      421 tccggccgac ggaagacttg gaaatcaacg gcgacgaagt tttgaatttg gaatacagcg
      481 cccgcgacga tttcggcatc ggcgaggtca atctcatcgt caagatcggc gaccgcgaag
      541 ataaaattcg tttggccaga gacgatgcca agcggctgat cctgcgcgat caatataaat
      601 gggacctcgg ccggctcggc ctgcgcgacc aggacgacgc ggtctttttc ctgcaagtct
      661 tcgacaacga caccatctcc ggcccgaaac tgggcacgtc gaagtcggtg cgtttgaagt
      721 tgaagaatct caaaggcgaa caccaacaga tcgccgagat ggtcaaagac ctgaacgcgc
      781 gcatgattaa cctcttggcc gatcatctgg aaacgcccaa tccgaacgag aagccgacgg
      841 cgcagtcgaa ggaaatggaa cagcgcttcg agcaaaacct cgccgacgcc gccaagcgca
      901 ccgaagaaat catgcgccgc acggaaaaag accgcatgac cgattttgcg acctactccg
      961 atctccaggc gctcaaacgc aatctcgact tcacccaaca ggaactcttg cgcaagcagg
     1021 agcaagccgc cacgaccgac gataaactca aggcgcggga tgacatatca gctgaactcg
     1081 agcgcatgtc gctcctctcc gaggatatcg gcaagcgcat gaaggcccag gaactcgcct
     1141 cgacggcgca ggatttggcg cgcaaccaag agcggctgat ggactctctc gataagctgc
     1201 agagcggcga caagaatctc gacgcgatca tgaagcagat cgccgatctg gccaaatccc
     1261 taatggagct gcagcaagcg atggcgcagc tggcccagca gatgcccgac gacttcatga
     1321 acgccgagca gatgcagggg ctcggcatgg accagatgtt caaggaactc gacgagatcc
     1381 gcaaaaaact ccaggccgtc gacatcgagg gcgcgcgcca gctggcgcgc gagctattta
     1441 accagatggc gcaaatggtc gcggcgatgc agaacatgca gcgctcgcag atggcctcga
     1501 gcatggggcg catgcagggc gaaatgcagc gccagacaag cgaattgcag gaaatcgccc
     1561 gggagcagca ggaaatcctg gt
//
LOCUS       DATIRS010000882         3434 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1343721, whole genome shotgun sequence.
ACCESSION   DATIRS010000882 DATIRS010000000
VERSION     DATIRS010000882.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3434)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3434)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3434
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1343721"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(152..1441)
                     /locus_tag="VLM90_11145"
     CDS             complement(152..1441)
                     /locus_tag="VLM90_11145"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HSQ13571.1"
                     /translation="MKLMVKNLRRVRALTRAVLLASLGGCTTTSEAPPPALPAPTVEA
                     VAAAPAPVAAPATAAVARRFEEALTDAANTLFSQIRASANGEKQLLVIDPLIDGVSGM
                     QSNATRTMASRIGELVRGHYPQFDLQPFSAANVRRSPKVLVGTFTAVNSEGDTTGTRE
                     AYRICLALADLKSGTVAAKGTARAHMPGVDHAPTPYFQDSPAWMKEASTEGYVNTCQT
                     SKPGDAIQPAYLDSILAGSLISDAIAAYDAGRYADALDRYSSALELPTGHQLRVFNGV
                     YLANLKLGRQAAANDAFSRIVAYGLAKNRLAVKFLFKPGSTAFVPDKQVSAHYPMWMK
                     EIARGAIQSKSCLEVIGHTSRSGAEPLNQRLSQLRADYIKKRLQGEEPQLAKRITAQG
                     VGSRDNLVGTGKDDISDALDRRVVFQVTACGGGTQYY"
     gene            complement(1438..2367)
                     /locus_tag="VLM90_11150"
     CDS             complement(1438..2367)
                     /locus_tag="VLM90_11150"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003953 - NAD+ nucleosidase activity
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="toll/interleukin-1 receptor domain-containing
                     protein"
                     /protein_id="HSQ13572.1"
                     /translation="MADIFLSYARENSEIAKLLSERLEHLGWSVWWDWEVPAGQNWRD
                     MIEQSLASMRCMIVLWSMDSIDSDWVKEEAEKGKAQRKLVAALIDEVNPPMGFRDLQA
                     ANLIGWDGSLDFPGFGNLIDALEAQLGKPVKIPAAEPAPASEVDAARGRQEIPPARFD
                     SSELCHIANRLPWRSYAKAIVLLIILIAGSIERQERAPGTTSPASLPVTTLDAREMPP
                     SPPLTIRGPTIAPPAQAQTPKFAPPSVTDHSRHLLPERKPAKRIDESRPRNAAIPNTA
                     PSAHPCSEIFAGAQLGAALADGDRETLRKDCSS"
     gene            2651..>3434
                     /locus_tag="VLM90_11155"
     CDS             2651..>3434
                     /locus_tag="VLM90_11155"
                     /inference="COORDINATES: protein motif:HMM:NF025091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/PEP mutase family protein"
                     /protein_id="HSQ13573.1"
                     /translation="MKTKSTTRLKELLAQPELLVMSGGFSPLHARMSEITGYQAFFMS
                     GSQVAAYVYGYPDVGLLGLNEMVESVRRITNVTDIPVFADADTGYGNAVNVYYTVQAY
                     IRAGAAGLHIEDQEAPKKSGTLAGRRLISVEEAVGKYRAAVAAKQELDADFVVCARCD
                     SVGSDGGNFEDAVRRGVAYAKDAGVDAVWMNTMTEREQIAEACRRIPVPVIAPYYGPK
                     PSPTFDEFHKLGVSAVLYPSLNTANGMQSTWEVLHEVKERGPV"
BASE COUNT          674 a          974 c         1067 g          719 t
ORIGIN      
        1 gaagccgata ccgatctgag ttcgcagcga aaacttagtc gatgatcagc gtgagcgtca
       61 agggaaaatc gttggctgga gaaatcgcaa actaaaacgc cctggcgcga tcgtcgtgtc
      121 agggcgtgga aaacaactaa gcaagtgata atcaatagta ctgcgtgccg ccgccgcacg
      181 cggtcacctg gaaaaccacg cggcgatcca aggcatcgga gatatcgtct ttgccggtgc
      241 cgacgagatt gtcgcgcgag ccgacgccct gggcggtgat gcgtttggcc aattgcggct
      301 cttcaccctg gagtcttttc ttgatgtaat cggcgcgcaa ttgagacaat cgttggttga
      361 gtggttcggc gccggagcgg ctggtgtggc caatcacttc caggcaactt ttgctttgta
      421 tcgcgccgcg ggcaatttcc ttcatccaca tcggataatg cgcgctcacc tgcttgtcgg
      481 gtacgaacgc ggtgctgccc ggcttgaaaa gaaatttcac ggccagacga tttttcgcca
      541 agccataagc gacgatccgg ctaaaggcat cgttggccgc ggcctgccgg ccgagtttca
      601 agttggcgag gtagacgcca ttgaaaaccc gcaattgatg gccggtgggt agctcgaggg
      661 cgctggaata acggtcgagg gcgtcggcat agcggccggc gtcgtaagca gcgatcgcgt
      721 cgctgatcaa gcttcccgcc aaaatgctat cgagataagc aggctgaatc gcgtccccag
      781 gtttactggt ctggcaggta tttacatagc cctcggtcga cgcctctttc atccacgccg
      841 gactatcttg aaagtacggc gtcggcgcgt ggtcgacgcc tggcatgtgc gcgcgggcag
      901 ttcccttcgc cgccacggtg cccgacttta aatctgccag agccaggcag atgcgatagg
      961 cttccctggt gcccgtggta tcgccctcgc tattcaccgc tgtgaaggtg ccgaccaaaa
     1021 ctttgggcga tcggcgcaca ttggcggcgg agaagggttg caggtcgaac tgcggatagt
     1081 ggccgcgcac cagctcgccg atgcgcgaag ccatggtcct ggtggcgttg gattgcatgc
     1141 ccgaaacgcc gtcgatcagg ggatcgatga cgagcagctg tttttcaccg ttagccgaag
     1201 cccggatttg tgagaacaat gtgttggcgg catcggtcag cgcttcttcg aagcggcgcg
     1261 cgaccgcggc ggtcgctggt gcggccactg gcgccggcgc cgctgcgacg gcttcgacgg
     1321 tgggtgctgg aagcgccggc ggcggtgctt cactcgtggt tgtgcaaccg ccgagcgacg
     1381 ctaataagac cgcgcgggtc agcgctctca cgcgtcgtaa gtttttgacc atgagtttca
     1441 tgatgagcag tcctttctca gcgtctctcg gtcgccgtcc gccagcgccg cgccgagctg
     1501 cgcgccggca aaaatctcac tacaaggatg agcgctcggc gcggtatttg ggatcgcggc
     1561 gtttctcggg cgcgactcgt caattctttt ggctggcttt cgctccggta ataaatgccg
     1621 tgaatggtcg gtcaccgacg gcggggcgaa tttcggagtt tgcgcttgtg cgggcggcgc
     1681 aatcgttggc cccctgattg ttaagggtgg cgatggcggc atttcgcgag cgtcgagagt
     1741 tgtgaccggc agcgaggccg gcgaagttgt ccctggagcg cgctcctgtc gctcgatgga
     1801 gccggcgatc aagatgatga gcagaacgat tgccttggca taggaccgcc agggtagccg
     1861 gttggctata tggcatagct cagaagagtc gaatcgagcc ggtggaatct cttgccggcc
     1921 acgcgctgca tcgacttcgc tagcgggtgc cggttcggca gcgggaattt tgactggctt
     1981 accgagctgc gcttctaacg cgtcgatgag attgccaaat ccaggaaaat ctagggaacc
     2041 atcccagcca atcaaatttg cggcttggag gtcgcggaag cccatcggcg ggttgacctc
     2101 gtcgatcagc gcagctacca gcttgcgttg ggctttgcct ttctcggctt cttccttgac
     2161 ccagtcgctg tcgatggaat ccatcgacca caggacaatc atgcagcgca tgctggccag
     2221 cgactgctcg atcatgtcgc gccagttttg gcccgccggg acctcccagt cccaccacac
     2281 cgaccagccg aggtgctcca agcgctcact taggagcttg gcgatctcgc tattctctcg
     2341 ggcgtagctg aggaaaatat cggccatgga tcgtaaccca aacgctagtc gctaacgctg
     2401 gttaaatgag gacacttcca ctccacgcgg tatcggagca acaagcaggc cattgtcgcc
     2461 accctctaag ctcgcctaaa aatgcctttt atggactcac tcagaactaa aagggaaaca
     2521 cttttgtccg gcgtgtcaaa aactgtactg cgatatcccg cgatcaccaa catagcctga
     2581 cgccaactta ccggcgtagc tgcgcgcaag catttctccg cggcaagcga tgtgataatg
     2641 gaaagtcact atgaagacga aatcgaccac tcgtttgaaa gaactgttgg cgcagcccga
     2701 gctgctcgtc atgtctggcg gctttagccc attgcacgcg cgcatgtcgg agattaccgg
     2761 ctaccaagct ttcttcatgt caggctccca ggtggcggcc tatgtctatg gctatcccga
     2821 tgtcggtttg ctcggcttga acgagatggt cgagtcggtg cggcgcatca ccaacgtcac
     2881 cgacattccg gtctttgccg atgccgacac cggttacggc aacgccgtga atgtttatta
     2941 caccgtgcaa gcatatatcc gcgccggggc ggcgggtttg catatcgagg atcaagaagc
     3001 gccgaagaaa tcggggacgc tggcgggacg gcgcttgatc tcggtggaag aagcggtggg
     3061 caaataccgg gcggcggtgg cggcgaaaca ggagctcgac gccgactttg tcgtctgcgc
     3121 ccgttgcgat tcggtcggct ccgatggcgg taacttcgaa gacgcggtgc gccgcggtgt
     3181 cgcctacgcc aaggatgccg gcgtcgatgc cgtctggatg aataccatga ccgagcgcga
     3241 gcaaattgcc gaggcgtgcc ggcgcattcc ggtgccggtg atcgcgccct attacgggcc
     3301 gaagccgtcg ccgactttcg atgaatttca caagctcggc gtgtcggcgg tgctttatcc
     3361 gagcttaaac accgccaacg gtatgcaatc gacttgggaa gtactgcacg aggtcaagga
     3421 acgcggcccg gtgg
//
LOCUS       DATIRS010000883         2305 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1835503, whole genome shotgun sequence.
ACCESSION   DATIRS010000883 DATIRS010000000
VERSION     DATIRS010000883.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2305
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1835503"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1109)
                     /locus_tag="VLM90_11160"
     CDS             complement(<1..1109)
                     /locus_tag="VLM90_11160"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSQ13574.1"
                     /translation="MSELTVVGKPVTRVDANEKVTGQIVYGYDLVLPNMLYGKTLFST
                     KAHARIKKLNTEKAKQLPGVVAVVTGEDAPWTHGESIKDKPFLAQGKVRYIGEPVAAV
                     AAEDEDIAQAAVKLIEVEYEDLPVYTDPEQACKPGAVAIHEDFPNYRKVNFIVPGAHA
                     NIAEHFKLRTGDVAQGFKASDLVIEEKYFVPMIQHAAMEPHSAHAQFDKESGRLTIWV
                     ANDAPFRALHEITEALNMPKENVRFINPAQGGGFGSKGGLKVEPIAVALAFHTNGRPV
                     RVKFNREETFISTLTRHEAVVYSKTGVKKDGTLMAREMTIYWGAGAYAEKSPTVCIRG
                     SLPAPGPYRIPHVKVDGYAVYTNKPVAGSYRGYGIP"
     gene            complement(1171..1650)
                     /locus_tag="VLM90_11165"
     CDS             complement(1171..1650)
                     /locus_tag="VLM90_11165"
                     /inference="COORDINATES: protein motif:HMM:NF013923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HSQ13575.1"
                     /translation="MKNQIEFTLNGTRMSREVPNHRLLLDLLRDETGATGTKEGCGTG
                     DCGACTVFLNGKPVNSCLILSGELDGADIVTIEGLQIGPELHPVQKAFIQDGGAQCGY
                     CTPGMLMMSKALLDENQNPTEDDIRYALSGNLCRCTGYAKIIQAVQDAAAIIRGKSV"
     gene            complement(1752..>2305)
                     /locus_tag="VLM90_11170"
     CDS             complement(1752..>2305)
                     /locus_tag="VLM90_11170"
                     /inference="COORDINATES: protein motif:HMM:NF015415.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HSQ13576.1"
                     /translation="NATPSADVAPSLIALNATAKIASAGDKRTVSMEEFFRGPGQNVM
                     NADEILTEVTIPKTSPQLVGEYIKFSPRDMMDLAYVGVAVAYNLGTDKKCSGVRIVLG
                     AVAPTPIRARNSEALLEGKILTEELAAQVGDEAARESKPISDVRSSADYRRAIVGIMT
                     KRALLNAAVGPAKSWVDRRDRRY"
BASE COUNT          414 a          640 c          696 g          555 t
ORIGIN      
        1 ggaatgccgt aacctcggta agaaccggcg acgggcttgt tagtgtaaac ggcgtagccg
       61 tcgactttga cgtggggaat gcgatagggg ccgggcgcgg ggaggctgcc gcgaatacaa
      121 accgtcgggc ttttttcggc gtacgcgccg gcgccccaat agatcgtcat ctcgcgcgcc
      181 atcaacgtgc cgtctttttt tacgccggtt ttagagtaaa ccaccgcttc gtgccgggtt
      241 agcgtcgaaa taaaagtttc ttcgcggttg aactttacgc gcaccggtcg gccgttggta
      301 tgaaaagcga gagccacggc gatgggctcg actttcaaac cgcctttgga gccgaaaccg
      361 ccgccctgcg ccggattgat gaagcggacg ttctccttgg gcatgttcaa cgcttcggtg
      421 atctcgtgca acgcccggaa cggcgcgtcg ttggcgaccc agatggtcaa gcggccgctc
      481 tctttatcaa actgggcatg ggccgagtgg ggctccatgg cggcatgctg gatcatcggc
      541 acgaaatatt tctcttcgat gacgagatcg gatgctttga agccttgcgc gacatcaccc
      601 gtccgcagtt tgaagtgttc ggcgatgttg gcgtgcgccc ccgggacgat gaaattgacc
      661 ttgcggtaat tagggaagtc ctcatgaatc gccaccgcgc cgggcttaca ggcttgctcc
      721 gggtcggtgt aaaccggcag atcttcgtat tcgacctcga tcagtttgac cgcggcctgc
      781 gcgatgtctt cgtcttccgc cgctaccgcc gctaccggct cgccgatata gcgcactttg
      841 ccctgagcaa ggaacggttt gtctttgatc gattcgccgt gggtccaggg cgcgtcttct
      901 ccggttacca ccgcaacgac gccgggcaac tgcttggcct tctccgtgtt aagtttttta
      961 atcctggcat gggctttggt gctgaacaga gtcttgccgt agagcatgtt gggcaggacg
     1021 agatcatagc catagacaat ctggccggtg actttttcgt tggcatctac ccgggtaact
     1081 ggttttccga cgactgtgag ttcagacatg attttcctct aggagttcaa ggttcaagag
     1141 ttcaaaggtt caagcaaata aatcgccgtg tcacacgctc ttgccgcgta tgatcgccgc
     1201 cgcgtcttga accgcctgaa taattttcgc gtagccggtg cagcggcata ggttacctga
     1261 gagtgcgtac cggatgtcgt cctcggtagg gttctggttt tcgtcgagca gcgctttgga
     1321 catcatcagc atgccgggcg tgcagtagcc gcactgggcg ccgccgtcct ggatgaacgc
     1381 tttctgaacc ggatgcagct cggggccgat ttggagcccc tcgatggtga cgatatccgc
     1441 gccgtcgagc tcgccggaga gaatcaggca ggaattgacc ggtttgccgt tgagaaatac
     1501 cgtgcaggcg ccgcagtcgc cggtgccgca gccttccttg gttccggtcg cgccggtctc
     1561 atcgcgcaac aggtcgagca aaagacgatg attcgggact tcgcggctca tgcgagtgcc
     1621 gtttagagta aattcaatct ggtttttcat gacaacctca gttcaggtcg gtgtcatgga
     1681 gtgctggaat agtggagtgt tgggtcggga ttccgaaacc catttttcca gtactccatc
     1741 actccattct ttcaatatct tcgatcgcgg cgatcgaccc aggactttgc cggaccgacg
     1801 gcggcgttga gcagcgctcg cttggtcatg atgccaacga tggcgcggcg atagtcagcg
     1861 gacgagcgca catcgctgat cggtttgctc tctctcgccg cttcgtcgcc gacttgcgca
     1921 gcgagctctt cggtcaatat tttgccttcg agcagcgctt cagaattcct tgcgcggatc
     1981 ggcgtgggcg ccaccgcgcc gaggacgatc ctaactccgc tacatttctt gtccgtgccg
     2041 aggttgtagg cgaccgcgac gccaacgtag gcgaggtcca tcatatcgcg tggtgagaat
     2101 tttatgtatt cgccgaccaa ttgcgggctg gttttgggaa tcgtgacctc ggtcaggatt
     2161 tcgtccgcgt tcatgacgtt ttgtccgggg ccgcggaaaa actcttccat ggacacggtt
     2221 cttttatcac cggcgctggc aatcttcgcg gttgcgttga gcgcgatcag gctcggcgcc
     2281 acgtcggccg atggcgtggc gttgg
//
LOCUS       DATIRS010000884         3520 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1147753, whole genome shotgun sequence.
ACCESSION   DATIRS010000884 DATIRS010000000
VERSION     DATIRS010000884.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3520
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1147753"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..502
                     /locus_tag="VLM90_11175"
     CDS             <1..502
                     /locus_tag="VLM90_11175"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HSQ13577.1"
                     /translation="LDTGGGLLKAKEFLQDSTFIVINTDALIDINLAEVLNYHRQRHA
                     AATLVLRPDADADRYGSIDIGADGRICRFLEHRSPEAPVGAVKKLMFTGVQILEPRIF
                     DYMDGRGLKKFSTTRETYPRMLGAGEKLCGYCFQGFWQDLGTQERIAEAERQLGCGQA
                     RLHFLQ"
     gene            572..1474
                     /locus_tag="VLM90_11180"
     CDS             572..1474
                     /locus_tag="VLM90_11180"
                     /inference="COORDINATES: protein motif:HMM:NF012647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prenyltransferase/squalene oxidase
                     repeat-containing protein"
                     /protein_id="HSQ13578.1"
                     /translation="MLDRIITDLLQNQNPDGGWGALRGKRSNTEATSLAVAALKALTD
                     NELAESRKRGVAWLVRQQNQDQSWPLNETVKEGSWTTALAITALGDSAEHSERVLAAA
                     RWLLEQEGSKPGILAEIVLWATGKSGANKLNKDLIGWSWVPRSFSWVEPTSYALIALK
                     KQRGRLAGTNVDERIRQADAMIYDRMCTGGGWNYGNSKVLDYALWPYPDITALALIAM
                     QDHAKEKANQESLQVLSKIALETDSGFGLCWAAICLNLYGQDHSQFHKRIEKRFAATA
                     FLGETKTLALALIALRGKSNPFHI"
     gene            1484..2476
                     /locus_tag="VLM90_11185"
     CDS             1484..2476
                     /locus_tag="VLM90_11185"
                     /inference="COORDINATES: protein motif:HMM:NF015948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF362 domain-containing protein"
                     /protein_id="HSQ13579.1"
                     /translation="MRRRQFLKYTAMGSLSTTLANCQSSGRWQPEAFRKQAASRVAVL
                     TAKGYDQPLKDVILRGIKLCGLQVTGKRIVLKPNLVEFDPKGVINTNPAVIEAAIDAF
                     RTLGAAEVIVAEGPGHRRDNEYLLSASGLYDVIREHKVRYVDLNSDDVRATAVRSSYT
                     SFKQLYLPETLFNADLLVSMPKLKTHHWAGVTLSMKNLFGIIPGTVYGWPKNILHWQG
                     IDNSILDINSSLPLPQFAIVDGIVGMEGNGPLQGRAKNAGVLIFGDDFVSVDASAARL
                     MKLEPRKVIHLAKADAFLGNLAEEKIAQIGEKLESLQQDFEIIEDLKDLKKLTG"
     gene            complement(2521..3018)
                     /locus_tag="VLM90_11190"
     CDS             complement(2521..3018)
                     /locus_tag="VLM90_11190"
                     /inference="COORDINATES: protein motif:HMM:NF012309.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006801 - superoxide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase family protein"
                     /protein_id="HSQ13580.1"
                     /translation="MSLSVGAGCSLVGSGERATAELKDKDGKTIGMASFVEAGSGVRV
                     RLEVKGLSAGLHAVHIHAVGKCDAPAFTSAGGHFNPAQRKHGHRSPEGAHAGDLPNML
                     VAKDGMGRFEVFTNGVTLRAGPLSIFDADGSALVVHAGVDDYATDPTGNAGDRAACGL
                     IVARN"
     gene            3219..>3520
                     /locus_tag="VLM90_11195"
     CDS             3219..>3520
                     /locus_tag="VLM90_11195"
                     /inference="COORDINATES: protein motif:HMM:NF014582.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HSQ13581.1"
                     /translation="MSALAIYLPTVVFISLLGGFLPLMRALSQRALALLLSFSAGVLL
                     GAVFFHMLPEVGNVLGADLGLPVLAGFLLIFVMERFVFVHACEEHDCDIHQMGLPA"
BASE COUNT          781 a         1063 c          970 g          706 t
ORIGIN      
        1 cttagacacc ggcggcggcc tgctgaaagc caaagagttt ttacaggaca gcacgttcat
       61 cgtcatcaac accgacgcgc taatcgacat aaatttagcc gaagtgctga actaccatcg
      121 gcaacgtcat gcggcagcca cactggtgct gcggcccgat gccgacgccg accgctatgg
      181 ctccatcgat atcggcgccg acggccggat ctgccgcttt ctcgagcacc gatctccgga
      241 agcgccggtt ggcgcagtga aaaaattgat gttcaccggc gtgcagattc tcgaaccgcg
      301 gatcttcgac tacatggatg gccgcggctt aaaaaaattc agcaccacca gggaaaccta
      361 tccgcgcatg ttgggcgccg gtgagaagct ctgcggctat tgtttccaag gcttctggca
      421 agatctcggc acccaagaac ggatcgcgga agcggaacgg cagctcggct gcggccaggc
      481 gcggctgcat tttctccaat agccgcgccg agtcccgtga ccaaagatct gctataatag
      541 ccccgagtga ccgaaccact gccaattagc gatgctcgac cgaatcatca ccgacctgct
      601 gcaaaaccaa aacccggatg gcggttgggg cgcgctacgc ggcaagcgca gcaacaccga
      661 agctacatcc ttagccgtcg ccgcgctgaa agcgctaacg gacaacgaac tggcggaaag
      721 ccgcaaacgc ggcgtcgctt ggttggtgcg acaacaaaac caagaccaaa gttggccact
      781 caacgaaacc gtcaaggagg gctcttggac gacggctcta gcgatcaccg cactcggcga
      841 tagtgcggag cacagcgagc gtgtgctcgc cgcggcgcgc tggctgctcg agcaagaggg
      901 cagcaaaccc ggcattctcg ctgagatcgt cctgtgggcc accggcaaat cgggcgccaa
      961 caaactcaac aaagatctca tcggctggtc ctgggtaccg agatcattta gctgggtgga
     1021 gccgaccagc tatgcgctga ttgcgctgaa aaaacagcgt ggtcgtcttg ccggcaccaa
     1081 cgtcgacgag cgcattcgcc aagctgacgc gatgatctac gatcgcatgt gcaccggcgg
     1141 cggttggaat tatggcaact ccaaggtttt agactacgcg ctttggccct acccggatat
     1201 caccgcgctg gcattgatcg ccatgcaaga tcatgcgaag gagaaagcca atcaagaaag
     1261 tctgcaagtc ctaagcaaga tcgccctcga aaccgattct ggctttggcc tctgttgggc
     1321 ggccatctgt ctgaaccttt acgggcaaga ccattcgcag tttcacaaac ggatcgaaaa
     1381 acgcttcgcc gccacggcat tcctcggcga aactaagacg ctcgctctgg cattgatcgc
     1441 gctgcggggc aagtccaatc cttttcacat ttaggatcaa acgatgcgtc gccgacaatt
     1501 tcttaaatac accgccatgg gctcgctcag cacgacgctg gccaattgcc aatcttccgg
     1561 gcgctggcag cctgaggcat ttcgcaagca agccgcctcg cgggtcgccg tcttgacggc
     1621 caagggatac gaccagccgc tcaaggacgt gatcctgaga ggtatcaaac tttgcggttt
     1681 gcaggtcacc ggaaaaagaa tcgtcctcaa accgaaccta gtcgaattcg accccaaagg
     1741 cgtgatcaat accaacccgg cggtcatcga ggcggccatc gatgcctttc gcactctcgg
     1801 cgccgccgaa gtaatcgtcg ccgaagggcc gggccatcgt cgcgacaacg aatatttgct
     1861 ctcggcctcg ggtctttacg atgtcatacg cgaacacaag gtccgctacg tcgatctcaa
     1921 ctccgacgac gtccgcgcca cagcggtgcg cagcagctat accagcttca aacaactgta
     1981 tctgccggaa acactgttca acgccgacct gctggtctcc atgcccaagt tgaagaccca
     2041 tcattgggcc ggcgtgacgc tgtcgatgaa aaacctgttc ggtatcattc ccgggaccgt
     2101 ctacggctgg ccgaaaaata ttctccactg gcaaggcatc gacaacagca tcttggatat
     2161 caacagctcc ctgccgctgc cgcagttcgc catcgtcgac ggcatcgtcg gcatggaagg
     2221 caacggcccg ttgcaaggcc gggccaaaaa cgccggtgtg ctgatcttcg gcgacgactt
     2281 cgtgtccgtc gacgccagcg cggcgcggct gatgaaactc gaaccgcgca aagtcattca
     2341 tctggccaag gccgatgcct ttctcggcaa cttggctgag gaaaaaatcg cgcaaatcgg
     2401 cgagaagttg gaaagtctgc agcaagactt cgagatcatc gaagatttaa aagacttgaa
     2461 aaaactaacc ggctgaagcc gggcctctga gtccatcgcg cgacgggtga cggcagagca
     2521 tcagttgcgc gcgacgatca atccacaggc ggcgcgatct ccggcgtttc ccgtcgggtc
     2581 ggtggcgtaa tcgtcgactc cggcgtgaac gaccagggcg ctgccatcgg cgtcaaagat
     2641 cgacagcggc ccggctctga gagtcactcc attggtgaac acttcgaaac ggcccatgcc
     2701 gtccttcgct accaacatat tgggcaaatc gccggcgtgg gcgccctccg gactgcgatg
     2761 gccatgtttc ctttgagccg gattaaaatg tccgccggcg ctggtaaacg cgggggcatc
     2821 gcatttgccg acagcatgga tatgcaccgc gtgcagtccg gcgctaagtc cttttacttc
     2881 caatcgcacc cgcacaccgc tgccggcttc gacaaacgac gccatcccga tggtcttgcc
     2941 atccttgtcc ttgagttcgg cggtcgcccg ttcgcctgag ccgactaatg agcagccggc
     3001 tcccaccgac aacgacaagg cgcaaaccgc aaagataaat ttccaggaat caggtttttt
     3061 tgaagatgag aaattttgca tgggaaaatc gttaccatcg atagactcgg ctcgcaacca
     3121 atgggtcaca acgaccggct atcttgcgtg gaggttatgc cgattacccg ccgattgcga
     3181 cgcatccggg cctatgctag ctttcggcgt tattcaccat gtctgcttta gcgatatatt
     3241 tgccgacggt ggttttcatc tctctgctcg gcggcttctt gccattgatg cgggcattgt
     3301 cccaacgcgc cctcgccctg ctgctcagtt ttagcgccgg tgtcctgctc ggcgcggtgt
     3361 tttttcacat gttgccggaa gtcggcaatg tgcttggcgc cgaccttggc ttgccggttt
     3421 tagccggttt cctgctgatc ttcgtcatgg aacgattcgt attcgtgcat gcctgcgagg
     3481 agcatgactg cgatatccat cagatgggcc ttccagcgtt
//
LOCUS       DATIRS010000885         1678 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1932745, whole genome shotgun sequence.
ACCESSION   DATIRS010000885 DATIRS010000000
VERSION     DATIRS010000885.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1678
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1932745"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            286..1398
                     /locus_tag="VLM90_11200"
     CDS             286..1398
                     /locus_tag="VLM90_11200"
                     /inference="COORDINATES: protein motif:HMM:NF012401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite oxidase"
                     /protein_id="HSQ13582.1"
                     /translation="MEQKSTNKYFPTVGDGSGLAQSDALHKEELQLALRNRGMPLEAL
                     RYPITPTGLHYLLIHYDIPAVDADGWRLKIAGQVATPLELTLEEIKKRPRQTIPVTME
                     CAGNGRALFAPRRISQPWLLEAIGTAEWTGTPLRTILQEAGVDGAAAEIVFTGLDRGF
                     EGDQVQHYQRSLTVEEATKTEVLLVYEMNGEPLPPQHGYPLRLVKPGWYGMASVKWLN
                     QIEAVAEPFQGYQMVRAYRYAQSADDPGEVVDVIRARALMIPPGIPDFMTRDRLVDAG
                     AVTLTGKAWAGNGGVSRVEVSVDGGATWSDAQLGESASPFAWRSWTFEWHATPGAHLL
                     QVRASDATGNVQPAVQQWNFGGYGNNGVQRVNVVVR"
BASE COUNT          390 a          481 c          491 g          316 t
ORIGIN      
        1 gagatgcaca acaaagagcc tgcggggttc cgtcataccc gcgaaagcgg gtatccaggc
       61 taactgggcg cagaccaaac ctggattccc gcgtgcgcgg gaatgacgag tcgaggaggg
      121 gagcatgttc tgggagtaca atccattttc ctgctctcta ggcgcgcgca agctcatgaa
      181 cgcttcgtgg tgcataaaac aagaacccgg cgcaccgcac aagcgcatga ataacaaatc
      241 attttgatcg cggtaaaagt aaaatccagc gacaggtcag cgcatatgga acaaaaaagc
      301 acgaataaat attttccaac ggttggcgac ggcagcggcc tggctcaatc cgatgcgctg
      361 cataaagagg agctgcagct cgcgctgcgc aatcgcggca tgccgctgga ggcgctgcgc
      421 tatccgatca cgccaaccgg cctgcactat ttgctgatcc attacgacat accggcggtg
      481 gacgccgacg gatggcgcct gaaaattgcc ggccaagtcg ctacccccct cgagctgact
      541 ctggaggaaa ttaaaaagcg cccgcgccaa accatcccgg tgaccatgga atgcgccggc
      601 aacggccggg cgttatttgc gccgcggcgc atcagccaac cgtggcttct cgaagccatc
      661 ggcaccgccg agtggaccgg cacgccgctt cgaaccatcc tgcaggaagc cggcgtcgac
      721 ggcgctgccg cggaaattgt ttttaccggt ttggatcgcg gcttcgaagg cgatcaggtg
      781 caacactacc agcgcagtct gaccgtcgaa gaagcgacca aaaccgaggt tttgctggtc
      841 tatgaaatga acggcgagcc gctgccgccg cagcatggct atccgctaag gctggtgaag
      901 ccgggctggt acggcatggc gagcgtgaaa tggctgaacc aaatcgaagc cgttgccgag
      961 ccgtttcaag gctatcaaat ggtgcgcgcc taccgttacg cgcagtcggc cgacgacccc
     1021 ggagaggtgg tcgacgtgat cagagcgcgc gccctgatga ttcctcccgg cattccggat
     1081 ttcatgaccc gcgaccggct cgtcgacgcc ggtgccgtga cgctcacggg caaagcgtgg
     1141 gcagggaatg gcggcgtgtc ccgtgtcgaa gtcagcgtcg acggcggcgc gacctggtcc
     1201 gatgcccaac tcggcgaatc ggcatcaccc tttgcctgga gatcatggac attcgaatgg
     1261 catgccacgc cgggcgctca cctgctccag gtgcgcgcga gcgatgccac cggcaacgtg
     1321 cagccggccg tgcagcagtg gaatttcggc ggctatggca acaacggcgt gcaacgcgta
     1381 aatgtcgtcg tgcgttaaca tcttttcacc ggtgtccgag aaaaaaaagc tcgaggcaag
     1441 ttctgcaatg agataaacca cctgatggga tgaaaaccga taccctccaa ccatgctaga
     1501 ttggtcatct tgtcccacgc tagatcgcta tttaagaacg gcttttcaac gggtattttg
     1561 aagggcgaga attttttttc tgaccgctaa tggaatgttg acaaatgcga attggtcctt
     1621 atgaaaaagg taatcctcgg cactctcatc aataatccgt acaagatcgt ccttagcg
//
LOCUS       DATIRS010000886         1610 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1148010, whole genome shotgun sequence.
ACCESSION   DATIRS010000886 DATIRS010000000
VERSION     DATIRS010000886.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1610)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1610)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1610
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1148010"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..828)
                     /locus_tag="VLM90_11205"
     CDS             complement(<1..828)
                     /locus_tag="VLM90_11205"
                     /inference="COORDINATES: protein motif:HMM:NF024912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HSQ13583.1"
                     /translation="MSDELDKFHDECAVMGIYGHPEAANMAYLGLYALQHRGQESCGI
                     VTSDGKGLISHRQMGLVADAFKEDVIKRLEGQNAIGHNRYSTQGQSHLKNAQPFVVEY
                     SQGPIAIAHNGNLVNGTLLRNELEQAGSIFQSTSDTEVIIHLIATSKEPTLMGRIVEA
                     LSRCRGAYSLQFLTLDKLIAARDPYGFRPLVLGRFPEGKNRGAYVFASETCALDLIEA
                     EYVRDVEPGEIVTIGADGLESLKPFPPVPHAKCIFEYIYFARPDSKLFGNNVYQVRKS
                     "
     gene            complement(877..>1610)
                     /locus_tag="VLM90_11210"
     CDS             complement(877..>1610)
                     /locus_tag="VLM90_11210"
                     /inference="COORDINATES: protein motif:HMM:NF014788.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AIR synthase-related protein"
                     /protein_id="HSQ13584.1"
                     /translation="DCLNFGSPENPEVMWQFAEVIHGMRDACLSLHVPVVSGNVSFYN
                     ETDGVPIHPTPTIGMVGLLEKVERFVTPWFKAAEDVVILLGRTREELGGSEYLKTIHG
                     LTRGTPPWIDLKLELAVQNCCIDAIEQGLLQSAHDVSDGGLAVALAECCIGGPDKPLG
                     VRVETHEMIRTDALLFSESQSRIIVSVKENNLERLQDLAEQHHVPLLALGAVGGSRLG
                     FQPLLHLPVEELRAIWSNGLTARLK"
BASE COUNT          347 a          469 c          461 g          333 t
ORIGIN      
        1 cgacttgcgc acttggtaaa cgttgttgcc gaagagtttg ctgtcgggac gagcaaagta
       61 aatatactcg aaaatacatt tggcatgggg caccgggggg aacggcttga gcgattccag
      121 accatcggcg ccgatggtga cgatctcgcc cggctcaacg tcgcggacat actccgcttc
      181 gatcagatcc aatgcacagg tctccgaagc gaacacatag gcgccgcgat ttttcccctc
      241 gggaaagcga cccagcacca gcggccgaaa gccgtaggga tcgcgcgccg cgatcagctt
      301 gtccagggtc aaaaattgca gcgagtaagc gccgcggcag cggctcagcg cttcgacgat
      361 ccgccccatc aaagtcggct ctttcgaagt ggcgatcaga tgaatgatca cttcggtgtc
      421 tgaggttgac tggaagatcg aacccgcctg ctcgagttcg ttgcgcagca atgtgccgtt
      481 aaccagattg ccgttatgcg cgatcgcaat cggcccctga gaatattcga cgacaaaggg
      541 ttgggcgttt ttgagatggc tctggccttg ggtggagtag cggttgtggc cgatggcgtt
      601 ttgcccttcg agtcgcttga tcacgtcctc tttgaaagcg tcggcgacta gccccatctg
      661 gcgatgagag atcagcccct tgccgtcgga ggtaacgatg ccgcaagatt cctggccgcg
      721 gtgctgcagc gcatagaggc ccaaataagc catgttggcc gcttcgggat ggccatagat
      781 gcccataacc gcgcactcgt catggaattt gtccaattca tcggacatcg ataatttccg
      841 cgatcccgcc ctagccgatt gaactctcga accaagctat ttgagccgtg ccgtaagccc
      901 attagaccag atcgcacgca attcttctac cggcaagtgt aaaagcggtt gaaaccccag
      961 ccggctaccg ccgacggcgc cgagcgccag cagcggcacg tgatgctgct cggcgagatc
     1021 ttgcaggcgc tcgagattat tttctttgac cgagacgata atgcgcgact gcgactcgct
     1081 gaacaaaagc gcgtcggtgc ggatcatttc atgggtctcg acgcgaacgc ccaagggctt
     1141 gtccggaccg ccgatgcagc actccgcgag cgccaccgcc aggccgccgt cggatacatc
     1201 atgggccgat tgcagaagcc cctgctcaat ggcgtcgatg cagcagtttt gcaccgccaa
     1261 ttccaacttg agatcgatcc agggcggcgt gccgcgggtt aggccatgaa tggttttcaa
     1321 atactcgctg ccgcccagtt cttcccgggt acggccgagc aatatgacga catcttcggc
     1381 agccttgaac caaggcgtga cgaagcgttc gactttttcc aataacccga ccatgccgat
     1441 ggttggcgtc ggatggatcg gcacaccgtc ggtttcattg tagaaactga cgttgccgct
     1501 caccaccggg acgtgcaacg ataaacaagc gtcgcgcatg ccgtgaatca cctcggcgaa
     1561 ttgccacatc acttcgggat tttccggact gccgaaattc aggcaatcgg
//
LOCUS       DATIRS010000887         2453 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1246238, whole genome shotgun sequence.
ACCESSION   DATIRS010000887 DATIRS010000000
VERSION     DATIRS010000887.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2453
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1246238"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            114..821
                     /locus_tag="VLM90_11215"
     CDS             114..821
                     /locus_tag="VLM90_11215"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HSQ13585.1"
                     /translation="MAQSNTRAKRSEKGLLTPDNCVVAIIDLQPQMLFGVANFDRQTI
                     INNNVALLKAAKVFDVPVVLSTVETKSFSGNMWPQIQAIFPNQTPIERSSMNSWDDKN
                     FVAAIEKSGKKKIVLSGLWTETCVALPTVQAIHDSYEVYVVEDCCGDVSQLSHDNAMK
                     RVIQAGAKPVTALSVMLEWQRDWAERDSYDAIMDIVKSHFGAYGVGVEYAYTMVHGAP
                     ATKFPEYVVPAAAAAHK"
     gene            934..>2453
                     /locus_tag="VLM90_11220"
     CDS             934..>2453
                     /locus_tag="VLM90_11220"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HSQ13586.1"
                     /translation="MATNNIEPELILINGRIATQDERRSFAQAVVVRDGRFVAVCSNE
                     EIMARRAAKSEIIDLGGRTAIPGLNDSHMHPIRGGLNYNMELRWDGVPSLADALRMLK
                     EQAARTLPPQWVRVVGGWTELQFAERRMPTLDEINRAAPDTPVFFLHLYDRAFLNGAA
                     LRAVGYTKNTPAPIGGEIQRDKQGNPTGLLIARPNASILYSTLARGPKLSREDQLNST
                     RHFMRELNRFGVTSAIDAGGGFQNYPDDYAVIDELHKRGEMTLRLAYNLFTQKPKDEL
                     ADFRQWTQLTKPGVGDDFYRVNGAGEMLVYSAADFEDFLEPRPDMPPAMESELKAVIR
                     HLVENRWPFRLHATYDETISRALNVYEEINRDIPFAGLHWFFDHCETISDRNIERIKA
                     LGGGIAIQHRMAFQGEYFVDRYGAKQAERTPPIRRMLEMDVPVGAGTDATRVASYNPF
                     VALYWLVTGKTVGGASLYPVTNRLERMEALRLFTVGSSWFSSDEGKKGSIAAGQLA"
BASE COUNT          528 a          710 c          751 g          464 t
ORIGIN      
        1 tcactaaggg aagcgtcgag gcaagggtcg cgccgagcaa gcaacgttaa taatttccaa
       61 tgggggatgc tcgggtctta atagtgttaa ttaactatct caaggagaaa tttatggctc
      121 aaagcaatac gcgcgcgaag cgcagtgaaa aaggactgct gacgccggac aactgcgtgg
      181 tggcgattat cgatctgcaa ccgcagatgc tcttcggcgt cgccaatttc gaccgtcaaa
      241 cgatcatcaa caacaacgtc gcgctcttga aagccgccaa ggttttcgac gtgcccgtcg
      301 ttctcagcac ggtggaaacc aagagtttca gcggcaatat gtggccgcag atccaggcga
      361 tctttcccaa tcagacgccc atcgagcgct cttcgatgaa ctcctgggac gataagaatt
      421 ttgtcgccgc catcgaaaag agcggcaaga aaaaaatcgt cctgtccgga ttgtggacgg
      481 aaacctgtgt cgcgctaccg acggtgcagg cgattcacga cagttatgag gtatacgtcg
      541 tcgaggactg ctgcggcgac gtcagccaat tatcgcacga caacgcgatg aagcgggtga
      601 tccaggccgg cgccaagccg gtgaccgcgc tttccgtcat gctcgagtgg cagcgcgatt
      661 gggcggagcg cgacagctat gacgcgatca tggacatcgt gaaaagccat tttggcgcct
      721 acggcgtggg cgtggagtat gcctacacga tggtgcacgg cgcgccggcg acgaagtttc
      781 ctgaatacgt cgtgccggcg gccgcggctg cacacaagta acggttgcga gcagggctgg
      841 cctgtgcgct tttccacgat ggcttactcg cgacggcagg ttcttaaact cgcggcactg
      901 acgggagccg cccaactgtt gggaggatgc agcatggcga caaataatat cgagccggag
      961 ttgatattga tcaatggccg aatcgccact caggacgagc gccgttcatt cgcccaggcc
     1021 gtcgttgtcc gggacgggcg gttcgtggcg gtttgttcca atgaagagat catggcccgt
     1081 cgcgccgcta agagcgaaat catcgatctt ggcggtcgga cggcgatccc aggtctcaac
     1141 gactcgcaca tgcatccgat ccgcggcggg ctcaactaca acatggagct gcgttgggac
     1201 ggcgtgccgt cgctggcgga cgcgctgcgc atgctcaagg agcaagccgc gcgcacgctg
     1261 ccgccgcagt gggtgcgtgt ggtcggcggc tggaccgagt tgcaattcgc cgagcggcgc
     1321 atgccgaccc tcgatgaaat caaccgagcg gcgcccgata cgccggtttt cttcctgcat
     1381 ctgtacgatc gcgctttcct aaatggcgcg gcgctgcgcg ccgtcggtta tacgaagaac
     1441 acgcctgcgc cgatcggcgg cgagattcaa cgcgacaagc aaggcaatcc cacaggcttg
     1501 ctgattgcca gaccgaacgc gagcatcctt tactcgacgt tggcccgggg accgaagctt
     1561 tcgcgtgaag accaactgaa ctcgacgcgc cacttcatgc gcgagctcaa ccgcttcggc
     1621 gtcaccagcg ccatcgacgc cggcggcggc tttcagaatt atccggacga ctacgcagtc
     1681 atcgatgaac tgcacaagcg cggcgaaatg acgctgcgtt tggcctacaa cctgttcacg
     1741 caaaagccga aggatgagtt ggcggacttt cgccagtgga ctcagctgac aaaacccggc
     1801 gtgggcgatg atttttaccg ggtcaacggc gcaggcgaaa tgctggtcta ttcggcggcg
     1861 gatttcgagg actttctcga accgcgcccc gatatgccgc cggcaatgga atcggagctc
     1921 aaggcggtca tccgccacct ggtcgagaat cgttggccgt tccgcctgca tgcgacttac
     1981 gacgagacga tcagccgcgc gctcaacgtc tatgaagaaa tcaatcgcga catcccattc
     2041 gcaggcctgc actggttctt cgatcattgt gaaacgatct cggaccgcaa catcgaacgc
     2101 atcaaagcgc tcggcggcgg catcgcgatc caacaccgca tggcgtttca aggcgagtac
     2161 ttcgtcgacc gctacggcgc caagcaagcc gagcggacac cgccgattcg ccggatgttg
     2221 gagatggacg tgccagtggg agcgggaacc gatgcgacgc gggtcgcgag ctacaatcct
     2281 tttgtggcgc tttactggtt ggtcacgggg aagaccgtcg gcggcgcctc gctctatccg
     2341 gtaaccaacc gtctcgaacg catggaagcg ctccggctgt ttacagtggg cagcagttgg
     2401 ttttccagcg acgaaggcaa gaagggctcg attgccgccg gccaattggc cga
//
LOCUS       DATIRS010000888         3552 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_65167, whole genome shotgun sequence.
ACCESSION   DATIRS010000888 DATIRS010000000
VERSION     DATIRS010000888.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3552
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65167"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            90..2999
                     /locus_tag="VLM90_11225"
     CDS             90..2999
                     /locus_tag="VLM90_11225"
                     /inference="COORDINATES: protein motif:HMM:NF014763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HSQ13587.1"
                     /translation="MVFVVLLGGGLIISGALELYFRYSESRQQIAVVQGEIASNAARR
                     IAQFILTIEEHMKAATVSSVVARQGIGPAYQFELAKLLMIAPAISELLAIGADGRVRA
                     FVSRFRVEPNTDEQNLSKAASFLQAKQGVTFFGPVNFVDESEPSIAIAVPVEQFPGHV
                     IGTLQAQVDLRQIWEVVRDLKFSDTGYAYVVNRAGDLIAHSNPGLVLQRLRAAHLTQV
                     RTAFQPNPVAPIPRTAMAKDFAGKDVLSSFVFLPNLDWAVFVEQPLSEAHKSLYGSIL
                     RTSTLLLIGLATALVASVFVARRVVRPLEALRRGVERIGTGDLNHRIEIETGNEIEVL
                     ADEFNKMVDEIKNAYQGLEDKVQQRTKELTALLDVAATATQSFDIDVVLRQVAEKISE
                     IFELYAVLIYLYEPNQTDLRVRALTGYAPQGFAQRLFKRGQGIVGRVAETGEPLLFAD
                     AQSDPAYLAASQSHAAKELGIHFIAGFPIKSKGRVLGAIVCNGRSPRQLTEPERRLLT
                     SMADQIGPAIDNVNLFEEAKSKSAELERRNREVVDALERQTAVAEMLRAMAHTLSDLQ
                     SFFDAMIADTVRLTRAAGGVIRLADNTGALRYVAHYRNGVHRLCDVEQQPLPADENGA
                     AMQAYRQQSPVQFNDVLEQPPPLRGPISTATRTVLAVPLLQEGVSIGVIVVFRHFVEP
                     FTEPQVELVTTFADQAVVAIKNINLFQELEARRRELESANERLKELDKLKSGFVSNVS
                     HELRTPLTAIGSLVDNMLDGLTGPLSAKQARYMSGIKDSTERLARLIHDLLDLSVIES
                     GRMEIKPSTFQLSSLITEVVENLRPMARDKAIELDGGSPNHGHLAWADRDKVTQVLTN
                     LVTNAVKFTPNGGKFRIFLESVESGYWLQVGVSDNGPGIPPEDAGRIFDEFYQISHPG
                     REKAKGVGLGLAICKKLIDMHGGQIRVESTTGAGSTFYFTVPAHVEQSSVQAALN"
     gene            3011..>3552
                     /locus_tag="VLM90_11230"
     CDS             3011..>3552
                     /locus_tag="VLM90_11230"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSQ13588.1"
                     /translation="MTEPQETILVVDDDPYIQEALKDRLESLGYRVMQATDGNQALEK
                     IGQQTPQMAFLDIEMPGMKGMEVLKELRRQEKDFPVVMITAYGTIDIAVEAMKDGAAD
                     FVAKPFKGSHIAMVVRRTMEQQRLRRGIEVLTQEVDKRYQMVFGKSEKINQVINAAKK
                     AAATRSTVLLLGESGVGKEL"
BASE COUNT          802 a         1059 c         1008 g          683 t
ORIGIN      
        1 cgatgacctc caaaagaata cccaatcgac aagcggcccc gcagaccaaa atccaaaatc
       61 attctggccg cctggcacga cagtatttta tggtctttgt cgtgctgctc ggcggcggtt
      121 tgatcatcag cggcgccctc gaactctact tccgctatag cgaaagtcgc caacagatcg
      181 ccgtggtgca aggcgagatc gccagtaacg cggcgcggcg catcgcccaa ttcattctca
      241 ccatcgaaga acacatgaag gcagcgaccg taagcagcgt cgtcgcgcgc cagggcatcg
      301 gtccggcgta tcagttcgag ctggccaaac tgcttatgat cgcgccagcc attagcgaac
      361 tgctcgccat tggcgccgac ggccgggtgc gggctttcgt ctcgcgcttt agggtcgagc
      421 caaacaccga tgaacagaac ctctccaagg ctgcgagctt cctccaggcc aagcagggcg
      481 tcactttttt tggtccggtc aacttcgtcg atgaatctga gccatcgatc gccattgcgg
      541 tgcccgttga acaatttccc ggccatgtca tcggcacact gcaagctcaa gtcgacttgc
      601 gccagatctg ggaagttgtg cgcgatctca agttcagcga taccggttac gcctatgtgg
      661 tgaaccgcgc cggcgatctg atcgcccatt ccaatcccgg tttagtttta cagcgcttac
      721 gcgcggcgca tttgacccag gtacggaccg cgtttcaacc caacccggtg gcgcccatac
      781 cgaggacggc catggccaag gactttgccg ggaaggatgt gttgagctct tttgtcttcc
      841 tccccaacct tgattgggcc gtcttcgtcg agcagccgct tagcgaggcg cacaagagct
      901 tgtatgggtc gattctacgc acctccaccc tcttgcttat cggtttggcc acggccctgg
      961 tcgccagcgt cttcgtcgcc cggcgcgtgg tccgcccgtt ggaagctctg cgccgcggcg
     1021 tcgaaagaat cggtaccggc gacttgaacc accgtattga aatcgaaacc ggcaatgaga
     1081 tcgaagtgct cgccgatgaa ttcaacaaga tggtcgatga aatcaaaaac gcctatcaag
     1141 gacttgaaga taaagtgcag cagcgcacca aagaactgac ggcgcttctc gatgtcgccg
     1201 cgaccgcgac tcagtccttc gacatcgacg tggtattgcg ccaagtggcg gagaaaatct
     1261 ctgagatctt cgaactctat gcggtactca tctacctcta tgaacccaac caaacggatc
     1321 tgcgggtgcg cgctctgacc ggctacgcgc cccaaggatt cgcgcaaaga ctgttcaagc
     1381 gcggccaagg aattgtcggt agggtcgccg aaaccgggga gcccctgctg ttcgccgatg
     1441 cgcaaagcga tccagcctac ttggcagcga gccagagcca cgcggcgaaa gaattgggca
     1501 ttcatttcat cgcgggcttt ccgatcaaat cgaagggacg ggtgttgggc gcgattgtct
     1561 gcaatggccg gtcgccgcgc caattgacgg aaccagagcg ccggctgctc acttccatgg
     1621 cggatcagat cggcccggcc atcgacaacg ttaacctgtt tgaagaagca aaaagtaaaa
     1681 gcgcagagct cgaacggcgc aatcgcgaag tggtcgatgc cctggagcgt caaaccgcgg
     1741 tggccgaaat gctgcgcgcc atggcgcata ccctgagcga cttacaaagt tttttcgatg
     1801 ccatgatcgc cgacaccgtc aggctgactc gggccgccgg cggtgtcatt cgcctggcgg
     1861 acaacaccgg cgcgctacgc tatgtcgccc actatcgcaa tggtgtgcat cgcctgtgcg
     1921 acgtcgagca gcagccgcta ccggccgacg agaacggcgc ggcgatgcag gcgtatcgcc
     1981 aacagagccc ggtgcagttt aacgatgtct tggaacaacc gccgccgttg cgcgggccga
     2041 tatcaaccgc cacgcgcacc gtgctggcgg tgccactgct ccaagagggc gtttccatcg
     2101 gcgtcatcgt ggtctttcgc cacttcgtcg agccgttcac cgagccgcaa gtggaactgg
     2161 tcaccacctt tgccgaccaa gccgtggtcg cgatcaaaaa catcaacctg tttcaggaac
     2221 ttgaggcgcg caggcgggag ctggagtcgg ccaacgagcg cctcaaagag ctcgacaaac
     2281 tcaaatccgg ttttgtctcg aatgtctccc acgagctcag aaccccgctc accgccatcg
     2341 gcagcttggt cgacaatatg ctcgacggtc taaccgggcc gctcagcgcc aagcaagcgc
     2401 gctacatgag cgggatcaag gacagcaccg aaaggctggc gcggctgatt cacgatctgc
     2461 tcgatctctc ggtcatcgaa tcgggccgca tggagatcaa acccagcaca tttcaattat
     2521 cgtcgctgat aaccgaggta gtcgagaatc ttcggccgat ggctcgggac aaggctatcg
     2581 aactggacgg cggttcgcct aatcacggtc atctggcctg ggccgatcgt gacaaggtca
     2641 ctcaagtgct caccaattta gtgaccaacg ccgtcaaatt cacgcccaat ggcggcaaat
     2701 tcagaatttt tctcgaatcc gtcgagagcg gttactggct ccaggtcggc gtaagcgata
     2761 acggtccggg cattccgccc gaagacgcgg gcagaatctt cgacgagttc taccaaatca
     2821 gccatcccgg gcgggaaaag gccaaagggg ttggcctcgg tttggccata tgtaaaaaat
     2881 tgatcgacat gcatggcggc cagatccgcg tggagagcac caccggcgcc ggcagcacgt
     2941 tttatttcac cgttcctgcg catgtcgaac agtcgtcagt acaagctgcg ctgaattgag
     3001 gtctgtccct atgactgaac cgcaagaaac cattctagtc gtcgacgacg atccctacat
     3061 ccaggaagcg ctcaaagacc ggctggaatc cctcggctat cgggtcatgc aagccaccga
     3121 tggcaaccag gctttagaga agatcggcca acaaacgccg cagatggctt tcctcgacat
     3181 cgagatgccg ggaatgaagg gcatggaagt tctcaaagag ctgcgccgcc aggagaaaga
     3241 ttttccggtg gtcatgatca ccgcctacgg caccatcgac atcgccgtcg aggcgatgaa
     3301 agatggcgcc gcggattttg tcgccaaacc gtttaaagga agccatatcg cgatggtggt
     3361 gcgacgcacg atggagcaac agcgcttgcg ccgcggcatt gaagtgctga cccaagaggt
     3421 cgacaaacgg taccaaatgg ttttcggcaa aagcgagaag atcaatcaag tgatcaacgc
     3481 cgctaaaaaa gcagcggcga cccgcagcac agtcctgctg ctcggcgaaa gcggcgtcgg
     3541 caaggagttg tt
//
LOCUS       DATIRS010000889         2756 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1344260, whole genome shotgun sequence.
ACCESSION   DATIRS010000889 DATIRS010000000
VERSION     DATIRS010000889.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2756
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1344260"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..572
                     /locus_tag="VLM90_11235"
     CDS             <1..572
                     /locus_tag="VLM90_11235"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13589.1"
                     /translation="ERSLAESYFFPVYEAANRLGMAICIHTGAGAPEITKVFDRSFSH
                     NLPHVRSLPLFAFRDLVAHKIPERFPELRFGFIEASASWVPYVLHHLQRSSGAKLNAG
                     GDADAAMEWGPKLFRDYRLYVAAEADEDLAYLLTHIGEDHMIMGSDYGHQDQSKEDGM
                     VGVMRRKKSISPAVIEKILCDNPRRFYGL"
     gene            1135..2082
                     /locus_tag="VLM90_11240"
     CDS             1135..2082
                     /locus_tag="VLM90_11240"
                     /inference="COORDINATES: protein motif:HMM:NF018024.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1028 domain-containing protein"
                     /protein_id="HSQ13590.1"
                     /translation="MALTAATAEETPTRQYAPADSTFSIISVEKDTGLLGLGVQSKAL
                     SIGNRVVTGKGGVAIVAHQSSSNPMYGKLVIDGIERGMTPQQALEFALRADKEPDRRQ
                     VAVIDIQGRSAAWSSKTIPDWTGHKCTPVYCVQGNTLANGNVIEEMGKAFEATKGPLA
                     ERLLAALDAGQAAGGDRRGMQGAMLKIVKPLVRADYDDTLLDIRVDDHKQPLVELRRI
                     LGVTRGFEMIGRIGPLIEKNDLRGAMALAESALKASPEDDLALVAMADISLRQGNKAA
                     ALIAIERAIASNPAQKGQLKRNKSFASLFDDAEFQRLTK"
     gene            2418..2663
                     /locus_tag="VLM90_11245"
     CDS             2418..2663
                     /locus_tag="VLM90_11245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13591.1"
                     /translation="MSKNVSGVDTGISRPYPANEVKATPNEPFIGADNMIMGSDYGHQ
                     DQSKEDGMVGVMRRKKSIAPAVIEKILCDNPRRFYGL"
BASE COUNT          602 a          820 c          820 g          514 t
ORIGIN      
        1 gggagcgctc tctggctgag tcctattttt ttccggtgta cgaggccgcc aaccggttgg
       61 gtatggccat ttgtattcac accggcgccg gtgcgccgga aatcactaaa gtctttgacc
      121 gcagcttcag ccacaacttg ccgcacgtac gctcgctgcc gctgttcgcc tttcgcgacc
      181 tcgtggctca caaaattccc gaacgcttcc cggaactgcg gtttggcttc atcgaggcgt
      241 cggcctcctg ggtgccctac gtgctgcacc acctccaacg atccagcggc gcaaaactca
      301 acgctggcgg cgacgccgat gcagccatgg agtggggccc gaagctattc cgagactacc
      361 ggctctacgt tgccgccgag gcggacgaag acctggccta tctcctgact catattggcg
      421 aggaccacat gatcatgggc tcggattacg gccaccagga tcaatccaaa gaagacggta
      481 tggtgggtgt gatgcggcgc aagaaaagca tatcgccggc ggtgatcgaa aaaattctct
      541 gcgacaaccc gcgccgcttc tacgggctgt agcggcgaac tgtctttttg caaccgcgct
      601 acgtctggga aggcgtggcg atgatgaaat taacaaacac tgacaatatg attctgaggc
      661 tgttggtctc gtttgagtaa agaaagtctg gtcataaaag tctgctccct ggctctgccg
      721 cttggctcgc aggctcgacc cgaagttgcg ccgtcaattc gtttccgctc ccgcagagcg
      781 tgccagcgag actttgaccg atcacatgtc tgccgatgga aagccagcgc gcatgagctg
      841 ggcgctaccc cttcaacggt tcttcgatat tgatgttgaa cgttgcccca actgcggcga
      901 cgatttgaag atcatcgcct gtcctgagca acgtcgaagg gccgccatcg atgacccgcc
      961 ggtgatcgac cggtacaaaa gcgagttttt cagcgcaaag aaaaggaatt gacagctctc
     1021 gcggttctac gatagcagtc tggtcataga aaaaggcggt ttattctcac ttaatatata
     1081 gccagggggc aaccgatgcg aaggacagcg atggcagcaa ttgcagcatc tggaatggcg
     1141 ctgacggccg cgactgccga agagacgccc acccggcagt acgcgcccgc ggacagcaca
     1201 ttctcaatca tctccgtgga gaaggacacg ggcctgctcg gcctcggcgt gcagtccaag
     1261 gccctgtcga tcggcaaccg cgtcgtcact ggcaaaggcg gcgttgctat tgtcgcgcat
     1321 cagtcgtcct ccaacccgat gtacggcaag ctcgtcatcg acggcatcga gcgcgggatg
     1381 acgccgcagc aggcgctcga gttcgcgctg cgcgccgaca aggagcccga ccgccgccag
     1441 gtcgccgtca tagacatcca gggccgcagc gccgcgtggt cgagcaagac gatccccgac
     1501 tggaccggcc acaagtgcac gccggtctac tgcgtgcagg gcaacacgct ggccaatggc
     1561 aacgtgatcg aggagatggg caaggccttc gaggccacga aggggccctt ggcggagcgc
     1621 ctgttggctg ccctcgatgc cggccaggcc gcgggcggcg accgccgcgg catgcagggc
     1681 gcgatgctca agatcgtcaa gccactggtt cgcgccgatt acgacgacac gctgctcgac
     1741 atccgcgtcg acgaccacaa gcagccgctc gtcgagctgc gtcgcatcct gggtgtcacg
     1801 cgtggcttcg agatgattgg ccggattggc ccgctgatcg agaagaacga tctcagaggc
     1861 gccatggcac tcgccgagag cgcactcaag gcctcgcccg aggacgatct ggcactggtg
     1921 gcaatggccg acatcagcct gcgccagggc aacaaggcgg cggcactgat agcgatcgag
     1981 cgcgccatcg cctccaaccc cgcgcagaag ggccagttaa agcgcaacaa gtcctttgcc
     2041 tcgctctttg acgacgccga gttccagcgc ctcaccaagt gacttcaatc caccactcac
     2101 tactctccac tcatcaggat ccaatggcgg acctcaagaa aatccgcacc gacgtcgccg
     2161 ccagcttggc gcgtcccgcc agcacagaaa aggggtctgg agtctgtgtg ctacgaacct
     2221 aactgtcgta gcagcggtgg tagcggcgct ttaaccatga tgaggttagg tcccgcgaaa
     2281 tcggcgtgca ggtgcgattt caaaccgagg caagcggcgt tgatcaagag tcttcgtcgt
     2341 cagcgttgcc acaaacggcg gaaagtattc cgtcaggtga gaatcaagaa gacgaacgca
     2401 agtgaaccgc tgatgaagtg tctaagaacg taagcggcgt cgacaccggg atatcgagac
     2461 cctatcccgc gaatgaggtg aaggcgaccc ctaacgaacc tttcatcggc gcagacaaca
     2521 tgatcatggg gtcggattac ggccaccagg atcaatccaa agaagatggc atggtgggtg
     2581 tgatgcggcg caagaaaagc atagcgccgg cggtgatcga aaaaattctc tgcgacaacc
     2641 cgcgtcgctt ctacggactt taacggggga taacgacgct gaccaccttg gcggactttc
     2701 ggcaattagc gggtgttagg ctttggttgc ctggagttta tgacgcctta caatgt
//
LOCUS       DATIRS010000890         2355 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_754733, whole genome shotgun sequence.
ACCESSION   DATIRS010000890 DATIRS010000000
VERSION     DATIRS010000890.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2355)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2355)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2355
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_754733"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            105..>2355
                     /locus_tag="VLM90_11250"
     CDS             105..>2355
                     /locus_tag="VLM90_11250"
                     /inference="COORDINATES: protein motif:HMM:NF012873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="condensation domain-containing protein"
                     /protein_id="HSQ13592.1"
                     /translation="MEFLGRTDNQVKLRGYRIELGEIESVLRLHPAVRDALVVAGATG
                     GEGESELVAYLVPQDGVTLAENDLRGYLSGKLPNCMVPAVFISLPALPLTPNGKVDRR
                     ALPAPDGPRVSAAREFIEPRDEIEELVAQVWREVLKLDRLGAQENFFQLGGHSLLATR
                     VVARLRGHFNVDLALRKIFERPTVTGLAEEIAILRRNQSGTGVMPMTRIASGGKLPLS
                     FSQRRLWFLQKLDGDLAAYHIPALFRIAGDLDVAALAQALNLVTARHEALRTGIREIG
                     GEPCQEIVAQLTFALPITDLSGLPNDQAESEWRRLATLVHLTAYDLARAPLWRAQLVK
                     LAEQEHLLILNFHHLIADGASLAIFYRELASSYEVYRRKEIASFAPLPLSYADYAGWQ
                     QQWLASPACAAELDYWKRNLAGLAAPASMPTDFPRPAARSYRGARLVRRLPVELSGAL
                     NRFTRQQSVTSFMILLAALSVLLARIGGQTDVVIGSTVAGRNHAAMEGVIGFFVNALP
                     LRLQLGDNPTFIGLLRRVREVCLGAYSNQDLPFEKLVEQINPVRTPSRNPLFDILFNV
                     ADLSERKFSLAGCNIDKIMASAPSAKFDLVLSAPEIAGSVELTVDYNVELYRPERIGA
                     VLEQFELILAQALRCPELAIEEHSLVGETARGLLPDPTALLDDRWEGAIHELVAAQGR
                     HGPAKTALVQGGESWSYAELDQAAGRFSSALRAGGVMPKDVVAIYAARDASLVVALLG
                     ILQTGASFLI"
BASE COUNT          415 a          678 c          748 g          514 t
ORIGIN      
        1 cggacttgac cgcggaacgc tttatcgcga atccctttag ccgtgaaccc ggtgcacgga
       61 tttatcgcac tggagacctg gctcggcatc ggatcgacgg caccgtggag ttccttggcc
      121 gcaccgacaa ccaggtgaag ctgcgcggtt accgcatcga attgggcgag attgagagcg
      181 ttctccgact ccatccagcg gtgcgggatg cgttggtcgt cgccggggcc accggcggcg
      241 agggcgagag tgagttggtc gcttacttgg tgcctcaaga cggcgtgaca ttggcggaaa
      301 atgatttgcg tggctacctc agcggcaagt tgcccaactg catggtgccg gctgttttca
      361 tctctttacc agccttgccg ctgacgccca acggcaaggt cgaccgccgg gcattgcctg
      421 ctccggatgg accgcgagtc agcgcggcac gtgagtttat cgagccgcgc gacgagatcg
      481 aagagctggt ggcgcaggtt tggcgcgagg tgttgaaact cgaccggctc ggcgcgcagg
      541 aaaacttttt ccagctgggc ggccattcgt tgctggcgac ccgcgtggtg gcgcgcttgc
      601 gcggccactt taacgtcgat ctggcgctgc ggaaaatctt tgaacggccc accgtcaccg
      661 ggctcgccga ggaaattgcc atattgcgcc gtaatcagag cggcaccggc gtgatgccga
      721 tgacgcgaat cgcgagtggc ggcaaattgc cgctgtcatt ttcccagcgc cgtttgtggt
      781 tcttgcaaaa acttgacggt gatctcgctg cttaccatat accggcgcta tttcgcatcg
      841 ccggcgatct cgacgttgcc gcattggcgc aggcgttgaa tctggtcact gcgcgccacg
      901 aggcgctgcg caccggcatt agagaaattg gcggcgaacc ctgccaggaa attgtcgcgc
      961 agttaacgtt tgcgctgcca atcaccgatt tgtccggttt gccgaatgac caagctgaat
     1021 cggaatggcg ccggctggca accctggttc accttacggc ctatgatttg gcgcgggcgc
     1081 cgctgtggcg cgcccaatta gtcaagttgg ccgagcaaga gcatctgctg atcttgaatt
     1141 tccatcacct catcgccgat ggcgcttcgc tggcgatctt ttatcgcgaa cttgcatcaa
     1201 gctatgaggt ctatcgccgc aaggagatcg cgtctttcgc gccattgcca ttgtcctatg
     1261 ccgactacgc cggttggcag cagcagtggc tagcctcacc ggcctgtgct gccgagctgg
     1321 attactggaa gcgtaatctc gccggtttgg cggcgccggc atcgatgccg acggattttc
     1381 cccgtccggc ggcgcgcagc taccgcggcg ccagattggt acggcggctg cctgtggaac
     1441 tcagtggggc gctgaaccgt ttcacccgcc agcagagcgt gacttcgttc atgattttgc
     1501 ttgcggcgtt aagcgttttg cttgcgcgga tcggcggcca gacggatgtt gttattggat
     1561 ccaccgtcgc cggccgcaac catgcggcga tggagggggt gatcggtttc tttgtcaacg
     1621 ccttgccgct tcggcttcaa cttggcgaca atccgacttt cattggcttg ctgcgccgag
     1681 ttcgcgaagt ttgcttgggc gcgtacagca atcaggactt gcccttcgag aaattggtcg
     1741 aacagatcaa tccggtgcgc actcccagcc gtaatccgct gttcgatatt ctcttcaatg
     1801 tcgctgacct gtcggagcgc aagttttcgc tggctggctg caatatcgac aagatcatgg
     1861 caagcgcccc cagcgccaaa ttcgacttgg tgctgtcggc gccggaaatc gccggcagcg
     1921 tggaactcac ggtggattac aatgtcgaac tataccgccc ggagcggatc ggtgccgtgc
     1981 tcgaacaatt cgaactgatc ctcgcgcaag cgctgcgctg tcctgagctg gcgattgagg
     2041 agcattcact ggttggcgaa acggcgcgag ggttgctgcc cgatccgacg gcgctactcg
     2101 atgaccgctg ggagggggcg atccatgaac ttgtcgccgc gcaagggcgc catgggccgg
     2161 caaaaactgc gctagttcag ggcggtgaga gttggagcta cgccgagctt gatcaggcgg
     2221 ccggacggtt tagcagcgcg ctcagagcgg gcggcgtaat gccgaaggac gtggtggcga
     2281 tctacgctgc gcgcgatgcg tcgttggtcg ttgccctgtt gggaatcctg caaaccggcg
     2341 caagcttttt gattc
//
LOCUS       DATIRS010000891         1792 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_361006, whole genome shotgun sequence.
ACCESSION   DATIRS010000891 DATIRS010000000
VERSION     DATIRS010000891.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1792
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_361006"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            457..609
                     /locus_tag="VLM90_11255"
     CDS             457..609
                     /locus_tag="VLM90_11255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13593.1"
                     /translation="MKTNSFLLALAASAVVIAATGYAAEDNHGKQMYLRYCGSCPAAL
                     TGVSFY"
     gene            689..1507
                     /locus_tag="VLM90_11260"
     CDS             689..1507
                     /locus_tag="VLM90_11260"
                     /inference="COORDINATES: protein motif:HMM:NF013397.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015499 - formate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015724 - formate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HSQ13594.1"
                     /translation="MAEIFGFDAYAPKEVAERVETVGVAKARLPLLSQIALGVLAGGF
                     IGLGALYFTLVTSDATLSFAVSRVLGGVAFSLGLVLVVVAGAELFTGNNLLVMAWASR
                     RLSTNELLRNWLVVFFANFAGALGLVGLVYLSNHWQMNGGAVGIQAVKIAAAKAALPF
                     AEAFFKGLLCNILVCLAIWLALAGRSIVDRLCAIVFPISAFVAAGFEHSIANMYFIPL
                     GILLKDHVQAGGAEQLSWTGLWWNLAPVTLGNIAGGGLMVGLVYYLIYRRSPEP"
     gene            complement(1566..>1792)
                     /locus_tag="VLM90_11265"
     CDS             complement(1566..>1792)
                     /locus_tag="VLM90_11265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13595.1"
                     /translation="QKQQIPLLAIHCLVSDDIAQERLAQRGSVGTDVSDGRWEIYEQQ
                     KDVFEALDDIPAAARLELDTDATLDTLAVA"
BASE COUNT          341 a          531 c          489 g          431 t
ORIGIN      
        1 gtgtccggca cacttgggac agcacagatc gattgcagtt ttctcgactt tctgcagctt
       61 cgctttgagc tttgccatca gttcacggtc gcgctcggcg aaatagatgt cttcctttgc
      121 ccgctcgacc agcttcatgg gttcgccgta gcgatccttg tcgtccgtca tgactgcacc
      181 tccaatcgat cttactggta tgctgagcag attcggtgcc agaccggcgt aagagttccc
      241 tcaagcgacg ctaggtatta tcgcagtcta gttaaccggt gagttcggac gcatagaata
      301 attcgcgaac tcgcgaaacc agccgggtgc ctctctcaag aatgacaaga tcaagataga
      361 atcgcccatc gacaggtgac aaaaccaggg cattcgtttt gcgtagatga gaaattagga
      421 ttgccactgc gccgacaaat ggtgatagga gccggcatga aaacaaattc ttttttgctt
      481 gcgctggcgg cttctgccgt tgtaatcgcg gcaactggat atgccgccga ggacaatcac
      541 ggcaaacaaa tgtatctgcg ctattgcggc tcttgtcctg ctgcgctgac aggtgtgagt
      601 ttctactgaa tacgacgagt gcctgccgcg accaacagac cctggcgccg cactacaaaa
      661 ttgacgcgca acgaatcgag aaactgtaat ggcggaaatc ttcggcttcg atgcctacgc
      721 ccccaaagag gtcgccgagc gggttgagac cgtcggcgtc gccaaagcgc gcttgccgct
      781 gctttcgcag atcgccctcg gcgtcctcgc cggcggcttc atcggtctcg gcgcgctcta
      841 tttcacgctc gtcaccagcg atgcgactct cagcttcgcc gtcagccgcg tactcggcgg
      901 cgtggccttt tcgcttggac tggtcttggt ggtcgtcgcc ggagccgaac tcttcaccgg
      961 caacaatttg cttgtcatgg cctgggcaag ccgtcggctc tcgaccaacg aactgctgcg
     1021 caactggctg gtcgtctttt tcgccaattt cgccggcgca ctcggcctcg tcggactggt
     1081 ctatttatcg aatcactggc agatgaacgg cggcgcggtg ggaatccaag cggtcaagat
     1141 cgccgcggcc aaagccgcgc tgccttttgc cgaggcgttc tttaagggcc tgttgtgcaa
     1201 cattctcgtt tgcttggcta tttggctcgc cctcgccggc cgcagcatcg tcgataggct
     1261 ctgcgccatc gtttttccga tctccgcctt cgttgccgcc ggcttcgaac atagcatcgc
     1321 caacatgtac ttcattcctc tcggcatctt gctcaaggac catgtccagg caggcggcgc
     1381 cgaacaattg tcatggaccg gactttggtg gaatctcgcc ccggtcaccc tcggcaatat
     1441 cgccggtggc ggcctgatgg tcgggttggt ctattatcta atctaccgcc gttcgcctga
     1501 accttgatgg ggaatcgcgc ttgcgatcat caatggcgag ggagccttgt gcgcaggaat
     1561 ttttctcagg caaccgccag cgtgtcgagg gttgcatcgg tatccagctc cagacgggca
     1621 gccgctggga tatcgtccag cgcttcgaag acatcctttt gttgttcata gatttcccag
     1681 cggccatccg acacatccgt ccctacgctc ccccgttgag ccaatcgttc ttgagcaata
     1741 tcatctgaga ccaggcagtg aatcgccagc aagggaatct gctgcttttg cg
//
LOCUS       DATIRS010000892         2082 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1933209, whole genome shotgun sequence.
ACCESSION   DATIRS010000892 DATIRS010000000
VERSION     DATIRS010000892.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2082
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1933209"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..786
                     /locus_tag="VLM90_11270"
     CDS             <1..786
                     /locus_tag="VLM90_11270"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HSQ13596.1"
                     /translation="ESELRAGKAVCVIGPTVGKELFGAQDPMGNKLRLKNVSCEVIGQ
                     LKSKGQSVMGRDQDDLIIMPLRTFQRRIAGNRDISQIQLSVRDESAIDRVKSAIERLM
                     RERRHLAPNEENDFSVMDTRQIAQTLTGTTRILTLLLSAVAAVSLLVGGIGIMNIMLV
                     SVTERTREIGIRLAIGAFERDVLTQFLVEAMVLASFGGLFGVLLALAASAVLAQVLQV
                     PLILNPGIMILAFLFSGAVGVIFGYVPARRAAQLDPIEALRHE"
     gene            902..>2082
                     /locus_tag="VLM90_11275"
     CDS             902..>2082
                     /locus_tag="VLM90_11275"
                     /inference="COORDINATES: protein motif:HMM:TIGR01845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HSQ13597.1"
                     /translation="MGPDYKAPDIVAPAQWNPSLRGGLIATEPEAQSLTEWWTTLGDT
                     DLSALMERAVTGNLDLKLAQARIREARARRGIAEAGLFPSLNLGGSATVSRGSEDTGS
                     GMRRELYRTGFDASWEVDVFGGVRRSVEAAQGELEASAADYQDVLVSLVAEVALNYVE
                     ARTFQTQLQVAEENLKAQAETLQLTEWRFAAGLVSSLDVEQAKTNLESTRSQLPRLRT
                     NIEAAKNRLAILLGVFPGGLEAQLTARKPIPEAPAEVAVGVPAEALRRRPDVRRAERQ
                     LAAQTARIGVATADLYPKFTLPGTIGLEALAANHLFSAANRAWSLVGSFAWTVFKGGA
                     IRQNIEVQSALQEQALNQYEATILTALEEVENSLVGYAEEQERRDTLAAATQAAQRAA
                     EL"
BASE COUNT          422 a          582 c          666 g          412 t
ORIGIN      
        1 gaaagcgagc tgcgcgcggg caaagcggta tgcgtcatcg gccccactgt gggtaaagaa
       61 ctattcggcg cccaagatcc aatgggcaac aaacttcgtc tcaagaacgt ctcttgcgaa
      121 gtcatcgggc aattgaaatc gaaagggcag tcggtgatgg gcagggacca ggacgatctc
      181 atcattatgc cgctgcgtac ttttcagcgg cgtatcgccg gtaatcggga tatctcgcag
      241 atccaacttt cggtgcgcga cgaaagcgcg atcgatcgag tcaagtcggc catcgaacgg
      301 ttgatgcgcg agcgccgcca tctcgcgccc aacgaagaaa acgatttctc agtgatggat
      361 acgcgacaga tcgcgcagac gctgaccggc accacccgca tactcacact gcttttgagc
      421 gcggttgcgg cggtgagcct gctcgtcggc ggcatcggca tcatgaacat catgctggtg
      481 tcggtgacgg aacgaacccg ggaaatcggc attcgcctgg cgatcggcgc gttcgagcgc
      541 gatgtgctca cgcaatttct ggtcgaagcg atggtgctgg cttcgtttgg cggtttattc
      601 ggtgtcctcc tggcgctcgc tgcctcggca gtgctcgctc aagtcttgca ggttcccttg
      661 atattgaatc ccggtattat gattcttgcc tttctctttt ccggagccgt aggggtgatc
      721 ttcggttacg ttccggcgcg ccgcgccgcc caactcgatc ccatcgaggc gctgcgccat
      781 gagtgaaact acgagctccc acgtctgcgg tttgagatcc tcgatcgagc gcgcaattgg
      841 gagagtcgag cggccgttaa tcatacttgc agcgatgtta acctgtgcgg ggtgtttcgc
      901 agtgggacct gattataagg cgccagacat cgtggcgccg gcacaatgga acccgagctt
      961 gcgcggcggt ttgattgcga cggagcccga ggcgcagtcg ctcacagaat ggtggaccac
     1021 attgggcgat acggacttat cagccctcat ggagcgtgcg gtcacgggga atttggatct
     1081 caagttagcg caggcgcgaa ttcgtgaagc gcgggcgcgg cgcggtatcg ccgaagccgg
     1141 actttttcca tcgctcaatc ttggcggctc cgcgacggtc agtcgcggta gcgaagatac
     1201 cgggtccggt atgcgtcgcg agctttacag aaccggcttt gacgcgagct gggaagtcga
     1261 tgtgttcggc ggcgtgcgcc gctccgtcga ggccgcccaa ggagagcttg aagcgagcgc
     1321 ggcggattac caggatgtgt tagtgagcct ggttgccgag gtcgctctga actatgtgga
     1381 ggcgcgcacg tttcagacgc agctccaggt ggccgaagaa aatctcaaag cacaggcgga
     1441 gaccttgcag ctcactgaat ggcgctttgc ggccggcctc gtcagcagtc tcgatgtgga
     1501 acaggccaag actaacttgg aaagcacgcg ctcgcagttg ccgagattgc gaaccaacat
     1561 cgaggcggcc aagaatcgtc tcgcaatttt acttggagta tttccgggcg ggctcgaagc
     1621 gcagctcacg gcaagaaaac ccataccgga ggcgccggcg gaagtggccg tcggcgtgcc
     1681 cgccgaagcg ctgcggcggc ggccggatgt gcgacgcgcg gagcgccagc tggccgcgca
     1741 gaccgcgcgc atcggcgtcg ccaccgcgga tctctatccc aaattcactc tgccgggaac
     1801 catcggactc gaagcgttag cggccaatca tctgttttcc gctgctaacc gggcgtggag
     1861 tctggtgggc agctttgcgt ggactgtttt caaaggcggc gccatccggc aaaacatcga
     1921 ggtgcaaagc gcattgcagg aacaggcttt gaatcaatat gaggcgacga ttctcaccgc
     1981 acttgaagag gtagaaaact cactggttgg ttacgcggaa gaacaggaac ggagagatac
     2041 acttgcggca gcgacccaag cggctcagcg cgccgcggag ct
//
LOCUS       DATIRS010000893         1602 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_656302, whole genome shotgun sequence.
ACCESSION   DATIRS010000893 DATIRS010000000
VERSION     DATIRS010000893.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_656302"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1165)
                     /locus_tag="VLM90_11280"
     CDS             complement(<1..1165)
                     /locus_tag="VLM90_11280"
                     /inference="COORDINATES: protein motif:HMM:NF020134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5940 domain-containing protein"
                     /protein_id="HSQ13598.1"
                     /translation="MAEFTIPNRVGIEGVSYSLAHVPDLVRFGSKPLRELRGNPALAG
                     ELARLLRDFPAATAYAPHQVYIGNIGPETLRDLPQPWYEKLIEGATAQGRFGDLVDQS
                     KFYALLAGADRFDLISFEETWFQAHAAKHATGRAARFKPLSEIQNLCDKGALPLYSGT
                     QLVGAFEAAHEEDASLAAEVLLENLSGKVSAAHALRLVLAQLALKPDDVDFVISCSEE
                     AVGDRYNRGGGNLAKAIAEDVGCGNASGCDVKAFCAGPMYAMVQGASMIQAGVAKRIA
                     VVAGGSLAKLGMKFESHLKKNMPVLEDMLGSFAAILSAAKPGQVCMRLDSAAFHPVRA
                     GGSSQAMAEELAEKPLAKLGMKLTDVDRHGVELHNPEITVPSGSGDVPRTNYLT"
BASE COUNT          360 a          490 c          415 g          337 t
ORIGIN      
        1 gggtgagata attggtgcgc ggcacatcgc cgctgcccga cggcaccgtg atctccgggt
       61 tatgcagctc gacgccgtga cgatcgacat cggtcaattt catgccgagt ttggccagcg
      121 gcttctcggc cagctcctct gccatcgcct gggacgagcc gccggcgcgc accggatgaa
      181 acgccgcgga gtcgaggcgc atgcagacct gccccggctt tgccgcgctg agaatagccg
      241 cgaaactgcc aagcatatct tcgagcaccg gcatattttt tttcaaatgg gactcgaact
      301 tcatgccgag cttggccaac gacccgccgg cgaccaccgc gatccgtttc gcgacgccgg
      361 cttgtatcat gctcgcgccc tgcaccatgg catacatcgg cccggcgcag aacgctttga
      421 catcgcagcc cgaggcgtta ccgcagccga cgtcctcggc gatcgcctta gccaggttgc
      481 cgccgccgcg attgtaacgg tcgcccaccg cttcttccga acagctaata acgaaatcga
      541 cgtcatcggg cttgagcgca agctgcgcta acaccaggcg caacgcgtgg gccgcggaaa
      601 ctttcccgga caaattctcc agcaagactt cggcggccag actggcgtct tcttcatgcg
      661 ccgcctcgaa tgcaccgacg agttgggttc ctgagtaaag cggcagcgcg cctttgtcgc
      721 aaagattttg aatttcgctg agcggcttga agcgcgccgc gcggccggtc gcatgtttag
      781 ccgcatgggc ttgaaaccaa gtctcttcga aggaaatcaa atcgaagcga tccgcgccgg
      841 cgagcaaagc ataaaacttg ctctgatcga ccagatcgcc gaagcgcccc tgcgccgtcg
      901 cgccttcgat cagcttctcg taccaaggct gcggcagatc gcgcagcgtt tccggtccga
      961 tgttgccaat gtagacctga tgcggcgcat aagccgtcgc cgcgggaaaa tcacgcagaa
     1021 gccgagccaa ttcaccggcg agcgccggat tgccacgcaa ctcgcgcaac ggcttcgagc
     1081 caaaccgcac caaatcaggc acatgggcca acgaataaga aacgccctcg ataccgacgc
     1141 gattaggaat tgtaaattct gccattcgat taatccaaaa tgatacgcct tttattactt
     1201 ggctttgaga ggaaaccttg ctgggtgagc aataatttca tcgctcaaat cgacgtcgag
     1261 atccggccaa tagaaatgac ccggtctcgg ctcttccacg ttcagtattt tccccaccgg
     1321 cacatctcta aaccatggaa actcttcaca ggacatgaac aattcgcggt cgccagccaa
     1381 atgccatgac ttgaaatatg cgtaacttca atcggggaag tgttcttccc aagcaggcct
     1441 acgctaatta tatgtatctc tcaatccaaa atattagttt tgcctttaaa atttttactt
     1501 ttgccttatc gtatgaccct atccgcccgc gccaacaaat tcggcggaat cgtcaggccg
     1561 agctgcttgg cggttttgag attgacgagg aactcaaact tt
//
LOCUS       DATIRS010000894         3254 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_557397, whole genome shotgun sequence.
ACCESSION   DATIRS010000894 DATIRS010000000
VERSION     DATIRS010000894.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3254
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_557397"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1313)
                     /gene="nusA"
                     /locus_tag="VLM90_11285"
     CDS             complement(<1..1313)
                     /gene="nusA"
                     /locus_tag="VLM90_11285"
                     /inference="COORDINATES: protein motif:HMM:TIGR01953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HSQ13599.1"
                     /translation="MQQDLNRVIEQVSKEKGIDKAILISALENAMISAAKKTFGHQRK
                     IEAQFNAEIGEVELFEAKTVVETVQDEATEITLATAHENLDPDAEVGDELLTKLDSSL
                     FGRIAAQAAKQNIVQRVRDAEREIIYNEFKGREGQLVNGIVQRFEKRNIIVNLGRTDA
                     ILPEKEQVPRERYRQGDRIRAYIVSVEITSRGPQIILSRTHPGMLIQLFAQEVPEIYE
                     GIVEVKGAAREPGGRAKIAVVSHDHDVDPVGACVGMKGTRVQSVVQELRGEKIDIVHW
                     IADQAEYVCRALAPAKVAKIIIDDEDHTMEVVVPDDQLSLAIGRKGQNVRLASRLTGW
                     RIDVRSEAEAEEETRRARQSIGSIPGIGDFASELLYQEGFKSAEDVADSELAEIMDVE
                     GISKEKAEALHKSAKQFVAEKRSKEAEEAAAASAAAASAAAATAAG"
     gene            complement(1315..1785)
                     /gene="rimP"
                     /locus_tag="VLM90_11290"
     CDS             complement(1315..1785)
                     /gene="rimP"
                     /locus_tag="VLM90_11290"
                     /inference="COORDINATES: protein motif:HMM:NF014617.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000028 - ribosomal small subunit assembly
                     [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0042274 - ribosomal small subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HSQ13600.1"
                     /translation="MDATLTRIWQMTEPLAASEGMEVVDIELKHEGSRGGRVLRVYLD
                     KEGGPAMEDLTKVSRSLSDLLDENDDVVEGAYSLEVSSPGVNRPLKRPEHFAGFVGKR
                     VRVRTREAIDGRRAFLGNLLEVTPQTIAINQDGRRWEIPFSIIEKSNYEHDWSA"
     gene            1958..3067
                     /locus_tag="VLM90_11295"
     CDS             1958..3067
                     /locus_tag="VLM90_11295"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSQ13601.1"
                     /translation="MKAASHSKKPAPAQISWEQILSNLDDGVITADPSGTIKFFNEAS
                     EVMMEISSAAATGQTLEQIFKREPWLIELVGKTSPPRCESARGEGDFVTRWGGKIPVS
                     VTASPLQDRQGTFSGTILLLRDLRHQRELEEDLKRADRLATLGTLAAGLAHEIKNPLG
                     GIKGAAQLLRRSAESDPSVRDYTDIMIREVNRVNTLIEQLLDLSRPTELNLEALNIHE
                     ILEDVLLLEGQSEAARKCLIKKKFDPSLPAIRGDRSRLTQVFLNLVKNAFQSMERPGS
                     VTVTTRLETDFHIRGSGNRRRRLIWVDIADQGAGISDEDLPHIFSPFFTTKMNGTGLG
                     LATCYQIVKEHGGMIRVESSPGKGSVFKISLLVAN"
     gene            3070..>3254
                     /locus_tag="VLM90_11300"
     CDS             3070..>3254
                     /locus_tag="VLM90_11300"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSQ13602.1"
                     /translation="MDQGKILITEDEESLRFVLQKALEGEGYWVQTATNGATARRLLN
                     ENRFDVSLMDIKLPDADG"
BASE COUNT          663 a          987 c          905 g          699 t
ORIGIN      
        1 cccgcagctg ttgccgcggc agcactggcg gccgccgcgc tggccgcagc agcctcttcc
       61 gcttccttac tgcgtttttc ggcgacaaat tgcttggcgg acttatgtaa agcctcggcc
      121 ttttctttgc tgatgccctc aacatccatg atctctgcca gttcgctgtc cgccacgtct
      181 tccgcggatt tgaaaccttc ctggtacagc agttcagagg cgaagtcgcc gattcctgga
      241 atggagccga ttgattgtcg tgcccgcctc gtctcttcct ctgcctccgc ctcactgcgc
      301 acgtcgatac gccaaccggt gagacgcgac gctagccgga cgttctggcc cttcctgccg
      361 atggctaatg aaagttggtc gtcgggcacg accacttcca tggtatgatc ctcgtcgtcg
      421 atgatgatct tggcgacttt agcgggcgcc agagcgcggc atacatactc ggcttggtcc
      481 gcgatccagt gcacgatgtc aattttctcg ccgcgcaact cctgtaccac cgactgcacg
      541 cgggtgcctt tcatgccgac gcaggctcct accggatcga cgtcgtggtc gtgcgataca
      601 acggcgatct tcgcccgccc gccgggctcg cgcgcggcac ctttgacttc aacaataccc
      661 tcatagatct ccggcacttc ctgagcgaag agctgaatca acatacccgg atgggtgcgc
      721 gataaaataa tctgcggccc ccggctggtg atctcgacgc tgacgatgta ggcgcgaatc
      781 cggtcgcctt ggcgataacg ctcccgcggc acctgttctt tttccggcag gatggcgtcg
      841 gtgcggccga gattgacgat gatgttgcgc ttctcgaagc gctgcacgat gccgttgacc
      901 agctgccctt cgcggccttt gaactcgttg taaataattt ctcgctcggc gtcgcgcaca
      961 cgctgcacga tattttgctt ggccgcttgc gcggcgatgc ggccgaatag actcgaatcc
     1021 agcttggtca gcagctcgtc gcccacttcg gcgtcgggat cgaggttttc atgggccgtt
     1081 gccaaagtga tctcggtggc ctcgtcctgg acggtctcga ccaccgtctt ggcttcgaag
     1141 agctccactt cgccgatctc ggcgttgaac tgcgcctcga tcttgcgctg atgaccgaaa
     1201 gttttcttgg cggccgagat catggcattc tccaaagcgc tgatgaggat cgctttgtcg
     1261 atgccctttt ccttgctgac ctgttcgatg actcgattga gatcctgctg catattaggc
     1321 actccagtcg tgctcgtagt tggacttttc gattattgaa aatggaattt cccagcgcct
     1381 gccgtcttga tttatcgcga tggtctgcgg cgtgacttcg agcaagttgc caagaaaggc
     1441 gcgccgcccg tcgattgcct cgcgcgtgcg cacacggact cgcttaccga cgaaaccggc
     1501 aaaatgctct gggcgcttga gcggccgatt gacaccgggc gaggaaactt ccagggaata
     1561 agcaccctcg accacatcgt cgttctcgtc gagcagatcg ctcaggctgc ggctaacttt
     1621 ggttaagtct tccatcgccg ggccaccctc tttgtcgaga tagacgcgca ataccctgcc
     1681 accccggctg ccttcatgtt tgagttcgat atcgacgact tccattccct cgctggccgc
     1741 cagcggttcg gtcatttgcc agatccgggt gagggttgca tccatgtttt cttgccccag
     1801 aaacaaaaaa agcgggcaaa gcccactttg agtacaactc ctaagtgtag agaatttcta
     1861 ccatgacgat caccgccaat gcaaggggcg agagccgatt ggccgttgcg ccaccgcggc
     1921 catctgctat gatttcgcca cgttaaagcc aattttcatg aaagccgcga gtcattccaa
     1981 aaagccagcg ccggcgcaga tctcttggga gcaaatcctc agcaacctcg acgatggcgt
     2041 gatcacggcg gaccccagtg gtacgatcaa atttttcaat gaagcctcgg aagtcatgat
     2101 ggaaatttca tcggccgccg ccaccggaca aaccctggag caaattttca aacgcgaacc
     2161 ctggttgatc gagctggtcg gcaagacctc gccgccgcgc tgcgagagcg cccgcggcga
     2221 gggcgatttc gtcacccgct ggggcggcaa gatcccggtc agcgtcaccg cctcgccgtt
     2281 gcaggatcgc cagggaacat tctcggggac catcctgctg ttgcgcgatc tgcgccacca
     2341 gcgcgaactg gaagaggact tgaaacgggc cgatcgcctg gcgactctgg gaaccctcgc
     2401 ggcgggcctc gcccacgaga tcaaaaaccc cctgggcgga atcaaaggcg cggcgcagtt
     2461 gctgcgccgt agcgccgaaa gcgatccgtc ggtacgtgat tataccgaca tcatgatccg
     2521 cgaagtgaac cgggtgaaca cgctgatcga acagctgctc gacctatcgc ggccgactga
     2581 gctcaacttg gaagcgctca acatacacga aatcctggaa gacgtgctct tgctcgaagg
     2641 tcaatcagaa gcggcgcgaa aatgtctcat caagaaaaaa ttcgatccca gcttgccggc
     2701 gatccgcggc gaccggagcc gcctgacgca agtatttttg aacctggtca aaaacgcctt
     2761 tcaatccatg gaacggccgg gctcggtaac ggtgacaacg cgattggaga ccgattttca
     2821 tatccgcggc agcggcaacc gccgcaggcg gctgatttgg gtggacatcg ccgaccaagg
     2881 cgcgggcatc agcgacgaag atctgccgca tatcttctca ccctttttca cgactaagat
     2941 gaatggcacg ggcttaggcc tggcgacctg ttaccagatc gtcaaagagc atggcggcat
     3001 gattcgcgtc gagagcagcc cgggcaaagg gagcgtgttc aaaatttcac tgctggtggc
     3061 aaattaaaaa tggatcaagg caaaatctta atcaccgagg acgaggaatc gctgcgtttc
     3121 gtattgcaaa aagctctcga aggcgaaggc tattgggtgc agaccgccac caacggcgcc
     3181 accgcccgcc ggctgttgaa cgaaaaccga ttcgacgtct cgctcatgga tattaaactg
     3241 cccgacgccg acgg
//
LOCUS       DATIRS010000895         1600 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1639851, whole genome shotgun sequence.
ACCESSION   DATIRS010000895 DATIRS010000000
VERSION     DATIRS010000895.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1639851"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1058
                     /locus_tag="VLM90_11305"
     CDS             <1..1058
                     /locus_tag="VLM90_11305"
                     /inference="COORDINATES: protein motif:HMM:NF014826.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HSQ13603.1"
                     /translation="TTLELTERECLAQLADGMKVRLIIADPQSYIATLHRCTGSRAHL
                     HRLAQLAARTENTVADEPDAGNPSEIAADTEPGETAIYRRLGLPYIAPELRENDGEVE
                     AAAAGQLPDLLRLEDIQGMTHCHTDYSDGSNSVEEMALAAAAMGMKYLTITDHSPTAF
                     YARGVQIDRLLAQWDEIERVQERIPIKLLRGTESDITESGALDYPDYILERFDVIIAS
                     IHARNKMNSAQMTDRLLKVLQLPLFKIWGHPLGRLIQSRAPIECRVEEILDAVAASRA
                     AIEINGDPHRLDLEPHWIRRARARGIKFIVSTDAHSTRGMGNLHFGVAMARRGWLQRS
                     DVLNTLNPAAFAQAVHP"
     gene            1055..>1600
                     /locus_tag="VLM90_11310"
     CDS             1055..>1600
                     /locus_tag="VLM90_11310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13604.1"
                     /translation="MNRVFLLSPANCNGVRARWLLHKNGQSALAQRLRSDSGAPIGDV
                     FKFLSALYFRGKLTYAVTFARPPEHSMGVAIITPTAGLLPCDAPLSIAQVRGFSRVPI
                     SIKNQRYRTSLCRTAHGLADQIGPACEVVLLGSIASTKYLNLLLPIFGERLRVPAAFI
                     GLGDMSRGGLLLRHVREQRELD"
BASE COUNT          321 a          504 c          470 g          305 t
ORIGIN      
        1 gcaccaccct cgaattgacc gagcgcgagt gcctggcgca attggccgat ggcatgaaag
       61 tgcgattgat tatcgccgac ccgcaaagct atatcgccac gctgcatcgc tgcaccggtt
      121 cgcgcgcgca tctgcaccgc ctggcgcaac tggcggcgcg gaccgaaaat accgtcgccg
      181 atgagccgga cgccggaaat ccgagcgaaa tcgcagcgga taccgagccc ggtgagacag
      241 ccatctatcg tcgactcgga ttaccctaca tcgcgccgga gctgcgcgaa aacgacggcg
      301 aggtcgaagc ggcggcggcg ggacaactcc ccgacctgct gcggctggaa gatattcagg
      361 gcatgacaca ttgtcacacc gactattccg acggtagcaa cagcgtcgaa gaaatggcgc
      421 tggccgcggc ggcgatgggt atgaagtatc taaccattac cgatcactcg cccacggcat
      481 tttacgcccg tggggtgcag atcgaccggc tcttggccca atgggatgag atcgagaggg
      541 tgcaggagcg gatccccatc aagctgctcc gaggaaccga atcggatatc accgaaagcg
      601 gcgcgctcga ttatcccgat tacattctcg agcgtttcga tgtgatcatc gccagtatcc
      661 acgcccgcaa caaaatgaat tcggcgcaaa tgacagaccg tttattgaaa gtactgcagc
      721 tgccgctatt caagatctgg ggccatccgt tgggccgcct gattcagtcc agagcgccca
      781 tcgaatgtcg ggtcgaagaa attctcgatg cggtggcggc gtcccgcgcg gccatcgaaa
      841 tcaatggcga tccccatcga ctcgacttgg aaccacactg gattcgccgc gcacgcgcac
      901 gcggcatcaa attcattgtc tccaccgacg cccattcgac acgcggcatg ggtaatcttc
      961 acttcggcgt cgccatggcg cggcgcggct ggttacagcg ctccgacgtt ttgaatactt
     1021 tgaacccggc ggcattcgcc caggcggtgc atccgtgaac cgggtgtttc tcctatcgcc
     1081 ggccaattgc aacggcgtcc gggcgcgctg gttgctccat aaaaatggcc agtctgcgct
     1141 ggcgcagcgg ctgcgcagcg acagcggcgc acccatcggc gacgtcttta agtttctcag
     1201 cgcgctgtat tttcgcggca aactgaccta tgcggttacc ttcgcccgcc cgcccgagca
     1261 tagtatggga gtcgcgatca tcactccgac cgccgggctg ttgccctgcg atgctccact
     1321 aagcatcgcc caagtgcgcg gttttagccg agtgcctatc agcatcaaaa accagcgtta
     1381 tcgcacttcc ttgtgccgga ctgctcacgg tctcgccgac cagatcggcc cggcctgtga
     1441 ggtggtgctg ctcggcagca tcgccagcac gaaatacctt aacctgctgc taccgatctt
     1501 cggcgagcgg ctgcgcgttc cggcggcgtt tatcggattg ggcgacatga gccgcggcgg
     1561 gctattgctg cgccatgtgc gcgaacagcg cgagctcgat
//
LOCUS       DATIRS010000896         1782 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1148712, whole genome shotgun sequence.
ACCESSION   DATIRS010000896 DATIRS010000000
VERSION     DATIRS010000896.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1782
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1148712"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1254)
                     /locus_tag="VLM90_11315"
     CDS             complement(<1..1254)
                     /locus_tag="VLM90_11315"
                     /inference="COORDINATES: protein motif:HMM:NF012431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSQ13605.1"
                     /translation="MHGGQVMLKAVERSGIDFILSSPGSEWPPVWEALAEAAARGAQK
                     PKYINCRHEAVAVAMAAGYTKVTNRPQVVMLHATAGPLNAAMTLRAALHERTPMVIIS
                     GEIAAYGENTKVADPGGQWLHDLTDLGGSPDLLRGCVKWADRISSVELLGPTIERAVR
                     IAMEPPMGPVLIGIPFECMMEQVDDIDHGKANEVARAHAVDDASIDKALSLIAAAKNP
                     IALTEHVGGDPRAVTRFVELCEMFGIPVMETYRPAFMNFPRTHPLYLHHDPKAVDAAD
                     LILMVDAVTPWYPASKPPKNAKVIAIADEFPNSRLPYWGYNVDLALVAAPATTLGQLV
                     QKAKASEQVAANRASYQQRAARTGEQHAGYFGKLKEEAQKHADDTPIDPRWAVHALAQ
                     ALPVNSVISEETTVYRSLIQETMPRN"
BASE COUNT          329 a          514 c          527 g          412 t
ORIGIN      
        1 gttgcgcggc atcgtttctt ggatcaagct gcgatagacc gtggtctctt ccgagatcac
       61 tgaattcacc ggcagcgctt gcgcgagggc atgcaccgcc cagcgcggat cgatcggcgt
      121 gtcgtcggca tgcttctgcg cttcctcctt cagcttgccg aaataaccgg cgtgctgttc
      181 gcccgtgcgc gctgcacgtt gctggtagct cgcgcgattg gccgcgactt gctccgaggc
      241 tttggctttt tgtaccagtt gtccgagagt cgttgccggc gctgcgacca aggccagatc
      301 gacgttgtag ccccagtagg gcaggcgtga gttgggaaac tcatcggcga tggcaatcac
      361 tttggcgttc ttgggcggct tgctcgccgg ataccaaggc gtcaccgcgt cgaccattaa
      421 aatcaaatcc gccgcatcga ccgccttggg atcgtgatgc aaataaagtg gatgggtgcg
      481 cgggaaattc atgaacgcgg ggcggtaggt ttccatcacc gggatgccga acatttcgca
      541 gagctcgacg aagcgcgtca cggcgcgcgg gtcgccgccg acatgttcgg tcaatgcgat
      601 gggatttttc gccgcggcga tgaggcttag cgctttgtcg atgctggcgt cgtcgacggc
      661 gtgggcgcgg gcgacttcat tggccttgcc gtggtcgatg tcatcgactt gttccatcat
      721 gcattcgaac ggaatgccga tcagcaccgg gcccatgggc ggttccatgg cgatgcgcac
      781 ggcgcgttcg atggtcggcc ccaacaattc caccgacgag atgcggtcgg cccatttgac
      841 gcagccgcgc agtaaatccg gcgaaccgcc caagtcggtg aggtcatgga gccactggcc
      901 gccgggatcg gcgactttgg tgttctcgcc gtaggcggcg atctcaccgc tgatgatcac
      961 catcggcgtg cgctcgtgca gcgccgcgcg caaagtcatc gcggcattga gcggtccggc
     1021 ggtggcgtgg agcatgacga cctgtggccg gttggtcact ttggtgtagc ccgccgccat
     1081 ggcgacggcg accgcttcgt ggcggcagtt gatatacttg ggcttctgcg cgccgcgcgc
     1141 cgcagcttcc gccagcgctt cccacaccgg cggccactcc gagccgggcg aggataggat
     1201 aaaatcaatg ccgctccgtt cgaccgcctt caacattact tgtccgccgt gcatggtggg
     1261 gctccttctt gcgcgcaatg agcgcggttc aatgttcaaa gttcaaaagt tcaaggttga
     1321 ttatcggctt tgcaccacga agtgcttcat gagcttacgc tcgcctacag agcataaaaa
     1381 tggttggcat tcccagaaca taatccccct caattcgtca ttcccgcgca cgcgggaatc
     1441 caggtttgtt ctgcaccgaa ttagcctgga tacccgcttt cgcgggtatg acggagcccc
     1501 gcgggctctt tgttgtgcat atcatcccct cacatgtatt ttcgaaggag gacacgaagg
     1561 tttcggaaaa ttatttcccc gaacttcgtg ctcttcgtat tgctatccaa aaactaacac
     1621 caacatgttt gtcatagcgt acggctttaa tattccggga gtcgaatatt ctcggattcg
     1681 gaaattcctc tcgccaaggc gcaaagacgc caagttcgga gggactagat gaattatctt
     1741 gaagaattta ttcaccgtta ttttccgacc tttgcggcct tt
//
LOCUS       DATIRS010000897         3117 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_557530, whole genome shotgun sequence.
ACCESSION   DATIRS010000897 DATIRS010000000
VERSION     DATIRS010000897.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3117
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_557530"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(77..988)
                     /locus_tag="VLM90_11320"
     CDS             complement(77..988)
                     /locus_tag="VLM90_11320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13606.1"
                     /translation="MKNHYSYRDALETSERINWRIEDIIGADKRLDFAKRFMPESLAQ
                     VDGLSFLSGDEKRILNQIRGHEYLCMFGLVEEFILPFAVDHARAQLSGDDFRTRALLG
                     FAGEEAKHIHLFKRFRNDFAAGFGSDCEFIGPAEDVKRFVLSHSPLGVGIAVLHIEWI
                     TLRHYIDSVRDNQELDPQFKSLLKHHWLEESQHTKIDTLIVEEMAAAATRDEIDLAFE
                     EYGKIGAFIDQGLQQQSELELAAFEQATGRRLSSPERKEMFEAVLKGMRWTYLGTGMT
                     HPNFLASVEAIKPAARPQIEAMASAFS"
     gene            complement(1183..2688)
                     /locus_tag="VLM90_11325"
     CDS             complement(1183..2688)
                     /locus_tag="VLM90_11325"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HSQ13607.1"
                     /translation="MPAEPRAQTLFQIFAARAGAELRRLRAETQVREREQKLGRLVGS
                     AMDAIIELDSDLAITQMNPAAERVFGCGAGAMIGETFSHRLVPDAREKLARLIIELDS
                     RPDGQRSLWVAGGFHAIAREGSSFQAEATLARFDVERAPYYTLILRNVNERIEAENKI
                     RSLTVEAEYLRDEIKSLVGADGIVGQSRPWLKVLGEVQEVAATDATVLILGETGTGKE
                     VIARSIHRASRRHNQPLIKVNCAAIPAALIESELFGHEAGAFTGATRKRDGRFAMAHG
                     GTIFLDEVGELPFDLQSKLLRVLQEGEFEPVGSSQTRRVDVRVLAATNRDLQRCAGEG
                     KFREDLYYRLNVFPIELPPLRERRGDIGVLAAAFAEKFARSMGRPIEPLSADCIRRLE
                     AYRWPGNVRELQNIIERAVITARDRRLNLDRALPESVGVLAVPLTGGEAAAKRVRTAK
                     ELEDLERENIVAALEASGWKVAGADGAATLLGIKPTTLNSRLKALGIARKR"
     gene            complement(2743..>3117)
                     /locus_tag="VLM90_11330"
     CDS             complement(2743..>3117)
                     /locus_tag="VLM90_11330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13608.1"
                     /translation="WCAMERSPLQEIDVDAALRTVLEGTATATGAEFFRALVKNLAEA
                     LGTHGAWVTEYFPEARRLRALSFWLGDRWLDGWEMVVDGTPCERVIDNRCLIHIPDNL
                     LDIYGDDPDVRAMGAASYMGMP"
BASE COUNT          627 a          955 c          881 g          654 t
ORIGIN      
        1 accgcgaatt gtgacatgtt ccatttctcc ttttagtttt gtcgatccga tgcgaatgtt
       61 tcctagaccg ttagaatcag ctaaacgccg acgccatcgc ttcaatctgc ggtcgcgctg
      121 ccggcttgat cgcttcgacg ctggcaagga aattcgggtg cgtcatacct gtacccaaat
      181 aggtccagcg catccctttc aatactgcct cgaacatttc tttacgctca gggcttgaaa
      241 gcctgcgccc agtcgcctgt tcaaaggcgg caagctccaa ctctgactgc tgctggagac
      301 cttggtcgat gaaggcgcca attttgccat actcctcgaa cgccaggtcg atttcatccc
      361 gcgtcgccgc cgcggccatt tcctcgacga tcaaagtatc gatcttggtg tgctgcgact
      421 cctccaacca gtgatgcttc aacaggctct tgaattgcgg atcgagctcc tggttgtcgc
      481 gtacgctgtc gatgtagtgc cgcagcgtga tccattcgat atgcaaaacc gctattccga
      541 cgcccagcgg actgtgcgac agcacgaagc gcttgacatc ttcggccgga ccgatgaact
      601 cacagtcgct gccaaagccc gcggcaaagt cattgcggaa ccgtttgaat agatgaatat
      661 gcttggcctc ttcgccggcg aacccgagca gcgcgcgagt gcgaaagtcg tcgccgctca
      721 gctgcgccct ggcgtggtcg acggcgaatg gcagaatgaa ctcttcgacc agaccgaaca
      781 tgcagaggta ctcatggccg cggatctggt tcaggatccg tttctcgtcg ccggatagga
      841 agctgagccc atccacctgg gcgagcgatt ccggcatgaa ccgcttggcg aaatccaaac
      901 gcttgtcggc gccaatgatg tcttcgatgc gccagttgat ccgttccgat gtttccaacg
      961 cgtcccgata actgtagtga ttcttcatga cccttcctcc gtgatttatt cggctcagcg
     1021 ccgttgctcg gaactattgc gcgaaccgtg ccaaagccgt gggagtgtcg aataacttca
     1081 gaaatcaaga gtttggaatg agaatgccga taggaatggg caacgagatc tcgctactaa
     1141 cgagatctcg tccgcgggga ctatggtttt tcgtgaacgc gattagcgtt tgcgcgcgat
     1201 accgagcgct ttcagacgcg agttgagcgt cgtcggcttg atgccaagca gggtggcggc
     1261 gccgtctgcg ccggcgactt tccaaccgct cgcttcgagg gcggcgacga tattctcccg
     1321 ctccaagtct tcaagctcct tagcggtgcg cacccgtttt gcggcggctt cgccgccggt
     1381 caacgggacg gcgagaacgc cgacgctttc cggcagggcg cggtcgagat tgagcctgcg
     1441 atcgcgggcg gtgatcacgg cgcgctcgat aatattttgt agttcgcgga cgttgccggg
     1501 ccaacggtag gcttccagac gacggataca gtcggccgac agcggttcga tgggccggcc
     1561 catgctcctg gcgaattttt cggcgaaggc cgcggccagc acgccgatat ccccgcgccg
     1621 ttcacgcagc ggcggcaact cgatgggaaa aacattcaac cggtaataaa gatcctcgcg
     1681 gaatttgccc tcgccggcgc aacgttggag gtctcgattg gtggcggcca agacacgcac
     1741 gtccactctt cgggtctgcg agctccccac cggctcgaac tcgccttctt gcaatacccg
     1801 cagtaattta ctctgcaagt cgaacggcag ctcacccact tcatcgagaa agatcgtgcc
     1861 gccatgggcc atggcaaagc ggccatcgcg tttcctggtg gcgccggtaa aggctcccgc
     1921 ttcatggccg aaaagttcgc tctcgatcaa tgccgccgga atcgccgcgc aattgacctt
     1981 gatgagcggc tggttgtggc gccggctggc gcggtgaatg gatcttgcga tcacttcttt
     2041 tcccgtgccg gtttcgccga gaatcaacac cgtggcatcg gtagcggcta cctcctgcac
     2101 ttcgcccaat acctttagcc aaggccgact ttggccgacg atgccatcgg cgcccaccag
     2161 cgacttaatt tcatcgcgta gatattcggc ctcaacggta agggagcgaa tcttgttctc
     2221 ggcttcgata cgttcattta cattgcgcag gataagggtg taatacggcg cccgctcgac
     2281 atcgaagcgc gccagggtcg cctccgcttg aaatgaacta ccttcacgag cgatggcgtg
     2341 aaatccgccg gcaacccata acgaacgctg accgtctggc cggctgtcga gctcgatgat
     2401 caatcgagcg agcttttcgc gcgcgtctgg cacgagacga tgactaaaag tttcgccgat
     2461 catagcgccg gcgccacaac cgaatactct ctccgcggcg ggattcatct gcgttatcgc
     2521 caaatcgcta tcaagctcga tgatcgcgtc catggcgctg ccgaccaagc ggccgagctt
     2581 ctgctcccgc tcgcgcacct gggtttcggc gcgtagccgg cgcaactcgg cgccagcgcg
     2641 cgcggcaaag atctggaata aagtttgcgc ccgcggctcg gcgggcatcg gccgcatgtc
     2701 gaggacagcg agatggccga gaatcgcgcc gtcgatatcg agctacggca tgcccatata
     2761 actagccgca cccatcgccc gtacatccgg gtcatcgccg tagatatcga ggagattgtc
     2821 agggatgtgg atcaagcagc ggttatcgat cacgcgctca cagggcgtgc cgtcaacgac
     2881 catttcccag ccgtcgagcc agcggtcgcc aagccaaaac gacagagccc gcagccgccg
     2941 agcttcagga aaatattccg ttacccaggc gccatgagta ccgagcgcct cggcgagatt
     3001 tttcaccaac gcccgaaaaa actcagcgcc ggttgcggtc gcggttcctt ccaagactgt
     3061 gcgcagcgca gcatcgacat cgatttcttg caacggcgaa cgttccatgg cgcacca
//
LOCUS       DATIRS010000898         2340 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_460297, whole genome shotgun sequence.
ACCESSION   DATIRS010000898 DATIRS010000000
VERSION     DATIRS010000898.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2340)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2340)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2340
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_460297"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(152..340)
                     /locus_tag="VLM90_11335"
     CDS             complement(152..340)
                     /locus_tag="VLM90_11335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13609.1"
                     /translation="MKLPWLARLVRGMGLVILVVSSLAAGVVYAADRVNFLYTARVMS
                     QAYPWIAQEAGLYRKYDL"
     gene            524..1426
                     /locus_tag="VLM90_11340"
     CDS             524..1426
                     /locus_tag="VLM90_11340"
                     /inference="COORDINATES: protein motif:HMM:NF040043.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6282 family protein"
                     /protein_id="HSQ13610.1"
                     /translation="MSSHTVSTPTHERCVTSYAARTQYKPGVVHPPHIKVKDAIDIHC
                     HAHEGQQDPYDLARRASLAEMKGLLFKSIPGDDPVQATQAVQDDVNRWAEKQEGVKPI
                     SCWSAYVCGRQMAPVTAKIVSEMIDRGVSAIWLPVFTHAITMSTVGTYGRFVRGRENA
                     GWVGPIGWDEAMKIGHYDLDADGKLKPEIRDIVHLCADRNVALFFGHATHAEIYKLSE
                     EVEKAGLKRAVIDHPFSPFLNVSPDMMKEIRGSGVFFNFTWDELSPLLGVDPQIMYNT
                     IREVGVEHFTLSSDAGEPLFPDSV"
     gene            complement(1652..>2340)
                     /locus_tag="VLM90_11345"
     CDS             complement(1652..>2340)
                     /locus_tag="VLM90_11345"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13611.1"
                     /translation="GSVKNVLTHSLMGKPEIKRPEDLKGKRIGVGRIGGNSHYFTMYG
                     MRQKGLDPLKDANLIQTGGAPETFLALSTGAVDAASLTTPQDTRAAFQGFNYVIDGRE
                     IKPAYVATGFVTLRSVIAKRPKAVSQFMHVMAESLKIMISDRELAFRVISRKIGLTDR
                     KVFDAAYTAELKVLEPRLDIKAGAIQANLDEIARTDPRAKQVKAEQLIDRRFLDEMEK
                     DGTFDKLGLK"
BASE COUNT          519 a          715 c          614 g          492 t
ORIGIN      
        1 aactcttgat cccaccgata aaaaccaaat ccttgttgcc ctggacaaag ggccgggtga
       61 tcgtcgccgc gccgatctgc gccacctcgc tatcccccga cagaatcgcc gccgccgatg
      121 gcgctcccgg cgtgacaaac accaacggca cttacaagtc gtattttcta tagagcccgg
      181 cctcctgggc gatccaagga taggcctgag acatcacccg cgccgtatag agaaaattga
      241 cacgatctgc cgcatacaca accccagcgg ccagactcga cacgacaagt attaccagac
      301 ccatgccgcg aaccagtcgc gctaaccatg gcaatttcat ccgtcctcct tgcttgctgg
      361 acaacaattt gctgctgtcg ttcttacaac agatggccgg tagaaaccaa atcaattttc
      421 gcggaattgc tcacgcctca agcttcaccg ccttttgata ctttgacaaa gccagggcaa
      481 ctgtagcacc atcagcctca gccaaacgaa ggaggctaaa tccatgagca gccataccgt
      541 ttccacgccg acccatgaac gttgcgtcac atcctacgcc gcgcgcacgc agtacaagcc
      601 cggtgttgtc catccaccgc atatcaaagt caaagacgcc atcgacattc attgccacgc
      661 ccatgaaggc cagcaagatc cctacgactt ggcgcgacgc gcgtccttgg cggagatgaa
      721 aggtttgctg ttcaaaagca ttcccggcga cgatccggtg caggcgacgc aagccgtcca
      781 agacgacgtc aatcgttggg cggaaaaaca agaaggcgtc aaaccgatca gctgctggtc
      841 ggcctacgtc tgcggccggc aaatggcgcc ggtgacggca aagatcgtca gcgagatgat
      901 cgaccgcggc gtcagcgcca tctggctgcc ggtattcacc catgcgatca ccatgagcac
      961 cgtcggcacc tacggccgct tcgtgcgcgg ccgcgaaaac gccggctggg tcggccccat
     1021 cggttgggac gaagcgatga aaatcggcca ctacgatctc gacgccgacg gcaaactgaa
     1081 accggagatc cgtgacatcg tccatctctg cgccgacaga aacgtcgcgc tgttcttcgg
     1141 ccacgcgact catgcggaga tttataagct ctctgaggaa gtagagaaag ccggcttgaa
     1201 acgcgccgtc atcgaccatc ccttcagccc gtttttgaac gtttcgccgg acatgatgaa
     1261 agaaatccgc ggcagcggcg tatttttcaa tttcacctgg gacgaactct cgccgctctt
     1321 aggcgtcgac ccgcagatca tgtacaacac cattcgcgaa gtcggcgtcg agcatttcac
     1381 cctgtccagc gatgccggcg aaccgctgtt ccccgactcc gtctaagcca tgcgcctggt
     1441 gcgcggctac atggaagcgt ttggtttgaa tcaggacgag ctttataccg tgtgcacgaa
     1501 gaacccggcg aaggtggtgg ggctgaagtt gcactgatcg aatagtgaag gtcgaggatc
     1561 gaggatcgat gatagcggat cacaataagt gattagtgcc gtaaaagtct ttcgctatcc
     1621 tcgatcctcc atcttcgatc ctcaatgagt attatttcag ccccaattta tcgaacgtcc
     1681 cgtccttctc catctcgtcg agaaaacggc gatcgatcaa ctgctcggct ttcacctgtt
     1741 ttgcccgcgg atcggtgcgg gcgatttcgt ctaggttggc ttgaatggcg ccggccttga
     1801 tatccagccg cggctccagg actttcaact cggccgtgta ggccgcgtcg aagactttgc
     1861 ggtcggtcag gccgattttt ctgctgatca ctctaaacgc cagttcgcgg tcgctgatca
     1921 tgatcttcag cgattcggcc atgacatgca tgaattgact gacagctttc ggtcgcttgg
     1981 cgattactga acgtaaagta acaaaccccg tcgccacgta cgccggcttt atctcgcggc
     2041 cgtcgatgac gtagttgaaa ccctgaaacg cggcgcgggt gtcctgcggc gtcgtcagcg
     2101 acgcggcgtc caccgcgccc gtgctcaaag ctagaaaggt ttccggcgcg ccgccggttt
     2161 ggatcaagtt ggcatccttg agcggatcga ggcccttctg gcgcatgcca tacatcgtaa
     2221 agtaatgcga gttgccgccg atgcggccaa ctccgatccg tttccctttt aagtcttccg
     2281 gccgcttgat ctcgggctta cccataagac tgtgggtcaa tacgttcttc accgagccga
//
LOCUS       DATIRS010000899         1790 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_164041, whole genome shotgun sequence.
ACCESSION   DATIRS010000899 DATIRS010000000
VERSION     DATIRS010000899.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1790)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1790)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1790
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164041"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(96..>1790)
                     /locus_tag="VLM90_11350"
     CDS             complement(96..>1790)
                     /locus_tag="VLM90_11350"
                     /inference="COORDINATES: protein motif:HMM:NF040438.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase domain-containing protein"
                     /protein_id="HSQ13612.1"
                     /translation="FLNDGPEANDPATLEHAGNGFLMRQGYTIVWCGWQGDLMPLKNW
                     LVLNVPVATNKGKPIVATVRSEIVVDEKGVKSQPLSADERVKSYEAASRDKSKSSLTV
                     REKSYGKRIAVAESEWEFAAAVKDQRRGTEVIKASSTDLYLRGGFKPGHIYEFIYPAK
                     NPLVLGLGFAVVRDLVSFLRFESKDRAGKANPVASANKTSSITHAYAWGRSQSGRYLR
                     DFVYHGFNEDEKRRKVFDAIAPHVGGGGRLFMNYEFARPVTSSQQHTNQLDPELFPHA
                     YNIIKDAQTGRSDGILKRPKTDPFIFHTQTSTEYWQKRGCLAHTDGKGKDLKLPDNVR
                     LYVIASAQHNSPFGSEPAKDDSQFLVNPLPAGDVLRALMVALDLWVTKGIAPPPSRYP
                     NVNDRTLMAPTRTGFPKLPGVNFVGLHNRQLFLDYGKSILRGKIELHPPRPFGKSYEI
                     LVPKVDADGNDIAGIRLPAIEVPVGTYTGWNLRPRGLAEGELSGLLGSFIPFAKTKTQ
                     RRNTGDPRLSLQERYRNRVDYVQRVSHAARILVDQRYLLPDDAERIIAEAQKVRVV"
BASE COUNT          344 a          481 c          547 g          418 t
ORIGIN      
        1 gacattcaaa cccgttcacc taatcaactg aatttgttca attaataccc ggacactagt
       61 gatatgaagt atcaacgaaa tagttaaagt aatgattaca cgactcgaac cttctgtgct
      121 tcggcgataa ttcgttcggc atcgtccggc aacaaatatc tttgatcgac caggattctc
      181 gcggcgtggc tgacgcgctg aacgtaatcg actctgttcc ggtaacgctc ttgaagcgac
      241 aggcgcgggt caccggtgtt acgcctttgc gtctttgttt tggcgaaggg aatgaacgag
      301 cccagcaagc cagacagctc gccttccgcc aggccgcggg gccgcaggtt ccaaccggtg
      361 taagtaccga cggggacttc gatggccggt aggcggatgc cggcgatgtc gttgccgtcg
      421 gcgtcgactt tgggcacgag gatttcatac gacttgccaa atggtctcgg cgggtgaagc
      481 tcgatcttgc cgcgcagaat gcttttgccg tagtcgagaa acagttggcg gttgtgcagg
      541 ccaacgaagt tcacgccggg gagtttcgga aagccggtgc gagtcggcgc cattagcgtg
      601 cgatcgttca cgtttggata gcggctcggt ggtggcgcga tccctttcgt cacccataaa
      661 tccaatgcga ccatcagcgc gcgcagcaca tctcccgccg gtagcggatt gacgagaaac
      721 tggctgtcgt ctttggccgg ctcggagccg aagggactgt tgtgctgggc gctggcgatg
      781 acgtagaggc gcacgttgtc tggtagtttg agatcttttc ccttgccgtc ggtgtgggcg
      841 agacaaccgc gcttttgcca gtattccgtc gatgtctgcg tatggaaaat gaacggatcg
      901 gttttgggac gtttcaatat tccatcgctt cggccagtct gcgcgtcttt gatgatgttg
      961 taggcgtgcg gaaatagttc cggatcgagc tggttggtgt gttgctgcga tgaagtgacc
     1021 ggccgggcga attcgtagtt cataaacaac cggccgccgc cgccgacatg gggcgcgatg
     1081 gcatcgaaca cttttcggcg cttctcgtct tcattgaatc catggtagac gaagtcgcgc
     1141 aagtaacgtc cgctctggga gcggccccag gcgtaggcat gggtgatgct cgatgtctta
     1201 tttgccgaag cgacgggatt cgctttgccg gcgcgatctt tagactcgaa gcgcaggaag
     1261 gaaaccaaat cgcgcacgac ggcgaagccg aggccgagga cgagtgggtt cttagcggga
     1321 taaatgaact cgtagatatg gccgggcttg aatccgccgc gcaggtagag atcggtgctg
     1381 ctcgctttga ttacttctgt gccgcgccgc tggtctttca cggcggcggc aaattcccat
     1441 tcgctttcag ccacggcaat tctcttaccg taggatttct cgcgcacggt gagcgacgac
     1501 ttcgatttgt cccgcgacgc ggcctcgtaa ctcttgaccc gctcgtcggc gctgagcggc
     1561 tgcgacttga cgcctttctc gtcgacgaca atttcactgc gcactgtcgc gacgatgggt
     1621 ttgcctttgt tggtggcgac gggaacgttg agcaccagcc aattcttcag cggcatcaga
     1681 tcgccctgcc agccgcacca gacgatggtg tagccctggc gcatgagaaa gccgttgccg
     1741 gcatgctcca gcgtcgccgg gtcgttggct tccgggccgt cattcaaaaa
//
LOCUS       DATIRS010000900         2125 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_164056, whole genome shotgun sequence.
ACCESSION   DATIRS010000900 DATIRS010000000
VERSION     DATIRS010000900.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2125
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164056"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1283
                     /locus_tag="VLM90_11355"
     CDS             <1..1283
                     /locus_tag="VLM90_11355"
                     /EC_number="6.4.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF006761.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="pyruvate carboxylase subunit B"
                     /protein_id="HSQ13613.1"
                     /translation="IAAALDDVGYWSLETWGGATFDATLRYLKECPWERLRKLRAAMP
                     KTRFQMLLRGQNVVGYKNYPDDIVQAFVRRAAANGIDVFRIFDAMNDVRNMKTAIEAG
                     LKTGKLVEGGVCYTISPVHSPDYFLHVAEKLADMGVQIICLKDMGGLLAPYAAYEIIK
                     KIKSRIALPLHLHSHCTAGLAQMTYMMAIEAGADILDTAISPFSQGTSQPATEQIVAG
                     LMGTPHDTGLDLAKLAKIAEYFYRIRPNYREFESPVNNQIKPDVLVSQIPGGMLSNLV
                     AQLRQQNAENKLEAVLAEMPHVRKDLGYPPLVTPTSQMVGAQAALNVMTGKRYSVVAM
                     ETRNYVMGLYGEAPGEIADEIKEKVLGKKEPITCRPADLLKPGLEKARSEAGSLAKSE
                     EDVITYALFPEIAKDYFLHRDNGGGKHASVSTSH"
     gene            complement(1338..>2125)
                     /gene="hisG"
                     /locus_tag="VLM90_11360"
     CDS             complement(1338..>2125)
                     /gene="hisG"
                     /locus_tag="VLM90_11360"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: protein motif:HMM:NF013773.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HSQ13614.1"
                     /translation="FPTIDDAEIRCSLARPQEMSRYVEMGTLDVAITGKDWTIENNSD
                     VQVVCEMVYSKTSFRPTRWVVAVPRESPVKKIEDLKGKRISTEMVNFTKRYFAERNIP
                     VEVEFSWGATEAKAAEGLVDAIVEVTETGTTIRAAGLDIIHELMESCPQLIANKAAWQ
                     DPWKRAKMEQIKMLLLGALSAENKVGIKLNVPEGSLERVVELIPSITAPTVATLHPSP
                     NLKGVKWYSIESVLEEIRVRDLIPKLIEAGAMGIIEYPLNKII"
BASE COUNT          445 a          611 c          618 g          451 t
ORIGIN      
        1 cgatcgcagc ggcgctcgac gatgtcggct actggtcgct cgagacctgg ggcggcgcga
       61 ctttcgatgc gacgctgcgc tatctgaaag aatgcccctg ggagcgcttg cgcaaactgc
      121 gcgcggccat gcccaagacc cgctttcaga tgcttctgcg cgggcaaaat gtggtcggct
      181 ataaaaacta ccctgacgat atcgtccaag ccttcgtgcg acgcgctgcc gccaacggca
      241 tagacgtgtt tcgcatcttc gacgccatga acgatgtgcg caacatgaag accgccatcg
      301 aagccggtct caagaccggc aaactggtcg aaggcggggt ctgttacacc atcagtcccg
      361 tgcactcgcc agattatttc ctgcatgtgg cggaaaagct cgccgatatg ggtgtgcaga
      421 ttatctgcct caaagacatg ggcggattgc tggcacctta cgcggcttat gagataatca
      481 agaagatcaa gtcgcgcatc gcgctgccgc tgcatttgca ttcacactgc accgccggtt
      541 tggcgcagat gacttacatg atggccatcg aggcgggcgc ggatattctc gatacggcga
      601 tttcgccgtt ctcccaaggc acgtcccagc cggccaccga gcagatcgtc gccgggctca
      661 tgggcacgcc gcacgacacc ggactggatc tcgccaagct tgccaagatc gccgagtatt
      721 tttatcgtat acggcccaat taccgcgagt tcgaaagccc ggtgaacaat caaatcaagc
      781 ccgatgtctt ggtctcgcag atccccggcg gcatgctctc caacctggtc gcgcaactgc
      841 gccagcagaa tgccgagaat aagctcgagg cggtgctcgc cgagatgccc catgtgcgca
      901 aggatttagg ctatccgccg ctggtgacgc cgacgagcca gatggtcggg gcgcaagccg
      961 cgctgaacgt catgaccggc aagcgctact cggtggtcgc catggaaacc cgaaactacg
     1021 tcatggggct gtacggcgaa gcgccgggcg agatcgccga tgagatcaaa gaaaaagtgc
     1081 tgggtaaaaa ggagcccatc acctgccgtc cggcggattt attgaagcct ggactggaaa
     1141 aggcccgcag cgaagccggt agcctggcga agagcgaaga agatgtcatc acctatgcgc
     1201 tatttccgga aatcgcgaag gattactttc tgcaccgaga caatggcggc ggaaaacacg
     1261 cgtcggtgag cacaagccac tagagatttt ttgcggagcg gtggctattc ggccgccctc
     1321 aaagggcggt gtcattgcta gataatctta ttcagcggat actcgataat tcccatggcg
     1381 ccggcttcga tcaatttcgg gattagatcg cgtactctga tttcttcgag cacgctttcg
     1441 atggaatacc acttaacgcc tttcagattt ggcgatgggt gaagggtcgc gacagtcggc
     1501 gcggtgatac tcggaatcaa ctcgacgact ctttccaggc tgccttcggg aacgttcagt
     1561 ttaatgccga ctttgttctc ggcggaaagc gcgcctagca acagcatttt tatctgctcc
     1621 atcttggccc gcttccatgg gtcctgccag gccgccttgt tggcgatcag ctgcgggcag
     1681 gactccatca actcatggat gatgtccagg ccggcggcac ggatggtggt gccggtctcg
     1741 gtaacttcga cgatcgcgtc gaccagtccc tcggcagcct tcgcttcggt ggcgccccag
     1801 gaaaattcga cttccacggg aatgttgcgt tcggcaaaat aacgcttggt gaagttcacc
     1861 atctcggtgg aaatgcgctt gcccttgagg tcttcgattt tcttgaccgg cgattctcgc
     1921 ggcaccgcca cgacccaacg ggtcgggcga aagctggttt ttgaataaac catctcgcag
     1981 acgacctgga cgtcggagtt gttttctatc gtccagtcct tgccggtgat ggcgacgtcc
     2041 agtgttccca tttcgacgta acgcgacatc tcttgggggc gcgccaggct gcaccggatc
     2101 tccgcgtcat cgatggtcgg aaagt
//
LOCUS       DATIRS010000901         1535 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_951472, whole genome shotgun sequence.
ACCESSION   DATIRS010000901 DATIRS010000000
VERSION     DATIRS010000901.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1535
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_951472"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..480)
                     /locus_tag="VLM90_11365"
     CDS             complement(<1..480)
                     /locus_tag="VLM90_11365"
                     /inference="COORDINATES: protein motif:HMM:NF020928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tex-like N-terminal domain-containing protein"
                     /protein_id="HSQ13615.1"
                     /translation="MTQSIAETTQTKITHLIAGELSVGAHQVAATVALLNEGATVPFI
                     ARYRKEVTGNLDDTQLRNLEERLLYLRELEDRRGTILASIEEQGKLTDELRSAVEGAA
                     TKQALEDIYLPFKPKRRTKAQIAREAGLAPLAEALLADPMLKPEEEAHRYIKTDAGFA
                     "
     gene            complement(605..1513)
                     /locus_tag="VLM90_11370"
     CDS             complement(605..1513)
                     /locus_tag="VLM90_11370"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSQ13616.1"
                     /translation="MGYLPKAGVGFELIEFRSNGREVQGGIFSPDAKLFKPSSTAVVL
                     VHGVESYWYSAPTMFLGAYLAEAGYTVLGYNGVHSGDSFRTSEFDTAVSEAGDAVSFM
                     ASRGCDRIFLVGHSLGTPIVEYYQGDQPHPAVKALGVYGPHIDIPAVTRDSLLGPDLY
                     ESFASECRELVAAGKGDEIKLLPFREGRFIITSAKTFISYRDVKTSKANVEKMIGNIK
                     VPFLIVYDDGDNIQGKGIVTRRATIAGRIKANAVKSPQAEIVVIPSSPGNSPFQAHLF
                     VNNERMVTNQTIDWLKSIGLPPAQRW"
BASE COUNT          314 a          405 c          465 g          351 t
ORIGIN      
        1 ggcaaacccg gcatctgttt tgatgtatct atgggcctct tcctcaggtt tgagcatcgg
       61 atcggcaagc agcgcctcgg cgagcggggc gaggccggct tcgcgggcga tctgcgcctt
      121 ggtgcggcgc ttgggtttga agggcagata aatatcttcc aacgcctgct tggtggcggc
      181 gccttcgacg gcggaacgca gctcatcggt gagcttgccc tgctcttcga tggacgccag
      241 aattgttccg cgccgatcct ccaattcgcg gagatagagc agccgctctt cgagattgcg
      301 cagctgggtg tcgtcgagat tgccggtgac ttctttgcga tagcgggcga tgaacggcac
      361 ggtcgcccct tcattcaaca aggcaacggt ggcggcgacc tgatgggcgc cgacgctaag
      421 ttcgccggcg atcaggtggg tgatcttagt ttgggtggtc tcggcaatgc tttgcgtcat
      481 ggatgaagcc tcatgggatc aacgaatcga ttgagtatat cagcgttgca taaagaatta
      541 agcgcggtga aagaaaagtc acgcaaccgg ctaaaaacaa agcaggccag caaaaaattg
      601 tgacttacca gcgctgtgcc ggcggcaggc caatcgattt taaccaatcg atggtctggt
      661 tcgtgaccat tctctcattg ttgacgaaca agtgggcttg aaatggcgag ttgccggggc
      721 tgctgggaat gacgacgatc tcggcttgcg gtgatttaac cgcattcgct ttgattctgc
      781 cggcgatggt tgcgcgtcgg gtgactatgc ctttgccttg gatgttgtcg ccgtcgtcat
      841 aaacgatcag aaacggcacc ttgatattgc caatcatttt ctcgacattg gccttgctag
      901 ttttgacgtc ccggtagctg ataaaggttt tcgccgaagt gatgatgaac cggccttcgc
      961 gaaagggcag cagcttgatc tcatcgcctt tgccggcggc gaccaactcg cggcattcgc
     1021 tggcgaagct ttcgtatagg tcggggccga gcaatgaatc gcgagtcacc gccggaatgt
     1081 cgatatgcgg gccgtagacg cccagggctt tgaccgccgg gtgcggctgg tcgccttgat
     1141 agtattcgac gatcggtgtg ccgaggctat ggccgacgag aaatattctg tcgcagccgc
     1201 ggctggccat gaacgaaacc gcatcgccgg cttcgctcac cgctgtgtca aattccgaag
     1261 tgcgaaatga atctcccgaa tggacgccgt tgtagcccag cacggtgtag ccggcttcgg
     1321 cgagataggc gccgagaaac atcgtcggcg ccgagtacca ataggattca acgccgtgca
     1381 ctaataccac agcggttgac gacggcttga acaatttcgc atcggggctg aagatgccgc
     1441 cctgcacctc tcgaccgttg ctgcgaaatt ctatgagttc aaatccgacg ccggctttag
     1501 gtaagtagcc catggcaagg ttctcctgtc actta
//
LOCUS       DATIRS010000902         2570 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_656704, whole genome shotgun sequence.
ACCESSION   DATIRS010000902 DATIRS010000000
VERSION     DATIRS010000902.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2570
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_656704"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..575
                     /locus_tag="VLM90_11375"
     CDS             <1..575
                     /locus_tag="VLM90_11375"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HSQ13617.1"
                     /translation="IQSGDIIVDGLALSDANLDAAKLRTKVGMVFQSFNLYPHMTVLS
                     NITLAPIKVKRLAASAAEKIAFELLERVGIPDKANVYPANLSGGQQQRVAIARALAMK
                     PSIMLFDEPTSALDPEMINEVLEVMTDLARDGMTMIVVTHEMGFARRVAHQVVFMDQG
                     QVIETGEPEKFFAAPESPRAQQFLSKILSH"
     gene            586..1443
                     /locus_tag="VLM90_11380"
     CDS             586..1443
                     /locus_tag="VLM90_11380"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HSQ13618.1"
                     /translation="MKSLLLSALVAVCLVAAVGSAQAQSTLEKIDKSGTLIIGTRTGS
                     PPFAYVNKNNEWVGFSVDLVERTILPGLSKKLNKQIKLEKKESAPQTRIPLLTSNAVD
                     LIAETMTDTQSRRDNVDFSLTFFVTGAQFLVKKGSPIKNIQTIAGRRIAAQQGSTNAK
                     IIRERVPNAKLLEFPDQPAAFQALAQGQVNAYTNDGIQLAGLRAKAPKPEDWAVVGEF
                     FSYEPYGMAMRKNDSDFRQAVNVGLMDAISSGLYFEIYDKWFGPKGEVPYPLTADTKR
                     FLQMQVVPK"
     gene            1543..2268
                     /locus_tag="VLM90_11385"
     CDS             1543..2268
                     /locus_tag="VLM90_11385"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HSQ13619.1"
                     /translation="MNYQFDWSVLWSGQSGSWLLQGLLTTLEISLLGWLLAVLLGIFS
                     GTLRTAPLPPLRWLAAAYVEFFRNVPLLVWMFLWYFGVPPLLPQTIQEWLFEHAAEFW
                     AGVLALGVYHGARFAEVIRAGIQSIPKTQFEAAVSTGLTAAQSYRLIILPVALRLIVP
                     PATNESLNLIKNSSVALTIGVAELTFQTRQIETYTAKAFEALAAGTVIYLVVCVAISA
                     LMARVERLVAIPGMIVRGRVGES"
     gene            2270..>2570
                     /locus_tag="VLM90_11390"
     CDS             2270..>2570
                     /locus_tag="VLM90_11390"
                     /inference="COORDINATES: protein motif:HMM:TIGR01726.1"
                     /note="The N-terminal region of this protein, as described
                     by TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_process: GO:0015837 - amine transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HSQ13620.1"
                     /translation="MDLQVIVNNFSFLILQGFFGIGAFAGGTLRLALPAIVLGFVLGT
                     FIGLARLARTRWLNLPATIYVEFFRGVPLVMVIFWFWFIIPTLLGRSLPEYSVALT"
BASE COUNT          517 a          782 c          708 g          563 t
ORIGIN      
        1 ccattcaatc cggcgacatc atcgtcgacg gtctggctct gtcagatgcc aacctcgacg
       61 ccgcgaagtt gcgcacgaaa gtcggcatgg tgtttcaatc cttcaatctc tacccgcaca
      121 tgacggtgct cagcaacatc accctggcgc cgatcaaggt aaagcgcctg gccgctagcg
      181 ccgcggaaaa aatcgccttc gagcttttag aacgcgtcgg catcccggac aaagccaatg
      241 tctacccggc caatttatcc ggcggccaac aacagcgcgt ggccatcgcc cgcgccttgg
      301 cgatgaagcc gagcatcatg ctgttcgacg agcccacctc cgctttggat cccgagatga
      361 tcaacgaagt cctggaggtc atgaccgatc tagcgcgcga cggcatgacc atgatcgtgg
      421 tcactcacga gatgggcttt gcccggcggg ttgcccatca ggtcgttttt atggaccagg
      481 gccaggtgat tgaaaccggc gaaccggaaa aattttttgc cgcgccggaa tcgccgcggg
      541 cccaacaatt tttgagcaag attctttcac attgaggaga attgtatgaa gagcctatta
      601 ctgtcagccc tcgtcgccgt ctgcttggtt gccgctgtcg gttcggctca ggcccagagc
      661 acactcgaaa aaatcgataa gtccggcacc ttgatcatcg gcacgcgcac cggttcgccg
      721 cccttcgcct atgtcaacaa gaataatgaa tgggtgggat tttccgtcga cctggtggaa
      781 aggacaatcc taccggggct cagcaaaaaa ctgaacaagc aaatcaaact cgaaaagaaa
      841 gagtcggcgc cgcagacacg cattcccttg ctcacttcca atgccgtcga cttgatcgcc
      901 gaaaccatga ccgacacgca atcgcgccgc gacaacgtcg acttcagcct gacgttcttc
      961 gtcaccggcg cccagtttct agtcaagaaa gggagcccga tcaaaaacat ccaaaccatc
     1021 gctggacggc gcatcgcggc gcagcagggc tcgaccaacg ccaagatcat tcgcgagcgc
     1081 gtgcccaacg ccaagctgct cgaatttccc gatcagccgg cggcctttca agcgctcgcc
     1141 caagggcagg taaatgccta caccaacgac ggcattcagc tcgccggctt gcgcgccaaa
     1201 gcgccgaagc cggaggactg ggctgtcgtc ggcgagtttt tttcctacga gccctacggc
     1261 atggcgatgc gcaaaaacga ctccgacttc cgccaagcag tcaacgtcgg cttgatggac
     1321 gctatctcat ccggcttgta ctttgagatc tacgacaagt ggttcggtcc caagggcgaa
     1381 gttccctatc cactcaccgc cgacaccaag cgcttcctgc agatgcaagt cgtgcctaag
     1441 taagaaaagg cgcgagcaac aggcgtgagg cgtgagtagg aaacgacaaa atcccttgct
     1501 tactctcgcc tttcgcctcg cgcctcatgc ctccttctca aaatgaatta ccaattcgac
     1561 tggagcgtgc tctggagcgg gcaatccggc agttggctgc tgcaggggtt gctcaccact
     1621 ctggaaatct ctctcttggg ctggctgctc gcggttttgc tcggcatttt ttccggtacg
     1681 ctgcgcaccg cgccgctacc gccgttaagg tggctcgccg ccgcctacgt ggagtttttt
     1741 cgcaacgtgc cgctgctggt ttggatgttt ctctggtatt ttggcgtgcc gccgctgctg
     1801 ccgcagacga tccaagagtg gttgttcgaa cacgccgcgg aattttgggc gggcgtgctg
     1861 gcgctcggag tctatcatgg cgcgcgtttc gccgaagtca ttcgagctgg catccagtcg
     1921 ataccgaaga cgcaattcga agcggctgtt tcgaccggtc ttacggcggc gcagtcctat
     1981 cgcttgatta ttctcccggt cgcgttgcgt ctgatcgtgc cgccggcgac gaatgaaagt
     2041 ctgaacctga taaagaactc ctccgtcgct ctgaccatcg gcgtcgccga gctaaccttt
     2101 caaacacgtc agatcgaaac ctacacggca aaggcgtttg aagcgctggc cgccggaact
     2161 gtgatttact tagtcgtctg cgtcgcgatc agcgcgctga tggcgcgcgt cgagcgactg
     2221 gtggcgatcc cgggaatgat cgtccgcggc cgagtcggag aatcttgaaa tggatctcca
     2281 ggtcatcgtc aataattttt cttttctcat tctccagggt tttttcggca tcggcgcctt
     2341 cgccggcggc acgctgcgct tggcgctgcc agcgatcgtt ctaggcttcg tcctcggcac
     2401 tttcatcggt ttggcgcgtc tggcgcgcac ccgctggctg aacttgccgg cgacgatcta
     2461 cgtggaattc ttccgcggcg tgccgctggt catggtgatt ttctggttct ggttcatcat
     2521 cccgacgttg ttgggcagat ccctgccgga atacagcgtc gctctcaccg
//
LOCUS       DATIRS010000903         5791 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_656819, whole genome shotgun sequence.
ACCESSION   DATIRS010000903 DATIRS010000000
VERSION     DATIRS010000903.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 5791)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5791)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5791
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_656819"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(289..1224)
                     /locus_tag="VLM90_11395"
     CDS             complement(289..1224)
                     /locus_tag="VLM90_11395"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HSQ13621.1"
                     /translation="MASAKGGKAETAKHGKDDKPRVITKKCRLTHGGGHHGGAWKVAY
                     ADFVTAMMALFLVLWLLGASNSKEKAVIAHYFREPGVFSGSRGIIPHGGQDKLGEGII
                     QAPTMEVLHANIKEGLLQLKQSLNVTDQVPITITADGLLIEMIDKEKQAFFEVNSDDI
                     KPIMRKILSLIAKEIKDTPNLLIVAGHTDSRGFHNDSFYSNWELSSARALNTRRDLEE
                     LGIASQRFEQVVGYADRKLRRPNDPLAAENRRISILIKNVDKHSASISEEKSTTKAAD
                     KARAEKSEAKTTEKTHAEKSTVKPAEKAHDAKAAH"
     gene            complement(1231..2088)
                     /gene="motA"
                     /locus_tag="VLM90_11400"
     CDS             complement(1231..2088)
                     /gene="motA"
                     /locus_tag="VLM90_11400"
                     /inference="COORDINATES: protein motif:HMM:TIGR03818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor stator protein MotA"
                     /protein_id="HSQ13622.1"
                     /translation="MFAIIGYAIVFGSVLGGFVIEGGAVGILVQPVEFLIICGAALGA
                     LIIGTPIKTIKAMIASIMNAIMKNGYSKADYMELFAMMFEMFSVMRKSGEMAMEKDVD
                     DPANSEIFKKYPKFMANHAAKGMLLDSLRLVISGSANAEELDNLMDEEIATHEEEGKR
                     PIEVLTKTADAMPGLGIVAAVLGVVIAMGVMDQGPEVLGHKIAVALVGTFIGILVSYA
                     MLQPLCQKMELLLVEEEKYLQCIKSGVLAYLHGAAPIIAVEHARRGVFSTERPGAQEL
                     EDACRGKKE"
     gene            2224..3639
                     /locus_tag="VLM90_11405"
     CDS             2224..3639
                     /locus_tag="VLM90_11405"
                     /inference="COORDINATES: protein motif:HMM:NF020252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDOD domain-containing protein"
                     /protein_id="HSQ13623.1"
                     /translation="MDRAPRFADQIREEVLRRSVTPLVSRLVETIENERAPLRSLEAL
                     IKASPVFSTRLALLTNLAKGASPRLAAVSQATGAIGLDYLKPLILGLLAYEAKPLGPS
                     HREVDPDPTTLRDLWEHALASAMIAAKIATRLANVSPLQAFTAGLIHDIGRVLLWRYS
                     NVEFAAAVALARQQLPIVQAEESAIGIDHAAMGDAWCGKCEIAAPLAELVRRHHEPLT
                     ALNATGGAGVPRLIAIVQAAESLSATAPLGLNDEGLPECTDAWSSLGLSKAQWTETKQ
                     IVKADIENLRDAFGFRRFDRAKPEFNRREISLPTPPVPAPTFNPSLAGHGRVIPFPMS
                     AEAARRFEARTPAEKLVLLVVEDHGTLCEMASLFLMRCGYQVRTASNGGVALEILARD
                     EIHIVLLDLMLPRVDGFEVLRQIHKSRQEMLPYLIVVSTGASDHDRRKVLDLGANEYL
                     PKPFQLARLLERVQAVEKYLL"
     gene            3839..4357
                     /locus_tag="VLM90_11410"
     CDS             3839..4357
                     /locus_tag="VLM90_11410"
                     /inference="COORDINATES: protein motif:HMM:NF015693.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body-associated FliL family
                     protein"
                     /protein_id="HSQ13624.1"
                     /translation="MKKIIIIVVGVLVLLGGGGAAVYFLKPDLLPAAIRPQDKDAEHA
                     KAEGEEEKAGGEKKDKKKKAGKKDEHAREAGADLDVFVVNLAGAGAPRYLRTLLSLGI
                     KDEHDKEKIKELSGKIRHAVIMYLSERKAEELGDPAGKNKLRDELQKLIAEAIDDDQL
                     VTNVYFKEFLIQ"
     gene            4366..4671
                     /locus_tag="VLM90_11415"
     CDS             4366..4671
                     /locus_tag="VLM90_11415"
                     /inference="COORDINATES: protein motif:HMM:NF016250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliO"
                     /protein_id="HSQ13625.1"
                     /translation="MFPFSSKNSREGRRDAGGLSGYAAVLQRLLPALRRRGNLGNALE
                     HLGSLPLTAQSSLALVRLQGETLLLGITPQSITLLTKGSAAAAGAPAPVQPRELGTP"
     gene            4668..5339
                     /gene="fliP"
                     /locus_tag="VLM90_11420"
     CDS             4668..5339
                     /gene="fliP"
                     /locus_tag="VLM90_11420"
                     /inference="COORDINATES: protein motif:HMM:NF009438.0"
                     /note="The bacterial flagellar biogenesis protein FliP
                     forms a type III secretion system (T3SS)-type pore
                     required for flagellar assembly; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
                     /protein_id="HSQ13626.1"
                     /translation="MNPSAFALLTGPIKGTEMSAAMEIMILLTVLSLGPLILVTLTSF
                     TRIVIVLSFLRQAMGTQQSPSNQIIIALSLFVSFHVMAPVWQKIDAEAVTPYYKKEIQ
                     PQAALERAWAPLREFLFKQTRKADLALFTEIAGNQEVDPAQVPASSVIPAFVISELKT
                     AFQMAFLIYVPFLILDLVVASILMSMGMMFLPPVLVSLPFKLVLFVLVDGWNLLVGSL
                     VRSFV"
     gene            5336..5605
                     /gene="fliQ"
                     /locus_tag="VLM90_11425"
     CDS             5336..5605
                     /gene="fliQ"
                     /locus_tag="VLM90_11425"
                     /inference="COORDINATES: protein motif:HMM:NF013480.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FliQ"
                     /protein_id="HSQ13627.1"
                     /translation="MTPEGLIDILRNSLQVAAMVCAPTLLFGLIAGVAVSIFQATTQI
                     NDMTLVFVPKAVATVLALVLFGSWMLQMYLDFTRQIILRLPTMIG"
BASE COUNT         1138 a         1644 c         1677 g         1332 t
ORIGIN      
        1 aattcaacgt aattaaggtg tgatcggagg caaataaccc gacgccggga gcacccttct
       61 gtaaaaagaa gttgtcgacc gcaaactcac ggtgatcaga gcggtctata agctcaagac
      121 cggcgaaatg tgccggctgc attagcttct acgtaaactg aaatagattt ttcacgacat
      181 aggacacgaa ggtttcggtt caataatatt ccgaacttgc tgcttttcgt gtccttcgtc
      241 gtgataaccg atctgcttat ttcgctgcta tggtcgacat ccgcgctctc agtgcgcggc
      301 cttcgcgtca tgggcttttt ccgctggttt cactgtggac ttctcagcat gggttttctc
      361 ggtggttttc gcctcagact tctcggctcg cgccttgtca gccgctttgg tagtggattt
      421 ttcctcgctg atgctcgcgc tatgcttgtc aacgttttta attagaatac tgatgcggcg
      481 gttctcggcg gcgagtggat cgttgggccg gcgcaactta cgatcggcgt agccgacgac
      541 ttgctcgaaa cgctgcgagg cgataccgag ttcttcgaga tcgcgccggg tgttgagcgc
      601 ccgcgccgag gacagctccc aattggaata aaacgaatcg ttgtgaaagc cgcgcgagtc
      661 ggtgtggccg gcgacgatca acaaattagg cgtatctttg atctctttgg cgatcaagct
      721 caaaatcttg cgcatgatcg gtttgatgtc gtcgctattg acttcgaaga atgcctgttt
      781 ctctttgtcg atcatttcaa tcaacaagcc atcggcggtg atcgtgatcg gcacttgatc
      841 ggtgacgttg aggctctgct tcaactgtaa caaaccttct ttgatattgg catgaagcac
      901 ttccatggtg ggcgcttgaa tgatgccttc gccgagtttg tcttggccgc cgtggggaat
      961 gatgccgcgt gaaccgctga atacgccggg ctcgcggaag tagtgggcga tgacggcttt
     1021 ttctttgctg ttggacgcgc ctaggagcca gagcacgaga aacagcgcca tcatggcggt
     1081 gacaaaatcg gcgtaggcga ctttccaggc gccaccgtga tggccgccac cgtgggtcag
     1141 ccggcatttt tttgtgatga ctctcggctt gtcgtctttg ccatgcttcg ccgtttcggc
     1201 tttgccgccc ttggctgacg ccatgtgaga ttactctttc ttgccgcggc aggcgtcttc
     1261 gagctcttgg gcgccggggc gctcggtgct gaaaaccccg cgccgggcat gttcgacggc
     1321 gatgatcggc gccgcgccat gcagataggc gagaacgccg gacttgatgc actggagata
     1381 cttctcttct tcgacgagca agagttccat tttttgacag agcggctgaa gcatggcgta
     1441 ggacaccaag ataccgatga aggtgccgac tagggcgacg gcgatcttgt gcccgagcac
     1501 ttccgggcct tggtccatga cgcccatggc gatgacgacg cctaagacgg cggcgacaat
     1561 gccgaggccg ggcatcgcgt cggcggtttt ggtcaaaact tcgataggcc gcttaccttc
     1621 ttcttcgtgg gtggcgatct cctcatccat taaattatca agctcctcgg cgttggccga
     1681 accgctgatg accaggcgca aggaatcgag gagcatgcct ttagccgcgt ggttggccat
     1741 gaattttgga tatttcttaa aaatctcgct gttggcggga tcgtcaacgt ccttttccat
     1801 cgccatttca ccgcttttac gcatcaccga gaacatttcg aacatcatgg cgaacagttc
     1861 catatagtcg gctttgctat aaccgttctt catgatggcg ttcatgatgc tggcgatcat
     1921 cgccttgatg gttttgatcg gcgtgccgat gatcaaagcg cccagggcgg cgccgcagat
     1981 aatcagaaat tcaaccggtt gcacgaggat gccgacggcg ccaccctcga tgacaaagcc
     2041 accgagtacc gaaccgaaga cgattgcata tccaatgatg gcaaacaaag gttcgtaacc
     2101 cctctttcag acatgggtcg aggccgttag ccccgattcc gctatgttga atcaatcgtc
     2161 aaagttcgcc gattctttaa caaaactaaa gattttcgcg cttagggccg atgcaaatta
     2221 cggatggata gagcacctag atttgccgat caaatccgcg aggaggtctt gcgccgctcg
     2281 gtcacgccgc tggtgtcacg gctggtcgag acgatcgaaa acgagcgcgc gcccctgcgc
     2341 agcttggaag ccttgataaa agcgagcccg gttttttcga cccggctggc gctcctgacc
     2401 aatctcgcca agggtgcctc gccccggcta gctgcggtct cacaagccac cggcgctata
     2461 ggcttggatt atctcaagcc gttgatcctc gggctgctcg cctatgaagc aaaaccgctt
     2521 gggccgtccc accgcgaagt cgatcctgac ccgacgacgc tccgcgacct atgggagcat
     2581 gctttggcga gcgccatgat cgcggccaag attgccacca ggctcgccaa tgtttcgccc
     2641 ctgcaagcct tcaccgctgg gttgattcac gatatcggcc gggtgttgct gtggcgctat
     2701 tccaacgtag agttcgccgc cgcggtagcg ctcgcgcgcc agcagctgcc aatcgttcaa
     2761 gccgaggaga gcgccatcgg tatcgaccac gccgccatgg gtgacgcttg gtgcggcaag
     2821 tgcgaaatcg ccgcgcccct ggccgaactg gtgcgccggc accatgagcc gttgacggcg
     2881 ctcaacgcga ctggcggtgc tggcgtgccg aggctgatcg ccatcgtcca ggccgcggaa
     2941 tcgttaagcg caacggcgcc cctcggcctg aatgatgaag gcttgccaga gtgcaccgat
     3001 gcctggtcgt cgcttgggct cagtaaagcg cagtggaccg agaccaagca aattgttaaa
     3061 gcggatatcg aaaacctgcg cgacgctttt ggttttcgcc gtttcgatcg cgccaagccg
     3121 gagttcaacc gccgcgagat ctctctgcca actccgccgg tgccggcgcc aacgtttaac
     3181 cccagcttag ccggccatgg ccgagtgatc ccgtttccca tgtcggctga agctgcgcgc
     3241 cgcttcgaag cgcgcacccc ggccgaaaag ctcgtcctgc tggtggtcga agaccatggc
     3301 acactgtgcg aaatggccag tctatttctc atgcgctgcg gttatcaggt gcgcacggcc
     3361 agcaacggcg gcgtcgcctt ggaaatcttg gcgagggacg agattcacat cgtgctgctc
     3421 gatttgatgc tgccgcgggt cgatggtttt gaggtgctgc ggcagattca taagagccgt
     3481 caagaaatgc tgccttacct catcgtggtt tccaccggcg catcggacca cgaccgcaga
     3541 aaagtgctcg atctcggcgc caacgaatat ctgcctaagc cttttcagct ggcgcgtttg
     3601 ctcgaacgcg tacaggcggt ggaaaagtat ctgctgtaac gctccccagt gcgttcgcgc
     3661 cagccttcat cccacatgcc gattatcgcc cgcgtcaaaa ctctgacgcg ggcatcggtg
     3721 ttgttgacgc cggccgccgg ttcgccctcg acgtaaaaca aaaattccaa ccattttcag
     3781 gccctagccc gtggcatgtc ggttgctgag ttactgttat cagcagcgag acaacgccat
     3841 gaaaaaaatc atcatcatag ttgtaggagt cctggtactg ctcggcggcg gcggcgcggc
     3901 agtgtatttt ctcaagcccg atctgttgcc cgcagcaatt cgcccgcagg acaaagacgc
     3961 cgagcatgcc aaggcggagg gcgaggaaga aaaagcaggc ggggaaaaaa aagacaagaa
     4021 gaaaaaggcc ggcaagaagg atgagcatgc gcgtgaagcc ggcgccgatc ttgatgtctt
     4081 cgtcgtgaat ctcgccggcg ccggcgcgcc gcgctatctg cgcaccctgt tgagcctcgg
     4141 catcaaggac gagcatgaca aggaaaagat caaggagctg tccggcaaga ttcgccacgc
     4201 ggtgatcatg tatctctccg aacgaaaggc tgaggaactg ggcgaccctg caggcaaaaa
     4261 caagctgcgc gatgaactac aaaaactgat cgccgaggcg atcgacgacg atcagctcgt
     4321 gaccaatgtc tatttcaagg aatttctcat ccaataggag tctgcgtgtt tccatttagt
     4381 tccaagaatt ctcgcgaggg acgccgggat gctggtgggt tgtcgggcta cgctgcggtg
     4441 ttgcagcggc tgctgccggc actacgccgg cgcggcaact tgggcaacgc gcttgagcat
     4501 ctcggcagcc tgccgttgac ggcgcaatcg tcgctggcgc tagtgcgctt gcagggggag
     4561 acgttgcttt tggggattac gccgcagagc attaccctgc tgaccaaagg gagcgccgcc
     4621 gcagcagggg cgccggcgcc ggtgcagccg cgcgagctgg gcacaccatg aacccatccg
     4681 ctttcgcgct tttgaccggt ccgatcaagg gcacggagat gtccgcggcc atggagatca
     4741 tgattctcct gaccgtgctt tctctcggtc ccctcattct ggtcacgctc acttcgttta
     4801 cccgcatcgt catcgtgctg tcgtttctgc gccaagccat gggcacgcag caatcaccgt
     4861 ccaatcaaat cattatcgcc ctctccttgt tcgtctcatt tcatgtcatg gcgccggtgt
     4921 ggcagaagat cgatgccgag gcggtgacgc cttattacaa aaaggaaatt cagccgcagg
     4981 cggccctcga gcgcgcctgg gcgccgttgc gcgagttctt gttcaagcag acccgcaagg
     5041 ccgatcttgc gttgttcacc gagatcgccg gcaaccagga agtcgacccg gcgcaggtgc
     5101 cggccagtag cgtgattccg gcgttcgtca tctccgaact caagaccgcc tttcagatgg
     5161 cgtttttgat ttacgtgccg tttctcattt tggatctcgt ggtcgcatcg atcctgatgt
     5221 ccatgggcat gatgtttctc ccgccggtgt tggtctccct gccgtttaaa ttggttctct
     5281 ttgttttggt cgacggttgg aacctgttag tcggttcgct ggtgcggagc tttgtatgac
     5341 cccggaagga ctcatcgata ttttgcgcaa ctccctgcaa gtggccgcca tggtgtgcgc
     5401 gccgacgctc ctgttcggcc tgatcgccgg cgtcgcggtg agcatttttc aggcgaccac
     5461 gcagatcaac gacatgacct tggtgttcgt gcccaaagcg gtggcgacgg tgttggcgct
     5521 ggttttattc ggctcgtgga tgctgcaaat gtatctggat tttacccggc aaattattct
     5581 gcgcctgccg accatgatcg gctgaaggcc gcgattttaa cgcctgtgac tgaacttaca
     5641 ctatgacatc cctggcccaa ctgattagtc agcactggct cgaagtcgtc accttcctgt
     5701 tgatctttgg ccgcgccatg ggagtgatct tgggcgcgcc gttctggggc agccatatgg
     5761 tgcccgtggc ggtgcgaatt tgggtcgcca t
//
LOCUS       DATIRS010000904         1669 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_853756, whole genome shotgun sequence.
ACCESSION   DATIRS010000904 DATIRS010000000
VERSION     DATIRS010000904.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1669)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1669)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1669
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_853756"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(12..992)
                     /locus_tag="VLM90_11430"
     CDS             complement(12..992)
                     /locus_tag="VLM90_11430"
                     /inference="COORDINATES: protein motif:HMM:TIGR02122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HSQ13628.1"
                     /translation="MRKIFHLAMAVFIFSVISPAYAQKVERLNFVGGPPSGVFGIFAT
                     GIGTYLSKNVPNLDVSVTATGGSVENIRRVNGGEAEMGLSFASDVHEAYFGQEQFKGK
                     PLTNIRAVGLVFFGVAHAITYADSGIRSVEDLAGKRVAVGTPGSGTFASAERVFRSLG
                     VWDKITRIPLLGAQAGEAMSDGKADAFFWTGPEPDRVTMEAATKKPVRAIDIYTPATK
                     TDFFKQYPYFARYVFPAGSYKGITEDTSTVGIPVIWYVNKDLSAPLVQKITEAAYNKD
                     GNAHMLKVHAGSKDMVPQRALQGVTFPLHKGAEDHWRAAGLQIPEAIRTK"
     gene            complement(1023..1643)
                     /locus_tag="VLM90_11435"
     CDS             complement(1023..1643)
                     /locus_tag="VLM90_11435"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase family
                     protein"
                     /protein_id="HSQ13629.1"
                     /translation="MTQSKQSAPHFYLNMDIDMSAVSKLRSEGKQQGEGNVPSINDFI
                     LHACAHALKDFPTLNASFSEAGIKLHGDINLGMAVALEEGLVVPVIRNADRLSLTELA
                     ARSRDLVDKAQKKKLFPLDYDGGSFTVSNLGMLGVDSFIAIINPPQCAILAVGRVAQR
                     VVAEDGMFAIRSLMTATLSADHRVVDGAIGARFLQQVKQVLEAGEF"
BASE COUNT          349 a          483 c          471 g          366 t
ORIGIN      
        1 aaccggcgaa gctacttggt gcgaatcgct tcgggaatct gcagcccggc ggcgcgccaa
       61 tgatcctcgg cacccttatg cagcggaaag gtcacgccct gcaaggcgcg ctgcggcacc
      121 atgtccttcg agccggcgtg aacctttagc atgtgggcgt tgccgtcctt gttgtatgcg
      181 gcttcggtga tcttttgcac caatggcgcc gacagatctt tattgacata ccagatcacg
      241 gggatgccga cggtcgatgt gtcttcggta atccccttgt acgaaccggc cggaaagacg
      301 tagcgcgcga aatagggata ctgcttgaaa aagtccgtct tggtcgccgg cgtataaatg
      361 tcgatggcgc ggacgggttt ctttgtcgcc gcttccatag tgacgcgatc gggctcggga
      421 ccggtccaaa agaacgcatc ggctttgccg tcgctcatcg cctcgcccgc ttgcgcgccg
      481 agaagtggaa tgcgagtgat tttgtcccaa actcccagcg agcggaagac gcgctcggcg
      541 ctggcaaaag ttcccgaacc tggagtaccg actgcgactc tcttgccggc caggtcctcg
      601 acgctgcgga tgccgctgtc tgcgtaggta attgcgtgag ccactccgaa gaagaccagg
      661 ccgacggcgc ggatgttcgt caacggtttc cctttaaatt gctcctggcc gaaataagct
      721 tcgtgcacgt ccgaggcaaa ggagagcccc atttcggctt cgccgccgtt cacgcgccgg
      781 atgttttcca ccgaaccgcc ggtggcggtg acactgacat ccaggttagg cacattcttc
      841 gacaaatagg tgccgatgcc cgtggcaaag atgccaaaca cgcctgaagg cggaccgccg
      901 acaaaattga gccgctcgac tttttgcgcg taggccggag agatcacgga aaaaataaaa
      961 acggccatcg ctaaatggaa tatctttctc atacgagcct cccttttttt aaccaattta
     1021 ttctagaact ctcctgcttc taaaacttgc ttgacctgtt ggagaaagcg cgcgccgatg
     1081 gcgccgtcga cgacgcgatg gtcggccgaa agcgtcgccg tcatcaacga cctgatcgca
     1141 aacatgccgt cttcggcaac gacgcgctgc gccactcggc cgacggcaag gatcgcgcac
     1201 tggggcgggt tgatgatcgc gatgaagcta tcgacgccga gcatgccgag attcgaaact
     1261 gtaaaagagc cgccgtcgta gtccaatggg aacaatttct tcttttgcgc cttgtcgact
     1321 aggtcgcggc tgcgcgcggc caattccgtg agactcaagc gatcggcgtt gcggatcacc
     1381 ggtaccacca atccttcttc gagggctaca gccatgccga gattgatgtc gccatgaagt
     1441 ttaatgcctg cttcggaaaa actagcattg agcgtcggaa aatctttcag cgcgtgggcg
     1501 caggcgtgga ggatgaagtc attaatcgac ggcacgttac cttcaccctg ctgtttaccc
     1561 tccgacctca gcttgctcac cgcgctcatg tcgatatcca tgttcaggta aaaatgcggc
     1621 gcgctttgct tgctttgggt catgcgctcg ccgcattttt acctgaaca
//
LOCUS       DATIRS010000905         2816 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_361977, whole genome shotgun sequence.
ACCESSION   DATIRS010000905 DATIRS010000000
VERSION     DATIRS010000905.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2816
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_361977"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(99..761)
                     /locus_tag="VLM90_11440"
     CDS             complement(99..761)
                     /locus_tag="VLM90_11440"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSQ13630.1"
                     /translation="MEPGDLLIQPNWVWHDHVNTSKEPIIWIDALDAGLVNYLDAHVF
                     REEWAEGKQQPLTRGHGAARRLYGPARQPKVDYEGAAGVPYHYKWQEALDALKELGEQ
                     GLQDPYDGLYIEYKNPIDGGHTFLTMTCYLQLLQPGQETRFHRHTGTAMYHAVQGRGV
                     TLVDKTDSVELQWDDHDSYTVPSWRWHSHKNLSQTEPAILFSFTDRPLLEMTGLDREE
                     LG"
     gene            complement(789..1121)
                     /locus_tag="VLM90_11445"
     CDS             complement(789..1121)
                     /locus_tag="VLM90_11445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13631.1"
                     /translation="MSKPAIKEPMDREHLHKRFAELGLRGYWQNERNQQRMEPRLWRW
                     KEIHPALMEATEVIRIGPDAFRRNIGLQTGSKTLAMGFQIVLPGEAAAAPRHTNTALR
                     FVVSGGGA"
     gene            1288..2259
                     /locus_tag="VLM90_11450"
     CDS             1288..2259
                     /locus_tag="VLM90_11450"
                     /inference="COORDINATES: protein motif:HMM:NF012904.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HSQ13632.1"
                     /translation="MVSAKDVQGVMAMMPSFSTKDAGELTAKNTIDVDNLKAGVDKMI
                     GDGIDVITTTGSFGECYNLSWDEYKTLAAAAVDAVKKRVPLFVGATSPNVREVVERLK
                     FVQDIGADGSLLGVPYYDAQSPDYMADFYSQIAEMFPKLAFLVYHNPVNHKVKIPVSV
                     FPRLVQCSNIVGMKDSHRDTREFLRLMEIIRGKISVMTNQAQMVPYYRMGSAGCWSID
                     AWMGPWPVLHLRNLVRAGKDQEAVAVIGDIMKAAGGERPGGNEGATAKLPIEFAGYVN
                     PGPARTPIVKFSDTAIERAKKKAEGWKALCAKYKPLVEAARVQAKVA"
     gene            2364..>2816
                     /locus_tag="VLM90_11455"
     CDS             2364..>2816
                     /locus_tag="VLM90_11455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13633.1"
                     /translation="MSFVPLIPKQAAIAVGDMVDNCAKVKPGMNVLLVAGNDGMYGGV
                     NIVDSETISWLQSAIVQRGADATVVWCDIPYRPMVLWGEGADPGKAWRVPKIVAAAMK
                     GADCIISNAVDLTFEEELRETADILEEHNIPYARNMATTGSLLTSNWGL"
BASE COUNT          582 a          778 c          854 g          602 t
ORIGIN      
        1 cggaaactgt gacggttatg ctgctcatgg aaatctccta ttggggagga gtataacgct
       61 ctgcgcgaac gaattctaag aatccccgat tggactacct acccaagttc ctcccgatcc
      121 agcccggtca tctccagcag cggccggtcg gtgaaagaga ataggatcgc aggctcggtt
      181 tgcgacaagt ttttgtgcga gtgccaacgc caagagggga cggtgtagct gtcgtggtcg
      241 tcccattgaa gttctacgga gtcggtcttg tctaccaacg tcacgccgcg gccttggacg
      301 gcgtggtaca tcgccgtgcc ggtgtggcgg tggaagcggg tttcttgtcc cggttggagc
      361 agctgcaagt agcaggtcat ggtgagaaag gtgtggccgc cgtcgatggg atttttgtac
      421 tcgatgtaca aaccgtcgta ggggtcttgg agcccttgct cgccgagttc tttcaatgcg
      481 tccaacgctt cctgccattt gtagtgatag ggaacgccgg cggcaccctc gtagtccacc
      541 ttcggctggc gcgccgggcc gtagaggcgg cgcgctgccc cgtggccgcg ggtcagcggt
      601 tgttgtttgc cctcggccca ttcttcgcga aaaacatggg cgtcgagata attgaccagg
      661 ccggcgtcca aggcatcgat ccagatgatc ggttccttgg aagtgttcac atgatcgtgc
      721 cacacccagt tgggctgaat cagcaaatca ccaggttcca ttaccatcgg ttagccgttc
      781 gacgtcgtct aggctccgcc gccggagacg acgaagcgca gcgcggtgtt ggtgtgacga
      841 ggcgcggcgg cggcttcgcc cggcaacacg atctgaaagc ccatggccaa cgtcttgctg
      901 ccggtttgta atccaatgtt gcggcgaaag gcgtcggggc cgatcctgat gacctcggtg
      961 gcctccatca acgcaggatg gatttctttc caacgccaca gccgcggctc catgcgctgc
     1021 tgattgcgct cgttctgcca gtagccgcgc agccccaatt cggcgaatcg tttgtgcaga
     1081 tgttcgcggt ccatcggttc tttgatagcg ggcttggaca tttttatcct ccggcgttca
     1141 aatcgttcaa accgttcaag tgtttcaaat cgttaactcg ctacggttgt agcaaattca
     1201 cgaatccggg cgcaactagg actttacaac ggcgccggtt tccagctatg actttaagaa
     1261 atattctcca attccaagga ggttctaatg gttagcgcaa aagatgtcca aggcgtgatg
     1321 gcgatgatgc cgtcgttttc aaccaaggat gccggtgaat tgacggcgaa aaataccatc
     1381 gatgtcgaca atctcaaagc cggcgtcgac aagatgatcg gcgacggcat cgatgtcatc
     1441 accaccaccg gaagtttcgg cgagtgttac aacctgagct gggacgagta caagaccctg
     1501 gcggcggccg ccgtcgacgc ggtgaagaag cgcgtgcctt tatttgtcgg cgccaccagc
     1561 ccgaacgtgc gcgaagtggt ggagcgcctg aaattcgtcc aagacatcgg cgccgatgga
     1621 tcgctgctcg gggtgcctta ctatgacgcg cagtcaccgg attatatggc ggacttctac
     1681 agccagatcg ccgagatgtt tcccaagctg gcgtttctgg tctaccacaa cccggtcaac
     1741 cacaaggtca agattcccgt gtcggtgttt ccgcgcttgg tgcaatgttc gaacatcgtc
     1801 ggcatgaagg acagccatcg cgacacccgc gagttcctcc ggctgatgga gatcatccgc
     1861 ggcaagatca gcgtcatgac caatcaggcg cagatggttc cctactatcg catgggctcg
     1921 gcgggctgct ggtcgatcga cgcctggatg ggcccctggc cggtgctaca tctgcgaaac
     1981 ttggtgcgcg ccggcaaaga tcaggaagcg gtcgcggtca tcggcgacat catgaaagcc
     2041 gccggcggcg agcgcccagg cggcaacgaa ggcgccacgg cgaagttgcc catcgaattc
     2101 gccggctatg tcaatcccgg accggcacgc acgccgatcg tgaaattctc cgacaccgcc
     2161 atcgaacggg ccaagaaaaa ggccgagggc tggaaggcgc tgtgtgccaa gtataaaccg
     2221 ttggtcgaag cggcaagggt gcaagcgaaa gtcgcataaa atttcgttca agagttcaag
     2281 agttccaggg ttcaatcggt cccagtccaa tttgaccttg aacccttgaa ccatgaactt
     2341 ttaactagtg ttttggagat attatgagct ttgttccgtt gattcccaaa caagccgcga
     2401 tcgccgtcgg cgacatggtc gacaactgcg ccaaggtgaa gccggggatg aatgtgctgt
     2461 tggttgcggg caacgatggc atgtatggcg gcgtcaatat cgtcgactcg gaaaccatct
     2521 cgtggctgca gtcggcgatc gtccagcgcg gcgccgatgc gacggtggtg tggtgtgata
     2581 ttccttatcg gccgatggtg ctttggggcg agggcgccga tcccggtaaa gcgtggcgcg
     2641 tgccgaagat cgttgccgcc gccatgaagg gcgcggactg catcatcagc aacgccgtcg
     2701 atttgacctt tgaagaagag ctgcgcgaga ccgccgatat tctcgaagag cacaatatcc
     2761 cgtacgcgcg caacatggcg acgaccggct cgctgctgac gagcaattgg ggactc
//
LOCUS       DATIRS010000906         1626 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1837205, whole genome shotgun sequence.
ACCESSION   DATIRS010000906 DATIRS010000000
VERSION     DATIRS010000906.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1626)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1626)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1626
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1837205"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1492
                     /locus_tag="VLM90_11460"
     CDS             <1..1492
                     /locus_tag="VLM90_11460"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HSQ13634.1"
                     /translation="NSVKIGIVLQIIALPSGIFISWLLARTNIYGAGLFEFGFWISFI
                     LPNLATTFGWMLLLDPSTGLVNNWLRHLPFGLNFDIYSFWGIIWAHVMANGISTKVML
                     MTPAFRRMDASLEEASRMSGASPLTTLLRITIPAMTPVIIVVFLLSVIRIFSSFETEL
                     LLGVPWGFYVYATKIVDLARQEPPLVNQAAALGSVILIFLVAFIPIQRRLIARRHFTT
                     VTGQFKPKIIELGVWRWPATIFVGFVVFLLDVVPILSVFGGSFMTRFGFFNLPKTWTT
                     EYWRMALSDPRILQGLQNTLIIAFSAAIFGAFFFSLVGYILVRTKFPGRGILDSICWL
                     PSAIPGVLSGLGLLWMFLGTPFFRPFYGTLFLLVIASVLGGITLATQILKSNFVQLGN
                     ELEEASRMSGAGFWRTYFKVVFPLMAQTMVLVAVLKFMFAAQQTSSIILLATSETRTL
                     SLLALDQVAAGYREVASITVIFIMLLTLGVALVARSFGLKVGIRAD"
BASE COUNT          266 a          486 c          451 g          423 t
ORIGIN      
        1 gaacagcgtc aaaatcggca tcgttttgca aatcatcgcg ctgccgtcgg gcatctttat
       61 ttcttggctg ttggcgcgga cgaacattta cggcgccggc ttgtttgagt tcggcttttg
      121 gatttccttc atcctgccca atctggcgac caccttcggt tggatgctgt tgctcgaccc
      181 gagcaccgga ctggtcaaca actggctgcg ccatctgccc ttcggcctga atttcgacat
      241 ctattcgttc tggggcatca tctgggccca tgtcatggcc aacggcattt ccaccaaagt
      301 catgttgatg acgccggcgt ttcggcgcat ggatgcatcc ttggaagagg ccagccggat
      361 gtccggcgcc agcccgttga cgactttgtt gcgcatcacc atcccagcga tgacgccggt
      421 gatcatcgtg gtgttcctgc tcagcgtgat tcgtattttc agcagcttcg aaaccgaatt
      481 attgctcggc gtgccctggg gcttttacgt ttacgccacc aagatcgtcg acctggcccg
      541 gcaagaaccg ccgctggtca atcaagcggc ggcgctgggc agcgtcatcc tgatttttct
      601 ggtggcgttc attccgattc aacggcgcct gatcgcgcgc cgccatttca ccacggtgac
      661 cggccagttc aaaccgaaga tcatcgagct cggcgtctgg cgctggccgg cgacgatctt
      721 tgtcggtttc gtggtgtttc tgctcgatgt cgtgccgatc ctgagcgtct tcggcggcag
      781 cttcatgacc cgcttcggtt ttttcaactt gccgaaaacc tggacaaccg agtattggcg
      841 catggcgctg agcgatccgc gcatccttca aggcttgcaa aacaccttga tcatcgcctt
      901 cagcgcggcg atcttcggcg cgtttttctt ttccctcgtc ggctacatct tggtgcgcac
      961 caagttcccc ggccgcggca tcctcgactc gatctgctgg ctgccgtcgg cgatccccgg
     1021 ggtgctttcc ggtctggggc tgctgtggat gtttctcggc acgccgtttt tccggccctt
     1081 ttacggcacg ctgtttttgc tagtcatcgc ctccgttctc ggcggcatca ctctggcgac
     1141 acagattctc aagtccaatt tcgtccagct cggcaacgaa ctcgaagaag cctcgcgcat
     1201 gtccggcgcc ggtttctggc gcacctactt caaagtcgtg tttccgctca tggcccagac
     1261 catggtgctg gtggcggtgc tcaagttcat gttcgccgcg cagcaaacct cgagcatcat
     1321 tttgttggcc acctcggaga cccgcacgct gtcgttgctg gcattggacc aagtcgcggc
     1381 ggggtaccgc gaggtggcga gcattaccgt gatcttcatc atgctgctga ccctcggcgt
     1441 ggcgctggtg gcgcgctctt tcggcctcaa ggtcggcatt cgggcggatt agcaaatgct
     1501 cgtattagga actgaattgt gagtttttta cggattcaaa atctctataa gaccttcggt
     1561 cagattgccg cggtcaaccg gattaacctc gatatcgcag aaggcgagtt ctttacattg
     1621 cttggc
//
LOCUS       DATIRS010000907         1875 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1640615, whole genome shotgun sequence.
ACCESSION   DATIRS010000907 DATIRS010000000
VERSION     DATIRS010000907.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1875)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1875)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1875
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1640615"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(94..1803)
                     /locus_tag="VLM90_11465"
     CDS             complement(94..1803)
                     /locus_tag="VLM90_11465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13635.1"
                     /translation="MADKRNKRIAATTVTQEELRLQEDRNCKANWKRWGPYLSERQWG
                     TVREDYSAQGAAWDYFPHDHARSRAYRWGEDGLGGICDRHQYICFALALWNGKDPILK
                     ERLFGLTGNQGNHGEDVKEYYFYLDSTPTHSYMKFLYKYPQAEFPYGRLVEENRRRGK
                     RDLEYELIDTGVFDDYRYFDVFIEYAKAGAEDILVRIEAINRGPEPAPLHLLPTVWFR
                     NTWSWGLDERRPRLRREVGAEIAAIKLAHYYYGNRWLYCEGAPQMLFSENETNYRKLY
                     STENESPYVKDSINDCVIHDKKDAVNPAQSGTKAAARYVKMVAPGESFTAQLRLTDAA
                     PGNGRSLDGDFAKAFAQRRAEADEFYRALIPEAVAPDRAAIMRQAAAGLLWSKQYYYY
                     DVNRWLKGDPAQPEPPPERARGRNREWRHLYNTDVISMPDKWEYPWYAAWDLAFHCVA
                     LAVVDSDFAKEQLLLMTREWYMHPNGQLPAYEWAFGDVNPPVHAWAAWRVYKVEMKRR
                     GEGDRKFLERIFQKLMLNFTWWVNRKDADGRNVFQGGFLGLDNIGVFDRCAPLPTGGH
                     IEQ"
BASE COUNT          335 a          533 c          580 g          427 t
ORIGIN      
        1 ggcgacatct tcataggcag ggttgtccct ggctaattcc aaagcgatgg ccagcatgtt
       61 caaacagtac atgcccatcc agctggtgcc gtcctactgc tcgatatggc cgccggtggg
      121 cagcggcgcg cagcggtcga agacgccgat attgtcgaga ccgagaaagc cgccttggaa
      181 gacattgcgg ccgtcggcgt ccttgcggtt tacccaccag gtgaaattca acatcagctt
      241 ttggaagatc cgttcgagaa acttccggtc gccttcgccg cgccgtttca tttcgacttt
      301 gtaaacccgc caggccgccc aggcgtgcac cggcggattg acgtcgccaa aagcccactc
      361 gtaggccggc agctggccgt tggggtgcat gtaccattcg cgagtcatga gcagcagctg
      421 ttccttggcg aaatcggagt cgacgaccgc cagcgcgacg cagtgaaacg ccagatccca
      481 agcggcgtac cagggatact cccatttgtc gggcatggag atgacgtcgg tgttgtaaag
      541 gtggcgccac tcacggttgc gtcccctggc gcgctcgggc ggcggctcgg gttgcgccgg
      601 gtcgcctttg agccagcgat tcacgtcgta ataataatac tgtttgctcc agagcagtcc
      661 ggcggcggcc tggcgcatga tggcggcgcg atccggcgcc accgcctcgg gaatgagcgc
      721 gcggtaaaac tcgtcggctt ccgctcgccg ttgggcaaat gccttggcga aatcgccgtc
      781 gagcgatctg ccgttgcctg gcgcggcgtc ggtcaggcgc agttgcgcgg taaaggattc
      841 tccgggcgcg accattttga cgtaacgggc cgcggctttg gtgccggact gtgccggatt
      901 gacggcatcc ttcttgtcgt gaatgacgca atcgttgatg ctgtctttga cgtagggcga
      961 ttcgttttcg gtgctgtaca gcttgcgata gttggtttca ttttcgctga agagcatttg
     1021 cggcgcgcct tcacagtaga gccaacgatt gccgtagtag tagtgcgcca gcttgatggc
     1081 ggcgatctcc gcgcccactt cacggcgcag ccgcggccgc cgctcgtcca agccccatga
     1141 ccaggtgttg cggaaccaga ccgtcggcag aaggtgcaaa ggcgccggct cggggccgcg
     1201 attgatcgct tcgatgcgca ccaggatgtc ttcggcgccg gccttggcgt attcaatgaa
     1261 gacatcgaag tagcgatagt cgtcgaagac gccggtgtcg atcagctcgt attccaagtc
     1321 gcgcttgccg cgtctgcggt tttcttctac caagcgtccg tagggaaact ccgcctgtgg
     1381 atacttgtag agaaatttca tgtaagagtg cgtcggcgtg gagtcgaggt agaaatagta
     1441 ttctttaacg tcttcgccgt ggttgccttg attgccggta aggccgaaga gacgctcttt
     1501 cagaattgga tctttgccgt tccatagcgc cagcgcgaag cagatatact ggtggcggtc
     1561 gcagataccg ccgagaccgt cctcgcccca gcggtaggcg cggctgcggg cgtggtcatg
     1621 gggaaaatag tcccatgctg cgccttgagc gctgtagtct tcgcgcaccg tgccccactg
     1681 gcgctcggat aaatagggcc cccagcgctt ccaattggct ttgcagttgc ggtcttcctg
     1741 aagtcttagc tcttcttggg tcacggttgt cgcggcgatt cgtttgtttc tcttatcggc
     1801 cattctaaca catcatctat ggctcggtct tgagatttgc agttcaagtc gttcaaaccg
     1861 ttggcaggaa cgttc
//
LOCUS       DATIRS010000908         3082 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_755858, whole genome shotgun sequence.
ACCESSION   DATIRS010000908 DATIRS010000000
VERSION     DATIRS010000908.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3082
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_755858"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..508
                     /locus_tag="VLM90_11470"
     CDS             <1..508
                     /locus_tag="VLM90_11470"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HSQ13636.1"
                     /translation="TASVVLALALQANSLWAQHIHPVPPSSAPVVGTAAIAFDLKTLD
                     GKAAGLETFRGKPLVINFFASWCDPCRDEMPLINELSAKAVGNYQVLGIAVEDSRAAV
                     SEYAKEAKLVFPIALDLNSTVKRAYRIFGPPATFFIDRQGIIRDIVIGPITSERAKEA
                     MKRLGVAK"
     gene            complement(582..725)
                     /locus_tag="VLM90_11475"
     CDS             complement(582..725)
                     /locus_tag="VLM90_11475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13637.1"
                     /translation="MAAIMMMIVLTSVRMISLRMIVVFPGGDFAAQRLLEKVVHPVRW
                     RRG"
     gene            1070..2008
                     /locus_tag="VLM90_11480"
     CDS             1070..2008
                     /locus_tag="VLM90_11480"
                     /inference="COORDINATES: protein motif:HMM:NF042462.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MbnP family copper-binding protein"
                     /protein_id="HSQ13638.1"
                     /translation="MSGKIFSRVLFSLGLFQALVQPFASAQENQPVRLRFAGAVNGTP
                     FECGKNYSNIGTTRSTITPSDFRFFVSAVELLTQEGKAVPLALDQDGVWQHENVALVD
                     LEDGSGPCGNGTKAIHAEVSGSAPSSNYSGVRFTMGVPFELNHGDPTVAPSPLNITAM
                     FWNWQGGYKFLKVDMNSVGLAAKPAMHQMAAGHGDKASQAQGGHGDGEASGFSVHLGS
                     TMCAAASRTESPSACKNPNRVSVTFNKFDLGKNVIVADLGAILRGANVDHNTPNTSPG
                     CMSFPKDADCPAVMSALGLAYDGVAPAAGQKFFSVK"
     gene            2017..>3082
                     /locus_tag="VLM90_11485"
     CDS             2017..>3082
                     /locus_tag="VLM90_11485"
                     /inference="COORDINATES: protein motif:HMM:TIGR04039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-heme enzyme"
                     /protein_id="HSQ13639.1"
                     /translation="MFQSKYFIVSVTAAFLTAAVTLAFPVDNAFHWELPAWVPPPRQP
                     ADNPATPAKVELGRHLFYDQRLSADETMSCATCHEQARAFTDGKKTAVGITGEVSKRN
                     SMALANVAYLPTLTWGNPQIESLEVQALIPVFGEHPVEMGMAGKEALLFERLKGEPIY
                     QKLFADAFSEQSRTSEAQLYSLSTVTKAIAAFQRTLLSFNAPYDHYKYGKDKTAISTS
                     AKRGEALFFGEKMECYHCHAGFNFTDNIQHSKLVFPEKGFHNTGLYNEDSKGAYPPGH
                     GGIGEFTGRDDDMGKFRTPSLRNVALTAPYMHDGSIASLEEVIRNHYAKKGRAVDAGK
                     PANLLRSYFIAGFQVSDAEVR"
BASE COUNT          682 a          924 c          839 g          637 t
ORIGIN      
        1 gaccgcgagc gttgttttag cgcttgcctt acaggcaaat agcctttggg cgcaacatat
       61 tcatccggta ccgccaagct cggcgcccgt ggttggcacc gccgctatcg ctttcgattt
      121 gaaaaccctg gacggtaaag cggcaggcct ggaaactttt cgcggtaagc cgctggtgat
      181 taatttcttt gccagctggt gcgatccctg ccgcgacgaa atgccgctca tcaatgaact
      241 gtcagcgaag gccgtcggca actatcaggt gctcggcatc gccgtcgaag acagccgcgc
      301 cgcggtcagc gaatacgcca aagaggccaa gctggtcttt cccatcgccc tcgatctgaa
      361 cagcaccgtg aaacgggcct atcgcatctt cgggccgccg gcgacatttt ttattgaccg
      421 ccaaggcatc atccgtgaca tcgtcattgg cccgatcaca tcggagcgcg ccaaagaggc
      481 gatgaagcga ctcggagttg ccaagtagtc atgacatgaa ggttctgcgc acccgcctat
      541 ccatactttc cgtcgtcgcc agcggattct tcgctgtctt tctagccgcg tcgccaccgc
      601 accgggtgca ccactttttc gagcagccgc tgcgcggcga aatcaccgcc ggggaacacc
      661 acgatcatgc gaaggctgat catcctcacg gaggtgagaa cgatcatcat catgatcgcg
      721 gccatcaacc tgagcgcgac gccggcgcga agcccgactg cgccctacag atagcggcgc
      781 agcatgccaa tctttcgctg tcgccgttgg tgacagttca gatcgccgca caagcgagca
      841 ctgactgcta ctcaacagtt ttcgctccgc gcaccagcca ctaccgatcc ccgtattcac
      901 cgcgcgcgcc gccaaacgcc agttgagcgc aatctctatc ggtcaagctc agtcgaatca
      961 ttacaacggt taacgtgacg gcaatttggt tgcgccaccc cagatgtggc gcgctttgcc
     1021 agctgcgttc gccttggtcc agttaaatga attttatttt ggaggactca tgtcaggaaa
     1081 gattttttcg cgagttctgt tctctttagg tttgtttcaa gcgctggtac agccatttgc
     1141 tagcgcgcag gaaaaccagc cggttaggct gcgctttgcc ggcgcggtca acggcacccc
     1201 gttcgagtgc ggcaagaatt attctaatat cggcaccacc aggtcgacga ttacaccgag
     1261 cgattttcgg tttttcgtgt cggcggtgga gttattgaca caggagggca aagccgtgcc
     1321 tctcgcgctc gatcaagacg gcgtttggca acatgagaac gtcgctctgg tggacttgga
     1381 agacggcagc ggtccatgcg gcaacggcac caaagcgata cacgccgaag tgagcggcag
     1441 cgccccgagc agcaattata gcggcgtgcg tttcaccatg ggcgtgccct tcgagttgaa
     1501 ccatggcgat cccacggtcg cgccgtcgcc gctcaacatc accgcgatgt tttggaactg
     1561 gcaaggcggc tataagtttc tcaaagtcga tatgaacagc gtcggcttgg cggcaaaacc
     1621 ggccatgcac cagatggctg ccggccatgg cgacaaagct agccaagccc agggcggaca
     1681 tggtgatggc gaagcgtccg gtttttccgt acacctgggc agcacgatgt gcgctgcggc
     1741 ttcgcggacg gagagtcctt cggcttgtaa gaatcccaac cgcgttagcg tgaccttcaa
     1801 caaattcgat cttggaaaga acgttatcgt cgccgacctc ggcgcgattc tgagaggcgc
     1861 caatgtcgat cacaatacac ccaacacgtc gcccggctgc atgagctttc ccaaagatgc
     1921 cgactgcccg gcggtgatga gcgcgctagg cctcgcctat gatggcgttg ctcccgccgc
     1981 tggacagaaa ttttttagcg tcaagtaaag aaatccatgt tccagagtaa atattttatt
     2041 gtcagcgtca cggccgcctt cttgacggcg gccgtgacgc tagccttccc ggtcgacaac
     2101 gcgtttcact gggaactacc tgcctgggtg ccaccaccgc gccaacccgc cgataatcca
     2161 gcgacgccag cgaaagtcga acttggccgc catctgtttt atgaccaacg tctatcagct
     2221 gacgagacca tgtcctgcgc cacctgccac gagcaggcac gcgctttcac cgacggcaag
     2281 aaaaccgccg ttgggatcac gggcgaggtc agcaagcgca actccatggc gctggccaac
     2341 gtcgcctatt taccgacgct cacctggggc aatccgcaaa tcgaatcact ggaagttcag
     2401 gcgttgattc cggtgttcgg ggaacacccc gtggaaatgg gcatggcagg caaagaagcc
     2461 ttgctcttcg agcgcttgaa aggcgagccg atttatcaaa aacttttcgc cgatgcgttt
     2521 tcggaacaat cacgaacgag cgaggctcaa ttgtattcct tgtcaacggt caccaaggcc
     2581 atcgccgcgt ttcagcgtac cttactatcg ttcaatgccc cctacgatca ttacaaatac
     2641 ggcaaggata agactgccat cagcacctcc gccaagcgcg gcgaagcgct cttctttggc
     2701 gaaaagatgg aatgctatca ctgccacgcc ggtttcaatt tcaccgataa tatccagcac
     2761 agtaaactcg tcttccccga aaaaggcttt cacaataccg ggctctacaa cgaagacagt
     2821 aaaggagcct acccgccggg acatggcgga atcggcgaat ttaccgggcg tgacgacgac
     2881 atgggcaagt tccggacgcc gagtctgcgc aatgtcgcac tgaccgcgcc ttacatgcat
     2941 gacggatcga tcgccagcct tgaagaggtg atccgtaacc actacgccaa gaaaggccgc
     3001 gccgttgacg ccggcaagcc ggccaatttg ctgcgcagct attttatcgc gggttttcaa
     3061 gtaagcgatg cggaagtccg cg
//
LOCUS       DATIRS010000909         2852 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_461038, whole genome shotgun sequence.
ACCESSION   DATIRS010000909 DATIRS010000000
VERSION     DATIRS010000909.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2852
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_461038"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2709
                     /gene="carB"
                     /locus_tag="VLM90_11490"
     CDS             <1..2709
                     /gene="carB"
                     /locus_tag="VLM90_11490"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: protein motif:HMM:NF003671.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HSQ13640.1"
                     /translation="GGNFAYNAAEFNEVVQAGLSISPVHEVLIEESVLGWKEFELEVM
                     RDHKDNVVIICSIENFDAMGVHTGDSITIAPAQTLTDKEYQIMRDASVRIIREIGVDT
                     GGSNIQFAVNPKDGRMTVIEMNPRVSRSSALASKATGFPIAKIAAKLAIGYTLDELRN
                     DITRETPACFEPTIDYVVTKIPRFTFEKFPQAKDLLTPQMKSVGEAMAIGRTFKESLQ
                     KAMRSLETGSFGFEPQVDLSEARRQQSLAIVQEKLKNPNSQRLWYVGDAYRLGMSTDE
                     IFQLSAYDPWFLEKIRELIATDKEIENCRGKLAELDAAVLRSWKEMGFADARIAKLVG
                     ATEAEIRAARKQLGVEAVFNAVDTCGAEFAAFTPYLYSTYEGEDESKRSPRKKIMILG
                     GGPNRIGQGIEFDYCCVHAAFALKEEDYETLMVNCNPETVSTDYDTSDKLYFEPLTME
                     EVMNIVDREKPDGVIVQFGGQTPLKLALALEHAGVPIIGTSPDSIDLAEDRERFSALI
                     NQLAIKQPDNGIARSYDEAFKIAEGLGYPVLVRPSYVLGGRAMQIVYDGAALQNYMTH
                     AVAVSPEHPVLIDKFLDDAIEVDVDALGDGEDYVIGGIMEHIERAGVHSGDSACSLPP
                     KTISRGVQNEIRGHTIALAKALNVRGLMNVQFAVQGDNVFVLEVNPRASRTVPFVSKA
                     IGVPLAKIAAKIMVGKKLKQLGLTREIVPAHISVKEAVFPFNKFPGVDTILGPEMKST
                     GEVMGIDNYFGMAFAKAQLGGGMRLPKTGRVFISVRDEDKEAAALLARRLYRVGFSIF
                     ATAGTANYFAEHKVPTEIVKKVQDGSPHIGDRIRVGDIAMVINTPEDSRSQADSFAIR
                     RYAVDYQVAYFTTMAGAEAATEGIELLKQSEFDVKALQDYAMPEVS"
BASE COUNT          653 a          801 c          833 g          565 t
ORIGIN      
        1 ggcggcaatt tcgcctacaa tgccgcagag ttcaacgaag tcgtgcaagc cggcctgagc
       61 atttcgccgg tccatgaagt attgatcgaa gagtcggtgc tcggctggaa ggagttcgag
      121 ttggaggtga tgcgcgatca caaggacaat gtcgtgatca tctgctccat cgagaatttc
      181 gatgccatgg gcgtgcatac cggcgactcg atcacgatag cgccggcgca gacgctgacc
      241 gataaagaat atcagatcat gcgcgacgcc tcggtgcgga tcattcgcga aatcggcgtc
      301 gataccggcg gctcgaacat tcagttcgcc gtcaatccca aagacggccg catgacggtg
      361 atcgagatga atccgcgagt gtcgcgcagc tccgccttgg ccagcaaggc gaccggattc
      421 cccatcgcca agatcgccgc caagctggcg atcggttaca ccttggatga gctgcgcaac
      481 gacatcacgc gcgagacccc ggcgtgcttc gagccgacca tcgattatgt ggtgaccaag
      541 attccgcgat tcacattcga aaaatttccc caggccaagg acttgctgac gccgcaaatg
      601 aaatcggtgg gcgaagccat ggcgatcggc cggacgttca aagaatcctt gcaaaaagcc
      661 atgcgctcgc tcgagaccgg ctccttcggc ttcgagcccc aagtggatct gtctgaagcc
      721 cgccggcagc aatccctggc gatcgttcag gagaagctca agaacccgaa ttcccagcgg
      781 ctttggtatg tcggcgatgc ttatcgtctc ggcatgagca ccgatgagat ttttcagttg
      841 tccgcctatg acccctggtt tctcgaaaaa atccgcgagc tcatcgcaac cgataaagaa
      901 atcgaaaact gccgcggcaa actagccgag ttggacgcgg ccgtgctgcg aagttggaaa
      961 gagatgggct ttgccgacgc gcgcatcgcc aaactcgtcg gcgctacgga ggcggaaatc
     1021 agagcggcgc gcaagcaatt aggcgtcgag gcggtgttca atgccgtcga cacttgcggc
     1081 gccgaattcg cagcgttcac gccctacttg tattcgacct acgaaggtga agacgaatcc
     1141 aagcgcagcc cgcgcaagaa gatcatgatt ctcggcggcg ggccgaatcg catcggccag
     1201 ggcatcgagt tcgactactg ttgcgttcat gccgcattcg ctctcaaaga agaagactac
     1261 gagaccctca tggtcaactg caatccggaa acggtcagca ccgattacga cacctcggac
     1321 aagctctatt tcgagccgct gaccatggaa gaggtgatga acatcgtcga ccgggaaaag
     1381 cccgacggcg tgatcgttca gttcggcggc cagacgccgc taaagttggc gctcgccttg
     1441 gagcatgccg gtgtgccgat catcggcaca tcgcccgaca gcatcgatct ggcggaggat
     1501 cgcgagcgct tctcggcgct gatcaaccaa ttagcgatca aacagccgga taacggcatc
     1561 gcgcgatcct acgacgaagc gttcaagatc gccgaagggc tcggctatcc agtgctggtg
     1621 cgtccatcct atgtgctcgg cggccgcgcc atgcagatcg tttatgatgg cgcggcgttg
     1681 cagaattaca tgacccatgc ggttgccgtc tcgcccgagc atccggtgtt gatcgataaa
     1741 tttctcgacg atgccatcga ggtcgatgtc gatgcgctgg gcgatggaga agactacgtg
     1801 attggcggca tcatggaaca tatcgagcgc gccggtgtcc actcgggcga cagcgcgtgc
     1861 agtctgccgc caaaaactat cagccgggga gtacagaacg aaatccgcgg ccacaccatc
     1921 gcgctcgcca aggcgctcaa tgtgcgcggt ttgatgaacg tgcagttcgc cgtgcagggc
     1981 gacaatgtat ttgtcctgga ggtcaatccg cgggcgtcac gcaccgtgcc ctttgtcagc
     2041 aaagccatcg gcgtgccgct ggccaagatc gcggccaaga tcatggttgg caaaaaactc
     2101 aaacagctgg gtcttacccg cgagattgtg ccggcgcata tctcggtgaa agaagcggtg
     2161 tttccgttca acaaattccc cggcgtcgac accatcctcg gacccgagat gaaatccacc
     2221 ggggaagtca tgggtatcga caattatttt ggcatggctt tcgccaaagc tcagttgggt
     2281 ggcggcatgc gtttgcccaa gaccggccga gtgtttatca gcgtccggga cgaagacaaa
     2341 gaagccgcgg cgttgctggc gcgaagactg taccgtgtgg gattttcgat tttcgctact
     2401 gccggcacgg caaattattt tgctgaacat aaggttccca cggaaatcgt caagaaagtt
     2461 caggatggca gcccgcatat cggcgatcgg atcagggttg gcgacatcgc catggtgatc
     2521 aacactcccg aagattcccg ttcccaagcc gactcattcg cgattcgacg ttatgccgtc
     2581 gactatcaag ttgcttattt cacaaccatg gcaggagctg aagcggcgac cgaaggcatc
     2641 gagctgctga agcagagcga attcgacgtt aaggcgctgc aggattatgc catgccagag
     2701 gtttcctagc ggcaatgcag cgcgtcgtca cggtcgtgga attacttgta ctactaagcc
     2761 tcgaaatttg cgcggcttgc gcaagtttgc cggtaacgag gactagaaca taggattgac
     2821 tctcgcaaag gcgcaaagct cgccaagttc gg
//
LOCUS       DATIRS010000910         2140 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_164860, whole genome shotgun sequence.
ACCESSION   DATIRS010000910 DATIRS010000000
VERSION     DATIRS010000910.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2140
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_164860"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1254)
                     /locus_tag="VLM90_11495"
     CDS             complement(<1..1254)
                     /locus_tag="VLM90_11495"
                     /inference="COORDINATES: protein motif:HMM:NF016232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSQ13641.1"
                     /translation="MNTEEIGLLLKQERGQFLEFISAFEYRRKSGQKKREEELSRELV
                     RVLSGMANADGGTVLVGVEPDKSVTGIPHDGDELQTLIQAPQNLLRPQLTPACEKVRL
                     GSLQLLKFEVASSMDIHRIAGGRSFYRIAAETPALPAEQIHSLKEAKRNVFYERQQTL
                     NATWFDLDTDLVSQFVNKLHPGQDPQTVLSQTYHLLDNSRAIPCPNMAALLLFAKEPT
                     RWHPRAGIDFVKYEGNERQHGASLNVVKRMRFEAPLVRLIDEAVGRIKEQVRGRTVLH
                     DLFFRERLEYPTFAWQEALVNAVAHRDYSLTGASVEVWMFDDHICVRSPGLPPAPVTL
                     EQLRLQKSIHFSRNPLIVRVLADLGFVRDMGEGVPRIYQEMETYGLHPPELSAEGFVL
                     TVTLRNAPVYDEATLRWLSQFANNQV"
     gene            complement(1359..>2140)
                     /locus_tag="VLM90_11500"
     CDS             complement(1359..>2140)
                     /locus_tag="VLM90_11500"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HSQ13642.1"
                     /translation="NGLPCSAVDVVFTICEEAGLIGAKCLDIASLRARTGLVLDSDSV
                     GFLFTRAPAANRMEFRVHGLEAHAGVCPEKGINAIQVAAEGIAQMQLGRIDHETTANI
                     GVVEGGMAVNIVPNQVVLKGEARSHDSDKLKRQTEHMQRCLEEAAARHSLEFDGKRHQ
                     ARVEAKIERDYDRMDVPESAPIVQLVHAAARNLHLDVKTRATGGGCDANVLNQKGLVV
                     ANLGTGMREIHTVNEWLDLKDLYLSAQMVLEVVRLNAAEIQ"
BASE COUNT          414 a          598 c          662 g          466 t
ORIGIN      
        1 gacttgattg ttggcgaact ggctcagcca gcgcagcgtg gcttcgtcgt agaccggcgc
       61 gttgcgcaga gtcacggtca aaacgaatcc ttcggcggaa agttccggcg ggtggagacc
      121 gtaggtctcc atttcttgat agatgcgcgg cacgccttcg cccatgtcgc gcacaaagcc
      181 cagatcggcg agcacgcgga cgatcaatgg attacgcgag aaatgaatgc ttttctgtag
      241 acgcaactgt tcgagcgtca ccggcgccgg cggcaagcct gggctgcgca cacagatgtg
      301 atcgtcgaac atccatactt ccacggacgc gccggtgagc gaataatcgc ggtgggctac
      361 cgcgttgacc agcgcttcct gccaggcaaa ggtcggatac tccaagcgtt cgcggaaaaa
      421 taaatcgtgg agaacggtgc ggccgcgcac ctgttctttg atccggccca ccgcttcgtc
      481 gatcaagcgc accagcggcg cttcaaagcg catccgtttg acgacgttga gcgatgcgcc
      541 atgctgccgt tcattaccct catacttgac gaagtcgatg ccggcgcgcg gatgccagcg
      601 cgtcggctct ttggcgaaca gcagcagcgc cgccatgttg gggcagggga tggcgcgcga
      661 gttgtcgagc aaatgatagg tctggcttaa caccgtctgg ggatcttgac cgggatgaag
      721 tttgttgacg aactggctca ccagatcggt gtcgaggtcg aaccaagtgg cgtttaaggt
      781 ttgctggcgc tcgtaaaaaa cgttgcgctt ggcttctttc agcgagtgaa tctgctcggc
      841 cggcagggcc ggggtttccg cggcgatgcg gtaaaacgaa cggccgccgg cgatgcggtg
      901 aatgtccatg ctcgaagcga cttcgaactt gagcagttgc aggctgccca agcgaacttt
      961 ttcacaggcg ggagtgagct gggggcggag caagttctgc ggcgcctgaa tcaaggtttg
     1021 cagctcgtcg ccatcgtggg ggatgccggt gacgctctta tcgggctcaa caccgactag
     1081 aaccgtgccg ccgtcggcat tggccatgcc ggataagacg cgcaccagct cgcgggaaag
     1141 ctcctcctcg cgttttttct gtccggattt gcgccgatac tcgaaggcgc tgatgaattc
     1201 gaggaattga ccgcgttctt gtttgagtaa aagaccgatt tcttcggtgt tcatgttttt
     1261 agacagtaag gattaaagag tgaagtgtaa agagtaagga gtcaggagca ataggcttca
     1321 atccgatact ccttactcct aactattgac tgaactcctt actggatttc ggctgcattg
     1381 agtctgacga cttcgagaac catctgtgcc gacagataga gatccttcaa atcgagccat
     1441 tcgttgaccg tgtggatctc gcgcatgccg gtgccgaggt tggcgaccac cagccctttt
     1501 tgattcaaaa cgttggcgtc gcagccgccg ccggtggcgc gggttttgac gtctagatgc
     1561 aaatttctcg cggcggcgtg aaccaactgg acgatggggg cgctttccgg cacatccatg
     1621 cggtcgtaat cgcgctcgat cttggcttcg acccgcgctt gatggcgctt gccgtcgaac
     1681 tccaacgaat gtctggcagc ggcttcttct aggcagcgct gcatatgttc ggtctggcgt
     1741 ttgagtttgt ccgagtcatg actgcgcgcc tcgcctttga ggacgacttg attgggcacg
     1801 atattcaccg ccatgccgcc ttcgaccacg ccaatgttcg ccgtggtctc gtgatcgatg
     1861 cggccgagct gcatttgcgc gatgccctcg gcggcgactt ggatcgcatt gatgcctttc
     1921 tctgggcaga ccccggcatg ggcttccagg ccgtggacgc gaaactccat gcggttggcc
     1981 gccggcgctc gggtgaacag gaagccgacc gagtcgctgt cgagcaccag gccggtgcgc
     2041 gcacgcaggc tcgcgatgtc caaacacttg gcgccgatca gcccggcctc ttcgcaaatc
     2101 gtgaaaacga cgtcgacggc ggagcagggc aggccgttct
//
LOCUS       DATIRS010000911         1683 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1739910, whole genome shotgun sequence.
ACCESSION   DATIRS010000911 DATIRS010000000
VERSION     DATIRS010000911.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1683)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1683)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1683
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1739910"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1406
                     /locus_tag="VLM90_11505"
     CDS             <1..1406
                     /locus_tag="VLM90_11505"
                     /inference="COORDINATES: protein motif:HMM:NF024938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HSQ13643.1"
                     /translation="MVEGIRRPNEFMVVAEQALQKGKPILAVKLGRSEMGKRQAISHT
                     GSLAGADEVFDAMCKRFGIVRCPTLEDMTEITLAFMLGRFPKGSRAAIVVNSGGMKGL
                     ICDHCDDLNTNLAQLSDKTKEAVRPLIPAELVVENPLECGVAGFGDEAGFINIVKLHA
                     EDPGVDLMAIHGELPRGQTRNAGLFKSVLEATDKPVLAFGRSTYSCTDESRAFQEEAG
                     MPFLQAIKPTLRALAGLGLYGERRNAGVPPLPAANGNPAVLDGEMLNKLLLSKGIGLP
                     KQLLADSAADAAARAKEIGFPVALKLIAADVVHKTESGAVVLGLKSADEVQAEGQKLL
                     AKTSGKAQLLVQEMVQGTEVLIGARTDPQYGPFLMVGLGGIFVEVLKDVSIRLLPVDE
                     KEARAMLKELRGYKVLEGVRGQGPRDVDGLVKAMVGLSEIFAAHRNSLSDMEINPIMV
                     RAQGGGVAAVDVRLVRK"
     gene            complement(1482..>1683)
                     /locus_tag="VLM90_11510"
     CDS             complement(1482..>1683)
                     /locus_tag="VLM90_11510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13644.1"
                     /translation="GISATHSTQEMFAGLTSLGLPNEAFARVYALRRDQPAPTHANLD
                     ALFRQYLSEIETVVGFSETTRP"
BASE COUNT          352 a          442 c          546 g          343 t
ORIGIN      
        1 tgatggtcga aggtattcgc cgccccaacg aatttatggt ggtcgccgaa caggcgctgc
       61 aaaaaggcaa gccaatcctg gccgtgaagc tcggccgctc ggagatgggc aaacgccagg
      121 cgatctctca cactggttcg ctggccggtg ccgacgaagt gttcgacgcc atgtgcaagc
      181 gttttggcat cgttcgttgc ccgacgctgg aagacatgac cgaaatcacg ttggcgttca
      241 tgctgggccg cttccccaag ggcagccgcg cggcgatcgt ggtcaactca ggcggtatga
      301 aaggcttgat ctgcgatcat tgcgacgact tgaacaccaa tctggcgcag ctgagcgaca
      361 aaactaaaga agcggtgcgt ccgctcatac cggctgaatt ggttgtcgag aatccgcttg
      421 aatgcggcgt cgccggtttc ggcgacgagg cgggattcat caacatcgtc aaactgcacg
      481 ccgaagatcc cggcgtcgat ctcatggcga tccacggcga actgccgcgc ggccagacga
      541 gaaacgccgg cttatttaaa agtgtgctcg aagcgaccga caagccggtg ctggcgttcg
      601 gccgttccac ctacagctgc acggacgaga gccgcgcctt tcaggaagaa gccggcatgc
      661 ctttcttaca agcgatcaaa ccgacgctgc gcgcgctggc gggattgggg ctttacggcg
      721 agcgcaggaa cgccggtgtg ccgccgttgc cggcggccaa tggcaatccg gctgtgctcg
      781 acggcgagat gctgaataag ctgctactga gcaaaggcat cggcttacct aaacaattgc
      841 tggcggactc agcggccgac gcagcggcgc gagctaagga aatcggcttt ccggtggcgc
      901 tgaaattgat cgccgcggat gtcgtgcata agaccgagtc cggcgcagtg gtgctcggtt
      961 tgaagagtgc ggatgaagtg caagccgaag gacagaaact gcttgccaag acttcaggca
     1021 aagcgcagtt gctcgtccaa gagatggtcc agggcactga ggtgctcatc ggcgcgcgca
     1081 ccgacccgca gtatgggccg ttcctgatgg tcggcttggg cggcatattc gtcgaagttc
     1141 ttaaagatgt ttctatccgt ttgctgccgg tggacgaaaa ggaagcgcgc gcgatgttga
     1201 aagaattgcg cggctataaa gttttggaag gcgtacgcgg ccaaggaccg cgcgatgtcg
     1261 atgggttggt gaaggcgatg gttgggctgt cggaaatatt cgcggcgcat agaaattctc
     1321 tgtcggatat ggagatcaac ccgatcatgg tgcgagccca gggcggcggt gtggcggcgg
     1381 tggatgtgcg gctggtgcgg aagtaggcat gcctcgcctc taggggattg gcttttagcg
     1441 cgaaaatcgg accacgtaag tttcctcaga gcgggattta gttacggacg ggttgtttcg
     1501 ctaaatccta ctactgtttc gatctcgctt aggtactgcc tgaacagcgc atccaaattc
     1561 gcatgggttg gcgcgggttg gtctcgtcgt aaagcgtata ccctggcaaa cgcttcgttg
     1621 ggtagtccca agctggtcaa gccggcaaac atttcctggg tcgagtgcgt cgccgaaatc
     1681 ccg
//
LOCUS       DATIRS010000912         4764 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_362698, whole genome shotgun sequence.
ACCESSION   DATIRS010000912 DATIRS010000000
VERSION     DATIRS010000912.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4764
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_362698"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(268..738)
                     /locus_tag="VLM90_11515"
     CDS             complement(268..738)
                     /locus_tag="VLM90_11515"
                     /inference="COORDINATES: protein motif:HMM:NF017353.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HSQ13645.1"
                     /translation="MNEDTFAGQWKQMRGSLKSWWGYLSDDDFEQIGGQKDKLIGKIQ
                     EKYGYSRETAQQEVERRFREAESAAGGKLSGAVAAVGELKDKAYEFGASAASKARDAQ
                     AGVASGLETAGSYLKTNDFENMAADLMGVVRKYPLQSTLIGAGLLYFMARNKHR"
     gene            complement(952..1275)
                     /locus_tag="VLM90_11520"
     CDS             complement(952..1275)
                     /locus_tag="VLM90_11520"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HSQ13646.1"
                     /translation="MFISKLKIRQALTSLVVIVALMSGCQAMTGSTAGQNVDDSTITA
                     SVKTKLATEKLSTLTRVEVDTVRAVVSLNGMVESAETRSRVEALVRQVDGVKGVRNNL
                     QVQQK"
     gene            complement(1752..3800)
                     /gene="ftsH"
                     /locus_tag="VLM90_11525"
     CDS             complement(1752..3800)
                     /gene="ftsH"
                     /locus_tag="VLM90_11525"
                     /inference="COORDINATES: protein motif:HMM:TIGR01241.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HSQ13647.1"
                     /translation="MQFIRRKLQRDSDAAPPDRLPPDISRPGAAKGSEKAKMPPSQTW
                     LWFLGALILNYLLVRLIFPPEGPITVPYTLFKAEVGRGNVAAIYSQGETITGRFKTTV
                     AYQSTDKKGATPSAEPQKAAKPAADAVAKTVSNFTTTLPTFVDAGLEKFLIDSGVEIS
                     AEPIDDGGSPWATFLFGFGPALLLIGFYVWLFRRAAQQGGGIGGGLMGIGKSKARRYD
                     QDKDLKVTFNDVAGIDEAENELVEIVDFLKDPKKYTRLGGAAPKGVLLIGAPGTGKTL
                     LAKAVAGEAGVPFFSMSAAEFVEMIVGVGAARVRDLFKQAREQAPAIVFIDELDAIGR
                     ARGQIAIGGSSEQEQTLNQILTEMDGFSSREGIIVLAATNQPEVLDKALLRPGRFDRR
                     VVVNLPDKTGREAILKVHTRAVPLANDASLAEIAAATPGLSGADLKNLVNEAALLAAR
                     REQNEVRHKDFLDALEKIVLGPERPLILSRADKERIAYHEGGHAILGLVVPGADPVNR
                     VSIVPRGQALGVTYQRPDSERYNYPEAYLRARIVGMLGGRAAEEIVYGTKTTGAESDI
                     EQATGLARQMVTRWGMSERLGLVQLAPRENPYLNSSNGYASARHFSENTAEAIDSEIL
                     KIIGESHDQAKRLLGAHRKQLDALVEALLARETLNEQEILDVTGLPRAPVLETGILPY
                     "
     gene            4110..>4764
                     /locus_tag="VLM90_11530"
     CDS             4110..>4764
                     /locus_tag="VLM90_11530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13648.1"
                     /translation="MASRLDRSNQDRPVIKARVERSLIRTQKAAEQLIALAGHLGERR
                     SAILQAWREAVQADPELTVVTALPRAQFNDHIPQVLDSFERKLRLWSRQESAAAQEQR
                     REDSATHGLQRWQQGYRLREVTREWGHLQLCLVTELENYTAAKTDLDPGVRATAILAV
                     TELCNEGIGESTTRYFQLQQLEAEGEVRDLQETLKEVIQLDRRRTELFHQAAHDLRGN
                     "
BASE COUNT          931 a         1405 c         1372 g         1056 t
ORIGIN      
        1 ggtccttcgc cacgcatgtt gaagacgttt cgcccgagga aatgcacaag cgcgcaacgg
       61 cccatcatag ttagccgacg cgtcgccgat taattctcag gcgactgata tcgtttacac
      121 agcagcgctg gtcttgcctc gagtgcgcgt ttctgctgac tttcgtagca ggtcgggatc
      181 atcgagtatc cgcgctctgg cgagctaact cgggcggact cgagaacgat ctttgtcgag
      241 ccgcccgagt gaaacggcag gtaagtctta tctgtgtttg tttcgcgcca tgaaataaag
      301 caggccggcg ccaatcaacg tcgattggag cgggtatttg cgcaccacac ccatgagatc
      361 agccgccata ttttcaaagt cgttggtctt caaataagag ccggcggttt ctaacccgct
      421 agcgacgccc gcttgagcgt cgcgcgcttt gcttgccgca ctggcgccaa actcgtatgc
      481 cttgtctttc agctctccca ccgccgcgac ggcacctgac aatttaccgc cggccgcgct
      541 ttccgcttcc ctgaaccggc gctcaacctc ttgttgggca gtctcccggg agtagccgta
      601 tttctcttga attttaccga tcagtttatc tttttgacca ccgatctgtt cgaagtcatc
      661 gtcgcttaaa taaccccacc atgatttcag gctgcctctc atttgtttcc actggccggc
      721 aaaagtatct tcgttcacgg ttcgatcctc ctataattaa aagttagttc tgatttctcg
      781 gaaaatatac caagctaagt agccaactag cgtaggccca agtagccgag aatgaacaat
      841 acgacaacca ccactccgat aatgtaaaaa atgttagatc ccatatggct ttgctcccga
      901 tgacggttct gtcaacgctt taagttgcgt caaactcgcc gttcgctaag gttatttttg
      961 ctgaacttgc agattgtttc tgacgccttt aacgccgtcg acctgacgaa caagagcctc
     1021 aactcgtgat cttgtttcgg cagactcaac catgccgttg agcgatacga cggcccgaac
     1081 tgtatcgact tcgacgcggg tgagggtcga cagtttctcg gtggccagct tagtcttgac
     1141 tgaggcggtg atcgtcgaat catcgacgtt ctggccggcg gtgctgccgg tcatagcttg
     1201 gcaacccgac atgagcgcga caatcacaac caggctcgta agagcttggc gaatctttaa
     1261 tttgctgatg aacatcatag tctccctttc attgctggtt aataagcggt catagatagt
     1321 tggctgaaag gagcaaaggc cattccaact cactgggcaa ttttatttgc cgcagggggc
     1381 aatttcgtcc taagtttggg attctcgcgg tgattttgtc tcaagctcga tacagcgaac
     1441 cgcgaatatt ttgtcaaacc gcttgcgcca atggggttcg gatcgtggat cgctgccgtt
     1501 gtagcttgtt agcgaactct gttcggcaac taaccgtcaa gtggctcagt tgaagcagaa
     1561 caccactggc agaaaccccc gcgatgggga cgcgctgggg tctctcgcca tccagacatt
     1621 gtcggctttg gctggcgatt gccgcggctc acgcgccgct ggagatggtt atgctcttcg
     1681 cggagtcgtg gccttgtcga tacgcgcgcc gcagttttat cggaggggta acgctcgcgt
     1741 ttctgctatt tctagtaagg caagatcccg gtctcgagaa ccggcgcacg cggcagcccg
     1801 gtgacgtcta ggatctcctg ttcgttgagg gtttcgcgcg ccagcagggc ttcgactaac
     1861 gcgtcgagtt gcttgcggtg ggcgcccaga aggcgcttgg cctggtcgtg gctctcgccg
     1921 atgatcttga gtatttcgct atcgatggct tcggcggtgt tctcgctaaa atggcgcgcg
     1981 cttgcgtaac cgttcgagct attcaagtag ggattttccc ggggcgcgag ctggaccaac
     2041 ccgagccgct cgctcatgcc ccaacgcgtg accatctggc gagccagccc ggtcgcctgt
     2101 tcgatatcgc tttcggctcc ggtggtttta gtgccgtaga caatctcctc ggccgcccgg
     2161 cctccgagca tgccgacgat ccgcgcgcgc aggtaagctt ccggatagtt gtagcgctcg
     2221 ctatccggcc gctgataggt cacgccgagg gcctggcccc gcggcacgat actcactcgg
     2281 ttcaccgggt cggcgccggg caccaccaga ccgaggatcg catgtccgcc ctcgtggtag
     2341 gcgatgcgct ccttatcggc gcggcttagg atgagcgggc gctcggggcc gagcacgatc
     2401 ttctccagcg catcgaggaa gtctttgtga cggacctcgt tctgctcgcg ccgggccgcc
     2461 agcagcgccg cctcgttgac cagatttttc aaatccgccc ccgagagtcc cggcgtcgcg
     2521 gcggcgatct ccgccaggct ggcatcgttc gcgagcggca cggcgcgggt atggactttg
     2581 aggatcgcct cgcgaccggt cttatccggc aggttaacca ctactcgccg gtcgaaacgt
     2641 ccgggacgca gcagcgcttt gtcgagcacc tcgggctgat tggtcgccgc cagcacgatg
     2701 atgccctcgc ggctcgagaa gccgtccatt tccgtcagaa tttgattaag agtctgctcc
     2761 tgctcgctcg agccgccgat cgctatctgt ccgcgggcgc ggccgatggc gtcgagctcg
     2821 tcgatgaaga cgatcgccgg cgcttgctcg cgtgcttgtt tgaacaggtc tcgcacccgc
     2881 gccgcgccca ccccgacgat catttcgacg aactcggccg cgctcatcga gaagaacggc
     2941 acccccgcct ctcccgcgac cgccttggca agcaaggttt tccctgtgcc cggcgcgcct
     3001 atcagcaaga cgcctttcgg ggcggcaccg ccgagacggg tgtacttttt tgggtctttg
     3061 agaaaatcga cgatctcgac cagttcgttc tcggcttcat cgataccggc gacgtcgttg
     3121 aaggtgactt ttaaatcctt gtcctggtcg tagcggcgcg ccttgctctt gccgatgccc
     3181 atgagtccgc cgccgattcc cccgccctgc tgtgccgcgc gccggaagag ccagacataa
     3241 aagccaatga ggagcagggc ggggccaaag ccgaacagga acgtagccca gggactgccg
     3301 ccgtcgtcga tcggttcggc gctgatctcg acgccgctat cgatcaaaaa tttctccaac
     3361 ccggcgtcga cgaaagtagg cagagtagtc gtgaagttgc tcaccgtttt ggccacggcg
     3421 tcggcagccg gcttggcagc cttttgcggc tcagcgctcg gcgtcgcccc ctttttgtcc
     3481 gttgactggt aggcgaccgt ggtcttgaag cggcccgtga tagtctcgcc ctggctatag
     3541 atcgccgcga cgttacccct gccgacttct gctttgaaca acgtgtaggg caccgtaatc
     3601 ggcccttccg gtggaaagat gagcctgacg agcaagtagt tgaggatcaa cgcgcccaag
     3661 aaccacagcc aagtttggct cggcggcatc ttggcctttt cggaaccctt ggcggcgcca
     3721 ggacgactga tgtccggcgg taaccggtca ggcggtgcgg cgtcggaatc ccgttgcagt
     3781 tttcgtctta tgaattgcat tctcacctcc tcggcggcgc ggcgggcgat atcaggcaac
     3841 gatacagcag catatagaaa cggctaccac tcgcgccgcc tcacaacaag ataaaataat
     3901 aatgaacggg ggattggaac tggaccatcg cttgattatt tttcggacag cggcggcatt
     3961 tcgatcgcat atctcgcctg gaacagtccg gcaaaggttt acttttttaa cagggttatg
     4021 cttagttaat gccgacgatt gaggttgcaa cacggtggag ttattcgtgg cgaccgtatc
     4081 cgagcacaag acacgagttg gaggaattga tggcatcccg tttagatcgg agtaaccaag
     4141 atcgtccggt tattaaggcc cgagtggaac gatcgctgat tcgaactcaa aaagccgccg
     4201 aacagctaat cgccctggct ggccacctgg gtgaacggcg gtcagccatt ttgcaagcct
     4261 ggcgcgaggc cgtgcaggcc gatccggaat tgaccgtcgt tactgcgctt ccgcgcgcgc
     4321 agttcaacga ccacatcccc caagtgttag actccttcga gcgcaagttg cgcctgtgga
     4381 gccgccagga gagcgccgca gcgcaagagc agcgaagaga ggactctgcc acccacggct
     4441 tgcagcgctg gcagcagggc taccgcttgc gcgaagtgac ccgtgaatgg ggtcatttgc
     4501 agttgtgctt ggtgaccgag ttggaaaact acacggccgc gaagaccgat ctggatccgg
     4561 gcgtgagggc gaccgcaatc ctggcggtga cggaactgtg caacgaaggc atcggcgaaa
     4621 gcacgacgcg ctacttccag ctgcagcaac tcgaggccga aggggaagtc cgcgacctgc
     4681 aagaaacgct gaaagaagtc atacaactgg accgccgtcg cacggaactg ttccaccagg
     4741 ccgctcacga tctgcgcggc aatg
//
LOCUS       DATIRS010000913         2667 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_558822, whole genome shotgun sequence.
ACCESSION   DATIRS010000913 DATIRS010000000
VERSION     DATIRS010000913.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2667)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2667)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2667
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_558822"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..241
                     /locus_tag="VLM90_11535"
     CDS             <1..241
                     /locus_tag="VLM90_11535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13649.1"
                     /translation="NLAEPLDFVTHDCAAVSIQDAAYRFCRYEPGVDVVLTGTGNPQH
                     LKANIESLARPPLPAPVQQRLKELFENIAGLTGNQ"
     gene            449..1480
                     /locus_tag="VLM90_11540"
     CDS             449..1480
                     /locus_tag="VLM90_11540"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ13650.1"
                     /translation="MIGKTRWFFLSIAAAIAVTVAVTAQAQDIYKDKTLTFIVGYSPG
                     GTYDQYTRLLARHIGKYLPGNPTRIVENMPGAGGIIAANHLYNRAKPDGLTIAAWASP
                     LILQHVMGNDAIKIDGRKVGWVGIPGPYDTACHFNSQSGVRTMDDWINAKRPMKISSI
                     GPGTSLSDVPKLLKAALNLPLEMVEGYKGGAEARIAVESGEVDGLCASWQATKVTWRS
                     QMEAGKIHVVLQATFKSHPELKKVPLAINYAKTEEAKTLLRVADNVHVYQFPFSTAPG
                     TPADRLQALQQAFVKTFRDRELVAEANKAQLEVEPIDGPTTAKTFAGLYDLNPALVAK
                     LKDILIPKK"
     gene            1552..2421
                     /locus_tag="VLM90_11545"
     CDS             1552..2421
                     /locus_tag="VLM90_11545"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ13651.1"
                     /translation="MKKVIVTGGSGKLGQFVIRDLLDHGYSVLSLDRVAPREKLCMSW
                     QVDLRHAGDLFEALRGGYGIIHLGAYQAPNLAPDAETLSNNVSATYNVLRGAADMGVK
                     RVVLASSTAAFGFIYASKLWAPKYLPADEAHPSTPQDSYGLSKVLGEQIADSIVSLQR
                     DMTVSSLRFPGVNFDLSYESFRDRWRNPASRACGFWTYIDARDAAMTCRLALEAKFKG
                     HEVFIASAAKNCMIQPTRELVKKYLPKGTRFKKTAGTHWSCVESSKARRLLGFKPRHL
                     WQDYLAEGREQKY"
BASE COUNT          572 a          718 c          801 g          576 t
ORIGIN      
        1 gaatcttgct gagccgttgg atttcgttac ccacgattgc gcggcggtgt ccattcagga
       61 tgcggcctac cggttttgcc gttacgagcc gggagtcgat gtcgttttga ccggaacggg
      121 caatccgcaa catctcaagg ccaatatcga gtcgcttgcg cgaccgccgc taccggcgcc
      181 ggtgcagcag cgattgaaag aactgttcga aaacatcgct ggtttgaccg gtaatcagta
      241 gttggcgtgg tgaaaccgag gaacgctatg gctgacctaa cgctgtgttc gatggcgagt
      301 gtgggcatca ccggcatcga gcgttggatg gcgcgagccc ggcgcattgc agattgcaga
      361 ttccacattg cagaattggc aacagcgatg gcaggctggc gtgagttgta gtaggtttcg
      421 gggagagagt gaattcacgg ggggagacat gatcggcaag actcgatggt tttttcttag
      481 catcgcggca gcgatcgctg ttactgttgc ggtcacagcg caggcgcaag atatttataa
      541 agacaagacg ctgacgttta tcgtcggtta ctcgccgggt gggacttacg atcagtacac
      601 gcggttgctg gcgcgccata tcggtaagta tttgccgggc aatccgacgc gcatcgtcga
      661 gaatatgccg ggcgcgggcg gcatcatcgc ggcgaatcat ctttacaacc gcgccaagcc
      721 cgatggcctc accattgccg cctgggcatc gccgttgatc ttgcagcatg tgatgggcaa
      781 cgacgcgatc aagatcgacg ggcgcaaagt cggctgggtc ggcatacccg gcccctacga
      841 caccgcttgt catttcaata gtcagagcgg cgtccgcacc atggacgact ggatcaacgc
      901 caaacggccg atgaaaatct cttccatcgg tcccggcacg agcctgtccg acgtgccgaa
      961 acttttgaaa gcggcgctca atttgccgct tgaaatggtc gaaggttaca aaggcggcgc
     1021 ggaggcgcgc atcgccgtcg agagcggcga ggtcgacggt ttatgcgcgt cgtggcaagc
     1081 gaccaaggtg acttggcgca gccagatgga agcgggcaag attcacgtgg tattgcaagc
     1141 cacattcaaa tcgcaccccg aattgaagaa agtcccgctg gccatcaact acgccaagac
     1201 cgaggaggcc aaaacgctgt tgcgtgtcgc cgataacgtc catgtctatc agtttccatt
     1261 ttccaccgca ccggggacgc cggccgatcg tctacaagcg ctgcaacagg ctttcgtcaa
     1321 aacctttcgc gatcgtgagt tggtcgcgga agcgaacaag gcacagttgg aagtagagcc
     1381 gatcgacggg ccgaccacgg ccaagacttt tgccggtttg tatgatctga acccggcgct
     1441 ggtggcgaag ttgaaagaca ttctaattcc gaagaaatag ctggctaatg tgcagtgcgt
     1501 tgagaagccc aggaaaacca atcgagccaa cgaactcgta aatcttcttc tatgaaaaaa
     1561 gttatcgtta ccggtggcag tggcaagttg gggcaattcg ttattcgtga tttgttggat
     1621 catggttata gcgtactcag tctcgatcgc gtcgcgccgc gcgaaaagct gtgcatgagc
     1681 tggcaggtgg acctgcgcca tgccggcgat ttgttcgagg cgctgcgcgg cggctacgga
     1741 atcattcatt tgggcgccta ccaagcgccc aacttggcgc cggacgccga gactctgagc
     1801 aataacgtgt cggcgactta caacgtgttg cgcggcgcgg cggacatggg tgtgaagcgt
     1861 gtcgtgctgg cgtcgagcac ggcggccttc ggctttatct atgcgagcaa actttgggcg
     1921 ccgaaatact tacccgctga tgaagcgcat ccctcgacac cccaagattc ctatggactg
     1981 tccaaagtat tgggcgagca gatcgccgat tcaatcgtct cgctgcagcg cgatatgacc
     2041 gtgagcagcc tgcgtttccc cggtgtcaat ttcgatctgt cctacgagag ctttcgcgac
     2101 cgctggcgca atccggcgag ccgcgcctgc ggcttttgga cttacatcga cgcccgcgac
     2161 gcggcgatga cctgccggct ggcgctggaa gcgaagttca aaggccatga agtgttcatc
     2221 gcttcggcgg cgaagaactg catgatccaa ccgacgcgcg agttggtgaa aaagtatctg
     2281 cccaagggca cgcgcttcaa aaaaaccgcc ggcacgcact ggagttgcgt cgagtcgtcc
     2341 aaggcacggc gcctgctcgg ctttaagccg cggcatctgt ggcaggatta tttagccgag
     2401 gggcgcgagc agaagtattg aagcgttgca tggcgccact ttccattttg tttccgaggc
     2461 gtcgcaccat tttccccacg gagatgggac tttttatttc cgcttgacgg agcaccggca
     2521 gttcaactag ctttgctgca gtcgctcatt cttttatctt agcttgacgg taaggagatc
     2581 caccatgatc agaagcttgc tgaccgcgat cgtcgtcata gtctggctat tcgccgtgac
     2641 tcagacgcag gcgcaaagcg atttttt
//
LOCUS       DATIRS010000914         2160 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_854749, whole genome shotgun sequence.
ACCESSION   DATIRS010000914 DATIRS010000000
VERSION     DATIRS010000914.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2160
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_854749"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..786)
                     /locus_tag="VLM90_11550"
     CDS             complement(<1..786)
                     /locus_tag="VLM90_11550"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HSQ13652.1"
                     /translation="MEFTIDSKIKLNDGHAIPRLGLGVWLISSGRSCESVVRAALDAG
                     YRHIDTAAFYGNEESVGKAVRDSGIPRGEIYLTTKLWNSDHGNPERALERSLGKLKMD
                     YVDLYLIHYPVPERLRSWRVLEGLRAGGKARSIGVSNFTIGHLTELLANSDTVPAVNQ
                     VELHPYLYQRELLDFCHKKNIVIEAYSPLTHGERLNDAKLVAIARNYSKSTAQILIRW
                     ALQHDVVVIPKSAKRERIIEDADVFGFTISAEDMRTLDGFNENL"
     gene            complement(798..>2160)
                     /locus_tag="VLM90_11555"
     CDS             complement(798..>2160)
                     /locus_tag="VLM90_11555"
                     /inference="COORDINATES: protein motif:HMM:NF014879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13653.1"
                     /translation="ALEVLAGNSLDTIIQKDGGFTQTPAISRVILTHNRGKKDRLADG
                     IVVTPSHNPPADGGFKYNPPDGGPADTDVTDWIQGRANDLLRDGNRGVKRIGYDAALK
                     ATTTHQVDLVSPYVDDLTAVIDMEAIGAQRVKIGVDPLGGAALGYWQKIAERYRFDLT
                     VVNAHIDPTFRFMTLDHDGKIRMDCSSPYAMASLVQLKDRFQVAFGNDADADRHGIVT
                     PARGLMNPNHYLAVAIHYLLSHRPLWNKSAAVGKTLVSSCLIDRVVESLDRKLFEVPV
                     GFKWFSPGLFDGSVCFGGEESAGASFLCKDGTVWTTDKDGIILCLLAAEMIATTGRDA
                     ASWYEELTGAMGKPFYTRVDLAATVAQKNALKALRPDSLTATELAGEPITAKLTHAPG
                     NGAAIGGLKVAAKSGWFAVRPSGTEDLCKIYAESLRSEAHLAAIKDQAAAIMQDVFTA
                     ANA"
BASE COUNT          431 a          663 c          597 g          469 t
ORIGIN      
        1 caagttttca ttgaagccat cgagcgtccg catgtcttca gcgctgatag tgaagccgaa
       61 gacatcggca tcttcgataa ttcgttctcg cttcgccgat ttcggaatga ccacgacatc
      121 atgttgcaat gcccagcgga ttagtatctg cgccgtcgat ttgctgtagt tccgtgcgat
      181 cgccaccagt ttcgcatcgt tgagccgctc gccgtgagtc agcgggctat aggcctcgat
      241 cacaatgttc tttttatggc agaaatccag caactcacgc tggtacaggt acggatgcaa
      301 ttccacctgg ttgacggcgg gaactgtgtc actgttggcg agcagctcag tcaaatgtcc
      361 gatcgtgaaa ttgctcacac cgatggagcg cgctttgccg cctgcgcgca agccctccag
      421 aacgcgccaa ctgcgcaacc gttccggcac tgggtaatgg atcaggtaga gatcgacata
      481 atccatcttg agcttgccga gactgcgttc cagggcgcgc tcgggattgc catgatcgct
      541 gttccacaat ttggtggtga gataaatttc gccgcgtgga atgccactgt cgcggacggc
      601 tttgccgacg ctctcttcgt taccgtaaaa cgccgccgtg tcgatatgcc ggtagccggc
      661 gtctagcgcc gcgcgcacca ccgactcgca gctcctcccc gagctgatca gccacacacc
      721 caaaccgagg cgcggaatag catggccgtc attgagttta attttagaat cgatcgtaaa
      781 ttccatgtcc cgttcgctta ggcgttggct gccgtgaaaa catcctgcat gatcgccgcc
      841 gcctgatcct tgatcgccgc taaatgcgcc tccgagcgca aactctcggc gtagatctta
      901 cacagatcct cggtacccga cggacgcacc gcgaaccagc cgctcttggc ggcgactttg
      961 aggccgccga tggcggcgcc gtttcccggc gcgtgggtga gtttcgccgt gatcggctcg
     1021 ccggcgagct cggttgccgt gagcgaatcc ggccttagcg ctttcaaagc atttttctgc
     1081 gccacagttg ccgccagatc gacccgggtg taaaaaggct tgcccatggc gccggtcaac
     1141 tcctcatacc aactcgccgc atcccgcccc gtcgtcgcaa tcatttccgc cgcgagcaga
     1201 cagagaatga tgccatcctt gtcggtggtc cagacggtgc cgtctttaca caggaaactc
     1261 gcgccggcgc tctcctcgcc accgaagcag accgagccgt cgaacagccc cggcgaaaac
     1321 catttgaagc ccaccggcac ttcgaagagt ttgcggtcga gactctcgac cacccggtcg
     1381 atcagacaac tgctaactaa ggttttgcct acggcagcgg atttgttcca cagcggccgg
     1441 tgcgacaaca aataatgaat cgccaccgcc aaatagtgat tgggattcat caggccacga
     1501 gcgggcgtga ctattccatg acgatccgcg tcggcgtcgt tgccgaaggc gacctgaaaa
     1561 cggtccttta attggaccag actagccatc gcatagggac tcgaacaatc catgcgaatc
     1621 ttgccgtcgt gatccaaagt catgaagcga aacgtcggat cgatatgcgc attgaccaca
     1681 gttagatcga agcgatagcg ttcggcgatc ttctgccagt agcccagcgc cgcgccgccg
     1741 aggggatcga caccgatctt tacccgttgc gcgccaatcg cttccatgtc gatgaccgcc
     1801 gtcagatcgt cgacgtaggg gctgactaaa tctacttggt gcgtcgtggt cgctttgagc
     1861 gccgcgtcgt agccgatccg tttgacgccg cgattgccgt cgcgcagcag gtcgtttgcc
     1921 cgcccttgaa tccaatcggt gacatcagta tcggccggcc cgccatccgg cggattgtat
     1981 ttgaagccgc cgtcggccgg tggattatgc gatggcgtga cgacaatgcc gtcagcgagg
     2041 cggtcttttt tgccgcggtt gtgcgtcaag atcacccgcg agatcgccgg cgtctgtgtg
     2101 aagccaccgt ccttctgaat gatcgtgtcg agagaatttc ccgccagcac ttccagcgcc
//
LOCUS       DATIRS010000915         1952 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1346231, whole genome shotgun sequence.
ACCESSION   DATIRS010000915 DATIRS010000000
VERSION     DATIRS010000915.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1952)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1952)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1952
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1346231"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..489
                     /locus_tag="VLM90_11560"
     CDS             <1..489
                     /locus_tag="VLM90_11560"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HSQ13654.1"
                     /translation="KIHRQGSLWKAVRASVSIPGIGPPAIENGEIFVDGGLVDNLPVA
                     AMKKLCQGQVFAVDVSEQAEFKSTLAQSYSVSGWKLLWQRLNPFVLTPDLPNILNTLY
                     RTTTVAGVRAIESAKAQADLCFEPPVSQFGVFDWHSVDAIIDAGYRYALDKLDATGSE
                     KT"
     gene            complement(499..1275)
                     /gene="phnC"
                     /locus_tag="VLM90_11565"
     CDS             complement(499..1275)
                     /gene="phnC"
                     /locus_tag="VLM90_11565"
                     /EC_number="7.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR02315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015416 - ABC-type phosphonate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015716 - organic phosphonate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter ATP-binding protein"
                     /protein_id="HSQ13655.1"
                     /translation="MNILEIRDLHTSYNDSVPVLRGVDLKIEKGEFVGVIGLSGSGKS
                     TLLRSINRLIEVNAGAIIAPAALLGGKSNGIIDILKLSRSRLRHVRCRIGMIFQQFNI
                     VKRLSVIDNVLSGGLGYQPAWRGTLRIFSQEERRRALVNLKRVGLLDHAYKRADELSG
                     GEQQRVAIARTLMQEPAIILADEPVSSLDPKLSRVVLDILKRVCREDGITAVVSLHTL
                     ELTREYADRVVGLKDGQILFDGATDELTDAIVDSIYGPID"
     gene            complement(1272..>1952)
                     /locus_tag="VLM90_11570"
     CDS             complement(1272..>1952)
                     /locus_tag="VLM90_11570"
                     /inference="COORDINATES: protein motif:HMM:NF024376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate/phosphite/phosphonate ABC transporter
                     substrate-binding protein"
                     /protein_id="HSQ13656.1"
                     /translation="RANKLDVAFLTPASYVLAKNETNVKVVLKSERQGIPSYYAAIIT
                     RADSGIKTLEDLRGKSFAFGDALSTTGHVFPRKMFKERGIDPVRDFKQVLYSGGHDAT
                     VLAVLNGKVDAGATYANSPDSKDTAWMRYLKNPEDINKIHAIAFSEPIPADNLVINGN
                     LDERLAKKIENVFVELSRDPQGKKMLRELYQIDGFVSATDKDYDSVRRAFVDAGIPLK
                     EALQKKKP"
BASE COUNT          399 a          555 c          570 g          428 t
ORIGIN      
        1 aagatacatc ggcaaggttc gttatggaaa gccgttcgtg ccagcgtgtc gatcccaggc
       61 ataggcccgc cggccattga gaatggtgaa atcttcgttg acggcggcct ggtcgataat
      121 cttccggtcg cggcgatgaa aaaactttgc caaggacaag tcttcgctgt cgacgtcagc
      181 gaacaagccg agttcaagag cacactggcg caaagctaca gcgtctcggg ttggaagttg
      241 ctctggcaac ggctcaatcc ctttgtcctc acacccgacc tgccgaatat tttgaatacg
      301 ttgtaccgca ccaccacggt cgccggcgtg cgcgccattg agagcgccaa agcgcaagcc
      361 gatctatgct tcgagccgcc agtcagccaa ttcggtgttt tcgattggca cagcgtcgac
      421 gccatcatcg acgccggcta tcgttatgcg ctggacaagc ttgacgcaac aggcagcgaa
      481 aaaacttgat ggccggagct aatcgatcgg cccatagatc gagtcgacaa tggcgtcggt
      541 gagttcgtcg gtggcgccat cgaaaagtat ctgcccgtct ttcaaaccca ccacccggtc
      601 agcgtactct cgcgtgagtt cgagcgtatg caagctcacc accgcggtaa tgccgtcttc
      661 gcggcagact cttttgagaa tatccaagac gacgcgcgac aatttcggat cgaggctgga
      721 aaccggttcg tcggccagga taatcgccgg ctcttgcatc aacgttcgcg cgatggcaac
      781 gcgctgctgt tcgccgccgg acagctcgtc ggcgcgtttg taggcatggt cgagtaaccc
      841 tactcgcttc aagttcacca gcgcacggcg tcgttcttcc tgggaaaaaa tccgcagtgt
      901 gccgcgccaa gccggttggt atcccaaccc gccggagagc acgttgtcga tgacgcttaa
      961 tcgcttgacg atgttgaact gctgaaagat catgccgatg cggcaccgca catggcgcag
     1021 tctcgagcga gaaagcttga gaatatcgat gatgccgttg ctcttgccgc cgagcagcgc
     1081 tgccggcgcg ataatcgcgc cggcgttgac ctcgatcaag cggttgatac tgcgcagcag
     1141 cgtcgacttg cccgaaccgg agagaccgat cacgccgaca aactcgccct tttcgatctt
     1201 gagatcgacg ccgcgcagca ccggcacgga gtcgttgtag gaagtatgga ggtcgcggat
     1261 ctcgaggatg ttcacggttt ctttttctgc agcgcttctt tgagcgggat gccggcgtcg
     1321 acgaacgccc ggcgtaccga gtcataatcc ttatccgtgg cgctgacgaa gccgtcgatc
     1381 tgataaagct cgcgcagcat ttttttgcct tggggatcgc gcgagagctc gacaaagaca
     1441 ttttcgattt ttttcgccag gcgctcgtcg agattgccgt tgatgacgag attgtccgcc
     1501 ggtatcggct cggagaacgc gatggcgtga attttattga tgtcttcggg atttttcagg
     1561 taacgcatcc acgccgtatc tttactgtcc ggcgagttcg cgtaggtagc gccggcgtcg
     1621 actttgccat tgagcaccgc cagcaccgtg gcatcgtggc cgccggagta aagcacttgc
     1681 ttgaaatcgc gcaccgggtc gatgccgcgt tccttgaaca tcttgcgcgg aaacacatga
     1741 ccggtggtcg acagcgcgtc gccgaacgca aagctcttgc cgcgcagatc ttcgagagtc
     1801 ttaatgccgc tgtcggcgcg ggtaatgatc gcagcgtaat aagagggtat gccttggcgc
     1861 tccgacttga gcaccacttt gacgttggtt tcgtttttag cgagcacgta ggacgccggc
     1921 gtcaggaacg cgacatcgag cttgttggcg cg
//
LOCUS       DATIRS010000916         1543 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1838086, whole genome shotgun sequence.
ACCESSION   DATIRS010000916 DATIRS010000000
VERSION     DATIRS010000916.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1543
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1838086"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..697
                     /locus_tag="VLM90_11575"
     CDS             <1..697
                     /locus_tag="VLM90_11575"
                     /inference="COORDINATES: protein motif:HMM:NF013614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SufD family Fe-S cluster assembly protein"
                     /protein_id="HSQ13657.1"
                     /translation="AAVVELVAHKDARIKYSMVQNWYPGDKEGKGGIYNFVTKRGKCL
                     GERSKISWTQVETGSAITWKYPSCILQGDDSVGEFYSVALTNNYQQADTGTKMIHIGK
                     NTKSTIISKGISAGHGQNTYRGLVKIMKGASGARNYSQCDSLLLGDQCGAHTFPYLEV
                     LNNASQVEHEASTSKIGEDQLFYCRQRGISNEDAVNLIVNGFCKQVFKELPMEFAVEA
                     QKLLGVILEGSVG"
     gene            722..>1543
                     /locus_tag="VLM90_11580"
     CDS             722..>1543
                     /locus_tag="VLM90_11580"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HSQ13658.1"
                     /translation="MDVYFDNNATTRVLPEVAAAMLPYYTEFYGNPSSIHRFGSDVGQ
                     KIARARAQVAALLGAADPVEVIFTSCGTEGDNAAIRGMLEARPDKRHIVTTKVEHSAV
                     LGLCQHLEKKGYRITWLSVDQDGALDLAELSAALSDDTALVSIMWANNETGVIFPIEK
                     IGALTRAKNIPLHVDAVQAAGKIPMNTSQLPVDLVTISGHKFHAPKGVGALYVRRGIT
                     FPPFLIGGHQERNRRAGTENVAGIIGMGFAAEIALGRRSEDRVRVTQLRDRLETLL"
BASE COUNT          341 a          409 c          464 g          329 t
ORIGIN      
        1 cgccgcggtg gtcgagttgg tcgcgcacaa ggatgcgcgg atcaaatatt cgatggtgca
       61 aaattggtat ccgggcgata aagaaggcaa gggcggcatc tataattttg tcaccaagcg
      121 cggcaagtgt ttgggcgagc gttcaaaaat atcctggacc caggtggaaa cggggtcggc
      181 gattacttgg aaatatccga gctgcatctt gcagggggac gattcggtcg gcgaatttta
      241 ttcggtggcg ctgaccaata attatcagca agccgacacc ggcaccaaga tgatccatat
      301 cggcaagaac accaaaagca cgattatctc caaggggatt tccgccggcc atggccagaa
      361 cacctatcgc ggcctggtga agatcatgaa aggtgccagc ggcgcgcgca attattcaca
      421 gtgtgattcg ttattgttgg gcgatcagtg cggcgcccac acgtttcctt atcttgaagt
      481 gttgaacaac gcgtcccagg tcgagcatga ggcatcgacg tcgaagatcg gcgaggatca
      541 gctgttctat tgccgccagc gcggcatctc gaatgaggac gcggtgaact tgatcgtcaa
      601 cggtttctgc aagcaagtat tcaaagaact gccgatggag ttcgccgtcg aggcgcagaa
      661 attgttgggg gtgattcttg agggcagtgt tggttaattg ccgagcgctt gcgtgaagcc
      721 tatggacgtt tacttcgata acaatgccac cacgcgggtg ctgccggaag tcgccgcggc
      781 gatgctgccg tactacaccg agttttacgg caatccgtcg agtatccacc gctttggtag
      841 cgatgtcggt cagaagatcg cccgggcgcg tgcccaagtg gcggctcttc tcggcgccgc
      901 cgatccggtt gaagtaatct ttaccagttg cggtaccgag ggcgataacg cggcgatccg
      961 cggcatgctc gaagcgcgac cggacaaacg tcatatcgtc actactaaag tcgaacattc
     1021 cgcggtgttg ggcttgtgcc agcatcttga gaaaaaaggc tatcggatta cctggctcag
     1081 cgtcgatcag gacggcgcgc tcgacttggc cgaattatcc gccgcgttgt ccgacgatac
     1141 cgctctagtt tcgatcatgt gggcgaacaa tgagaccggg gtgatttttc caatcgaaaa
     1201 gattggcgct ctcacccgtg ccaaaaacat tccgctccat gtcgatgcgg tacaagccgc
     1261 gggtaagata ccgatgaaca caagccaact acccgtcgat ttggtgacga tttcaggcca
     1321 taagtttcac gcgcccaagg gcgtcggcgc gttgtacgtg cgccgcggca ttacattccc
     1381 gccctttctg atcggcggcc accaagagcg caatcgccgc gccgggacgg agaacgtcgc
     1441 cggtatcatc ggcatgggct ttgccgccga gatcgcgctg ggtcgccggt ccgaggatcg
     1501 cgtacgggta acgcagctgc gcgatcgctt agaaacgctg ttg
//
LOCUS       DATIRS010000917         1812 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_658057, whole genome shotgun sequence.
ACCESSION   DATIRS010000917 DATIRS010000000
VERSION     DATIRS010000917.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1812)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1812)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1812
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_658057"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..533
                     /locus_tag="VLM90_11585"
     CDS             <1..533
                     /locus_tag="VLM90_11585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HSQ13659.1"
                     /translation="LDGELSGVALEHFETHLTECSECAGELRSQRQLLCTLDAAFSNS
                     ASIKLPENFTRVVATHAEHNLRGLREKSERRRALQLCALLAVTAFALLGAASGALVLQ
                     PARNSFRIVARLLEVLSQAVLEAAEGFAIVGRMIGRAAVASPYGFGAVIAFVFIGSIF
                     LLPRLIASYHRTQIIE"
     gene            758..1519
                     /locus_tag="VLM90_11590"
     CDS             758..1519
                     /locus_tag="VLM90_11590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HSQ13660.1"
                     /translation="MKEGAIAFGGDVIVEGTVEGDVASIGGSVVQRTGSRIGGDVIVI
                     GGVYHHDKSEQGRDPKSVTIMYAGYEEQLKRLMREPFSLLQPQFSAVFFGIRLLAILF
                     WFVIALALTAAMPNTVSRAVARLQLTSLRVAIIGLVGSIAITVGVFLCLLILPSVIGA
                     IVALLAFLLVIVATLFGRSVISAATGRWLQRRFFPKLKSESVTLLLGVTFWVIMASLP
                     YVCPMVVAGLLVTSLGLALTARYRLSWKKSESAKV"
     gene            1554..>1812
                     /locus_tag="VLM90_11595"
     CDS             1554..>1812
                     /locus_tag="VLM90_11595"
                     /inference="COORDINATES: protein motif:HMM:NF016430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor"
                     /protein_id="HSQ13661.1"
                     /translation="MQPAEQPTDDALVAAAGAGDETAFETLFNRHRRQVARIGGRFFA
                     QREQIEDIIQDTFTKLYFALHNYHGTHEASFKAWLAQITVNA"
BASE COUNT          344 a          522 c          523 g          423 t
ORIGIN      
        1 atcttgacgg cgagttgagc ggcgttgcgc tcgaacattt cgaaacacac ctaaccgagt
       61 gttcggaatg cgccggcgaa ctgcgaagtc agcgtcaact tttatgcacc ctggatgcag
      121 ccttcagcaa ttctgcaagc attaagcttc cggaaaactt cacgcgagtc gtggccacgc
      181 atgctgaaca caatctgcgc ggactgcgtg aaaaatccga gcgccggcgg gcgctgcaat
      241 tgtgcgcgct gcttgcggtc accgctttcg cactgctggg cgccgcatcc ggagcattag
      301 tgcttcaacc ggcgcgcaat tcttttcgca ttgtcgcgcg cttgctcgag gttctctcgc
      361 aagctgtgct ggaagccgcg gagggcttcg cgatcgttgg tcgcatgatt ggtcgggccg
      421 ccgtggccag cccgtacggt tttggcgcgg tgatcgcttt cgttttcatt ggctcaattt
      481 tcctgctgcc tcggttaatc gccagttatc accgcaccca aatcatcgaa taggagcgac
      541 acaagtcaaa aggcaaaagg caaaaggtaa aaggaaaaag gaaagagctc gcgtcctgaa
      601 ctttttcctt tttccttttg ccttttgcct tctgactctc gccgtccagg ctcagacggc
      661 agtccccgct ccgccggatc ccaatgctcg cgtcatcgaa ggcgtcaaca atggaactgt
      721 cttcggcatg ggacaatcga ttcgcattac cggcacggtg aaagaaggcg cgatcgcgtt
      781 cggcggcgat gtaatagtcg agggcacggt cgaaggcgac gttgcgtcga tcggcggctc
      841 agtcgtgcag cgaacaggct cgcgcatcgg cggcgacgtg attgtcatcg gcggcgttta
      901 ccatcacgac aaatcggaac agggccgcga tccgaaatcc gtgacgatca tgtacgccgg
      961 ctatgaggag cagctcaagc gactgatgcg cgagccgttt agcttattgc agccacagtt
     1021 ctcagccgtc ttcttcggca ttcggctgct ggcaattctg ttttggttcg tgattgcgtt
     1081 ggcgctgacc gccgcgatgc cgaacaccgt cagccgcgcg gtcgcgcgtc tgcaactgac
     1141 cagtttgcgg gtcgccatca tcgggctggt tggttcgatt gccataacgg tcggcgtgtt
     1201 tctgtgttta ctgattttgc cctcagtgat tggcgcaatc gtcgcgctac tggcgtttct
     1261 gctggtgatc gtggccacgc tcttcggccg ctcggttatt tcggcagcca ccggccgttg
     1321 gttacagcgc cgattttttc ctaaacttaa atctgagtcc gtcacgctgc tgcttggggt
     1381 tacgttttgg gtgatcatgg cctctctgcc atatgtgtgt ccaatggtcg tcgctggttt
     1441 gctggttacc agtctgggcc tggcgttgac ggcgcgttat cgcctcagtt ggaagaagtc
     1501 tgagtcggca aaggtttgat cgcgaccgac tgcccccgaa gagagcaacg attgtgcagc
     1561 ctgccgaaca accgaccgat gacgcgctgg tcgctgccgc gggcgccggc gacgaaaccg
     1621 cgttcgagac gctcttcaat cgtcatcgcc gccaggtggc gcgcatcggc ggccgcttct
     1681 ttgcgcaacg cgaacagatc gaagacataa ttcaggacac cttcacgaaa ctgtatttcg
     1741 cgctgcacaa ctatcacgga actcacgaag catcattcaa agcctggctc gcgcagatca
     1801 ccgtcaacgc ct
//
LOCUS       DATIRS010000918         2256 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1150321, whole genome shotgun sequence.
ACCESSION   DATIRS010000918 DATIRS010000000
VERSION     DATIRS010000918.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2256)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2256)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2256
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1150321"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(236..1279)
                     /locus_tag="VLM90_11600"
     CDS             complement(236..1279)
                     /locus_tag="VLM90_11600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13662.1"
                     /translation="MLKLIAAILLLLPQLAQAQKLEQIVAEAKKEGEVTLVASTSTFG
                     GKKGFTELENLFAKRYGFKAKLNLSGGPSFPQMAARIITEQKAGSKSSTDMYLGSDGT
                     FATMQEEKALEKVNWAGIFPWVTKEMEITPQESLLVYASFHGIIYNSNAIPKDKAPKS
                     YEDLIDPVLSRMWAGKMAIPAYIHWLVRLTPIWGKEKVLNFARKLAPLTGGRLRQGEE
                     ERIVSGEFPIMASTGGPLEAMWKWQTKNAPLVGLPGSSPATSSYYQLAVPRNSVHPNM
                     AKLFIAFMTTREAQSVLEKQDHRSSHLVEGTILANYVKANKIKLQDAKQLSEVFLKED
                     AGLEEELNKILLK"
     gene            complement(1396..>2256)
                     /locus_tag="VLM90_11605"
     CDS             complement(1396..>2256)
                     /locus_tag="VLM90_11605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13663.1"
                     /translation="YHGWLWDARGNCLDQPAEPADSTFKERVKHPAYHAQDAGGLIFA
                     YVGPEPAPLLPPYDLLVRDDGCRVVGGGEEFCNWLQRAENSADGAHSIALHAAGYPNM
                     AMKRPTIKWEPTPFGIKETTLVDGVAKPRISHFIFPSHIRHSAARVDELPRQVIRFRV
                     PKDDYTTNTFYIDFYPHKDGQPTRPESLRVKGFRKSEPGVYTRVQDGWWNLPNREQDR
                     VAQETQGVIADRTKEHLASSDQGILMLRKMIRESIDAVAQGKDPFGVMRSADGQITFD
                     ASRDAVEALS"
BASE COUNT          459 a          684 c          610 g          503 t
ORIGIN      
        1 tgacttgagt ggacatggag actcgattca ttcgctggtt cggcggctaa agaaattatt
       61 ccgtcgttcc gacgcagacc ggcatctaga tttcgacacc ggatggatac cggtttttac
      121 cggtatgacg gaataacgac ctcggcgaca agccaaggga atttggattt gtcgaccgga
      181 agtcggcttt ctgtttatca ttcccgcgag agcgggaaac caggttaatt tcgcatcact
      241 tcaacagaat cttattcagc tcttcctcga gcccggcatc ttccttgaga aacacttcgc
      301 tcaattgctt ggcgtcctgc agcttgatct tgttcgcttt gacgtaattc gccaatatcg
      361 taccctcgac caaatgggag ctgcgatgat cctgcttctc cagcacgctc tgcgcctcgc
      421 gagtggtcat gaaggcgata aacaacttgg ccatgttcgg atgcaccgaa tttctcggca
      481 ctgcgagttg atagtacgac gaagtcgccg gcgaagagcc cggcaagccg accagcggtg
      541 cgttcttggt ttgccacttc cacatcgcct ccagcggccc gccggtgctc gccatgatcg
      601 gaaactcgcc gctgacgatg cgctcttctt caccctgacg cagtcggccg ccggtgagcg
      661 gcgccagctt gcgcgcaaaa ttgagaactt tctctttgcc ccagatcggc gtcaagcgga
      721 ccagccaatg aatgtacgcc gggatcgcca tcttaccggc ccacatccgc gacagcaccg
      781 gatcgatcag atcttcataa ctcttcggcg ccttgtcttt ggggatcgca ttggagttat
      841 aaataatgcc atgaaacgac gcgtagacca gcaacgactc ctgcggggta atttccattt
      901 ccttggtcac ccagggaaag atccccgccc aattcacttt ttccagcgct ttctcctcct
      961 gcatggtcgc gaaggtgccg tcggagccaa gatacatatc cgtcgacgac ttcgagccgg
     1021 ccttctgctc ggtaataatc cgcgccgcca tctgcggaaa gctcggcccg ccgctcaagt
     1081 tcaatttagc cttgaagcca tagcgcttgg cgaacaagtt ttcgagctcg gtaaagccct
     1141 tcttaccgcc aaatgtcgac gtgctcgcga ctaacgtcac ttcgccttct ttttttgcct
     1201 cggcgacgat ctgttcgagt ttctgcgcct gcgccaattg aggcaataat aacaggatgg
     1261 cagctataag tttcaacaca gcattactcc tttcaagcta gtgagagtca acgtcgatga
     1321 tagaggatag aaaatggcgg atggcaagat cgcgccgcca tcgtcgatcc tccatcaacg
     1381 atcctcgacc tgatttcacg aaagcgcttc caccgcgtcg cgactggcgt cgaaggtaat
     1441 ctgaccgtcg gcactgcgca tcacaccaaa gggatctttg ccctgggcta ccgcgtcaat
     1501 cgactcacgg atcatcttgc gcagcatgag aatcccctga tcggagctcg ccagatgctc
     1561 cttggtgcgg tcggcgatca cgccttgagt ttcctgcgct acccgatcct gctcgcgatt
     1621 gggcagattc caccaaccgt cttgcactcg cgtgtacaca cccggctcgc ttttgcgaaa
     1681 acctttgacg cgcagcgatt caggccgtgt cggctggccg tccttgtgcg ggtagaagtc
     1741 gatataaaaa gtattggtcg tgtagtcatc cttgggcacg cgaaagcgga tcacctgtcg
     1801 cggcagctcg tcgacgcgcg ccgcggagtg gcggatatgg gacggaaaaa tgaaatgcga
     1861 tatgcgcggc ttcgccacgc cgtcgaccag cgtcgtctct ttgatgccga atggcgtcgg
     1921 ctcccatttg atcgtcggcc gcttcatcgc catgttggga taaccggcgg catggagcgc
     1981 gatcgagtgc gcgccgtcgg cggagttctc ggcccgctgc agccaattgc agaactcctc
     2041 gccgccgccg accacccggc agccgtcgtc gcgcaccagc aaatcgtagg gcggcaacag
     2101 cggcgcgggc tcggggccga cgtacgcgaa aatcagaccg ccggcgtcct gggcatgata
     2161 ggcgggatgc ttcacccgct ctttgaacgt gctatcggcc ggctcggccg gctgatccag
     2221 acaattgccg cgcgcgtccc aaagccagcc gtgata
//
LOCUS       DATIRS010000919         2740 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_952902, whole genome shotgun sequence.
ACCESSION   DATIRS010000919 DATIRS010000000
VERSION     DATIRS010000919.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2740
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_952902"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(23..1705)
                     /locus_tag="VLM90_11610"
     CDS             complement(23..1705)
                     /locus_tag="VLM90_11610"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HSQ13664.1"
                     /translation="MSVDPITVEIIRCALRAAANEMSAVLKKTAYNMMIYEVQDYCVA
                     ILDSEGCTMSQNEGALPIFLADLGVAVQDGIEVYGKDNIHPGDVFLVNHPEICGQHLN
                     NMAVYTPFFWDGKLLGFLAVRAHWIDVGGGSTGFGSSNTRDVYEEGLQVRSVKIYNRG
                     QPNTEVLRLIEDNIRFPESSLGDLRAQIACCRTGEERLQQICRKYGGAGFQEAVQVIW
                     DQTDKLVRQAVRAIPDGVYEAASFLDDDGRVMNKTIPIKIKVEVRGDELTIDYSEVSD
                     QVPGFINCGASGGMAAARVAFKALTSPQREVNEGSFRALKVILPPGKLLSARRPAPIG
                     GWSLSLPTVLDTILCALAPALPQRIPAAHKGDMGGYAIFGMNPKTGRRYVCQNIIGGG
                     WGGRPFEDGASSSVSMCQGDVKNTPIELQELYYPLLYDCHAFRADSGGAGKFRGGIGV
                     EVRVRPLHDFYLSRNTDRVKCPPWGLLGGEQGAVNETKIQRNGKEEILPGKFSHLLVH
                     PGETVTFLTAGGGGYGKAADRESAAIKRDVKLGYVSTEQAEKNHPAVLGHGD"
     gene            complement(1766..2548)
                     /locus_tag="VLM90_11615"
     CDS             complement(1766..2548)
                     /locus_tag="VLM90_11615"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HSQ13665.1"
                     /translation="MSTDSTPGYELLYDIIRRRSSIRKLKPDPIPDEAINKILEAGRW
                     AMSGANSQPWEYIVVKDPKVKKDLFRCYSEDNTDFIYWMEQQRVFELRHPAYQMTADK
                     AVEQQRRGAGWSEAPALIVVVGDGRRQWGTVQGAHTFGRDQSHLTDGLANTCTLMHLS
                     AASLGLATQWVSIHVQEPFKKVLGVPDLMMLYLIIPVGYPAVEPSEGVRRPLEEIVHH
                     DHYEQEKFMSNERVIQFLYELRGKTLQTYRQSYVGKEEPEKP"
BASE COUNT          561 a          842 c          745 g          592 t
ORIGIN      
        1 taaactggaa ttgagcgagg actcaatcac catgaccgag cacggccggg tgattttttt
       61 ccgcctgttc cgtcgaaacg tagcccaact tcacgtctcg ctttatcgcc gccgactccc
      121 gatcggcggc cttgccgtat ccgccgccgc cggcggttaa aaacgtcacg gtctcgccgg
      181 gatgaaccag cagatggctg aatttgcccg gtagaatttc ttccttgccg ttgcgctgga
      241 tcttagtctc attgaccgcg ccctgctcgc cgccgagcag accccacggc gggcacttga
      301 ccctgtccgt gttgcgactg aggtagaagt cgtgcagcgg tcgtactcgc acttcgacgc
      361 cgatgccgcc gcgaaattta ccggcgccgc cgctgtcggc cctaaaagcg tgacagtcgt
      421 aaagcagcgg ataataaagt tcctgtagtt cgatgggcgt gttcttcaca tcgccttgac
      481 acatcgacac cgacgacgac gcgccgtcct cgaagggacg gccaccccag ccgccgccga
      541 tgatattctg acagacatag cgcctgccgg ttttcggatt cataccgaag atcgcgtagc
      601 cgcccatgtc gcccttgtgc gctgcgggaa tgcgctgcgg caaagccggc gccagcgcgc
      661 agagaatcgt gtcgagcacc gtcggcaggg acaagctcca gccgccgatc ggcgccggcc
      721 ggcgcgcgct caggagtttg cccggaggga gtataacctt gagcgcgcgg aaagagcctt
      781 cgttgacttc gcgctgcggc gacgtcaacg ctttgaatgc aacgcgcgcc gccgccatgc
      841 cgccggacgc gccgcaattg ataaatcccg gcacctgatc gctgacttcg gagtagtcga
      901 tggtgagctc atcgccgcgc acttccacct tgatcttgat cggaatcgtt ttgttcatga
      961 ctctgccgtc gtcgtcgaga aaagacgcgg cctcgtacac gccgtccggt atggcgcgca
     1021 ccgcctggcg cacgagtttg tccgtctggt cccaaatcac ctgcaccgct tcttgaaaac
     1081 ccgcgccgcc atacttgcgg caaatctgct gcaagcgttc ttcaccggta cggcagcagg
     1141 caatttgcgc gcgcagatcg ccgagcgagg attcgggaaa acgaatattg tcttcgatca
     1201 agcgcagcac ttcagtgttc ggctggccac gattgtaaat cttgacggag cgcacttgca
     1261 gtccttcttc gtaaacatcg cgggtattgg acgatccgaa tcccgtgctc cccccgccga
     1321 cgtcgatcca gtgggcgcgc accgccaaaa agcccaacag tttgccgtcc caaaagaatg
     1381 gcgtgtagac ggccatatta tttaagtgct ggccgcagat ctcgggatgg ttgaccagaa
     1441 atacgtcgcc gggatgaatg ttgtccttgc cgtaaacttc gatgccgtcc tgcacggcga
     1501 cgccgaggtc ggcaagaaag atcggcaggg cgccctcgtt ctgcgacatg gtgcaacctt
     1561 cgctgtccaa tatcgccacg cagtaatcct gcacttcata gatcatcatg ttgtaggcgg
     1621 tcttcttcag caccgccgac atctcgttgg cagccgccct caaggcgcag cggatgattt
     1681 caacggtaat gggatcgaca gacacagcaa actctccctc gaattctctc gttcggagcc
     1741 cctaacccct tactcttcac ccccctcacg gtttctccgg ttcttccttc cccacatacg
     1801 actgccggta agtttgcagc gtcttgccgc gcagctcgta gaggaattga atcacgcgtt
     1861 cgttgctcat gaacttctct tgctcgtagt gatcgtggtg gacgatctct tccagggggc
     1921 ggcgcacgcc ctccgaaggc tccaccgcgg gatagccaac cggaataatc aggtataaca
     1981 tcatcaagtc cggcacgcct aaaactttct tgaacggttc ttgcacgtga atactgaccc
     2041 actgggtcgc gagtccgagt gacgccgcgg ataagtgcat cagcgtacag gtattcgcca
     2101 agccgtcggt aagatgagat tgatcgcggc cgaaggtgtg cgcgccttga acagttcccc
     2161 actggcgccg cccgtcgccc acgacgacga tcaaagccgg ggcttcagac cagccggcgc
     2221 cgcgccgttg ctgctccacc gctttgtccg cggtcatttg ataggccggg tggcgcaatt
     2281 cgaacacgcg ctgctgttcc atccaataga taaaatccgt gttgtcctcg gagtaacagc
     2341 ggaaaagatc ttttttgacc ttgggatctt tgacgacgat gtattcccaa ggctgcgagt
     2401 tggcgccgga catcgcccat cgccccgctt cgagaatttt gttaatggct tcatcaggaa
     2461 tcggatcggg ttttaactta cgaatactcg agcggcgccg aatgatgtcg tagagaagct
     2521 cataaccggg agtgctgtct gtgctcatga aggacctcca aatgatagaa acaatccgct
     2581 cgaatctcag ttcttatagc tgacaacgcc gcgcagcttc aatcactctc tgcgccgtat
     2641 cgtacaagcc ggccttcgtt cggacctgtg ctcgacaatt aatacaatgc atggcacctt
     2701 atcctaacct taccacgtcg aggggaggaa ggaatcagat
//
LOCUS       DATIRS010000920         1507 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1346489, whole genome shotgun sequence.
ACCESSION   DATIRS010000920 DATIRS010000000
VERSION     DATIRS010000920.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1346489"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..208
                     /locus_tag="VLM90_11620"
     CDS             <1..208
                     /locus_tag="VLM90_11620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13666.1"
                     /translation="PNAGLLWARWLISEEGQKVYAQAGETPAHPKVEPVDKSRPTKVY
                     FLAVEDGKDYPKYQKLWREIFQIR"
     gene            complement(212..1207)
                     /locus_tag="VLM90_11625"
     CDS             complement(212..1207)
                     /locus_tag="VLM90_11625"
                     /inference="COORDINATES: protein motif:HMM:NF014476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine cyclodeaminase family protein"
                     /protein_id="HSQ13667.1"
                     /translation="METKGILYLSNNDVKKVLDLGRAIEITEQALRDHSEGRVIWSTP
                     EDFAIKPEQGWQSWVTGCALQTTPVAGFRIRSIKAAGGSRDVSRPPRGPRRVLILSDL
                     EGGEILAFMDEDWCHAVRTAAAATVAMRVLARKGSTVMAMLGAGDTARAAVPVMARAF
                     NLKEVRVTSRTPESRQNYAKEVGAEYSLNIIPMESTEAALKGADVVISATTTSTPFVK
                     ESWLGEGITVYSIGKHQEVESLVYKNADKFVVDSWLHCKNKSDMQRMLKEDYLSEKDL
                     YAELPELLAGKKPGRQSDQERIFIRAIGLVNQDIAMADHIYRSALEKGIGTRLPY"
BASE COUNT          293 a          430 c          442 g          342 t
ORIGIN      
        1 tcccaacgcg gggttgcttt gggcgcgctg gctgatcagc gaggaagggc agaaggtcta
       61 cgcgcaggcc ggtgagacac cggcccatcc gaaagtcgaa ccggtggata agagccggcc
      121 gacgaaagtt tattttctgg cggtcgaaga cggcaaagac tatccgaagt atcagaaact
      181 gtggcgcgag atatttcaga ttcgctaaac gctaataggg cagccgagtg ccgattccct
      241 tctctagcgc gctgcggtaa atgtgatcgg ccatggcgat gtcttgattg actaggccga
      301 tggcgcggat gaaaatccgt tcctgatccg actgacggcc gggtttcttg ccggcgagca
      361 actcgggcag ctcggcgtag agatcctttt cgcttaaata atcttctttc aacatgcgct
      421 gcatgtcgga tttgtttttg cagtggagcc agctgtcgac gacgaatttg tcggcattct
      481 tataaaccaa gctttcgact tcctggtgct tgccgatgga gtaaacggtg atgccttcac
      541 cgagccagga ctctttgacg aacggcgtcg aagtcgttgt cgccgagatc accacatctg
      601 cgcctttaag cgctgcttcg gtggactcca tcggtataat gttcaaactg tattccgcgc
      661 ccacttcctt ggcgtagttc tgacgcgact ccggcgtgcg tgaagtgacg cggacttcct
      721 ttaaattaaa tgcccgggcc atcaccggca cggcggcgcg ggcggtgtcg ccggcgccga
      781 gcatcgccat gacggtcgat cctttgcgcg caagcacacg catggcgaca gtagcagcgg
      841 cggcggtgcg cacggcgtgg caccagtctt cgtccatgaa tgcgaggatc tcgccgcctt
      901 cgagatcgct gagtatgagc actcgccgcg gtccgcgcgg cgggcgcgag acatcccggc
      961 taccgccggc ggctttgatc gaacggatcc gaaagccggc gactggcgtt gtctgcaacg
     1021 cgcagccggt aacccaggac tgccagcctt gttcgggctt gatggcgaaa tcttccggcg
     1081 tcgaccagat gacgcgtcct tcgctgtgat cgcgcagcgc ctgctcggtg atctcgatgg
     1141 cccggccgag gtcgaggact tttttgacgt cgttattgga gaggtagagg atgcctttgg
     1201 tttccataaa tgttttccgg agtgtctccc gcaaaggcgc aaagacgcta agttcggaat
     1261 tcttgtcatt tcgaccgtag ggagaaatct tcttagatcc atcgcattcg ctcgggatga
     1321 cgggcctcgc ccgtcacctt tgcgtctttg cgcctttgcg ggaggaaatc cgaatccaaa
     1381 cagctcgctc accgctgtac cgcatacaac cgatcgatga atccactctc gtccagcttt
     1441 cggacgaacc gcgcgtcaac caaatcttcc actttcagcg tcgcgatctt cggattctgc
     1501 tgcgcca
//
LOCUS       DATIRS010000921         2821 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_363350, whole genome shotgun sequence.
ACCESSION   DATIRS010000921 DATIRS010000000
VERSION     DATIRS010000921.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2821
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_363350"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..747)
                     /locus_tag="VLM90_11630"
                     /pseudo
     CDS             complement(1..747)
                     /locus_tag="VLM90_11630"
                     /inference="COORDINATES: protein motif:HMM:NF018349.4"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1152 domain-containing protein"
     gene            complement(672..1226)
                     /locus_tag="VLM90_11635"
     CDS             complement(672..1226)
                     /locus_tag="VLM90_11635"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSQ13668.1"
                     /translation="MTIDIAKLKSMAPPRGMEFHIAKVGHVVLQVADLERATQFYTHV
                     LGFKVSDVYPEEMMAGGMVFLRCNSDHHCLALVGQGDGKNSHRELHHLAFEVPTLGEV
                     LRARDRLQQYGAQIDFEGRRRAGCQIAVEFRDPDNNSLEIYWGVDQVGSDGHVRPSNE
                     WHGVKSLDEAIANPVPGQDTHIPK"
     gene            1476..>2821
                     /locus_tag="VLM90_11640"
     CDS             1476..>2821
                     /locus_tag="VLM90_11640"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HSQ13669.1"
                     /translation="MDAFTAEVIRSSVVAITDEMKTNLMRTAYNMIIYEAEDFTVGLF
                     DADGNTISIGLGLPMFIRGLSDAIKAKLAHWGKENIHPGDILLTNDPQVMGSHLNHMI
                     FSLPIFHDGALIAFSSSMGHWQDVGGVLGAVTRDIFSEGLQMPFVKIFKAGKQDMELT
                     EIIRSNCRLPHFAMGDFRAQIAAIRTGERRLTRLIERYGAATFKQSIELIFDQSEKLA
                     RAAVEKIPDGVYVAESFMDDDGVNIGKHIPIKIRVEVKADEMTVDLSGVSPQVAGPYN
                     SGATAGRSASEVAFKFLTTPLLLPINEGSFRPLKINLPPGRVVSATKPAPVRTWMTVP
                     MTVSDTIFKALAQACPDNVLAGHHADLAAPRTFGLDPKSGRSFHFPPMLSGGGWGALS
                     NADGQNATFCINDGDTHNTPVEAGEGRAPIFVSDRKLRQDSGGPGRFRGGLGVSQEV"
BASE COUNT          552 a          809 c          877 g          583 t
ORIGIN      
        1 gactgcttcg agctcggcgg cgatcttcgg tgtcagcgac caggcgccga gcagagcgcc
       61 ggcagcgccg agcttgctca aagccagctc gatttcgtca accgtcagtt cgccgtcgct
      121 gccgtagccg aagacgcccc agatggtttg atgaccgcgt ttttccaact cagccaaggc
      181 ggcgagcatg atcgaatcag cgagcggact gcgcagtccc ggttcctcgc cttgggcgag
      241 agaatcgccg ccgacgtcga ggccgacgag cagatcggcg tcgagggcgt tcatggcgac
      301 ttacaatccg tcgactactc cattgacgcc gccgttgata tcgacgagca agacttcgcg
      361 gttgatgaat tgagccatcc tggcttcggc gaagggcacg ccggtgctgg tttggctatt
      421 ctcattcgcc atccaactaa actcgtgcag cgcgcggaca tttttcgttt cgcttagttt
      481 gcgcgggccg gggacgggat cgtaaacgtt tcgttcccag gacaagccgc cgagggtgaa
      541 gcgcagaccg caaaattcaa gaaagcgcgc ggtggccagg gcgccggcga catcaccgcc
      601 gccgccgacg ccgatgacca gagcatgttt cgaatcgcga atcagatctt cgagcgaagc
      661 agcggaggaa ttcatttggg gatatgagta tcttggcccg gcaccggatt ggcgatggct
      721 tcgtccaacg actttacgcc gtgccattcg ttcgacggcc tgacatggcc gtcgctgccg
      781 acttgatcga cgccccagta gatttccaag gagttgttgt ccgggtcgcg gaactcgacg
      841 gcgatctgac agccggcgcg gcgccgtcct tcaaagtcga tctgggcgcc gtattgctgc
      901 agccggtcgc gggcgcgcag cacttcgccg agggtcggga cttcgaaggc gaggtgatgc
      961 agttcgcgat ggctgttctt gccgtcgccc tggccgacca gggcgaggca gtgatgatcg
     1021 ctgttgcagc gcagaaacac catgcctccc gccatcatct cttcgggata aacgtccgag
     1081 accttgaagc cgagaacgtg agtgtaaaat tgggtggcgc gctcgagatc ggcgacttgc
     1141 agcaccacat ggccgacctt ggcgatgtgg aactccatac ctctgggagg cgccatgctt
     1201 ttgagtttcg cgatatcgat ggtcatggat ttttacttcc tcaatccgaa tgaaaattgc
     1261 tataacattt ccctatcgtt tctgcacctt cgggtgaaga accggcccgg gcagggattg
     1321 gccggcggta ggcgcgtggc cgccaagcgg atcaatgctt ctggtgttga agacatttct
     1381 ggactaggac actaggtgcg atggagaata gactatcgga atagtgagag cgttggttta
     1441 tgcggcgtga aactgacaag cgaacatcag tcgatgtgga cgccttcact gcggaggtga
     1501 tccgcagttc agtggtggcg atcaccgatg agatgaagac caatctcatg cgcaccgcct
     1561 acaatatgat catctacgag gcggaggatt ttaccgtcgg tctgttcgac gccgacggca
     1621 acacgatttc catcggactc gggctgccga tgttcattcg cggcttgtcg gatgcgatca
     1681 aggccaagct cgcgcattgg ggcaaggaga atattcatcc aggcgatatt ttgctgacca
     1741 acgatcccca ggtgatgggc agccatttga accacatgat cttttcgctg ccgatctttc
     1801 acgacggcgc gctgatcgct ttctcttcgt ccatgggcca ttggcaggat gtcggcggcg
     1861 tgctcggcgc ggtgacccgg gatatttttt ccgaggggtt gcagatgccc ttcgtgaaaa
     1921 tcttcaaagc cggcaagcaa gatatggagc tgacggagat cattcgcagc aattgccgcc
     1981 tgccgcactt cgccatgggt gactttcgcg cccagatcgc ggcgatccgc accggcgagc
     2041 ggcggttgac ccggctgatc gagcgctacg gcgccgcgac gtttaagcag agcatcgaac
     2101 tgatcttcga tcaaagcgaa aaactcgcgc gcgccgcggt ggagaaaatt cccgacggcg
     2161 tctatgtcgc tgagtcgttc atggacgacg acggcgtcaa catcggcaag catatcccga
     2221 ttaaaattcg cgtcgaagta aaagccgacg agatgaccgt cgacctgagc ggtgtcagcc
     2281 cgcaggtggc tgggccgtac aattctggcg cgacggcggg gcggtcggca tcggaagtgg
     2341 cgttcaagtt tctcaccacg ccattgctgc tgccgatcaa tgaaggttcg tttcggccgt
     2401 tgaaaatcaa tttaccgccg ggccgggtgg tcagcgcgac caagccggcg ccggtgcgca
     2461 cctggatgac cgtgccgatg acggtttccg acacgatctt taaagcgttg gcgcaagcct
     2521 gtcccgataa cgtcctcgcc ggccatcatg ccgacttggc cgcgccgcga acttttggtc
     2581 tcgatcccaa gagcggccgc tcgtttcact ttccgcccat gctgtccggc ggcggctggg
     2641 gcgcgctgtc caatgccgac ggtcagaacg cgacgttttg catcaacgac ggcgacaccc
     2701 ataacacgcc ggtggaagcg ggcgaggggc gcgcgccgat ctttgtctcc gatcgcaagt
     2761 tgcgccagga ctccggcggg ccgggaagat ttcgcggcgg tctcggtgtc tcgcaagagg
     2821 t
//
LOCUS       DATIRS010000922         2365 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1740829, whole genome shotgun sequence.
ACCESSION   DATIRS010000922 DATIRS010000000
VERSION     DATIRS010000922.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2365)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2365)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2365
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1740829"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2327
                     /gene="clpB"
                     /locus_tag="VLM90_11645"
     CDS             <1..2327
                     /gene="clpB"
                     /locus_tag="VLM90_11645"
                     /inference="COORDINATES: protein motif:HMM:TIGR03346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HSQ13670.1"
                     /translation="KDEYVSTEHLLLAMVQDSGETGKALKELGATRYKILNALVSIRG
                     SQRITDPNPEGKYQSLEKYGRDLTDLARKGKLDPVIGRDDEIRRVIQVLSRRTKNNPV
                     LIGEPGVGKTAIVEGLALRIINGDVPEGLKDKKLISLDLSALVAGAKFRGEFEDRLKA
                     VLKEVTEADGQIVLFIDELHTLVGAGAAEGAMDASNMLKPALARGELRCVGATTLDEY
                     RKRVEKDPALERRFQQVYVGEPSVQDTIAILRGLKERYEVHHGVRITDPAIIAAATLS
                     HRYISDRFLPDKAIDLIDEAASRLRIEIDSMPIEIDEVERKIMQLEIERQALKREQDK
                     ASMDRLAQLERDIHNLKETSSALKTHWQNEKAAIQQLRGIKEKIEATKVEEQKAQREG
                     NLNKAAELRYGTLTQLQKDSDAANQKLAELQTHQKMLKEEVDAEDIAEVVAKWTGVPV
                     SKMLEGEVQKLLKMEERLKLRVVGQENAIIAVSNAVRRARAGLQDSNRPIGSFIFLGP
                     TGVGKTELCRALAEFLFDDEQAIVRLDMSEYMEKHSVSRLIGAPPGYVGYDEGGQLTE
                     AVRRRPYSVVLFDEIEKAHPDVFNALLQLLEDGRMTDGQGRTVDFKNTVIIMTSNLGS
                     QYIQELAGNDRKQMEDYVGNALREAFKPEFLNRVDETIIFSSLGREEIKSIVDIQLKR
                     LHQNLANRKMALEITAPAKALLADKGYDPVYGARPLKRTIQRLIQDPLAVKILAGEFK
                     EGDTVKVEVDEDELSFTHGPPLASDATFEERTLH"
BASE COUNT          582 a          684 c          693 g          406 t
ORIGIN      
        1 tgaaagacga gtatgtctcc accgaacact tgctgctcgc catggtgcag gatagcggcg
       61 aaaccggaaa agccctcaaa gagttgggcg caacccgcta caaaattctc aacgccctgg
      121 tcagcatccg cggctctcaa cggatcaccg acccgaatcc agaaggaaaa tatcaatcct
      181 tggaaaagta cggccgcgat ctaaccgacc tggctcgcaa gggcaagctc gatccggtga
      241 ttggccgcga cgacgagatt cgccgggtga ttcaagtgct atcgcgccgg actaagaata
      301 atccggtgct gatcggcgag ccgggcgtcg gtaagaccgc tatcgtggaa ggcctcgcct
      361 tgcgcatcat caacggcgat gtcccggaag gattgaagga caaaaaactt atctcgctcg
      421 atctcagcgc cttggtcgcc ggggcgaagt tccgcggtga gtttgaagac cgtctcaaag
      481 cggttttgaa ggaagtcacc gaggccgacg gccagatcgt gctgttcatc gatgagctgc
      541 atacattagt cggcgccggc gccgccgaag gcgccatgga tgcatcgaat atgctcaagc
      601 ccgcgctggc gcgcggtgag ctgcgctgcg tcggcgcgac gacgttggac gagtaccgca
      661 aacgagtgga aaaggatccg gcgctggaac ggcgctttca acaagtttac gtcggcgagc
      721 cttcggtgca agataccatc gccatcctgc gcggcttgaa ggaacgctac gaagtccatc
      781 acggcgtgcg tatcaccgac ccggcaatta tcgccgcggc gacgctgtcg caccgctata
      841 tcagcgaccg cttcctgccg gacaaggcca tcgacttgat cgacgaagcc gcgtcgcggc
      901 tgcgcattga aatcgacagc atgcccatcg aaatcgacga ggtcgagcgc aagatcatgc
      961 aattggagat cgagcgccag gcactcaagc gcgaacagga caaagcgtca atggatcgtt
     1021 tggcgcagct cgaacgggat attcacaatt tgaaggagac ctcgagcgct ctcaaaaccc
     1081 attggcagaa tgaaaaagcc gccatccaac agctgcgtgg aatcaaggaa aagatcgaag
     1141 cgaccaaggt cgaagaacaa aaagcccaac gggagggcaa tctcaacaag gcggctgagc
     1201 tgcgctacgg caccttgacg cagttgcaga aagacagcga cgcggccaat cagaaactcg
     1261 ctgaactgca aacccatcaa aagatgctca aggaagaggt cgacgccgaa gatatcgccg
     1321 aagtggtcgc caaatggacc ggcgttccgg tgtcgaagat gctcgaaggc gaagtccaga
     1381 agctacttaa aatggaagaa cggctaaagc tccgcgtggt cggccaagaa aacgcgatta
     1441 tcgcggtgtc caacgccgtg cgccgcgccc gcgccggctt gcaagatagc aaccggccga
     1501 tcggctcgtt tatctttctc ggccccaccg gcgtcggtaa gaccgaactg tgccgggcgt
     1561 tggccgagtt tctctttgac gacgagcaag ccatagtgcg cctcgacatg tcggagtaca
     1621 tggaaaaaca ttccgtctcg cgcttgattg gcgccccgcc gggctatgtc ggctacgatg
     1681 aaggcgggca actgaccgaa gccgtacgcc gccggcccta ctccgtggtg ttgttcgacg
     1741 aaatcgagaa ggcccacccc gacgtgttca acgcgctctt acagctgctt gaagatggcc
     1801 gcatgaccga tggccaaggg cgcaccgtcg atttcaaaaa caccgtcata atcatgacct
     1861 cgaacctcgg cagccagtat atccaggagc tcgccggcaa tgaccgtaag cagatggaag
     1921 actatgtcgg caacgctttg cgcgaggcct ttaaaccgga gtttttgaat cgggtcgacg
     1981 agacgatcat ttttagcagc ctcggccgcg aggagatcaa gtcgatcgtc gatattcagc
     2041 tcaaacggct gcaccagaat ttggccaacc gcaagatggc gctggagatc accgcgccgg
     2101 ccaaagcctt gctagccgac aagggctacg atccggtcta cggcgcgcgc ccgctcaagc
     2161 gcaccatcca gcgattgatt caggacccgc tggcggttaa gattctcgct ggcgagttca
     2221 aagagggcga caccgtgaag gtcgaagtgg acgaagacga gctcagcttc acccatggtc
     2281 cgccgctggc gagcgacgcg accttcgagg aaaggaccct gcattgagtc cagaggcaac
     2341 aaagcttccc atcggcctgg cgaaa
//
LOCUS       DATIRS010000923         2903 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1249325, whole genome shotgun sequence.
ACCESSION   DATIRS010000923 DATIRS010000000
VERSION     DATIRS010000923.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2903
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1249325"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..437
                     /locus_tag="VLM90_11650"
     CDS             <1..437
                     /locus_tag="VLM90_11650"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HSQ13671.1"
                     /translation="WRNPFTRATVRAAGYIANDDDSVRLIENCVAAVRRGGNLIIFPE
                     GTRTPADGSIRLKRGAANVAVRVPCTVTPVRIRSVPPMLVRGQKWWRLPDRSSHFSFD
                     VLDDIDVLPFLVGAGSEVLAARQLTGCLQKCLVDESPCRANH"
     gene            454..699
                     /locus_tag="VLM90_11655"
     CDS             454..699
                     /locus_tag="VLM90_11655"
                     /inference="COORDINATES: protein motif:HMM:NF012759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopantetheine-binding protein"
                     /protein_id="HSQ13672.1"
                     /translation="MIIEVLQLEDITPADIDADAPLFVEGLGLDSIDALELGVAIYKR
                     YGITLSANAEENRRHFASVRALTLMVENQRNIEGESR"
     gene            696..959
                     /locus_tag="VLM90_11660"
     CDS             696..959
                     /locus_tag="VLM90_11660"
                     /inference="COORDINATES: protein motif:HMM:NF003757.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HSQ13673.1"
                     /translation="MTLAVPTQKEDIYPWLVDMLHEMFELDKGKITLGANLYTDLDID
                     SIDAVDLAVKLKELTGKRLQPEVFKRVRTVQDVVDALADLLER"
     gene            977..1516
                     /locus_tag="VLM90_11665"
     CDS             977..1516
                     /locus_tag="VLM90_11665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13674.1"
                     /translation="MSLLTIAITLVYPLALWFGQNRVEPRILALLLLLVALTRLPMLR
                     VNSAWRWWAGGTCLLLTLAVWANAVLPLKLYPVMVNATLLGAFAYTLMVPPSMVERLA
                     RMREPELPAPAICYTRRVTQVWCLFFAFNGAIALFTTLWASAAVWTIYNGFIAYLLMG
                     LLFAAEYCFRWRFKRRYHG"
     gene            1509..>2903
                     /locus_tag="VLM90_11670"
     CDS             1509..>2903
                     /locus_tag="VLM90_11670"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HSQ13675.1"
                     /translation="MAETVDLYGLLNAAWPPERTVAWRGEMAVSYAGFLARVRAWRAL
                     LARSSGRTFALYLEDSVEFASALFGSWQAGKIVYLPGDNLPGTCASLRQTVDGFLGEF
                     ASEWAPMAPVFEEIPLDVGDFQRLDPDFAGLVLYTSGSTGPPQAIPKKLAQMAREVAT
                     LERQFGERLGTAEIVATVSHQHIYGLLFRLLWPLVGGRALHARGFPYFEELMPVLSTR
                     ECVLVSSPAHLQRLPEHSSWAQARRRLRAIFSSGGPLTIKVAEETQRLLGSVPTEVYG
                     SSETGGIAWRQQRAKTDAAWSPFPGVAWRIDSQDGVLEVRSPNLPNDDWFQMADRAEP
                     SERDQFLLKGRIDRIAKIEGKRISLTAIETELKKSPLVADARAVMAEGTRQRIAAFVV
                     PSALGWREFTGRGKLTLNRLLRDLLRQFIEPVGLPRIWYYLDALPVNSQSKSTFAELI
                     AAHEGKATRPTAPHE"
BASE COUNT          550 a          822 c          879 g          652 t
ORIGIN      
        1 tgtggcgcaa tcctttcacg cgagcgaccg ttcgtgctgc gggttatatc gccaatgatg
       61 atgacagtgt gcggcttatc gaaaactgcg tggccgcagt tcgccgcggt ggcaacctca
      121 ttatcttccc ggaaggtacg cgcacgccgg cggacggctc gatccgtcta aaacggggcg
      181 cggcgaacgt cgccgtgcgc gttccgtgca ctgtcacccc ggtgcgcatt cgcagcgtgc
      241 cgccgatgct agtcagaggg caaaaatggt ggcgcctgcc ggatcgatcg tcgcacttca
      301 gtttcgacgt gttggatgac atcgatgtcc tgccttttct cgttggggcg ggcagcgagg
      361 tcctagccgc gcgccagttg acgggctgct tgcagaaatg tttagtggat gagagtcctt
      421 gccgtgcaaa ccactgaaga tgaaataaag cggttgatca tcgaggttct tcaactggag
      481 gatattaccc cggcagacat cgatgccgat gcgccgctat ttgtcgaagg gctaggattg
      541 gactccatag acgctcttga gctcggcgtc gctatctaca agcgctacgg tatcacgtta
      601 tcggcaaacg cagaggagaa tcgccggcat tttgcgtcgg ttcgcgcgct cacgctcatg
      661 gtcgagaacc agcggaacat cgagggagaa tcgagatgac tctggcagtt ccaacacaga
      721 aagaagatat ttatccgtgg ctcgtcgaca tgctgcacga aatgttcgaa ctcgataaag
      781 ggaaaatcac tctgggcgcg aacctgtaca ccgatctgga catcgacagt attgacgcgg
      841 tcgatctcgc cgtgaaactc aaggaactta ccggcaagcg gttgcagccg gaagttttca
      901 agcgcgtgcg cacggttcaa gacgtcgtcg acgcgctggc agatttgctt gagcggtgac
      961 cgaggtgcgc cgcgccttga gcttattgac gatcgccatc acgctggttt acccgctagc
     1021 tctgtggttt ggccaaaata gagtcgagcc gcgcatcctg gctctcctgc tcctgctggt
     1081 cgcactgacg cgactcccaa tgttgagagt caactcggcc tggcgctggt gggcgggggg
     1141 cacctgtttg ctcctgacat tggctgtctg ggccaacgct gtcctgccat tgaaactcta
     1201 tcccgtgatg gtgaacgcca ctctactggg agcttttgcc tataccctga tggtcccgcc
     1261 ttcaatggtc gagcgcttgg cgcgcatgcg ggagccggaa ctaccggcac cggcgatctg
     1321 ttatacgcgc cgagtgaccc aagtctggtg tctatttttc gcgtttaacg gcgctatcgc
     1381 gttgttcacc acgctctggg cctcggcggc tgtctggacg atttacaacg ggtttatcgc
     1441 ctaccttctc atggggcttc tcttcgccgc cgaatactgc tttcgctggc gttttaagcg
     1501 acgttatcat ggctgaaact gtcgatttgt acggtctctt gaacgcggcg tggccgcctg
     1561 agcggacggt cgcctggcgc ggcgaaatgg cggtgagtta cgcggggttt cttgcccgtg
     1621 tgcgcgcctg gcgcgcttta ttggcgcgca gcagcgggcg caccttcgca ctctatctcg
     1681 aagacagtgt ggagtttgcc agcgcattgt tcggctcttg gcaagccggc aaaatcgtct
     1741 acttgccggg cgataattta cccgggacct gcgcgagcct gcgccaaacc gtggatggat
     1801 ttctcggcga gttcgcgtcc gaatgggcgc cgatggcgcc ggtgtttgaa gaaatcccct
     1861 tggacgtggg tgattttcag cgcctggatc ctgacttcgc cggtttggtg ctttacactt
     1921 ccggcagcac cgggccgccc caggctattc cgaaaaagct ggcgcagatg gcgcgtgagg
     1981 tggcgacctt ggaacggcag ttcggcgaac ggctcggcac cgccgagatt gtcgcaaccg
     2041 tatcgcatca acatatttat ggattgctgt ttcgattgtt gtggccattg gtgggcggtc
     2101 gtgcgctgca tgcgcgcggc ttcccgtact tcgaggaact catgccagtg ttatcgacgc
     2161 gcgagtgtgt cctggtgtcg agcccggcgc acttgcagcg tttgccggaa cattcaagct
     2221 gggcccaggc gcgccgacgg ctgcgcgcga ttttctcgtc cggcggaccg ttgacgataa
     2281 aggttgccga agaaacccaa cgattactcg gttcggtgcc cacggaagtg tatggcagct
     2341 ctgaaaccgg cggcattgcc tggcgccagc agcgcgcgaa aaccgacgcg gcatggtcgc
     2401 catttccagg tgttgcctgg cgcatcgatt ctcaagatgg cgtccttgaa gttcgttcgc
     2461 ccaatttgcc caatgacgat tggtttcaaa tggccgacag agccgagcct tcggaacggg
     2521 atcaatttct actcaaaggg cggatcgacc ggatcgccaa gatcgagggc aaacggattt
     2581 ctctgaccgc tattgagacg gagctgaaaa aatctccatt agtcgccgac gcgcgtgccg
     2641 tcatggcgga aggaacacgc caaagaattg ccgccttcgt cgtgccttcg gcgcttggat
     2701 ggcgtgaatt caccgggcgc ggcaaactaa ctctcaaccg gttactacgg gacctgctgc
     2761 gtcagtttat cgaaccggtc ggcttgccgc gcatttggta ttatcttgac gctctgccag
     2821 taaactctca aagcaaatcc acctttgccg agctcatcgc agcgcacgaa ggcaaggcga
     2881 cacgcccgac agcgccgcac gag
//
LOCUS       DATIRS010000924         2085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1935995, whole genome shotgun sequence.
ACCESSION   DATIRS010000924 DATIRS010000000
VERSION     DATIRS010000924.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2085
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1935995"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..303)
                     /locus_tag="VLM90_11675"
     CDS             complement(<1..303)
                     /locus_tag="VLM90_11675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13676.1"
                     /translation="MNEAITSSSAALKRYGLVALAFMHIAVGRGLHGTFGVFFVAMLD
                     AFGWSRATTAGAISLAIIFEGACLPWAGGLIDRIGGRKTLICGGLIVAIGVSFASTL"
     gene            complement(386..1066)
                     /locus_tag="VLM90_11680"
     CDS             complement(386..1066)
                     /locus_tag="VLM90_11680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13677.1"
                     /translation="MAAAPSTPATPTPNNSTPGQGVGTITGKVVFKGTVASGKVTIGK
                     DKEVCGDSKLDPVLVVGSQGEVKNAVIQIADLKRANSVPKEAVLDQVQCEYVPHVLAI
                     PVGATVKIKNSDGILHNVHTFSEKNTPFNRAQPKYLKEISEKFGKPEVVSVRCDVHAW
                     MSGWIVVTESPYYDVTSADGSFKLESVPVGKYTLEVWHETLGKTTQSVEVKLAEVTNV
                     TFEFQMKK"
     gene            complement(1229..>2085)
                     /locus_tag="VLM90_11685"
     CDS             complement(1229..>2085)
                     /locus_tag="VLM90_11685"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ13678.1"
                     /translation="PPAPVADRSVDYWGALLLIGATIALIAAVDHRIMESLAPGLRVA
                     LVVGFFVVFLGFLYREKTAASPILDLSLFRIRMFTLSGLALLLVGVAQVMIGFVLPFY
                     LQDVLKLKPSFIGLLFVSAPIFTVTLSPLVGWAVDKVGPRLPATAGIAFLACAGFVGS
                     YLRTDSHCLSAVLVLGLWGLATSLFFTSNHTAMITSVPTQHRGVATGAIYVMFGLGTT
                     FGVSLGTMLLTASFRYFTGDPTATATAANPEMFVRSMNFSFMIGGSMALLAMLLSALR
                     GERRVSAH"
BASE COUNT          509 a          641 c          562 g          373 t
ORIGIN      
        1 gagagtcgaa gcgaagctca ctccgatagc gactatcaga ccgccgcaga tcaaagtctt
       61 gcgcccgcct atgcggtcga ttaatccgcc ggcccagggc agacaagcgc cttcgaatat
      121 gatcgccagc gagatcgcgc cggcggtcgt cgcgcgcgac caaccgaagg catccaacat
      181 cgcgacaaag aacactccga acgtcccgtg cagaccccgg cccacagcga tgtgcataaa
      241 cgccagcgcg actaagccat aacgcttaag cgccgcagac gaagaggtaa tggcttcatt
      301 cataacgacg aaacgttagg aatatcccga gcgcgacaga atgtctaatt cacggcaaga
      361 ttatcttggc gagtggtctc gcggattact tcttcatctg gaattcgaaa gtcacgttag
      421 tcacctccgc caacttcact tcgacggact gggtggtctt tcccaaggtc tcgtgccaaa
      481 cctccagcgt gtatttcccc acggggacac tttccagctt gaagctgccg tcggcggagg
      541 tcacgtcata ataaggactc tcggtgacaa caatccaacc gctcatccaa gcgtggacat
      601 cgcagcgcac cgagaccact tccggcttgc caaacttctc gctgatttcc ttcagatact
      661 taggctgcgc ccggttgaac ggagtattct tctcactgaa ggtgtggacg ttatgtaaga
      721 tcccgtcact atttttgatc ttgaccgtag cgccgacagg aatcgctaac acatgcggca
      781 catactcgca ctgcacctga tcgagcaccg cttctttggg cacgctattc gcccgcttca
      841 agtcagcgat ctggatcacc gcgtttttga cttcgccttg actcccaacc acgagcaccg
      901 gatcgagctt ggagtcgcca cacacttcct tatctttgcc gatggtcact ttacccgacg
      961 caacagtgcc tttgaacaca actttgccgg tgatcgtgcc aaccccctgc cccggagtcg
     1021 aattgtttgg cgtcggcgtt gccggcgtac ttggcgctgc tgccacggcc ggcggctcgg
     1081 aaggcggcgc cggcgcgcgg ctttcttcct ttgaacaacc agccaacaat acgacgagaa
     1141 cagttagcag attattaaac caacgagatg cagtcatcgc aagttcctcc ccggcactag
     1201 attacaaaac tctcctgtcc gcacaagctc aatgcgcgga aacgcggcgc tcgccgcgca
     1261 gcgcggacaa cagcatcgcc agcagcgcca tagatccgcc gatcatgaag ctgaagttca
     1321 tcgagcgcac gaacatctcc gggttggccg cggtcgctgt tgcggtcgga tcgccggtga
     1381 agtaacggaa cgatgcggtc aaaagcatgg tgccgaggga aacaccgaac gtcgtgccca
     1441 gaccgaacat gacatagatc gccccggtgg caacgccgcg atgctgcgtc ggcacggagg
     1501 taatcatcgc cgtgtggttc gaggtaaaaa atagcgatgt cgccagtccc cataaaccga
     1561 ggaccagcac cgcggacaaa caatgggaat cggtgcgcag ataagagccg acgaagccgg
     1621 cgcaggcaag aaacgcaatg cctgccgtcg ccggtaaacg cggcccgacc ttgtccaccg
     1681 cccagccgac caacggcgaa agcgtcacgg taaagatcgg cgcgctgacg aacagcaagc
     1741 caatgaaaga aggtttcagt ttaagcacgt cttggagata aaacggcaag acgaagccta
     1801 tcatcacttg ggcgaccccg acgagcaaaa gcgccagacc gctcagcgtg aacatgcgaa
     1861 tgcgaaatag cgatagatcg aggatcgggc tcgccgcagt tttctcccgg tagagaaaac
     1921 cgagaaagac gacgaagaaa cccaccacta gagccacgcg cagccccggt gcgagcgact
     1981 ccatgatgcg gtgatcgacg gcggcgatca aagcgatggt cgcgccgatc aacaacaacg
     2041 cgccccaata atcgacgctg cggtctgcca ccggcgctgg cggcg
//
LOCUS       DATIRS010000925         1978 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1347566, whole genome shotgun sequence.
ACCESSION   DATIRS010000925 DATIRS010000000
VERSION     DATIRS010000925.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1978)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1978)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1978
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1347566"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1524)
                     /locus_tag="VLM90_11690"
     CDS             complement(<1..1524)
                     /locus_tag="VLM90_11690"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF003218.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase VI subunit B"
                     /protein_id="HSQ13679.1"
                     /translation="MSKPMPKAESAATPAAPAEPRKAVTAAEMGARQREISVSEFFTK
                     NRHLLGFDSPRKALLTCIKEAVDNALDACEEAGILPEVIVKLEVVSNNGVTPAPSQAT
                     RFRVTVIDYGPGIVRQQIPPIFAKLLYGSKFHRLRMSRGQQGIGISAAGMYAQLTTGK
                     PVQIISRTSAKAPAHYFEVQIDTKKNEPRIFENKKIDWENHRGTQVSLEIEGRYQKGR
                     ASVDEYLEQTAIANPHVKLVYHTPEGEIKQYPRTIDELPPQPREIKPHPYGIEFGMML
                     KMLHDTKSHSLVGFLASEFSRVSSSLAQDICKTAKLSPNAKPRDLHGAAAETFYKAIQ
                     STKIMAPPSNCISPIGERAILHGLYKQIKGEFYTAVTRPPAVYRGNPFVIEAGLAFGK
                     APEQAVKLKAQDIPLAEGEDRDDDSELASVIRYANRVPLLYQQSACATFKAVLDTSWR
                     NYGVAQSRGALPAGPMVIFVHMASVWVPFTRESKEAIADYDEIRKEIKLALQECGRRL
                     "
     gene            1623..1883
                     /locus_tag="VLM90_11695"
     CDS             1623..1883
                     /locus_tag="VLM90_11695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13680.1"
                     /translation="MQKWIKRSRYGRLMFANDYSRAAKLVNGSKEYFSTNQSEIAVRI
                     DISILDADIRAQDMFQEKSRSVIPAQAGIQTHHPPGYRFSTV"
BASE COUNT          370 a          546 c          598 g          464 t
ORIGIN      
        1 cagccgccgg ccgcactcct gcaaggcgag tttgatttct tttctgatct cgtcgtagtc
       61 ggcgatggct tctttggact ctctggtgaa gggcacccag accgacgcca tgtgcacgaa
      121 gatcaccatc ggtccggcgg gcaaggcgcc gcgcgactgc gccacgccgt agttacgcca
      181 actggtgtcg aggaccgctt tgaaagtcgc gcaggcggac tgctggtaga gcagcggcac
      241 gcggttggcg tagcggatca ccgaggctaa ttcgctgtcg tcgtctctgt cttcgccttc
      301 ggcgagcggg atgtcttgcg cctttaactt gaccgcttgt tcaggcgctt tgccgaaggc
      361 caagccggct tcaatcacaa atggattgcc gcgatagacc gccggcggcc gggtcacggc
      421 ggtataaaat tcgcccttga tctgtttgta caatccatgg agtatcgccc gctcgccgat
      481 gggcgagata cagttactcg gcggcgccat gatcttggtc gactggatcg ccttgtaaaa
      541 ggtttcggcg gcggcgccgt gcaggtcgcg cggcttggcg tttggcgaaa gcttggcggt
      601 cttgcaaatg tcctgcgcca gactcgacga cacccggcta aactcgctgg cgagaaatcc
      661 caccagggag tggctcttgg tgtcatggag catcttcagc atcatgccaa attctattcc
      721 atagggatgc ggcttgatct cgcgcggctg cggcggcagc tcgtcaatgg tccgcgggta
      781 ttgtttaatc tcgccttccg gcgtgtggta gacgagtttg acatggggat tggcgatggc
      841 cgtttgttcc aggtattcgt ccaccgaggc gcggcccttt tgatagcgcc cttcgatttc
      901 caaactgacc tgggtgccgc gatgattttc ccagtcgatc tttttgttct cgaaaattcg
      961 cggctcgttt ttcttggtat cgatctgcac ttcgaaatag tgcgccggcg ccttggcgct
     1021 ggtgcgcgaa atgatctgca ccggcttgcc ggtggtgagc tgggcgtaca tgccggcggc
     1081 ggagatgccg atgccttgct ggccgcggct catgcgcagg cgatgaaact tcgaaccgta
     1141 gagcagcttg gcgaagatcg gcgggatctg ctggcgcacg atgccgggac catagtcgat
     1201 gacggtgacg cgaaagcgcg tcgcctggct cggcgccggc gtgacgccat tgttggaaac
     1261 gacttcgagc ttgacgatga cttctggcaa aatgcccgcc tcttcgcagg catccagcgc
     1321 attgtcgacc gcttccttga tacaggtgag cagcgccttg cgcggactgt cgaaacccaa
     1381 caggtggcga ttcttggtaa aaaactccga tacggaaatt tctctctggc gcgcgcccat
     1441 ctcggcggcg gtgacggctt ttctcggttc ggccggcgcc gccggtgtgg ctgccgactc
     1501 ggcctttggc atgggtttag acatcgttcg ttcgcttctc catggatgat ttcgacgctc
     1561 gagttcagtg atttagcggc agcgttgggc gccgccctaa actcgtgtga cgcgataatt
     1621 gaatgcaaaa gtggatcaaa cgctcacgct acggaaggtt gatgttcgcc aacgattata
     1681 gcagagcggc aaaacttgtg aatggctcga aggaatattt ttccacaaat cagagcgaga
     1741 tcgcggttag gattgatatc agcatcctgg atgccgacat ccgtgctcag gacatgtttc
     1801 aggaaaagag ccgatccgtc attccggcgc aggccggaat ccagacccat catccacctg
     1861 gataccgttt ttcaacggta tgacggactc tgtcagtcac ctggattccc gttttcacgg
     1921 gaatgacgaa taagaatcta tggacttcga gtcgacgcaa tcggaatcct tcggcttc
//
LOCUS       DATIRS010000926         1611 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1249799, whole genome shotgun sequence.
ACCESSION   DATIRS010000926 DATIRS010000000
VERSION     DATIRS010000926.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1611
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1249799"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            94..843
                     /locus_tag="VLM90_11700"
     CDS             94..843
                     /locus_tag="VLM90_11700"
                     /inference="COORDINATES: protein motif:HMM:NF015057.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing redox enzyme family protein"
                     /protein_id="HSQ13681.1"
                     /translation="MFTLDHKLSPDEFITTFFEVNRRDHQRPPHPWEELFRNGKCTKE
                     QLQGWGKERYYFTKQVPVKEYSILYNCPHTDVRRMWLPKAIEEEGEDLIGKSGKPHPE
                     YWLDVCVGMGMDREFVKNSEPLYGVKFAVDSFANAAFKTSWLLGVAVSEGDDTAKAMS
                     RDLDIFRKHYQWVPDDTLTFYKLHAEVDQEHGLLRKEILKKYADTKELQEACINAQLM
                     KNSMRWVMADCIYMEYVVRAAKLNNSAAAAA"
     gene            944..>1611
                     /locus_tag="VLM90_11705"
     CDS             944..>1611
                     /locus_tag="VLM90_11705"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13682.1"
                     /translation="MLLILAISSISSTSLAGAAPIRIAYSSISAAMLPLFVAKDKKLF
                     DKQGVDVEITYIRGIAIEALIANEVQFTRASPPTVVGATLRGADLAVIANTINVPVFS
                     LMARADLRRPEDLRGKKIGVTSLGDSPDLVLSMILDKFGLQRGRDVTVMAIRGGMPDM
                     ILAVSKGFVDGAMISAPSNLRGMKLGLRELIDSADLGVPYLNSPLSTRRAFVKTNRDI
                     VLKVL"
BASE COUNT          369 a          511 c          424 g          307 t
ORIGIN      
        1 cgcagggata acagccgtcg agcgaatagg ttttagtggc gcatcctgct gcgccctctg
       61 ctacccgcga tgacgcacaa ggagccgcga tctatgttca cgctcgatca taaactcagc
      121 cctgacgaat tcatcactac cttcttcgaa gtcaaccggc gggaccacca acgcccaccc
      181 cacccttggg aagagctatt tcgcaacggc aaatgcacca aggagcaact ccagggttgg
      241 ggcaaggagc gctactactt caccaagcaa gtgccggtga aggagtattc gatcctctat
      301 aactgcccgc acaccgacgt gcgccgcatg tggctgccca aagccatcga agaagaaggc
      361 gaagacctga tcggcaaatc cggcaaacct catccggaat attggctcga tgtctgcgtc
      421 ggcatgggca tggaccgcga gttcgtaaag aactccgagc ccctctacgg cgtcaagttc
      481 gccgtcgaca gcttcgccaa tgccgccttt aaaacctcct ggctcctcgg cgtcgccgtc
      541 tccgaaggcg acgacaccgc caaggcgatg tcgcgcgact tagatatttt tcgtaaacac
      601 taccaatggg tgcccgacga caccctgacg ttttacaaac tgcacgccga agtcgatcag
      661 gaacatggct tgctgcgcaa agaaattttg aaaaaatacg ccgacaccaa agagctgcaa
      721 gaagcctgca tcaacgccca actgatgaaa aacagcatgc gctgggtgat ggccgactgc
      781 atctacatgg agtacgtcgt ccgggccgcg aagttgaata acagcgccgc ggcggcggcg
      841 tgaagctatg ctgagatatt ctgtcatccc gagcaaagcg agggatctcg tcccatcggc
      901 cgcttacaaa gacgagattc ctcggctacg cctcggaatg acaatgctcc tcatcctcgc
      961 aatctctagc atctcatcaa cgagtctcgc cggcgcggcg cccattcgca tcgcctacag
     1021 ctccatcagc gccgccatgc tgccgctgtt cgtcgccaaa gacaaaaagc ttttcgacaa
     1081 acaaggcgtc gacgttgaaa taacctacat ccgcggcatc gccatcgaag cgttgattgc
     1141 caacgaagtg caattcaccc gcgcctcgcc gccgaccgtt gttggcgcca cactgcgcgg
     1201 cgccgatctc gcggtcatcg ccaacacgat taacgtgccg gtgttttcct tgatggcccg
     1261 tgccgacctg cggcgtccgg aagatctccg aggaaagaaa atcggcgtga ccagcctggg
     1321 cgattcgccg gatctagtgc tcagcatgat tttagacaag ttcggcttgc agcgcggccg
     1381 ggacgtcact gttatggcga ttcgcggcgg catgcccgac atgatcctcg ccgtcagcaa
     1441 gggtttcgtc gacggcgcca tgatctcggc gcccagcaac ttgcgcggca tgaaattggg
     1501 cctgcgcgag ctcatcgact ccgccgacct aggcgtcccc tatctcaatt caccgctcag
     1561 cacccggcgg gccttcgtca agactaatcg cgacatcgtg ctcaaagtgc t
//
LOCUS       DATIRS010000927         1922 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1642854, whole genome shotgun sequence.
ACCESSION   DATIRS010000927 DATIRS010000000
VERSION     DATIRS010000927.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1922
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1642854"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(2..946)
                     /locus_tag="VLM90_11710"
     CDS             complement(2..946)
                     /locus_tag="VLM90_11710"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13683.1"
                     /translation="MKIHRLLGIVTIFSFGSLAGSAARAEERVRVALSVRNVVFLPFY
                     YAKALRIYDKYGLNVELIQMRSDLQLAGLVSGEIDYTPSVGPAGTAIANSLPIKALAI
                     LYRAPLFSLVSPAGIANVKELEGKKVAVSRIGSESHRYGSLMIESAGADPKKVTFIQT
                     GSTSISLAAIQQGTVNAAVLSPPFTGMMAEKGYKILARSRSLAEAPWLGLVANRQKIE
                     KQPEQVRNMLRSMRDVVAAMRRDRAGVIAHIEKEFKVSTANATESYEDIMGVTVDNLT
                     LRDEQIQKYLDNSLARGEIAKRLTVNEMFDFSLLRSLK"
     gene            complement(952..1878)
                     /locus_tag="VLM90_11715"
     CDS             complement(952..1878)
                     /locus_tag="VLM90_11715"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF012904.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HSQ13684.1"
                     /translation="MTEQIRGIVLPSPTVFREDGRIDEPLMRELTDWFVASGVQAFFI
                     LGSYGQGPAMHPEERKNVAEIVVQQVKHRVPVVVHIGAVDPYTAIDLGQHAKAIGAEA
                     IGHVGPYYYADRSEYEIIEHIKMVDRAVGMPMLIYNNPRYSGYNIQPNFMARLVEAVP
                     NIFGAKLAMGSVDEAMAYMKAVKAPFAPYALASNLVSAMSVGVAGTISPPLAVTPEIG
                     VELVRAIDAGDAGRALALQKDVIRIHDIFLRLAGPFGRTIYREAMRLRGFDVKMYPRW
                     PSKPLSREAYDELRDLFTELKIIAVAGQVRSA"
BASE COUNT          408 a          593 c          525 g          396 t
ORIGIN      
        1 cctatttcaa gctacgcaac agcgagaaat cgaacatttc attaaccgtc agccgcttgg
       61 cgatttcgcc gcgggcgagt gagttgtcga gatatttttg aatctgctca tcgcgcaggg
      121 tcaagttatc cacggtcacg cccatgatgt cctcgtagga ttcagtggcg ttagcggtgc
      181 ttactttgaa ctctttctcg atatgtgcga tcacaccggc gcgatcgcgg cgcatcgccg
      241 ccacgacatc gcgcatggag cgcagcatat tgcgcacctg ttccggctgt ttttcgatct
      301 tctggcggtt ggcgaccaga ccgagccaag gcgcttccgc cagcgaccgg ctgcgcgcga
      361 gaattttata acctttctcc gccatcatgc cggtaaacgg cggacttaag accgccgcgt
      421 tgacggttcc ctgctggatc gccgccaggc taatcgacgt gctgccggtt tgaatgaacg
      481 tcaccttctt gggatcggcg ccggcgcttt cgatcatcag cgagccgtag cgatggctct
      541 ccgaaccgat gcgcgacacc gcgacttttt tgccttccaa ctctttcacg ttggcgatgc
      601 ccgccgggct gacgagagaa aacagtggcg cgcgatatag gatcgccaag gcttttatcg
      661 gcaacgagtt ggcgatcgcc gtgcccgccg gtcccaccga tggcgtgtaa tcgatctcgc
      721 ctgaaaccag accggccaac tgcaagtcgc tgcgcatctg aatcagctcg acattgaggc
      781 catatttatc gtagattcgc agcgctttgg cataatagaa tggcaggaag accacgttgc
      841 gcaccgacaa cgcgacccgc acacgctctt cagcgcgggc ggcggagccg gcaagcgagc
      901 caaaactgaa aatggtaacg atcccaagca gtcggtgtat cttcatgcct cctacgcact
      961 cctcacttga ccggccacgg cgataatttt cagttcggtg aacaagtcgc gcagctcgtc
     1021 gtaggcctcg cggctgagcg gcttggacgg ccaacgcgga tacattttca cgtcgaaacc
     1081 gcgcagccgc atcgcttcgc gatagatcgt ccggccgaat ggaccggcca agcgcagaaa
     1141 aatatcgtga atccggatca cgtctttctg caacgccaga gcgcgcccgg cgtcgccggc
     1201 atcgatggcg cggaccaact cgacgccgat ttccggcgtc accgccaaag gcggactgat
     1261 ggttccggcg acacccaccg acatcgctga aaccaagttg ctcgccaatg cgtagggcgc
     1321 gaaaggcgcc ttaaccgcct tcatgtaagc catcgcttcg tcgacgctgc ccatcgccag
     1381 cttggcgcca aaaatatttg gcaccgcttc gaccagacgc gccatgaagt tgggctgaat
     1441 gttatagccg gaatagcgcg ggttgttgta gatcagcatg ggcatgccaa cggcgcggtc
     1501 gaccatctta atatgctcga taatctcgta ctccgagcgg tcagcgtaat agtacggccc
     1561 gacatggccg atggcctcgg caccgatcgc cttggcatgt tggccgagat cgatggcggt
     1621 ataaggatcg accgcgccga tatgcaccac caccggcacc cgatgcttca cttgttggac
     1681 aacgatctcg gcgacgtttt tgcgctcctc cggatgcatc gccggcccct ggccgtagga
     1741 gcccagaata aaaaacgcct gcacgccgct ggcgacaaac caatcggtca gctcacgcat
     1801 gagcggctca tcgatcctgc catcctcgcg aaacaccgtc ggactcggta acacaatccc
     1861 cctaatttgt tccgtcataa gcaacctccg acatggtttg gaaagattat tttaccacga
     1921 ag
//
LOCUS       DATIRS010000928         1631 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_68675, whole genome shotgun sequence.
ACCESSION   DATIRS010000928 DATIRS010000000
VERSION     DATIRS010000928.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1631)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1631)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1631
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68675"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..268
                     /locus_tag="VLM90_11720"
     CDS             <1..268
                     /locus_tag="VLM90_11720"
                     /inference="COORDINATES: protein motif:HMM:NF013401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HSQ13685.1"
                     /translation="EEYSDLSEVLRRAIEITKQVYQPGGVNVGMNLGKCAGAGIDDHL
                     HWHIVPRWEGDTNFMPVIGETRVMPQHLADSYDRLAPHFQKLMV"
     gene            357..>1631
                     /locus_tag="VLM90_11725"
     CDS             357..>1631
                     /locus_tag="VLM90_11725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13686.1"
                     /translation="MSEAKTLGELKKSGVAVLSVRDEMRKNLVRHLESGERILPGIVG
                     YEDTVIPEIENAILSGHHMVFLGERGQGKSRIIRGLLSLLDERIPIVDGCEINDSPVA
                     PICSGCRKKAAEMGDALPLRWIDRDQRYGEKLATPDVSIADLVGEIDPIKVAEGRYLA
                     DEETIHYGLVPRTNRGVFAINELPDLTEKVQVGLFNLMEEKDVQIKGYKIRLPLDVVI
                     VASANPEDYTSRGRIITPLKDRFDVQIRTHYPKKIEDEISIMEQEALWTDQRSRKVEV
                     PRFMKEILGHLTFEARKSNEINQSSGVSVRVTINNYESLISNAEKRSLRCKENDIVPR
                     VSDLHALMASTAGKIEMEYVGEEKKEDDLVEKLINRSIVKVFDQHFSLNSLQKVIEYF
                     NSGWGVEVSDQMAAQDYLEGIKEIPGLKEAIKT"
BASE COUNT          406 a          462 c          481 g          282 t
ORIGIN      
        1 ggaagagtat agcgatctga gcgaggtgtt gcgccgcgcc atcgagatta ccaaacaagt
       61 ctatcagcct ggcggcgtca acgtcggtat gaatctcggc aagtgcgccg gcgccggcat
      121 cgacgaccat ctgcactggc atatcgtgcc gcgctgggaa ggcgatacta atttcatgcc
      181 ggtcatcggc gaaactcggg tgatgccgca gcacttggcg gacagctacg accggctggc
      241 gccgcatttt caaaaactta tggtttaatt gtgcaagagc aacgtgatag cttggccctg
      301 ccaggcgaaa aaccggaacc gtcaataaca actcttccaa gggggggcca agtcaagtga
      361 gcgaggcaaa aacattaggg gaactgaaaa aaagcggggt ggcggtgttg tctgtgcgcg
      421 acgagatgcg caaaaatctg gtgcgccatc tggaaagcgg cgagcgcatc ctgccgggaa
      481 tcgtcggcta cgaggacacg gtcataccgg aaatcgaaaa tgcgattctg tccggccatc
      541 acatggtgtt tttgggcgaa cgaggccaag gcaaatcgcg catcatccgc ggcttgttga
      601 gcctgctcga cgagcggatt cccatcgtcg acggctgcga aatcaacgac agcccggtgg
      661 cgccgatctg cagcggctgc cgcaagaagg cggcggaaat gggcgatgcc ttgccgctgc
      721 gctggatcga ccgcgaccag cgctatggcg agaagctcgc cacgcccgat gtctccatcg
      781 ccgacctggt cggcgaaatc gatccgatca aagtcgccga agggcgctat ctcgccgacg
      841 aggaaaccat ccattacggc ttggtgccgc gcaccaaccg cggcgtcttc gccatcaacg
      901 agctgccgga tttgaccgaa aaagttcaag tcggcttgtt caacctgatg gaagaaaaag
      961 acgtccaaat caaaggctac aaaatccgcc tgcccctcga tgtcgtgatc gtcgccagcg
     1021 ccaacccgga agattacacc agccgcggcc ggatcatcac cccgctcaag gaccgcttcg
     1081 acgtgcagat ccgcacccac tatccgaaga agatcgaaga cgaaatcagc atcatggagc
     1141 aagaggcgct gtggaccgac cagcgcagcc gcaaggtcga agtgccgcgc ttcatgaagg
     1201 agatcctcgg ccatctgacc ttcgaggcgc gcaaatccaa cgagatcaac caatcgtcgg
     1261 gcgtcagcgt gcgcgtgacc atcaacaact atgagagctt gatcagcaac gccgaaaagc
     1321 gctccttgcg ctgcaaggag aacgacatcg tgccgcgggt gagcgatctg cacgcgctga
     1381 tggcgtcgac cgccggcaag atcgagatgg aatatgtcgg cgaagagaag aaggaagacg
     1441 atttggtcga gaagctgatt aaccgctcca tcgtcaaggt cttcgaccag catttcagcc
     1501 tcaactcgtt gcagaaagtg atcgagtatt tcaactccgg ctggggcgtc gaagtctccg
     1561 accagatggc cgcgcaggat tatctcgaag gcatcaagga gattcccgga ctcaaggaag
     1621 cgatcaaaac t
//
LOCUS       DATIRS010000929         2472 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_68735, whole genome shotgun sequence.
ACCESSION   DATIRS010000929 DATIRS010000000
VERSION     DATIRS010000929.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2472)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2472
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68735"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1530)
                     /locus_tag="VLM90_11730"
     CDS             complement(<1..1530)
                     /locus_tag="VLM90_11730"
                     /EC_number="2.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016744 - transketolase or transaldolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HSQ13687.1"
                     /translation="MTQSIDQLSINTIRTLSMDAVQQANSGHPGTPMSMAPVMYGLWQ
                     RHLKYDPADPLWPNRDRFVLSIGHASMLLYSTLYLAGVRALDSRRQVLNQPTLTLDDL
                     KNFRQLDSKTPGHPEFGLTAGVETTTGPLGQGVANSVGMAIASKWLGSYFNRPGLELF
                     DYAVYALCGDGDMMEGISSEAASLAGHLKLGNLCWIYDSNRISIEGSTSLALSEDVGK
                     RFEAYGWNVLHVADANDQAALDGALGNFRQCKDRPTFIVIESHIAFGAPTKQDTAAAH
                     GEPLGDGEIKLTKKNYGWPEDEKFFVPEGVQENFQRVLDKRGRALRDEWTGKFAEYQK
                     KYPELAEQLTTMQRRELPAGWDKELSEYPADPKGQATRDSSGKVLNAIAKHVPWLMGG
                     SADLAPSTKTRLTFDGVGDFAAGSYGARNFHFGVREHVMAAIVNGMSLCGVRAYGSGF
                     LIFSDYARPAIRLGAIMEIPAIHVFTHDSIGVGEDGPTHQPVEQLASLRAIPGLITLR
                     PG"
     gene            complement(1701..2402)
                     /locus_tag="VLM90_11735"
     CDS             complement(1701..2402)
                     /locus_tag="VLM90_11735"
                     /inference="COORDINATES: protein motif:HMM:TIGR04282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04282 family arsenosugar biosynthesis
                     glycosyltransferase"
                     /protein_id="HSQ13688.1"
                     /translation="MPIPANALAIMAKAPVAGGVKTRLVPPLTPAQAAEFYRALLLDQ
                     FDHLRHYAGAERYVFYAPAEAGNILRELGGDDYGYLAQCDGDLGARMQHIFTELRRLG
                     HRNIILIGSDLPALPWAILDEGFAQLAQAQPQVILGPSRDGGYYLVGLNRPTPEIFQQ
                     MTWSHDQVLAETQARLRALAVPFGLLPGLFDFDTVEDLRDWRDAKDMVSSAAMPRTRE
                     YLKKLTDSDCLDPAD"
BASE COUNT          502 a          760 c          727 g          483 t
ORIGIN      
        1 cccagggcga agcgtaatca gacctggaat cgcccgtagc gacgccagct gctccaccgg
       61 ttgatgtgtc ggaccgtctt caccgacgcc aatggagtca tgggtgaaga cgtgaatcgc
      121 gggaatctcc ataatcgccc caagccggat cgccggtcga gcgtaatcgc taaagatgag
      181 aaatccggaa ccgtaggcgc gcacgccgca cagcgacatg ccgttgacga tcgccgccat
      241 gacatgctcg cgcacgccga agtgaaaatt gcgcgcaccg tagctgcccg cggcgaaatc
      301 gccgacgccg tcaaaggtca ggcgcgtctt agtcgatggc gcaagatcgg cggagccgcc
      361 catcagccaa ggaacgtgct tggcgatggc gttcaaaacc ttgccggaag aatcacgcgt
      421 cgcttggccc tttggatcgg ccggatactc gctcaattcc ttgtcccaac ccgccggcag
      481 ttcgcgccgc tgcatggtcg tcaattgctc ggcgagttcg gggtattttt tctggtactc
      541 ggcaaacttc ccggtccact cgtcgcgcag cgcgcggccg cgtttatcga gaacccgttg
      601 gaaattctcc tgcaccccct cgggaacgaa aaacttctca tcctccggcc agccatagtt
      661 tttcttggtc agtttgatct cgccatcgcc cagcggctcg ccatgagcgg cggcggtgtc
      721 ctgcttggtc ggcgcgccaa aggcgatatg gctttcgatt acgataaacg tcggccggtc
      781 cttgcactgg cggaagttgc ccagcgcccc atcgagggcg gcctggtcgt tggcatcggc
      841 gacatgtaaa acgttccagc cataggcctc gaaacgtttg ccgacatctt ccgacagcgc
      901 caagctggtg ctgccttcga tggagatccg gttgctatcg tagatccagc aaagattgcc
      961 tagtttcaaa tggccggcga gggacgccgc ttcgctgctg atcccttcca tcatatcgcc
     1021 gtcgccgcac agcgcgtaaa ccgcgtaatc gaacagttcc aagccgggcc ggttgaaata
     1081 gctgccgagc catttcgatg cgatcgccat gccgacactg ttagccacgc cctggccgag
     1141 cggcccggtg gtggtctcga cgccggcagt gaggccgaac tccggatggc cgggggtttt
     1201 actatccagc tggcgaaagt tttttagatc gtcgagggtc agcgtcggct gattgagcac
     1261 ctgccgacgc gaatccagcg cgcgtacgcc ggccaaatac aacgtcgaat agagcaacat
     1321 cgaggcatgg ccgatggaca gcacgaagcg gtcgcgattg ggccacagcg gatcggcggg
     1381 atcgtatttt aaatggcgct gccacaagcc atacatcacc ggcgccatcg acatcggcgt
     1441 gccgggatgg cccgagttcg cctgttgcac cgcgtccatg gacagcgtgc ggatggtatt
     1501 gatggacaat tgatcgatcg actgagtcat atgatctgcc tgttctaacc ggccctgacc
     1561 ggtgcggttg gtttcaagcg tacccttatc actttcgttt ctccacgtca gcagcgcccc
     1621 ggcagtaatc ggcggttctt taaggaaatg taatgggtag ctctgagact ttcgacatag
     1681 ggcggcgccg gccgaccggc tcaatccgca gggtcgagac agtctgagtc ggttagtttt
     1741 ttcaaatatt cgcgggtccg cggcatcgcc gccgagctca ccatgtcctt ggcatcgcgc
     1801 cagtctcgca aatcctcgac ggtgtcaaaa tcgaacagtc cgggcagcaa accgaacggc
     1861 acggcaagcg cgcgcaaacg cgcctgggtc tcggctaaca cttggtcatg gctccaagtc
     1921 atctgctgaa agatctccgg cgtcggtcga ttcaagccga ccagataata accgccgtcc
     1981 cggctcggtc ccaagatcac ctgcggttgc gcctgggcca attgcgcgaa gccttcatcg
     2041 agaatcgccc aaggcagcgc cggcaaatcg ctgccaatga gaatgatgtt ccgatgcccc
     2101 aagcgccgca gctcggtgaa aatatgctgc atgcgcgcgc cgagatcgcc gtcgcattgc
     2161 gccaggtagc cgtaatcgtc gccgccgagc tcacggagaa tattgccggc ttcggccggt
     2221 gcgtagaaca catagcgctc ggcgccggcg taatgtctca aatggtcgaa ttgatcgagc
     2281 aggagcgcgc gatagaactc cgccgcttgc gccggcgtca gcggcggcac caagcgggtc
     2341 ttcacgcccc ccgccaccgg cgccttggcc atgatcgcga gtgcgttagc gggtatcggc
     2401 ataaaactgt ttcaagcgca gaggcgatac cccgatcaag taaagcagct tcagcgtcca
     2461 catgcgaaaa at
//
LOCUS       DATIRS010000930         3326 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_758174, whole genome shotgun sequence.
ACCESSION   DATIRS010000930 DATIRS010000000
VERSION     DATIRS010000930.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3326)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3326
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_758174"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(74..1093)
                     /locus_tag="VLM90_11740"
     CDS             complement(74..1093)
                     /locus_tag="VLM90_11740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13689.1"
                     /translation="MVACSFGLSLLLANLQPALAQDFYKDKTIRFIVGQAAGGGYDTY
                     TRTIARYIGKHIPGGPTTVADNMTGAGSLVAANYIFNNAKPDGLTVGMWNSALVFNQA
                     MGDRNVKFDARKFGWLGAPSKSVPVCLVMGFAGPKTMDEIVKSANPLRMGGTGPGSHS
                     IDMPLLLNKTLGSKFAVVSGYQGTAQIKIALQRREVDGHCTNWDSILETQKDLLDGKG
                     EDRLIPLLLHARVPEAEAKGVTLVSEAIKDENHLRAYRAYMAQMEYSRPFTIAPNTPK
                     DRLEILRRAFKATLADGDFLAQAAKLKLDINYVPGEECEKWVDEVLSLPPKMKEELKY
                     LSPVQ"
     gene            1388..2047
                     /locus_tag="VLM90_11745"
     CDS             1388..2047
                     /locus_tag="VLM90_11745"
                     /inference="COORDINATES: protein motif:HMM:NF016269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-binding SYLF domain-containing protein"
                     /protein_id="HSQ13690.1"
                     /translation="MKTRLILFAIAVFALFSVATTVHATMQDDVDQALSIIERFGEIP
                     ETAIPPAVMRDAKGVAIFAMTKAGFVVSGRGGTGVVLARTPTGWSGPSAIGTGGVGVG
                     FQAGVQVTEHVIILNTPEAIKAFTQGTNFTLGANLSVAVGPVGRSAEAGVAPKAAIYT
                     YSRSQGIFAGVSLEGTAVATRYEANEQFYGKPVYPADILEGKIAPPASAQKLLDALAK
                     Y"
     gene            2387..>3326
                     /locus_tag="VLM90_11750"
     CDS             2387..>3326
                     /locus_tag="VLM90_11750"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ13691.1"
                     /translation="MTDSEPPIKPAKFFYGWTIVAVGFLAHIASAFTISSTLSVFLKP
                     LSSDLGVSRGVFSLVRSGEVLIGAVAAPLVGTLLDRHGCRGLMAAGGVIVGLGLLLLG
                     QVRDFWQFLLVRWLILSPGDTLMGNMVVNVTISRWFIRMRGRALAFAGMGHGLAKVLM
                     PLCAASLIASAGWRGTWVVFGLLTLTLVVGPSLLFMRRSPEDLGLLPDGKLAADNDSG
                     GVTADGKNKKFNRAATDDVEWTRGEALRTPAFWLIVTTFGVAHIGVSGLNLHVFSFVS
                     DQGHPATVAALVMSTIAIMQFSTPIVWGLCAERISIG"
BASE COUNT          620 a          924 c         1002 g          780 t
ORIGIN      
        1 taatatttcc caaaccttcg cgtcattcgc gccttcgtgg tgagataatt tcacagtaaa
       61 cctgggagta caattattgc accggcgaca aatacttcag ctcttccttc atcttgggcg
      121 gcagcgacaa cacttcgtcc acccactttt cgcattcttc gccgggcaca tagttgatgt
      181 cgagtttcaa tttagcggct tgggcgagga aatcgccatc ggccaaggtc gctttgaagg
      241 cgcgccggag gatctccagg cgatctttcg gcgtgttggg cgcgatggtg aacgggcgcg
      301 agtattccat ctgcgccatg taggcgcgat aggcgcgcag gtgattctcg tctttgatcg
      361 cctcgctgac gagggtcacg cctttcgctt cagcttcggg cacgcgggcg tgcaggagca
      421 agggtatcaa acggtcttcg cctttgccgt cgagcaagtc cttttgcgtc tccaagatcg
      481 agtcccagtt ggtgcagtgg ccatcgacct cgcggcgctg caaggcgatc ttgatttgcg
      541 ccgtgccctg gtatcccgat accacggcaa atttgctgcc gagggtttta tttagcaaca
      601 gcggcatgtc gatactgtgc gagcccggtc cagtgccgcc catgcgcagt ggattggccg
      661 atttgacgat ctcgtccatg gtctttggcc cagcgaaacc catcaccagg cataccggca
      721 cgctcttgct cggcgcgccg agccagccga acttgcgcgc gtcgaacttg acgttgcgat
      781 cgcccatcgc ctgattgaaa accagcgcgc tgttccacat gccgacggtc aagccgtccg
      841 gcttggcgtt attgaaaata taattggccg ctaccaagct gccggcgccg gtcatgttgt
      901 cggcaacggt ggttggcccg ccggggatat gtttgccgat gtagcgcgcg atggtgcgcg
      961 tgtaagtatc gtagccgccg ccggccgcct ggccgacgat gaagcgaatg gttttgtctt
     1021 tgtagaaatc ttgagcgaga gccggttgaa gattcgccag caacagcgac agcccgaacg
     1081 aacacgcgac caaaacgcag gaattggcca gcaattgact tttcgaacct agctgtctgg
     1141 atatcacaaa cggcctccgt ggcttatgcc atgtctctct tgtggcgtct ttgaaatagt
     1201 aatcaacaaa tcggcatgaa atttcaatag ttcacgtgga ttaccgcgtg cccgtgaatg
     1261 acgaaaaaga aaaagttgac ttcaattgcg gcgcattctt gtggcaccgc ctgccatagt
     1321 ttagtctaaa agtaagagat tcttcgcctg cggttcttgt gcattgtcgc cagcgggagg
     1381 gtatacgatg aaaactcgac taattttgtt tgctattgcg gtatttgcgc tgttctctgt
     1441 ggcgactacc gtgcacgcca ccatgcagga cgatgtcgac caagcgttat cgattatcga
     1501 gcgttttggc gagatcccgg agacggcgat tccgccagcg gtcatgcgcg acgccaaggg
     1561 tgtggcgatc ttcgccatga ccaaagccgg tttcgtggtc agcggcaggg gcggaacggg
     1621 agttgtcctc gcgcgcacgc cgacgggttg gagcggtccc tcggcgatcg gtacaggagg
     1681 cgtcggagtc ggcttccaag ccggggtgca ggtcaccgag cacgtgatta ttctcaacac
     1741 tccagaggcg atcaaggctt tcacacaagg caccaatttt acacttgggg ccaatctaag
     1801 cgtcgcggtg ggtccggtcg gtcgttcagc cgaggccggt gtcgcgccaa aggccgcgat
     1861 atacacttac agccgcagcc aaggaatttt tgccggagtg tctctggagg gcacggcggt
     1921 tgcaacccgc tatgaagcga acgagcagtt ttacggcaag ccggtctatc cggccgatat
     1981 tcttgagggc aagattgcgc cgccggccag tgcgcaaaaa ctgttggatg cgctggcgaa
     2041 atactgactc cgccgctgat ccgatttgtc agggataagc cggttgcggg atggatcatt
     2101 cgatggctcg gatatctctc ccgcaaaggc gcaaagacgc taagtgacgg gccgaggccc
     2161 ggcatccgag gggttggaag gattgaagaa agatttctcg cttcggtcga aatgacagaa
     2221 ttaatatgct tcgcgcccta gttgcttagc gcgacatatt ccgaacccgt tttgtgtact
     2281 ttgcgttcta tgcggccatt cggccgattc cgcgtcgtct tcggttacgc taaggctgcg
     2341 ctgtcgtttt gttgcgaagc ttgatacaaa cgacggcgtg caagctttga ccgactctga
     2401 accgccaatc aaacctgcga agtttttcta cggctggacc attgtcgccg tcggttttct
     2461 cgcgcatatc gcctccgctt ttacgatttc gagcacgctc agtgtgtttc tcaaaccgtt
     2521 gtcgagcgat ctcggcgtct cgcgcggtgt cttttccctg gttcgctcgg gcgaagttct
     2581 gatcggcgcc gtggccgcgc cactcgtcgg cacgctgctg gatcgtcacg gttgtcgtgg
     2641 actcatggct gcaggcgggg ttatcgtggg gttgggcttg ctgctgctcg gccaggtgcg
     2701 ggatttttgg cagtttctct tggtccgctg gctgattctc agtcctggcg acacgctcat
     2761 ggggaacatg gttgtgaacg tgacgatctc gcgctggttc atccgcatgc gcggccgcgc
     2821 cctggcgttc gcgggcatgg gccatggcct ggccaaagta ttgatgccgc tgtgcgccgc
     2881 gtcgctgatc gcctccgccg gctggcgcgg cacctgggtg gtattcggcc tgttaacctt
     2941 gacgttggtg gtcggaccgt cgctgctgtt catgcggcga agtcctgagg acctgggttt
     3001 gcttccagac ggaaaattgg ccgccgacaa tgacagcggc ggggtgactg cggatggcaa
     3061 gaataagaaa ttcaatcgag ctgcaaccga cgacgtcgag tggacgcgcg gcgaagcgct
     3121 gcgcacgccg gctttctggc tcatcgtcac gactttcggc gtcgcccata tcggcgtcag
     3181 cgggctcaat ttgcacgtct tctccttcgt cagcgatcaa ggccatccgg cgacggtcgc
     3241 tgccctagtc atgagcacca tcgcgatcat gcagttcagt acgccgatcg tctgggggtt
     3301 gtgcgccgag cgcatcagca tcggcc
//
LOCUS       DATIRS010000931         1616 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1936567, whole genome shotgun sequence.
ACCESSION   DATIRS010000931 DATIRS010000000
VERSION     DATIRS010000931.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1616
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1936567"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1616)
                     /locus_tag="VLM90_11755"
     CDS             complement(<1..>1616)
                     /locus_tag="VLM90_11755"
                     /inference="COORDINATES: protein motif:HMM:TIGR01733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="non-ribosomal peptide synthetase"
                     /protein_id="HSQ13692.1"
                     /translation="YPAARLGFMVADAEIELLLTQRKLARTISPADISLVCLDDADLF
                     AGQSHENPTKLSSAASAAYVIYTSGSTGFPKGVVGRHRGAVNRCAWMWRRYPFRRGEV
                     CCSKTSLSFVDSLWEIFGPLLQGVPLAIADDDTAHDPHALIEFLAHRRVSRIVLVPSL
                     LKAFLDDGADLAVKLPRLKLWTSSGETLTVELAQRFRKNLPEALLLNLYGSSEVAADA
                     SYFEYDGGASGKTVAIGRPIANSMVYLLDAQRRPVPVGVIGELYVGGDGLARGYWRRP
                     ELTAEKFVVNPFSADPGSRLFRTGDLARYRADGNIEYLGRADNQIKIAGQRIELSEIE
                     AALRRHPRIDDCVVNLADHDNGAIGNAPLAHSLVAYLVSPTPPTDRELREYLQQKLPA
                     CMLPAGFVRLERLPLLPNGKLDRCALPELAGAPVKAESKLVGPRSKTEEKVAAIWREA
                     LSLDWIGLDDDFFELGGHSILAMQMVARLRAAFGDEFSLREFFAAPTVAGVAALIRKG
                     ARAALPPILPPILPLPNAGALPVSSAQDLF"
BASE COUNT          356 a          501 c          475 g          284 t
ORIGIN      
        1 gaaaagatcc tgcgccgatg acaccggtaa cgcaccggca ttaggcaatg gcaggatcgg
       61 gggcaggatt ggcggtagcg ccgcgcgcgc gccttttcta atcagagcag cgacgccggc
      121 caccgtcggc gcagcgaaaa actcgcgcag ggagaactcg tcgccgaatg ccgcgcgcaa
      181 ccgcgcgacc atttgcatcg ccaatatcga atggccaccg agttcgaaga agtcatcgtc
      241 gaggccgatc cagtctaaac tcagcgcctc gcgccaaatc gcggcaactt tctcttcggt
      301 tttgctgcgc ggccccacca gcttcgattc agccttcact ggcgcgcctg cgagctccgg
      361 cagcgcgcat cgatccaatt tgccgttggg cagaagcggt aggcgctcca agcgaacaaa
      421 cccagccggt agcatgcaag ccggcagctt ttgctggaga tactcgcgca gctcgcggtc
      481 ggtcggcggc gttggtgata caaggtacgc gaccaaggaa tgcgccaatg gcgcatttcc
      541 gatcgcgccg ttgtcatggt ccgccaagtt cacaacgcag tcgtcgatcc gtggatgcct
      601 gcgcagcgca gcttcgatct cgctcagttc aatgcgctgg ccggcgattt tgatttggtt
      661 atcggcgcgg ccaagatact cgatattgcc atcggcgcgg taacgcgcca agtcgccggt
      721 gcgaaacagc cgggagcccg gatcggcgct aaagggattg acgacgaatt tttccgcggt
      781 cagttccggc cggcgccaat agccccgcgc caagccgtca ccgccgacat acagttcgcc
      841 gatgacgccg accggcacgg gccggcgctg cgcatccaga agataaacca tgctgttcgc
      901 gatcggccgg ccaatcgcca ccgtcttccc tgaagcccca ccgtcatatt caaaatagct
      961 tgcgtcggcg gcgacttccg aggaaccgta gagattgagc aaaagcgcct caggaagatt
     1021 tttgcgaaac cgttgtgcaa gttcgacggt cagcgtctcg ccgctgctgg tccatagttt
     1081 tagccgcggc aacttaaccg ccaggtcggc gccatcatcg agaaaggcct ttagcagcga
     1141 cggcaccaag acaatccggc tcacccgccg atgggcgaga aactcgatca gcgcatgcgg
     1201 atcatgggcg gtgtcatcgt cggcgatcgc cagaggaacg ccttgcagca gcggtccaaa
     1261 gatttcccac aacgaatcga cgaaactcaa cgaagttttg ctgcaacaaa cttcgccgcg
     1321 gcgaaacgga taacgccgcc acatccaggc gcaacgattc accgcgccgc gatgacgccc
     1381 gaccacgcct ttaggaaacc cagtggaacc tgaagtgtag atgacataag cagcgcttgc
     1441 cgcgctggac agtttcgtgg gattctcgtg actctggccg gcgaatagat cggcatcgtc
     1501 gagacaaacc agcgaaatat ctgccgggga aattgtgcgg gcgagcttgc gctgggtgag
     1561 caaaagttcg atctcagcgt cggcgaccat gaaacccaaa cgtgccgccg gataac
//
LOCUS       DATIRS010000932         2114 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1152024, whole genome shotgun sequence.
ACCESSION   DATIRS010000932 DATIRS010000000
VERSION     DATIRS010000932.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2114
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1152024"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            394..1458
                     /gene="ligD"
                     /locus_tag="VLM90_11760"
     CDS             394..1458
                     /gene="ligD"
                     /locus_tag="VLM90_11760"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF045432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-homologous end-joining DNA ligase"
                     /protein_id="HSQ13693.1"
                     /translation="MPMRRHGETAAQKTAKTKASKATTNHHPARRHGSARPTKNAAIA
                     PREIPQGVDSTDLEAGAGTVHLTNLRKVFWPESGITKGALLQFYLDIAPVLLPHLVDR
                     AMVMKRYPNGIAGPFFFMKRAPTPRPAWIDTCNIEHASGNVIDFPIIRDLASLLWVIN
                     LGCIDLNPWYARCDDVDRPDYLHFDLDPVKGATWAQIVETAAVVHAALDQLKLPSFLK
                     TTGSRGCHIYVPIMRGPTQKEVWTVAKQMAITLAKLRPDLITAEYRIDKRQAKRVLVD
                     YNQNAWGRTLASVYSVRPHPRACVSAPITWKELEQGIQIEDLRLDNMPARVKKLGDLW
                     AGLLSPQKRARLETIYHAAD"
     gene            1445..>2114
                     /locus_tag="VLM90_11765"
     CDS             1445..>2114
                     /locus_tag="VLM90_11765"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF006078.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HSQ13694.1"
                     /translation="MLPIEPPFAPMDALAVARIPAGPDWQYEPKWDGFRCIAFKDGGT
                     IDLQSKKTEPLGRYFPELVAVLEQVKADRFVIDGEIVVPAGAAFSFDDLLQRIHPAAS
                     RIAKLSKSHPAKLIVFDLLVEDGKKVAGKPLRERRRLLEKFFQRAMQHPALELSPAST
                     QLKDAEAWLQSAGAVLDGVIAKRLDLAYQSGERTGMQKVKNLRTADCVVGGFRYADQA
                     PVIGS"
BASE COUNT          464 a          654 c          573 g          423 t
ORIGIN      
        1 gcgccaccac caagccatcg gcgttgaggg tttggcgcgc cgcgccagtc actttgccga
       61 tctcgacgat ccgcccgccg ctaaccgcga cgtcgccatg aaagcccggc agcccggaac
      121 cgtcaatcac cttaccgttc ttgataacta gatcgtatgc cattgttcct cctcaggcca
      181 ccggccttgg cgttatcgtt gcgcgtgcgc ggttttgggt caatctcgta gcgaacctat
      241 gcgatgcctc acttgctgtc aatcaatatg acagtgcgca tcgggctgtt tcaactacca
      301 aagatttggg cttgaaccag cattattcag aggtacgcta atataggtag taaagcaaag
      361 aattattcat aacgcgaaac ggaaatacca acaatgccga tgcgacgcca tggcgaaacc
      421 gccgcgcaaa aaactgcaaa gacaaaagct tcgaaggcga cgacgaatca tcatccggcg
      481 cgccgccatg gctccgctcg gccaacaaaa aacgctgcaa tcgcgccgcg ggaaattccc
      541 caaggagtcg acagcacgga tctcgaggcc ggtgccggga ccgttcacct gaccaatctg
      601 cgcaaagtct tctggcccga atcgggtatt accaaaggcg cgcttttgca gttttatctc
      661 gacattgcgc cggtgctgct gccccattta gtcgatcgcg ccatggtcat gaaacgttat
      721 cccaacggca ttgccgggcc gtttttcttt atgaagcgcg cgccgacgcc gcgtcccgct
      781 tggatagaca cttgcaacat cgagcatgcg tccggtaacg tcatcgattt ccccatcatc
      841 cgcgacttgg cgtcacttct gtgggtgatc aaccttggct gcatcgatct caatccctgg
      901 tacgctcgct gcgacgacgt cgatcgcccg gattatttgc acttcgacct cgatccggta
      961 aagggcgcga cctgggcgca gatcgtcgaa accgccgcag tggtccatgc cgccctcgat
     1021 caactaaagc tgccctcttt cctaaagacc accggatcgc gcggctgcca catttacgtg
     1081 ccgatcatgc gtgggccgac gcaaaaggaa gtttggaccg tggccaaaca aatggccata
     1141 accctcgcca agctgcggcc ggatctgatc accgcggaat accgcatcga taagcggcag
     1201 gccaaacggg tgctagtgga ctacaatcaa aatgcctggg gtcgcacgct ggcttcggtc
     1261 tattcagtac gtccccaccc gcgcgcctgc gtctcggcgc cgatcacctg gaaagaattg
     1321 gagcagggta tccaaatcga agacctgcgg ctggacaata tgccggcgcg ggtaaaaaag
     1381 ctcggcgacc tatgggccgg cctgctcagc ccgcaaaagc gcgcccgctt ggaaactatt
     1441 tatcatgctg ccgattgagc cgccgtttgc gccgatggat gctttggcgg ttgcccgcat
     1501 ccccgccggt cccgactggc agtatgaacc gaagtgggac ggcttccgct gtattgcgtt
     1561 caaggatggc ggcaccatcg acctgcaatc gaagaaaacc gagccgttag gccgttactt
     1621 ccctgaacta gtggctgtat tggagcaggt taaagccgat cgatttgtca tcgacggcga
     1681 aatcgtcgtg cccgccggcg cggcattttc tttcgacgac ctgctgcagc gtattcatcc
     1741 ggcggccagc cgaattgcca aattgtccaa atcgcatcca gcgaaactga tcgtcttcga
     1801 cttgctcgtc gaagacggca aaaaagtcgc gggcaaaccg ctgcgagagc gccgcaggtt
     1861 actggagaag tttttccaac gcgcaatgca gcatccggcg ctcgaacttt cgccggcgag
     1921 cactcaactc aaggatgccg aagcatggct gcaatccgcc ggagcagttc tcgacggcgt
     1981 catcgccaaa cgcctggacc tcgcttatca gtccggcgag cgcaccggca tgcaaaaggt
     2041 caagaatctg cgcaccgcgg attgcgtcgt cggcggcttc cgctacgccg accaagcacc
     2101 ggtgatcggc tcac
//
LOCUS       DATIRS010000933         5871 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_266378, whole genome shotgun sequence.
ACCESSION   DATIRS010000933 DATIRS010000000
VERSION     DATIRS010000933.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 5871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5871
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_266378"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(167..1153)
                     /locus_tag="VLM90_11770"
     CDS             complement(167..1153)
                     /locus_tag="VLM90_11770"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HSQ13695.1"
                     /translation="MQYRYLGKNRLKVSAIGYGCPPFQGKLSDADERQAIAVLDRAIE
                     IGMNFIDTADHNNGNNEEILAKVLKGRRGDVVLTSKFGNLRGQPWAEGREVEGKPEYV
                     AWACDNSLRRLQTDYIDLYYLHRVDPKVPIEETVGAMKRLVEQGKVRQLGLSEAGPET
                     LRRANAVHPITAVQSEYSLWTRDYESNTIPVCRELGIGYVAYYALGRGFLSGKWNDFA
                     ELGEKEAKQRGPRFHAGNFQHNASLLKQLEAMASVTKCTVAQLALAWILHQGDFLVPI
                     PGTYKIANLEANAAAADTSLTAEELAEIDRIFPLGAAAGGRHEYDRSKELNI"
     gene            1276..2298
                     /locus_tag="VLM90_11775"
     CDS             1276..2298
                     /locus_tag="VLM90_11775"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ13696.1"
                     /translation="MKNKSLLCSLLLSFGLSFTAQAKAQESFFKGKTIRVVVGGSAGG
                     GYDTYTRVISRHMGKHIPGNPTFVVDNMPGAGSIIAANHVYKVSRPDGLTMCHPVGGI
                     ILQNVLGKAGIEFDSRKFHYVGAPAQDTLSVGVVKSAGIASMEQWIANKTPVKFGGIG
                     PGTGTDDVAKVLRYALGLPIQLVTGYKGTADIRLAVQSGEMQGVVNSWESFKSTWSKE
                     IETGSVNVLLVTIPKRHPELPNVPSISEYVKADEAKKIVQVAVYDYGATARPYLLPPN
                     TPKERVQILRKALAATFKDPDFLADAQRARLDLNPLSGDEMQEAVERLWKLDKPLVEK
                     LKEILK"
     gene            2320..2955
                     /locus_tag="VLM90_11780"
     CDS             2320..2955
                     /locus_tag="VLM90_11780"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HSQ13697.1"
                     /translation="MSDGFLKSLTDKIAPAHTALLVVDVQNDFCHEDGYVAKQGLSVA
                     PAQAIVANLTRLIAAARETNVPVIFVQAIYDDKYLAGPFLEHFSKARVALARCAEGTW
                     GADFYGVKPLASDLRIVKYRYSPFVGTDIDALLKARSVKTLVITGVTTNVCVECTARD
                     GFMRDYYIVLPSDCAASYDRDSHDAAVKNIARHFGMVTESNEVIRLWHRAK"
     gene            complement(3376..3609)
                     /locus_tag="VLM90_11785"
     CDS             complement(3376..3609)
                     /locus_tag="VLM90_11785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13698.1"
                     /translation="MIICIASLGSAAAVHAQLRKINIAYTATSPYQAVLIVAKEVGLF
                     KKHNLDPTLVFTTGGSLGIQAMLGADGVDYSID"
     gene            complement(3706..4482)
                     /locus_tag="VLM90_11790"
     CDS             complement(3706..4482)
                     /locus_tag="VLM90_11790"
                     /inference="COORDINATES: protein motif:HMM:NF004868.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citryl-CoA lyase"
                     /protein_id="HSQ13699.1"
                     /translation="MADTPKLVSSMGRAELDKIYVRNYDLNKDLLGKISFAQMVCLML
                     EGRLPTAEEGRMIDTMLIVLVDHGMTTGAAAARMTFHSAPESIQGAVAAAILGAGSVH
                     LGSSEHCAKMLHDALSKEAKDTDLDAVALKTVEKRLANNQLIPGIGHGIHTGGDPRAQ
                     RLFEVAEETKVYGRNCELLKKIGKIADQKVGKHLPVNVTGAIAAISLDMGFHWQMSKS
                     FAILGRALGGLAHVGEEIRRPIARGISNLIRDNLQYEPEK"
     gene            complement(4559..5659)
                     /locus_tag="VLM90_11795"
     CDS             complement(4559..5659)
                     /locus_tag="VLM90_11795"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13700.1"
                     /translation="MSDNNIRIIDIDGHVREADDLFEKYLETPFRARAPKVEKVANGQ
                     LLFKLEGERHHRRPDESPFRVKDDGSPVNEGRHLATNPKQRLEAMDRDRIERGLMFPS
                     AGLYLTSVEEEAYAAALCRAYNNWLYDYCGEDRKRLMGVAAVPVQNVNLAIAEAKRAV
                     KELGFKGIFVRPNPVKGRNIDDPYYDPLYKTVVDLGVPLLLHEGSGAFLPTAGADRFT
                     GQWFFTHTISHPLEQMLASLGMICSGTLERHPELQCVFLESGAGWLPYWLWRMDEHYE
                     VLPFQVPWLKMKPSDYFRRQCFISFEADETRLGQVIESIGADHVVFASDYPHWDATFP
                     GVTDMIMNRKDLDAGTQRKIMGETAARLLRLD"
BASE COUNT         1215 a         1764 c         1624 g         1268 t
ORIGIN      
        1 gcgttcgacc aactctttcg ccgtgtaggc accaatcaaa ccacaaccgg taattaacac
       61 tcgcatggct atcccctttc gaaatctggg aagggcgacc gccggtcgcc cctacattga
      121 accgcgtctt gtccgaaacg atttgaacgg cttgaacatt ttgaactcag atattcaatt
      181 ccttcgaccg atcatactca tgccgcccgc ccgcagccgc gcccagcggg aagatccgat
      241 cgatctctgc caactcttcc gccgtcaacg aagtgtccgc tgccgccgca ttagcttcaa
      301 gattggcgat cttatacgtg ccgggaatcg gcacgaggaa atcgccctga tgaagaatcc
      361 atgccagcgc caactgcgcc accgtgcatt tcgtcacgct cgccatcgct tccagttgtt
      421 tgagcagact cgcattgtgt tgaaaattcc cggcgtggaa gcgcggcccg cgctgcttgg
      481 cttccttctc accgagctcg gcgaagtcgt tccacttacc gcttaagaat cctcgtccca
      541 aagcatagta agcgacataa ccgatgccca attcgcggca aaccggaatg gtgttgcttt
      601 cgtaatcgcg cgtccacagg gaatattcgc tctgcaccgc cgtgatcgga tgcaccgcgt
      661 tggcgcgccg cagggtctcg ggcccggcct cgctcaagcc gagctggcgc actttgcctt
      721 gctccaccaa ccgcttcatc gcgccgacgg tttcttcgat cggcactttg gggtcgacgc
      781 gatgaagata gtagagatcg atgtagtcgg tttgcagccg gcgcaacgaa ttgtcgcacg
      841 cccacgccac atactccggc ttgccttcga cttctctgcc ttccgcccaa ggctggccgc
      901 gcagattgcc aaatttcgaa gtcagcacga catcgccgcg ccggcccttc aacaccttgg
      961 cgaggatctc ttcattgttg ccgttgttgt gatcggcggt gtcaatgaag ttcatgccga
     1021 tttcgatggc gcgatcgagc acggcgatcg cctggcgctc gtcggcgtcg ctcagcttgc
     1081 cttgaaacgg cggacagccg taaccgatgg cggaaacttt caaacgattt ttgccgagat
     1141 aacggtattg catgtgagag aacctccgag ccgagataat ggtccacacg gatgtgaaaa
     1201 ttcaagttgc aacaacgcga ttttctgcta tctatcgcgc agcgctgtat cccactcggc
     1261 gccaggggag gccggatgaa gaacaaatca ttactgtgct cattgctgtt gtcgttcgga
     1321 ctttcgttta ccgcccaagc caaggcacaa gaatctttct tcaaaggtaa aaccatccgc
     1381 gtcgtcgttg gcggctccgc tggcggcggc tacgacacct acacccgggt gatctcccgc
     1441 catatgggca aacatatccc cggcaatccg acgttcgtcg tcgacaacat gcccggcgcc
     1501 ggcagcatca tcgcggccaa ccatgtttac aaggtttccc gccccgacgg cctcaccatg
     1561 tgccatccgg tcggcggtat cattttgcag aatgtattgg gcaaagccgg tatcgagttc
     1621 gactcgcgga agtttcacta cgtcggcgcg ccggcccaag acactctgtc ggttggcgtg
     1681 gtcaaatcag ccggcatcgc cagcatggag cagtggatcg ccaacaagac gccggtcaag
     1741 ttcggcggca tcggccccgg caccggcacc gacgatgtcg ccaaagtgtt gcgttacgca
     1801 ctcggcctgc cgattcaatt ggtcaccggt tacaaaggca ccgcagacat ccggctggcc
     1861 gtgcaaagcg gcgagatgca gggggtagtg aattcctggg agtcgttcaa atcgacctgg
     1921 tccaaagaga tcgagaccgg atcggtgaac gtcctcctcg tcaccatccc caagcgccat
     1981 cccgaactcc ccaacgtgcc gtccatcagt gagtatgtga aggctgacga agcaaagaag
     2041 atcgtccagg tcgcggtcta cgattacggc gccaccgcgc ggccatactt gctgccgcct
     2101 aacactccga aagagcgcgt acaaatcctg cgcaaggcct tggccgcgac gttcaaggat
     2161 cccgatttct tagccgacgc ccagcgcgcc cgcctggatc tgaacccgct tagcggcgac
     2221 gagatgcagg aggctgtcga gcgtttgtgg aaactcgaca aaccgttggt ggagaagctg
     2281 aaggagatac tgaaataaat cgtcagtccg gttacctcca tgtccgatgg cttcttgaaa
     2341 tcgctcaccg acaaaatcgc cccggctcac accgccctgc tggtcgtcga cgtccagaat
     2401 gatttttgcc acgaagacgg ctacgtcgcc aagcaaggtc tgagcgtcgc gcccgcccag
     2461 gcgatcgttg ccaatctcac tcgtctgatc gccgccgcgc gcgaaacgaa cgtcccggtg
     2521 atcttcgtgc aagcgattta cgacgacaag tatctcgccg gaccattcct tgagcacttc
     2581 agcaaggccc gcgtggcgct ggcccgctgc gccgaaggca cttggggcgc cgatttttac
     2641 ggcgtcaagc cgctagcaag tgacctgaga atcgtcaagt accgttacag cccgttcgtc
     2701 ggcaccgaca tcgacgcgct attgaaggca cgcagcgtca agacactggt catcaccggc
     2761 gtcaccacca acgtctgcgt tgagtgcacc gcccgcgacg gcttcatgcg cgactactac
     2821 atcgtcctgc cgtcggactg tgccgccagc tacgaccgcg actcccacga cgccgcggtg
     2881 aaaaacatcg cccgccactt cggcatggta acagagtcga atgaggttat tcgtctgtgg
     2941 caccgagcaa aatgatcggt ggcaatctta cccccctcgc ccattcccca cccctcatcc
     3001 taaccttctc ccacaagggg agaaggaacg aaaatctcga ttttgaattt ggcgccttct
     3061 cttttgattg ggacatgctt tgagagataa cccgtttccc cgggagagcc acgacgaatc
     3121 acattgcgcc gaactgcgaa agtttgttaa tactcgcacg agactcttga tattgaactc
     3181 tgcgggagta acaaccccat gccccaagat aacgaacatc gcggccgcgt cgccgtcatc
     3241 accggaggca gcggcggtat cggtggcgcg gtcgcgacac gtttaactgc cgaaggcgcc
     3301 accgtccata ttctggatgt aaaatcaggc gctgacaatt tgcgctttca tgccgtcgat
     3361 gtcggcgacg aagcttcagt caatcgaata atcgacgcca tcggcgccga gcatggcctg
     3421 gatgcccagg gatccgccgg tggtgaagac caaggtcgga tcgaggttgt gcttcttgaa
     3481 caagccgact tccttggcga cgatcaacac cgcttgatac gggctagtcg ccgtgtaagc
     3541 gatgttgatc ttgcgcagct gggcgtggac agcggctgcc gacccgagac tggcaataca
     3601 tatgatcatg accgcaatcg ttcgacgcaa cgctgttatc ctcattcttc ccatcactcc
     3661 cttactccga cactccagag ccgcgtttgc gccttcgaag aatcttcact tctccggttc
     3721 atactgcaaa ttatcccgaa tcagattcga tatgccgcgg gcgatcggcc ggcggatttc
     3781 ttcgccgaca tgggcgaggc cgcccaaagc gcggccgagg atcgcgaagc tcttcgacat
     3841 ctgccagtga aatcccatgt cgagggagat cgccgcgatg gcgccggtga cattcaccgg
     3901 cagatgtttg ccgactttct ggtcggcgat cttgccgatc ttcttcaaca gctcgcagtt
     3961 gcggccatac accttggtct cctcggcgac ttcgaacaag cgttgggcgc gcggatcgcc
     4021 gccggtgtgg atgccatggc cgatgccggg aatgagttga ttgttggcca gccgtttctc
     4081 gaccgttttt aacgccacgg cgtcgagatc ggtgtctttg gcttccttgg acaaggcgtc
     4141 gtggagcatt ttcgcgcagt gctccgacga accgagatga acgctgccgg cgccaaggat
     4201 cgccgccgcc accgcgccct ggatcgattc cggcgcggaa tgaaaagtca tgcgcgccgc
     4261 cgccgcgccg gtggtcatgc cgtgatcgac cagcacgatc agcatggtgt cgatcatccg
     4321 gccttcttcg gcagtgggca gccggccttc gagcatcaag caaaccatct gggcgaagct
     4381 gatcttgccg agcaaatctt tattcagatc gtaattgcgc acatagatct tatcgagctc
     4441 ggcgcggccc attgaagaaa ctagttttgg tgtgtctgcc ataaaacctc cttaaattgt
     4501 atttcgtcgc gaaggggaaa ggcaactttt tccgcgaaaa aaatagccag tccgttactc
     4561 aatccaacct taatagtctt gccgcggtct cccccatgat cttgcgctgg gtgccggcgt
     4621 ccaaatcctt gcgattcata atcatgtcgg tgacgccggg gaaggttgcg tcccaatggg
     4681 gatagtccga ggcgaatacg acatggtcgg cgccgatgga ttcgatcacc tggcccaagc
     4741 gggtttcgtc ggcctcgaag gagatgaaac actggcggcg aaagtagtcg ctcggtttca
     4801 tttttagcca tgggacttgg aacggcagga cttcgtagtg ctcgtccatg cgccagagcc
     4861 aatagggcag ccagccggcg ccggattcga gaaatacaca ctgcaattcg ggatgccgct
     4921 ccagtgtgcc gctgcagatc atgcccaggc tggcgagcat ctgctccagc ggatgggaga
     4981 tcgtgtgagt gaaaaaccac tggccggtga agcggtcggc gccggcggtg ggcaggaacg
     5041 cgcccgaacc ttcgtggagc aatagcggca cgccgagatc gacgacggtc ttgtacagcg
     5101 ggtcgtagta aggatcgtcg atgttgcggc ctttgaccgg attgggtctg acgaagatgc
     5161 ccttgaagcc tagttcttta accgcgcgct tggcttccgc gatcgccaga ttgacattct
     5221 gcaccggcac cgcggccacg cccatcaagc gtttgcggtc ctcgccgcag tagtcataga
     5281 gccaattgtt ataagcgcgg cagagcgcgg cggcataggc ttcttcttcg accgacgtta
     5341 agtacaaacc ggcggaggga aacattaggc cgcgctcgat gcggtcgcgg tccatcgctt
     5401 ccaggcgctg tttgggattg gtcgcgaggt ggcgtccttc gtttaccggc gaaccgtcgt
     5461 ctttgacgcg gaacggcgat tcgtccgggc ggcggtgatg gcgctcgcct tcgagcttga
     5521 ataagagttg gccgttggcg actttttcga ccttcggcgc gcgggcacgg aaaggcgttt
     5581 ctaagtattt ttcgaataaa tcatcggcct cgcgcacatg gccgtcgatg tcgatgatgc
     5641 ggatattgtt gtcactcatt ttttttctgg ttctttcggg ttcattgtga cgatgttttc
     5701 accaagacgg acacgaagat cacgaagttc ggaatcttga tcatccgaac ccttcgtgtc
     5761 cttcgtgctc ttcgtggtga gcaaaacaac ttgaacttga cacattatcc acaccacagt
     5821 ctgtagactc tattctatct ccgttcacgc agaccttctt cgaccagcga g
//
LOCUS       DATIRS010000934         2042 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_266589, whole genome shotgun sequence.
ACCESSION   DATIRS010000934 DATIRS010000000
VERSION     DATIRS010000934.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_266589"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..428)
                     /locus_tag="VLM90_11800"
     CDS             complement(<1..428)
                     /locus_tag="VLM90_11800"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13701.1"
                     /translation="MIRSSITLHICLWFFLSFSAWAPSAAAQNKITFAYSSVGAMATG
                     VWMAKESGAFEKNGIQADLIFISSGPVVVQALIGGDLHGGSAATNAVVNAILSGAPII
                     GVAGTANRPYHRLYVQPEINRVEDLKGKTLGVTRFGSITD"
     gene            complement(630..1712)
                     /locus_tag="VLM90_11805"
     CDS             complement(630..1712)
                     /locus_tag="VLM90_11805"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ13702.1"
                     /translation="MEKLVHRLVTNWLLFFVVTSWLFGAALHGAEANVESLLAEINRK
                     PAEQRLKALMEGAKKEGVIHHYGSINAPDNDELTKGFAKQYPFIEVRYTRLGAEQVVN
                     RAVTEYRSGVPSADVISLRGTFMPELLDKKIIARYKSPMAAFLRPGFTDPDGFMATNF
                     ATGYAMIFNTARVKPGEAPKSYEDLLQPRWKGRLVLDQDAHDWFAGMIDLMGENKAAA
                     FLRRLVTEQGLKLKRNHSLITQLTAAGEHDLFIDGYIHNAVEFKSKGAPVDYVFTNPT
                     IVKPPSVIAITSKSARPHAAALLLDYYLSKPAHEIMAHKQARWTTRADVKWLTEPGTE
                     VHVVSPLKWGRRYNDVVELFRKTTAP"
     gene            complement(1747..>2042)
                     /locus_tag="VLM90_11810"
     CDS             complement(1747..>2042)
                     /locus_tag="VLM90_11810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13703.1"
                     /translation="EGGQIVNSSLVDYKVPTFDDVPDEFESILIEDGNGPGPYGAKGL
                     GEGGIIPVAPAVANAVFWSTGARVKTLPLTPEKVWRAIKEAKGVIQDGETKSL"
BASE COUNT          403 a          613 c          563 g          463 t
ORIGIN      
        1 ttgtcggtga tcgaaccgaa gcgggtgacg ccgagggttt tgcccttgag atcctcgacg
       61 cggttgattt ccggttggac gtacaaacga tgataagggc ggttggccgt gccggccacg
      121 ccgatgatcg gcgcgccgct caagatcgcg ttgacgacgg cattggtcgc cgcgctgccg
      181 ccatgcagat cgccgccaat caatgcctgc acgaccaccg ggccggaaga tatgaaaatc
      241 aaatccgcct ggatgccatt tttttcgaaa gcgccgcttt ccttggccat ccaaacgccg
      301 gtcgccatcg cgcccaccga cgaataagcg aaggtgattt tgttctgcgc cgcggcgctc
      361 ggcgcccaag ccgaaaagga taaaaagaac cacaggcaaa tgtgcagcgt gatcgatgat
      421 cggatcatgt cggctccatt ggttttgatt taaacgcttt cactgcgctt tggacaagct
      481 atcgaaaaag ccctcgcgtg ccagcttgtc ggcgatggaa ttgttctggc aggtttccac
      541 ctgagaaagt ccagcgctcc ggctgaccag gatgaggcgc gacagttgaa gcgaattttg
      601 cgaactgttg ataatccctc tcgccacttc tacggcgcgg tggtttttct gaacaactcc
      661 accacatcgt tgtagcggcg gccccatttg agcggcgaaa cgacatgaac ctcggttcct
      721 ggttccgtca gccacttgac gtcggcgcgg gttgtccagc gcgcctgctt gtgcgccatg
      781 atctcatgag ccggtttcga caggtaatag tcgagcagca aagccgcagc gtgaggacgc
      841 gcgctcttcg acgtgatcgc aatcaccgaa ggaggcttca cgatggtcgg attggtgaag
      901 acataatcga ccggcgcgcc tttgcttttg aattccacag cgttgtgaat ataaccgtcg
      961 ataaacagat cgtgctcgcc ggccgcggtc aactgcgtga tcagagaatg gtttcttttg
     1021 agcttcaaac cctgttcggt cacgagcctt cttaagaaag ccgcggcctt gttctccccc
     1081 atgagatcga tcatgccggc gaaccagtca tgggcgtctt gatccagcac caatcttccc
     1141 ttccagcgcg gctgtagtaa gtcttcgtac gacttgggcg cctcaccggg cttcaccctt
     1201 gcggtgttaa agatcattgc gtagccggtc gcgaagttag tcgccatgaa accgtcgggg
     1261 tcggtgaagc ccggtcgcag aaaagccgcc atcgggcttt tgtatcgagc gatgattttc
     1321 ttatccagga gctcaggcat gaacgttcca cgcagggaaa tcacgtcggc gctggggacg
     1381 cccgagcggt attccgtcac cgcgcggttg acgacctgct cggctcccaa cctggtatag
     1441 cgcacctcga tgaacggata ctgtttggcg aatcctttcg tgagctcgtc attgtcgggg
     1501 gcattgatcg agccgtagtg atgaatcacc ccttctttct ttgccccttc catgagcgcc
     1561 ttcagccgct gctccgccgg cttgcggttg atctccgcca acaggctctc cacgttcgct
     1621 tcagcgccat gaagcgccgc gccgaagagc cagcttgtta cgacaaaaaa cagcaaccag
     1681 tttgtcacca agcgatgcac cagcttttcc attctgccat gccctacgcg agcaatcagc
     1741 attagtttac aagctcttcg tttccccatc ctggattacg cctttcgcct ctttgatcgc
     1801 gcgccagact ttttccggcg tcagcggcag ggtcttcacc cgcgccccgg tgctccaaaa
     1861 gaccgcgttg gccaccgccg gcgcgaccgg aatgatgccg ccctcgccca gtcctttggc
     1921 gccgtagggt ccgggcccgt tgccgtcttc tatgagaatc gattcaaact catccggtac
     1981 gtcgtcgaag gtcggcacct tgtagtcgac cagggaggaa ttgacgatct gaccgccttc
     2041 cc
//
LOCUS       DATIRS010000935         2537 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_167711, whole genome shotgun sequence.
ACCESSION   DATIRS010000935 DATIRS010000000
VERSION     DATIRS010000935.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2537
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167711"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..193
                     /locus_tag="VLM90_11815"
     CDS             <1..193
                     /locus_tag="VLM90_11815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13704.1"
                     /translation="PDIKFNRQIGDYADKMFSIEGNPLSEAEYKKHLEAVLPGPAERK
                     LLEPILKAGNWMSAGAANA"
     gene            280..1326
                     /locus_tag="VLM90_11820"
     CDS             280..1326
                     /locus_tag="VLM90_11820"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSQ13705.1"
                     /translation="MPPTAATTDARRELDKALDGKWLSGLWNVSNEERTGEPKTKVTP
                     HLWKWADVYDSLQRARDIIDIGGGTTERRYIRLVNPGLGDRKLTAHTMLFGFQLIQPG
                     EVAPAHRHTMTAFRFVIQGKGAFTNVDGEKMPMQPGDLIRTPQWTWHEHENRGSEAMI
                     WADGLDVPLIETLQVVSVERRHEERLRVKEGQIHPSLYGMMRPAGRAAQPLVAPLHYR
                     WSDSYAALQRLAESVADPYDGVALDYVDPLTGGPTFPTLLCRLQMFRPGEQTQSHRHR
                     STSIYHVFRGSGTTEIDGKALAWEQGDSFVVPLWSWHSHANGSSQDEAILFSLHDEPV
                     LRAFGLYLEEGAAS"
     gene            1377..2468
                     /locus_tag="VLM90_11825"
     CDS             1377..2468
                     /locus_tag="VLM90_11825"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSQ13706.1"
                     /translation="MTQTAQNLGHRLDDFYRDAQANHLAPLWPVTAQLLTAEPKTKVK
                     PFLWRGSELRRLMLEAGELVPLERGGERRVLALINPGLTGKYAATHTLWGAVQIVMPG
                     EVAPCHRHSASAIRFIIEGERSYTTINGDKCMMSRGDLVLTPNWTWHDHGCESDQPII
                     WMDGLDLPLVGDLDAVFFEAPAELLQAAASTNASEIKYGGPHLQPSWEQPAEGQATLL
                     NYKWNPTYEALKRIGVAPASPYDDVCFEYRNPNSGGPVLPTMSCHIQMIRAGVHTQAH
                     RQVNSAVYHVFAGKGFSVIDGQRFDWQRGDFFVVPPWAWHEHANDSGTEALLFSVQDT
                     PVMKALGLYRERPYEQNGGRQTITSIFAP"
BASE COUNT          562 a          787 c          738 g          450 t
ORIGIN      
        1 gccggatata aagtttaacc ggcagatcgg cgactacgcc gacaagatgt tcagcatcga
       61 aggtaatccg ttgtccgagg ccgagtacaa gaaacatctc gaagcggtgt tgccgggtcc
      121 ggccgagcgc aaattgttgg aaccgatcct caaagctggc aactggatgt cggccggcgc
      181 ggcgaacgcg taaccgcctg gtcatgagtt tcacggtggc gcgagcgcca tcgtgaggcc
      241 agaggtatga atttacctgc gagtattacg gagcccgcta tgcctccaac tgccgcaacg
      301 accgacgcgc gccgggaact cgacaaagcg ctggatggca aatggctatc cggcctatgg
      361 aacgtcagca acgaggagcg cactggcgag cccaaaacca aagtcacgcc tcatctatgg
      421 aaatgggccg atgtctacga ctcactgcag cgggcccgcg atatcatcga catcggcggc
      481 gggaccacgg aacggcgcta catccgcttg gtcaatcccg gtctcggcga tcgcaagtta
      541 accgcgcaca ccatgctctt cggctttcaa ctgattcaac cgggcgaagt cgcgccggcc
      601 catcgtcata ccatgaccgc cttccgcttt gtcatccagg gcaaaggcgc gttcaccaat
      661 gtcgacggcg agaagatgcc catgcagccg ggcgatctga tccgcacgcc gcagtggacc
      721 tggcacgagc atgagaaccg aggcagcgaa gcgatgatct gggccgatgg gctcgatgtg
      781 ccgctgatcg aaactctaca agtcgtgtcg gtcgaacggc gccatgagga acggctgcgg
      841 gtcaaagaag ggcaaatcca tccgtcgctt tacggcatga tgcgtccggc cggccgagcc
      901 gcgcaaccat tagttgcgcc gctgcactat cgttggtctg acagctacgc ggcgctgcag
      961 cggctcgccg agagcgtcgc cgatccctac gacggcgtcg ctttggacta tgtcgatcct
     1021 ttgaccggcg gcccgacctt cccgacgctg ctctgccgcc tgcaaatgtt ccgtcccggc
     1081 gagcagaccc aaagccatcg ccatcgcagc accagcatct accatgtctt tcgcggcagc
     1141 ggcacgactg agatcgacgg caaagcattg gcatgggagc aaggcgacag cttcgtcgtg
     1201 ccgctgtgga gttggcacag ccacgccaac gggtcgtcgc aggacgaagc gatcttattc
     1261 tcacttcacg acgagccggt cttgcgcgcc tttggacttt atctcgaaga aggcgccgct
     1321 agctgaaatg ccatgaagtc accgcaaccc tccgcttcaa gacgaggacc aacgtcatga
     1381 ctcaaaccgc gcaaaatctc ggtcaccggc ttgacgattt ttatcgcgac gcgcaagcca
     1441 atcatttagc gcccttgtgg ccggtcactg cgcaactcct gacagcggag ccgaaaacaa
     1501 aagtgaaacc gtttctatgg cgcggctctg agctgcgccg cttgatgctc gaagccggag
     1561 agttggtgcc gctcgaacgc ggcggcgagc gcagagtgtt ggcactgatc aatcccgggc
     1621 tcactggcaa atacgcggcg acccacacgc tgtggggtgc cgtccaaatc gtcatgccgg
     1681 gagaggtcgc gccctgccat cgccacagcg cgtcggcaat ccgcttcatc atcgagggcg
     1741 aacgcagcta caccacgatc aacggcgaca aatgcatgat gagccgcggc gatttggtac
     1801 tcacgccgaa ttggacctgg catgatcacg gctgcgaatc ggaccaaccg atcatctgga
     1861 tggacggatt ggatttgcca ctggtcggcg atctcgacgc ggtatttttc gaagcgccag
     1921 ccgagctgct ccaggcggcg gcgtcgacca acgcctcgga aattaaatat ggcgggcccc
     1981 atctccagcc gtcctgggaa cagccggccg aaggccaagc cacgctactc aactataaat
     2041 ggaaccctac ctacgaagcc ttgaagcgca tcggcgtggc gccggcgagc ccctacgacg
     2101 acgtctgttt cgaatatcgc aatcccaaca gcggcggccc ggtgctgccg acgatgagct
     2161 gtcacatcca gatgattcgc gccggcgttc atacccaagc ccatcgccag gtcaacagcg
     2221 ccgtctatca tgttttcgca ggcaaaggtt tttcggtgat cgacggccag cgcttcgatt
     2281 ggcagcgcgg cgacttcttc gtcgtgccgc cttgggcttg gcacgagcat gcgaacgaca
     2341 gcggaacaga agcgctgtta ttttccgtgc aggatacgcc ggtgatgaaa gccctcggcc
     2401 tctatcgcga acgaccctac gaacagaacg gcgggcgcca aaccatcaca agcatttttg
     2461 ccccgtaaca atgatcgccg cgaaaaaaaa gccacgagat agcttagcgc agcagagccg
     2521 caaccaaatg ggaaaga
//
LOCUS       DATIRS010000936         3860 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_167784, whole genome shotgun sequence.
ACCESSION   DATIRS010000936 DATIRS010000000
VERSION     DATIRS010000936.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3860)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3860)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3860
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167784"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1165
                     /locus_tag="VLM90_11830"
     CDS             <1..1165
                     /locus_tag="VLM90_11830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13707.1"
                     /translation="RSSLVNPRLEASVEVANYSERDEKINILLKGNGAELAHREIVVG
                     TGKSAAVSFEGITDHPSYEAEIANRDALPVDNRRFAVAPASRNLRILGITPRPRELES
                     LKAIPGVRIDIVAPADYDKVERAGYGLEIYHFATPAALPPTAALFILPPESSSLVDLG
                     APVSNVTVSNWRDPHVLTRYVNFNLFRPAYARPLKPQTAGDIVIDSAVGPLAFASERQ
                     GVRYLTVGFDPFPYLGRDNLPMSVFTLNLLDWFFDSRSGKSQSTGEPIYLGKAQHGDQ
                     ILLPGGKSLAITPGAGFFGGAFYQGIYQLNRGGERQLIARNLLDRGESDLRTPAPVAI
                     GGGSPLGASASVLFSFWPYLLIASLALLLLEWFLSPRMALAKPLRAPARVAQR"
     gene            1165..3708
                     /locus_tag="VLM90_11835"
     CDS             1165..3708
                     /locus_tag="VLM90_11835"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HSQ13708.1"
                     /translation="MKNLLANIEFARPYLLWLLVFLPVLWLRLGDRRLWVLLARTAIM
                     ALVILTLADPQTTSQQSSQEERIFAYDVSRSVPPSMRPWMASMTEQLAPGKSDRIYTF
                     AGAAMESADLQEALSGATSANQSDKTNLESLLTTLLALPAAPRSVFFFTDGWETDGNV
                     ERLLSAAAAAGIRIYPMLPVERPAIANVAVTRVIAPSQGMSGESLNLRVSLDNQNDRP
                     VDGVLTLTRNGQPFKTDRIKLRPGSQSLSYQANLTGEALTAYRANFAAVDAAADIFTP
                     DNHALAWVNVRTKAKVLIVNGAGGSGRYLDEIARRQGFDVVSSGAEGAPPPAGHKVVI
                     FNNVPRERFSAAYLASVERHVAGGGSFIMLGADASFAQNSFRQTPIEKILPVEPKEPP
                     KQPEKNRAIVLVIDKSGSMRDDNRILFAKEAAKAVARQLKDIDLLGVVGFDDSPFVVV
                     YLESMARLRGVIDSQIDRLRPGGQTYFLPALQEARRQLERSNASRKHVILLSDGVTRG
                     SQGELVDLVGAMKTDSKITVSAVAISNEADIRVMKRVAQYGGGLFHHTVDPSTLPQIV
                     LEQLQDKPRDEPKDNRPLIPVLAGGSELLAGFGVRNYPAVLGYMDTEVKRGAQADLII
                     PRDDRRPPLLASWRYGKGKSVAFTSDLEGRWTRNWVPWDGLQGLWGRILEWLSPSEQN
                     LIPLHETRVSFTGGQSILDLTVYEESGANSQFRFSLAGKNGKTEGTLNKLAPGHFQVV
                     LPASTSGDYRIDLTEERGGQRIAYPPVAYTLAYDRSAEVPRPEFNYRLLARLAEGSGG
                     EINPRSLDSLRRESLTKNFQPVRQPLLILAFILLLVEIALRRIVFRESD"
BASE COUNT          790 a         1199 c         1103 g          768 t
ORIGIN      
        1 gcgctcgtcg ctggtcaacc cccgcttgga agcgtcggtc gaagtcgcca actattccga
       61 gcgcgacgag aaaatcaaca tacttctaaa aggcaacggc gccgaattgg cgcaccgtga
      121 gatcgtcgtc ggcaccggca agagcgcggc agtttccttc gagggtatta ccgaccatcc
      181 cagctacgaa gccgagatcg ccaaccgcga cgctttgccc gtcgacaacc ggcgtttcgc
      241 cgtggcgccg gcatcgcgca acctgcgcat actgggaatt accccgcggc cacgcgagct
      301 ggaaagttta aaagcgatcc ccggcgtgcg gatcgatatc gtcgcgcccg ccgactatga
      361 caaagtcgag cgcgccggct acggcttgga gatttatcat ttcgccaccc cggcggcgct
      421 gccgcccacc gcggcgctgt tcattctgcc gccggaaagc agctccttgg tcgatctcgg
      481 agcgccggtg agcaacgtca ccgtgtccaa ctggcgcgat ccccatgtgc tgacccggta
      541 cgtcaatttc aacctattcc ggccggccta cgcccgtccg ctcaagccgc aaactgccgg
      601 tgatattgtt attgacagcg ccgttggccc actggcattc gccagcgaac gacaaggggt
      661 gcgctacctc accgtcggtt tcgatccgtt tccgtacttg gggcgcgaca acttgccgat
      721 gtcggtgttc accttgaatc tgctcgactg gttttttgac agccgcagcg gcaaaagcca
      781 aagcaccggc gagccaatct atctcggcaa ggctcaacac ggcgatcaaa tcctcctgcc
      841 gggcggcaaa agcctggcga taactccagg ggccggattt tttggcggcg ccttctacca
      901 gggtatctat caattgaacc gcggcggcga gcgccagcta atcgcccgta atttgctcga
      961 tcgcggcgag tccgacctga ggacgccggc gcccgtcgcc atcggcggtg gcagcccgct
     1021 cggcgccagc gcgtcggtgc tgttttcctt ttggccgtat ctattgatcg cgtcgttagc
     1081 gctgctcttg ctcgaatggt tcttaagccc gcgcatggcg ttggccaaac ccttgcgcgc
     1141 tccggcgcgg gtggcacaac ggtgatgaaa aatctcctcg ccaatatcga gttcgcccgg
     1201 ccctatcttc tctggctctt ggtttttcta ccggtgctct ggctgcgctt gggcgaccgg
     1261 cgcttgtggg tcttgctggc gcgcacggcg atcatggcgc tggtgattct tacccttgcc
     1321 gatccgcaga ccacgagtca gcaatcaagc caggaagaac ggatcttcgc ttacgatgtc
     1381 tcgcgcagcg tgccgccgag catgcgccca tggatggcaa gcatgaccga gcaactagcg
     1441 cctggtaaga gcgaccgcat ctatactttc gccggcgctg ctatggagag cgccgatctg
     1501 caagaggctc tcagcggcgc caccagcgcc aaccaatcgg acaagaccaa tttggagagt
     1561 cttttaacta cgctccttgc cctgccggcg gcgccgcgct cggtcttttt cttcacggat
     1621 ggctgggaaa ccgatggcaa cgtcgagagg ctgctgtcgg cagcggctgc cgccggcatt
     1681 agaatttatc caatgctgcc tgtcgaacgg ccggccatcg ccaatgtcgc cgtgacccga
     1741 gtgatcgcgc ccagccaggg catgagcggc gaatcgctca atttaagagt cagtttggat
     1801 aaccagaatg accgtccggt cgacggcgtg ttgacgctca ccagaaacgg tcaaccgttc
     1861 aaaaccgacc ggattaagct gcggccggga agccagagtc taagttatca agccaatctc
     1921 accggcgagg cgctcaccgc ctatcgagcg aacttcgccg ctgtcgatgc ggctgccgat
     1981 attttcacgc cggataatca cgcgcttgcc tgggtcaacg tgcggacaaa agcgaaagtc
     2041 ctgatcgtta acggtgccgg cggctcgggc cgctacttgg acgagatcgc ccgccgccag
     2101 ggctttgacg tagtttctag tggtgccgaa ggtgcgccgc caccggcagg gcacaaagtc
     2161 gtgatattta ataacgtgcc ccgggagcgc ttttccgcgg cttacctcgc cagcgtcgag
     2221 cgccatgtcg ccggcggcgg ctctttcatc atgctcggcg ccgacgccag tttcgcccag
     2281 aacagctttc gccaaacccc aattgaaaaa atcctgccgg tagagccgaa ggagccaccc
     2341 aaacagccgg aaaaaaaccg cgccatcgtg ttggtcatag acaagtcggg cagcatgcgt
     2401 gacgacaatc gaattctatt cgccaaggaa gccgccaaag cggtggcgcg ccagctcaaa
     2461 gacatcgatc tattgggtgt cgtcggtttc gacgacagtc cgtttgtcgt cgtctacttg
     2521 gaatccatgg ctcggttacg cggggttatc gacagccaaa tcgaccggct caggcccggt
     2581 ggacaaactt acttcctgcc ggcattacag gaagctagac gccagcttga gcgatccaat
     2641 gcctcacgca agcatgtcat cctgcttagc gacggcgtca ctcgcggtag ccagggcgaa
     2701 ctggtcgatc tggtcggcgc gatgaaaacc gatagcaaaa tcaccgtctc cgccgtggcg
     2761 atcagtaatg aggcggatat cagagtcatg aagcgggtgg cgcaatacgg cggcggcctg
     2821 ttccatcaca ccgtcgatcc atcgactctg ccacagatcg ttcttgaaca gctccaagac
     2881 aaacctcgcg acgagcccaa ggacaatcgc ccgctgattc cagtactggc cggcggctcg
     2941 gaactgttgg ccggtttcgg cgtgagaaat tatccggcgg tgctgggcta tatggacacc
     3001 gaagttaaaa ggggcgccca ggctgatcta atcattccgc gcgatgatcg gcggccacca
     3061 ctgctcgctt cttggcgcta cggcaaaggc aaatcggtcg ctttcaccag cgatctagag
     3121 ggacgctgga cgcgcaattg ggttccctgg gatggactac agggtctttg gggccggatc
     3181 ttagaatggc taagcccgag cgaacaaaac ctgatcccgt tgcacgaaac gcgggtcagc
     3241 ttcaccggtg ggcaatcgat cctcgacctg acggtctatg aagagagcgg cgccaatagc
     3301 caattccgct tttcactagc cggcaagaac ggcaagaccg aaggcacgct aaacaaactc
     3361 gcgcccggcc atttccaggt ggtcctgcca gccagcacca gcggcgatta ccgcatcgac
     3421 ctgaccgagg agcgaggcgg ccagcgcatc gcctacccgc cagtcgccta cacgttagct
     3481 tacgaccgca gcgccgaagt gccgcgaccg gaattcaact accggctcct cgcaagattg
     3541 gcggaaggca gcggcggcga aatcaacccc cgctcactag acagcctgcg gcgtgaaagt
     3601 ttgaccaaga acttccagcc ggtgcgccag ccgctgctga tcctggcttt catccttttg
     3661 ctcgtcgaga tcgccctgcg gcgcatcgtt tttagggaat ccgactaagc ccagattcgc
     3721 tcctaacacc gcgaattgtc cgaggtattg gacttttttt agcagcgatt ttaggttgac
     3781 agcccggctt taacagacta taagttgtaa tctttgttga ctatggcttg ccaaattaca
     3841 ccatccgggc agctccatta
//
LOCUS       DATIRS010000937         1525 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1840372, whole genome shotgun sequence.
ACCESSION   DATIRS010000937 DATIRS010000000
VERSION     DATIRS010000937.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1525
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1840372"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..588
                     /locus_tag="VLM90_11840"
     CDS             <1..588
                     /locus_tag="VLM90_11840"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HSQ13709.1"
                     /translation="EPDLVVVGGDLVTGHVSEAERILDCLIPLTRARLGAWYCMGNHD
                     YFGGDPEELRENLASIGIRTLRNDSTVIRHGAGSFVLGGIDDRIMGRPDWNHLLAKHG
                     PPDLLMAHNPDQFYEAEKVAIPLTLSGHTHGGQIRFRNGPAIIRQSRYCLDEGLYSFG
                     KSQLVVSRGLGSVFLPIRWSADAEAVMIEVLPPKR"
     gene            complement(693..>1525)
                     /locus_tag="VLM90_11845"
     CDS             complement(693..>1525)
                     /locus_tag="VLM90_11845"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13710.1"
                     /translation="KEGIAVDLVSIGRSDIQLQALVAGELHFANINADNIIIWNERTG
                     GNLKVAAGSSNAAPYLLIGAKNIKRIEDLKGQRIGVNSLSGGATSILVAYLRTKGLLH
                     PRDFSMSVIAGGTPARLSALESGAVAGAVLVLPFSDIAVDKGFTKLGDTTEVISSYQF
                     NNININPAWAEKNRPSVVKFIKAHIQALRWLHDHPADAAEFLTKEFGLQAVYARRGID
                     YYTKTKVYPYNGDVTLAGLKINIDVQVQDGIIKGAVPAPEKYIDLSYLRQAQKELGIQ
                     "
BASE COUNT          296 a          461 c          427 g          341 t
ORIGIN      
        1 gagcccgatc tcgtcgtcgt tggcggtgat ctcgtcaccg gccatgtcag cgaggccgag
       61 cggattcttg actgcttgat cccgttgacc cgggcgcgct taggggcatg gtactgtatg
      121 ggcaatcacg actacttcgg cggcgacccc gaggagctgc gcgagaatct cgcgtcaatc
      181 ggtatccgca cattgagaaa cgacagcaca gttatccgcc atggcgccgg cagtttcgtc
      241 ttgggcggca tcgatgaccg gatcatgggc cgccccgatt ggaatcacct gctcgcaaaa
      301 catggcccgc ccgatctgtt gatggcgcat aaccccgacc agttctacga ggcggaaaaa
      361 gttgccatac cgttgaccct ctccggccac acccatggcg gacaaatccg gttccgcaac
      421 ggcccggcga tcatccgcca aagccgctat tgcttagacg aagggctcta ttcgttcggc
      481 aaatctcaac tcgtcgtatc gcgcggcttg ggtagcgtgt tcctgccgat ccgctggagc
      541 gccgatgccg aggcggtcat gatcgaggtc ctcccgccga agcgatgacc gttatttaat
      601 cctgaaggat cgcgcgccgc acggcaactc catatttgac tgcggaattc agtttgacat
      661 gctgacggga gccacattct ctgttttgcc gcttactgaa tacccagctc cttctgcgcc
      721 tggcgcagat aactcagatc gatatatttt tccggcgccg gcacggcgcc cttgatgatg
      781 ccgtcttgca cttgcacgtc gatattgatc ttcaagccgg ccagcgtcac atcgccgttg
      841 taggggtaaa ctttggtctt ggtgtagtag tcgatgccgc ggcgggcata gaccgcttgc
      901 aacccgaact ccttggtcaa aaattcggcg gcgtccgccg gatgatcatg caaccagcgc
      961 agcgcttgaa tatgcgcctt gataaatttc accacgctcg ggcgattctt ctcggcccaa
     1021 gccggattta tattgatatt gttgaattgg tagctcgaaa tcacctcggt ggtatcgccc
     1081 agcttggtaa aacccttgtc gacggcgata tcggaaaacg gcaagaccaa cacggcgccc
     1141 gccaccgcgc cgctctcgag cgcgctcaag cgcgccggtg tcccaccggc gatcaccgac
     1201 atggaaaagt cgcgcggatg aagcagccct tttgttcgca agtaggctac cagaattgac
     1261 gttgcgccgc cgctcaggct gttcacgcca atccgttggc ctttgagatc ctcgatgcgc
     1321 ttgatgtttt tggcgccaat cagcagatac ggcgccgcat tgctcgaccc cgcggcgact
     1381 ttcaagttgc cgccggtgcg ctcgttccaa ataatgatgt tgtcggcgtt gatgttggcg
     1441 aagtgaagct caccggctac caaggcttgc agctgtatgt cgctgcggcc gatgctgacc
     1501 agatccaccg cgatgccttc tttgg
//
LOCUS       DATIRS010000938         2542 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1348801, whole genome shotgun sequence.
ACCESSION   DATIRS010000938 DATIRS010000000
VERSION     DATIRS010000938.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2542
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1348801"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            76..1299
                     /locus_tag="VLM90_11850"
     CDS             76..1299
                     /locus_tag="VLM90_11850"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSQ13711.1"
                     /translation="MYKTTKEENEILTRTGKGTPMGEFLRRYWWPIGISAHLKIKPTF
                     IRVFGEDLVLFRDGNGKAGVIGAYCAHRRANLCLGDVEKDGVRCRYHGWLYDRDGRCR
                     QIPGEPPNSELKKESIRLPAYPVEELGGLIFAYFGPQPAPLVPRYNFLVGDGEVYITI
                     QGIQNCNWLQCVENGMDPVHPSFTHGGAWPDIMSSEPELGFHETEWGMVYKAYRNTKE
                     PGLLNYREHHLLMPGVSCGGSGGRYLSGQNANTPVSAARWSVPIDDTHTLLMRVRFKP
                     SDNPGKYEGDPFSKRWKPPQQFIVPYKEYMDSDNPELGYPIPPLHFIEDGMVVDSMPP
                     IADRENENLGPAIDDGIIKLRQMYLREIDKVKRGEDPRCIVRDPAKNKMIIIPAYEKW
                     VPESERNLGMTATAG"
     gene            1484..1804
                     /locus_tag="VLM90_11855"
     CDS             1484..1804
                     /locus_tag="VLM90_11855"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSQ13712.1"
                     /translation="MAVHVVNENDVEQVKSGRGFTKWLHVSPGGSGPEMMIRHWGPDT
                     DIPVHSHPYHEMFYVLEGEIEVGGTTYSAGSCIYIEKDTPYGPTRAPKGGKVLRYAEA
                     GIGK"
     gene            1779..>2542
                     /locus_tag="VLM90_11860"
     CDS             1779..>2542
                     /locus_tag="VLM90_11860"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSQ13713.1"
                     /translation="MPKPVLANSVEAYIDADGLKTFYVKAGSGFPVVLFHGAAPGASA
                     QVNWQLNIEPLAAAGFTVYAYDQAGYGRSDNPADLSIEYRVTHAKAFVDALKLDRYHV
                     VGNSVGGYIAARLALEDSRVGRFVTTTSGTLAPKGSAQSQALGQKHSEELREYVPSLA
                     NMRALTLGTLHRKELVTEELVRARYEMSIGKNQAAAQARQGVKPPRSLTDELPRLKTK
                     TLLLWGNQDRGVSVERGLLLFQLIPNAEFHLFDQCA"
BASE COUNT          568 a          705 c          765 g          504 t
ORIGIN      
        1 cggagcgcct cgcattgagc aattattttt tgtgaacttt gtgctctttg gggttaaaaa
       61 tccggagaac attaaatgta caaaaccacc aaagaagaaa atgagatctt gacgcgcacc
      121 ggcaagggga cgccgatggg ggagtttttg cggcgctatt ggtggcccat tgggatctcc
      181 gcgcatttga aaattaagcc gacgttcatt cgcgtattcg gcgaagattt ggttctgttt
      241 cgcgacggca acggcaaagc cggcgtcatc ggcgcctact gcgcgcaccg gcgggcgaat
      301 ttatgtctcg gcgatgtcga gaaagacggc gtgcgctgcc gttatcacgg ctggttgtac
      361 gaccgcgacg gccggtgccg gcagattccc ggcgagccgc cgaacagcga gttgaaaaaa
      421 gagtcgatcc gcctgccggc ctatccggtc gaagaactcg gcggactgat cttcgcttac
      481 tttggaccgc agccggcgcc gctggtgccg cgctataatt tcctcgtcgg cgacggcgaa
      541 gtgtatatta cgatccaagg catacagaat tgcaattggc tgcagtgcgt cgagaatggc
      601 atggacccgg tgcatccgag tttcacccat ggcggcgctt ggccggatat catgagcagc
      661 gagccggagc tgggctttca cgaaaccgaa tggggcatgg tttacaaagc ctatcgcaat
      721 actaaagagc caggcctgct caactaccgc gagcatcact tgctcatgcc cggggtcagt
      781 tgtggcggca gcggcgggcg ctatttgtcc ggtcagaacg ccaatacgcc ggtgtcggcg
      841 gcgcgttgga gcgtgcccat tgacgacacc cacacgctgc tcatgcgcgt gcgcttcaag
      901 ccgtcggaca atcccggcaa gtatgaaggc gatccgttca gcaagcgttg gaagccgccg
      961 cagcagttca tcgttcccta taaagaatat atggattccg acaatcccga gctcggctat
     1021 ccgatcccgc cgctccattt catcgaggac ggcatggtgg tcgacagcat gccgccgatc
     1081 gccgaccgcg aaaatgaaaa tctcggcccg gcgatcgacg acggcattat taaattacgc
     1141 cagatgtatt tgcgcgagat cgacaaggta aagcgcggcg aggatccgcg atgcatcgtg
     1201 cgcgacccgg caaagaataa aatgatcatc atccccgcct acgaaaaatg ggtgccggaa
     1261 agcgagcgca acctgggaat gaccgcgacg gcgggataag agggattggc cgcacccttc
     1321 gacaatctca gggcgatcgg caaggcaacg gcacagagtt aagattggat gattcaccac
     1381 gaaggcacga aggacacgaa ggtttgggaa cttgatactc cgaacttcgt gctcttcgcg
     1441 tcttcgtgat gaaaagctag cttgatatta cgctggagga tttatggcgg tacacgttgt
     1501 gaatgaaaat gatgtcgagc aggtcaagag cggacgcggc tttaccaagt ggctgcatgt
     1561 ctcgccgggt ggaagcggac cggagatgat gatccgccac tgggggccgg acaccgatat
     1621 tccggtgcac agtcatccct atcatgaaat gttttatgtg ctcgaaggcg agatcgaggt
     1681 cggcggcacg acctattccg ccggctcgtg catctacatc gaaaaagata cgccctacgg
     1741 gccgacgcgc gcgcccaagg gcggcaaggt gctgcgttat gccgaagccg gtattggcaa
     1801 atagcgtgga agcttacatc gatgccgacg ggctgaaaac attctacgtc aaggccggca
     1861 gcggctttcc cgtggtgttg tttcatggcg cggcgccggg cgcatcggct caggtcaatt
     1921 ggcagttgaa tattgaaccg ctggccgccg ccggattcac cgtctacgcc tacgatcaag
     1981 cagggtatgg ccgcagtgac aatcccgccg atctgtccat cgaatatcgc gtcacccatg
     2041 ccaaggcttt cgtcgatgcc ctgaaactcg atcgttacca cgtcgtcggc aactccgtcg
     2101 gcggttatat cgccgcgcgc ctggcactgg aagattctcg cgtcggcagg ttcgtaacca
     2161 cgactagcgg caccttggcg ccgaaaggat cggcgcagtc ccaagccttg gggcagaagc
     2221 attccgaaga gctgcgcgag tacgttccga gtctggcaaa catgcgcgcg ctgacgctgg
     2281 gcaccctgca ccgcaaagag ctggtcaccg aggagttggt gcgggcgcgt tacgagatga
     2341 gcatcggcaa gaatcaagca gcggcgcaag cgcgccaagg cgtcaagccg ccgcgttcgc
     2401 tcaccgacga attgcccagg ctcaaaacca agacgttgct tttatggggc aaccaagacc
     2461 gcggtgtttc agtcgaacgc ggcctgttgc tgtttcaact gattcccaac gcggagtttc
     2521 acttgtttga ccaatgcgcc ca
//
LOCUS       DATIRS010000939         2879 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1546015, whole genome shotgun sequence.
ACCESSION   DATIRS010000939 DATIRS010000000
VERSION     DATIRS010000939.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2879)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2879)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2879
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1546015"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(104..2098)
                     /locus_tag="VLM90_11865"
     CDS             complement(104..2098)
                     /locus_tag="VLM90_11865"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSQ13714.1"
                     /translation="MSSANILVVEDEAIVALDLSQRLTGLGYRVVDTVAEGEKVVAAV
                     LEHNPDLVLMDLRLAGPLDGIAAARQIAQVRDVPIVFLTAHSDPETLAQACLTGPFGY
                     ILKPFDERELHTQLEIALYRHGAERRVRESEARLRSIMDTAADCIMEIDDNGMLLNSN
                     PAAAHLFGYAAAEMAGRIACDLMPEFARIMQKDEAQWSHKTSGGKIFAEVRELSAIQK
                     DGAVIPVELTVSRKDDAHERSYITIVRDLRRRKQLENKLTQLVDDLRETDRRKDEFLA
                     TLSHELRNPLAPIRNAVTILKSVQPADDKFKWCCEILDTQVDQMSCVLEDLLDVSRIA
                     RGSLLLRQEWLGFREIMSHIVAIARADVEAAGHKLVVDLPENDVSLFADRARLTQIFS
                     NLLNNAAKYTEGNGEVRFSAKYDNGAIVVKIEDTGIGISAELLPHVFKMFKQADSSLE
                     RGRGGLGIGLALVKSLVALHGGTVEANSAGLGQGSVFTVRLPVAPVSPVAVEMPTTIV
                     EAAGQPAQLVRPIRILIVDDNKLQAQSLGLLVELWGFDVRLAFDGPQALAALANYSAD
                     VALIDIGLPGLSGFEVARQIRAQPQWRHMTLIAQTGWGRDSDRGNSGQAGFDHHFTKP
                     LNHEALEKILNQTAAKKLGTASVFDKFQRLDRTSPTKPSD"
     gene            complement(2095..>2879)
                     /locus_tag="VLM90_11870"
     CDS             complement(2095..>2879)
                     /locus_tag="VLM90_11870"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HSQ13715.1"
                     /translation="INPLILKSKVAVFVDLFRKTRELARLNEIMESEIEERVAQVRAS
                     LREKEILLKEVHHRVKNNMQIISSLLSLQAERAGATQRDFRDVRDRVRSMALVHEKLY
                     QSENLACVQIAEYARSLINDLFQAYASGLPKVQLRLDLESAEMPVDRAISFGLILNEL
                     ATNAFKHAFRDCDNGEIEIKLQTVPQGEIRLRFADNGRGFAAPSSWESADTLGLRLLR
                     MLTRQLGGQIKMRSDRGTTVELSFRIDPARDSPGGNESRVSS"
BASE COUNT          556 a          848 c          833 g          642 t
ORIGIN      
        1 acaccgccct accagtccga ttggattggc gcgctttgcc tgtcgcctta gctgcttggg
       61 gttgcggctt cgccgcgtcg ggggagattg cgctttgaac gactcaatcg ctgggtttcg
      121 ttggactggt tcgatcaagg cgttgaaatt tgtcgaaaac gctagctgtg ccaagctttt
      181 ttgccgcggt ctgattgaga attttttcca aagcctcgtg gttgagcggc ttggtgaaat
      241 gatgatcaaa ccccgcttgg cccgaattac cgcgatcgct gtcgcggccc caaccggtct
      301 gcgcaatcag ggtcatgtgg cgccattgcg gctgtgcgcg gatctgccgc gcgacttcaa
      361 aaccgctgag acccggcagg ccgatgtcga taagcgcgac atcagccgag tagttggcta
      421 aagccgcaag cgcttgcggc ccgtcaaaag cgagtcggac atcaaagccc catagctcga
      481 cgagaagccc gaggctttgg gcctgtaatt tattatcgtc gacgattaga atccgtatcg
      541 gtctaactaa ctgcgctggc tgcccggccg cctcgacgat ggttgtgggc atctcaactg
      601 caaccgggct gaccggcgcc accggcaacc gcaccgtaaa cacactacct tggccaaggc
      661 cggcgctatt agcctcaacc gtgccaccgt gtagcgcgac caggcttttc accaaagcga
      721 gaccgatgcc gaggccgccc cggccgcgtt ccaaactgct gtcggcttgc ttgaacattt
      781 tgaacacatg gggcaatagt tcagccgaga tgccgatgcc ggtatcttcg atttttacga
      841 cgattgcgcc gttgtcatat tttgccgaga accgaacctc gccgttgccc tcggtatatt
      901 tcgcggcatt gtttaaaagg ttggagaaga tttgcgtcag ccgggcacga tcggcaaaca
      961 gactgacgtc gttttcgggc aggtcaacga ccaacttatg ccccgcggct tcgacatcgg
     1021 cacgcgcgat tgcaacgata tgactcatga tttcgcgaaa tccgagccat tcttggcgca
     1081 gcaatagact gccccgggcg atccggctaa cgtcgagcag gtcttccaac acgcagctca
     1141 tctgatcgac ttgggtgtcg aggatttcgc agcaccattt aaatttgtcg tcggccggtt
     1201 ggacactctt caaaatagtc acggcattgc ggatcggcgc caggggattg cgtagttcgt
     1261 gcgacaacgt cgctaaaaat tcatccttgc gccggtcggt ctcacgcaga tcgtcaacca
     1321 gttgtgtgag tttgttctca agttgcttgc gccgtctgag atcgcgaacg atggtgatat
     1381 agctgcgctc gtgcgcatcg tctttgcggc ttaccgtaag ctcgacagga atgaccgccc
     1441 cgtctttttg gatggcgcta agttcccgga cctcggcaaa aattttccca ccgctggttt
     1501 tatgcgacca ctgcgcctcg tccttttgca tgatgcgggc aaattccggc atcaagtcgc
     1561 aggcgatgcg gccggccatt tcagccgcgg cgtaaccgaa taaatgggcg gcagcggggt
     1621 tgctgttaag cagcatgccg ttatcgtcga tttccatgat gcaatcggcc gccgtgtcca
     1681 tgatcgacct tagccgcgct tcgctttcgc gcacgcgccg ttcggcgcca tggcgataga
     1741 gcgcgatttc aagctgggtg tgcagctcgc gctcatcgaa gggcttcaaa atatagccga
     1801 aggggccggt taagcatgcc tgggcaaggg tttcggggtc ggaatgggcg gtcaagaaaa
     1861 cgatcgggac gtcgcgcacc tgcgcgatct gtcgcgctgc ggcgataccg tccaggggcc
     1921 cggccagtcg caggtccatc agcaccagat ccggattgtg ctcaagcacc gcggcgacca
     1981 ctttctcccc ttcggcgacg gtgtcgacga ctcggtaacc caggccggtc aagcgttggc
     2041 taagatcgag cgcgacgatc gcttcatctt cgaccactag aatgttggcg ctgctcatga
     2101 gctcaccctc gactcattgc cgcccggcga atcgcgcgca ggatcgattc taaagctcag
     2161 ctcaacggtc gtgccccggt cgctgcgcat tttgatttgc ccgccaagct ggcgggtcag
     2221 catgcgcagc aagcgcagcc ccaacgtatc ggcgctctcc cagctcgacg gcgcggcaaa
     2281 accccggccg ttgtcggcga aacgcaggcg gatttctccc tgcggcacag tttgcagttt
     2341 gatctcgatt tcgccgttgt cacagtcgcg aaacgcatgc ttgaaggcat tggtcgccaa
     2401 ctcgttgagg atcagcccga aggagatggc gcgatccaca ggcatctcgg cgctctcgag
     2461 atccaggcgg agttgcacct tgggcaggcc gctggcgtag gcttgaaaca gatcgttgat
     2521 caaactgcgc gcatattcgg cgatctgcac gcacgctaaa ttctccgact ggtagagctt
     2581 ctcgtgcacc agcgccatcg agcgcacgcg atcgcgcacg tcgcgaaagt cgcgctgggt
     2641 tgcgccggcg cgctcggctt gcaggctcag caggctcgag atgatttgca tgttattttt
     2701 tacccggtga tggacttcct tgagcaatat ctctttttcg cgcaggctcg cgcggacctg
     2761 cgccacccgc tcttcgatct cgctctccat tatttcgttc aggcgcgcca gctcgcgggt
     2821 cttgcgaaac agatcgacaa agacagcgac cttggatttc aggattaaag ggttgatcg
//
LOCUS       DATIRS010000940         5089 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1743046, whole genome shotgun sequence.
ACCESSION   DATIRS010000940 DATIRS010000000
VERSION     DATIRS010000940.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 5089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5089
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1743046"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(129..620)
                     /locus_tag="VLM90_11875"
     CDS             complement(129..620)
                     /locus_tag="VLM90_11875"
                     /inference="COORDINATES: protein motif:HMM:NF023395.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HSQ13716.1"
                     /translation="MQQLWAPWRMAYIDDGAKEPGCIFCTMYRQEDLKAALVLTHSRH
                     AVVMMNKYPYNNGHLLIAPKHHENSLASLAPEAYSDLSEVLRRAVEIVKTVLSPGGVN
                     VGMNLGKCAGAGIEDHLHWHIVPRWEGDTNFMPVIGETRVMPQHLADSYDRLQPHFHN
                     LRV"
     gene            complement(620..931)
                     /locus_tag="VLM90_11880"
     CDS             complement(620..931)
                     /locus_tag="VLM90_11880"
                     /inference="COORDINATES: protein motif:HMM:NF001222.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HSQ13717.1"
                     /translation="MTKRDLIDEVNKRFPHLSRRDSEVIINAIFDSMVDALAGGDRIE
                     IRGFGSFVVKNRRARQGRNPKSGALVSVAAKRVPFFKVGKELRLRVDGKPYDPEIDGE
                     D"
     gene            complement(989..1897)
                     /gene="sppA"
                     /locus_tag="VLM90_11885"
     CDS             complement(989..1897)
                     /gene="sppA"
                     /locus_tag="VLM90_11885"
                     /inference="COORDINATES: protein motif:HMM:TIGR00706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HSQ13718.1"
                     /translation="MATLTTKHSILRGLGILFVFILMVFCGTFFYAYLSGGDSKVLSL
                     FSGDGVGVLQVEGAIDDSRSVLAELRRFRQTAWIKAVVVRIDSPGGAVAPTQEIFEEI
                     QRTKKIKPCIASMGNVAASGGYYIASACDKILANPGTMTGSIGVIMQLSNFEELMKKI
                     GVKGVNIKSGANKDIGSPFQPLSQEGREILQALVDNVHSQFVTAVANGRGMDEARVRK
                     LADGRIYSGAQAKELGLVDQFGTLEDAIELAAKQAGLDGEPAVYYSRPERERWWDRLS
                     MGIFGVRLPASERGWLRYEWSLSMLQ"
     gene            complement(1918..3663)
                     /locus_tag="VLM90_11890"
     CDS             complement(1918..3663)
                     /locus_tag="VLM90_11890"
                     /inference="COORDINATES: protein motif:HMM:TIGR00717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HSQ13719.1"
                     /translation="MAEQEQQKPGAAAGGASEFEAMFEESLRTVKPGGIVKGRVVGIT
                     ATHVLIDVGYKSEGQIPIHEFTDRQGNVSAKVGDDVDVYFDSSENESGGIQLSRLRAE
                     NLKVWDEIEKAFNEGQGVEGLIVGKVKGGFKVDIGIAAFLPGSHVDIRPNRNLDRFIG
                     TRDRFAILKFNRMRGNVVLSRRELLEKERGELKQEILKVLEEGVILEGIIKNITGYGA
                     FVDLGGIDGILHISDMSGGRISHPSEIVQVGETVKVVVLKFDTEKERISLGMKQLTPD
                     PWQTVAEKYRIGTRVQGKVISIMDYGAFVELESGIEGLIHISEMSWTRKVTHPSKLLQ
                     VNQQVEVVVLNVDPGHRRISLGLKQVMANPWEAARDKYPVGTVVSGPVRNITDFGIFV
                     GIEEGIDGLVHISDLHWTKKVKHPSELYKKGDVVEAKVLGINVENERFSLGIKQIAPD
                     PWKAVADKYPVGSKLKGQVTSVPDFGVFVRIDEGVEGLIHVSQLSTERVDKPASLYKV
                     GDEVEAEVVSIDLNDRKIGLSVRALRRSEERQEMENYLKREKEGGRFSFESLLGDELR
                     LDRDDDSARGRKGRN"
     gene            complement(3669..4352)
                     /gene="cmk"
                     /locus_tag="VLM90_11895"
     CDS             complement(3669..4352)
                     /gene="cmk"
                     /locus_tag="VLM90_11895"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: protein motif:HMM:NF014300.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - cytidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HSQ13720.1"
                     /translation="MIIAIDGPSGAGKSTLAKRLAQELGFIYLDTGALYRALALKVLR
                     QSVDLADDDRLNRLVDDTEIDLRHRDGKLEVLLDGEDVGAQIRTPEVSQMASKVSALK
                     KVRVRMLELQREMGRRGSVVAEGRDIGTVIFPQAHVKIYLDASAGERARRRYEELKAA
                     GRPVDLQVTMREIEERDKRDSERDIAPLCKADDALLVDSSSIDAEQVAAMVLDQVKNQ
                     AKVNYIDRS"
     gene            complement(4397..>5089)
                     /locus_tag="VLM90_11900"
     CDS             complement(4397..>5089)
                     /locus_tag="VLM90_11900"
                     /inference="COORDINATES: protein motif:HMM:NF012497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13721.1"
                     /translation="MIRGFGAAVNVDGVHIGIKGGQTLRGQDVRIPGDISSAAFFLVA
                     AALIPGSDVTIRNVGCNPTRDGIVEILRAMGAAIELLNERTEAGERVVDIHVTGGQLR
                     GVDVGPELVARTIDEYPILAIAGAVAQGVTRFVDVKELRFKESDRIAAMTEGLHNLGV
                     KVEAGDDAMTIYGGQRLKGGAVRSFADHRVAMSFAVAGLVSGGGVEIDDPRCASISFP
                     TFFDLLEQICLH"
BASE COUNT         1027 a         1617 c         1324 g         1121 t
ORIGIN      
        1 cgcttttttt tagttcccct aatgtttttg cctcactcac ttgacttggc ctcccctcgg
       61 aagagttgtt gttgacggtt cctcttcgct gcttggcaat gccaagctac cacgacgctc
      121 tgacacactt aaaccctaag attgtgaaaa tgcggctgca gccggtcgta actgtcggcc
      181 aagtgctgcg gcatcacccg agtttcgccg atgaccggca tgaaattagt atcgccttcc
      241 cagcgcggca cgatatgcca gtgcagatga tcttcgatac ccgcgccggc gcacttacca
      301 agattcatcc cgacattgac gccgccgggg cttaatactg ttttgacgat ctccacggcg
      361 cgccgcaaaa cctcgctcag atcgctatat gcttccggcg ctaaactggc caggctattc
      421 tcatgatgct tgggtgcgat cagcagatgg ccgttgttgt atggatactt gttcatcata
      481 acgaccgcgt ggcggctatg cgtcagcacc aaagccgctt tcaagtcttc ctgccgatac
      541 atggtgcaaa aaatgcagcc cggctccttg gcgccgtcat cgatataagc catgcgccag
      601 ggcgcccaga gctgttgcat caatcttctc cgtcgatctc tggatcataa ggtttgccgt
      661 cgacccgtaa acgcaattct ttgccgactt taaaaaacgg cacgcgcttg gcggccaccg
      721 ataccaaggc gccgctcttg ggattgcgcc cctggcgggc gcggcggttt ttgacgacga
      781 aactaccgaa gccacggatt tcgatgcggt cgccgcccgc caaggcgtcg accatggaat
      841 cgaagatggc attgataata acctccgaat cccgccgtga gagatgaggg aaacgcttat
      901 tcacctcatc gatcaagtct cttttggtca taacatcacc ctcacaacag cttttttatt
      961 tttttaagat cggtgccggc aaccgcgctc actgcaacat cgacagcgac cattcataac
     1021 gcagccaacc gcgctcggaa gcaggcaagc gcacgccgaa gattcccatg gatagccggt
     1081 cccaccagcg ttcccgttcc gggcgggaat agtaaaccgc cggctcgccg tccaggccgg
     1141 cctgctttgc ggctagttcg atggcatcct ccagggtgcc gaattgatcg accaaaccga
     1201 gttccttcgc ttgcgcgccg gaatagatcc ggccatcggc gagcttgcga acgcgggctt
     1261 cgtccatgcc gcgcccgttg gcgaccgcgg tgacgaattg actatgcacg ttgtcgacca
     1321 gcgcttgcag gatctcgcgc ccttcttgtg acaaaggttg aaacggcgaa ccgatgtctt
     1381 tattggcgcc gcttttgata ttgactccct tgacgccgat ttttttcatc agctcttcga
     1441 agttgctgag ctgcatgatg acgccgatgg aaccggtcat ggtgcctgga ttggccaaga
     1501 tcttatcgca ggcgctggcg atataatacc cgccggacgc cgcgacgttg cccatggatg
     1561 cgatacaggg ctttatcttt ttggttcttt gaatttcctc gaagatctcc tgggtcggcg
     1621 ccaccgcgcc gcccgggctg tcgatgcgca ccaccaccgc tttgatccac gccgtctggc
     1681 gaaagcgccg gagctcggcg agcacggagc gcgaatcgtc aatcgcccct tcgacttgca
     1741 gtaccccgac accgtcaccg gaaaatagcg acaaaacctt ggaatcgcca ccgctcaggt
     1801 aggcatagaa aaacgtccca caaaacacca tcaatatgaa tacgaacaaa atccccagtc
     1861 cgcgcaggat cgagtgcttg gtcgtcagtg ttgccatgac tgcgtccgcg gccacgctta
     1921 gttgcggccc ttgcgcccgc gcgcgctgtc atcgtcgcgg tccaagcgca gttcatcacc
     1981 caacagcgat tcgaaggaaa accgaccgcc ctctttttcg cgcttgagat aattctccat
     2041 ctcctggcgc tcttcggagc ggcgcagggc acgcacgctg agaccgatct tgcggtcgtt
     2101 aagatcgatg ctgaccactt ccgcttcgac ctcatcgccg actttgtaca agctcgccgg
     2161 cttatcgacc cgctcggtgc tcagttgcga gacatgaatc aacccttcga ccccttcgtc
     2221 gatgcggaca aacacgccga agtcgggcac gctggtcacc tgccctttga gcttggagcc
     2281 gaccggatat ttgtcggcca cggccttcca gggatccgga gcgatctgct tgatgccgag
     2341 cgagaatcgt tcattttcga cattgattcc caagaccttg gcctcgacca catcgccctt
     2401 cttatagagt tcggacggat gcttgacctt cttggtccag tgcagatcag agatatggac
     2461 caaaccgtcg atgccttcct cgatgccgac aaagataccg aagtcggtga tgttgcgcac
     2521 cgggccgctg accacggtgc cgaccgggta tttatcccgc gccgcttccc agggattggc
     2581 catcacttgc ttcaagccaa gggagatccg ccggtggccg ggatcgacat tgaggaccac
     2641 gacttcgact tgctgattga cctgcaagag cttcgaggga tgagtgacct tgcgcgtcca
     2701 ggacatctcg gagatatgga tcaatccttc gatgccgctc tctaattcca cgaaggcgcc
     2761 gtagtccatg atgctgatga ctttaccttg caccctggtg ccgatgcggt atttctccgc
     2821 cacggtttgc caggggtcgg gggtgagctg cttcatgccg agggagatac gctccttttc
     2881 ggtatcgaac ttgagcacca ccaccttgac ggtttcgccc acctgaacga tctccgaagg
     2941 atggctgatc cgtccccccg acatatcgct gatatgcagg atgccgtcga tgccgccgag
     3001 atcgacgaag gcgccgtagc cggtgatgtt cttgatgata ccctcaagga tcacgccctc
     3061 ctcgagaact ttgaggatct cctgcttgag ctcgccacgt tccttctcca agagctcgcg
     3121 ccgcgacaac acgacgttgc cgcgcatgcg gttgaatttc aaaatcgcga agcggtcccg
     3181 ggtgccgatg aagcggtcga gattgcgatt gggccgaatg tcgacatggg aacccggtag
     3241 gaatgccgcg atgccgatat cgaccttgaa gccgcccttg accttgccga cgatcaaacc
     3301 ttcgacgcct tggccttcat tgaatgcctt ttcgatttca tcccagactt tgagattctc
     3361 ggcgcgcaag cgcgacagtt gaatgccgcc gctctcgttc tccgaggagt cgaaatagac
     3421 atcgacatcg tcgccgacct tggcgctgac gttgccttgg cgatcggtga actcgtggat
     3481 cggaatttgc ccctcggact tataaccgac atcgatcaaa acatgagtcg ccgtgatgcc
     3541 caccacccgt cctttgacga taccgccggg cttgaccgtg cgcaggctct cttcaaacat
     3601 cgcttcgaat tcactggcgc cgcctgccgc tgcgcctggt ttttgttgtt cctgttcagc
     3661 catgaaaact aactccgatc tatataattt acttttgctt ggttttttac ttgatcgagc
     3721 accatcgccg ccacttgctc ggcatcgata gacgacgagt cgaccagcaa cgcgtcgtcg
     3781 gccttgcaca acggcgcgat atcgcgctcg ctatcgcgtt tgtcgcgctc ctcgatctcg
     3841 cgcatcgtta cttgcaaatc caccggccgg ccggcggcct tgagttcttc gtaacgacgc
     3901 cgcgcccgct cccccgccga agcatcgaga tatattttta cgtgagcctg ggggaaaatc
     3961 actgttccga tatcgcgccc ctcggccacc acgctgccgc gccggcccat ttcgcgctgc
     4021 agttccagca tccgcacacg aacttttttc agcgccgata ccttggacgc catctggcta
     4081 acctccggtg tcctgatctg cgcgccgaca tcctcgccgt cgagcagcac ctcaagctta
     4141 ccatctcggt ggcgcaagtc gatctcggta tcgtcgacca gccggttaag gcggtcatca
     4201 tccgccaagt cgacactctg gcgcaagacc ttcaacgcca gcgcccggta caacgcaccg
     4261 gtatcgaggt aaataaaccc tagctcctga gccagtcgtt tggctaaagt gctcttgccg
     4321 gcgcccgatg gcccgtcgat ggcgataatc aaccgattcc cctttagatt gggccgacta
     4381 tcctctgtcc ctgcggttaa tgcaaacaaa tttgctccaa caaatcgaag aacgtcggga
     4441 acgatatact ggcacaacgg gggtcgtcga tctcgacccc gccaccactc accaagccgg
     4501 ccaccgcgaa ggacattgct actctatgat cggcgaaact gcgcaccgcg ccccccttca
     4561 accgctggcc accgtagatc gtcatcgcgt catcgcccgc ctcgactttc acgccaagat
     4621 tgtgcaagcc ctcggtcatg gcggcaatgc ggtcggattc cttgaaccgc aactccttca
     4681 catcaacgaa acgggtcact ccctgggcaa ccgcgccggc gatggccaag attgggtatt
     4741 cgtcgatggt gcgcgccacc agctcggggc cgacatcgac tccgcgcagt tgcccacccg
     4801 taacgtgaat atccaccacc cgctcaccgg cctcggttcg ttcattgagt aattcgatgg
     4861 ccgctcccat ggcgcggaga atctcaacga tgccgtcccg ggtcggattg cagccgacat
     4921 tgcggatcgt cacatccgag cccggaatca gcgccgccgc gacgagaaaa aacgccgccg
     4981 aagagatatc ccccggaatg cgcacatcct ggccgcgcag agtctgcccg cctttgatac
     5041 cgatatgaac gccgtcgacg ttaaccgcag cgccgaagcc gcgaatcat
//
LOCUS       DATIRS010000941         1748 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1448035, whole genome shotgun sequence.
ACCESSION   DATIRS010000941 DATIRS010000000
VERSION     DATIRS010000941.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1748)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1748)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1448035"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1361
                     /locus_tag="VLM90_11905"
     CDS             <1..1361
                     /locus_tag="VLM90_11905"
                     /inference="COORDINATES: protein motif:HMM:NF006203.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine pyrophosphate-requiring protein"
                     /protein_id="HSQ13722.1"
                     /translation="TPLTEEGLRGSRSNFIHWGQESFDQGSLVREFTRWDYELRNGDQ
                     VETVVDRALEMALGTPQVPVYLTLPREVLAQKMDSITIHPNRKAQAEALQPSPASIKR
                     TAELLRGAVNPLIITGRLGSDPTAVSAMVAFAEALVAPVVTPASPFVSMPNTHEFHLG
                     VSSAPYVKDADVIVVVESDVPWYPQQGKPAESAKVIQLARDPNYGDIPIRNFPKDISI
                     GGDPKLALELLAQELTSGPRNEKLLAERAAKIRAKHKQYRQGLIEKAEHGGSQRPISH
                     AWLAYCVDQVRDADTIVISDHGIGNEVLNIREPASYYGGSPAGGLGWGIGGGLGMKLA
                     RPEKTLIVTVGDGTYMFNNPTACHFVSEAYDLPLLTIICNNAIWHASKAATQQVMPDG
                     WAASTGNFPLTELAPSPRYEKVVEAHGGYGEMVDDPQQVLPALKRALKVVKEEKRRRC
                     SM"
BASE COUNT          380 a          517 c          509 g          342 t
ORIGIN      
        1 ggacgccgct gaccgaagaa gggctgcgcg gcagccggag taacttcatt cactgggggc
       61 aagagtcctt cgatcaggga agcctggtgc gtgagttcac ccggtgggac tatgagctgc
      121 gcaacggcga tcaggtggag accgtcgttg atcgcgcgct ggagatggcg ctgggcacgc
      181 cgcaggtacc ggtctatttg acgctgccgc gcgaagtgct ggcgcaaaaa atggactcga
      241 tcacgattca ccccaaccgc aaagcccaag ccgaagcgct gcagccgagc ccggcttcga
      301 tcaaacgcac ggccgagctc ctgcgcggcg cggtcaatcc cttgatcatc accggccggc
      361 tgggttccga tccgacggcg gtgagcgcga tggttgcgtt cgccgaagca ttagtcgcgc
      421 ctgtcgtcac gccggcgagt ccgttcgtga gcatgcccaa cacccatgag tttcatctcg
      481 gcgtcagctc cgcaccctat gtcaaagacg ccgatgtcat cgtcgtggtc gagtcggacg
      541 tgccctggta tccgcagcag ggcaagcccg cggaaagcgc caaggtgatt cagctcgccc
      601 gggatccgaa ctacggcgac attccaatcc gcaacttccc caaagacatc tccatcggtg
      661 gtgatcccaa gctcgcgctg gaattgctgg cgcaggaatt aaccagcggg ccacgcaacg
      721 aaaaattact cgccgagcgt gccgcaaaga ttcgcgccaa gcacaaacaa tatcgccaag
      781 ggcttattga aaaagccgag catggcggca gccagagacc gatcagccac gcgtggctcg
      841 cctactgcgt cgatcaagtg cgcgacgccg acaccattgt gatcagcgac catggcatcg
      901 gcaacgaagt tctcaacata cgcgagccgg caagttacta cggcggttct cccgccggcg
      961 gcctcggctg gggtattggc ggtggcttgg gcatgaagct cgcccgccct gagaaaactt
     1021 taatcgtcac cgtcggcgat ggaacttata tgttcaacaa tcccaccgcc tgccattttg
     1081 tttcggaggc gtacgacctg ccgctgctga cgatcatctg caacaatgcg atctggcacg
     1141 ccagcaaggc ggcgacccag caggtgatgc cggacggctg ggcggcgagc acgggaaatt
     1201 ttccgttgac cgagttagcg ccgtcgccgc gctacgaaaa agtcgtcgag gcccatggcg
     1261 gctacggcga gatggtcgac gacccgcaac aagtgctgcc ggcgctcaag cgcgccctca
     1321 aagtcgtcaa agaggaaaag cgccggcggt gctcaatgtg atttgcggat ctcattagac
     1381 cggatcattc agatttttgt tgctttgagc tcgtttgtct ttacggcaag cggatgggaa
     1441 tcagcgtttt cgattcttca tcggaaacgg ccgctcgcag cgccgttcaa gcactcggtg
     1501 tcaatccaca gtatgacgtg atcttgttgc agagcggcaa ttaggatcct tattgttgcc
     1561 agcaaacgct tgaaccgagt acaatcgcat atacgactgc gtcaatgccg ggtcgccgtg
     1621 agcttagcta accggtttga cctgcgtaag ctatgaaagc aataagaaaa tatttagcgg
     1681 cgataaagca tatattgatc gcagcgccgg ttcttctaac cctcctcggc gtcctccatt
     1741 ttccctat
//
LOCUS       DATIRS010000942         1957 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1938059, whole genome shotgun sequence.
ACCESSION   DATIRS010000942 DATIRS010000000
VERSION     DATIRS010000942.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1957
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1938059"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..607)
                     /locus_tag="VLM90_11910"
     CDS             complement(<1..607)
                     /locus_tag="VLM90_11910"
                     /inference="COORDINATES: protein motif:HMM:NF014196.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliH/SctL family protein"
                     /protein_id="HSQ13723.1"
                     /translation="MSRLVARDDLRAAEVQLYRQADLDGDTMAPAPAGDADTDYRGFE
                     LESLDALELAPWWILQSAQEQAVEIIAQANVQADQLRQQASCDNAAAGREQALQDLMP
                     SLVAFANASQSLLVFEEQLISRCAPQIVDLALQIAAKVIAKAVDADAEIVASVLERAE
                     REALDAKQLRIWLNPTDHQLLAELRPDLVKIGNDGKRTIEVF"
     gene            complement(600..1628)
                     /gene="fliG"
                     /locus_tag="VLM90_11915"
     CDS             complement(600..1628)
                     /gene="fliG"
                     /locus_tag="VLM90_11915"
                     /inference="COORDINATES: protein motif:HMM:TIGR00207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009433 - bacterial-type flagellum basal
                     body, C ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HSQ13724.1"
                     /translation="MADDGRAKKKPTLTGPEKAAIFLALVGEELAGAIAGELQEKDIV
                     MLRQGVHRMAQIETEHIDEVFEETCKILKKANIFAEGTNDYLQRVLTKAMGAEKAATV
                     LSRIFTEEGDESYGIDSLHEMDAKVLGQFLQEEHPQTIAFVLAHLYPAHAGEVFGTLS
                     EDKQAEVAYRITSLGSTSPGAIEEISKVLRNAVRQVQGKQVGGVRPVAEILNFVDKAT
                     EERVMAGLGEYEPQLVDGIRQLMFTFEDLGKIDDASMQVLVREIEKDKWVMAMRTASP
                     ALKKKLFANMSERAGTLLKEEIENMGPVRLRDVEGVQREVIDRARQLEGEGKVFLSSG
                     KSKEDLLV"
     gene            complement(1636..>1957)
                     /locus_tag="VLM90_11920"
     CDS             complement(1636..>1957)
                     /locus_tag="VLM90_11920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13725.1"
                     /translation="GGALLVLGTLAFFMLRRKKPAASAAEPAAAMAALPAEPSASAVA
                     IQEEVAAAAQKIVVSEDLRKEQLAQIAHDYHDASVRIIRTWLQEDAAKARAAAASGGI
                     IANP"
BASE COUNT          336 a          618 c          570 g          433 t
ORIGIN      
        1 cgaaaacctc gatggtgcgc ttgccgtcgt tgccgatttt gaccaagtcc ggcctgagtt
       61 cagcgagcag ctggtggtcg gtcgggttga gccaaatgcg cagctgtttg gcgtcgaggg
      121 cctcgcgttc ggcgcgctcg agaaccgaag caacgatctc ggcgtcagcg tcgaccgcct
      181 tggcgatcac cttggccgcg atctgcagcg ccaagtcaac gatctgcggc gcgcaacgcg
      241 agatcaattg ctcctcgaag acaagcagcg attggctggc gttggcaaag gcgaccagcg
      301 acggcatgag atcctgcagc gcttgctcgc gccccgccgc ggcgttgtca cacgacgctt
      361 gctggcgcag ctggtccgcc tgcacgtttg cctgggcgat gatctcgacg gcctgttcct
      421 gggcggactg aaggatccac catggggcga gctcgagcgc gtcgagcgac tctaactcaa
      481 acccgcgata gtctgtgtcg gcgtcgccgg ccggtgccgg cgccatcgta tcgccgtcca
      541 gatccgcttg gcggtagagt tgaacttccg ccgcccgtaa gtcgtcgcgc gcgaccagcc
      601 tagacaagca gatcctcctt gctcttgccg ctggagagaa acactttgcc ctcgccttcg
      661 agttggcgcg cgcggtcgat gacttcgcgt tggacgcctt cgacgtcgcg cagccgcacc
      721 ggccccatgt tctcgatttc ttctttgagc aaggtaccgg cgcgctccga catgttggcg
      781 aaaagtttct ttttgagggc gggactcgcc gtgcgcatgg ccatgaccca tttgtctttt
      841 tcgatttccc ggaccagcac ctgcatgctg gcatcgtcga ttttgcccaa gtcttcgaag
      901 gtaaacatca actggcgaat gccgtcgact aactgaggtt cgtattcgcc caacccagcc
      961 atcacccgct cttcggtggc tttgtcgaca aagtttaaga tttccgccac cgggcgcacg
     1021 ccgcccactt gcttgccctg gacttggcgc acggcgttgc gcaggacttt gctgatctcc
     1081 tcgatggcgc ccggagaggt gctgccgaga ctggtaatgc gataggcgac ctccgcctgt
     1141 ttgtcttccg aaagcgtccc gaagacctcg ccggcatggg ccgggtagag gtgggccaac
     1201 acaaacgcga tggtctgcgg gtgttcctct tggagaaact ggccaaggac tttggcgtcc
     1261 atctcgtgca gcgaatcgat accgtaggat tcatcgcctt cctcggtaaa aatacggctc
     1321 aataccgtcg cggccttctc cgcccccatt gctttggtca atacccgttg cagataatcg
     1381 ttggtgcctt cagcgaagat attggccttc ttgagaatct tgcaggtttc ttcaaagacc
     1441 tcgtcgatat gctcggtttc gatctgtgcc atgcgatgga cgccctggcg cagcatgaca
     1501 atatcttttt cctgcaactc gccggcgatg gcgccggcga gctcttcgcc gaccaaggcc
     1561 aagaaaatcg ccgccttctc gggaccggtt aaagttggtt ttttcttcgc tctgccgtcg
     1621 tcagccatat ttcaattagg ggttggcaat gatgccgcca ctcgctgcgg cagcacgggc
     1681 cttcgccgcg tcctcttgta accaggttcg aatgatccgc accgaggcgt catgatagtc
     1741 atgggcgatc tgcgccaact gctctttgcg cagatcttcc gacacgacga tcttttgcgc
     1801 cgccgccgcc acttcttcct gtatcgccac cgcactggcg gacggttccg ctggcagcgc
     1861 ggccatcgcc gccgccggct cggcggcgct cgccgccggt tttttacgcc ggagcatgaa
     1921 gaatgccaag gtgcccaaga ccaagagcgc gccgcca
//
LOCUS       DATIRS010000943         1650 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_366167, whole genome shotgun sequence.
ACCESSION   DATIRS010000943 DATIRS010000000
VERSION     DATIRS010000943.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1650)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1650)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1650
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_366167"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            170..1207
                     /locus_tag="VLM90_11925"
     CDS             170..1207
                     /locus_tag="VLM90_11925"
                     /inference="COORDINATES: protein motif:HMM:TIGR02122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HSQ13726.1"
                     /translation="MRRYPARGVLSLSGVLIALLAVADVNAQKLPASTTIGTNPAGTV
                     FYAVGAGLAKLISDTGQMQSVVQPYTGTSSLLPLLDSGEIDFAIINAVESNLAYQGPN
                     RLKIGGKNPLPHVPNARLIMRGSPLFIGLVTKKDGIKSIAEAKGKRLAGEYPANIAIW
                     YHGYAALASAGLTWNDVKVVPVPAVNDGIDAIVQGRADAAIHAIGAAKVKEADASVGV
                     RIVPLDCTAQGDARVRKAVPGYSTTSLKSGFSTGVIGDTCVLNFDIYFLGHKGLSNDV
                     VLASLKAIWDNIDKLPPLHAQFKEWTRERAASADVTLAYHPAAIQFYKEKNLWNAKLD
                     EVQKRLMAVNP"
     gene            1356..>1650
                     /locus_tag="VLM90_11930"
     CDS             1356..>1650
                     /locus_tag="VLM90_11930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13727.1"
                     /translation="MRNRRIGILCFVLIAACLGGEMAQAQKLPASTTIGTNPAGSLFY
                     SVASGLAKVISEAGPMQSVVQPYTGSSTFLPLLDNGELDFGIINAVDMGLAYQG"
BASE COUNT          382 a          470 c          476 g          322 t
ORIGIN      
        1 aaggtcgcga acggcaggaa gttcaaaagg accggctatg aaactcttga ctcgctttga
       61 ccttcgagcg cttcatagcg cggctaggat tacgcgcggc gtcgcaaaca aattgcccat
      121 gccgggcgaa ttttcaacta tggggggaca aaacctcacg gaggtgacca tgcgcagata
      181 cccggccaga ggtgtcttga gtttgtcggg agtcctaatc gcgctgctcg ccgtcgccga
      241 tgtcaatgcg cagaaacttc ccgcttcgac gaccattggc accaacccgg ccggcactgt
      301 tttctacgcc gtcggcgcgg gcctggcgaa gttgatcagc gacaccggac agatgcaatc
      361 ggtggtgcag ccctatacag ggaccagcag cttgctgccc ctgctcgaca gcggcgagat
      421 cgacttcgcc attatcaatg ccgtcgaaag caatctcgcc taccagggac cgaaccggtt
      481 gaagatcggc ggcaagaatc ccttgccgca cgtgccaaac gcaagattga tcatgcgcgg
      541 ctcgccgttg tttatcggcc ttgtgacaaa aaaagacggc atcaaaagca tcgctgaagc
      601 caagggtaaa cgacttgccg gagagtatcc tgccaatatc gcgatctggt accacggcta
      661 cgccgcgctc gcgagcgcag gcctcacctg gaacgatgtc aaagtggtgc cggttcccgc
      721 cgtcaacgac ggcatcgacg ccatcgtcca aggccgggcc gacgcggcca tccacgcgat
      781 tggcgcggcc aaggtcaagg aggccgatgc gtcagtcggt gtgcgcatcg ttccgctcga
      841 ttgcacggcg caaggcgatg ctcgcgtaag aaaagcagtt ccggggtatt cgacgacgag
      901 tctcaaatca ggattctcta ccggcgtcat cggcgatact tgtgttttga acttcgatat
      961 ctactttctg ggtcacaaag gactctccaa cgatgtggtg ctggcgtcgc tcaaagcgat
     1021 ctgggacaac atcgataaat tgccgccgct gcacgcacaa ttcaaagaat ggacgcgcga
     1081 acgcgccgcc tccgccgatg tcacgctggc gtatcacccc gcggcgatac aattctataa
     1141 ggagaaaaat ctctggaacg cgaaactaga cgaggttcag aaaagactca tggcggtgaa
     1201 tccgtaaaag aattctgaaa acttggccgc accgaaggtc aaattgtcgc ccgcaagacg
     1261 caaagatcgc aaggaaagcg attgtcattt cgacccatgg gagaaatcct tcttagcgcc
     1321 gtcgcggtag catttgagat atgcaggagg acaagatgcg caaccgtcga attggtattc
     1381 tatgtttcgt gctgatcgcc gcgtgtctcg gtggcgagat ggcgcaggcg cagaaactcc
     1441 ccgcgtcgac gaccatcggc actaacccgg ccggcagcct gttctattcg gtggcgagcg
     1501 gtttggcaaa ggtgatcagc gaggccgggc cgatgcagtc cgtggttcag ccttataccg
     1561 gcagcagcac tttcttgccg ttgttagaca acggcgagct cgatttcggc atcatcaacg
     1621 ccgtcgatat gggactcgcg taccagggac
//
LOCUS       DATIRS010000944         5827 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1546580, whole genome shotgun sequence.
ACCESSION   DATIRS010000944 DATIRS010000000
VERSION     DATIRS010000944.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 5827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5827
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1546580"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(49..1140)
                     /locus_tag="VLM90_11935"
     CDS             complement(49..1140)
                     /locus_tag="VLM90_11935"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HSQ13728.1"
                     /translation="MLAVNWDNALVLQTSFLGDLVLTLPLIAEIRSRFPVRKLSLMCT
                     PLGRELLQDHPAIDEILVDDKQRAHRGWRGLTAQAALLRQQRYTVALTPHKSARSAFM
                     LYRANIPQRIGFRQSKGWFFFHHCAERDPARHDVERNLSVLQPLGVRVQDCVRELELP
                     LRRQIDDAVADKLWQSGVVDGKPAIGINSGSVWPTKRWWLEGFAEFIGLLKAKLDCQV
                     LLFGAREDAEGVKRLFERCGGAALDLAGKFSLRELPAAIGRCQVFVTNDSGPMHIAVA
                     RKVPTVALFCATTPDLGFYPYSGNAIVIQKQLGCRPCTSHGGRRCPLVHENCIRQIRA
                     QTVLAAVEKLLTGQARGDHERFLPEFLAA"
     gene            complement(1144..1311)
                     /locus_tag="VLM90_11940"
     CDS             complement(1144..1311)
                     /locus_tag="VLM90_11940"
                     /inference="COORDINATES: protein motif:HMM:NF015899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HSQ13729.1"
                     /translation="MAISKELLDILACPKCKGDIHLNDQGDGLVCQSCRLMYAIKDDI
                     PVMLIDEAVPV"
     gene            complement(1362..2225)
                     /locus_tag="VLM90_11945"
     CDS             complement(1362..2225)
                     /locus_tag="VLM90_11945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13730.1"
                     /translation="MGDYSEEDIGNIVSLEHVNVQIPDQSLATFFSVVGLGCTRDPYL
                     NVGLNNMWANIGEQQFHLPTRSPQVIDGYIGLVVPHLEGLAQRLEAVAGGLKDTQFAF
                     QSDGDCMIVTCPWGNRYRCHASQPSAFGDMAAGMPYVEFAVPRGAMAGILRFYQAAFG
                     APTVVESDGQGEFGRVKIGRHQSLLFRETDRPLRPYDGHHIAIYVANFSTPYGFLQSC
                     GGISEDVRNHQFRFKNIVDPFDGSAKFSLEHEVRSLRHPMYNRFFVNRDVSQSQRAYR
                     RGWDAYTPYLR"
     gene            complement(2229..3170)
                     /locus_tag="VLM90_11950"
     CDS             complement(2229..3170)
                     /locus_tag="VLM90_11950"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HSQ13731.1"
                     /translation="MKSVVTGAAGFIGSHLVEKLLGAGHDVVGVDNFLDNYPRHFKEN
                     NLAGFRGHAKFTFLNEDLTQTDLKALLRDVGYVFHLAGQPGVRSSWGSEFSRYTENNI
                     SATQLLLEAAKDLKLGKFVYASTSSVYGDTTDLPMREDGLTRPVSPYGATKLAAEHLC
                     HLYSKAYGVPTVALRFFTVYGPRQRPDMFFHIFMRALLNGDDVPLYDDGEQTRDFTFC
                     SDIVDGLFNAADSAAQGEVFNLGGGSQVSLLTAIALAEKIAGVTAKLQRFDRQRGDVR
                     HTSAQLDQAREKLNYRPQVDLAEGLKQQWQWIRSLGR"
     gene            complement(3167..3760)
                     /locus_tag="VLM90_11955"
     CDS             complement(3167..3760)
                     /locus_tag="VLM90_11955"
                     /inference="COORDINATES: protein motif:HMM:TIGR01662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HSQ13732.1"
                     /translation="MTLAKLQPAIFLDRDGTLIREVGYLCRPDQIELLDGVPAAIRAL
                     RDGGFKTVVVTNQSAVARGWLSEAGLKQIHRLLLDKLAQQGALLDAIYYCPHHPSEGI
                     DGYRLACDCRKPNPGMIHRAANDLALAPKRSYVVGDQNVDRELALRVGATPVLVRSNG
                     EQVLVDDVANSPVFANLKLAAEWILARPQAPIEDIEL"
     gene            complement(3757..4851)
                     /gene="lpxK"
                     /locus_tag="VLM90_11960"
     CDS             complement(3757..4851)
                     /gene="lpxK"
                     /locus_tag="VLM90_11960"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: protein motif:HMM:NF014645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HSQ13733.1"
                     /translation="MASLTVRGVWERRGFAGTLLGILLWPASIGYSVVAQLRNAFFTR
                     GWIKSVRLPRPVISIGNLTVGGTGKTPTCLWLAGELRRQGLKVAILSRGYRRTETQPV
                     ILQPCKLSGDLAQNEDELAQAGDEPLMMARLYDQTVGVGADRVRSAQELLRRDDKIDA
                     FILDDGFQHRHVKRDVDLVLLGSDCSGVVLPAGPFREPRRNLQRGDFWLVTGAEAQWR
                     RYLPPERSSAVFTGTLQPLDLITYDARRWKHYPLTVLHHSKILTIAGIANPDNFYQSI
                     HEWEGQIVHTLEFPDHHVYSAKDWQEISRMARLVDLIVTTEKDILKLIGFPFARDKLL
                     ALRVGMEVTGGDRLVMALAARIRQAHCRES"
     gene            complement(4889..>5827)
                     /locus_tag="VLM90_11965"
     CDS             complement(4889..>5827)
                     /locus_tag="VLM90_11965"
                     /inference="COORDINATES: protein motif:HMM:NF016311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase N-terminal domain-containing
                     protein"
                     /protein_id="HSQ13734.1"
                     /translation="RALTQWNPSLMLFVETEIWPNLLRECFRRSIPTVLVSGRLSARS
                     LPRYERFRGFFCQVVRRFAAIGMQTGEDAARIVRLGADANKVSVVGSLKWAGAAPQSW
                     RFTDVPRHGKRLLIAGSTHAGEEQMLLASFAALRPRFPELSMVLAPRHPERFAEVEAL
                     LRGSGFSWCRRSVAADDRLFATDILLLDTVGELSDFFAVGDVAFVGGSLVDVGGHNIL
                     EPERSGKAIIFGPYMANMQAIAEQFKAQGAAVEVADSAALSTALANLLSDDGKRIAMG
                     RLALAASANGDGAVQRNYALAARYLSDSPVAPAPVG"
BASE COUNT         1305 a         1772 c         1634 g         1116 t
ORIGIN      
        1 cacgaataat ccaggctagc agatgttacc ctggcggtga agataaattt aagcggcgag
       61 aaattccggt agaaagcgct cgtgatctcc gcgcgcctgg cccgtcaaaa gcttttccac
      121 cgccgctaaa accgtttgag cgcgaatctg gcgaatgcaa ttctcatgga ccaacggaca
      181 ccttctgccg ccatgggacg tacagggacg gcaaccgagc tgtttctgaa taacgatggc
      241 attgccgctg taaggataga accccaggtc tggcgtggtc gcacagaata gcgccaccgt
      301 tggcaccttg cgcgcaacgg cgatatgcat cggaccgctg tcgttggtga cgaaaacctg
      361 gcagcgcccg atggcggcgg gtagttcgcg caagctaaac ttgccggcaa ggtcgagcgc
      421 cgcgccgccg cagcgctcga acaatcgttt gaccccctcg gcatcttccc gggcgccgaa
      481 aagtaaaacc tgacaatcga gctttgcctt aagcagccct ataaactcgg cgaacccttc
      541 cagccaccag cgcttggtcg gccataccga gccggaattt atgccgatgg ccggtttgcc
      601 atcaacgacg ccggattgcc aaagtttatc ggcgacggca tcgtcgattt gccggcgcag
      661 cggcagctcg agctccctga cacaatcttg cacacgcacc ccgaggggct gcaaaaccga
      721 taagttccgc tcgacatcat gacgagcggg atcgcgctcg gcgcaatgat gaaagaaaaa
      781 ccaacccttg ctctggcgaa agccgattcg ttgcggaatg ttcgctcgat agagcatgaa
      841 agcgctgcgc gccgacttat gcggcgtcaa ggccacggta taccgttgct gccgcagcaa
      901 tgccgcttgc gcggtcaaac cgcgccaccc gcgatgcgct ctttgcttat catcgacgag
      961 gatctcgtca attgccggat gatcctgcaa gagttctcga ccgagcgggg tgcacatcag
     1021 cgacagtttt ctgaccggaa atctgctcct gatttcggcg atcaagggca acgtcagcac
     1081 caggtcgccg agaaagctcg tctgcaacac cagcgcattg tcccaattca ccgcgagcat
     1141 tttttacacc ggcaccgcct cgtcgatcaa catcaccggg atgtcgtcct tgatcgcgta
     1201 catcagccgg caggactgac aaaccagccc gtcgccttgg tcattgagat ggatgtcccc
     1261 tttgcatttg ggacaggcga gaatgtcgag cagttcttta ctgattgcca tggttacagc
     1321 ctccaatttc gcttgcaaac gcaaattcga atcagcctag cctagcgcag atacggcgtg
     1381 taggcgtccc agccgcgccg gtaagcgcgc tggctttgac tgacatcgcg attgacgaag
     1441 aaacggttat acatcggatg gcgcagcgat cgcacttcat gctccagaga gaacttggcg
     1501 ctgccgtcga aggggtcgac gatatttttg aagcgaaatt ggtggttacg cacatcttcc
     1561 gatatcccgc cgcagctttg caaaaaacca tagggagtgg aaaaattcgc cacataaata
     1621 gcgatatggt gaccgtcgta gggtctgagg ggccggtcgg tttcgcggaa caacagcgac
     1681 tgatggcggc cgatcttgac ccggccgaac tcgccctggc cgtctgactc gacgacggtc
     1741 ggcgcgccaa atgccgcttg gtagaagcgc aagatccccg ccatggcgcc gcgcggcacg
     1801 gcaaactcaa cataaggcat ccccgccgcc atatcgccga acgccgacgg ttggctggcg
     1861 tggcaacggt agcgattgcc ccagggacag gtaacgatca tgcaatcccc gtctgattga
     1921 aaagcaaact gggtgtcctt gagcccaccg gcgaccgctt ccaagcgctg cgccaaacct
     1981 tccaaatgcg gcactaccag gccgatgtaa ccatcgataa cctgcggact gcgcgtcggc
     2041 aggtgaaact gttgctcgcc gatgttagcc cacatgttgt tgaggccaac gttgagatac
     2101 ggatcgcggg tgcatcccag gcccacgaca gagaagaacg tcgccaggct ctgatcgggg
     2161 atctgcacgt tgacatgttc gagggaaacg atattgccga tgtcctcttc gctatagtcg
     2221 cccatagttt acctccccag tgaacgaatc cactgccatt gttgtttcag tccctctgcc
     2281 aaatcgactt gcggccgata gtttaatttc tcgcgcgcct ggtccaactg cgcgctggta
     2341 tggcggacat cgccgcgctg gcggtcgaag cgctggagct tggccgtgac cccggcgatc
     2401 ttttccgcca aggcaatggc cgtgagcagg ctcacttggg agccgccgcc gagattgaac
     2461 acttcgccct gggcagcaga atccgctgcg ttgaacaatc cgtcgacgat gtccgaacag
     2521 aaagtgaaat cgcgggtctg ctcgccatcg tcgtagagcg gcacgtcatc gccgttcaac
     2581 agcgcgcgca tgaaaatatg aaaaaacata tcgggccgct gacgcggccc atagaccgta
     2641 aagaagcgca gtgccacggt gggaacacca taggctttgc tgtaaagatg gcaaagatgc
     2701 tcggcggcca acttggtggc gccatagggt gacaccggcc gcgtcaaacc atcttcgcgc
     2761 atgggcagat cggtggtatc gccatagacc gaagaggtcg aggcatagac gaatttgcca
     2821 agtttgagat ccttggctgc ttcgagcagt agctgcgtgg cgctgatgtt attctccgtg
     2881 taacgggaaa actcgctgcc ccagctcgag cgcacacccg gctggccggc gagatgaaaa
     2941 acataaccga cgtcgcgcag taacgctttg agatcggtct gggtgagatc ctcgttgagg
     3001 aaggtaaatt tcgcgtggcc gcggaagccg gccagattgt tctctttaaa atgacgtgga
     3061 tagttgtcga gaaagttatc gacaccgacc acgtcgtggc cggcgccgag cagcttttca
     3121 actagatggg aaccgataaa tccggcagca ccggtaacga cagacttcat agttcaatat
     3181 cctcgatcgg cgcctgaggg cgcgccaaga tccactcggc ggctaacttt agattggcga
     3241 aaacaggtga gttagcaaca tcgtcgacaa gaacctgttc gccgttgctg cgcactaaga
     3301 caggggtagc ccccacccgc agggcgagct cgcgatcgac attttgatcg cccaccacgt
     3361 aggatcgctt gggcgccaag gccagatcgt tggcggcgcg gtgaatcatc cctggattcg
     3421 gtttacggca atcgcaggcc agccgatagc cgtcgatgcc ctcgctcgga tgatgcgggc
     3481 aataatagat cgcgtccaac agcgctccct gctgcgccag cttgtctagt agcagccgat
     3541 gaatttgctt taaccccgct tcgctgagcc agccgcgcgc caccgcagac tgattggtca
     3601 ccaccaccgt cttgaaaccg ccatcacgca aggcgcggat cgccgccggt acgccgtcca
     3661 gcagttcgat ctgatcggga cggcaaagat agcccacttc acgaatcaac gtgccgtcac
     3721 ggtcgagaaa tatcgccggt tggagtttag ccaatgtcat gattcccggc aatgggcttg
     3781 acgaatcctg gcggccagcg ccatcaccag tcgatcgccg ccggtgacct ccatgccaac
     3841 cctgagcgcc agcagtttat cgcgcgcgaa gggaaagcca atcaacttga gaatatcttt
     3901 ctcggtggtc acgattaaat cgaccaaccg cgccatccgg ctaatctcct gccagtcctt
     3961 ggcactgtaa acatggtgat ccggaaactc caaggtatgg acgatttgcc cttcccactc
     4021 atggatcgac tgataaaaat tatctggatt ggcgatccct gcgatcgtca ggatcttgct
     4081 atgatgcagc acggtcagcg gatagtgctt ccagcggcgg gcatcgtagg tgatcagatc
     4141 caagggttgc aacgtaccgg taaaaaccgc gctggaacgc tcaggcggca agtaacggcg
     4201 ccattgcgcc tccgccccgg tgaccagcca aaaatcgcca cgctgcaagt tgcgccgcgg
     4261 ttcgcgaaac ggaccggccg gcagcacgac accggaacag tcgctgccca gtagcactag
     4321 atcgacatcg cgtttgacat gacgatgctg gaagccatcg tcgaggataa acgcatctat
     4381 cttatcgtcg cggcgcagca attcctgcgc tgatcgcacg cggtccgcgc cgacacccac
     4441 ggtctggtcg tagagacgcg ccatcatcaa aggttcgtcg ccagcctgcg ccagctcgtc
     4501 ctcgttctgc gccaaatcgc cgctcagttt gcacggttgc aagatcaccg gctgagtttc
     4561 cgtgcgccgg tatccccggc tcaggatcgc cactttcagg ccttggcggc gcaactcacc
     4621 ggcgagccaa agacaggtcg gcgtcttgcc ggtgccgcct accgtcaggt tgccgatgct
     4681 gatcaccggc ctgggtaggc gaaccgactt aatccatccc cgggtgaaaa aggcattgcg
     4741 cagttgagca accacggaat aaccgatcga cgccggccat agtaggattc ccagcagtgt
     4801 gccagcgaaa cccctccgct cccacacccc gcgcaccgtc agactagcca tagcgcgcta
     4861 aatcgagtgc tccatttata ttattatatt atccaaccgg cgccggcgcc actggcgagt
     4921 ctgacaaata acgcgccgcc agggcgtagt tacgttgaac cgcgccatcg ccattggccg
     4981 aagccgccag ggctagccgg cccatggcga tgcgcttgcc atcgtccgat aacaaattcg
     5041 ccaaagcggt ggacaaggca gcgctatcgg cgacttcgac ggcggcgcct tgggctttga
     5101 actgctcggc aatcgcctgc atattggcca tgtagggtcc gaaaattatc gctttgccgg
     5161 accgctccgg ttcgaggata ttatggccgc cgacatcgac cagactgccg ccgacaaacg
     5221 cgacatcacc cactgcaaaa aaatcactga gctcgccgac cgtatcgaga agtaaaatgt
     5281 ccgttgcaaa taaccgatca tccgcggcga cactgcggcg gcaccagcta aagccgctac
     5341 ctcgcaagag cgcctcaact tcggcaaacc gctcgggatg gcgcggtgcc aagaccatcg
     5401 acagctcggg aaagcgtggc cgtagcgcgg caaaacttgc cagcagcatc tgctcttcac
     5461 ccgcatgggt gctgccggcg atcagaagtc tcttgccatg ccgcggcacg tcggtgaatc
     5521 gccacgactg gggcgccgct ccggcccatt tgagactacc gaccaccgac accttattgg
     5581 catcagcgcc aagtctaacg atccgcgccg cgtcttcgcc ggtctgcatg ccaatggcgg
     5641 cgaaccgccg caccacctgg caaaaaaaac cgcggaatct ttcgtaacga ggcaaggacc
     5701 gtgccgacaa gcggccgctc actaggaccg tcgggatgct gcggcgaaaa cattctctca
     5761 ataagttggg ccagatctcg gtttcgacga aaagcatcaa tgacgggttc cactgggtca
     5821 aggcccg
//
LOCUS       DATIRS010000945         3751 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1938206, whole genome shotgun sequence.
ACCESSION   DATIRS010000945 DATIRS010000000
VERSION     DATIRS010000945.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3751)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3751)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3751
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1938206"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            160..561
                     /locus_tag="VLM90_11970"
     CDS             160..561
                     /locus_tag="VLM90_11970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13735.1"
                     /translation="METPAILCPQQAVGNIRSKSVIFAPVHYSAMAYALPLDLANGEL
                     MNKEQVDSFARLLHQQRDHFVEEFRRAEQDLEAIAEERESELEEHAQEEHSARLLTRL
                     DDRMLHAVKDVDLALQKKRTRICRPGETDSQ"
     gene            558..1538
                     /locus_tag="VLM90_11975"
     CDS             558..1538
                     /locus_tag="VLM90_11975"
                     /inference="COORDINATES: protein motif:HMM:NF026066.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HSQ13736.1"
                     /translation="MKNEATPTHRRTQMKNPLAANTVNFRIARRLEEVAQILASQGAN
                     PFRVQAYRHAAETLRHLTRPAEEILRQEGEPGLRKLPGIGERLARSIATLLITGRLPM
                     LDRLRGKSESGALLASVPGIGKSLAARLHRELGIDTLEQLESAAHDGRLIAITGIGNK
                     RVAGIIDSLSARLGRVRPIRPVHKAKEAAIAELLDVDREYREKATAGALPTIAPHRFN
                     PSRETWLPILHSNRGERHYTAMFSNTQRAHQMGKTRDWVILYYDGSDGERQSTVITSQ
                     RGALIGERIVRGRESECLEHYRQAIFHSVPADRTDQTVENPAPVAHQAAG"
     gene            2044..>3751
                     /locus_tag="VLM90_11980"
     CDS             2044..>3751
                     /locus_tag="VLM90_11980"
                     /inference="COORDINATES: protein motif:HMM:TIGR00241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008047 - enzyme activator activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydratase activase"
                     /protein_id="HSQ13737.1"
                     /translation="MKYIGINVGALTVKLAALNGADLHSTVVSHQGRPLAVLEKLLTA
                     NEFANADYFGVSGHLGQISEAAAIQRALRELKTAFDAVVSLGGESFLVYIIANGRISN
                     VLSHNKCAAGSGEFFVQQIGRMGLGMEEAIETSFDGKVVPLAARCSVHCKSDITHKLN
                     RNEASAKDILHTLHDSMASKVIALLEKGQSELRRVLLIGGVTRNAAMLAALREKLPST
                     EFLVLPESPWFEAWGSALLTRDRPQDCAPRFATQATLSHLPALSLYDDRVQIIPTPPL
                     QPPPHGPMVLGVDAGSTTTKAILLDPATNGVVASYYTRTKGDPVAATRECLRELVEHV
                     GNRSVGLVGTTGSARELAGAYLGTEHVYNEISAHAAGAAHYDADVDTIFEIGGQDSKY
                     IYLRNGVPIDYAMNNACSAGTGSFLEESAHGDLGMDVSEIADLALAAAAPVQFKATCA
                     AFINSDIRIALQEGQSRENIVAGLVYAIAGNYLNRVKGARYVGKKVFLQGGVALNRAI
                     GHAFAHSVGRQVVIPPSPELLGALGVGLLALQRAQGALGTGTDLLTLASPEMKRTSRF
                     TCG"
BASE COUNT          860 a         1128 c         1042 g          721 t
ORIGIN      
        1 acatcgcagc agccggcttt cctatcgctg cgaagaagac agcagaacct aatgtatcca
       61 ttgcgtgacc aagcgcaaaa cataccactc aattcaaccg gacatttcgc gatcggggta
      121 tgaaccccgc tcgcgaccaa agggaatgtt caaccccctt tggaaacccc agcaattttg
      181 tgcccgcagc aagctgtggg gaatattaga tcaaagtccg taatttttgc gccggtccac
      241 tattcagcga tggcatacgc tttgcctttg gatctggcca atggtgaact tatgaataaa
      301 gaacaagtgg attcgtttgc tcggctccta caccagcagc gcgatcactt cgttgaagaa
      361 ttccgtagag ctgaacaaga cttggaggcg attgccgagg agcgcgaaag cgaactggaa
      421 gaacacgccc aggaagaaca tagcgcgcga ctcttgactc ggcttgacga tcgaatgctg
      481 cacgcggtga aggatgtcga cctagcgctg caaaagaaga ggacaaggat ttgtcgcccc
      541 ggcgaaaccg acagccaatg aagaatgaag cgacaccgac ccaccggcgt acacagatga
      601 aaaacccact ggctgcgaac actgtgaatt tccgcattgc acgccgcctt gaagaagtcg
      661 cgcaaatact ggcgtcgcag ggagctaacc cgtttcgcgt gcaagcctat cgacatgcgg
      721 cggagaccct caggcacctc acccgcccgg ccgaggaaat cctccgccaa gagggtgaac
      781 cgggactgcg caagctaccc ggcatcggtg agcggctggc gcggtccatt gcaaccctat
      841 tgattaccgg aagactgccg atgctggatc ggctacgcgg caagagtgag tcgggggcat
      901 tactcgcttc cgtccccgga attggcaaaa gtctggctgc gcgactgcac cgggagcttg
      961 gcatcgatac tttggaacag cttgagtcgg ccgcacatga cggaaggtta atagcgatca
     1021 ctggcatcgg caacaaacga gtcgccggga tcatcgattc cctttcagca aggctcggcc
     1081 gcgtgcgccc gatccgaccc gtgcacaagg ccaaggaagc cgccatcgct gaactcctag
     1141 acgttgaccg cgagtaccgg gagaaggcca ccgccggcgc cttgccgacc attgcgccac
     1201 accgtttcaa tcccagtcgt gaaacgtggc tgcccatcct gcattcaaac agaggcgagc
     1261 ggcactacac ggcgatgttt tctaataccc agcgcgccca tcaaatgggc aagactagag
     1321 actgggttat tctctactac gacggctccg atggcgaacg acagtctacc gtgatcacca
     1381 gccagcgcgg tgcgctcatt ggcgagagaa ttgtgcgcgg acgggaaagc gaatgtcttg
     1441 agcactatcg acaagcgata tttcacagcg tgccggctga tcgcacggac caaacggttg
     1501 aaaatccggc gccggttgcg caccaagcgg ccggataaca ccgctgtcgt tgggacttga
     1561 tttcagcgca aaagcgaccg tctccctgtg gtcgatcccg ccccgcaact tttccgtcac
     1621 cgcctactca cgatggaata tattccacac ggtcgcagta ataatccctg ggtcaaaccc
     1681 acaggacgaa aacgacggtg atcagcaagg tcgcgatgac aaaatcgaaa gccgcaatga
     1741 tgttagagat ggtggcatgc cgcataacat tgaaaatagg caaagctgat gccgaacagc
     1801 tagcggaagg aagtcgattg ccacgtttac cccgattcga ttctaagtaa tgacaaactc
     1861 gtagcccaac tttcgctctt ctgcgaagag catttggcgc tggctgcgct cgatctagat
     1921 aatcagatcg tcaacgcaaa ttgcccaaca agttcgtggc gcatatcttg cgttattacg
     1981 cgatatgctt gacctgccgc aagatcccgg ttcaacaagg cggggagata tggacctgcg
     2041 accatgaagt atatcggcat aaatgtcggc gcattgaccg tcaaactcgc cgcgttaaac
     2101 ggtgctgatc ttcattcgac ggtagtgtcg caccaaggcc gtccgttagc cgtcctggaa
     2161 aaactcctca ccgcgaacga atttgccaac gccgattatt tcggcgtgtc tggccatctg
     2221 ggccagatct ccgaagccgc agcgattcaa cgcgccctgc gcgagctgaa aacagctttc
     2281 gatgcggtgg tttccctcgg cggcgagtcg tttctggttt acatcattgc caacggtcga
     2341 atcagcaacg tcctgtccca taacaaatgc gccgccggca gcggcgaatt cttcgtccaa
     2401 cagattggcc gcatggggct cggcatggaa gaagcgatcg agacttcgtt cgatggcaaa
     2461 gtcgtgccgc tggcggcacg ctgctcggtg cactgtaagt ccgacatcac ccataagctc
     2521 aaccgcaacg aggctagcgc caaagacatt ctacataccc tccatgacag catggcgagt
     2581 aaagtcattg ccctgctcga aaaaggccag agcgaactgc gccgcgtgct cttgatcggc
     2641 ggcgtcaccc gcaatgcggc gatgctcgcc gcgctgcgcg aaaaactgcc gtccacagaa
     2701 ttcctcgtgc tgcccgaaag tccttggttc gaagcttggg gcagcgcact gctgacacgc
     2761 gaccggccgc aggactgtgc accacggttt gccacgcagg ccacgctgag ccacctgcca
     2821 gcgctcagcc tctacgatga ccgggtacaa atcattccta cgccgccgct acaaccgccg
     2881 ccccatggcc cgatggtgct tggcgtcgac gccggatcga cgaccaccaa ggcgatactt
     2941 ctcgacccgg cgacaaatgg cgtcgtggcc tcctattaca cccgcaccaa aggcgatccg
     3001 gtcgccgcga cccgcgaatg tttgcgcgag ttggtcgagc atgtcggcaa ccgcagtgtc
     3061 ggcctggtcg gcaccaccgg ttcggcgcgc gaactcgccg gcgcctatct cggcaccgag
     3121 catgtttaca atgaaatttc ggcgcatgcc gcgggcgccg ctcactatga tgccgatgtc
     3181 gatacgatct ttgagatcgg cggccaggat tcaaagtaca tttatttacg caacggcgtt
     3241 cccatcgact acgcgatgaa caacgcctgt tccgcgggca ccgggtcgtt tcttgaagaa
     3301 agcgcccacg gcgacctcgg catggatgtt tcagaaatcg ccgacctcgc gctcgccgct
     3361 gccgcgccgg tgcagttcaa ggcgacctgc gcggcgttca tcaactccga tatccggatc
     3421 gccctgcaag agggacaatc gcgggagaac atcgtcgccg gcctggttta cgctatcgcc
     3481 ggcaattatc tcaaccgtgt caagggagcg cgctacgtcg gcaagaaagt tttcctccaa
     3541 ggcggggtcg cactcaatcg cgctatcggc catgctttcg ctcatagtgt cggccgccaa
     3601 gtcgtgattc cacctagccc ggagttgctc ggcgccctgg gtgtcggctt gctggcgctg
     3661 caaagagcgc aaggggcgtt gggaaccggg acggatcttt tgaccttggc ctccccggag
     3721 atgaaacgca ccagtcgctt tacctgcggc g
//
LOCUS       DATIRS010000946         2042 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_956344, whole genome shotgun sequence.
ACCESSION   DATIRS010000946 DATIRS010000000
VERSION     DATIRS010000946.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_956344"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1392
                     /locus_tag="VLM90_11985"
     CDS             <1..1392
                     /locus_tag="VLM90_11985"
                     /inference="COORDINATES: protein motif:HMM:NF025038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSQ13738.1"
                     /translation="GYTTDFTLIKAGSISKANGGYLVLYDREVLANAGCWEALQRVIK
                     NRELRIEEPGTFFGFVPPQGLRPEPIPTDTKVIMIGDPSLYRILATADPDFRETFKVK
                     ADFNFEVDRTQENITAFACFISDYCKREEIRHFETDGVARVIEQCARQVEDQNKLSTR
                     FSDMVDLLIESDYWAGKEKAELVSGKHVERALVEKTFRLNLVEKRLQELIAEGTVLVD
                     VTGAAVGQVNGLAVYQMGDFSFGKPSRITTKTFMGRSGIVNIEREAKMSGRSHDKGVL
                     ILGGYLGGKYAQQSPLSLSSTICFEQSYDGVDGDSASSTELYAILSSLSEMPIQQGIA
                     VTGSVNQNGEVQAIGGVNFKIEGHFDVCRLKGLTGEQGAMIPQANVHNLMLRGDVVEA
                     VKAGKFHIYSVSSIDEGIEVLTGVAAGARQADGSYPDGTINDRVQKKLQLFTELQKKL
                     TAENQEPPAAANN"
     gene            complement(1588..>2042)
                     /locus_tag="VLM90_11990"
     CDS             complement(1588..>2042)
                     /locus_tag="VLM90_11990"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HSQ13739.1"
                     /translation="PLLNSQGDVVGMITMASERGNLGFATPINLIKKILPRLVKGEKF
                     AWGWLGVQMSDITLGQARSLGIYPAKGVVVSSVLPGQPAARMGVQKQDVIVAVNDTQV
                     DSPRDVTRMVGGLEAGRMVQLSILRKGKSIHLTVPLGIKPESAKPREG"
BASE COUNT          450 a          577 c          598 g          417 t
ORIGIN      
        1 ggttacacta ctgactttac gctgatcaaa gccggttcca tcagtaaagc taacggcggt
       61 tacctggtgc tttacgaccg ggaagtcctc gccaatgccg gctgctggga agcgctgcaa
      121 cgggtcatca agaatcgcga gttgcgcatc gaggagccgg gcaccttctt tggcttcgtg
      181 ccgccccaag ggctgcggcc ggaaccgata cccaccgata ccaaagtgat catgatcggc
      241 gatccttctc tctatcgcat cctggcgacc gccgatcccg acttccgtga aacgttcaag
      301 gtaaaagccg acttcaactt tgaggtcgac cgcacccagg aaaatatcac ggcgttcgcc
      361 tgtttcatca gcgactattg caaacgggaa gagattcgcc acttcgagac cgacggtgtt
      421 gctcgggtga tcgagcagtg cgcgcgccag gtcgaggacc agaataaact atcgacccgc
      481 ttcagcgaca tggtcgatct tttgatcgag tcggattact gggcgggcaa ggagaaggcc
      541 gaactggttt ccggcaagca tgtcgagcgc gcgctggtgg aaaaaacctt tcgcctcaac
      601 ttggtcgaga agcggctgca agagctgatc gccgaaggca cggtgctggt ggatgtcacc
      661 ggcgcggcgg tcggccaggt caacggccta gcggtgtatc agatgggcga ctttagtttt
      721 ggcaagccgt cgcgtatcac gacaaagact ttcatgggcc gcagcggcat cgtcaacatc
      781 gagcgcgagg cgaagatgag cggcaggagt catgacaagg gcgtgctgat tctcggcggc
      841 tatttgggcg gcaagtacgc ccagcaaagt ccgctatcgc tctccagcac gatttgtttc
      901 gagcagtctt acgatggcgt cgacggcgac agtgcgtcgt ccactgaact ctacgcgatc
      961 ctttcaagtc tttccgaaat gccgattcag cagggcatcg ctgtcacggg ttcagtaaat
     1021 caaaacggcg aggtgcaagc gatcggcggg gtcaatttca agatcgaagg ccacttcgat
     1081 gtctgccgct taaaaggact gaccggcgaa cagggcgcga tgatccccca ggccaacgtg
     1141 cacaatctga tgctccgtgg cgacgtcgtc gaggcggtta aagccggcaa gtttcatatt
     1201 tactctgtaa gtagcattga tgaaggcatc gaagtgctca ccggcgtcgc cgccggcgcg
     1261 cgtcaagccg acggcagtta tcccgacggc accatcaacg accgggtgca aaaaaaattg
     1321 cagctgttca ccgaactgca aaaaaaattg actgcggaaa atcaagagcc accggcggcg
     1381 gcgaacaatt gatgtctcgc tcggagagag ttgagatgcc tcggtgtccg ttgtcgtgaa
     1441 cattcgtcat gccggcgcaa gcggcatcca tcccatctgc caaacctgga taccggtttc
     1501 aatggtatga cggaatcgcg agtggatctc tagttgacaa gctcagaacc cctcggcgtg
     1561 cagccgagga tcgttcagca gtctgcgcta gccttcgcgc ggcttggcgg actcaggctt
     1621 gatgccgagg ggcacggtca agtgaatcga cttgcctttg cggagtattg aaagttgcac
     1681 catgcggccg gcttccaggc cgccgaccat gcgagtcacg tcgcgcgggc tatcgacttg
     1741 agtgtcgttg accgcgacga tgacatcctg tttttgcacg cccatccgcg ccgccggttg
     1801 ccccggtaag accgagctca ccaccacgcc tttagcggga taaattccta atgatctcgc
     1861 ttggcccaga gtgatgtccg acatttgcac gccaagccag ccccaggcga acttctcacc
     1921 tttgaccaag cggggcagaa ttttcttgat taaattgatc ggcgtggcga agccgagatt
     1981 gccgcgttcg gaggccatgg tgatcatgcc gacgacatcg ccctggctat tcaacagcgg
     2041 cc
//
LOCUS       DATIRS010000947         5752 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1546866, whole genome shotgun sequence.
ACCESSION   DATIRS010000947 DATIRS010000000
VERSION     DATIRS010000947.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 5752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5752
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1546866"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1064
                     /locus_tag="VLM90_11995"
     CDS             <1..1064
                     /locus_tag="VLM90_11995"
                     /inference="COORDINATES: protein motif:HMM:NF025112.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HSQ13740.1"
                     /translation="RHDGPYLDGRRPSTVRYGTLAEDIHRRDFTINGMVYDPIADRVI
                     DLVGGQEDLRRGLVRAIGDPQARLEEDRLRMIRAVRFAASLKFAIDPPTFAAIQNLAP
                     SIAVISGERIGEEITRILTEGGARRGFELLDESGLLKIVLPEIVAMKGTAQTPDFHPE
                     GDVFTHTMLLLSHLENPSETLAYGCLLHDVAKPRCIRQEAQRITFYGHTEQGAEMAEE
                     ILKRLKRGRAVWERVAYLVRNHLRQVQAPQMRLSTLKRFLREDGIDELLELARIDALS
                     SNGDLSYYRFCQERRDELKDEEIRPEPLVRGGDLIELGFNPGPQFKEILRQVEDAQLG
                     GELHSRADAIEWIKAKFNN"
     gene            1074..3377
                     /locus_tag="VLM90_12000"
     CDS             1074..3377
                     /locus_tag="VLM90_12000"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSQ13741.1"
                     /translation="MKKAQSYKVIGKAELRNDGAEKVTGKALYTVDVDLPGMAHGKIL
                     RSPYAHARLVRVDGSKAEMLPGVLAVITREDQKRLRMFGAAYKDQTIVAVDKVRYVGD
                     PVAAVAAVDETTAARALELIEVEYEDLPAVTSIDEALAANAPLVHEAPASGGELMGQR
                     YETPKEFSGSNFCYRFSYANGDVEAGFKNADHVFENTFTFPRVQHFSMEPHATVADFA
                     GDRLTLWAGTQEPFTLREHLADIFHLPQSRIRVIVPYVGGGYGGKLAVKTEPLAAVLS
                     WKAKRPVRLAHTIEESFKTVTRHPARVRIKTGVNKDGKLVARQCLIHMETGAYADAGP
                     RVTQKAGYRCFGPYRIPHMKTDAYTIYTNTVPAGAYRGFGTLQVTWAYESQMDIIADK
                     LGFDALEFRIKNLLKKGDLYTPGDTPVDCDLKAGLLQAAEEIGWKQQITKPNRGRGLA
                     VYMKDGGGTYKVSSAAVKMNADGSVVLLTGTVEVGQGARTALSQVCAEELGIPFEAVT
                     VAQLDTEITPYDVNTNASSSMVVMGLSVQRAAQDLKRQIVRHAAKLLKTKAAQLQLSG
                     GKIVGPKNETLSFVELMQKIFMSRSGELVGHGAYQSLKSAKAALGSPTNFWEIAWGAA
                     EVEVDRDTGEIKLLKYVSLADVGRAIHPVLCEGQDEGGVVNAIGHSLMEEMVYKDGQL
                     LNPNLVDYRVPSFNSLPKDFETILVESHNGPGPFGAKGTGEGGLMPVAAAIGNAVYRA
                     TGLRMYDLPLTPEKVWRGLAARAQKVE"
     gene            complement(3464..5491)
                     /locus_tag="VLM90_12005"
     CDS             complement(3464..5491)
                     /locus_tag="VLM90_12005"
                     /inference="COORDINATES: protein motif:HMM:NF014073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HSQ13742.1"
                     /translation="MELVSALFSGLLQVFNWSTFSLMMVGIAVGFVVGILPGLGGPTA
                     MALMLPFVFKMNAVEAFAFLLGMTAVTATTGDITSVLFGVPGEPTTASTIVDGHAMSR
                     NGEAGRALGAVLMSSLVGAVFAGFALGAAVPVIRPLVLSFGSPEFFMLAILGISFVAA
                     LSGEDPIKGIIAGGIGLMLATIGLDPISGIQRYTFGHLFLWDGIGLVPITIGFYAIPE
                     TIELAVLGSSIAKKEVGELGGVMEGVKDTFRHFWLVIRCSALGTVIAIIPGMGAATTQ
                     WLAYAHAVQSSPNKERFGKGDVRGVLGPGAANNSTLGGSLITTIAFGVPASVVMAILL
                     GAFIIQGIVPGPDMLLPPPKGKLDLTFSFVWVIIISNIITVAICFLFLKPLAKVTQVR
                     GGIIIPIILVLIYLGAFAEKNAFEDMVIVLAFGALGWIMEKLDWPRPPVLLGLVLGPL
                     SENRLFLSTDNYGLAWTHRPGVIGIFIVTLIGIFYPMYKNRREARARASAPGNGNGLA
                     DTPRHGGLQFGNATMFTGALILILALALWQSRNFGYRAGLFPWVIGIPTFVLCFLQLA
                     RDLRGTHKKAAAHLGEEPEVEITREVVSQRTIAVIAWTLGFFVAIWLLGFSIAVPLMI
                     LLYLKVAGKESWLMTAQVTFFSWLFYWGLFEKLLNVPFPEGLLIGLFKGPQ"
BASE COUNT         1279 a         1612 c         1771 g         1090 t
ORIGIN      
        1 tccgtcacga cggcccgtat ctcgacggcc gccggccgag tacggtgcgc tacggcactt
       61 tggcggagga cattcaccgg cgcgacttta cgatcaacgg catggtctac gatccgatcg
      121 cagatcgagt catcgatttg gtcggcgggc aagaggatct tcggcgcggc ttggttcgcg
      181 ccatcggcga cccccaagcg cgcctggagg aagaccgctt gcgcatgatc cgcgcggtgc
      241 ggtttgccgc cagtctgaaa ttcgctatcg acccaccgac atttgccgcg atacaaaact
      301 tggcgcctag catcgcagtg atttctgggg aacgaatcgg cgaggaaatt acccgcatct
      361 tgaccgaagg tggcgccagg cgcggctttg agctgttgga cgaaagcggt ttgctgaaaa
      421 ttgtcttgcc ggagatcgtc gccatgaagg gcaccgcgca gacgccagac tttcatcccg
      481 agggcgatgt attcacgcat accatgctgc tactcagcca tttggaaaat cctagcgaaa
      541 ctttggctta cggttgtctg ctccatgatg tcgccaagcc tcgctgtatt cgccaggaag
      601 cgcagcgcat cactttttac ggccacaccg aacagggcgc tgagatggcc gaggaaattc
      661 ttaaaaggct caagcgcggc cgcgcggtgt gggagcgagt tgcctatctg gtgcgcaatc
      721 acctgcgcca ggtgcaggcg ccgcagatgc gcttgagcac gttgaagcgt tttcttcgcg
      781 aggacggcat cgatgagtta cttgagttgg cgcgcatcga cgcgttgtcg tccaatggcg
      841 acttgagtta ttatcgcttc tgccaagagc gtcgcgacga gttgaaggac gaagaaattc
      901 gtcccgagcc gctggtgcgc ggcggcgact tgatcgaact gggattcaat ccggggccgc
      961 aattcaaaga aatcttgcgc caggtcgaag acgcgcagtt gggcggtgaa ttgcacagcc
     1021 gcgcggacgc gatcgaatgg atcaaggcaa agtttaacaa ctgaggtcgg tgcatgaaga
     1081 aagctcaatc ctacaaggtc atcggcaaag cggaactgcg caacgacggc gccgagaaag
     1141 taaccgggaa agcgctttat accgtcgatg tcgatctgcc cggaatggcc catggcaaga
     1201 tcctgcgcag tccctacgcc catgcgcggc tggtgcgcgt cgatggcagc aaagctgaaa
     1261 tgttgccggg agtgctcgcg gtaatcacgc gcgaagatca aaaaagactg cgaatgttcg
     1321 gcgccgctta caaagatcaa accatcgttg ccgtcgacaa ggtgcgctac gttggcgatc
     1381 cggtggcggc ggtggcggcg gtagacgaaa cgacggcggc gcgagccttg gaactgatcg
     1441 aggtcgagta cgaagatttg cccgccgtga ccagtatcga tgaggccctg gcggcaaacg
     1501 cgccgctggt gcacgaggcg ccggccagcg gcggcgagct catggggcag cgctacgaaa
     1561 cgccgaaaga gttcagcggc agtaatttct gctatcgttt cagttatgcc aacggcgatg
     1621 tcgaggccgg ctttaaaaat gccgatcatg tttttgaaaa cacttttacc tttccgcggg
     1681 tgcagcattt ctccatggag ccgcatgcga ccgtggccga tttcgccggc gaccgcttga
     1741 cgctctgggc cggcactcag gagccgttca cgctgcgcga acatctggcg gatatttttc
     1801 atctgccgca gagcaggatt cgcgtcatcg tgccctacgt cggcggcggc tatggtggca
     1861 aactggcggt gaagaccgag ccgttggccg cggtgttgtc gtggaaggcc aagcggccgg
     1921 tgcgtttggc gcatacgatc gaagagagtt tcaagaccgt cacgcgccat ccggcgcggg
     1981 tgcggattaa gaccggcgtg aacaaggatg gcaaactggt ggcgcgccaa tgtctgatcc
     2041 acatggaaac cggcgcctat gccgacgccg gtccgcgggt gacgcagaag gcgggctacc
     2101 gctgcttcgg gccttatcgc atcccgcata tgaagaccga cgcatacacc atttatacga
     2161 acaccgtgcc ggcgggcgcc taccgcggtt tcggcacgct gcaagtcacc tgggcttatg
     2221 agtcgcagat ggatatcatc gccgacaagt tgggcttcga tgccctcgaa ttccgcatca
     2281 agaatctgct caaaaaaggc gacctataca cgccggggga tacgccggtg gactgcgatc
     2341 tcaaagcggg tctgctgcaa gccgccgagg aaatcggctg gaagcaacag attaccaaac
     2401 ccaatcgcgg ccgcggcctg gcggtgtaca tgaaagacgg cggcggcacc tacaaagtct
     2461 cgtccgcggc ggtgaagatg aatgccgacg gcagcgtagt gctgcttacc ggcaccgtcg
     2521 aagtcggcca gggggcgcgc acggccttga gccaagtgtg cgccgaggag ttgggtattc
     2581 ctttcgaagc cgtcaccgtg gcgcaactgg ataccgagat cacgccctac gatgtcaata
     2641 ccaacgccag cagctcgatg gtcgtgatgg gcttgtcggt gcagcgcgcg gcgcaggatt
     2701 tgaagcggca gattgtccgc catgccgcca agcttctcaa aaccaaagcg gcacagctgc
     2761 agctcagcgg cggcaagatt gtcgggccga agaatgaaac tctgtcattt gtcgagctca
     2821 tgcagaaaat tttcatgtcg cgttccggcg agctcgtcgg ccacggcgcc tatcagtcgc
     2881 tcaagagcgc caaagctgct ctaggctcgc cgaccaattt ctgggagatc gcctggggcg
     2941 cggcggaagt ggaagtcgat cgcgacaccg gcgagatcaa gttgctcaaa tatgtttcct
     3001 tagccgatgt cggccgggcg attcatccgg tgttgtgcga ggggcaggac gaaggcggcg
     3061 tcgtgaacgc catcggccat agtctgatgg aagagatggt ctataaggat ggccagttgc
     3121 taaaccccaa cctggtcgac taccgcgtgc cgagtttcaa tagcttgccc aaggatttcg
     3181 aaaccattct ggtcgagagt cacaatggac cggggccgtt cggtgccaag ggcacgggcg
     3241 agggcggttt aatgccggtg gctgcggcca tcggcaatgc ggtttatcgc gctaccggat
     3301 tacgcatgta cgacctgccg ctaacaccag agaaagtttg gcgcggcctg gcggcccgcg
     3361 ctcagaaggt cgagtgagaa cccagaggtc aaaattcaga agtcggaagt cagcacccga
     3421 ttcgattaga ctgccgacct ctgacctccg ataaccatca cccctactgc gggcctttga
     3481 agagaccgat cagcagccct tcggggaacg gcacgttcag tagcttttcg aataatcccc
     3541 agtaaaacag ccaggagaaa aaggttacct gtgccgtcat cagccagctc tctttgccgg
     3601 ctactttcaa atacagcagg atcatcagcg gcacggcgat ggaaaagccc aggagccaga
     3661 tggcgacgaa aaagccgagg gtccaggcga tcaccgcgat ggttctttga ctgaccactt
     3721 cccgggtgat ttcaacctcg ggttcttcac cgaggtgtgc cgcggccttt ttatgtgtgc
     3781 cgcgcagatc tcgcgccaac tgcaagaaac aaaggacaaa cgtcggtatg ccgatgaccc
     3841 agggaaacag gccggcgcgg taaccgaagt tgcggctctg ccagagcgca agtgcgagta
     3901 tcaggatcag cgcgccagtg aacatcgttg cgttgccgaa ttgcagcccg ccatgccgcg
     3961 gtgtgtccgc taatccattg ccgttgcctg gcgccgacgc tcttgctcgc gcttccctgc
     4021 ggttcttata catcggataa aaaatcccga tcaacgtcac gataaatatg ccgatgactc
     4081 ccggacggtg agtccacgcc aagccgtaat tatccgtcga caggaacaaa cggttttccg
     4141 acagcggtcc gagaaccagt cctaacagca ccggcggccg cggccaatcg agtttctcca
     4201 tgatccagcc gagggcaccg aaagccagaa caatcaccat atcttcgaaa gcgttttttt
     4261 cggcgaatgc gccaagataa atcaacacga ggatgatcgg gatgatgatg ccgccgcgca
     4321 cctgggtgac tttcgccagc ggctttagga agagaaagca aatcgccacc gtgatgatgt
     4381 tggagatgat gatgacccag acaaacgaaa aggtcaggtc gagtttgccc ttgggcggcg
     4441 gcagcagcat gtcggggccg gggacgatgc cttgaatgat gaaggcgccg agcaggatcg
     4501 ccatgaccac gctggcgggg acgccgaagg cgatggtcgt gatcaagctg ccgccgaggg
     4561 tcgaattatt cgccgcgccg ggtcctaaca cgccgcgcac gtcgcctttg ccgaagcgtt
     4621 ctttgttggg cgagctttgc accgcgtggg cgtaggctaa ccactgagta gtcgccgcgc
     4681 ccatgccggg aatgatcgcg atgaccgtgc cgagagcgct gcagcgaatc accagccaaa
     4741 aatggcgaaa ggtatccttg acgccttcca tgacgccgcc gagctcgccg acttctttct
     4801 tggcgatgct actgcccagg acggcgagtt ctatggtttc gggaatggcg tagaatccga
     4861 tcgtgatcgg cactaagccg atgccgtccc aaagaaaaag gtggccgaag gtgtaacgtt
     4921 ggatgcccga gatcggatcg aggccgatgg ttgccagcat caatccgatg ccgcccgcga
     4981 tgatgccttt tatcgggtct tcaccgctca atgccgcgac gaacgatatg ccgaggatcg
     5041 ccagcatgaa aaattccggt gaaccgaagg agagcaccag gggccggatg accggcacgg
     5101 cggcgccaag cgcgaagccg gcaaagactg cgccgaccag agaactcatc agcacagcgc
     5161 cgagggcgcg ccccgcctcg ccgttgcgcg acatggcgtg gccgtcgaca atggtcgacg
     5221 cggtcgttgg ctcgccgggg acgccgaaca agaccgaggt gatgtcgccg gtggtggcgg
     5281 tgaccgccgt catgccgagc agaaaagcga aggcttcgac ggcattcatc ttaaagacga
     5341 acggcaacat cagcgccatc gctgtgggcc cgcccaagcc gggaaggatg ccgacgacga
     5401 agccgacggc gatgcccacc atcatcaaac tgaatgtcga ccagttgaaa acctgtagga
     5461 gtccggaaaa cagcgcggat accaattcca taaatacgca aatcctctgc aaacaaccgc
     5521 taaatgttgg tcgtcaatat caatgtccag gggaattgta aagaacatct tcgctctcga
     5581 tcggaccggg tttgaatctc gatcgccggt aaattttacg ttgtgttcat cgttgtggcc
     5641 ctttagaatg ctcgtgtcgg atcggtcagg cttgtggttg caggagaatg gttatggcgc
     5701 agcaaggtaa aaattttatc gacggaaagt ggcaggcggc cggttccggt aa
//
LOCUS       DATIRS010000948         2221 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1841776, whole genome shotgun sequence.
ACCESSION   DATIRS010000948 DATIRS010000000
VERSION     DATIRS010000948.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2221
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1841776"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..699
                     /gene="xseA"
                     /locus_tag="VLM90_12010"
     CDS             <1..699
                     /gene="xseA"
                     /locus_tag="VLM90_12010"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HSQ13743.1"
                     /translation="VIIRPVKVQGEGAAREIAEAIADLNRFGEVDVMIVGRGGGSLED
                     LWAFNEDVVARAIFASSVPVVSAVGHEVDFTIADFVADWRAPTPTAAAEMVAPRKEDL
                     LEQVQTLGSQLLRNVQLKLFLLQDVCRGLAKRLADPGRKLRENQQRVDELSVDLLRRF
                     QERVRQSKDQLAEVSGRLGALSPLAVLERGYSITHKLPAEQIVKSAASLEIGDVVRIT
                     FAQGKSHCRVEGKE"
     gene            701..1618
                     /locus_tag="VLM90_12015"
     CDS             701..1618
                     /locus_tag="VLM90_12015"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HSQ13744.1"
                     /translation="MKALGLLISILLVSAMPAHGAGAAKSSRPKTVEMFQGEVVEVKV
                     SGDDLVAVEGRMVPEKIYFYPNGADGFSAIVGADVEAKPGPVKLLLKLISRAGTHSQR
                     EIPFKIKAKAFRRESFNVPPGFDQMSPEALEEIRRERELFARAFAAPAPERLWEAPFL
                     RPVPHEASASSFGSRRIINGTPRAPHSGTDLSSPAGTEVVATNHGRVVLVGNFFFAGG
                     SLVLDHGGGLFTMYFHLSEFKVEEGALVKKGDVLALSGATGRVTGAHLHWGARLANAR
                     IDPLELLSKVPAGSENSREVKTITNKTEK"
     gene            1620..1883
                     /locus_tag="VLM90_12020"
     CDS             1620..1883
                     /locus_tag="VLM90_12020"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: protein motif:HMM:NF002140.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HSQ13745.1"
                     /translation="MTRKDASGKKLESALEDLEQVVEQLESGELSLEDSLAAFEKGVG
                     LVKFCNQKLNEVERKIELLVKDKEGKLQLKAFEELPERGEEDD"
BASE COUNT          483 a          586 c          708 g          444 t
ORIGIN      
        1 gtgatcattc gaccggtgaa ggtccagggc gagggcgcgg cgcgggaaat cgccgaagcc
       61 atcgccgacc tgaatcgctt cggcgaggtc gacgtcatga tcgtcggacg cggtggcggc
      121 tcgctggaag atctatgggc gtttaatgaa gacgtggtcg cgcgcgctat cttcgcttcg
      181 agcgttccgg tcgtttcagc ggtgggccat gaggtcgatt ttaccattgc tgatttcgtc
      241 gccgactggc gcgcgccgac gcccacggcc gcggcggaaa tggtcgcgcc gcgcaaagag
      301 gatctgctcg agcaggtcca aaccctcggc agtcagttgc tgcgcaacgt gcaattgaaa
      361 ttatttctgt tgcaggacgt ctgccgcggt ctggcaaaaa ggctcgccga tccgggccgc
      421 aagctcagag aaaaccagca gcgcgtggac gagctgtcgg tggatctgct ccgccggttt
      481 caggaacgcg tgcgccaatc taaagatcaa ttggcggaag tctcggggcg gctcggtgcg
      541 ttgagcccgc tcgccgtgct cgagcgcggt tacagcatca cgcataaact gcccgcagaa
      601 cagatcgtca aaagcgccgc atcgttagag atcggcgatg tcgtgcgcat tacctttgcg
      661 cagggaaaat cgcattgccg cgtcgaaggc aaggagtgag atgaaagcgc tgggtttgct
      721 gatctcgatc ctgttggtta gcgccatgcc ggcgcatgga gccggcgcgg caaagagcag
      781 tcggcctaag acggtggaaa tgttccaggg cgaagtcgtc gaagtgaagg tatcgggcga
      841 cgatctcgtt gcggtcgaag ggcgtatggt cccggagaaa atctattttt acccgaatgg
      901 cgcggatggt ttcagcgcga tcgtcggcgc cgacgtcgaa gcgaagccgg ggccggtgaa
      961 gcttctttta aaacttatca gccgcgccgg cactcacagc cagcgcgaga tcccgttcaa
     1021 gataaaagcc aaagcgttcc gcagagaatc cttcaacgtg ccgccgggct tcgaccagat
     1081 gagcccggaa gcccttgagg aaattcgccg ggagcgagag ttgttcgcgc gcgccttcgc
     1141 ggcgccggca ccggaacggc tttgggaagc gcctttcctt cgccccgtgc cccatgaggc
     1201 ctcggcgtcc tccttcggat cgcgccgcat catcaacggc acgccgcgcg ccccgcatag
     1261 cggcaccgat ctgtcgtcac cggcgggaac cgaagtggtc gcgactaatc atggccgcgt
     1321 cgtcctagtg gggaattttt tcttcgccgg ggggagcctg gtgttggatc acggcggcgg
     1381 gctgttcacc atgtatttcc atttgtccga gtttaaggtc gaagaaggcg cgctagtcaa
     1441 aaagggcgat gtgctcgcgt tatcaggggc taccgggcga gtgacgggag cgcatcttca
     1501 ctggggcgca cggctggcca acgccaggat cgatccgttg gagttgctct ccaaagtgcc
     1561 agccggctcg gaaaatagcc gagaagtaaa aacgatcacg aacaagacgg agaagtaaca
     1621 tgacgcgcaa agacgcttcc ggtaaaaaac tcgaatcggc tctcgaagat ctagagcagg
     1681 ttgtcgagca gttggaatcc ggtgaactgt ccttggaaga ttccctcgcc gcgttcgaga
     1741 agggcgtcgg cttggtgaag ttttgcaacc aaaagctcaa cgaagtcgaa aggaaaatcg
     1801 aactgctggt gaaggacaag gaaggcaagc tgcaactcaa ggcgttcgag gaactgccgg
     1861 aacggggaga ggaagacgac tgatgcgggc aggttgaaca ggagactgat tcgcttgtcc
     1921 ggggcgatcg cctcttgaaa cacctgtaga tatctttctc ctttccattc gacgtttgga
     1981 aacttgcaga taagtggaag ttcccgcctg agtttgatta atcgtaaacg attgtaacgg
     2041 agcgcggcga ttgaacgact tgaacgattt gaatgggctt cagtagtggg tgcgcgcagc
     2101 gttccaattc ggggtcccct tgctagagcg cttttcgacc tatatataga gtcatcgtag
     2161 attcttcgtt catcttaaag gcgcgtaaga ggagatagaa agccgggccg caccaatgca
     2221 a
//
LOCUS       DATIRS010000949         1674 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1055545, whole genome shotgun sequence.
ACCESSION   DATIRS010000949 DATIRS010000000
VERSION     DATIRS010000949.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1674
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1055545"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..243
                     /locus_tag="VLM90_12025"
     CDS             <1..243
                     /locus_tag="VLM90_12025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13746.1"
                     /translation="GVVPLVTLAKALSHLPAVVWDSRSIARLRQGQQEALSQLRLPAK
                     GASLLSILDQAGELVALVRWTEDLPGSRWRLYRVFH"
     gene            407..>1674
                     /locus_tag="VLM90_12030"
     CDS             407..>1674
                     /locus_tag="VLM90_12030"
                     /EC_number="4.1.1.32"
                     /inference="COORDINATES: protein motif:HMM:NF003253.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004611 - phosphoenolpyruvate
                     carboxykinase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0017076 - purine nucleotide binding
                     [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (GTP)"
                     /protein_id="HSQ13747.1"
                     /translation="MSNVTGTVPANSHIQNWVNSVAAMCQPESVYWCDGSEEEREQLT
                     KIAVQCGDLLPLNQKEMPGCYLHRSAQNDVARTENLTFVCTDEQEEAGPNNNWMAPAE
                     SYDKLGKIFAGSMRGRTLYVIPFLMGPAGSSFSKVGVQVTDSVYVVLNMRLMTRMGKV
                     ALNHLGNSDDFTRCLHSKADLDIERRFICHYPQDNTVWSVGSGYGGNALLAKKCLSLR
                     IASKLGQQEGWMAEHMLIVGVESPDGEITYVCGAFPSACGKTNMAMLVPPASMKGWKI
                     HTVGDDISWLRVGSDGRLWAINPEAGFFGVAPGTGSNTNPNAVKTVKKDTIFTNVALR
                     DDGTVWWEGHDDPVPANAQDWRGKPWDPEGGTPAAHPNARFTVSIKQCPTYSPEWEKP
                     EGVPISAILFGARRQKLIPLVYQSFNWQHGT"
BASE COUNT          354 a          457 c          520 g          343 t
ORIGIN      
        1 ggtgtcgtgc cgctggtcac gttggcgaaa gccttgagcc atctgccggc ggtggtttgg
       61 gacagccggt cgatcgcccg cttgcgccag gggcagcagg aagccttgtc gcagctaaga
      121 cttccggcaa agggcgcgtc actactgtcg attctcgatc aagccggcga gctggttgcg
      181 ctggtgcgat ggaccgagga tttgcccggc tcccgctggc gactgtaccg ggtttttcat
      241 tgaagttttg gcgcgccgac gggaacggtt tattgacatc aaccgggcca atcagatacc
      301 ctacgaaccc tattgaacgt taacgatatc gctgtcttgg acagcggttg cgaggctgat
      361 tcacaaacct cgccagcgca tttcggaaag gaagcagcta tcacccatga gtaacgttac
      421 tggaacggtg ccggcaaatt cacatattca aaattgggtt aacagcgtgg cggcgatgtg
      481 ccagcccgag agcgtctact ggtgcgatgg ttcggaagaa gaaagagagc agctgaccaa
      541 gatcgccgtg cagtgcggcg atctgttgcc gctcaatcag aaggaaatgc caggttgtta
      601 cctgcaccgc agcgcgcaga acgatgtggc gcgcacggag aatttgactt tcgtttgtac
      661 cgacgagcag gaagaggccg gtcccaacaa taactggatg gcgccggcgg agtcctacga
      721 caagctcggc aagatcttcg ccggctcgat gcgcgggcgg acgctttacg tcattccttt
      781 tctcatgggg ccggcgggat cgagtttcag caaagtcggt gtccaggtga ccgatagcgt
      841 ctatgtagtg cttaacatgc ggctgatgac gcgcatgggc aaagtcgctt tgaatcatct
      901 cggcaactcg gacgatttta cccgctgcct ccattccaag gcggatctcg atattgagcg
      961 ccgtttcatc tgccattacc ctcaagacaa cacggtatgg agtgtcggct cgggatatgg
     1021 cggtaacgcc ttgctggcga aaaaatgttt gtctctgcga atcgccagca agttaggcca
     1081 acaagaaggc tggatggccg agcatatgct gatcgtcggc gtggaaagtc ccgacggcga
     1141 gatcacctat gtgtgcggcg cttttccgag tgcctgcggt aagaccaata tggcgatgtt
     1201 ggtgccgccg gcgagcatga agggttggaa gattcacacc gtcggcgacg acatctcttg
     1261 gttgcgggtt ggctccgacg gcagactctg ggcgatcaat ccggaggcgg gatttttcgg
     1321 cgtcgcgccg gggactggct cgaataccaa ccccaacgcc gtgaagacgg ttaagaagga
     1381 caccatcttc accaacgtgg cgctgcgcga cgacggtacg gtgtggtggg aaggccacga
     1441 cgatccggtg ccggccaacg cgcaagattg gcgcggcaag ccctgggatc ccgagggcgg
     1501 caccccggca gcacacccca atgcgcgctt tacggtatcg atcaaacagt gtcccaccta
     1561 ttcgccggag tgggaaaagc ccgaaggcgt gccgatcagc gcgattcttt tcggcgcgcg
     1621 ccggcagaaa ctcattcctt tggtctacca atccttcaat tggcagcatg gcac
//
LOCUS       DATIRS010000950         1596 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1055617, whole genome shotgun sequence.
ACCESSION   DATIRS010000950 DATIRS010000000
VERSION     DATIRS010000950.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1596
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1055617"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..750
                     /locus_tag="VLM90_12035"
     CDS             <1..750
                     /locus_tag="VLM90_12035"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ13748.1"
                     /translation="AHWILPEVREAKNWWGGHQWTDNSKRFAYSPFAFMQDNLWYNSA
                     LVKTEEIRLYDDLLLPKWKGKIGLWDPRQGGASAGKWAFLWATKGEGYLKKLIDQVGV
                     IASERKPVTDALAKGSIALSIGPTYYSFVTYTKAGLPVKPLPPIKEGTYVSMGNGGPV
                     MIKNAPHPNAAKVFVNWLLSKEGQEIYSKAQGQATRRLDVDTKAMEEFGIRAAKDHIN
                     VEDYHKHENQSENKLKSVRRPAQEFAKKILP"
     gene            complement(784..>1596)
                     /locus_tag="VLM90_12040"
     CDS             complement(784..>1596)
                     /locus_tag="VLM90_12040"
                     /inference="COORDINATES: protein motif:HMM:NF015214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase C-terminal
                     domain-containing protein"
                     /protein_id="HSQ13749.1"
                     /translation="CVVPNGAPGLKLFPRRPYALGVFSLFDYPLSSRFDESDALVVFD
                     DVFVPWDDIFIYKNIELTAGQFSATAAHVLGNTQSHIRSLAKLQFLVGLVKRCMDLSG
                     RAAASEIVAQLGDLATRVSIVEGMILGAEAAAEPDQFGVMRPKDSLLYASQVYQQAMY
                     PALLNQIRGLLGGSLIQLPASVDELRAPASAADIERYVRWPHAGAVERVKLLKLLWDA
                     VGSEFASRHLQYEMFYAGGSPAIQLREFRNFDWAAAEQLVDQCLAGYDMDSR"
BASE COUNT          395 a          491 c          440 g          270 t
ORIGIN      
        1 gcgcactgga tcttgcccga agtgagagag gcgaaaaatt ggtggggcgg ccatcaatgg
       61 accgataaca gcaagcgatt cgcctattcg ccgttcgcct tcatgcagga caatctttgg
      121 tacaattcgg ccttggtcaa aaccgaagag attcgtctct acgacgattt gctactgccg
      181 aagtggaaag gcaagatcgg cctgtgggac ccgcgccagg gcggcgcctc ggctggcaag
      241 tgggcctttc tctgggccac caaaggcgaa ggttacttga agaaactcat cgaccaggtt
      301 ggcgtcatcg ccagcgagcg caaaccggtc accgacgctc tggccaaggg cagtatcgct
      361 ctcagtatcg gcccgaccta ttacagcttc gtaacctata caaaagcagg attgccggtg
      421 aagccgttgc cgccgatcaa agaaggcacc tatgtttcca tgggcaacgg cggcccggtg
      481 atgatcaaaa acgcccccca tccaaacgcc gccaaagttt tcgtcaactg gctgttgagc
      541 aaagaagggc aagaaattta ttccaaagcc caaggccaag cgacgcgaag gctcgacgtc
      601 gataccaagg cgatggaaga gttcggtatc cgcgccgcta aggatcacat caacgtcgag
      661 gactaccaca aacatgaaaa tcaaagcgag aacaaactaa aatccgtgcg ccgcccagcc
      721 caagaattcg ccaagaaaat attgccgtag cgtccgacgg gcggaaccct ttagcgatca
      781 cagtcaccgg ctatccatgt catagcccgc caaacactga tcgaccaact gctcggcggc
      841 ggcccaatcg aagttgcgaa attcgcgcag ctggatcgcc ggcgaaccgc cggcgtaaaa
      901 catttcgtac tgcagatggc gcgaagcgaa ttccgagccg accgcatccc acaacagttt
      961 caataatttt acccgttcga ctgcgcccgc gtgcggccag cgcacataac gctcgatatc
     1021 cgccgccgaa gcgggcgcgc gcagctcgtc cacgctcgcc ggcagctgga tcaaactgcc
     1081 gccgagaagc ccgcggatct gattgagcaa cgccggatac atcgcttgct ggtagacctg
     1141 actggcgtag agcagcgagt ctttgggccg catcacgccg aactggtcgg gctcggcggc
     1201 cgcctcggcg ccgagaatca tgccctcgac tatcgacacc cgcgtcgcca ggtcgcccaa
     1261 ttgcgcgacg atctcgctcg ccgccgcgcg cccgctcaaa tccatgcagc gcttcaccag
     1321 cccgacgaga aactgcaact tggccaaaga gcgaatatgc gactgggtgt tgcccaagac
     1381 atgcgctgcg gtcgcgctga actgcccggc ggtcagctca atatttttgt agataaaaat
     1441 atcgtcccaa gggacaaaaa catcgtcgaa caccaccagc gcatcactct cgtcaaaccg
     1501 gctcgacagc ggatagtcga acaagctgaa gacgccgagg gcatagggcc ggcgcggaaa
     1561 gagcttcaga cccggtgcgc cgttgggcac gacaca
//
LOCUS       DATIRS010000951         1594 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_760571, whole genome shotgun sequence.
ACCESSION   DATIRS010000951 DATIRS010000000
VERSION     DATIRS010000951.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1594
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_760571"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1464
                     /locus_tag="VLM90_12045"
     CDS             <1..1464
                     /locus_tag="VLM90_12045"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13750.1"
                     /translation="GTCEPQHGVTSIIMGNCGLALAPVKSGDEDAIVKSFVRVEAIPR
                     VALEKGVPWGWKSYGDYLNKLEGNVGINVGGIVGHIAVRQFVMGEESTERKATEGEVD
                     KMRQAVGEAMGAGAFGLSTNRNERHMREDGLPVPSRLADDNELFALCEVVSASNSGVI
                     QMNMGRHCVEQIPQYDALARRVGRPIVWQSVQYKESEPELWQNMLGGIAKTFEAGYQA
                     YGLTHTVPLMRHFSMKDAQIFDEFPVWKNLMFLPEAARKQAFADPATRQKMRDDMDEP
                     RPVSYHRNWGRVFVERVSKAENQKYHGKSVAEVATLRKQDALDAFLDLSLEEDLETVF
                     ETTNRGFNPEAMSTIMKSPYVVIGTSDAGAHVQFGADFGYCTTLLGMWVRDRQMISLE
                     QAIHKLTFHVASIWGIEGRGLLRPGFAADVTVFDPKTIKACAPEWAEDYPAATKRLIQ
                     RSEGVHYTIVNGKVIFDQGRLSGEMAGSVLRSAAHQG"
BASE COUNT          356 a          421 c          512 g          305 t
ORIGIN      
        1 ggcacttgcg agccgcagca tggcgtgact tcgatcatca tgggaaactg cggtctggcg
       61 ctggcgccgg taaaaagcgg cgacgaggac gccatcgtta aaagttttgt ccgtgtcgag
      121 gcgatcccgc gcgtcgcgct agagaaaggc gtgccttggg ggtggaaatc ctacggcgat
      181 tatttgaaca agctcgaagg caacgtcggc atcaacgtcg gcggcatcgt cggccatatc
      241 gccgtgcgcc aatttgtcat gggtgaagag tcgaccgaac gcaaggcgac agagggcgag
      301 gtcgacaaaa tgcgccaggc ggtgggcgaa gcgatgggtg ccggcgcgtt cggtctatcg
      361 accaaccgca acgagcgcca tatgcgcgag gacggcctgc cggtgccgag ccggttggcc
      421 gacgataacg agctgttcgc tctgtgtgaa gtggtcagcg cgtccaatag cggtgtgatt
      481 caaatgaaca tggggaggca ttgcgtcgaa cagattccgc agtacgacgc gctggcgcgg
      541 cgcgttggcc ggccgatcgt gtggcagagc gtgcagtata aagagagcga gcccgagcta
      601 tggcagaaca tgctcggcgg catcgccaag acattcgaag ccgggtacca agcctacggc
      661 ttgacacata cggtgccgct gatgcgtcac ttcagcatga aggacgcgca gatcttcgat
      721 gaatttcccg tttggaaaaa cttgatgttc ttgccggagg cggcgcgcaa gcaagcgttc
      781 gccgatccag cgacccggca aaagatgcgc gacgatatgg acgaaccgcg gccggtgtcg
      841 tatcaccgca actggggccg ggtgtttgtc gagagagtta gcaaagcgga aaatcaaaaa
      901 tatcatggca aaagtgtcgc ggaagtcgcc acgctacgca agcaagacgc gctcgatgcc
      961 ttcctggatc tatcgctgga agaagatctg gagactgtgt tcgagaccac caaccgcggc
     1021 ttcaacccgg aagcgatgag cacgatcatg aagagtccct atgtggtcat cggcacttcc
     1081 gatgccggcg cccatgtcca gtttggcgcc gacttcggtt actgcaccac gctgctcggc
     1141 atgtgggtgc gcgaccggca aatgatttca ttggagcagg cgatccataa gctgaccttt
     1201 catgttgcgt cgatttgggg catcgaaggg cgcggcctct tgcgtccagg ttttgccgcc
     1261 gacgtaacgg tattcgatcc caagacgatc aaagcctgcg cgccggaatg ggccgaagat
     1321 tatccagcgg cgaccaagcg cttgatccag cgctccgaag gcgtccatta caccatcgtc
     1381 aacggcaagg tgatttttga ccagggcagg ctgagcggtg agatggcggg aagcgtgctg
     1441 cgcagcgcgg cgcaccaagg gtgagtttac aagattcacg cagagcacat agagatcaca
     1501 gagtaggggc gggtttgaaa cccgccctct ttttatgtgt cgttaaacac tctaggagtt
     1561 atttgtggcg ggcagcagct tactagcgtt aatc
//
LOCUS       DATIRS010000952         2586 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_366929, whole genome shotgun sequence.
ACCESSION   DATIRS010000952 DATIRS010000000
VERSION     DATIRS010000952.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2586
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_366929"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..613)
                     /locus_tag="VLM90_12050"
     CDS             complement(<1..613)
                     /locus_tag="VLM90_12050"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ13751.1"
                     /translation="MGGRMFMKSLVVFACVWVCLAGISSAATSDDGFYRGKTVRLIVA
                     FSPGGGYDTYSRTIARHLGKYIPGNPSVVVDNMTGAGGFIHANYMFKQAKPDGLTIGN
                     NSGGLFLQQVMGAKGIEFDGKKFEYLGAPAVDHLVCAIAKASGVTSMDRWFAAKEPVR
                     FGGVGPGGFASDLPRVLQAALGLPIRVIDGYKGTSDIRLATESG"
     gene            complement(652..999)
                     /locus_tag="VLM90_12055"
     CDS             complement(652..999)
                     /locus_tag="VLM90_12055"
                     /EC_number="4.2.1.96"
                     /inference="COORDINATES: protein motif:HMM:NF002016.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008124 -
                     4-alpha-hydroxytetrahydrobiopterin dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006729 - tetrahydrobiopterin biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HSQ13752.1"
                     /translation="MEELTEQKCVACRVGAPSVTADEIKELHPKVPDWRIISEDNIPK
                     LDRLYKFKDFKDAIAFTDAVGAAAEEEGHHPRLTTEWGRVAVTWWTHKIKNLHHNDFI
                     MAAKTDAIYQKFA"
     gene            complement(1225..2277)
                     /locus_tag="VLM90_12060"
     CDS             complement(1225..2277)
                     /locus_tag="VLM90_12060"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ13753.1"
                     /translation="MKCSLFTEIQCPEGASPVQRLAEFMDQAELADRLGYDTYWVAEI
                     HCQPKFSLMSAPYVALGAVAQRTKNLRLGVAVNTLPVHHPVQLAEQSAMLDLVSGGRM
                     EFACGGGHPHSRAYECFGADHKATHEVMAEAMAVIRKAWSDEKLVHNGKFFQIPEVIV
                     NPKPVQRPLPPFWMATSSLDGVEVGARLGVNMFLPIHTRMPDQVYEFADAYWAGLKKH
                     GHDRKSRSLGLLVPMHIAKTTEEAKARAEAGVMSYFKTILDLRLDYTDWLNQRGVELP
                     ARLRTAAGAMVDYATVCEKHAVIGDAPFAVAKLQALCERTSATQILGWFNIGNMPHAD
                     VKDAMQRFATDVMPKL"
BASE COUNT          501 a          810 c          727 g          548 t
ORIGIN      
        1 cgccgctctc ggtcgccaga cgaatgtccg aagtaccttt gtagccgtcg atcacgcgga
       61 tcggcaggcc gagcgccgcc tgcaacacgc gcggcaagtc ggaggcgaat ccgccgggac
      121 cgacgccgcc gaaacgcacc ggttccttgg cggcgaacca ccggtccatc gaggtaacgc
      181 cgctggcctt ggcaatggcg caaactaaat gatccaccgc cggcgcgccg agatattcga
      241 atttcttgcc gtcgaactcg atgcccttgg cgcccatgac ctgctgcaag aacaagccgc
      301 cggagttgtt gccgatggtc agaccgtccg gcttggcctg cttgaacatg tagttggcgt
      361 ggatgaagcc cccggcgccg gtcatgttgt cgacgaccac cgaaggattg cccggaatat
      421 acttgccgag atggcgcgcg atggtccgtg aataggtgtc atagccgccg ccaggggaga
      481 acgcgacgat cagccggacc gtcttacctc ggtaaaaacc atcgtcactg gttgcagcgg
      541 aactgattcc cgcgagacac acccatacac aagcgaacac caccaaactt ttcataaaca
      601 tccggccacc cattattcca tcactcctat actccaacgc tccagcccat cctaggcgaa
      661 cttctggtag atcgcatcgg tcttcgccgc catgatgaag tcgttatgat gcaagttttt
      721 gatcttgtgc gtccaccagg tgaccgcgac tctgccccac tcggtggtca ggcgcgggtg
      781 gtgcccttcc tcttcggcgg cggcgccgac ggcatcggtg aaggcgatgg cgtctttgaa
      841 gtctttgaat ttgtacaggc ggtcgagttt gggaatgtta tcttcgctga taatccgcca
      901 gtcaggaact ttgggatgca gctctttgat ttcatccgcg gtcaccgacg gcgcgccaac
      961 ccggcacgcg acgcatttct gttcagtcag ctcttccatg ttaaactcct tttcaacctg
     1021 aatttttccc gccaaggcgc aaagacgcca agttcggaat tgttgtcatt tcgccccatg
     1081 ggagaatctt tatcaggtcc ctcgatttcg ctcgcgatgg ctggcatcgg cccctcacct
     1141 ttgcgccttg gcgcctttgc gggagacatt ccgagattcg ctttcaactc ggccgcgccc
     1201 ttccttcgtc ctgaataatc tcaatcacag cttcggcatc acgtccgtcg caaagcgctg
     1261 catggcgtct ttgacatcgg cgtgcggcat attgccgatg ttgaaccagc cgaggatctg
     1321 cgtggcactg gttcgctcgc atagggcttg cagtttcgcc acggcgaacg gtgcatcgcc
     1381 gatgaccgcg tgcttttcgc agaccgtggc gtagtcaacc atcgcgcccg ccgccgtgcg
     1441 caagcgtgcc ggcagttcga ctccgcgttg gttgagccag tcggtgtaat ccaaccgcag
     1501 atcgagaatg gtcttgaaat agctcatcac gccggcttcg gcgcgcgcct tggcttcctc
     1561 ggtggtcttg gcaatatgca taggcacgag caagccgagc gaccggcttt tgcggtcatg
     1621 gccatgcttc ttcaatcccg cccagtaggc gtcggcgaac tcgtaaactt gatcgggcat
     1681 gcgcgtatgg atcggcagaa acatattcac gcccagccgc gcgccgactt cgacgccgtc
     1741 gagggagctg gtcgccatcc agaacggcgg cagcggcctt tgcaccggct tgggattgac
     1801 gatcacttcg gggatttgga aaaacttgcc gttgtgaacc aacttttcgt ccgaccaggc
     1861 cttgcggatc accgccatcg cctcggccat gacctcgtgg gtcgccttgt ggtcggcgcc
     1921 gaaacactcg taggcgcggc tgtgcggatg accgccgccg caggcgaact ccatgcgccc
     1981 gccgctgacc agatccaaca tcgccgattg ttcggccagc tgcaccgggt ggtgcaccgg
     2041 caaggtgttg acggcgacgc ccaggcgcaa gttcttggtg cgctgcgcca ccgcgccgag
     2101 ggcgacgtag ggcgccgaca tcaaggaaaa cttcggctgg caatggatct cggcaaccca
     2161 gtaggtgtca tagcccaggc gatccgcgag ctcggcctgg tccatgaact cggccaagcg
     2221 ctgcaccggc gacgccccct ccggacattg gatttcagta aatagactac atttcacgat
     2281 tgagatactt cctctctata ttgcggtcgt cgaccgcttg cgccccccaa tgtaaaaacc
     2341 cgacctcacc acgaagcaca cgaagagcac gaagttcgga attcaaatta ttcaaaccct
     2401 tcgtgtcctt cgtactacta tccgtgataa tttgcgcggc ttgcgcaaat tgtccgggag
     2461 ccgtgacgcc tcggattcgg atattcctcg cgccaaggcc gccaaggtcg cgaagtgaca
     2521 ggccagtggc ctgtcatcct gagcgacaga ccgtgtgaaa tccccgttca tggttcgact
     2581 ggactc
//
LOCUS       DATIRS010000953         3538 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1350284, whole genome shotgun sequence.
ACCESSION   DATIRS010000953 DATIRS010000000
VERSION     DATIRS010000953.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3538
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1350284"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            202..678
                     /locus_tag="VLM90_12065"
     CDS             202..678
                     /locus_tag="VLM90_12065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13754.1"
                     /translation="MSRLLGKELPAALQVRLGGGDVESHEGKIIPIVTIDEAGWAHPA
                     LLSYYEIAAKDASTLDMALLKDSSTSKNLRQAGKVTLMISDQGVNYYLKGSVRELHYE
                     MPGAAPVSRFRVTLEQVIEDQEPNAEITTGLTYRRMTKRDPNDFAAKVFRLLREES"
     gene            675..1976
                     /locus_tag="VLM90_12070"
     CDS             675..1976
                     /locus_tag="VLM90_12070"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSQ13755.1"
                     /translation="MKFKKTIVTVVLLLAAGGAGYAYWRMGNGPKEPPYLTTPVAKAN
                     IRQVVSSTGTLQAVTTVLVGSQVSGTIAKLSVDFNSKVKKGDIVAELDQARFAARVEE
                     TRANVAAAQANLAKSKVALEDAERTLKRTKELKQRELVSQSELDAAQTAYDSARSQVN
                     VTQAQVGQAQASMNQAQIDLGYTVIRSPVDGIVISRNIDVGQTVAASLSAPTLFTIAN
                     DLTKMEVHTNVDEADVGNISDGQDVSFTVDAHAQRRFRGKVNQVRNAPINVQGVVTYN
                     SVVRINNKELLLKPGMTANVQFLVAQKEDALAIPNVALRFRPPEEKNEAQELLRQEQG
                     RVGGRITARRTSRGGGSGVVGGEGRCVRQVKVYVLKDGQAQPVDIQVGITDGSKTEII
                     AGLNENDPVIIGMSTAATAPPQSGVASPFQPQPVTGGFRGR"
     gene            1973..2686
                     /locus_tag="VLM90_12075"
     CDS             1973..2686
                     /locus_tag="VLM90_12075"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ13756.1"
                     /translation="MSEVIRVQDLQKVYRMGDVEVPALRGINLTIGRGEFVAVMGSSG
                     SGKSTFMNIIGCLDRPTGGNYWLEVEEVAALSADEWAHIRNKRIGFVFQGFNLLSRTT
                     ALENVELPMMYNGFAGKERHRRAVEVLDLVGLGERHDHTPNRLSGGQQQRVAIARALV
                     NKPSLILADEPTGNLDSVTSSEIMGLFQHLNSDQGITIVLVTHEADIAEHAKRQIIFR
                     DGEVISDKPNNQVLVKLES"
     gene            2699..>3538
                     /locus_tag="VLM90_12080"
     CDS             2699..>3538
                     /locus_tag="VLM90_12080"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSQ13757.1"
                     /translation="MTFRIALRALARNKLRAFLTMLGIIIGVGAVIAMVAIGEGAKST
                     IRSQISALGTNVLIVLPGSNVQGGVRAGTGNVNTLVDTDARAIARELRSVAYASPVMR
                     RQEQLIAGNLNWGSLAQGVAPEFEQIRDWQIEAGRFLHDGDMDSAAKVAVIGQTVARQ
                     LFGADDPIDSVIRIRNIPFRIVGVLAGKGQTGQGQDQDDTVMIPYTTMQKRLMRITFV
                     QSIVVRAVSAEKVQEAQEQITLLLRQRHRIAEGREDDFTVRNLSDIAEAAQSTARVMA
                     ILLG"
BASE COUNT          762 a         1035 c         1077 g          664 t
ORIGIN      
        1 gtacccggga gtcatcaagc tctttaccga tccgacaagc ggggtgtttc acaaggcgtt
       61 tctgaaggtt aagttctatt gcgtggtgcc ggagaaactg ttctttatcg ataacgcaca
      121 ggggtttggc aagcgccagg aactgttatt ggagccatag ccggcagtgg cgagccaacg
      181 tctaaggagt attgattcac catgtcacgg ctactaggca aagaattgcc ggcggcattg
      241 caagtgcggc tcggcggcgg ggatgtcgaa agccacgagg gcaagatcat cccgatcgtt
      301 actatcgacg aggccggctg ggcccatcca gcgctgctgt cctattacga gatcgccgcc
      361 aaggatgctt cgaccctcga catggcgttg ttgaaggaca gctcgacgtc gaagaatttg
      421 cgccaagccg gcaaggtgac gctgatgatt tccgaccagg gtgtcaatta ttatcttaag
      481 ggcagtgtgc gggagctaca ttacgagatg ccgggagcgg cgccggtgtc gcgctttcgc
      541 gtgaccttgg agcaggtcat cgaggaccaa gagcccaatg ccgagatcac cacgggctta
      601 acttatcggc gcatgaccaa gcgcgacccc aacgatttcg cagctaaggt atttcgctta
      661 ttgcgcgagg agtcatgaag ttcaagaaaa ccatagttac cgtcgtatta ctcttggctg
      721 ccggcggcgc cggttacgct tattggcgta tggggaacgg acccaaagag ccgccatatt
      781 taactacgcc ggtagcgaag gcgaacattc gtcaagtggt ttcctcgacc ggtacgctgc
      841 aggcggtgac cacagtgctg gtcggcagcc aggtgtccgg caccatcgcc aagctcagcg
      901 tcgacttcaa cagcaaggtc aaaaaaggcg acatcgtcgc cgaactcgac caggcgcgct
      961 ttgccgcacg ggtggaagag acccgcgcca atgtggcggc cgcccaagcc aacttggcga
     1021 agtcgaaagt cgccctcgaa gatgccgaac ggactctgaa acgcaccaaa gaactcaaac
     1081 agcgcgagct ggtgtcgcag agcgagttag acgccgcgca gactgcctat gattcggcgc
     1141 gctcgcaggt caacgtcact caagcacaag tgggccaagc ccaggcatcg atgaatcaag
     1201 cgcagatcga cctgggctac acggtcattc gctcgccggt ggacggcatc gtgatttcgc
     1261 gcaacatcga tgttggccag actgttgcgg cgtcgctgtc ggcgccgacg ctgttcacca
     1321 tcgccaacga cctaaccaag atggaagtgc ataccaacgt cgacgaggcg gatgtcggca
     1381 atatctccga cggacaagac gtaagcttca ccgttgatgc ccatgcgcag cggcgcttcc
     1441 gcggcaaggt gaatcaagtg cgcaacgcac cgatcaacgt ccagggcgtg gtgacttata
     1501 attcggtggt gcgcatcaac aacaaagagc tcttgctcaa gcccggcatg accgccaacg
     1561 tgcaattcct cgtggcgcaa aaagaagacg cgctggcgat tcccaatgtc gcgctgcgct
     1621 tccggccgcc ggaggagaaa aacgaagccc aggaattgct gcgccaggag cagggacggg
     1681 tgggcggacg cattacggcg cgtcgcacca gccgtggcgg cggcagcggc gtcgtcggcg
     1741 gcgagggccg gtgcgtgcgc caagtgaaag tatatgtgct caaagacggg caggcccagc
     1801 cggtcgacat ccaggtgggc atcaccgacg gctccaagac cgagattatc gccggcctca
     1861 atgagaacga tccggtgatc atcggcatgt cgactgccgc caccgcgccg ccccagagcg
     1921 gcgtggccag tccgttccaa ccccagccag tgacaggcgg attcagagga cgatgagcga
     1981 ggtcattcgc gtccaagatt tgcaaaaggt ctaccgtatg ggcgatgtcg aagtgccggc
     2041 cttgcgcggc attaatttaa ccatcgggcg cggtgagttc gtcgcggtga tgggctcgtc
     2101 tggttccggc aagtcgacgt tcatgaatat catcggctgc ctcgaccgcc ccaccggcgg
     2161 caattactgg ctcgaggtcg aagaggtcgc ggcgctcagc gccgacgaat gggcgcatat
     2221 ccgcaacaag cgcatcggtt tcgtcttcca aggatttaac ttgctgtcgc gcaccacggc
     2281 gctggagaat gtcgagctac cgatgatgta caacggcttc gccggcaaag agcgccatcg
     2341 ccgcgcggtg gaagttttgg accttgtcgg tttgggcgag cgtcacgacc acacgcccaa
     2401 tcgtctttca ggcggccagc agcagcgggt ggcgattgcc cgcgcgttgg ttaacaagcc
     2461 gtcattgatt ctcgccgacg agcccaccgg taatctcgat tccgtcacca gcagcgagat
     2521 catgggcttg ttccagcatt tgaatagcga tcagggcatt accattgttc tggtcaccca
     2581 cgaagcggac atcgccgagc atgccaagcg gcaaatcatc ttccgcgatg gcgaagtgat
     2641 ttccgacaag cccaataacc aagtgttggt gaaactggag tcgtaaatgc gcgggttgat
     2701 gacattccga atcgcgctgc gcgccctggc gcgcaacaag ctgcgcgcgt tcctcaccat
     2761 gctcggcatc atcatcggtg tcggcgcggt gatcgccatg gtcgccatcg gcgagggtgc
     2821 gaaatcaaca attcgctcgc agatctctgc cttgggcacc aatgtcttga tcgttttgcc
     2881 cggcagcaac gtccaaggcg gcgtgcgcgc cggcaccggc aacgtcaaca cgctggtcga
     2941 taccgacgct cgcgccatcg cccgcgaact gcgatcggtt gcctacgcct cgccggtcat
     3001 gcgccgccag gaacaactga tcgccggcaa cttgaactgg ggcagtttgg cccaaggcgt
     3061 ggcgccggag tttgagcaaa tccgcgactg gcagatcgag gccggacgct ttctgcacga
     3121 cggcgatatg gactctgccg ccaaggttgc cgttatcggt cagaccgtgg cgcgccagtt
     3181 gttcggtgcc gacgatccca tcgattccgt catccgcatt cgcaatattc catttcgcat
     3241 cgtcggggtt ctcgccggca aaggccaaac cggccaaggc caggatcaag acgataccgt
     3301 gatgattcct tacacgacca tgcaaaagcg gctcatgcgc atcaccttcg tgcagagcat
     3361 tgttgtcaga gccgtcagcg ccgagaaagt tcaggaagcc caggagcaga tcacgttgct
     3421 gttgcgccag cgccatcgta tcgccgaagg gcgcgaggac gatttcaccg tgcgcaatct
     3481 ctccgacatc gccgaagcgg cgcagagcac agcgcgggtg atggcgattc tgttgggt
//
LOCUS       DATIRS010000954         2884 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_268562, whole genome shotgun sequence.
ACCESSION   DATIRS010000954 DATIRS010000000
VERSION     DATIRS010000954.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2884
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_268562"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..945
                     /locus_tag="VLM90_12085"
     CDS             <1..945
                     /locus_tag="VLM90_12085"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ13758.1"
                     /translation="DLLVADIVAFIAYLNVLAWPTAAFGWMLSLVERGRAAMRRLEEI
                     LATKPAIATQAMPLPVQGLKQGMEFRNVAFAYNGQRNGHAAIEGISFKLPVGKSVGLV
                     GRIGSGKSTVAQLVPRLFDASSGEILMDGQPLTQLPLSELRRMMGYVPQDPFLFSTTL
                     RRNIALGREEYSEAELNRAIAIAKLDRDLAIFPKGLETLVGERGVTLSGGQKQRATLA
                     RALIMDSPVLVLDDCLSSVDAQTEAEILAGLRPFLKEKTCLIISHRISAVKEADEILV
                     LDGGRIIERGDHEALVRRGGVYADLYQKQRLSEELEQI"
     gene            945..2759
                     /locus_tag="VLM90_12090"
     CDS             945..2759
                     /locus_tag="VLM90_12090"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ13759.1"
                     /translation="MAQAAQQEEVLGKAYDLRLIRRLWKFIIPYKRLFYLTMLLLPLQ
                     QACGVAQPYVMKIGIDQYIAGKDLWGLQNVMLLFLAALIGETVAAFAHHYFSMLVAQR
                     CLADMRAAVFAHVQKLPMSYFDRNPVGRLVTRMTTDVDVLQEMFSSGVLTLVSDLIMV
                     VWIVSIMFYLNVGLALVSLALIPPMMFAINFFRVKARQNYRQIRERIARVNAYLGEAI
                     SGMTVIQLFSRETKTYREFEELNADHRDAYHLSNSYEAALYSMVEAAGSVSLGLLLWY
                     GGGEVLHGIIGIGTVVAFKEYVHRFFVPMRDFSQKYAVMQSAMASAERIFQLLDTEVD
                     IQNPKNAVVPKPFRGEVVFDNVWFSYKAGDPVLKGVSFRIAPGEKVAVVGATGSGKTT
                     TIKLLNRSYDIQQGSIKVSGVDVREWDLHALRRHIGVVLQDVFLFSGDVRGNLILGDP
                     SVSQERVEQAAKYANADQFIRQLPDGYLAQVRERGSNFSVGQRQLLSLARVLVFGPEI
                     LVMDEATSSVDTETEALIQDALDKVMRDRTCLLIAHRLSTIRNADRIIVLHHGEVREI
                     GSHAELMDRQGIYYRLYQLQYEREELKFTNHADSKVIA"
BASE COUNT          542 a          829 c          885 g          628 t
ORIGIN      
        1 gacttactgg tcgctgacat cgttgccttt atagcttact tgaacgtgct cgcgtggccg
       61 acggcggcct tcggctggat gctttcgctc gtcgagcgcg gccgggcggc gatgcgccgg
      121 ctggaagaaa ttctcgcgac caaaccggcg atcgctaccc aagcaatgcc gttgccggtt
      181 cagggtctca agcagggcat ggaatttcgc aatgtcgcgt ttgcctacaa tggccaacgc
      241 aacgggcacg cggccatcga agggatcagc ttcaaactcc ccgtcggcaa gtcggtcgga
      301 ttggttggcc gcatcggttc gggcaagagc accgtggcgc aattggtacc gcggctgttc
      361 gatgccagca gcggcgagat tctcatggat gggcagccgc ttacccagct gccgctctcg
      421 gagctgcgcc gcatgatggg ctatgtgccg caggatccgt ttctgttttc gaccacgctg
      481 cggcgcaata tcgccctggg ccgcgaggaa tacagcgaag cggagcttaa tcgggcgatc
      541 gcgatcgcca agctcgaccg cgatttggca atctttccca aaggtttgga aaccctggtg
      601 ggcgagcgcg gcgtgaccct ttccggcggg caaaagcagc gcgcgacctt ggcgcgggcg
      661 ttgatcatgg actcgccggt gctggttctc gatgactgtc tttccagtgt cgacgctcag
      721 accgaagcgg agatcctcgc cgggctgcgg ccgtttctca aggaaaaaac ctgcctgatc
      781 atttcgcacc gtatttcggc ggtgaaggaa gcggacgaga tcctcgtgct cgacggcggc
      841 aggatcatcg agcgcggcga tcacgaagcc ttggtgcgcc gggggggcgt ctacgccgat
      901 ctctaccaga agcaacgctt gagcgaggag ctcgaacaaa tctaatggcc caagccgcgc
      961 agcaagaaga agtcctcggc aaagcctacg atcttcgcct gatccggcgc ttgtggaagt
     1021 tcatcattcc ctacaagcgg ctgttttatc tcaccatgct gctcttgccg ctgcagcagg
     1081 cttgtggcgt cgcccagccg tatgtaatga aaatcggcat cgatcagtat atcgccggca
     1141 aggatctctg gggcttgcag aacgtcatgc tgcttttcct cgccgcgcta atcggcgaga
     1201 cggtggcggc gtttgcgcac cattactttt caatgttagt ggcgcagcgt tgtttggcgg
     1261 acatgcgcgc ggcggtgttc gcccatgtgc agaaattgcc gatgagttat ttcgaccgca
     1321 atccggtggg ccgtttggtg acgcgcatga ccaccgacgt cgacgtgctg caggagatgt
     1381 tttcctccgg tgtcctgacg ctggtgtccg acctcatcat ggtggtgtgg atcgtcagca
     1441 tcatgttcta tctcaacgtt ggcttggcgc tggtgtcact ggcgttgatc ccgccgatga
     1501 tgttcgcgat taactttttc cgcgtcaagg cacgccagaa ctaccgccag atccgcgagc
     1561 gcatcgccag ggtgaatgcc tatctaggag aggcgatttc cggcatgacg gtgatccagc
     1621 tgttctcccg cgagaccaaa acctatcgcg agttcgaaga gcttaacgcc gatcatcgcg
     1681 atgcttacca tctgtcgaac agttacgagg ccgccctcta ttccatggtc gaagccgccg
     1741 gctcggtgag cttggggctg ctgctctggt acggcggcgg cgaggtcttg cacggtatca
     1801 tcggcatcgg cacggtggtg gccttcaaag aatacgtgca ccggttcttt gtgccgatgc
     1861 gcgatttcag ccagaagtac gcggtcatgc agtcggcgat ggcttcggcg gagcggattt
     1921 tccaactgct cgacaccgag gtcgatattc aaaacccgaa aaacgccgtg gtgcccaagc
     1981 cgtttcgcgg cgaagtggtc ttcgacaacg tttggttcag ctacaaggcc ggcgatccgg
     2041 tgttgaaagg cgtctcgttt cgcatcgcgc cgggggaaaa agtcgccgtc gtcggcgcca
     2101 ccggctcggg caagacgacc accatcaagc tgctcaaccg ctcctatgat atccaacagg
     2161 gctcgatcaa agtcagcggc gtcgatgtgc gtgagtggga tttacacgcc ttgcgccgcc
     2221 atatcggcgt ggtgttgcag gatgtgtttt tgttttccgg cgacgtgcgc ggcaacctga
     2281 tcttgggcga tccgtcggtc tcccaggagc gcgtcgaaca agcggccaag tacgccaacg
     2341 ccgatcagtt cattcgccag ttgcccgacg gctatcttgc ccaggtgcgc gaacggggca
     2401 gcaatttttc cgttggccaa cgccagctct tgtcgctggc gcgggtgctg gtgttcggtc
     2461 cggaaatcct ggtgatggac gaggcgacct ccagcgtcga cactgaaacc gaagcgttga
     2521 tccaagacgc tttggataaa gtcatgcgcg accgcacctg cctgttgatc gcgcaccggc
     2581 tgtcgaccat ccgcaacgcc gaccggatta tcgtcttgca ccatggcgag gtgcgcgaga
     2641 tcggcagcca cgccgagctg atggaccggc aggggattta ttaccggctt taccagctgc
     2701 aatacgagcg cgaagaattg aagttcacca accatgccga ctccaaggtt atcgcctagc
     2761 gatcgcgcgc gctgcccttg agagagtccc ggggcgctcg tgatgccgca tcatttttta
     2821 tgctgtacgc tgtttcatcg atccgatgat tctatgaaag ttgctaaatg gggaagcggt
     2881 ttgg
//
LOCUS       DATIRS010000955         1955 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_367053, whole genome shotgun sequence.
ACCESSION   DATIRS010000955 DATIRS010000000
VERSION     DATIRS010000955.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1955)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1955)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1955
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_367053"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1955)
                     /locus_tag="VLM90_12095"
     CDS             complement(<1..>1955)
                     /locus_tag="VLM90_12095"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HSQ13760.1"
                     /translation="AVIGWLIRRALLAEVDEISRTASAIAAGDLSRRLAARGKSDELD
                     ALARTVNGMLEQLARQNRQLEEEIAVRRQAEEALHRAHDDLEALVAQRTGQLALANES
                     LRRSESYLAEAQRLSLTGSFGWNLSREELFWSKETFFILGYDEAIKPTLERVLERVHP
                     EDRDLVQQTFDQASRDGANVDFEHRLLFPDGSVKNVHVIAHAVEAQAGTLEYVGAVSD
                     VSAAKRAEEKLRQSESELQQLVDIVPQHIFVLGPDGSRVYSNQVAREYHGLSPKDPAA
                     DHLAMFVHPDEVESALAERQRLIARGAPYEMEVRLRGKDGQYRWFLIRGNPLRDEQGN
                     IIRWYGTRTDIEDRKCAEEKLRQDERELRRITDAIPQAISVLAPDGKILYSNEVVLDY
                     TGVSLEDVKADDFRAKLFHPDDLERFGAERQQALRRGEPFEVELRARRKDGQYRWFLV
                     RYHPLRDDEGRIIRWYATGVDIDDRKQAEDRVLKENLALREEIDHSSMFEEIVGSSAA
                     LRKVLAQVAKVAPVDSTVLILGETGTGKELIARAIHKRSKRSSRAFIRVNCAAIPQSL
                     IASELFGHEKGAFTGALQRRLGRFELADGGTIFLDEIGELPAETQIALLRVLQEGELE
                     RVGSSQTISVDVRVLGATNRDMQAAVA"
BASE COUNT          359 a          636 c          556 g          404 t
ORIGIN      
        1 ggccacggcg gcctgcatat cccgattggt ggcgccgagc acgcgcacgt ctacagaaat
       61 cgtttggctg ctgccgacac gctccaactc cccttcctgg agcacgcgca agagggcgat
      121 ctgcgtctcg gccggcagtt cgccgatctc gtctaaaaaa atcgtcccgc cgtcggccag
      181 ctcaaaccgc cccaaacgcc gttgcagcgc accggtgaat gcgcccttct cgtggccgaa
      241 cagttcggat gcgatcagcg attgcgggat cgccgcgcag ttgacgcgaa taaaggcgcg
      301 cgacgaacgt ttcgagcgct tatgaatggc gcgggcgatc agctccttgc cggtgccggt
      361 ttcgccgaga atcagtaccg tcgaatccac cggcgcgacc ttggcgactt gcgccaatac
      421 tttgcgcagt gctgcggaag aaccgacgat ctcctcgaac atcgaagagt gatcgatttc
      481 ctcgcgcaac gccaggtttt ctttcaggac gcgatcttca gcctgcttgc ggtcgtcgat
      541 atcgacgccc gtcgcgtacc agcgaatgat ccgtccctcg tcatcccgca atgggtggta
      601 gcggactaaa aaccaacggt actgtccgtc tttacgccgc gctctcaatt ccacttcgaa
      661 aggctcgccg cgccgcagcg cctgctggcg ctccgcgccg aatctctcga gatcatcggg
      721 atgaaaaagt ttggcgcgaa aatcatcggc cttgacatcc tccaggctaa caccggtgta
      781 gtcgagcacc acctcgtttg agtagagtat cttaccgtcc ggcgccagga cgctgatcgc
      841 ttggggtatt gcatcggtga tccggcgcag ctcgcgttcg tcttggcgga gtttttcttc
      901 ggcgcacttg cggtcctcga tgtcggttct tgtgccgtac caacgaatga tgttcccctg
      961 ctcatctcgc aacggattgc cgcgaatcag aaaccagcga tactgcccat ccttgccgcg
     1021 tagccgcacc tccatctcgt agggcgcgcc gcgggcaatc agccgctggc gttcagccag
     1081 cgcgctttcc acctcgtccg gatgaacgaa catcgccaga tggtccgccg cgggatcctt
     1141 ggggctcagg ccgtgatact cgcgcgcgac ctgattggaa tagacccggc tgccatccgg
     1201 accgaggaca aagatatgct gtgggacaat atcgaccagc tgctgcagct cgctttcact
     1261 ttgccggagc ttttcttccg cgcgttttgc cgcgctgacg tccgacaccg ccccgacata
     1321 ctccagcgtg cccgcttgcg cttctacggc gtgggcgatg acgtgaacgt ttttgacgga
     1381 gccatccgga aatagcaacc gatgctcaaa atccacatta gcgccgtcgc gcgaagcctg
     1441 atcgaaggtc tgttgcacca agtcgcggtc ctctgggtgg acccgttcga gcacgcgctc
     1501 caaggttggc ttgatggctt cgtcgtaccc caggatgaaa aacgtctcct tcgaccagaa
     1561 caattcctct ctggaaagat tccagccaaa actgccggtg aggctcaatc tctgtgcttc
     1621 ggccaaataa ctttcgctgc gccgcagtga ttcgttggcc agcgccaatt gcccggttcg
     1681 ctgcgcgacc agcgcctcca ggtcgtcatg agcgcgatgg agcgcctcct cggcttgccg
     1741 gcgcaccgcg atttcttcct ccaattgccg gttttgcctg gctagctgtt caagcatgcc
     1801 gttgacggtc cgcgccagag cgtcgagctc atccgatttg ccgcgcgccg ccaaacggcg
     1861 cgagagatcg ccggcggcga tggcggaggc agtgcggctg atttcatcca cctcggcaag
     1921 cagcgcgcga cgaatcagcc agccgatgac cgcgc
//
LOCUS       DATIRS010000956         1723 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1154501, whole genome shotgun sequence.
ACCESSION   DATIRS010000956 DATIRS010000000
VERSION     DATIRS010000956.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1723
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1154501"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            493..1506
                     /locus_tag="VLM90_12100"
     CDS             493..1506
                     /locus_tag="VLM90_12100"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ13761.1"
                     /translation="MHFYINILTTYYPDIDPPYDVYYQQILQQIELAEELGWECFMFN
                     EHHFLGYGGLVANPAVLLATAAARTKNIRLGPCIAILPLRHPLHTAEDYAMVDAISGG
                     RLEFGIGSGNTEMDYRVFGVTRENDRERAAEALEVILKVWSNERASHQGKFWQFEELT
                     LYPRPVQRPHPPIWVAGTSAQGLGWAGRQGYHIMTVGHPHPPERVGPGVAAWKQGLIE
                     AGIDPKDRHCQFHVRTHVNENAARAKEIGMAAVTRYDEISRIGRRSLTAAPGEYDWDM
                     MLATGRNNYGDAGQVIRGIHNAGKNYFFDTLTTTFNYGGIPHQEILKSMRLFAKEVMP
                     AFK"
BASE COUNT          381 a          515 c          469 g          358 t
ORIGIN      
        1 ccgccaattt aaccgcggca tggcccgcga cctgatggcc aagcccgaag gcatgcagct
       61 gatgatcgac ttggtgcgcg aagactcgaa ggtcacccaa ccgttcacga tcccgcaaat
      121 cgtcgactac agcttcctcg aaaaagcccg ccgcgatctc ggtgcgagcc gttgatgcag
      181 tttgactgaa taccggattt caccacgaag ggcgtagcgc agcgaagctg caaccgcaaa
      241 gaagaatggc cgcaaagaac gcaaagggcg caaaaaagaa tcgagagttg taaaggcggg
      301 tttgaaaccc gcctttacaa ctcggaattc ctgctctgaa ttgtttgcgt tctttgcggc
      361 cagtgctccg agttagaatc ttctactcaa tgctctctgt gccctctgcg atgaaattgt
      421 tggtccgttt gtttcagctt tgccgcttct ggccgattgt gttacagcgt taacgattag
      481 caggagacca acgtgcactt ctatatcaac atcctcacga cctactaccc ggacatcgat
      541 ccgccttacg acgtctacta ccagcaaatt ttgcagcaga ttgagctcgc cgaggaattg
      601 ggctgggaat gtttcatgtt caatgaacat cacttcctgg gctacggcgg actcgtggca
      661 aatcccgccg tgctgttggc cactgcggcg gcgcgcacta aaaacatccg cctcggccct
      721 tgcatcgcca tcctgccgct gcgccatccg ctccacaccg ccgaagacta cgccatggtc
      781 gacgccattt ccggcggtcg cttggagttt ggcatcggct cgggaaatac cgagatggat
      841 taccgcgtct tcggcgtcac tagggaaaat gatcgcgagc gcgctgccga agccctcgaa
      901 gtgattttga aagtttggtc caacgagcgc gccagccatc agggcaagtt ctggcaattc
      961 gaagaattga cgctttatcc gcggccggtg caacggcccc acccaccgat ctgggtcgcc
     1021 ggcacttcag cgcaaggctt ggggtgggcg gggcggcagg gctatcacat tatgaccgtc
     1081 ggccatcctc atccgccgga acgagttggc cccggcgtcg cggcttggaa gcaaggtttg
     1141 attgaagccg gcatcgatcc caaagatcgc cattgccaat ttcacgtgcg cacccatgtc
     1201 aacgagaacg ccgcgcgcgc caaagagatc ggcatggctg cggtgacacg ctacgacgag
     1261 atttcccgca tcggccgccg ttcattgacc gccgcgccgg gagaatacga ctgggacatg
     1321 atgttggcca ctgggagaaa taactacggc gatgccggcc aagttatccg gggcattcac
     1381 aacgccggca agaactactt cttcgacacc ctcaccacca cattcaatta cggcggtatt
     1441 ccccatcagg aaatcttgaa atccatgcgg ctgttcgcca aagaagtcat gccggcattc
     1501 aaatagatct aatgagcgaa cctgagccgt ctgctcgcag gttttatgaa cgatcgcagc
     1561 ctacttgccg gcagcgccgg gcggcaggat ctccaaaaca actttcgcca tccccttctg
     1621 catgaagccg aggatcgtgg cagcgcggtg tgtaacgtcg atcacccgac cgggctgctg
     1681 cggtccgcga tcgttgacgc gcacgatcac gctcttgttg ttg
//
LOCUS       DATIRS010000957         1689 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1842392, whole genome shotgun sequence.
ACCESSION   DATIRS010000957 DATIRS010000000
VERSION     DATIRS010000957.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1842392"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(187..690)
                     /locus_tag="VLM90_12105"
     CDS             complement(187..690)
                     /locus_tag="VLM90_12105"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HSQ13762.1"
                     /translation="MAFIGKLGDQSFTVEIEETGKSVYRVSVDGNQFVVDGKKTGRTN
                     YSLIVDNRSFEIEVDSADDEYRVLVDGRNYHINLVDERRVRVGGTQGGLELQGRQKVS
                     VPMPGKVIAVLVSEGDQVEKGQGLVIVEAMKMENEVHSPIAGEIKEIKVKPGDTVEGG
                     ALLVVVE"
     gene            complement(702..>1689)
                     /locus_tag="VLM90_12110"
     CDS             complement(702..>1689)
                     /locus_tag="VLM90_12110"
                     /inference="COORDINATES: protein motif:HMM:NF014805.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13763.1"
                     /translation="AVGSEAKSSFGDPRLYVEKFIVKPRHVEIQVLADSYGRVIHLYD
                     RECSIQRRHQKVIEESPGPGLEDRTRRRIGRIAIQGARAVGYVGAGTLEFLLDDQQNF
                     YFLEMNTRLQVEHAVTERVVGIDLVKAQIEIAAGGYLPWRQRHITQTGHAIECRIYAE
                     DPERDFMPCPGRIEGLRLPEGLGLRNDNGVYEGAEVSIYYDPMIAKLITWGENRVEAI
                     LRMRRALREYQVRGIKTNISFHQWILRHPRFMSGDVNTGFIDEEYNPKANEEVYPHKE
                     IALASAAIAALHGEQERTLGLLAKGAAEPSKWRQQRASLRRSALPGNRGWRR"
BASE COUNT          341 a          514 c          465 g          369 t
ORIGIN      
        1 accaacacta gattgcaata gtgcagacct gcctgccgca acgccaactc gaaagacgcc
       61 aatttttctt tgtggacgcc gacgcctttg gtaaaaaaac atttcttcgg aatcatggtg
      121 cgctgctata acatgaaagc actgagctga caagattcgg tcagggaatt tatcgtgaaa
      181 tacggcctac tcgacgacaa ccagcagagc gccgccttcg acggtgtccc ccggcttcac
      241 tttgatctct ttgatttcgc ctgcgatggg actatgcact tcgttttcca tcttcatcgc
      301 ttcgacgatc accagtccct ggcccttttc cacctggtcg ccctcggaaa ccaagacggc
      361 gatcaccttc cccggcatcg gcacggaaac cttctgccgc ccttgaagct cgagaccgcc
      421 ctgggtgccg ccgacgcgca cgcgccgctc atcgactaga ttgatgtggt aattgcgacc
      481 gtcgaccagc acccggtact catcatcggc gctgtcgacc tcgatctcga aggagcggtt
      541 gtcaacaatc agtgaatagt tggttcggcc ggtttttttg ccgtcgacga caaactgatt
      601 gccgtccacc gacacccggt agaccgactt tccggtctcc tcgatttcca cggtaaagct
      661 ttgatcgccg agtttgccga taaacgccat agtctagttc tctaacgccg ccagccgcgg
      721 ttgccgggca gggcggaccg gcgcaaggaa gcgcgttgct ggcgccactt ggacggctcg
      781 gctgcgcctt ttgccagcaa gcctaaagtt cgttcctgct cgccgtgcag cgccgcgatc
      841 gccgccgagg cgagcgcgat ttccttatgc ggatagacct cttcattggc cttgggattg
      901 tattcttcgt cgatgaagcc ggtattgaca tcgccggaca tgaaccgggg atggcgcaaa
      961 atccattggt gaaacgagat gttggtcttg atgccgcgca cttgatattc gcgcagcgcc
     1021 cggcgcatgc gcaaaatcgc ttcgacacgg ttctcgcccc aggtgatcag cttggcgatc
     1081 atcggatcat aatagatcga cacttcggcg ccttcataga cgccgttgtc gttgcgcaaa
     1141 cccagaccct cgggcaaacg cagaccttcg atccggcccg ggcatggcat aaagtcgcgc
     1201 tcgggatcct cggcgtaaat ccggcattca atcgcgtggc cggtctgagt aatatggcgc
     1261 tggcgccagg gcaaataacc gccggcggcg atttcgatct gcgccttgac cagatcgatg
     1321 ccgaccaccc gctcggtcac cgcatgctcg acttgcaggc gggtgttcat ttccaggaaa
     1381 taaaagtttt gttgatcgtc tagcaaaaat tccaaggttc cggcgccgac gtagccgacg
     1441 gcacgggcgc cttgaatggc gatccggcca atgcgccggc gcgtgcgatc ctccagcccg
     1501 gggccaggcg attcttcgat aactttctgg tggcgccgct ggatcgaaca ctcgcggtcg
     1561 tagagatgaa tcacccggcc atagctatcg gcgagtacct ggatctcgac atgacgcggc
     1621 ttgacgatga acttttcgac gtataggcgc gggtcgccga aggacgactt ggcttccgaa
     1681 ccgacggca
//
LOCUS       DATIRS010000958         4463 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_367600, whole genome shotgun sequence.
ACCESSION   DATIRS010000958 DATIRS010000000
VERSION     DATIRS010000958.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4463)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4463)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4463
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_367600"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1092
                     /locus_tag="VLM90_12115"
     CDS             <1..1092
                     /locus_tag="VLM90_12115"
                     /inference="COORDINATES: protein motif:HMM:NF013670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HSQ13764.1"
                     /translation="RVMLELSHDAQYEVRLLKDDPAKGIPPRMYVDIRGARLALNSKE
                     PVPVPVDDRLLRQVRVGQYSAEVVRVVLDLTSLRDHNAFMLPDPHRLVIDLHGQQTPE
                     RAAVKEEAAKGEKSPRLNGSRDNKATRPLGNATGIHKIVIDPGHGGKDPGAIGVGGIM
                     EKDLVLSIAKKLAHKLKNEMGVEVVLTRDDDRFVALEDRTHRANAEDADLFISLHTNA
                     SANGEARGVETYYLNNTSDEAALRLAARENGGARKPISDLQFILSDMTQNMKLEDSIS
                     LAHRLQQSMVGGMTKAVGEVRDLGVKTALFYVLVGARMPSVLVEMFFVTHRVEGPAMS
                     REDNQDAMANSLFEGIQKYGQSIAIAKPL"
     gene            1101..3821
                     /gene="glnD"
                     /locus_tag="VLM90_12120"
     CDS             1101..3821
                     /gene="glnD"
                     /locus_tag="VLM90_12120"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: protein motif:HMM:TIGR01693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0018177 - protein uridylylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HSQ13765.1"
                     /translation="MDAVAISLALLQDSQVEVNLKALGRSYLERGRRILFERHRQGAG
                     GMEVAAAYSTVMDHIIRYLFSSLGAELLPRFRGQGGGLALIAQGGYGRGELSPYSDID
                     LIFLHNGRVNPFVQALNERLLHTLWDLGLAVGPATRTISDCVRLGESDMKIRTALLDT
                     RFLCGDFSLFGEFSKTLDNKLLKKGIGRFVREKLNESIVRHKTYGGSVYLLEPEVKEG
                     LGGLRDVQTARWIARAQLKVKELDGLVNHGVISAADVVGLKESQDFLLRVRNEMHFAT
                     GKHQDQLTFEQQEKVSEALGFQSEGTLRGVEVFMRVYYLHAMQICRISDLIVHRVTDC
                     DKPRFSDKLAFGRTLREGVRISKGHLTLTKPEVLKNDPSNLIRLFDDGQKYRCRLSHE
                     TRELLRGHIELIDEEFRCSAAANQPFFAILEWKDSVYETLLEMHRSGVLGAFIPEFGR
                     LLCMVLHDAYHTYTVDEHSLMLIQEIERLRAGNYEATLPLLTQVAREAEKIELLYLGM
                     MFHDIGKGFGGGHSEVGANMVRPIARRMGLNADDGALVEFLVRHHLLMTHTALRRDLE
                     DEKTIFEFAKTMGSVNNLKMLYLLTFADVKAVGPDVWNPWKGSLLGELYVKTLNLLEE
                     AEKGEFPRADVRAVLQRIQGRVRRQLLALPQPEAKVDDFIDAMPDRYFLSTSEAEIPK
                     HFALMEKFRGKGALSYVEHFPERNCSSVIICTQDRPGLFASITGVLTSLNLDILNARI
                     FTASDGRILDVFRISHRGRPELVMADAKWAKFKTVLDNVLDGNSDVVRLVEAAKPSLY
                     LLKRAPKVSTVINIDNRVSDDFSVVEIFTDDRIGVLFTIAHNLHRLGLSIHVAKISTN
                     VDQVADVFYVTESSGEKIAGAERVEEVRSSLFQSLAPENVTNERLAESVH"
     gene            3784..>4463
                     /locus_tag="VLM90_12125"
     CDS             3784..>4463
                     /locus_tag="VLM90_12125"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HSQ13766.1"
                     /translation="MLPTNDSLSPYIDSFLSMLAVEKGLAKNTLDAYSRDLAGLSGFL
                     IGQKVCDWRDVDTIHIRAYVGALRAKGLSPKSVARHVVTLRRLLRFLQTENLLKENPM
                     PTLLPTPGQRKLPQTLSAADIQSLLNQPDANEPLGARDQAMFELLYATGLRVSELVLL
                     QTHQVNFQGKYVIVKGKGAKVRAVPFGNYAREKLNAFMTDGRRRLLKGKLSPFVFINR
                     SGRPLSRQG"
BASE COUNT          935 a         1263 c         1313 g          952 t
ORIGIN      
        1 cgtgtcatgt tggagctatc gcacgacgcc caatacgaag tgcgcctgct caaggacgat
       61 cctgccaagg gcataccgcc gcgcatgtac gtcgatatcc gcggcgcgcg cttggcgctg
      121 aactcaaagg agccggtgcc ggtgccggta gatgatcgtc tgttgcgtca ggtgcgcgtc
      181 ggccaataca gcgctgaggt cgtgcgcgtg gtcttagatc taaccagcct gcgcgatcac
      241 aatgcgttca tgctgcccga ccctcatcgt ttggtgatcg atttacacgg gcagcagacg
      301 ccggagcgcg cagccgtcaa ggaggaggcc gccaaagggg aaaaatctcc ccgtctcaat
      361 ggttcgcgag acaataaggc gacccggccg ctgggtaacg ctactggcat tcacaagatc
      421 gtcatcgatc cgggccatgg cggtaaagat cccggtgcca taggcgtcgg tggtattatg
      481 gagaaagact tggtgttgag catcgctaag aagctcgccc ataagctcaa gaatgaaatg
      541 ggcgtcgagg tggtcttgac ccgcgatgac gaccgcttcg ttgccttgga ggaccgcacc
      601 catcgggcta acgccgagga tgccgatctg tttatttcgt tgcatacgaa cgccagcgcc
      661 aatggcgaag cgcgcggcgt cgagacctat tatctcaaca acaccagcga tgaagcggcg
      721 ctgcggctgg cggcgcgaga gaacggcggc gcgcgcaagc cgatctccga tttgcaattt
      781 atccttagcg acatgaccca gaacatgaag ctcgaggatt cgatctcgct agcgcaccgc
      841 ttgcagcagt cgatggtcgg cggcatgacc aaagcggtcg gcgaggtgcg cgacctcggc
      901 gtcaagacgg cgctatttta tgtcctggtc ggcgcgcgca tgccgagcgt cttggtggag
      961 atgtttttcg tcacccatcg cgtcgaggga ccggcgatga gccgtgagga caatcaagat
     1021 gccatggcca actcgctgtt cgaaggcatt cagaaatatg gtcagtcgat cgccatcgcc
     1081 aaaccgctat aatatcaatc atggacgcag tcgctatttc attagcctta cttcaagaca
     1141 gtcaggtcga agtcaacctc aaagcgctgg gccggagcta tctggagcgt ggccggcgca
     1201 ttttgttcga gcgccatcgt cagggcgccg gcggcatgga agtcgcagcg gcctactcga
     1261 cggtgatgga tcatatcatc cgctatttgt ttagctcctt gggcgctgaa ctcctgccgc
     1321 gctttcgcgg ccaggggggc gggctggctt tgatcgctca aggggggtat ggccggggcg
     1381 aactaagtcc ttattccgac atcgatttaa tatttttgca caatggtcgg gtcaatccgt
     1441 ttgtccaagc gctcaacgaa cgcttgctgc acacgttgtg ggatttgggt ttggcggtcg
     1501 ggcccgcgac gcgcaccatc tccgattgcg tgcgcttggg cgaatcggac atgaagattc
     1561 gcacggcatt gcttgacacg cgctttctct gtggcgattt ttcgctgttt ggcgaattca
     1621 gcaagaccct cgacaacaaa ttgctcaaga agggaatcgg ccgattcgtt cgtgagaagc
     1681 tcaatgaaag cattgtccgt cacaaaacct atggcggatc ggtctatttg ctcgaacccg
     1741 aggtcaaaga gggtttgggt ggattacgcg atgtccagac cgcccgctgg atcgcccgcg
     1801 cacaacttaa ggtcaaggaa ttggacggtc tcgtcaatca cggcgtgatc agcgcagccg
     1861 acgtggtcgg tctcaaggag tcgcaggatt ttcttctgcg agtgcgcaat gaaatgcact
     1921 ttgccaccgg caagcatcag gaccagctga ccttcgagca gcaagaaaaa gtcagcgagg
     1981 ccttgggctt tcagagcgag ggaacgctgc gcggcgtcga agtgtttatg cgcgtgtact
     2041 acttgcacgc catgcagatt tgccggattt cggatctgat cgtgcaccgg gtcaccgact
     2101 gcgacaagcc gcgcttcagc gacaaattgg ccttcggccg taccctgcgc gaaggcgtgc
     2161 gcatttcaaa aggtcatctc accctgacca aacccgaggt gctcaaaaac gatccgagta
     2221 atttgatccg cctgttcgat gatgggcaga aatatcgctg ccgcttgagc catgagaccc
     2281 gcgagctact gcgcggccat atcgaattga tcgacgagga gtttcgctgt tcggcggccg
     2341 ccaaccagcc gtttttcgcg attctcgaat ggaaagattc cgtctatgag acgctcttgg
     2401 aaatgcatcg ctcgggcgtg ctcggcgcgt tcatcccgga attcggccgc ttgctgtgca
     2461 tggtgttgca cgacgcctat cacacctaca cggtggatga gcattctctc atgctgattc
     2521 aagagatcga acggctgcgc gccggcaact acgaagcgac gctgcctttg ctgacgcaag
     2581 tggcgcgcga ggcggaaaag atcgagctgc tctacctggg catgatgttc catgacatcg
     2641 gcaagggttt cggcggcggt cattcggaag tcggcgccaa catggtgcgc ccgatcgcac
     2701 ggcgcatggg gcttaatgcc gatgatggcg cgttggtgga gtttctcgtg cgccaccatc
     2761 tgctcatgac ccacaccgcc ctgcggcgcg acctggagga cgagaaaacc atttttgaat
     2821 tcgcgaaaac catgggtagc gtcaacaact tgaagatgct ctatctcctg accttcgccg
     2881 atgtcaaagc ggtggggccg gatgtttgga atccttggaa gggttcgctc ctgggcgagc
     2941 tctatgtaaa aactttgaac ctcctcgaag aagccgagaa gggcgagttc ccgcgcgcag
     3001 acgtgcgcgc cgtcttgcag cgcatccaag gccgcgtccg gcgccaattg ctcgcgctgc
     3061 cacaacccga ggccaaggtc gatgatttta tcgacgccat gcccgaccgg tatttcctct
     3121 ccacctccga ggctgagatc cccaagcact ttgctttgat ggagaagttt cgcggtaaag
     3181 gcgcactctc ctatgtcgaa catttccctg aacgtaactg tagctcggtg ataatctgca
     3241 cccaggaccg gcccggcctg ttcgcctcca tcaccggcgt cttgacctcg ctcaacctcg
     3301 atattctcaa cgcgcggatc tttaccgcca gcgacgggcg cattctcgac gtcttccgta
     3361 tctcgcatcg gggccggccg gaactggtca tggccgatgc gaaatgggcc aagttcaaaa
     3421 ccgtcttgga caatgtgttg gatggcaata gcgatgtcgt ccgcctggtc gaagcggcca
     3481 aaccttcgct ttacctgctc aagcgcgcgc ccaaggtatc cactgttatc aatatcgaca
     3541 accgcgtatc ggatgatttt tctgtcgttg agatttttac cgatgatcgg atcggcgtgt
     3601 tgtttaccat agctcataac ttgcatcggt tgggactgtc gatccatgtc gctaagatct
     3661 cgaccaatgt cgatcaagtg gccgatgtct tttacgtcac cgagagctcg ggcgagaaaa
     3721 tcgccggggc cgaaagggtc gaggaagtca gaagctcgct tttccaaagt ctggcgccag
     3781 agaatgttac caacgaacga ctcgctgagt ccgtacattg actcgttcct ctcgatgctc
     3841 gccgtcgaga aggggctggc gaagaatacc ctcgatgctt acagccgcga tctcgccggg
     3901 ctgtcgggct ttctgatcgg gcaaaaggtt tgcgactggc gcgatgttga cacgatccat
     3961 attcgcgcct acgtcggcgc gctgcgcgcc aagggtctga gtccaaagag cgtggcgcgc
     4021 catgtggtga cactgcgccg gttattgcgc ttccttcaga ccgaaaacct gctcaaggaa
     4081 aatcccatgc cgacgctctt gccgacgccg ggacagagaa agctgccaca gacgctctcg
     4141 gcggcggaca ttcaaagctt gctcaaccag ccggacgcca acgaaccgct gggcgcccgc
     4201 gaccaggcga tgttcgagtt gctctacgcc accggcctac gggtgtcgga gttggtgcta
     4261 ttgcagacgc accaggtcaa tttccaaggc aaatatgtca tcgtcaaagg caagggagcg
     4321 aaagtgcgcg ccgtgccgtt cggcaactat gcgcgcgaaa agctgaacgc cttcatgacc
     4381 gatggccggc ggcgattact caaggggaaa ttgagcccct ttgtcttcat caaccgttcc
     4441 ggcagaccgt tgagccggca agg
//
LOCUS       DATIRS010000959         2850 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_170213, whole genome shotgun sequence.
ACCESSION   DATIRS010000959 DATIRS010000000
VERSION     DATIRS010000959.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2850)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2850)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2850
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170213"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..848
                     /locus_tag="VLM90_12130"
     CDS             <1..848
                     /locus_tag="VLM90_12130"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13767.1"
                     /translation="QRPKETADFNDIARVKREWFGATNDGLLTMGFASRGAGDTPPEV
                     YRKEWASARGLGLPITQHAGRSLAEIKRFRRIEMLYNDKLLGPDVQLIHTYSASERER
                     AMMAETKVHNSIAPYTASRLASGLPYLGELLKRGVQCSLSVDTTTVGGNADMFSIMRL
                     MLQLNHLRSMDVMEVQPRRILELATLDGAKDLGIADRTGSLTPGKRADLILVRTNDIN
                     VAPFINPALLLVQQASPFNVDTVVIDGRILKHKGELVAIDTEEVINKAAEAFHAARKR
                     AGGPY"
     gene            920..1393
                     /locus_tag="VLM90_12135"
     CDS             920..1393
                     /locus_tag="VLM90_12135"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSQ13768.1"
                     /translation="MPLHVKSQDVPIRKGVRTGVEGEGSMTSVKGYGNECSLMIATRA
                     PGYHTTPHTHECEQLNYIQEGEIWFFVEDQGFSCGKGDFQRIPANKVHWAWNRSDKDA
                     VVIEAHAPGLVGLKAASGAVALFDDGEAAQLKKPGINEFVTYDAQSIEKKYFERG"
     gene            1407..2399
                     /locus_tag="VLM90_12140"
     CDS             1407..2399
                     /locus_tag="VLM90_12140"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13769.1"
                     /translation="MRRRTQLSLLVGILIGTLPVRLLAQELLRVPYGVTTSLQHLPVL
                     VGKDSGLFAKQGLNVEPIHIRGGALITTMIMGGTVQFSGAGAESVVSARIEGGDVALI
                     ACPADTDVVYFVARPEFKTGQSLKGKSSAVTRLGSTTHFYLRAALRSLGLDPEKDMTI
                     LQLGGGSEIVTAMRSGRVAAAALPYRNTYSLIQSGWPLLVDQSTANFVYPSSCVATSR
                     TYIKNNPAIVERFLKAYVEATRLIKKDSALVEQVIKKWHRETDAAFIKKTVEVYARIF
                     KPIPYVSDQGLDIVVKEIAGRRPVAKEFFGRPELFRDHGPLDKLVKDGSIERGP"
     gene            2492..2644
                     /locus_tag="VLM90_12145"
     CDS             2492..2644
                     /locus_tag="VLM90_12145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13770.1"
                     /translation="MPVFSSDPMRGRVKSLYQVFMSAGTYVGHARIGMAATFRGCLRR
                     PDRQCG"
     gene            complement(2641..>2850)
                     /locus_tag="VLM90_12150"
     CDS             complement(2641..>2850)
                     /locus_tag="VLM90_12150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13771.1"
                     /translation="QWKIEPDIAEKSYQVMIKTFSANGSASDSAIENVIQQTLKANKS
                     QKQVIHAQVANLAFLEDAQKELGLR"
BASE COUNT          630 a          842 c          803 g          575 t
ORIGIN      
        1 agcaacggcc caaggagacc gccgacttca acgatatcgc gcgggtcaaa cgcgaatggt
       61 ttggcgccac caacgacgga cttctcacaa tgggcttcgc ctcccgcggc gccggcgaca
      121 cgccgccgga ggtctatcgt aaagaatggg cgagcgcccg cggccttgga ttgccgatca
      181 cccagcatgc cgggcggtcg ctcgccgaga tcaaacgttt tcgccgcatc gagatgctct
      241 acaacgacaa gcttctgggc cccgacgtcc agctgattca tacttacagc gcgtctgaac
      301 gagaacgcgc catgatggcc gagaccaagg tgcataatag catcgcaccc tacaccgcct
      361 cgcgcttggc ctctggactg ccctacctcg gcgagttgtt gaaacgcggc gtgcagtgca
      421 gcctgtcagt cgacacgacg acggtgggcg gcaacgccga catgtttagc atcatgcgct
      481 tgatgttgca gttgaatcac ctgcgctcga tggacgtgat ggaagttcag ccgcgaagaa
      541 tcttggaact ggcaaccctc gacggtgcca aggacttggg catcgccgac cgcaccggct
      601 cgctgacgcc gggcaagcgc gccgatttaa ttttagtcag aaccaacgac atcaacgtcg
      661 cgccgttcat caatccggcg cttctactag tccagcaggc cagtcctttc aacgtcgaca
      721 cggtcgtgat cgacggcaga atcctcaaac acaaaggcga actagtcgct atcgacaccg
      781 aagaggtgat taataaagcg gctgaagcct tccacgcggc cagaaagaga gccggcggcc
      841 catactgatc gaacagttaa acgtcagcga agtgatcgcg gaaagccgtt gaaaatcaaa
      901 tccaggagcg gaaaacacaa tgccactaca tgttaagagt caggacgtgc cgataagaaa
      961 aggggttcgg accggagtcg aaggcgaagg ctccatgacc tcggtcaaag gctatggcaa
     1021 cgaatgcagt ctgatgatcg ccacgcgcgc tccaggctat cacaccacgc cccataccca
     1081 cgagtgcgag cagctcaatt acatccaaga gggggagatt tggttttttg tcgaagacca
     1141 gggattcagc tgcggcaaag gagacttcca acgcatcccg gcgaacaaag tccattgggc
     1201 gtggaatcga tccgataaag acgccgttgt gatcgaagcc cacgcgcctg ggctcgtcgg
     1261 gctcaaggcc gccagtggcg ccgtggcatt gttcgacgat ggcgaagcgg cgcagttgaa
     1321 aaagcccggc atcaatgaat ttgtcaccta tgacgctcag tcaattgaga aaaaatactt
     1381 cgagcgtggt tagatcgacc ttgccaatgc gcagacgcac acagctctcg ttgcttgtcg
     1441 gtatcctcat cggcaccttg ccggtccggc tgttggccca ggaactgctg cgcgttccct
     1501 acggcgtgac cacatcattg cagcatctgc cggtgctcgt cggtaaagac agcggtctgt
     1561 tcgccaagca ggggctcaac gtcgagccca ttcatattcg cggcggcgcg ctgatcacga
     1621 ctatgatcat gggcggcacc gtacagttct ccggcgccgg agcggagtcg gtagtatcgg
     1681 cgcgcatcga aggcggcgac gtcgcgctga tcgcctgccc cgccgatacc gatgtggttt
     1741 attttgtcgc ccggccagaa ttcaaaaccg ggcaaagcct caagggcaag agcagcgccg
     1801 tcacccggct cggttccacg actcatttct atttgcgcgc ggcgctgcgc tccctgggac
     1861 tggacccgga aaaagacatg acgattctcc aattgggcgg cggcagcgaa atcgtcacgg
     1921 cgatgcgcag cggcagagtc gcggcggcgg cgctccccta ccgcaatact tacagtctga
     1981 ttcaatccgg ctggcctctc ttggtcgatc aatcgacggc caatttcgtc tatccatcgt
     2041 cctgcgtggc cactagccga acttatatca agaacaatcc ggcgatcgtc gagcgttttc
     2101 tcaaggccta tgtcgaagcg acgcggctaa tcaagaaaga cagcgccttg gtcgaacagg
     2161 tcattaagaa atggcaccgt gaaaccgacg ccgcctttat caaaaagacc gtcgaagttt
     2221 acgcgcggat ttttaagccc atcccctacg tttccgatca agggttggac atcgtggtca
     2281 aagagatcgc cgggcggcgc ccagttgcca aagagttttt cggcagaccg gaactgttcc
     2341 gtgatcacgg tccattggac aaactcgtca aggacggctc catcgaacgc ggtccataac
     2401 gcggcaacgg gcgttaggag taagtaagta gtcaggctct cccggattcc ggattcctca
     2461 ctctttactc ctaattacct actgttcgat gatgccggtg ttcagttccg acccgatgcg
     2521 cgggcgggtg aaaagcttgt atcaagtctt catgtccgcc ggcacctacg tggggcacgc
     2581 ccggatcggc atggcggcga cctttcgcgg ctgtctccgg cgccctgatc gccaatgcgg
     2641 ttagcgcagc cccaactctt tttgcgcgtc ttcgagaaaa gccaggttgg ccacttgggc
     2701 gtggattacc tgcttctgcg acttgttggc cttgagcgtt tgttgaatga cattttcaat
     2761 cgcgctgtcg ctcgccgagc cattggcgct gaacgtcttg atcatcacct gataactctt
     2821 ttcggcgata tccggttcga tcttccactg
//
LOCUS       DATIRS010000960         1878 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1351190, whole genome shotgun sequence.
ACCESSION   DATIRS010000960 DATIRS010000000
VERSION     DATIRS010000960.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1878)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1878)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1878
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1351190"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..619
                     /gene="lpxI"
                     /locus_tag="VLM90_12155"
     CDS             <1..619
                     /gene="lpxI"
                     /locus_tag="VLM90_12155"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: protein motif:HMM:NF017989.4"
                     /note="LpxI, functionally equivalent to LpxH, replaces it
                     in LPS biosynthesis in a minority of bacteria; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase LpxI"
                     /protein_id="HSQ13772.1"
                     /translation="GVTQAVMAGGIRKIRLFGNFRPDLRGARFLATMKSREDDALLRG
                     IADELAAEGIDILESTLCLSHIVATDGVLTKRAPRPEEWDDIKLGFRMAREIGQLGIG
                     QTVVVKNQVVVAVEAVEGTDAAIQRGGILAKSGCVVVKVSKPHQDLRFDVPAIGVDTI
                     NSMHEIAGAALAVEAGKTILLEKERMLALANDYGIAVVGVGSEDA"
     gene            619..1548
                     /locus_tag="VLM90_12160"
     CDS             619..1548
                     /locus_tag="VLM90_12160"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HSQ13773.1"
                     /translation="MAGERVTTAVIGVGYLGRFHAEKYAASEKAKLVGVVDVDRQRAD
                     EIGASVGAPAFSDYRQLFGRVQCVSIAVPTRSHYRVARDFIDAGVDVLVEKPLTADIG
                     EARELVAAAQAKGVIMQVGHLERFNPAIRRLESVIKEPKFVEFHRLAPFVERGTDVDV
                     VLDLMIHDIDVIASLVRAPVERVEAVGVSVLTDKPDIANARITFANGCIANVTSSRVS
                     LKRERKVRFFQPDAYISIDYDQRRAQIFHKPAPGAGWLDIRAENIEIADGDALADEID
                     SFLDCVRTRTVPLVGGAEGLRALEIASLISAQL"
     gene            1582..>1878
                     /locus_tag="VLM90_12165"
     CDS             1582..>1878
                     /locus_tag="VLM90_12165"
                     /inference="COORDINATES: protein motif:HMM:NF014714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13774.1"
                     /translation="MPKQVMLVVGEDSGDMHGARLVQELHKRDAALKVFGVAGEQLRR
                     TNFEALFNVSRLTGMGLVELAGNLKNLWQAYHLLRRALRERRPSLLVLIDFPDFN"
BASE COUNT          377 a          508 c          615 g          378 t
ORIGIN      
        1 cggggtgacc caggcggtga tggcgggtgg catccggaaa atcaggttat tcggtaactt
       61 ccgtcccgat ctgcgcggtg cgcgtttctt ggccacgatg aagagccggg aagatgacgc
      121 gctcttgcgc ggcatcgccg acgagctcgc tgccgagggc attgacatcc tcgaatcgac
      181 gctttgcttg tcccacatcg tcgccaccga cggtgtttta accaagcgtg cgccgaggcc
      241 ggaagagtgg gatgatatca agcttggctt tcgcatggcc agagaaatcg gccaactcgg
      301 catcggtcag accgtcgtgg tcaagaatca agttgtggtc gccgtggagg cggtggaagg
      361 aaccgatgcg gcaattcaaa gaggcgggat cctggccaag tcaggctgcg tcgtggtcaa
      421 agtcagcaag ccgcaccagg atctgcgttt cgacgtgccg gccatcggcg tggacacgat
      481 caacagcatg catgaaatcg ccggcgccgc gctggcggtg gaagccggca aaacgatcct
      541 cttggaaaag gagcgaatgc tcgctctggc taatgactac ggcatcgctg tagtaggcgt
      601 gggtagcgag gacgcatgat ggcgggtgaa cgggtcacta cggcggtgat cggcgtcggt
      661 tatctcggca ggtttcacgc ggagaaatac gcggcctctg aaaaggccaa gctcgtcggt
      721 gtcgttgatg tggatcggca gcgcgccgac gagatcggcg catcggtcgg cgcgccggcg
      781 ttctcggact atcgtcagct attcggccga gtacagtgcg tcagtatcgc cgtgccgacg
      841 cgctctcatt atcgcgtagc gcgcgatttc atcgacgccg gagtggacgt gttagtcgaa
      901 aagccgctaa cggcggacat cggtgaggca agagagttgg ttgccgccgc gcaggccaag
      961 ggcgtaatca tgcaggtagg tcatttagaa cgcttcaatc ccgcgattcg gcggctggaa
     1021 agcgtcatca aagagcccaa atttgtcgaa ttccatcgcc tggcgccgtt cgtcgagcgc
     1081 ggtaccgatg tcgacgtcgt gttggacctc atgattcatg atatcgacgt gatcgcaagc
     1141 ctggtgcggg cgccggtgga gcgggtcgaa gcggtgggag tctcggtgtt gaccgataag
     1201 ccggatatcg ccaacgcacg gatcaccttt gccaacggtt gcatcgccaa cgtgacatcg
     1261 agccgggtct cgctcaagcg cgagcgcaag gtccggttct ttcagccgga cgcgtatatt
     1321 tccatcgatt atgatcagcg ccgggcgcag atttttcaca agccggcgcc gggcgccgga
     1381 tggctggata tccgcgctga aaacatcgaa atcgcagatg gcgatgcctt ggccgatgag
     1441 atcgactctt ttctcgactg cgtacgcacg cggacagtgc cgttagtcgg cggcgccgaa
     1501 ggattgcgcg ccctggaaat cgcttcgttg atcagcgcgc agctttgagc cgagcggcgg
     1561 agtcaaccga aagagttgct gttgccaaaa caagtcatgc tcgtggtcgg tgaagactcg
     1621 ggggatatgc acggcgctcg tttggtgcag gagctacaca aacgggatgc ggcgctcaaa
     1681 gtattcggcg tcgccggcga gcaactgcgg cggaccaact ttgaggcgct cttcaacgtt
     1741 tccagattga ccggcatggg cttggtggaa ttggcgggca atctcaagaa tctctggcaa
     1801 gcataccatc tattgcgacg cgcgttacgc gaacgccgcc cgagcctgtt ggtcttgatc
     1861 gacttcccgg atttcaat
//
LOCUS       DATIRS010000961         5576 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_563981, whole genome shotgun sequence.
ACCESSION   DATIRS010000961 DATIRS010000000
VERSION     DATIRS010000961.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 5576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5576
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_563981"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(232..1515)
                     /locus_tag="VLM90_12170"
     CDS             complement(232..1515)
                     /locus_tag="VLM90_12170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13775.1"
                     /translation="MSKPEKIERERPEIIPPIPLKVESTGLDFGFLADLALKTVYADA
                     NCTTERAADRLKLAMPVVEELLQHLYREKFLEVRGLISYGNNRYSMLDRGWQRAQHLL
                     GLNGYIGPAPVSLSDYTYSVLQQSAARDTIHPASVRDAMANLVLPDSSVQTLGLVASS
                     RRSLFMTGPAGNGKTTIAMALHQAQQGEIWIPYAIEIDGQVIKVFDLHNHQPVECSEI
                     GRYDERWVRIKRPIIVVGGEMTIETMDLIYSQTVRFYEAPFQMKSNGGTLVIDDFGRQ
                     RVDPHDLLNRWIVPLEGKVDYLTLHTGKKIEVPFEQLLIFATNLDPDDLVDDAFLRRM
                     GYRLYVNPPDKEMYARIFQQYVESNGFGYDAKHLDFVYRLYDADKRPLRACEPRDLML
                     RCADHCKYENLPKTLSNEIILLAWKNYFGALPTLE"
     gene            1732..1953
                     /gene="rpmE"
                     /locus_tag="VLM90_12175"
     CDS             1732..1953
                     /gene="rpmE"
                     /locus_tag="VLM90_12175"
                     /inference="COORDINATES: protein motif:HMM:NF000612.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HSQ13776.1"
                     /translation="MKAGIHPEYKAAKVTCACGNIAETRSTVGNIHVEICSNCHPFFT
                     GKQKLVDTAGRVEKFRKKYGMQNESPAEG"
     gene            2116..3171
                     /gene="prfA"
                     /locus_tag="VLM90_12180"
     CDS             2116..3171
                     /gene="prfA"
                     /locus_tag="VLM90_12180"
                     /inference="COORDINATES: protein motif:HMM:TIGR00019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HSQ13777.1"
                     /translation="MLDKLLEVEKRYMELEGMMSDPHLVGQQREYKKVAKERSDLEEI
                     VTCYREWRKVEQEIVDNRQLMEENDEAMRELVKDELASLRERKEALETKLKFLILPKD
                     PNDAKNVIVEIRAGTGGDEAALFAAELSRMYSRYAESRGWRVELMSSSPTGLGGYKEI
                     ILSIEGQGAYSRLKFEGGVHRVQRVPVTEGSGRIHTSTVTVAVLPEADEVELVIDPKE
                     IRIDVFRSSGPGGQSVNTTDSAVRITHIPSGIVISCQDEKSQHKNRAKGMKILRARLL
                     EKKQDEQASEIAASRKSMVGSGDRSERIRTYNFPQGRLTDHRINLTIYQLERVMEGQI
                     DEVVEGLITHYQAEALK"
     gene            3181..4092
                     /gene="prmC"
                     /locus_tag="VLM90_12185"
     CDS             3181..4092
                     /gene="prmC"
                     /locus_tag="VLM90_12185"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: protein motif:HMM:TIGR00536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HSQ13778.1"
                     /translation="MEGLANIANDKVSRRLGDALLQSVARLGAAGSDSPRLDSEVLLA
                     HCLNLSREQLLVASELPIAPATARRFESLLARRLQREPVAYITGKQEFWSRDFAVTPD
                     VLIPRPDTERLVEVSLLCAAQFPASTLLRIADLCTGSGAVAVCLAGELPSAQIYATDI
                     SSAALTIARGNAEAHKVARRIQFFAGDLFDALVPRSEGRFDLIVSNPPYVRHGEIVTL
                     APEVSRWEPRVALDGGIDGLDVYRRIAAAAPGYLAERGALVLEVGADMASEVSAICAD
                     TGRYREIEVFQDYAGRDRVIVARLGKH"
     gene            4105..5373
                     /gene="murA"
                     /locus_tag="VLM90_12190"
     CDS             4105..5373
                     /gene="murA"
                     /locus_tag="VLM90_12190"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: protein motif:HMM:NF006873.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HSQ13779.1"
                     /translation="MDKIVIQGGQRLHGEVAVSGSKNAALPILISSLLTTERCTYQSV
                     PHLADIRTTLRLLAGLGGKSEHQRWREGADELTLQADSIDNFEAPYDLVKTMRASFLV
                     IGPLVARFGRARVSTPGGCAIGARPIDLHLKGLEALGAIIEQTHGYVEARALKLRGAK
                     IYLDVPSVGATENLMMAASLAEGTTVIENAAKEPEIDDLAKVLNAMGGQVHGAGSDVI
                     TIDGVNALHGVSHRIIPDRIEAGSFVIAAALSGGEVYVKGARADHLEAFLIKLREAGV
                     GWTSDDGGIHVRGGGRIKSVDVKTQPYPGFPTDLQAQMMVLMAVADGVSVITETIFEN
                     RFMHVPELDRMGADIKLEGNRAVVRGVKALSGAPVMASDLRASVALVLAGLVASGSTE
                     VARVYHLDRGYEQIEKKLSQLGAQINRVAG"
BASE COUNT         1147 a         1482 c         1750 g         1197 t
ORIGIN      
        1 taggtgggaa tgacggcatc aaacggggtt atcaggtctt aagctggacg tattcacgtc
       61 ctatattgtg cgattttgtc tatacgatgt ttcgccgagc gacacgaaaa ttgaaatagt
      121 ctgatcctaa ttttcatgtg gttggtgcct ttcgtggcta attctacggt tgcggctgtg
      181 cgctgatcgg cgcaccgctt tccctcggcg cagctgggaa accctgtcct gctattccag
      241 cgtcggcaac gcgccaaagt agtttttcca agccaggaga attatttcgt tggaaagggt
      301 ttttggcaga ttctcgtact tgcaatgatc ggcgcagcgt agcattaggt cgcgcggttc
      361 gcaggcgcgt agcggccgtt tgtcggcgtc gtagagccga tagacgaaat cgagatgctt
      421 ggcgtcgtag ccgaagccgt tggattcgac atattgctgg aaaattctgg cgtacatctc
      481 cttgtccggc ggattaacgt agaggcggta gcccatgcgc cgcaggaagg catcgtcgac
      541 caggtcgtcg gggtccaggt tggtggcgaa gatcagcaac tgctcgaagg gcacttcgat
      601 ctttttgccg gtatggagtg tgagatagtc gaccttgcct tcgaggggta cgatccagcg
      661 gttgagtaga tcgtggggat cgacccgttg ccggccaaag tcgtcgatga ccagtgtgcc
      721 accgttggat ttcatctgaa acggtgcttc gtagaagcgt acggtttgac tgtaaatcaa
      781 atccatcgtc tcgatggtca tttcgccgcc gacaacgatg attggccgct tgatcctgac
      841 ccagcgctcg tcgtatcggc caatttcgct gcattctaca ggttggtgat tgtgcagatc
      901 gaagactttg atcacctggc catcgatctc gatggcgtag gggatccaga tctcgccttg
      961 ttgggcttga tggagcgcca tggcgatggt ggttttgcca ttgccggcgg ggccagtcat
     1021 gaacagactc cgtctggagc tggccaccag gccgagggtt tgcacgctgc tatccggtaa
     1081 caccaagttg gccatcgcgt cgcgcacgct ggcagggtgg atggtatcgc gcgccgcgct
     1141 ttgctgcagc acggagtagg tgtagtcgga cagcgatacc ggcgccgggc cgatgtagcc
     1201 gttgagcccc aagagatgct gggcgcgctg ccagccgcgg tcgagcatgc tgtagcggtt
     1261 gttgccgtag ctgatcagtc cgcgcacctc aaggaacttt tcgcgatata gatgttgcag
     1321 cagctcttcc accaccggca tggcgagttt cagcctgtca gcggcgcgct cggtggtgca
     1381 gttggcgtcg gcgtagacgg ttttcagcgc caggtcggca agaaagccga aatcaaggcc
     1441 ggtgctttca acttttagcg ggatgggcgg aatgatctcg ggtcgttctc tttcaatttt
     1501 ctctggcttg ctcatagttt gtctgcccct tagcttttga tacggccggt tagcgttttg
     1561 atatcacaaa cgaggttatg ctttgcattt tattggctta tgggttttta cgcaatccgg
     1621 tttattaaat gagggatatc cgcgagaatc gctcactcaa cgctgtcctg acacagcaat
     1681 tgaagcgctc cggacgatat gttataaacc cacaccattg agaggtaaat tatgaaggca
     1741 ggaattcatc cagagtataa ggcggctaaa gtaacttgcg cgtgcggcaa tatcgccgaa
     1801 acgcgctcga cggtgggtaa tatccacgtg gaaatttgct ccaattgcca cccttttttt
     1861 accggtaagc aaaaattggt cgacaccgcc ggccgagtcg aaaagttcag aaaaaaatac
     1921 ggcatgcaga acgaaagtcc ggcggagggc tgaggcggca ttcgaaccat taacgtttta
     1981 cgcgactagg aagggcaaag ggcaggttcg taaccctttg ccctttttta tttgccatga
     2041 atgcagttgc cgaagcgacc aactcccttg accgtcgccg gcactgatag tccggccgtg
     2101 aagtgatacg cagttatgct tgataaatta ctcgaagtcg aaaagcgtta catggagctc
     2161 gaaggcatga tgtccgaccc gcatttggtc ggccaacagc gcgagtataa gaaggtcgcc
     2221 aaggagcgct ccgatctcga agagatcgtc acctgctatc gtgagtggcg caaggtcgag
     2281 caagagatcg tcgacaaccg ccagctcatg gaggaaaacg acgaagcgat gcgcgagctg
     2341 gtgaaggacg agttggcgag cctgcgcgag cgcaaagagg ccctcgaaac caagctcaag
     2401 tttctcattt tgcccaaaga tcccaacgac gcgaagaacg ttatcgtcga gattcgcgcc
     2461 ggtactggcg gcgacgaggc ggcgctgttt gccgcggagc tgtcgcgcat gtactcgcgc
     2521 tacgccgagt cgcgcggttg gcgcgttgag ctgatgagtt ccagccccac gggtctgggc
     2581 ggctataaag aaatcatcct cagtatcgaa ggccagggcg cttacagccg gctcaaattc
     2641 gagggcggtg tgcaccgcgt ccaacgcgtg ccggtgaccg aaggttcggg acgcattcat
     2701 acgtcgacag tgaccgtcgc ggtgttgccg gaagcggacg aggtggaact cgtcatcgat
     2761 cccaaagaaa tccgcatcga tgtgtttcgc tcgtcgggac cgggcggcca gagtgtcaac
     2821 accaccgact cggcggtgcg cattacccat attccctcgg gcatcgtgat ttcctgccag
     2881 gatgaaaaat cgcagcataa aaaccgcgcc aaaggcatga agattttgcg cgcgcgcttg
     2941 ttggaaaaga agcaggacga gcaggcatcg gagatcgccg cgtcgcgtaa atccatggtc
     3001 ggcagcggcg accgcagcga gcgcatccgc acctataact ttccccaggg gcgcctgacc
     3061 gatcaccgga tcaatttgac gatttaccag ctagagcgcg tgatggaggg gcagatcgat
     3121 gaagtggtcg aaggcttgat cacccactat caggcggaag cgctcaagta agcagcggcg
     3181 atggaaggcc ttgccaacat agccaacgat aaggtttcgc ggcgcctggg cgacgcgctc
     3241 ttgcaaagtg ttgcgcgtct gggcgccgcc ggcagcgaca gcccgcgtct cgatagcgaa
     3301 gtactgctag cgcattgttt gaacttgagc cgcgagcaat tgctggttgc cagcgaattg
     3361 ccgatcgctc cagcaacggc gcgccgtttt gaatctttac tagcgcggcg cttgcagcgg
     3421 gagccggtgg cgtacatcac cggcaagcag gagttttggt cccgcgattt cgcggtcacg
     3481 ccggatgtgt tgattccgcg gccggatacc gagcgcttgg ttgaagtttc actattatgc
     3541 gccgctcagt tcccggcttc gaccttgctt cggatcgctg acttgtgcac tggcagcggc
     3601 gcggtggcgg tctgtttggc gggcgagtta ccatcggcac aaatttacgc caccgatatt
     3661 tcgtccgcag cgctgaccat cgcccgtggc aacgctgaag cccataaggt agcgcggcgt
     3721 atacaatttt ttgccggcga tctgttcgac gcgctggtgc cgcgatcgga gggtcgtttc
     3781 gatttgatcg tcagcaatcc accttatgtg cgacacggcg agatcgtaac gctggcgccg
     3841 gaagttagcc ggtgggagcc gcgtgttgcg ttggacggcg gtatcgatgg cttagatgtt
     3901 tatcgtcgga tcgccgctgc ggcgccgggt tatctagccg agcggggtgc gctggtgttg
     3961 gaggtcggcg ccgatatggc aagcgaggtt tcggcgattt gcgccgatac cggacgctat
     4021 cgagagatcg aagtgttcca ggattacgcc gggcgcgacc gtgtgattgt ggcgcgactt
     4081 ggtaagcact agggaaccca gcaagtggat aagatcgtca tacaaggcgg ccagcggttg
     4141 cacggcgagg tcgccgtcag cggttcgaag aacgcggcgc tgccgatttt aatctcgtcg
     4201 ctgctcacca ccgagcgttg cacttaccaa agcgtgcccc atctcgccga tattcgaacg
     4261 actttgaggt tgctcgcggg gctcggcggc aagagcgagc accagcgctg gcgcgaaggc
     4321 gccgacgagc taaccctgca agctgatagc attgacaact tcgaagcgcc ctacgacttg
     4381 gtcaagacca tgcgcgcgtc gttcctggtc attggcccgt tggtggcgcg cttcggccga
     4441 gcgcgggtgt cgacgccggg cggctgtgcc atcggcgcgc gccccatcga cctgcatttg
     4501 aaggggctcg aagcgctcgg cgccatcatc gagcagactc acggttatgt cgaagcgcga
     4561 gcgctaaaac tgcgcggcgc aaaaatttat ttagacgtgc cgtcggtggg cgcgacggaa
     4621 aatctaatga tggcggcgtc cttggccgag ggcacgacgg tgattgaaaa tgccgccaag
     4681 gagccggaga tcgacgactt ggcgaaagtg ttgaatgcca tgggcgggca agttcatggc
     4741 gccggcagcg acgtgatcac gatcgacggg gtgaacgctt tgcatggggt aagccaccgg
     4801 ataattcccg accgcatcga agccggcagc tttgtcatcg ccgcggcgct cagtggcggg
     4861 gaggtctacg tcaaaggcgc gcgcgccgac catctcgaag cttttttaat caaattgcgt
     4921 gaagccggcg tgggttggac gagcgacgat ggcggcatcc atgtgcgcgg cggtggccgg
     4981 atcaagagtg tcgatgtgaa gactcagccg tatcccggtt ttcccaccga cttgcaggcc
     5041 cagatgatgg tgctgatggc ggtggccgac ggtgtcagcg tgattaccga gacgattttt
     5101 gagaaccgct tcatgcatgt gccggagctc gaccgcatgg gtgccgacat caagctcgaa
     5161 ggcaaccgcg ccgtggtgcg cggcgtcaaa gcgctgtccg gcgcgccggt tatggcgagc
     5221 gacttgcgcg ccagcgtcgc cctggtactc gccggcttgg tcgccagcgg tagcaccgaa
     5281 gttgcccgcg tttatcatct cgaccgcggc tacgaacaga tcgaaaaaaa gctttcgcaa
     5341 ctgggcgcgc agattaatcg cgtggccgga taaggccgtt caaagttcaa gggttcaaaa
     5401 gttcaaggtc agaaaaattc gcagtagcta tgaaaattcg actggttaaa actgccgacg
     5461 ccggtttcaa gcccttactg gcgaagatcc tcgggcggcg cggcactcgg gccggcgatg
     5521 tcgagcagcg cgtcgatgaa attgtcacga cggtgcagcg ccagggcgac cgcgcc
//
LOCUS       DATIRS010000962         2788 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_72227, whole genome shotgun sequence.
ACCESSION   DATIRS010000962 DATIRS010000000
VERSION     DATIRS010000962.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2788
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72227"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(136..1407)
                     /locus_tag="VLM90_12195"
     CDS             complement(136..1407)
                     /locus_tag="VLM90_12195"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ13780.1"
                     /translation="MVDKLTSRLGGMFYGWRMVAVGCSMRMLGGGFHLYGFTIFFLPI
                     TQELGLSRAATSAVFSLARAEGAIEGPLAGYMIDRFGPRPMMLAGVILSGLGYMLLAG
                     VDSYAALLAVYLGVISLSFSAGFMHSPMVLANSWFIRRRAFAMTLISSSIGIGGTLIT
                     PLLAFAVQAWGWRWGAFLAGVGLIVIGVPIALFAKRSPESMGLLPDGVQPQADAPATG
                     GGHAQQSDEQADEGEFTVRQAMRTTAFWMLILATTTRVGVFNAITVHFVPIMVWKGAS
                     EQHAAAMLAAMALMSLPSHLFIGWIADRVSKPLLMAVCMIIGAVSVAFLAYGNDLWSL
                     WLFTLLITFVEAIFPVSWATVGDFFGRKSFATIRGTMSFFYLWGPALGPVITGAVYDR
                     HQSYAPLMSAYIVTFLITAGLYALLRKPAAL"
     gene            1694..2698
                     /locus_tag="VLM90_12200"
     CDS             1694..2698
                     /locus_tag="VLM90_12200"
                     /EC_number="1.1.1.41"
                     /inference="COORDINATES: protein motif:HMM:TIGR00175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005962 - mitochondrial isocitrate
                     dehydrogenase complex (NAD+) [Evidence IEA];
                     GO_component: GO:0045243 - cytosolic isocitrate
                     dehydrogenase complex (NAD+) [Evidence IEA];
                     GO_function: GO:0004449 - isocitrate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0006102 - isocitrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate dehydrogenase (NAD(+))"
                     /protein_id="HSQ13781.1"
                     /translation="MKHRITLIPGDGIGPEVTKPTLEIIKSAGVKIEWETHLAGAEAL
                     KKHGTTIPKSLIESFEKNRVARKGPVTTPVGEGFASVNVVLRKSFDLYANLRPIKNLP
                     GVPARYQGVDLIVVRENTEGLYSGIEHEVVPGVMESLKIITEKASTKIAKFAFGFAKK
                     YRRKKVAAVHKANIMKLTDGLFLDCAKNVAKHYKSIGFSDIIVDNACMQLVLNPLQFD
                     ILLLENLYGDIVSDLAAGLVGGLGVVAGANLGDAHALFEPVHGSAPDIKGKNIANPTA
                     MIQAAVMMLHHVAENEAANKISAALETVLLKGEALTPDLGGTATTKKFAAAIIQEVER
                     "
BASE COUNT          673 a          775 c          852 g          488 t
ORIGIN      
        1 aagaaaatgc tcgagccata gtaatccaga gcgccggcaa cgatgcgcac ggcggaccga
       61 tggcgaccat ccaccaaccg taatagattt tccggatcct tctatgaaac caagcaaaca
      121 tatgcggcgc aatttctaca aggcagcggg cttgcgcagc agggcgtaca gaccggcggt
      181 gattaagaag gtgacaatgt aggcggacat caagggcgcg taggactgat ggcgatcgta
      241 gaccgcgccg gtgatcaccg gtccgagggc cgggccccat agatagaaaa aactcatcgt
      301 gccgcgaatc gtcgcgaagg acttgcgtcc gaagaaatcg ccgacggtgg cccagctcac
      361 cggaaagatc gcctcgacga aggtgatcag caaggtaaac aaccagagcg accagaggtc
      421 attaccatag gcgagaaagg cgaccgacac cgcacctatg atcatgcaga ccgccatgag
      481 caacggtttg ctcacgcgat cggcgatcca gccgataaac aagtgcgacg gcaggctcat
      541 cagcgccatg gccgcgagca tggctgcggc gtgctgctcg gaggcgcctt tccataccat
      601 gatcggaacg aagtggacgg tgatggcgtt gaaaacgccg acccgggtgg tcgtcgccag
      661 gatcagcatc cagaatgcgg tggtgcgcat cgcttggcgg acggtaaact cgccctcgtc
      721 cgcttgttcg tcgctttgct gtgcgtgacc gccgcccgtt gccggtgcat ccgcctgcgg
      781 ctggacgcca tcaggcaaga gtcccatgct ttccggcgag cgtttggcaa ataacgcgat
      841 cggcacgccg atcacgatta acccgacgcc ggccaagaaa gccccccagc gccagcccca
      901 ggcttggacc gcgaaggcga gcagcggcgt gatcaatgtg ccgccgatgc cgatggagct
      961 gctgatgagc gtcatggcga aagcccgtcg gcggatgaac cacgagttcg cgagaaccat
     1021 cggcgagtgc atgaagccgg cggagaacga cagcgagatc acgcccagat agacggccaa
     1081 taaagcggcg tagctatcaa caccggcgag gagcatgtag ccaaggcctg acaagatcac
     1141 cccggcgagc atcatcggcc ttgggccgaa gcgatcgatc atgtagccgg cgagaggccc
     1201 ttcgatggcg ccttcggcgc gcgccaggga aaagaccgcc gaagtggcgg cgcggctgag
     1261 tcccaattct tgtgtgatgg gcaaaaagaa aatcgtgaag ccgtagagat gaaaaccgcc
     1321 gccaagcatg cgcatgctgc agccgacggc gaccatccgc cagccgtaaa acatgccgcc
     1381 gaggcggctc gtgagtttgt caaccatcgg tgacggctcg ttgcggtgaa agccggacgg
     1441 cggatcgggg aaggcgttgg tcaggcttcg taatccttgt caaattaact agagagagcg
     1501 gcgctgtcaa cgcgctggct ccgcgcgtag cgcttcagtc tgatctcaac ggcgcaaaaa
     1561 tgtgggggca cgtccctgta tatgcctccg gtcggcgact aacgcacagc gcgagactgt
     1621 gaagctgcca attgcatttc gatggtgtat aaaaaggaca gactggcgca cactccgaga
     1681 aaggccttac tccatgaagc atagaataac cctgataccc ggtgacggca tcggccccga
     1741 ggtgaccaaa ccgacgctgg agatcattaa atcggccggt gtaaaaattg agtgggaaac
     1801 tcatctcgcg ggagcggaag cgctgaagaa gcacggcacg acgattccga aatcgttgat
     1861 agaatctttc gaaaaaaatc gcgtcgcgcg gaagggaccg gtaacgaccc cggtgggcga
     1921 gggcttcgca agcgtcaacg tggtgctgcg caagagcttt gatctttacg cgaatctgcg
     1981 gccgataaaa aaccttccgg gcgtgcccgc gcgctatcag ggcgtcgact taatcgttgt
     2041 ccgggaaaat accgaagggc tctactccgg catcgaacac gaagtcgtgc cgggggtgat
     2101 ggagagcctc aaaatcatca cggagaaagc ttcgacgaag atcgcgaaat tcgctttcgg
     2161 cttcgccaaa aagtaccggc gcaagaaagt cgccgcggtg cacaaagcca acatcatgaa
     2221 gctcaccgac ggtcttttcc tggactgcgc aaaaaatgtt gcgaagcatt acaagagtat
     2281 cggtttcagc gacattatcg tcgacaatgc atgtatgcag ctggttctga accctctcca
     2341 gttcgatatt ttgctgctgg agaatctcta cggcgatatc gtgtcggacc ttgcggcggg
     2401 tttggtcgga ggtcttggtg tggtcgccgg agccaatctc ggcgatgccc atgcgctctt
     2461 cgagccggtg cacggtagcg cgccggatat caagggcaaa aatatcgcca acccgaccgc
     2521 gatgattcag gccgcggtga tgatgctcca tcatgttgcg gaaaatgaag ccgcaaacaa
     2581 aatttccgca gcgctggaga cggtcttgct gaagggtgag gcgctgactc ccgacctggg
     2641 tggcacagcg acgacgaaaa aattcgccgc cgcgatcatc caggaggtgg aaagatagtg
     2701 gcggcagcgc tgaccggcgg ctgtgtatac atctctccca gtactccaac ctccattact
     2761 ccagtctgat tggagtgttg gagagatc
//
LOCUS       DATIRS010000963         1505 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1843163, whole genome shotgun sequence.
ACCESSION   DATIRS010000963 DATIRS010000000
VERSION     DATIRS010000963.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1843163"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            139..690
                     /locus_tag="VLM90_12205"
     CDS             139..690
                     /locus_tag="VLM90_12205"
                     /inference="COORDINATES: protein motif:HMM:NF013923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HSQ13782.1"
                     /translation="MKKNLNLNVNGQEYEVEVEANRLLLQVLRDTLDLTGTKEGCSIG
                     VCGACSVIIDGRLVSSCLTLAAGCVGKKIETIEGLAKDGKLHPLQQAFIEYGGFQCGI
                     CTPGQIMAAKALLDENAKPSEEEVKEWMSGNLCRCTGYYKILESVMAVVDGKTDPDYA
                     FRKRETTAKIQSLDVYKPVAKTS"
     gene            826..>1505
                     /locus_tag="VLM90_12210"
     CDS             826..>1505
                     /locus_tag="VLM90_12210"
                     /inference="COORDINATES: protein motif:HMM:NF013482.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSQ13783.1"
                     /translation="MSKSANFSVVGKRVQRVEGFDKVTGDSKFIADIHLPGMLTGRIL
                     RSPYPHARIRAIDTSKAEKLRGVRAVVTAEDTLKRPWGAFFADQYILSVGKSRYVGEE
                     VAAVAAIDPDIAEEALDLIEVDWQPLPGVFDAEEAMLDGAPLVHDDKPNNIAMHLDLE
                     RGNIAQAFADSDIVVEDTFTSMPQWHCSIETIGSVVEYSPNGKYTIYMNTQTLFNARY
                     RIATALGVP"
BASE COUNT          355 a          439 c          415 g          296 t
ORIGIN      
        1 cgatgttcat cctcacgatc gtgatgttgg cctggcccta tttacggttt tacaaagtgc
       61 ggtgagatca ttagtcgatg cagtagactt cggcgatttg attgacactg gcacattccg
      121 tagatattct gcgcgccaat gaaaaagaat cttaatttga acgtcaacgg ccaggagtac
      181 gaggtcgaag tcgaagccaa tcgcttgctg ctgcaagtgc tgcgcgacac tctcgatctc
      241 accggcacca aagagggttg cagcatcggc gtgtgcggcg cgtgcagcgt cattatcgac
      301 ggccgcttgg tcagttcttg cctcaccctc gccgccggct gcgtaggcaa aaagatcgaa
      361 acgattgaag gtttggccaa agacggcaag ctccatccgc tccagcaggc gtttatcgaa
      421 tacggcggtt ttcagtgcgg catctgcact cccggtcaga tcatggccgc caaagccttg
      481 ctcgacgaaa acgccaaacc cagcgaagaa gaagtcaagg aatggatgtc gggcaacctg
      541 tgccgctgca cggggtatta taaaattctt gaatcggtga tggcggtggt cgatggcaag
      601 accgatcccg actacgcgtt tcgcaagcgc gaaaccaccg caaagattca gagcttggac
      661 gtttataaac cggttgcgaa aaccagctga tacatctcga agggataatg tctcgcgcca
      721 agtgcgcaaa gaacgccaag ttcggaaagg taccaataag ttttcccttg ctcccttggc
      781 gtgctcggcg cgagatagtc cgagaaaaca gcgagccgat taaccatgtc taaatcagca
      841 aacttctccg tcgtcggcaa gcgcgtgcag cgcgtcgagg gcttcgacaa agtcaccggc
      901 gattcaaaat tcatcgcgga tatccatctg cctggcatgc ttaccggcag aatcctgcgc
      961 agcccctacc ctcacgcgcg catccgcgcc atcgacacca gcaaggcgga gaagctgcgc
     1021 ggcgtgcgcg ccgtggtcac cgctgaagac acccttaaac gtccctgggg cgcgttcttc
     1081 gccgaccaat atattctatc cgtcggcaag agccgctatg tcggcgaaga ggtcgcggcg
     1141 gtggcggcca tcgatccgga tatcgccgag gaagcgctgg atttgatcga ggtggattgg
     1201 caaccgttgc cgggagtgtt cgacgccgag gaagcgatgc tcgacggcgc gccactggtg
     1261 cacgacgaca aacccaacaa catcgccatg catctagatc tcgaacgcgg caacatcgct
     1321 caagccttcg ccgactcgga cattgtcgtc gaggacacct ttaccagcat gccgcagtgg
     1381 cactgctcca tcgaaaccat cggcagcgtg gtcgaatact cgcccaacgg caaatacacg
     1441 atctacatga acacccagac gttgttcaac gcgcgctacc gcatcgccac ggcgctcggc
     1501 gtacc
//
LOCUS       DATIRS010000964         1940 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1450075, whole genome shotgun sequence.
ACCESSION   DATIRS010000964 DATIRS010000000
VERSION     DATIRS010000964.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1940)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1940)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1940
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1450075"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..626
                     /locus_tag="VLM90_12215"
     CDS             <1..626
                     /locus_tag="VLM90_12215"
                     /inference="COORDINATES: protein motif:HMM:NF013645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13784.1"
                     /translation="NDYFGKGLSGGKVILYPPEGSTFAPEENIIVGNVAFYGATNGEA
                     YIRGMAGERFGVRNSGVRAVVEGVGDHACEYMTGGRVVVIGQTGRNFAAGMSGGIAYV
                     LDEDGTFKGRCNFETVSLERLDDRDLQEVEELLKRHAVYTRSARAWQLLALWQETAAK
                     FVKVMPRDYRRVLEALQEAESKGLVGDDALMAAFEANKNDAARVSGN"
     gene            675..>1940
                     /locus_tag="VLM90_12220"
     CDS             675..>1940
                     /locus_tag="VLM90_12220"
                     /inference="COORDINATES: protein motif:HMM:TIGR01317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HSQ13785.1"
                     /translation="MGKPTGFMEYERELPQDRLPLERVKDWNEFHEHFSEDKLRQQGA
                     RCMDCGIPFCHTGQLISGMASGCPVNNLIPEWNDLVYRGLWKEALERLHKTNNFPEFT
                     GRVCPAPCEGSCVLGLNELPVTIKNIEAAIIDNGFAQGWVIPEAPKKRTGKKVAVIGS
                     GPSGLACAAQLNRAGHLVTVYERADRIGGLLMYGIPNMKLDKQIVQRRIDLMAAEGVK
                     FVIKTEIGVDIPAAKLKDDFDAVVVCTGATKARDLPIPGRELKGIYMAMEFLRANTKS
                     LLDSRHQDGDYISAKDKHVIVVGGGDTGTDCVGTSMRHGCKSLTQLEILPRPPDTRQP
                     DNPWPEWPKVYKLDYGQEEVAARFGADPRVYLTTGEKFVGDQNGNVKELHVYDVEWAR
                     NEQGAFIPKRVPGSEKILQADLVLLAMGFL"
BASE COUNT          422 a          533 c          610 g          375 t
ORIGIN      
        1 ccaacgatta ttttggcaag gggctttcgg gcggcaaggt gattttgtat ccgccggaag
       61 gttcgacgtt cgcgccggaa gaaaatatca tcgtcggcaa cgtggcgttt tatggcgcga
      121 ccaatggcga agcttatatc cgcggcatgg ccggcgagcg cttcggcgtg cgtaacagcg
      181 gcgtacgcgc ggtggtcgaa ggcgtcggcg atcacgcctg cgagtatatg accggcgggc
      241 gcgtcgtagt gattggccag accggacgga acttcgccgc gggcatgtct ggaggcattg
      301 cctatgtgtt ggacgaggac ggcactttca agggccgctg taattttgaa accgttagcc
      361 tcgaacggct cgacgaccgc gatttgcagg aagtcgaaga gttactcaag cgccacgcag
      421 tctatacgcg tagcgcacgc gcttggcagc ttctcgcgct atggcaagag actgcggcca
      481 aattcgtcaa ggtgatgccg cgggattacc gtcgcgtgct cgaagcgttg caggaggccg
      541 aatcgaaagg gctggtcggc gacgacgccc tgatggcagc cttcgaggcc aataagaacg
      601 acgcggcgcg cgtgagcggc aactgatacg ggaacgcggc attggatagc ggatggcgag
      661 gagcagttag aacgatgggt aaaccgacag gctttatgga gtacgagcgg gaactacccc
      721 aggatcgttt gcccctcgaa cgggtgaaag actggaatga gtttcacgag cacttctccg
      781 aggacaaact gcggcagcag ggcgcccgct gcatggattg cggtattccg ttctgtcata
      841 cgggccaact gatcagtggc atggcctcgg gatgtccggt caataatttg attccggaat
      901 ggaacgatct cgtttatcgc ggtctatgga aagaagcgct ggagcgcttg cacaagacca
      961 acaacttccc cgaattcacc ggccgggtct gtccggctcc ctgcgaaggt tcctgcgtgc
     1021 tcggtctcaa cgaattgccg gtgacgatca aaaatatcga ggccgcgatc atcgacaacg
     1081 gtttcgccca aggatgggtg atccccgagg cgccgaaaaa gcgcaccgga aagaaagtcg
     1141 ccgtgatcgg ttcgggccct tccgggcttg cctgtgcggc acagcttaat cgcgccggtc
     1201 atctggtgac ggtttacgag cgcgccgacc gcatcggtgg actgctcatg tacggtatcc
     1261 ccaacatgaa actcgacaag cagatcgtcc agcggcgcat cgatctgatg gccgccgagg
     1321 gcgtcaagtt cgtgatcaag acggagatcg gcgtggatat tccggcggcg aaactgaagg
     1381 atgacttcga tgccgtggtg gtctgcaccg gcgcgaccaa ggcgcgcgat cttccgattc
     1441 cgggccgtga actcaaaggc atttacatgg ccatggaatt tctccgcgcc aacaccaaga
     1501 gcttgctcga ctcacggcac caggatggcg actatatttc cgctaaggac aagcatgtaa
     1561 tcgtggtcgg tggcggcgac accggcacgg actgcgtcgg cacatcaatg cgccacggct
     1621 gcaagagttt gacccaattg gaaatattgc cgcgaccccc cgacacgcgc caacccgaca
     1681 atccctggcc cgaatggccc aaggtttaca aactcgacta cggtcaggag gaagtggcgg
     1741 cccgcttcgg cgccgatccg cgcgtttatc tcaccaccgg cgagaagttt gtcggcgatc
     1801 agaatggcaa tgtcaaagag ctccacgttt atgacgtcga gtgggcgaga aacgagcaag
     1861 gcgctttcat cccgaaacga gtgccgggtt cggagaagat cttgcaagcg gatcttgttc
     1921 tgctcgccat gggcttccta
//
LOCUS       DATIRS010000965         1853 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1843189, whole genome shotgun sequence.
ACCESSION   DATIRS010000965 DATIRS010000000
VERSION     DATIRS010000965.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1853)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1853)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1853
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1843189"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1853
                     /locus_tag="VLM90_12225"
     CDS             <1..>1853
                     /locus_tag="VLM90_12225"
                     /inference="COORDINATES: protein motif:HMM:NF012873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="condensation domain-containing protein"
                     /protein_id="HSQ13786.1"
                     /translation="CISSGEALSATLAEQFQKTSPDCKLINLYGSSEVAGDVTCYEAN
                     DQPPEAGIPIGRPIHNTQIYLLDSRLDPVPVGVGGELYVGGDNLAGGYLHRPELTAEK
                     FIANPFNGKKKSRLYRTGDLARYRADGNIGFMGRADSQVKIRGCRIELSEIEATLCRH
                     PAVRECVVVLSADSQGESPNPKPVLSEVEGSKSGPADENPKSAKFLTAYVVTGESAPS
                     TGELRTFLKQKLPEFMVPASFVMLDAIPLLPNGKVDRQSLPPLRERSFAADRTRTEPR
                     TEIEALVAQLWRETLNLDLLGVGDNFFELGGHSLLAAQVVAKLRAAIGREVSIRDLFA
                     APTVAGLAEIMEKRIGAEPKADLPPITAGPRQRLFPLSLSQERLFSFAQLFGGGDFLN
                     MPYAYRLTGPLQAPALSRAIEEIARRHEALRTGFSETDDGPRQFVRRSVDVKLPLVDL
                     SRLAPDDRDERLDELSRDDAGQCFDLERPPLIRVKLLRLAAEQHVLLVTMHHIITDQW
                     SMAVFRNELAVLYQAFSQGLPSPLPDVPIQCRDFGAWQRQILSNGLLSRQISYWRDRL
                     SERPACIDFRRGARRRSGARFHSSRTPIEIDDDLFKTLKSFAGAAACTPFM"
BASE COUNT          359 a          528 c          566 g          400 t
ORIGIN      
        1 ctgcattagc agcggcgagg cgctttcggc gacactcgcc gagcagtttc agaagacctc
       61 gcccgattgc aaactgatca atctgtatgg ctcgtcggag gttgctgggg acgttacttg
      121 ctatgaggcc aacgatcagc ctcctgaggc tgggattccc atcggccggc ccattcacaa
      181 cacgcagatt tatctgcttg actctcgtct agacccggtt cccgtcggcg taggtggcga
      241 gttgtacgtc ggcggcgaca atctggcggg cggctatctt catcggccgg aattgaccgc
      301 ggaaaaattt attgcgaatc cgttcaacgg caagaaaaag tcgcgtctct atcggaccgg
      361 cgacctggcg cgctatcgcg ccgacggcaa tatcgggttc atgggtcgtg cggacagcca
      421 ggtgaaaatt cgtggctgcc ggatcgaatt gagcgagatc gaggcaaccc tctgccgtca
      481 tcccgcggtt cgcgagtgtg tggtcgtttt gagcgcggat tcgcagggcg agtcccccaa
      541 tccaaaacct gtcctgagcg aagtcgaagg atccaaaagc ggccccgcag acgaaaatcc
      601 aaaatcggcc aagttcctaa ccgcctatgt cgttaccggc gaatcggcgc cgtcgaccgg
      661 tgagctacga actttcctaa agcagaagct tcccgaattc atggtgcccg caagcttcgt
      721 gatgctcgac gcgattccgc tgttgcccaa cggcaaagtc gatcggcaga gcctgccgcc
      781 gttgcgggag cgcagtttcg ctgcggatcg gacaaggacg gagccgcgca ctgagatcga
      841 agcgttggtg gcgcaactct ggcgcgagac tttgaacttg gatttgctcg gcgtcggcga
      901 taatttcttc gagctcggcg gccattcgct tttggccgcc caagtggtgg cgaagctccg
      961 tgcggcgatt ggtcgtgagg tgtcgattcg agatcttttc gcagcgccga cagtggccgg
     1021 tctggcggag atcatggaga aacgtatcgg cgcagagcct aaggcggact tgccgccgat
     1081 caccgctggg ccgcgccaac gattattccc gttgtcgctg agccaggagc ggttgttttc
     1141 gttcgcgcaa ctatttggcg gcggtgattt tctcaatatg ccctacgctt accgcctcac
     1201 cggaccactc caggcgccgg cattgagccg ggccattgag gagatcgctc ggcggcacga
     1261 ggctttacgc acggggttta gcgaaacaga tgacgggccg cgccagttcg ttcgccgcag
     1321 tgtcgatgtg aaattgccgc tcgtcgatct ctcgcgcctg gcgccggatg atcgggatga
     1381 aagactcgat gagctctcac gcgacgacgc gggacaatgt ttcgatctgg aaagaccgcc
     1441 gctcatcaga gtcaaattgt tgcggctggc ggcagagcaa catgttctgc tggtgaccat
     1501 gcaccacatt atcaccgacc agtggtcgat ggccgtattc cgcaatgaat tggccgtgct
     1561 gtaccaagct ttttcgcaag gattgccgtc gcctctgccg gatgtgccta tccaatgccg
     1621 cgacttcgga gcttggcaac gtcagatctt atccaatggt cttttgtcgc ggcagatctc
     1681 ctattggcga gaccggctca gcgagcgtcc ggcgtgcatc gatttccgcc gtggtgctag
     1741 gagaaggagc ggagcgcgat ttcatagttc gcgtacgccg atcgagatcg acgacgatct
     1801 tttcaagaca ctcaaaagtt ttgccggcgc ggcggcctgc acgccgttca tgg
//
LOCUS       DATIRS010000966         2306 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1548491, whole genome shotgun sequence.
ACCESSION   DATIRS010000966 DATIRS010000000
VERSION     DATIRS010000966.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2306
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1548491"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            54..305
                     /locus_tag="VLM90_12230"
                     /pseudo
     CDS             54..305
                     /locus_tag="VLM90_12230"
                     /inference="COORDINATES: protein motif:HMM:NF018651.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            387..899
                     /locus_tag="VLM90_12235"
     CDS             387..899
                     /locus_tag="VLM90_12235"
                     /inference="COORDINATES: protein motif:HMM:NF023696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3617 family protein"
                     /protein_id="HSQ13787.1"
                     /translation="MKRSVLVVTLLVTAGAAVAATSDMPKRKSGLWEITVSSNSAKGS
                     QTMQQCVDEKSDDMMKNNMAGTEKQSCSKNEFRREGNKLTTESVCKMSGSTATTRGVF
                     TGQFDSAYKADIKSTYEPPLHGMKESSSTMEAKWLGACKPGQKPGDISMPGMPDINMN
                     DMMKNLPKRP"
     gene            1053..>2306
                     /locus_tag="VLM90_12240"
     CDS             1053..>2306
                     /locus_tag="VLM90_12240"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HSQ13788.1"
                     /translation="MTSLPNFMRTMAVTAILGTLSMSAPPTSRSQEKPAPNVQPAPTT
                     VPGRPDIPNAEVAKTLRGVPQPPFATPAEKLQIGQLKMPKGFKLEVYISGIANARSLR
                     IGDKGTVFVSNRQLDKIYAVVERSGKREAKVIASGLDRPNGLAFHNGTLYIGEGTKIS
                     KLERIEDHLDNPGKPVVIYSDLPNHQSHGWKFIAIGPDNKLYINIGAPCNICEPPAEN
                     AQIRRINLDGSGAEVFARGVRNSVGFDWHPITKDLYFTDNGRDWLSEDLPEDELNRVT
                     KVGQHFGFPYCHQGNFTDREMGWGRSCDEFTPPVALMGPHSAALGLRFYTGTMFPREY
                     RNALFIARQGSWNRTRKIGGDIVVAKLNVAGTVKSVHPFITGFLNNNEYWGRPVDVHV
                     MKDGSMVISDDFSGAIYRVTYSPQLA"
BASE COUNT          546 a          737 c          594 g          429 t
ORIGIN      
        1 ctcgatgttc gtcaacggct acttgaccac gcccggccaa gacgcccttc gaggcgaaac
       61 gcgagctgac gccgcaacgc tgcttgaaga cgctctgcct gttccgcttc gtcaatccga
      121 ccaaagagat ccgcgttgcc ggcggccgcg aagtaaactt gcgttcgctg cagccgctaa
      181 gcctttaccc agccaactcg atgttcgtca atggctactt gaccacgccc ggccaagacg
      241 ccaccgacgc gcaccagatg atccgcgatc tgggttttga gctggaccag ccggcagcga
      301 tttagccacc catgcgcctt tgtgagccgg cagagcctgt tttaatacgc cgcttttatt
      361 cgccaattta acgttaggag atcgccatga aacgctccgt tttggttgtc acgctgctcg
      421 ttaccgccgg cgccgctgtc gcagccacct ccgacatgcc caaacgcaaa tccggcctat
      481 gggaaataac cgtgtcgagc aacagcgcca agggcagcca gaccatgcaa caatgcgttg
      541 acgaaaaatc cgacgacatg atgaaaaaca atatggccgg aacggaaaaa cagtcctgct
      601 ccaagaacga atttcgccgc gaaggcaaca aacttaccac cgaatcggta tgcaaaatga
      661 gcggcagcac ggcaacaacc aggggcgttt tcactggtca atttgactcc gcttacaagg
      721 ccgacatcaa atcgacctac gagccaccgc tgcacggcat gaaggagtcg tcatcgacca
      781 tggaggccaa atggttgggc gcttgcaagc cgggccagaa gccgggcgat atctccatgc
      841 ctggcatgcc tgacatcaac atgaacgaca tgatgaaaaa cctgcccaag cgaccgtaaa
      901 catccgattg ctatctagcc gtgcgggacc gagctgtccc ccgttgctgg gaaggatgaa
      961 aaacacttac ttgcaatatt tcgacgaaat acctagtttc ttatcgcacc tcgttctaga
     1021 caaaagatac atactatttt aggaggaatc ccatgacttc attgccgaat tttatgcgga
     1081 caatggcagt caccgccatc ctcggaactt tgtcgatgag cgcgccgcca acctcaaggt
     1141 cccaagaaaa acctgcgccc aacgtccagc cggcgccgac cacggtgccc ggccgtcctg
     1201 acattcccaa tgcggaggtg gcgaaaactt tgcgcggcgt accgcagccg ccgtttgcca
     1261 caccggcgga gaaattacag atcggccagc tgaaaatgcc caagggcttc aagctcgagg
     1321 tttacatcag cggcatcgcc aatgcccgct cgttgcgcat cggcgataaa ggcacggtgt
     1381 tcgtcagcaa ccgccaactt gacaaaatct acgccgtcgt cgagcgcagc ggcaagcgcg
     1441 aagctaaggt catcgcctcc ggcctcgacc ggcccaacgg cctcgccttt cacaacggca
     1501 cgctctacat cggcgagggc acaaaaatct ccaagctcga acgaatcgaa gaccacctcg
     1561 acaatcccgg caagccggta gtcatctaca gcgacctgcc caatcaccag tcccatggtt
     1621 ggaagtttat cgccattggt ccggacaaca agctctacat aaacatcggc gcgccatgta
     1681 atatctgcga accgccggcg gaaaatgccc agatccgccg catcaatctc gacggcagcg
     1741 gcgctgaagt gttcgcccgc ggcgtgcgca actcggtcgg cttcgactgg catcctatca
     1801 ccaaggatct ctacttcacc gataacggcc gcgactggct gtcggaagat ttgccggaag
     1861 atgaattgaa ccgcgtcacc aaagtcggcc agcacttcgg cttcccctac tgtcaccagg
     1921 gcaacttcac cgaccgcgag atgggttggg gccgctcctg cgacgaattc accccgccgg
     1981 tggcgttgat ggggccgcac agcgccgccc tcggcctgcg cttctacacc ggcacgatgt
     2041 ttccccgcga ataccgcaac gccctcttca tcgcccgcca gggctcgtgg aaccgcacca
     2101 ggaaaatcgg cggcgatatc gttgtcgcga agttgaacgt cgccggcacg gtaaaatcgg
     2161 tgcatccatt tatcacaggc tttcttaaca acaacgaata ctggggccgg ccggtcgacg
     2221 tccacgtcat gaaggacggt tcgatggtga tctccgacga tttctccggc gcgatctatc
     2281 gcgtcaccta cagcccgcag ctcgcc
//
LOCUS       DATIRS010000967         1616 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1548514, whole genome shotgun sequence.
ACCESSION   DATIRS010000967 DATIRS010000000
VERSION     DATIRS010000967.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1616
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1548514"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..724
                     /locus_tag="VLM90_12245"
     CDS             <1..724
                     /locus_tag="VLM90_12245"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ13789.1"
                     /translation="IALWIIDAPHGGFNAVFFVAMSLVFVGAGAAYMLSREVPPRSRR
                     AEPEPGESWWREIINIFDRHILLAAALLFVLHLSLPCISSFVVLYARQLGITHFGWYY
                     VAIGITSTLARPILGRVSDKIGCGRSLIVAFGLETIALLIMPAVTNLAGIIIAGALWY
                     LGSAIGGAQILALAMESAPVERRGRAMASFSVAFPLSNGVGALLNGLVVDLAGYTWMY
                     VSAAFLCAAGLALTAKHWAALK"
     gene            823..>1616
                     /locus_tag="VLM90_12250"
     CDS             823..>1616
                     /locus_tag="VLM90_12250"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13790.1"
                     /translation="MNIHFRPMILFTLFVSWTLSGRAVEAKEYIAYISDSTNSSSITW
                     IAKEAGIFKKHGLDLDTIFINGSVRGIQSLIAGDLGYSGAVGTAVINAKLAGGDVAIL
                     QSQMNTLPYFIIGNPNIKSPELLKGRAAAVHIPGTSADFAMRLALTKVGINYKDIKAI
                     TVGGAPARLAAVTQGQTDFTVVTDGEKIQGEKLGLKVIIDMAKMNVPFQFNCIVTTRR
                     RIRENPDEARRVVLSMAEAIHFFKTRKEESIKIMAKYTRGLSREIL"
BASE COUNT          319 a          500 c          449 g          348 t
ORIGIN      
        1 tatagcattg tggatcatcg atgcgccgca cggcggtttt aacgcggtgt tttttgtcgc
       61 catgagcctg gttttcgtcg gcgcgggggc cgcctacatg ctgtcccggg aagttccgcc
      121 gcgttcgcgc cgcgcggagc ctgagcccgg cgaatcctgg tggcgcgaga tcatcaacat
      181 cttcgaccgc cacatcctac tggccgcggc gctccttttc gtattgcacc tttcgctgcc
      241 ctgtatttcg agtttcgtcg tgctctacgc acggcaactc ggcatcactc atttcggttg
      301 gtactacgtc gcgatcggga tcacgagcac gctcgctcgg ccgatccttg gccgcgtttc
      361 ggacaagatc ggctgcggcc gttccctcat cgtcgccttt ggcttggaaa ccatcgcctt
      421 gttgatcatg ccggcggtca ccaacctcgc gggcattatt atcgccggcg cgctctggta
      481 tctcggctct gccatcggcg gcgcacagat cctcgccctc gccatggaaa gcgcgccggt
      541 ggaaagacgg ggccgcgcga tggctagttt ttccgtggcc tttcctttga gcaatggcgt
      601 aggcgcgctg ctcaacggcc tggtcgtcga cttggcaggt tacacttgga tgtacgtcag
      661 cgcggctttt ctgtgcgccg cgggactcgc tctaacggct aaacactggg cggctttgaa
      721 ataggatttt taactcagca aagcctcttg cccaggatcg ccgaatgcga taagcgtgac
      781 cgcggcttgc gccgattggc gcagtcaaag gagggcgcct tcatgaatat ccactttcgt
      841 ccgatgatcc tgttcacatt attcgtctcg tggacgttgt ccggccgcgc ggtcgaagca
      901 aaagaataca tcgcttacat ttcggattcg accaattcgt cgtcgatcac ctggatcgcc
      961 aaagaagccg ggatctttaa gaaacacggc ctcgatctcg acactatctt catcaacggc
     1021 agtgtgcgcg gcattcagag cctgatcgcc ggcgatctcg gctacagcgg cgccgtcggc
     1081 acggcggtca tcaacgccaa acttgccggc ggcgacgtcg ctatcctgca aagccagatg
     1141 aacacgcttc cctacttcat catcggcaac cccaacatca aatctccgga gttgctcaaa
     1201 ggccgcgcgg cggcggtgca catccccggc acctcggcgg atttcgccat gcgcctcgcg
     1261 ctcaccaaag tcggcatcaa ctacaaagat atcaaagcga tcaccgtcgg cggcgcgccg
     1321 gccagactcg ccgccgtcac ccaaggtcaa acggatttca ccgtcgttac cgacggcgaa
     1381 aaaatccagg gcgagaagct cggtctgaaa gtgatcatcg acatggccaa gatgaacgtg
     1441 ccgtttcagt ttaattgcat cgtgaccacg cgccgaagaa tccgcgaaaa ccccgacgaa
     1501 gcgcgccggg tggtgctgtc catggcggaa gcgattcact tcttcaaaac ccgcaaagag
     1561 gaatcgatta aaattatggc gaaatacacc cgcggtctgt cgcgcgaaat actgga
//
LOCUS       DATIRS010000968         1622 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_72538, whole genome shotgun sequence.
ACCESSION   DATIRS010000968 DATIRS010000000
VERSION     DATIRS010000968.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1622)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1622)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1622
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72538"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..845)
                     /locus_tag="VLM90_12255"
     CDS             complement(<1..845)
                     /locus_tag="VLM90_12255"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13791.1"
                     /translation="MIRHLVLWGLLAALLFANVAPAESQEKLERMNIGYSAQAGAFAP
                     IWITKEAGLFKKNGLDVNLIFIPGGPTAAASMLAGEVQSVAMAGPAVVSSNLGGTDLV
                     MIAGIVNTFAFQIVTVKSITAPQQLKGKRVGVNRFGTAPDIAARFALRRIGIDPSEVT
                     ILQLGEQSTRLMAMKAGQLDAAILLPPITTMAQREGMNVLMDMSELGAEYQITGLASS
                     QGFITKHRPSAMKLMRAFVEGIHFYKTRKKDSMAIIAKYMRTNDMEAVEATWDYFANK
                     IVPRKP"
     gene            complement(968..>1622)
                     /locus_tag="VLM90_12260"
     CDS             complement(968..>1622)
                     /locus_tag="VLM90_12260"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13792.1"
                     /translation="NTNDHVIELASNFPKSFAGILASLDTSAADLAAVARYAEELVRN
                     PKVVGFKFHPPDQGFYPSDKKFYDIWEILQAGGKPVMFHIGFTVLGANTDGGSGIGLD
                     FGRPIHLDTLAKDFPRMKILAAHPGWPWVEETIGVVTHKKNVYVDTSGYLAEQLPELF
                     QKAIGSRLQDKALFGTDFPYVDLAKALASFDKMGFKDAVKEKLLTGNARNLFGLEKA"
BASE COUNT          335 a          485 c          438 g          364 t
ORIGIN      
        1 ggttttcttg ggacgatctt gttagcgaag taatcccagg tcgcctccac cgcttccatg
       61 tcgttggtgc gcatgtactt ggcgatgatc gccatactgt ctttcttgcg cgtcttataa
      121 aaatgaatgc cttccacaaa ggcgcgcatg agtttcatcg ccgaaggccg atgcttggtg
      181 ataaaaccct ggctgctggc caggccggtg atctggtact ccgcgccgag ctcggacatg
      241 tccatgagca cgttcatacc ttcgcgctga gccatggtgg tgatcggcgg caacaggata
      301 gcggcatcga gttgtccggc tttcatggcc atcagacggg tcgattgctc gccgagctgc
      361 aaaatggtca cctcgctcgg atcgatacca atgcgccgga gagcgaatcg ggccgcgata
      421 tccggcgccg tgccgaagcg gttaactccc accctcttgc ccttgagctg ttgcggcgcg
      481 gtaatgcttt tcaccgtgac gatttgaaaa gcgaatgtat tgacgatgcc cgcgatcatc
      541 acgagatcgg tgccgccaag gttgctgctc accaccgccg ggccggccat cgctaccgac
      601 tgcacctcgc cggccagcat cgaagcggct gccgtcggcc cgcccgggat aaagatcaaa
      661 ttcacatcga gaccgttttt cttgaacagt ccagcctctt tggttatcca gatcggcgcg
      721 aaagcgccgg cctgggcgct gtagccgata ttcattctct ccaatttttc ctgggactcg
      781 gcgggcgcga cgtttgcgaa tagcagcgcc gccaagagtc cccatagtac caaatgtcga
      841 atcactgaat gtcccccagt atccctcgca aaatcctcat atcgatccaa ttgtaggggc
      901 ggacctatgt gtccgcccaa tccggacagg cgaccacata ggtccgcccc tacaagaaca
      961 cccccggtca ggccttctcc aatccgaaaa gattccttgc gttgcccgtc agcagtttct
     1021 ctttcaccgc atccttgaaa cccatcttat cgaaactcgc cagtgccttg gccaaatcta
     1081 cgtagggaaa gtccgtgccg aacaacgctt tgtcttgcag ccggctaccg atcgcttttt
     1141 gaaacagttc cggcaactgc tccgccagat agccggatgt gtcgacgtag acgtttttct
     1201 tgtgggtcac cacgccgatg gtttcctcca cccacggcca gccgggatgg gccgcgagaa
     1261 ttttcatgcg cggaaaatcc ttggccaacg tatcgagatg aatcggccgc ccgaaatcca
     1321 gaccaatgcc gctgccgccg tcggtgttgg cgccgagcac ggtaaaaccg atgtgaaaca
     1381 tgaccggctt gccgccggcc tgtagaattt cccagatgtc gtagaatttt ttatcgctgg
     1441 gatagaatcc ctgatcgggc ggatgaaatt tgaaaccgac gactttggga ttgcgcacca
     1501 gctcttcggc atagcgcgcg accgcggcca aatccgccgc gctggtatcc agcgaggcga
     1561 gaatgccggc gaacgacttc gggaaatttg acgctagttc gatgacgtga tcgttggtat
     1621 tg
//
LOCUS       DATIRS010000969         1711 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1548810, whole genome shotgun sequence.
ACCESSION   DATIRS010000969 DATIRS010000000
VERSION     DATIRS010000969.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1548810"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            60..647
                     /locus_tag="VLM90_12265"
                     /pseudo
     CDS             60..647
                     /locus_tag="VLM90_12265"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
     gene            700..>1711
                     /gene="gatB"
                     /locus_tag="VLM90_12270"
     CDS             700..>1711
                     /gene="gatB"
                     /locus_tag="VLM90_12270"
                     /inference="COORDINATES: protein motif:HMM:TIGR00133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HSQ13793.1"
                     /translation="MKYEPVIGLEVHAQLLTASKIFCGCSTQFGRTPNANTCPICCGF
                     PGVLPVLNKKVVEFAIKAGLATHCQITRSSILARKNYFYPDLPKGYQISQYELPVCSD
                     GHVDFELNGATKRVRLTRIHMEEDAGKNIHDAHGDSSLVDLNRAGVPLLEIVSEPDLR
                     TTEEAGAYLRALRATLQYLGVCDGNMEEGSFRCDANVSIRPAGTETLGTKIEIKNLNS
                     FRAVERALKYEIQRQSETLGDGGTLVQETRLWDEHREETRSMRSKESAHDYRYFPDPD
                     LLPLVIPESWIDEVRAELPELPAARKNRFVSAYGLQPYDAELLTSRKDVADYFDSAVK
                     IHS"
BASE COUNT          403 a          529 c          466 g          313 t
ORIGIN      
        1 ccgaggtaga gcaatcagtc cgggcggcaa tccaccaact ggagaagaac ggcgccaaga
       61 tcgaagagat ctcgctgccg cacaccgaat acgccgtcgc cgtctattac gtcgtcgcca
      121 ccgccgaggc gagttcaaac ctggcgcgat acgacggcat gcgcttcggc cgccgcgccg
      181 acgccaagga cctcaccgag acctacatga ttagccgcga cgaaggcttc ggctcggaag
      241 taaagcggcg catcatgctc ggcacctatg tgctctcggc gggttattac gacgcttatt
      301 atttaaaagc ccagcgtgtg cgcacactga tcaagcaaga tttcgacgca acctttaaac
      361 gttgagatgc gatcgtcacg ccgaccgcgc cgaccacggc attcaagatc ggcgaaaaga
      421 tcaatgaccc gttgcaaatg tatctgtccg acatctacac gatctcgatc aatctggcgg
      481 gcctgccagc gctatcgctg ccctgcggtt ttgacggcga cggcatgccg atcggattgc
      541 agatcgtcgg caaacatttc gacgaagcca ccgtattgcg agcggcgtac gcctacgaac
      601 aggcgaccga gtggcactta aaaaagccgc ggatggaggc tagatgaccg aggatcgcca
      661 tcatccatcc tcgatcttcg atcctcgacg gattaagcca tgaaatacga gcccgtcatc
      721 ggcctggaag tccacgccca gttgctcacc gcgtcaaaga tcttctgcgg ctgctcgacc
      781 cagttcggcc gcacacccaa cgccaacacc tgcccaatct gctgcggctt tcccggcgtc
      841 ctgccggtac tcaataaaaa agtcgtcgag ttcgccatca aagccggtct ggcgacccat
      901 tgccaaataa cccgatcgag cattctcgcg cggaaaaatt atttctatcc cgacttgccc
      961 aaaggctacc agatcagcca gtacgagttg ccggtttgca gcgacggtca tgtcgatttc
     1021 gagttaaacg gcgcaaccaa aagggtgcgc ctgacgcgca ttcacatgga agaagacgcc
     1081 ggcaaaaata tccatgacgc ccatggcgac tcgagtttgg tggatttgaa tcgtgccggg
     1141 gtgccgctgt tggaaatcgt cagcgaaccc gacctgcgca ccaccgaaga agccggcgct
     1201 tatctgcgcg cgctgcgagc gacgcttcaa tacctgggcg tctgcgacgg caacatggaa
     1261 gaaggtagtt tccgctgcga cgccaatgtt tccatccgac ccgccggcac ggaaacctta
     1321 ggcaccaaga tcgaaatcaa gaatctgaat tctttccgcg ccgtcgaacg ggcgctgaaa
     1381 tatgagatcc aacggcagag cgagacgctg ggcgacggcg gcacgttagt tcaagaaacc
     1441 cgcctgtggg acgaacatcg cgaggaaacc cgctccatgc gttcgaaaga atcggcgcac
     1501 gactatcgct acttccccga tcccgatttg ctgccgttgg tgatccccga gagttggatc
     1561 gacgaggtcc gcgccgagct accggaactg ccggcggcgc gcaagaatcg ttttgtcagc
     1621 gcctacggcc tgcagcccta tgacgccgag ctgctcacca gccgcaagga cgtcgccgac
     1681 tatttcgaca gcgcggtaaa aattcacagc a
//
LOCUS       DATIRS010000970         1641 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_270002, whole genome shotgun sequence.
ACCESSION   DATIRS010000970 DATIRS010000000
VERSION     DATIRS010000970.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1641
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_270002"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(50..1078)
                     /gene="ruvB"
                     /locus_tag="VLM90_12275"
     CDS             complement(50..1078)
                     /gene="ruvB"
                     /locus_tag="VLM90_12275"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:NF000868.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HSQ13794.1"
                     /translation="MLDGHRTDEDSGFELSLRPRGFDEYVGQERVKENLKVAIAAARA
                     RGDVLDHILFHGPPGLGKTSIAYIIAREMGVNIKATAGPIIERAGDLAALLTNLDHGD
                     VLFIDEIHRLNHVVEEVLYPAMEDYEIDIMVGQGPAAKSIKLPLKKFTLIGATTRSGL
                     LTSPLRDRFGQSFRLDFYDAVSLARILKRSAAILSVEQDQDGIAEIASRSRGTPRIAN
                     RLLRRVRDYAQVKSDGKITKPVTVEALRMLEVDRLGLDKMDTMLLLAMIDKFAGGPVG
                     VETLAAAIGEEKDTIEDVYEPFLIQAGFIQRTPRGRVATELAYKHFVRQPGAAKPAVG
                     KGQPDLFE"
     gene            complement(1276..>1641)
                     /gene="ruvA"
                     /locus_tag="VLM90_12280"
     CDS             complement(1276..>1641)
                     /gene="ruvA"
                     /locus_tag="VLM90_12280"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00084.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HSQ13795.1"
                     /translation="VSGIGPKLALNILSGIPAEELAKALRNGDQVRLVSIPGVGKKLA
                     ERMIVELKDKFATFTLATLASTAKPEASSQKMQDAVSALINLGYKKPEIEKTVRDVLK
                     NEALSLEDVLRETLQQMGH"
BASE COUNT          309 a          519 c          447 g          366 t
ORIGIN      
        1 ggcttcttcg aaattcctcg gctcattgcc gagcatcagc ttatcgacct cattcaaaca
       61 aatccggctg gcctttgccg acggccggct tggcggcgcc cggttgccgg acaaaatgtt
      121 tgtaggccag ctcggtagcc acccggccgc gcggcgtccg ctgtatgaac ccggcttgga
      181 tcaaaaacgg ttcgtaaaca tcctcgatgg tgtccttctc ttcgccgatg gcggcggcca
      241 aagtctccac gccaaccggc ccgccggcaa acttgtcgat catcgccagc agcaacatgg
      301 tatccatctt atcgaggccc aaacgatcga cctcgagcat cctgagcgcc tccaccgtca
      361 ccggtttggt gatcttgccg tcgcttttca cctgggcgta gtcgcgcacc cggcgcagca
      421 agcggttggc gatgcgcggc gtgccgcgcg agcggctggc gatctcggcg ataccgtctt
      481 gatcttgctc gacgctgagg atcgccgccg aacgtttgag aatgcgcgcc aacgataccg
      541 catcgtaaaa atccagacga aaactctggc cgaagcggtc acgcagtggc gaggtcagca
      601 aacccgagcg cgtggtcgcg ccgatcaaag tgaatttctt tagcggcaac ttgatcgact
      661 tggccgccgg gccctggccg accatgatgt cgatctcgta gtcttccatg gcgggataca
      721 gaacctcttc gaccacatgg ttgaggcggt gaatttcgtc gatgaacaag acatcgccat
      781 ggtcgaggtt ggtcaaaagc gccgccagat cgccggcgcg ctcgatgatc ggccccgcgg
      841 tagccttgat gttcacgccc atctcgcggg cgatgatgta ggcgatggaa gttttgccca
      901 gccccggcgg gccatggaaa agaatatgat cgagcacatc gccgcgcgcc cgcgccgcgg
      961 cgatggccac cttgagattt tctttgaccc gctcttggcc gacgtattcg tcaaacccgc
     1021 gcggccgcaa gctcagctcg aatccggaat cttcgtcagt gcgatggccg tccaacatgg
     1081 tcagtgtgcg ttctccctac aagcccggag ggcgggttta aaccccgcct ctacattcgg
     1141 atgcgatatt ctttgctctt tgcatggctc aagttccttc gcgtccgctc aggaccagct
     1201 ttgccaccaa cctgccgaat cccaaacttt cactctgtga tctctgcatc ctctgtcaaa
     1261 ctgcttctcc gcttcctaat gacccatctg ctgcaaggtc tcgcgtagga catcttccag
     1321 cgacagcgcc tcgttcttga gcacgtcgcg gacggtcttt tcgatctcgg gttttttata
     1381 gcctagattg atcaaggcgg ataccgcgtc ctgcatcttt tgcgacgacg cctcgggttt
     1441 ggccgtgctg gcgagggtcg ccagcgtgaa cgtcgcgaac ttgtccttca attcgacaat
     1501 catgcgctcg gccagtttct tccccactcc tgggatcgat accaagcgta cctggtcgcc
     1561 attgcgtaac gccttagcca attcctcagc cggtatgccc gataaaatat tgagcgctag
     1621 cttggggccg atacccgaca c
//
LOCUS       DATIRS010000971         2288 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_860384, whole genome shotgun sequence.
ACCESSION   DATIRS010000971 DATIRS010000000
VERSION     DATIRS010000971.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2288)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2288)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2288
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_860384"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..896
                     /gene="priA"
                     /locus_tag="VLM90_12285"
     CDS             <1..896
                     /gene="priA"
                     /locus_tag="VLM90_12285"
                     /inference="COORDINATES: protein motif:HMM:TIGR00595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005658 - alpha DNA polymerase:primase
                     complex [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HSQ13796.1"
                     /translation="LCGHVWHCPHCSVTLTLHLRRRMLACHHCDSRRAMSDVCPECKN
                     PSLAPVGTGTEQVEEALRELFPDARVARMDRDTTSKRGSQEALIRRWERGDIDILVGT
                     QMITKGHDVAGVTLVGALSADLSLNLPDFRAAERTFQLLSQVAGRAGRGNDPGRMVIQ
                     TYSPDHYAIQHLPNHDYKGFFAVESEFRQALNYPPFAKLINLRFDGPKAEEVERRAKS
                     VAAQLRRLQVREPKFNAGIEVLGPAAAPIEKLRNRFRWQLLLKGKNSASLLEFANHAR
                     RFSPDGRGGRLQIDVDPYSML"
     gene            910..1452
                     /gene="def"
                     /locus_tag="VLM90_12290"
     CDS             910..1452
                     /gene="def"
                     /locus_tag="VLM90_12290"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: protein motif:HMM:NF001159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HSQ13797.1"
                     /translation="MAILKILKYPEPALKRVASPVRDFGAKTVQLVNDMLETMYAAPG
                     VGLAAPQVGVSQRVVVLDTDHENPGKQVYKLINPVITHAEGSVIWEEGCLSVVDFTAE
                     VKRAAQVQVSAFNEQQKAIKIEAEGLLAVALQHEIDHLDGKLFIDRISRLKRELYTRK
                     RIKSLRSGVEPAHESAHIMI"
     gene            1507..>2288
                     /gene="fmt"
                     /locus_tag="VLM90_12295"
     CDS             1507..>2288
                     /gene="fmt"
                     /locus_tag="VLM90_12295"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HSQ13798.1"
                     /translation="MAAPWRIIFMGTPQIAAATLAQLLTGPDTIVGVVTQPDSSAGRG
                     QKSSASPVRKLAESHAIPVLAAEKIRTPEFFQSLRNWLPDIIVVVAYGRILPKSILEL
                     APHGCVNVHYSLLPKYRGAAPAAWTIINGEAEAGVSTMKLVEKMDAGAIYLQEAIRLS
                     GQETTGSLQAQLTPVGAQLLLETLRRLKAGTLSATEQDESLTTLAPILKKENGLIDWQ
                     RPAIEIERRIRGFDPWPGSFTHFAGKMLKVHRATIVSTERRG"
BASE COUNT          516 a          692 c          634 g          446 t
ORIGIN      
        1 gcttatgcgg ccatgtctgg cactgtccgc attgcagcgt gacgttaact ctgcacctaa
       61 ggcgtcggat gctggcttgc caccactgcg actctcgccg cgccatgagc gacgtttgtc
      121 cggaatgtaa aaacccaagc ctggccccgg tgggaaccgg tacggagcag gttgaagagg
      181 ccctccgcga actgtttccc gacgccagag tggccagaat ggaccgcgac accaccagca
      241 agcgcggctc ccaagaggca ttgatcaggc gctgggagcg cggtgacatc gatatcctgg
      301 tcggcaccca gatgatcacc aaaggccatg atgtcgccgg cgtgacacta gtcggcgctc
      361 tctcagcgga cctgtcgttg aatttacccg acttccgcgc cgccgagcgg acttttcaac
      421 tgctcagcca agttgccggg cgggccggac ggggcaacga cccgggccgc atggtgattc
      481 aaacttactc gcccgatcat tatgcgattc agcacctgcc gaaccatgat tataagggtt
      541 tcttcgccgt cgagagcgaa ttccgccagg cgcttaacta tccgcccttc gccaaattaa
      601 ttaatttacg cttcgacggt cccaaggctg aagaagttga gaggcgcgcg aaatccgtag
      661 ctgcacagtt acgccgactc caagtccgcg agccaaagtt taacgccggc atcgaagtgc
      721 tcggccccgc ggccgcgccc atcgaaaaac tgcgcaatcg ctttcgctgg cagctcctac
      781 tcaaagggaa aaatagcgcc agcctgttgg aatttgccaa ccacgcccgc aggttctctc
      841 ccgatggccg cggcgggcgc ctgcagattg atgtcgatcc ttacagtatg ttatgaattt
      901 cagtatgtta tggcgatttt gaaaattctc aaataccccg agccggcact taagagagta
      961 gcctcaccgg tgcgcgactt tggcgcgaaa accgtccagc tggtcaacga catgctcgaa
     1021 actatgtatg ccgcgccagg tgtcggcctc gccgcgccgc aggtcggcgt atctcagcgt
     1081 gtagtggttc tcgacaccga tcacgagaat cccggcaagc aggtttataa gctcatcaat
     1141 ccagtgataa cccacgcgga gggttcagtg atctgggaag agggttgtct cagtgtcgtc
     1201 gacttcaccg ccgaggtgaa gcgcgcggcg caagtgcaag tcagcgcttt caatgagcag
     1261 caaaaagcga tcaagatcga agctgaaggt ttgctggcag tggccttgca acatgagatc
     1321 gatcacctcg atggcaagct attcatcgac cggatcagcc ggttaaagcg tgagctctat
     1381 acccgcaagc gtatcaagag tctgcgcagc ggcgtcgagc cggcacacga atcagcgcac
     1441 atcatgatct aatcgcgtcc gtcacgtttc taaataacag cctcatcgtt tcgtcgagtg
     1501 tttttcatgg cagcaccctg gcgcatcatc tttatgggca cgccgcaaat cgccgcggcg
     1561 actttggcgc aactcctcac cggcccagat accatcgtcg gcgtggtcac ccagccggat
     1621 agtagcgccg ggcgcggcca gaaaagttcc gcctcgccgg tacgaaaatt ggccgaatcc
     1681 catgccatcc cggttcttgc ggcggaaaaa attcgcaccc cggaattttt tcaatcgctg
     1741 cgcaattggc tgcccgacat cattgtggtg gttgcctacg gccgtatctt gccgaaatcg
     1801 attctcgagc tggctcccca cggctgcgtc aacgtacatt actcactcct gccgaaatac
     1861 cgcggcgccg cgccggccgc ctggacgatt atcaacggcg aagcggaagc cggcgtcagc
     1921 accatgaagc tagtggaaaa aatggatgcc ggggcgatct atttgcaaga ggctatcagg
     1981 ctcagcggtc aggaaaccac cggatcgctg caagcccagc taacgcccgt cggcgcccag
     2041 ttattgctgg aaaccttgcg ccgactcaaa gcaggaaccc tcagcgcaac cgaacaagat
     2101 gagagcctga cgacccttgc gccaatctta aagaaagaaa acggcctcat cgactggcaa
     2161 cgcccggcga tagaaatcga gcgccggatt cgcggcttcg acccttggcc gggaagtttc
     2221 acacatttcg ccggcaagat gctgaaggtt catcgagcca caatagtcag caccgagcgg
     2281 cgcggcag
//
LOCUS       DATIRS010000972         3498 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1450518, whole genome shotgun sequence.
ACCESSION   DATIRS010000972 DATIRS010000000
VERSION     DATIRS010000972.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3498)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3498)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3498
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1450518"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(40..297)
                     /locus_tag="VLM90_12300"
     CDS             complement(40..297)
                     /locus_tag="VLM90_12300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13799.1"
                     /translation="MSLRKNCIPTRRVVTTGVAALALNAIGASACVAGPISLFGAEPR
                     SLRRPLILAAWRALVDQAGIGKIHVMPLLSLRMGAWIGVVG"
     gene            633..1433
                     /locus_tag="VLM90_12305"
     CDS             633..1433
                     /locus_tag="VLM90_12305"
                     /inference="COORDINATES: protein motif:HMM:NF004825.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSQ13800.1"
                     /translation="MDFTNQIVLITGASSGIGKQLAIDFAKRGAVVIGCGRSIARLKE
                     VLKQVRQTSPTSLMIGCDVGDPEQVHGMIERVLTDYGRVDILINNAGIGIRKPFHQTD
                     LTTIEEIMRVNYFGAVYCTHELLPSMIAQGNGQIVNISSVAGNIGTLNMAAYCASKFA
                     MNGWSESLYHELTPLGVKVSLVCPGPVHTGFSRNFHNSEPQSPPSLFVDSSDVSQAVF
                     KVIEHNRFELVMPRWLALICWLKRVSPGLFRYLAQRRFRRHVVVPGVK"
     gene            complement(1571..2566)
                     /locus_tag="VLM90_12310"
     CDS             complement(1571..2566)
                     /locus_tag="VLM90_12310"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13801.1"
                     /translation="MECWNKLLAALLMVLTTLTVCHAQSRGERIRVVYSAIGSSQSPL
                     WIAHEAGIFKKHGLDAELLYVAGGSRAAQVILAGEAPVAMFNGSSVISANLADADLVN
                     VATGMNVLPFLLMVGPGIKQIEEIKGKKIAITRFGSATDFALRFAAEKWPVKPEKDFT
                     VLQLNGQPEMMAALKSGAVQGAMLNAEFAILARREGYRDLVDVATLGLTFPGSGLNTS
                     RTFIRNRRDVALRVVRAYVDSIHYGITQKKFAVGVFAKYLKSQDTPFLEAVHEMYLGK
                     YIPKIPYPSVESMKRALDDVAERDPRAKTARAEQFIDATLMQELEKDGFIKQLWR"
     gene            complement(2574..3329)
                     /gene="pgl"
                     /locus_tag="VLM90_12315"
     CDS             complement(2574..3329)
                     /gene="pgl"
                     /locus_tag="VLM90_12315"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: protein motif:HMM:TIGR01198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017057 - 6-phosphogluconolactonase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HSQ13802.1"
                     /translation="MTDREIIICRDLDVLSRRAAGQFVALAQQAIAARGHFSVSLSGG
                     STPKALSSLIATDEFKQQLAWQQIHLFWGDERCVAPGHAESNYRMVKESLLSKIHIPS
                     GNVHRMAGELEPLAEAVAYERELKQFFLQAETNLPRFDLLLLGLGEDGHTASLFPGSS
                     ALHETKRLVAPIYVEKLAAHRLTLTLPSINHAAQISFLIAGKSKAAIVKEIFAPAPPD
                     YPAARIQPARGRLTWFITQDAAGDLGDSQTTLE"
BASE COUNT          767 a         1033 c          997 g          701 t
ORIGIN      
        1 ggccggcgcc gacgatgata acgtcaaaat cattctgcat cagcccacga ccccgatcca
       61 cgcgcccatg cgcaacgaca gtaacggcat gacatgaatt ttgccgatgc cggcttgatc
      121 aacaagcgcg cgccacgcag ccaggattaa cggccggcgc agcgagcgcg gctcggcgcc
      181 aaacagcgag atcggcccgg caacacaggc gctagcgccg atagcgttga gagccagcgc
      241 ggcgacgccg gtggtgacca cgcggcgggt gggaatgcaa ttttttcgca agctcatctt
      301 gactcgctgg gagcgacgag gtttcattct taagataaca ttcgcagtgg agtccggaaa
      361 gctcggctcg ataggaacag ggcaaaaatg cagttagtgc acacaggagc gtcggcaagg
      421 tctcgatgcc tgcatgtgct atgacgctgg ccaaggctat attgacgctg ctgcgaaagc
      481 gagaaaatgg ttcgacaagc tggtcctgag ccgtgtcgaa gggctgaacg gaacaattcg
      541 aagcattgca agtttgtttc ggttcgtcct gagagccgtc gaaggacgct aagagtttat
      601 tccagcaacc cgttaacgac tcttcattgc cgatggattt caccaaccaa atcgtcctga
      661 tcaccggcgc ctccagcggc atcggcaagc agctggccat cgatttcgcc aagcgcggcg
      721 ccgtggtcat cggctgcggc cggtccatcg ccaggttgaa agaagtgctc aagcaagtgc
      781 gccagaccag tcccacgtcg ttgatgatag gctgcgacgt cggcgatccg gagcaagtcc
      841 atggcatgat cgaaagagtg ctcaccgact acggccgggt cgatatcttg atcaacaatg
      901 ccggcatcgg catacgcaaa ccattccatc agaccgactt gactactatt gaagagatca
      961 tgcgcgttaa ctacttcggc gcagtctact gcacccatga actgctgccg tcgatgatcg
     1021 cccagggcaa cggccagatc gtcaacatct cctccgtcgc cggcaatatc ggcacgctca
     1081 atatggccgc ctactgtgcg tcgaagttcg ccatgaacgg ctggtcggag agtctctatc
     1141 acgagctcac cccgctcggc gtaaaagtgt cgctggtctg tccgggaccg gtgcacaccg
     1201 gtttcagccg caactttcac aacagcgagc cgcaatcgcc gccgtcgctg ttcgtcgaca
     1261 gcagcgacgt cagccaagcc gtcttcaagg tgatcgagca caatcgcttc gagcttgtca
     1321 tgccgcgttg gctggcgctg atatgttggt tgaagagagt gtcgcccggc ctgtttcgct
     1381 atttggcgca gcgccgcttt cgccgtcatg ttgtcgtccc cggagtaaaa tagtcggcaa
     1441 gcgaaagttg gcgaccatcg atcgggaaaa tcgttcttgg cggatcagga agtgattgaa
     1501 caagattaaa tagccgcgcg gctcgtcgat ctccggcgtt tggatccgat ctgcgctcaa
     1561 gcggcgccgg tcagcgccac agctgtttaa taaatccgtc tttctctaac tcctgcatca
     1621 aggtcgcgtc gataaactgc tcagcgcggg cggtcttcgc ccgcgggtcg cgctcggcga
     1681 cgtcgtcgag ggcgcgcttc atcgactcca ccgagggata gggaatcttg ggaatgtatt
     1741 ttcccaaata catttcatgc accgcttcga gaaacggcgt atcctggctt ttgagatatt
     1801 tggcgaaaac accgacggcg aacttcttct gggtaatacc gtaatgaatg ctatcgacat
     1861 aggcgcgcac cacgcgcagc gccacgtcgc gccggttgcg aataaatgtg cggctggtgt
     1921 tcaaacccga accgggaaag gttaatccca aagtcgcgac atcgaccaga tcgcgatagc
     1981 cctcgcgccg cgccaggatc gcgaactcgg cgttgagcat cgccccctgc accgcgccgc
     2041 tttttaacgc cgccatcatc tccggctgtc cgttcagttg cagcacggta aaatcttttt
     2101 ccggcttcac cggccacttt tcggcggcga agcgcagcgc gaaatcggtc gccgagccga
     2161 aacgggtgat ggcgatcttc ttgcctttga tttcttcgat ctgcttgatt ccgggaccga
     2221 ccatcaacag aaatggcaaa acattcatac cggtcgcgac attcaccaag tcggcgtcgg
     2281 cgagattggc gctgatcacc gaactgccgt tgaacatcgc caccggcgct tcaccggcaa
     2341 ggatcacctg agccgcgcgg gagccgccgg cgacatagag caactcggca tcgagcccat
     2401 gctttttaaa aatccccgcc tcatgagcga tccatagcgg actctgcgaa ctgccgatgg
     2461 cgctgtaaac gacgcgaatc cgctcgccgc gagactgtgc gtggcacaca gtcaacgtcg
     2521 tcaataccat caacagcgcg gctagcaatt tattccaaca ctccattatg ccatcactcc
     2581 agcgtggttt gagaatcgcc aagatctccg gcggcgtcct gggtgatgaa ccaggtaagc
     2641 cggccgcgcg cgggttggat tctcgcggcc ggataatcgg gcggtgccgg cgcaaaaatc
     2701 tcctttacaa ttgccgcttt actcttgccg gcgattaaga aactaatctg cgcggcgtgg
     2761 ttgatagacg gcaacgtcaa cgtcagccgg tgcgcagcga gtttctcgac gtagatcggc
     2821 gctactagac gcttggtttc gtgcaacgcc gagctgccgg gaaaaagcga cgccgtgtgg
     2881 ccgtcttcgc caagaccgag gagcagcaaa tcgaagcggg gcaagtttgt ttctgcctgc
     2941 aagaaaaatt gttttagctc cctctcatag gccaccgctt cggcaagcgg ttccagttca
     3001 cccgccatgc gatgaacgtt cccggaggga atgtgaatct tagacagcag cgattccttg
     3061 accatgcgat aattgctctc ggcatgaccc ggcgcgacgc agcgctcatc gccccagaaa
     3121 agatgaattt gctgccaggc caattgctgc ttgaattcat cggtcgctat caagctggaa
     3181 agcgccttag gcgtcgagcc gcccgaaagc gaaacggaaa aatgtccgcg cgcggcgatc
     3241 gcttgctgcg ccagcgcgac gaactgcccc gccgcccggc ggctgagcac gtcgagatcg
     3301 cgacaaatga tgatttcccg gtcagtcacg ggcgagaaaa gcggcataat aggcggcgcc
     3361 gcgcagcgct gcttgatcgt tcaaaaccac ttgtacggga atggcggcga gcagatcgct
     3421 gtaacggcct ttaccggcaa aggcgcgcat gaaggcgccg tctttgagct tggcgagaat
     3481 tttcgacgcg atgccccc
//
LOCUS       DATIRS010000973         1873 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_467683, whole genome shotgun sequence.
ACCESSION   DATIRS010000973 DATIRS010000000
VERSION     DATIRS010000973.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1873)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1873)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1873
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_467683"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..523)
                     /locus_tag="VLM90_12320"
     CDS             complement(<1..523)
                     /locus_tag="VLM90_12320"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSQ13803.1"
                     /translation="MAATKSTITNLISKIWKMLRVTEIFHSIQGESTHAGRPCTFVRL
                     TGCPMRCKWCDSEYTFTGGDHFTIEQIMQKVRDFGCRLVEVTGGEPLAQREAFELIRQ
                     LCDEEYEVLIETGGYVSTTDVDERAKVILDIKCPASGEADRNDWSNLERLRADQDEVK
                     FVIADASDWEFAKK"
     gene            595..1596
                     /locus_tag="VLM90_12325"
     CDS             595..1596
                     /locus_tag="VLM90_12325"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HSQ13804.1"
                     /translation="MARAAEEHAILSNSQTRIDEVIGAGAQRLVERADNPRRLDASAL
                     IPRVRATVEKYVLKHEPEASAEQIGSFIDGLHADDLCLVIACQRGDQSAWSELVEGYG
                     VTVRSAARGASPNAEMAEDLAQSIWAELHGLKVRDDGQPAGKLAYYSGAGSLGGWLRA
                     VVGQLAIDRHRREARLVHTEEDADLDRLSLESEKESPDGRAFHSMTTPEDELATNLAS
                     AAVEKAFARALGELEDEDRLLVKLYYFDGLRLREAGAVLGVHEATASRRLTRIHGDVR
                     KRVETLLMKEHGWTQTEAARSLSQIAATLQMDVEPLLAAPAATMVESSETGGDSVAV"
     gene            1676..>1873
                     /locus_tag="VLM90_12330"
     CDS             1676..>1873
                     /locus_tag="VLM90_12330"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HSQ13805.1"
                     /translation="MLNDKDMDVLIGRYAKGAAKGTPVEHPDADELNAFAEGALPPSA
                     RQRYLSHFADCDDCRKLVSQLA"
BASE COUNT          393 a          519 c          577 g          384 t
ORIGIN      
        1 tcttctttgc gaactcccaa tccgacgcgt cggcgatgac gaatttgact tcgtcttgat
       61 ccgcccgcaa gcgctcaagg tttgaccaat cgttccggtc agcttcacct gaagccgggc
      121 actttatatc gaggatgacc ttcgcgcgtt catcaacatc cgtagtcgaa acatagccgc
      181 cggtttcaat caagacctcg tattcctcat cgcaaagctg ccgaataagc tcgaacgcct
      241 cgcgctgcgc aagcggctca ccgccggtga cttccaccag gcggcaacca aagtcgcgca
      301 ccttttgcat gatctgttca atcgtgaaat ggtcgccgcc ggtgaatgtg tactcgctgt
      361 cgcaccactt gcaacgcatc gggcagccgg tcagccgcac gaaagtgcag gggcggccgg
      421 cgtgcgttga ctcgccctgg attgagtgga aaatctcggt aactcggagc attttccaga
      481 ttttagatat tagatttgtg attgtcgatt tcgtggcggc caaccgcagc cgcctggctt
      541 catcaaactc gcgggcaaac gaatcggccg gacgcgtcta aggatcgtga tagcatggcg
      601 cgagctgccg aagaacacgc gattttgagt aacagccaga cccgaattga tgaagtaatt
      661 ggcgccggcg cgcagcgctt ggttgaacgt gcggacaacc cgcggcggct cgacgcgtcc
      721 gccttgatcc cgcgcgtgcg ggccaccgtc gagaaatacg ttctcaaaca cgagcccgaa
      781 gcctctgccg aacagatcgg ttcgttcatt gacggcttgc atgcggatga tctgtgtctg
      841 gtcattgctt gccagcgcgg ggaccaatcc gcttggagtg aactggtcga aggctacggt
      901 gtgacggtga gatccgccgc gcgcggggcg agtccgaacg cagaaatggc tgaggatttg
      961 gcccagtcta tctgggctga actgcacggc cttaaggttc gtgatgacgg gcaaccggca
     1021 ggcaagttgg cgtactactc aggcgccggc tcgctcggcg ggtggctgcg cgcggtcgtc
     1081 ggacagcttg caatcgatcg ccatcgacgc gaagcgcgcc tggttcacac ggaagaagat
     1141 gccgatctgg atcggctttc actcgagagt gagaaggaat ctccggatgg ccgggccttt
     1201 cattcgatga cgacgcccga agacgagctg gcgacgaacc ttgcgtccgc cgcggttgag
     1261 aaggcgttcg cgcgcgcttt gggtgaactg gaagatgagg atcgtttact tgtgaagctc
     1321 tactattttg atggtctgcg cttgcgtgaa gccggcgcag tgctgggcgt gcacgaagcc
     1381 accgcgagtc gcagactgac gcgaattcac ggcgatgtgc gcaaacgcgt cgagacgctt
     1441 ttgatgaaag aacatggctg gacgcagacg gaggcggcgc gctcgctctc gcaaatcgcg
     1501 gccacgctgc aaatggacgt cgagccgctg ctcgccgcac cagccgcaac catggttgaa
     1561 tcgtctgaga cgggaggcga ctcggtcgct gtttagtacc gagaccgcaa gatcgagcta
     1621 agtcgagcgt tcaacgatta gggaatatca gcgacggcgt cgcatagttt tgaaaatgct
     1681 gaacgataaa gacatggatg tgctgattgg acgctacgcg aagggcgcgg cgaagggcac
     1741 acctgtcgaa catcctgacg cggatgagtt gaatgccttt gcagagggtg cgcttccacc
     1801 atcagcccgg cagcgttatt tgtcgcattt cgccgactgc gatgactgtc gaaaactagt
     1861 gagtcaattg gcg
//
LOCUS       DATIRS010000974         1602 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1450937, whole genome shotgun sequence.
ACCESSION   DATIRS010000974 DATIRS010000000
VERSION     DATIRS010000974.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1450937"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1602
                     /locus_tag="VLM90_12335"
     CDS             <1..>1602
                     /locus_tag="VLM90_12335"
                     /inference="COORDINATES: protein motif:HMM:NF025038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSQ13806.1"
                     /translation="DLVKTLREELPKAFRQEAFDKEKSSLMEKFNNRAQELNVRFATL
                     ARERGFQVQTSSRGHIFFIPVVDGKPMQKPQDFAALSEDERREVERRQQELNVELERL
                     ARHQQEIMREMEQDIRTVERRFCEHLLIPILGRIIDKLDNPEVNTYLDETREHILNNL
                     DDFKESGPSQMALPFMPAPRERDPYLEYEVNVVVDNAKTQGAPLIVESAPTYLNLFGT
                     IERVVDRFGRVVTNFTRIKSGSFLRAHGGYLIFSLEDAITEPAVWKVLKRTLRSGRIE
                     METYEPFAMFSASGLKPEPVKVNTKVIVVGSAYLYHLLYTWDDDFHEMFKIRADFNPV
                     MQRDGDHQLAYAHWVGNLCNEEGMPHFDEGGVEKLIEYGARQAGDRDKVLASHATIAD
                     LVREAAFWARKEDRQLVSARHVEKALESRVFRSNRIEENIRELIANGTILVDIDGKKT
                     GQVNGLSVMEIGGYAFGRPSRVTASVGMGQAGIVNIERESKLSGNIHDKGMLILAGYL
                     RNRFGQNQPLALSASLCFEQSYGGV"
BASE COUNT          363 a          470 c          463 g          306 t
ORIGIN      
        1 atgatctggt caagaccttg cgcgaggaat tgcccaaggc atttcgccag gaagccttcg
       61 ataaggaaaa atcttcgttg atggagaagt tcaacaaccg cgcccaggaa ctcaacgtcc
      121 gattcgccac cctggcgcgc gagcgcggtt tccaagtgca gaccagttcg cgcggccata
      181 tttttttcat tccggtggtc gacggtaagc cgatgcagaa gccgcaggac ttcgcggcgc
      241 tttcggaaga tgagcggcgc gaagtggagc ggcgccagca ggagctcaac gtcgagctcg
      301 aacgcttggc gcgccaccag caggaaatca tgcgcgagat ggaacaggat atccgcaccg
      361 tggagcggcg tttctgtgaa cacttgctga tcccaatcct cggccggatc atcgacaagc
      421 tcgacaaccc ggaggtgaat acctatctgg acgagactcg cgaacatatt ctgaataatc
      481 tcgacgattt caaagaaagc ggcccaagcc agatggcgtt gccgttcatg ccggcgccgc
      541 gcgaacgcga tccttacctg gaatatgaag tgaacgtcgt cgtcgacaac gccaagactc
      601 aaggcgcgcc gctcatcgtc gaaagcgcgc caacctattt gaacttgttc ggcaccatcg
      661 agcgagtggt cgaccgcttt ggccgggtgg tgaccaattt tacccggatt aaatccggct
      721 cctttctacg cgcccatggc ggctatctga tcttcagcct ggaagacgcg attaccgaac
      781 cggcggtgtg gaaagtgctc aagcggacgc tgcgcagcgg ccgcattgaa atggaaacct
      841 acgaaccctt tgcgatgttc tccgcgtcgg gtttgaaacc cgaaccggtc aaggtcaaca
      901 ccaaggtcat tgtcgtcggc agcgcctatc tctatcacct tctctacacc tgggacgacg
      961 acttccacga gatgtttaag attcgcgccg atttcaatcc ggtgatgcag cgcgacggtg
     1021 accaccagct cgcctacgcc cattgggtcg gcaatctatg taatgaagaa ggcatgcccc
     1081 atttcgacga gggcggcgtg gaaaaattaa ttgaatacgg cgcccgccaa gccggcgacc
     1141 gcgataaagt cttggcgtcc catgcgacca tcgccgattt agtccgcgaa gcggctttct
     1201 gggcgcgcaa ggaagatcgc cagctggtgt cggcgcgcca tgtcgagaag gcgctcgaaa
     1261 gccgggtctt ccgctccaac cgcatcgaag agaatattcg cgagctgatc gccaacggca
     1321 cgatcctggt cgacatcgac ggcaaaaaaa ccggacaggt gaacggtctg tcggtgatgg
     1381 agatcggcgg ctacgccttc ggccggccaa gccgggtgac cgccagcgtc ggcatgggcc
     1441 aggccggtat cgtcaatatc gagcgcgagt cgaagttaag cggcaacatc cacgacaaag
     1501 gcatgttgat cctagccggc tatctgcgca accgcttcgg ccagaaccaa cccctggcgc
     1561 tctcggcaag tctctgtttc gagcaatcct atggcggcgt cg
//
LOCUS       DATIRS010000975         4104 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1352464, whole genome shotgun sequence.
ACCESSION   DATIRS010000975 DATIRS010000000
VERSION     DATIRS010000975.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4104)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4104)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4104
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1352464"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..247
                     /locus_tag="VLM90_12340"
     CDS             <1..247
                     /locus_tag="VLM90_12340"
                     /inference="COORDINATES: protein motif:HMM:NF015953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HSQ13807.1"
                     /translation="PALIAPLVIGLVNATVGFILKIVTFPITILSLGIFLLVINALML
                     MFAAYLVPGFAVASFWSAFFGAIVMSFVGMILRSLLT"
     gene            complement(379..1257)
                     /locus_tag="VLM90_12345"
     CDS             complement(379..1257)
                     /locus_tag="VLM90_12345"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13808.1"
                     /translation="MDVLSITGYNRRPPQLVAEYKGFFAKEKLEVRFHETTYAPDHNQ
                     GMAEGKWDFTLSSADTMIARTTTDGVDYMLFMQAEEGLSAYLIGQPGYDSLDKLRGKL
                     LAGDPGDSNLDLIRKKILRKHGIDDTEYDIEIIGSSPVRLEAFLQRRVVAAMLTPPAS
                     DKALAAGGLLLASGDDYVPGWPLTCGWTLRPWLLEHRALVVRFIRAWAAATDWLLQPE
                     HREETLQLSMDHEKLNRAAAEIAYSKIVPRARINPAAIQTVIELRKEMGVYKPPFDPP
                     ARFYDESYWREATGTR"
     gene            1382..2083
                     /locus_tag="VLM90_12350"
     CDS             1382..2083
                     /locus_tag="VLM90_12350"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSQ13809.1"
                     /translation="MKLKDKVALITGGGRGIGKAIAMHYGREGAKLALCARTGAELDQ
                     TVKELRAMNVDAEGWSCDVSLEEPVKDFVTKAHKKFGRIDVLVNNAGVMTRPAPMIEL
                     DVKKWDYTIAVNLRGPFLITQAVLPIMMQQKSGSIINVSSMIGRGAYANFLAYATSKW
                     GLEGFSQTLAAEVRASNIRVNSVEPGYVATKLTGFNGSKPESVTDVFVFLASDEAKHV
                     TAKMLSSSGWKSQVK"
     gene            complement(2135..2314)
                     /locus_tag="VLM90_12355"
                     /pseudo
     CDS             complement(2135..2314)
                     /locus_tag="VLM90_12355"
                     /inference="COORDINATES: protein motif:HMM:NF012675.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
     gene            2494..>4104
                     /locus_tag="VLM90_12360"
     CDS             2494..>4104
                     /locus_tag="VLM90_12360"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HSQ13810.1"
                     /translation="MRLLRQSWSRRRAVNIAIAAVFLALVSLATRPWLLSGQEPTAAD
                     ELAAHAKFLAAPERSGRGVGTPGIAAARDYIAAEFAKYGLLPGGDNNSYLQSFAVAVG
                     VQVKEPSILILGREPVRLHEDWLPLGLSSSGKIEGEAVFAGYGITAQDYGYDDYAGID
                     VKGKIVVVLRYEPPPKNSQSPFRKSPDFSSHAALRTKANNAREHGAVGMILIDMDNLA
                     DAKTELMSLRSSLWRSGNSLVAAQIKRQVVEKWFAAQGVSVKDLKEKIDREERPASLA
                     MPGTKLSVQVSLEEERQRAENVVAILPGKDPKVHNEYIVIGAHYDHLGLGHYGARDQS
                     ASGMIHHGADDNASGTAVLLQLARRLRQFEPKPARAIVFVAVSAEELGLHGSRHFVAK
                     WPQIGAIKSMINLDMVGRLREDRVTVFGTRSAPPFDAIVGAGAKRLGLQTNQPDGVGP
                     SDHLSFYNKQIPVLHFFTGSHTDYHRPGDTWDKLNYTGMAQIGDFVLGSALAIAALPE
                     SPAFASLPGRPTSSETGKPRVGSVYLGII"
BASE COUNT          868 a         1238 c         1126 g          872 t
ORIGIN      
        1 cccagcgttg atcgcgccgc tagtcatcgg cctggtgaac gccaccgttg gatttatcct
       61 gaaaatcgta accttcccga taacgatcct gtcactggga atattcttac tggtcatcaa
      121 tgctctgatg ctcatgttcg ccgcctacct agtccccggc tttgccgtcg ccagtttctg
      181 gtcggcgttt ttcggcgcca tcgtcatgag cttcgtcggc atgatcctgc gctcattgtt
      241 gacctagtgg aaataacagc gcatcgacaa attccctctc accacgacgg agatcacgaa
      301 ggacacgacg gtttcggata gttattattc cgaacttcgg cgtcctggtg aataccggct
      361 tcccttcctt ggttgcagct accgcgttcc cgtcgcttcg cgccagtaac tttcgtcgta
      421 aaaccgcgcc ggcggatcga acggcggctt gtagacgccc atttctttgc gcagctcgat
      481 aacagtttgg atcgccgccg gattgatccg cgccctggga acgattttgg aataggcaat
      541 ttcggctgct gcccgattga gcttttcgtg gtccatcgac aactgcaagg tttcttcgcg
      601 atgttcgggt tgcaacaacc aatccgtcgc cgccgcccag gcgcgaatga agcgcacgac
      661 tagcgcgcga tgctccaaca accacggccg cagcgtccag ccgcaggtaa gcggccatcc
      721 tggaacatag tcgtcaccgc tggcgagaag aagcccaccg gcggccaacg ctttatcgga
      781 agccggcggc gtcagcatag ccgcaaccac ccggcgttga agaaacgcct ccaagcgcac
      841 cggcgagctg ccgatgattt cgatatcgta ctcggtgtcg tcgatgccat gcttgcggag
      901 aattttttta cggatcagat cgagattcga gtcgcccgga tcgccggcga gcagcttgcc
      961 gcgcagttta tcgagagaat cgtagcctgg ctggccgatg agataggcgc tcagtccttc
     1021 ttcggcttgc atgaacagca tgtagtcgac accgtcggtg gtcgtgcgcg cgatcatcgt
     1081 gtcggcgctg ctgagggtaa aatcccactt cccttccgcc atgccttggt tgtggtccgg
     1141 cgcgtaggtg gtctcgtgga agcgcacttc gagcttctcc ttggcaaaaa atcctttgta
     1201 ctccgccacc aattgcggag gcctgcggtt gtaaccggtg atactgagaa cgtccatggt
     1261 tcgcacctcc ctacgcggct ctcttcctat cgcctcccgg ccaattgctc aagcgtaaaa
     1321 tggttggctt ccatattttt tcaatgtaga ttctgatttt ccattgctcc gaggctccgc
     1381 aatgaaactc aaagacaaag tcgcgctgat caccggcggc ggccgcggca tcggcaaagc
     1441 catcgccatg cactacggcc gcgagggcgc caaactcgcg ctgtgcgcgc gcaccggcgc
     1501 cgagctcgat caaaccgtca aagaattacg cgccatgaat gtcgacgccg aaggctggag
     1561 ctgcgatgtc tcgctggaag agccggtcaa agatttcgtc accaaggcgc acaagaagtt
     1621 cggccgcatc gacgtactgg tcaataacgc cggggtcatg acccggccgg cgccgatgat
     1681 cgagctcgac gtaaaaaaat gggactacac catcgcggtc aatctgcgcg gcccgtttct
     1741 gatcacccaa gcggtgctgc caatcatgat gcaacaaaaa agcggctcga tcatcaacgt
     1801 ttcgtcgatg atcggccgcg gcgcctatgc caactttctc gcctacgcca cctcgaaatg
     1861 gggattggaa ggcttctcgc agaccctggc tgccgaagtg cgcgcgtcga acattcgggt
     1921 caattccgtg gagcctggtt acgtggcgac caaactcacc ggtttcaacg gcagcaagcc
     1981 ggaatcggta accgacgtat tcgtcttttt ggcttcagac gaagcgaaac atgtcacggc
     2041 caaaatgctc agctcttccg gctggaagtc gcaggtcaaa tgaattctcg gaatcctccg
     2101 ctggtgcact aacaattcac cagcattttg gcaattacaa gccgagcagc tccatgatct
     2161 tcaattgatc aaagccgacc accgactggc cgtcgataat cgtcaccggc gtgctttgaa
     2221 aaccttgatc gatcagttcc ttcatcgctg ccttgtcggc gcggacattt ttctcgacaa
     2281 attgaacgcc cttttgagat agaaactcta cctctttgtg acaggggcct cagccaggct
     2341 gggtataaac aattacggaa gtcgccatct tcaatctcct ctacacgata gataaatact
     2401 tttataacac ttcagatttg ccgccgcaaa agtcttaatt cgagaccaga ctggcgacaa
     2461 gcgcgccgca aacatgttag cttgaattgg cttatgcgtc tccttcgcca gtcctggtcc
     2521 cgccgccgcg cggtcaacat cgccatcgcc gcagtttttt tagcgcttgt cagcctcgcc
     2581 acccggccct ggctgctgtc agggcaggaa ccaacggcgg cggacgagtt ggcggcacat
     2641 gccaagtttt tggcggcacc ggaacgtagc ggccgcggcg ttggcacacc gggcatcgcg
     2701 gcagcgcggg attacatcgc ggcggaattt gccaaatacg gtctgcttcc cggtggtgac
     2761 aacaacagtt atctgcaaag cttcgcggtc gcggttggcg tgcaggtgaa agagcctagc
     2821 atcttgattc ttggccgaga gccagtacgg ttgcacgagg attggctgcc cctgggcctt
     2881 tcgtcatcag gtaagatcga aggcgaagcg gtcttcgccg gctacggcat taccgcacaa
     2941 gactacggct acgatgatta cgccggcatc gatgtaaagg gcaagatcgt cgtcgtgctg
     3001 cgctacgagc cgccgccaaa aaatagccaa agcccattta gaaaatctcc cgacttttcg
     3061 tcccacgccg cgctccgcac caaggccaac aacgcccgcg aacatggcgc cgtcggcatg
     3121 atcctcattg atatggacaa ccttgccgac gcgaaaacag aattaatgtc gctgcgtagc
     3181 agcctgtggc gcagcggcaa cagcttggtg gcggcacaaa tcaaacggca agtcgttgag
     3241 aagtggttcg cggctcaggg agtatcggtc aaagatctca aagaaaaaat cgaccgtgaa
     3301 gagcggccgg cttcgctggc catgccggga actaaactct cggtgcaggt aagcctcgaa
     3361 gaagagcgcc agcgcgccga aaatgtcgtc gcgatactac ccggcaaaga cccgaaagtt
     3421 cacaacgaat atatcgtcat cggcgcccat tacgatcact tgggcctcgg ccactatggc
     3481 gcgcgcgatc agagtgcttc cggcatgatc catcatggcg ccgacgataa cgcttccggc
     3541 acggcggtgc tgctccagtt ggcgcgccgg ctacgccagt tcgagcccaa gccggcgcgc
     3601 gccatcgtct tcgtagctgt ttctgccgag gaattggggc tgcacggctc gcgccacttt
     3661 gttgccaagt ggccgcagat tggtgcaatc aaatccatga tcaacttgga catggtcggc
     3721 cggctgcgcg aagaccgcgt caccgtattc ggcacgcgct cggcgccgcc atttgacgcc
     3781 atcgtcggcg ccggggccaa gcggctggga ttacaaacca accagcctga cggcgtcggc
     3841 cccagcgatc acctgtcgtt ttacaacaag cagattcccg tgctgcattt ctttaccggc
     3901 agccataccg attatcaccg ccctggcgac acgtgggata aactcaacta cacgggcatg
     3961 gcgcagattg gcgacttcgt gctcggctcg gcgctggcca tcgcggcatt gccggaatct
     4021 cccgccttcg ccagcctacc ggggcgaccg acatcttccg agacgggcaa gccgcgggtt
     4081 ggcagcgttt atctgggaat catt
//
LOCUS       DATIRS010000976         2334 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1746583, whole genome shotgun sequence.
ACCESSION   DATIRS010000976 DATIRS010000000
VERSION     DATIRS010000976.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2334
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1746583"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1055
                     /gene="trpB"
                     /locus_tag="VLM90_12365"
     CDS             <1..1055
                     /gene="trpB"
                     /locus_tag="VLM90_12365"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR00263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HSQ13811.1"
                     /translation="AYYIKEYVGRETPLYFAERLTRSLGGATVYLKREDLCHTGAHKI
                     NNTMGQILLARHMGKRRIIAETGAGQHGVATATAAARFGMECEIFMGKEDVQRQSLNV
                     FRMKLLGAKVRVVESGSQTLKDAMNEALRDWVTNVRTTYYLIGSVAGPHPSPMMVRDF
                     QSVIGREARRQILQKEGRLPDYLVACVGGGSNSMGLFFPFIKDRQVKMIGVEAAGHGL
                     SSGKHSATLQRGEVGVLHGSKSYLLQDDKGQIKETHSVAAGLDYPGVGPELSYLRDCG
                     RVQFDSATDDEAIASIRLLAEVEGIIPALESAHAIAVVRRLAPKLKKRQIVIVNLSGR
                     GDKDMTTVGDYLGVKL"
     gene            1148..1960
                     /gene="trpA"
                     /locus_tag="VLM90_12370"
     CDS             1148..1960
                     /gene="trpA"
                     /locus_tag="VLM90_12370"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: protein motif:HMM:NF012511.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HSQ13812.1"
                     /translation="MSRIENKFIAMKQRGEAALIPFITAGDPDLATTLKIMRALEAAG
                     ADVIELGIPFSDPSADGPTIQRSSERALKNPISLPAIFRLVRDFRRTSELPIILFGYY
                     NPFFRFGLDKFATQAAQSGADGVLCVDLPPEESGELKSCTDRRDLDVIFLLSPTSGED
                     RRRLVARHGRGFIYYVSVTGVTGARQAFDSDLRRQVAQVRKATALPVGVGFGISTPRQ
                     AAWIAEFADAAVVGSALVQRIEQGKSKADKVQQAGAFIAQLKRAIKLARKKN"
     gene            2018..>2334
                     /locus_tag="VLM90_12375"
     CDS             2018..>2334
                     /locus_tag="VLM90_12375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13813.1"
                     /translation="MASYAETIERIYNLHGGAIDLRLDRVAGALKLFDHPERKFLSLH
                     IAGTNGKGSTSAILQRILSLAGNRTALYTSPHLVSFTERIKINDQEIAEAEVIAIADE
                     IWRR"
BASE COUNT          498 a          678 c          687 g          471 t
ORIGIN      
        1 ttgcctatta tatcaaagag tatgtcggcc gggaaacgcc gctctatttc gccgaacgac
       61 tgacgcgaag cttaggcggc gcgactgtct atctcaaacg cgaggatctc tgtcacaccg
      121 gcgcgcataa aatcaacaac accatgggcc agatcctctt ggcgcggcat atgggcaagc
      181 gccgcatcat cgccgagacc ggcgccggac agcatggtgt ggcgaccgcc acggcggcgg
      241 cgcgcttcgg tatggagtgc gagatcttta tgggcaagga agatgtccag cgccagtcgc
      301 tcaacgtctt tcgcatgaag ctcctgggcg ccaaagtgcg ggtcgtcgaa tccggcagcc
      361 agacgctcaa ggatgccatg aacgaagcgc tgcgcgactg ggtgaccaac gtgcgcacga
      421 cctattactt aattggctcg gtggccgggc cgcatccctc tccgatgatg gtgcgggatt
      481 ttcaatcggt catcggccgc gaggcgcgcc ggcagattct acaaaaagaa gggcggctgc
      541 cggactatct ggtcgcctgt gtcggcggcg gcagcaactc gatggggctg tttttcccct
      601 ttatcaaaga ccggcaggtc aagatgatcg gcgtcgaggc cgcgggtcac gggctcagtt
      661 ccggcaaaca ctcggcgacc ctccagcgcg gcgaagtggg agtattgcat ggcagcaaga
      721 gttatctctt gcaagacgac aaaggccaaa tcaaggaaac ccactcggta gcggcgggtt
      781 tggattatcc gggcgtcggt cctgaactca gctacctgcg cgactgtggc cgggtacagt
      841 tcgattcggc gaccgacgac gaggcgatcg cctcgatccg tttactcgcc gaagtcgaag
      901 ggatcattcc cgccctggaa agcgcccatg cgatcgcggt ggtgcgccgt ttggcgccga
      961 aactcaagaa gcgccaaatc gtcatcgtca atctatccgg ccgcggcgat aaagatatga
     1021 ccaccgtcgg cgactatctt ggagtgaaat tataagaatc gttaaacggt tcaagcgttc
     1081 agccgttcaa cgaccgatcc tatccgcggc aaccgtgaac cgttgaacga gtggtgcgaa
     1141 ttgatttatg agccgtattg aaaataagtt tattgcgatg aagcaacgcg gtgaagcggc
     1201 gctgattcca tttatcaccg ccggtgaccc tgacttggcg accacgctca agatcatgcg
     1261 tgccttggaa gcggctggcg cggatgtcat cgagttgggc atcccgtttt ccgatccgtc
     1321 ggcggatggc ccgacgattc agcgttcgtc ggagcgggct ttgaagaacc cgatctcctt
     1381 gccggcgata ttccgcttgg tacgcgactt tcgccgtact tccgaactgc caattattct
     1441 ctttggttac tacaatccgt ttttccgttt cggcctcgac aagtttgcca cgcaagcggc
     1501 acaatccggc gccgacggcg tactctgtgt cgacctgccg ccggaggaga gcggcgagct
     1561 taaaagctgc accgaccgcc gcgatctcga cgtcatcttt ctcttgtcgc ccactagcgg
     1621 tgaagaccgc cggcgcttgg tggcccgcca cgggcgtggc tttatctatt atgtttcggt
     1681 gaccggcgtt accggtgcgc ggcaagcttt cgatagcgat ctgcgccgcc aggttgctca
     1741 ggtgcgcaag gcgacggcat tgccggtggg cgtcggcttc ggcatttcga cgccgcggca
     1801 agcggcctgg atcgccgagt tcgctgatgc agccgtggtc ggcagcgccc tggtacaacg
     1861 catcgagcaa ggcaaaagca aagcggacaa ggtgcagcaa gccggggctt tcatcgccca
     1921 gctcaaacgg gcgataaaac tagcccgcaa gaaaaattga cccagactga acgaaggcgc
     1981 ggaatctgcc gaggattacc gaggaccgct aagctcaatg gctagctatg ctgaaactat
     2041 tgaacggatt tataatctgc acggcggggc catcgatctg cgcctcgata gagttgccgg
     2101 cgcgctaaaa ctatttgacc acccggaacg aaaattcctt tcgcttcaca tcgccggaac
     2161 caacggcaaa ggctctacct cggcgatact ccagcggatt ctatcactcg ctggcaaccg
     2221 taccgcttta tatacttcgc cccacctggt gtcgtttacc gagcgcatca agatcaacga
     2281 ccaggaaatc gccgaagctg aagtcatagc catcgccgac gagatctggc ggcg
//
LOCUS       DATIRS010000977         3373 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1844474, whole genome shotgun sequence.
ACCESSION   DATIRS010000977 DATIRS010000000
VERSION     DATIRS010000977.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3373)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3373)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3373
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1844474"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            134..955
                     /gene="mutM"
                     /locus_tag="VLM90_12380"
     CDS             134..955
                     /gene="mutM"
                     /locus_tag="VLM90_12380"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: protein motif:HMM:NF002211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008534 - oxidized purine nucleobase
                     lesion DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HSQ13814.1"
                     /translation="MPELPEVETVCRSLRPHLLGRRIEAVDVRERRLRVPVDILRVER
                     LAGKRIESVDRVAKYILLRLTGASVWLFHLGMSGKLICAANDTPRQKHDHIVVDLDDG
                     AQLRYHDPRRFGLAIVSHADELGELSQLRRLGVDPFAETLTGEYLFSFTRASERRIRD
                     LLLDQQIVAGLGNIYANEVLAMVRVKPTTRAWRLTRKQVGMIAAAIPELLYDAIQWCG
                     TSFSDYRDADDKSGEFQNHLRVYDRQGEPCRICPGTIKRVAIGNRSAFYCPTCQK"
     gene            1201..2445
                     /locus_tag="VLM90_12385"
     CDS             1201..2445
                     /locus_tag="VLM90_12385"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ13815.1"
                     /translation="MSNSPTTSLKLLSPLRHRDFRLFWIGLLLSSVGSQFTTVAMAWQ
                     IYELTNSPLQIGLIGLARALPHVAMLLFGGLLADAMDRRRLMMATQASLFVVSGTLAY
                     LTMTGSVIPLTLYGVTVFLALFSSLEAPSRHAIVTNLVPAEDLPRAMAISSTQRQIAT
                     IAGPSIAGLILAFAGPALCYAIDAISWLVMFAVLLLIRAELPQRGGWRTVSFSALGVG
                     FRFVWGHAVIFPFLMMDLGVNVFGTVRALYPIYARDILAVGPQGLGVLYAASAAGALI
                     GALGLSLFGQIRQAGRWILFGVTVYGLCLLGFAYSRWFWLSAVLLLGSGIGDTISAIL
                     RSTINQLSTPDELRGRMSSINSIFTNSGPQLGQFQAGALAAVIGAEMAAGAGAVIILL
                     IVGILIAGFPHVRDYRINRGDG"
     gene            2623..>3373
                     /locus_tag="VLM90_12390"
     CDS             2623..>3373
                     /locus_tag="VLM90_12390"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HSQ13816.1"
                     /translation="MNTQPQISPVMRGLSAYVAAALRRPLPPPVNEKTKHHILDTIAA
                     MISGSRLAPGMKAISYVKNLGGAKEASVIGSGVVTTAVNAALANGMLAHADETDDSHA
                     PSLTHPGCGIVPAALAMAEREQRHGAALLRAVALGYDVGCRLTQSLNAHQFREDGHST
                     HSFGPMFGAAAAAGALAGLRERQVRHLLSFMAQQASGISCWMRDGDHIEKSFDFGGMP
                     ARNGVAAATMVAHGFTGVDDVFAGEGNFFVAY"
BASE COUNT          599 a         1009 c         1003 g          762 t
ORIGIN      
        1 atagtagtac gaaggacacg aagggttcgg ataatcaaag ccccgaactt ggtgcacttc
       61 gtgttcttcg tggtgaaatt tctttcaccg taaactcaga ggcatcataa ccaaatccta
      121 gctactcact gccatgcccg aactccccga agtcgaaacc gtctgccgca gtttgcggcc
      181 ccatctgctc ggccgcagga tcgaggcagt cgacgtgcgc gagcgccggc tgcgtgtgcc
      241 ggtggatatt ctacgagtcg agcgcttggc cggtaaacgg atcgagtcgg ttgaccgagt
      301 agccaaatat attttgctgc gtctgaccgg cgcatccgtg tggctgtttc atctggggat
      361 gtcgggtaaa ctgatctgcg cggccaatga caccccacgc cagaagcacg atcatatcgt
      421 cgtcgattta gatgacggcg cgcagctgcg ttaccatgac ccgcgccgat tcggacttgc
      481 catcgtcagt cacgcggatg agctgggcga attgtcccag ttgcgccgtc tcggtgtgga
      541 tcccttcgct gagacgctca ccggcgagta tctgttcagt ttcacgcgcg cctccgagcg
      601 gcgcattcgc gatctcttgc ttgatcagca gatcgtcgcc gggctcggca atatttacgc
      661 taacgaagtg ctggcgatgg tgcgggtcaa gccgacgacg cgcgcctggc ggctgacgcg
      721 caagcaggtg gggatgatcg ccgcggcgat tccggagcta ctctatgacg cgattcaatg
      781 gtgcggcacg tcgttctcgg actatcgcga cgccgacgat aagtccggag aattccagaa
      841 tcatctgcgt gtctacgatc gccagggtga accctgccgg atttgccccg gcacgatcaa
      901 acgagtcgcc atcggcaacc gcagtgcttt ttattgtccg acatgtcaga aatgaaagat
      961 ctgttcctat caacgcttgg ggtgggcaaa atcccctgcg atccgttgcc aagaaaattc
     1021 gtcataccgg cccttcgacg gcgctcaggg taaactccag ccggtatcca gacgcatcat
     1081 caacctggat accgttttgc aacggtatga cggtcgctgg ccgccacctg ggttccggct
     1141 ttcgtcgcag taaaggagcg tttaaagcgt tctgtaaatt tcgtgttcgc acaatattgc
     1201 atgagtaact ccccgacaac ttcactcaaa ctcctatcgc cactgcgcca tcgcgatttc
     1261 cgattatttt ggatcggctt gttgctctcc agcgttggca gtcagtttac caccgtggcg
     1321 atggcttggc agatctacga actcaccaac tcgccgttgc agatcggctt gatcggtctg
     1381 gcgcgggcgc tgccgcatgt ggcgatgctg ctgttcggcg gcttgctcgc cgacgccatg
     1441 gaccggcgca gattgatgat ggcgacgcaa gctagtttgt ttgtggtttc cggaactctt
     1501 gcgtatctca ccatgacggg gagcgttatc ccgctgacgc tctacggggt tacggtgttt
     1561 ctcgccttat ttagctcact cgaagcgccg tcgcgccacg ccatcgtgac taatcttgtg
     1621 cccgccgaag atttgccgcg cgccatggca atctccagca cccaacgcca gatcgccacc
     1681 atcgccggtc catcgatcgc cggtctgatc ctggctttcg ccggccccgc gctctgttac
     1741 gccatcgatg cgatctcctg gctcgtcatg ttcgcggttc tgctattgat ccgtgccgaa
     1801 ctgcctcagc gcggcggctg gcgcacggtt tcgttcagcg ctctcggcgt cggtttccgt
     1861 ttcgtctggg gtcacgcggt gatttttccg ttcttgatga tggatctggg cgttaatgtt
     1921 tttggcacgg tgcgcgcgct ctatccgatt tacgcccgcg atattctcgc cgtcggacca
     1981 caaggtttgg gtgtgctcta cgccgccagc gctgccgggg cgctgatcgg cgctctcggt
     2041 ctcagcctgt tcggccagat tcgccaggcc ggccgctgga ttctcttcgg cgtgacggtt
     2101 tacggactgt gtctcctggg ctttgcgtat tcccgctggt tctggttgtc ggcggtgctc
     2161 ttgctaggct ccggcatcgg tgacaccatc agtgcgatcc tacgctcgac catcaaccag
     2221 ctgagcacac cggacgaatt gcgcggccgc atgtcgtcga tcaacagcat cttcaccaac
     2281 agcggcccgc aactcggcca attccaagcc ggcgcgctag ccgccgtcat cggcgccgaa
     2341 atggccgctg gcgccggcgc ggttattatt ctattgattg ttgggattct gattgccggt
     2401 tttccgcatg tgcgcgatta tcgaatcaat cgtggcgatg gttagcaggg cgaatggcgt
     2461 aggacgaagg ggttcgtcgg gagattgagc ggtagagtat gaaagccaag acatcaaagt
     2521 ctcgggttag cgcttcgcgg cgcgccggca gaagaaggcg gcgcgcgcac gccataaact
     2581 aatgggcggc ccctttcccc cgtgcttttg tacgattgcg tcatgaacac gcaaccacaa
     2641 atctcaccgg tcatgcgtgg gctgagcgct tacgtcgcag ctgcgctgcg gcggccgttg
     2701 ccgccaccgg ttaacgaaaa aacaaaacat cacatcctcg ataccatcgc cgcgatgatt
     2761 tccggttcgc ggctcgcgcc ggggatgaaa gcgatctcgt atgtaaagaa tctcggcggc
     2821 gccaaagaag ctagcgtcat tggaagcggc gttgtgacca cggcagtaaa cgccgcactg
     2881 gccaacggca tgctcgccca cgccgacgag actgacgact cccacgcgcc ttcgctgact
     2941 catccgggat gtggcattgt gccggcggcg ctggccatgg ccgagcggga gcagcgtcat
     3001 ggcgcggcgc tgctccgcgc cgtcgcgctc ggctatgacg tgggctgccg gttgacgcag
     3061 tctctgaacg cccaccagtt ccgcgaggac ggccattcaa cgcatagttt tgggccgatg
     3121 ttcggtgccg ccgcggcggc cggcgcgctg gcgggattac gcgagcgtca agttcgccat
     3181 ctgctttcat tcatggcgca gcaggcgtcg ggcatatcgt gttggatgcg cgacggcgac
     3241 catatcgaaa agtctttcga cttcggcggc atgccggcgc gcaatggcgt cgccgcggcg
     3301 acgatggtcg ctcatggctt taccggcgtc gatgatgtat tcgccggcga gggcaatttt
     3361 tttgtcgcct acg
//
LOCUS       DATIRS010000978         2448 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1058426, whole genome shotgun sequence.
ACCESSION   DATIRS010000978 DATIRS010000000
VERSION     DATIRS010000978.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2448)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2448)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2448
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1058426"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            69..779
                     /locus_tag="VLM90_12395"
     CDS             69..779
                     /locus_tag="VLM90_12395"
                     /inference="COORDINATES: protein motif:HMM:NF025871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing redox enzyme family protein"
                     /protein_id="HSQ13817.1"
                     /translation="MTENQWKECLGEFVRDYIRSPELERYFAVRMTKPRAAIMVQQQS
                     HFVRHRRDCWANVSANCPVMAVKQRILEHEYEEIIKDDFSEYGHLHLIIRQGQSVGLS
                     ADDVLNSKRLPTTMAALYAWGWMTRVKPWTESLAAMTITEWSNDDRLLGDLGGGQSTR
                     MAKKWMDEMGFTWKEIPNLQAHSQADEKHSDMFLPFLAEHATGDKEAAAIQAAKESLD
                     LNAIFRAGIARAQEKLAG"
     gene            955..1653
                     /locus_tag="VLM90_12400"
     CDS             955..1653
                     /locus_tag="VLM90_12400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13818.1"
                     /translation="MSHWPKTRETLNEMVNRHFDTPEYHQLFAVKLTPARQKIWDLHY
                     PHYIKSRRDCWGAAAVHAPLDVKRAIWEHEKDELIFDKRMGSAHLTDEQMAAAAAESN
                     LLPGVRAALMAWMYLSTTRPWIEALTVNHITERKNNPAIVKGGGFTARFAHKRVADQG
                     GTIEGLDINTKVHMVADEDHSDMFEPIYDRHITDERTAQAVIRSAQDSLAVDRAYRSA
                     LATAMAQIAESAAA"
     gene            1911..>2448
                     /locus_tag="VLM90_12405"
     CDS             1911..>2448
                     /locus_tag="VLM90_12405"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HSQ13819.1"
                     /translation="MAQHFSVLAKNGIVASSQPLATLAGVQVLMNGGNAVDAAIATAA
                     VLGVVEPSSIGIGGDAFGLFYSARDRSIKALDASGRSPYAMNLDFSRKSGFKEMPQRG
                     IHSVTVPGAVHGWATLLKSHGTKSLSDVLQAAIRHAEEGFPVAELTAEQWKESAARLK
                     ADEGGSINYVINGRAPRAG"
BASE COUNT          561 a          652 c          755 g          480 t
ORIGIN      
        1 agagacgacc gaagcggcgg tggctttttc aacaaagttc taatacatga cctcagcgag
       61 ttgaacccat gaccgaaaat cagtggaaag aatgcctggg cgaatttgtg cgcgattata
      121 tccgttcgcc ggaattggaa cgctactttg cggttcgcat gaccaagccg cgggccgcga
      181 tcatggtgca gcaacagagc catttcgtac gccaccggcg cgattgttgg gctaatgtct
      241 cggccaattg ccccgtgatg gcggtgaaac agcgaatcct cgaacatgaa tacgaggaga
      301 tcatcaagga cgatttttca gaatacggtc acttacatct gatcattcgg caaggccaat
      361 ccgtcggctt gagcgccgat gacgtcctga actcgaaacg gctgccgaca acgatggcgg
      421 cgctttatgc gtggggctgg atgacacggg tgaaaccgtg gacggagagc ttggcggcga
      481 tgacgatcac cgaatggtcc aacgacgacc ggctgctcgg cgacctgggc ggcggccagt
      541 cgacgcgtat ggcgaaaaaa tggatggacg agatgggctt tacctggaag gagattccca
      601 accttcaagc ccacagccag gcggacgaaa agcacagcga catgttcttg ccgtttctcg
      661 ccgagcacgc gaccggggac aaagaggcgg ctgccattca agccgcgaaa gaatcgctgg
      721 atcttaacgc aatctttcgc gcagggatcg caagggcgca ggagaagctt gcggggtaga
      781 agattggagt ggagtaaagg agagaatggg taggccggaa agatctttct cttcgttcga
      841 gatgacagaa catcggttcg cgatgaatac gctgaagttg tcattgcgag cgagaaatct
      901 ttcttctacc gacagcgaaa gtgttccagg cgctattaac caggaggtag gcacatgagt
      961 cattggccga agacgagaga aacattgaat gagatggtca accgtcattt cgatacaccc
     1021 gaataccatc agttgttcgc cgtgaagctg acgccggcgc ggcagaagat ctgggatctg
     1081 cactaccctc attatatcaa gagccgacgc gactgctggg gcgcggcggc ggtgcacgca
     1141 ccgctcgacg tcaagcgcgc catttgggag cacgaaaaag atgaattgat cttcgacaag
     1201 cgcatgggtt cggcgcacct gactgacgag cagatggcgg ccgccgcagc ggagtctaac
     1261 ttgcttccag gcgtgcgtgc cgcgctcatg gcgtggatgt atctgtcgac gacgcggcct
     1321 tggatcgaag cgttgacggt gaaccacatc accgagcgaa agaataatcc ggcgatcgtc
     1381 aagggcggcg gatttaccgc gcgcttcgca cacaaacgcg tcgccgatca gggcgggacc
     1441 atcgaagggc tcgatatcaa taccaaagtt cacatggtgg ccgacgaaga tcattcagac
     1501 atgtttgagc ccatctatga tcgtcatata acggacgagc gcactgcgca ggcggtgatc
     1561 cgctcggcgc aagatagcct ggccgtcgat cgggcgtatc gcagcgcctt ggcgaccgca
     1621 atggcacaga tcgcggaatc tgcggcggcg taagcgcgca gagtgcgtcc gttcaatgtt
     1681 caaaggttca aaagttcaag gtcagagtaa gaagtttctc aggctcggtg cacagcgctt
     1741 tcggtgcgtg ctttgtcgat ccgacttctt ccccctcgat gggggaagat tgagatgggg
     1801 gtgcttgaga ttgcaaagat caccccttcc ttaatccttc cccgtcgagg ggaaggagtt
     1861 gaagactgcg ccattgttat tgctgaaatt tatccagttg ccttaatccc gtggcacaac
     1921 atttttccgt cctcgccaag aacggcatag tcgcatcgag ccagccgctg gcgaccctcg
     1981 ccggtgtgca ggttctcatg aatggcggca acgcggtcga cgcggcgatc gcgaccgcgg
     2041 cagtcctcgg tgttgtcgag ccaagctcga tcggcatcgg cggtgacgcg ttcggtcttt
     2101 tttattccgc ccgagaccgt tcgataaagg cgctcgacgc gagcggccgg tcgccgtacg
     2161 cgatgaacct cgatttctcc cgcaagagcg gcttcaaaga aatgccgcag cgggggattc
     2221 attcggtcac agtgcccggc gcggtgcacg gctgggcgac gttactcaaa tctcacggca
     2281 cgaaatcgct gtcggacgtt ctgcaagcgg cgattcgcca tgccgaagaa ggtttcccag
     2341 ttgccgagct gacggcggag cagtggaaag aatccgcggc acggctgaaa gccgacgagg
     2401 gcggctcgat caattatgtt atcaacgggc gcgcgccgcg ggccggcg
//
LOCUS       DATIRS010000979         1646 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_763732, whole genome shotgun sequence.
ACCESSION   DATIRS010000979 DATIRS010000000
VERSION     DATIRS010000979.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1646
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_763732"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            59..>1646
                     /locus_tag="VLM90_12410"
     CDS             59..>1646
                     /locus_tag="VLM90_12410"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSQ13820.1"
                     /translation="MAKPEPTGDLTVWLSTQSPHRVRTDLATAIGFPEHRIRVIAPDV
                     GGGFGSKGLLYREYALASHLALKLGRPVKWIATRSEDFVTTNQGRDQVMTSELALKRD
                     GTMLGLKVRVVGNLGAYLNSLSAIPPLRMMAMAPGCYQIQNCSVEVMAVFTNTVPTGP
                     YRGAGRPESVLNIERLVDKAARELGMDRLEIRRKNFIRREQFPYRTGVNVEYDSGDYE
                     KSLAEALRLSDYEKLIQYRDEARKRGELVGIGLSTFAEPSGGAGFESATVRVERGGNI
                     TVLTGSSPHGQGHETVFSQVAAEKMRVAMDQVAIRHGDTLVVQEGGGTFGSRSAILGG
                     GALAIAIDRVVEKAQRIAAHLMEAAAEDIVQVDGGFAVAGVPDKKVSWRQIAVAAYAG
                     NVPRGTELGLQQTAFFDPKREAWGFGAHLALVRIDRDTGRPTLEKLVLVDDCGVVINP
                     MILNGQIHGGVAQGLGEALREQVLFGDDGEVSTGSLMNYAVPRASDMPELTLGETVTP
                     NPFNPLGVKGVGEAGCNGAPP"
BASE COUNT          320 a          469 c          546 g          311 t
ORIGIN      
        1 tcgcctgcgc atcgctagcc cgcgcttggt agcgatggca atggagccga gaggcatcgt
       61 ggcaaagccg gaaccgacgg gggatctgac tgtttggctc tcgacgcaga gcccgcaccg
      121 cgtgcgaacg gatctggcca ccgcgattgg atttcccgag cacaggattc gcgtcatcgc
      181 gcccgatgtc ggcggcgggt tcggcagcaa aggactcctc tatcgggaat acgccctggc
      241 cagccacctc gcccttaagc tcggccggcc ggtcaaatgg atcgccacgc gcagcgaaga
      301 tttcgtcacc acgaatcaag gccgggacca ggtcatgacg tccgagctgg cactcaagcg
      361 ggatggcacc atgctcgggt tgaaggtgcg cgtggtcggg aacttgggcg cttacctgaa
      421 ctccctttcc gcgatcccgc cgctgcgcat gatggcgatg gcgcccggct gctatcagat
      481 ccaaaactgc tctgtcgagg taatggcggt gtttaccaat acagttccta cgggtccgta
      541 tcgcggcgcg gggaggcccg agtcggtgct gaacatcgag cgcttggtcg acaaagcagc
      601 gcgagaatta ggcatggatc gtctggaaat ccgtcgcaaa aattttattc gccgcgagca
      661 gttcccctac cgcaccggcg taaacgtcga atacgactcc ggtgattatg aaaagtcgct
      721 cgctgaggcg ctacgtttat ccgactacga aaaactcatt cagtaccgcg acgaagcgcg
      781 caaacgcggc gagttggtcg gcatagggct atcgactttc gccgagccga gcgggggcgc
      841 cggttttgag agtgccacgg ttcgcgtgga gcgcggcgga aatatcacgg tgcttacagg
      901 ctcgagcccc cacggtcagg gccatgagac cgtgttttcc caggttgcgg cggagaagat
      961 gcgagttgcc atggatcagg tggcaattcg acacggcgac acactcgtag tccaagaggg
     1021 cggcggcacc tttggcagcc gcagcgccat cctgggcggc ggagccctgg caattgctat
     1081 tgatcgcgtc gttgaaaagg cgcagcgtat cgccgcgcac ttgatggagg cggcagccga
     1141 ggacatcgtt caggtggatg gtggcttcgc ggtggctgga gtgccggaca aaaaagtttc
     1201 ctggcgccag atcgccgtcg ccgcgtacgc cggaaacgtt ccgcgcggta ccgagcttgg
     1261 tcttcaacag acggcattct ttgatccgaa gcgcgaagcc tggggcttcg gcgcgcattt
     1321 ggcgctggtg agaatcgatc gggatactgg gaggccgacg cttgaaaaac tcgtcctcgt
     1381 cgatgactgc ggcgttgtca tcaaccccat gattctcaac ggacagattc acggcggcgt
     1441 ggctcagggc cttggcgaag cgcttcgtga gcaggtgctc tttggcgatg acggcgaggt
     1501 gagcaccggc tcgttgatga attacgcagt gccgcgcgcc agtgacatgc ccgagctcac
     1561 gttgggggaa acggtgacgc cgaatccgtt taacccattg ggtgtcaagg gcgtgggtga
     1621 ggcaggatgc aatggcgcgc cgcctg
//
LOCUS       DATIRS010000980         1938 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_370072, whole genome shotgun sequence.
ACCESSION   DATIRS010000980 DATIRS010000000
VERSION     DATIRS010000980.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1938)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1938)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1938
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_370072"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..761
                     /locus_tag="VLM90_12415"
     CDS             <1..761
                     /locus_tag="VLM90_12415"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13821.1"
                     /translation="LPLHIHLAETKAQQVQGNSIYGHSLLRHLDSLDIVSANLSCAHS
                     IWIEDADVELFAKRGATPVHNPASNLRIGSGLAKVKEFLAAGVNVGLGTDGAASNDNQ
                     NMFDAARLVSLIHNHAGSDFNHWVTPAQALAMASRNGARAFGLDAGVIAPGKLADIVL
                     LRRDTPAYRPMNDVVNQIVFCENGSNVDTVLVNGEVVVEGGRLTKVDEMEVLKRAEEA
                     RTRLEPSMQRELAAARSMEPALAEMYFRVFGKSA"
     gene            complement(897..>1938)
                     /locus_tag="VLM90_12420"
     CDS             complement(897..>1938)
                     /locus_tag="VLM90_12420"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HSQ13822.1"
                     /translation="LLGKLGMHEFAFGGPSLDAPFPAVRNPWNTAHIPGGSSSGSGAA
                     LAAGFCFGALGSDTGGSIRTPSSHCGVVGIKPTYGRCSRYGVIPLSWSLDHTGPMARS
                     VEDCAIMLQVLAGYDAKDNASAHVPVANFQAGMKDGVKGLRIGVPRKNWFDENLGIDP
                     QTEAAFNQALNVLERLGATVVDIDGKCFSLARKANQTILVCEAYTYHETTYQQTPLKF
                     GSSVRRRMLEGAFLSAADYLTAQRARAVLNEQIRANFANVDIFAVPGAARPPEAFDSM
                     DPNEQNLRPSFTNPFNLTGLPAISVPCGFTEGNLPAGWQIVAPAFEEATCFRVAYAYE
                     QATEWHKQRPVL"
BASE COUNT          383 a          567 c          609 g          379 t
ORIGIN      
        1 acttgccgct acatattcac cttgccgaaa ccaaggcgca gcaggttcaa ggcaatagta
       61 tctacggcca ttcgctcttg cggcatctcg attccctcga catcgtcagc gccaatctct
      121 cctgcgccca ttcgatctgg atcgaagacg ccgatgtcga gctattcgcc aagcgcggcg
      181 ctacgccggt gcataacccg gcgagcaacc tgcgcatcgg cagcggcctg gcgaaggtaa
      241 aggagtttct cgcggccggc gtgaatgtcg gattaggcac cgatggcgcg gcctccaacg
      301 acaaccaaaa catgttcgac gcggcgcgat tggtttcact gattcacaac catgccggca
      361 gcgatttcaa tcactgggtc acgcccgcgc aagccttggc catggcgagc cgaaacggcg
      421 cccgcgcctt cggtttggat gccggggtga tcgcaccggg aaagctcgcc gacatcgtgc
      481 tgctgcgccg cgacacgccg gcttaccggc cgatgaacga tgtcgtcaat cagattgtct
      541 tctgcgagaa cggcagtaat gtcgatacgg tgctagtcaa tggagaagtc gtcgtcgaag
      601 gcgggcgatt gaccaaagtc gacgagatgg aagtattaaa gcgtgccgaa gaagcccgca
      661 cccgcctgga gccatcgatg caacgagagc tcgccgccgc gcgcagcatg gagccggcgc
      721 tggcggaaat gtatttccga gtgtttggga agagcgcgtg aacgatatgc caaaaagctg
      781 cagcaacgtt acgacacggt aattgcttat tcagacgtta tttcggaaag gaggccgagt
      841 tttccaaccc ggccaggcgg acaggaatgt ccgccctcct gttgggctgc acgcgattag
      901 agcaccggcc gttgtttatg ccattccgtc gcctgttcat aagcgtaggc aacccggaag
      961 cacgtcgctt cctcaaacgc cggcgcgacg atttgccagc ctgccggtaa attcccttcg
     1021 gtaaaaccgc agggcaccga gatcgccggc aatcccgtta ggttaaatgg attggtgaaa
     1081 ctcggccgca ggttctgctc gttggggtcc atgctatcaa acgcttccgg tggcctcgcg
     1141 gcgccgggga cggcgaagat gtcgacgttg gcgaagttgg cgcggatctg ttcgttgagc
     1201 acggcgcggg cgcgctgggc ggtgagataa tcggcggcgc tcaggaacgc tccctcgagc
     1261 attcttcggc gcaccgagct gccgaacttc agcggcgtct gttgataagt cgtttcatga
     1321 taggtgtagg cttcgcagac caagatggtc tggttggctt tgcgcgccag tgagaagcac
     1381 ttcccgtcga tgtcgacgac cgtcgcgccg aggcgttcga ggacgttgag cgcttgattg
     1441 aaggccgctt cggtttgcgg atcgattcct aagttttcgt cgaaccagtt tttgcgcggc
     1501 acgccgatgc gcagcccttt gactccgtct ttcatgcccg cttgaaaatt cgccaccggc
     1561 acatgcgccg aagcgttgtc tttagcgtcg tagccggcca ggacttgcag catgatggcg
     1621 cagtcttcga cgctgcgcgc catcgggccg gtgtgatcta gggaccagct cagcgggatg
     1681 acgccgtaac ggctgcaacg gccgtaggtt ggtttgatgc cgacgacgcc gcaatgcgat
     1741 gacggggtgc gaatcgatcc gccggtgtcg gagcccaggg cgccgaagca gaagccggcg
     1801 gccagcgccg cgccggaacc gctactcgaa ccaccgggaa tatgcgcggt gttccaggga
     1861 tttcttaccg cagggaaggg cgcatccagc gacgggccgc cgaaggcgaa ctcgtgcatg
     1921 ccgagcttgc ccagtaag
//
LOCUS       DATIRS010000981         2885 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1942041, whole genome shotgun sequence.
ACCESSION   DATIRS010000981 DATIRS010000000
VERSION     DATIRS010000981.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2885)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2885)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2885
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1942041"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            629..769
                     /locus_tag="VLM90_12425"
     CDS             629..769
                     /locus_tag="VLM90_12425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13823.1"
                     /translation="MPRTESNGWRNLIATLGKSEAEMARLIDMSLLDELQREGFFEGM
                     DK"
     gene            913..1557
                     /locus_tag="VLM90_12430"
     CDS             913..1557
                     /locus_tag="VLM90_12430"
                     /inference="COORDINATES: protein motif:HMM:NF012478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HSQ13824.1"
                     /translation="MQVKRITWVAAAKISLSLMVMFAISFSVDAAEKAKNDLIVKDGM
                     LVSMDYTLKGTDGKVIDTNKGREPLKYVHGQKMMIPGLEKELTGMKVGGEKNVTVKPE
                     DAYGPINKNAFQEVPKEKLPANGLKVGAVLAAKSPEGQVVPMRVHEIKDSTVVMDMNH
                     PMAGKTLVFNVKIVDIQPAPPPAAAKPAAPAKPAEPAKPATPAQPAKPADPAIK"
     gene            1578..2327
                     /locus_tag="VLM90_12435"
     CDS             1578..2327
                     /locus_tag="VLM90_12435"
                     /EC_number="2.3.1.286"
                     /inference="COORDINATES: protein motif:HMM:NF014228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sir2 family NAD-dependent protein deacetylase"
                     /protein_id="HSQ13825.1"
                     /translation="MELEEFAARVRESQELVFFTGAGISTESGVPDFRSPGGVWTKYQ
                     PVLFQDFLASEAARVQHWQLKKATYELFKTVKPNIGHQAICEFEQRGQLLGLITQNID
                     GLHKLAGTADSRLVELHGTDRFVTCLKCGKAFQPADVYETWQEGLPTPTCDNCDGFLK
                     SANVSFGQSMPAEAMQRAQRWSEQADIFLVIGSSLQVQPAASFPVIAKRSGALLAIVN
                     RDPTPLDDLADFIHNGAIGEFFTQLKILLDH"
     gene            2475..>2885
                     /locus_tag="VLM90_12440"
     CDS             2475..>2885
                     /locus_tag="VLM90_12440"
                     /inference="COORDINATES: protein motif:HMM:NF017819.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF924 family protein"
                     /protein_id="HSQ13826.1"
                     /translation="MATIETILTYWFGANPGEAALAKDRADLWWSKNAEVDSEIRRRF
                     EGSLELAAEGKLDPWLAEPRGRLALIILTDQFPRNIYRDSPRAFSFDAKALAWSLEGI
                     EQRHDQLLQPIERAFFYLPLEHSELLEHQERSVLM"
BASE COUNT          680 a          888 c          774 g          543 t
ORIGIN      
        1 ggtccaacga ctatccgcac ggcaactcga cctggccgga atcaaagaaa tacatcgacc
       61 gcgacctcgg ccatctgccg gcggacatcc gtaagaagct ggtttacacc cacgtcaaga
      121 atctctatca gatggatatc ccgcacccgg ttcagtaggg agcggcagct tggtctggtg
      181 acccattggc gcgctggcgg acgagaaata gtctgacagc gcgctttttt ttctagcagg
      241 ctgctgaaaa ggacccatat gcttcgttgc gctcaatcgc ctcgcgtcaa cgtactgccg
      301 atgtacgcct ccgctcgtcg atttttcgcg cgccttgcct ctggatcttt taagcaacct
      361 gctaaaggtc acaagtcgga ggtcaaatat tccatgcgat catcgatcct caatcctcga
      421 ccctcgaccc tattaccact tggcgccctg ctggcaattc cggcaatcgc ccaaagacaa
      481 atcaaactac gcgaggctat gtcgaagcca tcggccgcat caaacgcagc cccgactcgg
      541 cttaccgcgc gctgtcgcgc tacaccggcg tcagcgacgc cgccgcctgg gagaaatccg
      601 caaattctac gccgacagct tcgccagcgt gccacgcacg gaatcgaacg gctggcgcaa
      661 tctcatcgct acgctgggca aaagcgaagc ggagatggcc cgcttgatcg acatgagctt
      721 gctcgatgag ctgcagcggg aaggattctt cgaagggatg gacaagtaga ctcgatttct
      781 cgctacatcg tcatcgccaa caaagacaaa tattctggcg aattgaaaca cccgattcgt
      841 tgagttcacc tgcgtcacca tgtacccttc atatacaatc taatcgcagt aattgcgtga
      901 gaggggaact aaatgcaggt taaacgtatc acttgggtcg ccgccgccaa gatttcgctg
      961 tcgctgatgg tcatgttcgc tatttcgttc tcggttgacg ccgcggagaa agccaagaac
     1021 gatctgatcg tcaaagatgg catgctggtg agcatggatt acacgctcaa gggcaccgac
     1081 ggcaaagtga tcgataccaa caaaggtcgt gaacctctca agtatgtcca cgggcaaaag
     1141 atgatgatcc ccggtctgga gaaagagctc accggcatga aggtcggcgg cgagaagaac
     1201 gtcacggtca aaccggaaga cgcctatggg ccgattaaca agaatgcctt tcaagaagtc
     1261 ccgaaagaaa aacttcccgc caatggtttg aaagtcggcg cggtactggc agcgaagagt
     1321 cccgaggggc aagtcgtgcc catgcgcgtc catgaaatca aagacagcac tgtggtcatg
     1381 gacatgaacc atccgatggc cggcaagact ctggtcttca acgtcaagat cgtcgacatc
     1441 cagccggcgc cgccgccagc ggctgccaag ccagcggcgc cggcgaaacc tgcggaaccg
     1501 gctaaaccgg caactccggc gcaaccggcc aaacccgcgg acccggcgat aaaataaccg
     1561 gaccaagtca ccagttcatg gagctcgaag aattcgccgc ccgagtgcgt gagtcgcaag
     1621 agttggtatt tttcaccggc gccggcatca gcaccgaatc cggcgtgcct gacttccgca
     1681 gccctggcgg agtctggacg aaatatcagc cggtgttgtt ccaagatttt ctcgctagcg
     1741 aagccgcgcg ggtgcagcac tggcagctca agaaagccac ctacgagctt ttcaaaaccg
     1801 tcaaacccaa catcggccac caggcgattt gtgaattcga acagcgcggt cagttgctcg
     1861 gcttgatcac gcagaatatc gacggcctgc acaagctcgc cggcactgcg gacagccgtt
     1921 tggtcgagct gcacggcacc gatcgtttcg tcacctgcct caagtgcggc aaggcttttc
     1981 aacctgccga cgtctacgag acgtggcaag aaggactgcc gacgccgacc tgcgacaact
     2041 gcgatggttt cttgaagtcc gccaatgttt ccttcggcca atcgatgccg gccgaagcca
     2101 tgcagcgcgc ccaacgctgg agcgagcaag ccgatatctt cctcgtcatc ggatcatcct
     2161 tgcaagtgca accggcggcc tccttcccgg tcatcgcaaa acgcagcggc gcgctcctcg
     2221 ccatcgtcaa ccgcgacccg acaccgctcg acgacctcgc cgacttcatt cacaacggcg
     2281 ccatcggcga attctttacc cagctcaaga tcctgctcga tcactaaata gcctcggaaa
     2341 atcattgtcc aagaacgccg taggcgagag attgccgtgc agaaatgcgc ttcatgccta
     2401 ccagctcact caagccaaag ctttcgtcga agggcggctc gcaaaccagc gccgcaggcg
     2461 cagctactga cagaatggca accatcgaaa ccatcctcac ctactggttc ggcgccaatc
     2521 ccggcgaagc cgcgctggcc aaagaccgcg ccgatttgtg gtggtcgaaa aacgccgaag
     2581 tcgacagcga gattcgccgg cggttcgagg gcagccttga gctcgccgcg gagggaaaac
     2641 tcgacccgtg gctcgccgag ccgcgcggcc ggctcgcgct gatcattctt accgatcaat
     2701 ttccgcgcaa catctaccgc gattcgccgc gggcattcag cttcgacgcg aaagcgctgg
     2761 cgtggagtct cgaaggcatc gaacagcgcc acgaccaatt gctacagccc atcgagagag
     2821 ctttcttcta tctgccgctg gagcattcag aactgctgga gcatcaagag cggtcggttc
     2881 ttatg
//
LOCUS       DATIRS010000982         1575 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1845387, whole genome shotgun sequence.
ACCESSION   DATIRS010000982 DATIRS010000000
VERSION     DATIRS010000982.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1575
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1845387"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(124..519)
                     /locus_tag="VLM90_12445"
     CDS             complement(124..519)
                     /locus_tag="VLM90_12445"
                     /inference="COORDINATES: protein motif:HMM:NF014662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XdhC family protein"
                     /protein_id="HSQ13827.1"
                     /translation="MAGPGACYTDADLDAKKKDSIYHQVNEFLAKGETVAVATIVSAK
                     GSTPREVGAKMVVTAWGEILGTIGGGCGEADVKREAIEVIRSRKPRTVRVDLLDDISS
                     DSPAVCGGIMNVFIDPWWQERDQEAASGK"
     gene            complement(636..>1575)
                     /locus_tag="VLM90_12450"
     CDS             complement(636..>1575)
                     /locus_tag="VLM90_12450"
                     /inference="COORDINATES: protein motif:HMM:NF017569.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HSQ13828.1"
                     /translation="QSYERVPMETMDIQGTPTESQAPEGGDEEGGMEEATTEAIANEN
                     LPLENLDEFAVPTYSAQELMNRKDFSEMGTEESRAIARAILLIATKIATQISRRKKIG
                     RKGPVIDPRTTMRRSMKFGGEVIEMSHRKRRIKKTKVVLLCDVSGSMDCYSRFLIQFM
                     YGLQNELWGVETFVFSTSLSRITHLIRTKNIVDALDKISGTILGWSGGTNIGRSLHTF
                     NRNFAPSMVTHRTVVVIISDGWDRGDVSLLEKEMQDIKRRAKKIIWLNPLLASENYEP
                     LCKGMQAALPYLDLFLSVHNVNSLVSLGRTLQKMVA"
BASE COUNT          302 a          494 c          421 g          358 t
ORIGIN      
        1 cgtcgcggat cagacacttg gctccgggct ggatcggccc atcgccgtgc acctcgacga
       61 cggtcactag gaccgccgct tcaccttgct cggcgatttt gaccaattct tcggacagcg
      121 aactcatttg ccgcttgccg cctcctgatc gcgctcctgc caccagggat cgatgaagac
      181 attcatgatg ccgccgcaca ccgccgggct gtccgaggaa atatcgtcga gcaaatcgac
      241 gcgcaccgtg cgcggcttgc gcgagcggat cacttcgatg gcttcacgct tgacatcggc
      301 ctcgccgcaa ccgccgccga tggtgccgag aatctccccc cacgccgtca ccaccatttt
      361 ggcgccgact tctcgcggcg tcgagccctt ggccgaaaca atggtcgcca ccgccacagt
      421 ctcgcccttg gcgagaaact cgttgacctg atgatagatc gagtctttct tctttgcgtc
      481 taagtccgcg tccgtgtaac aagcgccggg tccagccatg ttcagacctc ctgtttagaa
      541 tcgaggatag aagattgaag atataaaatg gcgcgataac cgcaccactc cgaatccgtc
      601 attttccatt ctcaattatc cattatcaat tctaatcacg ccaccatctt ctgcaaggtc
      661 cgcccaagcg aaaccaaact attgacgttg tggaccgaca aaaacaaatc caaatacggc
      721 aaagcggcct gcatgccttt gcacagcggc tcgtagttct cgctcgccag caagggattg
      781 agccagatga ttttcttggc gcgccgcttg atatcctgca tttccttttc cagtaaactg
      841 acgtcgccgc ggtcccagcc atcgctgatg atcaccacca ccgtgcggtg cgtcaccatg
      901 ctcggcgcga agttgcggtt gaaagtgtgc aacgagcgcc cgatgttggt gccgccggac
      961 cagccgagga tcgtgccgga aatcttgtcc aatgcatcga cgatattctt ggtgcggatc
     1021 agatgggtga tccggctgag cgaagtgctg aacacaaaag tctcgacgcc ccatagctcg
     1081 ttctgcagac cgtacatgaa ctgaatcaaa aaccggctgt aacagtccat cgagccgctg
     1141 acgtcgcaca agagcacgac tttggttttc ttgatgcgcc gtttgcggtg cgacatctcg
     1201 atcacttcac cgccgaattt catgctgcgc cgcatggtcg tgcgcggatc gattaccggc
     1261 cctttgcggc cgatcttctt gcgccggctg atctgggtgg cgatcttggt ggcgatgagc
     1321 aggatcgccc gggcgatggc gcggctttcc tcggtgccca tctcgctgaa gtccttgcgg
     1381 ttcatcagct cttgcgcgct ataggtcggc acggcgaact cgtcgagatt ctcgagcggc
     1441 aggttctcgt tggcgatcgc ctcggtggtg gcctcttcca tgccgccttc ctcatcgccg
     1501 ccttccggag cttgggactc ggtgggcgtg ccttgaatat ccatggtctc catcggcacg
     1561 cgctcataac tttgc
//
LOCUS       DATIRS010000983         3127 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_566292, whole genome shotgun sequence.
ACCESSION   DATIRS010000983 DATIRS010000000
VERSION     DATIRS010000983.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3127)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3127)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3127
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_566292"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..914)
                     /locus_tag="VLM90_12455"
     CDS             complement(<1..914)
                     /locus_tag="VLM90_12455"
                     /inference="COORDINATES: protein motif:HMM:NF024971.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent metalloprotease family protein"
                     /protein_id="HSQ13829.1"
                     /translation="MNRFKSTMRRLVILGSIAVIAGQLDASAIAQSHPHLFRQRPVAV
                     QPERNASVASIGDVDHNLLASNPERMTIVVPGKADLLIDRHHHDQRSADNMVWRGQAD
                     DDPSSKVTLTLHNGILLGHIQSGNEIYALRPGRDGRTIIEKIDTDSFNPEWGHDHRTH
                     GHDKVPPRRAGAADLSATSNTNVPASAAATTTTEIVLMSVYTPQARAAAGGLVQIQAQ
                     IQAAVDQANTAFINSNMIARYRLAHTAEVAYDDSGNIDSDLNWVTGNAAVASLRNTHS
                     ADMVSLITENGGGYCGIGWVQRNPGAGFA"
     gene            1439..>3127
                     /locus_tag="VLM90_12460"
     CDS             1439..>3127
                     /locus_tag="VLM90_12460"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HSQ13830.1"
                     /translation="MLSGLDPDWQILPLAESCPAEDCGLAVVVVDQLERLDESWRAAI
                     RDHRARLLYVVGPGGGVVPHASGLPIFAVVQIAAPAPVLGSQIRTAFDNLLLSRRQSE
                     IEKQVQRTQSEIDRLNEIGIALSSQHDRESLLNLILQKSREISQSDAGSLYLVEDDGA
                     GGRRLRFTQTQNDSIQEPMAETYLPIDHASIAGYVALTGTELVLDNVYQIPRDLPFTF
                     NASYDEEYGYRCKSMLAVPMKNPQGEIIGVVQLINCKRDAALRVDQRSVDAVVVPFPK
                     QCRPILRSLASQAAVAVENIRLYESIETLFEGFVRASVTAIESRDPTTSGHSFRVADL
                     TLGLAQAVDRADTAPFRDVRFNRDEMKELRYASLLHDFGKVGVREQVLVKAKKLYPGQ
                     LELIQQRFAYARKALEHAQSERQLAYLLDKGRDEFLRQQPGFQGELAAELLDLDELRG
                     FIVRCNEPTLLHEGNFARLALGAARQVADADGRPLALLLPQEARLLAIPQGSLDEAER
                     LQIQSHVDHTQNFLRQIPWTKEIKNVAEIAGAHHEKLDGTGYPHSLAAQDIPMQS"
BASE COUNT          592 a          871 c          984 g          680 t
ORIGIN      
        1 gcgaaaccag cgccaggatt tctttgcacc cagccgatgc cgcaataacc gccgccgttt
       61 tcggtgatca gcgacaccat gtcggccgag tgggtattgc gcaaggaggc gacggctgcg
      121 ttaccagtga cccaattcaa gtcggagtca atattgccgg aatcgtcgta ggccacttca
      181 gcggtgtgcg ccaagcggta acgcgcgatc atgttactgt tgataaaggc tgtgttggct
      241 tgatcgaccg cggcttgaat ttgcgcttgg atttgcacta aaccgccagc agcggcgcga
      301 gcctggggcg tgtagaccga catcaagaca atttctgttg tcgttgttgc tgctgcgctg
      361 gcgggcacgt ttgtattgct ggtggcgctt aggtcggccg ctccagcgcg ccttggcggg
      421 actttatcgt ggccatgggt acgatggtca tggccccatt cggggttaaa actgtcggtg
      481 tcgatttttt cgatgatcgt gcggccatcg cgtccgggac gcaacgcata gatttcgttg
      541 ccgctctgta tatggccgag gagaatgccg ttatggaggg tcaaagtcac cttgctgctt
      601 gggtcgtcgt cggcctgacc gcgccatacc atgttgtccg cgctgcgctg gtcgtgatgg
      661 tgacggtcga tcagcagatc ggctttgccg ggcacgacga tcgtcatgcg ctcggggtta
      721 ctggcaagga ggttgtgatc aacgtcgccg atggacgcca cgctggcatt gcgctccggc
      781 tgaacggcca ccggccgttg gcgaaacagg tgagggtggg attgggcgat ggcgctggcg
      841 tcgagttggc cggctatgac tgcgatgcta ccgaggatga ctaatcgtcg catcgttgac
      901 ttaaatcggt tcatggttgc gatcctttcc actttttttc attgtcccag ggcgaagatc
      961 cgccaggagc tcgtgaatct gatttgcctc ggtgtacgtg gcggagcatt gctcgtgcca
     1021 ccttcccggc gaatttgtct gcgtccgggt gcaccccaat tggcagaatt ttcggctgtg
     1081 agccggtttg ggttatagct ggaggctatg tgggccgacc aaaatcgtcc gtggcgatgg
     1141 cgccaagcgc caattgtcca gcatttggcg ggatcagcgg ctgattcgtt gagcgaatat
     1201 tttggcggtc gcgaggtatg cttgatcgag ccccttttgg gcgcgaccct agcccagttg
     1261 agtaggctgc cgctatcgga tagttttgtc tggtctaggc aacggtgccg tgaatcccat
     1321 gaaacttaac catccatccg ctggcgaatc tgattcagcg gaaacccaag gacgtggaga
     1381 ttcccctcga gccgacctgg ggcggcaaat ttattaccaa cgtgacggtt gggcggcggt
     1441 gctcagcggg cttgatcctg actggcagat tctgccgctg gcggaaagtt gcccggccga
     1501 ggattgcggt cttgctgtgg tggttgtcga ccagttggag cggctcgacg aaagttggcg
     1561 cgcggcaatc cgcgaccatc gcgcgcgatt gttatacgtt gttgggccag gtggcggggt
     1621 cgtgccgcac gcgagcggcc tgccgatttt cgcggttgtg cagatcgccg cgccggcgcc
     1681 ggtcttgggc agtcagattc gcactgcctt cgataatcta ttgctgtcgc gccggcagag
     1741 cgagattgaa aaacaagttc agcgcactca gagcgagatc gaccggctga atgagatcgg
     1801 catcgcgctg tcatctcagc atgaccgcga atcgttgctc aatttgatcc tgcagaaaag
     1861 ccgggagatt agtcagagcg acgccgggtc gctgtacttg gtcgaggacg acggcgccgg
     1921 cgggcgccgg ctgcgtttta cccagacgca aaacgacagc atccaagagc cgatggccga
     1981 gacctatttg ccgattgatc atgccagtat cgctggatac gtcgcgctca ccggcacgga
     2041 gttggtattg gacaatgttt atcaaattcc tcgcgacttg ccgttcactt tcaatgccag
     2101 ctatgacgag gaatacggct accgctgcaa atcgatgctc gccgtgccga tgaaaaatcc
     2161 ccaaggggaa atcatcggcg tggtgcaact gatcaattgc aaacgtgacg cggcgctccg
     2221 cgttgatcaa cggagcgtgg atgcggtggt ggtgcccttt cccaagcaat gccgaccgat
     2281 tttgcgttcc ctggcgagcc aggccgcagt ggcggtcgag aacatccgcc tctatgaaag
     2341 catcgagact ctcttcgagg gtttcgtgcg cgcgtcggtc acggccatcg aatcgcgcga
     2401 cccgaccacg tccggccatt cctttcgcgt cgccgatctg accctcggcc tggcgcaagc
     2461 cgtagaccgc gccgacaccg cgccatttcg cgatgttcgc ttcaaccgcg atgagatgaa
     2521 ggagctacgc tacgcctcgc tgctgcatga cttcggcaag gtcggtgtgc gcgaacaggt
     2581 gctggtcaaa gcgaaaaagc tatatcccgg tcagctcgaa ctgatccaac aacgcttcgc
     2641 ctacgcgcgc aaagctttgg aacacgcgca gagcgaacgc cagcttgcct acctactcga
     2701 caaagggcgg gacgagtttc tgcgccagca gccggggttc cagggcgaat tggcagccga
     2761 gctgctggac ctcgatgagc tgcgcgggtt tatcgttcgc tgcaacgagc cgacgttgtt
     2821 acatgaaggt aactttgcgc gcttggccct gggggcagcg cggcaagtcg ccgacgccga
     2881 tgggcggccc ttggcgctat tgttgcctca ggaggcgcgc ctgttggcga tcccacaggg
     2941 cagtctcgac gaggcggaac gcttgcaaat tcaatcccac gtcgatcaca cgcagaattt
     3001 cctacggcaa atcccctgga ccaaggaaat caagaacgtc gccgagatcg ccggggcgca
     3061 tcatgagaaa ctcgatggca cgggttaccc gcacagtctg gcggcgcagg atatcccgat
     3121 gcagtcg
//
LOCUS       DATIRS010000984         1614 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1059154, whole genome shotgun sequence.
ACCESSION   DATIRS010000984 DATIRS010000000
VERSION     DATIRS010000984.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1059154"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..258
                     /locus_tag="VLM90_12465"
     CDS             <1..258
                     /locus_tag="VLM90_12465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13831.1"
                     /translation="LIPGHDNTVRINGRVTVVDRAEMKDVQLEVFNADDKAEVLQGLL
                     IDVDGSYSHCPRAVKFSKLWDTELIAKNIVAPLLPPKEPGI"
     gene            373..>1614
                     /locus_tag="VLM90_12470"
     CDS             373..>1614
                     /locus_tag="VLM90_12470"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HSQ13832.1"
                     /translation="MARLNPKINAIVAKLPDEECLALADEADRRIARGEAVGPLHGLP
                     FAFKELDPVVGFPMTRGSLIFKDFMPTEDSVLAERLRLAGVVPIGKTNISEFGMGSHS
                     YNEVYGTTLNPYDLTKSAGGSSGGAGAALAAGLLPLASGSDLGGSLRNPAGFNNIVAL
                     RPSVGLVPTAPVALPFLGFTVKGPMARSVADTAFLLSVMAGADPRDPACYPSDPRVFA
                     EPLEREFKDIRVAWCLDLGGLPLDRRARAVLAVQRQTFVDLGCAVEDAVPDLSGADEA
                     FLTLRAWNYWHTLGPLLEQHRNKMKPEAVWQIESGRNLSGDDIAGAMHLQGELMQRMR
                     RFHEKYDFLICAVNQLPPFDASIDWPREIEGVRMATYLDWMKSAYWITPTFCPAISLP
                     AGFSPEGLPVGVQLIGRYRDDF"
BASE COUNT          307 a          467 c          485 g          355 t
ORIGIN      
        1 ctcatccccg ggcatgataa tactgttcga attaacggcc gcgtgacggt cgtcgaccgc
       61 gccgaaatga aagacgttca gctcgaagtc ttcaacgccg acgacaaggc cgaggttcta
      121 caaggtttgc tcatcgacgt cgatggatcc tacagccatt gcccgcgcgc ggttaaattc
      181 tccaaacttt gggataccga gctgatcgca aaaaacatcg ttgcgccact tttgcctccg
      241 aaagaaccgg gaatctagct tccccgagtg atggatcggg atctctgctt caccagcgcc
      301 cgtgaactgg cggcttcgat tcgccgccga tcgatttcgg cgcgggaagt catggcggcg
      361 tttctcgcgt agatcgcccg gctcaatccc aagatcaacg ccatcgtcgc caagctgcct
      421 gacgaagagt gtctggcatt ggcggatgaa gcagatcggc gaattgcccg cggcgaggct
      481 gtcgggccgc tgcacggatt gcctttcgct ttcaaagaac tcgacccggt cgttggtttt
      541 ccgatgacgc gcgggtcgtt gatcttcaaa gatttcatgc ccactgaaga ctcggttctt
      601 gccgaacggc tgcgccttgc cggcgtggtg ccgatcggca aaaccaacat ctccgagttc
      661 ggcatgggct cgcatagtta caacgaagtg tacggcacaa ccctcaatcc ctacgatttg
      721 actaagagcg ccggtggatc gagcggtggc gctggtgcag cattggcggc cggtctgctg
      781 ccgctagcca gcggtagcga cctcggcggt tcgctgcgca atccggcggg cttcaacaac
      841 atcgtcgcgt tacgcccgag tgtcggactg gtccccactg cacccgtggc tctaccattc
      901 ttgggtttta cagtgaaagg accgatggcg cggtcggtgg cggacacggc gtttttgctg
      961 agtgtaatgg ccggggccga cccgcgcgat ccggcttgtt atccgtccga cccgcgcgtg
     1021 tttgccgaac cgttggagcg tgagttcaaa gacattcgag ttgcctggtg tctggatcta
     1081 ggcggcttgc ccctcgaccg acgggcgcgc gcggtgctgg ctgttcagcg ccagacgttt
     1141 gtcgatctag gctgtgccgt ggaagatgca gtgccagact tgagcggcgc cgacgaagcg
     1201 tttttaactc tgcgcgcttg gaactactgg cacacgcttg ggccgctgct tgaacaacat
     1261 cgcaacaaaa tgaaacccga agcggtttgg cagatcgaat cggggcgcaa cctcagcggg
     1321 gacgatatcg ctggagcgat gcatctacag ggtgagctca tgcagcgcat gcgccgcttt
     1381 catgaaaaat atgattttct tatctgcgcc gtgaaccagc tgccgccctt cgacgccagc
     1441 attgattggc cgcgcgagat cgaaggtgtg cgaatggcga cctatcttga ctggatgaag
     1501 tcggcctatt ggatcactcc gacattctgt ccggcgattt ccctgcctgc cggatttagc
     1561 ccggagggat tgcccgtggg ggttcagctt atcggccgtt accgcgacga tttc
//
LOCUS       DATIRS010000985         1752 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1157729, whole genome shotgun sequence.
ACCESSION   DATIRS010000985 DATIRS010000000
VERSION     DATIRS010000985.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1157729"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(86..1066)
                     /locus_tag="VLM90_12475"
     CDS             complement(86..1066)
                     /locus_tag="VLM90_12475"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13833.1"
                     /translation="MRSSILHLLFSAVLLVTALLSAPAPLTAQLSKLRASYAGTTGYH
                     LPMWVQKQEGLDKKYGLDMEILLIAGGSRIIQTLLSGELLLTHSGASTVARAGIAGAD
                     LTMIATVMNQVNWRIVARKEIRDVKDLVGKKIAIASRGGSSELGLQLAFKKWGLDFNR
                     VTLLSLGPSPTRMAALREGVVDATVFAYPELLIATKEGFPTLADLRPYADLTDTSVVV
                     TRGALEKQRPVLKRFLQGYIEAIARIKRNPESAYRALARYTGVSDAAALEETRQFYAD
                     SFASIPRTEVNGWRNLIATLGKSEAEMARFIDMSLLDELQREGFFERVSK"
     gene            complement(1117..>1752)
                     /locus_tag="VLM90_12480"
     CDS             complement(1117..>1752)
                     /locus_tag="VLM90_12480"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ13834.1"
                     /translation="RDLLHDRGIDIPQSHERQGGVVKLIAGKRPVPIYISAEGPKTLR
                     VAGRTCDGIILGTGFDKHVTDWARQRVAEGAKDEGRNLAEIDIMPAGMIVVDDNGDLA
                     RQRVRSRMANRAHHNFRFTMETVPEGEAAGIQKFMDNFDISKPIEERIDPKFVTDYLL
                     DRFTIAGTPGECIAKVKRLEADGVKRILLTPPNTIYDQVMDKWGNEVIRKC"
BASE COUNT          305 a          500 c          550 g          397 t
ORIGIN      
        1 ccctctcttc gttcggcatg acaaacctcg caaagctgtc atttcgagcg cagcgagaaa
       61 tctctgcaat tggcaaaaag cgagtctact tgctcacgcg ctcgaaaaaa ccttcacgct
      121 gtagctcgtc gagcaaactc atgtcgatga agcgcgccat ctccgcttcg cttttgccga
      181 gcgtcgcgat cagattgcgc cagccgttga cctcggtgcg cggtatgctg gcgaagctgt
      241 cggcgtagaa ctgtcgcgtt tcttccaacg cggcggcgtc gctgacgccg gtgtaacgcg
      301 ctagcgcgcg gtaggccgac tcggggttgc gcttgatgcg ggcgatggcc tctatgtagc
      361 cttgaaggaa tcgtttcaac accggccgct gtttttccag cgcgccgcgg gtgaccacga
      421 ccgaagtgtc ggtcagatcg gcgtaggggc gcaggtcggc gagggttgga aatccttctt
      481 tggtggcgat cagcagttcc ggataggcga agaccgtggc gtcgaccacg ccttcgcgca
      541 aggcagccat gcgcgtcgga ctcgggccga ggctcaggag cgtgactcga ttaaaatcca
      601 agccccattt cttgaaggcc agctgcaagc ccaactcgct cgagccgccg cgcgaggcga
      661 tggcgatttt cttgccgaca agatctttga cgtcgcggat ctctttgcgc gcgacgatgc
      721 gccagttgac ctggttcatg acggtggcga tcatcgtcag atcggcgccg gcgatgccgg
      781 cgcgggcgac ggtggaggcg ccggaatggg tgagcagcag ttcgccgctc agaagtgttt
      841 ggatgatcct tgacccaccg gcgatgagca ggatctccat gtcgagtccg tatttcttgt
      901 ccaacccttc ctgcttctgc acccacatcg gcagatgata gccggtggtg ccggcgtagc
      961 tggcgcgcag tttggacagt tgcgctgtga gcggcgcggg agcgcttagc aacgcggtga
     1021 ctagcagtac ggccgagaat agaagatgga ggatcgaaga tcgcattttc atcgcctctg
     1081 agttctttct attgcctgtt gcctgatgcc tattgcctag catttccgga tcacttcgtt
     1141 gccccacttg tccatgactt ggtcgtagat ggtgttgggc ggtgtgagga ggatacgttt
     1201 cacgccatcg gcttcgagcc gtttcacttt ggcgatgcat tctccgggcg tgccggcgat
     1261 ggtgaagcgg tccagtaaat aatcggtgac gaatttggga tcgatccgtt cttcgatcgg
     1321 tttcgaaatg tcaaagttat ccatgaattt ttggatgccg gcggcttcgc cttcaggcac
     1381 cgtctccatg gtaaagcgga agttgtgatg ggcgcggttg gccatgcggc tgcgcacccg
     1441 ctggcgcgcg aggtcgccat tgtcgtcgac gacgatcatg ccggcgggca tgatgtcgat
     1501 ctctgccaga tttcgcccct cgtctttggc gccctcggca acgcgctggc gcgcccagtc
     1561 ggtgacgtgc ttgtcgaaac cggtgcccaa aatgatccca tcgcaggtgc gcccggcgac
     1621 gcgcagggtc ttcggccctt ccgccgagat atatatcggc actggccgct tgccggctat
     1681 taatttaacc acgccgcctt ggcgttcatg gctctgcgga atgtcgatgc cgcggtcatg
     1741 gagcaggtcg cg
//
LOCUS       DATIRS010000986         1681 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1942261, whole genome shotgun sequence.
ACCESSION   DATIRS010000986 DATIRS010000000
VERSION     DATIRS010000986.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1681
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1942261"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..612
                     /locus_tag="VLM90_12485"
     CDS             <1..612
                     /locus_tag="VLM90_12485"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HSQ13835.1"
                     /translation="NTNALCIHRYPEAVKAVHERGHEIVGHSYAEDIQLTQLTAEGEL
                     DDIRTCAKMFEDFTGVRPTGWLTSGMRHTERTLGILAEEGFAWHGDAVNDDNPYPAVV
                     NGKTMIIVPYKNAVSGLNDTGMYRRGITARDVFNSFKDEFDLLYEESATDPKMLTLAM
                     HCQMAFPATGKVYDDCIKYAKSFPDLWFAKRCEIVEWVKKNCM"
     gene            712..>1681
                     /locus_tag="VLM90_12490"
     CDS             712..>1681
                     /locus_tag="VLM90_12490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13836.1"
                     /translation="MCDTADDGVGLSSSIPRELKLRNKGLRSADISPLMPFARQLANS
                     RESRNSHIGFVGYDKTKAGNKILIAIDREYDLDVPHAVAAALREKGAHVDLLVADMGE
                     PDRVFDYTDEVDVIMRREPWENKPRRWEGMPYIENFALRGGYDLLIHGKGGPIPQTEF
                     RYEHIPWLRAEHFLQRSTTYPLDLHLLINKKTWDPIWEYGRAGRARLTDAEGTDISWT
                     YWDEYYDGTRYGFSSTPRNGHLFGHPVPPIIAKEDAAGVVAGTTSHFSKAFPQVKVEL
                     EGGQVVKVHGGAAYGDAWRTLLDESRHTQYPCFPRPGLFYLWEVAIG"
BASE COUNT          365 a          483 c          489 g          344 t
ORIGIN      
        1 aacaccaacg cgctatgcat ccaccgctat cccgaagcgg tgaaggcggt gcacgagcgc
       61 ggccatgaga ttgtcggtca ttcctatgcg gaagacattc aactcacaca gctgacggcg
      121 gaaggagagc tcgacgatat ccgcacctgc gccaagatgt tcgaggattt caccggcgtg
      181 cgacccaccg gttggctgac ctccggcatg cgtcacaccg agcgcacgct gggcatcctc
      241 gccgaagagg gtttcgcctg gcatggcgac gccgtcaacg acgacaatcc ttatcccgct
      301 gtcgtcaacg gtaaaaccat gatcatcgtg ccgtacaaaa acgccgtcag cggtttgaac
      361 gataccggca tgtaccggcg cggcatcacg gcgagagatg ttttcaattc gttcaaggac
      421 gagttcgatc tgctttatga ggagtccgcg accgacccga agatgttgac cttggcgatg
      481 cactgccaga tggcgtttcc ggcgacggga aaagtctatg acgactgcat caagtacgcc
      541 aagtcatttc ccgatctgtg gtttgccaag cggtgtgaga ttgtcgagtg ggtgaagaag
      601 aactgcatgt gagaagaatg gagtgatgga gtgttgagta atgggtttct gaattttccc
      661 gacccaccac tccaccactc catcactcca atttttccgg gaggtgcttc catgtgcgac
      721 acagccgatg atggcgttgg gcttagtagt tcaattccgc gggaattaaa gctgcgcaat
      781 aagggactgc gatcagccga tatttcgccg ttgatgccgt tcgcacgaca gcttgccaac
      841 tcgcgcgaga gccgcaacag ccatatcggc tttgttggtt acgacaagac caaggcgggc
      901 aataaaattc tcatcgccat cgaccgcgag tacgatctcg acgtgcccca cgccgtggcg
      961 gcggcgctgc gcgagaaggg tgcccatgtc gatttgctgg tcgccgatat gggcgagccc
     1021 gatcgcgtgt tcgactacac cgacgaagtc gacgtgatca tgcgccgcga accgtgggag
     1081 aacaagccgc gccgttggga aggcatgcct tacatcgaga acttcgccct gcgcggcggt
     1141 tatgatttgc taatccacgg caagggcggg ccgattccgc aaaccgaatt tcgctacgaa
     1201 catattccat ggttacgcgc cgagcatttc ttgcagcgct caacgaccta tcctctcgat
     1261 ttgcatctgc tcatcaacaa aaaaacttgg gacccgatct gggagtacgg ccgcgccggc
     1321 cgcgcgcggc tgaccgatgc cgaagggacg gatatctctt ggacctactg ggacgaatat
     1381 tacgacggca cgcgctacgg attctcctcg acgccgcgca acggtcatct gttcggccat
     1441 ccggtgccgc cgatcatcgc caaggaagac gccgctggcg tggttgccgg cacgacgagc
     1501 catttttcga aagcctttcc ccaggtcaaa gttgagctgg agggtggtca ggtggtgaaa
     1561 gttcacggcg gcgcggctta cggcgacgct tggcgcacac tgctcgacga aagtagacat
     1621 acccagtatc cctgctttcc gcggccgggc ctgttctatc tctgggaagt agccatcggc
     1681 a
//
LOCUS       DATIRS010000987         1945 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1551098, whole genome shotgun sequence.
ACCESSION   DATIRS010000987 DATIRS010000000
VERSION     DATIRS010000987.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1945)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1945)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1945
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1551098"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..392)
                     /locus_tag="VLM90_12495"
     CDS             complement(<1..392)
                     /locus_tag="VLM90_12495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13837.1"
                     /translation="MNLQKILLLTVILQTAALPASAAEPFNIAACATVTAADAEKFIG
                     APLDVNKIDKKIMLNAPWTHDSLCTYLPQGVKSDDPTEIARFLDVSLRFFPTAETAQS
                     IHQATLEQFRKMAGSPDAPFKILAITPL"
     gene            complement(462..1046)
                     /locus_tag="VLM90_12500"
     CDS             complement(462..1046)
                     /locus_tag="VLM90_12500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13838.1"
                     /translation="MIGTISKVFAHVIFVAIYLGLSPADIAAQDITACGVVNGDNAQK
                     FVGGPLDVKETASAPIGNAPGAYSSVCTYVARGTEVEKALTAPRLLDLTLHFLDSPDS
                     MSIIFANSVIEYNRLALSPEAPFKNATITPLPGFGDKAFVFEAITDPTSGYKSALIVF
                     YKGRIGGSIAAWKKPEPALETSKVVLQFILSRLP"
     gene            complement(1077..>1945)
                     /locus_tag="VLM90_12505"
     CDS             complement(1077..>1945)
                     /locus_tag="VLM90_12505"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13839.1"
                     /translation="IVAKEVGLFKKHNLDPTLVFTTGGSLGIQAMLGGDVAMTLSDGS
                     SSVGSKLAGVDVLVIASLLNTFPYSLISLPEIKKVDQLRGAKIAVSRFGSATDLSVKM
                     ALARLGLNAEKDVTLLQIGVQTARYAAMVSKNVQATIITPPFTLTARKAGMNTLIDMA
                     ELNIPFQLTGMLALRPYLKNNPDMVLSVIRVLSEGIHFYKREKEATLKILGKYLKTDD
                     REALEETHREIAVKSLPEKPYPTLAGIKTILDETALRNPKAKGMRPEDFVDSSFVKKV
                     DDEGLFERLYRR"
BASE COUNT          388 a          520 c          576 g          461 t
ORIGIN      
        1 tcgaggggtg tgatggcgag gattttgaat ggcgcatctg gactgccggc catcttgcga
       61 aactgctcaa gggttgcttg atgaatcgat tgcgccgtct cggccgtggg gaaaaatctt
      121 aaactgacat cgaggaagcg ggcgatctct gtggggtcgt ctgacttcac gccctgcggc
      181 aggtaagtgc atagggagtc atgcgtccat ggcgcgttga gcatgatctt cttgtcgatc
      241 ttgtttacgt ctaatggcgc gccgataaat ttctcggcgt ccgccgccgt gacggtggcg
      301 caggctgcta tgttgaaagg ctcggccgcg ctggcgggca aggcggcagt ttggagaatt
      361 acggtcagca gcaggatttt ttgtaggttc atagatctgc cctgcctgga tgaacgagtt
      421 cttgcgctgt ggtgcgtgat cgttgttcga ttggccaact gttacggcag ccggctgaga
      481 atgaattgca aaaccacttt gctggtttcc aacgccggct cgggcttttt ccaagcggcg
      541 atgctgccgc cgatgcggcc tttgtaaaaa acgatcagcg ccgatttata gccggacgtg
      601 ggatcggtga tggcttcgaa gacgaaagcc ttatcgccaa agccggggag gggagttatc
      661 gtcgcgtttt tgaacggggc ttccggcgag agtgccagtc ggttatattc gataaccgaa
      721 ttcgcaaaaa tgatgctcat cgagtccggc gaatctaaga agtgcaaggt cagatcgagc
      781 aagcgcggcg ccgtgagcgc cttttccact tccgtaccgc gggcgacgta agtgcagacc
      841 gaactgtagg cgcccggcgc gttgccgatc ggcgcactag cagtttcctt cacatccagc
      901 ggcccgccga cgaacttttg cgcattgtcg ccgttcacca caccgcacgc ggttatgtcc
      961 tgagcggcga tgtcggccgg gctcagccct agatagattg ccacgaatat gacatgggcg
     1021 aaaaccttgc tgattgtacc gatcatccct tcctcctcga aaaggctttc gcaaatttag
     1081 cgtcgataca ggcgctcgaa cagtccttca tcgtcgactt ttttcacgaa actggagtcg
     1141 acgaaatctt cgggccgcat gcccttggct ttgggattgc gcagggcggt ctcgtcgagg
     1201 atggtcttga ttcccgccag agtcggataa ggtttttccg gcagcgactt cacggcgatc
     1261 tcgcgatggg tctcttcgag ggcctcgcgg tcgtcggttt tcaaatactt gccgagaatt
     1321 ttcagcgtcg cttctttttc acgtttatag aaatgaatgc cttcagacag cacgcggatc
     1381 accgacaaca ccatgtcggg attgtttttc agatatggcc gcaatgccag catgccggtc
     1441 aattgaaagg gtatgttcaa ttcggccatg tcgatcaagg tgttcatgcc ggccttgcgc
     1501 gccgtgaggg taaacggcgg cgtgatgatg gtcgcctgga cgttcttcga taccatcgcg
     1561 gcgtagcgcg cggtctgcac gcctatctgt aacagcgtga catctttctc ggcgttcagc
     1621 cccagtcgcg ctaacgccat cttgacgctc aaatccgttg cgctgccaaa acggctgacg
     1681 gcgatcttgg cgcctctcaa ctgatcgact ttcttgatct ccggcagcga gatcaggctg
     1741 tagggaaacg tattcaacaa actggcgatg acgaggacgt cgacaccggc gagcttgctg
     1801 cccaccgatg acgaaccgtc cgataacgtc atcgcgacat cgccgcctag catggcctgg
     1861 atgcccaggg atccgccggt ggtgaagacc aaggtcggat cgaggttgtg cttcttgaac
     1921 aagccgactt ccttggcgac gatca
//
LOCUS       DATIRS010000988         2344 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1354081, whole genome shotgun sequence.
ACCESSION   DATIRS010000988 DATIRS010000000
VERSION     DATIRS010000988.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2344
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1354081"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1380)
                     /locus_tag="VLM90_12510"
     CDS             complement(<1..1380)
                     /locus_tag="VLM90_12510"
                     /inference="COORDINATES: protein motif:HMM:NF015995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease/substrate-binding
                     protein"
                     /protein_id="HSQ13840.1"
                     /translation="MTLLEFFTHNRGELGELVLEHLFLVVISTGIAVLIGVPLGILLT
                     RRPALSKPILGFANIMQTVPSLALFGFLIPLNIYLFQVKIVGGIGARTAIVALVLYSL
                     LPIIRNTFTGISNVDPAIRDAGRGMGMTDRQLLLQVELPLALGVIIAGVRVATVICVG
                     TATIAAAIDAGGLGRYIFRGLRANDNVLILAGAVPAALIAIAADLLLGYFEKTIQLGA
                     AARGKSKRLLWASALVILAVLGGVYFFNSNSGGRIAVGSKDFTEQVILGEIVAQAIEA
                     KAGLQVVRRFDLGGNLAHEALIGGEIDVYVEYTGTGLLAILKEKPLADPQEVLRRVKS
                     AYAARFKLEWTEPLGFSNTFAILVRGDDAKKLGLKTVSDAAKVSSRWRAGFGQDFMSR
                     ADGYPGFSKAYGLHFEATREMDLSLTYRALAENQVDLIAGNSTDGLISRYGLYQLADD
                     RHYFPPYDAV"
     gene            complement(1377..2144)
                     /locus_tag="VLM90_12515"
     CDS             complement(1377..2144)
                     /locus_tag="VLM90_12515"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSQ13841.1"
                     /translation="MSKNEIVIEFRDVSFVLPGGKTLLAHLNLQVGRGETLVLLGRSG
                     SGKTTTMKLINRLIDPTAGQVIIDGKPTVDWDPIQLRRRIGYVIQEIGLFPHLTIEQN
                     IGVVPRLEGWQPERIRQRAYELLNLVGLDAERFAGRMPRELSGGQRQRVGVARALAAD
                     PPVILLDEPFGALDPITRRGIQQEFKALQQNLGKTMVFVTHDIAEAFVLGSRIGLLKD
                     GEMVLLGAPAELLQSSHPEARAFAACFHDGQAIGRPA"
BASE COUNT          505 a          719 c          703 g          417 t
ORIGIN      
        1 caccgcatca tagggcggaa aataatgccg gtcatctgcc aattgataca agccgtagcg
       61 gctgatcaaa ccgtcggtgg agttgccggc gatgagatcc acttgattct ccgccagcgc
      121 gcggtaggtc agcgacaaat ccatttcacg ggtggcctcg aagtggagtc cgtaggcctt
      181 ggaaaaaccc ggatagccat cggcgcgcga catgaagtct tggccgaaac cggctcgcca
      241 ccgcgacgaa actttcgccg cgtcgctgac agtctttaag ccaagcttct tggcatcgtc
      301 gccgcggacg agaatcgcaa aggtattgct gaaccccagc ggttcggtcc actcgagttt
      361 gaagcgcgcg gcgtaggctg atttcacccg gcgcaagact tcctgcggat cggccaaggg
      421 cttttctttt aagatcgcca agagccccgt gccggtatat tcgacgtaaa cgtcgatctc
      481 gccgccgatg agcgcctcat gggcgagatt gccgcccagg tcgaaacgac gaaccacttg
      541 caggccagct ttagcctcga tcgcctgcgc gacgatctcg ccgagaatga cttgctcggt
      601 gaaatctttg gaaccgacgg cgatgcggcc gccgctattg ctgttgaaaa agtacacccc
      661 gccgagcacc gccaaaatga ccagagcgct ggcccacagc aagcgcttcg acttgccgcg
      721 cgccgccgca cccaattgaa tggttttctc gaaatagcca agcagtaaat cggcggcgat
      781 ggcgatcagc gccgccggca ccgcgccggc caggatgagc acgttgtcgt tggcgcgcaa
      841 accgcgaaag atatagcggc ccaagccgcc ggcatcgatg gccgcggcga tggtcgcggt
      901 gccgacgcag atcaccgtgg cgacgcgcac gccggcgatg atcacgccca acgccaacgg
      961 caactcgact tgcaacaaca actggcggtc ggtcatgccc atgccgcggc cggcgtcgcg
     1021 aatcgccggg tcgacattac tgataccggt aaaagtattg cggatgatcg gcaggagtga
     1081 gtagagcacc aaggcgacga tcgccgtgcg cgcgccgatg ccgccgacga ttttaacctg
     1141 aaataaataa atattcagcg ggatgagaaa accgaacagc gccagactgg gcaccgtctg
     1201 catgatattg gcgaaaccta agatcggctt gctcaacgcc ggccggcgcg tcagcaagat
     1261 gcccagcggc acgccgatca gcacggcgat accggtggag atgacgacga gaaaaaggtg
     1321 ctccaagacc agctcgccga gctcgccgcg attgtgggtg aagaattcta acagcgtcac
     1381 gccggtctcc cgattgcctg gccgtcatga aagcaggcgg caaaggcgcg cgcctccgga
     1441 tgagacgatt ggagcagctc ggcgggcgcg ccgagcaaga ccatctcgcc gtccttgagc
     1501 agcccgatgc ggctgccgag gacaaacgcc tcggcgatat cgtgggtgac gaacaccatg
     1561 gtcttgccca ggttttgctg caaggctttg aactcctgtt gaatgccgcg ccgggtgatc
     1621 ggatcgaggg cgccgaaggg ctcgtccaag agaatcaccg gcggatcggc ggcgagcgcg
     1681 cgtgccactc cgacgcgctg gcgctggccg ccggaaagct cacgcggcat gcgcccggca
     1741 aagcgctcgg cgtcgaggcc gaccagattt aacagctcat aggctcgttg ccgaattcgt
     1801 tccggctgcc aaccctccag ccgcggcacc acgccgatgt tttgttcgat agtcaggtgc
     1861 gggaacaagc cgatctcctg gatcacatag ccgatgcgcc ggcgcagttg gatcggatcc
     1921 cagtccacgg tcggcttgcc gtcgatgatt acttgtccgg cggtcgggtc gatcaagcgg
     1981 ttgatcaact tcatcgtcgt ggtcttgccc gagccgctgc gcccaagcag caccaaggtc
     2041 tcgccccggc cgacctgcaa attaagatgg gccaacaggg tcttgccgcc cggcaaaacg
     2101 aagctgacat cgcgaaactc tatgacgatt tcatttttgc tcatggtgat cgcgcccggt
     2161 cgcatctaga agacatttaa ccccgcctct tgaggcggcg acaattaaat ggggtttcca
     2221 acaggggccg gcagccccat tggacgcgag cggggttcaa acccggctcg cgaattcaat
     2281 tgatttcttt tatagtcacc cgggccatgg aacagcaaac cttaccgact attttcagcg
     2341 ccga
//
LOCUS       DATIRS010000989         1605 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_75013, whole genome shotgun sequence.
ACCESSION   DATIRS010000989 DATIRS010000000
VERSION     DATIRS010000989.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75013"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..292)
                     /locus_tag="VLM90_12520"
     CDS             complement(<1..292)
                     /locus_tag="VLM90_12520"
                     /inference="COORDINATES: protein motif:HMM:NF013205.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HSQ13842.1"
                     /translation="MKFIDEAKIYVKAGDGGNGAATFRREKYIPMGGPNGGDGGRGGS
                     IYAVADRNINTLVDYRYTRKFIGKRGENGGGADQYGAGGDDIVLRMPVGTVIY"
     gene            complement(399..662)
                     /gene="rpmA"
                     /locus_tag="VLM90_12525"
     CDS             complement(399..662)
                     /gene="rpmA"
                     /locus_tag="VLM90_12525"
                     /inference="COORDINATES: protein motif:HMM:TIGR00062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HSQ13843.1"
                     /translation="MAHKKAGGSSRNGRDSQAKRLGVKRYGGQFVLAGNIIVRQRGTE
                     FHPGENVGCGKDHTLFALKDGTVQFAVKGDKKRRTVTIVPAAE"
     gene            complement(683..994)
                     /gene="rplU"
                     /locus_tag="VLM90_12530"
     CDS             complement(683..994)
                     /gene="rplU"
                     /locus_tag="VLM90_12530"
                     /inference="COORDINATES: protein motif:HMM:NF013025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HSQ13844.1"
                     /translation="MYAVIKTGGKQYRVCAGQKLKVEQIPAEVGAEITIDQVLMVGEG
                     ESVKIGAPLVAGATVKCTVVSHGRHDKVKIFKMRRRKHYQKHQGHRQNYTELRIDTIA
                     A"
     gene            1124..1468
                     /locus_tag="VLM90_12535"
     CDS             1124..1468
                     /locus_tag="VLM90_12535"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012478.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HSQ13845.1"
                     /translation="MAEITTASGLIYEDTVVGEGAEAKAGDHVVVHYTGWLTNGSKFD
                     SSKDRNDPFDFPLGQRHVISGWDEGVQGMKIGGTRKLTIPPQLGYGARGAGGVIPPNA
                     TLVFEVELLGLR"
BASE COUNT          313 a          469 c          473 g          350 t
ORIGIN      
        1 cgtaaatcac cgtgccgacc ggcatgcgca aaacgatatc gtcgccaccg gcgccatact
       61 ggtcggcacc gccgccgttt tcaccgcgct tgccgatgaa ttttcgggta tagcggtagt
      121 caaccaaggt atttatattg cggtcggcga cggcataaat gctgccgccg cggccgccat
      181 cgccgccatt ggggccgccc atgggaatgt acttctcgcg gcggaacgtc gccgcgccgt
      241 tgccgccgtc gccggctttt acgtatatct tggcttcgtc gataaacttc atgttccgcc
      301 tctacaccca caagggatac ccccgccgaa aaatccggcg gcataaacta aaaagcccta
      361 tccggcggat agggcttttg ctgttccgcc aggccgaatt attcggcggc cggaacgatg
      421 gtcaccgtgc ggcgcttctt gtcgcccttg acggcgaact gaacggtgcc gtccttcagc
      481 gcgaacaggg tgtgatcctt gccgcagccg acgttttcgc ccgggtggaa ctcggtgccg
      541 cgctggcgaa cgatgatgtt gccggcgaga acgaattgac cgccgtagcg cttgacgcca
      601 agacgcttgg cctgtgagtc gcggccgtta cgtgaactgc cgcctgcttt cttgtgtgcc
      661 atttgttagc tccttgttga actcaggcag cgatcgtgtc gatgcgcagt tcggtgtagt
      721 tctgacgatg gccctgatgc ttctggtagt gcttgcgacg gcgcatcttg aaaatcttga
      781 ccttgtcgtg gcggccgtgg gaaaccacgg tgcacttgac ggtggcgcca gcaacaaggg
      841 gggcgccgat cttcaccgac tcgccttcgc ctaccatcag gacctggtca atagtgattt
      901 ctgcgccaac ttctgccggt atctgttcta ctttgagttt ttggccggcg caaacgcgat
      961 actgcttgcc accggttttt atgaccgcat acatgggttg gactccgaaa aataatacca
     1021 agaggtgcta caaagaaccg cgcattatac gcaaaatgat agagaagtca aagccttgtc
     1081 attgggttgt ggtagacttt tcgcctttca agaggagtac ttcatggctg aaatcaccac
     1141 ggcctccggc ctgatctacg aagacaccgt tgttggcgaa ggtgccgagg cgaaggctgg
     1201 cgaccacgtt gttgtccatt acaccggctg gctgaccaac ggcagcaagt tcgattcgag
     1261 caaggaccgc aacgatccct tcgactttcc gctcggccag cgccacgtca tttccggctg
     1321 ggacgagggc gttcaaggca tgaagatcgg cggcacgcgc aagctgacca ttccgccgca
     1381 actcggctat ggcgcgcgcg gcgctggcgg cgttattccg ccgaatgcaa cgctggtttt
     1441 cgaggttgaa ctcctcggtc tgagatgagc ggttctgaca gcgattcccg tccgaagcgg
     1501 ccgtcaaacg acgccgtatc agacgacccg tgggcaaaat ggcgcaagcc ggatgccccg
     1561 gcggctgaag tcgagccgaa aaaggagttt cggcgggatg ctgcc
//
LOCUS       DATIRS010000990         3888 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_469648, whole genome shotgun sequence.
ACCESSION   DATIRS010000990 DATIRS010000000
VERSION     DATIRS010000990.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3888)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3888)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3888
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_469648"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..555)
                     /locus_tag="VLM90_12540"
     CDS             complement(<1..555)
                     /locus_tag="VLM90_12540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13846.1"
                     /translation="MRANDNVVSLVRSQPEIDPEKSPSDMPNLSFDEASGLAEIETQA
                     NQLLDYIGKLSNLADRACVTAIRQTETAQRSEETRQTEVATLRNQLEQSTSALQERNL
                     AFTMLDNSSRDQMASMEQRLRAAERQLEERETEIASLNRQINELANRPNTTGYTTEQL
                     EQEVAEKTAELKNQLSQRDELVKSK"
     gene            1246..2328
                     /locus_tag="VLM90_12545"
     CDS             1246..2328
                     /locus_tag="VLM90_12545"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: protein motif:HMM:TIGR01208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008879 - glucose-1-phosphate
                     thymidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase"
                     /protein_id="HSQ13847.1"
                     /translation="MAGNKLKGLVLSGGRGTRLRPLTHTAAKQLVPVANRPILFHVLD
                     NLQKAAVNDVGIVISPETGQAIRDAVGDGGAWGMSVSFIEQTEPLGLAHAVKVARPYL
                     GDDAFVMYLGDNLIGSGIESFRDEFEKSAAVASILLKEVDNPSSFGIAEVDGQQRVLS
                     LVEKPKQPKSNLALVGIYFFTAKIHDAIDKIAPSWRGELEITDAIQFLLSQGGKVLSH
                     RIDAWWLDTGKKDDLLTANTVVLDEWVQRKIDGEIDGLSQVTGRVQLGKGSRVVNSTV
                     RGPVVIGDEVLVENSFVGPFTSIGNGCRIISSVLEHCLLLESARVEFVDRLEDSLLGK
                     NSAVVREQKSRQAYRLMIGDDSEVLL"
     gene            2328..2891
                     /gene="rfbC"
                     /locus_tag="VLM90_12550"
     CDS             2328..2891
                     /gene="rfbC"
                     /locus_tag="VLM90_12550"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: protein motif:HMM:TIGR01221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008830 - dTDP-4-dehydrorhamnose
                     3,5-epimerase activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HSQ13848.1"
                     /translation="MPFTFTPTSIADVIIIEPRVFPDERGFFMETYKHSEFAAQGIRE
                     IFVQGNQSRSARGILRGLHFQRQPKAQGKLVRAINGTIFDVAVDLRQGSPNRGKWVSM
                     ELSAENKKMLYAPAGFAHGFCVVSADADILYMTSDEYAPALESGIAWDDPDLQIAWPL
                     VSPQLSPRDRQWPRLRDADTGFVFHGG"
     gene            2916..>3888
                     /gene="rfbB"
                     /locus_tag="VLM90_12555"
     CDS             2916..>3888
                     /gene="rfbB"
                     /locus_tag="VLM90_12555"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: protein motif:HMM:TIGR01181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008460 - dTDP-glucose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HSQ13849.1"
                     /translation="MKTIFVTGGCGFIGSNFVRLLSAATDYRIVNFDKLTYAGNLENV
                     ADISRERMRFVQGDICDRELVERTLVEEQPWAVVNFAAESHVDRSILDSSPFLQTNIG
                     GVQSLLEAVRRVAVERFLHISTDEVYGDKEGKAPSNEDSSLAPSSPYSACKAAADLLC
                     FSYRRTYGLPILITRSSNNYGPYQFPEKLIPLLLRNGLGDLDFPVYGDGLQIRDWIHV
                     EDNCRALLAVLEKGQIGSIYNIGTSEERSNFAVVEAICGAIAAHKGVDLGQLTARIRY
                     VTDRPGHDRRYALDTAKVRNELGWTARKGVDLGQLTARIRYVTDRPGH"
BASE COUNT          764 a         1083 c         1169 g          872 t
ORIGIN      
        1 ttttgactta accagttcgt cgcgctggct cagttggttt ttgagctctg cggttttttc
       61 ggcgacctcc tgttcgagct gctcggtcgt gtagccggtg gtgttggggc ggtttgccag
      121 ttcgttgatc tggcggttta gcgatgcgat ctcggtttcg cgttcttcga gttggcgctc
      181 ggctgcgcgc aggcgctgct ccattgacgc catctggtcg cgcgagctgt tatcgagcat
      241 ggtgaaagcg agattgcgct cctgaagcgc cgaagtactt tgctccagct ggttgcgtaa
      301 cgtcgcgact tcggtctgcc gggtttcttc gctgcgttgc gcggtttcgg tttgccggat
      361 cgcggtgaca caggcgcggt ccgcgaggtt gctgagcttg ccgatatagt cgagcagctg
      421 attggcctga gtctcgattt cggccaagcc ggaggcctcg tcgaaagata aattgggcat
      481 gtcgctcggg cttttttcgg ggtcaatctc aggttggctg cgaacaagcg atacgacgtt
      541 atcattggcg cgcattgcga ggtttcctcc gccgattcta ccggacagtc tgctaaattt
      601 tcagcaattg tcgtaccatc tgcggctttt ggcggactgg ttataactgc tcgaaaaggt
      661 gggcatattt ttagcttggt ggcatcgcga tggcggttaa cgccgaaact tggccaatta
      721 cgtccatgcg tcgtaaatga gagtaatttc atcggccgaa atagcgaaaa cagtcgcgga
      781 gatattccga tgcgtcaatt gcctacctct gcggagggaa aagcagtcga gtttttaact
      841 tcgatcgcgg taccagctcc tagcgggaat tgcgccaacg agtccggcac gggcacagtg
      901 agttgctgcg cgcgctgcaa agtttgcacg attggatcga gtaaattttg accagccgag
      961 cggcggagaa ctattggcac cccaatcggc aaatccgtcc ggaattcaag aacggcctcg
     1021 cgctcatggc cgtggcgaac ggggatcggg cgcttaattt gactaacgcg gactggcttc
     1081 gggcgccgcg gtcgaagaag aaatcgcacg cgtacggcgc gcggtaagcc aacgcaaagg
     1141 gctgagttca tggtctttac cgatggaaaa aaagcttcaa tgaaggtaat ctgcgctaca
     1201 tgagatttgc accggcgctt cttcaccaag cattgaatcg agcccatggc agggaataag
     1261 ctcaaagggc tggtcctgag cggcggccgc ggcactcggc tgcgtccgct tacccacacc
     1321 gcggccaaac agctcgtgcc ggtggctaat cggccgattt tgttccacgt cctcgacaac
     1381 ctgcaaaaag ccgcggtcaa tgacgtcggc atcgtgatct cacccgagac cggccaggcg
     1441 attcgcgatg cggtgggcga cggcggcgcc tggggtatga gcgtctcgtt tatcgagcag
     1501 accgagcccc tcggcctcgc gcacgcggtg aaagtggcac ggccctacct gggcgacgac
     1561 gcctttgtta tgtatctggg cgataatctc atcggatcgg gaattgaaag ctttcgcgac
     1621 gaattcgaaa agtccgctgc ggttgcttcg atcttgctga aggaagtcga caacccgtca
     1681 agctttggta tcgccgaagt cgatggccaa cagcgcgtgc tcagtctggt ggaaaaaccg
     1741 aagcaaccga aatccaacct cgcgctagtt ggcatttatt ttttcacagc aaaaattcac
     1801 gatgccatcg acaagatcgc gccgtcctgg cgcggcgaat tggagatcac cgacgcgatc
     1861 caattcttgc tcagccaagg cggcaaggtg ttgagccatc gtatcgacgc ctggtggctt
     1921 gacaccggta agaaagacga tctgttgacc gccaataccg tcgtgctcga cgagtgggtg
     1981 cagcgcaaga tcgatggcga gatcgatggc ctgagccagg tgaccgggcg agtgcagttg
     2041 ggcaaaggca gccgcgtcgt caatagcacc gtgcgcggac cggtggtgat cggcgatgag
     2101 gtgctggttg aaaactcttt cgtcgggccg tttacttcca tcggcaatgg ctgccgcatc
     2161 atttcctccg tgcttgaaca ttgcctgctg ttggaaagcg cgcgagtgga gtttgtcgac
     2221 cgtcttgaag atagcttgct tggcaaaaac tccgccgtag tgcgcgagca gaagagccgc
     2281 caggcctatc ggttgatgat cggcgacgac tctgaagtgt tgctctgatg ccgtttactt
     2341 ttacgcccac cagcattgcc gacgtaatca tcatcgagcc gcgggtgttt cccgacgagc
     2401 gcgggttttt catggaaacc tacaagcatt cggaattcgc cgcccagggt attcgcgaaa
     2461 tattcgtgca gggcaatcag tcgcgctcgg cgcgcggcat tttgcgcggt ctgcactttc
     2521 aaaggcagcc gaaggctcaa ggcaagctcg tgcgcgccat caacggcacg atcttcgatg
     2581 tcgcggtgga cctgcgccag gggtcgccga accgcggcaa atgggtcagc atggagttga
     2641 gcgcggaaaa taaaaaaatg ctctacgcgc cggcgggatt cgcccatggt ttttgcgtcg
     2701 tcagcgccga tgcggatatc ttgtatatga ccagcgatga atacgcaccg gcacttgagt
     2761 ccggtatcgc ctgggacgat ccggatttgc aaatcgcctg gccgcttgtg tcgccgcaac
     2821 tttcgccgcg cgatcgccag tggccgcggt tgcgcgacgc cgacactggc tttgtctttc
     2881 acggtggctg accgcggcgc gtttcggcag aaatgatgaa aactatcttt gtcaccggcg
     2941 gctgcggttt tatcggcagt aacttcgttc gtctgctgtc ggccgctacg gattaccgca
     3001 ttgtcaattt cgacaagctg acctacgccg gcaatttgga aaatgtcgcc gatattagcc
     3061 gggaacgcat gcgtttcgtc cagggcgata tttgcgaccg cgaactggtc gagcgcacgc
     3121 ttgttgaaga acagccctgg gcggtggtca acttcgccgc cgagtcccat gtggatcgca
     3181 gcatcctcga ctcgtcgccg tttctccaga ccaatatcgg cggcgtgcag tctttgctcg
     3241 aagctgtgcg gcgggtggcg gtggagcgtt tcctgcacat ttccaccgac gaagtttatg
     3301 gcgacaagga aggcaaggcg ccgtccaacg aagattcttc cttggcccca agcagtccct
     3361 attcggcgtg caaagccgcc gccgatctgc tctgtttctc ctatcgccgt acctacggat
     3421 tgccgattct gatcacgcgc agctcgaaca attacggacc gtatcagttt cctgaaaagc
     3481 tcatcccgtt gctcttgcgc aacggtctcg gcgatctcga ctttccagtc tatggcgacg
     3541 gcttgcagat ccgcgattgg attcatgtcg aggataactg ccgggcgttg ttggcggtct
     3601 tggagaaagg ccaaatcggt tcgatttata atatcggcac cagcgaagag cgcagcaatt
     3661 tcgccgtggt cgaagcgatc tgcggcgcca tcgcggcgca caagggcgtc gacctgggcc
     3721 aactcacggc gcgcatccgc tacgtcaccg accgtcccgg ccacgaccgg cgctacgccc
     3781 tcgatactgc caaggtccgt aatgaactgg gctggaccgc gcgcaagggc gtcgacctgg
     3841 gccaactcac ggcacgcatc cgctacgtca ccgaccgtcc cggccacg
//
LOCUS       DATIRS010000991         1848 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_665909, whole genome shotgun sequence.
ACCESSION   DATIRS010000991 DATIRS010000000
VERSION     DATIRS010000991.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1848)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1848)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1848
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_665909"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..323
                     /locus_tag="VLM90_12560"
     CDS             <1..323
                     /locus_tag="VLM90_12560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13850.1"
                     /translation="GELVRLMHKKLAAAWLKKFEACLQASAKSGELHDVPFRKDICVW
                     FVQHVAFSLMLHLRPKVPAINYKVSREELVSQATWFALLGIGLKEDAARRYYSPKALQ
                     LLAS"
     gene            381..812
                     /locus_tag="VLM90_12565"
     CDS             381..812
                     /locus_tag="VLM90_12565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13851.1"
                     /translation="MEFKAPSNNEGGKKTAGLDERIGSLFQPDTLIGEDYAANFRRKI
                     PLEAERTLLLAILEDGIRSFQENLFATSGKRRTIFDEANEWIFSDDDTWFCSFVSVCN
                     LLSLEPQYIRRGLRQWEGKMDKNAGQKKAQLVVRDEQRLVA"
     gene            853..>1848
                     /locus_tag="VLM90_12570"
     CDS             853..>1848
                     /locus_tag="VLM90_12570"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HSQ13852.1"
                     /translation="MQSSWVFALVGAGLFLACGKKSETAFERPPAPVAVVQAVSQDVP
                     VYIDAVGKISAREVVSIQPQVSGRITQIHFVDGADVGVGQLLFTVDPRPYQAQLNQAE
                     ANLAQAEAALSLAKINFARVENVSDPRAVSRQDYDTKKSAVESADALVKQNRAAVENG
                     RLNLEYCTIRSPINGRAGQRAVDIGNVVAANNGSLLVIQRLDPVYADFTVTESDLTAV
                     QRNMAKRSLRVEVRLPDENGGPREGKLTFLDNAVQEGTGTVKLRATLPNSDRRFWPGR
                     FAQIRLILDTRADAVLVPAEAPQLSAKGSFVYVIKNDSSAELRAVKLGQRQGELVV"
BASE COUNT          385 a          483 c          581 g          399 t
ORIGIN      
        1 acggcgagtt ggtgcggttg atgcacaaga agctcgccgc ggcgtggttg aagaagttcg
       61 aggcttgctt gcaggcttcg gcgaaatcgg gcgaattgca cgacgtgcca tttcgcaaag
      121 atatttgcgt ttggtttgtc caacatgtgg ctttctcttt gatgctgcac ctgcggccca
      181 aagtgccggc gatcaattat aaggtttcac gcgaagagct ggtgtcccaa gcgacctggt
      241 tcgcgctctt ggggatcggc ctcaaagagg atgcggcgcg ccgttattac agtccgaaag
      301 ctctacaatt attggcgagc taatggggtt attggggccg gtttaaagat ccagtttatt
      361 tatttaaagg gggatgggtt atggagttca aggcacctag caataatgaa ggcggcaaga
      421 agaccgccgg tttagatgag cgcattggct cgctgtttca gcccgatacg ttgatcggcg
      481 aagactatgc ggccaatttt cgccgtaaga tcccgctgga ggcggagcgc acgctcctgc
      541 tggcgatctt ggaagatggc atccgttcgt ttcaagaaaa tctctttgcc accagcggca
      601 agcgccggac gattttcgac gaggccaacg agtggatttt tagcgatgac gacacctggt
      661 tctgctcctt cgtgtcggtc tgcaacttgc tcagcctgga gccccagtac atccgccggg
      721 gcctgcgcca gtgggaaggt aagatggaca agaacgcggg gcaaaagaaa gcgcaactcg
      781 tggttagaga cgagcagcgc ctggtggcgt agccagagaa gcggcttgag cagaatctgc
      841 cggcgccgga ggatgcaaag ctcctgggta tttgcactag tcggcgccgg cttgtttttg
      901 gcctgcggca agaaaagtga gaccgctttc gagcggcccc ctgcgccggt ggcggtggtt
      961 caggcggtca gccaagatgt gccggtgtac atcgatgctg tcggtaagat atctgcccgc
     1021 gaagttgttt ccatccagcc gcaagtttca gggcggatca cgcaaatcca tttcgttgac
     1081 ggcgccgacg tcggggtcgg tcaactgctg ttcaccgtcg acccccggcc gtatcaggcc
     1141 caattgaatc aagccgaggc caatctagcg caagcggaag cggcgctcag cctggctaaa
     1201 attaacttcg cccgggtgga gaatgtcagt gatccgcgcg ccgtgtcgcg ccaagactac
     1261 gataccaaga aaagcgcggt ggagagcgcc gacgcgctgg tcaaacaaaa ccgcgcggca
     1321 gtggaaaatg gccggctcaa tctcgagtac tgcacgattc gttcgccgat caatggccgg
     1381 gctggacagc gcgccgtcga tatcggcaac gtggtcgcgg ccaacaacgg ttcgctgctg
     1441 gtgattcagc gcttggatcc ggtttacgct gattttaccg tgacggaaag tgatttgacg
     1501 gcggtgcagc gcaacatggc caagcgcagt ttgcgcgtgg aagtccgctt gccggatgag
     1561 aatggtggtc ctcgtgaggg caagctcact tttctcgata acgctgtcca agagggcacc
     1621 ggcacggtaa aactgcgcgc caccctgcct aactcggacc gccgtttttg gcccggccga
     1681 ttcgcgcaaa ttcgtttaat cctcgacacc cgcgcggatg cggttttggt gccggccgag
     1741 gcgccacagt tatccgccaa gggttcgttt gtctatgtga ttaaaaatga ctcgtcggct
     1801 gaactgcggg cggtgaagct cggccaacgt cagggtgaat tggtagtc
//
LOCUS       DATIRS010000992         1752 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1059681, whole genome shotgun sequence.
ACCESSION   DATIRS010000992 DATIRS010000000
VERSION     DATIRS010000992.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1059681"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            257..1516
                     /locus_tag="VLM90_12575"
     CDS             257..1516
                     /locus_tag="VLM90_12575"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ13853.1"
                     /translation="MSEAITSSAAALKRYGLVALAFLHIAVGRGLHGTFGVFFVAMLD
                     AFGWSRATTAGAISLAIIFEGACLPYAGGLIDRIGGRKTLILGGVVLLAGLGFASTIS
                     SIWQLYFWIGIVSAAGIALIGMVPHVAIITRAFPERKGTALGIAWAGGGVGIVLLVPA
                     TQLMIDRWGWSPAYLGLAAMTALLVIPPVLFFLPRDAKAGGPQVAAAKSAADKSSDHD
                     WTVKQALTNSAFWLLFIARTLASLGNQVIVTHQIAHAVDVGYSKVFAASIFGFMGVVS
                     IGGRILFGYLADVMNRQMVFTVVQIISAFGIFALLELSDSSTPWLLYSYAVCYGLGQG
                     SRALVLSAISADIFHGRHFGAIFGYFTFSIGLGGAIGAWLGGYLFDITHSYAVPFWVS
                     LACLIASVFIVWASARAVDAQNLEERK"
     gene            1520..>1752
                     /locus_tag="VLM90_12580"
     CDS             1520..>1752
                     /locus_tag="VLM90_12580"
                     /inference="COORDINATES: protein motif:HMM:NF014816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HSQ13854.1"
                     /translation="MIQLYTWGTPNGKKASIMLEEVGLPYEVHPINIGQNDQFKAEYL
                     AINPNNKIPAIIDADGPGGKPFTLFESGAILMYL"
BASE COUNT          323 a          497 c          501 g          431 t
ORIGIN      
        1 catggcgacg aagaacacgc cgaaagtacc atgcaagccg cgccccactg cgatgtgcaa
       61 aaaggccaag gcgactaaac cgtagcgttt aagcgcggca gaagaagaag tgatcgcttc
      121 gctcgaaatg acagcaaatg agtcgatttg tcatctcgaa cgacgtgaga gatctcggtc
      181 tgactgaacc gctacatact caacctttaa atagactttc cggcgcactt gggttattcc
      241 atacggtttc ttaatcatga gcgaagcaat cacttcttct gctgccgcgc ttaaacggta
      301 cggcttagtc gccttggcct ttttgcacat cgcagtgggg cgcggcttgc acggtacttt
      361 cggcgtgttt ttcgtcgcca tgctcgacgc cttcgggtgg tcccgggcga cgacggcggg
      421 ggcgatttcg ttggcgatta ttttcgaagg cgcttgtttg ccctacgccg gcggattgat
      481 cgatcgcatc ggcggccgca aaacattgat cctcggcggc gtcgtgcttc tggccggtct
      541 cggattcgct tcgacgatct cgtcaatctg gcagctgtat ttttggatcg gcatcgtcag
      601 tgccgcgggc atcgcgctga tcggcatggt gccccatgtg gcgatcatca cgcgggcgtt
      661 tcccgaacgc aagggaaccg ccctcggtat cgcctgggcc ggcggcgggg taggcatcgt
      721 gctgctggtg ccggccaccc agttgatgat cgatcgctgg ggctggtcac cggcctacct
      781 cggtctcgcg gcgatgactg cgttgctggt gattccgccg gtgctgtttt tcctgccgcg
      841 cgacgccaag gctggcggcc cccaagttgc cgcggcaaaa tccgctgcgg ataaatcttc
      901 cgaccacgac tggacggtca agcaggcgct aaccaattcg gcattttggc ttctattcat
      961 cgcccggacg ctggcgagtc tgggcaatca agtcattgtc acgcaccaaa tcgcccacgc
     1021 tgtcgatgtt ggctacagca aagtcttcgc ggcgtcgatt ttcggtttca tgggagtcgt
     1081 cagcattggc gggcgcattc tcttcggtta tcttgccgac gtcatgaatc gccaaatggt
     1141 ctttaccgtg gtacagatta tttccgcctt tggcatcttc gcgctgcttg agttgtccga
     1201 ttcgtcgacg ccctggctgc tttacagcta tgcggtttgc tacggtctgg gacaagggtc
     1261 gcgcgccttg gtcctgtcgg cgatctccgc cgatattttt cacggtcgac attttggcgc
     1321 gatcttcggc tatttcacct ttagcattgg ccttggcggc gccatcggcg cctggctcgg
     1381 cggctatctt ttcgacatca cccatagcta cgcggttccg ttctgggtat cgcttgcctg
     1441 tctcattgca tccgtgttta tcgtttgggc cagcgcccgc gcggtcgacg cgcaaaatct
     1501 tgaggaaagg aagtaaacta tgattcaact ctatacttgg ggcactccca acgggaagaa
     1561 ggcttccatc atgctggagg aggtagggct tccctacgaa gtgcatccga tcaatatcgg
     1621 acagaacgac cagttcaagg cggaatatct ggcgatcaat ccaaacaata agatccccgc
     1681 gatcatcgat gctgacggac cgggaggcaa gccgttcacg cttttcgaat ccggcgcgat
     1741 cttgatgtat ct
//
LOCUS       DATIRS010000993         3557 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_173355, whole genome shotgun sequence.
ACCESSION   DATIRS010000993 DATIRS010000000
VERSION     DATIRS010000993.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3557)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3557)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3557
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173355"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(19..2097)
                     /gene="pheT"
                     /locus_tag="VLM90_12585"
     CDS             complement(19..2097)
                     /gene="pheT"
                     /locus_tag="VLM90_12585"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR00472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HSQ13855.1"
                     /translation="MKFTLNWLKEFVDFGGTAAELSKLLTSAGLEVESLTPLKEPESQ
                     REDWLFEIAVTPNRGDCLGLLGIAREVCALTGAQAKFPPVQRSKKDPRIHKRVALKIE
                     DAGQCARYSARIVDEVKIASSTPLIRFRLESCGIRAINNVVDATNYVMLETGQPLHAF
                     DLARLAAKQIIVRNARETRKFTTLDGVERELAHEDLLICDGDTPVALAGVMGGMNSEV
                     SAATTSLLLESANFAPATIRRTAKRLALHSEASHRFERGVDPEGTLRALDRAVQLISE
                     NGGCRPLAGAADCYPEKVKPVTIRLRKQRISRILGVAIEFRQAEKLLRSLGLKTTRQG
                     QQLNAVIPTSRPDLTREIDLIEELARLHGYDHIPTTLPLLRPTGGALDFRLAGERKLG
                     NFFAGEGFVEAINLPFTSDALNGLFCGLWQGAQTAVPLLNPLSKESSAMRQSLLPGLL
                     DNLRVNLAQKTASCHVYHLGKVFRCDPTGGYEERLCVGGLMHGARALRGLRRKDHSTL
                     DFLQCKGAVEGLLDLFGLRDSISWTVAASDILHPGRAAQLHHQDCRIGFLGELHPEVA
                     EQLEVPQVYVFELDFEKLLEYAPRQMTVRALAKFPAIERDFAIVVERDFAAHRIIDWI
                     GHLGESLIEHVQAFDQYIGAPIPDGKKSLAYNISYRAEDRTLTDSEVNPLHQSVVDRI
                     GKEFGAERRS"
     gene            complement(2188..3228)
                     /gene="pheS"
                     /locus_tag="VLM90_12590"
     CDS             complement(2188..3228)
                     /gene="pheS"
                     /locus_tag="VLM90_12590"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR00468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HSQ13856.1"
                     /translation="MTDSLEALRGEVLERIQQAHSVKELEQLRIEALGRSGSITLLLR
                     GLKDLPTEERPRMGERLNQLRRALEQELEARLADVNRQAKSTALAEEKIDITLPGARL
                     ERGHSHPLTLVIDEIIEIFFGMGFEIARGPDIEDDYHNFEALNIPKDHPARDMQDTFF
                     VAGGNLLRTHTSPVQIRTMESRKPPLQIIVPGAVYRHDDDATHSPMFHQVEGFMVDNN
                     ISFADLKGVLTHVLRQIFTRDAGVRFRPSFFPFTEPSAEIDIQCVICGGGGTLRNGQI
                     CRVCKASGWLEILGAGMIDPAVFKFVGYDPEEFTGFAFGMGVERIAMLKYGIDDIRLF
                     FHNDLRFLRQFN"
     gene            complement(3250..>3557)
                     /gene="rplT"
                     /locus_tag="VLM90_12595"
     CDS             complement(3250..>3557)
                     /gene="rplT"
                     /locus_tag="VLM90_12595"
                     /inference="COORDINATES: protein motif:HMM:TIGR01032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HSQ13857.1"
                     /translation="KLAKGYVGGRGRLYRSAVETVERGLVFAYRDRRVKNRTFRGLWI
                     IRIGAAAKLNGMSYNQVINGLKKANVEIDRKILAEIAVADMPGFGRLVETAKAHLSQ"
BASE COUNT          751 a         1027 c         1028 g          751 t
ORIGIN      
        1 atccgcggct ccgcactgct agctacgccg ttcggcgccg aattccttgc cgatccggtc
       61 gacgacactt tggtgcaatg gattgacctc gctgtcggtg agggttcggt cctcggcgcg
      121 ataggaaata ttgtacgcca aactcttctt gccgtccggg atcggtgcgc cgatatactg
      181 atcgaacgct tgaacatgtt cgattaagga ctcaccgaga tgcccgatcc aatcgatgat
      241 tcgatgcgcc gcgaaatcgc gctccacgac gatggcaaag tcccgttcga tggctggaaa
      301 ttttgccagc gcgcgaactg tcatttgccg cggagcatac tcaagcaatt tctcgaagtc
      361 aagttcaaat acataaactt gcggcacttc cagctgctca gcgacttcgg ggtggagctc
      421 gccgagaaag cctatgcggc aatcctgatg gtgcagttga gccgcgcggc ctgggtgcaa
      481 tatgtcagat gccgcgacgg tccaggatat tgaatcgcgc agcccgaaca ggtcaagcag
      541 tccttccacc gctcctttgc actggagaaa atctagcgtc gaatggtcct tgcggcgcag
      601 accccgaaga gcccgcgccc catgcatgag gccgccgaca cacaggcgtt cttcataccc
      661 gccggtcgga tcgcagcgga aaaccttgcc cagatggtaa acatgacagc tcgccgtctt
      721 ttgcgccaaa ttgactcgta aattatcgag cagccccggt agcaggctct ggcgcatggc
      781 gctactctct ttggacagcg gattgagcaa cggcaccgcg gtttgggccc cctgccataa
      841 accgcagaac aaaccattga gggcgtcgga ggtaaatggc aagttgatcg cctcgacgaa
      901 accctcgccg gcgaaaaaat tgcccagctt gcgttcgccg gcgaggcgaa aatccagcgc
      961 accaccggtg ggccggagca gcggcagcgt ggttggaata tggtcataac catgcagacg
     1021 cgccaactct tcaatcagat cgatctcgcg cgtcaagtct ggccggctgg tcggaatcac
     1081 ggcattgagc tgctgacctt gccgggtggt tttgagaccg agggagcgga gcaacttctc
     1141 agcttgccgg aactcaatgg ccacgcccaa tattctcgat atgcgttgtt tgcgcaggcg
     1201 aatcgtcacc ggcttgactt tttccgggta acaatcggcg gcgcccgcca gcggacgaca
     1261 tccgccattt tcactgatca actgcaccgc gcgatccagt gcccgaaggg ttccttcggg
     1321 atcgacgccg cgttcaaaac ggtgtgaggc ctcgctatgc aaagccaagc gctttgccgt
     1381 gcgccgaatt gtcgctggcg cgaagttagc gctctcgagt aagagcgatg ttgtggctgc
     1441 gcttacttcg gaattcatgc cgcccatcac gccggcgagc gccactggag tatcgccgtc
     1501 gcagatcagc aaatcttcat gggcgagctc gcgctcgaca ccgtcaaggg tcgtgaactt
     1561 gcgggtctca cgggcgttgc gcacgatgat ttgcttggca gcgagccgcg ccaggtcaaa
     1621 ggcgtgcagc ggctggccag tttccagcat gacataattg gtggcatcga cgacgttgtt
     1681 gatggcgcgg atgccgcagg attcgaggcg gaaacgtatc aaaggagtcg aggaggctat
     1741 tttgacctcg tcgacgatgc gcgccgagta gcgcgcgcat tggccggcat cttcgatctt
     1801 aagcgccacg cgcttatgaa tgcgcggatc tttcttgctc ctctgaaccg ggggaaattt
     1861 cgcctgcgcc ccggtgagcg cacaaacttc acgggcgatt cccagcaggc ctaaacaatc
     1921 gccgcggttg ggcgtcacag cgatttcaaa taaccagtcc tcacgttgac tctcgggctc
     1981 tttgagcggc gttaacgact cgacttccaa tcccgcgctg gtgagcaatt tggagagttc
     2041 agcggcggtg ccaccgaagt cgacgaattc cttgagccag ttgagggtaa atttcataag
     2101 attggattac tggagtgtgg gaatattgga gtgatgggtt tcggcaacaa cactccatca
     2161 ctccagtact ccatcattcc attccgttta gttgaactgg cgcaaaaatc gcaagtcatt
     2221 gtgaaagaac agccggatgt cgtcgatgcc atacttcagc atggcgatgc gctcgacgcc
     2281 catgccaaag gcgaacccgg taaactcttc gggatcgtaa ccgacgaatt tgaataccgc
     2341 cggatcgatc atgccggcgc ccaagatttc caaccagccg ctggctttac agacgcggca
     2401 tatctggccg ttgcgcagcg tgccgccgcc gccgcaaatg acgcattgga tatcgatctc
     2461 ggcgctgggc tcggtgaatg gaaaaaaact cggccggaaa cgcactccag catcacgggt
     2521 gaaaatctgc cgcagcacat gggtcaacac gcccttcaga tcggcgaagg agatattgtt
     2581 atcgaccata aagccttcga cttgatgaaa catcggcgaa tgggtggcat cgtcatcgtg
     2641 gcggtaaacc gcgccgggca cgatgatttg cagcggcggc ttgcgacttt ccatcgtgcg
     2701 aatctgcacc ggcgaggtgt gagttctcaa taagttgccg ccggcgacaa aaaaagtatc
     2761 ctgcatgtcg cgcgccggat ggtccttggg aatattgagc gcttcgaagt tgtggtaatc
     2821 gtcctcgata tcgggaccgc gggcgatctc gaaacccatg ccaaaaaaaa tctcgatgat
     2881 ctcgtcgatc accagcgtta gcgggtggct atggccacgc tctagccgcg ctcccggcag
     2941 ggtgatatcg attttttctt cggcgagggc cgtggacttg gcttgccggt tgacgtcagc
     3001 caatcgggct tcgagctctt gctccagagc gcggcgcagt tgattgagcc gttcacccat
     3061 gcgcggccgt tcttcggtcg gcaggtcttt cagaccgcgc aacagcagcg tgatcgagcc
     3121 gctgcggccc aatgcttcga tgcgcagctg ttcgagctcc ttgacggagt gggcttgctg
     3181 gatgcgctcc agaacctctc cacggagagc ttccagggaa tcggtcatgg gactgaactg
     3241 aaagagcagt tactggctca gatgagcttt agcggtttcc accaagcggc cgaatcccgg
     3301 catatcggcc accgcgatct ccgcaagaat tttgcggtcg atctcgacat tggccttctt
     3361 cagcccatta atcacttgat tataggacat accgtttagc ttggccgcgg cgccgatgcg
     3421 gatgatccac aggccgcgaa atgtccgatt tttgacgcgc cggtcacggt acgcaaatac
     3481 cagcccgcgt tcgacggtct ccaccgcgga gcggtacaga cgaccgcggc cgccgacgta
     3541 ccccttggct agcttca
//
LOCUS       DATIRS010000994         3738 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_371042, whole genome shotgun sequence.
ACCESSION   DATIRS010000994 DATIRS010000000
VERSION     DATIRS010000994.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3738
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_371042"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1217
                     /locus_tag="VLM90_12600"
     CDS             <1..1217
                     /locus_tag="VLM90_12600"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ13858.1"
                     /translation="LPTDKTKLETLRLAARKVRSAEPIAPKEVSSSPLFENKLTGSDV
                     NLLKFPALRFHENDGGRYFGPGGGLINRDPDSGYVNSGTYRMQLHDKHTLGLWMSPGQ
                     NGRQICAKYWDKGKSCPVVASYGQHPMVFMPSYTKFPYGRSEMEISGGLMGRPLEVLR
                     GPITGLPIPASSEIAIEGEIPPPSEEARAEGPFGEWPGYYSGGTTGTGENQPIIRIKA
                     IYHRNDPILEDEAPLWPGAVKMDLHISAGVLWDQLESAGIQDIAGVYNHTSYMTVVSI
                     RQKYPGHAKQAGQAALSCAAANRNGRYVVVVDEDIDPTNMKEVLWAMMTRVDPPTNID
                     IIDGCWSTPLDPRMPPEKRDSKDHTNGRAIFYAVRPYHWKDKFPKVSRSSRELREKTI
                     AKFKGVIPFPGS"
     gene            1314..2594
                     /locus_tag="VLM90_12605"
     CDS             1314..2594
                     /locus_tag="VLM90_12605"
                     /inference="COORDINATES: protein motif:HMM:NF039910.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSQ13859.1"
                     /translation="MISREENQLLTQTNAGTPCGELLRRYWQPVALSEELKPDGAPLP
                     VTLLGEELVIFRDDKGRVGVLEAHCCHRGADLTYGRLEDGGLRCIYHGWLYDVNGKIL
                     EQPGEPNGGEHRDDFCQPSFPCREIGGVILAYIGPGEPPLLPNYEFLQVPDDQRFVSK
                     IHHSCNYLQSNEGNIDPVHLSFLHRNLELSDTDKKRRVPGSENSPNSLFGADIAPRIE
                     VELTDFGVRIFSIRNIDDEKIYFRTSNFIMPNFSTFPGQTAAEGYSVNWHVPIDDHNH
                     WKFVIVFSRKRALDRSMMLRGRDELQPDYRMTRTKGNRYLQDRASMKAKSFSGIGYNF
                     QAQDACVIEGAGTIQDRTKEHLVTSDKAIVAARKLLLKGIQDVKEGRDPLHVVRDPRK
                     NDFAHLAVISEVAPKTADIRSIVQQKIAEQNLSA"
     gene            2721..>3738
                     /locus_tag="VLM90_12610"
     CDS             2721..>3738
                     /locus_tag="VLM90_12610"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HSQ13860.1"
                     /translation="MSEILRLGMAGLGVASTQIMPPIAKLPFIKITAAADMRADAVAK
                     FREQYKAEGYTSVEELCASPNVDAVYIATPNSLHAEHAIIAAKHKKHIIVEKPMAMNL
                     AECDAMNEAADKYGVKLLCGHTHSFDPPIRKIREIVKSGELGKLCMINTWNYNEFMYR
                     PRMKHELAMTRGVVLNQGPHHVDVVRLIGGGMVRSVRAMTGIWDPAREWEGSYTCYLE
                     FADGTPATLVYSGYGFFDTAELFDWVGEGGQHRPPDTNLNVREKLREVRTAEEEEQLK
                     EGMRFGGKREGEYSHVWSGVRKQPFFGHTVVSCQKGDIRQTPDGLRIYGETERREIKL
                     PPGSR"
BASE COUNT          834 a         1049 c         1148 g          707 t
ORIGIN      
        1 gattgcccac cgacaagact aaattagaaa ccttgcgtct ggcggcgcgc aaggtgcgca
       61 gtgccgagcc gattgcgccg aaggaagtaa gcagctcgcc gctgttcgaa aataaattga
      121 ccggcagcga cgttaactta ctcaagtttc ccgcgctgcg atttcacgag aacgacggcg
      181 ggcgctactt tgggcccggc ggcggattga tcaatcgcga tcccgacagc ggctacgtca
      241 acagcggcac ctaccgcatg cagctgcatg acaagcacac gctggggctc tggatgagcc
      301 ccggccagaa tggccggcag atttgcgcca agtattggga taagggcaag agctgcccgg
      361 tggtggcgag ttacggccag catcccatgg tgttcatgcc gtcttacacg aagtttccct
      421 acggccgctc ggagatggaa atatccggcg gcttgatggg ccggccgttg gaagttttgc
      481 gcgggccgat taccggcttg ccaataccgg cgtcctcgga gatcgccatt gaaggcgaga
      541 ttccgccgcc gtcggaagag gcgcgggccg aagggccgtt cggcgagtgg ccgggttact
      601 attccggcgg caccactggc accggcgaga accaaccgat cattcgcatc aaagcgatct
      661 atcaccgcaa cgatccgatt ctcgaagatg aggcgccgct gtggccgggg gcggtgaaga
      721 tggatctgca tatctccgcc ggcgtgctgt gggaccaatt ggagagtgcg ggtattcaag
      781 acatcgccgg cgtctacaat cacacttcct atatgaccgt ggtttcgatt cggcaaaaat
      841 accccggcca cgccaagcag gcggggcaag cggcgctcag ctgcgcggcg gccaatcgta
      901 atggccgtta cgtggtggtg gtcgatgagg atatcgaccc gaccaatatg aaagaagtgc
      961 tgtgggcgat gatgacgcgg gtcgatccgc cgaccaatat tgacatcatc gacggctgct
     1021 ggagcacgcc cctcgatccg cgcatgccgc cggaaaagcg cgatagcaag gatcacacaa
     1081 acggccgggc gatcttctac gccgtgcggc cctatcactg gaaagataaa ttcccgaagg
     1141 tcagccggtc gagccgcgag ctgcgcgaga agacgattgc caagttcaaa ggagtgatcc
     1201 cgtttcctgg gtcgtgaggg tgagcggccg gtcgccgctg cagaaaaccc tcaccctagc
     1261 cctcccgcaa gcgggcgagg ggacgaagat attaaagcga gggaatttac caaatgatca
     1321 gtcgggagga aaaccaacta ctaacccaaa ccaacgccgg caccccgtgc ggcgagctct
     1381 tgcgccgcta ttggcagccg gtggcgttgt cggaagagtt gaaaccggac ggcgcaccgt
     1441 tgccggtgac gttgctgggc gaagagttgg tgattttccg cgacgacaaa gggcgtgtcg
     1501 gcgtgctcga agcgcattgt tgccatcgcg gcgccgatct aacttatggc cggttggaag
     1561 atggcgggct gcgctgcatt tatcatggct ggctttatga cgtgaacggc aagattctcg
     1621 aacagccggg ggagcccaac ggcggcgagc accgcgatga cttttgccag ccttcctttc
     1681 cttgccgcga gatcggcggc gtcattctag cctatatcgg tcccggcgag ccgccgctgt
     1741 tgcccaacta cgaatttctt caagttcccg acgaccagcg ctttgtctcg aagattcatc
     1801 actcgtgcaa ttatcttcag tccaacgagg gcaatatcga tccggtgcat ctgtctttcc
     1861 tgcatcgcaa tctcgaactt tccgacaccg acaagaaacg gcgcgtgccg ggcagcgaga
     1921 attcgcccaa ttcgctgttc ggcgccgata tcgcgccgcg catcgaagtc gagctgaccg
     1981 attttggcgt gcggattttt tccattcgca acatcgacga cgaaaagatt tattttcgca
     2041 cgtcgaattt catcatgccc aacttcagca ccttccccgg ccagaccgcg gcggagggtt
     2101 actcggtcaa ctggcatgtg ccgatcgacg atcacaatca ctggaaattc gtcatagttt
     2161 tcagccgcaa gcgcgcgctc gaccggtcga tgatgctgcg cgggcgcgac gagttgcagc
     2221 ccgactatcg tatgacccgc accaagggga accgctactt gcaagaccgc gcgtcaatga
     2281 aagctaaatc cttcagcggc atcggctaca acttccaggc gcaggacgcc tgcgttattg
     2341 agggagccgg gacgatccaa gaccggacca aggagcatct ggtgacctcg gacaaggcga
     2401 ttgtcgccgc gcgcaagctg ctgctcaagg gcattcaaga cgtgaaggaa gggcgcgatc
     2461 cgctgcatgt ggtgcgcgat ccgcgtaaga atgactttgc gcacctcgcg gtcatttcag
     2521 aggtcgctcc aaagaccgcg gatattcggt ccatcgtgca acaaaaaatt gccgagcaaa
     2581 atttgtccgc gtagtgagtt taactctcgt cctttgagag agggaagggt gagggccatc
     2641 gcattcgtac aaaatgcgct ctcacctcag tcttcgcgga gggcgagggt gtaagaaagc
     2701 ctgcgccgaa ggaaatatca atgagtgaga ttcttcgatt aggcatggcc ggcttgggcg
     2761 tggcgagcac gcagatcatg ccgcccatcg ccaagttgcc gttcatcaaa atcaccgccg
     2821 ccgcggatat gcgcgcggac gcggtggcga agttccgcga gcagtacaag gccgaaggtt
     2881 acaccagcgt cgaggagtta tgcgccagcc ccaacgtcga cgcggtctat atcgccacac
     2941 ccaattcgct gcacgcggag catgcgatta tcgccgccaa gcacaagaag catatcatcg
     3001 tcgaaaaacc catggcgatg aatctagcgg aatgcgacgc catgaatgaa gcggcggaca
     3061 agtacggcgt taaactgctg tgcggccaca cccatagctt cgatccgccg atccgcaaga
     3121 ttcgcgagat cgtcaaaagc ggcgagctcg gcaagctgtg catgatcaat acctggaact
     3181 acaacgaatt catgtaccgg ccgcggatga agcatgagct ggccatgacc cgcggcgtgg
     3241 tgctcaatca aggaccgcac catgtcgacg tggtgcgctt gatcggcggc ggcatggtgc
     3301 gcagcgtgcg cgccatgacc ggtatttggg acccggcgcg cgagtgggaa ggcagctata
     3361 cttgttattt agaattcgca gacggcacgc cggcgacgct ggtttatagc ggttatggct
     3421 ttttcgatac cgcggaattg ttcgattggg tcggcgaggg cgggcaacat cggccgcccg
     3481 ataccaattt gaatgtgcga gaaaaattac gcgaggtgcg cacggcggaa gaagaagagc
     3541 agttaaaaga aggcatgcgc tttggcggca agcgtgaggg cgaatacagc catgtctgga
     3601 gcggcgtgcg caagcagccg tttttcggcc acaccgtggt aagctgccag aagggcgata
     3661 ttcgccagac gccggatggt ttgaggatct acggtgaaac cgagcggcgg gaaatcaaat
     3721 tgccgccggg cagccgcg
//
LOCUS       DATIRS010000995         1971 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_173511, whole genome shotgun sequence.
ACCESSION   DATIRS010000995 DATIRS010000000
VERSION     DATIRS010000995.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1971)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1971)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1971
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173511"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..244
                     /locus_tag="VLM90_12615"
     CDS             <1..244
                     /locus_tag="VLM90_12615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13861.1"
                     /translation="HIPATRALSRVELAQYLMSRFGLTANFLYESRHERSAPHLGHVE
                     LASVYHGALFRPLPSIIDDGPAKMLEVRSVINTPSF"
     gene            441..881
                     /locus_tag="VLM90_12620"
     CDS             441..881
                     /locus_tag="VLM90_12620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13862.1"
                     /translation="MRECMFGGQWGAFDSTGAHFFKPSHPIYKSIAQIAAIRRDEPAL
                     RNGRQYFREVSGNGIDFGYPIDGKCTLAYSRILDDSEILIALNLDAAPRADYITVDAH
                     LSAAGTQLQNLLDPRAQFEVEAQGPRHAVKIPLAGHGMAILRQE"
     gene            complement(916..>1971)
                     /locus_tag="VLM90_12625"
     CDS             complement(916..>1971)
                     /locus_tag="VLM90_12625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13863.1"
                     /translation="ILICDRCVLSQKAQRRRETKASRKDYLMADKPKITLGLPDHPRC
                     RALIDGKIGIDGYDLEICHDFVSSGERHYRFLQGEWDVGECSMATLLRAFEKKRPFRA
                     IPVFFERGPRQRNIFYCEGRLKHPSDLKGKKFGSFRYGATAAVWARGYLLDAYNIKTT
                     DMQWFVSGREVYIGNELPVKVERIDPPPPFGEEKLQLSKLLSEGVLHGAIVPGDFGYL
                     GLFGGGTTAPMMAKYPGVKQLFDDTDEIIRYTKQTGINPIIHVITLSQAVVDKHPDLP
                     AKLTRAFKAARDAAAPYMDADEIAGNAKERDVIGEDPYAYRIGVNEKRALAALNRYQI
                     EQGLLKTMLPMDELFIG"
BASE COUNT          403 a          559 c          562 g          447 t
ORIGIN      
        1 acatattccg gcgacgcgcg cgctatcgag agtcgaacta gcgcagtact tgatgtctcg
       61 tttcgggttg acggcaaatt ttctctacga gagccggcac gaacgctctg cgccgcactt
      121 gggccacgtg gaactggcca gcgtctatca cggcgcattg tttcgaccgt tgccgagcat
      181 catcgacgat ggtccggcca aaatgttgga ggttcgatcg gtcatcaata cgcctagttt
      241 ttagtcttct gatcaaagct acggcaattc ttcgagaaat tttcacgcag tccgcttgac
      301 ttgaagatgt ttaaactcac tcgcgcgaca gcgtcgctcg cctaacaata ttttctcgag
      361 aaaaaatttc gaacagcgtt ccctgcattt actacggcat cgaacaagat ttcgacggcg
      421 gcggcgatca cgatagttat gtgcgcgagt gtatgttcgg cggccagtgg ggcgccttcg
      481 acagcaccgg agcccacttc ttcaagccgt cccatccgat ttacaaaagc atcgcgcaga
      541 tcgcggcgat ccggcgagac gagcccgcat tgcgcaacgg tcggcaatat tttcgggaag
      601 tttccggcaa cggcatcgac ttcggttatc ccatcgacgg caaatgcacg ctggcctatt
      661 cgcgaattct cgacgacagc gaaattttga tcgcgctcaa tctcgatgcg gcgccgcgcg
      721 cggactacat caccgtggac gcgcatctca gcgcagcagg tacgcagctc cagaatcttc
      781 tcgatccgcg ggcgcagttt gaagtcgaag cgcaaggccc gcgacacgcg gtcaagattc
      841 cgctcgcggg ccacggcatg gcgattctgc gccaagagta actattccgg ggcgcgtcga
      901 atccgctgat ggatcctaac cgatgaacag ctcgtccatc ggcagcatgg ttttcagcaa
      961 gccctgttca atttggtagc gattgagcgc cgccagcgcg cgtttttcat tcacgcctat
     1021 cctataggca tagggatctt cgccgataac gtcgcgttct ttggcgttgc cggcgatctc
     1081 atcggcgtcc atgtagggcg ccgcggcatc gcgcgctgcc ttgaacgcgc gcgtaagttt
     1141 ggcgggcagg tcgggatgct tgtcgaccac cgcttggctc agcgtgataa catgaatgat
     1201 cggattgatg cccgtctgtt tggtgtagcg gatgatttca tcggtgtcgt cgaacagttg
     1261 tttgacgccg ggatacttcg ccatcatggg tgccgtggtg ccgccgccga acagcccgag
     1321 gtagccgaaa tcgccgggca cgatggcgcc gtggagcacg ccctcgctga gtaacttgga
     1381 aagctgcaat ttctcttcgc cgaagggcgg cggcggatcg atgcgctcga ccttgaccgg
     1441 caactcattg ccgatgtaga cctctcggcc cgagacaaac cattgcatgt cggtggtttt
     1501 gatattgtac gcgtcgagca agtagccgcg cgcccagacc gcggccgtcg cgccgtaacg
     1561 aaaggacccg aattttttcc ctttgagatc agaagggtgc ttcaatctgc cttcgcagta
     1621 aaaaatgttg cgctggcgcg gtccgcgttc gaagaacacg ggtattgctc tgaatgggcg
     1681 ctttttttcg aaggcgcgca gcagcgttgc catggagcat tcgccgacat cccactcacc
     1741 ctgaagaaat cggtaatgac gttcgccgga agagacgaag tcgtggcaaa tctccagatc
     1801 gtaaccgtcg atgccgattt tgccgtcgat cagcgcgcga cagcgcgggt gatccggcag
     1861 acctaaggtt attttcggtt tatcggccat cagataatcc tttcgggatg ctttggtttc
     1921 ccgacgccgt tgcgcctttt gcgagagcac gcaacggtcg caaatcagaa t
//
LOCUS       DATIRS010000996         3622 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1846298, whole genome shotgun sequence.
ACCESSION   DATIRS010000996 DATIRS010000000
VERSION     DATIRS010000996.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3622)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3622)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3622
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1846298"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(66..851)
                     /locus_tag="VLM90_12630"
     CDS             complement(66..851)
                     /locus_tag="VLM90_12630"
                     /inference="COORDINATES: protein motif:HMM:NF024859.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSQ13864.1"
                     /translation="MILGIDHLVIVVNDLDQAARDYQQLGFTVVPGGQHPVGSHNVLI
                     SFADGSYLEIIAFYREAIDHRWWDPLQKGERLVDFCFQTDDLRGDTKKLQDAAVAINN
                     PVPWSRKRPDGYELKWLLSLATGGHRGVAPFLIEDVTPRSERIPQQFVHANQTAGIEK
                     LLVAVGELGQIGKWYGALLGVKGEPFADATLGADGLRFQVGAHALDFVSPRAAHSPLV
                     HWLREFGPSPYAAVLKSARDGVETLESGLSHGAQFLVRGNLPR"
     gene            complement(949..1947)
                     /locus_tag="VLM90_12635"
     CDS             complement(949..1947)
                     /locus_tag="VLM90_12635"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ13865.1"
                     /translation="MASFGLTLANRGVIIGAVTVPELFDMAKRGEDSGAFSAVWVGDS
                     LLAKPRLESITLLSALAVVTKKVQLAVGCMATFPHRHPALLAQQWASLDVISGGRSWL
                     AVCLGGPNEQSPAQALEHKVMGIKDTERVARLEEGIVILKKLFHEEKASHKGRFYEFE
                     GVTIQPRPIQNPLPIWIASNPTGLTWKDGASAPSPAVEKGLRRVAKYADGWMTNKVTP
                     EEFKSQWTRILAMAKEEGRDPSKIGSSLYHNININENRQAALDESKAFLDKYYTSNFS
                     MKFVEGFTTAGSPKQCIDELKAYFAAGIEHVTLRMTSWDQNGQLKRFLDEVVPAFK"
     gene            2486..>3622
                     /locus_tag="VLM90_12640"
     CDS             2486..>3622
                     /locus_tag="VLM90_12640"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ13866.1"
                     /translation="MKASFRDYVDTLRKNNELLEITKPVDLRDVAALVAQSEKALLFK
                     NLPGYSMSLVSGLLQSRNRIALGMGVAYENIADKLGKAMDKPIAPRRVANAPVKEVRI
                     TGKKINLFDLPVPVFSIMDGGPMITGGVVIAEDPEFGINAGIYRLMLKERNITGIDIV
                     TPNNMRKFAERALAKKQPLPISISIGTHPYELVAATFKANLGVNELTFAGGLRNEALR
                     LADGETVPVPCIADAEIVLEGEILPEGWVHTEGPFSEFNRLMGGMHMNPRVRIKSIMH
                     RKDAIYYALQMPWENIWMSAPIYEAAARRVLFEAGVQTVAINVTPGGCCHWHIVASIK
                     KVPGDGKNAIMALLSIADIKHVTIVDDDIDVFDPIDVEWAVATRV"
BASE COUNT          764 a         1064 c         1040 g          754 t
ORIGIN      
        1 actccgtcga caccatccag cggcgtaaac actttccgcg cggtttcatc gacgcatcct
       61 gcttgtcacc gtggcagatt cccgcgcacc agaaattgtg cgccatggct gaggccgctc
      121 tcgagtgtct ccacgccatc cctggccgac ttcaagaccg ccgcataggg cgacggacca
      181 aattcacgca gccaatgaac cagcgggcta tgggctgcac gcgggctgac aaagtccaag
      241 gcatgggcgc ccacttggaa gcgcaggccg tcggcgccga gggtagcgtc ggcaaagggt
      301 tcgcctttga cgccgaggag cgcgccatac catttgccga tttgcccaag ctcgccgacc
      361 gcgacgagca atttttcgat gccggctgtt tgattggcat ggacgaactg ctgcggaatt
      421 cgctcgctac gcggagtcac gtcttcgatc agaaatggcg ccacgccgcg gtgaccgccg
      481 gtggccagtg acaggagcca cttgagctca tagccgtccg gccgtttgcg cgaccagggc
      541 acggggttgt tgatcgcgac agcggcatcc tgcaatttct tggtgtcgcc gcgcagatcg
      601 tcggtttgaa agcaaaaatc gaccaaacgc tcgccctttt gcagggggtc ccaccagcga
      661 tgatcgatcg cttcgcggta aaacgcgatg atttccagat aggaaccatc ggcaaacgag
      721 atcaagacat tgtggctgcc caccggatgt tggccgccgg gcaccacggt gaagccgagc
      781 tgttggtagt cgcgcgcggc ctggtcgaga tcattgacga caatgacgag atgatcgatg
      841 ccgagaatca taaaatacct ggagtgatgg agtactggag ttctggagtg ttgggataaa
      901 tcttcttagc cactacgcca acattccatt actccaatgt agcctggttt atttaaacgc
      961 cggcacgact tcatcgagaa aacgcttgag ctggccgttc tgatcccatg acgtcatgcg
     1021 cagggtcaca tgctcgatgc cggcggcgaa ataggcttta agttcatcga tgcactgttt
     1081 cgggctgccg gcggtggtga agccctcgac gaacttcatg ctgaaattcg acgtgtagta
     1141 tttatcgagg aacgctttgc tctcgtccaa tgccgcctgg cggttctcgt tgatgttgat
     1201 gttgtggtac agcgagctgc cgattttcga cggatcgcgg ccttcttcct tggccattgc
     1261 caagatgcgc gtccactggg acttgaattc ttccggtgtg accttgttgg tcatccagcc
     1321 gtcggcgtat ttcgccaccc gccgtagacc tttttcgacg gcaggcgatg gcgcgctggc
     1381 gccatctttc cacgtcaggc cggtgggatt gctggcgatc cagattggca gcggattctg
     1441 aatcggccgc ggttgaatgg tcacgccctc gaattcatag aagcgcccct tatgcgatgc
     1501 cttctcttca tggaagagtt ttttcaaaat gacgatgccc tcttcgaggc gggcgacgcg
     1561 ctcggtgtcc ttgatgccca tgactttatg ctcgagggct tgagccgggc tctgctcgtt
     1621 gggaccgccg agacagaccg ccagccagga gcggccgccg gagatcacgt ccaagctcgc
     1681 ccattgctgc gccagcagcg ccggatggcg gtgcggaaag gtcgccatgc agccgacggc
     1741 gagttggact tttttcgtca ccacggccag agccgacagc aaggtgatcg attccagccg
     1801 cggcttggca agcagactat cgccgaccca gacagcgcta aatgcgccgg agtcctcgcc
     1861 ccgtttcgcc atgtcgaaca gttccggtac cgtgaccgcg ccgatgatca cgccgcgatt
     1921 cgctaaagtc agtccaaatg aagccataga tcgcctttcg aattgcctaa gttcgcccgc
     1981 gttataacac atggtgtcgt ctttgcgaaa tgtgcagagg ggggttctcc accacgaagt
     2041 gaatcatgat cttacgcatg tccacggcta atgaaaatgg cgaaacccgt aggatgtggt
     2101 gagtccgcga accgcatcga gcgagcgcga cctacctaca gagcatgaaa atggttggta
     2161 ttcccagaac atgcttccct cctcgattcg tcattcccgc gcacgcggga atccaggtga
     2221 cggaccgagt ccgtcatacc gttgataccc gctttcgcgg gtatgacgga accccggagg
     2281 ctcttcgttg tggatatcat cccctcaccg atattttcgc aggagggcac gaagtacgtg
     2341 acttaattat cctaaacctt cgtgtgcttc gtgccttcgt ggtgagaacc atcctctgcg
     2401 ttagatcgac tgttacaccg tgtgattgga attagccgga tcgccatgtt aagtctcctc
     2461 gaaataaatc cctgggagta aatccatgaa ggcgagcttt cgcgattacg tcgatacctt
     2521 gcgcaagaac aacgagctgc tggaaatcac caagccggtg gacctgcgcg atgtcgcggc
     2581 gctggtggcg cagtcggaaa aagctttgct gttcaaaaac ctgccgggtt attccatgtc
     2641 tttggtttcc ggactgctgc aatcgcgcaa ccgcatcgcg ctgggcatgg gcgtcgccta
     2701 tgaaaacatc gccgataagc tgggcaaagc gatggacaag ccgatcgcgc cgcggcgggt
     2761 cgccaacgcg ccggtgaaag aggtcaggat caccggcaaa aaaatcaatc tcttcgacct
     2821 gccggtgccg gtcttctcga ttatggatgg cgggccgatg atcaccggcg gcgtagtcat
     2881 cgccgaagac cccgagttcg gcatcaacgc cggcatctat cgcttgatgc tcaaagagcg
     2941 caacatcacc ggcatcgaca tcgtcacacc caacaatatg cgcaagttcg ccgagcgcgc
     3001 cctggcaaaa aaacaaccgc tgccgatatc gatctccatc ggcacccacc cgtacgaact
     3061 ggtcgcggcg actttcaaag caaacctagg cgtcaacgaa ctgaccttcg ccggcggctt
     3121 gcgcaatgaa gcgctgcggc tggccgacgg cgaaaccgtg ccggtgccgt gcatcgccga
     3181 tgcggaaatt gtcctggaag gcgaaatcct tcccgaaggc tgggtccaca ccgaaggacc
     3241 gttttcggag ttcaaccggc tcatgggcgg catgcacatg aacccgcggg tgcgcatcaa
     3301 gtcgatcatg catcgcaaag acgccatcta ctacgccctg caaatgcctt gggaaaacat
     3361 ctggatgtca gcgccgatct acgaggccgc ggcgcgccgg gtgttgttcg aggccggtgt
     3421 gcaaaccgtc gcaatcaacg tcacgccagg cggctgctgc cactggcata tcgtcgcctc
     3481 gatcaagaag gtgccgggcg acggcaaaaa cgcgatcatg gcgctgctct ccatcgccga
     3541 catcaaacat gtcaccatcg tcgatgacga catcgatgta tttgacccaa tcgacgtcga
     3601 gtgggcggtc gccacccggg ta
//
LOCUS       DATIRS010000997         2213 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1748457, whole genome shotgun sequence.
ACCESSION   DATIRS010000997 DATIRS010000000
VERSION     DATIRS010000997.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2213
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1748457"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..637)
                     /locus_tag="VLM90_12645"
     CDS             complement(<1..637)
                     /locus_tag="VLM90_12645"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13867.1"
                     /translation="MVATRLLLIAVLMLWAAPVRAESIRIAYSGVAASGTPVWLAKEE
                     GLFAKHGLEADLVAVRSAPIQVTALVSNEVQFVRGSASSMLTAAAQGAKLKIIMSLFA
                     ERASYDFLVAPSITKPADLRGKKIGVQDFSGLLWSLTMLSLREMGLDPQRDNISIQAI
                     GDSTVIAQSLASGIIDGAALDKLQSARLQTLGVKPLLDLSKIPLPSSPFMCA"
     gene            807..2099
                     /locus_tag="VLM90_12650"
     CDS             807..2099
                     /locus_tag="VLM90_12650"
                     /inference="COORDINATES: protein motif:HMM:NF006771.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20 family metallo-hydrolase"
                     /protein_id="HSQ13868.1"
                     /translation="MKRLPAANAPSPLPAINQRRLMRDLNAIGRIGIGNRGGVTRLVF
                     SIKELRSRQVLIHLMRQAGLKIYIDAIGNIFGRLEGRDAKAPAVLSGSHLDTVIHGGK
                     YDGPVGVIGALEAVRTIGENKIPILSPLEVVCFVGEESSRFGFSTLGSSLVAGEVHAK
                     DLANAVDAQGTKLADVLSSLGIAAKSLRGLARDPKSLKAYLELHIEQGPILEAIGKRI
                     GLVTSIAAPSRFKVIFTGQADHSGTTPMEMRKDALVAAALLIEFIETTCRRFSSMAKG
                     RVVGTVGAMKIEPGVINAVPGRTELLVDIRAITAQAKNRVARLVKAQAQHIARQRAIG
                     VEVLTIREEDPVPLDKRLLRLTRQICDAKQIIYEIMPSGAGHDAMQMAKITPAGMIFI
                     PSQRGISHNPLEWTDADDIGLGAQLLMETMIRVANETF"
BASE COUNT          477 a          708 c          642 g          386 t
ORIGIN      
        1 cagcgcacat gaaggggctt gagggcagtg gtatcttgct caagtcgagc aacggtttca
       61 ctccaagggt ttgcagccgc gccgactgca atttatccaa cgcggcgccg tcgatgatgc
      121 cggatgccaa tgactgggcg atcacggtgc tgtcgccgat cgcttggatg ctgatgttgt
      181 ccctttgcgg gtcgagaccc atttcacgca gcgacagcat ggtgaggctc cagagcagac
      241 cgctgaaatc ctgcacgccg attttcttgc cgcgcaaatc ggcgggcttg gtgatcgacg
      301 gcgccaccag aaaatcgtag gaagcccgtt cggcgaacag cgacatgatg atcttgagct
      361 tggcgccttg ggcggcggcc gtcagcatac tcgaggcgct gccgcggacg aactgcactt
      421 cgttggagac cagcgccgtg acttggatcg gcgcgctgcg cacggcaact aggtccgctt
      481 caagtccatg cttggcgaag aggccttcct ctttagcaag ccacaccggc gtccccgaag
      541 cggccacgcc ggaataggcg atgcgaatcg actcggcgcg caccggcgcg gcccacagca
      601 ttagaacagc gatcagcaag agtcttgtag cgaccatggc gactatcctc cctgcacagg
      661 ttacgagaga tattgggaac caagcgttgc taatggccgc ttctaacatg aggccggttc
      721 gcctgacaat gacaatcgct ctccccggtc accggcagaa aaatttgaat tctcagggac
      781 gccggaaact gctagagtga ctgcgaatga aacgcctgcc cgcggcaaac gctccatccc
      841 ccctgcccgc catcaaccag cgccgtctca tgcgcgactt gaacgccatc ggccgcattg
      901 gcatcggcaa tcgcggcggt gtgacgcgtc tggtattttc catcaaagaa ttgcgcagcc
      961 ggcaagtatt gatccacctg atgcgccagg ccggattgaa aatctacatc gacgccatcg
     1021 gcaacatctt cggccggctc gaaggtcgcg atgcaaaagc gccggcggtg ctgtcgggct
     1081 cgcacttgga cacggtgatt catggcggca agtatgacgg cccggtgggc gtcatcggcg
     1141 cgctggaggc ggtgcgcacc atcggcgaga ataaaattcc aatcctctcg ccgctggagg
     1201 tcgtctgctt cgtcggcgag gaatcgagcc gctttggctt ctcgaccctc ggcagcagcc
     1261 tggtggccgg cgaagtccat gcgaaagatc ttgccaacgc ggtcgacgcc cagggaacca
     1321 agctcgccga tgtactttca agccttggca tcgcggcgaa aagcttgcgc ggcctcgccc
     1381 gcgatccgaa aagcctcaag gcctatctcg aactacacat cgaacaaggg ccgatcttag
     1441 aagccatcgg caagcgcatc ggcctggtca catccatcgc cgcaccgagc cgattcaaag
     1501 tcatcttcac cggccaggcc gaccactccg gaacgacacc gatggagatg cgcaaagacg
     1561 ccctggtcgc cgcggcgctg ctgatcgagt tcatcgaaac aacttgccgc cggttctcgt
     1621 ccatggccaa aggccgcgtc gtcggcaccg tcggcgccat gaagatcgaa cccggcgtca
     1681 tcaacgccgt gccgggcaga accgaactgc tggtcgatat ccgcgccatc accgcccagg
     1741 cgaaaaaccg cgtcgcccgc ctggtcaagg cgcaagcgca gcatatcgcg cgccagcgcg
     1801 ccatcggcgt cgaagtcctg acgatacgcg aagaagaccc cgtgccgctg gataagcgcc
     1861 tcttgcggct gacccggcaa atctgcgatg caaaacaaat catctatgag atcatgccgt
     1921 cgggcgccgg ccacgacgcc atgcagatgg ccaagatcac tccggcgggg atgatattca
     1981 ttcccagcca acgcggcatc agccacaacc cgctcgaatg gaccgatgcc gacgacatcg
     2041 gcctgggcgc gcaattactc atggaaacga tgatccgagt cgccaatgaa acattctaac
     2101 aagccgttga aaaagcctca taggccacag cctgcccgcg gcgggcgtta ccatagttgc
     2161 actcaatcgc cgcgcgtcaa cgtactggca agtacgccgc cgctcgtcga tcc
//
LOCUS       DATIRS010000998         1994 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1649931, whole genome shotgun sequence.
ACCESSION   DATIRS010000998 DATIRS010000000
VERSION     DATIRS010000998.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1994)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1994)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1994
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1649931"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            163..1467
                     /locus_tag="VLM90_12655"
     CDS             163..1467
                     /locus_tag="VLM90_12655"
                     /inference="COORDINATES: protein motif:HMM:NF013741.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HSQ13869.1"
                     /translation="MTLDNFWFQAILILALIFANGFFAASEIAMIAMRKSRIEALVDK
                     GVKAAAAVARLKADPDRFLATVQIGVTVVSSFASALGGAAAIGYLKPEIEALPFALAA
                     RWADAIALTIVVLPIAYFSLVLGELVPKSLALRFSEPIACFVAPPIELLARVSAIFVR
                     FLSASSNLVLKLFGGKDAGSVSFISVDEVKSLIREGAARGIFNETEKELIHSVFEFTD
                     TPVKAVMKPRTEIHAIEVHASLAEVAKNFVDSGFSRVPVYEGDLDKVIGILYNKDVFK
                     ALQEHSDFQLRDHLHPAFFVPSTLPISELLKQLQRRRLGMALVVNEFGEIEGLATLED
                     LIEEIVGEIRDEYDREERGPVERLPDGSMVIAGSALLKDLKIDFDLPFEESPDYHTLA
                     GLLLARLKRIPRGGEWIDEFGYKLTIVDMEGRRIVKIKVEKA"
     gene            complement(1552..>1994)
                     /locus_tag="VLM90_12660"
     CDS             complement(1552..>1994)
                     /locus_tag="VLM90_12660"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSQ13870.1"
                     /translation="IGSLERSYAMGRFKITALDHIVLNVGDIDRALTFYTEVLGLAGE
                     RVELFRAGKAGFPSVRINDATIIDLFPRKPVDSRSVTEKVDGNLNHLCLVVDAGDFAG
                     VIEDLKKNQIAIREGPVSRWGARGQATSVYFLDPDGNEIEIRCY"
BASE COUNT          429 a          597 c          536 g          432 t
ORIGIN      
        1 ttgccttttc ccggtgggcg gctagaattc ataccagccc ccatgcccag tcgcagccca
       61 cgcccgcggc cccgacaaga ccggtcgatt tgctagcacc accacgctgt tttgcgcttc
      121 gctcgctgca tcgaagccca aatcccagag gagacggcac cgatgactct cgataatttt
      181 tggtttcaag cgattttgat cctcgcgttg attttcgcca acggcttctt tgccgcttcc
      241 gagatcgcca tgatcgccat gcgcaaaagc cgcatcgaag ccctggtcga caaaggggtt
      301 aaggccgccg cggcggtggc ccggttgaag gccgaccccg atcgcttcct cgccaccgta
      361 cagatcggcg tcaccgtggt cagctccttt gcctccgccc tcggcggcgc cgccgccatc
      421 ggctatctca aaccggagat cgaagccttg ccgttcgctc tggctgcccg ctgggccgat
      481 gccatcgccc tgaccatcgt cgtcttgccg atcgcttatt tttcgctggt tctcggcgag
      541 ctcgtgccaa aatctttagc tttgcggttt tccgaaccga tcgcctgctt cgttgccccg
      601 cccattgaat tgctggcgcg ggttagtgcg atcttcgtca gattcctgag cgcgtcgagc
      661 aatctggtgc tcaaactttt tggcggcaag gatgccggca gcgtcagttt catctccgtc
      721 gacgaagtca aatcattgat tcgcgaaggc gccgctaggg gcatcttcaa cgagaccgaa
      781 aaggaattga tccatagcgt gtttgagttc accgacacgc cggtcaaagc ggtcatgaaa
      841 ccgcgcaccg agatccatgc catcgaagtg cacgcatcac tggccgaggt ggcgaagaat
      901 tttgtcgaca gcggcttttc ccgcgtgccg gtttacgaag gcgatctcga taaagttatc
      961 ggcattctct acaacaaaga tgtcttcaaa gctttgcagg agcacagcga ctttcaatta
     1021 cgcgatcatt tgcatccggc gttcttcgtc cccagcaccc tgccgatcag cgaactgttg
     1081 aaacagctac aacggcgccg cctaggcatg gctttggtgg tcaacgagtt cggcgaaatc
     1141 gaaggcctcg ccacgctgga agacttgatc gaggaaatcg tcggcgagat ccgtgacgaa
     1201 tacgaccgcg aagaacgcgg ccccgtggag cgcctgccgg acgggtcgat ggtgatcgcc
     1261 ggctcggcac tgctcaagga tctcaaaatc gatttcgacc tgccattcga agaatcgccg
     1321 gactatcaca ccctcgccgg cttattgctg gcgcgcttga aacgaatccc gcgcggcggc
     1381 gaatggatcg atgaattcgg ctacaaactc accatcgtcg acatggaagg ccggcgcatc
     1441 gtcaaaatca aagtcgaaaa agcatagcgg cgtagaaaca tgaggcaatg gagtgttgga
     1501 ggactggagt attgggcccg caacactcca ttactccgtc actccggttc ttcagtagca
     1561 gcgaatctcg atctcattac cgtcaggatc gagaaaatac accgaagtcg cctggccgcg
     1621 cgcgccccag cgcgacaccg gaccctcgcg aatggcgatc tggtttttct ttagatcttc
     1681 gatgacgccg gcaaaatcgc cagcatcgac gaccagacat agatggttga ggttgccatc
     1741 gactttttcc gtaaccgatc gactgtcaac cggcttgcgg ggaaaaagat cgatgatcgt
     1801 ggcgtcgttg atgcgcacag aaggaaaacc ggccttgccg gcgcgaaata gttcgacccg
     1861 ttcgcctgcc aagcccaaca cctcagtata aaatgttagc gccctatcga tgtcgccgac
     1921 attaagcacg atatgatcga gcgcggtaat tttgaatctg cccatggcgt aactcctttc
     1981 gagggagcca atat
//
LOCUS       DATIRS010000999         4283 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1256930, whole genome shotgun sequence.
ACCESSION   DATIRS010000999 DATIRS010000000
VERSION     DATIRS010000999.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4283)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4283)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4283
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1256930"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            112..1287
                     /locus_tag="VLM90_12665"
     CDS             112..1287
                     /locus_tag="VLM90_12665"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF022137.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent rRNA methyltransferase"
                     /protein_id="HSQ13871.1"
                     /translation="MLQIFLKPNRDVPIRRGHPWIFSGAIERCQGDDQIVDVADIFDN
                     KKNWLGRGLYNPKSTLRVRLLTWEKETIDQGFFANRLFQALAFRAEQLGAASNAYRLI
                     NGEGDLLPGLIVDRYADYFVCQFYTAGMESFKEEIVAALSELCPGTGIFERSEGRVRE
                     EEGLEAVVGVLACEPPPETLAIRENGHKFLVDLRRGQKTGFFLDQRDSRQFLSTLTRG
                     RSVLNCFAYTGGFSVYAYAGGAKEVVTFDSSMPALELAEKNLQLNGFADAPGEVIKGD
                     AFAYLKETDGKFDVIVLDPPSLAHRRGDLDAATGGYKFLNLHALKHLNPGGILLTFSC
                     SQHLPRELFQKVIFGAAVDAGRKASIVKQLSHPIDHPVSLHHPEGEYLKGLALRMMD"
     gene            1471..2226
                     /gene="radC"
                     /locus_tag="VLM90_12670"
     CDS             1471..2226
                     /gene="radC"
                     /locus_tag="VLM90_12670"
                     /inference="COORDINATES: protein motif:HMM:TIGR00608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HSQ13872.1"
                     /translation="MIVESRTAVSLAALTLCREVFMTLSYTIKEWPEEDRPREKLLAK
                     GAPALSETELLAIILRNGDAASGNSAIDHARLLLNQFGGLKGLDDAAVAELCSIKGIG
                     PAKVAQLKACLEIGKRIGSQKWETGQPLHSANDVFQHFRESLGREKRESFYVVLLDNK
                     NRKMREVKVSEGSLTASLVHPREVYNPVIRESAAGVIFVHNHPSGDPAPSPEDIDITK
                     RLKDVGDVMGVRVLDHVVIGHDRYFSFNEKGLL"
     gene            2495..2713
                     /locus_tag="VLM90_12675"
     CDS             2495..2713
                     /locus_tag="VLM90_12675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13873.1"
                     /translation="MIYVVLFAIVAAGGYFLIPRFEWHKTQIKITPDSETLGLGSLQI
                     EVAEQGTGLKSFSATLNSGGTDYPLAAE"
     gene            2774..3871
                     /locus_tag="VLM90_12680"
     CDS             2774..3871
                     /locus_tag="VLM90_12680"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HSQ13874.1"
                     /translation="MKEGPAVLRVSARDNSLWNFFRGNETVLQKNLTIDITPPSLEII
                     ADDRYVNFGSVGVIVYKPSPDTVTTSIKIGNYFFPGYKGQIKSQPDHYVAFFAHAYNV
                     GEDERATLVATDKAGNTREARLAYTLKNVKYKKSTLKISEDFLRNKVTPLVNDVGARQ
                     GAPKDIFIKVNKALRKENEDKIKAITEKSTPSILWQGAFSQLSNSKVEANFADARTYV
                     YNDEEIDQAYHLGYDLSVTKHYPAEAANHGVVAFVGDLGIYGNTVIIDHGLGLFTLYS
                     HLSSIDVKVCDAVKQHQPIGKTGETGLAGGDHLHFGVYLHGVAILPVEWWDQKWSKDH
                     IQPKLDGLTGESAAAAQESKAAQKPVRKRRR"
     gene            complement(3944..>4283)
                     /locus_tag="VLM90_12685"
     CDS             complement(3944..>4283)
                     /locus_tag="VLM90_12685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13875.1"
                     /translation="VLFSLLSVAMVAAIPHLGSGIVLAAGLGVLGGLLWALRPVIVSA
                     AMSEAPQQLSGSIVALIYGANMGLSFLAPLLTGIVADSYGLPTAVTAIAVFPMMASLI
                     CFILLVQRRR"
BASE COUNT          991 a         1277 c         1152 g          863 t
ORIGIN      
        1 actggagtat tgggaactcc ggaacccatc attccagcac tccatttact ccatcactcc
       61 aacatcccga actgaaccat cgcgccacac cctcagaaat tggcaagccc aatgctgcaa
      121 atatttctca agcctaaccg cgatgtgccg atccggcggg gtcatccgtg gatattttcc
      181 ggcgccatcg agcgctgcca aggcgacgat caaatcgtcg atgttgccga tatcttcgac
      241 aacaagaaaa actggctcgg ccgcggcctc tacaatccca agtcaacgct gcgcgtgcgc
      301 ctgctcacct gggaaaaaga gaccatcgat caaggcttct ttgccaaccg cctgttccaa
      361 gcgttggcct ttcgcgccga gcaattgggc gcggccagta acgcctaccg gctgatcaac
      421 ggcgagggcg atcttctccc cggtctcatc gtcgaccgct acgccgacta ttttgtctgc
      481 cagttctaca ccgcggggat ggagtcgttc aaagaagaga tcgttgccgc gttgtcggag
      541 ctttgcccag ggaccggcat attcgagcgc agcgaaggcc gcgtgcgcga agaggaaggg
      601 ctcgaggctg tcgttggcgt acttgcctgt gagccgccgc cggagaccct cgccatccgg
      661 gaaaatggcc ataaattcct ggtcgacctg cggcgcgggc aaaaaaccgg cttctttctc
      721 gatcagcgcg atagccggca gtttctttcg accctgacgc gcggccgatc agtgcttaat
      781 tgcttcgcct ataccggcgg cttttcggtt tacgcctatg ccggcggcgc caaggaagtc
      841 gtcaccttcg attcatccat gccggccttg gagctggccg agaaaaattt gcaactgaat
      901 ggcttcgccg acgcgcccgg cgaggtcatc aaaggcgatg cctttgcata cttaaaagag
      961 accgacggca agttcgacgt gattgtcctc gacccgccat cgctggcgca ccggcgcggc
     1021 gacctggacg ccgccaccgg cggctataaa tttctaaact tgcatgcgct caagcatctc
     1081 aatcccggcg gtatcctgct gaccttttcc tgctcgcagc atctaccgcg ggagctgttt
     1141 caaaaagtca tttttggcgc cgccgtcgat gccggtagaa aagcttcgat cgtcaaacaa
     1201 ctcagccatc ccatcgacca ccctgtcagt ctgcatcacc cggaaggcga gtacctcaaa
     1261 gggttggcgc tgcgaatgat ggattgattc gacttttcgg gtagttgtca taccctgagc
     1321 gaaagtgaag gggcccatct tgagaacttt cgcaatattg acgaatatcg agatctctcg
     1381 gcgaagtcta tcctgaacag gtcgaaggag ctcgacagtg gtcgtgattg ctgaacccgt
     1441 caatcacccc tttgagccgt cgcgctgagt gtgatagtcg aatcacgcac tgcggtctct
     1501 ctggccgcgc tgacgctgtg ccgcgaggtg ttcatgaccc tatcgtacac catcaaagaa
     1561 tggcccgaag aagaccggcc gcgagaaaaa ctgctcgcca aaggtgcgcc ggctttgagc
     1621 gaaaccgagc ttttggcaat tatcttgcgc aatggcgacg ccgccagcgg caacagcgcc
     1681 atcgaccacg cgcggcttct gctcaaccaa ttcggcggac ttaaagggct cgacgacgcg
     1741 gcggtcgccg aactatgcag tatcaaaggc atcggcccgg ctaaagtcgc ccagctcaaa
     1801 gcttgtctgg agatcggcaa gcgcatcggt agccagaaat gggaaaccgg ccagccgctc
     1861 cactccgcca acgatgtctt tcagcatttc cgcgaaagcc tcggccggga gaagcgggag
     1921 tctttctacg tcgtcctgct cgacaacaaa aaccgcaaga tgcgcgaggt caaagtctcc
     1981 gagggatcgc tcaccgcgtc gctggtccac ccgcgcgagg tctacaatcc ggttattcga
     2041 gagtccgccg ccggcgtcat cttcgtgcac aatcatccga gcggcgaccc ggcgccgagc
     2101 cccgaggaca tcgatatcac caaacggttg aaagacgtgg gcgatgtcat gggcgtgcgc
     2161 gtgctcgacc atgtcgtgat cggccatgac cgctacttta gcttcaacga aaaaggcttg
     2221 ctctgattca cggttccgac agcaagtaat tttcccccgt gctcataatt gtacctgcgc
     2281 cagccacttt gtcatttcga ccgcagggag aagtctcttc cgtttttcag gcgttggtgc
     2341 gattgaccgg ttacgccggt ggttttgatt gacatcatta ccgacggcgt ttatcttgac
     2401 tggaccatct cacagccttt ctagattctt tatataaagc atgagatcac tcgaactagg
     2461 cagacccaag aggagcttcg tccccgggcg aggcgtgatc tacgtcgtgc ttttcgccat
     2521 cgtcgctgcc ggcggttatt ttttgattcc gcgcttcgaa tggcacaaaa cgcagatcaa
     2581 gattactccc gacagtgaaa ctcttggctt gggatcgcta cagatcgagg tcgccgaaca
     2641 aggcaccggg ttaaagtcat tttccgccac gctcaattcc ggcggcaccg attacccttt
     2701 ggccgcggag tagtacaccg agccgacgct gcaaaaaaaa ctcacggtcg cgctgtcatc
     2761 caagctcgcg ggcttgaaag aagggccggc ggttctgcga gtcagcgcgc gggacaattc
     2821 gctgtggaat ttttttcgcg gcaatgagac ggtgctgcag aaaaacctca ccatcgacat
     2881 caccccgcca tcgcttgaga tcatcgccga tgaccgttac gttaacttcg gcagcgtcgg
     2941 cgtgattgtt tacaaaccat cgccggacac ggtgacgacg agtatcaaga tcggcaatta
     3001 tttttttcct ggctataagg gacagatcaa gagccagccc gatcactacg tcgccttctt
     3061 cgcccatgct tacaacgttg gcgaggatga gcgcgccacg ctggttgcca ccgataaagc
     3121 cggcaacacc agagaagcgc gcctcgccta cacgctcaag aacgtcaaat acaagaaaag
     3181 cacccttaag atctcggagg attttctccg caacaaagtc acccctctgg ttaacgatgt
     3241 cggcgcgcgc cagggagccc ccaaagatat ttttatcaaa gtaaacaaag cgctgcgcaa
     3301 ggaaaacgag gacaagatca aagcgatcac tgaaaagtcg acgccgtcga ttctatggca
     3361 gggcgccttc agccagctga gcaattccaa ggtcgaggcc aatttcgccg atgcacggac
     3421 ctacgtttac aacgacgaag aaatcgatca agcctatcat ttgggttacg acctttcggt
     3481 gactaagcac tacccggccg aggcagcgaa ccatggagtc gtcgccttcg tcggcgatct
     3541 gggcatctac ggcaatacgg tgatcatcga ccatggtctt ggcttgttca ccctctactc
     3601 gcatcttagt tccatcgatg taaaagtgtg cgatgccgtg aaacagcatc aacccatcgg
     3661 caagaccggc gaaaccggcc tggccggcgg cgatcacttg cactttggcg tctatctcca
     3721 cggcgttgcg atcctgccag tggaatggtg ggatcagaaa tggagtaagg accacatcca
     3781 gccgaagtta gatgggctga ccggtgaaag cgctgcggcg gcgcaggaaa gtaaagccgc
     3841 tcaaaagccg gtgcgcaaac ggcgccggta gaactcgcgc agcctaatcg accggcaccg
     3901 gacaatttga gatccctgtt agacgattcg agaatgccta gtatcagcgc cgccgctgca
     3961 ccagcaagat aaagcagatc aacgatgcca tcatcgggaa gaccgcgatg gcggtcacgg
     4021 cggtcggcaa gccgtaacta tcggcgacga tgcccgttaa cagcggcgct aagaacgaca
     4081 gtcccatatt ggcgccatag ataagcgcga cgatgctgcc agacagttgt tgcggcgcct
     4141 cagacatcgc cgccgaaacg atcaccggcc gtaacgccca gagcaaacca cctaaaacgc
     4201 ccaagccggc cgccaggact attcccgacc ccagatgcgg gattgccgcc accatggcga
     4261 cgctcagcag agaaaacagc aca
//
LOCUS       DATIRS010001000         2824 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_961237, whole genome shotgun sequence.
ACCESSION   DATIRS010001000 DATIRS010000000
VERSION     DATIRS010001000.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2824)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2824)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2824
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_961237"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            164..1339
                     /locus_tag="VLM90_12690"
     CDS             164..1339
                     /locus_tag="VLM90_12690"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HSQ13876.1"
                     /translation="MASAIEKYLDGLKSNDLLLQFTWEEWLAIAPPYPDRNFTSTDVT
                     ARYQRNGYDWDMHGTLYTPKQETDPRRALVFFHGGAGSEKIMDLTPDGRLGLARIAAT
                     QGFKVLALTYPGHYPPGGVWKVPIPERMPIYLMDRELSQDEIADRNLKCTFNVILQGA
                     GALTDQHLAGREIIGFGHSTGGPMAAHLARFSKRTKVIGLVGFGSGGPDGWRKEWRDQ
                     TGAEKYREIPVDHVSRRSPDSFKNSGYVDPEDLTPWGGADDYIRLVSPLRSQMKTSLC
                     DNQHNAAVGILEEYAKRTGLPREEYFDHLQEPDANWLQSIRVLLVAGENDKGHWVNGG
                     APLENKREMFMARKYAAITRGAHVVFIPRYGHVGYSELYNEKIAYLWLWAHKHGYFD"
     gene            1373..2443
                     /locus_tag="VLM90_12695"
     CDS             1373..2443
                     /locus_tag="VLM90_12695"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ13877.1"
                     /translation="MLSKTLLIFVLLMAGLPTASSLAAQAKSLSPVELALYQGKDREK
                     ILLEGARKEGQVVFYTSNTWVAGPVSQEFEKKYPFVKANVWRSDSKALLKRLTEEIAA
                     NRNIADVVETSPEYMAIMLREKMLYEHFSPELSAYDDEAKLKGKNGVYGWSNREIYIS
                     LGYNSKVIAPADAPKSIKDYLDPKWKGKMSIAGTTTGTQWIGALLELMGREFLEKLSA
                     QEINVQNISGAALSGLVASGEVPLSPTIFNSNILTHKQKGAPVEWRPLDPVIAGVGIS
                     GMVLGSPHPHAALLFLDYIHSKEGQQVAMKGGLSSPRSDIGSLEQKFKKLYLESKYTP
                     EEYEKKMNEWEGLMRKLFISKR"
     gene            2451..>2824
                     /locus_tag="VLM90_12700"
     CDS             2451..>2824
                     /locus_tag="VLM90_12700"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13878.1"
                     /translation="MSAPLKSCRALAIALCWVAMASGYGAQAAEKSAKPAVKVRISQS
                     AVSARSTILWSAQDLGLFAKHGVEAEVLYLRSSPIQMTALGTGEVQFAASGGSPVLGA
                     AAAGQDIKIIASPSNRLSYDLVV"
BASE COUNT          658 a          817 c          805 g          544 t
ORIGIN      
        1 tggtccacgc ccatatcggc ggccggccaa acattatcgg agtgttctaa gaatgtattc
       61 gctacgccaa agggtttccc gacgtttggt tcgccaccaa aggtgagatc gccaaatatt
      121 acctcgacac ctacgccagc aaatcataac cggagtcact accatggcca gcgctattga
      181 aaaatacttg gacggattga aatccaacga tctgttgttg cagttcacct gggaagaatg
      241 gctagccatc gcgccaccct acccggacag aaatttcacc agcaccgatg taaccgctcg
      301 ttatcagcgc aacggttacg actgggacat gcacggcacg ctttacacgc cgaagcagga
      361 aaccgatccg cgccgcgcct tggtcttttt tcacggcggc gcgggcagtg aaaagatcat
      421 ggacttgacg cccgacggcc ggctgggtct ggcccggatt gccgctaccc agggattcaa
      481 agtcctcgcg ctcacctatc cgggccatta cccgccagga ggcgtgtgga aagttcccat
      541 ccccgagcgc atgccgatct atctcatgga tagagagctg agtcaggacg aaattgctga
      601 ccgcaatttg aaatgcacct tcaacgtcat tctccagggg gcaggggcgc ttactgatca
      661 acatctggcg ggacgtgaaa tcatcggctt cggccattcc accggcggtc ccatggccgc
      721 gcacctggcg cgtttcagca agagaaccaa agtgatcggc ctggtcggat ttggcagcgg
      781 cggccccgac ggctggcgca aggagtggcg cgaccagacc ggcgcggaaa aataccggga
      841 gattccagtg gaccatgtgt cgcggcgctc cccggactcg tttaaaaact caggctacgt
      901 cgatccggag gacttaacgc cgtggggcgg cgctgacgat tacattcgtc tggtcagccc
      961 gctgcgttcc caaatgaaaa ccagtttgtg cgataaccag cacaacgcag cggtgggcat
     1021 cttggaagag tacgccaagc gcaccggcct gccgcgcgaa gagtacttcg atcacttaca
     1081 ggaaccggat gcgaattggc tgcagtcgat tcgcgttttg cttgtcgccg gcgaaaacga
     1141 caagggccac tgggtcaacg gcggcgcgcc gttggaaaac aagcgcgaga tgttcatggc
     1201 gcggaaatat gccgcaatca cccgcggcgc ccatgttgtt ttcatcccac gctatggcca
     1261 cgttggctat tccgagcttt acaatgaaaa aatcgcctac ctgtggctgt gggcgcacaa
     1321 gcacggttac ttcgattagc ttattatcta gccaaacaag ggagatcgct cgatgctttc
     1381 taaaacgttg ctgatctttg tattgctaat ggccggccta ccaaccgcat cctccttggc
     1441 ggcccaggcc aaatcgctgt cgccggttga actggcgctc taccaaggca aggaccggga
     1501 aaagatttta ctcgaaggcg cccggaaaga aggccaggtc gtcttttaca cgtcaaacac
     1561 atgggtggcc ggcccggtct cgcaggagtt cgaaaagaaa tatcctttcg tcaaggccaa
     1621 cgtctggcgc agcgactcca aagcgctgtt gaagcggctc acggaggaga tcgctgcgaa
     1681 ccgcaacatc gccgacgttg tcgaaaccag ccccgagtac atggcgatta tgttgcgcga
     1741 aaaaatgctc tatgagcatt tctcgccgga gctgagcgct tacgatgatg aggcaaagct
     1801 caaaggcaaa aacggcgttt acggctggtc caaccgcgaa atttacatca gcctcggata
     1861 caactcgaag gtgatcgcgc ccgcggacgc gccgaagagc atcaaagatt atctcgatcc
     1921 caaatggaaa ggaaaaatgt cgattgccgg aaccacgacc ggaacgcaat ggatcggcgc
     1981 gctgctcgag ctgatgggcc gcgaatttct cgagaagctc agcgcccaag agatcaatgt
     2041 gcagaatatt tcaggcgcgg ctttatccgg actcgtcgct tccggcgagg ttcccctatc
     2101 gccgacgatt tttaattcca acatcttgac ccacaagcaa aaaggcgcgc cggtggaatg
     2161 gcgccccttg gacccggtga tcgccggcgt cggcatttcc ggtatggtgc ttgggtcgcc
     2221 tcatccccat gccgcgctgc tatttctcga ctacattcat tccaaggaag ggcagcaggt
     2281 cgccatgaaa ggcgggctca gctcgccacg aagcgatatc gggtcgttgg agcaaaagtt
     2341 caaaaaactc tacctcgaaa gcaaatacac gcccgaagaa tatgagaaaa aaatgaacga
     2401 gtgggaggga ctcatgcgca agctgttcat cagcaagcgc tagttgccgc atgagcgcgc
     2461 cgctaaagag ctgccgggcc ttagccattg ccctgtgctg ggtggcaatg gcgtcggggt
     2521 atggcgcgca agccgccgag aaatccgcga aaccggcggt caaagtccgc attagccagt
     2581 cggcggtaag cgcgcgctcg acaattctgt ggagcgccca agatctcggc ctgttcgcca
     2641 agcatggcgt cgaagccgag gtcctctatc tgcgcagcag cccgatccaa atgaccgcgc
     2701 tcggcaccgg cgaagtgcag ttcgccgcca gcggcggctc cccggtgctc ggcgctgcgg
     2761 cagccgggca ggatatcaag atcatcgcta gtccgagcaa ccggttgtcc tacgacctgg
     2821 tggt
//
LOCUS       DATIRS010001001         2468 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_863413, whole genome shotgun sequence.
ACCESSION   DATIRS010001001 DATIRS010000000
VERSION     DATIRS010001001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2468)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2468)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2468
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_863413"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(74..1075)
                     /locus_tag="VLM90_12705"
     CDS             complement(74..1075)
                     /locus_tag="VLM90_12705"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ13879.1"
                     /translation="MKFGIFIFGDNHPELGRSNQKYYDEVLTMAEWAEELGFDSYWLG
                     EHHLYWYGTCVSPPMLIAALGQRTKRIRLGPAIAVPSFHNPLIIAEEYALADNLCNGR
                     LEFALGSGFSPVEFEQFGMSMEEAKEKFWEGTEIIFKAWSQEKFSHHGKHYNFDNISL
                     YMQPLQKPMPPTWLAASSDETLIKAGQMGLPMMGIPFARSQNLADVKAKNDLYAKSLA
                     KAGHSGKPNIMVAMHFYLHQNEQAAVAGARPYFERAISFHKTHRRPGSKIPQFDNIKQ
                     EHLALFTTPQDTVAILREYEKIGVTHVIAMVNFGGVPMGDVRRTLELMSQEVFPKFK"
     gene            complement(1149..2333)
                     /locus_tag="VLM90_12710"
     CDS             complement(1149..2333)
                     /locus_tag="VLM90_12710"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ13880.1"
                     /translation="MTAANLPSLWTSTFTLLCIVQSLGYAQQAMLNPSIPLYITQLGG
                     SPFVVGLTISSFAATSVIARPFIGYWSDRWSECGVLAFGLLMLAASMLLCFFPIVSMV
                     LLANALRGIGWAGVNAGGYALLARIAPASRRGEASGYYSGAQSTPTVLFPAVALWLLH
                     APFGGYNLVFTIMIALGLAGAGVCYFMSRQVPTVEHQAESKSASLPWWRQIFSVAEQG
                     VLLPAALMFCNQLSFPATTSFIVLYAREIGIDAIGSYFVVSGITSVLARPLLGRVSDR
                     IGIGYSLVATFTLQSLALILLVAASNLATILCAGVLYMLGMAIGGSATLIIAMKRATP
                     ERRGRFMASFSIAYPLGYGVGAFITGSAVDMVGYAWTYVLLAVLGSSGLALTILNWRK
                     LE"
BASE COUNT          551 a          664 c          773 g          480 t
ORIGIN      
        1 cggtcgatcg aggtgaatag tcatgtcaaa aaataagtgc ctgcgattaa gtggcactcg
       61 cctgaagcaa agttcatttg aactttggga agacttcctg cgacattagc tccagggttc
      121 ggcgcacgtc gcccatcggc acgccgccaa agttgaccat ggcgatgaca tgggtgacgc
      181 cgatcttttc gtattcgcgc agaatggcga cggtatcttg cggcgttgtg aacagcgcca
      241 ggtgttcttg cttgatgttg tcgaattgcg gaatcttcga gccggggcgg cggtgggttt
      301 tgtgaaagga gatggcgcgc tcgaagtagg gccgcgcgcc ggcgaccgcg gcttgttcgt
      361 tctggtgcag atagaaatgc atggcgacca tgatgttcgg cttgccgcta tggcccgctt
      421 tggctaatga cttggcatag agatcgttct tcgcctttac gtcggcgagg ttctgcgagc
      481 gggcgaatgg aatgcccatc atcggtaggc ccatctggcc ggctttgatc aaggtctcgt
      541 cgctggaggc ggcgagccaa gtcggcggca tgggcttttg cagcggctgc atatagagcg
      601 agatgttgtc gaagttgtaa tgcttgccgt ggtgcgagaa cttttcctgt gaccacgcct
      661 tgaatataat ctccgtgcct tcccagaatt tttctttggc ttcctccatc gacatgccaa
      721 attgctcgaa ctccaccggc gagaagccgc tgccgagggc gaattccagg cgtccgttgc
      781 acaggttgtc ggccagcgcg tactcttcgg cgatgataag cggattgtga aacgacggca
      841 cggcgatggc cgggccgagg cgaatccgtt tggtgcgctg cccgagagcg gcgatgagca
      901 tcggcggcga gacgcaggtg ccgtaccagt agagatgatg ctcgccgagc cagtacgaat
      961 cgaagcccaa ctcttcggcc cattcggcca tggtcaaaac ttcgtcgtaa tatttctgat
     1021 tggagcggcc gagctcggga tggttgtcgc cgaagataaa gatgccgaat ttcaccgcaa
     1081 gctcctcttt tcgatttgac ccactccctc ttaacgtaaa ctagaaaggg cgacaagcgc
     1141 tggtcgattt attccaactt tcgccaattg aggatagtca gcgccagtcc tgaacttccg
     1201 agcacggcga gcaaaacgta agtccaagcg tagccgacca tgtcgacggc actaccggtg
     1261 ataaacgcgc cgacgccata gccgagcggg taggcgatcg aaaatgatgc catgaagcgg
     1321 ccgcgccgct cgggcgtggc tcgcttcatc gcgatgatca gcgttgccga gccgccgatc
     1381 gccatgccga gcatgtagag cacgcccgcg cacaagatcg tcgcgaggtt tgacgcagcg
     1441 actaataata tgagggcgag ggactgaagg gtgaaagtcg cgactagaga atagccgatg
     1501 ccgatgcgat cggagacgcg gccgagcaat gggcgggcga gcacgctggt gatgccgctg
     1561 acgacgaaat aggaaccgat ggcgtctatg ccgatctcgc gggcataaag cacgatgaaa
     1621 ctggtggtcg ccgggaaact cagctgattg cagaacatca aggccgccgg caataacacc
     1681 ccctgttccg ccacgctgaa gatttgccgc caccagggga gcgacgctga ttttgattcg
     1741 gcctgatgct cgacggtcgg aacctgacgg gacatgaaat agcaaacgcc ggctccggcg
     1801 aggcccaaag cgatcatgat ggtaaagacc aaattgtatc cgccaaaagg cgcgtgcaac
     1861 aaccacagcg cgacggcggg aaaaagcacc gtcggcgtcg attgcgcgcc gctgtaatat
     1921 cccgacgcct cgccgcggcg cgatgccggc gcgatgcgcg ccaagagagc gtagccgccg
     1981 gcgttgaccc cggcccagcc gatgccgcgc aaggcgttgg cgagcaggac catgctgacg
     2041 atggggaaaa agcacagcag catgctcgcc gctaacatga gcaggccgaa cgccaacacg
     2101 ccgcactcgc tccagcggtc cgaccagtaa ccgataaagg gccgggcgat cacgctggtc
     2161 gcggcaaacg aggagatcgt caatccgacc acgaagggcg aaccgcccaa ttgggtgatg
     2221 tagagcggga tcgacgggtt gagcatggcc tgctgcgcgt agcccaacga ctggactatg
     2281 cacagcagtg taaacgtcga ggtccagaga gatgggagat tagcggcggt catggcgatt
     2341 gtgatttttg tgcgaatgaa tttgttcacc acgaaggcac gaagagcacg aaggtcggag
     2401 tttaaattat ccgaaccctt cgtgtctcct tcgaaaatac atggcatggg tttgtaggat
     2461 gtggtgac
//
LOCUS       DATIRS010001002         2674 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1650246, whole genome shotgun sequence.
ACCESSION   DATIRS010001002 DATIRS010000000
VERSION     DATIRS010001002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2674
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1650246"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..428
                     /locus_tag="VLM90_12715"
     CDS             <1..428
                     /locus_tag="VLM90_12715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13881.1"
                     /translation="LIMKKQGFTELAVLADLGAWPWAGYSTSDAQLTNRRDKLKRWTR
                     DMVKSLQLMQTRPEEAYKIAQAEFKHPRDITEGAANICIKAIDAQNPGGATDDAMRKN
                     IDLTINQPLKLPASPPLAQLVDFSLLREVHKELGIAGRK"
     gene            425..1492
                     /locus_tag="VLM90_12720"
     CDS             425..1492
                     /locus_tag="VLM90_12720"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ13882.1"
                     /translation="MKLRIFPALPLVVALLLIPLESPGQSLDAKLAVLEKLPAAERQQ
                     KLLEGAKAEGEAVIYANMDVSATKPLTDGFMKRNPGVKATSVHISGAGIITRVEAEAR
                     AGRSLSDVVLSGQLGVLALLERKIFGRYRSPERDHYRDGYKDKDGLWTAYMNNVMVSV
                     YNTRQVKKDEAPRALEDLLKPRWKNKLAMDSQSYVWFGTILQYLGEEAGLRFMKRLNE
                     QNLSHQRGRRLMSQLVAAGEFDMAVETNLNSVLSLSRQGAPLWFAPAPPFFLTPSLLF
                     VNASAPHPFAGALFTDYLLSEEGQKIIVSTNRMPAHTKVKSPESQLIEGQDVRMPDIF
                     DIGRRYQAIGNRYRETFPGAR"
     gene            1621..2601
                     /locus_tag="VLM90_12725"
     CDS             1621..2601
                     /locus_tag="VLM90_12725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13883.1"
                     /translation="MSNKTKITLGLPDHPRCQAIIDGTVGIEGYELAVDPNFVSSGER
                     HYKYLHGEWDVGEVSAASLLRAIEKGQELLAIPVFFERGPRQRNIYHCEQHLKHPSEL
                     KGKKFGCFRYGATAVVWARGYLLDAHGIKTTDMQWFVSGREVFIGHELPVKVQRIDPP
                     PPFGGEKLVLSKMLNEGELHGAVVPGDNGYAGFFGGGETPPMMAAYAGVKPLFDNNQE
                     IVDYVKKTGINPIMHVLSIRKEVVARHPDLPAKLTRAFMEARDASTQYMPAEEIAGYQ
                     RERDVLGEDPYEYVMGENEKRTLAAMNRYQIEQGLMKTMLPMDDLFIGHV"
BASE COUNT          639 a          801 c          725 g          509 t
ORIGIN      
        1 cgctcatcat gaagaagcag ggttttaccg aacttgcagt cttagccgac ctcggcgcct
       61 ggccctgggc tggctattcg acctcggatg cgcagttgac caaccggcgc gacaagctca
      121 aacgctggac ccgggacatg gtgaaaagcc tgcaactcat gcaaacccgt ccggaggagg
      181 cctacaaaat cgcccaggcc gaattcaaac atccgcgcga catcaccgag ggcgcagcga
      241 atatttgcat caaagccatc gacgcacaga accccggcgg cgccaccgac gacgccatgc
      301 gcaagaatat tgatttaacc atcaaccagc cgttaaagct tccggctagc ccgccactgg
      361 cgcagctggt cgacttttcc ttgctgcggg aagttcacaa agaactcggc atagcggggc
      421 gaaaatgaaa ttgcgaattt ttccggcgct accgctggtt gtagcacttt tactgatacc
      481 actcgaatca cccgggcaga gcctcgatgc caagctcgcc gtgttggaga aactaccggc
      541 ggcggaacgc cagcagaaat tactggaggg cgccaaggcc gaaggcgaag cggtcattta
      601 cgctaacatg gatgtcagcg ccacgaagcc gctcaccgac ggcttcatga aacgcaatcc
      661 cggtgttaaa gccaccagcg tgcatatttc cggcgcgggg atcatcaccc gggtcgaagc
      721 ggaagcccgc gcgggacgct cgctctccga tgtcgtcctc agcggccaac tcggcgtgct
      781 cgccttgctc gaaagaaaaa tcttcggccg ctaccgttcg ccggagcgcg accattaccg
      841 cgatggctac aaggacaaag acggcctgtg gaccgcctac atgaacaacg tcatggtcag
      901 cgtctacaac acccgtcagg taaaaaagga cgaagcgccg cgggccctcg aagatctgct
      961 gaaaccccgt tggaagaaca agctggcgat ggacagccag tcctacgtct ggttcggaac
     1021 aattttacaa tacttgggcg aagaagccgg tttacggttt atgaagcgct taaacgagca
     1081 aaacctgtcg caccagcgcg gccgccggct aatgagccaa ctggtcgccg ccggcgaatt
     1141 cgacatggcc gtcgaaacca atttgaactc ggttttgagc ctgagccgtc aaggcgcgcc
     1201 gctctggttc gccccggcgc cgcccttttt cctgacgccg agcttgctgt ttgtcaacgc
     1261 cagcgcgccc catcccttcg ccggcgcttt gttcaccgac tatttgctct cagaagaagg
     1321 ccaaaaaatt atcgtcagca ccaatcgcat gcccgcgcac accaaagtta agtctcccga
     1381 aagccagctg atcgaaggcc aggacgtgcg catgccggat attttcgata taggaagacg
     1441 ctatcaagcg atcggcaacc ggtatagaga gacgttcccc ggcgcgcggt agcaccggtg
     1501 gttcaaatcg ttcaaacagt tcaagccgtt caaaccgtcg gaaacacgtt ttgaactttt
     1561 tgagcggctt gaacattttg aacgatacgt aggcaaagga atgcagaaag gacttttcag
     1621 atgagcaata aaacaaagat tactttaggc ctccccgatc acccacgctg ccaggcgatc
     1681 atcgacggca cagtcggcat cgaaggttac gagctcgccg tcgatcccaa cttcgtctca
     1741 tccggcgagc gccattacaa atatctccac ggcgaatggg atgtcggcga agtctcggcg
     1801 gcgagtttgc tgcgcgccat cgaaaagggt caagagctgc tggcgatacc ggttttcttc
     1861 gagcgcggcc cgcgccagcg caatatttat cactgcgaac aacacctaaa gcacccgtcc
     1921 gagctcaagg gcaaaaaatt cggctgcttc cgttacggcg ccaccgcggt ggtctgggcg
     1981 cgcggttact tgctcgacgc ccatggcatc aagaccaccg acatgcagtg gttcgtctcc
     2041 ggccgcgaag tgttcatcgg ccatgagctg ccggtcaaag tccaacgcat cgatccgcca
     2101 ccgcccttcg gcggcgagaa gctggtgctg tcgaaaatgt taaatgaagg cgaactgcat
     2161 ggcgccgtag tgccgggcga caatggttat gccggatttt tcggcggcgg tgagaccccg
     2221 ccaatgatgg ccgcctatgc cggcgtgaaa ccgctattcg ataacaacca agagatcgtc
     2281 gactacgtca aaaagaccgg catcaacccg atcatgcatg tcctgtcgat ccgcaaggaa
     2341 gtcgtcgcgc gccaccccga cctgccggcg aaactgaccc gagcctttat ggaagcgcgc
     2401 gatgcttcga cccagtacat gccggcggaa gaaatcgccg gttatcaaag agaacgcgac
     2461 gtgctcggcg aagatcccta cgaatacgtc atgggtgaga acgaaaagcg caccctcgcg
     2521 gcgatgaacc gctaccagat cgagcaaggc ttgatgaaaa ccatgctgcc tatggacgat
     2581 cttttcatcg gtcatgtcta aaccaggaag cgtaacgatg ctgcgatcgc tatttgtcgt
     2641 attcgtctta tccctcctat cttctttcgc tggc
//
LOCUS       DATIRS010001003         1671 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1257226, whole genome shotgun sequence.
ACCESSION   DATIRS010001003 DATIRS010000000
VERSION     DATIRS010001003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1671)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1671)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1671
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1257226"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..445
                     /locus_tag="VLM90_12730"
     CDS             <1..445
                     /locus_tag="VLM90_12730"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HemK/PrmC family methyltransferase"
                     /protein_id="HSQ13884.1"
                     /translation="DVSTAAVAIARGNAERNGVSDKIKFLHGDLFAPIDAEAGEFALI
                     VANPPYIRGDEVAGLAPEVSRWEPREALDGGVDGLDFYGRIAARASSYLALHGAVVLE
                     IGSDMGEAVARMFDANGRYQSAKIFQDYAGRDRVVVAQKLRQMTG"
     gene            464..>1671
                     /gene="murA"
                     /locus_tag="VLM90_12735"
     CDS             464..>1671
                     /gene="murA"
                     /locus_tag="VLM90_12735"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR01072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HSQ13885.1"
                     /translation="MDSIIIQGGKKLSGEVTVSGAKNAALPVLISSLLTAEPCTYQRV
                     PHLADIRTTLKLLAGFGGKVDNKNWLGGANDLTLQADRIHKFEAPYDLVRTMRASFLV
                     LGPLVARFGQARVSTPGGCAIGARPINLHLKGLEALGAAIEQTHGYIEATATQLRGAK
                     IYLDLPSVGATENLMMAATLAEGTTMIENAAKEPEINDLADALNEMGASVKGAGSDVI
                     QIDGVDTLHGTNHRIIPDRIEAGSFVIAAAVSGGDVLIRDVRADHLEAFLVKLKETGV
                     LVTTEDNSIRVQRPGKIKSVDVTTLPYPGFPTDLQAQMMVLMAVADGVSVITETIFEN
                     RFMHAHELDRMGAQIKLEGNRAVVRGVRELSGAPVMASDLRASVALVLAGLVANGTTE
                     VSRVYHLDRG"
BASE COUNT          327 a          438 c          554 g          352 t
ORIGIN      
        1 agacgtttct accgcagccg tggcaatcgc gcgcggcaac gccgagcgta acggggtgtc
       61 ggataaaata aaatttcttc acggcgatct tttcgcgccg attgacgcgg aggcggggga
      121 atttgctttg atcgttgcca atccgcctta cattcgtggc gatgaggttg ccggtttggc
      181 accggaggtg agccgctggg aacctcgcga ggcattggac ggcggcgtgg acggtcttga
      241 tttttacggc cgaattgctg ctcgggcttc gtcctatttg gcgttgcacg gtgcggttgt
      301 gctggaaatt ggttcggata tgggcgaggc ggtggcgaga atgttcgacg ccaacggccg
      361 ttaccagagc gccaagattt ttcaggatta cgccgggcga gatagggtgg ttgtcgcgca
      421 aaagcttcgg cagatgacgg gctgaatcaa agggagtcgg tgcgtggatt cgatcatcat
      481 ccaaggggga aaaaaactat cgggtgaggt gacggttagc ggcgcaaaaa atgccgcctt
      541 gccggtgctg atttcgtctt tgttgaccgc cgagccttgc acctatcaac gcgtgccgca
      601 cttggcggat attcggacga cacttaaatt gctcgctggt tttggcggga aagtcgacaa
      661 caagaactgg ctcggcggcg ccaatgatct cacgttgcag gctgatcgca tccacaaatt
      721 cgaagcgccc tacgatctgg taagaaccat gcgggcgtct tttttggtgc tcgggccgtt
      781 ggtggcccgg tttggccagg cgcgggtctc gacgcccggc ggttgcgcta tcggcgcgcg
      841 gccgatcaat ctccatctca agggcttaga ggctctgggc gcggccatcg agcagactca
      901 tggttatatt gaggctaccg cgacgcaact tcgcggcgcg aaaatctacc tcgatctgcc
      961 gtccgtcggc gctacggaga atctcatgat ggcggcgacc ctggccgagg gcacgacgat
     1021 gattgagaac gcggccaagg agcccgagat caacgatctg gccgacgcgc tcaacgaaat
     1081 gggcgccagc gtaaaaggcg cgggcagcga tgtcattcaa atcgacggag tcgatacttt
     1141 gcacgggacg aatcaccgga tcattcccga ccgcatcgag gccggcagct tcgtcatcgc
     1201 ggcggcagta tccggcgggg atgtattgat tcgcgacgtg cgggcggatc atctcgaggc
     1261 gtttttggtc aagctcaaag aaaccggcgt gttggtcacg accgaggata atagcatccg
     1321 cgtgcagcgc cccgggaaaa tcaaaagtgt cgatgttacg accttgccgt accccgggtt
     1381 tcccaccgat ctgcaagcgc agatgatggt gctgatggcc gtggccgacg gcgtgagcgt
     1441 gatcactgag acgatttttg aaaatcgctt catgcacgct catgaactgg accgtatggg
     1501 ggcgcagatc aagctcgagg gcaatcgcgc cgtggtgcgc ggcgtgcgcg agttgtccgg
     1561 cgcgccggtc atggcgagcg atttgcgcgc gagcgtcgct ttggtgctcg cgggtctggt
     1621 ggcgaacggt actacggaag tgtcacgcgt ttaccatttg gaccgcggct a
//
LOCUS       DATIRS010001004         1571 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_765253, whole genome shotgun sequence.
ACCESSION   DATIRS010001004 DATIRS010000000
VERSION     DATIRS010001004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_765253"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..573)
                     /locus_tag="VLM90_12740"
     CDS             complement(<1..573)
                     /locus_tag="VLM90_12740"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13886.1"
                     /translation="MTLIASGGELPAQALIKVPFPYSPINSSSLPWMIAKDAKLFEKH
                     GLDVDLVYFGASSLILQTMLSGSANYAGFAGPAIISNVLNGGDVITIGALTPMSISLL
                     TRASIEKGEDLRGKKVGISRLGAVPHLAIQLILDKFAIKDATILQMGGQPEAAAALRR
                     GIVDGAMVSAPLSFQLVKEGFRELIGTPEYQ"
     gene            complement(645..800)
                     /locus_tag="VLM90_12745"
     CDS             complement(645..800)
                     /locus_tag="VLM90_12745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13887.1"
                     /translation="MNIMAKAGEFVNRKGVYPPVPDADKIKFVEMDDLGESFYAEKRK
                     EFQKLFR"
     gene            complement(797..>1571)
                     /locus_tag="VLM90_12750"
     CDS             complement(797..>1571)
                     /locus_tag="VLM90_12750"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ13888.1"
                     /translation="LIEAAKKDGNLIVYGTMQSDIFELLQKSFHKKTGIAIDYWLTSA
                     TKVMDRALSEARAGKALFDLVMSTEDTHRIMLKEGILAKYESPMIKDFPKEAIDPQLG
                     ARARNHIVGVMYNKNVIKPADAPKTLEDLVKPQYRGKLVMADPTLHTTTAQWLANLHK
                     LMGKDKADKFIRDLAAMKPVLVESFAPSADRVTTGETPIGITYVYYVFLNGQKGAPVD
                     YVRGDYRLLGDASYMSIFHKAPHPSAAKAFIDFSSTTRA"
BASE COUNT          315 a          422 c          466 g          368 t
ORIGIN      
        1 ctggtactcc ggtgtgccga tcaactcgcg aaaaccctct ttgacaagct gaaacgatag
       61 tggcgccgaa accatagccc cgtcgacgat tccccttcgt agcgcggccg ctgcttcggg
      121 ctgtccgccc atttgtagaa tagtcgcgtc tttgatcgcg aatttatcca ggatcaactg
      181 aatcgctaag tgcggcaccg cgccgaggcg gctgatgccg accttcttgc cgcgcaggtc
      241 ttcgcccttt tcgatggacg cccgggtgag cagcgaaata ctcatcggcg tgagagcgcc
      301 tatggtaatc acgtcgccgc cgttgagcac gttggagatg atcgccggtc cggcaaagcc
      361 ggcgtagttg gccgagcccg acagcatcgt ctggagaatc agcgacgaag cgccgaagta
      421 gaccaagtcg acatcgagcc catgcttctc aaacagcttg gcatccttgg cgatcatcca
      481 aggtaaactg cttgagttga tcggcgagta agggaagggg accttgatta gggcttgcgc
      541 gggcaattca ccgccactcg caatcaaagt cacgagcacg agcacgaaga cgaatacgaa
      601 attagagtgt tggagtaatc gggtgctggg tcggatcatc ataattagcg aaatagcttc
      661 tggaactctt tgcgtttctc ggcgtagaaa gactcgccga gatcgtccat ctcgacgaac
      721 ttgatcttgt ccgcatcggg caccggcggg tagacgcctt tgcggttaac gaactcgccg
      781 gccttggcca tgatgttcat gctctcgtcg tcgaggaaaa gtcgatgaaa gctttggctg
      841 cgctcggatg gggcgccttg tggaagatcg acatgtagct ggcgtcgccc aagagccggt
      901 agtcgccgcg gacgtagtcg actggcgcgc ctttctggcc gttcaagaaa acataataaa
      961 cgtaagttat gccgatgggc gtctcgccgg tggtgacgcg gtcggcggag ggagcgaagg
     1021 attccaccag caccggcttc atcgcggcca ggtcgcggat gaacttatcc gctttgtctt
     1081 tgcccataag tttatgcaag ttcgccagcc actgagctgt cgtggtgtgc agcgtcgggt
     1141 cggccatgac gagtttgccg cggtattgcg gcttgactag atcttctaaa gttttcggcg
     1201 cgtcggcggg cttgatgaca ttcttgttgt acatgacgcc gacgatgtga ttacgcgccc
     1261 gcgctcccaa ctgcgggtcg atcgcttctt tgggaaagtc tttgatcatc ggcgattcat
     1321 acttcgccag aatgccttcc ttgagcatga tccggtgcgt gtcttccgtc gacatgacca
     1381 gatcgaagag cgccttgccg gcgcgcgctt cgctgagcgc gcggtccatt actttggtcg
     1441 ccgaagtgag ccagtagtcg atggcgatgc cggttttctt gtgaaacgat ttttgcagca
     1501 gctcgaaaat atccgattgc atggtgccgt agacgatcag attgccgtct ttttttgctg
     1561 cttcgatgag c
//
LOCUS       DATIRS010001005         2740 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1159099, whole genome shotgun sequence.
ACCESSION   DATIRS010001005 DATIRS010000000
VERSION     DATIRS010001005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2740
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1159099"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..992
                     /locus_tag="VLM90_12755"
     CDS             <1..992
                     /locus_tag="VLM90_12755"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ13889.1"
                     /translation="TVMVHAQQDKAAIDKLYSAAKKEGRVVIWGPTDGVVYEKMQELL
                     DKQYPGIKIESFESIPEPLVQRIIAENQAGKPAAVDIIQSGSLRALRPLIDRDLLASY
                     PGWEKDFGLDAVYANHRFVGAYNLALPIAYNSKAVSAKDAPKSWEDLAEPKWRGKKII
                     IEARLVPFAMLGTEWGKEKAMDLVKKILAQQPIIVQGGTTVANALAGGQVSIAVGTYA
                     FTIEGLKKRGAAVDWVAPSPLPVLTSAEGVLKTAPHPNAGRFFAGWMGTAEAQKIRYA
                     IRGQSMEVGRNAIGNVGERIRSEKPAIILETEKTFAGILEIQREMGKLLGALR"
     gene            1172..>2740
                     /locus_tag="VLM90_12760"
     CDS             1172..>2740
                     /locus_tag="VLM90_12760"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HSQ13890.1"
                     /translation="MNFTPTTIAENVKLRPWFSVRKLSFRALTLGLTIGVVSYLVVVP
                     LFMLLYASVKSTEDKLPFESTVITLSNYAAVLTSPATLPIFLNTMLFTVGSLAVGLPL
                     AILLAWLCERTAIPGRSWIAALILVPMTIPSLLSAIAWIQLLDPRNGLINVVLRGVFG
                     VASDIGPFDIYTIYGMCFVQGLRLVPSAYLMIAASFRAMDPSLEEQSAMAGRGVAQTT
                     MRVTLPIMRPALLAALIYFIIVVIESFDIPGLLGFTARIRVLSTAIYWATHSEVGLPD
                     YGLASALGTIILFAALLLMWGYQRLTAHQERFATITGKGYRPRQVGLGIWSVPATAFC
                     TIYVLIAVLLPFLMLLWTSVQPFYSTPSMESLARVSFEGYANIWNDGSVVRAIWNTAQ
                     LALVTAVATIVLALLVSWFVVRRRRGDNGVANYLATVSFLPQCVPSIVIGLAFIFVYV
                     RFPIPIYGTLWIIALAMTTRYLAYSSRATTSALMQVHGELEEASQMAGAPWTRTIRRI
                     TVPLLAPALINVFFW"
BASE COUNT          512 a          785 c          823 g          620 t
ORIGIN      
        1 cgactgtaat ggtccacgcc caacaggaca aagcggcgat cgataagctt tacagtgcgg
       61 cgaagaaaga gggcagggta gtcatctggg gacccaccga cggcgtcgtt tatgaaaaaa
      121 tgcaggaatt gctcgacaaa caatatccgg gcatcaagat cgagtccttc gaaagcattc
      181 ccgagccctt ggtgcagcgc atcatcgccg aaaaccaggc gggcaagccg gcggcggtcg
      241 atatcatcca gtccggctcg ctgcgcgcgc tgcggccgtt gatcgatcgc gatttgttag
      301 cttcctatcc aggctgggaa aaagactttg gcttagatgc cgtgtatgcc aaccatcgat
      361 tcgtcggcgc ctataatcta gcactaccga tcgcttacaa ttcaaaagcg gtcagcgcta
      421 aggacgcgcc gaaaagctgg gaagatctcg ccgagccgaa gtggaggggc aagaaaataa
      481 ttatcgaggc ccggctggtg ccgttcgcca tgctcggcac ggagtggggt aaagaaaagg
      541 cgatggattt ggtcaagaaa attctcgccc agcaaccgat catcgtgcaa ggcggcacga
      601 ctgtcgccaa tgcgctcgcc ggcgggcaag tctcgattgc cgtcggcacc tacgctttta
      661 cgatagaagg gttgaaaaaa cgcggcgccg cggttgactg ggtcgcgccg tcgccgctac
      721 ccgtcctgac ctcggcagag ggcgttctca agaccgcgcc ccatcccaac gcggggcgtt
      781 tcttcgcggg ttggatgggc actgccgagg cgcagaagat tcgctacgcg attcgaggac
      841 aatccatgga ggtcgggaga aacgccatcg gcaacgtggg cgaacggatc aggagcgaga
      901 aaccggcgat tatcttggaa accgaaaaga cttttgccgg tatcctggag attcaacgag
      961 agatgggcaa attgctcggc gcgctaaggt gaaaatggcg tgatgctatt gtcgagaatg
     1021 ttactcgtcg ctagcgggta cttcgtgggc ctgaaccgaa gcgcgggatc ttgcatgcgg
     1081 ccgagtttgt tcaccggcgg ttcagacgga ttcaagagcg gggtagtctg cgccaaccga
     1141 acctagcgat catcaatcat ttgcatcgcc gatgaatttt acgcccacca cgatcgccga
     1201 gaacgtgaag ctgagacctt ggttttcggt tcggaaatta tcgtttcgcg ccctcaccct
     1261 tggtttgacg atcggtgtcg tttcttatct cgttgtcgtg ccgctgttca tgttgctcta
     1321 cgccagcgtt aagagcaccg aagacaagct gcctttcgag tcgacggtca tcacgctgtc
     1381 caattacgcc gccgtgctga ccagcccggc gacgctgccg atctttctga acacgatgct
     1441 gttcaccgtg gggtcgttgg cggtgggcct gcccctggcg attttattgg cttggctatg
     1501 cgaacgcacg gcgattccgg gacgcagctg gattgccgct ttgattctcg tgccgatgac
     1561 gattccttcg ctgctttcgg cgatcgcctg gatccagctc ctcgatccac gcaatgggct
     1621 catcaatgtt gtgctccgcg gcgtgttcgg cgtggcgtcg gacatcggcc ccttcgatat
     1681 ctatacgatt tacggcatgt gtttcgtcca ggggctgcgg ctggtgccgt cggcctatct
     1741 gatgatcgcg gcgtcctttc gcgccatgga cccgtccttg gaagagcaga gcgccatggc
     1801 cggacgcggc gtcgcccaga ccaccatgcg cgtgaccttg ccgatcatgc ggccggcgct
     1861 gctcgccgcg ctgatttatt tcataatcgt cgtcatcgag tcgttcgata ttcccggcct
     1921 gctcggtttc accgcgcgca ttcgcgtgct cagcacggcg atttattggg cgacccactc
     1981 ggaagtgggg ctgcccgatt acggtttggc gtcggctctg ggaacgatca ttcttttcgc
     2041 ggctttgctg ctcatgtggg gctatcagcg cttgaccgcg caccaggagc gcttcgccac
     2101 gatcaccggc aagggctatc gaccgcgcca ggttggtctc ggtatctggt cggtgccggc
     2161 cactgccttc tgcacaatct atgtcttgat cgcagtgtta ttgccgtttc tcatgttgct
     2221 gtggaccagc gtgcagccgt tttactccac cccatccatg gaatcgctgg cgcgagtgag
     2281 ctttgaaggc tacgccaata tctggaatga cggcagcgtc gtgcgcgcca tctggaatac
     2341 cgcgcagctc gctctggtta ctgcggtggc gaccatcgtg ctcgccttgc tggtcagttg
     2401 gttcgtggtg cggcgccggc gcggtgacaa cggcgtggcc aattatttgg cgacggtatc
     2461 gtttttaccg caatgcgtgc cgagcatcgt catcggcctc gcgtttatct tcgtctatgt
     2521 gcggttcccg atcccaatct acggtacgct gtggatcatc gctttggcga tgaccacacg
     2581 ctatctcgct tacagttcgc gggccaccac ttcggcgctc atgcaggttc acggcgagct
     2641 cgaagaggcg tcgcaaatgg ccggcgcgcc atggacgcgc accatccggc gaatcaccgt
     2701 gccgcttttg gcgccggcat tgatcaacgt gtttttctgg
//
LOCUS       DATIRS010001006         2772 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1453722, whole genome shotgun sequence.
ACCESSION   DATIRS010001006 DATIRS010000000
VERSION     DATIRS010001006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2772)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2772)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2772
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1453722"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(208..1314)
                     /locus_tag="VLM90_12765"
     CDS             complement(208..1314)
                     /locus_tag="VLM90_12765"
                     /inference="COORDINATES: protein motif:HMM:NF024091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSQ13891.1"
                     /translation="MMFSGLWAILKKELIHIKRDPATRFIFAIPLFELLLFGYAIDTD
                     VKHVPTVVFDLNRQLASRQLVQEFENTHYFRLVGEVQSDQELQDAIIGGRAKVGIKIP
                     PDYSTNLVNGRQGQVQVIIDGSDSTIATRVLNASQQLGFVKSLERDGISTSQFSIDIR
                     PRLLFNPNLLSANFYVPGLIGIILQLVTVFLTAFAIVREREHGTLEQLLVTPVSKGGL
                     ILGKLLPYTAIGFGQTVLELLLMVFLFGVPIHGSVALLLFLSMVFLVPALGMGIVIST
                     FARNQSEAMQMSLMTLLPAFLLSGFVFPRESMPLVIYLISFLIPATYYLEILRGIILR
                     GAGIAALWDEALVLVAFGVLFMFLSVVRFKKHLG"
     gene            complement(1311..2264)
                     /locus_tag="VLM90_12770"
     CDS             complement(1311..2264)
                     /locus_tag="VLM90_12770"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ13892.1"
                     /translation="MSIAIRADAISKKFGALTAVSDVSFTIEEGEIFGFLGPNGSGKS
                     TMIRILCGLLQPTSGRAELDGLDVVKQTEEIKKRIGYMSQRFSLYEDLTVEENIDFYG
                     AIYGLNRAELAARRQAVVALAGLDDRLEQMAATLSGGYKQRLALACSLLHHPKILFLD
                     EPTAGIDPVARREIWDLLFRLAAEGTTLFVTTHYMDEAERCSQVAYIYLAKLIAIGRP
                     QDLKRLPEITPAGCAWVEVTSDDATQLLPLLRRHDDVVDATIFGEAIHALVRQSTDAA
                     ALIEFARQQAGLNVACRSVPPSLEDVFVALTRMRRSATEGR"
     gene            complement(2336..>2772)
                     /locus_tag="VLM90_12775"
     CDS             complement(2336..>2772)
                     /locus_tag="VLM90_12775"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HSQ13893.1"
                     /translation="KSEMEVATAKLEQIQTQLDETVIKAPVDALVEALDLQPGDLIGA
                     GKPVATLLRQGSLWVRAYLPEARLGFVQPGLKVKVRVDSFPNKDFSGAVRRVHRQGEF
                     TPRNIQTHEERVLQVFQVEVVIDDAEHVLRPGMSADVTIQMQ"
BASE COUNT          631 a          850 c          770 g          521 t
ORIGIN      
        1 tccatcgtcg gactattgct ggtcagcgcc gaactgccga cgattttctg gatgttagga
       61 gttctttcgt tcatcagcgt cgccctaatg gcactgctcc tgcctcgcag tgcaaaaatc
      121 ctgccgaccc cgacctatac atcctgacgc ccgtcgccgg gtttgaaatc tggaatctga
      181 aatttgaaat tccgagcaaa gcgaggacta tcccaagtgc ttcttgaagc gcacgacgct
      241 caagaacata aaaagcacgc cgaaggccac cagcaccaac gcctcatccc acagagcggc
      301 aatgccagcg ccgcgaagaa ttatgccgcg gagaatttcc aaataataag tcgccggaat
      361 caagaagctg atcagataaa tcaccagcgg catggactcg cgggggaaga cgaagccgga
      421 tagcagaaac gccggcagca acgtcatcaa ggacatctgc atcgcctcgc tttggttgcg
      481 cgcgaaggtc gaaatcacga tgcccatgcc gagggccggc acaagaaaaa ccatcgacaa
      541 gaacaataac aacgcaaccg aaccgtgaat cggcacgccg aataggaaaa ccatcagcaa
      601 tagctccaaa accgtctggc caaagccgat ggcggtgtag ggtaaaagct tgccgaggat
      661 cagcccgccc ttggacaccg gcgtgaccag caattgctcc agcgtgccgt gctcgcgctc
      721 gcgcactatg gcgaaggcgg tgagaaacac cgtgaccagc tggagaatga tgccgatcaa
      781 gcccggcaca taaaagttgg cgctcaagag attgggattg aacagcaagc gcggccggat
      841 atcgatgctg aactggctgg ttgaaatgcc gtcccgttcc agcgatttga cgaaacccaa
      901 ctgttggctg gcgttgagca cgcgcgtggc gatggtcgag tccgaaccgt cgatgatcac
      961 ttgcacttgc ccctgccggc cgttgaccag attggtcgag tagtccggcg ggattttaat
     1021 gccaactttt gcccgcccgc caatgatcgc gtcttgcaac tcttggtccg actggacttc
     1081 accgaccaaa cgaaagtagt gggtgttctc gaactcctgc accagttggc ggctcgccaa
     1141 ttggcgattg aggtcgaaaa ccaccgtcgg cacatgcttg acgtcggtgt cgatggcgta
     1201 gccgaacaac agcaattcga aaagcgggat ggcgaagata aagcgcgtcg ccggatcgcg
     1261 tttgatgtga atgagctctt ttttgaggat cgcccacagg ccgctaaaca tcatcgccct
     1321 tccgtggcgc tgcggcgcat gcgcgtcaac gcgacaaaaa catcttccag agacggcggc
     1381 acggagcggc acgcgacgtt tagcccagcc tgttggcggg cgaactcgat cagcgccgcc
     1441 gcatcggtgg actggcggac taaggcatgg atcgcctcgc cgaagatggt cgcgtcgacg
     1501 acatcgtcat ggcgccgcaa aagcggtagc agctgggtgg catcgtcgct ggtgacttcg
     1561 acccaggcgc agcccgccgg ggtgatctcg ggcaaccgct tcagatcctg cggccggccg
     1621 atggcgatca gcttggcaag ataaatatag gcgacctgtg agcagcgctc cgcctcgtcc
     1681 atgtaatggg tggttacgaa cagtgtcgtg ccttcggcgg cgaggcgaaa gagcagatcc
     1741 caaatctccc ggcgcgccac cggatcgatg cccgccgtcg gctcgtcgag aaacaagatc
     1801 ttgggatggt gcaagagcga acaagccaac gcgaggcgct gcttatagcc accggacagc
     1861 gtcgccgcca tctgttccaa ccggtcgtcc agaccagcca aagccaccac cgcctgccgc
     1921 cgcgccgcca gctcggcgcg attcaaccca tagatcgcgc cgtaaaaatc gatattctcc
     1981 tcaaccgtga gatcttcgta gagactgaaa cgctgcgaca tgtagccgat gcgcttcttg
     2041 atctcctcgg tctgcttaac gacatcgaga ccgtcgagct cggcccgccc cgaggtcggc
     2101 tgcaacaggc cgcagaggat gcggatcatc gtcgacttgc ccgagccgtt ggggccgagg
     2161 aatccgaaga tctcaccttc ctcgatggta aaactgacat cgctgaccgc cgtcaacgcg
     2221 ccaaatttct tgctgatagc gtcggctcga atggcgatac tcatggatta ttacccgatc
     2281 ttcgacataa cgctcccgct gggcgcgctc tgcgcgggcg attcacgaat cgcccctact
     2341 gcatttgaat cgtcacatcc gcactcatgc ccggacgcag cacatgctcg gcatcgtcga
     2401 tgaccacttc gacctgaaac acttgcagca cccgttcttc gtgggtttga atattgcgcg
     2461 gcgtgaattc tccttgccga tggacgcgcc gcaccgcacc ggagaagtcc ttgttgggaa
     2521 atgaatcgac gcgaactttt actttcaatc ccggctgaac aaaacccaga cgcgcctccg
     2581 gcagataggc gcgcacccaa agacttccct ggcgcaacag cgtcgccacc ggcttgccgg
     2641 cgccgattag atcccccggc tgcaaatcca aagcctcgac cagcgcatcc accggcgctt
     2701 tgatcacggt ctcatcgagt tgcgtctgaa tttgctcgag cttcgccgtc gccacttcca
     2761 tctccgactt gg
//
LOCUS       DATIRS010001007         1747 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_961635, whole genome shotgun sequence.
ACCESSION   DATIRS010001007 DATIRS010000000
VERSION     DATIRS010001007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1747)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1747)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1747
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_961635"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1548)
                     /locus_tag="VLM90_12780"
     CDS             complement(<1..1548)
                     /locus_tag="VLM90_12780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13894.1"
                     /translation="MNQRSDALTVALTGQLPFILVTAALLAFVASLLMLRLYRRSVIK
                     SMRRRGRSDMLDAKGYLPPDPEHNPNEAPLSFNFVAHRQIPVRADADKLYHHARRRRW
                     LAVFIHMLAGACFAAVMTAAFLSAGKMEFLPYRFIYLTWINFWPALIAIDLTLGPSRR
                     SRVSGLLGYFLFGVAVGAVLLSRNAGLPAGQLIYLWLELNAIPTVLLLIFLNRRIRAV
                     GPLMLLFMIVGVIGATFTTSLVGNHPNLLKAVGELSYSIGLSATGTIIGLHLIGFAVL
                     AIVGWLMLELLRRLYESKRISEQSITIDAMWLLFGIVNSIGLVFEGYRWFASGFIAFT
                     IYKIVSGALFALCGMSRRAKENGYRLLLLRVFALGKRSEQLYDSLGKSWRTVGSVQMI
                     AGPDLATTTIEPHEFLDFVSGKLDRRFIDTGGTLDLRIGQMDLAPDRDGQFRVTEFFC
                     HDDTWKMTLARLADDSDAVLMDLRGFSQANAGCVFEIHEIFNLVPLVRAVFAIDKSTD
                     RPFMRETM"
     gene            1547..>1747
                     /locus_tag="VLM90_12785"
     CDS             1547..>1747
                     /locus_tag="VLM90_12785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13895.1"
                     /translation="METGSSLAKINASVADPTERRRKVLSLDYRVKLLLSRLDPESTA
                     KLESPAILEIEKVIRSAAKIAVG"
BASE COUNT          441 a          467 c          526 g          313 t
ORIGIN      
        1 catggtctcg cgcatgaaag gtcgatcggt gctcttgtcg atggcgaaca ccgcccgcac
       61 cagcggcacg aggttgaaaa tctcatggat ctcgaaaacg catccggcat tggcctggga
      121 gaagccgcgc aaatccatca gcaccgcgtc gctatcgtcg gccaagcgcg ccaaagtcat
      181 cttccaggta tcgtcatggc agaagaattc cgtcacgcga aattgtccat cgcggtcagg
      241 cgccaagtcc atctggccga tgcgcaggtc gagtgtgccg ccggtgtcga tgaagcggcg
      301 gtcgagtttg ccgctgacga aatccaaaaa ttcatggggc tcgatggtcg tggtcgccaa
      361 gtccggtccg gcgatcattt ggacgctacc gacggtgcgc caggatttac cgaggctatc
      421 gtagagctgc tcgctgcgtt tgccaagtgc gaacacgcgc agcaatagta gtcggtaacc
      481 attctccttt gcccgccgcg acatgccgca aagagcaaac agcgccccac tgacgatctt
      541 ataaatcgta aaggcgatga aaccgctggc gaaccaccgg taaccttcaa acaccaagcc
      601 aatcgaattg acgatgccga agagcagcca catggcgtcg atggtgatgg attgttcgct
      661 gatgcgttta ctctcgtaga gccggcgcag caattcgagc atcaaccagc caacgatcgc
      721 caagacggcg aagccgatga gatgcagccc gattatcgtg ccggtggcgc tcaagccaat
      781 ggaatagcta agctcgccga ccgccttgag taaattggga tggttgccaa ccaagctcgt
      841 cgtgaaggtc gcgccgataa cgccgacaat catgaacaac aacatcagcg gcccgacggc
      901 acgaatacgg cgattcagaa agatcagcag cagaacggtg gggatggcgt tcaattcgag
      961 ccagagataa atcaactgtc cggcagggag cccggcattc ctcgataaca aaactgcgcc
     1021 gaccgcgacg ccaaacagaa agtagcccaa tagtccagac acgcggctgc gccgcgaagg
     1081 tccaagggtc aggtcaatgg cgatgagcgc gggccagaag ttgatccagg taagatagat
     1141 gaagcggtat ggcaggaatt ccattttgcc cgcggacaaa aatgccgcag tcatcactgc
     1201 cgcgaaacaa gcgccagcga gcatatgaat gaacaccgcg agccaacggc ggcgccgggc
     1261 gtggtgataa agtttgtcgg cgtcggcacg cacggggatt tggcgatggg cgacgaagtt
     1321 gaagctcaat ggcgcttcgt tggggttatg ctcagggtca ggcgggagat aacccttggc
     1381 atcgagcatg tcactgcggc cgcgccggcg catcgatttg atcacgctac gccggtaaag
     1441 gcgcagcatt aatagggatg cgacaaacgc gagaagcgca gcggtgacca ggataaacgg
     1501 cagctgtccg gtcagggcga cggtaagagc gtcggagcgt tgattcatgg agacagggtc
     1561 gagcctcgcg aaaataaatg caagcgtcgc tgacccaacg gagcgtcgta ggaaagttct
     1621 gtcgctggat tatcgcgtaa agctattgtt gtcgcgatta gatccagaaa gtacggcgaa
     1681 actcgaaagc ccggcaatcc ttgagatcga gaaggttatt cgttcggcag caaaaattgc
     1741 agttggt
//
LOCUS       DATIRS010001008         2535 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1847090, whole genome shotgun sequence.
ACCESSION   DATIRS010001008 DATIRS010000000
VERSION     DATIRS010001008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2535
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1847090"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..703
                     /gene="argF"
                     /locus_tag="VLM90_12790"
     CDS             <1..703
                     /gene="argF"
                     /locus_tag="VLM90_12790"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: protein motif:HMM:NF001986.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HSQ13896.1"
                     /translation="LDRWFDLITVRTFGHKIIEELAEYAAVPVINALTDGYHPCQVLA
                     DCQTLIEHKGTLDGLKIAFVGDGNNMVHSWLEAAAILPFAFALACPKGYEPDAAILQK
                     ARDQGAKITITQSVKEAAEGADAIYTDVWTSMGQEKEVQNRLRAFRAYQVNSQVVAMA
                     KPDAVVMHCLPAHRGEEITHEVLESPQCVAFDQAENRLHAQKAVMVWLLKGFKGSRVQ
                     GSMKTTGSRGSKKSK"
     gene            700..1899
                     /locus_tag="VLM90_12795"
     CDS             700..1899
                     /locus_tag="VLM90_12795"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HSQ13897.1"
                     /translation="MNVKKVVLAYSGGLDTSVILRWLIEEYGCEVIAFCADLGQGEDL
                     QAVKKKAMQTGASKVVIGDLREEFVKNYVFPMLRANAVYEGSYLLGTSIARPLIAKGQ
                     IDVAVRERADAVSHGATGKGNDQVRFELTYYALKPGIKVIAPWREWNLNARSTLIDYA
                     RKHGIPVPVTKAKPYSTDRNLFHISYEGGVLEDPWKEAPADMFVWCRPVEKAPNRAEY
                     IEIDYMRGDPVALNGKKLSPANLLARLNDIGAKHGIGRVDVVENRYVGMKSRGVYETP
                     GGTILHGAHRGIESITMDREVLRLRDSLIPRYAEMIYYGYWFAPEREVLQKTIDAAQA
                     NVTGRVRVKLYKGNVMVVGRKSDASLYDTNVATFEADQVYRQADAEGFIRLNALRLRL
                     RKLAKAK"
     gene            1986..>2535
                     /locus_tag="VLM90_12800"
     CDS             1986..>2535
                     /locus_tag="VLM90_12800"
                     /inference="COORDINATES: protein motif:HMM:NF012432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HSQ13898.1"
                     /translation="MNKPKKKLWGGRFSGGTADSVEAFTASIAVDARLYRHDIVGSIA
                     HAKMLGKQRIIPLRDAQKIVRGLAAIEREIENGKFEFSPADEDIHMNIERRLTEKIGS
                     AGGKLHTARSRNDQVALDMRLYLRDEVAAILLLLKTLQRELAKAAKKNLDVIMPGYTH
                     LQRAQPVLLSHHLLAYYDMFERD"
BASE COUNT          572 a          696 c          766 g          501 t
ORIGIN      
        1 tttagaccgc tggtttgatc tgatcacggt acgcacgttt ggccacaaga tcatcgaaga
       61 gttggccgaa tatgccgcgg tgccggtgat caacgcgctc accgatggtt accatccgtg
      121 ccaggtgctt gccgattgcc aaacattaat cgagcataaa ggcacgcttg acggtctgaa
      181 gatcgctttc gtcggcgacg gcaacaacat ggttcattcc tggttggaag ccgccgccat
      241 cttgccgttt gcgttcgccc tggcctgtcc caagggttac gagcctgacg ccgcgatatt
      301 gcagaaggcg cgcgatcaag gggcgaagat cacgatcact caatcggtca aagaggcggc
      361 ggagggtgcc gacgccatct ataccgatgt ttggaccagc atgggccagg aaaaagaggt
      421 gcaaaaccgc ctgcgagcgt ttcgcgcata ccaggtcaat agccaggtgg tcgcgatggc
      481 gaaaccggat gcggtggtca tgcattgcct gccggcgcac cgcggcgagg agatcaccca
      541 cgaagtgctg gaaagcccac agtgcgtcgc cttcgatcaa gcggagaatc gcctgcatgc
      601 gcaaaaagcg gtgatggtct ggctgctaaa agggttcaaa ggttcaaggg ttcaaggttc
      661 aatgaagaca accggaagca gaggttcgaa gaaatccaaa tgaacgttaa gaaagtggtg
      721 ttggcttatt ccggcggttt ggatacgtcg gttattttac gctggctcat agaagaatac
      781 ggctgcgaag tcatcgcctt ctgtgccgac ctgggccagg gcgaagatct ccaggcggtc
      841 aagaaaaaag cgatgcagac gggcgcgagc aaagtcgtga tcggcgatct gcgcgaagag
      901 ttcgttaaaa attacgtatt cccgatgctg cgcgctaacg cggtttacga aggttcctat
      961 ttgctcggca cctccatcgc ccggccgttg attgccaagg ggcagatcga cgtcgccgtg
     1021 cgtgaaagag ccgacgcggt ttcccatggc gccaccggca agggcaacga tcaggtgcgc
     1081 ttcgagctca cttactatgc gctcaagccg ggcatcaaag tcatcgctcc ctggcgcgag
     1141 tggaatttaa atgcgcgctc gaccttgatc gactatgcgc gcaagcatgg catcccggtg
     1201 ccagtcacca aggccaaacc ttacagcacc gatcgcaact tgtttcacat cagttatgaa
     1261 ggcggcgtcc tcgaggatcc gtggaaagaa gcgccggcgg atatgttcgt ctggtgccgg
     1321 ccggtggaga aggcgcccaa ccgcgccgaa tacatcgaga tcgattatat gcgcggcgat
     1381 ccggtggcat tgaacggcaa aaagctctcg ccggcgaatc tgctggcgcg cttgaacgac
     1441 atcggcgcca agcatggcat cggccgggtc gacgtggtcg agaaccgtta tgtcggcatg
     1501 aagtcgcgcg gcgtttatga aactcccggc ggcacgattc tccacggagc ccatcgcggc
     1561 atcgagtcga ttaccatgga ccgcgaggtg ctgcgcttgc gcgattcgct gataccgcgc
     1621 tacgccgaga tgatttatta cggctactgg ttcgcgccgg agcgcgaagt gctgcaaaaa
     1681 accatcgacg ccgcccaggc caacgtcacc ggccgggtgc gggtgaaatt atacaaaggc
     1741 aacgtcatgg tggtcggccg caagtccgac gcctcgctct acgataccaa cgtggcgacg
     1801 ttcgaggccg atcaggttta ccgccaagcc gacgccgagg ggtttattcg attgaatgcg
     1861 ttgcggctgc ggctgcgtaa actagcgaag gcgaagtgaa ttgagaatgg aaaatggaga
     1921 attgataatt tcggactcga tcattttcac ctaccataat caattttcca ttgtctcagg
     1981 ttatcgtgaa taagccgaaa aaaaagctct ggggcggccg gttcagcggt ggcaccgccg
     2041 attccgtcga ggcgtttacc gcgtccatcg ccgtcgatgc gcggctgtac cgccatgaca
     2101 tcgtgggcag catcgcccat gccaagatgc tcggcaagca gcggattatt cccctgcggg
     2161 atgcgcagaa aattgtccgc ggcttggcgg cgatcgagcg tgagattgaa aacggcaagt
     2221 tcgagttctc gccggcggat gaagacattc acatgaacat cgagcgccgg ctgaccgaga
     2281 agatcggcag cgctggcggc aagctgcaca cggcgcgcag ccgcaacgat caggtcgcct
     2341 tggatatgcg gctctatttg cgcgacgagg tggcggcgat ccttctcctg ctcaaaactc
     2401 tgcaacggga gcttgccaag gcggccaaga aaaacctcga tgtcatcatg cctggctaca
     2461 cccatttgca acgggcgcag ccggtgctgc tatcgcatca tttgctggcc tactacgaca
     2521 tgttcgagcg cgacc
//
LOCUS       DATIRS010001009         1881 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_568031, whole genome shotgun sequence.
ACCESSION   DATIRS010001009 DATIRS010000000
VERSION     DATIRS010001009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1881)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1881)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1881
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_568031"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..960)
                     /locus_tag="VLM90_12805"
     CDS             complement(<1..960)
                     /locus_tag="VLM90_12805"
                     /inference="COORDINATES: protein motif:HMM:NF012579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation-transporting P-type ATPase"
                     /protein_id="HSQ13899.1"
                     /translation="MIAERLNSAKIVFGLKGELAGAIDELTARSHIPGLGAQFHACPP
                     DQENERYSYIGAGIAVPHLRIDNLAEPELLLGLAPDGLAFNAHKINIVLLLATPAERP
                     AEHLQLLQRIASLLPAIREELLQQRRPEQIIKVIARAEQQSALPTYINLTQEQIAFEL
                     QTDLVNGLSSAEAQSRLRHYGGNILQRSRRDPWQFKLLRNLFSFFAILLWIAALLCFV
                     PGVDLPQLGIAILTVVLVNGLFAFLQEYKSDRALEMLQQLIAQRSTIIRDGNTQEIAS
                     AALVPGDVIVLEEGDLVPADCRLTEAFEVEVDNSSLTGESTPAR"
     gene            complement(1231..1497)
                     /locus_tag="VLM90_12810"
     CDS             complement(1231..1497)
                     /locus_tag="VLM90_12810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13900.1"
                     /translation="MGGFLGDKEVLTKERVKEILRNKEYNFFEEKVNLLEVRDDSLLL
                     KVSFLIEHRTRMIVIEEKDPIVVPFSDFKVEDWGDGIKKIADIE"
     gene            complement(1566..>1881)
                     /locus_tag="VLM90_12815"
     CDS             complement(1566..>1881)
                     /locus_tag="VLM90_12815"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HSQ13901.1"
                     /translation="RIRHIPIVDGSRLVGIVTERDLIGAAAAQIFGLKHKSKSALLKS
                     VLIKEVMKKRVITVAPDTPIKDVAHLMADKKIGCVPVVSDGMVVGLVTTTDILRYVES
                     LA"
BASE COUNT          380 a          516 c          578 g          407 t
ORIGIN      
        1 gcgcgccggg gtcgattcac cggtcagcga agagttgtcg acctcgactt cgaacgcttc
       61 ggtgagacga cagtcggcgg gaactagatc gccttcttcg agcacgatga catcgccggg
      121 gaccaatgcg gctgaggcga tttcctgggt gttgccgtcg cggatgatgg tcgatcgttg
      181 tgcgatcagt tgttggagca tctccagggc gcggtccgat ttgtattctt gcaagaacgc
      241 gaacagaccg ttgaccagaa ccacggtcag gatggcgatg cccaactgcg gcaggtcgac
      301 gccgggaacg aaacagagca gcgcggcgat ccacaggagg atggcaaaga agctgaacag
      361 gttgcgcagc aacttaaatt gccaaggatc gcgccgggag cgctgcaaga tgttgccgcc
      421 gtagtggcgc agacggctct gcgcttccgc cgaactcagg ccgttgacca gatcggtctg
      481 gagctcaaaa gcgatttgtt cctgagtgag attgatgtag gtcggcagcg ccgactgttg
      541 ttcggcgcgg gcgatgactt tgatgatctg ctcggggcgg cgctgctgca gtagctcttc
      601 gcggatcgcc ggcagcagcg aagcgatgcg ctgcaagagc tgcaagtgct cggctggtcg
      661 ttcagccgga gtggcgagca gcaagacgat gttgatttta tgagcgttga acgccagacc
      721 gtccggcgca aggcccaaaa gcaattccgg ctcggcgagg ttgtcgatcc gcaagtgcgg
      781 cacggcgatg cctgcgccga tgtagctgta gcgctcgttt tcctggtctg gtgggcaggc
      841 gtggaactgc gccccgagtc cggggatatg cgatcgcgca gtcaattcgt cgatggcgcc
      901 ggcaagctcg cccttgagtc cgaagacgat tttggcgcta ttgagacgct cggcgatcat
      961 ggtgcgtctc tgccattcct ggatgggcgc cgcgtaagag tttgacccaa gccgtggatc
     1021 aaggccgcgg cgacaaccag cagaagaatc gatcgttggc ctagcgcggc tcgtcctgtg
     1081 gcttggccgg cgatggcgag gcagacgagc agagccacgt gcttggcgag cttggtcagg
     1141 aaagcggcaa agacaattgc cgatggcgcg cggcaagcgc agagatatgc ccgtgacatc
     1201 gatattccga gagccgcgaa cgacggtggc tcattcgata tcggcgatct ttttgatgcc
     1261 gtcgccccaa tcctcgactt tgaaatcgct aaacggcacg acgatgggat ctttttcttc
     1321 gatcacgatc atgcgtgtcc tgtgttcgat caagaaggaa actttcagca acaaggagtc
     1381 gtccctgact tcgagcagat taactttctc ttcgaagaag ttatattcct tgttgcgcag
     1441 tatttccttg actcgttctt tagtgagtac ttctttgtcg cccaaaaaac cgcccataac
     1501 gcctcccctg ttctcgctgc gcgaggaatc tcaaattgca aatttcagat tccacagtcc
     1561 aaatttcacg ccaggctttc gacgtagcgc agaatgtctg tcgtcgtcac caggcccacg
     1621 accatgccgt cgctgaccac cggcacgcag ccgatttttt tatcggccat cagatgcgcg
     1681 acatctttga tcggcgtgtc gggggcgacg gtgatgacgc gcttcttcat cacttccttg
     1741 atcaacacgc ttttcagcag cgccgattta ctcttatgct tgagaccgaa gatttgcgcg
     1801 gcggcggcgc cgatcagatc ccgttcggtg acgatgccga ccagccggct gccatcgaca
     1861 atcgggatat ggcgaatgcg g
//
LOCUS       DATIRS010001010         1580 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1749257, whole genome shotgun sequence.
ACCESSION   DATIRS010001010 DATIRS010000000
VERSION     DATIRS010001010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1580
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1749257"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            66..932
                     /locus_tag="VLM90_12820"
     CDS             66..932
                     /locus_tag="VLM90_12820"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HSQ13902.1"
                     /translation="MANPTEKIAILGAGTMGAGIAQVAAQAGFQTLLYDIKQEFIDGG
                     MGKIKSFLQGSRERDKISAEQENETLDRFHTSTSLDDTKGCALVIEAAPEKLELKRDI
                     FKQLDAICGPETLLATNTSSFNVTAIAASTQHQERVLGLHFFNPPPLMALVEVIQGDR
                     TSDESMDKATALMKAMGKSPARAKDTPGFIVNRVARPFYNEGLRVLGDGNASVQTIDR
                     IMKEAGNFRMGPFELMDLIGNDINFAATESLYRSFFEDPRFRPSPIQQRMVAGGNLGR
                     KTGRGFYSYDKK"
     gene            919..>1580
                     /locus_tag="VLM90_12825"
     CDS             919..>1580
                     /locus_tag="VLM90_12825"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HSQ13903.1"
                     /translation="MTKSSLAVIGKGRLADELVALGREKGFDVAQLHDATAIAPTTQF
                     VIDTENGSEDKKRAVLQRLDASLPAPGIIVSSCLRFSTTLMASWIKKPERFVGFATFY
                     PLKDRKLVELGAGLRTLDKSVEQTEQLFKNLGKDAVRVKDTAGLIFPRILSLIVNEAA
                     RSLDEGVASADEIDIAMRLGVNYPQGPLRWADQIGLDDILAVLEGLQRETGDDRYRPA
                     TLL"
BASE COUNT          371 a          481 c          445 g          283 t
ORIGIN      
        1 ttccgtgttt tgagttagaa cccgaaacac gaaacacgaa acacgaaaca cgaaacaaaa
       61 aacccatggc taacccaact gaaaaaatcg ccatactagg cgccggcacc atgggcgcgg
      121 gcatcgccca ggtcgccgcc caagccggct tccaaaccct cctctacgat atcaagcaag
      181 agtttatcga cgggggcatg gggaaaatca aaagttttct ccaaggcagc cgcgagcgcg
      241 acaagatcag cgcggagcaa gaaaatgaaa ctctcgaccg gtttcacacc agcaccagcc
      301 tcgatgatac taaggggtgc gcgctggtga tcgaggcggc accggaaaag ctcgaactca
      361 agcgcgatat cttcaagcag ttggacgcca tctgcggccc ggaaaccttg ctggcgacca
      421 atacttcatc tttcaacgtc accgccatcg ccgcctcaac gcagcatcag gagcgcgtgc
      481 tcggactgca ttttttcaat ccgccgccgc tcatggcctt ggtcgaagtc atccagggcg
      541 accgcaccag tgacgagagc atggacaaag ccaccgcgct catgaaagcg atgggtaaat
      601 cgccggcgcg cgccaaggac acgccgggtt tcatcgtcaa ccgggtcgcc cggccatttt
      661 acaacgaagg gttgcgcgtg ctcggcgacg gcaacgcttc ggtgcaaacc atcgaccgga
      721 tcatgaagga agccggcaac tttcgcatgg ggccgttcga gctgatggac ttgatcggca
      781 acgacatcaa cttcgccgcc accgaatcgc tctatcgctc gttcttcgaa gatccgcgct
      841 ttcgcccgag cccgatccag caacgcatgg tcgccggcgg caatctcggg cgcaagaccg
      901 gacggggttt ttacagctat gacaaaaagt agtcttgcgg tcatcggcaa aggccgattg
      961 gccgatgaat tagtcgcctt gggacgggag aaaggattcg acgtcgcgca gttgcacgac
     1021 gccaccgcca ttgcgccgac cacccagttc gtcatcgata ccgagaacgg cagcgaagac
     1081 aaaaagcgcg cagtcttgca acgcctcgac gcctcgctcc cggcgccggg gatcattgtc
     1141 agctcctgcc tgcggttttc cacgaccttg atggcctcat ggataaaaaa acccgagcgg
     1201 ttcgtcggct tcgcgacatt ctatccgttg aaggatcgca aattggtcga gctcggcgcc
     1261 ggcttgcgca cgttagataa gtcggtggag cagaccgagc agttgttcaa gaacctcggc
     1321 aaagacgccg tgcgcgtcaa ggataccgcc ggactgatct ttccgcggat tttgagtttg
     1381 atcgtcaacg aagcggcgcg cagcttggac gaaggcgtcg ctagcgccga cgagatcgac
     1441 atcgccatgc gtctgggcgt gaactatccc cagggaccgc tgcgctgggc cgatcaaatc
     1501 ggcctcgacg atattctcgc cgtcctcgaa ggactgcaaa gggaaaccgg cgacgaccgt
     1561 taccggccgg ctactttgct
//
LOCUS       DATIRS010001011         1678 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1060983, whole genome shotgun sequence.
ACCESSION   DATIRS010001011 DATIRS010000000
VERSION     DATIRS010001011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1678
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1060983"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..701
                     /locus_tag="VLM90_12830"
     CDS             <1..701
                     /locus_tag="VLM90_12830"
                     /inference="COORDINATES: protein motif:HMM:NF014713.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcdA"
                     /protein_id="HSQ13904.1"
                     /translation="IFSFLSPCVLPLIPSYLSFVSGVSVDEMRSQQARSQVRSRVVLN
                     SLAFIFGFSLVFVSLGASASFLGGLFMGYRNEIRIGGGVFVLLVGLYLVGAFKITALD
                     RYLQFNLKDKPAGYLGSVLVGITFAVAWTPCVGPILGATLALASTSGEIGRGTFLLMS
                     YAAGLGLPFFLSALAIDSFFQFSQKLRHYIQAIHVVGGILLIGVGILLITDYMTILNA
                     YALRFTPHWLLQRL"
     gene            792..1340
                     /gene="folE"
                     /locus_tag="VLM90_12835"
     CDS             792..1340
                     /gene="folE"
                     /locus_tag="VLM90_12835"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR00063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_process: GO:0042559 - pteridine-containing compound
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HSQ13905.1"
                     /translation="MEEQIRQILKAIGEDPEREGLLKTPQRVAEALAFLTRGYDMDPE
                     KVINDALFTEDYSEMIVQRDIDFYSLCEHHMLPFIGKAHVAYIPHHKIVGISKLARLV
                     DIYAARLQVQERMTNQIATTIMEKLDALGVAVVLEAEHLCMRMRGVEKQNSYVITSTL
                     LGAFRTRQETRAEFMNLIRRKD"
     gene            1352..>1678
                     /locus_tag="VLM90_12840"
     CDS             1352..>1678
                     /locus_tag="VLM90_12840"
                     /inference="COORDINATES: protein motif:HMM:NF014808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M17 family peptidase N-terminal
                     domain-containing protein"
                     /protein_id="HSQ13906.1"
                     /translation="MEIRFRDSRADRIKSNLVVIPVREKRLDDPVILALDRRLKGHLR
                     ARISKSNFTGAEASSLLHPTADMLPAAYLLLVGIGAGDTSSDTWRKTGARARKEAAAI
                     GASDFAM"
BASE COUNT          328 a          505 c          436 g          409 t
ORIGIN      
        1 ggattttttc ttttctctct ccctgtgtat tgccgctgat cccgtcgtat ctttctttcg
       61 tttcgggcgt gtccgtcgat gaaatgcgca gccaacaagc gcgctcgcag gtacgctcgc
      121 gcgtcgtgct caactcgttg gcgtttatct ttggcttctc cttggttttt gtttccctcg
      181 gcgcctcggc aagttttctc ggcggcctat ttatgggcta tcgcaatgag attcgcatcg
      241 gcggcggtgt atttgtcctg ctcgtcggac tttatctcgt cggcgctttc aagatcacag
      301 ctctcgaccg ctatttacag ttcaatttga aagacaagcc ggccggttac ttgggttcgg
      361 tcctggtcgg catcaccttc gcggtcgctt ggacgccttg cgtcggtccg atcctcggcg
      421 ccacgctggc attggccagc acctccggcg aaatcggccg cggcacgttc ttgctcatga
      481 gctatgccgc tggtctgggg ctgccatttt tcttgagcgc gctggcgatc gactcatttt
      541 ttcagttctc gcagaaactg cgccattaca ttcaagcgat tcatgtggtc ggcggcattc
      601 tcttgatcgg cgttggcatc ctgttgatca ccgactacat gaccattttg aatgcctacg
      661 cgcttcgttt tacgccccac tggctgctgc agcggctcta gcagctagtt tgtttgaccc
      721 gtcacaggct aaatgttagc tttttgaaac ttaactctag gtcaataagt cccgccaaca
      781 gcggagcaat catggaagaa cagattcggc aaattctcaa agccatcggc gaagatcccg
      841 agcgtgaagg actgcttaaa acgccgcagc gcgtcgctga agcactggcc tttttgaccc
      901 gcggttatga catggaccct gagaaggtga tcaacgatgc gctgtttacc gaagattact
      961 cggaaatgat cgtccagcgc gacatcgatt tttactcgtt gtgcgaacac cacatgttac
     1021 cgttcatcgg caaagctcat gtcgcctaca ttccgcatca taaaattgtc ggtatctcca
     1081 aactcgcccg gctggtcgac atttatgcgg cccgcttgca agtccaagag cgcatgacca
     1141 accagatcgc cacgacgatc atggaaaagc tcgacgcctt gggcgtcgcg gtcgtgctcg
     1201 aagccgagca cctctgcatg cgcatgcgcg gcgtggaaaa acagaactcc tacgtcatca
     1261 ccagcacttt gctcggcgcc tttcgcaccc gccaggaaac ccgcgccgaa ttcatgaacc
     1321 tgatccgacg caaggattga tcgaaaccat tatggagatt cgttttcgcg atagccgtgc
     1381 cgaccgcatc aagtccaact tggtcgttat ccccgtgcgc gaaaagcggc ttgacgaccc
     1441 agtcatcctc gcgctcgacc gccgtctcaa aggccacctg cgcgcgcgca tcagcaaaag
     1501 caacttcacc ggcgccgaag ccagtagtct gctgcatcca accgccgaca tgctgccggc
     1561 ggcttacctg ttgctggttg gcatcggcgc cggcgatacc agcagcgata cctggcgcaa
     1621 aacgggtgcg agggcgcgca aagaagccgc cgccattggc gccagtgact tcgccatg
//
LOCUS       DATIRS010001012         2812 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1552614, whole genome shotgun sequence.
ACCESSION   DATIRS010001012 DATIRS010000000
VERSION     DATIRS010001012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2812)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2812)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2812
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1552614"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..297
                     /locus_tag="VLM90_12845"
     CDS             <1..297
                     /locus_tag="VLM90_12845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_257790189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HSQ13907.1"
                     /translation="CYRCLYPEPPPAEMAPSCAEAGVLGVLPGLIGVIEALEAVKLIL
                     GKGDSLVGRLLHFNTLTMEINTLKLRRDPNCPMCGDHPTIKELIDYEEFCSLRH"
     gene            complement(260..1126)
                     /locus_tag="VLM90_12850"
     CDS             complement(260..1126)
                     /locus_tag="VLM90_12850"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HSQ13908.1"
                     /translation="MERLQKIIARAGLASRREAERWIVEGRITVNGTVVDKLGSQADP
                     FKDSIKIDGKRVKSAAEPLYYALHKPPGVITTLNDPQHRPDITPYVARLGEKKRVFPV
                     GRLDYNTTGLLLLTNDGDLAMRIAHPRYGIPKLYQVKLSACPTEDDFAILRKGIRLED
                     GMTAPARVRVIEKLRKNAWVEIEVHEGKKREVRRMFEALNYFVEKLIRVKVGPIELGA
                     LPVGELRPLYQSEVMALKIAVGLAKPGRSGVERRPVITPKKSGGFNSRRSTYSNKPPS
                     SNGARNRTPRSR"
     gene            complement(1139..1714)
                     /gene="scpB"
                     /locus_tag="VLM90_12855"
     CDS             complement(1139..1714)
                     /gene="scpB"
                     /locus_tag="VLM90_12855"
                     /inference="COORDINATES: protein motif:HMM:TIGR00281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HSQ13909.1"
                     /translation="MEREEVKSILESLLFVADGPLTVQRFAEVVDGIDKEMIHGLLQE
                     LQSDLEAPSRGLQLVEVAGGYQLRTAKINGDWVKKLLGGRPARMGRATLETLAIIAYR
                     QPITKAEIEAIRGVDVDGVIATLLERNLVRAVARKDVPGRPFLYGTTAEFLQLFNLKD
                     LTDLPTLKETDEISLPEISRDVIPLEQAEES"
     gene            complement(1704..2477)
                     /locus_tag="VLM90_12860"
     CDS             complement(1704..2477)
                     /locus_tag="VLM90_12860"
                     /inference="COORDINATES: protein motif:HMM:NF014654.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein A"
                     /protein_id="HSQ13910.1"
                     /translation="MSTRVELEIFEGPLDLLLHLIKKNEVSITDIPIATITEQYLATL
                     DLLQTLSLDVAGEFLVMASTLIHIKSRMLLPAGDDGGDDEDEGYDPRDELVRRLLEYQ
                     RYKEAAQDLDQREVLSRDVFARSASPTEEAGPRGFREVSVFELLAALKRIIDRLPKDT
                     FHEVTLEKITVREKMTHLLDILRTHSSILFEALFAEVSSRMEIIVTFLAMLELVKVRA
                     IRIFQEEMAGPIKIEAAADMDGVSESVVLDQAEEDPYGA"
     gene            complement(2474..>2812)
                     /locus_tag="VLM90_12865"
     CDS             complement(2474..>2812)
                     /locus_tag="VLM90_12865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13911.1"
                     /translation="KLSKMITDPARVRRSDPGEPEKCPAFQFHKIYSTPEEIAEVTQG
                     CRMAGIGCLDCKKIMIKHVVAQLAPITERRAALAQRPKDVEDILLAGNSVAQHKASET
                     MTEVREALGL"
BASE COUNT          555 a          874 c          764 g          619 t
ORIGIN      
        1 tgctatcgct gcttgtaccc cgagccgcca ccggcggaaa tggcgccgag ctgcgccgaa
       61 gccggcgtct tgggcgtgct tcccggactg atcggcgtca tcgaagcgtt agaagcggtg
      121 aagctaattc tcggcaaagg cgacagcttg gtcggccggc tgctgcattt caacaccctg
      181 accatggaga tcaacacgct taagctgcgg cgcgatccca actgtccgat gtgcggcgat
      241 cacccgacta tcaaagagct tatcgactac gaggagttct gttccttgcg ccattagatg
      301 acggcggttt atttgagtag gtggagcggc ggctgttgaa gccgccgctt ttttttggcg
      361 tgatcacagg ccggcgctcg acacctgatc gacctggctt ggccagacca acggcaattt
      421 taagcgccat cacttcgctt tgatacaacg gccgcaactc gccgaccggt agtgcgccca
      481 attcaatcgg cccaaccttg acgcgaatga gtttctcgac gaagtaattg agcgcttcga
      541 acatccggcg cacttcgcgc ttcttgccct catgaacttc gatctcgacc caagcgtttt
      601 tacgcagctt ctcgatcacc cgcacccgcg ccggcgcggt catgccgtct tccaggcgga
      661 tccctttgcg taagatcgcg aaatcatctt cagtcggaca cgcgctcaac ttcacctgat
      721 agagctttgg aatgccgtac ctgggatggg cgatgcgcat ggccaagtca ccgtcgttgg
      781 tcaacagcaa caaccccgtg gtgttgtagt ccaagcgacc cacaggaaag actcgttttt
      841 tctcgcccag gcgcgcgaca tacggcgtga tgtccggccg gtgctgcgga tcgttcaacg
      901 tcgtgatgac gccaggcggt ttgtgcagcg catagtaaag cggctcagcg gcggacttca
      961 cccgcttgcc gtcgatcttg atgctgtctt tgaagggatc ggcttgggag cccaatttgt
     1021 cgaccacggt gccattgacc gtgatgcgtc cctcgacgat ccagcgctcc gcctcccggc
     1081 gcgaagccaa gcccgcccgg gcgataattt tttgcagccg ttccatctgg tctagcgctt
     1141 aactttcttc ggcctgttcg agcgggatca cgtcgcggga tatctccggc agcgagattt
     1201 cgtcagtttc cttgagtgtc ggcaaatcgg tcaagtcttt gagattaaac aactggagga
     1261 actccgccgt cgtgccatat agaaacggcc ggcccggcac atccttgcgc gccaccgcgc
     1321 gaaccaaatt gcgctccaag agcgtcgcaa tcacgccgtc gacatcgacg ccgcgaatcg
     1381 cttcgatctc cgctttggtg atcggctggc ggtaagcgat gatcgccaag gtctccaagg
     1441 tcgcccggcc catgcgcgcc ggccggccgc cgaggagttt ttttacccaa tcgccgttga
     1501 tcttggcggt gcgcagttga tagccgccgg ccacctcaac taactgcaaa ccgcggctcg
     1561 gcgcttcgag atcgctttgc agttcctgaa gcagcccatg aatcatctcc ttgtcgatgc
     1621 catcgacaac ttcggcgaat cgctgcacgg tcagcggccc atcggcgacg aacagcaaac
     1681 tttccaagat cgatttgact tcctcacgct ccatagggat cttcctcagc ctgatcgagc
     1741 accacgctct cagagacgcc gtccatgtcg gccgcggcct cgatcttgat cggcccggcc
     1801 atttcctcct gaaagatacg aatcgcccgg accttgacca actccaacat ggcgagaaaa
     1861 gtcacgatga tctccatgcg cgaactgacc tcggcgaaaa gagcttcgaa caagatcgag
     1921 ctgtgcgtcc tcaggatatc gagcagatgg gtcatcttct cgcgcaccgt gatcttttcc
     1981 agcgtaacct cgtgaaaagt atccttgggc aagcggtcga taatgcgctt caacgccgcc
     2041 agcaattcga acaccgacac ctcgcgaaag ccgcgcggtc cggcctcttc ggtgggtgaa
     2101 gccgaacggg cgaacacgtc gcggctcaac acctcgcgct gatcgagatc ctgcgccgct
     2161 tccttgtagc gctggtattc gagcagacgg cgcaccaact catcgcgcgg atcgtaccct
     2221 tcatcctcat cgtcgccgcc gtcatcgccc gctggcagca gcatgcgcga cttgatgtgg
     2281 atcaacgtcg aggccatgac caaaaattct ccggcgacat ccagactcaa ggtctgcaac
     2341 aggtcgaggg tcgctaaata ctgctcggtg atggtcgcga tcgggatatc ggtgatgctg
     2401 acttcatttt tcttgatcag atgcagtagc aggtcgagag gaccttcgaa aatttccaat
     2461 tcgacgcggg tactcacagt cccagagcct ctctgacttc agtcatggtt tcgctggcct
     2521 tgtgctgtgc gacgctgttg ccagcgagca aaatatcttc gacatccttc ggccgctgcg
     2581 ccaacgccgc gcgccgctcc gtgattggcg ccaactgtgc cactacatgt ttgatcatga
     2641 tttttttaca atcgaggcag ccgattccgg ccatgcggca accttgagtc acctcagcga
     2701 tttcttccgg cgtcgaatag attttatgaa attgaaaggc cgggcacttc tccggctcgc
     2761 cgggatcgct gcgccgcacc cgcgccggat cggtgatcat cttgctcagc tt
//
LOCUS       DATIRS010001013         1973 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_864187, whole genome shotgun sequence.
ACCESSION   DATIRS010001013 DATIRS010000000
VERSION     DATIRS010001013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1973)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1973)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1973
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_864187"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            388..879
                     /locus_tag="VLM90_12870"
     CDS             388..879
                     /locus_tag="VLM90_12870"
                     /inference="COORDINATES: protein motif:HMM:NF013923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HSQ13912.1"
                     /translation="MAAEAQFAALPVSITVNGVKHDALVEPRTLLVYFLREHLNLTGT
                     HVGCDTSQCGACTVHLNGRAVKSCTVLAVQANGAEVKTIEGLADGDNFHPVQEGFREK
                     HGLQCGYCTPGMIMTAVHLLETNPNPSDNEIKHALEGNLCRCTGYVNIVESIRWAAAK
                     MKG"
     gene            951..1820
                     /locus_tag="VLM90_12875"
     CDS             951..1820
                     /locus_tag="VLM90_12875"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HSQ13913.1"
                     /translation="MFPANFGYVAARSVEEALQLMAKHGEDGKLLAGGHSLIPAMKLR
                     LQAPQTLIDLGTVPGLRGVSVDGNNLVIGALTVHTDVASSDLVRRHVPALADAASVIG
                     DVQVRNRGTIGGSVAHADPAADLPVVLTALNASFIAQSPTGKRTISVDDFFTDFYTTA
                     LNANEILTEIRVPIPAAGTGTAYAKLPHPASGYVVVSAAAMIARQASGTCTASRIAIG
                     GLSSGPIRAIATELEMQGKPLTTQMIAGAAAKAAEETDPMEDSYAGAEYKRHVATVYA
                     RKAIEAAVARAAK"
BASE COUNT          450 a          597 c          545 g          381 t
ORIGIN      
        1 acctgcgccg caagctcgtc caacaagccc tcgacgcgct gcaatcgaac gaaaagcaat
       61 gaaataaaag gattggttta aaagccgccc ctgccagtct caattctttt cgtgcccttg
      121 cgttctttgc ggccaattct ccgagtccga atctcttcaa aggagcgcgg acattcctgt
      181 ccgcgagcgg gttagaaaac ccgcgctcct ttttatgcga aatatcaagt tgaaccatga
      241 tcgcggcact gcattcgctc gaattgccag cgccgtctct tgagcccgcg ccgatctcgt
      301 tatatgactg gccagactga atttcacggc atgcagagcc tggttagaaa tcagttcaac
      361 caacatacca acggaggaat gacaagcatg gctgctgagg cccagttcgc agcgctcccg
      421 gtcagcatta cggtcaacgg cgtcaagcat gatgccttgg tcgaaccgcg cacgctgctg
      481 gtttattttt tgcgcgagca cctgaattta accggcaccc atgtcggctg tgataccagc
      541 cagtgcggcg cctgcacggt gcatctgaac ggccgggcgg tgaaatcctg cacggtattg
      601 gcggtgcaag ccaacggcgc cgaagtcaag accatcgaag gcttggctga tggcgacaac
      661 tttcatcctg tgcaggaggg tttccgcgag aagcacggct tgcaatgcgg ctactgcact
      721 ccgggaatga tcatgaccgc cgtgcatttg ctggaaacca atcccaaccc gagcgataac
      781 gagatcaagc acgccctcga aggcaacctg tgccgctgca ccggctatgt caacatcgtc
      841 gaatcgattc gctgggccgc cgcgaaaatg aaaggttgag gaatgaacga tgaaactcga
      901 attttgcgtt tttacttttg acttttgcct tgcaccacta agaggtgacc atgtttcccg
      961 ctaatttcgg ttatgtcgcc gcccgctcgg tggaagaagc tttgcagctg atggccaagc
     1021 atggcgagga tggcaaactt ctggccggcg gtcacagctt gattccagcg atgaagctgc
     1081 ggctgcaagc gccgcaaaca ctgatcgacc tgggcaccgt gccggggttg cgcggggtaa
     1141 gtgtagacgg aaataatcta gtgatcggcg cactgacggt gcacaccgat gtcgcctcat
     1201 cagacctcgt gcgcaggcat gttcccgccc tggccgacgc cgcctcggtg atcggcgatg
     1261 tccaggtgcg caaccgcggc accatcggcg gcagcgttgc ccatgctgac cccgcggcag
     1321 atttgccggt tgtcctgacc gcgctcaacg ccagtttcat cgcccagtcg ccaaccggga
     1381 aacggaccat tagcgtcgac gattttttca ccgattttta caccaccgcg ttaaacgcca
     1441 atgaaattct taccgaaatc cgcgtgccga tcccggcagc tggaaccggc accgcatacg
     1501 ccaagctacc gcacccggcc tccggttacg tggtcgtcag cgcagcggcg atgatcgcgc
     1561 gacaggcctc gggcacctgc accgcttcac ggatcgccat cggcggtttg agcagcggtc
     1621 cgatccgggc catcgcaacc gaactggaaa tgcaaggcaa gccgttgacg acacaaatga
     1681 tcgccggcgc cgcagccaaa gcagccgaag aaaccgaccc gatggaagat tcttacgccg
     1741 gcgcggagta caaacgccat gtcgcgacgg tatacgcgcg caaggcgatc gaagccgccg
     1801 tggcacgcgc ggcaaaatag cgatttcaaa atcttatccc ctctccctct gggagagaaa
     1861 gctagaggga gaaattaaat gaccaccaaa catcaaacca gcggactgat cggcgcctcg
     1921 cccaagcgag tcgaagatcc gccgctgatt accggcaagg gctgctacac cga
//
LOCUS       DATIRS010001014         1808 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_667588, whole genome shotgun sequence.
ACCESSION   DATIRS010001014 DATIRS010000000
VERSION     DATIRS010001014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1808
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_667588"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..634
                     /locus_tag="VLM90_12880"
     CDS             <1..634
                     /locus_tag="VLM90_12880"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF013827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HSQ13914.1"
                     /translation="SVCNLGLIPGELTGLLPPGRSFPLAPGLACVTDPGRQVSHLITS
                     MFLHGGWMHLIGNMWFLWIFGNNVEDSMGRLRFITFYLLTGLAAALGQVMANPGSIIP
                     MVGASGAISGVMGAYLVLYPRVKVYTLVPIFIFFTSIALPAWAMLGYWFVIQLVSSLF
                     SPGDMGGVAFWAHIGGFVAGVALIKLFARKEYIAAHRAHHWRPQRLMRDW"
     gene            complement(731..1507)
                     /locus_tag="VLM90_12885"
                     /pseudo
     CDS             complement(731..1507)
                     /locus_tag="VLM90_12885"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
BASE COUNT          351 a          549 c          479 g          429 t
ORIGIN      
        1 gtcggtctgt aatctcgggc tcattccggg ggaactgacc ggcttgctcc cgccgggccg
       61 aagttttccc ttggcgcctg gccttgcctg cgtgaccgat cccggccgtc aagtatctca
      121 tctaatcacg tcgatgtttc tccatggcgg ctggatgcac ctgatcggca acatgtggtt
      181 cctgtggatc ttcggcaaca atgtcgagga ctccatggga cggctgcgct tcatcacatt
      241 ttacctgctc accggcctgg cggcggcgct gggccaggtg atggccaatc ccggctcaat
      301 catccccatg gtcggcgcct caggcgcgat cagcggagtc atgggcgcct acctggtgct
      361 ctatccgcgt gtgaaagtct acacgctggt gccgatcttt attttcttca catcgatcgc
      421 gctgccggcc tgggccatgc tcggctattg gttcgtcatc caactcgtca gcagtttatt
      481 ttctcccggc gacatgggcg gcgtcgcctt ctgggcgcat atcggcggtt tcgttgctgg
      541 cgtcgcgctg atcaaactat tcgcccgcaa ggaatatatc gcagcgcacc gcgcccatca
      601 ctggcggccg cagcggctca tgcgggattg gtgaaaattc gcactacccg ccgtaactat
      661 caaatcgact agcgatggct aactgcctta agccccgccg agtcgatgga ttttttgtag
      721 tcgcggatgg ttatttctta tagactttgt cgataaaccc gctcttgtcc aactcccgca
      781 cgatgctctc gtcgaccatg tcttcgaagc gcagttgcgc gcctggcttg cggctggtcg
      841 cttccttgat ctggacatcg acaccgggcc gggtcaccaa aggcacgaca tcatagagtt
      901 tcgcgctcgc cgtgtaggcg gcctccacgt aatcctcgtt attcgtcctg gcatacttcg
      961 ccataatttt cttgctctcg tctttgcggg ttttaacaaa atgcaccgct tcgatatgcg
     1021 ccatgataac tttcttgacg gtttctcggt tcttctgcag ataggctttc gtcgtcgccg
     1081 cgcaaatata cgggaattcg aagcgctgct tgaagtccgc cgtgctgatc aatatccgat
     1141 gcggcatccc tttggtcagg tgaatgactc ccggcggcga cgggaatccg gcaatgcgcc
     1201 cggcgcgaaa ggccgcggca cgttccgacg agccgccgac ttgcatgatc ggcacctgct
     1261 tgtccggttc caagttcaaa ccgcgcaata gcgcccgcgc cgccacatcc gaagcgctgc
     1321 caagacggct gatgccgatg cttttgcctt tgagttcttc cgccgatttg atcgattcat
     1381 tgacgaccaa ctcgtaaggt aatgagttga gatagcatgc gaccatggcg atctgcgcgc
     1441 cggccaacac cgcgctcgcc accgcgccgc ccgacacgtt ggcaacatgc acgtcccccg
     1501 ccagagactc gtcaaactgg tcgtggtgct gggaatgaaa agcagttcag actccaagcc
     1561 atgttttttg taatagccta aatcctgtgc gataaaccac accgcattgc tggtctccaa
     1621 ggcactatgc gataggcgaa tcttctcctg agccgaagcc gcaccgaaat acatggccag
     1681 gacaaaaaat aaactgccga gaacagagca acgccgtgat actttcatgc gacctcccat
     1741 tggactgtga cgttacgagc cgtgacaaag ttgacctaaa gttccgcctg catcgctgag
     1801 aaataatc
//
LOCUS       DATIRS010001015         2109 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_372692, whole genome shotgun sequence.
ACCESSION   DATIRS010001015 DATIRS010000000
VERSION     DATIRS010001015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2109
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_372692"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..346)
                     /locus_tag="VLM90_12890"
     CDS             complement(<1..346)
                     /locus_tag="VLM90_12890"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13915.1"
                     /translation="MAYWSRSGQSVIVLVALLAAVSLGDAAQPTKVRMSYSSRSNSNT
                     PFVIAYRKGFFAEEGMDVEMIQVNPRLGATALLNGDIDFTATFGSTLRGIVGGFPIKF
                     VAVSVKKSEHFLI"
     gene            complement(359..1483)
                     /locus_tag="VLM90_12895"
     CDS             complement(359..1483)
                     /locus_tag="VLM90_12895"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSQ13916.1"
                     /translation="MKHFAYIIVGAGFAGAATAYHLARQGVADVLVLEQESIPGFHAS
                     GRNAAMLRQCIAEPDLTKLALDGAAFIRTLPADWPEPVLFKNNGSLLLGSGAGWEKLR
                     RDGEIGRSVGVPGIAEWSPEQAIDHVPVLKEAEFDGALWCASDGVVDIHALLSGYLKF
                     AASRGAQIRYNASVRAVRARHGADIELESAEGVVSCKVLVNASGAWANVVAALAGARP
                     LPLRACRRHLFVSPPLAWIDRSWPFVWDVTHDIYFRPEGDGLLLCACDQTELAPGDPP
                     VDESVKEMLAEKIQRHMPGLSEVSISRGWAGLRTLTPDGRFVIGWDAQVDGLFWVAGL
                     GGHGMTTSAAVGELAAALLVGGPGQRSAPFAPERFYEKLP"
     gene            1631..>2109
                     /locus_tag="VLM90_12900"
     CDS             1631..>2109
                     /locus_tag="VLM90_12900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13917.1"
                     /translation="MRIHRYTQWDGTQEILFPTTDDIINQLSDHLLEEEGVRRALRDM
                     MRRGFTSEDGQRSVKGMRDFLRQADEKRRELLNKYSPDSFKLTPEEQQKLSEKLGNLA
                     DKMEAYNEQMRNFMERMSGKFADRMDELGQKMSEAYQRYQELQQRLKQQIQERGMQG"
BASE COUNT          481 a          676 c          588 g          364 t
ORIGIN      
        1 caattaaaaa gtgttcggac tttttcaccg acacggcgac aaacttgatt ggaaagccgc
       61 cgacaatgcc gcgcaacgtg ctgccgaagg ttgcggtaaa atcgatatcg ccgtttagca
      121 acgcggtggc gccaagccgc ggattgactt ggatcatctc cacatccatc ccctcttcgg
      181 caaagaagcc tttgcgatag gcgatgacaa acggcgtgtt cgagttactc cggctcgagt
      241 aagacatgcg cactttggtc ggttgcgccg cgtcgcccag cgaaacggcg gcaagcagcg
      301 ccaccaggac aatgaccgac tgacctgatc gactccagta cgccattagt acactccatt
      361 acggcaattt ttcatagaat cgctccggcg caaacggcgc cgagcgctgg cccggcccgc
      421 caaccaacaa cgccgccgcc aactcaccca ccgccgcgct ggtcgtcatg ccatgaccgc
      481 cgaggccggc gacccagaac agcccatcga cttgcgcgtc ccagccaatg acgaagcggc
      541 cgtccggggt cagcgtgcgc aatccggccc agccgcggct gatcgacact tcggataggc
      601 ccggcatatg gcgctggatt ttctcggcga gcatttcttt aacgctttca tccaccggcg
      661 gatcgcccgg cgctaattca gtctggtcgc aagcgcagag cagcaagccg tcaccctccg
      721 ggcgaaaata gatatcatga gtgacgtccc agacaaacgg ccaactgcga tctatccacg
      781 ccagcggtgg cgagacaaac aagtggcgcc ggcaggcgcg caacggcagt ggccgcgcgc
      841 cggccaatgc agcaacgacg ttcgcccagg cgccgctggc gttgactaag accttgcaac
      901 tgacgacgcc ctcggcgctt tccaactcga tatccgcgcc atgacgcgcg cgcaccgccc
      961 gtaccgaggc attgtagcga atctgcgcgc cccggctggc ggcgaacttt agataaccag
     1021 acaagagcgc atgaatgtcg acgacgccgt cgctggcgca ccacagggcg ccgtcgaact
     1081 cagcctcttt gagcaccggc acatggtcga tcgcttgttc cggcgaccac tcggcgatgc
     1141 cgggaacgcc gacactccgg ccaatctcgc cgtctcgtct gagcttctcc cagccggcgc
     1201 cgctgccgag taataacgag ccgttgttct tgaatagcac cggctccggc caatccgccg
     1261 gcagggtgcg gataaatgcc gcgccatcga gcgccaactt agtcaggtcg ggctcggcga
     1321 tacactggcg cagcatcgcc gcattgcgtc ccgaagcgtg aaatcccggg atgctttcct
     1381 gttccaaaac caggacatcg gcaaccccct ggcgagccaa atggtaagcg gtggcggcgc
     1441 cagcgaaacc ggcgccgaca atgatgtaag caaaatgttt catagtattt ggccgcccac
     1501 taatttctat acgaagttcg tgccatttcc aaagggttag ctcggagttt tcgcggcctc
     1561 ctcgggatcc aaagcgaggg caatattttg ggtttgaaac gagcaggaac tgcgctatag
     1621 tccatcgcaa atgagaatcc atcgttacac ccagtgggat ggcacgcagg aaattctctt
     1681 tcccacgacc gacgacatca tcaaccagct ctccgaccat ctgctcgagg aagagggcgt
     1741 gcgccgcgcc ttgcgcgaca tgatgcggcg gggctttacc tccgaagacg gccagcgctc
     1801 ggtcaaaggc atgcgcgact ttctgcgcca ggccgatgag aagcgccgcg agctgctcaa
     1861 taaatactcc cccgactctt tcaaactgac ccctgaagag cagcaaaagc tcagtgaaaa
     1921 gcttggcaac ctcgccgata agatggaagc ctacaatgag cagatgcgca acttcatgga
     1981 gcgcatgtcc ggcaagttcg ccgaccgcat ggacgaactc ggccagaaaa tgtcggaggc
     2041 ctaccagcgc taccaagagc tgcagcaacg cttgaagcag cagatccaag aacgcggcat
     2101 gcaaggcaa
//
LOCUS       DATIRS010001016         1752 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1160166, whole genome shotgun sequence.
ACCESSION   DATIRS010001016 DATIRS010000000
VERSION     DATIRS010001016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1160166"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1038)
                     /gene="rlmN"
                     /locus_tag="VLM90_12905"
     CDS             complement(<1..1038)
                     /gene="rlmN"
                     /locus_tag="VLM90_12905"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: protein motif:HMM:TIGR00048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HSQ13918.1"
                     /translation="MKPNIKDLSFKEFVALLVERKHPSYRARQVWQWLFQKRATSFDE
                     MTNLSRPLRDELAEAFSIGRLEIERRAQARDGTIKFLFGLADGESIESVLIPEAHRLT
                     LCVSTQAGCGLGCAFCATAVLGLKRNLTGSEIVDQVLEAGRTLQDERRITHIVLMGMG
                     EPLANYEHTLRALEIITDGDWGIGISPRRVTLSTVGLVPQIKKLMEETRVNLAVSLHA
                     PNDELRGQLMPVNRKYPLKQLMDCCRALPLPRRKRITFEYVLLRGVNDSEVHARQLAA
                     LLRGIPSKVNIIPFNPHPQSKFARPTDQEIARFQRVLHDEGVQINLRRPRGDDIQAAC
                     GQLQGESLGRAR"
     gene            complement(1076..1495)
                     /gene="ndk"
                     /locus_tag="VLM90_12910"
     CDS             complement(1076..1495)
                     /gene="ndk"
                     /locus_tag="VLM90_12910"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: protein motif:HMM:NF012554.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HSQ13919.1"
                     /translation="MSVERTLSIIKPDATGRNLIGDILRRFEAAGLEVAAGKLLRLTP
                     ERAQAFYAVHKERPFFASLCAYMSSGPIFVAVLEGENAILKNREIMGATDPAKAAPGT
                     IRKDCGKDVEQNAVHGSDGPETAAGEIAFFFKPDEIF"
     gene            complement(1492..>1752)
                     /locus_tag="VLM90_12915"
     CDS             complement(1492..>1752)
                     /locus_tag="VLM90_12915"
                     /inference="COORDINATES: protein motif:HMM:NF012758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13920.1"
                     /translation="MIGEIGGSAEEEAAAWIKAKMKKPVVGFIAGQTAPPGKRMGHAG
                     AIISGGKGTAKEKIAAMKAAGIHMASSPATIGQTMQEALSKS"
BASE COUNT          323 a          553 c          507 g          369 t
ORIGIN      
        1 ccgggccctt cctaacgact cgccctggag ttggccgcaa gccgcctgga tatcgtcgcc
       61 gcgcggccgg cgcaggttga tctgcacgcc ttcgtcgtgc aggactcttt ggaagcgcgc
      121 gatctcctgg tccgtgggcc gggcaaattt gctttgcgga tgcggattga acggaatgat
      181 gttcactttg ctcgggatgc cgcggagcag cgcggctagc tggcgcgcat gaacttccga
      241 atcgttgacg ccgcgcagca gcacgtattc gaaggtgatc cgtttgcgcc gcggcagagg
      301 cagcgcgcgg cagcagtcca tcagctgctt gagcggatac ttgcgattga ccggcatcaa
      361 ctggccgcgc aattcatcgt tgggcgcgtg cagcgagacc gccagattga cccgcgtttc
      421 ttccataagc ttcttaattt gcggcaccaa gccaaccgtc gaaagcgtga cccttctcgg
      481 cgaaatgccg atgccccaat cgccgtcggt aatgatttcc agagcccgca aggtgtgctc
      541 gtagttggcc agcggttcgc ccatgcccat gagcacgatg tgcgtaatgc ggcgctcgtc
      601 ctggagcgtc cggccggcct cgagcacctg gtcgacgatc tcactcccgg tcaaatttcg
      661 tttcagccct agaaccgcag tggcacaaaa ggcacacccc aggccgcagc cggcctgggt
      721 cgaaacgcac agcgtcagcc ggtgcgcttc cgggatgagg acgctttcta tactctcgcc
      781 atcggcgagt ccaaatagaa acttgatggt gccgtcgcgc gcctgggccc ggcgctcgat
      841 ctccagacgg ccgatcgaaa aagcctccgc aagctcgtcg cgcaacgggc gggacagatt
      901 ggtcatctcg tcgaacgagg tcgcccgctt ctgaaacagc cattgccaca cttgcctggc
      961 gcgatacgag ggatgtttgc gctcaaccaa gagcgcaacg aattccttga agctcaaatc
     1021 cttgatattg ggcttcactt acagctccag ccattctgcg gggatagcac acagactaga
     1081 aaatttcgtc gggcttaaaa aaaaacgcga tctcgccggc cgcggtctcc ggtccgtcgg
     1141 agccatgcac ggcattttgt tcgacgtctt tgccgcagtc cttgcggatc gtccctggcg
     1201 cggctttggc cggatcggtg gcgcccatga tctcgcgatt tttcaggatc gcgttttcgc
     1261 cttccaacac cgccacgaag atcggaccgg acgacatgta agcgcacagg ctggcaaaga
     1321 aagggcgctc cttatggacg gcgtaaaacg cctgcgcccg ctccggcgtc aaacgaagaa
     1381 gtttaccggc ggcgacttcc agcccggcgg cttcgaatcg tcggagaatg tcaccgataa
     1441 gattgcgccc cgtcgcgtcg ggtttgatga tggataacgt tctttcgaca ctcatgattt
     1501 acttaaagcc tcctgcatcg tttggccgat ggtcgccggc gacgacgcca tgtgaatccc
     1561 ggccgctttc attgccgcaa ttttttcctt ggcggtgccc ttgccccccg aaatgatcgc
     1621 gccggcgtgg cccattctct ttcccggcgg cgcagtctgg cccgcgataa agccgaccac
     1681 gggcttcttc atcttggcct tgatccaggc ggcggcttct tcttccgcgc tgccgccgat
     1741 ctcgccaatc at
//
LOCUS       DATIRS010001017         2411 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_372820, whole genome shotgun sequence.
ACCESSION   DATIRS010001017 DATIRS010000000
VERSION     DATIRS010001017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2411
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_372820"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..742
                     /locus_tag="VLM90_12920"
     CDS             <1..742
                     /locus_tag="VLM90_12920"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ13921.1"
                     /translation="VLPEVRDAKQWWGGHLWVDTTKRFIYMFQAYLPESIWYNSELVK
                     PSELRSFDDFLNPKWKGKIGFLDPRTPGGGDSNWSYMWQVKGEEYLKNLAAQDLFIGR
                     DQRVLSESLAKGRVAVMIGNTYYSFMPFVKAGLPVKPLPTLKEGTFGTGGSGNLAIIK
                     APAHPNSTKVFVNWLLSRDGQEVFSRGLAQATRRLDVDTRWLRDLGTIAAKDAMSVED
                     FWRVENQSEEKLDKVRKPAQSSAHALLK"
     gene            802..2214
                     /locus_tag="VLM90_12925"
     CDS             802..2214
                     /locus_tag="VLM90_12925"
                     /inference="COORDINATES: protein motif:HMM:NF045502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HSQ13922.1"
                     /translation="MANTATTSQSSFDILEGYFKKYPDVPKETILKQHMLSLGHWFSD
                     AALDASAGALVKSYRLFSYDLVPMSAFKRNEHRRVPEHFILLNGPYAMRPVAIQTSLS
                     PDSPYVVDVVDGRLVLTVDGQVVSEVRIPKTPDYYSKSLPDGTPYHEIVAFASFITIF
                     RNCQYWGAKEECKFCDINENARQMKLSRDFTLNAPVKSVGDVVAVCEYVANDAKKIGA
                     GQGFVLSGGSITKTLHGKSEADFYIPYIEAIKNIGTNPRITFEVNARPREEVRRYKKA
                     GADHIHFNMEVWDKKLFPWINPGKAERVGWDNWVRWMEDAVEVFGNGMVQPSFVSGIE
                     MARPHGFKTVAEAVASASDCFEYLMSRGIMPRPQQWRREPSTALCKEAEQPPVPLDYY
                     IQMTRKWYETYQKYSDRLPKFGTRKGGLLAERNLLGPVHGAYGDFAMLKENLFPADVE
                     EQINRRSVPWENIAGGAHVS"
     gene            2204..>2411
                     /locus_tag="VLM90_12930"
     CDS             2204..>2411
                     /locus_tag="VLM90_12930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13923.1"
                     /translation="MFHDISTEMRQVMRAMEEQLARDQRSLRSVDTDVARILSLLAMS
                     APPGAFLELGSSGGYSSLWLALAAR"
BASE COUNT          551 a          684 c          696 g          480 t
ORIGIN      
        1 ggtgctaccc gaagtcagag atgcgaaaca gtggtggggc ggtcatctgt gggtcgatac
       61 gacaaaacga ttcatttaca tgtttcaggc ctatttgccg gaaagtattt ggtacaacag
      121 cgagctggtg aaaccgagcg agctgcgttc cttcgacgac tttctaaacc ccaagtggaa
      181 aggcaagatc ggcttcctcg acccgcgcac cccaggcggt ggagactcca actggtccta
      241 catgtggcag gtcaaaggcg aagagtattt gaaaaatctc gcggcgcagg atttatttat
      301 cggccgcgac cagcgtgtgc tttcggaaag tctggccaag ggacgcgtcg ccgtcatgat
      361 tggaaatacc tactattctt ttatgccgtt tgtgaaagcc ggtttgccgg tcaagccctt
      421 gccgactctc aaagagggga ccttcggcac cggcggcagc ggcaatctgg cgatcatcaa
      481 agcaccggcg catccgaaca gcacaaaagt ttttgtcaat tggcttttga gccgcgacgg
      541 gcaggaagtc ttttcccgcg gcctcgctca agctactcga cgtctcgatg tcgatacccg
      601 ctggctgaga gatttgggca ccatcgcagc gaaagatgcc atgtcagtcg aggacttttg
      661 gcgggtcgaa aatcagtcgg aagaaaaact cgataaggtg cgcaaacccg cgcaatcgtc
      721 tgcccatgcg ctgttgaagt agcggtggtt gcgctgagta aaaagtgtaa gttaagagtt
      781 agcagccaaa ggagccatga aatggctaac actgcgacaa cgagccaatc aagcttcgat
      841 atcttggaag ggtatttcaa aaaatatccg gacgttccca aggagaccat tctcaagcag
      901 catatgctca gcctaggcca ttggtttagc gatgcggcgc tcgatgcttc cgcgggagcg
      961 ctggtcaaat cctatcgctt gttctcttac gacctcgtgc cgatgtccgc ttttaaaaga
     1021 aacgagcacc ggcgcgtgcc ggagcatttt attttgctca acgggcccta tgcgatgcgg
     1081 ccggtggcaa tccaaacatc attgtcgccc gattcgccct atgtggtcga tgtcgtcgac
     1141 ggccggctcg tcctgaccgt cgacgggcaa gtcgtatccg aggtacggat tcccaaaacg
     1201 ccggactatt attctaaatc cttacccgac ggcacgccct atcacgagat cgtcgcattc
     1261 gcctcgttca tcacgatctt ccgcaactgc cagtactggg gagccaagga agaatgtaag
     1321 ttctgcgaca tcaacgagaa cgcgcgccag atgaagctgt cgcgcgactt caccctcaac
     1381 gctccggtga agtcggtggg cgacgtcgtc gcggtctgcg aatacgtcgc caatgacgcc
     1441 aagaaaatcg gcgctggcca gggcttcgtg ctgagcggcg gcagtatcac caagacgctc
     1501 cacggcaaga gcgaagcaga tttctacatt ccgtatattg aagccatcaa aaatatcggc
     1561 accaacccgc gcatcacctt cgaagtcaat gcgcggccgc gcgaagaagt gcggcgctac
     1621 aaaaaagccg gcgccgacca tatccacttc aatatggaag tatgggacaa aaagctcttt
     1681 ccctggatca atcccggcaa ggccgagcgg gttggctggg acaactgggt gcgctggatg
     1741 gaggacgccg tcgaagtgtt cggcaacggc atggtccagc caagcttcgt gtccgggatc
     1801 gagatggcgc gcccgcacgg tttcaagacc gtggcggaag ccgtagcctc ggctagcgac
     1861 tgcttcgaat atctcatgtc acgcggcatc atgccgcggc cacagcaatg gcggcgcgaa
     1921 ccgtcgacgg cgctgtgcaa agaagccgag cagccgccgg tgccgctgga ttactacatc
     1981 cagatgacgc gcaagtggta tgaaacctat caaaagtata gcgacaggct gcccaagttc
     2041 ggcacgcgca agggcgggct gctcgccgaa cgcaatttgc taggcccggt gcacggcgcc
     2101 tacggcgatt tcgccatgtt gaaagagaat ttattcccgg ccgacgtcga agagcagatc
     2161 aaccggcgca gcgtgccctg ggaaaacatc gccgggggcg cccatgtttc atgacatttc
     2221 gaccgaaatg cggcaagtga tgcgcgccat ggaagagcag ctggcgcgcg atcaacgttc
     2281 gctgcgcagc gtcgacaccg acgtcgcgcg tattctctcg ctgctcgcga tgtccgcccc
     2341 gcccggcgcc tttctcgaac tcggcagcag cggcggctac tcgagtctat ggctggcgct
     2401 cgccgcccgc g
//
LOCUS       DATIRS010001018         1534 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1553307, whole genome shotgun sequence.
ACCESSION   DATIRS010001018 DATIRS010000000
VERSION     DATIRS010001018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1534
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1553307"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..470
                     /locus_tag="VLM90_12935"
     CDS             <1..470
                     /locus_tag="VLM90_12935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13924.1"
                     /translation="HESRLNGRFAQNRITRVIPDEANGYRTVAIDLNPHILLAAQPDA
                     RELGLAQPLDLVFQPYGREAYVAVFGSRKVGVVDGVGKIIDRIGVGFGPGGLALDPKR
                     QRLYVLNHLDATISIVDTGKRRSIGAVALRHDPTPAIIKQGRPFFFDAALTSR"
     gene            477..>1534
                     /locus_tag="VLM90_12940"
     CDS             477..>1534
                     /locus_tag="VLM90_12940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13925.1"
                     /translation="MSCATCHVFGDVDGLAWDLGNPVGPSMDIPVGLRNSGLSSPHQL
                     LHPLKGPMVTQSLRGLAGNGPYHWRGDRFGDALAPGGDVASFKDFNPAFMDLLGRGEE
                     ITDAAMEAFARYILTIRFPPNPFQRLDRSLDAQQQAGFEFFTGPFLSGAGQQNCVSCH
                     NLPAGTNRLVNFEGPQIGRDMKTAQLRNVYDKIGRFNAAGPQVSGFGLLHDGTFESVV
                     SFLRLDVFFFPGTVEQEKDVIRRQLHDYVVAFDTGMAPAVGRQLTIAGALTGDDSQVF
                     ELLASRAGAGDCDLIARGWEGKSLRGWLYRNGAFQGDRRGEATLAPEALRARYLERGE
                     PLTLTCVPPGDGWRSALDR"
BASE COUNT          261 a          455 c          490 g          328 t
ORIGIN      
        1 cgcacgagtc acggctcaac gggcgcttcg cgcagaatcg catcacgcgg gtgatcccgg
       61 atgaggctaa cggctaccgg acggttgcca tcgatctgaa tccccatatc ctactcgcgg
      121 cgcagcccga cgctcgcgag ctcgggttgg cgcaaccgtt ggatttggtt tttcaaccct
      181 acggtcggga agcgtacgtc gcggtgttcg gatcgcgcaa ggtcggcgtg gtcgatggcg
      241 tcggcaagat catcgatcgt atcggtgtag gcttcggacc cggcggtttg gcgctcgacc
      301 ccaagcgcca gcggttgtat gtcctcaatc atctcgatgc gacgatctcg atcgtcgaca
      361 ctgggaagcg ccggagcatc ggtgcagtcg ctttacgcca cgatccgacg ccggcgatca
      421 tcaagcaagg acggccgttt tttttcgacg ccgctctgac ttcgcgctag ggcgatttgt
      481 cttgcgccac ctgtcatgtg ttcggcgatg tcgacggatt ggcctgggac ttgggcaatc
      541 ccgtcgggcc gtcgatggat attcccgtcg gcctgcgcaa tagcgggctt tcatcgccgc
      601 atcaactcct gcaccctctc aaagggccca tggtgacgca gagtttgcgc gggcttgccg
      661 gcaacgggcc gtatcattgg cgtggtgacc gcttcggcga cgcgctggcg ccgggcggtg
      721 atgtcgcgag cttcaaggat ttcaatccgg cctttatgga tctgctcggc cgcggcgagg
      781 agattaccga tgcggctatg gaggcatttg cccgttatat tttaacgatt cgatttccgc
      841 ccaacccgtt tcagcggctc gatcgcagcc tcgatgccca gcaacaagcc ggcttcgagt
      901 tttttaccgg gccgttccta tccggcgccg gacaacagaa ctgtgtgagc tgccacaatc
      961 tcccggcagg caccaatcgt ttggtgaatt tcgaagggcc gcagatcggc cgcgatatga
     1021 agacggccca gttgcgcaac gtctacgaca aaattggccg cttcaatgcc gccggtcctc
     1081 aggtgtcggg gttcggcctg ctgcacgacg gtaccttcga aagcgtggtg agttttttgc
     1141 gcttggatgt tttctttttt cccggtactg ttgagcagga gaaagatgta attcggcgcc
     1201 aactgcatga ttacgttgtg gcattcgaca ccggcatggc gccggcagtt ggacggcagc
     1261 tgacgatcgc cggcgcattg accggcgacg acagtcaagt attcgaactg cttgcgagca
     1321 gagccggcgc cggcgattgc gatctcattg cccgcggctg ggaagggaag tcgctgcgcg
     1381 gctggttgta tcgaaacggc gctttccaag gcgaccgccg cggcgaagcg acactggcgc
     1441 cggaggcgtt gcgcgcgcgt tacctcgagc gcggtgaacc gctgacgttg acctgcgtcc
     1501 cgccgggcga cggctggcgc agcgcgctcg atcg
//
LOCUS       DATIRS010001019         2000 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_668012, whole genome shotgun sequence.
ACCESSION   DATIRS010001019 DATIRS010000000
VERSION     DATIRS010001019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2000
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_668012"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            173..>2000
                     /locus_tag="VLM90_12945"
     CDS             173..>2000
                     /locus_tag="VLM90_12945"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HSQ13926.1"
                     /translation="MNAGRDYFEIAAELKKRVEGDLHFDKYSRLLYSTDASIYQIEPI
                     GIVVPRHKGDVQAAIEVAKRLGVSILSRGGGTSLAGQAVGHSIVLDFSKYMQNVLEVN
                     QEELSCRVQPGLVQDELNAYVRGQGLQFGPDTSTSNRATIGGMVGNNSSGAHSLTYGK
                     TLDHVIELTVLLADGSEVILKDLAPAEMERKSKVNSVEGRAYREVFRLAQQHKSEIVA
                     RYPKIMRRVSGYNLDEFVKPQPFNLARMIVGSEGTLAAIVEAKMRLVPKPKWTAMDVI
                     HFNDDIEALECAQIVLTTKPYAMESTDKMILNLARGNIEQSRKLGFVQGTPDSLLMVE
                     YAGETEAEVRAQVEKLEELRKREKIGYAATLAFKPEEVKSIWGVRKAGLGLLLGMKGD
                     KKPIAFVEDTAVSPEKLPEFIKRFREIVTRHDTVAGYYGHCSVGCMHIRPLINLKENG
                     EQQKMVSIANAISDLVLEFNGAMSGEHGDGLARSHFNAKLFGPALYDGFRQIKRAFDP
                     NNLFNPGKIVDAPAMTESLKISPQYKTWEPQTTLDFTEQGGFARAVEMCSGMGECRKK
                     LDGTMCPSYMGTLDEEHSTRGRANALRNVLAGLVPKAEFTGKR"
BASE COUNT          438 a          545 c          610 g          407 t
ORIGIN      
        1 ttcttcttgg cgaaatcgat gttaaaaggc attgaggctg ttagttggcg cgacggggtt
       61 gccgcgctgt tggtggtttg cggcgtgttg gtgttgcggt tggcatgaat ccgttcaaag
      121 gttcaaggtt caaaagttca aggccggatt gttagaccgc atgggggcga taatgaatgc
      181 tggcagggat tattttgaga tcgcagcgga actaaagaaa cgggtcgaag gcgaccttca
      241 tttcgacaaa tattcgcggc tgctctattc caccgatgcg tcgatatatc agatcgaacc
      301 catcggtatc gtcgtgccgc gccataaagg tgatgtccag gcggccatcg aagtcgccaa
      361 gcgcttgggc gtttcgatcc tgtcgcgcgg cggcggcacg tcactggcag gacaagccgt
      421 cggtcactcg atcgtcttgg atttttccaa gtacatgcaa aacgtgttgg aagtgaatca
      481 agaagagctg tcgtgccgcg tccaaccggg gctggtgcag gacgaactca atgcctacgt
      541 gcgcgggcag gggttgcagt tcggtccgga cacctcgacg tccaatcgcg ccaccatcgg
      601 cggcatggtc ggcaacaatt cttccggcgc tcattcgctc acctatggca agacgctcga
      661 ccatgtcatc gagctgaccg tgttattagc cgacggttcg gaagtgattt tgaaggatct
      721 ggcgccggca gagatggagc gtaagagcaa agtcaacagt gtcgaggggc gcgcctaccg
      781 cgaagtgttt cgtttggcgc agcagcacaa gagcgaaatc gtcgcgcgct acccgaaaat
      841 catgcggcgg gtgtccggtt ataatcttga tgagttcgtc aagccgcagc cgttcaacct
      901 agcgcgcatg atcgtcggct cggagggaac cttggcggcc atcgtcgagg ccaagatgcg
      961 cctcgtgccc aaacccaagt ggaccgccat ggacgtgatc cacttcaacg acgacatcga
     1021 agcgctggag tgcgcccaga tcgttttgac caccaagccc tatgccatgg agtcgaccga
     1081 caagatgatc ttgaatctcg cccgcggcaa catcgagcag tcccgcaagc tgggctttgt
     1141 ccaaggcacc ccggattcgc tcttgatggt cgagtatgcc ggcgaaaccg aggccgaggt
     1201 gcgggctcaa gtcgagaagc ttgaagagct gcgcaagcgc gaaaagatcg gttacgcggc
     1261 gaccctggcg ttcaagcctg aagaagtgaa gtcgatttgg ggtgtgcgca aagccggatt
     1321 gggcttgctg cttggcatga agggcgacaa gaagcccatc gccttcgtcg aggataccgc
     1381 ggtgtcgccg gagaagctgc cggagttcat caagcgtttt cgcgagatcg tcacgcgcca
     1441 cgataccgtg gcgggttatt acggccattg ttccgtcggc tgcatgcata ttcgaccatt
     1501 aatcaatctg aaagaaaacg gcgaacagca aaagatggtg tccatcgcta acgcgatctc
     1561 cgacttggtg cttgaattca acggcgccat gtccggcgag catggcgacg gcttggcgcg
     1621 cagccacttc aacgccaagc tatttggccc ggcgctttac gacggttttc gccagatcaa
     1681 gcgcgctttc gatccaaata atttgttcaa ccccggcaaa atcgtagacg ctccggcgat
     1741 gacggagtcg ctgaagatca gcccgcagta taaaacttgg gagccgcaga cgacgctgga
     1801 tttcaccgaa caaggtggct tcgcgcgcgc cgtcgagatg tgcagcggca tgggcgagtg
     1861 ccgcaaaaag ctcgacggca ccatgtgtcc gtcgtacatg ggcaccctcg acgaagaaca
     1921 ctcgacccgc ggccgcgcca atgcgctgcg caacgtcctt gccggcttgg tgccgaaagc
     1981 cgagttcacc ggcaaacgct
//
LOCUS       DATIRS010001020         1649 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1750352, whole genome shotgun sequence.
ACCESSION   DATIRS010001020 DATIRS010000000
VERSION     DATIRS010001020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1750352"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1636
                     /locus_tag="VLM90_12950"
     CDS             <1..1636
                     /locus_tag="VLM90_12950"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSQ13927.1"
                     /translation="YLEPHAATVAIEPDGRVQVWAGVKNPFGVRSQLSKCLSLPEERI
                     RMNVVNVGGEFGGKGDGVDLPILYFLAQKTGRPVKIVMTYAEELSASNPAHPTVITIR
                     SGVKRDGRIVARKMRAVHASGGYGALKSNTSLATWHYAGGQYRIDHADIEFMQIYTNT
                     VPGGYYRSPGAVATAFAVDCHTDIIAKELKMDPAEFRMKNFLNEGETDAVGQALQDVR
                     FREVLQGALDAAGWKKPKKRNHGRGIALSGRHISGGDTGVILSAEADDSYLIISPSID
                     QGSGTHTILRQLVADRMKVGIDQVRVDIGDTDTAPRDGGMRASRMTYVAGNAMVKACD
                     QLREQLLSQAARMLECRADEIDFDGRRFSLRHDRGQQVALRRVVAQSTEPLKVTVYED
                     YRAPDEVSYICAQVAEVEVDPETGAVKLHRMVTAHDVGTIINPTAHQGQIDGAAVMGV
                     GQGLMEEIVMDQGRVTNNNLGDYKLPSVADIFELETVLVASEGGVGPHNAKPIGEFAN
                     NAPPAAIANAIADAVGVRRFELPVKAENVYQALKQK"
BASE COUNT          349 a          499 c          513 g          288 t
ORIGIN      
        1 ctatctcgaa ccccacgcgg cgaccgtcgc catcgaaccg gacggtcgag tgcaggtctg
       61 ggccggggtg aaaaatcctt tcggagtacg cagccaattg tccaaatgct tgagcctgcc
      121 cgaagagcgc atccgcatga acgtggtcaa cgtcggcggc gagtttggcg gcaagggcga
      181 cggcgtcgac ctacccattc tctactttct cgcccaaaag accggccgcc cggtgaagat
      241 cgtcatgacc tatgccgaag agttgtcggc aagcaatccg gcgcacccca cggtgattac
      301 gatccgcagc ggcgtgaagc gcgatggccg gatcgtcgct cgcaagatgc gcgcggtgca
      361 cgccagtggc ggctatggtg cgctcaagtc caatacgtcg ctcgcgactt ggcactatgc
      421 cggcggacaa tatcgcatcg atcacgcgga tatcgagttc atgcagattt acaccaatac
      481 cgttcccggc ggttactacc gcagccccgg cgcggtggcg acggcgttcg cggtggactg
      541 ccacaccgat atcatcgcca aggaattgaa aatggacccg gctgagtttc gcatgaagaa
      601 ttttcttaac gaaggcgaaa ccgacgccgt cggtcaagca ttgcaggacg tgcgctttcg
      661 cgaggtgttg caaggcgcgc tcgatgccgc cggttggaaa aaaccgaaga agcgcaatca
      721 tggccgcggc atcgcgctct ccggccgtca tatcagcggc ggcgacaccg gcgtgattct
      781 tagcgccgag gcggatgaca gttatttaat tatcagcccg agcatcgatc aaggctcggg
      841 cacgcatacc atcttgcgcc aactggtcgc cgatcgaatg aaagtcggta tcgatcaggt
      901 tcgcgtcgac atcggtgaca ccgacacggc gccgcgcgac ggcggcatgc gcgcgagccg
      961 catgacctat gttgccggca acgccatggt caaagcctgc gaccagctgc gcgagcaact
     1021 actcagccaa gcggcgcgca tgttggagtg ccgcgcggat gaaattgatt tcgacggccg
     1081 gcgattttca ctgcgccatg accgcggcca gcaggtcgcg ttgcggcgcg tcgtcgcgca
     1141 atccaccgag ccgctgaagg ttaccgtcta cgaagactat cgcgctcccg acgaggtttc
     1201 ttacatctgc gctcaggtcg cggaagtcga agtcgatccc gagaccggcg cggtgaaact
     1261 gcatcgcatg gtcaccgcac acgatgtcgg cacgatcatc aacccgacgg cgcaccaggg
     1321 tcagatcgac ggcgccgcgg tgatgggcgt cggccagggg ctgatggaag agatcgtcat
     1381 ggaccaaggc cgggtgacaa ataacaatct gggcgactac aaactgccgt cggtcgccga
     1441 tatcttcgaa ttggaaaccg tgttggtggc gtcggaaggc ggcgtcggcc cgcacaacgc
     1501 caagcccatc ggcgagttcg ccaacaacgc gccgccggcg gccatcgcca acgccatcgc
     1561 cgacgcggtg ggcgtacggc ggttcgagtt gccggtcaag gcggagaatg tctatcaagc
     1621 gttgaaacag aaatgatttc aacttgagc
//
LOCUS       DATIRS010001021         1529 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1750429, whole genome shotgun sequence.
ACCESSION   DATIRS010001021 DATIRS010000000
VERSION     DATIRS010001021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1529)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1529)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1529
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1750429"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            62..1177
                     /locus_tag="VLM90_12955"
     CDS             62..1177
                     /locus_tag="VLM90_12955"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSQ13928.1"
                     /translation="MSAPAKILVVDDTEMNRDMFSTLVEADGHKALLAENGRIGLEML
                     KAEPFDLVLLDVMMPEMNGYQVLEQLKADESLRAIPVIVLSALDEIGSVVRCIELGAE
                     DYLPKPFDPVLLRARIGACLEKKRLRDQEVQLRRELAEWNRTLEGRVQEQVRQLERLE
                     RLKRFFSPQLAELIVSGGAEDPLKTHRREITVVYLDLRGFTAFAETAEPEEVMNVLRE
                     YHAAMGQLIGEHEGTLEHFAGDGMLIFFNDPTPIPNPAEQAVRMALAMRERVKELTVK
                     WRKLGYELGFGVGIAQGYATIGAIGFEGRWEYGAIGTVPNLAARLCGEAKPGEILVPQ
                     RLLGTVEELVEAEPAGELSLKGFHRPVAAYNIVRLKD"
BASE COUNT          328 a          440 c          442 g          319 t
ORIGIN      
        1 ttcgcgcctt agcgccttgg cgagaggtaa tccgaatccg gcttcttagt tgagtctgaa
       61 catgagcgct cctgcgaaaa tacttgtggt cgacgacacc gaaatgaatc gggacatgtt
      121 ttccacgctg gtcgaggcag atggccataa agcgctcctt gcggaaaacg gccggatcgg
      181 tttggagatg ctcaaggcgg aaccgttcga tctcgtcctg ctcgatgtca tgatgccgga
      241 aatgaacggc tatcaagtcc ttgaacaatt gaaggcggat gagagcctcc gcgccattcc
      301 ggtgatcgtg ctctccgccc tcgacgagat cggcagcgtc gtgcgctgca tcgagctcgg
      361 cgcggaagac tatttgccca agccgttcga tccggttttg ctgcgcgccc gcatcggcgc
      421 ctgcttggaa aagaaacggc tgcgcgacca ggaagttcag ttgcgccgcg agttggcgga
      481 gtggaaccgg actcttgaag ggcgcgttca ggagcaagtc aggcaactgg aacgattgga
      541 acgtttgaaa cgattttttt ctcctcaact cgccgaacta atcgtcagcg gcggcgccga
      601 agacccgctc aaaacccacc ggcgagaaat taccgtggtc tatttggact tgcgcggctt
      661 caccgctttc gctgaaaccg ccgagcccga agaggtcatg aacgtgctgc gcgaatatca
      721 cgccgccatg ggacaactga tcggcgaaca cgaaggaacc ctggaacact tcgccggcga
      781 cggcatgctg atattcttca atgatccgac gccgattcca aatcccgccg agcaggccgt
      841 ccgcatggcg ctggcgatgc gcgagcgcgt caaggaattg acggtcaaat ggcgcaagct
      901 cggctacgag ctcggtttcg gcgtcggcat cgcccagggt tacgccacca tcggcgccat
      961 cggcttcgaa ggccggtggg agtatggcgc catcggcact gtgcccaacc tcgcggcgcg
     1021 gctgtgcggc gaggccaagc cgggagaaat cctcgtaccc cagcgcctcc tcggcacggt
     1081 tgaagaactg gtcgaggccg agccagccgg cgaattatct ctcaagggct ttcatcgccc
     1141 cgtcgccgcc tacaatattg tgcggctcaa agactagaac ggaaaatatt tctttcccgg
     1201 attcggattt tatcccgcca aggcgcaaag gcgcaaagtg acaggccaga gcctgtcatc
     1261 ccgagcgaat gcgagggatc taagaaggat ttctctctcc gttcgaaatg acaatgttca
     1321 cccttggcgt cttgcgcctt ggcgggagat acttcttctc cgtatcgatg agccgtagtt
     1381 aaccggagaa atctttacgt agaattttgc caccagtatg ttaatattgg catcacactt
     1441 cgatgagcgg aaaatccatt ccaaccgagt tgtcgccgac cgcttccctg gccgggcggc
     1501 tgttcgggtt ccttaacttc aagcggcta
//
LOCUS       DATIRS010001022         1768 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_77658, whole genome shotgun sequence.
ACCESSION   DATIRS010001022 DATIRS010000000
VERSION     DATIRS010001022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1768
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77658"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..1671)
                     /locus_tag="VLM90_12960"
     CDS             complement(139..1671)
                     /locus_tag="VLM90_12960"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSQ13929.1"
                     /translation="MSVLNFPSPALPCRPNDDAAGDVVQFLLDALPSGALLTDGQGKI
                     LMLNQHAERLLGWPAAKLIGQPAHEWFDCYLEELTAKPENCPIARTLQGENIGSPGRM
                     WLSCRGAVAKPVEYRCSRYSTGGGMGAILTFNDITRELAVEKDLRSLASIAEACPLAI
                     VELNEDANLIHANPVMMSLMDRFGFGAGLHAAVLPENIEALTVDCIAGLNEIGPIEVN
                     VGDHCYEWKLVPVAGERIVRGYGVDLTARKRIEIALARAKIEAESATHAKSELLANMS
                     HELRTPLNGVIGMAELLAESELTDDQRDCAETIQTCAASLMGVIEELLTMADLAGGRS
                     TAEPSVFDLGPCLQEVSESYRGLAQQKGLRFTLSIAPDLPARVRGDRTRLKQVLHRLL
                     ANALKFTAQGEIRVDVGGMVPSARGVRFGAGPEIALEGAVCFAIVDTGVGIAAEKQAV
                     IFERFVQADGSCTRNFGGTGLGLAIAKELVESMGGAIGVESEPGKGSSFWFTVPLPAS
                     GS"
BASE COUNT          372 a          549 c          500 g          347 t
ORIGIN      
        1 aatttgtcgg ggcaaggcgc gcattaccgt cctatcgaac ccttcttgat ctttttgttg
       61 ttaatccgga taaacgatcg agagcgtgag acactgcact tgagtgccgc gagaaaggtg
      121 gtgccgccgt gaccaatttc acgaaccgct ggcgggcagc ggcaccgtga accaaaaact
      181 gctgcctttc cccggctcgc tctcgacacc gatcgctccg cccatggatt caaccagctc
      241 tttggcgatc gctaagccga gacccgtgcc gccgaagttc ctggtgcacg aaccatctgc
      301 ctggacgaaa cgctcgaaga tgaccgcttg cttctccgcc gcaataccga caccggtgtc
      361 gacaatcgcg aagcaaaccg caccttcaag cgcgatctca ggaccggcgc cgaagcgcac
      421 gccacgcgcg cttggcacca taccgccgac atcgacgcgg atttcaccct gtgcggtgaa
      481 cttgagcgca ttggcgagca agcggtgcag cacttgtttt aggcgtgtgc gatcgccacg
      541 cacgcgagcc ggcagatccg gtgcaatcga tagggtaaac cttagcccct tctgctgcgc
      601 caagccgcgg taagactcgc tcacttcttg caagcatggg ccgaggtcga agaccgatgg
      661 ctcggcagtc gatcgccccc ctgccaaatc cgccatggta aggagttcct cgatgacacc
      721 catcaaggat gccgcgcagg tttgaatcgt ttctgcgcag tcgcgctggt cgtcggtcaa
      781 ttcgctctcg gccaataatt ccgccatgcc gatgacgccg ttcaacggcg tacgcagttc
      841 atggctcatg ttggcgagga gttccgactt ggcatgggta gcggactcgg cttcaatctt
      901 ggcgcgtgcc agcgcaatct ctatgcgctt gcgcgcggtc aagtcgacgc catagccgcg
      961 gacaatccgt tcgccggcca ctggcacgag cttccactca taacaatgat cgccgacgtt
     1021 gacttcgatg gggccgattt catttagtcc ggctatacag tccaccgtca atgcttcgat
     1081 attttcgggc aacaccgcag catgcaggcc ggcgccgaag ccaaatcgat ccatcaaact
     1141 catcatcacc ggattggcgt ggattaggtt ggcgtcctcg ttgagttcga cgatggcgag
     1201 gggacaggcc tccgcaatgg atgccagact gcgcaaatcc ttctcgactg ccagttcgcg
     1261 cgtgatgtca ttgaaagtca agatagcgcc catgccgccg ccggtagaat agcgcgagca
     1321 acggtactcg accggcttcg cgaccgcacc acggcaggaa agccacatgc gccccgggga
     1381 tccgatattc tcaccctgga gagtgcgagc tatcggacaa ttttccggct tggccgtaag
     1441 ctcctccaaa tagcaatcga accactcatg ggctggctgg ccgatcaatt tcgccgccgg
     1501 ccaaccgagt aaacgctcgg cgtgctgatt gagcatgagt attttgccct ggccatcggt
     1561 gagcaacgcg cccgacggca gggcatcgag caagaactgc acaacatcgc cggcggcgtc
     1621 atcgttagga cggcaaggca acgccggact ggggaaattg aggacgctca tgccaacgct
     1681 cctggcgcca atcgcataaa aaccagtgga tcgatgcgct ccttgacagg gtcgagcacg
     1741 gcgacgatgc gacgttctat ggcgtcct
//
LOCUS       DATIRS010001023         1771 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1553831, whole genome shotgun sequence.
ACCESSION   DATIRS010001023 DATIRS010000000
VERSION     DATIRS010001023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1771)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1771)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1771
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1553831"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(246..>1771)
                     /locus_tag="VLM90_12965"
     CDS             complement(246..>1771)
                     /locus_tag="VLM90_12965"
                     /inference="COORDINATES: protein motif:HMM:NF014868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13930.1"
                     /translation="NSSYPTSEIAANAHAFRELGMGYANLGALLMTLGLPYDSDGGRA
                     YAAAVTALMSGQGYLQSARNAAATGTFAGYEVNRQPMLRVLNKHRSQAYKISPSHVPL
                     DLLTAAREAWDQTCTEAEKFGVKNSQISVLAPTGTIAFMMDCDTTGVEPDIALVKYKK
                     LVGGGLLKMVNHTVPRALKRLGYDVKQIQDIIEYIEEHDTIEGAPHLRDDDLPVFDCA
                     FKPANGSRSIQYMGHVRMMGAVQPFISGAISKTINMPTDASVDDIVHAYMESWKLGLK
                     AVAIYRDGSKRTQPLNTAKDKEEKKTGTGESREPQVLRHRLPDERRSITHKFDIAGHE
                     GYIIAGMYEDGQPGEIFITMSKEGSTISGLMDSFATAISIALQYGVPLRGLVDKFSPM
                     RFEPSGFTKNPDIPMAKSIMDYIFRWLASKFLDGEAQQEVGIVQRQEPTEPMPQSNKI
                     VSLAAHAPRGGAPVASISSVTSLYQQEAPPCPDCGAIMIRSGACYKCMNCGAVSGCS"
BASE COUNT          344 a          504 c          523 g          400 t
ORIGIN      
        1 gtcaactacg ccatccgcca cggcctggcc aagtcggatg gcgattaggc ttggcgggta
       61 atggagtgag gcaaggatcc tctaaatgca gttttttgtc ttgaatggaa aaactagagc
      121 catttctgaa ttccatacag attatagatt tgtgctgacc tgcagttctc tgcatcaaag
      181 ctacaacggg ccggccgaat atcttcgacc ggcccgtttt tttctagcgt atgtacttca
      241 acaactcacg aacacccgct caccgcgccg caattcatgc acttatagca agcgccgctg
      301 cgtatcatga tcgcgccgca gtccgggcaa ggcggcgctt cttgttggta gaggctggtg
      361 acgctgctga tgctcgccac cggcgcgccg ccgcgcggcg cgtgggccgc caatgacacg
      421 attttattac tctgcggcat cggttccgtt ggctcttgcc gctgaacaat ccccacttcc
      481 tgctgcgctt cgccgtcgag gaacttgctc gctagccagc gaaagatata gtccatgatc
      541 gatttggcca tcggaatatc ggggtttttg gtgaaacccg agggttcgaa acgcataggg
      601 ctgaacttgt cgaccaatcc cctgagcggc acgccgtatt gcagcgcgat ggaaatcgcc
      661 gtggcgaagg agtccatcag accggagatc gtcgagcctt ctttcgacat ggtgatgaag
      721 atctcgccgg gttggccgtc ttcatacatg ccggcgatga tgtagccctc atggccggcg
      781 atgtcgaact tatgggtgat cgagcggcgc tcgtcgggca acctgtggcg cagcacctgc
      841 ggctccctgc tctccccggt gccggtcttt ttctcttctt tgtcttttgc agtgttgagc
      901 ggctgggtgc gcttggaacc gtcgcgataa atcgccaccg ctttgagtcc cagcttccaa
      961 gactccatat aagcgtggac gatatcgtcg acgctggcat cggtgggcat gttaatggtc
     1021 ttggagatag cgccggagat aaacggctgc accgcgccca tcatgcgcac gtggcccata
     1081 tactgaattg accggctgcc gttggcgggc ttgaaagcgc agtcgaatac cggcaaatcg
     1141 tcatcccgca aatgcggcgc cccctcgatg gtgtcatgtt cctcgatgta ctcaatgatg
     1201 tcttggatct gtttgacatc gtagccgagc cgcttgagcg cccgcggcac ggtgtgattg
     1261 accatcttca acaagccgcc gccgaccaat tttttatatt tgaccagtgc gatgtcgggc
     1321 tcgacgcctg tggtatcgca atccatcatg aaggcgatgg tgccggtggg tgccaagacc
     1381 gagatctgcg aattcttgac gccgaacttt tcagcttcgg tgcaggtttg atcccaggct
     1441 tcgcgcgccg cggtgagcag atcgaggggc acatgcgacg gcgagatctt gtacgcctgg
     1501 gagcgatgct tgttgagcac gcgcagcatc ggctgacgat tgacctcgta gccggcgaag
     1561 gtgccggtgg ccgcggcgtt gcgcgccgat tgcagataac cctgccccga catcaaagcg
     1621 gtgaccgccg ccgcataggc gcgcccgcca tcggaatcgt agggcagacc gagcgtcatc
     1681 agtaatgcac ccaaattggc gtagcccatg ccgagctcgc gaaacgcatg ggcgttggcg
     1741 gcgatctcag aggtcggata ggacgagtta t
//
LOCUS       DATIRS010001024         2827 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_668503, whole genome shotgun sequence.
ACCESSION   DATIRS010001024 DATIRS010000000
VERSION     DATIRS010001024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2827
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_668503"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..668
                     /locus_tag="VLM90_12970"
     CDS             <1..668
                     /locus_tag="VLM90_12970"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ13931.1"
                     /translation="SWLWRDPAAENIAVAEANRGAATPDGPLNVWALLPISCATAIYL
                     IGQMALITYVPLYLKDAMGFSSYWASQALALTQAGAMIGRVGWGIVSDRIFAGRRKIV
                     LIWIGVLSVILFTALSLMGRDSSYFILMAILFLSGVCIVGYQGVSYALIGEIAGKAKT
                     GTGLGMMITINAGAATLGTPLFGYIVDRTGSYPIAWQVLAAGIAVGMLAMATLLKETA
                     RTS"
     gene            complement(735..1556)
                     /locus_tag="VLM90_12975"
     CDS             complement(735..1556)
                     /locus_tag="VLM90_12975"
                     /inference="COORDINATES: protein motif:HMM:NF024587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidylate kinase family protein"
                     /protein_id="HSQ13932.1"
                     /translation="MQIITIYQGASGSGEELADGVAQALGYGPVDREVLVQASLQYGI
                     PESKLNEIVEREPSWWATFTRNLDPYRIALQAAFCEIARDHGIVYHGHLGHELIPKFQ
                     HVLKVLLTAPMQMRVEQVRARHKLNEIAARRYVDEVDKARTRRLQGMFGADWRDASRY
                     DLVVNLGHMSVATAKQLIVAAAHAPDYQMTQASKQAFENFALASRVRATLALAEDLSQ
                     VRVEIKVNEGDIIVSGTVPEWITARQVVTHIEAIPGIKHVQADLTTLPSSLGMTS"
     gene            complement(1610..2098)
                     /locus_tag="VLM90_12980"
     CDS             complement(1610..2098)
                     /locus_tag="VLM90_12980"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: protein motif:HMM:NF025793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0052717 - tRNA-specific adenosine-34
                     deaminase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HSQ13933.1"
                     /translation="MIEADHRYLRYALMVAERAREHGDRPFGAVLVSNRGRILVEAEN
                     AKHATHDCTSHAETRLLAQASRQFPRHLLVHCTLYVNAEPCPMCAGAIFWSGVGRVVF
                     GLSNARLRQLVGQRSEQLFEHCAEVLARGTHSVEVVGPLFEEEAAQAFREGLVLPTVL
                     AQ"
BASE COUNT          532 a          847 c          810 g          638 t
ORIGIN      
        1 tctcatggct gtggcgcgac ccggcggctg aaaacatcgc ggtcgccgaa gctaaccgtg
       61 gcgccgcaac ccctgacgga ccactgaatg tttgggcgct gttgccgatt agctgcgcga
      121 cggcgattta tttgattggc cagatggcgc tgatcactta cgtgccgttg tatctgaaag
      181 acgccatggg gttttcatct tactgggcga gccaggccct cgccctcacc caggcggggg
      241 cgatgatcgg acgggtcggt tggggcatcg tcagcgaccg gatcttcgcc ggccgacgta
      301 agatcgtgct gatatggatc ggtgtattgt cggtgattct cttcacggcg ttaagtttga
      361 tgggacggga ctcctcctac tttatcctca tggcgatctt gtttctctcc ggtgtatgca
      421 tcgtcggtta ccaaggcgtt tcctacgcgc tcatcggcga gatcgccggc aaggccaaga
      481 ccggcaccgg gctcggcatg atgatcacca tcaatgccgg cgcggcgacg ttgggcacgc
      541 cccttttcgg ttacatcgtc gatcgcaccg gctcctatcc gattgcctgg caagtcctcg
      601 ccgccgggat cgccgtcggc atgctcgcca tggcgaccct gctcaaagag actgcgcgca
      661 cgagctagcg cgccggggtt ttccgagcca gttgcttgat atcggcgtcg gcagttttct
      721 agtaaccgca cttttcaact ggtcattccg aggctggacg gcagcgtcgt gaggtccgcc
      781 tgcacatgct tgatgccagg aatcgcttca atgtgggtga cgacttgccg tgcggtaatc
      841 cattccggca cagtgccact aacaataata tcgccctcat tgactttgat ctcgacccgc
      901 acctgggaca ggtcttcagc gagcgctaag gtggcgcgaa ctcgcgatgc cagcgcaaag
      961 ttttcaaacg cctgcttcga tgcttgggtc atctgatagt ccggcgcgtg ggccgcagcc
     1021 acgatcaact gctttgccgt cgccacgctc atatggccaa gattgaccac caaatcgtag
     1081 cggctggcat cgcgccaatc ggcgccgaac atgccttgca gccggcgcgt gcgcgccttg
     1141 tcgacttcgt cgacgtaacg ccgcgcggct atttcattga gcttgtggcg cgcgcgcact
     1201 tgctcgacgc gcatttgcat cggtgccgtg agcaaaactt tgagaacatg ctgaaacttg
     1261 gggatgagtt catggcccag atgaccgtga tagacgatgc catgatcgcg ggcgatttcg
     1321 cagaacgccg cctgtaacgc gattcgataa gggtcgagat tgcgcgtgaa ggtcgcccac
     1381 cagctcggtt cgcgctcgac gatttcattg agtttggatt cggggatgcc gtactgcaaa
     1441 cttgcctgaa ccagcacttc gcggtcgaca gggccgtaac ccaacgcctg ggccacaccg
     1501 tcggccaact cttcgccgct gcctgaagcg ccctgataga ttgtgatgat ttgcatggtc
     1561 cctccccgtg tgattgcgcg aaccgtaaac gcctgtcgtt acgctaaaat cactgtgcca
     1621 gaactgttgg caagacgagc ccttctctaa acgcctgggc cgcctcttct tcgaacaagg
     1681 gtcccaccac ttcgaccgag tgcgtgcctc tggcgagtac ctcagcgcag tgttcgaaca
     1741 gttgctccga tcgctggccg accagctgtc tcagacgggc gttgctgaga ccgaagacga
     1801 cgcggcccac gccgctccag aatatcgccc cggcgcacat cgggcagggc tcggcattta
     1861 cgtagagcgt gcaatggacc agcaggtggc ggggaaattg ccgcgacgcc tgggcgagca
     1921 gcctggtttc ggcgtggctc gtgcaatcat gagtggcgtg tttggcgttt tccgcctcga
     1981 ccaaaattct gccgcgattg ctcaccagca ccgcgccaaa cggccggtcg ccatgttcgc
     2041 gggcacgttc ggcgaccatc aaggcatagc gcaggtaacg atgatccgct tcaatcatga
     2101 tcttctcccc aaacgattgc tagctatatg acccgcacca ttgccggacc gaaattgaat
     2161 gacgcggcta agaatgacaa gggcgtcctt cacggaagga cgcccttgcg gcgcgtttcg
     2221 cgcgcttaac tgcgctattt aatttgccct tactcccgct gccaacggtt cgatgggctt
     2281 gatccggaac gcactcacgt gagtgacctc cgcgtgtcat actacctacg accttcctca
     2341 ctatgtcgct aaagcgacga tttgccttca ggcaatttag ttgaggtccg gttagttaac
     2401 gccgctgcgt gagacgggta gaggtccggg tcgggagccg cccgcaaaca gcgggcatac
     2461 gtggttcggt ggatttccgt cttgcatagc aaagacctcc tttcacacct tggggcttca
     2521 ctgcattatg caactcactc gcccctacgc ctggcggcgt tcagtgaatc tgctatcgct
     2581 ctacgactgc gcggtgacaa tgtcaagagc aaaattattg ctatgacaac tcgcctcacc
     2641 gttggccccg ccgtgccatg acccactgcg ttgacttcaa gacgtggcgg agctttactt
     2701 tttgtcagtt cctactgaga gtggctaacc ggaggagtta tgcaacgtaa gttttttttc
     2761 tgttgccttg ccttgctgtt gatcgtcgcc atcccagcgc agagcgccga accggaacgg
     2821 tcgaagc
//
LOCUS       DATIRS010001025         6007 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1750615, whole genome shotgun sequence.
ACCESSION   DATIRS010001025 DATIRS010000000
VERSION     DATIRS010001025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 6007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6007
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1750615"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..904)
                     /locus_tag="VLM90_12985"
     CDS             complement(<1..904)
                     /locus_tag="VLM90_12985"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ13934.1"
                     /translation="MADLLQVKNLQTSFFTPEGEVRAIDGVSFEIAEGKTLGLVGESG
                     CGKSVTSLSIMRLIQSPPGKIVGGEIIYRGKDLLKLGNEEMRKIRGNEISMIFQEPMT
                     SLNPVFTVGNQIGEAIKLHQGLDKQATRAKTIEMLRLVKIADPESRVDAYPHQLSGGM
                     RQRVMIAMALSCNPSLLIADEPTTALDVTIQAQILDLMKELQQKIGMALLLITHDLGV
                     VAEQADNVAIMYAGKMVERSNTREIFTKPFHPYTVGLLNSLPSTGSAKKHRLDAIPGV
                     VPNPLHLPSGCRFRDRCPKAAELCA"
     gene            complement(1029..1244)
                     /locus_tag="VLM90_12990"
     CDS             complement(1029..1244)
                     /locus_tag="VLM90_12990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13935.1"
                     /translation="MGVCRSFLPSRAAKLSTPIRPRRAITAEAVLSFLSLGVDPTVPI
                     WYGKLRRAALTYSSNRICCCFPDYSSW"
     gene            1533..2714
                     /locus_tag="VLM90_12995"
     CDS             1533..2714
                     /locus_tag="VLM90_12995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13936.1"
                     /translation="MAIDRHPTVRRAAEITPGNIHSARQILAQNDPREPAYRTRQSLT
                     LNQRDLDLAANYLAYFYANGGARLTVSDGRIDLTASLRPPKAPVIFYFNIGAILSGGR
                     SALQFEELRIGQLPLPGFVGNWLIKLIGAQLIGKDAYDMINAAIKRVEIRNGQIVVGY
                     EWPALSTGQLTAAVISAEDQERLRIYQERLALINSSPKTRNVPLAELSVALFELATFR
                     SQQFSAVGENRAALVVLAFYVNGKSLGRLLPAAKSWPQPTEQIVTLNGRDDFAKHFIV
                     SAALAASAGSPLADAVGLYKEIADSRAGSGFSFSDIAADRAGTRFGELAAGITSAKKF
                     QQRLSGGIAEKDIMPATADLPELMPEAEFKRRFGGVNGVEYKKMMGQIERRVAALPLY
                     R"
     gene            complement(2883..3086)
                     /locus_tag="VLM90_13000"
     CDS             complement(2883..3086)
                     /locus_tag="VLM90_13000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13937.1"
                     /translation="MLQSIVAMAVVACGACSNAATPVRKAVIGHATLTNKLGHDVVAG
                     PNIKTAKELRGLSSLNNELGDDA"
     gene            complement(3120..3890)
                     /locus_tag="VLM90_13005"
     CDS             complement(3120..3890)
                     /locus_tag="VLM90_13005"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSQ13938.1"
                     /translation="MKLKDQVALITGAGRNIGKSMAKLFAAEGAKIVVAEMHEGRGQA
                     VVDEITQSGGQAALVLGDVSKSADVRRLVKEAVGKFGGIDILVNNAALTDHANIFDST
                     EEEFDKVIAVSLKGPYLVTKYVAMEMKNQGRGGKILNFGSTSGLVGRFDGIAYAAAKA
                     GVINMTRAMAVQLAEYGIRVNCVVPNRSGSPVGYDDDVAGSRTFQNLAGRLGTADDQA
                     KAALFLVSDDSSFIIGHPLIVDGGVMATANFPREQFQK"
     gene            complement(3986..5626)
                     /locus_tag="VLM90_13010"
     CDS             complement(3986..5626)
                     /locus_tag="VLM90_13010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13939.1"
                     /translation="MAKKRSARRQAAPVAAAVAPRPIGALFQVCLTVALLAVYAGFLA
                     HPVDLTTSDLGRYLKNGELFFQRGLIADTNLFAYTTPDHPFVNHSWGSGAIYYVVERT
                     LGFAGLSLFFLTVSVTTLWIFFRLAVRYGSFALGAVLTVIVMPILITRSEIRPEMFSY
                     LMSGLFLHLLWDYRQGQRGARWLMILPLLQIVWVNLHIYFFLGMFLVGVVLLQSLIDL
                     AAQSSPRASSQRQPWKVLTAVAVATVAASCINPAGWRGAVYPLFIFQGYGFPVIENYS
                     VPAILQAGFQFLPLTFFLVILGLLCLSWLYVIIKDRSSFSVSNFVLTLFFAALAWWSI
                     RNFVIFAFFALPLTAANFHSMVRAQSSRWLNSYCGTMATVTGVAVLLLLINPAFFFAG
                     ERGAFGIGLKEGNLAALEFFRSERLQGPLFNTFDVGSYLTYGLYPRERVYVDNRPEAY
                     PATFFTEDYFPLLVNEEKWRSHLAAHKFNSIVINPGGHSAAAENFVIQRMLDPDWAAV
                     FFDKEILILARRFGPNQPVIAKYELPREAVLQKAEGGK"
     gene            complement(5769..>6007)
                     /locus_tag="VLM90_13015"
     CDS             complement(5769..>6007)
                     /locus_tag="VLM90_13015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13940.1"
                     /translation="QKQGAETFSSEDAQLVRFVREIIHDHRVSEPTFQAIHGRFGDKG
                     MVELSATIGYYAMLACTLNTFDVYTVTPPDDLKI"
BASE COUNT         1344 a         1786 c         1699 g         1178 t
ORIGIN      
        1 gagcgcaaag ctcggccgcc ttgggacaac ggtcgcggaa gcggcagccg ctcggcaggt
       61 gcagcggatt cggcaccaca ccgggaatcg cgtccaagcg atgttttttg gcgctgccgg
      121 tgctcggcaa agaattgagc aggcccaccg tgtaagggtg aaacggtttg gtgaaaatct
      181 ctcgcgtgtt cgagcgttcg accatcttgc cggcgtacat gatcgcgaca ttgtcggcct
      241 gctcggcgac cacgccgagg tcgtgggtga tcagcagcag cgccatgccg atcttttgct
      301 gcagctcctt catcaggtcg agaatttgcg cttggatggt cacgtcgagc gccgtggtcg
      361 gctcgtcggc gatgagcagt gacggattgc acgacagcgc catggcgatc atcacccgtt
      421 ggcgcatgcc gccgctcaac tgatgcggat aggcgtcgac gcgggactcc gggtcggcga
      481 tcttgaccag gcgaagcatt tcaatggttt tcgcccgggt cgcctgcttg tccaaaccct
      541 ggtgcagctt gatcgcttcg ccgatctgat tgccgacggt gaaaaccgga ttaagcgagg
      601 tcatcggctc ctggaagatc atcgagatct cgttgccgcg gatcttgcgc atctcctcat
      661 tgccgagttt gagcaagtct ttgccccgat agatgatctc gccgccgacg attttcccag
      721 gcggcgactg gatcagccgc ataatcgaca gcgaagtaac gctcttgccg caaccggatt
      781 cgccgaccag accgagcgtc ttgccctcgg cgatctcgaa gctgacgcca tcgatggcgc
      841 gcacttcgcc ttccggtgtg aagaaagaag tctggaggtt tttgacctgg agtagatccg
      901 ccatggtgac aaagtcgcgt ctggattaac tcacgttgta cggcctccgc gcagccgatt
      961 caacatgcgg gggtccaaaa tctcgcgaat tgcatctccc atagcattaa atccccgcac
     1021 tgccaacatc accaggatga gtagtccggg aaacagcagc agatgcggtt ggagctgtaa
     1081 gtcagggctg cccggcgcaa cttgccgtac cagatgggca cagtcggatc gacgccgagg
     1141 ctgagaaagc tcaggaccgc ctccgccgta atcgcccgcc gcggtctgat cggcgtcgat
     1201 aattttgccg ccctcgacgg caaaaacgac ctgcaaaccc ccatcgccga tcgttatatc
     1261 ttgctggagt ccggcaaccc aagtcagcca gagccttccc cagcggccac atgggccaag
     1321 cgcagacttt tccgaccatg gttagctggc tgaaaaccca gctggcttag cgtgctagaa
     1381 ttttcttcgt tgccggcgca ataacattaa aacagttggc ttttgtcgaa gcatgacgta
     1441 aaatttccgg gcatcatgtc atgcgcttat taagcagaat tctcactata ctttcgtacc
     1501 tgctgccgct tgtactggtc gcggccattt atatggcaat cgaccgccac ccgaccgtca
     1561 ggcgtgccgc cgaaattacc ccgggcaata ttcacagcgc gcggcagatc ctggcgcaaa
     1621 acgacccgcg tgaaccggca taccggactc gccaatcact tacgctaaac cagcgagatc
     1681 tcgatctagc cgccaattac ctcgcatact tttacgccaa cggcggcgct cggctcaccg
     1741 tgagcgacgg cagaatcgat ttgaccgcca gcctgcggcc gccgaaggca ccggttattt
     1801 tttatttcaa tatcggcgcg atcctttccg gcggcaggtc agcgctacaa ttcgaggaac
     1861 tacgcatcgg ccagctgcca ctgccggggt tcgttggcaa ttggttaatc aagctgatcg
     1921 gcgcacagtt gatcggaaaa gacgcctacg acatgatcaa tgctgccatc aagcgagtag
     1981 agatcagaaa tggccaaatc gtggttggct acgaatggcc agctttgtca accggccaac
     2041 tcaccgcggc ggtcatttct gcagaggatc aagaacggct gcgtatctat caagaacgtt
     2101 tggcgttaat caacagttcg cccaaaacac gaaatgttcc tctggccgaa ctctccgtcg
     2161 ccctgtttga actcgccaca tttcgctcac aacaattcag cgccgtaggc gagaatcgcg
     2221 ccgcccttgt cgtcctggct ttctacgtca acggcaaatc gctcggccgg ttgttaccgg
     2281 cggccaagag ttggccgcag ccgaccgagc agatcgttac gctcaacggc cgtgacgact
     2341 tcgccaaaca ctttatcgtc tccgccgcgc tcgccgccag cgccggcagc ccgctcgcag
     2401 acgccgtggg gctttataaa gaaatcgccg actcacgcgc tggcagcggc ttttccttta
     2461 gcgacatcgc cgccgaccgt gccggcacgc gctttggaga gcttgccgcc ggaatcacca
     2521 gcgcgaagaa atttcagcaa cggttatccg gcggaatagc tgaaaaagac atcatgcccg
     2581 ccactgccga tctgccggaa ttgatgccgg aagcggagtt caagcgccgc ttcggcggcg
     2641 tcaatggagt cgaatacaaa aagatgatgg ggcaaatcga gcggcgtgtc gcagcgttgc
     2701 cgctctatcg ctgagagtac agtctcgcga caatcgacga tttctctcgt cgcgcgttga
     2761 actaggctcc gtcatgccgg tggaagccgg catccaggtt aagccgtggg gatggacccc
     2821 ggttttcacg gggtgacgat aatccatcat tcccgcgtgc gcgggaatga caaaatggca
     2881 ggctatgcat cgtcaccaag ctcgttattc aacgatgaca atccgcgcaa ttcctttgcg
     2941 gtcttgatgt tcggcccggc cacaacgtcg tgacccagct tgttggtcaa cgtcgcatgg
     3001 cctatcaccg ccttgcgcac cggcgtcgcc gcatttgaac acgcgccgca ggcgactacg
     3061 gccatcgcga cgatcgattg aagcaccagt ctgagcctca acgtttgcaa cggctaactt
     3121 tatttctgaa actgctcccg cgggaaattc gccgtcgcca tgacgccgcc gtcgacgatc
     3181 aacggatggc cgatgataaa actggaatcg tcgctgacca gaaacaatgc ggccttggcc
     3241 tgatcgtcag ccgtgccgag acggccggcg agattttgaa acgtccggct accggccacg
     3301 tcgtcgtcgt aacccaccgg cgaaccggag cggttgggca caacgcaatt gacgcgaatg
     3361 ccgtactccg ccagctgcac cgccatggcg cgggtcatgt tgatcacgcc ggctttggcc
     3421 gccgcgtagg cgatgccgtc gaagcggccg accaagcctg atgtcgagcc aaaattcaaa
     3481 attttgccgc cgcgaccttg gttcttcatc tccatggcga catacttcgt caccagatac
     3541 ggacctttca aactgacggc gatgaccttg tcgaactctt cttcggtgct gtcgaaaata
     3601 ttggcgtgat cggtaagcgc cgcgttgttg acgagaatat cgatgccgcc gaacttaccc
     3661 accgcttctt taaccaagcg ccgcacgtcc gccgacttgg aaacatcgcc caacacgagc
     3721 gccgcttggc cgccggattg ggtgatctcg tcgaccaccg cttggccgcg cccctcatgc
     3781 atctcggcga cgacgatctt cgcgccttcg gccgcgaaca gtttcgccat cgacttgcca
     3841 atgtttctgc ccgcgccggt aattaatgcc acttgatcct tgagcttcat cttcattccc
     3901 cttataaaaa ttgttgcgcg ccctcggccc gcgcaatcgc agcgagccta tccgacgacc
     3961 tgacagcatg tcaactaacg gcccatcact ttcctccctc ggctttttgc agcaccgctt
     4021 cgcgcggcag ttcgtacttg gcgatgaccg gttgattggg gccgaaccgg cgggcgagga
     4081 taagaatttc cttgtcgaaa aacaccgccg cccaatccgg gtcgagcatg cgctggatga
     4141 caaaattttc cgccgccgcg gagtggccac cggggttgat gacgatgctg ttgaatttat
     4201 gagcggccag atggctgcgc cacttctcct cgttcaccaa gagggggaaa taatcctcag
     4261 tgaaaaacgt cgccggatag gcttcagggc ggttgtcgac atacacacgc tcgcgcggat
     4321 aaaggccata agtcaaatag ctgccgacgt cgaaggtgtt gaagagcggc ccctgcagtc
     4381 gctcgctccg gaaaaactcc agcgccgcca gattgccctc tttgaggccg atgccaaagg
     4441 cgccgcgctc cccggcaaaa aaaaatgccg gattgatcag caagagcaga accgccacac
     4501 cagtcaccgt agccatagta ccgcagtacg aattgagcca gcgcgaggac tgcgctcgca
     4561 ccatgctgtg aaagttagcc gccgtcagcg gcaacgcaaa gaaagcgaag ataacgaagt
     4621 tacggatgct ccaccatgcc agcgcggcga agaacaacgt caggacaaag ttgcttaccg
     4681 agaaactaga acggtcttta atgatgacgt aaagccagct taaacagagc aggccaagga
     4741 tgactaagaa aaaagttagc ggcaaaaact gaaagcctgc ctggagaatg gccggcaccg
     4801 aatagttttc gataaccgga aatccatagc cctggaagat aaacagcgga tagaccgcgc
     4861 cgcgccaccc cgccggattg atacaactgg cggcaacggt cgccaccgcg accgcggtga
     4921 gaactttcca tggttgcctt tgggaacttg ctcggggcga actttgggcg gcaagatcga
     4981 tgagcgactg caaaagaaca acaccgacga gaaacatacc gagaaagaaa taaatatgca
     5041 ggttgaccca aacaatctgc aatagcggta gaatcatcag ccaacgcgcg ccacgttggc
     5101 cttgccggta atcccacagc agatgcagga acaggccgct catcagatag ctgaacattt
     5161 ccggtcgaat ttcgctgcgg gtgatcagaa tcggcatgac gatgacggtc aatacagccc
     5221 cgagagcgaa gctgccgtag cgcacggcca agcggaagaa aatccagagg gtggtcacgc
     5281 tcacagtgag aaaaaacagc gagagtccgg caaagcctag cgtacgctcg acgacatagt
     5341 agatcgcacc gctgccccaa gaatgattga cgaacggatg atccggcgtc gtgtaggcga
     5401 aaagattggt gtcggcgata agaccgcgct gaaaaaaaag ttcgccgttc ttcaggtagc
     5461 ggccgaggtc gctggtggtg aggtcgaccg ggtgagcgag aaagccggcg tagacagcga
     5521 gcaaagctac ggtcaggcac acttgaaaga gcgcgcctat tggacgcggc gcaaccgccg
     5581 ctgccactgg agcggcttgc cgccgcgcgg aacgtttctt ggccatgaat cgactaagct
     5641 acgggcagga cggattttat gtcggatcgg tcgcctagcg ctgcctttgc cggctctcgc
     5701 ggcgagatac aggccgtggt cgccgcgtgt cgtcgtcgag agcgacgaca cgcccggcgg
     5761 gctccgggtc agatcttcaa atcgtcgggg ggcgtgacgg tgtagacatc gaaggtgttc
     5821 agcgtgcacg cgagcatggc gtagtaaccg atggtcgcgg acaactcgac catccccttg
     5881 tcgccaaacc ggccgtggat cgcctggaac gtcggctcgc tcactcgatg atcgtgaatg
     5941 atctcgcgga cgaacctgac cagctgggca tcctccgatg aaaaggtctc ggcgccctgc
     6001 ttttggt
//
LOCUS       DATIRS010001026         2420 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_569462, whole genome shotgun sequence.
ACCESSION   DATIRS010001026 DATIRS010000000
VERSION     DATIRS010001026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2420
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_569462"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(171..1214)
                     /locus_tag="VLM90_13020"
     CDS             complement(171..1214)
                     /locus_tag="VLM90_13020"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HSQ13941.1"
                     /translation="MKAIVIRQFGAPEVMRLEDVAEPKAAPGEIVIKVHSVSVNRTLD
                     CVVRAGNYPVTIEMPHVLGVDPAGEVVEVGSGVTRFKIGDRVATISIIRCGQCKQCAR
                     GLEANCLASQHIGLHRWGGYAEYVAVPERNAFKIADNLSYAEGTVITRHYPMAFNLLT
                     GKTQVQAGEWVLVMGATGALGSCCVQVAKMFGARVIAAAGADERVQLAMKSGADFGIN
                     YRSRDLAKTVMQLTDGDGVDIVCESIADPTLWPGAFNSLAIGGRMVTAGAHGGGNVML
                     DAKRLYQRRISILGAAGTNPPDVEQALEAAHAGKIRAIPHRKMALSQAPEAHRIVESN
                     QIIGKIILEPAQE"
     gene            complement(1398..>2420)
                     /locus_tag="VLM90_13025"
     CDS             complement(1398..>2420)
                     /locus_tag="VLM90_13025"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13942.1"
                     /translation="PKMLKTANLQFRLQESTMKKLFLLFVLFGLAPLAGAQTKRIAVA
                     YSAVSATQSSFFVTKEAAIFEKHGLYVDPVYVASGTKVAQAVIAGEFPVALAGGTVVN
                     ATLAGGDIVIIGGLVNVPSFYVYVHPSVKRPEDLKGKAIGITTYGSSTDFSIRYLIKK
                     WGMEPDRDIKVLQMGGQPQIVAAMVGGSVQGGVLSSPANYRAAKAGFQLLTDFKKVGL
                     DYPTVSLVTTKSFIKKDPQTVRRFMMAYSEGVERLYRDKEFTMKVIGKYTKTDDREGL
                     ESAYGFATTFIERPPHLPYKAIETILAQLGEKDPKAREAKPEDFIDPTFYNEMEKTGF
                     FKTIAR"
BASE COUNT          463 a          675 c          742 g          540 t
ORIGIN      
        1 aagccaagcc gccgaagcgc accgcattgt cgagaacaat cagatcatcg gcaagatcat
       61 cctcgaaccg gagaagggat aaaggtaccc cccgcaaaga cgcaaagctc gcaaaggtgc
      121 ggattagttt tcctgaactt agcgtctttg cgcctttgcg ggaaattttc ctattcttga
      181 gctggttcca gaattatctt gccgatgatc tggttgctct caacgatgcg gtgcgcctca
      241 ggggcttggc ttaaagccat tttgcggtgc ggaatcgctc tgatcttgcc ggcgtgagcg
      301 gcttctaagg cttgctccac gtcaggcgga ttggtgccgg cggcaccgag gatgctgatg
      361 cggcgctggt acaagcgctt ggcgtccaac attacgttgc cgccgccgtg ggcgccggcg
      421 gtgaccatgc ggccgccgat ggcgaggcta ttgaacgcgc caggccacaa ggtcgggtcg
      481 gcgatgctct cgcagacgat gtcgacgccg tcgccgtcgg tgagttgcat taccgttttg
      541 gcgagatctc gcgagcgata gttgatgccg aagtctgcgc cgctcttcat cgccagttgg
      601 actctctcat cggcgccggc ggcggcgatc actctggcgc cgaacatttt cgccacctgg
      661 acgcagcaac taccgagcgc gccggtggcg cccatgacca aaacccattc gccggcttgg
      721 acctgggtct tgccggtgag caggttgaac gccatcggat agtggcgggt gatgacggtg
      781 ccttcggcgt agctcaagtt gtccgcgatc ttgaaggcgt tgcgctcggg tacagcgaca
      841 tattcggcgt agccgcccca gcgatgcaga ccgatatgct ggctcgcgag acaattggct
      901 tcgaggccgc gcgcgcattg cttgcactgg ccacagcgga tgatcgaaat cgttgcgacg
      961 cgatcgccga ttttgaagcg ggtgacgccg ctaccgactt cgaccacttc tcccgccgga
     1021 tcgacgccga gaacatgggg catctcgatg gtcaccggat aattgccggc acgcacgacg
     1081 caatcgaggg tgcggttgac cgacaccgag tggactttga tgacgatttc gccgggcgcg
     1141 gctttgggct cggcgacatc ctcgaggcgc atgacttcgg gggcgccgaa ctgtctgatg
     1201 acgatggctt tcatcttacg tgtagcttgc aggtttacgg agcaccattc tcaccacgaa
     1261 ggcatccttc gcctgtgctc aggacaggct ccggacacga aggtttcgga aaataatcaa
     1321 tccgaacttc gtgctcttcg tgtcctcgta gtgcgacggc cggtagatgt cttaagacat
     1381 aatcctcggt tgcagcgtta gcgcgcgatg gttttgaaga aaccggtttt ttccatctcg
     1441 ttgtaaaagg tcgggtcgat gaaatcttcc ggcttggctt cgcgcgcttt cggatccttc
     1501 tcaccgagtt gcgccaagat cgtctcgatc gccttgtagg gcagatgagg cggtcgttcg
     1561 atgaacgtgg tggcgaagcc gtaggccgat tccaaacctt cgcggtcgtc ggttttagtg
     1621 tacttgccga tgactttcat ggtgaactct ttgtcgcggt agagccgctc gacgccttcg
     1681 ctataggcca tcatgaagcg gcgcacggtc tgcggatctt tcttgataaa cgacttggtc
     1741 gttaccagac tgactgtggg atagtcgagg ccgacttttt tgaaatcggt gagcagctga
     1801 aagccggcct tggccgctcg ataattggcc ggcgatgaca gcacgccgcc ttggacgctg
     1861 ccgccgacca tggcggcaac gatctgcggc tggccgccca tttgcaaaac tttgatatcg
     1921 cggtcgggct ccatgcccca cttctttatt aaatagcgga tggagaaatc ggtggacgag
     1981 ccgtaggtgg tgatgccgat ggctttgcct ttcaaatctt ccggccgttt aaccgatgga
     2041 tggacataga catagaacga cggcacgttg accagaccgc cgatgataac aatatcgccg
     2101 ccggcgagcg tcgcgttgac cacggtgccg ccggccagcg ccacgggaaa ttcgccggcg
     2161 atgaccgctt gcgccacttt cgttccgctg gcgacgtaga ccggatcgac gtacaaaccg
     2221 tgcttttcga aaatggccgc ctctttggtg acgaagaacg acgactgggt ggcgctgacg
     2281 gcgctgtagg cgacggcgat gcgtttggtc tgggcgccgg ccaacggcgc taggccgaac
     2341 aggacgaata gtaggaacag tttcttcatc gtcgactcct gaagacggaa ctgcaagttg
     2401 gctgttttta gcattttcgg
//
LOCUS       DATIRS010001027         1511 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1160974, whole genome shotgun sequence.
ACCESSION   DATIRS010001027 DATIRS010000000
VERSION     DATIRS010001027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1511
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1160974"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..504
                     /locus_tag="VLM90_13030"
     CDS             <1..504
                     /locus_tag="VLM90_13030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13943.1"
                     /translation="SHFWALLFLVLARSDHSAGAVIDLVTLASLPPALRESFEKSPQA
                     KRYAFSAHINPFYLHGDFDGDGEPDTAVLIKDHATGKSGIAIFHGKANRLVIVGAGRG
                     LGNGSDDFSWLDAWHILRRGPVRQGADDKPPPKLRGDGIMVVKTESASALIYWDGKRY
                     GWYQQAD"
     gene            479..1015
                     /locus_tag="VLM90_13035"
     CDS             479..1015
                     /locus_tag="VLM90_13035"
                     /inference="COORDINATES: protein motif:HMM:NF019468.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1648 domain-containing protein"
                     /protein_id="HSQ13944.1"
                     /translation="MAGISRQTDVRRDEGSGALVTLICLAVFAVVFVIYTTRYLPDPV
                     ATHFGGDNRANGWMSREGYLLFMLAFMIGISTLVSFAVGTLPRKFPQWTNVPNRDYWL
                     APARLDDSLRYLSAHGKRLGCLIIMMMLGMHYVILKANHIQPPMLPVPTFSAVLFGFA
                     LALIWWIVRLYRRFPRKG"
     gene            1056..>1511
                     /locus_tag="VLM90_13040"
     CDS             1056..>1511
                     /locus_tag="VLM90_13040"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: protein motif:HMM:NF015319.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008725 - DNA-3-methyladenine glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HSQ13945.1"
                     /translation="MRGFSNKDRCPLVDLTKPDYVEYHDKEWGVPVHDDRTIFEFLTL
                     EAAQAGLSLYTVLRKRESYRDAFAGFDPQKVARYGKTRIEALLKNPGIIRNRLKIAAA
                     VNNAGKFLQVQNEFGSFDAYIWRFVDGKPIVNRLKTLKDYPATSRESDAL"
BASE COUNT          288 a          420 c          461 g          342 t
ORIGIN      
        1 tcccacttct gggcgctgtt gtttttggta ctggcgcgat ccgatcatag cgctggcgct
       61 gtgatcgatc ttgtcactct ggcgagcctg cctccggctc tgcgagagtc gttcgagaag
      121 agtccgcaag cgaagcgcta cgctttttcg gcccacatca acccatttta tcttcatggt
      181 gatttcgatg gcgacggcga gccggacacg gcggttttga tcaaagatca cgcaaccgga
      241 aaaagcggca tcgcgatttt tcacggtaag gccaaccgtc ttgtcatcgt cggcgccggc
      301 cgcggcttgg gcaatggcag cgacgacttt tcttggctgg atgcctggca tatcttgcgc
      361 cgtggaccgg tgcggcaagg cgccgatgac aaaccgccgc caaagctgcg cggcgatggc
      421 atcatggtcg tcaagaccga atccgccagc gcactgatct actgggatgg aaagcgatat
      481 ggctggtatc agcaggcaga ctgacgtgcg gcgagacgaa ggttcgggtg ccttggttac
      541 cttgatctgc ctggcggtgt ttgccgtcgt gtttgttatt tacacgacgc gctatctgcc
      601 ggacccggtg gcgacccatt ttggcggcga taaccgggcc aacggctgga tgagccgtga
      661 aggatatctg ctgttcatgc tggcgttcat gatcggcatc tcgacgttgg tcagcttcgc
      721 cgtcggcacc ttgccgcgca agtttcccca atggaccaat gtgccgaacc gcgattactg
      781 gctggcgccg gcgcgcctgg acgactcgtt gcgctacttg tcggcccatg gcaagcgcct
      841 cggctgcctg atcatcatga tgatgctcgg catgcattac gtgatcctga aagccaatca
      901 tatccagccg ccgatgctgc cggtgccgac cttctccgcg gttctgttcg gcttcgcctt
      961 ggcgctcatc tggtggatcg tgcggctgta ccgcaggttt ccgaggaagg gttagccgca
     1021 aagaacgggc gaattttttt tccaagggga agtcgatgag agggtttagc aacaaagacc
     1081 gttgtccgtt ggtcgactta accaagcctg actacgtgga gtatcatgac aaggagtggg
     1141 gcgtgccggt gcatgacgac cggacgatct ttgaatttct caccttggaa gcggcgcagg
     1201 cgggactgag cttgtacacg gtgctgcgca agcgcgaatc ttaccgcgac gcctttgccg
     1261 gtttcgatcc gcagaaggtc gcgcgctacg gcaagacgcg gatcgaggcg ttgctgaaaa
     1321 atcccggcat cattcgcaac cggttgaaga tcgccgccgc cgtcaacaac gccggcaagt
     1381 tcttgcaggt gcaaaacgag ttcggcagct tcgatgcgta catttggcgc ttcgttgatg
     1441 gcaagccgat tgtcaatcgt ctcaaaacgc tgaaagatta tccggccact agccgggagt
     1501 cagatgcctt g
//
LOCUS       DATIRS010001028         1796 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_373744, whole genome shotgun sequence.
ACCESSION   DATIRS010001028 DATIRS010000000
VERSION     DATIRS010001028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1796)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1796)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1796
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_373744"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..359
                     /locus_tag="VLM90_13045"
     CDS             <1..359
                     /locus_tag="VLM90_13045"
                     /inference="COORDINATES: protein motif:HMM:NF013151.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13946.1"
                     /translation="LAIRVLGEVTEARLQVLRDADVIVLDEIKAAGLYEKVWQSFAVL
                     LPVKTVGVVGDERSYENVVALRVVDSQDGMTANWVALPFDLLGRISNRILNEVRGVNR
                     VVYDISSKPPATIEWE"
     gene            421..1203
                     /locus_tag="VLM90_13050"
     CDS             421..1203
                     /locus_tag="VLM90_13050"
                     /inference="COORDINATES: protein motif:HMM:TIGR00730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HSQ13947.1"
                     /translation="MSNENHEIVKIDGWGVDPGAPEVVRFLEGPQRRVTELARATRIF
                     CEFVRGFRALHFVGPCVTVFGSARFTEVNPYYRMARQAGAGLASAGFTVMTGGGPGIM
                     EAANRGAKDVGGRSIGCNIVLPEEQKHNPYLDDWVTFRYFFVRKVMLVKYSYAFIALP
                     GGFGTMDEIFETATLIQTAKIREFPLVLMGKEFWAPLLEFMSERLVKARTIDAVDLER
                     ITITDSAEEAVHVITDAAKRRFGMTYGSRMKRRWIFGERKLA"
     gene            1213..>1796
                     /locus_tag="VLM90_13055"
     CDS             1213..>1796
                     /locus_tag="VLM90_13055"
                     /inference="COORDINATES: protein motif:HMM:NF024257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HSQ13948.1"
                     /translation="MQSSRLRAIWLGAAFFVLILADTSGLAQSRSVILSTTTSTQDSG
                     LFDVLIPLFEQQSGYTVQTIAVGTGQALALAERGDADVVLAHAPSLEQESVAKGKLLN
                     RRLVMYNDFIIVGPKDDPAKVRAAKSAAAALRAIEQAKTTFVSRGDKSGTHNMELGLW
                     KLAGVAPNPPWYIESGQGMGATLGIARERNGYALT"
BASE COUNT          346 a          507 c          564 g          379 t
ORIGIN      
        1 ggttggcgat tcgggtgctc ggggaggtga ccgaggcgcg cttgcaagtc ttgcgcgacg
       61 ccgatgtcat cgttctcgac gagatcaagg ccgccgggct ctacgaaaaa gtctggcagt
      121 cttttgcggt gctgttgccg gtcaagaccg tcggcgtggt tggcgacgag cgcagctacg
      181 agaatgtcgt ggcgctgcgg gtggtcgata gccaggacgg catgaccgcc aactgggtgg
      241 cgctaccgtt cgacttgctg gggcggatct ccaatcgcat tctcaacgaa gtgcgcggcg
      301 tcaaccgcgt cgtctacgat atatcttcca agccgccggc gaccatcgag tgggaatgag
      361 tcttccggcg gcaatcgttc agttagctta aatcattacg gacttaggag tcgtgatccg
      421 atgtcgaacg agaaccacga gatcgtcaag atcgacggtt ggggagtcga tccaggcgcg
      481 cccgaagtgg tccgctttct cgaaggaccg cagcggcgcg ttaccgagct ggcccgggcg
      541 acacggatct tttgcgagtt tgtccgcggc tttcgcgccc tgcattttgt cggcccctgc
      601 gtcaccgtgt tcggttcggc gcgctttact gaagtcaatc cgtactaccg catggcgcgc
      661 caagcgggcg ccggtctggc aagcgcgggt ttcacagtga tgaccggcgg cgggccgggc
      721 atcatggaag cggccaatcg cggcgccaaa gacgtcggcg gccgctccat cggctgcaac
      781 atcgtgctac ccgaagagca aaagcataat ccttatctcg acgactgggt gacttttcgc
      841 tacttcttcg tgcgcaaagt catgttggtt aaatattcct atgcgttcat cgctctgccc
      901 ggcggtttcg gcaccatgga cgagatcttt gaaaccgcga cgttgattca aaccgcaaaa
      961 attcgcgagt tccctttggt tctcatgggc aaagagtttt gggcgcctct gctcgagttc
     1021 atgtccgaac gattagtcaa agcgcggacc atcgatgccg tcgatctcga acggatcacc
     1081 atcaccgact ccgccgaaga agcggtgcat gtgatcaccg acgcggccaa gcggcgtttt
     1141 ggtatgacgt acggttcgcg catgaagcgg cgctggatct tcggcgagcg caagctggcg
     1201 tagggaggca atatgcaatc atcgaggctg cgggcgattt ggctcggtgc agcttttttt
     1261 gtgctgatat tggcggacac ctcgggcttg gcccagtccc gcagcgtgat tctttcgacg
     1321 accacgagca ctcaggattc agggttgttc gatgtcttga tcccgctttt tgaacagcag
     1381 agcggctata ccgtccagac catcgcggtc ggcaccgggc aagcgctggc gttggccgaa
     1441 cgcggcgatg ccgatgtcgt attggcgcat gcgccgagtt tggagcaaga atctgtcgcc
     1501 aagggcaaac tgctcaaccg ccgcctggtg atgtataacg actttatcat tgtcggcccc
     1561 aaggacgacc cggcgaaagt tcgcgccgcg aaatcggcag cggcggcgct gcgtgccatc
     1621 gagcaagcga aaacaacatt tgtctcccgg ggcgacaaat ccggcacgca taacatggaa
     1681 cttggtttgt ggaagcttgc cggcgtcgcg ccgaacccgc cttggtacat cgaatcgggg
     1741 cagggcatgg gcgccacact gggcatcgcc agggaacgca atggttacgc gcttac
//
LOCUS       DATIRS010001029         3219 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_472619, whole genome shotgun sequence.
ACCESSION   DATIRS010001029 DATIRS010000000
VERSION     DATIRS010001029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3219)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3219)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3219
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_472619"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..919
                     /locus_tag="VLM90_13060"
     CDS             <1..919
                     /locus_tag="VLM90_13060"
                     /inference="COORDINATES: protein motif:HMM:NF014476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ornithine cyclodeaminase family protein"
                     /protein_id="HSQ13949.1"
                     /translation="ILSMAEMVDVIEDTLKEAASGRGFELPRRRIHHPNRMIFGILPG
                     SVHGAMGAYIQTDLDRKIHHENVMIFSAESGAPLILFQDCSINEYRTGAAGGLGAKYL
                     ARADATRVAGLGSSVHAETQLKAVAAVRKLTEAWVFSPTPERRAAFAAKMGRELEIPL
                     DVAESAEEALESADVLITATNSPTPVFDGSSLKEGMHITSIANGDKTRRRQELDDRVL
                     CRAETIFVTSKETVCVNESDIFRAVRDQVIAWDKVHEISSLLLGQVAGRSDDRQITLF
                     KLQGTGIMDVAIGLKAYERVKHSGLAQVL"
     gene            946..2358
                     /gene="sthA"
                     /locus_tag="VLM90_13065"
     CDS             946..2358
                     /gene="sthA"
                     /locus_tag="VLM90_13065"
                     /EC_number="1.6.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF003585.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003957 - NAD(P)+ transhydrogenase
                     (B-specific) activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Si-specific NAD(P)(+) transhydrogenase"
                     /protein_id="HSQ13950.1"
                     /translation="MAHYDMLVIGSGPAGQKAAIQAAKVGKKVAIVERKKVVGGICIN
                     SGTIPSKSLREAVLFLSGFRQRNLYGASYRVKKDITFEELAQRCDHVVKAEQEVIQSQ
                     LIRNSVDFIVGAASFLDPHRIQIKHDCETNEHTADYVVIGVGTEPARPADIPFDDDLI
                     IDSDGLLSLKRLPKSLTIVGAGVIGCEYACILATLGIPVVLVEKRPRLLEFVDSEIIE
                     SLQYQMRNIGITLRLNEEVIGVSKGADNVIVLQLKSGKQIRSPLLVYSAGRIGATKNL
                     GLEKLGVEADERGRLKVNENFQTTLSHIYAVGDVVGFPALASTSMQQGRHAACHAFSL
                     ACDTSTHLLPYGIYAIPEISMVGRNEEELTRDGVPYEIGVARYREIARGQIIGDTVGM
                     LKLLVHTETRELLGVHVIGEGATELIHIGQAVMALGGKLEYFVDTVFNYPTLAECYKV
                     AALAAMNKLPAHGACSVLPH"
     gene            complement(2390..2788)
                     /locus_tag="VLM90_13070"
     CDS             complement(2390..2788)
                     /locus_tag="VLM90_13070"
                     /inference="COORDINATES: protein motif:HMM:TIGR03618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PPOX class F420-dependent oxidoreductase"
                     /protein_id="HSQ13951.1"
                     /translation="MAATIPEPFKDLFTKVTFAHLGTVMADGSPQVTPVWYSYDGTHI
                     WVNSAKGRLKDKNMRRNKQVALSIQDPDNAYRYLAIQGEVEEITESGADAHIDALAKH
                     YLGKDSYPFRAPGEVRVIYKIRPQKISTMG"
     gene            complement(2821..>3219)
                     /locus_tag="VLM90_13075"
     CDS             complement(2821..>3219)
                     /locus_tag="VLM90_13075"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HSQ13952.1"
                     /translation="LDRTVLYPGVVEVLRYFRGKRRAVVSNKIHRLTVAVVQGLGVAA
                     EFDAILGGDSVAEKKPDPAMLQAVLQRFHIAPANALIVGDGDTDIEAGKRAGVITCGV
                     TYGLGNQDALRAARPEFTIDSLVALSDYFC"
BASE COUNT          699 a          972 c          913 g          635 t
ORIGIN      
        1 gattctctcg atggctgaaa tggtcgacgt catcgaggac accttgaaag aggccgcctc
       61 tgggcgcggc tttgagctgc ctaggcggcg cattcaccat cccaatcgga tgattttcgg
      121 catcctgccc ggctcggtac acggcgccat gggcgcttat atccaaacgg acttagaccg
      181 caagattcac cacgaaaatg tcatgatctt cagcgccgag agcggcgcgc cgctgattct
      241 gtttcaggac tgctcgatca acgaataccg taccggcgcg gccggcggcc tcggcgcgaa
      301 atatctggcg cgtgctgacg ccacccgggt cgcgggtttg ggtagctcgg tgcatgccga
      361 gacccaactc aaggccgtcg ccgccgtcag aaaattgacg gaagcctggg ttttcagccc
      421 gacgcccgag cgccgcgcgg cttttgccgc caagatgggc cgcgaattag aaattccgct
      481 cgacgttgcc gaaagcgctg aagaagcgct ggaaagtgcc gatgtgctga ttacagcgac
      541 gaattcaccg acgccggtct tcgacggcag cagtttgaag gaaggcatgc atattacctc
      601 catcgccaac ggcgataaga ctcgcaggcg ccaggagctc gatgaccggg tcctgtgccg
      661 ggccgagacc atattcgtga cctccaaaga gacggtctgc gtcaacgaaa gcgatatttt
      721 ccgcgccgtg cgcgatcaag taatcgcttg ggacaaagtc cacgaaatct cgagcctgtt
      781 gctcggccaa gtggcgggcc gtagcgatga tcggcaaatc actttattca aactgcaggg
      841 aaccggcatc atggacgtcg ccattgggct caaagcctac gaacgggtca agcatagcgg
      901 gctagcacaa gtactttgac gacacgacaa cgctgaggca atccaatggc acactatgac
      961 atgctggtga tcggctccgg cccggccggc cagaaggccg cgatccaggc cgctaaagtc
     1021 ggcaaaaaag tcgccatcgt ggaacgcaaa aaagtcgtcg gcggcatctg catcaactcc
     1081 ggcacgatcc cgagcaaatc actgcgcgaa gcggtgctgt ttctttccgg gttcaggcag
     1141 cgcaaccttt atggcgccag ctaccgggtc aaaaaggata tcactttcga ggagctcgcc
     1201 cagcgctgcg accatgtcgt caaagccgag caagaagtga ttcaaagtca actgatccgc
     1261 aactcggtgg attttatcgt cggcgccgca tccttcctcg atccgcaccg aatacagatc
     1321 aaacacgatt gcgaaaccaa cgaacacacg gcggactacg tggtcatcgg cgtcggcacc
     1381 gagccggcgc gccccgcgga tattcccttc gatgacgatt tgatcatcga cagcgatggc
     1441 ctgttatcgt tgaaacggct gccgaagtca ttaactatcg tcggcgccgg cgtcatcggc
     1501 tgcgagtatg cctgcatcct ggcaactctg gggattccgg ttgtgttagt cgagaaacgg
     1561 ccacgcctgc tcgaattcgt cgatagcgag attatcgaat cgttgcaata tcagatgcgc
     1621 aacatcggca tcacactgcg gctcaatgaa gaagtcattg gcgtgagcaa gggggccgac
     1681 aacgtcatcg tgctgcaact gaagagcggc aaacagattc gctcgcccct gctggtctat
     1741 tcagcgggcc gcatcggcgc caccaagaac ctcggcctgg aaaagctcgg cgtggaagct
     1801 gacgagcgcg gccgcttgaa agtcaacgag aattttcaga caaccctgag tcatatctat
     1861 gcggtcggcg acgtcgttgg ctttccggcc ttggcgtcaa cctcgatgca gcaaggccgc
     1921 cacgccgcct gccacgcctt cagcctcgcc tgcgacactt cgacccactt gctgccctac
     1981 ggcatctacg caattccaga gatctccatg gtcggccgca acgaagagga actcacccgc
     2041 gacggcgtgc cctatgagat cggcgtcgcc cgctaccgcg agatcgcccg cggccagatc
     2101 atcggcgaca ccgtcggcat gctcaagttg ctggttcaca ccgagaccag ggaactattg
     2161 ggcgtccatg tgatcggcga aggcgccacc gagctgatcc acatcggcca ggccgtcatg
     2221 gccctgggcg gcaaactcga atattttgtc gacacggttt tcaactatcc gaccttggcc
     2281 gagtgctaca aggtcgccgc gctggcggcg atgaataagc tcccggccca cggcgcatgc
     2341 agcgtgttac cgcattgaga ctggctcgct gagattcaat agctgggcct caacccatcg
     2401 tcgatatttt ctgcggacgg atcttataaa tcacccgcac ttccccggga gcgcgaaacg
     2461 ggtagctatc tttgcccagg taatgtttgg ccaaggcatc gatatgggcg tcggcgccgc
     2521 tttcagtgat ctcctcgact tcgccttgaa tcgccagata gcgataggcg ttgtcgggat
     2581 cttggatcga cagagcgact tgcttgttgc gccgcatgtt cttgtccttg agccggccct
     2641 tcgccgagtt gacccagata tgcgtaccgt cgtagctgta ccacaccggg gttacctgcg
     2701 ggctgccgtc cgccatcacg gtaccgaggt gcgcgaaagt gacttttgta aacaaatctt
     2761 taaaaggttc ggggatcgtc gcggccatga cttacctcca gtttcggttt ataaagaaat
     2821 tcagcaaaaa taatcggaca aagcaacgag actgtcgatg gtgaattctg ggcgcgcagc
     2881 gcgcagcgcg tcttggttgc ccaagccata ggtcacgccg caggtgatca caccggcgcg
     2941 cttgccggct tcgatatcgg tatcgccgtc gccgacaatc aacgcgttgg cgggcgcgat
     3001 gtgaaaccgc tgcaacaccg cctgcaacat cgctggatca ggttttttct cggcgacgct
     3061 atcgccgccc aatatcgcat cgaactccgc cgccacgcct aacccttgca ccacggccac
     3121 cgtgagccgg tggatcttgt tgctcaccac ggcgcgccgc ttgccgcgaa agtagcgtaa
     3181 aacttccacc actcctggat aaagcacggt gcgatcgag
//
LOCUS       DATIRS010001030         2762 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_865800, whole genome shotgun sequence.
ACCESSION   DATIRS010001030 DATIRS010000000
VERSION     DATIRS010001030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2762)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2762)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2762
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_865800"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..515)
                     /locus_tag="VLM90_13080"
     CDS             complement(<1..515)
                     /locus_tag="VLM90_13080"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSQ13953.1"
                     /translation="MAKMFIGGESVGSVTNNTSEVRNPATGATVDTVPQGNDKDVQQA
                     ISAAEDAFKVWSDVSPEDRGNALMNAGELIKKNTAEIAQLLTQEQGKTLFEAGLEIHH
                     LVHGLEFYAGLASKVRGSHVPLPQKNAYGMVVRQPIGVCGGIVPWNFPLTLMGTKLGP
                     ALAAGNTIIIKP"
     gene            complement(651..1433)
                     /locus_tag="VLM90_13085"
     CDS             complement(651..1433)
                     /locus_tag="VLM90_13085"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HSQ13954.1"
                     /translation="MAMIDSRIENGIAVLEINRPPVNSYTTELLKELDAAILDSRFND
                     DVHAIVITGKVEKFFSAGADINMLSSKSLGFKNNFALHGHEVLMRLENTPKIIIAAIN
                     GHAVGGGLEIAMACDIRIAKKEGGKVGLAEINLGVMPGMGGTQRLPRLVGKARAMELC
                     FTGKTIAFEEALEMGLVHYIYEKEGFLDQVMDYAKPFVVPNKSSLAVGKVKRAITTGL
                     ELSLPDGLAFERELLAQTFGSEDGQEGVKAYLEKRTAKFTGK"
     gene            1577..>2762
                     /locus_tag="VLM90_13090"
     CDS             1577..>2762
                     /locus_tag="VLM90_13090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13955.1"
                     /translation="MAKKDLHDERLEKGLEALRSAGIAARIAIDAPTSASVAQLKSAI
                     GQSAEADIAAIFMLGKIAAHESLHLIREIEITATDKDVKKEIKRALFKLSQKGIVEAQ
                     EPPAEKKPAPLFEREYEIEAYMSAVDGGGGRLVWIAKPQPNRGLQVIQAMLHDRDGLL
                     RFGGVQMKRKELRAMADEIKQQHGVSMIAVPWEFADRIVYEGYERAKARGRSGQSDLN
                     DFHAIRSVIGTGKPKAVTHPVYQKLGTEDFRDGSWREQSRRLLEEPELRYWVIVDEWV
                     QDCLAALHEAQSSPLVLNPVQKEERLASVVRDAVKTLCAGDNGQAFKRRMEDMALYFA
                     ETGRLEQAKVSLAVAQQVGEGDPGPLDVSFLTGLMQKSFVSLMSQMKAQHEAQQKAEQ
                     SSL"
BASE COUNT          600 a          734 c          842 g          586 t
ORIGIN      
        1 ggcttgatga tgatcgtgtt gccggcagcc aacgctggac ccaacttggt acccattaaa
       61 gtcagcggga aattccacgg cacgatgccg ccgcacacgc cgatgggttg gcgcacgacc
      121 atgccgtagg cgtttttttg cgggagcggc acatgggagc cgcgcacttt ggaggcgagg
      181 ccggcgtaga attccagccc atgcacgaga tgatgaatct ccaagcccgc ttcgaacagc
      241 gtcttaccct gttcttgggt gagcagttgg gcgatctctg cggtattctt tttgatcaac
      301 tcgccggcgt tcatcagcgc gttgccgcga tcttcgggcg aaacgtcgga ccagacctta
      361 aaagcatctt ccgccgcgga gatcgcttgt tgcacatcct tatcgttccc ttgcggcacg
      421 gtgtcgaccg tcgcgccggt ggcgggattg cgcacctcgc tagtattatt agttacagaa
      481 ccgacggact cgccgccgat gaacatcttg gccattactt aacctccatg aaaaaaagta
      541 aaaagttaaa aagaaaaagt aaaaagtaaa gaggcaagaa acaacccgtc tcaggcgaaa
      601 ttttttgcct ttgacctttt tacttttgcc ctttgagttg ccttggctac ttatttgcca
      661 gtgaatttcg ccgtgcgttt ttccagatag gctttgacgc cttcctggcc gtcttcgctg
      721 ccgaaggtct gcgccaggag ttcgcgctcg aaggccaagc cgtcgggcag ggacagttca
      781 aggccggtgg tgatggcgcg tttgactttg cccaccgcca gactgctctt gttgggcacg
      841 acgaacggtt tggcatagtc catgacttga tcgagaaaac cctctttctc gtagatgtag
      901 tggaccaggc ccatttcgag ggcttcttcg aaggcgatgg ttttgccggt gaagcagagc
      961 tccatggcgc gggctttgcc gaccaagcgc ggtagacgct gggtgccgcc catgccgggc
     1021 atgacgccca aattgatttc cgccaggcca actttgccgc cttctttttt ggcgatgcgg
     1081 atgtcgcagg ccatggcgat ttccaagccg ccgcccaccg cgtggccgtt gatcgccgca
     1141 atgatgatct tcggggtgtt ttccaggcgc atgagcactt cgtggccgtg cagcgcgaaa
     1201 ttgtttttga aaccgagcga cttgctcgag agcatgttga tgtcggcgcc ggcggagaaa
     1261 aacttttcga ccttgccggt gatgacgatg gcgtggacat cgtcgttgaa gcgggagtcg
     1321 agaatcgccg cgtccaattc tttgagtagt tccgtagtgt agctgttgac cggcgggcgg
     1381 ttgatttcca acaccgcgat gccgttttca atgcgcgaat cgatcatggc cataactgcc
     1441 tcctcatgca aaatcaactc aatgaattag ctggcatgac ctcgtaagtc aaggcgcttg
     1501 ggcgttcact aagcggttgg aaagtgcgca caactgtgac atcagtaagc gaaatcggcc
     1561 gaggaaggaa tgacatttgg cgaaaaaaga tttacatgac gagcggctgg aaaaagggct
     1621 tgaggcgctg cgatcggcgg ggattgccgc aaggatagcc atagacgcgc ccacgtcggc
     1681 gagcgttgcg cagctcaaga gcgccatcgg tcaatcggcg gaagcggata ttgcagcgat
     1741 attcatgctc ggcaagattg ccgcgcatga atcgctacat ttgattcgcg agatcgaaat
     1801 cactgcaacc gacaaggatg taaagaaaga aatcaaacgc gcgctcttca agctcagtca
     1861 aaagggtatt gtcgaagccc aggagccgcc ggccgagaaa aagcccgcgc cgctgttcga
     1921 gcgagaatac gagatcgagg cctatatgtc cgccgtcgat ggcggcggcg gcaggttggt
     1981 ttggatcgcc aagccgcagc ccaatcgcgg tttgcaggtg atccaggcga tgttgcatga
     2041 ccgcgacggg ctcttgcgtt ttggcggtgt gcagatgaag cgcaaagagt tgcgcgccat
     2101 ggccgacgag atcaagcagc agcatggcgt cagcatgatc gcggtgccgt gggagttcgc
     2161 cgaccggatc gtttacgaag gttatgaaag ggccaaggcg cgcggccgga gcggccaaag
     2221 cgacctcaat gactttcacg cgattcgctc ggtcatcggc acggggaagc cgaaagccgt
     2281 gacgcatccg gtttaccaaa aacttggcac tgaggatttt cgtgacggtt cgtggcgcga
     2341 acagtcgcgc cgtttgctcg aagagccgga gctgcgctac tgggtgatcg tcgacgaatg
     2401 ggtgcaggac tgcctggcgg cgttgcatga agcgcagtcg agcccgctgg tgttgaaccc
     2461 agtgcaaaag gaagaacggc tcgccagcgt cgtgcgcgac gcggtcaaga cgctttgcgc
     2521 cggcgacaac ggccaagcgt tcaagcggcg catggaagac atggcgctct atttcgccga
     2581 gacaggtcgc ctggagcagg ctaaagtttc actcgcggtg gcacagcaag tcggcgaagg
     2641 cgatcccggg ccgttggacg tttcgtttct caccgggctg atgcaaaaga gcttcgtctc
     2701 tctcatgtcg cagatgaaag cgcagcacga agcccaacag aaagcggagc aatcgtcgct
     2761 ga
//
LOCUS       DATIRS010001031         2372 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_865838, whole genome shotgun sequence.
ACCESSION   DATIRS010001031 DATIRS010000000
VERSION     DATIRS010001031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2372)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2372)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2372
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_865838"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(241..942)
                     /locus_tag="VLM90_13095"
     CDS             complement(241..942)
                     /locus_tag="VLM90_13095"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ13956.1"
                     /translation="MLNVDAIHVYYDAIHALKGVSFSVAQGELVTLLGGNGAGKTTTL
                     KTLSGLLRPRSGAIKLEDETLSAVEPHEIVGRGVAHVPEGRKVFPRFTVLENLQIGGY
                     TRAKNALGAELDFVYQMFPRLKERQKQDAGTLSGGEQQMLAIGRALMTKPKLLLLDEP
                     SMGLAPKIVEQILENIREINRAGVTVLLVEQNAAMALAISHRGYVLETGSVILEGKAS
                     ELAGNDLVRQAYLGG"
     gene            complement(929..1714)
                     /locus_tag="VLM90_13100"
     CDS             complement(929..1714)
                     /locus_tag="VLM90_13100"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ13957.1"
                     /translation="MALLELRDISKRFGGLQALSLVSMKIEEGMIASLIGPNGAGKTT
                     LFNTLTGIYRPDQGEIRFQERSLIGLKPESITGAGISRTFQNIRLFAHMSVLDNVLVG
                     MHTRLHSNLADIFLASKRFHAGEKAARQRAHELIELTGLGGRENEWAQQLSYGEQRRL
                     EIARALAAAPQLLLLDEPTAGMNASEAQSLMALFKELMGRYVKAILLIEHNMRVVMGV
                     SDCVHVLDYGEKIAEGNPDEVRQDPRVIEAYLGTGDWLKNAQR"
     gene            complement(1899..>2372)
                     /locus_tag="VLM90_13105"
     CDS             complement(1899..>2372)
                     /locus_tag="VLM90_13105"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13958.1"
                     /translation="KAIREDEIAASAMGVPVVRMKLFGFAVGASFASAVGVLFAAKQV
                     FINPESFTFMESIGVLAMVILGGMGSVPGAILGATGVTILNLQLLKGLSLWLNGLRQS
                     GAVWSIPLVGDLALANLPAQFEPAKYERMIFGLILIVMMIFRPQGILPPKQENKK"
BASE COUNT          474 a          736 c          663 g          499 t
ORIGIN      
        1 ggccaatgac ggtctgcacg acaaacatcc cgacgttggc gatcagcaga aacttcaccg
       61 ccggcgtcac actgccgccg ccgaaactca tctgtcgggt ttgatattgc attgccttag
      121 agcttaaccg ttattcgccc ctgttaaaag ataagagggc gggtttaaac ccgcccgaca
      181 aatccaaatt ctttttttgc gccctttgcg ttctatgcgg ccaacgctcc gtaattgcct
      241 tcacccgccc aagtacgcct ggcgcactag atcattgccc gccaactcgc tcgccttgcc
      301 ttcgagaatc accgagccgg tctcgagcac ataaccgcgg tgcgagatcg ccagcgccat
      361 ggcggcgttt tgctcgacga gcaaaacggt cacgccggcc ctattgattt ctcggatgtt
      421 ttcgagaatt tgctcgacga tcttcggcgc cagtcccatg gacggttcgt cgagtagcag
      481 cagcttcggc ttggtcatca gggcgcggcc gatggcgagc atctgctgct cgccgccgga
      541 cagcgtgccg gcgtcttgtt tttgccgctc tttcaaacgc ggaaacatct gatagacgaa
      601 gtctaactcg gcgccgagcg cgtttttcgc ccgcgtgtag ccgccgatct ggaggttttc
      661 cagcaccgtg aagcggggaa aaacttttcg tccctcgggc acatgggcga cgccgcggcc
      721 gacgatctca tggggctcca ctgcgctgag cgtttcatct tccagcttaa tcgcgccgct
      781 gcgcggccgg agcagaccgg agagagtctt caaggtcgtc gtcttgcccg cgccgttgcc
      841 gccgagcagc gtgaccaact cgccctgcgc gacgctgaag gagacgcctt tgagcgcgtg
      901 aatcgcgtcg tagtagacgt ggatggcgtc aacgttgagc atttttcaac caatcgccgg
      961 ttcccagata agcttcgatg acgcgcggat cctggcgtac ttcgtcggga ttgccctcgg
     1021 cgatcttctc gccgtagtcg agcacatgga cgcaatccga cacgcccatg accacgcgca
     1081 tgttatgttc gatcaagagg atcgccttga cgtagcggcc catgagctct ttgaacagcg
     1141 ccatcaacga ctgcgcctcg ctggcgttca tcccggcggt cggctcgtcg agcaaaagca
     1201 actgcggtgc cgccgccagt gcccgggcga tttccaggcg gcgctgttcg ccgtaagaaa
     1261 gctgctgcgc ccattcgttt tcacggccgc cgaggccggt aagctcgatc agctcgtggg
     1321 cgcgctgacg cgccgccttt tcgccggcat gaaatctttt cgacgccaga aaaatatccg
     1381 ccaagttcga gtgcagacgg gtgtgcatgc cgaccaagac attgtcgagc acactcatat
     1441 gcgcgaacag ccggatattt tgaaacgtcc ggctgatccc cgcgccggta atcgactcag
     1501 gcttcaaacc gattaacgac cgttcttgga aacgaatttc gccctggtcc ggccggtaga
     1561 tcccggtcag ggtattgaac agcgtcgtct tgccggcgcc gttgggaccg atgagcgatg
     1621 cgatcatccc ctcttcgatc ttcatgctaa ccagcgacag cgcttgcagg ccgccaaagc
     1681 gtttggagat atcgcgcagt tcgagcagag ccatcttcag ttcctgcgta ctgcttcttc
     1741 tcgcatcgaa cccggagaag atatttcccg caaaggcgca aagtcgcaaa ggtcggaatc
     1801 cttgtcattt cgatccaatg gagaaatcct tctcagatca gtcgcatccg ctcgggatga
     1861 cgggctctgg cccgtcactt tgcgtctttg cgtctttgtc atttcttatt ctcctgcttg
     1921 ggcggcagaa tcccctgggg acggaagatc atcatgacga tcaagatcag gccgaagatc
     1981 atgcgctcat atttggccgg ctcgaactgc gccggcaggt tcgccagcgc caaatcgccg
     2041 actagcggga tcgaccacac tgcgccggat tgacgcagcc cattgagcca gagcgatagg
     2101 cctttgagca attgcaaatt cagtatcgtc accccggtgg cgccgaggat cgcaccgggc
     2161 accgagccca tgccgccaag gatgaccatg gcgagcacgc caatggattc catgaaggta
     2221 aagctctcag gattgataaa cacctgcttg gcggcgaaca gcacgccgac cgcggaagcg
     2281 aacgaggcgc cgacggcgaa gccaaacaac ttcatgcgca ccaccggcac ccccatggcg
     2341 gaagccgcga tttcgtcttc gcggatcgct tt
//
LOCUS       DATIRS010001032         1833 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1554347, whole genome shotgun sequence.
ACCESSION   DATIRS010001032 DATIRS010000000
VERSION     DATIRS010001032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1833)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1833)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1833
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1554347"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1192
                     /locus_tag="VLM90_13110"
     CDS             <1..1192
                     /locus_tag="VLM90_13110"
                     /inference="COORDINATES: protein motif:HMM:NF014774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="heterodisulfide reductase-related iron-sulfur
                     binding cluster"
                     /protein_id="HSQ13959.1"
                     /translation="KKLDGTMCPSYMGTLDEEHSTRGRANALRNVIAGLVPKTEFTGK
                     RLYDVMDLCLECKACKAECPSNVDMAKLKYEFLDHYHRANGLPLRNRIFGAIASLNRI
                     GSALAPVSNWLANSTPNRWLMDIFGGIDRRRPLPQFASESFEDWFRVHKPEGDGSQGE
                     VVLFHDTFNNYNTPNVAIAATRFLEKSSYRVLLVDKKCCGRPMISKGMLGQAKENAAW
                     NVAKLAPYAEKDTPIVGLEPSCLLTLRDEYPEFVRAEAAKKVAQHSFLLEEFVMREVN
                     AGRLSLGAYGKGKKVLLHGHCHQKALVGTAPTVAMLKAAGYEVSEVDSGCCGMAGSFG
                     FEKEHYDLSIKIGNRRLAPAVKAASAEVEVAAPGISCRQQIDHLAQRQAKHPAELLWD
                     SIKN"
     gene            1209..>1833
                     /locus_tag="VLM90_13115"
     CDS             1209..>1833
                     /locus_tag="VLM90_13115"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13960.1"
                     /translation="MDTLRVIGYYPLPPFVVAQEKDFFAQEGLKIDFTIATLAPEHNK
                     GMGEGRWDISLTSPDTMVARVTRDGHDFLLYLMAERGLEVKLIGAKGITAPTQLRGET
                     LAGDPGDSNYDLHRRKIMRAHGVGESDYAVKIIGTSPFRFEALRRGEVAACMLAAPYD
                     GQALSEGFNLLASGAEYIPNYATTACWARSAWVNAHRDKVLRFVRAFV"
BASE COUNT          403 a          520 c          541 g          369 t
ORIGIN      
        1 caaaaagctc gacggaacta tgtgtccgtc gtacatggga acactggacg aagaacactc
       61 gacccgcggc cgggccaatg cgctgagaaa cgtaattgca ggcttagtgc cgaaaaccga
      121 attcaccggc aagcgtttgt atgacgtgat ggatctctgc ctggaatgca aagcgtgcaa
      181 ggccgaatgt ccgtccaacg tcgacatggc gaaattgaaa tacgagttcc tcgaccacta
      241 tcaccgcgcc aacggtttgc cgctgcgcaa tcggatcttc ggcgccatcg ccagtctcaa
      301 tcgcatcggc tcggcactgg ctccggtctc caattggctt gcgaactcga cgccgaaccg
      361 ctggttgatg gatatcttcg gcggtatcga ccggcgccgc ccgttgccgc agttcgccag
      421 cgagagcttc gaagattggt ttcgagttca caagccggaa ggcgacggct cgcagggcga
      481 agtggttttg ttccacgaca ccttcaacaa ttacaacacg cctaatgtcg ccatcgccgc
      541 aacgcgcttt ttggaaaaat ccagctatcg agttcttctc gtcgacaaga agtgttgcgg
      601 ccggccgatg atctccaaag gcatgctcgg ccaagccaag gaaaacgccg cttggaacgt
      661 cgccaagctc gcgccatacg cggagaagga cacgccgatc gtcggcctgg agccgtcctg
      721 tctattgaca ttgcgcgatg aatatcccga gtttgtccgc gccgaagcgg ctaagaaagt
      781 cgcgcagcat agtttcttgc tcgaagagtt cgtcatgcgc gaagtcaatg ccggcagact
      841 ctcactgggc gcctatggca aaggaaaaaa agttctgctg cacggccact gccatcaaaa
      901 agccttagtt ggcacggcgc cgaccgtcgc catgctcaag gccgccggct acgaagtcag
      961 cgaagtcgac tctggctgct gcggcatggc tggttccttc ggctttgaaa aggaacacta
     1021 cgatctgtca atcaagatcg gcaaccggcg cttggcaccg gcggtcaagg cggcatcagc
     1081 agaagtcgaa gtcgccgcac cgggaatttc ctgccggcag cagatcgatc acttggcgca
     1141 acggcaggcg aagcatccgg ccgaactgct ttgggacagt atcaagaatt agcatcgagg
     1201 cgggctttat ggatacactt cgagtcatcg gttactaccc gctgccgcca tttgtcgtcg
     1261 cgcaagaaaa ggacttcttc gcgcaggagg ggcttaagat cgatttcaca atcgcgacct
     1321 tggcaccgga gcacaacaag ggcatgggcg agggacgatg ggacatcagt ttgaccagcc
     1381 ccgacaccat ggtcgcccgg gtgacccggg atggtcatga ctttcttttg tatctgatgg
     1441 ctgagcgcgg gcttgaagtg aaactgatcg gtgccaaggg gatcacggcg ccgacgcaac
     1501 tgcgcggcga aaccttggcc ggcgaccctg gagattccaa ctacgatttg catcggcgca
     1561 agatcatgcg cgcccatggc gtgggtgagt ctgattacgc agtgaagatc atcggtactt
     1621 cgccgtttcg tttcgaagcg ctacgcagag gcgaagtggc ggcctgcatg ttggcggcgc
     1681 cctacgatgg ccaagctttg agcgagggat tcaacctgtt ggcgagcggc gccgagtaca
     1741 ttcccaacta cgcgacgacc gcttgttggg ccaggtccgc ttgggtaaat gctcatcgtg
     1801 acaaggtgtt gcgctttgtc cgcgctttcg tcg
//
LOCUS       DATIRS010001033         2558 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_78286, whole genome shotgun sequence.
ACCESSION   DATIRS010001033 DATIRS010000000
VERSION     DATIRS010001033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2558
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78286"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..295)
                     /locus_tag="VLM90_13120"
     CDS             complement(<1..295)
                     /locus_tag="VLM90_13120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13961.1"
                     /translation="MIQELTAGIPYTVDTGEKLVNETFGPNNIRRRKTGTHDLMPMSV
                     RNGRLLAGEISLEQNGFVLVEHKTKVGDFFDTAQLESVYYPEVEQLIKQQSGAS"
     gene            complement(337..1338)
                     /locus_tag="VLM90_13125"
     CDS             complement(337..1338)
                     /locus_tag="VLM90_13125"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13962.1"
                     /translation="MYCRACRILTVLFVLSHLATELAWGQEKKTLRVVFVSLAWNAQL
                     PFRVANYRGYFRDQGLTVEQIFVSGGPTAVMALVSGNIDFATIGGAQAAIRSKARGLD
                     MNIIASTSNYTNYTLIGNKDIKRIEDLRGKIVGITGAGSFSDFTVRLYLKRNNLEPDK
                     DVTLRSIGQTVVRASALEKGLIAAAPFSAEDTVKLLDKGFAMIANFNEALRVPQSVYV
                     SRGEMLEKSPDTTKRFLKALILGMQFAKFNKQEAIKIGFAAGLQGDPEIVQRSYDLFS
                     PGYAADMSVAWDGIQTMLDDDHRTGLVDKKFTLDRVVNDRILKQAQQELKNEGRLKQ"
     gene            complement(1354..2322)
                     /locus_tag="VLM90_13130"
     CDS             complement(1354..2322)
                     /locus_tag="VLM90_13130"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13963.1"
                     /translation="MKLAIVLAFALLAPTIINAERVRTVIPRATLNYLSVPVAEVKGY
                     FRDENLENETIVIPGSSAIAALVSGEVDYSGAGGTGMRAALRGAPIKAVLFQTEKVTW
                     YLIAAPEIAKGADLKGKRVAVGTVGDTQDALITAYAERNGVGPRDLIRVAMPSRSTTT
                     TILGLKSGAIQAATVNGDEALIAEKEGLRTLTFLGDLFPYPFQGFMASDEKIAKRPGD
                     IKRWLRAMMRALMFIRERPEEAADIAIKKIPMGSPSRPIVIEGIRRFVRALPDGIPGV
                     PTAQGLKNVIEFDVKAPLKIKEDVAPEKFLALKLAAEVREELERKR"
     gene            complement(2333..>2558)
                     /locus_tag="VLM90_13135"
     CDS             complement(2333..>2558)
                     /locus_tag="VLM90_13135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13964.1"
                     /translation="IKIVEREWKLDAVTARDSYQSIMKAASRDGASSDAGLKVHIKLI
                     QNSDKSIGDIALNKIVDFRVLEEVRRELAR"
BASE COUNT          473 a          725 c          772 g          588 t
ORIGIN      
        1 gcgacgcgcc cgattgctgt ttgatcaact gctcgacttc cgggtagtag accgactcca
       61 attgcgccgt gtcgaagaag tcgccgactt tggttttgtg ctcgaccagg acgaagccgt
      121 tttgctcgag tgaaatctcg ccggcaagca aacggccatt gcgcaccgac atcggcatca
      181 agtcgtgggt gccggttttg cgccgccgga tgttattcgg accgaaggtt tcgttgacga
      241 gcttttcacc cgtgtccacg gtatagggga tgccggcggt cagttcttgg atcatgactg
      301 aagctccttg ccgatttaac tcaccatagc acaaacttat tgttttagcc gtccttcgtt
      361 tttcaattcc tgctgcgcct gtttgagaat ccgatcgttg acgacccggt cgagggtgaa
      421 ttttttgtcg accaagccgg tgcggtggtc gtcgtcgagc atggtttgaa tgccgtccca
      481 ggccaccgac atatcggcgg cgtaaccggg gctaaacaga tcgtaagaac gctggacgat
      541 ttccgggtcg ccctgcaagc cggcagcgaa gccgatcttg atcgcttcct gtttgttgaa
      601 cttggcgaat tgcatgccga gaatcagcgc ctttaagaac cgcttggttg tatccgggct
      661 tttctccagc atctcgccgc ggctgacgta gacgctctgg ggcacgcgca gggcctcatt
      721 gaaattggcg atcatggcga agcccttgtc gagcagtttg acggtgtctt cggcggaaaa
      781 gggcgcggcg gcgatcagcc ctttttccaa cgcgctggcg cgcaccacgg tttgaccgat
      841 tgagcgcaag gtgacgtctt tgtcgggttc gagattgttg cgtttgagat agagcctaac
      901 ggtgaaatcg gaaaaggacc cagcgccagt gatgccgaca atcttgccgc gcaggtcttc
      961 gatccgtttg atgtctttgt tgccgatgag cgtgtagttg gtgtagttcg acgtcgaagc
     1021 gatgatgttc atgtcaaggc cgcgtgcttt actgcggatc gccgcctggg cgccaccgat
     1081 ggtggcgaag tcgatgtttc ccgacaccag tgccatgact gccgttgggc cgccactgac
     1141 gaagatttgc tctacggtta gcccctgatc gcggaaatag ccgcggtaat tggcgacccg
     1201 gaatggcagt tgcgcattcc aagccaagct gacgaagacg acgcgcagtg ttttcttttc
     1261 ctggccccaa gcgagctccg tggccaggtg agataggaca aaaagaacgg ttagaattcg
     1321 acaagcccgg cagtacatgt tggctaacct tcgctacctt ttccgttcca actcttctct
     1381 gacttcggcg gcgagcttca gcgctaggaa cttttccggc gcgacatcct ccttgatttt
     1441 gagcggcgct ttgacgtcga actcgatgac atttttcagc ccctgggccg tcggcacgcc
     1501 agggatgccg tcgggcagcg ctcggacaaa acggcggatg ccttcgataa cgatgggccg
     1561 gctcggactg cccatgggaa ttttcttgat ggcgatatcg gctgcctctt cggggcgctc
     1621 gcggatgaac atgagggcgc gcatcatggc gcgcagccag cgtttgatat cgccgggccg
     1681 cttggcgatc ttctcatcgc tggccatgaa gccttgaaac gggtagggaa acaggtcgcc
     1741 taaaaatgtc agcgtgcgca agccttcttt ttcagcgatc aacgcttcgt cgccgttgac
     1801 tgtggcggcc tggatcgcgc ccgacttcag tcccaaaatg gtcgtggtgg tcgagcgcga
     1861 cggcatggcg acgcggatca gatcgcgcgg cccaacgccg ttgcgttcgg cgtaggctgt
     1921 aatcaaagcg tcctgggtgt cgccgacggt gccgaccgcg acgcgcttac ctttgagatc
     1981 ggcacccttg gcgatctccg gcgcggcgat caagtaccag gtcactttct cggtctggaa
     2041 caacaccgct ttgatcggcg cgccgcgcag cgccgcgcgc atgccggtgc cgccggcgcc
     2101 gctatagtcg acctcgccgc tgaccaaggc ggcgatggcg ctgctgccgg gaatgacgat
     2161 ggtttcgttt tccaaattct catcgcgaaa gtagcctttg acctcggcca ccggcacgct
     2221 cagatagttc aacgtggcgc gcggaatgac cgtacgcaca cgctcggcat taataatagt
     2281 cggtgcgaga agcgcaaagg ccaagacgat ggctagtttc atggtattgc cctcagcgcg
     2341 ccaattcgcg ccggacctct tcaaggaccc ggaagtcgac gatcttgttc aacgcgatgt
     2401 cgccgatgct tttgtcggag ttctggatca gtttgatatg gaccttcagg ccggcgtcgg
     2461 acgaggcgcc gtcgcggctg gcggccttca tgatcgattg gtaggagtcg cgcgccgtca
     2521 ccgcatcgag cttccattcg cgctcgacga tcttgatc
//
LOCUS       DATIRS010001034         2899 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_275517, whole genome shotgun sequence.
ACCESSION   DATIRS010001034 DATIRS010000000
VERSION     DATIRS010001034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2899
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_275517"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            228..1463
                     /locus_tag="VLM90_13140"
     CDS             228..1463
                     /locus_tag="VLM90_13140"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ13965.1"
                     /translation="MFDALRSNTTMRALGALYGGSLLSGAWTMVIPTIPVIASHFNVS
                     PGAAAQIVTAMALGRFTGTPISGVLLDRMGVRAVVVGGAALVSAAAFVAALLPWLPAL
                     LFFCFVMGVGDSIWALGREVAGVDLARQNQRGRVLSTLHGTHNAGTALCPWLGGVLTE
                     QYDFHAAFFAYGIFAALSVVLGFGAPVAQAVHYAAPKTIGRTGWSLAAIGERVRGLGS
                     LFWEIRPGLRSTYIALVVATWASHSYRITLQSMLPLYAGAHLNFSPSQVGLLFSIAGA
                     FVFVMIIPSGIIMDKVGRKWATVPSTGLPALAFLLIPFTDSFTQLAAMLALTGICNGL
                     SLGSMSVSTFDVVPAHARGRLQAARRMIAEMGGTLAPLVGGYLATRFNPGVPFLVYVP
                     ILLFAAVYLALAGRETLER"
     gene            1589..2827
                     /locus_tag="VLM90_13145"
     CDS             1589..2827
                     /locus_tag="VLM90_13145"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ13966.1"
                     /translation="MANARQKTSSLRSLIALYVSTFFSGAWAMIIPTIPVLAGEFGVS
                     AGGAAQVITGFAFGKMAGTVLGGMLLDRKGTRFGLVGSALVAALASFCAAWVAWFWLL
                     VFFAFVLGATDTLGSVAREIAAIDQAQRSQRGRIISSLHGTHTIGAAVCPFIGGWLTE
                     LFNYQAAFFGYAVVSVASVFLGLLVTDSPGEAHGRSPAVGGLTGWSVGAIKQRIGALA
                     LLYREIRVDLRSTYCSIVFATLVNQSQRIIVQSMLPLYAVSYLHLSPSQIGMLFSISG
                     VVIFAVMIPAGFLMDRVGRKWCTVPSTAIPALIFFLIPMTTSFMQLAMLIGIAGVAQG
                     LSLGSLATSTYDVVPAHVRGRLQALRRTIAELGSGAAPLFAGYLANTFNPGVPFLVYA
                     PLLLLSALLLAFVSKETLDK"
BASE COUNT          443 a          820 c          927 g          709 t
ORIGIN      
        1 gtgaattgga ttccaagtac tcgtctgcca cacgctagtg ccctggctca aaagattgca
       61 aaacaagtct gagtttttca catcgtcatg ccggcgtgag aggggcgggt ccacggtggc
      121 ggagaagcta gagaagtcga attcgagtcg ccggtatcag aatccttccg cgcatagccg
      181 aggatgtttg atttaagcca tgatgagaaa gccctcgctt caagagcatg tttgacgctc
      241 tgcgatcgaa cacgacgatg cgcgctttgg gcgcgttgta cggcggtagt ttgctctccg
      301 gggcctggac catggtgatt ccgaccattc cggtgatagc cagccatttt aatgtctctc
      361 ccggcgcggc ggcgcagatt gtcacggcga tggcgctggg ccgcttcacc ggcacgccga
      421 tcagcggtgt gctgttggat aggatgggtg tgcgcgcggt ggtggttggc ggagcggcgc
      481 tggtgagcgc cgcggcgttc gtcgccgcgc tgttaccttg gctgccggcg cttttattct
      541 tctgcttcgt catgggcgtg ggtgacagca tctgggcgtt gggccgcgaa gttgccggcg
      601 ttgatttggc gcgccagaac cagcgcggcc gggtcttgtc gacgttgcac ggcacgcata
      661 atgccggtac ggcgctctgc ccgtggctcg gcggggtgct caccgagcag tatgattttc
      721 acgcggcgtt tttcgcctac gggatttttg ccgcgctgtc ggtggtgctg ggtttcgggg
      781 cgccggttgc ccaagcggtg cattacgccg cgccgaaaac tattggccgc accggttggt
      841 ccctcgctgc cataggtgaa cgcgtgcgcg gcttgggctc gctgttctgg gaaattcgtc
      901 ctggactgcg ctcgacttat atcgcgttag tggtggcgac ctgggcgagc cattcctatc
      961 ggatcacgct gcagagcatg ctgccgctct acgccggcgc ccatctcaat ttctcgccgt
     1021 cgcaggtggg tttactattt tcgatagccg gcgccttcgt ctttgtcatg atcattccgt
     1081 cgggcattat catggacaaa gtcggccgca agtgggccac cgtgccgagc acgggtttgc
     1141 cggcgctggc atttttgctg atcccgttta ccgatagttt cacgcagttg gcggcgatgc
     1201 tggcgctcac cgggatttgc aacggtctat cgctaggctc catgtcggtg tcgacgttcg
     1261 atgtcgtgcc agcccacgcc cgcggccgtt tgcaagcggc ccggcgcatg atcgccgaaa
     1321 tgggtgggac tctagcgccg ctggttggcg gttatttggc gacgcgcttc aatcccggcg
     1381 tgccgttttt ggtttacgtg ccaattctat tgttcgccgc ggtctatttg gcgctggccg
     1441 ggcgggaaac gttggaacga tagaagaggt taggcgtgaa gggtgagggg tgaggcgtcc
     1501 tatcctccca acgccttacc cttcacccct taccccttac aaaaagtgcg tcctcgggca
     1561 actgtttgcg cgctaaagaa attccatcat ggctaatgcc aggcaaaaaa cttccagctt
     1621 gcgcagcctg atcgcgctct atgtcagcac cttcttctca ggggcgtggg cgatgatcat
     1681 tccgacgatc ccggtgctgg cgggggaatt cggcgtgtcg gcgggcgggg cggcgcaggt
     1741 gatcaccggt ttcgccttcg gcaagatggc cggcacggtg ctgggcggga tgttgcttga
     1801 ccgcaaaggc acgcgcttcg gtttggtagg ctcggcgctg gtcgccgcgc tggcctcgtt
     1861 ttgcgccgct tgggtggcgt ggttttggtt gctggtattt ttcgcctttg tcttgggagc
     1921 gaccgatacc ctgggctcgg tggcgcggga aatcgccgcc atcgaccagg cgcaacgcag
     1981 ccagcgtggc cgaattatca gcagtcttca tggcacccat accatcggcg cggcggtctg
     2041 cccgtttatc ggcggctggt tgactgaact gttcaattac caggcggcat tttttggcta
     2101 cgcggttgtc agtgtcgctt cggtgttctt gggtctcttg gtcaccgact cgccgggcga
     2161 agcccatggc cgctcgccgg cggttggtgg gttgaccggt tggagtgtcg gcgccatcaa
     2221 acagcgcatc ggcgcgctgg cgctgctcta tcgggaaatc cgcgtcgatc tacgttcgac
     2281 ctattgttcc atcgtgttcg cgacgttggt caatcaatcg caacgcatca tcgtccaaag
     2341 catgctgccg ttatacgcgg taagctattt gcatctgtcg ccgagccaga tcggcatgct
     2401 gttttcgata tccggcgtgg tgatttttgc cgtgatgatt cccgccggct ttctgatgga
     2461 ccgggtcggc cgcaagtggt gcacggtgcc gagcacagcc attccggcgc tgattttctt
     2521 cttgatccct atgaccacga gtttcatgca gctggcgatg cttatcggca tcgccggtgt
     2581 ggcccagggg ttgtccctcg gctcgctggc gacgtccact tacgatgtcg tgcctgccca
     2641 tgtgcgcggg cggctgcaag cgctgcgccg caccatcgct gagttgggca gcggcgcggc
     2701 gccgctcttt gccggctacc tggcgaacac gttcaatccc ggcgtgccgt tcttggttta
     2761 cgcgccgctg ctcttgttgt cggcgctgtt gctcgctttt gtcagtaaag aaaccctgga
     2821 taagtagtgt agtgcctctt aaatgaaggc acttattctt cgacataacc attagcctcg
     2881 aacaaccgga aggattcac
//
LOCUS       DATIRS010001035         1706 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1849139, whole genome shotgun sequence.
ACCESSION   DATIRS010001035 DATIRS010000000
VERSION     DATIRS010001035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1706
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1849139"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1305
                     /locus_tag="VLM90_13150"
     CDS             <1..1305
                     /locus_tag="VLM90_13150"
                     /inference="COORDINATES: protein motif:HMM:NF006383.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase flavoprotein subunit"
                     /protein_id="HSQ13967.1"
                     /translation="VISEGIGTAIALETGVVALGNMEAVQFHPTPVFPAGILLTEGAR
                     GDGGLLRDGDGHRFMPDYEPEKKELVSRDVVSRRMEEHIAKGKSARSRFGDHLWLDIT
                     LLGEQHIKHNLREVFEICHYFLGIDPVKEWVPVRPAQHYTMGGVRTNHTGESPTLRGL
                     FSAGEAACWDMHGFNRLGGNSVAETVVAGMIVGEFIADFCDRSENDVSIPTRLIHETL
                     QREQAKLDVLIDGRGTENPAMLMAEMQHVMTGNVGIFRNGNRLDEAVGALQKLLLRSR
                     NIGLRYKARGANPELVTAYRVQKMLKLALCVAFGALERSESRGAHFREDFPRRDDARW
                     LKRTLATWKSEADSLPSLAYENLDVQKMELPPGWRGYGAKDYIDHPATAARLAEIDTL
                     KKNLDGADRFTIQQKLMPYEELLPERFRGKNERIDEMMEGAR"
     gene            1302..>1706
                     /locus_tag="VLM90_13155"
     CDS             1302..>1706
                     /locus_tag="VLM90_13155"
                     /inference="COORDINATES: protein motif:HMM:TIGR00384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HSQ13968.1"
                     /translation="MKDATPARRQLKINVLRFNPQDPGSVPRMQTYEIEEADGMTLFI
                     ALNEIREKQDPSLQFDFVCRAGICGSCGMMINGRPTLACRTLTKDLEPEISLAPLPVF
                     ELIADLSINTGKWMRDMSERLDAWVHMQKEEID"
BASE COUNT          387 a          464 c          520 g          335 t
ORIGIN      
        1 gtgatttcgg agggtatcgg caccgcaatc gctctcgaga ccggagtcgt cgccctcggt
       61 aacatggaag cggtgcagtt tcatccgaca cctgtgttcc ccgccggcat acttctgacc
      121 gaaggggccc gcggcgacgg cgggttgctg cgcgatggcg atggtcatcg cttcatgccc
      181 gattatgaac cggagaaaaa agagctggta tctcgagatg tggtttcgcg acgcatggaa
      241 gagcacatcg caaaaggtaa aagcgcgaga tcacgcttcg gcgatcacct gtggctcgac
      301 attacgcttt tgggtgagca acacatcaaa cacaacctgc gcgaagtttt tgagatctgc
      361 cactattttc tcggcatcga tccggtgaag gagtgggtgc cggtgcggcc ggcgcagcac
      421 tacacgatgg gtggcgtgcg cacgaatcac accggcgaaa gcccgacgct cagaggtttg
      481 ttttccgccg gcgaagcggc ttgttgggac atgcacggtt tcaaccggct gggcggcaac
      541 tctgtggccg agacggtggt ggccgggatg atcgtcggtg aattcatcgc cgatttttgt
      601 gatcgatcgg aaaacgatgt gagcattcca acccggttga ttcatgagac gctccagcgg
      661 gagcaagcga agctcgacgt gttgatcgac ggcaggggca cggagaatcc cgcgatgctg
      721 atggcggaga tgcagcacgt catgaccggg aacgtcggca tattccgcaa cggcaatcga
      781 ttggatgaag ccgtcggcgc gttgcagaaa ttattgctgc gcagcagaaa tatcggcctg
      841 cgttacaagg cgcgcggcgc caatccggag ctcgtcaccg cctatcgcgt gcaaaagatg
      901 ctcaagctag cgctctgcgt cgccttcggc gcgctcgagc gcagcgaaag ccggggagcg
      961 catttccgcg aagattttcc gcgccgcgat gacgcccggt ggctgaagcg cacccttgcg
     1021 acctggaaaa gcgaagcgga tagcctgccg tcgctcgcgt atgagaattt ggacgtgcag
     1081 aaaatggaat tgccccccgg ctggcgcggt tacggcgcca aggattatat cgatcacccc
     1141 gctacggctg cgcgcctcgc cgaaatcgac acattgaaga aaaacctcga tggcgccgat
     1201 cgcttcacaa ttcaacagaa attaatgcct tatgaggaac ttttacccga gcgctttcgc
     1261 ggcaagaatg aacggatcga tgaaatgatg gaaggtgcgc gatgaaagat gccactcccg
     1321 cccggcgcca gctgaagatc aacgtgctgc gcttcaatcc gcaggacccc ggaagtgtgc
     1381 cgcgtatgca gacttatgag atagaagaag cggacggtat gacgctgttc atcgccctca
     1441 atgaaattcg cgagaagcaa gatccatcac tccagttcga ctttgtctgt cgcgccggta
     1501 tctgcggcag ttgcggcatg atgattaacg gccgcccgac gctcgcctgt cggacactga
     1561 caaaagacct ggaacctgaa atctcactgg cgccgttgcc ggttttcgaa ttgattgccg
     1621 acctctcgat caataccggc aagtggatgc gcgacatgag tgaacggctg gacgcttggg
     1681 tgcacatgca gaaagaagaa atcgat
//
LOCUS       DATIRS010001036         1584 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1161507, whole genome shotgun sequence.
ACCESSION   DATIRS010001036 DATIRS010000000
VERSION     DATIRS010001036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1161507"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..199
                     /locus_tag="VLM90_13160"
     CDS             <1..199
                     /locus_tag="VLM90_13160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13969.1"
                     /translation="TSGIRIGTPAVTSRGMKESEMTQIGILIARAMGAVGDASKLRAV
                     ADDVGALCKNFPVYPHRLAGA"
     gene            298..801
                     /gene="nrdR"
                     /locus_tag="VLM90_13165"
     CDS             298..801
                     /gene="nrdR"
                     /locus_tag="VLM90_13165"
                     /inference="COORDINATES: protein motif:HMM:TIGR00244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HSQ13970.1"
                     /translation="MKCPFCHEIENRVIDSRLSKDSNMVRRRRECERCTRRFTTYERV
                     EEMMPLVVKKDGRREGYDRVKIINGLKRACEKRPVSINTIEAIADRIERTLQERGEKE
                     IVSSVIGEALMRELHDTDPVAYVRFASVYRSFKDIGEFMVELEELIKERKSLPHAKSG
                     DSRPRRE"
     gene            804..>1584
                     /gene="ribD"
                     /locus_tag="VLM90_13170"
     CDS             804..>1584
                     /gene="ribD"
                     /locus_tag="VLM90_13170"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: protein motif:HMM:TIGR00326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HSQ13971.1"
                     /translation="MASAQGSEQEQHYLRLACRLARKGAGRTSPNPMVGAVLVRGGKV
                     VGAGYHHFAGGAHAEINALKQAGSKAKGATLYITLEPCSHQGRTPPCTRALIAAGVRQ
                     VVAGMKDPNPLVAGRGFQQLRRAGIEVRAGLCEQEAAQLIEAFTKFITQRLPFVTVKL
                     AATLDGKIASASGDARWISGERSRARVHRWRNEMDAVLVGAGTVRADDPLLTCRIAGG
                     RNPYRVVLDSRLRIAPTAQLLHLPDAGKTIIATSKQAPVNKV"
BASE COUNT          333 a          463 c          503 g          285 t
ORIGIN      
        1 caccagcggc atacgcattg gcacgccggc ggtgaccagc cggggcatga aagaaagcga
       61 gatgactcag atcggcatcc tgatcgcccg ggcgatgggc gcggtcggcg atgccagcaa
      121 actgcgcgcg gtggccgacg atgttggcgc gctgtgtaaa aactttcccg tctatccgca
      181 tcgtttggct ggtgcgtaac tgaggatatc gtcgacgatg gaggatcgag gatagaggat
      241 ggcaattaag actttcgatc ttccatcctc gatcctccat aatcgagttt tttgactatg
      301 aagtgtccct tttgccatga gatcgagaat cgagtgatcg attcgcgctt gagtaaggac
      361 agcaacatgg tgcgccgccg gcgcgagtgc gagcgctgca cccggcgctt caccacctac
      421 gagcgggtcg aggagatgat gccgctggtg gttaagaagg atggccggcg cgagggctat
      481 gaccgggtca aaatcatcaa cggtctcaag cgcgcctgtg aaaaacggcc ggtcagcatc
      541 aacaccattg aagcgatcgc cgaccgcatc gaacggacgc tgcaagagcg cggcgagaaa
      601 gaaatcgtca gctcggtgat cggcgaagcg ctcatgcgcg agctccatga caccgatccg
      661 gtcgcctatg tgcgtttcgc ctcggtgtac cggtcgttca aagacatcgg cgaattcatg
      721 gtcgagctcg aagagctgat caaagaacgc aaaagcttgc cgcacgccaa atccggcgat
      781 tcacgcccgc gaagggaata gcgttggcca gcgcccaagg atccgaacag gagcagcatt
      841 atctacgctt ggcctgtcgt ttggcgcgca aaggcgcggg gcgaaccagc cccaatccga
      901 tggtcggcgc cgtgctcgtg cgtggcggca aggtcgtcgg tgccggctat caccactttg
      961 ccggcggcgc ccatgccgaa atcaacgcgc tcaaacaagc cggttctaag gccaaggggg
     1021 cgacgctcta tatcaccctc gagccgtgca gccatcaggg ccgcacgccg ccgtgcacgc
     1081 gagcattgat cgccgcggga gttcgtcaag tagttgccgg catgaaggat cccaatccac
     1141 tggtcgccgg gcggggtttt caacagttac gccgtgccgg tatcgaagtc cgtgccggtt
     1201 tgtgcgagca agaagccgca caactcattg aggcgttcac caaattcatc acccagcggc
     1261 tgccgttcgt cacggtcaaa ttggcggcga cgctcgacgg caagatcgcc agtgccagcg
     1321 gcgacgcccg ttggattagc ggcgagcggt cgcgcgcgcg ggtgcaccgc tggcgcaatg
     1381 aaatggacgc cgtgttggtc ggcgcgggaa cggtgcgcgc cgacgatccg ctgctaactt
     1441 gccgcattgc cggtgggcgc aatccttacc gcgtggttct cgatagccgg ctgcggattg
     1501 cgccaacggc gcagctattg catttgcccg acgctggcaa aactatcatc gcgactagca
     1561 agcaggcgcc agtgaacaaa gtgc
//
LOCUS       DATIRS010001037         1918 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1751322, whole genome shotgun sequence.
ACCESSION   DATIRS010001037 DATIRS010000000
VERSION     DATIRS010001037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1918
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1751322"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            143..1306
                     /locus_tag="VLM90_13175"
     CDS             143..1306
                     /locus_tag="VLM90_13175"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HSQ13972.1"
                     /translation="MVSFRALIGACLLLLAGSAEVPGAVASKDLDGIKRRIESEKKGL
                     SQLQIKEGGVLKALDKIEHDLDKKTKNLKVADGQYNAILGAIQKTEAEALKVRGSISQ
                     RESLFRQRAAALYRWQRSADPFWFVNGAGALSAILKRQRYFAATLAFDRGLIGELQSD
                     SQRQESLRRQLSEQKDRLAAQKKLLVLARAAVAQEMDKKQFLLMSLRQEKAYRLKALR
                     DMAVAAQRLQQMLDEIARRAIVRPRELPTPSSTGRGLEPMLGQLDWPVKGPVTAPFGK
                     FKHPEFAAEVVRKGIDIDATLGDGVRAVEKGRVVFADRFTGYGRMVIVDHGERYYTVY
                     GHLSEIIRKTGEELGRGEVLGRVGDSDSLSGAKLYFELRKDGRSIDPLPWFKR"
     gene            1372..>1918
                     /locus_tag="VLM90_13180"
     CDS             1372..>1918
                     /locus_tag="VLM90_13180"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HSQ13973.1"
                     /translation="MRLVKRHGTPLLLIVLGIGIGFFVSAQWVPNVSAVGRQDYESLE
                     AFSNILSIVKKNYVEDVETKNLVNGAINGMLNSLDPHSAYLTPDLYKDLQSDTQGRFG
                     GLGIEITVKGGMLTVVSPIEDTPAYKAGIKPGDQIFKIEDEFTKDMSLVDAVKKMRGL
                     KGTTINLTIRRENATDLIDVSL"
BASE COUNT          436 a          512 c          583 g          387 t
ORIGIN      
        1 atgccgtggg gctgtctgaa cttgttcctg ctctcggccg gatggagttt ctcgatggcc
       61 tcagtatcgc cttggtgctg gccatcggcg gtgtgctcgg cgcttcggca agtctattcg
      121 ccgcgcgggg gatggtgcgc tcgtggtaag cttccgcgcg ttaatcggcg cgtgcttgtt
      181 gctgctggcc ggctccgcag aggtgccggg cgcggttgcg agcaaggatc tcgatggcat
      241 caagagaaga atcgagagcg aaaaaaaggg tctatctcag ctgcaaatca aagaaggcgg
      301 cgtgctcaaa gcgctcgaca aaattgagca cgatctcgac aagaaaacca agaacctcaa
      361 ggtggccgat ggtcaataca acgcgatcct cggcgcgatc caaaagaccg aggccgaggc
      421 gctcaaggtg cgtggctcga ttagccaacg cgagtccttg tttcggcagc gcgcggccgc
      481 gctctaccgc tggcaacgca gcgccgatcc gttctggttt gtcaacggcg ccggcgctct
      541 gagcgcaatc ctgaaacgcc agcgttactt cgcggcgacg ttagctttcg accggggatt
      601 gatcggcgaa ttgcagagcg acagccagcg ccaggaaagt ttgcggcgcc aactgagcga
      661 gcagaaggat cgcttggcgg cgcagaaaaa gctgttggtg ctggcccgcg ccgcggtggc
      721 gcaggagatg gataaaaagc aatttttatt gatgagtttg cgccaggaaa aagcttacag
      781 actcaaagcc ttgcgcgaca tggcagtcgc ggcgcagcgg ctgcagcaaa tgctcgacga
      841 gatcgcccgc cgggcgattg tcagaccgag agaattacct acgccgtctt ccacgggacg
      901 cggtctcgaa cctatgcttg ggcagttgga ctggccggtc aagggcccgg tgaccgcgcc
      961 ctttggcaaa ttcaaacatc ctgaattcgc cgccgaggtg gtccgcaagg gcatcgacat
     1021 cgacgcgacg cttggcgacg gcgtgcgagc ggtggaaaag ggccgtgtgg tattcgctga
     1081 ccggtttacc ggctatggcc gcatggtgat cgtcgatcat ggcgagcgtt actatacagt
     1141 ttacggtcat ctttctgaaa tcattaggaa aaccggcgaa gaactgggcc gcggcgaggt
     1201 cctgggacga gtcggtgata gcgattcgct cagtggcgcc aagctttatt ttgagctgcg
     1261 caaagacggc cgctccatcg atcccctgcc gtggtttaaa cgatagctat tgcgcaacca
     1321 ttgagctaga attataagct agttatcagc gaatatttag ggagaaattt gatgcgactt
     1381 gtgaagcgac atggaacacc actgctactg atcgtccttg gcatcggcat cggctttttc
     1441 gtctccgccc agtgggtacc gaacgtatcg gcggttgggc ggcaggacta cgaaagcctg
     1501 gaagccttca gcaacattct gtccatcgtt aagaaaaact acgtcgagga tgtcgagacc
     1561 aaaaacttgg tcaacggcgc catcaacggc atgttaaatt ccctggatcc ccatagcgcc
     1621 tacttgacgc ccgatctcta caaggatctg caaagcgata cccagggacg attcggcggc
     1681 ttaggcatcg agatcaccgt aaaaggcggc atgctgaccg tggtttcgcc gatcgaagat
     1741 accccggcgt acaaagccgg tatcaagccg ggcgatcaga tttttaagat cgaagacgaa
     1801 ttcaccaaag acatgtcgct ggtggacgca gtgaaaaaaa tgcgcgggtt gaagggcacc
     1861 acgatcaatc tgacgatccg gcgcgaaaac gccaccgatc tcatcgacgt ctctttgg
//
LOCUS       DATIRS010001038         2221 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1063034, whole genome shotgun sequence.
ACCESSION   DATIRS010001038 DATIRS010000000
VERSION     DATIRS010001038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2221
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1063034"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(246..1625)
                     /locus_tag="VLM90_13185"
     CDS             complement(246..1625)
                     /locus_tag="VLM90_13185"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HSQ13974.1"
                     /translation="MNPLREKLTKIIEPERISANAEYLDELAWDALSEGRFHPHHQPQ
                     LASPLCAVAPVSTDEVQKLVRFANQENLSIVPFGGGSGLMGGALSIRPGLVIDLRRMN
                     RILAIDSESRCARVQAGAVLEAVDLALNQAGFILGHDPWTVPVATIGGAISTNSVGYR
                     AGIYGSMGEQVLGLEAVMPNGEVLHTRPVQKHSAGLNLNSLLIGGEGCFGIITEATIR
                     IFPKPEARLFRGYLFASFEQGYGAIQEMFHRRLRPAMLDFGDDAEQHGGSILYLVFVG
                     NQELTAVEERQAVALCQAHGGKELPRSDAEEFWRERHEIARRFARNRRQRRERGRDGI
                     FRDWIHVALPSSKVLAFRSAAQEIVERHGVRLQESGLWVQPELFSMRLGAEDVAVANP
                     QLALQEAIEELLRLVQNIGGSMEYTHGVGVKLAPLMAEEHGYGLQVMRQIKKILDPNN
                     VLNPGKMAL"
     gene            complement(1721..2137)
                     /locus_tag="VLM90_13190"
     CDS             complement(1721..2137)
                     /locus_tag="VLM90_13190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13975.1"
                     /translation="MKPILSAIMILALGLVLAGEVGAGPRRAMVAPRANSGVTFFAGG
                     ASNRVIVQRQFYGAYPYYYQPYSPPVLVVSPYAPAYILPPTVVVTEPYFCVLHNEGYV
                     SRIGLLDHLAGTHKIPLNAATSLCPDGGASCVFPSY"
BASE COUNT          522 a          683 c          602 g          414 t
ORIGIN      
        1 ggcatcgtca ccgagcgcga tttcctggcc ctcggaaacc aagatcacct gtctgcgtcc
       61 ggtatagggc gcggcggaac aactacaaac caacagtccg acgtaaacca gcatgagcca
      121 ttttttcata gacaccccag cggcgatgcg agtagcttca atcaaaaaat agcgtttgga
      181 atcgaccagc gcaagaaatc cctggcgctg aaagttagac gttgaccaag cttgagaacg
      241 tcaaactaca aagccatttt ccccggattg agaacgttgt tgggatcgag aattttctta
      301 atctggcgca tgacttgtaa accgtagcca tgctcctcgg ccatcagcgg cgcgagtttg
      361 acgccgacgc catgggtgta ctccattgaa ccgccgatat tttgaaccag gcgcaaaagc
      421 tcttcgatcg cctcctgcaa agccagttgc gggttggcga cggcgacatc ttcggcgccc
      481 agccgcatgg agaaaagttc cggctgcacc cataggccgc tttcttgtaa acgcacacca
      541 tggcgctcga cgatctcctg ggcggcgctg cggaaagcca aaactttcga gctcggcagc
      601 gcgacatgga tccaatcgcg aaaaatccca tcccggccgc gctcgcgccg ctggcggcga
      661 ttacgtgcaa accgcctggc gatctcgtgg cgctcgcgcc aaaactcctc ggcatcgctg
      721 cggggcagtt ccttaccgcc atgggcttga cataaagcta ccgcctgtct ctcctcgact
      781 gcggtcaact cttgattgcc cacgaagacc aagtaaagaa tcgagccgcc atgctgctcc
      841 gcatcgtcgc cgaagtcgag cattgccggc cgcagccgcc ggtgaaacat ctcctgaatc
      901 gccccgtacc cctgctcgaa cgatgcgaaa agatagccgc gaaacagcct cgcctcaggt
      961 ttaggaaaga tacgaatcgt cgcctcggtg atgatgccga aacaaccctc gccaccgatg
     1021 aggagcgaat tgagattcaa ccccgccgag tgcttctgca ccggccgcgt gtgtaggact
     1081 tcgccgttcg gcatgacggc ttccaagccc agaacctgct cgcccatgga gccgtaaata
     1141 ccggcacgat aaccgacgct attggtcgag atcgccccgc cgatagtcgc caccggcacc
     1201 gtccagggat catggcccaa gataaagccg gcttgattga gcgcgagatc cacggcttca
     1261 agcaccgctc ccgcctggac gcgtgcacaa cgagactcgc tatcgatggc gagaatacgg
     1321 ttcatccgcc gcaagtcgat caccaggccg gggcgaatcg acagcgcgcc gcccatcaat
     1381 cccgagccgc cgccgaacgg aacgattgac aagttttctt gattggcgaa acgaaccagc
     1441 ttttgcacct cgtcagtcga aaccggcgcc accgcgcata acggcgacgc gagttgcggc
     1501 tgatggtgtg gatggaatcg gccttcactc agcgcgtccc aagcaagctc gtccaaatat
     1561 tcagcattcg ccgagatccg ctccggctcg atgatcttcg tgagtttttc gcgcaatggg
     1621 ttcataggat tgaggttgtc tttgccgaca agacgttctc caacctatac cgcaatcgcc
     1681 actgaggatc gacagacgac aaaactgccg accgtgaaat ctaataggaa ggaaacacgc
     1741 agcttgcgcc gccgtcaggg cacagacttg tcgccgcatt aaggggaatc ttgtgggtgc
     1801 cggcgagatg atcgagcagg ccgatccggc tgacataacc ttcgttgtgc agcacgcaga
     1861 agtacggctc cgtaaccacc acggtcggcg gcaggatgta cgctggcgcg tatggtgaaa
     1921 ccaccagcac gggaggagaa taaggctgat aataataggg ataagcgcca taaaattgcc
     1981 gctggacaat aacccggttg gaagcgccgc cggcaaagaa cgttacccca gagttggcgc
     2041 gcggcgccac catcgcccgc cgcggtcccg cgcctacctc gcccgcgagg accaacccaa
     2101 gagctaatat cattatcgcg ctgagaatcg gcttcatttc tgcctcccta cggcatcctc
     2161 ggcgtagcaa tgcaaaatgt tagacgttcg agaaggctac atgttaattg agcgaccggc
     2221 a
//
LOCUS       DATIRS010001039         1874 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1751524, whole genome shotgun sequence.
ACCESSION   DATIRS010001039 DATIRS010000000
VERSION     DATIRS010001039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1874
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1751524"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..184)
                     /locus_tag="VLM90_13195"
     CDS             complement(<1..184)
                     /locus_tag="VLM90_13195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13976.1"
                     /translation="MESPSRGSLQGLTVVCFESRRAKEMAELIRRYDGAPLVAPSMRE
                     VPLSENRAALELVSQIE"
     gene            complement(202..831)
                     /locus_tag="VLM90_13200"
     CDS             complement(202..831)
                     /locus_tag="VLM90_13200"
                     /inference="COORDINATES: protein motif:HMM:TIGR01470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional precorrin-2
                     dehydrogenase/sirohydrochlorin ferrochelatase"
                     /protein_id="HSQ13977.1"
                     /translation="MNYYPIYLNMTERRCLVIGGGAVAERKIAGLLEAGAKLTVVSPA
                     ITDTIAHWAKDHAIELIARHYQASDLTEHEIVFVATDDGAVNAQVFSDGRRLGVWVNA
                     VDDPEHCDFILPSVLRRGDLSIAVSSGGTSPALSRTIREELELYFTDEYTLLAKLAAE
                     ARAELHGRGVSVPFATWRRALSGDVRQLLMRGDVARAKALLLRELGVEA"
     gene            complement(1015..>1874)
                     /gene="cobA"
                     /locus_tag="VLM90_13205"
     CDS             complement(1015..>1874)
                     /gene="cobA"
                     /locus_tag="VLM90_13205"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: protein motif:HMM:NF004790.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004851 - uroporphyrin-III
                     C-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0019354 - siroheme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HSQ13978.1"
                     /translation="KNWWIVKVGSMTMKVGRVYLVGAGPGDPGLMTVRGLQLLRSAQV
                     VVYDQLVNPVLLDELSVDAERIFVGKKAGHHCIAQSEINEVLIAYADRGHEVVRLKGG
                     DPFVFGRGGEEAEALADAGVPFEIVPGVSSAVAVPAYAGIPLTHRDYASSFAVVTGHE
                     AIKSKSTVDWAKLATAVDTLVILMGLHNLPAIVAKLLSHGRSPNTPVAVIRQGTTQQQ
                     TTVAGTLADIVDRSFAIKAPALIVVGDVVRLKSTLDWFLPNSLNDATPAELDRLTVSN
                     DSLTASRGA"
BASE COUNT          383 a          614 c          524 g          353 t
ORIGIN      
        1 cttcgatctg cgacacgagt tcgagcgccg cgcggttttc gctgagcggc acctcgcgca
       61 tggacggcgc gaccagcggc gcgccgtcat aacggcggat gagttccgcc atctctttgg
      121 cgcgccggct ctcgaagcag acgactgtga gcccctggag actcccacgg ctaggcgatt
      181 ccatagtaag cttattccag cctacgcttc tacgcccaat tcgcgcagca acagcgcctt
      241 ggcgcgcgca acatcgccgc gcatcagcag ttggcgcaca tcgccgctca aggcgcgacg
      301 ccaggttgcg aagggcacgc tcacgccgcg cccatgcagc tcggcgcgcg cctccgcggc
      361 tagttttgcc agcaatgtat attcatcggt gaagtaaagc tcgagctctt cgcggatggt
      421 gcgcgacagc gccgggctgg tgccgccgct cgacaccgcg atactgagat cgccgcggcg
      481 caaaaccgac ggcaaaatga aatcacaatg ttccggatcg tccaccgcgt tcacccacac
      541 gcccaaccgc cggccgtcgc tgaacacctg cgcattcact gcgccgtcat cggtggcgac
      601 aaagacgatt tcatgttcgg ttagatcgct ggcctggtag tggcgggcga ttagctcgat
      661 cgcatgatct ttcgcccagt gcgcgatggt atcggtgatc gccggactga cgacagtcag
      721 tttggcaccg gcctcaagca ggccggcgat cttgcgctcg gcgaccgccc cgccgccgat
      781 caccagacag cgccgttcgg tcatgttcag atagatggga taatagttca tcggcgtttc
      841 cactcggtgt tagaagtatc gctggttgcg aatctaaccc gtgatggcta tcccagacaa
      901 acggttggtc gccgaaataa tccatcccgt gggcccagtc catgagttcc tcggtcgcca
      961 atcgttcgag atcgccgccc cactctctgg cttctgcaaa ttcacgcgcc atattcacgc
     1021 acctcgcgac gccgttaacg aatcgttgga aaccgtcagc cgatctagtt ccgccggcgt
     1081 agcatcgttg agcgaatttg gcaggaacca atcgagcgta cttttcaaac gaaccacgtc
     1141 accgaccacg atcagcgccg gcgctttgat ggcaaacgaa cggtcgacga tatccgccag
     1201 cgtgccggcc acggtcgttt gttgctgcgt cgttccctgg cgaatcaccg ccaccggcgt
     1261 attgggcgaa cggccatggg acagcagctt ggcgacgatc gccggcagat tgtgcaaccc
     1321 catcaagatc accaaagtgt ccaccgccgt cgccagcttc gcccagtcga cggtagattt
     1381 agacttgatc gcttcatggc cggtgaccac ggcgaacgag gaagcatagt cgcggtgcgt
     1441 caggggaatg ccggcatagg caggaaccgc gaccgccgaa ctgacgccgg gaacgatttc
     1501 gaagggaaca ccggcgtcgg ccagcgcttc ggcttcctcg ccgccgcggc cgaagacaaa
     1561 cggatcgccg cccttcaagc gcacgacttc atgaccgcgg tcggcgtaag cgatcaaaac
     1621 ctcgttgatc tccgactgag cgatacaatg gtgaccggcc ttcttgccga caaatattcg
     1681 ctcggcatcg actgacagct catcgagcag caccggattg accagctgat cgtagaccac
     1741 gacttgcgca ctgcggagca attgcaaacc gcgcacggtc atcaaccccg gatcacccgg
     1801 ccccgcgcca acaagataga ctctgcctac cttcatagtc atgctcccga cttttactat
     1861 ccaccagttc ttaa
//
LOCUS       DATIRS010001040         2939 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_570407, whole genome shotgun sequence.
ACCESSION   DATIRS010001040 DATIRS010000000
VERSION     DATIRS010001040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2939)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2939)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2939
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_570407"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1659
                     /locus_tag="VLM90_13210"
     CDS             <1..1659
                     /locus_tag="VLM90_13210"
                     /inference="COORDINATES: protein motif:HMM:NF012364.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase domain-containing protein"
                     /protein_id="HSQ13979.1"
                     /translation="QQRDPDVVEGHNLFRFDLEYIEARAKRHKIALNFGRNGSRMSGH
                     ASRMQMAERTITYRKYEIFGRHIIDTWILAQHYDVATRELESFGLKDIARHFGIAGAE
                     RTYVPGDKTSWYFDHDPDTLFRYALDDVRETRAISEILSPSYFVEAQIFPFSYQNIPL
                     RGNATKIDALFLREYLHQRYSVPYPDEVGNVVGGFTDMEHQGTANRVLHCDVTSLYPS
                     IMLVYKYLPKKDELGVFPGLLSDLRAFRVKAKELARDAVDEEGRVYFNALQSTFKILI
                     NSFYGYLGFQLAHFNDFSAANQITAKGRELIQSAVAWLKAKDAKIIEVDTDGIYFVPP
                     ESVKSAKDEEKLIDDLGEILPKGIELELDGRYPAMFSYKMKNYALLDEQGRLRIKGSG
                     LRSRGLELFQREWLEEMLTLLLKGEKEKIPELYARYADDIAHHRRDISWLAKTETLQD
                     TLENYQAKVKAKKRNAAAPYELALKAERPYQAGDQIAYYVTGTKAKVKISGNCKLASE
                     WDAKNPDENVEHYKAKLKELYEKFRPWMEGDGTASQEPELAIED"
     gene            1703..2437
                     /locus_tag="VLM90_13215"
     CDS             1703..2437
                     /locus_tag="VLM90_13215"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSQ13980.1"
                     /translation="MGNKVALITGGAKGIGRAVALDLAARDWSVAICYRTSAREADEV
                     IDGVKQHGSSGLALQCDVSKADAAVAMVERVHQEFGRIDALINGAGPYHRVSLLQETN
                     AGWHDMFDNNLHPVFYLTQAVVPIMKAQKWGRIVSFSMANAEQLIAQPQLTAHYITKV
                     GLLALSRSFAKLIAPDGITMNCVSPGFIDSGSAPKEELDRMVKMIPAGYVGSVDDAVA
                     AVRYLLSDDARYVNGANIQLSGAWGV"
     gene            2476..>2939
                     /locus_tag="VLM90_13220"
     CDS             2476..>2939
                     /locus_tag="VLM90_13220"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSQ13981.1"
                     /translation="MATTKDQERAIELIGEAMKLQMAEEFDDAIRLYKESIALYPTAD
                     AHTYLGWAYSFKGRLNEAIAQCEIAIEIDPEFGNPYNDIGVYLMQQQKLDDAIPWLER
                     AKSAKRYEPRHFPYINLGRVYLTKGMIQKTLEEFGGALQINPGDRELAQLTE"
BASE COUNT          714 a          893 c          787 g          545 t
ORIGIN      
        1 cagcagcgcg accccgacgt cgtcgagggc cacaatctct tccgcttcga tctggaatat
       61 atcgaggcgc gcgccaagcg ccacaaaatt gcactcaact tcggccgcaa tggctcgcgt
      121 atgagcggcc acgcgtcgcg catgcagatg gccgaacgaa cgatcaccta tcgcaaatac
      181 gaaatcttcg gccgccatat catcgacacc tggatcctcg cccaacatta cgatgtcgcc
      241 acgcgggagc tcgaaagttt cggcctgaaa gacatcgcgc gccatttcgg catcgccggc
      301 gcagagcgca cctacgtgcc gggggacaaa accagctggt acttcgatca tgatcccgac
      361 acgttatttc gctacgccct tgacgacgtg cgcgagaccc gggcgatctc ggagatcctg
      421 tcgccgagct acttcgtcga ggcgcagatt tttccattca gctaccagaa cattccattg
      481 cgcggcaatg cgacaaagat cgacgccctg tttttgcgcg aatacctgca tcagcgctat
      541 tcggtaccct atcccgacga agtcggcaat gtcgtcggcg ggtttaccga tatggagcac
      601 caaggcacgg ccaaccgcgt gctccactgc gatgtcacct cgctctaccc gtcgatcatg
      661 ctggtttata aatatctgcc gaagaaagac gagctcggcg tttttcccgg cctgttgagc
      721 gatctgcgcg ccttccgcgt caaagccaag gaactcgccc gcgacgctgt cgacgaggaa
      781 ggccgagtct atttcaacgc cctgcaatcg acgtttaaaa ttctcatcaa ttcgttctac
      841 ggctacctgg gctttcagct ggcgcacttc aacgatttca gcgcggccaa ccagattacg
      901 gccaagggcc gcgagttgat ccaatccgcc gttgcctggc tgaaagccaa ggacgccaag
      961 atcatcgaag tcgacaccga cggcatctat ttcgtcccgc cggagagtgt caaatccgcc
     1021 aaggacgaag agaaactgat cgacgatctc ggcgagattc tgcccaaggg catcgaactc
     1081 gaactcgacg gccgctaccc ggccatgttc agctacaaga tgaaaaacta tgccctgctc
     1141 gacgagcaag gcaggctgcg catcaaaggc tccgggctgc gctcgcgcgg gttggagttg
     1201 ttccagcgcg aatggctgga ggagatgctg acgctgctgc tcaaagggga gaaagaaaag
     1261 attcccgaac tttatgcgcg ttatgccgat gacatcgccc atcatcgcag agatatttct
     1321 tggctggcaa aaaccgagac tttgcaggat acgctggaaa actatcaagc caaagtcaaa
     1381 gccaaaaagc gcaacgccgc cgccccctac gaactggcgc tcaaagccga acgcccctat
     1441 caagccggag atcagatcgc gtactatgtc accggcacca aagccaaagt gaagatcagc
     1501 ggcaactgca aactcgcctc ggaatgggac gccaagaacc cggacgaaaa cgtcgaacat
     1561 tataaagcca agctcaaaga gctttacgaa aagttcagac cctggatgga aggcgacggc
     1621 actgcgagcc aggaaccgga actagcaatc gaagattgaa attgtagaat ccaagtgtcg
     1681 actctcccgc tcgatcgacc ttatgggcaa taaagttgct ttaatcaccg gcggcgccaa
     1741 gggcatcggc cgcgccgtcg ctttggatct ggccgcgcgc gattggtctg tcgccatctg
     1801 ttatcggacc agcgcccgcg aagcggacga ggtcatcgat ggcgttaaac aacatggcag
     1861 cagcggattg gctctccaat gcgacgtctc caaggctgat gcggcggtgg caatggtcga
     1921 gcgcgtgcac caggaattcg gccgcatcga tgccctgatc aacggcgccg gcccctacca
     1981 ccgcgtctcg ctgctgcagg aaaccaacgc cggttggcac gacatgttcg ataacaatct
     2041 ccacccggtt ttttatttga cccaggcggt cgtgccgatc atgaaagcac agaagtgggg
     2101 acgcatcgtc tctttcagca tggccaacgc cgagcagctg atcgcccagc cgcagctcac
     2161 cgcccattac atcaccaagg tcggcctttt ggcgttatcc cgctcgttcg ccaagttgat
     2221 cgcgccggac ggcatcacga tgaattgcgt ctcacccgga tttatcgatt ccggcagcgc
     2281 ccctaaagaa gaactggacc gaatggtgaa aatgattccc gccggctatg tcggcagcgt
     2341 cgacgatgcg gtcgcggcgg tgcgctatct gctttccgac gacgcgcgtt acgtcaatgg
     2401 cgcgaacatt cagttgagcg gcgcctgggg agtttgaaaa agctcgcggc aaaagagtaa
     2461 gctaacggca aaaatatggc cacgaccaaa gatcaagagc gcgccatcga actgatcggc
     2521 gaggcgatga aactgcagat ggcggaggag ttcgacgacg ccatccggct ctacaaagaa
     2581 tccatcgcgc tctaccccac cgccgacgcc cacacctatc tcggctgggc ttatagcttc
     2641 aaaggccggt tgaacgaagc catcgcccaa tgcgagatcg ccatcgaaat cgaccccgag
     2701 ttcggcaatc cctataacga catcggcgtc tacttgatgc agcagcaaaa actcgacgat
     2761 gccatcccct ggctcgagcg ggccaagagc gccaaacgct acgagccgcg ccattttcct
     2821 tacatcaatc tcggacgggt ttacctaacc aagggcatga ttcaaaagac gttggaagaa
     2881 tttggcggcg ccctgcagat caatccaggc gacagagaac tcgcccaact caccgaaga
//
LOCUS       DATIRS010001041         1692 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1751841, whole genome shotgun sequence.
ACCESSION   DATIRS010001041 DATIRS010000000
VERSION     DATIRS010001041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1692
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1751841"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1692)
                     /gene="mfd"
                     /locus_tag="VLM90_13225"
     CDS             complement(<1..>1692)
                     /gene="mfd"
                     /locus_tag="VLM90_13225"
                     /inference="COORDINATES: protein motif:HMM:TIGR00580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003690 - double-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HSQ13982.1"
                     /translation="NQSFRLPETHLIFLTFDEIFGTRKRQPAPSKSHPSHFLTSLSEL
                     KQDDFVVHLDHGIGVYRGLKFLKVAGVEGEFLHLEYAGGDRMYLPVDRINIVQKYIGG
                     DGAQPALDRLGGTAWEKVKAKARKSILAMAEELVQLYALREARAGTAFAPPDNLYKEF
                     EAAFEYEETPDQQRAIDDTLDSMQSKKPMDRLICGDVGYGKTEVAMRAAFLAVEGGKQ
                     VALLAPTTILAQQHLQTFRHRFRNHPVRVEMVSRFLTAKEIAQVLQDTAQGKVDVVIG
                     THRLLQKDVEFKDLGLVIVDEEHRFGVVHKERLKKLRQTVDVLSLTATPIPRTLHMSL
                     VGIRDLSIIETPPVDRLAIQTYVTRYDERLIHDTILRELERGGQVFFLHNRVETIDRL
                     ALKIADLVPEAKVAVAHGQMRPKVLEKVMLDFLENRTQVLVCSAIIESGLDFPNANTI
                     IINRADKFGLAQLYQLRGRVGRSHRHAFAYLLIPGEKAITPDAERRLRALQEIDGLGG
                     GFKLALHDLEIRGAGNLLGDQQSGQITAVGFELYTEMMEKAIQELKGEEVLPEIE"
BASE COUNT          334 a          495 c          489 g          374 t
ORIGIN      
        1 gttcgatctc cggcaggact tcttcgccct tgagctcctg aatcgccttt tccatcatct
       61 cagtgtaaag ctcgaaaccc acggcggtaa tctgacccga ttgctggtcg ccgagaagat
      121 tgccggcgcc gcgaatctcc aaatcgtgca gcgcgagctt aaaaccaccg ccgagcccgt
      181 cgatttcttg gagtgcgcgc aagcgtcttt ccgcgtccgg cgtaatcgct ttctcgcccg
      241 gaatcaataa ataagcgaag gcgtggcgat gggagcggcc gacccggccg cgtaattgat
      301 agagctgcgc caggccgaat ttatcggcgc ggttgatgat gatcgtgttg gcgttgggga
      361 agtcgaggcc ggactcgata atcgccgagc ataccagcac ctgtgtcctg ttttcgagaa
      421 aatcgagcat gaccttttcg agcactttcg gacgcatctg gccgtgggcc acggcaacct
      481 ttgcctcagg aacgagatcg gcaatcttca gcgccaagcg atcgatcgtc tcgaccctgt
      541 tgtggagaaa aaatacttgc ccgccgcgtt cgagctcgcg caggatcgta tcgtggatca
      601 gccgctcgtc atagcgagtc acataagttt ggatcgccag gcgatccacc ggcggcgttt
      661 cgatgatgct taagtcgcgg atgcccacca gcgacatatg cagtgtgcgc gggatcggcg
      721 tcgctgtgag actcaacacg tcgaccgttt ggcgcagctt cttgagcctt tctttgtgga
      781 ccacgccaaa gcgatgttcc tcgtcgacaa tcaccagacc gaggtctttg aattcgacat
      841 ccttctgcag caagcgatgc gtgccgatga cgacgtcgac tttgccctgc gcagtgtcct
      901 gcaatacctg ggcgatttct ttggcggtca gaaagcggct gaccatttcc acccgcaccg
      961 gatgattgcg aaagcggtgg cgaaaggtct gcaagtgttg ctgcgccaag atcgtcgtcg
     1021 gcgccagcaa agcaacctgt ttgccgcctt cgacggcgag aaaggccgcg cgcattgcca
     1081 cctcggtctt gccgtagccg acatcgccac aaatcaaacg gtccatcggt tttttgcttt
     1141 gcatgctgtc cagcgtgtcg tcgatggcgc gctgctgatc gggcgtctct tcgtattcaa
     1201 aggccgcttc gaactctttg tacagattgt ccggcggcgc aaacgcggtg ccggcgcgtg
     1261 cctcgcgcaa ggcgtaaagc tggaccaact cctcggccat ggcaaggatt gacttgcgcg
     1321 ctttcgcttt gaccttctcc cacgctgtcc cgcccaagcg gtcgagggcg ggctgggcgc
     1381 catcgccacc gatgtatttc tgcactatgt tgatgcggtc caccggcaga tacatgcgat
     1441 cgccgccggc gtattccagg tgcagaaact caccttcgac accggcgact ttaagaaact
     1501 tgaggccgcg gtaaacgccg atgccgtgat ccaaatgcac aacgaaatcg tcctgcttga
     1561 gctcactcag gctggtgaga aaatggctcg gatggctttt cgacggtgct ggctggcgct
     1621 tgcgcgtgcc gaaaatctcg tcgaaggtga ggaagatcaa atgcgtttcc ggcaggcgaa
     1681 agctctggtt ca
//
LOCUS       DATIRS010001042         4492 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_964491, whole genome shotgun sequence.
ACCESSION   DATIRS010001042 DATIRS010000000
VERSION     DATIRS010001042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4492)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4492)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4492
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_964491"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(312..1373)
                     /locus_tag="VLM90_13230"
     CDS             complement(312..1373)
                     /locus_tag="VLM90_13230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13983.1"
                     /translation="MVNPMMKLAQLTCCLLVACVAAGAQAQAPFYEGKNVLLVSGTDA
                     GGAGDLRTRAILAPLKKHIPGHPNIVVQYMPGAGGRRAANHLYKSVKPDGLTLGAMIT
                     GMIQGTLFGESDVLYDIDKFIYLGSHARYAPYGFISRKGAGFTTKERLAAATGVRIGA
                     PSVGHSLYTMARLFAYIFELKEPRFVTGYTPREIDFALERNEIDARVSILDSLLTRNA
                     HWLDKDMVDINATMDIPKDISYSHPRLAKLLEIEALARSNQERRLIALFRGARGTGQP
                     FVLPPATPPDRVKILREAMRNAFADPDYVKSYEKLTAEPAMPITPEEFEKQLREIPRE
                     PEIIDLFKKLSGPGPLPKR"
     gene            complement(1366..2202)
                     /locus_tag="VLM90_13235"
     CDS             complement(1366..2202)
                     /locus_tag="VLM90_13235"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSQ13984.1"
                     /translation="MLKTIGLIEGHYECRSLDETLPVFTDLLAMEIVERKAGQATIKH
                     PNTDWRLIVHEGGPGAPEKTFDNHYGFRVATHTEVEAAWEYVEAHKDQYRISKITKPQ
                     SAHFAYSIYFHEPGGNHLEIEYYNPGGALHGRSHTAGHWDNTLNSERFPGRGYVPQAF
                     THGTLQCDDVERSRRFYVEVLGLEIAAGFNTAQYIKHPATPWYLVVLQRSPRQYLAPV
                     NRFTLQLGTAAEVEQAQREFVSNKKSLGLNEITEINRAAGTVNFIFSDLDKNWWELTA
                     NG"
     gene            complement(2293..3282)
                     /locus_tag="VLM90_13240"
     CDS             complement(2293..3282)
                     /locus_tag="VLM90_13240"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13985.1"
                     /translation="MGKLFYCAPFSLIAALLCAGPAPAQTIKVPYVSISGFQAPLYLG
                     ERAGLFKKNQLDAQLIYMPGGSLIVQTLLSGDVGVASLAPPSAVSAWAKGAELAIVAG
                     GIERVLNVLMVNPKIKRADELKGKRVAISRFGSLSDTSLRDALAYHKLKTQDISIVQM
                     GGLGERMVALTSGIVDGAVLNVDQLYQAEKLGFHVLIDMRKLPLNYSTQGIVVSREFL
                     RAQRAVVKRFLRVYIEGIKIFKTDKEFSIETLGRYIKTNDREVLAKTYDFYREAWESV
                     PTVRREGIQQALDSIPEGKNPKLNLDNLIDNSLIHELDKEDFLKALYPEGLKR"
     gene            complement(3377..3574)
                     /locus_tag="VLM90_13245"
     CDS             complement(3377..3574)
                     /locus_tag="VLM90_13245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ13986.1"
                     /translation="MKEAYAIQAQHMLRMPRTSLDGVRTILEGMEKLPGAKGADPRRF
                     VDFTILDELEKEGFVKNLYKN"
     gene            complement(3610..4380)
                     /locus_tag="VLM90_13250"
     CDS             complement(3610..4380)
                     /locus_tag="VLM90_13250"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ13987.1"
                     /translation="MNKLVELRQVLIALIAGAFILAPRLAGAAETAKLTPLRLAYSAI
                     SVNQAIPWIAVEAGHFRKHGLDVEVIHASSITALQALLAGEVAVAQSVTDACVSANLS
                     GADTLFLGAILDKPLYSFIVNGKIKTPQDLKGKRVGVTRFGATPDALARSMLKMWNLD
                     PATDVQMIQLNEMGLLVQGLVNGVIDAAPISIPSNIRAKNLGFVELFDMTKISKPYIT
                     GTIVTRQRFIDGQRDTAKRFMRGFLEGPISKTKSSASR"
BASE COUNT          841 a         1191 c         1402 g         1058 t
ORIGIN      
        1 atcatgcgga cccaacttgt tggctggaca cgggggttga agcagaggcc tcatagttac
       61 cccttccccc tttggaaaag ggggattgag agggatttgg ttgtggcgtg gggaggtttc
      121 tttagcacta gcgcggcatt ccagttctat aaatggagtt gtgtaggcgc gacaaatctc
      181 ccctagcccc tcttttccaa agagggggac cggaaacccg ccgcgactcg agtgctttac
      241 aataattcgt agactctccc gcacccgccg tgtccagccg aaacttatgg gtaacgatgt
      301 gatgttagcg gctagcgctt cggcagcggc cccgggccgg atagcttttt gaatagatcg
      361 attatttccg gttcacgggg gatttcgcgc agctgttttt cgaactcttc cggggtgatc
      421 ggcatggccg gctcggcggt gagtttctcg tagctcttga cgtaatcggg gtcggcgaag
      481 gcgttgcgca tggcttcgcg taaaatcttt actcggtcgg gcggtgtggc gggcgggagg
      541 acaaacggct ggccggtgcc gcgggcgccg cgaaataggg cgatcaagcg gcgttcctga
      601 ttagacctag ctagggcttc gatctcgaga agtttagcca gccgcggatg gctgtaactg
      661 atgtctttgg ggatgtccat ggtggcgtta atgtcgacca tatctttgtc gagccaatgg
      721 gcattacgcg tcagcaagct gtccaggatg ctcactcggg cgtcgatctc gttgcgctcc
      781 aaggcgaagt cgatctcccg cggcgtgtag ccggtgacaa agcgcggctc ttttagctcg
      841 aaaatgtaag cgaacagccg cgccatggtg tacaggctgt gaccgacgga gggagcgccg
      901 atgcgcacac cagtggcggc ggcgagtctt tccttggtcg tgaagccggc gcctttgcgg
      961 ctgatgaagc cgtagggcgc atagcgcgcg tgggagccaa gatagatgaa cttgtcgatg
     1021 tcgtagagca cgtcgctctc gccgaacagc gtgccctgga tcatgccggt aatcatggcg
     1081 cccagggtca agccgtcggg tttcaccgac ttgtataaat gattggccgc tcggcggccg
     1141 ccggcgccgg gcatgtattg gacgacgatg ttgggatggc cgggaatatg tttcttcagc
     1201 ggtgcgagga tcgctcgcgt gcgcagatca ccggcgccgc cggcgtcggt gccgctgacc
     1261 aaaagtacgt ttttaccttc gtaaaacggc gcttgagctt gcgcgccggc ggcgacgcag
     1321 gcaaccaata gacaacaggt cagctgtgca agtttcatca tggggttaac cattggctgt
     1381 gagttcccac caatttttgt cgagatcgct gaagataaaa ttgactgtgc cggcggcgcg
     1441 gtttatctcg gtgatttcgt ttaggcccag cgacttctta ttcgacacaa actcgcgctg
     1501 cgcctgttcg acttccgccg ccgtgccgag ttgcaaggtg aaacgattga ccggcgccaa
     1561 gtattgacgc gggctgcgtt gcaggacgac gagataccac ggcgtcgctg gatgtttgat
     1621 gtattgggcg gtattgaaac cggcggcgat ttccagcccg agcacttcga cgtaaaaacg
     1681 ccggctgcgc tcgacgtcgt cgcactgcag cgtgccgtgg gtaaaagcct gcggcacgta
     1741 gccgcggcca gggaatcgct cgctgttcaa agtgttgtcc caatggcccg ccgtatgcga
     1801 gcgcccgtgc agcgcgccgc cgggattgta atattcgatc tccaaatgat tgccgccggg
     1861 ctcgtggaaa taaatcgagt aggcgaagtg ggcgctctgc ggtttggtaa tcttgctgat
     1921 gcgatactgg tctttgtgcg cttcgacata ttcccatgcg gcttcgacct cagtgtgcgt
     1981 ggcgacgcga aagccgtagt ggttgtcgaa ggttttctcc ggcgcgccgg ggccgccttc
     2041 gtggacgatc aggcgccaat cggtgttggg atgtttgatc gtcgcttgac ccgctttgcg
     2101 ctcgacgatc tccatggcca gcaggtcggt gaacactggc agggtttcat ccagcgaacg
     2161 acattcatag tgaccctcga tcaagccgat ggttttgagc atggatttct cctctgtgga
     2221 tgagctgcca gattcaatta acgtttgcag cggtgcgctg tcaaatggtg atgaggtggc
     2281 gcctaggccg cgttaacgct tgagcccttc gggatagagc gctttcagga aatcttcctt
     2341 gtccagttcg tggatcagcg aattgtcgat caggttatcg aggttcaact taggattctt
     2401 gccttcgggg atgctgtcca acgcttgctg aatgccttcg cgtctgacgg tcggtacgct
     2461 ctcccacgcc tcgcggtaga agtcataggt cttggccaat acttcgcggt cgttggtctt
     2521 gatgtagcgg cccaaggttt cgatggaaaa ttccttatcg gtcttaaaaa tcttgatgcc
     2581 ttcgatataa actcttaaaa atcgtttgac aacggcgcgc tgagcgcgaa gaaactcgcg
     2641 gctgacgacg atgccttggg tcgaatagtt gagcggcagc ttgcgcatgt cgatgagcac
     2701 gtgaaagcct agcttctccg cttggtacaa ttggtcgacg tttaacaccg cgccgtcgac
     2761 gatgccggag gtgagcgcca ccatgcgttc gcccaggccg cccatctgga cgatggaaat
     2821 atcctgagtt ttgagtttgt ggtaggccag cgcgtcgcgc agggaagtgt ctgagagcga
     2881 gccaaaacgg cttatcgcca cgcgtttgcc tttgagttcg tcggctcttt ttattttcgg
     2941 attgaccatc agcacgttca gcacccgctc gatgccgccg gcgacgatgg cgagctcggc
     3001 gcctttggcc caggcgctta ccgccgacgg cggcgcgagg ctggcgacgc cgacatctcc
     3061 ggacagcaag gtctgcacga tcagcgaacc gcccggcatg tagatcaact gggcgtcgag
     3121 ctgatttttc ttgaatagtc cggcgcgttc gccgagatag agcggcgctt gaaagccgga
     3181 gatcgagacg taggggactt tgatggtctg ggcgggggct gggccggcgc acaacagcgc
     3241 ggcgatgagc gagaatggcg cgcagtagaa aagtttgccc ataatgtaag ctccttaccg
     3301 gcccgggcgt cttggcttgt ggcagttcgc ggtcgagcca cctccgctgc gccgcggaat
     3361 gaccactgaa gcagatttag ttcttgtata gatttttgac gaagccttct ttctccaact
     3421 catccaatat cgtgaagtcg acaaaccggc gaggatcggc gcctttggcg ccgggaagtt
     3481 tctccatgcc ttcgagaatg gtcctgacgc cgtcgagcga agtgcgcggc atgcgcagca
     3541 tgtgttgcgc ctggatagcg taggcttcct tcacttcgtc gcggtttttc gcgcgagtcc
     3601 atttctgaat tatcttgacg ctgaactctt cgttttcgag ataggtcctt cgaggaagcc
     3661 gcgcatgaat cgcttcgcgg tgtcgcgctg gccgtcgatg aagcgttggc gcgtgactat
     3721 cgtgccggtg atgtagggtt tgctgatctt ggtcatgtcg aatagttcga cgaagccgag
     3781 attcttcgcg cggatgttgc tcggaatcga gatcggcgcg gcgtcgatga cgccgttcac
     3841 taacccttgg accaaaagtc ccatctcgtt caattgaatc atttgcacat cggtggccgg
     3901 atcgaggttc cacattttca gcatcgaccg ggccagggca tcgggggtgg cgccaaagcg
     3961 ggtgacgccg acgcgtttgc ctttcaaatc ctgcggcgtt ttgattttgc cgttgacgat
     4021 gaagctgtag agcggcttgt cgaggatggc gcccaggaaa agcgtgtcgg cgccgctcag
     4081 gttggcactg acgcaagcat cggtgaccga ttgcgcgacg gccacttcgc cggcgagcag
     4141 cgcttgtaac gccgtgatgc tgctggcgtg gatgacttcg acatcgaggc catgttttct
     4201 aaaatggccg gcttcgacgg cgatccaggg aatcgcttgg ttgaccgaga tcgcgctgta
     4261 ggcaaggcgc agcggcgtga gcttcgcggt ctcggcggcg ccggctaagc gcggcgccag
     4321 aataaatgcg ccggcgatga gtgcaataag tacctgacgc aattcgacca gcttgttcat
     4381 gtcaaccttt ctctcgcgat gcccggtggt actacgggcg ggtttcaaac cacgccccta
     4441 catttcagaa ttcatttttt ttgtttccta tgcgttcatt gcggccactt tt
//
LOCUS       DATIRS010001043         4984 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_177061, whole genome shotgun sequence.
ACCESSION   DATIRS010001043 DATIRS010000000
VERSION     DATIRS010001043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4984)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4984)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4984
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177061"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            198..2660
                     /locus_tag="VLM90_13255"
     CDS             198..2660
                     /locus_tag="VLM90_13255"
                     /inference="COORDINATES: protein motif:HMM:NF012676.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase"
                     /protein_id="HSQ13988.1"
                     /translation="MADKIIRLDSRRDVEAIAWAKELRETDGWFHSSRFRHITRLHSA
                     AEVVSLRGNLQADHTIAKQSALKLFDYLQRLFRDKKQETTYGPYSPTGAVRAVMEGIK
                     VLYLGGWATSAKGSESEDPGADLANYALDRVPKEGGAWVRALMHQDEVQRSRRIRMSS
                     LQRKKTRPIEFSPPLIIPDGDTGHGGEHHTRNLVKTFVENNIGAIHIEDQRAGSKVCG
                     HQGQKVLVSTSEMISRLNAARLQYDIMHVPGVIVARTDSNDATAIDSVDDDRDHPFVY
                     GATNPDIVPFKNVSLAVIRKFYQKGFKDINGHLLYQISEQAYADADKWLKQEHLVERI
                     TEGIVRIDNEVAALKKLRQRVRRPGKGQHDFREQLAALELTVKKVIEETVDEVIANIR
                     QEWAEKARLKTFAEAVAEVLEGGGKSKGRQAMSVDRWKKFAGAVSNGEARARAASMGI
                     DVFWDWDLPRTPEGFYVIAGGRDMATARGLATAPFADLIWRETAKPDLADDKAWADAI
                     HAAYPESLLAYNLSPSWNWDVWGFTDDQIRNFANELGKMGYVFNFITYGGHQTEALMN
                     GRLARALKEEGVLGFVRLIQRALRLAHDPAQFPQSFVGGDWADRFRRAARGASLTSSS
                     MGGKSTETQHRKAVEVPTSVLEKWLGMWAEHWHRQGLYQGGALSVELKERWAGSEDMM
                     LNLFDEAHDKIAEIIFRVDKDRAGRKFLAVKDQNTIKKFRSRRLMTLMHFFLLHRYKT
                     ELVHYVTPTSDNRLSVQRMIQNGVFRASRTDDPHIIAMEVDSARGLKIFANEDSIRKF
                     IARQFKPVERPIVNRRTAGRGA"
     gene            2699..4885
                     /locus_tag="VLM90_13260"
     CDS             2699..4885
                     /locus_tag="VLM90_13260"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: protein motif:HMM:NF002825.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004474 - malate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006097 - glyoxylate cycle [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate synthase G"
                     /protein_id="HSQ13989.1"
                     /translation="MADYIETSGLRVDEQLYLLVRDEIAPGTGIDADSFWASFGKIIA
                     DLAPTNRALLDRRDALQSQIDHWSLAQRSKPFDVGGYKSFLTDIGYLDAEGEDFQAGS
                     ANVDREIAAISGPQLVVPLDNARYALNAANARWGSHYDALYGTDVIPEDNGAEKGEVY
                     NPRRGAKVIAYAEAFLDEAVGLAGGKFSQVAEFSLKDAGGAKQLTARLQDGREVGLAD
                     VAKFAGYRETAGQLSHLFFKNNGLHIELRIDRNHPIGKSHAAGVKDVVLESAVTTIQD
                     CEDSVAAVDAADKVRVYRNWTGIMKGTLTARVDKGGKELLRSLNPDVCFTAADGETET
                     LPGRSLLLVRNVGMHMYTDAVTTADGAEIPEGFLDAMVTALAALHDLLRTGKFINSRT
                     GSVYIVKPKQHSGDEVAATVGLFARVEQALGLTPNTLKLGIMDEERRLTVNLKQAIRA
                     ARERVVFINTGFLDRTGDEIHTSMELGPMLPKMAIKNQPWLGAYEDWNVDVGIATGLP
                     GKAQIGKGMWTMPDEMRKMMDTKQAHPEAGANTAWVPSPTAATLHALHYHKVDVRKQQ
                     SALAQRSRASLDAILTPPLLDRKLSAEEIQNELDNNAQGILGYVVRWVDQGIGCSKVP
                     DIHDTALMEDRATLRISSQHIANWLHHNVLSREQVIDTFKRMAAIVDRQNSGDANYRN
                     MAPAFDLSIAFNAALDLVFKGRETANGYTEPVLHACRRRVKSAGRG"
BASE COUNT         1098 a         1442 c         1503 g          941 t
ORIGIN      
        1 ccctccgaaa ttggcgggtt ttgcgccttg gcgggaggaa tatcggtgtc cgagaatatt
       61 tgaattgcgc gaggggctcg gcgcaggatc tgcgatcgct tgataagacg attactttat
      121 tattagctta gccaaccgtc aggaaagttg cattgaggaa aaaagttgat ttagcccaac
      181 cataaaagga ttgcgacatg gctgacaaaa tcattcggtt ggattcccgc cgggacgtcg
      241 aggcgatcgc atgggcgaag gagctgcgcg aaaccgatgg ctggtttcat agctcgcgct
      301 tccgccatat tacccgtctg cattcggcag ccgaggtcgt ctccttgcgc ggcaatttgc
      361 aggccgatca tacgattgcc aaacaatcgg cgctaaagct cttcgattac ttgcagcgct
      421 tgttccggga caagaaacaa gagaccacct atggcccgta ttcgcccacc ggcgcggtgc
      481 gcgcggtcat ggaaggcatc aaggtgcttt atctcggcgg ctgggcgacg tcagccaagg
      541 gctccgaatc cgaagacccg ggcgccgact tggccaacta tgctttggat cgggtgccca
      601 aagagggtgg cgcctgggtg cgcgcgctca tgcaccagga cgaagtgcaa cgttcgcggc
      661 gtatccgcat gtcttcgctg cagcgcaaaa agactcgccc catcgagttc agcccgccgc
      721 tgattattcc cgatggcgac accggccacg gtggcgagca ccatacgcgc aacctggtta
      781 agaccttcgt cgaaaacaac atcggcgcga tccatattga ggaccagcgc gccggcagca
      841 aggtttgcgg tcaccagggg cagaaagttt tggtgtcaac ctcagagatg atttcgcgtc
      901 tcaatgccgc gcggctgcaa tatgacatca tgcacgtgcc gggcgtgatc gtcgcccgca
      961 ccgactccaa cgacgctacg gccatcgaca gcgtcgacga tgaccgcgac catccgtttg
     1021 tctacggcgc gaccaatccg gatatcgttc cgttcaagaa tgtcagcctg gcggtgattc
     1081 gcaagtttta ccagaaaggc ttcaaggaca ttaacggcca tctgctctac cagatttccg
     1141 agcaagccta cgccgacgcg gataaatggc tcaagcagga gcatctcgtc gagcgcatta
     1201 ccgagggcat cgtgcgcatc gacaacgaag tcgctgcgct gaaaaaattg cgccagcggg
     1261 tgcggcgccc gggcaaaggc cagcacgact ttcgcgagca gctggccgcg ctggaactca
     1321 ccgttaaaaa ggtcattgaa gaaaccgtcg acgaggtcat tgccaatatc cgccaagagt
     1381 gggcggaaaa agcccggctc aagacctttg ccgaagcggt ggcggaagtg ctcgagggcg
     1441 gcggcaagag caaaggcagg caggcgatgt ccgtcgaccg ctggaagaaa tttgccggcg
     1501 ccgtgtccaa tggcgaggcg cgcgcccgcg cggcgtcgat gggtatcgat gtcttctggg
     1561 attgggacct gccaagaacc ccggagggct tttacgtcat tgccggcggc cgcgacatgg
     1621 ctacagccag aggtttggcc actgcaccgt ttgccgatct gatctggcgc gaaacggcca
     1681 agcccgacct ggcggatgac aaagcctggg ccgatgccat tcacgcggcc tacccggaaa
     1741 gcttgttggc ttataactta tcgccgtcct ggaattggga tgtctgggga tttaccgacg
     1801 atcaaattcg taattttgcc aacgaactgg ggaaaatggg ttacgtcttc aacttcatca
     1861 cctatggcgg ccaccagacc gaggcgttga tgaacggccg cctggcgcga gccttaaaag
     1921 aagaaggcgt gctcggcttt gtccgattga tacagcgcgc cctgcgcctg gcccatgatc
     1981 cggcgcaatt tccgcaaagc tttgtcggcg gcgactgggc cgaccgtttc cggcgcgccg
     2041 cgcgcggcgc atcactcacg agctcctcca tgggtggaaa atcgacggaa acccagcatc
     2101 gcaaagccgt cgaggttccc accagcgtgc tagagaaatg gctgggcatg tgggccgagc
     2161 actggcaccg ccagggtctt tatcagggcg gcgccttgag cgtcgaattg aaagagcgct
     2221 gggccggctc cgaagatatg atgctcaacc tgttcgacga ggcgcacgac aaaatcgccg
     2281 agatcatttt tcgcgtcgac aaggatcgcg caggacggaa gtttctcgcg gtcaaggacc
     2341 agaataccat taaaaaattt cgctcgcggc gactgatgac gttgatgcat tttttcctcc
     2401 tgcatcgcta caaaaccgaa ttggtgcatt acgtgacgcc gaccagtgac aatcgcttgt
     2461 cggtgcagcg gatgatccaa aacggcgtgt ttcgcgcctc gcgcaccgac gacccgcata
     2521 tcatcgccat ggaagtggac agcgcgcgcg gcctgaagat cttcgccaat gaagactcga
     2581 tcagaaagtt tatcgcgcgt cagttcaaac cggtggagcg gccgatcgtc aaccggcgca
     2641 cggcgggccg cggcgcttga cagcggtggc aacgactggc gaaggaaagc ataggccaat
     2701 ggcagactat attgagacct ccgggttacg cgtcgacgag cagctttatc ttctggtgcg
     2761 cgacgagatc gcgcccggca cgggcatcga cgccgactct ttctgggctt cgtttggcaa
     2821 gatcatcgct gatttggcac cgaccaatcg cgcgctgttg gatcgacgcg atgcgctgca
     2881 aagccagatc gatcattggt ctctagcgca gcgctccaaa ccgttcgacg tgggtggata
     2941 taagtccttt ctcaccgaca tcggctatct cgatgccgag ggcgaagatt tccaagcggg
     3001 cagcgccaac gtcgaccgcg aaatcgcggc gatctccggc ccgcagctgg tggttccgct
     3061 ggataacgca cgctatgcgc tcaacgccgc caacgcgcgc tggggcagtc actacgacgc
     3121 gctctatggc acggatgtga tccccgaaga caatggcgcg gaaaaaggcg aagtctataa
     3181 cccgcggcgc ggcgccaaag tcatcgccta cgctgaagcc ttcttggatg aagccgttgg
     3241 ccttgccggc ggcaagtttt ctcaggttgc cgagttctcc ctgaaggacg ccggcggcgc
     3301 caaacaactg acggcaaggt tgcaagacgg gcgcgaagta gggttggcgg acgtcgccaa
     3361 gtttgccggc tacagggaaa cggcgggaca gttatcccat ctctttttca aaaataacgg
     3421 tttgcatatc gagctccgca tcgatcgcaa tcatcccatc ggcaagagcc atgcagcggg
     3481 agtgaaagat gtcgtcctcg agtcggcggt tacgacgatc caggactgcg aagattcggt
     3541 ggcggcggtg gacgcggccg acaaagtccg cgtgtatcgt aactggaccg gcatcatgaa
     3601 agggactttg accgcgcggg ttgataaagg cgggaaggag ttgctgcgca gcctgaatcc
     3661 cgacgtttgc ttcactgctg ccgatggcga gactgaaacg ctgcccggac gcagcctgtt
     3721 gctggtgcgc aacgtcggca tgcacatgta cacggatgcg gtaaccacgg cggacggcgc
     3781 ggaaattccc gagggatttc tcgacgccat ggtgaccgcg ctggccgcct tgcacgattt
     3841 gctgcgcacc ggaaagttta tcaatagtcg aaccggcagc gtttatatcg tcaaacccaa
     3901 gcagcatagc ggcgacgaag tggcggcgac ggtggggttg ttcgcgagag tcgagcaggc
     3961 gctcgggctg acaccgaaca cgctcaagct tggcatcatg gacgaagagc ggcgtctgac
     4021 cgtcaatctc aagcaagcga tccgcgcggc gcgcgagcgg gtggtgttta tcaacaccgg
     4081 atttctcgac cgcaccggcg acgaaatcca tacgagcatg gagctcggcc cgatgttgcc
     4141 gaaaatggcc atcaagaatc aaccgtggct cggcgcttac gaagattgga atgtcgatgt
     4201 cggtattgcc acgggtcttc caggcaaggc acagatcggc aaaggcatgt ggaccatgcc
     4261 ggacgagatg cgcaagatga tggacaccaa gcaagcccac ccggaggctg gcgcgaatac
     4321 ggcatgggtg ccctcgccga cagccgcaac gttacacgcg ctgcactacc acaaagtcga
     4381 cgtccgcaag caacaatcgg cactggcaca gcgcagccgc gccagcctgg acgccatcct
     4441 gacgccgcct ctgctcgatc gcaagctcag cgcggaggaa attcaaaacg agctggataa
     4501 caatgcccaa gggatacttg gctacgtggt gcgctgggtg gatcaaggta tcggttgttc
     4561 gaaggtgccg gatattcacg acaccgcgct gatggaagac cgcgccacac tgcgcatctc
     4621 cagccagcac atcgccaact ggctgcatca caacgtcctt agccgggaac aggtcatcga
     4681 cactttcaag cgcatggccg ccatcgtcga ccggcaaaat agcggcgatg cgaattatcg
     4741 caacatggcg ccggcatttg acctaagcat tgcttttaac gctgccttgg atctcgtttt
     4801 caagggtcgg gaaacggcca acgggtatac cgagcccgtg ctccatgctt gccgccggcg
     4861 ggtcaagtcg gccggccgcg gctgagcgcc atccaacccg taggatcctc ccgtccacgc
     4921 tggcagtcat cgctgctctt cgtccactta gaatccgtcg tagaactttt gccttcgaga
     4981 aact
//
LOCUS       DATIRS010001044         2199 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1555289, whole genome shotgun sequence.
ACCESSION   DATIRS010001044 DATIRS010000000
VERSION     DATIRS010001044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2199
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1555289"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..747
                     /locus_tag="VLM90_13265"
     CDS             <1..747
                     /locus_tag="VLM90_13265"
                     /inference="COORDINATES: protein motif:HMM:NF019998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ13990.1"
                     /translation="VGLSGFEDRPGPLLSGGQQQRVAFARALVTEPRVLLLDEPFSNL
                     DAKLREQMRIGVKLLQKRLNIAMLFVTHDQIEALSLSNRIALMNFGVVQQQGDPHLLY
                     EKPANEFVRDFVGRTLLFKGKVQSGNSSGQLAIALEGAPDCVVFGRTYNPAGIKTGAA
                     VFIGVRPEDVEILPATGATPPPGMIGGVAPAALFIGERIEYQVEVAGQGEVLVYGERH
                     QPIDEGNKVWLKLRPDGHSAWSSDWSLKEE"
     gene            761..1972
                     /locus_tag="VLM90_13270"
     CDS             761..1972
                     /locus_tag="VLM90_13270"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ13991.1"
                     /translation="MKTLLQPAKANLRPRRRSDRSIRSVGSVGSLLLLFATATAAFGA
                     AAPANFEQEWSKLIAAAKQEGNVLIASGGAPLRQYRPVMDAFSKKFGIKVEVSTGNAT
                     DTVNRVLAERKAGKFTVDVALISSRENNQRLVPSDSLVPFAPLLIHPEVLDKSAWYMG
                     HHWYADKLSKFTFIYHVTKEDQYETWYNTDKIKDTEVATIKKQTDYFDARWKGKIAGQ
                     GMGDPSGIRQMIDSYFEPDRGQEWIRTYLLNAGVTFSDDRRILETWLVGGRFPLYAVS
                     TGSEELAILAKKGLPIKQVLLPKQAALIRAGGSGCCISAFANPQHPNAAKLFINWFLS
                     KEGQTLTHTMIPAIDRSSLRNDIPIGEVVVDQRRAPGKEYGFPDADPTMGAKQEEAQK
                     WVYKIWETRQK"
BASE COUNT          515 a          665 c          601 g          418 t
ORIGIN      
        1 gtcggcttga gcggttttga agatcggccg gggccgctcc tgagcggcgg ccagcaacag
       61 cgcgtcgcct tcgcccgtgc cctggtcact gaaccgcgcg tcctgctgct cgacgagccg
      121 ttcagcaacc tcgacgcgaa attgcgcgag cagatgcgca tcggcgtcaa actcctgcaa
      181 aaaagattga atatcgccat gctgttcgtc acgcacgatc aaatcgaagc gctgagttta
      241 tccaatcgca tcgcgctgat gaatttcggc gtggtccagc agcaaggcga tccccattta
      301 ctctatgaaa agccggccaa tgaattcgtc cgcgacttcg tcggccgaac tttgctcttc
      361 aaaggcaagg tacaaagcgg caattcgtcg ggacaattgg ctatcgctct cgaaggcgcg
      421 ccggattgtg tggtctttgg ccggacctat aatcccgctg gcatcaaaac cggcgccgcc
      481 gtttttatcg gggtgcgccc ggaagatgtt gagatactac cggcaaccgg ggcaaccccg
      541 ccacccggga tgatcggcgg cgtcgcccca gccgcgctgt ttatcggcga gcggatcgaa
      601 tatcaggtcg aagtcgcagg ccagggcgaa gtgttagttt acggcgaacg ccatcaaccc
      661 atcgatgaag gcaataaagt ctggctcaaa ctgcgccccg acggccacag cgcgtggtca
      721 tcggactggt cgcttaaaga agagtgaagg aaaggatgtt atgaaaactc tactacagcc
      781 cgccaaagcg aacttgcgcc ccagaaggcg atccgaccga tcgatccggt ccgtcggatc
      841 ggtcggatcg ctactgctcc tgtttgccac cgccaccgcc gccttcggcg ccgcggcgcc
      901 ggcaaacttc gagcaggaat ggtccaaact cattgccgcg gcgaagcaag aaggcaatgt
      961 cctgatcgcc tccggcggcg cgccgttgcg ccagtaccgt ccggtaatgg acgcgttctc
     1021 gaagaaattc ggcattaaag tcgaagtttc cactggcaac gccaccgaca cggtcaatcg
     1081 cgtcttagcc gaacgtaaag ccggcaagtt caccgtcgat gtcgccttga tcagttctcg
     1141 tgagaacaac cagcggttgg tgccctccga ctccttagtc ccgttcgcgc ccttgctgat
     1201 ccatcccgaa gtcctcgaca agtcggcctg gtacatgggt caccactggt acgccgacaa
     1261 gctttctaag ttcaccttca tttaccatgt caccaaggaa gaccagtacg agacttggta
     1321 caacaccgac aagatcaaag acacggaagt cgccaccatc aaaaaacaaa ccgactactt
     1381 cgatgcgcgc tggaaaggca aaatcgccgg ccagggcatg ggcgatccat ccggtatccg
     1441 gcaaatgatc gacagctatt tcgaaccgga ccgcggccag gaatggatca ggacttacct
     1501 gctcaacgcc ggcgtgactt tcagcgatga ccggcgaatt ctcgagacct ggctggtcgg
     1561 cggcagattt ccgctctacg cggtttccac cggcagcgaa gagctcgcca tcttggcgaa
     1621 gaaagggctg ccgatcaaac aagtcctgtt acccaagcaa gcggcgctga tccgagcggg
     1681 cggctccggc tgttgcatct cggcctttgc caacccgcag catcccaatg ccgccaagct
     1741 gttcatcaac tggttcctgt ccaaagaagg ccaaacgcta acccacacga tgatccctgc
     1801 catcgaccga tcgtcgctgc gcaacgatat cccgattggt gaagtcgtgg tcgatcagcg
     1861 ccgcgcacct gggaaagagt acggcttccc cgacgccgac ccgaccatgg gcgcgaagca
     1921 ggaagaagcg cagaagtggg tttataaaat ctgggagaca aggcagaaat aacaaagaaa
     1981 aatttcgaag tttccaatcg tttcaaaggt tccagttgtt aacgacagca atcgatcgtg
     2041 acgacgggaa cgattggaac cactggaacg gctggaacta taatcgcccg tggaacgatc
     2101 tccaacacta gatcagctta gtatcgcgcc aacaattccc gccccccgct taacccgcgg
     2161 ccatttcatc atggcggcgg tgttgatcgg actcggcta
//
LOCUS       DATIRS010001045         1713 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1456895, whole genome shotgun sequence.
ACCESSION   DATIRS010001045 DATIRS010000000
VERSION     DATIRS010001045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1713
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1456895"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            59..1081
                     /locus_tag="VLM90_13275"
     CDS             59..1081
                     /locus_tag="VLM90_13275"
                     /inference="COORDINATES: protein motif:HMM:NF013253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy-acid oxidizing protein"
                     /protein_id="HSQ13992.1"
                     /translation="MTDKPLEQMGLRDLRGIMRQKAPAEAWKHFNGAAETKATFYRNP
                     RAFQQYLFRQKIFHDVSEPDISVELFGKTLPIPAITAPVGSFSLIGEEAEREVAEGTD
                     RAGAMMFVSQAAHFNLHDWRNVDKSPLVFMAYMNRGKPEVEEYAKTAEDLGFAAVGIT
                     MDTVKPVKIGDEVPLSTKDGKPRKGHKSTPKDIEWMKQIVKLPVVVKGIMGGADARVA
                     VNSGADALVVSNHGGRILDFNRSALEALPEVVDAVGGKVPVLLDSGVRSGGDIVKAMA
                     LGAKAVLTGRPIAWGVGAFGASGVERVFHIFAEEMQRVLVMTGFARARDVTRDILIRD
                     EWGKAR"
     gene            1084..1641
                     /locus_tag="VLM90_13280"
     CDS             1084..1641
                     /locus_tag="VLM90_13280"
                     /inference="COORDINATES: protein motif:HMM:NF015944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HSQ13993.1"
                     /translation="MIFVIWGIVFVAGIWIISTYNNLTGLRLRVQNAWHQINVQLKRR
                     YDLIPNLVETVKGYMQFEQDTLQKVIDARSKAMVSTGVKQAAEAQGALNESLGKVFAL
                     MENYPDLKSNKNVLDLQEELATTENQIAFARQYYNDLVTQYNTKQQVFPGNLIAGFFK
                     FQPSEFFSAPEAEMALPKVNLSLPR"
BASE COUNT          387 a          487 c          516 g          323 t
ORIGIN      
        1 cgcagacaaa tggccgcaag cagtttataa ttcacctaaa cgacaaggcg aggaatccat
       61 gactgacaaa ccactggaac agatggggct gcgcgatctg cgcgggatca tgcggcaaaa
      121 ggcgccggca gaggcctgga aacattttaa cggcgcggcc gagaccaagg cgacatttta
      181 ccgcaatccg cgggcattcc agcaatactt attccgccaa aagatcttcc acgacgtttc
      241 cgaaccggat atttccgtcg agctgttcgg caaaaccctg ccgatcccgg cgatcaccgc
      301 gccggtgggg agcttcagct tgataggtga agaagccgag cgcgaggtcg ccgagggcac
      361 cgatcgtgcc ggcgccatga tgtttgtcag ccaggcggcc catttcaacc tgcatgattg
      421 gcgcaatgtc gataaatcac cgctggtgtt catggcctac atgaatcgtg gcaagccgga
      481 agtggaagag tatgctaaga ccgccgaaga cctgggtttc gccgccgtgg gcatcaccat
      541 ggatacggtg aagccggtga agatcggcga cgaggtgccg ctgtcgacca aggacggcaa
      601 gccccgcaaa ggccacaagt cgacgcccaa agacatcgag tggatgaagc agatcgtcaa
      661 gctgccggta gtcgtcaaag gcatcatggg cggcgccgac gcgcgtgtgg cggtgaattc
      721 cggcgccgat gcgctggtgg tttccaatca cggcgggcgc attctcgact tcaaccgctc
      781 ggcgttggaa gctttgcccg aagtcgtcga cgccgtcggc ggtaaagttc ccgtgctcct
      841 cgacagcggc gttcgcagcg gcggcgatat cgtcaaagcg atggcactgg gggcgaaagc
      901 ggtgctgacg ggccggccga tagcgtgggg cgtcggcgca ttcggcgcca gcggggtcga
      961 acgggtattc catatatttg ccgaggagat gcagcgcgtc ctggtaatga ccggcttcgc
     1021 tcgggcgcgc gatgtgaccc gggacattct cattcgcgac gagtggggaa aggcgcgcta
     1081 atcatgatct ttgtcatctg gggcatcgtt tttgtcgccg gcatctggat catctcgacc
     1141 tacaataact tgaccggcct gcgcttgcgg gtgcaaaacg cctggcatca gatcaacgtc
     1201 cagctcaagc ggcgttacga tttgattccc aatttagtcg aaacggtcaa gggctacatg
     1261 cagttcgaac aggacaccct gcagaaggtc atcgatgcgc gcagcaaggc gatggtttct
     1321 acgggggtca agcaagccgc cgaggcgcaa ggcgcgttga acgaatccct cggcaaagtc
     1381 ttcgcgctga tggaaaacta tcccgacctg aagtccaaca agaacgttct cgacttgcag
     1441 gaagagttgg cgaccacgga aaaccagatt gcctttgcgc gccagtacta caacgatctg
     1501 gtgacccaat ataacaccaa gcagcaggtg ttcccgggca atctgatcgc cggtttcttc
     1561 aaattccaac ccagcgagtt tttctcggcg cccgaagcgg agatggcgct gccgaaagtc
     1621 aacttatcgc tgcctcgata ggcatgaccc tccataccgt tgatcgattt cgcgcaacgc
     1681 caaatccata accagcgctg cagcgccgcg ctg
//
LOCUS       DATIRS010001046         2183 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_473722, whole genome shotgun sequence.
ACCESSION   DATIRS010001046 DATIRS010000000
VERSION     DATIRS010001046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2183
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_473722"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(342..1346)
                     /locus_tag="VLM90_13285"
     CDS             complement(342..1346)
                     /locus_tag="VLM90_13285"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ13994.1"
                     /translation="MIIDSHTHFTTAPPQLQAYRGQQISNLAKPIRAKLQISDEELAR
                     SMAGQFKRMEECGIDRLLFSPQAGAMGHHFGSPLVSRYWTEACNDLIARVAKTWPDKV
                     SPVCQLPQSPGVSPKEWADELDRCVNDLGFISCNVNPDVAGGKEPLTPSMGSEWWYPL
                     WEKMVALDVPCTVHASASLNPAMHLTNSYYIAHHHSAAVEILKSRVFKDFPKLKIIIP
                     HGGGAIPYQWNRQRGLHVREGLEPFEEAARRVYWDMAIYDKESMELLIKRVGADRVLF
                     ATEMFGAVNAIDPETGRNFEDLVPIFKSVEGLSEQDRYNITEGNARTVFSRLFAGSKT
                     "
     gene            1622..>2183
                     /locus_tag="VLM90_13290"
     CDS             1622..>2183
                     /locus_tag="VLM90_13290"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HSQ13995.1"
                     /translation="MSEIPRLNGVIKALEQGKTAFVAFTPVDIENAVAMAGTKLDGVA
                     FEMEHAPLDFPGLRNALQFMLDRGQIVAGGTLAPAVTPMVRVPPNGIEMNSWIAKQVL
                     DIGVMGIIFPHVSSVEEAANAVGACRYPRLKSAPRYHPPGIRGDAPARAARYWGLPQQ
                     EYYKRADVWPLAPDGEVLVVIQCEEMR"
BASE COUNT          442 a          675 c          617 g          449 t
ORIGIN      
        1 ttgtagattt gccctaatcc gggcagaagc atcgataaca gtagtgcgag taatgacttt
       61 gctcgcgggg tcatgaccaa gtactcgatc cggaactggc gtgtcgaacc tttgcgctgg
      121 ttcaggggta tctcacctca ctaacaagcc actgaaaatc ccctcggagt ccttcgacat
      181 gctcaggacg aacggaaagc tgtgccctcg acaagctcgg gactcaaggc ccagtcgagg
      241 gaacctgtcg tgagcgacgt cgaacgatcg aagcatgctc cacctttttc cagcagcctc
      301 taagcatcgc cgatgccggc cctgtgaatt gtcgctgtgt cctacgtctt gcttcccgca
      361 aacagccggg aaaacactgt gcgcgcattg ccctcggtaa tattgtaacg atcctgctcg
      421 ctcaatccct cgacggactt gaagatcggc acaagatcct cgaagtttcg accggtctcg
      481 ggatcgatgg cgttgaccgc gccgaacatt tcggtggcga acaggacgcg gtcggcgccg
      541 acccgcttga tcaacagctc catcgactct ttgtcgtaga tcgccatgtc ccaataaact
      601 cggcgcgccg cctcttcgaa cggttccaat ccttcccgga cgtgcaggcc gcgctggcga
      661 ttccactggt acgggatcgc cccgccgcca tgggggatga tgattttcag cttggggaaa
      721 tccttgaaca cccgcgactt gagaatctcc actgcggcgg aatggtgatg ggcgatgtaa
      781 taggaattgg tcagatgcat cgccggattc agcgacgcgc tcgcatgcac cgtgcacggc
      841 acgtcgagcg ccaccatctt ctcccacagc gggtaccacc actcgctgcc catggacggc
      901 gtcagcggtt cttttccgcc ggcgacatcg ggattgacgt tgcagctgat gaaacccaag
      961 tcgttgacgc agcggtccag ttcgtcggcc cattctttgg ggctcacgcc cggcgactgc
     1021 ggcagttggc acaccggcga gaccttgtcg ggccaggtct tggcgacccg cgcgatcaaa
     1081 tcgttgcacg cttcggtcca gtagcggctc accagcggcg agccgaagtg atggcccatg
     1141 gcgccggcct gcggcgaaaa caacagccgg tcgatgccgc attcctccat ccgtttgaac
     1201 tgtcccgcca tggagcgcgc cagttcttcg tcgctgattt gcagcttggc gcgaatcggc
     1261 ttggcaagat tgctgatctg ctggccgcgg tacgcctgca gctgcggcgg cgcggtggtg
     1321 aagtgtgtgt gtgagtcgat gatcatagca aacctccgaa aggttcaaaa cgttcaagtc
     1381 gttcaaccgc tgcgctccgt tcaaaacgtt gcagagcggg acagcgctgt cggatcggat
     1441 ccttcctagt gaacttcaag atacaagact tcaatcgcac ggattgtcag cttcaaaccg
     1501 ctttgctata ccaagctttc acggagagat caaaacttct ctgccaggcc attccggtgt
     1561 tttacgtttt gaacggcttg aaccttttga acgatttgaa cgccttcaag gagttaacat
     1621 tatgtcagag ataccccgcc tcaacggcgt aatcaaagcc ctcgaacaag gcaagaccgc
     1681 cttcgtcgcc ttcacaccgg tagatatcga gaatgccgtc gccatggcgg gcaccaagct
     1741 cgacggcgtc gcatttgaaa tggaacatgc gccgctggat tttcccggcc tgcgcaatgc
     1801 gctgcaattc atgctcgacc gcggccagat cgtcgccggc ggcaccctag ccccagcggt
     1861 cacgccgatg gtgcgcgtgc cgcccaacgg cattgaaatg aacagctgga tcgccaagca
     1921 agtcctcgat atcggcgtca tgggcatcat ctttccccat gtcagctccg tcgaagaagc
     1981 cgccaacgcc gtcggcgcct gccgctatcc gcgtctcaag agcgcgccga gatatcatcc
     2041 gccgggcatt cgcggcgacg cgccggcgcg cgccgcgcgc tactggggat taccgcagca
     2101 ggaatattac aagcgcgccg atgtctggcc gctcgcgccc gacggcgaag tcctggtcgt
     2161 catccagtgc gaagagatgc gcg
//
LOCUS       DATIRS010001047         1531 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1456944, whole genome shotgun sequence.
ACCESSION   DATIRS010001047 DATIRS010000000
VERSION     DATIRS010001047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1531
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1456944"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(221..>1531)
                     /gene="pyk"
                     /locus_tag="VLM90_13295"
     CDS             complement(221..>1531)
                     /gene="pyk"
                     /locus_tag="VLM90_13295"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: protein motif:HMM:NF004978.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HSQ13996.1"
                     /translation="RLNFSHGDYASHRRVIRTIRRLERKLATPVAILQDLPGPKIRIG
                     AMAGDRVRLQTRGRLVLTTRKVLGSELAVPVNFPGLAQAVKKGDPILLGDGEIELEAL
                     QVGKQEVNCRIVVGGILGSHKGIHFPRSSLNIRALTAEDKKDLAFGIANKVDLVALSF
                     VRNSQDILYARREMHKLGASIPLIAKIEKHEALDNLASILQNVDGIMVARGDLGLEIA
                     QQRIPAVQKHMIREANHLGKPVITATQMLRSMVWNPRPTRAEVADIANAILDGTDALM
                     LSEETAAGEYPLEAVRIMAQVAEETEKILEPRQRFSGLPQTIPEAISVSAISLARDLD
                     VKAFLIPTTSGSTARLIARYRPTQPIIAISPDPQTVKMLCLVWGVYPQTARGFKNTDE
                     MVRVLQQKALASGIVKRGDLVAITAGLPLHQSGTTNMITAKVIE"
BASE COUNT          287 a          418 c          479 g          347 t
ORIGIN      
        1 tggactatgg tgcgtccggg ttgtttggca gggaagtgat atcttggagc tgcgaatgaa
       61 acacgactat gcgacttcac ggctaggtgg cttcactgct ccggactcac ccctgccggg
      121 tgaataactg cgtggcagga cactgcgagt taagatggca aaaacaaagg gcggcaatgg
      181 ttcccgtcct ttgtgcagtt tggaaagaaa aaaattgtct ttactcgatc accttggcgg
      241 tgatcatgtt ggtggtgccg gactggtgca gcggcaagcc ggcggtgatg gcgaccaggt
      301 cgccgcgttt gacgatgccg gatgcgagag ctttctgttg cagcacgcgg accatttcat
      361 cggtgttctt aaaaccccgc gccgtttgcg gataaacccc ccagaccagg caaagcattt
      421 tgacggtttg gggatcgggg ctgatggcga tgatcggttg cgtcggccgg tagcgcgcga
      481 tcaagcgcgc cgtgctgccg gaagtcgtcg ggatcagaaa cgctttaacg tctaaatcgc
      541 gtgctaagga aatggcgctg acactgatcg cctccggaat tgtttggggc aagccgctga
      601 aacgttgccg cggttcgaga atcttttcag tttcttcggc cacctgagcc atgattctga
      661 ccgcttccaa tggatactca ccggcggcgg tttcttccga tagcatgagc gcgtcggtgc
      721 cgtcgagaat cgcgttggcg atgtcggcga cttccgcgcg cgtcggccgc ggattccaca
      781 ccatcgagcg cagcatctgg gtcgcggtga tgaccggctt gccgaggtga ttggcttcgc
      841 gaatcatatg tttttgcacc gccggtatgc gctgctgggc gatctccagt cccaagtcgc
      901 cgcgcgccac catgatgccg tcgacgtttt gcaaaatgct ggcgagattg tccaaggctt
      961 cgtgtttttc gatcttggcg attagcggga tactggcgcc gagcttatgc atctcgcggc
     1021 gggcgtagag aatatcctgg ctgttgcgca cgaaggacaa tgccaccagg tcgaccttgt
     1081 tggcgatgcc aaacgccaag tcctttttgt cttcggcggt gagggcgcga atgttgagcg
     1141 agctgcgcgg aaagtgaatg cctttgtgcg aacccaagat gccgccgacg acgatacggc
     1201 agttaacttc ttgtttgccg acttgcagcg cttcgagctc gatctcgccg tcgccgagca
     1261 ggatcggatc gccttttttt accgcttgag ccagtccggg aaaattcacc ggcacggcaa
     1321 gctcactgcc gagcactttt cgggtcgtca ggaccaggcg gccgcgggtt tgtaaacgca
     1381 cgcggtcacc ggccatggcg ccgatgcgga tcttcggccc cggcaggtct tgcaagatcg
     1441 ccaccggcgt cgccagttta cgttcgagcc tacggatcgt ccgaatcacc cggcggtgcg
     1501 aggcatagtc accatggctg aagtttagcc g
//
LOCUS       DATIRS010001048         2340 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_276491, whole genome shotgun sequence.
ACCESSION   DATIRS010001048 DATIRS010000000
VERSION     DATIRS010001048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2340)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2340)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2340
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_276491"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1342)
                     /locus_tag="VLM90_13300"
     CDS             complement(<1..1342)
                     /locus_tag="VLM90_13300"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSQ13997.1"
                     /translation="MKNFVAGAWIDKAKKIEVTNPFDNSVIDAVPKADAGDLERALAF
                     AERGAKVMAKLSSYERWKILRKAADMMAERNEELGQIISQEEGKIIAEGRGEAMRAVE
                     TMMGSAEEAKRLHGETVPLDADPTGGKKLGFTLRVPCGVVAAIAPFNFPLNLVCHKVG
                     PALAAGNTVIIKPASDTPLSAVKLTEILLEAGLPPEGIQCLTGSGGEIGDALVADRRV
                     RKVTFTGSREIGERICRTAGIKKVTMELGSNSPVIVMPDADMEKVATVLAMTGYGNAG
                     QTCISTQRVLAAKTVYGDLLSALKPKVEALTTGNQLDEKSKVGPMVKESEAMRVDEWI
                     KEAVSGGAKLVAGGGRRGAIYLPAVVADVHPDMRVSRDELFGPAVAVTPFETIEEAIT
                     LANDSIYGLAAGIFTDNVEWAMKFAREAEAGNLHVNWGSQWRVDLMPYGGLKDSG"
     gene            complement(1425..>2340)
                     /locus_tag="VLM90_13305"
     CDS             complement(1425..>2340)
                     /locus_tag="VLM90_13305"
                     /inference="COORDINATES: protein motif:HMM:NF014069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HSQ13998.1"
                     /translation="AVDAMFLVAAKTHGVTKTGNSYLTLKLIDRTGDIEARVWERADD
                     IGRGFDKNDFVRVRGQATLYQGKMQLRVQDVMRVDESKIAPEDFLPKSAFDPQAMLEE
                     LQAILRGMKNPHLLALAEACFADEELMRLLRQAPGAKTIHHPYLSGLLEHTLSLMKLI
                     QKVVENYQGVDVDLLLMGGFLHDIGKVYEFTFDRAVDYTDAGQLLGHLVMEVEMVTKK
                     IEAIAAFPTELALLLKHLLVSHHGAYEFGSPKLPQTVEAVILHSLDDLDGKIQAIQNM
                     PEKEPGSKWTAFHRAYGRSFYRIKTEEP"
BASE COUNT          474 a          743 c          591 g          532 t
ORIGIN      
        1 agccggagtc tttcagtccg ccatagggca tcagatcgac gcgccactgc gagccccagt
       61 tgacgtgcag attgcccgcc tccgcttcgc gcgcgaactt catcgcccat tcgacgttgt
      121 cggtaaaaat cccggcggct agtccataaa tactgtcgtt cgccaaggtg atcgcttctt
      181 caatcgtctc gaatggagtc accgccaccg ccgggccgaa caactcgtcg cgcgagacgc
      241 gcatgtcagg atgaacgtct gcgacgaccg ccgggagata aatcgcgccg cgccgcccgc
      301 cgccggcgac caacttcgcg ccgccgctga ccgcttcctt gatccattca tcgacacgca
      361 tggcttcact ctctttcacc atcgggccga ctttactttt ctcgtcgagt tggttgccgg
      421 tggtcaacgc ttcaactttc ggcttcaacg cgctcaagag atcaccgtat actgtttttg
      481 ccgccaatac ccgctgcgtc gagatgcaag tttggccggc gttgccgtaa ccggtcatcg
      541 ctaaaaccgt cgcgactttt tccatgtcgg catccggcat gacgatcacc gggctattgg
      601 aacccaactc catggtaact tttttgatgc ccgccgtgcg gcaaatccgc tcgccgatct
      661 cgcggctgcc ggtaaatgtc accttacgga ctcttcgatc ggcaactagc gcgtcaccaa
      721 tttccccgcc tgaaccggtg aggcattgaa tcccttccgg cggcaagcct gcttcaagca
      781 aaatctcagt caatttgacc gccgacaacg gtgtatcgga agccggtttg ataatgaccg
      841 tgttacccgc cgccagcgcg gggccaactt tatggcagac gaggtttaat ggaaaattga
      901 acggcgcgat cgctgcgacg acgccgcatg gcacgcgcag cgtgaagccg agtttcttgc
      961 caccggtggg atcggcatcc agcggcacgg tctcgccatg cagccgcttg gcctcctccg
     1021 ccgagcccat catggtttcg acggcgcgca tcgcctcgcc gcgcccttcg gcgatgatct
     1081 tgccctcttc ttgggaaatg atttgaccca gctcttcgtt gcgctccgcc atcatgtccg
     1141 ccgctttgcg gagaatcttc cagcgctcgt agctcgacag cttcgccatc accttggcac
     1201 cacgctcggc gaaggccaac gccctttcca aatcccccgc atcggccttc ggcacggcgt
     1261 cgattaccga gttatcgaac ggattggtta cttcgatctt cttcgcctta tcgatccacg
     1321 cgcccgcaac aaaatttttc atgatggcaa acctccggtt tgaatctcat atttcagatt
     1381 acactgcgtt caatttgcat cgtgcatttc gctttctgca aacttcatgg ctcttcagtc
     1441 ttaattcgat aaaaactccg cccgtacgcg cggtgaaacg cggtccactt cgatcccggc
     1501 tctttctccg gcatgttttg gatcgcttga atcttgccgt cgaggtcgtc gagggaatga
     1561 aggatcaccg cttcaacggt ctgcggcagc ttgggcgagc cgaactcata agcgccatga
     1621 tggctcacca gtaaatgctt gagcagcaaa gccagctcag tgggaaatgc cgcaatcgct
     1681 tcgatcttct tggtcaccat ctccacttcc atgaccaaat ggcccaacaa ctgcccggcg
     1741 tcggtgtaat ccactgcccg gtcgaaagta aactcgtaaa ccttgccgat gtcatggaga
     1801 aagccgccca tcagcaacag gtcgacatcg acgccttggt aattctcgac gactttttga
     1861 atcagcttca tcaaggaaag cgtatgctcc aacaaaccgc ttaaataagg atgatgaatc
     1921 gtcttggccc ccggcgcctg gcgcaacaag cgcatcagct cctcgtcggc gaagcaggct
     1981 tccgccaggg cgagcagatg gggatttttc atgccacgga gaatcgcttg cagttcctca
     2041 agcatagcct gaggatcgaa agcgctcttg ggcaaaaaat cctctggcgc gatcttcgac
     2101 tcgtcgacgc gcatgacgtc ttgcacgcgc aactgcatct tgccttgata aagcgtcgcc
     2161 tggccgcgca cgcggacaaa gtcatttttg tcgaagccgc ggccgatatc gtcggcgcgc
     2221 tcccacaccc gcgcttcgat gtcgccagtc cggtcgatga gtttcaacgt tagataactg
     2281 ttgccggtct tagtcacgcc atgagttttc gccgcgacca aaaacatggc atcgaccgct
//
LOCUS       DATIRS010001049         1714 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_276573, whole genome shotgun sequence.
ACCESSION   DATIRS010001049 DATIRS010000000
VERSION     DATIRS010001049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1714
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_276573"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..436
                     /locus_tag="VLM90_13310"
     CDS             <1..436
                     /locus_tag="VLM90_13310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ13999.1"
                     /translation="HKAELALLRFAGVYGYYSVAGGPGVAVQQAVWDAMAGKPVVLNV
                     YETVDFIYVKDLAHGIALAVHTSPLPHNVYNLGSGRLTTVEEVESALTAIFPGINMKR
                     GKLTPARPRMDITRAHTELGYKPEYRLEAGLRDYIAELKKAK"
     gene            583..1632
                     /locus_tag="VLM90_13315"
     CDS             583..1632
                     /locus_tag="VLM90_13315"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ14000.1"
                     /translation="MKRDFPVIDADGHVIEDIKQLREFLPGAYQKEEGKREYVLLPRD
                     GWMRGALTPRKREDPDPTRWMGFLDACGISTTVLYTSAGLSIGLVHEGDWAVVVARAY
                     NDWLHEHFLRVSPRFRGVALLAVQEPAEAAKELERCVRDYGMVGGMLAAVMNPMRGFG
                     LPQFDPIFAAAERLNVPLGVHAGSAAELGLDHFTSFAGVYPLSHPFAQMQQLTSMMIH
                     GVFERFPKLRVAFLESGCGWVPYLMDRLEESYEHRYNRWPYKAKKSPREIMRGGNLYY
                     SCEVGESTLSSVAALMGSSQIIWPSDFPHERPWDEFSGDLDRFIAREDLSQATTRQIL
                     SENPRRLYGLNDGDR"
BASE COUNT          351 a          452 c          546 g          365 t
ORIGIN      
        1 acacaaggcc gagctggcgc tgctgcgttt tgccggcgtc tacggctatt attcggtcgc
       61 cggcggaccc ggtgtggcgg tgcagcaggc ggtgtgggac gccatggcgg gcaagccggt
      121 ggtgctcaat gtctatgaaa ccgtcgattt catttatgtt aaggacttgg cgcacggcat
      181 cgccctggct gtgcacactt cgccgctgcc gcataacgtg tataacctgg gtagtggccg
      241 gctcaccacc gtggaagaag tagaatccgc gctgacggca atctttcctg ggattaacat
      301 gaaacggggc aagctgacgc cggcgcgccc gcgcatggat atcacgcggg cgcacacgga
      361 attgggctac aaaccggagt acaggttgga agcggggttg cgcgattaca tcgccgagtt
      421 gaagaaggcg aagtaggcgt agagttggca aaggataaag attacttacc accacgaaca
      481 tcacgaaaga cacgaaagct ttggaaaaaa gttttccgaa ctttgtgcgt ttcgtgtcct
      541 tcgtggtgca aggaatttgc tttttcagaa ggagaggcaa ccgtgaagcg agattttcca
      601 gtcatcgatg ccgacggcca tgtcatcgag gacatcaagc agctgcggga gtttttgccc
      661 ggtgcgtacc agaaggaaga gggcaagcgc gagtacgtgt tgttgccgcg cgatgggtgg
      721 atgcgcggcg ccctgacgcc gcgcaaacgc gaagatcctg atccaacgcg ttggatggga
      781 tttctcgatg cttgcggcat atcgaccacc gtgctctaca ccagcgccgg tctgagtatc
      841 ggtctggttc atgagggcga ctgggccgtg gtcgtggcgc gggcctacaa cgactggttg
      901 catgagcatt ttctccgcgt cagtccgcgc ttcagaggcg tggcgctatt ggcggtgcag
      961 gagccggccg aggcggcgaa agagcttgag cgctgcgtgc gcgactatgg catggtcggc
     1021 ggcatgctgg cggcggtgat gaatcccatg cgcggttttg gcttgccgca gttcgatccg
     1081 atcttcgcag cagcggagcg cttgaacgtg cccctcggcg tgcacgccgg atctgccgcc
     1141 gagttgggac tcgatcattt caccagcttt gccggcgtct atcctttgag ccatccgttc
     1201 gcccagatgc agcagcttac cagcatgatg atacacggcg tattcgagcg gttccccaag
     1261 ctgcgcgtgg cgtttctcga gtccggctgc ggttgggttc cctatttgat ggaccggctc
     1321 gaagaaagtt acgagcatcg ctacaatcgt tggccctaca aggccaagaa atcgccgcgc
     1381 gaaattatgc gcggcggcaa tctttactat tcctgcgaag tgggcgagtc gacattgagc
     1441 tcggtggcag ccttgatggg cagcagccaa atcatttggc cgtcggattt tcctcatgag
     1501 cggccttggg acgagttctc cggcgacctc gacagattca tcgcccgcga ggatttgtca
     1561 caggcgacga cccggcagat cctgtcggaa aacccgcggc ggttgtatgg tttaaacgac
     1621 ggcgataggt gataggtgcg tagggaacga tacaagattt ttcaccacga aggcacgaag
     1681 agcacgaagt tcggaatact aattttccga accc
//
LOCUS       DATIRS010001050         2640 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1946868, whole genome shotgun sequence.
ACCESSION   DATIRS010001050 DATIRS010000000
VERSION     DATIRS010001050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2640)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2640)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2640
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1946868"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1442
                     /gene="argS"
                     /locus_tag="VLM90_13320"
     CDS             <1..1442
                     /gene="argS"
                     /locus_tag="VLM90_13320"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR00456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HSQ14001.1"
                     /translation="IAGPGFLNFAFTPKFYFAQLREIAAGQQDKINIGQGRRVQVEFA
                     SVNPTGPLHVGHGRVAVIGDVLARLHEATGFSVEREYYVNDAGNQMENLGLSLYARYL
                     EQLGQPAEFPEGGYPGDYVNELAAEVKARDGDKYLRADKASAVAFFRQFGGDSLLNTI
                     RGQLGEFSIRFDSYFSEKAMRERDEVTQSMARLRELGLLYSHDGAEWFRSTQFGDDKD
                     RTVIKSDGELTYFAADIAYHRNKFERKFAKLINVWGADHHGYVPRLKAAMQGLGYDAD
                     ALQVVLVQMVQLTRGGEPVRMGKRTGEFVALEDVLQEVGRDAARFFFLMRKSDSHLDF
                     DLELAKKQSSENPVFYVQYAHARVASIFAQAAKNGVALGAFESVPVERLELAEELELI
                     RQMIQFNDVLEESVRELEPHRMVFYLLEFAGEFHRYYNRNRVVSDDIDLSRARLLLLA
                     NIQKTIRRGLEILGVDAPMKMAARMETEV"
     gene            1474..2160
                     /locus_tag="VLM90_13325"
     CDS             1474..2160
                     /locus_tag="VLM90_13325"
                     /inference="COORDINATES: protein motif:HMM:NF016895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HSQ14002.1"
                     /translation="MAENRRGKDSSYYLSRGQMIILGGTFTLASIVVFLIGMMVGKEL
                     EERKILKKDEPLVRIPVKPAGAAAGTAAKNDEITFYDTLAKSRNAQAQAEQPVKDAKS
                     SEKIDRAEVTEIKAVAKPDTQLAKSTESKADKLEPATDGAKSESIDTEGKVWRAQVDA
                     FPDERSAKLLGDRLKNKGYNAYVNEVEFRGKPWFRVSVGKYGSRGEADKIVGALKDKE
                     NYAKAFAASR"
     gene            2179..>2640
                     /gene="trpD"
                     /locus_tag="VLM90_13330"
     CDS             2179..>2640
                     /gene="trpD"
                     /locus_tag="VLM90_13330"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR01245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HSQ14003.1"
                     /translation="MNIREAIDKLVNRIDLTEIQTVDVMNQIMTGEATPLQVASFLTA
                     LRMKGETVDEITGAARVMREKAHRVNVGAKTVLDTCGTGGDQKGTFNISTTAAFVVAG
                     AGVTVAKHGNRSVSSQSGSADVLGTLGVKVDEPRELVEQCIAQIGIGFLFAP"
BASE COUNT          599 a          697 c          828 g          516 t
ORIGIN      
        1 agatcgctgg accgggattt ttgaacttcg cgttcacgcc gaagttttac tttgcccagc
       61 tgcgcgagat cgccgcgggc cagcaagaca agatcaatat tggccagggg cgcagagtgc
      121 aggtggagtt cgccagcgtc aatccgaccg ggccgctcca tgtcggtcat ggccgggtgg
      181 cggtgatcgg cgatgtcttg gcgcgcttgc acgaagccac cggtttctcc gtcgagcgcg
      241 agtattacgt caacgacgcc ggcaatcaga tggagaacct tggcttgtcg ctctatgcgc
      301 gctaccttga acagttaggc cagccggcgg agtttcccga gggggggtat cccggcgact
      361 atgtcaatga actcgccgcc gaggtgaaag cccgcgacgg cgataaatat ctccgtgcgg
      421 acaaggccag cgcggtggcg ttctttcgac aatttggcgg cgattcatta ttgaacacca
      481 tccgcggcca gctgggcgag tttagcattc gtttcgactc ctacttcagc gagaaggcga
      541 tgcgtgagcg tgacgaagtg acgcagtcga tggcgcgcct gcgcgagctc ggtttgctct
      601 actctcacga cggcgccgag tggtttcgct ccacacaatt cggcgacgat aaagatcgta
      661 cggtgatcaa gagcgacggc gagctgactt attttgccgc cgacatcgcc tatcatcgca
      721 acaaatttga gcgtaagttt gccaaactga tcaacgtttg gggcgccgat catcatggct
      781 atgtgccgcg cttgaaggcg gcgatgcagg gcctggggta cgacgccgat gcgttgcagg
      841 tggtgctggt ccagatggtc cagctcaccc gtggcggcga accggtgcgc atgggtaaac
      901 gcaccggcga attcgttgcc ctcgaagacg tgctccaaga agtcgggcgc gacgcggcgc
      961 ggtttttctt cctcatgcgc aagtcggata gccatctcga cttcgatctg gagttggcga
     1021 agaaacaatc gagcgagaat ccagtattct acgtccagta cgcccacgcg cgggtggcga
     1081 gtattttcgc gcaagctgcc aaaaacggtg ttgccctggg cgcgtttgag tcggtgccgg
     1141 tggagcgttt ggagttggcg gaagagctgg agttgatccg tcagatgatt cagttcaacg
     1201 acgtgttgga ggagtcggtg cgcgaactcg aaccacaccg tatggtattc tatttactag
     1261 agtttgccgg cgagtttcat cgttactaca accgcaaccg cgtggtatcc gacgatatcg
     1321 acttgagccg ggcgcgtttg ctgcttttgg cgaatattca aaagacgatt cgccgggggt
     1381 tggagattct cggtgtcgat gcaccgatga aaatggccgc aaggatggaa accgaagttt
     1441 gaccagtccg cgaagggcga gaggttaatc gaaatggcgg agaaccgcag aggcaaagac
     1501 agcagttact atcttagccg cggccagatg atcatcctgg gcgggacatt taccttggca
     1561 tccatagtcg tatttctcat cggcatgatg gtcggcaaag aactcgaaga gcgaaagatt
     1621 ctcaaaaagg acgagcctct ggtaaggata ccggttaagc cggccggggc agccgctggc
     1681 acggcagcga agaacgatga aattactttc tatgataccc tagccaagtc ccgcaatgcc
     1741 caggcgcagg ccgagcagcc cgtcaaggac gcgaaatcgt cggagaaaat cgaccgcgcc
     1801 gaagtgacgg agatcaaggc tgtcgctaaa ccggacacgc agttggctaa atcgacggaa
     1861 agtaaagctg acaaactcga accggcgact gacggcgcca agagcgagag catcgatact
     1921 gagggtaaag tgtggcgcgc gcaagtcgac gcatttcccg acgagcggtc ggccaaactg
     1981 ttgggtgatc gactaaaaaa taaaggctac aacgcctatg tcaacgaggt cgagttccgc
     2041 ggcaaaccct ggtttcgggt cagcgtcggc aagtacggct cgcgtgggga agccgacaaa
     2101 atcgtcggcg cgctcaagga caaagaaaac tatgcgaaag cgttcgcggc atccaggtaa
     2161 gccgggtgac gataggccat gaacatacgc gaagccatcg ataaattagt caaccgcatc
     2221 gacttgacgg agatacaaac cgtcgatgtc atgaaccaga tcatgaccgg cgaagcgacg
     2281 ccgctacagg tggcgtcctt tctgaccgcc ctgcgcatga aaggcgaaac cgtcgacgag
     2341 atcaccggcg cggccagggt gatgcgcgag aaagcgcacc gggtcaacgt cggtgctaag
     2401 acggtgctcg atacctgcgg caccggcggc gatcaaaagg ggactttcaa tatttcgacg
     2461 accgcagctt tcgtggtcgc cggcgccggc gtcactgtcg ccaagcatgg caatcgttcg
     2521 gtatcgagcc agtcgggcag cgccgatgtc ttggggacgt tgggcgtcaa ggtcgatgag
     2581 ccgagagagc tggtcgagca gtgcatcgcc cagatcggta tcggtttcct gtttgcgcca
//
LOCUS       DATIRS010001051         2484 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_473966, whole genome shotgun sequence.
ACCESSION   DATIRS010001051 DATIRS010000000
VERSION     DATIRS010001051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2484)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2484)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2484
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_473966"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..189)
                     /locus_tag="VLM90_13335"
     CDS             complement(<1..189)
                     /locus_tag="VLM90_13335"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSQ14004.1"
                     /translation="MKIVHTMIRVNHLDESLKFYCDGLGMKLLKKRDYESGRFTNAFV
                     GYGSEETDAVIELTYNWDT"
     gene            complement(255..1235)
                     /locus_tag="VLM90_13340"
     CDS             complement(255..1235)
                     /locus_tag="VLM90_13340"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ14005.1"
                     /translation="MSAFDFGVGLFPTEPLQKMIHLAKVSEESGYSHIWVGDSHLIWR
                     EAYVNMTAMMLNTTNVKFGTGVTNPLTRHPSVLASAYATLEEYAPGRMIVGIGLGDSS
                     VETMGLKPSTLANFEKSLEQMRELFAGKEAELPSGKIHLLHPCKGKVPIYIAASGPKM
                     LELSGRIADGIIVLVGVADEYIAHAKEKIAAGAKAAGRKLEDINLVLWVPCAVSDSAP
                     AKDAVKAHVARVVAHPLPYVLDPNEQKVLEEIRKTYDYYHHMDQQANHAEVIPDWLVD
                     KFAIAGTVAECRAQIERIQKTGIQQIAIIPYSPPGGSREETSHGFAKAMS"
     gene            complement(1248..2420)
                     /locus_tag="VLM90_13345"
     CDS             complement(1248..2420)
                     /locus_tag="VLM90_13345"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ14006.1"
                     /translation="MSSILIKNIGALVTGKLESPLRQADSIFIKDGIVQAIGKGLSQA
                     ADQTIDANGITAIPGLIDSHSHPSIGEDTPAQNTLGWITNYMHGGVTALISAGELHLP
                     GLPLPPDARTALSVAIVTKKCYDNLRPSGVKVHAGTLLLVPGLTEKDFDEIHALGIKL
                     VKFIFYDYSLLPNGEAECYVNWAHARGIKVKIHSGGVSRSGVSQVAGFEMVRKIKPDI
                     IGHITGGPIPMPEEDMLRIASETECFMEICTSGNYRLALVLAQTVKAKNLHHRVLIGT
                     DTPGGTGIVPRGILREIAFLSSVGEIEPEKSICMATGNVGRAHDLNIGILEEGRPADV
                     VLLHKITGSVAKDALDSFATGDLPGISYVIIDGVVQVAGRSQQTPPPERVASESCC"
BASE COUNT          507 a          726 c          697 g          554 t
ORIGIN      
        1 ggtatcccaa ttgtaggtga gctcgatgac cgcgtcggtt tcctccgatc cgtaaccgac
       61 gaaagcgtta gtaaagcggc cagactcata gtctcttttc ttcaagagtt tcatgccgag
      121 cccgtcgcaa taaaatttca aactctcgtc aagatgattc actcggatca tcgtatgaac
      181 aattttcatg agcgcctccg tttttctgcg aacggtcgat gcaaccgtca caatcttttc
      241 acgactcata gaatctagct catcgccttg gcaaatccat gactagtttc ttccctgctc
      301 ccgcccggcg ggctgtaggg aatgatcgcg atttgctgaa tgccggtttt ttggatgcgc
      361 tcgatctgcg cgcggcattc ggcaactgtc ccagcgatgg cgaatttatc gaccagccaa
      421 tcggggatca cttcggcgtg gttcgcctgc tggtccatgt gatggtagta atcgtaggtt
      481 ttgcggatct cttcgagaac tttttgttcg ttgggatcga gcacgtacgg caacggatgg
      541 gccaccacgc gggcgacgtg ggctttgacc gcgtccttcg ccggcgcgct gtcggaaacg
      601 gcgcacggca cccagaggac gagattgatg tcttcgagtt ttctgcccgc ggccttcgcg
      661 ccggcggcaa ttttttcttt tgcgtgcgcg atatattcat cggccacacc gaccagaacg
      721 atgatgccgt cggcaatgcg gcccgaaagc tcgagcatct tcggtccgct cgcggcgata
      781 tagatcggta ctttgccctt gcacggatgg agcaggtgaa tcttgccact cggcagctcg
      841 gcttccttgc cggcgaataa ctcgcgcatc tgttccaatg acttttcaaa gttggccaag
      901 gtcgacggct tcaagcccat agtttccacc gagctgtcgc ccaagccgat gccgacgatc
      961 atgcggcccg gcgcatattc ctccagcgtc gcgtaggcgc tggcgagcac cgagggatga
     1021 cgcgtcagcg gattggtcac gccggtgcca aacttcacgt tcgtcgtatt gagcatcatc
     1081 gccgtcatgt taacgtaagc ctcgcgccag atgaggtgcg agtcgccgac ccagatatga
     1141 ctgtagccag actcttcgct aaccttggcc agatgaatca ttttctgcag gggttcggtg
     1201 ggaaaaagtc ctacaccgaa atcaaaagcg ctcacttcgt cttctcctta acaacaagat
     1261 tcgctggcga cgcgctcggg tggcggcgtt tgctggctgc gcccggccac ctgcacgacg
     1321 ccgtcgatga tgacgtaaga tatgcccggc aaatcgcccg tggcgaaaga atccagcgcg
     1381 tccttggcaa ccgaaccggt gatcttatgc agcaacacca catccgccgg gcggccttct
     1441 tccaaaatgc caatattcag atcatgggcg cgcccgacgt tgcccgtggc catgcaaatg
     1501 gatttctccg gttcgatttc accgacggaa gatagaaaag cgatctcgcg caagatgccg
     1561 cgcggcacga tgcccgtgcc gccgggagta tcggtgccga tgagcacgcg atggtgcaag
     1621 ttttttgctt tcacagtctg agcaagaacg agggccaagc gataatttcc cgacgtgcag
     1681 atttccatga aacattcggt ttcgctggcg atgcgaagca tgtcctcttc cggcatcggg
     1741 atcggaccgc cggtgatatg gccgatgatg tccggcttga tcttccgcac catctcgaag
     1801 ccggccacct ggctcacacc cgagcgcgat acgccgcccg aatgaatttt tactttgatg
     1861 ccgcgcgcgt gagcccagtt gacgtagcac tcggcttcgc cgttgggcag caaactgtaa
     1921 tcgtagaaaa taaacttgac gagcttgatg ccaagagcgt gaatctcgtc gaaatccttt
     1981 tccgtcagtc ccggcaccaa cagcagcgtt ccggcgtgaa ccttcacccc cgacggccgc
     2041 aggttgtcgt agcacttctt ggtgacgatg gcgacggaca acgccgtgcg cgcgtccggc
     2101 ggcagaggaa gcccgggcag atgcagctcg ccggcggaga tcagcgcggt cacaccgccg
     2161 tgcatatagt tggtgatcca gccgagcgtg ttttgcgccg gcgtatcttc gccgatggac
     2221 gggtgcgaat gggaatcgat cagaccggga atcgccgtga taccgttggc gtcaatggtc
     2281 tggtccgccg cttggctcaa acctttgcca atcgcttgca caatgccgtc tttgatgaaa
     2341 atcgaatccg cctgccgcag cggactctcc aatttccccg tcaccaatgc gccgatgttc
     2401 ttgatcagga tcgaagacat ggccggacta tagcaaagcg gcggtgggag aaaaagtcac
     2461 gccggctaat ggcgcaacgc cgcc
//
LOCUS       DATIRS010001052         2142 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1260941, whole genome shotgun sequence.
ACCESSION   DATIRS010001052 DATIRS010000000
VERSION     DATIRS010001052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2142
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1260941"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..626
                     /locus_tag="VLM90_13350"
     CDS             <1..626
                     /locus_tag="VLM90_13350"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HSQ14007.1"
                     /translation="GSCSFSGRDDRDGRWFSLYDICRGGAGARPRSDGVSVLDSFVVN
                     VMNTPVEMVEAEFPIRIRRYQLHEESGGAGRYRGGMGIRRDWEMLCEEATVNLRSDRF
                     LHSAPGIGGGGPARPSSAALNPDSANAKPQRSKVSKLLLKKGDVFSVQYGGGGGRGKP
                     HDRPVEQVLEDVWNGYISNETARRVYGVVVEGWPPRVNENETKRLRS"
     gene            667..>2142
                     /locus_tag="VLM90_13355"
     CDS             667..>2142
                     /locus_tag="VLM90_13355"
                     /inference="COORDINATES: protein motif:HMM:NF014071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HSQ14008.1"
                     /translation="MSLRVGIDVGGTFTDITVLDEASGEIREVKKVPSNPQRQIEVFD
                     HVLEELSSQWGAEAVSYLLHGSTHALNAILEEKGAVTGLLVTEGFRDVYEVARQWKGD
                     EVMNILYPGATRFIPRRRIGQVRERVDFQGNVLVPLDLSTVDHAIDELVGQGIEALAI
                     VLLHSYANPAHERQVAAHVRQRFPNLYISLSSEVNPLWREYERTCSTVINSYVGPQMG
                     RYLSQLEQSAKKRLRSAYPLVMKSSGGVGTPSFLGRFPIHTLMSGPVAGVVAAHELGQ
                     SLGRKNVLGLDVGGTSCDVSLIPGAPLFRSEWAIGRHPVRVDSVEVDSIGAGGGSIAR
                     VRYGSVLQVGPQSAGANPGPACYMRGGTEPTLTDALVELGQLNPSVLLGGGMAIDRQL
                     STRAIQSVIAGPLNLSVHDSALGIERVLVANVVSTMRTLTVERGYDPREFSLVAFGGM
                     GPTVGTAVAAALGISEVIVPANPGNFSAYGMLLSDLRYDLVI"
BASE COUNT          378 a          603 c          710 g          451 t
ORIGIN      
        1 gcggctcttg ttcgttctcc ggccgtgacg accgcgatgg ccggtggttt tcgctctacg
       61 atatctgccg aggtggcgcc ggcgcgcggc cgcgctcgga cggcgtcagc gtgctcgatt
      121 ccttcgtcgt aaacgtcatg aacacgccgg tggagatggt cgaagcggaa tttccgatcc
      181 gcattcgccg ctaccaactt cacgaggagt ccggcggcgc cggacggtac cgcggcggca
      241 tgggcatccg gcgcgattgg gagatgcttt gcgaggaggc gacggtgaat ttgcgcagcg
      301 atcgctttct ccattccgcg ccgggcatcg gcggcggcgg tccggcgcgg ccgtcatcgg
      361 ctgcgttgaa tccggattca gctaacgcca aaccgcagcg ctcgaaggtt tccaagctgc
      421 tgctgaaaaa aggcgatgta ttttccgtgc agtatggcgg cggtggtggc agaggcaagc
      481 cgcatgatcg gccggtcgag caggtgttgg aagatgtttg gaacggttac atcagcaacg
      541 agacggcgcg gcgagtttac ggtgtcgtcg ttgaaggctg gccgccaaga gtgaatgaga
      601 acgagaccaa gcgattacga tcgtgaaaag ctgaatctcg cggagatcat gagttaaaga
      661 gatgctatga gcttacgtgt cggcatcgac gttggcggga cctttaccga catcaccgtt
      721 ctagatgaag cgagcggtga gatcagggag gttaaaaagg ttccgtccaa tccgcagcgg
      781 cagattgagg tcttcgatca tgtccttgaa gaactgagtt cccagtgggg cgccgaggcg
      841 gtgtcttatc tgctccatgg ctcgacccat gcgcttaatg cgatcctcga agaaaagggg
      901 gcggtcaccg gcttgctcgt gaccgaaggt ttccgcgacg tttacgaagt ggcgcgccaa
      961 tggaagggtg acgaggtgat gaacatcctc tatcccggcg cgacccgttt cattccgcgc
     1021 cggcgcatcg gccaggtgcg cgagcgggtg gacttccaag gcaatgtgct ggtgccgctg
     1081 gatttatcga ctgtcgatca cgccatcgat gaattggtcg gccaaggcat cgaagcattg
     1141 gcgatcgtct tgctccactc ctacgccaat ccggcgcatg agcgccaagt ggccgcgcat
     1201 gtgcgccagc gatttcccaa tctctatatc tcattgtcct ccgaagtgaa tcccttgtgg
     1261 cgcgagtacg aacgtacctg ttcgacggtg atcaatagct atgtcgggcc gcaaatgggt
     1321 cgctatttgt cgcagttgga acagtcggca aaaaaacgcc tgcgcagcgc ttatcccctg
     1381 gtcatgaagt cgagcggcgg tgtcggtacg ccgtcatttc tcggccgctt cccgattcac
     1441 accttgatgt cggggccggt ggccggcgtg gtggccgccc atgagcttgg tcagagtctg
     1501 ggccggaaga atgtgctcgg cctcgatgtc ggcggcacca gttgcgatgt ctcgctgatt
     1561 cccggcgcgc cgctgtttcg ctccgagtgg gccatcggcc gtcacccggt gcgcgttgat
     1621 tccgtcgaag tcgacagcat cggcgccggc ggcggtagta tcgccagggt gcgttacggc
     1681 agcgtgctgc aagtcggtcc gcaaagcgcc ggcgccaatc ctggcccggc ctgctacatg
     1741 cgcggcggca ccgagccgac gttgaccgat gcgctggttg agttgggcca gctcaatccg
     1801 tcggtgctgc tcggcggcgg gatggcgatc gatcggcagc tgtcaacgcg ggcgattcaa
     1861 tcggttatcg ccgggccatt gaatttgtcg gtgcatgact cggcgcttgg catcgagcgc
     1921 gtgttggtcg ctaacgtggt atcgaccatg cgcacgctca ccgtcgaacg cggttacgat
     1981 ccacgcgagt tcagtctagt cgcgttcggc ggcatggggc cgacggtcgg caccgcggtg
     2041 gccgcagcat tgggcattag cgaggtgatc gtgccggcca atcccggcaa ctttagcgcc
     2101 tatggcatgc tgctgtccga cctgcgttac gatttggtga tt
//
LOCUS       DATIRS010001053         1941 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_670350, whole genome shotgun sequence.
ACCESSION   DATIRS010001053 DATIRS010000000
VERSION     DATIRS010001053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1941)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1941)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1941
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_670350"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1628)
                     /locus_tag="VLM90_13360"
     CDS             complement(<1..1628)
                     /locus_tag="VLM90_13360"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSQ14009.1"
                     /translation="MASVRPHFVPIPTQDAPESGRLILRDGTTASIRVAHSNDEAAMT
                     QFFASLSNESRRHRFFSQVVPDGKLVSSFCDASDPRKRLTLIVTQLTGGVERVIAVGT
                     YMARDATAAEIGLAVADACQGKGIGTLMLERLALIAAANGIRHFWAMTMFENQQMLNV
                     FRESGFDCRTKTDRGVVEIDLSLVPSAASVAHAALCDRVATAASLRPFFHPNAVAIVG
                     ASRNPANIGTRLLQAAIDAGFQGTLYPINPKTAAIGSLRAYPSVRDLPEAPDLTVIVV
                     PRDAVLEVVDDCAARGVRAVVVITAGFAEIGAEGRELQRQLVDKVRGHGMRLVGPNCL
                     GLLNTDPAVRLNASFAPDFPPPGRIAFSSQSGALGLAIISLARQRGLGLSKFVSVGNK
                     ADVSGNDLLQYWEQDGQTDVILLYLESFGNPRRFARIASRVSRHKPIVAVKAGRTGAG
                     KRAASSHTAALAASDVAVDALFHQTGVIRAESLGEMFDLAAAMSAQPLPDGRRVALLT
                     NAGGLGILCADTCEANGLQVQELSEATKNHLKEF"
BASE COUNT          406 a          558 c          604 g          373 t
ORIGIN      
        1 aaaaattcct tgagatgatt tttggttgct tcgctcagct cttgaacttg cagaccgttg
       61 gcttcgcagg tgtcggcgca caggatgccc aagccgccgg cgttggtgag tagcgcgacg
      121 cggcggccat cgggcagcgg ttgcgcgctc atcgccgcgg cgagatcgaa catttcaccc
      181 agagattcgg cgcggatcac gcccgtctgg tgaaatagcg cgtcgaccgc gacatcgctg
      241 gcggccaagg ccgcggtgtg cgagctggcg gcccgtttgc ccgcgccggt tcgccccgct
      301 ttgacagcaa cgatgggttt gtgtcggctg acacggctcg cgatgcgggc aaagcgtctg
      361 gggttgccga aggattctag atagagaagg atgacatcgg tttgcccatc ttgctcccag
      421 tattgcagca ggtcgttgcc cgagacatcc gctttgttgc cgacgctaac aaacttcgac
      481 aagccgagtc cgcgctgacg cgccaaggaa atgatcgcga gaccgagcgc gccgctttga
      541 gatgagaaag cgatgcgccc gggcggtgga aagtcgggcg cgaacgaagc gttcaaccgc
      601 accgccgggt cggtattcaa cagaccgaga caattcggtc cgaccaggcg catgccgtgg
      661 ccgcgcactt tatcgacgag ctggcgttgc agttcccgcc cctcagcgcc gatctcggca
      721 aatcccgcgg tgatgacgac gacagctcgc acgccgcgcg cggcgcagtc gtcgacgact
      781 tccaagactg catcgcgcgg cacgacaatc accgtgagat ccggcgcttc cgggagatcg
      841 cgcaccgacg gataggcgcg cagcgaaccg atggccgcgg tctttggatt gatcggataa
      901 agtgtccctt gaaagccggc atcgatggcc gcttgcagaa gtctcgtgcc gatgttggcc
      961 ggattgcgcg aggcgccgac gattgcgacg gcgttgggat ggaagaacgg ccgcagggaa
     1021 gccgcggtgg caacccggtc gcacaatgcg gcgtgcgcga cacttgccgc gctcggaacc
     1081 agagacagat cgatttcgac aacgccccgg tcggttttag tccggcaatc aaaacctgac
     1141 tcgcgaaaca cgttgagcat ctgttggttt tcgaacatcg tcatcgccca aaaatggcga
     1201 atgccgttgg cggcggcgat gagcgctaaa cgctcgagca tcagcgtgcc gatgcccttg
     1261 ccttggcaag cgtcggcgac cgccaggccg atctctgctg cagtggcgtc cctagccatg
     1321 taagtgccaa cggcgatgac tctctccacg cctccggtta gttgtgtgac gattagagtc
     1381 agccgcttac gcggatcgct ggcgtcgcaa aaggagctga ccaatttgcc gtctggaacc
     1441 acctgcgaaa agaaccgatg ccgtcgcgat tcgttcgaca gtgaagcaaa gaactgggtc
     1501 atcgccgctt cgtcgttcga atgggcaacg cgaatcgaag ccgtcgtgcc gtcgcgcaag
     1561 atcaaccggc cggactccgg cgcatcctgg gttgggatcg gcacaaaatg aggacgaaca
     1621 gatgccaccg tttcttacta agcttctgca gcggtgtttt caaggaacca gtcggcctac
     1681 cgctaagcga tggcctcgaa cctcgctgcc tgagctcaat gttgaccgcg agagtttcca
     1741 tgagcacgat gcattgacac taaaacactt tagatggacc taatttcggt ggcaattcgc
     1801 aagtgaagtt tctgaagcgc caaagtttca gcgccggatt tgacagggga tctgaatttg
     1861 gcggggtcgt gcattcgaca ggaatcgaaa ctgtgcttgg ggtaaggaag actcaaaata
     1921 ccggagaatt aattcggacg c
//
LOCUS       DATIRS010001054         2387 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_474073, whole genome shotgun sequence.
ACCESSION   DATIRS010001054 DATIRS010000000
VERSION     DATIRS010001054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2387)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2387)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2387
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_474073"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..305)
                     /locus_tag="VLM90_13365"
     CDS             complement(<1..305)
                     /locus_tag="VLM90_13365"
                     /inference="COORDINATES: protein motif:HMM:NF012337.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HSQ14010.1"
                     /translation="MKRRVAVTGMAGISPIGNDWPSVRARLGEYRNAVKRMDEWSDYD
                     GLHTLLGAPAAEFALSERYTTKALRSMGRVALLAPRASELALVNAGLAGDPLVTSGHL
                     "
     gene            complement(302..1027)
                     /gene="fabG"
                     /locus_tag="VLM90_13370"
     CDS             complement(302..1027)
                     /gene="fabG"
                     /locus_tag="VLM90_13370"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: protein motif:HMM:NF004200.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HSQ14011.1"
                     /translation="MSLSVVVTGSSRGIGKAIALRLAGDGFDIIVHCHSRRAEADDVA
                     AAITAKGRHARVLQFDIANRAAVAAALATDIAEHDCYYGVVCNAGVVRDNAFPAMSGE
                     DWDIVLQTNLDGFYNVLNPLIMPLVRRRAPGRIVTLSSVAGVIGNRGQVNYSAAKAGI
                     IGATKALALELAKRGITVNCVAPGLIETDMSAGVPLDEALKLIPARRLGRPEEVAALV
                     SFLFSADAGYITRQVISVNGGLA"
     gene            complement(1024..1476)
                     /locus_tag="VLM90_13375"
     CDS             complement(1024..1476)
                     /locus_tag="VLM90_13375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hotdog family protein"
                     /protein_id="HSQ14012.1"
                     /translation="MTLPDIRDLMPHSGPMVLLDRVIAAYDESLRAEGRVRANSLFFV
                     DGAIGGWVGLEYMAQAIGAYAGYRSRLRGEPVRIGYLLGTRHYECRQPSFALGSRLEI
                     YVKRVLQSQDGLAAFDCRIDDETGMVASANVTVFQSADGDKPMNGSLT"
     gene            complement(1478..>2387)
                     /locus_tag="VLM90_13380"
     CDS             complement(1478..>2387)
                     /locus_tag="VLM90_13380"
                     /inference="COORDINATES: protein motif:HMM:NF012337.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HSQ14013.1"
                     /translation="ARVGVVIGTSTSGVAEAEAALRDYLSTGALPEGFHYGQQELASP
                     ATVLARELGICGPAYVHSSACASSAKALASAARLIRMNACDAVLAGGVDTLCRFTVAG
                     FAALESLSTTRCNPLSRNRDGINIGEGAALFLVSREPATVSLRGWGESSDGYHMSAPD
                     PAGVGGRLALEQALARAAVTAAEIEYINLHGTATVQNDAMEAELIHRVFGGHHVFVSS
                     TKPFTGHALGAAGAIEAGLCWLAMQDDNPTGKLPAHLWDGSDDPKLPVLQLATPTTRL
                     GHPPRWAVSNSFAFGGANVTLVLARD"
BASE COUNT          460 a          793 c          718 g          416 t
ORIGIN      
        1 aggtggccgc tcgtcaccaa cggatcgccg gcgagcccgg cgttaacgag cgcgagctcg
       61 ctggcgcggg gcgcaagcaa agcgactcgc cccatgctgc gcagcgcctt ggtggtgtag
      121 cgctccgaca gggcaaactc cgccgccggt gcgcccaaca gggtatgcag cccgtcgtaa
      181 tcgctccact cgtccatgcg tttgaccgcg ttgcgatact cgcccaagcg cgcgcgcacg
      241 ctcggccaat cgttgccgat cggactgatg ccggccatgc cggtcacggc gacgcggcgt
      301 ttcatgccaa acctccgttg accgagatca cttggcgggt aatgtatccg gcgtcggcgc
      361 taaagagaaa gctcaccagc gcggcgactt cttccggccg gccgagccgc cgcgccggaa
      421 tcagcttgag cgcttcgtcg aggggcacgc cggcgctcat gtcggtttcg atcaggccgg
      481 gagcgacgca attgaccgtg atgccgcgtt tggcgagctc caaggccaac gccttggtgg
      541 cgccgatgat gcccgccttg gccgcgctgt agttcacttg gccgcggttg ccgatcacac
      601 cggcgaccga tgataacgtc acgatgcggc ccggcgcacg ccgtcgcacc aacggcatga
      661 tcagcggatt aagcacattg taaaagccat cgagattggt ttgcagcacg atgtcccaat
      721 cctccccgct catcgccgga aacgcgttgt cgcgaaccac gccggcgtta caaaccacgc
      781 cgtagtaaca atcatgttcg gcaatatcgg ttgcgagcgc ggccgcgacc gcggcgcggt
      841 tggcgatatc gaactgtaag acgcgcgcgt gccgtccctt ggcagtaatc gctgcggcga
      901 catcgtcggc ctcggcgcgc cggctgtgac agtgcacgat gatatcgaag ccatcgcccg
      961 ccaagcgcag ggcgatggct ttgccgatgc cccggctcga gccggtcact accacactca
     1021 gactcatgtc aacgatccgt tcatgggttt gtcgccatcg gcggactgga acacggtaac
     1081 gttagcgctg gccaccatgc cagtctcatc atcgatgcgg caatcgaagg cggccaagcc
     1141 gtcttggctc tgcaagacgc gtttgacgta aatttctaac cggctgccca aggcgaagct
     1201 tggctgcctg cactcgtagt gccgggtgcc aagcaaataa ccgatgcgca ccggctcacc
     1261 gcgcaggcgg gatcgatagc cggcataggc gccgatggcc tgcgccatat attctaatcc
     1321 gacccaccca ccaatggcac cgtcgacgaa aaacaaactg ttagcgcgca cccgcccttc
     1381 ggcgcgcaga ctctcgtcat aggcggcgat cacccggtcc agcaaaacca tcggtcccga
     1441 gtgaggcatt aaatcgcgaa tgtccggtag agtcatgtca atctcttgct agtaccagcg
     1501 tcacgttggc accgccaaaa gcgaacgagt tgctcaccgc ccagcgcggc ggatgtccta
     1561 gtctggtcgt cggcgtagcc aattgtaaca ccggtaattt aggatcgtcg ctgccatccc
     1621 ataaatgggc cggcagctta ccagtcggat tgtcgtcctg catcgccagc cagcacagtc
     1681 ccgcttcgat cgcccccgcc gcccccagag catggccggt aaagggtttg gtcgagctga
     1741 cgaaaacatg atgaccgccg aacacccgat ggattaactc agcttccatg gcatcgttct
     1801 gcaccgtggc ggtgccatgt aaattgatat attcgatctc cgccgccgtt accgcggcgc
     1861 gcgccagagc ctgttctagc gccaagcgcc cgccgacgcc agcaggatct ggcgccgaca
     1921 tatggtagcc atcggacgac tcgccccaac cgcgcaggct caccgttgcc ggttcgcggc
     1981 tgacgagaaa taatgccgcg ccctcgccga tgttgatgcc gtcgcgattg cggctgagcg
     2041 gattacagcg cgtcgtgctg agcgattcaa gggcggcgaa accggccacg gtgaagcggc
     2101 atagagtgtc aacgccgccg gccagcaccg cgtcgcaagc gttcatgcgg atcagccgcg
     2161 ccgcgctggc cagcgccttg gcgctcgacg cgcaggcgct ggagtggaca taggccggtc
     2221 cgcaaatacc cagctccctc gccaagaccg tagccggtga agccaactct tgctggccat
     2281 agtgaaaccc ttccggcaac gcccccgtcg acagataatc acgtagcgcg gcttccgctt
     2341 cggcgacgcc ggaggtgctg gtgccgatga cgacaccgac gcgtgcg
//
LOCUS       DATIRS010001055         1634 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1555818, whole genome shotgun sequence.
ACCESSION   DATIRS010001055 DATIRS010000000
VERSION     DATIRS010001055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1634
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1555818"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(18..1154)
                     /locus_tag="VLM90_13385"
     CDS             complement(18..1154)
                     /locus_tag="VLM90_13385"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ14014.1"
                     /translation="MRDGFKVIDADRHVLEPTDLFAKYLPEKFRGRVEIKGPNQSYRL
                     VDGEKISDADQLRDVTKQEDFGFTFGASKRWRETFADALAAKFDPASNVRDMDKEGVD
                     FGVLFPPVGLYIMWRDNLDPELSAAICRAYNTWLSDYCDFDRKRLNGVALLPLQDPAR
                     AVEELKYAKEKLGLVGIFWRPNKLCGRTLSSPDYYPIYEAAADLGVAVCVHEGARTVM
                     QQAGSDRYSEFGRHVACHPLEQMLACLNFCADGVLEKFPKLKVAYLESGCGWVPFWLE
                     RMDEHWEHEGHGQAKTTKEKPSYYFKRQCFSSAEAGEELAPVFIEHVGADYLTIATDY
                     PHSDCIGKFPDRTVGDLTKNDHISTEARRKILWDNPMRLYGLEV"
     gene            complement(1305..>1634)
                     /locus_tag="VLM90_13390"
     CDS             complement(1305..>1634)
                     /locus_tag="VLM90_13390"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HSQ14015.1"
                     /translation="RMVTIGRADYIQPSIVKLGITAMAKVAAEVETAGALCVPNAFYL
                     GPAFLAVLHCLAAKDKESPLERMFADFGATPFAKTVPIINGGVEVPQDPGLGADPEDD
                     LIAKFRV"
BASE COUNT          339 a          472 c          472 g          351 t
ORIGIN      
        1 aaacttgccc attttcccta aacctccagt ccgtacaggc gcatcggatt gtcccacaga
       61 attttccgcc gcgcttctgt tgaaatatga tcgttcttgg tcagatcgcc caccgtgcga
      121 tcgggaaact tgccgataca atcgctgtgc ggataatcgg tggcgatggt caaataatct
      181 gcgccgacat gctcgataaa cacgggcgcg agctcttcgc cggcctccgc gctggaaaag
      241 cattggcgtt taaaataata actgggtttt tccttggtgg tcttggcctg gccgtggccc
      301 tcatgctccc agtgctcatc catacgctcg agccagaacg gcacccatcc gcagcccgat
      361 tccagatagg cgaccttgag cttgggaaat ttttccagca caccgtcggc gcaaaaattc
      421 aaacaggcga gcatttgttc gagcgggtgg caggcgacgt gccggccgaa ttcgctgtag
      481 cggtccgagc cggcttgttg catgacggtg cgcgcccctt cgtgaacgca aaccgcgacg
      541 ccgagatccg cggcggcctc gtagatggga tagtaatcgg ggctcgacag cgtccggccg
      601 cacaatttat ttggccgcca gaagatgccg accaaaccga gtttctcttt ggcgtatttc
      661 aattcttcga cggcgcgcgc gggatcttgc aggggcagca aggcaacgcc gttcagtctc
      721 ttgcgatcga agtcacaata gtcagacaac caggtgttat aagcgcggca aatcgcggcg
      781 ctgagctcgg ggtcgagatt gtcgcgccac atgatgtaga gccccaccgg agggaaaagc
      841 actccgaagt cgacgccttc cttatccatg tcgcgaacgt tcgatgccgg atcgaacttg
      901 gcggccagcg cgtcggcaaa ggtttcgcgc cagcgcttgg aagcgccgaa ggtgaagcca
      961 aaatcttctt gcttggtgac gtcgcgcagt tggtcggcgt cggaaatctt ttcgccgtcg
     1021 accagtcgat aggactggtt cggccctttg atttccacgc gtccgcggaa tttttccggc
     1081 aaatatttcg cgaacaagtc ggtcggctcc agcacatgac ggtcggcgtc gatgactttg
     1141 aatccgtctc gcattttcaa actccttcgt tggattgtaa tcggctggcg cggcgagatg
     1201 tgaatgcgac cgacaaatta ccgcgcgcgc cccatcattc ataggacgag ttgacgaagc
     1261 gagtcaacag caaggaagcc tgaggcgcga gcgacagtgc ggacttacac tctgaacttt
     1321 gcaatcaggt cgtcctccgg gtccgcgccg agacccgggt cctgcgggac ttccaccccg
     1381 ccgttgatta tgggtacggt cttggcgaac ggagtagcgc caaagtcggc aaacatgcgc
     1441 tcgagcggcg actctttgtc cttggccgcg agacaatgca acaccgctag aaaagccgga
     1501 ccgagataaa acgcgttcgg cacgcagagg gcgcccgccg tctcaacctc ggctgctact
     1561 tttgccatgg cggtgatgcc cagtttgacg atgctgggct gaatgtaatc ggccctgccg
     1621 atggtgacca ttct
//
LOCUS       DATIRS010001056         7209 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1261064, whole genome shotgun sequence.
ACCESSION   DATIRS010001056 DATIRS010000000
VERSION     DATIRS010001056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 7209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7209
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1261064"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1093)
                     /locus_tag="VLM90_13395"
     CDS             complement(<1..1093)
                     /locus_tag="VLM90_13395"
                     /inference="COORDINATES: protein motif:HMM:NF015912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor region1.1
                     domain-containing protein"
                     /protein_id="HSQ14016.1"
                     /translation="MEKKNLKEVKKLIDLGKEKGYLTYDDVNDMLPAEVVSPDQIDDV
                     MSLFGEMDIEVVDANQRVTLGGAGDELVEEEEEEKEAEDADNDVVGKTGDPVRMYLRE
                     MGTVSLLSREGEVEIAKKIENGENRVLDEVLSSQLALTHILDLGEKLALHEVRVREII
                     KEEGDEENEDFEEEEVHAKRLLDQIGKIRRTVNEREKIKKQLEGKRVSAQRSQSLLDG
                     VAKYNERIISGLKNLQLNRKQTEVIADGLKRALERMQSMERRVKDYEHRLGKSGSEIL
                     KLVAAAEAQKKNWPKLTSTFRMGHDPILHMAEEIRNTRRDVRHIEKDLEMPSEEIKRR
                     VWSIIDGETRANLAKKELIEANLRLVVSIA"
     gene            complement(1132..2940)
                     /gene="dnaG"
                     /locus_tag="VLM90_13400"
     CDS             complement(1132..2940)
                     /gene="dnaG"
                     /locus_tag="VLM90_13400"
                     /inference="COORDINATES: protein motif:HMM:TIGR01391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HSQ14017.1"
                     /translation="MISQDKIAEIRNRASIVEVISDYVTLKKAGRNHLGLCPFHGEKT
                     PSFTVNEEKGIYHCFGCHAGGSVFQFLMEYDHQSFPEAVEQVAKRYGIVIERSDAGNY
                     QRDLGERENLFRINERAAANYQRILFDHPEGKAALEYLKRRGVDDAIAHKFMLGFAPQ
                     GGSGLVGLVKKESLALADAIKLGLVGQRNAQQYYEKFFARVMFPIANAAGKIVGFGGR
                     VIDQGMPKYLNSSETPLFHTGSTVYGLHQAKEGIRQADRVVVVEGYLDVIALAQHGIG
                     YAVATLGTALTVEHVRALSRYTKNIIALFDGDDAGLKAAARSFEIFVEAGLLGRAAFL
                     PKDEDPDSFVRQQGKDAVEKLLDQAVPMADFYFSWLQRRDGSTIEGKSQTAAEIGRLL
                     AKVTNPFEVDLLIRRAADLGVREELLRRPVANAANRRPVLPNRPSAVVAATAPSDSRD
                     DIAERSLVGLVLRVPALLEKLARETRVRQCFSDKWRPVVDAIILEWQETGNIDIGAIT
                     QKLPEQRVSEFAALVLEAENRSDAECAKMAGDCLNHLQRKYLKIQERDLRIAIRAAEE
                     KRDEIAKRERILEWQDLLQEKRQLERRRLEPKLSPR"
     gene            complement(2950..3483)
                     /locus_tag="VLM90_13405"
     CDS             complement(2950..3483)
                     /locus_tag="VLM90_13405"
                     /inference="COORDINATES: protein motif:HMM:NF014704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HSQ14018.1"
                     /translation="MNWVDLILLAVLGIFGLRGFFRGLFREILSLAGLIVGFLVAARY
                     GDVAAQYAAQHWKFAPIMLKGAGFVAIFFVIYFGFSVAAWLLHRSEKMLFLKSVNRVG
                     GIAIGVGKGAAVAALAIFLFSSSALLSQPTRDSLAGAYLVPPLSQLGESLIKAGKERI
                     FTGAGAAPTPAGGRQAI"
     gene            complement(3649..4095)
                     /locus_tag="VLM90_13410"
     CDS             complement(3649..4095)
                     /locus_tag="VLM90_13410"
                     /inference="COORDINATES: protein motif:HMM:NF020977.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HSQ14019.1"
                     /translation="MDLKAEIQQAVKAAMKGGDTVTLSSLRLLLAALQNEEIRLRRAL
                     SADEIHRIIGTLCKQRGEAIELYRKGGREELAAKEEAELVILQGFLPQQLSDDEIKSA
                     VQASIDEAGASGLADFGKVMKLVMPKVAGRSDGKRVSDLTKALLGG"
     gene            complement(4122..4316)
                     /gene="rpsU"
                     /locus_tag="VLM90_13415"
     CDS             complement(4122..4316)
                     /gene="rpsU"
                     /locus_tag="VLM90_13415"
                     /inference="COORDINATES: protein motif:HMM:TIGR00030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HSQ14020.1"
                     /translation="MTGVRVRDNESIESAIRRFKKLCEKAGILAELRKREHYEKPSVK
                     RKKKAIAAKKRALRRVRHAF"
     gene            complement(4508..5239)
                     /locus_tag="VLM90_13420"
     CDS             complement(4508..5239)
                     /locus_tag="VLM90_13420"
                     /inference="COORDINATES: protein motif:HMM:NF015000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /protein_id="HSQ14021.1"
                     /translation="MPSFKKIAHRGASGQYPENSRLAFENAIAAGADMIELDCQLSAD
                     GHVVVFHDERLARTTGARGKVSDKTLAQLRALDIGKWRKPAFRGEKILTLEEALEIFA
                     GNVDLCLEIKVAAGAPPGIELKLLFILSHYDYLERTVISSFDYRSLARVRELAPEAAL
                     GVIHGAGLREDPIAAAERLAATSIHVQKQLAQREFCQRAWQAGLDLYVWTVNDRREIE
                     MFIDLGVQGIISDYPEKLCLIGRAG"
     gene            complement(5467..6192)
                     /locus_tag="VLM90_13425"
     CDS             complement(5467..6192)
                     /locus_tag="VLM90_13425"
                     /inference="COORDINATES: protein motif:HMM:TIGR00478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
                     /protein_id="HSQ14022.1"
                     /translation="MLLVERQLVVSREEGRRRILAGEVLVNRQPVTKAGNLIDRAAPI
                     TVIAAPPYVSRGGVKLEKALREFAIEVAGKSAIDIGASTGGFTDCLLVHGAAKVIAVD
                     VGYGQLDWKLRNDSRVVVLEKTNIRYLEPGGLPFIPTLATIDASFISLKLILPKVHSL
                     IASEGTVVALIKPQFEVGKGKVGKGGVVRSAEEHRRVIDEISLAAVDCGYRVLAVTES
                     PLMGPKGNKEFLLHLKMNSLATV"
     gene            complement(6195..>7209)
                     /locus_tag="VLM90_13430"
     CDS             complement(6195..>7209)
                     /locus_tag="VLM90_13430"
                     /inference="COORDINATES: protein motif:HMM:NF014798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HSQ14023.1"
                     /translation="HVLTGKAKKDKSPVPTYTEIFGQALVRLAKENPKIVGITAAMGS
                     GTGIDKLQRELPERTYDVGIAEQHAVTFAAGMATEGYVPVVAIYSTFLQRGYDEILHD
                     VCLQNLHVVLALDRGGLVGADGPTHHGVFDFAYMRSIPNMVIMAPKDENELQHMLKTA
                     IDHSGPISLRYPRGEGWNVALDERMHSLKIGKAELLRDGTDLVIAAIGNTAIPALRAA
                     QDLAPLGINAAVVNARFVKPLDEHLFRDLLTKVPRLITVEDHAISGGFGSALVEFLAD
                     DGIAGVDVKRLGVPDRFIPHGTQDELKKICGFDKDAIAQAALQMMRRGKKKIREGWER
                     GSA"
BASE COUNT         1459 a         2205 c         1925 g         1620 t
ORIGIN      
        1 tggcgatgct gacgaccaag cgaaggttgg cttcgatcaa ttctttcttg gctaggttgg
       61 cgcgggtctc accgtcgatg atcgaccaga cacgccgctt gatctcctcg gacggcattt
      121 ccagatcttt ttcgatatgg cgcacgtcgc gccgggtgtt gcgaatctct tcagccatat
      181 gcaggatcgg gtcatggccc atgcggaagg tcgaagtgag cttgggccag ttctttttct
      241 gcgcttcggc ggccgcgacc agcttgagaa tctcactgcc cgacttgccg agcctgtgct
      301 cgtaatcctt gacccgtcgt tccatcgact gcatgcgctc cagagcccgc ttgagaccgt
      361 cggcgatgac ctcggtctgt ttgcgattga gctgtaagtt ttttaggccg ctgatgattc
      421 tctcgttgta cttggcgacg ccgtcgagca gcgattggct ccgctgcgcc gacacgcgtt
      481 tgccttccag ttgtttttta atcttttcgc gttcgttgac ggtgcggcgg atcttgccaa
      541 tctggtcaag caagcgtttt gcatgaacct cttcctcctc gaaatcctcg ttttcctcgt
      601 cgccctcttc tttgatgatc tcgcggacgc gcacttcatg cagcgccagc ttttcgccga
      661 gatcgaggat atgggttaag gccagctggc tcgagaggac ttcatcgagg acgcggttct
      721 cgccattttc gattttctta gcgatctcga cttcgccttc acggctcagt agcgacaccg
      781 tgcccatctc acgcagatac atgcgcaccg ggtcgccggt cttaccgacc acgtcgttgt
      841 cggcgtcctc ggcctctttt tcctcttctt cctcttcgac cagttcgtcg ccggcgcccc
      901 ccagggtgac ccgctggttg gcatcgacga cttcgatatc catttcaccg aagagcgaca
      961 tgacgtcatc gatctgatcc ggcgatacca cctccgccgg cagcatgtcg ttgacatcgt
     1021 cgtaggtcag atatcccttc tccttgccca ggtcgatgag ctttttgacc tccttcagat
     1081 tctttttctc cactggctcg ccagcggcgt cggaggcgct cttcgctttg gctagcgtgg
     1141 acttagtttc ggctcgagtc ttcggcgttc tagctggcgt ttttcttgca ggaggtcttg
     1201 ccattctagt atcctttctc tcttagcaat ttcgtcacgt ttctcttccg ccgcacgtat
     1261 ggcgatgcgc aaatcgcgct cttggatttt taagtatttg cgctgtaagt ggttcaggca
     1321 atcgccagcc atcttggcgc attcggcatc ggatctgttc tcggcttcca acaccaaggc
     1381 ggcaaactcg ctgacccgct gctctggcaa cttttgggtg atcgcgccaa tgtcgatgtt
     1441 ccctgtttct tgccattcca agatgatcgc gtcaaccacc gggcgccatt tgtcgctaaa
     1501 acattggcgc acgcgcgttt cccgagccaa cttctcaagc agcgccggca cgcgcagcac
     1561 cagtccgacc agcgagcgct cggcaatatc gtcgcggctg tcactcggcg ccgttgccgc
     1621 aacgacagcc gatggacggt tcggcagcac cggccgccta ttggcagcat tcgcgaccgg
     1681 ccggcgcaac agctcctcgc gtacgcccag gtccgccgcc cggcgaatca acagatcgac
     1741 ttcaaaagga ttggtcactt tggcgagcaa ccggccaatc tcagcggcgg tctggctttt
     1801 gccttcgatg gtgctgccgt cgcgccgctg cagccaggaa aaataaaaat cggccatcgg
     1861 caccgcttga tcgagcagct tctccacggc gtccttgcct tgctggcgga caaagctatc
     1921 cggatcctcg tctttgggta aaaacgccgc gcggccgagc aaaccggctt cgacgaaaat
     1981 ctcaaaactg cgcgccgccg ccttcagccc ggcatcatcg ccgtcgaata atgcgataat
     2041 attcttggta taacgcgaaa gcgcgcgcac atgttcgacg gtcagcgccg ttcccaaagt
     2101 cgccacggcg taaccgatgc catgctgcgc cagagcgatc acgtcgagat aaccttcgac
     2161 cacgacaacc cggtcggcct ggcggatgcc ctccttggcc tggtgcagac cgtaaaccgt
     2221 cgaacccgtg tgaaacagcg gcgtctcgct cgagttcaga tacttcggca tgccttgatc
     2281 gatcacccgg ccgccgaagc cgacgatctt gcccgccgcg ttggcaatgg gaaacatcac
     2341 cctggcgaaa aacttctcgt aatactgttg cgcgttgcgc tggccgacca gaccgagctt
     2401 gatcgcgtcg gccaacgcta aactttcttt cttgaccaga ccgaccagtc ccgaaccgcc
     2461 ctgcggtgcg aagcccaaca tgaacttgtg cgcgatggca tcgtcgacgc cgcgccgctt
     2521 gagatactcc agcgcagcct tgccctcggg atgatcgaac agaatgcgct gatagttagc
     2581 cgcagcgcgc tcgttgatgc ggaaaagatt ttcgcgctcg cccaggtcgc gctgataatt
     2641 gcccgcgtcc gatcgttcga tgacgatgcc gtagcgtttg gcgacctgtt ccaccgcttc
     2701 ggggaaactc tggtgatcgt attccatgag aaactgaaac acgctgccgc cggcatggca
     2761 gccaaagcaa tgatagatcc ctttctcttc gttgaccgta aacgacggcg tcttttcgcc
     2821 gtggaacgga caaagtccca agtgattgcg gccggctttc ttgagcgtga cgtagtcgga
     2881 aatcacttcg acaatcgatg cgcgattgcg aatttcggcg attttatcct ggctaatcat
     2941 ggctaataac tagatcgcct gccgccctcc ggccggcgtc ggcgctgcgc cagcgccggt
     3001 gaagattcgc tccttacccg ccttgatcaa agattccccc agttgagaca gcggcggcac
     3061 caaataagca cctgcaagcg agtcacgggt gggctgggaa agcaatgcag aggaactgaa
     3121 caagaagatc gccagcgccg ccacagccgc gcccttgccg acaccgatgg cgatgccgcc
     3181 gacgcgattg acagatttca gaaacaacat tttttccgaa cgatgcagca gccaagcggc
     3241 gacgctaaaa ccgaaataaa ttacaaagaa aatcgcgaca aagcccgcac ccttgagcat
     3301 tatcggggca aacttccaat gctgcgcggc gtactgcgcc gccacatcgc cgtagcgcgc
     3361 ggcaaccagg aaaccgacga tgagtccggc cagtgataag atttcacgga agagacctcg
     3421 gaagaaccct cgaaggccaa atatcccaag aacggcaagc agaatcaaat cgacccaatt
     3481 caccagttgg cacccacccg cgttggcggc accgatcgtt aatcgctccg gccgctcgcc
     3541 atgttcgcac agtcgatata ttgtccggga aaccgggcga catccattgg catcgggctg
     3601 gaccgctcaa gcacccgcta gcccgagcga gcccaatccc aatatgccct aaccgcccag
     3661 caatgccttg gtgagatcgc taacccgttt gccgtcgctg cgtcccgcca ccttgggcat
     3721 tactaacttc ataacttttc cgaagtcggc aagcccactg gcgccggcct cgtcgatact
     3781 cgcttgaact gccgacttga tctcgtcgtc gctaagttgc tgcgggagaa acccctgaag
     3841 gatcacgagc tcggcttctt ctttggccgc cagctcctcg cgcccaccct tacggtacaa
     3901 ctcaatcgct tcgccgcgct gcttgcacag agtgccgata atcctgtgaa tctcatcggc
     3961 gctcagtgcc cggcgcaagc ggatctcttc attctgcagc gccgccaaca acaagcgcag
     4021 ggatgagagc gtcaccgtgt cgccgccttt catggcggct ttcacggctt gttgaatctc
     4081 cgcttttaag tccattgctg cgctggctct cgatttcgcg cttaaaacgc atgacgcacg
     4141 cgtcgtaggg cgcgtttttt tgcggcaatc gcttttttct tacgttttac gctaggcttc
     4201 tcgtaatgtt ctcgtttacg caattcggcg aggatgccgg ctttttcgca tagtttttta
     4261 aagcggcgga tggcgctttc aatcgactcg ttatctcgaa cacgaactcc ggtcatagaa
     4321 atgactcacc cccgatccag gcagaccgca cataaaccgg attcaatttt agctgataaa
     4381 tcattcaagt caagtaaaac acttttaaat ctaactgttt gcactaattg gcggagggcc
     4441 aacgaggctg gaatgagggt attacaggga cctagcaaca ggacaaaaaa cgccaacgtt
     4501 ttgtcaatca accagcgcgg ccaatcagac atagcttttc gggataatcg gaaataatcc
     4561 cctgtacacc caaatcgatg aacatctcga tctcacgccg atcgttgacg gtccagacgt
     4621 agagatctaa gcccgcctgc caggcgcgct ggcaaaattc acgttgcgcg agctgctttt
     4681 gcacatggat tgacgtcgcg gcaagccgct cggcggcggc gatgggatcc tcccggaggc
     4741 cggctccgtg aatcactccg agggccgcct cgggcgccaa ctcccgtacc ctggccaagc
     4801 tgcggtaatc gaaggacgag atcaccgtcc gctccaagta atcgtagtgg ctcaggatga
     4861 acagcagctt caactcgatg ccgggcggcg caccggcggc gactttaatt tctagacata
     4921 gatcgacgtt gccggcaaaa atttccagcg cctcttccag tgtcaagatc ttctcgccgc
     4981 gaaaggccgg cttgcgccac ttgccgatgt cgagggcgcg cagttgcgcc agcgtcttat
     5041 cagaaacttt cccgcgggcg ccggttgtac gcgcgagccg ctcatcgtga aacaccacca
     5101 catggccatc ggcgctcagt tggcagtcta gctcgatcat atcggcgccc gcggcaattg
     5161 cattctcaaa ggccaaccgg ctattttccg gatattgtcc cgaggcgccg cggtgggcaa
     5221 ttttcttgaa cgatggcatg gcgatagtct tagattgcta cgatcgaatt gttagccgct
     5281 ggcgcaaatt ttccgacagt ggctctagat cgtcgtgttc ggtaagcaaa cccaactcac
     5341 cacgaagttc acgaaggatt cggatgacca aatctccgaa cttcgtgcgc ttcgtgacct
     5401 cgtggtcaaa acgtcctttc ttctttggtt gccgctgcgc cgcgctcggt acagtcgcgt
     5461 gaaaattcaa accgtcgcga gtgaattcat tttgagatgg agcaaaaatt ctttgttgcc
     5521 cttgggtccc atgagcggcg attcggtaac ggccaggacc cgataaccgc agtcgaccgc
     5581 cgctagagat atttcatcga tgacccggcg atgctcttcc gccgagcgca ccacgccgcc
     5641 tttgccgact ttacccttac ccacttcgaa ctgtggcttg atcagcgcca cgacagtccc
     5701 ttctgaggca attagcgaat gtactttcgg caggatcaat ttgagcgaaa taaacgaggc
     5761 atcgatggtc gcgagtgtcg gaataaacgg cagaccgccc ggctccagat aacggatgtt
     5821 ggttttttcg agaaccacga cgcgcgagtc gttgcgcagt ttccaatcga gttggccata
     5881 accgacatcc accgcgatga ccttggcggc gccatgaacg agcagacaat cggtgaagcc
     5941 gccagtggaa gcaccgatgt cgatggcact tttgccggcg acctcaatgg caaactcgcg
     6001 cagcgccttc tccagtttga cgccgccgcg gctgacatag ggaggcgcgg ctataaccgt
     6061 gatcggcgcc gcgcggtcga tcaagttgcc cgctttggtg accggttgtc ggttgactag
     6121 aacctcgccg gcgagaatgc gccgccgccc ttcttcccgg ctcaccacca gttggcgttc
     6181 gaccaagagc aagtctaagc gctgcctctt tcccatccct ctctaatttt cttcttgcca
     6241 cggcgcatca tctgcaaggc cgcctgagcg atggcatctt tgtcgaagcc gcagattttc
     6301 ttgagttcgt cttgggtgcc atggggaatg aatcgatccg gcacaccgag ccgtttgaca
     6361 tccacaccgg caatgccgtc atccgcgaga aattccacca gcgcgctgcc gaaaccgccg
     6421 ctgatcgcat gatcttcgac agtgatgagc cgcggcactt tggtcagtag atcgcgaaac
     6481 aggtgttcat ccagcggttt gacgaagcgt gcattgacca ccgccgcgtt gatgcccagc
     6541 ggggccaaat cttgcgcggc tctaagtgcc ggaatcgccg tgttgccgat ggcagcgatg
     6601 accagatcgg tgccgtcgcg cagcagttcc gctttgccaa tcttcagact gtgcatccgt
     6661 tcgtcgagcg cgacattcca accttcaccg cgcggatagc gcaatgaaat cggccccgaa
     6721 tggtcgatgg cggtcttgag catatgctgc aactcgtttt cgtccttggg cgccatgatg
     6781 accatgttgg ggatcgaacg catataggcg aaatcgaaaa cgccatggtg cgttggaccg
     6841 tcggcaccga ccaaaccgcc gcggtcaagc gccagcacca catgaagatt ttgcaagcaa
     6901 acatcgtgga gaatctcgtc gtagccgcgc tgtagaaaag tcgaatagat cgccaccacc
     6961 ggcacataac cctcggtcgc cataccggcg gcgaacgtga ccgcatgctg ttcggcgatg
     7021 ccgacatcgt aggtgcgttc cggcaactcg cgctgcaact tatcgatacc ggtgccgctg
     7081 cccatagccg cggtgatgcc gacgatcttg ggattttcct tggccaggcg caccagcgct
     7141 tgaccgaaga tctcggtgta ggtgggcact gggcttttgt ctttttttgc cttgccggtg
     7201 agcacgtga
//
LOCUS       DATIRS010001057         1558 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_375466, whole genome shotgun sequence.
ACCESSION   DATIRS010001057 DATIRS010000000
VERSION     DATIRS010001057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1558
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_375466"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(184..654)
                     /locus_tag="VLM90_13435"
     CDS             complement(184..654)
                     /locus_tag="VLM90_13435"
                     /inference="COORDINATES: protein motif:HMM:NF013052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SET domain-containing protein-lysine
                     N-methyltransferase"
                     /protein_id="HSQ14024.1"
                     /translation="MKKNKTKKVLRRIVLRNSPIHGLGVFALRPIAKGTRIIEYKGKL
                     ITDREADRRFGRLHENSSHTMLFSVDDELVIDATRGGNSARWINHSCAPNCEIEEENH
                     RVFIEARRDIRPGEELAYDYNLQIGEKHTKKAKREHACLCGARRCRGTMLGEEE"
     gene            complement(684..>1558)
                     /locus_tag="VLM90_13440"
     CDS             complement(684..>1558)
                     /locus_tag="VLM90_13440"
                     /inference="COORDINATES: protein motif:HMM:NF015214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HSQ14025.1"
                     /translation="LATLAPISDEVIVYPNRPREPDEHDYAIAFAIPMNTKGLKILCR
                     DLYAEHADPERQPLTTRFDEVDAALIFDDVVVPWERVFVYKDPQLLSGIMYIHTWGQY
                     STMLRLVTKLEAFLGVAQLLTKYAKRNMLPPSQILLSSMIQDIEILRSCIQVGESRGY
                     RAEGGTWAPLLSTAYRVHSIEASDRAERTMEGLLTSTLMLSGGASDLNSSDIGPFVER
                     YFRGGAPDTKEHLRLMAVAADMVMTPFGKRSQLYERLQSGEVDRMRQRLYGQYQDPAP
                     AERMMQFVKSMDKD"
BASE COUNT          304 a          460 c          445 g          349 t
ORIGIN      
        1 cgtcgatgac ggtgatcttc attgcgcaaa gatgggttga gcctatcggc caaagccgag
       61 cggcgagaca aattcatttt cacgacgaag cccacgaagg gttcggataa tttaacctcc
      121 gagcttcgtg ttctgcgtgt ccttcgtggt gagaatccgg ttaacgcttt cgttgcagtt
      181 aattcactct tcctcgccga gcatcgtgcc gcggcagcgc ctggcgccgc acaggcaggc
      241 atgctcccgt ttggctttct tggtgtgctt ttcgccgatc tgcaggttgt aatcgtaggc
      301 cagctcttcg cccggccgga tatcgcgccg cgcttcgata aatacccgat gattttcttc
      361 ctcgatctcg cagttgggcg cgcacgaatg attgatccag cgcgccgaat ttcccccgcg
      421 ggtggcgtcg atcaccaact catcgtcaac cgaaaacagc atcgtgtgcg aagaattttc
      481 atgaagccgg ccaaaacggc ggtcggcttc tctgtccgtg atcaacttgc ctttgtactc
      541 gatgatccgc gtgcccttgg caatcggccg cagggcgaac acgccgaggc catggatcgg
      601 cgagttgcgc aagacgatgc gccgaagaac ttttttagtc ttattttttt tcatcttcca
      661 aacttttccc cgcgccaaca cgcttagtcc ttgtccatcg atttgacgaa ttgcatcatg
      721 cgctcggccg gcgccgggtc ttgatattga ccgtagagcc gttgacgcat gcggtcgacc
      781 tcgccgctct ggaggcgttc gtagagctgg ctgcgcttgc cgaacggcgt catgaccata
      841 tccgccgcca ccgccatcag gcgcaggtgc tctttggtat ccggcgcgcc gccgcggaag
      901 tagcgctcga cgaacggccc gatatcggaa ctgttcaagt ccgacgcgcc gccgctcaac
      961 atcagcgtgc ttgtgagcaa cccctccatg gtacgctcgg cgcgatccga cgcttcgatg
     1021 ctatgcaccc ggtaggccgt gctcaagagc ggcgcccagg tgccgccttc ggcccgatag
     1081 ccgcgcgact cgccgacttg aatgcacgag cgcagaatct cgatgtcttg aatcatgctc
     1141 gataggagaa tctgtgacgg cggcagcatg ttgcgtttgg cgtacttggt gagcagttgg
     1201 gcgacgccga gaaacgcttc gagcttggtc accaagcgca gcatggtcga gtactgcccc
     1261 caggtgtgaa tgtacatgat tcctgaaagc agctgcggat ctttataaac gaacacccgt
     1321 tcccagggca cgacgacatc gtcgaagatc aaagcagcgt cgacctcgtc aaaacgcgtg
     1381 gtcagcggct ggcgctcggg atcggcatgt tcggcgtaaa gatcgcggca gagaattttc
     1441 aatcccttgg tgttcatcgg gatcgcaaag gcgatggcgt aatcatgctc atcaggttcc
     1501 cgcggccggt tcggatagac aatcacctcg tcggagatcg gcgccaaggt cgccaaag
//
LOCUS       DATIRS010001058         1666 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_965318, whole genome shotgun sequence.
ACCESSION   DATIRS010001058 DATIRS010000000
VERSION     DATIRS010001058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1666)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1666)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1666
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_965318"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..711
                     /locus_tag="VLM90_13445"
     CDS             <1..711
                     /locus_tag="VLM90_13445"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase family protein"
                     /protein_id="HSQ14026.1"
                     /translation="CTEKGVVVSAGGSGNPNATAELTWGLILSSLRSLPREVTGLQNG
                     GWQSTLGIGVSGKTIGIYAYGKIGSIVAGVGKAFGARVICWGREGSTGRAKAAGFEVA
                     KSREEFFAEADIVSFHLPLNKDTRGIITSNDLARMKPSALLVNASRSGLIAKGALVEA
                     LKAGRPGFAAVDVYDKEPVGADEPLTKMANVTCTPHLGYVTRESYEEYYATVVDDIVS
                     FAAGKPSHVLNPDALGKK"
     gene            786..1460
                     /locus_tag="VLM90_13450"
     CDS             786..1460
                     /locus_tag="VLM90_13450"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSQ14027.1"
                     /translation="MRILVVEDDKKIASFIVKGLEEAGFAVDRADNGDGALHLALSEP
                     YDAAVMDIMLPKLDGLSVIERLRQAKIPTPVLILSAKRSVDDRVKGLQTGGDDYLTKP
                     FSFAELLARVQALIRRAGHETAPTRLAAGDLSLDLLTREVKRGETKLDLQPREFALLE
                     YLMRNAGKVVSKTMILEHVWGYDFDPMTNVVDVLVSRLRAKLDRDFDGKLIQTHRGVG
                     YALKSQ"
     gene            1441..>1666
                     /locus_tag="VLM90_13455"
     CDS             1441..>1666
                     /locus_tag="VLM90_13455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14028.1"
                     /translation="MRLRVSSSFHRTLGFRLTAWYSGIFIVSSLVLFSVSYLFLFSSM
                     RDRRGETQSQLRKYVDLVEAGGVSGLANEFA"
BASE COUNT          319 a          455 c          525 g          367 t
ORIGIN      
        1 tgcaccgaga agggcgtcgt ggtttcggcg ggcggctcgg gcaatcccaa cgcgaccgcg
       61 gaactcacct ggggcttgat cctttcgtct ctgcgtagtt tgccgcgcga ggtaaccggt
      121 ttgcagaacg gcggctggca gtcgacgttg ggtatcggcg tcagtggcaa gaccatcggc
      181 atctacgcct acggtaagat cggcagtatc gttgctggtg tgggaaaggc cttcggcgcg
      241 cgggtgattt gctgggggcg cgaaggttcg acaggccggg cgaaagccgc cgggttcgaa
      301 gtcgccaaga gccgcgagga gttcttcgcc gaggcggata tcgtgagctt tcatctgccg
      361 ctcaacaagg acacccgcgg catcattacc agtaatgatt tggcgcgcat gaagccgagc
      421 gcattgttgg tcaacgcgag ccgttccggg ttgatcgcca agggcgcgtt ggtcgaggcg
      481 ttgaaggccg ggcggccggg cttcgccgct gtcgacgttt acgataaaga gccggttggc
      541 gcggacgagc cattgacgaa aatggccaac gtcacctgca cgccgcatct gggttacgtc
      601 acccgtgaaa gttatgaaga gtattatgcg acggtcgttg acgacatcgt cagcttcgcc
      661 gccggcaagc cgagccatgt gttgaatccg gatgcgctgg gcaaaaaatg atttcgccag
      721 cgccgttgag ttctctatcg gtttacgcgt tagtagatcg gtgaagagaa tgtcgcgcta
      781 aaccgatgcg catcctagtt gtcgaagacg acaagaaaat tgcttcattc attgtcaaag
      841 gcttggaaga agcgggcttc gcagtcgacc gtgccgataa tggcgacggg gcgcttcatc
      901 tggcgctgtc cgagccctat gacgcagcgg tcatggatat catgctgccc aagcttgacg
      961 gcttgagcgt gatcgagcgg ctgcggcaag cgaagattcc tacgccggtg ttgatcttga
     1021 gcgccaagcg tagcgtcgac gatcgagtta aaggcttgca gaccggcggc gacgattacc
     1081 tgactaaacc gttttccttc gctgagctgt tggcccgcgt gcaagcattg atccgccgag
     1141 ccggccacga gaccgcgccg actcggctcg ctgccggtga tctgtccctc gacttgctca
     1201 cccgtgaggt caagcgcggc gaaaccaaac tcgatttaca gccgcgcgag ttcgccttgc
     1261 tcgaatatct catgcgcaat gccggcaagg tggtgtcgaa aacgatgatt ctcgaacatg
     1321 tctggggtta cgatttcgac ccgatgacca acgtcgtcga tgtgctggta tcgcgcttgc
     1381 gcgccaaact cgatcgcgat ttcgacggca agctgatcca gacgcaccgg ggtgtcggct
     1441 atgcgcttaa gagtcagtag ctcctttcac cggaccctcg gttttcgcct gacggcatgg
     1501 tactcgggaa tctttatcgt cagttcctta gtcctgttct cggtatccta tttgttcttg
     1561 ttctcgtcca tgcgcgaccg gcgcggcgag actcagtctc agctgcgcaa atatgtggat
     1621 ttggtcgagg ccggaggcgt ctcggggctg gccaatgagt ttgcca
//
LOCUS       DATIRS010001059         2045 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_867516, whole genome shotgun sequence.
ACCESSION   DATIRS010001059 DATIRS010000000
VERSION     DATIRS010001059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2045
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_867516"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1351)
                     /locus_tag="VLM90_13460"
     CDS             complement(<1..1351)
                     /locus_tag="VLM90_13460"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ14029.1"
                     /translation="MKTLIQGGWVVGFDGNEHEIIKDGVVVYDGNRIEFVGKDYPQPV
                     DKRIDAKGCLVSPGFIDTHFHSGINASDYILADSTKTDFFASNYLAHGGPTREGAHSA
                     HLKDVDIGQRFSIIHVLKSGVTTTFDIGGAGGEPARYVDMIDQVGIRCVAGPSYKNVS
                     FFHDKAGRLEYDWNDERGSKGLQAAVDFAKKFNGACSGRMTAMLFPGHVDSCTPALLK
                     ETKIAAKDAGVGIQIHATINLFEFHTVMQRERCTPIELLKKLGFLAPDVSLSHCIFVS
                     GHSWLAYPYGDDLKIIADSGSSVAYSPLKYLKLGILMESFDRYRKAGINMGIGTDTFP
                     KDILSDMRYAGIASRIADKSFLAGQPRDVFNSITLGGAKMIGRDDIGRLAKGAKADIA
                     IVNLRDIAFGAVHDPIRSLMETAVSRDVRTVIVDGETLVDNGKYLRLDEQELLDKVQS
                     "
     gene            complement(1524..>2045)
                     /locus_tag="VLM90_13465"
     CDS             complement(1524..>2045)
                     /locus_tag="VLM90_13465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14030.1"
                     /translation="SQSERFQAMRMNIVQAIVITPPLDVRAKNEGFNVLYRLVDLGVP
                     FIYSSVHANGRMLRDRPDMVQRVVAAFAEAVHFVEKNPDKAKAAVAKVMRTNDAEALQ
                     SSYDVYAKEIVDRRMIIPEKAVADTIEQTRLAGGVVRRKSDDLFDNSFAIHLEKSGFL
                     KELWGSELGAPAR"
BASE COUNT          437 a          568 c          597 g          443 t
ORIGIN      
        1 tagactgaac tttgtcgagc aactcctgtt cgtctaagcg caagtatttg ccgttgtcga
       61 ccaaagtctc gccgtcgacg atgaccgtgc gcacgtcgcg gctcaccgca gtttccatca
      121 acgaacggat cggatcgtgc acggcgccga aggcaatgtc gcgcagattg acaatggcga
      181 tgtcggcttt ggcgcctttc gctagccggc cgatgtcgtc gcggccgatc atcttggcgc
      241 cgccgagggt gatggaattg aagacatcgc gcggctgacc ggcgagaaaa ctcttgtcgg
      301 cgatgcgcga ggcgataccg gcgtagcgca tgtcggagag aatgtctttg gggaaagtgt
      361 ccgtgccgat gcccatgttg atgccggcct tgcggtagcg gtcgaaggat tccatgagaa
      421 tgcccagctt caaatattta agcgggctat aggctaccga cgagcccgag tcggcgatga
      481 ttttaagatc gtcaccatag ggataggcga gccagctatg gccgctgaca aagatgcagt
      541 gcgacaatga aacatcaggc gcgaggaagc cgagcttttt taatagctcg atcggggtgc
      601 agcgttcgcg ctgcatgacc gtgtggaact cgaacagatt gatcgtcgca tgaatctgaa
      661 tgccgacgcc ggcatccttg gcggcgattt tggtttcctt cagcaacgcc ggcgtgcacg
      721 agtcgacatg gccgggaaat aacatcgccg tcatgcggcc gctgcacgca ccgttgaact
      781 ttttggcgaa gtccaccgcg gcctggagcc ctttgctgcc gcgttcgtcg ttccaatcat
      841 attcgagccg gcccgcttta tcgtgaaaaa aggaaacgtt cttgtagctc ggaccggcga
      901 cgcagcgaat accgacctga tcgatcatgt cgacatagcg cgccggctca ccgccggcgc
      961 cgccgatgtc gaaggtcgtg gtcacgccgc tcttcaaaac gtgaataata gaaaaccgct
     1021 ggccgatgtc gacgtctttc aaatgcgccg agtgcgcgcc ctcgcgggtc ggcccgccgt
     1081 gagcaagata attcgacgca aagaaatcgg tcttggtcga gtccgcgaga atgtagtcgc
     1141 tggcattgat gccggagtga aagtgagtgt cgatgaatcc aggcgaaacc aagcagcctt
     1201 ttgcatcgat ccgcttgtcg accggttgtg gataatcttt gccgacgaat tcgatgcgat
     1261 tgccatcgta aacgaccacg ccgtctttga tgatttcatg ttcgttgccg tcgaagccga
     1321 caacccagcc gccttggata agtgttttca ttgcccgtgc ctttcggaga ttgcagtgcg
     1381 aatcagtggc aggactaaca aaagaagaat cttaagacaa gccgcaagcg gaaagcccgt
     1441 ttgtcattac gcccagagga agcattcttt ttttcgcgga gtcgagtcaa tcgcgagcga
     1501 ttgttgcggg taaaaaaaat cgctcaccgt gccggcgcgc ccaactcgct gccccacagc
     1561 tccttgagga agccgctttt ttccaagtga atagcgaaac tgttgtcgaa aagatcatcc
     1621 gacttgcgcc gcacgacacc gccggccaga cgggtttgct cgatggtatc ggccacggct
     1681 ttttcaggaa tgatcatgcg ccggtcgacg atctccttgg catagacgtc gtaagatgac
     1741 tgcaacgctt cggcgtcgtt ggtgcgcatc actttggcca ccgcggcctt agccttgtcg
     1801 gggttttttt caacgaagtg aaccgcttcg gcaaacgccg ccaccacccg ctgcaccatg
     1861 tccgggcgat cgcgcagcat ccgcccgttg gcgtgcaccg agctgtagat aaacggcacg
     1921 ccgagatcga ctaggcggta gagaacattg aacccttcgt tcttcgcgcg cacgtcgaga
     1981 ggcggagtga tcacgatcgc ctgcacgatg ttcatgcgca tggcttggaa gcgctccgat
     2041 tggct
//
LOCUS       DATIRS010001060         1773 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_79994, whole genome shotgun sequence.
ACCESSION   DATIRS010001060 DATIRS010000000
VERSION     DATIRS010001060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1773
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79994"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            18..1055
                     /locus_tag="VLM90_13470"
                     /pseudo
     CDS             18..1055
                     /locus_tag="VLM90_13470"
                     /inference="COORDINATES: protein motif:HMM:NF027651.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis CcmF C-terminal
                     domain-containing protein"
     gene            1118..1684
                     /locus_tag="VLM90_13475"
     CDS             1118..1684
                     /locus_tag="VLM90_13475"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HSQ14031.1"
                     /translation="MPVRRLTITLLIIAPILALLAYGFTRDAKYIKSPLLAKPATPFS
                     VTLYDGRKVTLEDYRGKALFLNFWASWCAPCRAEARDLEAAWQKIKDKDMVFLGVALQ
                     DLDDNAKAFLQEFNVTYPNGRDESAKIAVDYGTWGIPESFFIDPQGRITYKHVGAIRA
                     ALVLTKLEEAAKGIASAQEGRGDYQGVR"
BASE COUNT          329 a          553 c          466 g          425 t
ORIGIN      
        1 ctttttcatc gggcccggtg ggcggctttt ttctgggctt tctcgcgttc atcctattgg
       61 gctccttcgg cctgctcgcc taccgcgccg atcttttgaa ggaacagccc gagctcgact
      121 ccatggtcag ccgcgagtcg gccttcttgc tcaacaacat cgtgttggtc tccgctttgt
      181 tcacgatctt tctcggcacg atctttccgc tgatctccga agccgtcgcc ggcactcagg
      241 tgagcgttgg cgcgccctat ttcaactagg tcaccgtgcc gttgtttctc gtcctagtat
      301 ttctcatggg ggtcggaccg atgatcgcct ggcggcgcgc ctcctgggat aatcttagac
      361 ggaactttct ctggcccgcc gcgacctcgc taagcttcgg tttgttgcta tttctttgga
      421 aggtgaaaga ttttctgccg ctgttgggct ttaccctgct cgccttcgtc gtttcctcga
      481 tgctctatga caccgctctc gcgctgcgcg cccgcaagcg cattgccggc gaaggcatcc
      541 tgcgcggcct gattaccctg acccggcgca accaacggcg ctacggcggc ctggtggtcc
      601 atctcggcgt ggtcttgatc atgatgggca tcgccggctc gatgacctac agcagtgaaa
      661 aagacgctac cctcgcggtc ggacaatccc tcgatatcgg caactacaag gtgcaattcg
      721 aagggctcaa gggctcgcag cagccgaccc atttccgcgt cgaaggagtc tttcgcgtgt
      781 ttcacaatgg cagcgacgaa ggcatcgtta ccccggcgct aaaattcttc ccaacccagc
      841 aatcgcccat cggccgcgcc gtccatcaga gcagcttgag cgaagatatt tatttaatcc
      901 tctccggctt cagcgaagtg gaccgcaacc aagccacgct caaagtcctg gttcgcccgc
      961 tggtgatctg gatgtggatc ggcggtttcg tcatcgcctt cggcacaatc atctgcctgg
     1021 tccccatggg cacagtgaaa gcgcgagaag attgaccatg cccgccccac agtttgtctg
     1081 taatttgtaa tcttgaattt gtaatttgga attgcccatg cccgtacgtc gcttaaccat
     1141 caccctgctg atcattgccc cgatcctggc gctgttggcc tacggcttca cccgcgacgc
     1201 caagtacatc aagtcgccgc tgctggccaa acccgcgacg ccattctcgg tcacccttta
     1261 tgacggcagg aaggttacgc tggaagatta ccgcggcaag gcgctgtttt taaatttttg
     1321 ggcgtcctgg tgtgcgccct gccgcgccga agcccgtgat ctcgaagccg cctggcaaaa
     1381 gatcaaagac aaggacatgg tctttctcgg tgtcgctttg caggatctcg acgataacgc
     1441 caaagccttt ttgcaagaat tcaacgtcac ctatcccaat ggccgcgacg agtccgccaa
     1501 gatcgctgtc gactacggga catggggaat ccctgaaagt tttttcatcg acccgcaggg
     1561 ccgcatcacc tacaagcatg tcggcgccat tcgcgctgcg ctggtattga ccaagctcga
     1621 agaagcggcc aaaggcatcg ccagcgccca agaagggcgc ggcgattatc agggagtgcg
     1681 ctgacggcga tgcgctattt taaattattt gtcgtttacg cctttttgca tctcgcctca
     1741 ccgccgctcc acgccgcgac aaccgccgat atc
//
LOCUS       DATIRS010001061         2238 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1947430, whole genome shotgun sequence.
ACCESSION   DATIRS010001061 DATIRS010000000
VERSION     DATIRS010001061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2238
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1947430"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            255..638
                     /locus_tag="VLM90_13480"
     CDS             255..638
                     /locus_tag="VLM90_13480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14032.1"
                     /translation="MKVFLALSLVVLGGCVQARDPQLLAMKHAGDSALTCEQIAVEFK
                     SNTEVAQNKITTNRANDRRELLLGIFVWPGLFELKNPDGNEANALLDRNIYLREVAKG
                     KSCAAMESWPGQPERYTMNDFPATL"
     gene            704..1444
                     /locus_tag="VLM90_13485"
     CDS             704..1444
                     /locus_tag="VLM90_13485"
                     /inference="COORDINATES: protein motif:HMM:NF025100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase chain length factor"
                     /protein_id="HSQ14033.1"
                     /translation="MANGGIRFSIAAHAAWAPGVETPEAWGDWAAGRREIGGDAEPAL
                     RAMAPMLRRRAGVLDRMALEVAYRCLGDRRDVPAIFCSRHGEASRSVELLIDLAKELP
                     LSPTMFGLSVHNATGGLFSIARGDHAGSSALAAGSSSVEHAAIEASGLLADGAAEVLL
                     VVYDRPLPALYAAYQDCHEQPFAWAWLMQPPGSDVVSLSWSKAEGHEAMSSERYSPGL
                     EILRFYLRRDRSLDRICQRRRWRWSWDA"
     gene            1437..2207
                     /locus_tag="VLM90_13490"
     CDS             1437..2207
                     /locus_tag="VLM90_13490"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HSQ14034.1"
                     /translation="MLKRIEWCWRVFGVALSFIAIGIGGLVIFPLLHLFIWQRQRRQA
                     VARDLIRLAFLGIVHSMCAFGVFQYQASGLARLDRHGLLILANHPTLIDIVFLMAFVP
                     RADCIVKQGLWRNPFTRATVSAAGYICNRGDSVDLIDDCVAAVRGGGNLIIFPEGTRT
                     PADGSISLKRGAANIAVRAPCDITPVVVRCAPPMLVKSEPWWRLPAQTSQFRFDVMED
                     VAIGPFVEGAANAALAARRMTAHLRQVFAQEGGDRASN"
BASE COUNT          414 a          607 c          712 g          505 t
ORIGIN      
        1 tatagtggag cgttcaagtt cagagacgcg gtgagcttga ctgcatagca tcgtccccca
       61 aaagtttgcg ggtgccggga tgcgtcgggt tggattgaac actatttaaa aaactcagtt
      121 gtaccatgag gcgagttcga actattattg gcaataattt agcaagtgtc gtgacgcgga
      181 tggtgacggc gttctcgggc cagagccgca gacgaaacgc aaacaataac ctcggataat
      241 cactaggagc tgatatgaaa gtttttttgg cattgtcgtt agtcgttctc gggggatgcg
      301 tccaagcgcg cgatccgcaa ttgctcgcca tgaagcacgc cggtgatagt gcactgacct
      361 gcgagcagat cgccgtggag ttcaaatcga acaccgaagt ggcgcagaat aaaatcacca
      421 cgaaccgggc gaatgatcgg cgcgaattac ttttgggaat tttcgtctgg ccggggctgt
      481 tcgaactaaa aaacccggat ggcaatgagg ctaatgcatt gctcgaccgc aatatttacc
      541 tgcgggaagt cgccaaggga aaatcttgcg ccgccatgga aagctggccg gggcagccgg
      601 agcgctatac gatgaacgat ttcccggcga cgctatgaac gacgtctctt cgcgttgcgg
      661 tcaccaggcc caagggtaac cgcggtttta ggatttaacg aacttggcaa acggcgggat
      721 tagattttcg atcgcagcgc atgcggcctg ggcgccggga gttgaaactc cggaggcttg
      781 gggcgactgg gcggcgggtc gacgggagat tggcggcgac gccgagccgg ctctgcgggc
      841 gatggcgccg atgctgcgcc ggcgcgctgg tgtactcgac cgcatggcgc tggaagtcgc
      901 ttaccgatgt cttggcgatc gccgcgatgt gccggcgatc ttttgctcgc gtcatggcga
      961 ggcttcgcgg tcggtggagc tgttgattga tttggcgaaa gaactaccgc tttcgccgac
     1021 catgtttgga ttgtcggtgc ataatgccac cggtggctta ttctcgatcg cccgcggcga
     1081 tcatgccggc agcagcgccc tagccgcggg ttccagcagc gtggaacatg cggcgatcga
     1141 ggcttccgga ctgcttgccg atggcgccgc cgaggtcttg ctggtggtct acgatcggcc
     1201 gctgccggcg ctctatgcgg catatcagga ttgtcatgaa caacccttcg cctgggcctg
     1261 gttgatgcaa ccgccgggca gcgatgtcgt ttcgctttcc tggtctaagg cagaaggcca
     1321 tgaagccatg agcagcgaac gttattctcc cggtctggag atcttgcgct tttatttgcg
     1381 ccgagaccgt tctctggatc gcatctgcca gcgacggcgc tggcgctggt cctgggatgc
     1441 ttaagcgtat cgagtggtgc tggcgggtgt tcggcgtcgc cctgagcttt atcgccatcg
     1501 gcatcggtgg gctggtgatt tttccgttgc ttcatctctt catttggcag cgccaacggc
     1561 gccaagccgt ggcccgcgac ctgatccgcc ttgccttcct cggcatcgtt cattcgatgt
     1621 gtgcctttgg cgttttccag tatcaagcca gtggtttggc acggctcgac cgccatgggc
     1681 tgctgatcct tgccaaccat cccacattga tcgatattgt cttcctgatg gcgtttgtgc
     1741 cgcgggccga ttgtatcgtg aaacaagggc tttggcgtaa cccgttcacc cgggcgacgg
     1801 ttagcgccgc aggctatatt tgtaaccgcg gcgacagcgt tgatctgatc gacgactgcg
     1861 tcgcggcagt gcgcggcggc ggtaacctga ttatttttcc ggaaggcacg cgcacgccgg
     1921 ccgacggctc gatcagtctt aaacggggcg cggcgaacat cgccgtgcgc gcgccctgcg
     1981 acatcacgcc tgtggtggtg cgctgcgcgc cgccgatgtt ggtcaagagc gaaccctggt
     2041 ggcgcttgcc ggcgcaaacc tcgcagtttc gcttcgacgt gatggaagat gtcgccatcg
     2101 gtccgtttgt cgaaggcgcc gccaatgcag cgctcgcggc gcgccggatg accgcgcacc
     2161 tgcgccaggt ttttgctcag gaaggtggag accgtgcgag taactgaaga agatatcaag
     2221 caactgatta ttgatgtt
//
LOCUS       DATIRS010001062         3324 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_277201, whole genome shotgun sequence.
ACCESSION   DATIRS010001062 DATIRS010000000
VERSION     DATIRS010001062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3324)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3324)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3324
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_277201"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..915)
                     /locus_tag="VLM90_13495"
     CDS             complement(<1..915)
                     /locus_tag="VLM90_13495"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ14035.1"
                     /translation="MADLLQVRNLETSFFTPEGQVRAIDGISFEIGEGKTLGLVGESG
                     CGKSVTSLSIMRLIPSPPGKIVGGEILYRGRDLLKLNNEEMRKIRGNEISMIFQEPMT
                     SLNPVFTVGNQIGEAIHLHQGLGKKETRQKTIEMLRLVKIADPQSRVDSYPHQLSGGM
                     RQRVMIAMALSCNPSLLIADEPTTALDVTIQAQILELMKELQEKIGMALLLITHDLGV
                     VAEQADDVAIMYAGKIVERSNTRAIFNRPFHPYTVGLLNSLPNVGGKKKKRLDAIPGV
                     VPSPLNLPSGCRFRDRCPKAADLCAQSEP"
     gene            1280..2374
                     /locus_tag="VLM90_13500"
     CDS             1280..2374
                     /locus_tag="VLM90_13500"
                     /inference="COORDINATES: protein motif:HMM:NF018234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSQ14036.1"
                     /translation="MGRVKNLDEIKAMVRERTGKRNTFRLAKKEDVESVLANLTRKDP
                     ELWAKEWSRVAKPYEEAGVKLEQAGKFQEARAAYVQAYAYYATGRYPTPHTPGKMACF
                     RQSLELYEKAGKYFDPPLERIEVPFGDSKIPIYVRVPQDGQRHSICINFGGIDSFKAE
                     SYEYDEGLQKAGIASCSMDMPGVGECPIKASPTADSIFTAVINYLETRGDVDPKRIAI
                     MGRSFGGYWAAKMAHVEAKRLRAAIVWGGGVHYFFQNDWLRESTNAESYLMDHDIARC
                     RLFGVDSIDELFKPWSELSLKDQGWLDKPSCPMLIVNGKNDLQTPIDDLYILLEYGAP
                     KGARVFPGGHMGQTPQTFPTIVHWLKIELS"
     gene            2552..>3324
                     /locus_tag="VLM90_13505"
     CDS             2552..>3324
                     /locus_tag="VLM90_13505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14037.1"
                     /translation="MRRSAEITPGNIKRAKQVLDQNTPRRFQASASQSVTISQQDLDL
                     VANYLAHFYANGSARVILLNDKAEVTASIRPPQVPLIFYFNLTGVLREGAPMPRFQQL
                     SVGRVMIPGSIADWLAGRALSQLLGQEALDAIAQTIKQVDVRNGQLAIAYERPVNLRA
                     KLPRAMLSAEDQARLRVYQERLVLISSGSKGKSIPLTELLVALFELAEIRAKEGNPAA
                     ENRAAILVLAFYIHGKSLEAILPAASDWPRPSEQTVTLNG"
BASE COUNT          724 a          946 c          954 g          700 t
ORIGIN      
        1 gggttcgctc tgagcgcaaa gatcggccgc tttcgggcag cggtcgcgga agcggcagcc
       61 gctcggtaaa ttaagcgggc tcggcaccac gccgggaatc gcgtccagcc gctttttttt
      121 cttgccgcca acgttgggca gcgagttcaa caagccgaca gtataggggt gaaacggccg
      181 gttgaagatt gcccgcgtat tcgagcgttc gacgatcttg ccggcgtaca tgatcgccac
      241 gtcgtcggcc tgctcggcga ctacacccag gtcatgggtg atcagcaaaa gggccatgcc
      301 gatcttttct tgcagttcct tcatcagctc aagaatctgc gcttggatcg ttacgtcaag
      361 agccgtggtc ggttcgtcgg cgatcaggag actcggattg cacgacaacg ccatggcaat
      421 cataacgcgc tggcgcatgc cgccgctcaa ctggtgcggg tatgagtcga cgcgggactg
      481 cgggtcggcg atcttgacca ggcgcagcat ctcgatggtt ttctgccggg tttctttctt
      541 gcccaggccc tgatgcagat ggatggcttc gccgatctgg ttgccgacgg tgaacaccgg
      601 attgagcgag gtcatcggct cctggaagat catcgagatc tcgttgccgc ggatcttgcg
      661 catctcctcg ttgttgagct tcaaaagatc gcgcccgcgg taaagaatct ccccgccgac
      721 gatctttccc ggcggtgacg gaatcaagcg catgatcgac agcgaggtga cactcttgcc
      781 acagcccgac tcgccgacca agccgagcgt cttgccttcg cctatctcga agctgatgcc
      841 gtcgatggcg cgcacttgcc cttccggggt aaagaaagaa gtctcgaggt ttctgacctg
      901 cagtaaatca gccatgatcg tagcaataaa gcgaaatgct tctcggcggt ccggcctcct
      961 cttccggctc agcctccgcg actccagaag ctcgcggata gcatctccca tagcattaat
     1021 tcccagcagt gccaatatcg agtgaaattt tagccagatt accgataccc ggtaggcttc
     1081 aacgcgagcg cgtaaggcgg ccgcggtttc tcatgctttg gcgaatttcg cgtgcgcacg
     1141 cggaattttg gccaacgcca ctttgcgctt gcagttgatg acccggtaga gtagacgacc
     1201 gtgcaataac gggtcactag aaaacccttc taacggctgg aactatttga acgattgcac
     1261 gactccgcag gaggtattca tgggccgggt aaaaaacttg gatgagatca aggcgatggt
     1321 gcgagagcgc accggcaagc gcaacacttt tcgccttgcc aagaaggaag acgtggaatc
     1381 cgtgctcgcc aatctgacga ggaaagatcc cgagctttgg gccaaggagt ggtcgcgcgt
     1441 ggcgaagccc tatgaagaag cgggtgtaaa gctcgaacag gcgggcaaat tccaagaggc
     1501 gcgcgccgcc tatgtgcagg cctacgctta ttacgccacc ggacgctacc cgacgccgca
     1561 cacgccggga aagatggcat gctttcgtca aagtctcgaa ttgtacgaga aggccggcaa
     1621 atatttcgac ccgccccttg agcgaatcga ggtccccttc ggcgacagca agatcccgat
     1681 ctacgtgcgc gtgccccaag acggacaaag acattcgatc tgcattaact tcggcggcat
     1741 cgattcgttt aaggcggaaa gttacgaata cgacgaaggc ctgcagaaag ccgggatagc
     1801 gtcctgttcg atggatatgc ccggcgtcgg cgaatgtccg atcaaagcat cgccgaccgc
     1861 cgactcgatc ttcacggcgg tgattaatta tctagagact cgtggcgatg tcgatcccaa
     1921 gcgcatcgcc atcatgggac ggagcttcgg cggttattgg gccgccaaga tggcccacgt
     1981 cgaagccaag cgtctgcgcg ccgccatcgt ctggggcggc ggtgtgcatt attttttcca
     2041 gaatgattgg ttgcgcgagt cgaccaacgc cgaaagttat ttgatggatc acgatatcgc
     2101 ccgctgccgg cttttcggcg tcgacagcat cgacgaactc ttcaaaccct ggtccgagct
     2161 atctttgaag gaccagggct ggttggacaa accctcatgt cccatgctga tcgtcaacgg
     2221 caaaaatgat ctgcaaacac ccatcgacga tctttacatc ctcttagaat atggcgcgcc
     2281 aaaaggcgcg cgggtttttc ccggcggcca catgggtcag acgccgcaga cgtttccgac
     2341 catcgtgcat tggttgaaga tagagttaag ttaaaccaac gcttcggcgc cgagaaattt
     2401 cccttgtccg atggattttc cgtgtagcat ggcgtaattt atcgtgcgtc ccgtcatgcg
     2461 ctttctactt aaggttctat tcttattcgc attagcaatt cccctggcag ttgcggttac
     2521 gctctatctg gctatcgacg gggagccgaa ggtgcgccgt tccgccgaga tcacgccggg
     2581 taacatcaaa cgggccaaac aagttctcga ccaaaacacg ccacgccggt tccaggcgag
     2641 cgctagccag tcggtaacga tcagccagca agacctcgat ctggtcgcca attatctggc
     2701 ccatttttac gccaacggca gcgctcgagt gatcttgtta aacgataaag cggaagtaac
     2761 cgcgagcata cgcccgcccc aggttccgct gatcttctat ttcaatctga ccggggtcct
     2821 gagggaaggc gcgccgatgc cgagattcca gcaactcagc gttgggcggg tgatgattcc
     2881 cggatctatc gcggattggt tggctgggcg ggcgctatcg cagttgctgg gtcaagaggc
     2941 gctcgacgca atcgcccaga cgatcaagca agtcgatgtc agaaacggcc agctcgcgat
     3001 cgcctacgag cggccggtca atctgcgagc caagctgccg cgcgccatgc tctccgccga
     3061 agatcaagca cggctgcgcg tttatcaaga gcgcctggtg ctgatcagta gcggatcgaa
     3121 aggcaaaagc attccattga cggaattgtt ggtggcgctg tttgagcttg ccgaaattcg
     3181 tgcaaaagaa ggcaatccgg cggcggaaaa ccgcgccgcc attctagtac tcgcgtttta
     3241 catccacggc aaatcgctgg aagcaatttt acccgccgcc agcgattggc cgcgcccgag
     3301 cgaacagacg gtgacgctca atgg
//
LOCUS       DATIRS010001063         2827 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1359265, whole genome shotgun sequence.
ACCESSION   DATIRS010001063 DATIRS010000000
VERSION     DATIRS010001063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2827
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1359265"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            300..626
                     /locus_tag="VLM90_13510"
     CDS             300..626
                     /locus_tag="VLM90_13510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14038.1"
                     /translation="MSYTAVVILSLLIIGCSSSNNGAFAARSGREAQQNERAAIVERL
                     IPEEGALPENRLKDVLAAISMVDKGFEMENPTRERVRRHLLDREVTTLRRIETNVRAI
                     ERKRRD"
     gene            complement(730..>2827)
                     /locus_tag="VLM90_13515"
     CDS             complement(730..>2827)
                     /locus_tag="VLM90_13515"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSQ14039.1"
                     /translation="HARIVRVDGSKAAKVPGVKAILTGADVRGLLIGKQIRDLPVLCW
                     DKVRFIGDRVAAVAAETVDGAEEAIQLIDVDYEILPAVFDPLEAMAPGAPQIHDNVAE
                     YDGAPKNILAADLRNGLTRLAWKKGDIEQGFRDADLVFEHTFNVPARHQGYLEPHAAT
                     VAIEPDGRVQVWAGVKNPFGVRSQLSKCLGLAEERIRMNVVNVGGEFGGKGDGVDLPI
                     LYFLAQKTGRPVKFIMTYAEELSASNPAHPTVITIKSGVMRDGRLVARQMRAVHASGG
                     YGALKSNTSLATWHYAGGQYSIEHADIEFMQIYTNTVPGGYYRSPGAVATAFAVDCHT
                     DIIAKELAIDAAEFRLKNFLSDGEADAVGQELKDVRFREVLQGALDAAGWKKPKKANH
                     GRGIALSGRHISGGDTGVILSAEADGGYLIVSPSIDQGSGTHTILRQLVADRMKIGID
                     HVRVVIGDTDTAPRDGGMRASRMTYVAGNAMIKACDELRDKLLAQAARILECRAEDVD
                     FDGGKFALRQDPGQQVLLRRVVAQTAEPLLVTVYEDYRAPDEFSYICAQVAEVEVDPE
                     TGAVKLHRFVTAHDVGTIINPLTHQGQIDGAAVMGVGQGLMEEIVIDQGKVTNNNLGD
                     YKLPSIADLFELKTVLVTSGGGVGPHNAKPIGEFANNAPPAAIANAIADAVGVRLFNL
                     PLSAETIYRALRVQQQ"
BASE COUNT          552 a          857 c          832 g          586 t
ORIGIN      
        1 cgtgatccca tgtcgtaagc atgccacggc tgtcccactg cctccggtta gctgaaaagt
       61 gcttgaacct accgcaaatg agcagttcct acaaatcaac tttctggatt gcggcgcggt
      121 aaaatcaggg tgtccgtgaa ttccccctgg tcgtttccgt ctaatctgta tgagctattg
      181 tgcggttgag aatcgaccag gcatcgtata agcgaagaag ctgacattgc gacgcccgga
      241 agcaggcaac atcgacttgc ggtccataca atactgtcac ggaggcgcct atgaataaaa
      301 tgagttatac agccgttgtc attctgagcc tgctgatcat cggctgtagc tccagtaaca
      361 atggggcttt cgccgcgcgc agcgggcgag aagcgcaaca aaatgaacgg gcggcgatcg
      421 tggagcgttt gattcccgag gaaggtgcgc tgccggaaaa tcgcttgaag gacgtgctcg
      481 ctgcgatttc catggtcgac aaggggttcg agatggaaaa tcccacgcgg gaaagagtcc
      541 gccgtcacct gctagaccga gaagtcacga cgctgcgccg catcgagaca aacgtccgag
      601 ccatcgaaag gaaacgcagg gactagactg acgcgaattt tacatgccgc gccccgcatt
      661 gccatattca gcgctctgcc gggtcgttga caaaacacgc taaccgttcg cgagagcaac
      721 gccggctgct tattgttgtt ggactcgcaa cgcgcgataa atcgtctcgg cacttagcgg
      781 cagattaaac agccgcacgc caaccgcgtc ggcgatcgcg ttggcgatgg ccgccggcgg
      841 cgcgttgttg gcgaactcgc cgatgggctt ggcgttgtgc gggccgacgc cgccgccgga
      901 ggtgactaga acggttttca actcgaacag atcggcgatg gacggcaatt tgtaatcgcc
      961 gagattattg ttggtcactt tgccttgatc gatgacgatc tcttccatga gtccctggcc
     1021 gacgcccatc accgccgcgc cgtcgatctg cccctgatgc gtcaacggat tgatgatcgt
     1081 gccgacatcg tgggcggtga cgaagcgatg gagtttcacc gcgccggtct cgggatcgac
     1141 ttcgacctcg gcgacctgtg cgcagatgta cgaaaactcg tcgggtgcgc gatagtcttc
     1201 atagacggta acgagcagcg gttccgccgt ttgagcgaca acccggcgca gcaatacttg
     1261 ttgccccgga tcttggcgca gcgcaaactt gccgccgtcg aagtcaacgt cttcggcgcg
     1321 gcattccaat atgcgcgcgg cttgggcgag taatttgtcg cgcagctcgt cgcaggcttt
     1381 gatcatggca ttgccggcga cgtaagtcat gcggctggcg cgcatgccgc cgtcacgcgg
     1441 cgccgtatcg gtgtcgccga tgacaacacg cacatggtca atgccgattt tcattcggtc
     1501 ggcgaccaac tggcgcaaga tcgtgtgagt gcccgagcct tgatcgatgc tcgggctgac
     1561 gattaagtag ccgccgtccg cttcggcgct gagaatcacg ccggtgtcgc cgccgctgat
     1621 atggcggccc gaaagcgcga tgccgcgccc atgattggct ttcttcggtt tcttccaacc
     1681 ggcggcgtcc agtgcgcctt ggagcacttc acggaagcgc acgtctttca actcttgacc
     1741 gaccgcgtcg gcttctccgt cgctaagaaa gttcttcagg cgaaactcgg cggcatctat
     1801 agccaattct ttggcgatga tgtcggtgtg gcagtccacc gcgaatgccg tcgccaccgc
     1861 gccgggactg cgatagtaac cgccagggac ggtgttggta tagatctgca tgaactcaat
     1921 gtcggcgtgc tcgatgctgt actggccccc ggcatagtgc caggtcgcca acgaagtatt
     1981 ggacttgagc gcgccgtatc cgccgctggc atggacggcg cgcatttgcc gcgcgaccag
     2041 ccggccgtcg cgcattaccc cgctcttgat cgtgatcacc gtcggatgcg ccggattgct
     2101 cgccgacagc tcttcggcgt aggtcatgat gaacttgacc ggccgcccgg ttttctgcgc
     2161 aaggaaataa aggatcggca agtcgacacc gtcacccttg ccaccgaact cgccgccgac
     2221 gttgaccacg ttcatgcgga tgcgctcttc ggccaaaccc aggcatttgg ataactggct
     2281 gcgcactccg aagggatttt tcactccggc ccaaacttgt acgcggccgt ccggctcaat
     2341 cgcaacggtc gccgcgtgcg gttcgaggta gccttgatgg cgcgccggca cattgaaggt
     2401 gtgttcgaat accagatcgg cgtcgcggaa gccttgctcg atatcgcctt tcttccacgc
     2461 taatcgcgtg agaccgttgc gcaggtcggc ggcgagaata ttcttcggcg cgccatcgta
     2521 ctcggcgaca ttgtcatgga tctgcggcgc gcccggcgcc atcgcttcca gcggatcgaa
     2581 taccgcggga agaatttcgt aatcgacgtc gattaattga atggcttcct cggcaccatc
     2641 cacagtctcc gccgccaccg ccgccacccg gtcgccgatg aaacgcactt tgtcccagca
     2701 cagcaccggc aagtcgcgaa tctgcttgcc gatcaacagc cctcgcacgt ccgcgccggt
     2761 gagaattgcc ttcacgccag gcaccttggc cgccttgctg ccatcgacgc ggacaatccg
     2821 cgcgtgc
//
LOCUS       DATIRS010001064         3085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_277334, whole genome shotgun sequence.
ACCESSION   DATIRS010001064 DATIRS010000000
VERSION     DATIRS010001064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3085
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_277334"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..287)
                     /locus_tag="VLM90_13520"
     CDS             complement(<1..287)
                     /locus_tag="VLM90_13520"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSQ14040.1"
                     /translation="MASLSIEKVSKSFGHTRVLGAISFDVADGEFCVLLGPSGCGKST
                     LLRIVAGLEDASSGKIRIGAESVERTPPRERDVAFVFQNYALYPHMTVAENL"
     gene            complement(425..1237)
                     /locus_tag="VLM90_13525"
     CDS             complement(425..1237)
                     /locus_tag="VLM90_13525"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HSQ14041.1"
                     /translation="MKRIVFPAAVLLIAGVSLLPFLWFVTTSWKSAIEISAIPPVLWP
                     SFHWEHYQAALWQHGLLRYIANSAIVAGATTVVSIVIASLAAYALARFKLRWANYYLL
                     LLLALSMFPQIAIAGPVWRLLSGLGWLNSYHGIIAAYIAFSLPFATWVLTTFFKELPY
                     DIEEAALIDGCSRWQALRLVVFPLAAPGVFTAALLVFIHAWNEFFFALIILTYPAVQT
                     LPVGIALFPGEYTMPWGEIAAASTIATLPLIALTVIFQRRIVQGLSAGAVKG"
     gene            complement(1234..2124)
                     /locus_tag="VLM90_13530"
     CDS             complement(1234..2124)
                     /locus_tag="VLM90_13530"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HSQ14042.1"
                     /translation="MKSAKDPVWRFLAPSFLFVVLFSLYPIIESLRLSFYRMILTLPW
                     LGQKFVGWDNYRDLFSDPVALQSLLTSMTFVAVTTPIEVLLGLGMALVLNESFGGRGW
                     LRAVVLVPWAIPTVVASQMWRFIFNDRYGLFNFVLFGDATDRYWAPLAEPGLALMSIM
                     VADVWKTSSFAALIVLAGLQGIPRELYEAASIDGAGAWQKFRHITLPLLKPALLLALL
                     FRTIDALKVFDLVFVMTQGGPADTTNVLQFYGYKKSFAEGMIGYGSTIAVAVFLLSLI
                     LSVFYIRLLGARLLAREETA"
     gene            complement(2121..>3085)
                     /locus_tag="VLM90_13535"
     CDS             complement(2121..>3085)
                     /locus_tag="VLM90_13535"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14043.1"
                     /translation="EFFSAAQQKEFLTAPIAANRYQGRIYGVPLFVDAGMLYFRKDLL
                     AKYRLAPPRTWPELVDQAKLILARERDPYLTGYSAQFKQYEGLVCNLMEFIMSNGAAL
                     WDEQSLKSTLSSSRATEAVRFVRDQVIRTISHRGVLAYQEPESLALFTQGKALFHRNW
                     PYAWEVANDPQRSKVAGHVGVMPLPSFPGHKSVATLGGWQLGISRFSRHPLLAWQFVE
                     HMTSREAQKQIALATGRGPARADLYRDAELLAKHPHFSAAYDTFVLAEPRPRTPVYLP
                     LSNIMQRYFSSAIAIPDSNIDQLARVAARDMDRVLDLLRERPRP"
BASE COUNT          727 a          907 c          913 g          538 t
ORIGIN      
        1 agattctcgg ccacggtcat atgcggatag agcgcgtagt tttgaaagac aaaggcgacg
       61 tcgcgctcac gcggcggcgt tcgttccacc gactcggcac caatccgtat cttgccgctg
      121 gaagcgtcct ctaatcccgc gacgatgcgc aagagcgtcg acttgccaca acccgacggg
      181 ccgagcagca cgcaaaattc accgtcggcg acgtcaaaag aaatcgcgcc gagcacgcga
      241 gtgtggccga acgacttgga aactttttct atcgacagtg aagccatctt ccgatttgag
      301 attttgtctg cgcagctgct tttagatttt ggcttgtcgg aaactaccgc tgcagattcc
      361 atatcgatct tggcaggtcc gctcccctaa tccaaaatcg aaaatccaaa atctaaaatg
      421 ttttctatcc tttcaccgca cccgccgaca acccctgcac gatgcgccgt tgaaaaatca
      481 cagtcagtgc aatcaagggc agcgtcgcga tggtcgaagc cgcggctatt tcgccccagg
      541 gcatggtgta ttcgccgggg aacagcgcga tgcccacggg cagcgtttgc accgccgggt
      601 aggtcagaat gatcaaagcg aagaagaatt cattccaggc gtggataaaa accaatagcg
      661 ccgcggtgaa aaccccgggc gcggccagcg gaaacacgac taggcgcagc gcctgccagc
      721 ggctgcagcc atcgatcagc gccgcctcct cgatgtcgta gggcagttct ttgaagaagg
      781 tggtcagcac ccacgtggca aacggcagcg aaaatgcgat gtaggccgca atgatgccgt
      841 gataactatt gagccagccc agcccgctca gtaaacgcca caccggcccg gcgatggcga
      901 tctgcggaaa catcgacagc gccagcaaca acagcaagta atagttcgcc cagcgcagtt
      961 tgaagcgcgc taacgcatag gcggccaacg acgcaatcac gatactgacc acggtggtgg
     1021 cgccggcaac gatggcgctg ttggcgatat aacgcagcag cccatgttgc cacagcgcgg
     1081 cttggtaatg ctcccagtga aagctcggcc agagcaccgg cgggatcgcg ctgatctcga
     1141 tggcgctctt ccacgacgtc gtcacgaacc aaagaaaagg cagcaagctc acgccggcga
     1201 tgagcagcac ggcggcgggg aaaacaattc ttttcatgcg gtctcttccc tggccaatag
     1261 gcgcgcgccg agcaggcgaa tgtaaaacac cgacaagatc agcgacagca ggaataccgc
     1321 cacggcgatg gtcgagccgt aaccgatcat gccttcagcg aagcttttct tgtagccgta
     1381 gaattgcagc acgttggtcg tatcggcggg gccgccttgg gtcatgacga agaccagatc
     1441 gaagactttg agtgcgtcga tggtgcgaaa gagcaaggcc aaaagcagcg ccggcttgag
     1501 caatggcaag gtgatatggc gaaacttttg ccacgcgccg gcgccgtcga tactcgcagc
     1561 ctcgtaaagt tcgcggggga tgccttgcag tccggcgaga acgatcagcg ccgcgaacga
     1621 gctggtcttc caaacatccg ccaccatgat cgacatcaac gccaaaccgg gctccgccaa
     1681 cggcgcccaa tatcgatcgg tggcgtcgcc gaacaagaca aaattgaata ggccatagcg
     1741 atcgttaaag ataaagcgcc acatttgcga cgccaccacg gtggggatcg cccagggcac
     1801 cagcacgaca gcgcgcaacc agccgcggcc gccaaacgat tcgttcagca ccagagccat
     1861 gccgaggcca agcaagactt cgatgggagt ggtgaccgcg acgaaagtca tcgatgtcag
     1921 cagcgattgg agcgccaccg ggtcgctgaa aagatctcga tagttatccc aaccgacgaa
     1981 cttctggccc agccaaggca aggtcaggat catccggtaa aagctcaagc gcaaggactc
     2041 gataatcgga taaagcgaaa acagcacgac aaataaaaaa ctcggcgcga gaaagcgcca
     2101 gacgggatct ttggcgcttt tcacggccgc ggcctttcgc ggagcagatc caaaacgcga
     2161 tccatgtcgc gcgcggccac acgggcgagt tgatcgatat tggagtcggg aatggcgatc
     2221 gccgagctga agtagcgctg catgatattg gaaagcggca ggtagaccgg cgtccgcggt
     2281 cgcggctcgg cgagcacgaa cgtgtcgtaa gccgcgctaa aatgcggatg cttagccagg
     2341 agttcggcgt cgcgatacag atccgcccgc gccggcccgc ggccggtcgc cagggcgatc
     2401 tgtttttgcg cctcgcggct agtcatatgc tcgacgaatt gccaggctaa aagcggatgg
     2461 cgcgagaagc ggctgatgcc cagctgccag ccgcccagag tcgcgacgct cttgtggccg
     2521 ggaaacgacg gcaacggcat caccccgaca tggccggcga ctttcgatct ttgcggatcg
     2581 ttggcgacct cccaggcgta gggccagttg cggtgaaaca gcgccttacc ctgggtgaac
     2641 aatgccagcg attcgggctc ctgatacgcc agcacgccgc gatgggaaat cgtccgaatc
     2701 acttgatcgc gcacgaagcg caccgcctcc gtggctcggc tgcttgagag cgtgcttttc
     2761 agactttgct cgtcccagag cgccgcgccg ttgctcatga tgaattccat caggttgcag
     2821 accagcccct cgtactgttt gaactgcgct gaataaccgg tcagataggg atcgcgctct
     2881 cgcgccagga ttagcttggc ctggtcgacc agctcaggcc aagtgcgtgg cggcgcaagg
     2941 cggtacttcg ccagcaggtc tttgcgaaaa tagagcatgc cggcgtcaac gaacagcggc
     3001 acgccgtaga tccggccctg ataacggttg gctgcgatcg gcgcggtgag aaattctttt
     3061 tgctgcgcgg cggaaaagaa ttcat
//
LOCUS       DATIRS010001065         2796 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_376172, whole genome shotgun sequence.
ACCESSION   DATIRS010001065 DATIRS010000000
VERSION     DATIRS010001065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2796)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2796)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2796
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_376172"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(194..472)
                     /locus_tag="VLM90_13540"
     CDS             complement(194..472)
                     /locus_tag="VLM90_13540"
                     /inference="COORDINATES: protein motif:HMM:TIGR01687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HSQ14044.1"
                     /translation="MAVRVRVPTPLRKYTQGADEVSAAGGNVKSLVDDLEKNYPGIKA
                     RICDETGKVRRFVTVYVNGDDIRFLQNLDTAVKEGDNISIVPAIAGGH"
     gene            complement(483..761)
                     /locus_tag="VLM90_13545"
     CDS             complement(483..761)
                     /locus_tag="VLM90_13545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14045.1"
                     /translation="MSFAQGLECRECKQQYANQPTHVCDDCFGPLDIRYDYDGIKQAI
                     SRDKIAARPHNLWRYRELLPIEVAAPSPCKAQGEGLFSIHSANFTGNF"
     gene            complement(784..1572)
                     /locus_tag="VLM90_13550"
     CDS             complement(784..1572)
                     /locus_tag="VLM90_13550"
                     /inference="COORDINATES: protein motif:HMM:NF013094.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HesA/MoeB/ThiF family protein"
                     /protein_id="HSQ14046.1"
                     /translation="MADRLTSEQIERYSRQIMVPDLGGKAQMRLCQSRVLVIGAGGLG
                     SPAALYLAAAGIGTLGIVDADKVELSNLQRQILHATADIGRTKVESAKISLTALNPDV
                     DVIIHPVRFDESNAEQIAKGFDFIVDGSDNFDTKFLVNDLAVKWGIAFSHAGIVRLQG
                     QVMTVVPGKSACYRCLFKAPPPPEEILNCQASGILGAVAGTIGTIQATEAVKYLAGFE
                     DGLLTDRLLVYDAKNMRFREVEVRRDPQCAACGNGTGTTATTQL"
     gene            complement(1699..2616)
                     /locus_tag="VLM90_13555"
     CDS             complement(1699..2616)
                     /locus_tag="VLM90_13555"
                     /inference="COORDINATES: protein motif:HMM:TIGR01127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HSQ14047.1"
                     /translation="MPVFAPLIKISRVRQYGAQGVLHGNDYDSALTEAQRLSQERGMT
                     FVSAFNDPWIIAGQGTIGLELYEQNPDLDAVVVPVGGGGLIAGIAVVLKTLNPQITII
                     GVQAEAVPSMKTALAGGAPVRLPPATTIADGIAVRRVGETPFALVKEFVDEIVTVSEG
                     EIANAVLLLLEIEKTVAEGAAAVPLAALMNKKISLAGKNIGLIVSGGNIDMNLISRII
                     ETGMIQDGRQCRLNVIVTDRPGNLARLSQRIAELGANILQIGQSRGFGRIAIGETEVE
                     LVLETAGAEHIQRLRDGLSHDGFRLQAEN"
     gene            complement(2591..>2796)
                     /locus_tag="VLM90_13560"
     CDS             complement(2591..>2796)
                     /locus_tag="VLM90_13560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14048.1"
                     /translation="RMTGNRVFFKLENLQMTGSFKERGALNRLLTLSVDEAQHAVIAG
                     AGVSQPQVKHRRHHRHAGIRAAD"
BASE COUNT          532 a          770 c          874 g          620 t
ORIGIN      
        1 ttgaagcctt ccagtttggc gaaaattctg acgcccttcg gtaagcccgc gccgatccgc
       61 tgaatttcca agagcggcgt gttgccgatc agatcgaggg tcgattcgac cttaattggc
      121 gctccgggat ttgctggaac caggcgcaag ttgggcgagg tctgagtcat cgtcgcgatc
      181 aaagttcgat cgactaatgc ccgccggcga tggcgggcac gatggaaatg ttgtcgcctt
      241 ccttgaccgc cgtgtcgaga ttttgcagaa agcgaatgtc gtcgccgttc acatagacgg
      301 tgacgaagcg gcgcaccttg ccggtttcgt cgcagatgcg cgctttgatg ccgggatagt
      361 ttttttccag atcgtcgacg agagacttga cattgccgcc tgcggcactc acttcgtcgg
      421 ccccctgcgt atacttacga agcggggtgg ggacacgaac tcgcacggcc ataacgaacc
      481 tcctaaaaat ttccagtaaa attggctgag tgaattgaga ataatccttc accctgcgcc
      541 ttgcaaggtg agggagctgc aacttcgatc ggcaggagtt cgcgatagcg ccacaggtta
      601 tgcggccgcg cggcgatttt gtcgcggctg atagcttgtt tgatcccgtc gtagtcgtag
      661 cgaatgtcga gtggaccgaa acagtcgtcg cacacatgtg tcggctggtt ggcatattgt
      721 tgcttacact cgcggcactc aaggccttgg gcgaaactca tggcgatgat tttatcgctg
      781 gcactaaagt tgtgtcgtcg cggttgtgcc ggtgccgtta ccgcaggcgg cgcattgcgg
      841 atcgcgtctg acttcgacct cgcggaagcg catgttcttg gcgtcgtaga ccaataagcg
      901 gtcggtgagc aggccgtcct cgaagccggc caaatatttc accgcctcgg tggcctgaat
      961 ggtgccgatg gtgccggcca cggcgccgag gatgccagag gcttggcagt ttaagatctc
     1021 ttctggcggc ggcggggctt tgaacaggca gcggtagcac gcactcttgc cgggtaccac
     1081 ggtcatgacc tggccctgca agcggacgat gccggcgtgg gagaaagcga tgccccactt
     1141 caccgccagg tcgttgacga gaaatttggt gtcaaagtta tcgctgccgt cgacgatgaa
     1201 gtcgaagccc ttggcgattt gttcggcatt gctctcatcg aagcggactg gatggatgat
     1261 cacgtcgaca tcgggattga gtgcggtcaa gcttattttc gccgactcga ccttggtccg
     1321 gccaatatcg gcggtggcgt gaaggatctg gcgctgtaaa ttcgacagtt ccactttgtc
     1381 cgcatcgacg attcccagcg tgccgatgcc ggccgcggct aaataaagcg ccgccggcga
     1441 gcccaagcca ccggcgccga tgaccagcac gcgagattgg cacaggcgca tctgcgcttt
     1501 gccgccaaga tcgggaacca tgatttggcg gctgtagcgt tcgatttgct cgctggtcag
     1561 acggtcggcc atgtcgcggt gcgcactcgc tcaaaaatct cttttgccaa atttggctgt
     1621 gaagtcgcct ggcaagctaa cgcaccggcg ccgccgaagt caaccaggaa cgccgcgatc
     1681 gggagcaatt acagacggtc agttttcagc ctgcaagcga aagccgtcgt ggcttaagcc
     1741 atcgcgcagg cgctgaatat gttcggcgcc ggcggtttcc agtacgagtt cgacttcggt
     1801 ctcgccgatg gcgatgcggc cgaaaccgcg gctttggccg atctgtagaa tattggcgcc
     1861 caactcggcg atgcgttggc tgaggcgggc gagattgcca gggcggtcgg tgacgatcac
     1921 attcaaccgg cactggcgtc catcctggat catgccggtt tcgatgatgc gagagatcag
     1981 attcatatcg atattgccgc ctgagacgat gagtccgatg tttttgccgg cgagcgagat
     2041 ttttttgttc atcaatgccg ccaagggcac ggcggcggcg ccttcggcaa cggtcttttc
     2101 gatttccagg agcagcagca ccgcgttggc gatttcgcct tcgctgacgg tgacgatttc
     2161 atcgacgaat tctttgacca gggcgaacgg ggtctcaccg actcgacgca cggcgatgcc
     2221 gtcggcgatg gtggtggcgg gcggaagccg aaccggcgcg ccgccggcta aggcggtttt
     2281 catcgatggc acggcctcgg cctggacgcc gatgattgtg atttggggat tcaatgtttt
     2341 cagtactacg gcgatgccgg cgatcaatcc gccgccgcct accggcacga ccaccgcatc
     2401 gagatcggga ttttgctcgt acagttcgag tccgatggtg ccttgaccgg cgatgatcca
     2461 aggatcgttg aacgccgaga cgaaggtcat gcctcgttct tggcttagcc gctgggcttc
     2521 ggtgagcgcg ctgtcatagt cgttgccatg gagcacgcct tgcgcgccgt attggcgcac
     2581 ccttgagatt ttaatcagcg gcgcgaatac cggcatgacg atggtggcgg cgatgtttaa
     2641 cctgtggctg tgaaacgcca gcgccggcaa tcacggcgtg ttgcgcttcg tcaacggaga
     2701 gcgtgagcaa gcggttgagc gcgccgcgct ctttgaagga accggtcatt tgcaagtttt
     2761 ccaacttaaa aaagacccgg ttgccggtca tccggc
//
LOCUS       DATIRS010001066         1550 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_671217, whole genome shotgun sequence.
ACCESSION   DATIRS010001066 DATIRS010000000
VERSION     DATIRS010001066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1550
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_671217"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1067)
                     /locus_tag="VLM90_13565"
     CDS             complement(<1..1067)
                     /locus_tag="VLM90_13565"
                     /inference="COORDINATES: protein motif:HMM:NF012449.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0030955 - potassium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HSQ14049.1"
                     /translation="MKVAGDLTGRHFDDPGQGDLTMGKSDLEQHAAALLGPPPANRDV
                     RIMVTMPSEAATDYRLVSDLVASGMDCMRINCAHDHEDAWANMVEHLRRAQAEHGKAC
                     RVIMDLPGPKLRTGPIETAPGIVKWKPRRDRYGKVTALARIWLTPVEHPEPACERADA
                     CLTVPGQWLARLRSGDRIAFVDARGSSRSMAVTEPIGASYLAESSQTSYVTSETTLRV
                     KRLKHVTRIGALPPVQTAIVLKPGDFLVLTKTDDPGSAALRGEQGEILEPARIGVTLP
                     QIFADARAGESIWFDDGKIGGVIRSVDPDEMRVEIVQARAKGANLRADKGINLPDSEL
                     NLRALTPEDIAILPFIARHAEL"
     gene            1182..>1550
                     /locus_tag="VLM90_13570"
     CDS             1182..>1550
                     /locus_tag="VLM90_13570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14050.1"
                     /translation="MEQISRTIAMRFRQRLDLRAKALFRMQHFIANLQQFPDRLVQTI
                     PGAIIFQSSRLHKVLPSVASWKQQLYRPAIFNHALKKTSHSLKTVSKLSDYRSFQSRL
                     ILALATKNLPASVDCKELPTD"
BASE COUNT          333 a          465 c          418 g          334 t
ORIGIN      
        1 agttcggcgt gacgcgcgat aaacggcaat atcgcgatat cttcaggagt caaagcgcga
       61 aggttgagtt cactatcagg aagattgatg cccttgtcgg cgcgcagatt tgcccccttg
      121 gctctcgcct gaacgatttc cacgcgcatt tcatccgggt cgacagagcg gatgacgccg
      181 ccaatcttgc cgtcatcgaa ccagattgat tctcccgctc gcgcgtcggc gaagatttgc
      241 ggcaaggtga cgccgatcct agcgggctca agaatctcgc cttgctcgcc gcgaagcgcc
      301 gcgctgccgg ggtcgtcggt cttcgtcaag accaaaaaat cgccaggctt cagaacgatc
      361 gccgtttgca caggcggaag ggcgccgatc cgagtcacat gcttgagccg cttaacacgc
      421 aaagttgttt ccgatgtgac gtaggatgtt tgacttgatt cggccagata gctggcgccg
      481 ataggctcgg ttaccgccat cgagcgcgat gagcctctcg cgtcaacaaa cgcgattctg
      541 tcgccgctac gtagtcgggc gagccactga cccggcactg ttaagcaagc gtctgcgcgc
      601 tcacaagccg gctcaggatg ctccactggc gtcaaccaaa tacgcgccag cgcagtcacc
      661 ttgccgtagc gatcgcggcg cggtttccac tttacaatgc cgggcgcggt ctcgatcggg
      721 ccggtgcgca gcttggggcc gggcaggtcc ataatcacgc ggcaagcctt gccgtgctcc
      781 gcctgagctc ggcgcagatg ctcgaccata ttagcccacg cgtcttcgtg atcatgggcg
      841 cagttgatgc gcatgcaatc catgccgctg gcgacgagat cgctcaccag tcgataatcg
      901 gttgcggctt cgcttggcat cgtcaccatg atccggacat cgcggttggc tggtggaggg
      961 ccgagcaggg cggctgcatg ctgctcaaga tcagatttgc ccatggttaa atcaccttgt
     1021 ccgggatcat caaagtgccg accggtcaga tcaccggcga ctttcataac cgcattgaga
     1081 ttcgccaaag ctcgcgactc acaccgtcct agggacgata agccgaataa tgcgagtttt
     1141 tcctgcaacg gccgcatgtc gcgccgcctg agggccaaat aatggagcaa atttctcgca
     1201 ccatcgcgat gcgcttccgc caaagactcg acttgcgcgc aaaagcgctt ttccgcatgc
     1261 agcatttcat cgcgaatctc caacaattcc cggatcggct cgtccaaaca attccaggcg
     1321 caattatttt ccaaagttct cggctccata aagttttgcc ctctgtggcc tcgtggaaac
     1381 aacaattata ccgtccggct atctttaacc atgcgttaaa gaaaacttca cattcgctta
     1441 aaaccgttag caagttgtcg gactatcgat cgtttcaaag tcgactaatc ttagcgctcg
     1501 cgacaaagaa cctccccgcg agcgttgact gcaaggaact tccgacggat
//
LOCUS       DATIRS010001067         1725 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1065126, whole genome shotgun sequence.
ACCESSION   DATIRS010001067 DATIRS010000000
VERSION     DATIRS010001067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1725
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1065126"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1701)
                     /locus_tag="VLM90_13575"
     CDS             complement(<1..1701)
                     /locus_tag="VLM90_13575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14051.1"
                     /translation="MQAKTLPELGLKGSLAYLDAGSPPIVKVHGLVLESAASHLQLSG
                     DVTDFDKPKIAAKLAIDKLGAADIVRFAPDWPVKQSLAGTIAANGPLEALTVALDIGQ
                     AGAKATGNFIIDATAPAPRFRGTIKLAGVDARTWLASEQGVAGVLDGSAEVTGVGVDL
                     AQLAGAGNFNIRAAEVKGWKLGDLRLQTKLHESTALLSGDLTGALGGAEWRGNVTLSQ
                     VPRYEFDFAVKNLDIAKVSAEGKSLGGVLNLKGAVKGSGLTLAQLSGQTNLEILPSSI
                     GSVKISKGELVAALAGGRIRIARGSLSTADSSLAVKGDIGVDLAQQGRLDYELRSENI
                     SPWLALAGESGSGSLTLAGSAQGNLTELKSRGALKVANLGYGKLAVKSGAVDFNLART
                     AQQPIPSGDVAARLSGVQAGVELQKLDATAKLGTASRSARIDVKAQDGSGRIHTLQSA
                     IDYSQANIIATLSQASFSLPDGMWKLAAPATLSKRGETFNVQNLTLRNGAKAAALDGQ
                     LAMTGTQGLNLTVERFPLEGLATVFSKQPPMTGLVALRAQVGGTAAAPEITGTINLTD
                     A"
BASE COUNT          324 a          558 c          480 g          363 t
ORIGIN      
        1 cgcatcggtc aagttaatcg ttccagtgat ctccggcgcc gccgccgtgc cgccgacctg
       61 ggcgcgcagt gccactagtc cagtcatcgg cggttgtttg gaaaagaccg tcgccagccc
      121 ttcaagcgga aacctctcga ccgtcagatt caacccctga gtcccggtca tggcgagctg
      181 gccatccagc gccgcggctt tggcaccgtt gcgcaaggtg agattttgaa cattgaaagt
      241 ttcgccgcgt ttgctcagcg tcgccggcgc tgccagcttc cacatgccgt ccggcaagct
      301 gaaactggcc tggctcaacg tcgcaatgat attggcttgg ctgtaatcga tagcgctctg
      361 aagcgtatga atccgccccg acccatcctg cgctttaaca tcgatacgcg ctgagcgcga
      421 tgccgttccg agcttcgccg tagcgtcgag cttttgtaac tcgacgccgg cttgcacccc
      481 cgacaagcgc gctgcgacat cgccgctggg aatcggctgt tgcgctgtcc gtgcgagatt
      541 gaaatcaaca gcgccgctct ttaccgccaa tttgccgtag cctaggttag ccactttcag
      601 cgcgccgcgg gatttcaact cggtaagatt gccttgcgcg ctacccgcaa gcgtgagcga
      661 gccgctcccc gactcaccgg caagcgcgag ccaaggcgag atattctcgc tgcgcagctc
      721 gtaatcgagc ctgccttgct gcgcgagatc cacgccgata tcgcctttta ccgcaagcga
      781 tgagtcagcc gtgctgagcg atccgcgggc gatgcgaatt ctgccaccgg cgagagccgc
      841 aaccagctca cccttgctta tcttcaccga gccgatggac gacggcagaa tttccagatt
      901 ggtctgcccg ctcagctgcg caagcgtcag gccggaaccc ttgacggctc cttttaaatt
      961 gagcacaccg ccgagggatt ttccttccgc ggaaactttt gcgatgtcga gatttttaac
     1021 cgcgaagtca aattcgtaac ggggcacttg gcttaacgtg acgttgccgc gccattcggc
     1081 gccgccgagc gcgcctgtga gatcgccgct caagagcgcg gtgctttcgt gcagtttagt
     1141 ttgcaggcgc agatcgccca acttccaacc ctttacttcc gccgcgcgaa tattgaagtt
     1201 gccagcgccc gccagttgag cgagatcaac tcccactccc gtaacttcgg cgctgccgtc
     1261 gagaactcct gcgactccct gttccgacgc cagccaggtt cgcgcatcga caccggcgag
     1321 cttgatcgtt ccgcgaaaac gcggcgccgg cgcggtggca tcgatgataa aattgcccgt
     1381 cgccttagcc cccgcctggc caatatccaa ggcaaccgtt agtgcttcca gcggtccgtt
     1441 tgcggcgatg gtgccggcaa ggctctgttt gaccggccag tccggagcga agcggacaat
     1501 atccgccgcg ccgagcttgt cgatggctag cttggcggcg attttcggtt tgtcgaaatc
     1561 ggtcacgtcg ccgcttaatt gcaaatgtga cgccgccgat tcaagcacca aaccatgaac
     1621 tttcacaatc ggcggcgaac cggcgtcgag gtaagcgagc gaacccttca gacccaactc
     1681 cggtaatgtt ttcgcctgca accgagcgct aatttcgtct gcgtc
//
LOCUS       DATIRS010001068         1503 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_376431, whole genome shotgun sequence.
ACCESSION   DATIRS010001068 DATIRS010000000
VERSION     DATIRS010001068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1503
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_376431"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(295..>1503)
                     /locus_tag="VLM90_13580"
     CDS             complement(295..>1503)
                     /locus_tag="VLM90_13580"
                     /inference="COORDINATES: protein motif:HMM:NF013086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HSQ14052.1"
                     /translation="HPTPAFPAGILLTEGARGDGGLLKDVDGHRFMPDYEPEKRELAS
                     RDVVSRRMEEHIAKGKGVKSRFGEHLWLDITLLGEHHIKHNLREVYEICHYFLGVDPV
                     KDWVPVRPAQHYTMGGVRTNHTGESPTLKGLFSAGEAACWDMHGFNRLGGNSVAETVA
                     AGMIVGEFIADFCERERSGNIPICVIEETLRREQAKIDALTDGRGTENAAAIMAEMQT
                     IMTAKVGIFRTGKALEEAVHELQQLLLRSRNIGLRYKARGANPELVTAYRVQKMLRMA
                     LCVAYGALQRTESRGAHFREDFPRRNDGQWLNRTLATWKSENDTLPSLAYEQLDVMKM
                     ELPPGWRGYGAKDHIDHPDTARRMAEIEALKQARDGADRFTVQGKLMPYEHLMPKTLR
                     GRNERLGETV"
BASE COUNT          255 a          490 c          436 g          322 t
ORIGIN      
        1 gtgtcccgcc ccgcccctgc ctgaaaataa ttgaccgacc gctgggtctg cgccccccag
       61 taacggtccg atgggacggc aatttcgccc atggtatctt tctcgatccg agtctcagcc
      121 atgccgtgct actttcgtcg cgcgctcctt gcggagcagt tcaacgttca aggttcaaag
      181 ttcaacgtca gacaactccg gttcaaagtt ccgggttcaa ggttcaacgt ccggcctctc
      241 ccccactcgg aactcggaac ccggaactcg gaacagtgta aggcgcgccg cgccttacac
      301 tgtttcgccg agacgttcat tcctgccgcg gagggtcttc ggcatcagat gctcgtaggg
      361 catcaacttc ccctgtacgg taaagcgatc cgcgccatcg cgcgcctgtt tgagcgcttc
      421 gatctcggcc atgcgtctgg ccgtatccgg atgatctatg tgatccttgg caccatagcc
      481 gcgccaaccc ggcggcaact ccattttcat gacatcgagt tgttcgtacg cgagcgaggg
      541 tagagtatcg ttctcggact tccacgtcgc caacgtgcgg ttcagccatt ggccgtcgtt
      601 gcggcgcggg aagtcctcgc ggaagtgagc accgcggctt tcggttcgct ggagcgcgcc
      661 gtaggcgacg caaagcgcca ttctgagcat cttctgcacg cggtaggccg tcaccagctc
      721 cggattggcg ccccgcgcct tgtagcgcag accgatattg cggctgcgca acaatagttg
      781 ttgcagctcg tgtaccgcct cctccaacgc tttgccggtg cggaagatgc cgaccttcgc
      841 cgtcatgatc gtttgcatct cggccatgat tgcggcggcg ttttccgtgc cgcggccgtc
      901 ggtcaaggcg tcgatcttgg cttgctcgcg gcgcagcgtt tcctcgatca cacagatggg
      961 aatatttccg gatctttccc tctcgcaaaa atcggcgatg aactcgccga cgatcatgcc
     1021 ggcggccacg gtctcggcca ccgagttgcc gcccaggcga ttgaagccgt gcatgtccca
     1081 gcaggccgct tcgccggcgg aaaataggcc cttgagcgtc gggctttcgc cggtgtgatt
     1141 ggtgcgcacg ccgcccatcg tgtaatgctg cgccggccgc accggcaccc agtccttcac
     1201 cggatcgaca ccgagaaaat agtggcagat ctcgtagacc tcgcgcaggt tgtgcttgat
     1261 gtggtgctcg cccaaaagcg tgatgtccaa ccatagatgc tcgccgaagc gcgacttcac
     1321 gcccttgccc ttggcgatat gctcttccat gcgccgcgag acgacatcgc gcgaggccaa
     1381 ttcccttttc tccggttcgt agtcgggcat gaaccgatgg ccgtcaacgt ccttcagcaa
     1441 gccgccgtcg ccgcgcgcgc cttcggttag caggatgccg gcgggaaacg ccggcgtcgg
     1501 atg
//
LOCUS       DATIRS010001069         3119 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1458381, whole genome shotgun sequence.
ACCESSION   DATIRS010001069 DATIRS010000000
VERSION     DATIRS010001069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3119)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3119)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3119
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1458381"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1682)
                     /locus_tag="VLM90_13585"
     CDS             complement(<1..1682)
                     /locus_tag="VLM90_13585"
                     /inference="COORDINATES: protein motif:HMM:NF015089.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase domain-containing protein"
                     /protein_id="HSQ14053.1"
                     /translation="MQARRQQLLPLFQKNEVLFGHDATAAAIAFEVDGDASVQMFFRD
                     GETVRSAAAKLHPLLLLEGDDPLSGWSGEAQIEKLAGSGPFNRLALFAGLKQLDDAKA
                     YLQKKTGKTPSAGDAPYWYFSDPLQQFLLLSGRTHFLGMTFRELKRLQLDIETYCQSG
                     FNFPSAARESDRITAIALSDSTGWERLISGKEYSEAEMLRELVQEIQRRDPDVIEGHN
                     IFRFDLEYIEARAKRHKVALNFGRDGSRLSGHASRMQMAERTITYRKYDIFGRHIIYT
                     WILAQHYDVATRELENFDLKDVARHFDVAGAERTYVPSDKTSWYFDHDADTLFLNALD
                     AVRETRAIAEILSPSYFVQAQIFPFSYQNMPLRGNATKIDALFLREYLHQRHSVPFPD
                     EVGAVIGGFTDMEFQGIANHVLHCDVTSLYPSIMLVYQYLPKKDELGVFPGLLTDLRT
                     FRLKAKELARDAEDEEGRVYFNALQSTFKILINSFYGYLGFQMGHFNDFSAANQVTAK
                     GRELIQFAVAWLKGKDAKIIEVDTDGIYFVPPEIVRTGNDEEKLIDDLGEILP"
     gene            1829..2608
                     /locus_tag="VLM90_13590"
     CDS             1829..2608
                     /locus_tag="VLM90_13590"
                     /inference="COORDINATES: protein motif:HMM:NF021287.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0043248 - proteasome assembly [Evidence
                     IEA];
                     GO_process: GO:0051131 - chaperone-mediated protein
                     complex assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PAC2 family protein"
                     /protein_id="HSQ14054.1"
                     /translation="MDPLSFDSRPTLRSPTLVLAFAGWSDAGASATTALRYLVDNLMG
                     RKFASIDPEEFYDFYRQRPVVRLNDAKVREIHWPSFDFYHGAGIGLERDFIFGIGAEP
                     HLRWRTFTETMLRFASECDAEMVVTLGAYLDEVLYTRPVPLTGFSTDAKLMEQLDLAP
                     SRYQGPTGIVGVLTDACRQSGMENLSIWASLPHYLNVSPNPRGSLALLLRMNQWLGLR
                     VDTTPMERAAADFQAKINEAVNADPKLSAYVRELKKREFEQ"
     gene            2605..>3119
                     /locus_tag="VLM90_13595"
     CDS             2605..>3119
                     /locus_tag="VLM90_13595"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSQ14055.1"
                     /translation="MKLSVLVPVYNEERTLEEVVRRVCAFPKAKEIILVDDGSKDRSR
                     EILTRLQEANQRAKDPLNHIRIFFQERNQGKGAALKTALGHVTGEIVLVQDADLEYDP
                     ADYPALIEPIEKGLADVVYGTRFAGGGAHRVFFFWHSMGNRVLTLMSNMLSNLNLSDM
                     EVGYKVFRAQVL"
BASE COUNT          633 a          843 c          945 g          698 t
ORIGIN      
        1 ggcagaatct cgccgagatc gtcgatcagc ttctcctcgt cattgccggt cctgacaatt
       61 tccggcggca cgaaatagat gccatcggtg tcgacttcga tgatcttggc gtctttgcct
      121 ttcagccagg cgacggcgaa ctggatcagt tcccggccct tggccgtaac ctgattggcc
      181 gcgctaaaat cgttgaagtg gcccatctga aaacccaggt agccgtaaaa ggaattgatg
      241 agaattttaa acgtcgattg caaggcgttg aaataaactc gaccttcctc gtcctcggcg
      301 tcacgggcga gctccttggc tttgagccgg aaggtgcgca ggtcggttaa cagcccgggg
      361 aagacgccga gctcgtcttt ctttggcagg tattgataaa ccagcatgat cgacgggtag
      421 agcgaggtga cgtcgcagtg cagcacatga ttggctatgc cctgaaactc catgtcggtg
      481 aaaccgccga tgacggcgcc gacctcgtcg gggaagggca cggaatggcg ttgatgcaga
      541 tattcgcgca ggaacagggc gtcgattttg gtggcgttgc cgcgcagcgg catgttctgg
      601 tagctgaatg gaaaaatctg cgcctgcacg aagtagctgg gcgaaaggat ctcggcgatc
      661 gcccgggtct cgcgcactgc gtccagggcg ttgagaaaca aggtgtcggc atcatgatcg
      721 aaataccaac tggtcttgtc actcggcaca taggtgcgct cggcgccggc gacgtcaaaa
      781 tggcgcgcga cgtctttcaa atcgaagttc tccagttcgc gggtggcgac gtcgtaatgt
      841 tgcgcgagaa tccaggtgta gatgatatgg cggccgaaga tatcatattt ccgataggtg
      901 atcgtccgct cggccatctg catgcgcgac gcatggccgc tcaagcgcga gccgtcgcgg
      961 ccgaagttga gcgcgacttt gtgacgcttg gcgcgggctt cgatgtactc caaatcgaag
     1021 cggaaaatat tatgcccctc gatcacgtcc gggtcgcgcc gctggatctc ttgcaccagt
     1081 tcacgcagca tctcggcttc gctgtactcc ttgcccgaga tcagccgctc ccaaccggta
     1141 gagtcggaca gagcaatggc cgtgatacgg tcgctctccc gcgctgcgct gggaaaatta
     1201 aaaccgctct ggcaataggt ttcgatgtcg agctgtaagc gcttcaactc gcgaaaggtc
     1261 atgccgagaa aatgcgtcct accggaaagt aacagaaatt gttgcagtgg gtcgctgaaa
     1321 taccaataag gcgcgtcgcc ggcggagggt gtcttgccgg tctttttctg caaataggcc
     1381 ttggcgtcgt cgagctgttt caagccggcg aacagcgcca aacggttgaa ggggccgctg
     1441 ccggcgagct tttcgatttg cgcttcgccg ctccagccgc tgagtgggtc gtcgccttcg
     1501 agcagcagta aagggtgtaa tttcgccgct gcgctgcgca ccgtttcgcc gtcgcgaaaa
     1561 aacatctgga cactggcgtc gccgtcgact tcgaatgcga ttgctgccgc cgtggcgtca
     1621 tggccaaaca ggacttcgtt tttttgaaat agcggaagta gttgttgccg gcgtgcttgc
     1681 ataagctcag cgctgactat agcaaactgc tcgggattcg cctagccgct gtgtcggggg
     1741 cgggttgcgc tggtgcctaa aaattattcg tcgaaccccg cttttccctg gaggatttgg
     1801 cgtgggatat ggtaaattaa taatagttat ggacccgctc agttttgaca gccgcccgac
     1861 gctgcgcagc ccaaccctgg tgctggcatt tgccggctgg agcgatgccg gggcatcggc
     1921 gacgacggcg ttgcgctatc tggtcgacaa cctgatgggc aggaagttcg ccagcatcga
     1981 tccggaggag ttttacgatt tttaccgcca gcggccggtg gtccggttaa atgacgccaa
     2041 ggttcgcgag atccattggc catcgttcga tttctatcat ggcgccggca tcggccttga
     2101 gagggatttt attttcggca tcggcgccga gccgcatctg cgctggcgga ccttcactga
     2161 aaccatgctg cgtttcgcca gtgagtgtga cgcggagatg gtggtgactc tgggcgccta
     2221 tctcgacgaa gtgctctaca cccggccggt gccgctcact ggattttcca ccgatgctaa
     2281 attgatggag cagttggatc tcgcgccatc gcgctaccag ggccccaccg gcattgtcgg
     2341 ggtgttgacc gacgcttgcc gccagagcgg tatggagaat ctcagcattt gggcgtcgct
     2401 gccgcattat ctcaatgttt cgcctaaccc gcgcggcagc ctggcgctgc tcttgcggat
     2461 gaaccaatgg ctcggcttgc gggtcgacac gacgccgatg gaacgcgccg ccgccgattt
     2521 tcaggccaag atcaacgaag ccgtcaacgc cgacccaaaa ctttctgcgt acgtgcgtga
     2581 attgaagaaa cgcgaattcg agcagtgaag ctctccgtcc tcgtcccggt ctacaacgaa
     2641 gagcgcacgc tggaagaggt ggtgcgccga gtgtgcgcct ttccgaaggc gaaggagatc
     2701 attcttgtcg acgatggttc aaaggatcgg agtcgtgaga ttctcacgcg tttgcaggaa
     2761 gcgaatcagc gggcgaagga tccactcaat cacattagga tttttttcca ggagcggaac
     2821 cagggcaagg gtgcggcgct caaaaccgcg ctcggtcacg tgaccggtga aatcgtctta
     2881 gttcaggatg ccgacctcga atatgatccg gcggactatc cggcactgat cgagccgatt
     2941 gaaaaagggc tagccgatgt ggtctacggc acgcgtttcg cgggtggcgg tgcgcaccgg
     3001 gtgttctttt tttggcactc gatgggcaat cgagttctca cattgatgtc caacatgctt
     3061 tccaatctaa atctctctga catggaagtc ggttacaaag tatttcgcgc gcaagtact
//
LOCUS       DATIRS010001070         2077 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_769960, whole genome shotgun sequence.
ACCESSION   DATIRS010001070 DATIRS010000000
VERSION     DATIRS010001070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2077
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_769960"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..249
                     /locus_tag="VLM90_13600"
     CDS             <1..249
                     /locus_tag="VLM90_13600"
                     /inference="COORDINATES: protein motif:HMM:NF014850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 2 TIM barrel-domain
                     containing protein"
                     /protein_id="HSQ14056.1"
                     /translation="LVQQLADGRVRFAYGGQFGDEPNDGNFVADGLVHADLTPHPAMR
                     EVAWVHRPVTVERVRGGLRVSGRHHRLHSVLAPQGEKL"
     gene            236..1387
                     /locus_tag="VLM90_13605"
     CDS             236..1387
                     /locus_tag="VLM90_13605"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ14057.1"
                     /translation="MRNFEPLEPEYVKDAPIFENRVEKDIDLEAFPIPRWHELDGGRY
                     IGTDDLVITQDPEEGWVNAGTYRVMLQGKDAVALYISPGKHGGLHRKKYFDMGKPCLV
                     VMSFGHHPLLFIAGCTDVPVKMSEFAYAGGVLNEPIQLVRGPHTGLPIPAYSEIAIEG
                     ELHPGDNLPEGPFGEWPGYYASDTRPEPVMRIKALYHRNNPILCGEPPLRPSAGQGFH
                     RSIQRSALIWNALEDAGVPDVKGVWLHPAGYRFFSIIKITQRYPGHAKQAALIASQCR
                     PGAYLGRYIVVVDDDIDIYNPDDVIWAMSTRSEPENIDIIRRCWSGPLDPAIPKERKG
                     FNSRAIIDATRPYDWRDKFPAVNAVSDDLKAALDKKYASLLQQVFDRSH"
     gene            1506..>2077
                     /locus_tag="VLM90_13610"
     CDS             1506..>2077
                     /locus_tag="VLM90_13610"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14058.1"
                     /translation="MKKLVLFSLAALLPAGLFLQGAAHSQPYALTLGYSGIGLTTDLR
                     RVIERDKVWEKHGVIVKAIYFNSGSLMAQAMAGGSITASDSDLPAMLNLAVSGVSDMK
                     TIAVTINRLEHIFVSRKNITKPEELKGKRIAVSRLGSASDLVTRMVLRTWKVDPEKEV
                     TLLQAGNTPTRMSALTAGHVDAALISPDSL"
BASE COUNT          438 a          670 c          589 g          380 t
ORIGIN      
        1 ttggtacagc aactggcgga cgggcgggtg cggtttgcct acggcggcca gttcggggac
       61 gagccgaacg atgggaactt cgtggccgac ggcctggtgc acgccgacct cacaccgcac
      121 ccggcgatgc gcgaggtggc gtgggtgcac cgcccggtca ccgtcgagcg tgtgcgcggt
      181 gggttgcgcg tcagcggtcg gcatcaccga cttcattcag tcctggcgcc gcaaggtgag
      241 aaactttgag ccgctggaac cggaatatgt aaaagacgcg ccgatctttg agaaccgcgt
      301 cgaaaaagat atcgatcttg aagcctttcc gatcccgcgc tggcatgagc tcgacggcgg
      361 ccgctacatc ggcaccgacg acctggtgat cacccaagac cccgaagagg gctgggtaaa
      421 cgccggaacc tatcgcgtca tgctccaggg caaagacgcg gtcgcacttt atatctcgcc
      481 gggaaaacat ggcggtctgc accgcaaaaa atacttcgat atgggcaagc cctgcctggt
      541 ggtcatgtcc ttcggtcatc atccgctgct cttcatcgcc ggctgcaccg acgtgccggt
      601 caagatgagc gagttcgctt acgccggcgg cgtgctcaac gagccgatcc aactggtgcg
      661 cggaccgcac acgggtttgc cgattcccgc ctattcggaa attgccattg aaggcgagtt
      721 gcatcccggc gacaatttgc ccgaaggccc cttcggtgaa tggcccggct actacgccag
      781 cgacacgcgg cccgagcccg tcatgcgcat caaggcgctc tatcatcgaa acaatccgat
      841 tctctgcggc gaaccgccgc tccgcccttc cgccggtcaa ggctttcacc gctcgatcca
      901 gcgctccgcg ctgatttgga atgccctcga agacgccggc gtgcccgatg tcaaaggcgt
      961 gtggctccat cccgccggct atcgcttttt ttcgatcatc aagatcacgc agcgctaccc
     1021 cggacacgcc aagcaagccg cgctgatcgc cagccaatgc cgtcccggcg cctatcttgg
     1081 ccgctacatc gtcgtcgtcg acgacgacat cgatatttac aatcccgacg atgtcatttg
     1141 ggcgatgtcg acgcgctccg agccggagaa tatcgatatc atccgaagat gttggagcgg
     1201 ccccctcgat ccggccatac ccaaagaacg caagggcttt aactcgcgcg cgatcatcga
     1261 cgccacgcgg ccctacgact ggcgcgacaa gtttccggcc gtcaacgccg tgagcgacga
     1321 cctcaaggcc gctctcgaca agaaatatgc gtccctgctc caacaggttt tcgatcgctc
     1381 gcattgagta acgccgtggc taaagaaagg gtgagagcgc aagaattcac gatagggagt
     1441 aactttccgg ggcaggtaaa caacaattgc acacggaaca ccgctgtgac tcgaaggagc
     1501 cgctcatgaa aaaactggtt cttttctcgc tcgcagctct cctgcccgca ggtttattcc
     1561 tgcagggcgc cgcacattcc cagccctacg ccttgaccct cggctacagc ggcatcgggc
     1621 tcaccaccga tcttcgccgc gtcatcgaac gtgacaaagt ttgggaaaag cacggcgtca
     1681 tcgtcaaagc gatctacttc aacagcggca gtctcatggc ccaggcgatg gccggcggca
     1741 gcatcacggc ctcggactct gatttgccgg cgatgctcaa tctcgccgtg tccggcgtat
     1801 cggacatgaa aaccatcgcc gtaacgatca accgcctcga acatatcttc gtcagccgca
     1861 aaaacatcac caaaccggaa gaacttaaag gcaagcggat cgccgtcagc cggctgggct
     1921 cggcctccga cctagtcacg cgcatggtac tgcgcacctg gaaagtcgat ccggaaaaag
     1981 aggtgaccct gttgcaggcg ggaaacacgc ccacgcgtat gtccgcgctg actgcgggcc
     2041 acgtcgatgc agcgctcatc agcccggaca gtctgca
//
LOCUS       DATIRS010001071         1592 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1851524, whole genome shotgun sequence.
ACCESSION   DATIRS010001071 DATIRS010000000
VERSION     DATIRS010001071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1592)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1592)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1592
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1851524"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1384
                     /locus_tag="VLM90_13615"
     CDS             <1..1384
                     /locus_tag="VLM90_13615"
                     /inference="COORDINATES: protein motif:HMM:NF013961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transglutaminase-like domain-containing protein"
                     /protein_id="HSQ14059.1"
                     /translation="RRQILAPPPLLTLRGTEKITEGSEYWWGIFYRGEKIGYASQSIV
                     PKIKGYKLTDFSRLNLNLLGTVQPAETRLEMEANDDWILERFDFALTAKEIGFRARGA
                     VKANKLILEVDSAGHRSAREITLTQAPYLLASLKPYVVTQQLETGKKFYFSTFDPSTL
                     SQQVTTIVSEGREQIHIGNRLEPAIKLRQSFGGISVLSWVDAHGRTLKEESPAGMSMT
                     RQSQQEAKNLPSRAVPLDMIAQSSIPVTKQIADATTLPAVELKLAGVNLANFALDGGR
                     QKLTGDRLEITREDLTKLSATAIPVKEPRLQTFLQPTAFMQSDHPSIKTLAARIVGTE
                     TNAMKAAVKLKDWVYRELAKEPTVSIPNALEVLQVKKGDCNEHTVLFNALARAAGIPA
                     KTVVGVVYLRGSFYYHAWSEAWLGRWVALDSVLNQFPADVTHVKFLEGEIDRQIDMLQ
                     LIGNLKIEVL"
BASE COUNT          367 a          507 c          425 g          293 t
ORIGIN      
        1 cagacgccag atcctcgcgc cgccgccgct gctgacgctg cgcggcacgg agaaaatcac
       61 cgaaggcagc gaatactggt ggggcatctt ttaccgtggt gaaaagatcg gctacgcctc
      121 ccagtcgatc gtgccgaaaa tcaaaggcta caagctcacc gatttttccc ggctcaattt
      181 gaatctgttg ggcaccgtcc agcccgccga gacccgcttg gaaatggaag ccaacgacga
      241 ctggatcctg gagcgtttcg atttcgccct caccgccaag gaaatcggct ttagggcgcg
      301 cggcgcggtg aaggctaaca agctgatcct ggaagttgat tctgctggcc accgctcggc
      361 gcgcgagatc accttgaccc aggcgcctta cctgctcgcg tcgctcaaac cttatgtcgt
      421 cacccagcaa ttggaaaccg gcaagaagtt ttatttctcg accttcgacc cgtcgaccct
      481 gtcgcagcag gtgaccacca tcgtcagcga aggccgcgaa cagatccaca tcggcaaccg
      541 cctcgaaccg gcgatcaaat tgcgccaaag tttcggcggc atttcggtgc tctcctgggt
      601 cgacgcccat ggccggacgt tgaaggaaga atcgccggcg ggcatgtcga tgactcggca
      661 gagccagcag gaagcgaaga atctgccgtc ccgcgccgtg ccattggata tgatcgcgca
      721 gtcgtcgata ccggtgacca aacaaatcgc cgacgccaca acgctcccgg cagtcgaact
      781 gaaactcgct ggcgtcaacc tggcgaattt cgcgctggac ggcggccggc aaaaactcac
      841 cggcgaccgg ctggagataa cccgcgaaga tcttaccaag ctcagcgcca cggcgattcc
      901 ggtcaaagag ccgcgtctgc aaactttctt gcaacccacc gcgttcatgc agtcggatca
      961 tccgagcatc aagacgctcg ccgcccgcat cgtcggcacg gaaaccaacg ccatgaaagc
     1021 ggcggtgaaa ctcaaagact gggtataccg cgaactcgcc aaagagccca ccgtgagcat
     1081 tcccaacgcc ctggaagtcc tgcaggtaaa aaaaggcgac tgcaacgagc acaccgtgct
     1141 gttcaatgca ctagctcgcg ccgccggcat cccggcgaaa accgttgtcg gcgtcgtcta
     1201 tctgcgcggc tcgttctatt atcacgcctg gtccgaagcc tggctcggcc gctgggtcgc
     1261 actcgattcg gtgctgaacc aattccccgc cgacgtcacc catgtgaaat ttctcgaagg
     1321 cgagatcgac cggcagatcg atatgcttca gctcatcggc aatctgaaaa tcgaagtctt
     1381 atgagctcgt gccgctccca atccgacaat ccaaaaccga aaattttatg attcaactca
     1441 tcaatctgag taagcactac ggcaaactcg ccgcggtgga taacttaaac cttgaagtcg
     1501 cgcccggcga gatcttcggc ttcctcggcc ccaacggcgc cggcaagacc acgtcgatcc
     1561 gctgcatgat gggtattgtc aaatcgacat cg
//
LOCUS       DATIRS010001072         2696 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1851553, whole genome shotgun sequence.
ACCESSION   DATIRS010001072 DATIRS010000000
VERSION     DATIRS010001072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2696)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2696)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2696
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1851553"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(200..1249)
                     /locus_tag="VLM90_13620"
     CDS             complement(200..1249)
                     /locus_tag="VLM90_13620"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14060.1"
                     /translation="MPRLPSVISTGAGIQIRRQWQYVLIVALVLLLRLSVQAEAAAQS
                     IPLRYGQAISAAKSIFSLPIFVGEREGFFRRAGLNFKIIIPIPGGSDKMIDALHDDTV
                     DVTHVAVPFLIRAALNGSDAVAVAAEFTNPIYSLVVKPEIKNFADLKGRLIGLADEAG
                     TISISTRRLLALHGVNKDDFRVKIIEGTPTRWNCLKRGECDAVPLGQPQDLIARKEGF
                     RVLGVSNDAVPDFLYTVTAVRRSWAEKNRDVVVRYIRALGATFKFIRDPANRNSVVKT
                     IVETTDTPADVAQQTLALFFEPERHVLPVQGEINVNGLGQVIAFMAEAGLLKQPLPSA
                     ERFVELKYLQAAGVK"
     gene            complement(1287..1697)
                     /locus_tag="VLM90_13625"
     CDS             complement(1287..1697)
                     /locus_tag="VLM90_13625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HSQ14061.1"
                     /translation="MKSPTVRANLAATLFAYLLLALSSAAWAGGEAGEDDHNHDDGPN
                     YFGFVKDTSGKTIRDAKVTADIKGRPSIVARTNAAGAYRIPGFGKDIAPANVTISCAK
                     EGYKQAKTLLKTRPSKTPPTAVEIECTMQRIGAK"
     gene            2242..2553
                     /locus_tag="VLM90_13630"
     CDS             2242..2553
                     /locus_tag="VLM90_13630"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative quinol monooxygenase"
                     /protein_id="HSQ14062.1"
                     /translation="MIILHVTIQVKPEHVAEFLEVVRYDAEHSEKDEAGCLRFDVVQD
                     RDDANRFYFYEVYRDEAALAAHRETPHFKYYAEKTQPWLAAPPERRFGKNLIPADAAW
                     R"
BASE COUNT          571 a          697 c          838 g          590 t
ORIGIN      
        1 cgtcgcgcaa tctaaaaatt tctaccggcg attgcgactg gtgaaatgca cgaacaaaaa
       61 aaatgactcg cgccagacac gcaaagggat gagaaacatg tcctttcgac ccctgaaact
      121 gaactttccc atcgatagga caatttatca ttgatgcgcg tgcaagtttg cgcagatgag
      181 ccgctttttt acttgggcgc tattttacgc cggcggcctg aagatacttg agttcgacga
      241 agcgctcggc gctaggcaag ggctgtttca acaagccggc ttcagccatg aaggcgatta
      301 cttggccgag gccattgacg ttgatctcgc cttgcacggg caggacatgt cgctcaggtt
      361 cgaaaaacag cgcgagggtt tgctgggcga cgtcggcggg ggtgtcggtg gtttcgacga
      421 tggttttcac gaccgaatta cggttggccg gatcgcggat gaacttgaac gtggcgccga
      481 gcgcgcgaat gtagcgcacc acgacatcgc gatttttctc cgcccaggag cggcgcacag
      541 ccgtcacggt gtagagaaag tctggcacgg cgtcgttgga aactcccagg acgcggaatc
      601 cttctttccg ggcgatcaag tcctgcggct ggccgagcgg cacggcgtcg cactcgccgc
      661 gtttgagaca gttccagcgc gtcggcgtgc cctcgataat tttaacgcga aaatcgtctt
      721 tgttgacgcc gtgcagcgcc agcaatctgc gggtcgagat tgaaatcgtc ccagcctcgt
      781 cggccaggcc gattaatcta cccttgagat cggcgaagtt tttgatttcc ggtttgacca
      841 ccagactgta gatcggattg gtgaactcgg cggcgacggc gaccgcgtcg gagccattga
      901 gcgccgcgcg aatcaaaaac ggcacggcga catgggtgac atcgacggtg tcgtcatgca
      961 gtgcgtcgat cattttgtcc gaaccgccgg gaatcggaat gataatttta aaattcaaac
     1021 cagcgcgacg aaagaaacct tcccgttcgc cgacgaagat cggtagtgag aagatgcttt
     1081 tggccgcgga aatcgcctgg ccgtagcgca gtggaatgga ttgcgcggca gcttcggcct
     1141 gaacactgag ccgtagaagc aagacgagcg cgacaatcaa gacgtactgc cattgacggc
     1201 gaatctggat tcccgctccc gtggaaatga cggatggcaa ccggggcatg gcggagtttc
     1261 agcgcggcgt cggatcgtga tcgcggctat ttcgcgccga tccgctgcat ggtgcattcg
     1321 atctcgacgg cggtgggcgg ggttttgctc gggcgcgtct tgagcagcgt tttggcttgt
     1381 ttatagcctt ctttggcgca ggagatggtt acgttggcgg gcgcgatatc tttgccgaaa
     1441 ccggggatgc gataagcgcc ggcagcattg gtgcgagcga cgatggatgg cctgcctttg
     1501 atatcggcgg tgactttggc gtcgcgaatg gtcttgcccg aggtatcctt gacgaagccg
     1561 aaataattgg gcccgtcgtc gtggttatga tcgtcctcgc cggcttcgcc gccggcccac
     1621 gccgcgctgg aaagagccaa aagcaaatat gcgaaaagag tggcggcaag attggcgcgg
     1681 acggtaggtg atttcataaa catccccatt ttcaatcggc agttctcgaa gtttttatcg
     1741 caagataaag ctcctgagta gataggcgaa atttatcatg acgagcgacg ggatcaacca
     1801 cgaccacagc ggcccgatgc gtgctgaccg cgtcccgtag ccaccaagcc gccgcgttga
     1861 tccgtgcgcc gagtagtcgt gacgtgggat gcggtcgaca ccgcactcat gtgccggatg
     1921 aacgaatcgg ggcccggtcg agccggcagc cggacgccac tggcctggtg cgtaatggcg
     1981 ccgagtagag cgacggcgag caggccgtgg attgtgagga gtacgatcat catggggaac
     2041 ccgcttttgc ttgtcattta ctccatgtcg cgggtggttg tccagtcggt ttaacaaacg
     2101 gcgcgatact ggacaagatc gagtagctga gatagcaagg gggcaagcgg cggtcggcag
     2161 tcagaagtca gaggtcggca gtcagaaatg tccactactc tctactacta actccttgat
     2221 cgattctagc gggaggttgc gatgattatt ttgcatgtga cgattcaagt gaagccggag
     2281 catgttgcgg agttcttgga agtggtccgc tacgatgccg agcattcgga aaaggatgag
     2341 gccggctgcc tgcgcttcga cgtggttcaa gaccgcgacg atgccaatcg attctatttc
     2401 tatgaagttt atcgcgatga ggcggcgctc gcggcgcacc gcgagacgcc gcacttcaag
     2461 tattacgccg agaagacgca gccttggctg gccgcgccgc cggagcgccg cttcggcaag
     2521 aatttgattc cggctgacgc ggcatggcgt taactgatta tttctcagcg atgcaggcgg
     2581 aactttaggt caactttgtc acggctcgta acgtcacagt ccaatgggag gtcgcatgaa
     2641 agtatcacgg cgttgctctg ttctcggcag tttatttttt gtcctggcca tgtatt
//
LOCUS       DATIRS010001073         2020 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1753710, whole genome shotgun sequence.
ACCESSION   DATIRS010001073 DATIRS010000000
VERSION     DATIRS010001073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2020
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1753710"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            285..1934
                     /locus_tag="VLM90_13635"
     CDS             285..1934
                     /locus_tag="VLM90_13635"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSQ14063.1"
                     /translation="MIDGVVRFPPEFAARYRAKGYWEDRSLRDTFDELFARHAERVAV
                     IDRDQAVTYAQIDQRSTCLALNLLDEGLAPLDRVVVQLPNVVEFVYLYCALQKIGAIP
                     IMALPTHRFREISQFIELSGAVACATPDQTKDFDYRDLVRRIRPASKTLRLGIILGDA
                     PEGYLSLTTLIERPSKRAPGELREIAIDPEDPALFQLSGGTTGIPKLIPRSHNDYVYN
                     SKMAAAVTGVGPDRVMLSVLPLAHNLPLACPGIQGYFLHGAKVVLANSTRSEDIFALI
                     ERHRVSHIAVVPALLIRLINDPSIARYCLSSIRVIQSGGQRLQPEVRRRTKELIPSVF
                     VQENFGMAEGMLMFSRADDPEDVRLETVGRPVSPDDEVRLVDDDDNQVAPGEVGELLA
                     RGPYTLRGYFGVPEYNARAFTADGFYRSGDLMRRHPSGNYMVEGRKKDLINRGGEKIS
                     AEEIENLILTHPAVQNVACVPMPDPILGERMCAYVILRAGTALTLPELVTFLMNEEIA
                     KHKLPERLEIVDDFPLSPFGKVSKKDLTERITLKLKEESKP"
BASE COUNT          442 a          619 c          544 g          415 t
ORIGIN      
        1 ggcttgatgg cgcgccgagc gaaatacacg ccgctcaatc gctgctgcac cgaagacgat
       61 gtcgccgaca gcatgcttag cctcatccta cacaaccgct tcgtcaccgg cgagatcatt
      121 atcgtcgacg gcggcttttc gagcacgaca tagcccgcct ctcggcggga tttcaaattt
      181 caaatctcaa atggcatata taagaatcca gcctagtcac cgtaaatttt agattatgaa
      241 atctgaaatt tggaatatga gattccgagc gcagcgagga ccggatgatt gacggtgtcg
      301 tccgctttcc acccgagttc gccgcgcgct accgcgctaa gggttattgg gaagatcgct
      361 cgctacgcga tactttcgat gaacttttcg cccgccacgc ggaacgtgtc gccgtcatcg
      421 accgggatca agccgtcacc tatgcgcaaa tcgaccaacg ttcgacctgc ctggcactca
      481 atctcctcga cgaagggctc gcgccgctcg accgcgtggt ggtgcagctg cccaacgtcg
      541 tcgaattcgt ttatctctac tgcgccttgc aaaaaatcgg cgcgattccg atcatggcgc
      601 tgccgaccca ccgatttcgc gagataagcc aattcatcga gctctccggc gccgtcgcct
      661 gcgccacgcc ggaccagacc aaagacttcg actaccgcga cctcgtgcgg cgcattcgcc
      721 cagcgagcaa aactctgcgc ttgggaatta ttttgggtga tgcgccggag ggttatttat
      781 ctctgaccac gctcatcgag cggcccagca agcgcgcgcc cggcgagttg cgtgagatcg
      841 ccatcgatcc cgaagatccg gcgctcttcc aactctccgg cggcaccacc ggcattccca
      901 agttaattcc acgctcgcac aacgattatg tttacaattc gaaaatggcc gccgctgtga
      961 cgggcgtcgg ccccgaccgg gtgatgctga gcgtgctgcc gctggcgcac aatctgcccc
     1021 tcgcctgtcc cggtatccaa ggatatttct tgcacggcgc caaggttgtt ctcgccaact
     1081 cgacccgcag cgaggatatc ttcgcgttga tcgagcgcca ccgcgtgagt catatcgccg
     1141 tcgtgcccgc gctgttgatc cgcttgatca atgatccgtc aatcgcaaga tactgccttt
     1201 cttcgatccg cgtcattcag agcggcggcc agcggctgca accggaagtg cgccggcgga
     1261 ctaaagagtt aattcccagc gttttcgtgc aggaaaattt cggcatggcc gaaggcatgc
     1321 tgatgttcag ccgtgccgac gatcccgaag atgtgaggct tgaaacggtc ggccggccgg
     1381 tgagccccga cgacgaagtg cggctagttg acgacgacga taaccaagtg gcgccggggg
     1441 aagtcggcga gctgctcgcc cgcgggccgt acaccctgcg cggctacttt ggcgtgcccg
     1501 agtacaacgc cagagcgttt accgccgacg gtttttaccg ttccggcgat ctcatgcgcc
     1561 gccatccctc cggcaactat atggtggaag gacgaaaaaa agatttgatc aaccgcggcg
     1621 gcgaaaaaat cagtgccgag gagattgaaa atctcatact cactcatccc gccgtgcaaa
     1681 acgtcgcctg cgtgccgatg cccgatccga ttctcggcga gcgcatgtgc gcctatgtga
     1741 tcctgcgcgc cggcaccgct ctaaccttac cggaactcgt caccttcctc atgaacgagg
     1801 aaatcgccaa gcataaactg ccggaacggt tggagatcgt cgacgatttt ccgctatcgc
     1861 cattcggtaa ggtgtcgaaa aaagatttga ccgagagaat tacgttaaag ctgaaggaag
     1921 aaagcaaacc ttgagaatca tcgacctaca ctgctatccc aacaccgaac catggatcaa
     1981 gtctcaaggt ccctacgtcg aggcgctggc gaaatattgg
//
LOCUS       DATIRS010001074         1904 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_475239, whole genome shotgun sequence.
ACCESSION   DATIRS010001074 DATIRS010000000
VERSION     DATIRS010001074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1904
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_475239"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..332)
                     /locus_tag="VLM90_13640"
     CDS             complement(<1..332)
                     /locus_tag="VLM90_13640"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HSQ14064.1"
                     /translation="MPDYKEILYEKQRGGALITLNRPEAMNAISRSMIKEIHKALDDV
                     EHDPEVRAVVLTGAGRAFSAGMDQGNASGRRRDLHWPYGIVTGETAASVIDSWRADPR
                     NFRRMWEFG"
     gene            complement(448..1389)
                     /locus_tag="VLM90_13645"
     CDS             complement(448..1389)
                     /locus_tag="VLM90_13645"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14065.1"
                     /translation="MILPALVSAQSKPLKELRVPYALGGSTGFFWIAHKSGAFEKYGL
                     KVLPIFMRGGREAVQALISRDVSVMQQGSSGVITAWAQGAKDLVAIGATGNKLDYIFV
                     STPAIKKPADLKGKRIAISQLGASTDFIARIALRQLGLSDKEVTLVSLGAQGERWAAL
                     AGGHVDASLFQPPVTLRARKLGMPIWIDFAKIDYEYVTAGPVTTRSYIKAERETVMNF
                     MRGLADGMEFYRDERNKDTVIKYLGEFYRSTNTEELEETRRVYSQVSSGLPVVTVKAM
                     ENMIASDRVLSAANVNPMDVLDLSFLKQLEEERRTRK"
     gene            complement(1554..>1904)
                     /locus_tag="VLM90_13650"
     CDS             complement(1554..>1904)
                     /locus_tag="VLM90_13650"
                     /inference="COORDINATES: protein motif:HMM:NF024938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HSQ14066.1"
                     /translation="VEMILGVKRDPLFGPVVLCGLGGVLVEVLQDVAIGIPPLSRQQA
                     KDMIRRLRGAAILGGVRGKPPADIDALCDAIVGLANLAVSLGAQLNGVDINPLIVLAK
                     GQGVVAVDALVEIQ"
BASE COUNT          381 a          546 c          564 g          413 t
ORIGIN      
        1 ccgaactccc acatgcggcg gaagttgcgc ggatcggcgc gccaagagtc gatgacactg
       61 gcggcggtct caccggtgac gatgccgtaa ggccaatgca gatcgcgccg ccgccccgac
      121 gcgttgccct gatccatgcc ggccgagaag gcgcgtcctg cgccggtgag cacgacggcg
      181 cgcacttccg gatcatgctc gacgtcatcg agggccttgt ggatttcctt gatcatgctg
      241 cggctgatgg cgttcatcgc ctcggggcga ttgagcgtga tcaaagcgcc gccgcgttgc
      301 ttctcatata agatttcttt gtagtcgggc atccgggctc ctttgttcaa gtcgttcaag
      361 ccgttcaaaa cgttcaaatc gccggacgtg tctggaaaac gatttgaacg gcttgaacgg
      421 agcgaagcga ttgaacggtt tgaacgatca ttttctggtt ctccgctctt cctccaactg
      481 ttttaggaac gacaggtcga ggacgtccat tggattcaca ttcgccgccg acagcacgcg
      541 gtcgctggcg atcatgtttt ccatcgcttt gaccgtcacg accggcaagc cggacgaaac
      601 ctggctgtaa acgcggcggg tttcttccag ctcttcggta ttggtcgagc ggtagaattc
      661 gcccaggtat ttgatcacgg tgtctttatt cctctcgtcg cggtaaaact ccatgccgtc
      721 agccaggccg cgcatgaagt tcatcaccgt ttcacgttcg gctttgatgt aggatcgagt
      781 cgtcacaggt ccggcggtga cgtattcata atcgattttc gcaaaatcga tccaaatcgg
      841 catgcccaac ttgcgcgcgc gcagcgtgac cggcggttga aacaacgagg catcgacatg
      901 gccgccggcg agcgcggccc aacgctcgcc ttgagcgccg agactgacca gcgtcacttc
      961 tttgtcgcta agtcccagtt ggcgtagagc gatgcgggca atgaaatcgg tgctggcgcc
     1021 gagctggctg atagcgatcc gtttgccttt caaatctgcg ggttttttga tcgccggtgt
     1081 ggagacgaag atgtaatcga gcttattgcc ggtggcgccg atggctacca agtctttagc
     1141 gccctgggcc caagccgtga tgacgccgga acttccttgc tgcatgaccg agacgtcgcg
     1201 cgagatcagc gcttgcaccg cctcgcgtcc gccgcgcatg aagatcggca ggactttgag
     1261 gccgtatttt tcaaaggccc ccgatttgtg cgcgatccaa aaaaagccgg ttgagccgcc
     1321 gagggcgtag gggacgcgga gttctttgag cggtttggac tgggcagaga cgagggcagg
     1381 aagaatcaat ccgattgtca gactcagtat gatcaaccgc gccttcccca tttggaaaag
     1441 ggggatcgag ggggattttg ctgtgcgagt tttcaaaatc ccccctagcc ccccttttgc
     1501 caagggggga atatgcagaa gaggggataa atgcgaaatt tttgaaggca tgctcattga
     1561 atctccacca gcgcgtcgac ggcgaccacg ccctggcctt ttgctaacac gatcaacgga
     1621 ttgatgtcta cgccattcaa ctgagcgccg agactgaccg ctagatttgc caagccgacg
     1681 atggcgtcgc acagcgcgtc aatatctgcg ggcggcttgc cgcgcacgcc gccgaggatc
     1741 gcggcgccgc gcaaccgccg gatcatgtct tttgcttgtt gtctcgacaa tggcgggatg
     1801 ccgatggcga catcctggag cacttcgacg agaactccgc ccaagccgca tagcaccacc
     1861 ggaccgaaca gcggatcgcg tttgacgccg aggatcatct cgac
//
LOCUS       DATIRS010001075         2062 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1556953, whole genome shotgun sequence.
ACCESSION   DATIRS010001075 DATIRS010000000
VERSION     DATIRS010001075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2062
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1556953"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..975)
                     /locus_tag="VLM90_13655"
     CDS             complement(<1..975)
                     /locus_tag="VLM90_13655"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HSQ14067.1"
                     /translation="MEDGGCKIAILDPRSAILAMGFLPMSLLEIRNLKKHFPVGEGLF
                     SRGKGAVKAVDGVNLSIEEGETLGLVGESGCGKSTLGRTILRLIEPTSGEINFLGKNL
                     LSMSQRELRDTRREMQIIFQDPYASLNPRMRVGDIVGEGLEIHKLAKGKAKRERVMEL
                     LHQVGLREDHFDRYPHEFSGGQRQRIGIARALAVSPKFIVCDEPVSSLDVSIQAQIIN
                     LLQELQEKMHLTYLFISHDLRVVEHISHRVAIMYLGKVVEIAKSETIYRDAKHPYTRA
                     LLSAVPIPDMSKKKERVVLEGDVPSPVNPPPGCTFHPRCAYREAACSQI"
     gene            complement(982..1983)
                     /locus_tag="VLM90_13660"
     CDS             complement(982..1983)
                     /locus_tag="VLM90_13660"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ14068.1"
                     /translation="MAHLLQVKNLQTSFFTPEGEVRAIDGISFEIDESKTLGLVGESG
                     CGKSVTSLSIMRLIPSPPGKIVGGEIVYRGKDLLKLGNEEMRKIRGNEISMIFQEPMT
                     SLNPVFTVGNQIGEAIKLHQGLNKQATRAKSIEMLRLVKIADPESRVDAYPHQLSGGM
                     RQRVMIAMALSCNPSLLIADEPTTALDVTIQAQILDLMKELQQKIGMALLLITHDLGV
                     VAEQADEVAIMYAGKMVERSNTREIFTKPFHPYTVGLLNSLPRTGGAKRHRLDAIPGV
                     VPNPLHLPSGCRFRDRCPKAADLCAQTEPELVEKEPGHTVACHFPHSETRSGVNAEV"
BASE COUNT          415 a          604 c          609 g          434 t
ORIGIN      
        1 gatctggctg caggcggctt cgcggtaggc gcagcgcgga tggaaggtgc agccgggcgg
       61 tggattgacc ggactcggca catcgccttc aagcaccacg cgctcttttt tcttgctcat
      121 gtcggggatc ggcacggcgg agagcagcgc ccgggtataa ggatgcttgg cgtcacggta
      181 tatcgtttcg ctcttggcga tctcgacgac cttgccgaga tacatgatgg ctactcgatg
      241 gctgatatgt tcgacgacgc gcagatcgtg ggagatgaac agataagtca aatgcatctt
      301 ctcttgcaat tcctgcaaca gattgatgat ctgcgcctgg atcgacacat cgagagacga
      361 caccggctca tcgcagacga taaatttggg actgaccgcc aaggcgcggg cgatgccgat
      421 gcgctggcgc tggccgccgc tgaactcatg aggatagcga tcgaagtgat cctcacgcag
      481 accgacctgg tggagcaact ccatcacccg ttcgcgcttg gctttgccct tggcgagctt
      541 gtgaatctcc aatccctcgc cgacgatgtc gccgacgcgc atgcgcgggt tgagcgaggc
      601 gtagggatct tgaaagataa tctgcatctc gcgccgggtg tcgcgcagct cgcgctgcga
      661 catcgacagt aaatttttgc cgagaaaatt gatctcgccg gaggtcggct cgatcaagcg
      721 cagaattgtc cgcccgaggg tcgatttgcc gcaacccgac tcgccaacca agccgagcgt
      781 ctcgccctct tcgatcgaca aattgacgcc gtcgaccgcc ttgacggcgc ccttgccgcg
      841 cgagaacagt ccttcgccga ccgggaagtg tttttttaag ttgcggattt ctagcaagct
      901 catcggcaaa aatcccatgg cgaggatagc ggatcgagga tcgaggatgg cgatcttgca
      961 tcctccatct tccatcttcg attaaacttc cgcattgacc cccgacctcg tctcggaatg
     1021 cggaaaatga caagccaccg tatgccccgg ctctttctcc accaactcgg gttcggtctg
     1081 ggcgcagaga tcggcggcct tcgggcagcg atcgcggaag cggcaaccgc tcggcaaatg
     1141 gagcgggttg ggcaccacac cggggatcgc gtccaagcga tgccttttcg cgccgccggt
     1201 gcgcggcaag gagttgagca ggcccacggt ataaggatga aacggcttgg tgaaaatctc
     1261 ccgcgtgttc gagcgctcga ccatcttgcc ggcgtacatg atcgcgactt cgtcggcctg
     1321 ctcggcgacc acgccgaggt catgggtgat caacaacaga gccatgccga tcttctgctg
     1381 caactctttc atcagatcga ggatctgcgc ttgaatcgtc acatcgaggg cggtggtcgg
     1441 ctcatcggcg atcaagagcg aaggattgca cgacagcgcc atggcgatca tcacccgctg
     1501 gcgcatgccg ccgctcaact gatgcggata ggcatcgacg cgggattcag gatcggcgat
     1561 cttcaccagc cggagcattt cgatggattt cgctcgagtc gcctgcttgt tcagcccttg
     1621 gtgcagcttg atcgcttcac cgatctgatt gccaacggta aaaaccggat tgagcgaggt
     1681 catcggctcc tggaagatca tcgagatctc gttgccgcga atcttgcgca tctcctcatt
     1741 accgagcttg agcagatctt tgccgcggta gacgatctcg ccgccgacaa ttttccccgg
     1801 cggcgacggg atcaaccgca tgatcgacaa cgaagtgacg ctcttgccgc agccggactc
     1861 gccgaccagc ccgagcgtct tgctctcgtc gatctcgaag ctaatgccgt cgatggcgcg
     1921 tacttcgcct tccggtgtga agaaagaagt ctggaggttt ttgacctgga gtagatgcgc
     1981 catggtgaca aagtcgcgtc tgggttaact cacgttgtac ggcctccgcg cagccgattc
     2041 aacatgcgcg ggtccaaaat at
//
LOCUS       DATIRS010001076         4048 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1065456, whole genome shotgun sequence.
ACCESSION   DATIRS010001076 DATIRS010000000
VERSION     DATIRS010001076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4048
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1065456"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..828)
                     /locus_tag="VLM90_13665"
     CDS             complement(<1..828)
                     /locus_tag="VLM90_13665"
                     /EC_number="3.1.3.1"
                     /inference="COORDINATES: protein motif:HMM:NF012470.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase"
                     /protein_id="HSQ14069.1"
                     /translation="MFLFLADGAGPAHLEIARQYSRQIHNEGFAIVDKIMKEGSVGVM
                     TTDAADFLSTDSAAAATALAGGCKANVGALGVCADGTPAVSAMELARRRGMRLGLVTN
                     SVVYDASPAAFVCHVTNRRDYAAIVNRYLELEPYVLMGGGKDQFLPKSQTGSRRADET
                     DMVAAFEKKGYRYSSNKPDLERATGGKTLGLFSLRDMSFELDRDKNSEPSVYDMTRAA
                     IKLLHDRNQNGFFAFIESENIDSAGHLSDIASVIQDYREFDRAVGLAYEFYRKYPRDT
                     "
     gene            complement(960..1670)
                     /locus_tag="VLM90_13670"
     CDS             complement(960..1670)
                     /locus_tag="VLM90_13670"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HSQ14070.1"
                     /translation="MTRSHILAWLVHLYTASGAVVGLFTVLYLEQSNFKGAFLLMALA
                     VFIDASDGALARSARVKELIPWFDGDILDAIVDYFNYVIVPCLFLLHADLLPTADALW
                     LAALPLLASAYGFCQKDAKTADHFFLGFPSYWNIVVFYLFVLKTPLWINAFLIIALSI
                     LVFVPIKYIYPSRSPRFRGSVTLLGGLWGIAVLWIIFTLPEPPRSLLFASLVFPAYYT
                     ALSLWLEIRRMTTPSAKG"
     gene            complement(1679..2287)
                     /locus_tag="VLM90_13675"
     CDS             complement(1679..2287)
                     /locus_tag="VLM90_13675"
                     /inference="COORDINATES: protein motif:HMM:NF012273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HSQ14071.1"
                     /translation="MIKLYTFPPSTNSRKVRIALVEKGLEFERINVDLTKREQKNPEY
                     LKIHPFGQVPALDDEGFIIYDSTIINEYLEDEYPYPALMPSESEGRARARLLEDYRDT
                     HFNPYFVHIIQEMRKPEGERDAQRIDDAKAEITKCLDRIERELQGKEYLVGPFSLADV
                     AFMSNVELLDRFNVPVDGAKYRNTVAWIARLKARPSFAASAT"
     gene            complement(2410..>4048)
                     /locus_tag="VLM90_13680"
     CDS             complement(2410..>4048)
                     /locus_tag="VLM90_13680"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HSQ14072.1"
                     /translation="IAKEFAQYGLKAAGDDNSYFQSFDVAVGVDVKEPSRLDLGDNRA
                     PALREDWIPLGFSASGRTEAEVVFAGYGITAKDYGYDDYAGIDAKGKIVLVLRYEPPP
                     KNEKSPFKKFPGFSIHSALRTKANNARDHGAVGMILVDLNHSGDEKAELLSTRASLWR
                     GGNSLLGAQLKRRVAEQWLADRDVSLQALKESIDREEKPSSMPLAGAKVVLQVTLEEN
                     RRSTDNVVAVLPGSDPNSKDEYVVIGAHYDHLGFGEFGALTAQAQGRIHHGADDNASG
                     TAVLLDLARRLSQLQLKPARSIVFVAFSAEELGLYGSRHFVERWPAIASTKAMVNLDM
                     VGRLRDNRLTVFGARSGKDLSAIVGAGARQLGLDIHESDGVGRSDHMSFYNKKIPVLH
                     FFTGTHPDYHRPTDTWDKLNIEGMGKVSDLVLASVLRIANARETINFVSLPARPPATE
                     MGQRRGGAGAYLGSIPDYGVNAEGVVLTGVTEGSPAARAGLRQGDVIIELAQKKIMNI
                     EDLTDALGSHKPGDEIAIVVRRAGQPMTVKAILSSRG"
BASE COUNT          855 a         1114 c         1241 g          838 t
ORIGIN      
        1 tgtgtcgcgc gggtattttc ggtaaaactc ataggccagt ccgacggcac ggtcaaactc
       61 gcgatagtct tgaatcaccg aagcaatgtc ggaaagatgt ccggcgctgt cgatattctc
      121 cgactcgata aaggcgaaga agccgttctg gtttcggtcg tgcaagagct tgattgcggc
      181 gcgtgtcatg tcgtagacgg acggttcgct gttcttgtcg cggtccaatt cgaagctcat
      241 gtcgcgcagg ctgaagagcc cgagcgtttt cccgcctgtg gcgcgttcga gatccggctt
      301 gtttgacgaa tagcgataac ccttcttctc gaaggccgcg accatgtcgg tttcatcggc
      361 gcgccggctg ccagtctgac tcttcggcaa aaactgatct ttcccgccgc ccatcaacac
      421 atacggttcc aactctagat accgattgac gatcgcggcg tagtcgcggc ggttggtcac
      481 gtggcagacg aacgcggcgg gactggcgtc gtagacaacg gagttggtga cgaggccgag
      541 ccgcataccg cgccggcgcg cgagttccat ggcgctcacc gctggagtgc cgtcggcgca
      601 aacgccgaga gcgccgacgt tggctttgca gccgccggca agggcggtgg ctgccgcagc
      661 cgaatcggtg gataagaagt ccgccgcgtc ggtggtcatg acgccgacgc tgccttcttt
      721 catgatctta tcgacgatcg cgaaaccttc gttgtgaatc tgccggctgt attgccgcgc
      781 tatttccaga tgggccgggc cggcgccgtc cgccagaaat aagaacacat actttggagc
      841 gcccgtggcg ggtcgaattt gcgccggtga caacgacgcc gcgattgaca gaacaatcag
      901 aacgagagcg gctgtgaaaa agcgcgcggg gagcttattt cgaagcagac gaaacatatt
      961 caacctttcg ctgacggcgt tgtcattcta cgaatctcga gccaaagcga cagcgccgta
     1021 tagtaggctg gaaaaacgag cgaggcaaac agcagacttc gtggcggctc gggcagcgtg
     1081 aagataatcc atagaacggc aatcccccag agtccgccta aaagggtcac cgagcctcga
     1141 aagcgtgggc tgcggctcgg atagatgtat ttgatcggaa cgaagaccag gatcgacaag
     1201 gcgataatga gaaaggcgtt gatccagagc ggcgttttga gcacgaaaag ataaaacacc
     1261 acgatgttcc aataggaggg aaagccgaga aaaaaatggt cggcggtctt ggcgtccttc
     1321 tggcagaagc cgtaggcgct ggcgagcagc ggcagggcgg caagccagag cgcatccgcc
     1381 gtcggtaata aatcggcgtg cagcagaaac agacagggaa cgatgacgta gttaaaataa
     1441 tcgacgatgg cgtcgaggat atctccgtcg aaccagggga tgagctcttt gacgcgggcg
     1501 gaccgggcca gggcgccgtc ggaggcgtcg atgaaaaccg ccagggccat caacaagaac
     1561 gcgcccttga aattgctttg ttcgagatag agaacggtga agaggccgac cacggcgccg
     1621 ctggcggtgt agagatggac gagccaggcg aggatgtgac tcctggtcat ccggcggctt
     1681 aagtggcgga ggcggcaaaa ctcggtctgg ctttaaggcg ggcgatccag gcgacggtgt
     1741 ttctatattt ggcgccgtcc acgggcacgt tgaaacggtc caagagctcg acgttggaca
     1801 tgaacgcgac gtcggctaag ctaaacgggc cgacgagata ctctttgcct tgcagctctc
     1861 tctcgatgcg atctaaacac ttggtaattt ccgccttggc gtcgtcgatg cgttgggcat
     1921 cccgttcgcc ttcgggcttg cgcatttcct gaatgatatg gacgaaatag ggattgaaat
     1981 gggtgtcgcg atagtcttcc aataaacgcg cccgcgcccg gccttccgat tcgctcggca
     2041 tcagcgcagg atagggatac tcgtcttcga ggtattcatt tataatggtc gagtcgtaaa
     2101 taatgaaacc ttcatcgtcg agcgcgggga cctggccgaa agggtgaatt tttaagtatt
     2161 ccgggttctt ttgctccctt ttggtaagat caacgttgat ccgctcgaac tcgaggccct
     2221 tctccacgag ggcgatccgc accttgcggg agttggtcga gggcggaaag gtatacaact
     2281 tgatcatcga cagcaatcct ccttgaacct cacaactttg tgcatactaa cataaggtta
     2341 caactgctgc gagcattatt ttcgcaattc aggcaaactt ctgccaaaaa aggcggggcg
     2401 aagtgcggat cagccgcgcg agctaagaat ggctttgaca gtcatcggct ggccagcgcg
     2461 gcggactacg atagcgatct cgtcgccagg tttatgactt cctagggcgt cggtaaggtc
     2521 ttcaatattc ataatttttt tttgcgcaag ctcgataatc acgtcgccct ggcgtaagcc
     2581 ggctcgcgcc gccgggctgc cttccgttac gccggttaaa acgactccct cggcgttgac
     2641 gccgtaatcg ggaatgcttc cgagataagc gccggcgccg ccgcgtcgtt gacccatttc
     2701 cgtcgccggc gggcgcgcag ggaggctgac gaagttgatc gtctctctgg cattggcgat
     2761 gcgcagcacg gaagccaaga cgaggtcgct cactttgccc atgccttcga tgttgagttt
     2821 gtcccaggtg tcagtgggcc ggtggtagtc gggatgggtg ccggtgaaaa aatgcagcac
     2881 gggaattttc ttgttgtaaa acgacatatg atcgctccgc cccacgccgt cagactcgtg
     2941 gatgtcgagg ccgagctgtc gcgcgcccgc gccgacgatg gcgctcaagt cttttcccga
     3001 gcgagcgccg aacacggtca agcggttgtc gcgcaagcgc ccaaccatat caaggttcac
     3061 catcgccttg gtcgacgcga ttgcaggcca acgttcgaca aaatggcgcg agccgtagag
     3121 acccaactct tcggcggaaa aggcgacaaa gacaatggaa cgcgccggtt tcagctgcag
     3181 ctggctcagc cggcgcgcca gatcgagcaa cacggcggtg ccggaggcgt tgtcgtcggc
     3241 gccgtgatga atgcgcccct gcgcttgtgc cgtgagggcg ccgaactcgc cgaagccaag
     3301 atggtcgtag tgcgcgccga tgacgacgta ttcgtctttc gaattaggat cggagcccgg
     3361 caagaccgcg accacattat cggtggatcg gcggttctct tccaaggtca cctggagaac
     3421 gactttcgcg ccggcgagcg gcatcgacga gggtttctct tcgcggtcga tactttcctt
     3481 gagcgcctgg agcgatacgt ctcgatcggc gagccactgc tccgcgacgc ggcgcttcaa
     3541 ttgggcgccg agcaggctgt tgccgccgcg ccacaggctc gcgcgcgttg acaatagctc
     3601 cgctttttca tcgccgctgt ggttgagatc gactagaatc atccccacgg cgccgtgatc
     3661 gcgggcgtta ttcgccttgg tgcgaagtgc ggaatgaatc gaaaagccgg gaaatttctt
     3721 gaacggactt ttttcattct tcggcggcgg ctcgtagcgc agcacgagaa caatcttgcc
     3781 tttggcgtcg atgccggcgt agtcgtcgta gccgtagtcc ttggcggtga tgccgtaacc
     3841 ggcgaaaacc acttcggctt cggtccggcc ggaggcggaa aagccgagcg ggatccaatc
     3901 ctcgcgcaac gccggcgcgc gattatcccc gaggtcgagt ctgctcggtt cctttacgtc
     3961 gactcccacc gcgacatcga agctttgaaa ataactgttg tcatcacccg cggctttcaa
     4021 gccatactgg gcaaattctt tggcgatg
//
LOCUS       DATIRS010001077         2887 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1948314, whole genome shotgun sequence.
ACCESSION   DATIRS010001077 DATIRS010000000
VERSION     DATIRS010001077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2887)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2887)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2887
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1948314"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..511
                     /locus_tag="VLM90_13685"
     CDS             <1..511
                     /locus_tag="VLM90_13685"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HSQ14073.1"
                     /translation="GAGSWLSLFTHITLASETAVFAQPEVRHGSNTSFMWTLLGGYKN
                     ALRYGLTGDHIDAQEALRIGLVVKVVPPDQLIDECFKIVERIAHVPPETVKINLQVAT
                     MGLDMMGLRDALTLDNHLSAPAHVMLREEFRKPLDDARANKGIREYLQMRDGPFQPEP
                     FGPRAKKRD"
     gene            565..1446
                     /locus_tag="VLM90_13690"
     CDS             565..1446
                     /locus_tag="VLM90_13690"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HSQ14074.1"
                     /translation="MAQYQTILYQKQRKGVLITLNRPNALNAMNQEMMNELDAALAEA
                     EKDAEIRAVVITGAGGAFSVGEDISGDDGETAWPYGIPANTSLNATYNKFRDADRKDI
                     LGRQLYRWQYPKPIVGAVSGWCLGAASWLALTCHVTIAADDAVFGQPQVRHGANTDFI
                     WIVLAGFKNALRYSLTGDHVDAQEALRIGLVNQVVPKDELLDTCFKFVERVALVPPET
                     VKINLHISTMGLEMMGLRKAWTLNSELASMARLTKREEFNKRLDDAKKSGGLAAFLEA
                     RDGPFQPEPFGPNAKKK"
     gene            complement(1570..2613)
                     /locus_tag="VLM90_13695"
     CDS             complement(1570..2613)
                     /locus_tag="VLM90_13695"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ14075.1"
                     /translation="MKTLAIGFTIAVLSVSSGYGQTKKPRTLDELAAYTGSDRQQILL
                     DGAKAEGKVVWYTSLSGVYRDMVDAFKRKYPDIAVDVFRGGSNDLTPRIINEAQAGRP
                     VADALESTPGLLMALRDRGLLKAYVSPELAKFPDEAKGKADGGRVFWVTDREAYMGFG
                     YNTRLIAPSEVPKNYQDLLRPELKGKIAVTTESSTSRVIGTMLKYKGEEFIKRLRAQE
                     VRLFKASSAGFLDLIAAGEIGGGPVVFQNQVMVKKERGAPLDWVPLDVAVANAGGSAV
                     TANAPHPHAALLFTDFVIGAEGQKLMEQFRYGVAWKEYAFKREYPERGMTSAEYEKAE
                     DRWTQMTRAVTKR"
BASE COUNT          607 a          869 c          838 g          573 t
ORIGIN      
        1 gggcgctggt tcctggctat cgctcttcac ccatatcaca ttggcgtcgg agactgccgt
       61 ctttgcccag cccgaagtgc gccacggctc gaacacgagc ttcatgtgga cgctgctcgg
      121 cggctacaag aacgctctgc ggtacggcct caccggcgac cacatcgacg cccaggaagc
      181 actgcgcatc ggtctggtgg tcaaagtcgt gccgccggat cagttgatcg acgaatgttt
      241 caagatcgtc gagcgtattg cccatgtgcc gccggaaacc gtcaagatca atttgcaagt
      301 cgccaccatg ggcctcgaca tgatgggctt gcgcgacgcc ttgaccctgg acaatcattt
      361 gtcggcgccg gcccatgtca tgttgcgcga agagtttcgc aaaccgctcg acgacgcacg
      421 cgcgaataaa ggcattcgcg aatatttaca aatgcgcgac ggcccgttcc aaccggaacc
      481 gttcggaccg agggcgaaga agcgcgattg agaaatcgcg ccgttcaaaa tgttcaagcc
      541 gtagcaaccc taggagaaga agacatggca cagtaccaaa cgatccttta tcagaagcag
      601 cgcaaaggcg tgctcatcac gctcaaccgg cccaatgcgt tgaacgcgat gaatcaggaa
      661 atgatgaacg agctcgatgc ggcgttggcg gaggcggaga aggacgcgga gattcgcgcg
      721 gtcgtcatca ccggcgccgg cggagcgttc tcagtgggcg aagacatcag cggcgacgac
      781 ggtgaaaccg cctggcccta tggcatcccc gcgaacacct cgctcaacgc gacctacaat
      841 aaattccgcg acgccgaccg caaagatatc ctgggccggc aactctaccg ctggcagtat
      901 cccaaaccga tcgtcggcgc ggtcagcggc tggtgcctcg gcgcggcctc ttggctcgcc
      961 ctcacctgcc atgtgaccat cgccgccgat gacgccgtgt tcggccagcc gcaggtgcgc
     1021 catggcgcta ataccgattt tatttggatc gtgctggccg gcttcaaaaa cgccctgcgc
     1081 tattcgctca ccggcgatca cgtcgatgcc caggaagcgc tgcgcatcgg cctggttaat
     1141 caggtcgtgc ccaaagacga gttgctcgat acctgtttca agttcgtcga gcgcgtcgcg
     1201 ctggtcccgc ccgagacggt gaaaatcaac ctgcacatct cgaccatggg cctggagatg
     1261 atggggctgc gcaaagcctg gacgttgaat tcggaattgg cgtcgatggc gcgcttgacc
     1321 aagcgcgagg aattcaacaa gcgcttggat gacgccaaga aaagcggcgg cctggcggcg
     1381 ttcctggaag cgcgcgacgg cccgtttcaa cctgaaccgt tcggaccgaa cgcaaagaag
     1441 aagtaagggg tgaaaagtaa ggggtaaggc gcttccccac gtctttcctc ccctgcgccg
     1501 cggggaggaa ggaggaggat tgaacggagc gtagcggttg aacgattgga acggcttgaa
     1561 cgcgttcagt catcgtttcg taaccgcccg cgtcatttgc gtccagcggt cctcggcttt
     1621 ttcgtactcc gcgctggtca tgccgcgttc gggatactcg cgcttgaatg cgtactcttt
     1681 ccacgccacg ccgtagcgaa actgctccat cagtttttgt ccttcggcac cgatgacgaa
     1741 atcggtaaac agcaatgcgg catggggatg gggcgcattc gcggtgaccg ccgatccgcc
     1801 ggcattggcg acagccacgt ctagcggcac ccaatccagc ggcgcgccgc gttccttctt
     1861 gaccatcact tgattctgaa acaccaccgg gccgccgccg atctcgccag cagcgatgag
     1921 atcgagaaat cccgcgcttg aggctttgaa caaacgcacc tcctgcgcgc gcaagcgctt
     1981 gataaattcc tcgcctttgt atttgagcat ggtaccgatc acgcggctgg tggaactttc
     2041 ggtggtgacg gcgatttttc ctttcagttc cggccgcaag agatcttgat aattttttgg
     2101 cacttcgctg ggcgcgatca ggcgggtgtt gtaaccgaag cccatgtagg cctcgcggtc
     2161 ggtcacccag aaaacccgcc cgccgtcggc tttgcctttc gcttcatcgg gaaacttcgc
     2221 cagttccggc gagacatagg ccttgagcag gccgcgatcg cgcaaagcca tcagcagccc
     2281 cggcgtgctt tccagggcat cggccaccgg gcggccggct tgcgcttcgt tgataattct
     2341 tggcgtcaga tcattgctgc cgccgcgaaa cacatccacc gcgatgtccg ggtattttct
     2401 tttaaacgcg tcgaccatgt cccggtagac gccggacagc gaagtgtacc agacgacctt
     2461 gccttcggcc ttcgcgccgt cgaggagaat ttgctggcgg tcggaacccg tgtaggccgc
     2521 cagctcgtcc aacgtccgcg gctttttcgt ctgtccataa cctgacgaga ctgacaggac
     2581 ggctattgtg aatccgatgg ccaatgtttt catagggttg ctcctctgct caaaggagaa
     2641 cagacaaacc gttcaccttc gtttgcgctg cttccgcagt taccacgttg gcgacaatgc
     2701 tggcaagcgc caaaggccta tcaactggaa acttgcattg acagccacgc gccaatcgga
     2761 ctatacggca agtaaccatc gcgacagttt ccatcgagaa gtcatgctaa atagagggag
     2821 agggtctcac cacgaaggac acagcgcggc tgcgccgcaa ccaaagtgac agaagagagt
     2881 ctgtgtt
//
LOCUS       DATIRS010001078         4347 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1557031, whole genome shotgun sequence.
ACCESSION   DATIRS010001078 DATIRS010000000
VERSION     DATIRS010001078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4347)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4347)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4347
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1557031"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            44..772
                     /locus_tag="VLM90_13700"
     CDS             44..772
                     /locus_tag="VLM90_13700"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HSQ14076.1"
                     /translation="MAAGRKDIPTIDSTELKELTDKLITACHILDHEGVTDGYGHVGV
                     RVPGAEAFITIANISPGAVTRDRLIMQDFAGNHLDGATTPPNEWPIHACIFKARPEIV
                     SVAHTHSKWSTIFSVLPIKLKPLHHYGKFLSADGPPVYQGVGLVRTLERGDDLAAALG
                     NGPAVLMRAHGDAVVGESIEQMIERTTRLAMLGEWNHLALLHGQPKYLSAEELEVYNA
                     DQRFPLRGWEYFVGRLSRIKNQLE"
     gene            868..1554
                     /locus_tag="VLM90_13705"
     CDS             868..1554
                     /locus_tag="VLM90_13705"
                     /inference="COORDINATES: protein motif:HMM:NF025871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing redox enzyme family protein"
                     /protein_id="HSQ14077.1"
                     /translation="MATSAEFVAKLKKDIQTFPKIRIKHPFLKAVCDGSATMEQIRAW
                     AIQDYQFRAAVPRICMLRYLACTDPEIAQKLWGVVEEEIHGMDTGTAGHNELAIRFAN
                     AIGLSQEQLENAVLRPSTAAHLYYVELIIHTLPWFVVMSIQIGAEGTFGPAAAAIGHG
                     LLKNYKMNPDDVRFFTVHSEADEDHSSLAEEIAVRYLHSPALQEQTYKATFRRMELLY
                     DIWSIDGYDK"
     gene            1801..2811
                     /locus_tag="VLM90_13710"
     CDS             1801..2811
                     /locus_tag="VLM90_13710"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14078.1"
                     /translation="MEQLTLGFISAFNERVEPLMNGTIEVEGVELIPTYSHPAETFWR
                     QLKFGEFEVAEMSMSSFLIARSQGADMIALPAFPSRRLFQTELSYHVDSGITKPQDLV
                     GKRLGVAEYQQTAALWLRGILEHDFGVSQYQIHWYMERSEEMSHGGATGFKPPPGISF
                     QRIAGNKSLASTILANELDVAHVSSPWVLQANTLDRSSRIAGKGDWSQIKPLFPDRMT
                     EGARFYRQHGFLPVNHAYIIRGDIHRKHPWLAGKLYDGFVRAKACAQDKLAAQIPTAL
                     IFGQEYLATTRELIGDDPFPFGIEANRAMLDTITRYSHEQGLTPRQMKVEELFAESTL
                     DT"
     gene            2909..3187
                     /locus_tag="VLM90_13715"
     CDS             2909..3187
                     /locus_tag="VLM90_13715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14079.1"
                     /translation="MPSSSPAHKRTQIRARLYYDFSLSKEGQEMMRGMQRIPVRKDFE
                     PHPPRLFRGYKRVVENPEDYKDFEGLVKSTTTFSSFVKQARRSNQQEM"
     gene            3187..4200
                     /locus_tag="VLM90_13720"
     CDS             3187..4200
                     /locus_tag="VLM90_13720"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14080.1"
                     /translation="MAKLRLNFISAFNERVEQLMQGVVQAEAIEIVPTYSHPSETFLR
                     QLRDLEFPVGEMSMSSYLIARERGLDMIALPVFPSRRLFHTELSYHTDSGIKKPEDIA
                     GKRIGVSEYQQTAALWQRGILDHDFGVSQYKVHWYMEHTEDMSHGGVTGFTPPEGISF
                     QRVPPNKILASMLVNHELDVAAINIPWKNAPSQLGRSHQITGADGDWSKVKLLFPDRI
                     AEGKRFFDKWGFLPVNHAYTIRGDIYRKHPWVAFNLYSGFVKAKEHFNAKLIDSIPSG
                     LFFGKEYLTKTQEIFGSDPFPYGVKANRKLLETLIDFSHEQGLITKKPKIEELFAAST
                     LDL"
BASE COUNT         1033 a         1294 c         1180 g          840 t
ORIGIN      
        1 acaacacatc gattcaacgc gcattcagtc tgaaggagca tgcatggcgg ccggtcgcaa
       61 ggacattccc accatcgatt ccaccgagct caaggagctc accgacaagc tgattaccgc
      121 ctgtcatatt ctcgaccatg aaggggttac tgacggctac ggccacgtcg gcgtgcgcgt
      181 gcccggcgcc gaggcgttta tcaccatcgc caatatcagt ccgggcgcgg tgacgcgcga
      241 tcgcttgatc atgcaggatt ttgccggcaa ccatctcgac ggcgccacga ctccgcccaa
      301 cgaatggccg atccacgcct gcattttcaa agcccggccg gaaattgtca gcgtggcgca
      361 tacccattcc aaatggagca cgatcttcag cgtgctgccg atcaagctca agccgctgca
      421 ccactatggc aagtttctct ccgccgacgg cccgccagtc tatcaaggag tcggcttggt
      481 acgcacgctc gaacggggcg acgacttggc agccgcattg ggcaacggac cggcggtgtt
      541 gatgcgcgcc cacggcgacg ccgtagtcgg cgaaagcatt gagcagatga tcgagcgcac
      601 cacccgcctg gcgatgttgg gcgagtggaa tcacttggcc ctgctgcacg gccaaccgaa
      661 atatctcagc gctgaagagt tggaagtgta caacgccgat caacgttttc cattgcgcgg
      721 ctgggaatat ttcgtcggcc ggctgagccg aatcaaaaat caattggagt gatggagtat
      781 tggaggaatg gaatactggg catctccccc catcactcca ttactccatc actgcaatga
      841 ccaaaaatca ttgaggagga taacatcatg gccacatccg cagaatttgt cgcaaaatta
      901 aaaaaggata tccagacgtt tcccaagatt cgcatcaagc atccgttctt gaaagcggtc
      961 tgcgacggca gcgccactat ggagcaaatt cgcgcctggg cgattcagga ctatcaattt
     1021 cgcgccgccg tgccgcgcat ctgtatgctg cgctacctcg cctgcaccga tccggagatc
     1081 gcgcaaaagc tctggggcgt ggtcgaggaa gagatccacg gcatggacac cggcaccgca
     1141 ggccataacg agctggcgat tcggtttgcc aacgcgatcg gcctaagcca agaacaattg
     1201 gagaacgccg tattgcgccc gtcgaccgcg gcgcatcttt attacgtcga gctgatcatt
     1261 cacaccttgc catggttcgt cgtcatgtcg atccagattg gcgcggaagg gaccttcgga
     1321 ccggcggcgg cggcgatcgg ccacggcttg ctgaaaaact acaagatgaa tcccgacgac
     1381 gttcgtttct ttaccgtcca ttcggaagcc gacgaagatc acagcagcct ggccgaggag
     1441 atcgccgtgc gttatctcca ctcgcccgcg ctccaggagc aaacctacaa agcgacgttt
     1501 cgccgcatgg aactgctcta cgacatctgg tccatcgacg gctacgataa ataagcaaaa
     1561 accggcgtgg caataccgaa acggagaaga attttcacca caaagggcac aagcatcaca
     1621 aagtagcggc cggtcgtaac cggcccagct cggaatccga tcattaaccg cagagaacgc
     1681 aaagggcgca aagttcggac atctttgtaa gggcgtttgg catacgccct gggcgggcgg
     1741 catggcgctt gcccggcaac aaaaattacg cagccgacct agattctaaa aacaattaaa
     1801 atggaacaac tcaccttagg attcatttcc gcctttaacg aacgggtcga accgctgatg
     1861 aacggcacca tcgaggttga gggagtcgaa ttgattccca catactcgca tccggccgag
     1921 accttttggc gccagttgaa gttcggcgag ttcgaagtgg cggagatgtc gatgtcgtca
     1981 tttctgatcg cccgatccca gggcgccgac atgatcgcgc tgccggcgtt tccgagccgc
     2041 cgcttgtttc aaaccgagct gtcctaccat gtcgattcgg gcatcacgaa accgcaagac
     2101 ctcgtgggca aacgtttggg cgtggccgag tatcagcaaa ccgcggcgtt gtggctgcgc
     2161 ggcattctcg aacatgactt cggcgtgtcg cagtaccaga ttcactggta catggagcgg
     2221 agcgaggaga tgagccacgg tggcgccacc ggtttcaagc cgccgccggg aatatcgttt
     2281 cagcgcatcg ccggcaacaa gagcctggcg tcgacaattc tcgcaaacga attagacgtc
     2341 gcccatgtct caagcccgtg ggtgctgcaa gccaacacgc tggaccgctc gagccgtatc
     2401 gccggcaaag gtgattggag ccaaatcaaa ccgctctttc ccgaccgcat gacggaaggc
     2461 gcgcgctttt accggcagca cggttttctc ccggtcaatc acgcatatat catccgcggc
     2521 gacattcacc gcaaacatcc ctggctcgcc ggcaaattat atgacggctt tgtccgcgcc
     2581 aaagcctgcg cccaagataa actagcggca cagattccga cggcgctgat cttcggccag
     2641 gaatatctcg ccacgacgcg cgagctgatc ggcgacgatc cgttcccctt cggtatcgaa
     2701 gccaatcgcg ccatgctcga caccatcacc cgctattccc atgagcaagg cttgacgccg
     2761 cgccagatga aggtcgaaga actcttcgcg gagagcacgc tcgacacgta attaagcccg
     2821 aacgtagttt cagccgggag ggaaatcatg aaactgaaga gccgcgtcgc cgtcatcgct
     2881 gtcagcgccg gaattttagc ggtgattttt gccgtcgagc tcgcccgcgc acaagcgaac
     2941 ccagatccgc gcccggctct actatgattt cagcctgtcc aaagagggac aagagatgat
     3001 gcgcggcatg cagcgtattc cggtgcgcaa agatttcgag ccccatccgc cgcggctatt
     3061 tcgcggctac aaacgagtgg tggaaaaccc cgaggattac aaagacttcg aagggctggt
     3121 aaaatctaca acgacatttt caagcttcgt taaacaagcc cggcgaagta accagcagga
     3181 gatgtaatgg cgaagttgcg tttaaacttt atatccgcat tcaatgaacg agtcgagcag
     3241 ctcatgcaag gcgtcgttca ggcggaagcg atcgagatcg tgccgaccta ttcgcatcca
     3301 tcggagacct tcttgcgcca gctgcgggac ctggagttcc cagtcggcga gatgtcgatg
     3361 tcgtcttact tgatcgcccg cgagcgcggc ctcgacatga tcgcgttgcc ggtgtttccc
     3421 agccgccggc tgtttcacac cgagctttcc taccacaccg actcgggaat caagaagcct
     3481 gaagacatcg ccggcaaacg catcggcgtc agcgagtatc agcagaccgc cgcgctctgg
     3541 cagcgcggca tcctcgacca cgacttcggc gtgtcgcagt acaaagtcca ctggtacatg
     3601 gaacacactg aggacatgag ccatggcggc gtcaccggct tcactccgcc agaagggatt
     3661 tcgttccaac gcgtgccgcc gaacaaaatc ttggcatcga tgcttgtcaa tcatgaattg
     3721 gacgtggcgg cgatcaacat tccctggaaa aacgcgccca gccagctcgg ccgctcgcac
     3781 cagatcaccg gcgcggacgg cgactggagc aaagtgaagc tgctctttcc cgaccgcatc
     3841 gccgaaggca aacggttttt cgacaagtgg ggatttctcc cggtgaacca tgcctacacg
     3901 attcgcggcg atatctatcg aaaacaccca tgggtcgctt tcaacttgta cagcggcttt
     3961 gtcaaagcca aggaacactt caacgccaag ttgatcgata gcattccgtc cgggctcttc
     4021 ttcggcaaag aatatttgac caagactcaa gaaatattcg gcagcgatcc gttcccctac
     4081 ggcgtcaaag ccaatcgaaa gctgctggaa acgctcatcg acttttcgca cgaacaaggc
     4141 ctgataacga aaaagcccaa gatcgaagaa ctattcgccg cgagcacgct agatttgtga
     4201 cacgtaacgc gatgctgttg tcgaggaatg cgtcgacaac tcgtcggtcg aacggttcta
     4261 gctcgatcgg cggcgcaggt taaactcaag acttcttacg catccaccgg cgccaccaac
     4321 gcgatctgga acctagccga ggagcac
//
LOCUS       DATIRS010001079         1615 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1458656, whole genome shotgun sequence.
ACCESSION   DATIRS010001079 DATIRS010000000
VERSION     DATIRS010001079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1615
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1458656"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            109..1209
                     /gene="glgP"
                     /locus_tag="VLM90_13725"
     CDS             109..1209
                     /gene="glgP"
                     /locus_tag="VLM90_13725"
                     /inference="COORDINATES: protein motif:HMM:TIGR02094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucan family phosphorylase"
                     /protein_id="HSQ14081.1"
                     /translation="MASSVIPKEIRPNSIAYFSMEVGLDSGMPTYSGGLGVLAGDTLR
                     AAADLGLPMIGVTLLHRKGYFRQTLDADGNQTERPVAWGYEEILEPMVPRAFVPIAGR
                     AVGIRAWRYVVRGVFGHTVPVYFLDTGLKENEPWEQSLTEALYDGDNRHRLCQEIVLG
                     MGGVAMLQALGYKNVSTHHMNEGHAAFLTLALLEQEVARGDLTAVADSDGEAVRQRCV
                     FTTHTPVPAGHDQFSVDLVREVLGGQRLTALEALDCIDNGTLNMTSLAIHLSRYVNGV
                     AMRHGEISRDMFPRYAIDSITNGVHAATWTAPPFRNLYDRFIPEWRRDNFYLRYAIKI
                     PLAEVQRAHRLPNARCWSKSPSAPRSILPRMS"
     gene            1155..>1615
                     /gene="glgP"
                     /locus_tag="VLM90_13730"
     CDS             1155..>1615
                     /gene="glgP"
                     /locus_tag="VLM90_13730"
                     /inference="COORDINATES: protein motif:HMM:TIGR02094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucan family phosphorylase"
                     /protein_id="HSQ14082.1"
                     /translation="MLEQIAQRAKVHLAENVLTICFARRAAGYKRADLLFTDLERLQS
                     IAEQAGPFQVIYSGKAHPRDEAGKAMIRRIFEFSEKLKDAMRVVYLESYDMDLAHTLC
                     AGVDVWLNTPERPLEASGTSGMKAALNGVPSLSILDCWWIEGCLEGVTGWG"
BASE COUNT          312 a          473 c          491 g          339 t
ORIGIN      
        1 ggcagaatcc tgacttcgca ccgtggtaca tattctgctt actttccttg aagataggtg
       61 tgcgcaaaaa taggaatgcg gcacgtcgac cggttcgctg tggaaaatat ggctagctct
      121 gtaataccaa aagaaatccg cccgaactct atcgcttact tttccatgga agtgggcctc
      181 gactccggca tgcccaccta tagcggcggc ctcggcgtcc ttgccggcga cacgttgcgc
      241 gcggcagccg atctcggctt gccgatgatc ggcgtcaccc tgctgcaccg taaaggctat
      301 tttcgccaaa ccctggacgc cgacggaaat cagaccgagc gaccggttgc atggggctac
      361 gaagagatat tggaaccgat ggtgccgcgc gcctttgtgc cgatcgccgg gagagcagtc
      421 gggatacggg cctggcgcta cgtcgtgcgc ggcgtcttcg gccatacggt gccggtctat
      481 tttctcgaca ccggactcaa ggaaaatgag ccctgggagc aaagcttgac cgaggcgctc
      541 tatgacggcg acaaccgcca tcggctctgt caggaaatcg tcttgggaat gggcggcgtg
      601 gcgatgctcc aggcgctcgg ttacaagaac gtcagcaccc atcatatgaa cgagggccac
      661 gccgcgtttc ttacgttggc gcttctggag caggaggtcg cgcgcggcga tttgacggcg
      721 gtggccgatt cggatggcga agcggtgcgc cagcgctgtg ttttcacgac ccacacgccg
      781 gtgcccgccg gtcatgatca gttttccgtc gacctggtcc gcgaggttct cggcggccaa
      841 aggctgaccg ccctcgaggc gttggattgc attgataacg gcacgctcaa catgacctct
      901 ttggcgatcc atttatcgcg ctacgtcaac ggcgtggcca tgcgccatgg ggaaatttcc
      961 cgggatatgt ttccccgtta cgccatcgat tcgattacca acggcgtgca tgcggcaacc
     1021 tggaccgcgc cgccgtttcg caatttgtac gaccgcttca ttcccgagtg gcgccgcgac
     1081 aatttttatc tgcgttatgc gattaagatc ccgctcgccg aagtgcagcg ggcgcatcgg
     1141 ctgccaaacg cgagatgctg gagcaaatcg cccagcgcgc caaggtccat cttgccgaga
     1201 atgtcctgac gatttgtttt gcccggcgtg ccgccggcta caaacgggcc gatttgttgt
     1261 tcaccgacct tgaacggctc cagtcgattg ccgaacaagc cggcccgttt caggtgatct
     1321 atagcggcaa ggcgcacccc cgcgatgaag cggggaaggc gatgatccgc cgcatttttg
     1381 agttttcgga aaaattaaag gacgccatgc gggtcgtcta cttggagagc tatgatatgg
     1441 atctggcgca caccctctgc gcgggtgtcg acgtctggtt gaataccccg gaaaggcccc
     1501 tggaagcctc cggcaccagc ggcatgaagg ccgctctcaa cggagtgccg agcctcagca
     1561 tcctcgactg ttggtggatc gaaggatgcc tggagggcgt caccggttgg ggctt
//
LOCUS       DATIRS010001080         1606 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_179024, whole genome shotgun sequence.
ACCESSION   DATIRS010001080 DATIRS010000000
VERSION     DATIRS010001080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1606
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_179024"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..189
                     /locus_tag="VLM90_13735"
     CDS             <1..189
                     /locus_tag="VLM90_13735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14083.1"
                     /translation="NLASLFAAQALLLSGGVLRGFGPVTEVINEASIKALLNVDMTAI
                     AGADSRPRYFVPRDPFSK"
     gene            212..>1606
                     /locus_tag="VLM90_13740"
     CDS             212..>1606
                     /locus_tag="VLM90_13740"
                     /inference="COORDINATES: protein motif:HMM:NF001989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobyric acid synthase"
                     /protein_id="HSQ14084.1"
                     /translation="MLAKTLMVQGTGSSVGKSILVTALCRIFKQQGLKVAPFKAQNMS
                     LNSFVTAAGDEIGRAQVVQAEAAGIAPTVAMNPVLLKPESDNHAQIIVRGKPLTRISA
                     ARFPQLKAELWCAITESLDDLRGAYDVVVIEGAGSPAEINLKDRDLVNMKVALHCHAP
                     VLLAADIDRGGIFAALVGTLELLEAPEKERVKAFIVNKFRGDVSLLEPGLDWLEARTG
                     VPVAGVVPFYHDIHIAEEDSVALEKRYMMKNRRDFDLDIAVIALPHIANFDDFDPFER
                     ELRVRLRYVEAGDDLGAPDLIILPGSKATVADLGYLRSSGRVQEILRAASAGIPIIGI
                     CAGYQMLGSAIHDPELIESSTALTTGIGLLPVATRFLPVKSTHQVCARTLAGFGLLAK
                     AQNAVISGYEIHMGLTEGLGASQPFLIEQRSQQICSDGDGTLSADGNVVGTYIHGLFH
                     NDEFRRAILLELAER"
BASE COUNT          331 a          492 c          456 g          327 t
ORIGIN      
        1 aatctggctt cgctattcgc cgcccaagcg ctgctgttga gcggcggcgt gttgcgcggc
       61 ttcggtcccg tcaccgaggt catcaatgaa gccagcatca aagcgctcct gaacgtcgac
      121 atgacagcga tcgccggagc cgattcacgc ccacgctact tcgtgccgcg cgatccattt
      181 tccaagtgat ctcccacccg aacgcataaa tatgctcgcc aaaacactaa tggtccaagg
      241 taccggctca tcggtcggca aaagcatcct ggtcacggcg ttgtgccgta ttttcaaaca
      301 gcaggggttg aaagtcgcgc cgtttaaggc gcaaaacatg tcgctcaact ccttcgtcac
      361 ggccgccggc gacgagatcg gccgcgccca agtggtccaa gccgaagcgg cgggcattgc
      421 gccgacggtc gccatgaacc cggtgctgtt aaaaccggaa agcgataatc acgcgcagat
      481 tatcgtccgg ggcaaaccgc tgacgcgaat ctccgcggcg cgctttcccc aactcaaagc
      541 cgagctctgg tgcgcgatca cggagtctct cgacgatctg cgcggcgctt acgatgtcgt
      601 cgtcatcgaa ggcgccggca gtcctgccga aatcaatctc aaggatcgcg atctggtgaa
      661 catgaaagtc gcgcttcact gtcacgcgcc ggtgttgctc gccgccgata tcgaccgcgg
      721 cgggatattt gccgcgctgg tgggcaccct ggaactgctc gaagcgccgg agaaggaaag
      781 agtcaaagcg ttcatcgtca ataagtttcg cggcgatgta tccttgctcg agcccggact
      841 agattggttg gaagcgcgca ccggcgtgcc ggttgcgggc gtggtgccct tttaccacga
      901 tattcatatc gccgaggagg attccgtcgc cttggaaaaa cgctacatga tgaaaaatcg
      961 ccgcgacttc gacctcgata tcgccgtcat cgctctgccg catatcgcca acttcgatga
     1021 cttcgatccc tttgaacgtg aactgcgcgt gcggctgcgt tacgtcgaag ccggcgacga
     1081 tcttggcgca cctgatctga ttattcttcc aggaagcaaa gcgacggtgg ccgatctcgg
     1141 ttatctccgc agcagcggcc gggtacagga gattctgcgc gcagcttcgg ctggcatccc
     1201 gatcatcggc atttgcgccg gttatcagat gctcggcagc gccattcacg atccggaact
     1261 gatcgagtca tcgacggcac tgaccaccgg cattggactc ttgccagtag cgacacgctt
     1321 tctcccagtg aaatcgaccc atcaagtgtg cgcgcgcact ttggccggct tcggcctgct
     1381 cgccaaagcg caaaatgcgg tcatttccgg atacgagatt cacatggggc taaccgaagg
     1441 gttgggggcg tctcagccat ttctaatcga gcaacgctcc cagcaaatct gctcggacgg
     1501 cgacggaacc cttagcgccg atggcaacgt ggtcggcacc tacattcacg gcctgtttca
     1561 caacgatgag tttcgccggg cgatattgct cgaactcgcc gagcga
//
LOCUS       DATIRS010001081         1895 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1458846, whole genome shotgun sequence.
ACCESSION   DATIRS010001081 DATIRS010000000
VERSION     DATIRS010001081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1895)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1895)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1895
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1458846"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..586
                     /locus_tag="VLM90_13745"
     CDS             <1..586
                     /locus_tag="VLM90_13745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14085.1"
                     /translation="PKCSATGLGSAGYDLPRLLEDVLGLKFKVISGYPGGADQDLAME
                     RGEVHCRAFTIEAFFGREPYFTWVKKNFVRVLLQTERKRHPKLPDTPTIYELMDQYKI
                     DAAKRRMASVYLSSGRFGSRPIVSSPGLSAERAKMLRDAYAKTLKDPDFLDEIGKRSW
                     SVEPVYGEELQALAKEVTSQPPEVIEWLKKLLSK"
     gene            610..1701
                     /locus_tag="VLM90_13750"
     CDS             610..1701
                     /locus_tag="VLM90_13750"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ14086.1"
                     /translation="MKRLSFKSSRVQAFNRIVFGFLILTLELLNPLNVEPAAAQTPPF
                     YQGKTIRIIVGYQPGDNHDQYARTYARFMGKYIPGNPTFVIQNMPGAGSMIAANHVYN
                     MTKPDGLTLGSFGGALIMAQLTGRKEAQFDWPKYGWIGTPYRAGHLLFMRTDAPTKTV
                     DQLRQGNDPPRCSATGVGSTGYDIPRLLEDALGMKFKIISGYPGGADQDLAMERNEVN
                     CRAITIDGFFAREPFISWVKKGFVHVLLHTEKQRHAKIPNVPTVFELMDQYKVADAKR
                     RLVNTYLGLWGFGSMPVVTTPGVPAERVKLLREAYLKTFTDPEFQEDMVKRGWEPRPV
                     NGDELAALAKDVINQPPEISEAIKRILSQ"
BASE COUNT          442 a          571 c          533 g          349 t
ORIGIN      
        1 gccaaaatgt tccgccaccg gcttgggcag cgccggctac gacttgccgc ggttgctcga
       61 agatgtctta gggcttaaat tcaaagtcat cagcggctat cccggcggtg ccgaccagga
      121 tctcgccatg gaacggggcg aagtccactg ccgggctttt accatcgaag cctttttcgg
      181 ccgcgaaccc tatttcacct gggtcaagaa aaacttcgtg cgcgtgctgt tgcaaaccga
      241 acgaaagcgc catccgaagt tgcccgacac accgaccatc tacgaactga tggatcagta
      301 caagattgac gcggccaagc ggcgcatggc cagcgtctat ctcagcagcg gccggttcgg
      361 ctcccggccg atcgtgtcgt cgccagggtt atcggcggaa cgggccaaaa tgctgcgcga
      421 cgcctacgcg aagaccctca aagatcccga ctttctcgac gagatcggca aacggagctg
      481 gagcgtcgaa ccggtgtacg gcgaagaatt gcaggcgctc gccaaagaag tcaccagcca
      541 gccgccggaa gtgatcgagt ggttaaaaaa attgttgtcg aaataattcg attcgaagcg
      601 aggtcggcca tgaaaagatt gtcgttcaag agttcaaggg ttcaagcgtt caatcggatc
      661 gttttcggat ttcttattct gacccttgaa cttttgaacc ccttgaacgt tgaaccggcg
      721 gcggcgcaga cgccgccttt ttatcaaggc aaaaccattc gcatcatcgt cggctaccag
      781 ccgggcgaca atcacgacca gtacgcgcgc acctacgcgc gcttcatggg caagtatatt
      841 cccggcaatc ccaccttcgt gattcagaac atgcctggcg cgggttcgat gatcgcggcc
      901 aatcatgtct acaacatgac caagcccgat gggctgacgc tgggctcctt cggcggcgcg
      961 ctgattatgg cgcagctgac cggacgcaaa gaagcgcagt tcgactggcc gaagtatggt
     1021 tggatcggta ccccctaccg cgccggccac ctgctcttta tgcgcaccga cgcgcccacc
     1081 aagacggtcg accaattgcg ccaggggaac gacccgccgc gctgttctgc caccggcgtc
     1141 ggcagcaccg gctatgacat tcctcggctg ctcgaggatg ccctcggcat gaaattcaag
     1201 atcatcagcg gttatcctgg cggcgccgac caggacctgg caatggaacg caacgaagtg
     1261 aactgccgcg ccatcaccat cgacggcttc ttcgcccgcg agccgttcat ctcatgggtc
     1321 aagaaaggct tcgtgcatgt gctgctgcac acggaaaaac agcgccacgc caagatcccc
     1381 aacgtgccaa ccgtcttcga actgatggat cagtacaagg tcgccgacgc caaacgccgc
     1441 ctggtcaaca cctacttggg actttggggc ttcggctcca tgccggtcgt caccacgccc
     1501 ggagtgcccg ccgagcgggt caaactgctg cgcgaagcgt atttaaaaac ctttaccgat
     1561 ccggaatttc aggaagacat ggtgaagagg ggctgggaac cgcgcccggt gaacggcgac
     1621 gaactcgccg ctctcgccaa agacgtcatc aatcagccgc cggaaatcag cgaagcaatc
     1681 aaacggatac tcagtcaatg atcgcctgaa aatcatcggc agccgactcc gggactgccg
     1741 ccggagcggg tgcacttatt acgcgaagcg ttcgccaaga tgttcaaaga cccggagttt
     1801 gtcgaagagc tgaaaaaacg caattgggaa atggaacctg tcggcggtga aaagctacaa
     1861 agccccgcca aggaagtggt caatcagccg gccgg
//
LOCUS       DATIRS010001082         2122 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1065726, whole genome shotgun sequence.
ACCESSION   DATIRS010001082 DATIRS010000000
VERSION     DATIRS010001082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2122
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1065726"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..195)
                     /locus_tag="VLM90_13755"
     CDS             complement(<1..195)
                     /locus_tag="VLM90_13755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14087.1"
                     /translation="MNGAVALERSEHAATMKKADPQPLAEALPVEQRRAQAERLMRTW
                     ETPAGWRYWSSVNNMDVGLWY"
     gene            complement(364..1347)
                     /gene="coxB"
                     /locus_tag="VLM90_13760"
     CDS             complement(364..1347)
                     /gene="coxB"
                     /locus_tag="VLM90_13760"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR02866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HSQ14088.1"
                     /translation="MAIRGFAIAAFALISLSCSGPQSALDPAGHGAQWIADMFWWMTG
                     SAAVIWLAVIVLAIWAARSAPEKQNRRRANLMIIGCGAVVPTLALALLLLYGLAPLPA
                     LLAPAPPGSLLIEVSGEQWWWRVRYRPPGAAVVSVANEIRLPVGAPVQFHLESPDVVH
                     SFWIPPLGGKIDMIPGRVTRLVLTPNRSGTFRGACAEYCGTSHALMAFPVVVMEPADF
                     ARWLTAQALPAQAPTTALAARGLAAFLESGCGACHSIRGTSAAGVIGPDLTHVGSRLS
                     LGAGILPNTPEAFVRWLKHADKLKPGVHMPGFGMLAESELQAVAAYLDGLE"
     gene            complement(1712..>2122)
                     /locus_tag="VLM90_13765"
     CDS             complement(1712..>2122)
                     /locus_tag="VLM90_13765"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HSQ14089.1"
                     /translation="GARGGDELNQPQAGKNYGWPVITYGVDYSGAKIGEGTSKAGMEQ
                     PVYYWDPVIAPSGALLYTGNIFPQWKGNLLIGSLQPGQLVRLEMTAGRVSNEYRYAGE
                     LGARIRDVQQAPDGAIYLITDENNGRVLRVEPAK"
BASE COUNT          433 a          678 c          609 g          402 t
ORIGIN      
        1 gtaccacaga ccgacatcca tattgttgac cgaagaccaa tagcgccacc cggcaggcgt
       61 ctcccaggta cgcatcagtc gctcggcttg cgcccgccgc tgttcgacag gcagagcttc
      121 ggctaggggt tgaggatcgg ctttcttcat ggtcgcagca tgttcagacc gttcaagcgc
      181 taccgctccg ttcaaccgct ttgcttcgtt caaaccgtcc aaccgcttcg ctccgtgtaa
      241 cccgctgagg atggggagaa agaaagagtt gagggggcgg tttaactatt gcgacctccg
      301 acaacggctt gaacggagcg cagcgcttga acggcttgaa cgatttgaac gtgtttaatt
      361 ttatcattcg agtccgtcca aatacgccgc cactgcctgc aactcggatt cagccagcat
      421 gccaaaaccc ggcatgtgca ctccgggttt taacttatcc gcatgcttaa gccagcgcac
      481 gaacgcctcc ggcgtgttcg gcaaaattcc tgcgccgaga ctcaaccggc tgccgacgtg
      541 ggtaagatca ggcccgatga cgccggcggc ggaggtgcca cggatgctgt ggcaagcgcc
      601 gcagccgctt tccaaaaacg ccgccaatcc gcgcgcagcc agcgcagtcg tgggcgcctg
      661 cgccggcagc gcctgcgccg tcagccagcg ggcaaagtcc gcgggttcca tgaccacgac
      721 tggaaacgcc atcagcgcgt gggacgtgcc gcagtactcg gcgcaagcgc cgcgaaaagt
      781 tccgctgcga ttgggcgtca gaaccaggcg cgtgacccgg ccgggaatca tgtcgatctt
      841 gccgcccaac ggcggtatcc aaaaggaatg gacgacatcg ggactttcta gatgaaactg
      901 caccggcgcg ccgaccggaa gacggatttc gttggcgacg ctcacgacgg cggcgccggg
      961 cggccggtaa cgcacgcgcc accaccactg ctcgccggag acctcgatta gcaggctgcc
     1021 tgggggcgcg ggcgcgagca acgccggtag cggcgccagc ccgtaaagca acagcagcgc
     1081 cagcgccagc gtcggcacca ctgcgccgca gccgatgatc atcagattgg cgcgccgccg
     1141 gttttgcttt tccggcgcgc tgcgcgccgc ccagatcgcc aagacgataa ccgcgagcca
     1201 gattactgcc gccgaaccgg tcatccacca gaacatatcg gcaatccact gggcgccatg
     1261 accggcggga tcgagcgcgg attgcggtcc gctgcagctc aaactgatca gcgcgaaagc
     1321 agcgatcgca aaaccccgga tagccatgca aatgctcacg gataacaacc caaagttcgg
     1381 ttttctgcgt aggggcgtat tgcatacgcc ctggggtggc tggcaatcgc gtgattgcga
     1441 agtttgcgca ggcgacacga atcgtagact gggaaaaaac gatttggcga attgccccac
     1501 aatgaattcc gcatgcaggt caccccaccc caaccgaacc tggattccgt tttcacgggc
     1561 atgacggatt tcagagattg cgccgatcgt aaccatagct tcggcgcgtt acgttgcagg
     1621 cttacggttc attctccagt tccgatcctt cttccgacaa cgacttgaac tgcttgaacg
     1681 gtttgaacga tttgaacggg cttttctttt gctacttcgc cggttcgacg cgcagaactc
     1741 tgccgttgtt ctcatccgtg atgaggtaaa tcgctccgtc cggcgcttgc tgcacgtcgc
     1801 ggatgcgcgc gcccagctcg ccggcgtaac gatactcatt gctgacgcgc ccggcggtca
     1861 tttccaaccg caccaactgg cccggctgca acgaaccgat caacagattg cctttccatt
     1921 gcgggaagat gttgccggta taaagcaatg cccccgacgg cgcgatcacc gggtcccaat
     1981 aataaaccgg ttgctccatg cccgccttgc tcgtgccttc gccgatcttt gccccggagt
     2041 aatcgacgcc ataagtaatc accggccagc cgtaattttt cccggcttgc ggttgattga
     2101 gctcatcgcc gccgcgcgcg cc
//
LOCUS       DATIRS010001083         2326 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_475722, whole genome shotgun sequence.
ACCESSION   DATIRS010001083 DATIRS010000000
VERSION     DATIRS010001083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2326)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2326
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_475722"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1323
                     /locus_tag="VLM90_13770"
     CDS             <1..1323
                     /locus_tag="VLM90_13770"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HSQ14090.1"
                     /translation="MPEIVVLPANVEEVSAVVKAAQRANVPIVPRGSGTGLAGGAVPA
                     EGGIILSLTRFDRILKIDLENRLALVEPGVINLDVTKAVAKDGFFYAPDPSSQAACSI
                     GGNVANNSGGPHTLAYGVTTNHVLGVEVVLDNGEIVWLGGEVADTPGYDLCGVFVGSE
                     GTMGIVTKIAVKLMPGRESVRTLLAIFDDMDHATKTVVDITSEGIIPAALEIMDHTAI
                     EAVERGAPVGFPRDAAAVLIVEVEGLSEHTELSIHLAREVCQRNGAREVRVAGDEAQR
                     QLLWKGRKGAFGAMGTLAPNYYVQDGVVPRSQLPEMMRRVAAIGKEFNLTIANVFHAG
                     DGNLHPNILFDMRKPGELERVIEAGAATLRACVALGGSITGEHGVGMEKKAYIGLLFN
                     DADLAAMTRVRHAFDPDGRFNPAKLFPTPASCGEVRLEPAKIPAGLWI"
     gene            1423..>2326
                     /locus_tag="VLM90_13775"
     CDS             1423..>2326
                     /locus_tag="VLM90_13775"
                     /inference="COORDINATES: protein motif:HMM:NF014774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HSQ14091.1"
                     /translation="MEHTHHTPDTGNKPRIATLDLAELYQCVHCGLCLNQCPTYRVTR
                     LEAESPRGRIHLVKAAADGRIELNDRFKEHLQLCLLCRACESACPSGVQYGRIAETAR
                     EHIGPPGSPVAKALLNFVFTQILPHATRLKLAFTLLRLYQRTGLQKLLRLFMPAKLRA
                     MDAMLPTIPSKFYQPAANILPAIGPRRARVAMLNGCVMPLLVGDVNDATVRVLRRSGC
                     EVILPAQQVCCGALNIHNGEQVVAKQMARRNIDAFLAAGQDAGLDAIIVNAAGCGAAM
                     KEYDFLLRDDTAYAEKAKRFSALVK"
BASE COUNT          463 a          740 c          672 g          451 t
ORIGIN      
        1 atgccggaga tcgtcgtcct accggccaac gtcgaagaag tttcagcggt ggttaaagcg
       61 gcgcagcgcg ccaatgtgcc gatcgtgccg cgcggctcgg gcactggcct agccggcggc
      121 gcggtgccgg ccgagggcgg catcatccta tcgctcaccc gtttcgatcg tatcctgaag
      181 atcgatctgg agaatcgtct cgccttggtc gaacccggcg tcatcaatct cgatgtcacc
      241 aaggccgtcg ccaaggacgg gtttttctac gcccccgacc caagcagcca ggccgcttgt
      301 tccatcggcg gcaacgtggc gaacaactcc ggcgggccgc acacactggc ctacggcgtc
      361 accaccaatc atgtactggg cgtcgaagtc gtcctcgaca atggtgaaat cgtctggctg
      421 ggcggtgaag ttgccgacac gccgggctac gatctctgcg gtgttttcgt cggctccgaa
      481 ggcaccatgg gcattgtcac gaaaatcgcc gtcaagctca tgccgggtcg cgagtctgtg
      541 cgcaccctgc tcgcgatctt cgacgacatg gaccacgcta ctaaaaccgt cgtcgatatt
      601 acctccgaag gaattattcc ggcggcgctg gaaatcatgg accacaccgc catcgaagcg
      661 gtcgagcgcg gcgcgccggt gggctttccg cgcgacgccg cggcggtgtt gatcgtcgaa
      721 gtcgaaggac tgagcgaaca taccgaactg tcgatacatc tggccaggga agtttgccaa
      781 cgcaacggcg cccgcgaggt gcgcgtcgcc ggggatgaag ctcaacggca gctgttatgg
      841 aaaggccgca aaggcgcctt cggcgccatg ggcacattgg cgcccaatta ttacgtccaa
      901 gacggcgtcg tgccgcgcag ccagttaccc gagatgatgc gccgcgtcgc cgccatcggc
      961 aaagaattta acttaaccat cgccaacgtg tttcacgccg gcgacggcaa tctgcacccg
     1021 aatattttgt tcgacatgcg caaacccggc gagttggagc gcgtcatcga agccggcgcc
     1081 gcgaccctgc gcgcctgcgt cgcactgggc ggcagcatca ccggcgaaca tggcgtcggc
     1141 atggaaaaaa aggcctacat cggcttgctg ttcaacgacg ccgatctcgc cgccatgacc
     1201 cgcgtgcgtc acgctttcga ccccgacggc cgtttcaatc cggcgaaact gtttccgacc
     1261 ccagccagtt gcggcgaagt gcggttggaa ccggcaaaga ttccggccgg tttgtggata
     1321 tgactgaata cgattcggct tttgggttac ctatttcggg ttaactcaga actcgccctc
     1381 tccgacacga acgcgaaacg cgaaactatt taaaggtcgc acttggaaca tacccatcac
     1441 acccctgata ccgggaataa accgcgaatc gccacgctcg atcttgccga actctaccaa
     1501 tgtgttcact gcggcctgtg tttgaaccag tgtccaacct accgcgtcac tcgtctcgag
     1561 gcggaatcgc cgcgcggcag aatccatctg gtcaaagctg ccgccgacgg gcgcatcgag
     1621 ttgaacgatc gcttcaaaga gcatctgcaa ctttgtctgc tttgccgcgc ctgcgagtcc
     1681 gcttgtccct ccggcgtgca atatggccgc atcgccgaaa ccgcccgcga acatatcggc
     1741 ccgccggggt cgccggtggc caaagcgctg ttgaacttcg tcttcacgca gatacttccc
     1801 cacgccacaa ggttaaaact ggcgttcacg cttttgcgcc tgtaccagcg taccggcctg
     1861 cagaaacttc tacggctctt catgccggca aagctgcgcg ccatggatgc catgctgccg
     1921 acgatcccgt ccaagtttta tcagccggcg gcgaacattc tgcccgccat tggtccgcgc
     1981 cgcgcccgcg tcgccatgct caacggctgc gtcatgccgc tgcttgtcgg tgacgttaac
     2041 gacgccactg tgcgggtgct gcgtcgcagc ggctgcgagg tgatacttcc cgctcaacaa
     2101 gtctgctgcg gcgctttgaa tattcacaac ggcgaacaag tagtcgcgaa gcagatggcg
     2161 cggcgtaata tcgacgcgtt tctagcagcc ggccaagatg ctggcttaga tgccataatc
     2221 gtcaacgccg ccggctgcgg cgcggcgatg aaggagtatg attttctcct gcgtgacgat
     2281 acggcctacg ccgaaaaagc caagcgtttc agcgccctgg tcaaag
//
LOCUS       DATIRS010001084         2318 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1851993, whole genome shotgun sequence.
ACCESSION   DATIRS010001084 DATIRS010000000
VERSION     DATIRS010001084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2318
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1851993"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(356..1294)
                     /locus_tag="VLM90_13780"
     CDS             complement(356..1294)
                     /locus_tag="VLM90_13780"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HSQ14092.1"
                     /translation="MEYRQLGNSGVRVSVVGLGTNRFGSSDMQQAEVNKVIDAAVETG
                     VNFLDTANVYNDGASETTLGHALKGRMDKFVVATKFNFPRKTSANSWGASRYHMMQAV
                     EQSLRRLQSDHIDLFYCHRWDDTTPIEETLRGLDDLVRMGKVCYIGASLYASWQLAHA
                     NVMAELRGWTRFVVLQSEYNMLNRGVEREVLPCCQAHDVGFVPYYPLAGGFLTGKYEM
                     GKPPPPGSRGESVKLVQNLMVEGNYHLVNNLSAWSKDHGRGVNELAQAWLLAQPSVCS
                     VITGAKRVEHVTSNVKAADWHLTAAELKEVDGILRR"
     gene            1499..>2318
                     /locus_tag="VLM90_13785"
     CDS             1499..>2318
                     /locus_tag="VLM90_13785"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HSQ14093.1"
                     /translation="MDSAAQLVALASTAVYAAGNLYARVGLVHSTPLVVTLISLIVQT
                     VVAGSILMARGSVPSADPRALAVFIAVGVALPFVRWLSYTGIARIGSARSSSLRSTHP
                     FFSAALAIAFLNEPARHNIMLGTLLIVAGIFITCWDSQDARSDAKPRDALFPLSAAFF
                     SGIIHPFTRYALTITNEPLLYAAVVGLSSLLALGGYLLITGRGKRMVWPDRRALRSFV
                     SASLFETLGFLLFSAAVSLGPVVLIAPIMATTPMWVLIGSILLLRDLEKVTLRTA"
BASE COUNT          447 a          741 c          608 g          522 t
ORIGIN      
        1 cagccatctt tccgatcaaa ggagcgcgga ctttcgtgtc cgcgtttgat cgatggcggg
       61 gtggaaaacc cgcgctcctg ttaaatgccc agaagcccgc tccggatcaa aagagcatca
      121 accacgaaac acaccaacga cacgaaagtt cggaaaatct ccggtctcga ttttcgtgtg
      181 tttcgtactt gtcgtggtta aatcttgctt cgctcttttt ccgacctggc atcgtagaaa
      241 tggatggagt attccaagag agcgggtttg gaacccaccc ctaagatcgg gaattcactt
      301 ttttgttctc tgcggccaat atgccgaatc ggaatcgccg ctggggttgc tttctctacc
      361 tccgcaaaat gccgtcgact tctttcagct ccgccgccgt caagtgccag tccgccgctt
      421 tcacgttgct cgtcacgtgt tcgacgcgct tggcgccggt gatcaccgag cagacgctcg
      481 gttgcgccaa cagccacgcc tgcgctaact cattgacgcc gcggccatga tctttagacc
      541 atgcgctgag attgttcacc aaatgataat tgccctcgac catgagattt tgcacgagtt
      601 tgaccgactc gccgcgcgaa cccggcggcg gcggtttgcc catctcgtac ttgccggtga
      661 gaaaaccgcc cgccagcgga tagtaaggca caaagccaac gtcatgcgcc tggcagcacg
      721 gcaagacttc gcgctcgacg ccgcgattga gcatgttgta ctccgactgc aagacgacga
      781 agcgggtcca gcctctgagc tccgccatca cgttggcgtg ggccaattgc caggacgcat
      841 acaacgacgc gccgatgtaa cagaccttgc ccatgcgcac gagatcgtcg agaccgcgca
      901 gcgtctcttc gatgggcgtg gtgtcgtccc agcggtggca ataaaaaaga tcgatgtgat
      961 cgctttgcaa gcggcgcaaa ctctgctcca ccgcctgcat catatgatag cgcgacgcgc
     1021 cccagctgtt ggcgctggtt tttctaggaa aattaaactt ggtcgcgacg acgaatttat
     1081 ccatacgccc tttgagcgca tggcccaagg tcgtctccga tgcgccgtca ttgtagacgt
     1141 tggcggtgtc gaggaaattg acgccggtct cgacggcggc atcgatcacc ttgttgacct
     1201 cggcctgttg catatccgac gaaccgaagc ggttggtgcc cagtccgacg accgaaacac
     1261 gaacgcccga attgcccagt tggcgatact ccatgaaaac tccctgtgat gtttcgcttt
     1321 gaaggttccg aaacgaattc gttcggaaaa aattgtcaaa cttctcgcgt cttctaacat
     1381 tcacccactg ccgggtcaat tcgcactcga atggaacggc aacgccactt cagctaaagg
     1441 tatcgccatg gctcacgcac gaaactcgta acgcgaaacc cgcaaccacc cgatcgccat
     1501 ggactccgcc gcccagctcg tcgccctcgc ttccaccgcc gtctacgccg ccggcaatct
     1561 ctacgcccgc gtcggcctgg tgcactccac accgttggtc gtcacattga tctcattaat
     1621 cgtgcaaacg gtagtcgccg ggtcgatact catggcccgc ggcagcgtgc ccagcgccga
     1681 tccgcgcgcg ctggcggtct tcatcgcggt cggcgtcgct ttgccgtttg tgcgctggtt
     1741 gagctacacc ggcatcgccc gcatcggctc agcacgctcg tcatcgctgc gctcaaccca
     1801 tccgttcttc agcgccgcct tggccatcgc tttcttgaac gaaccggcgc ggcacaatat
     1861 catgctcggc accttgctca tcgtcgccgg gattttcatt acctgttggg attcgcaaga
     1921 cgcgcgaagc gacgccaaac cgcgggacgc gctatttccg ctgtcggcgg catttttttc
     1981 cggcatcatc catccgttca cacgctatgc gctcaccatc accaacgaac cgttgctcta
     2041 tgccgccgtg gttggcctat cgtcgttgct tgctctcggc ggctatctgc tcatcaccgg
     2101 tcgcggcaag cgcatggtct ggcccgatcg ccgcgccctg cggtcatttg tctcggcgag
     2161 tttattcgag accctcggct ttctcctttt tagtgctgcc gtcagcctcg gcccagtggt
     2221 gctgatcgca ccgatcatgg cgaccacacc catgtgggtg ctgatcggtt cgatcctact
     2281 attgcgcgat ctggaaaaag tcacgttgcg caccgcca
//
LOCUS       DATIRS010001085         2891 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_770519, whole genome shotgun sequence.
ACCESSION   DATIRS010001085 DATIRS010000000
VERSION     DATIRS010001085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2891)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2891)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2891
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_770519"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1175)
                     /locus_tag="VLM90_13790"
     CDS             complement(<1..1175)
                     /locus_tag="VLM90_13790"
                     /inference="COORDINATES: protein motif:HMM:TIGR00765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HSQ14094.1"
                     /translation="MPESKLRDKFFRSRQFLKSDIWRIHAGKLSRRELLYINPLRILL
                     LAVRRFYDDKCELRASALTFYTLLSIVPVVAMAFGVAKGFGLEKLLEAQLLAKLEGQP
                     EVADRLLGFARTLLVNTKGGAIAGVGVAVLFWSVIKVLGNIESALNDIWGISKARAMG
                     RKLADYLSVMMICPVLLIVASSATLLVTTQITTMVEKLAFLGYAGGMIIFLIKLLPYT
                     VIWFLFTFMYVFMPNTKVQLKSAIWGGILAGTIYQLTQFAYIKFQIGVSGYGAIYGSF
                     AALPLFLVWLQLSWLIVLFGAEVSFAHQNVAAYEFAADCASLSHRFKRTVALFITQHC
                     VKAFVHAQRAPTAEELAQELEIPIRLARSTLLELTDAKILAEVRASDSELIAYQPGCP
                     "
     gene            complement(1271..2398)
                     /locus_tag="VLM90_13795"
     CDS             complement(1271..2398)
                     /locus_tag="VLM90_13795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSQ14095.1"
                     /translation="MAQNPRIEALMAAFRKTTYFRWMAKQAIPVVDGYGVEDVRDVAM
                     APWSRTGGKAAFLNLYGMEGVTGMYVGEIPAGGALNPEKHFYEEVIVVLEGQGATEVW
                     QDGGKKQMFEWGPWSLFAPPLNTWHRLINGGRTPVKYLSVSNAPLVMDIVHNEDFIFN
                     CPYTFADRYAAADGYFNQGLKRYEAGMQHIWETNFISDIQTANVDSREVKGAGVGITQ
                     FEIAGNSLIGHLATWPAARYHKAHYHGAGAILLGLQSSGYVLLWSKESGTHPFANGHG
                     DEVVEVKWKAGSVYCPGGGWFHQHFNTGADPARHLALRYGSRIHPIGFKIADKRSEDG
                     VYIDVKQGGTLIEYADEDPYIRQHYDDALKKTGVKSAMPAL"
     gene            2474..>2891
                     /locus_tag="VLM90_13800"
     CDS             2474..>2891
                     /locus_tag="VLM90_13800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14096.1"
                     /translation="MDRGNSPVDFSSHAKHVKIWPMKLLRNLGLVLTLMTLAGCSHPM
                     TMRSPEGVTYDGRYRFGREDSGLMQIHGPENEVLLGRFDRVGRTAFVENYQKAFGRGT
                     IELDGPDLSRHVGTLGGVIGSTSGFHETAFADPAAAA"
BASE COUNT          626 a          811 c          833 g          621 t
ORIGIN      
        1 gggcagcccg gctggtaggc gatcagctca ctgtcgctgg cacgaacctc cgcaagaatc
       61 ttcgcatccg tcaattcgag aagagtggac cgagccaagc ggatggggat ttccaattct
      121 tgggcgagct cctcggcggt gggcgccctt tgcgcgtgga caaacgcctt gacgcaatgt
      181 tgggtgatga acagggccac cgtgcgtttg aaccgatggc tgagactggc gcagtcggcg
      241 gcgaactcat aggcggcaac attctgatgg gcaaaggaga cttcggcgcc gaagagaacg
      301 atcagccagc tcaattgcag ccataccaga aacagcggca gcgcggcgaa gcttccgtag
      361 atcgcgccgt aaccggagac gccgatttgg aatttgatgt aggcaaactg cgtcagttga
      421 tagatagtcc cggccaagat tccgccccag attgcggatt tcaactgaac ttttgtattc
      481 ggcatgaaaa catacatgaa ggtgaacaaa aaccagatca cggtgtaggg caaaagctta
      541 atgagaaaaa tgatcatccc gccggcataa ccgaggaagg caagtttctc gaccatcgtg
      601 gtaatttgcg tggtcactaa cagggtcgcg ctgctggcga caatcaacag caccggacag
      661 atcatcatca ccgataaata atcggcaagc ttgcgcccca tggcgcgcgc cttggaaatg
      721 ccccaaatat cgttgagagc gctctcaatg ttgcctaaga cttttatcac cgaccaaaac
      781 aacaccgcca caccgacgcc ggcgatggcg ccgcccttgg tgttcaccaa cagggtgcgg
      841 gcaaagccga gcaggcgatc ggcgacttcc ggctgtcctt cgagtttggc gagcagctgc
      901 gcctcgagta atttttccag gccgaagccc ttggcgacgc cgaacgccat cgcgaccacg
      961 ggcacgatcg acagcaaggt gtaaaaggtc agcgccgacg cgcgcaattc acacttgtcg
     1021 tcgtagaatc ggcggaccgc caacagcagg atcctgagcg ggttaatgta aagtagttct
     1081 cgacgactta atttgcccgc gtgaatgcgc caaatatcgc ttttgagaaa ttgccttgac
     1141 ctgaaaaatt tgtcgcgcag tttgctttcc ggcatagtct ctttcgactc cgttcaaagg
     1201 ttcaagcgtt caaggttcaa tgttttctga ttcggattga atccttgagc cttgaacatt
     1261 tgaacgatta ttaaagcgcc ggcatcgcgc tcttcacgcc ggttttcttc aatgcatcgt
     1321 catagtgctg gcgaatatac gggtcttcgt cggcgtactc gattaaggtt ccgccttgtt
     1381 tgacgtcgat atagacgcca tcttcgctgc gtttgtcggc gatcttgaaa ccgatggggt
     1441 ggatgcggct gccgtagcgc agcgccaagt ggcgcgctgg atcggcgccg gtgttgaagt
     1501 gttggtggaa ccagccgccg cctgggcagt agacgctgcc ggccttccat ttgacctcga
     1561 cgacttcatc gccatggccg ttcgcgaatg gatgggtgcc ggactctttc gaccatagca
     1621 agacatatcc tgacgattgc aggcccagca gaatcgcccc ggcgccgtga tagtgcgctt
     1681 tgtgatagcg cgcggcgggc caggtggcga gatggccgat caaactattg ccggcgattt
     1741 cgaactgggt gatgccgacg ccggcgcctt tgacttcgcg gctgtcgacg ttggcggtct
     1801 ggatgtcgct gataaaattg gtctcccaga tatgctgcat gccggcctcg tagcgcttga
     1861 gaccctgatt gaaatagccg tcggcggcgg cgtagcggtc ggcgaaagta tacggacagt
     1921 taaaaataaa atcttcgttg tggacgatgt ccatgaccag cggcgcgttg ctcaccgaca
     1981 agtatttcac cggcgtccgg ccgccattga tcagccggtg ccaggtgttg agcggcggcg
     2041 caaacaggct ccacgggccc cactcgaaca tctgcttctt gccgccatcc tgccaaacct
     2101 ccgtggcgcc ttggccttcg aggacaacga tcacttcttc atagaaatgc ttctccgggt
     2161 tcaacgcgcc gccggcgggg atctcgccga catacatgcc ggtgacgcct tccatgccgt
     2221 agagatttaa aaaagccgct ttgccaccgg tgcgcgacca aggggccatg gcgacatcgc
     2281 gcacatcttc gacgccataa ccgtcgacca ccggtatggc ttgcttggcc atccagcgaa
     2341 agtaagtggt cttgcgaaag gccgccatca aagcttcgat acgtgggttc tgtgccatgt
     2401 gaagaatgac tcccgcttgc tgaactggtc gtgaacccga cctttagcac gatttggcaa
     2461 agcgcaggaa gtcttggacc gcggaaattc gccggtggat ttctcgtccc acgcaaagca
     2521 tgttaagatt tggccgatga agttgttgcg caatctcggc ctggtcctaa cgctcatgac
     2581 gctcgcaggc tgttctcatc ccatgaccat gagatcgcct gaaggcgtga cctacgacgg
     2641 acgttaccgt ttcggccgcg aggacagcgg tcttatgcaa attcatgggc cggaaaacga
     2701 agtgctgctg ggccgcttcg accgagtcgg ccggacggca tttgtcgaga actatcagaa
     2761 agcctttggc cgcggcacca tcgagcttga cggccccgac ctgtcgcgcc atgtcggaac
     2821 tttaggcggg gtgattggat ctacctcagg ctttcatgaa accgcctttg ccgatccggc
     2881 cgcggccgcc g
//
LOCUS       DATIRS010001086         1593 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1754228, whole genome shotgun sequence.
ACCESSION   DATIRS010001086 DATIRS010000000
VERSION     DATIRS010001086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1754228"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1155
                     /locus_tag="VLM90_13805"
     CDS             <1..1155
                     /locus_tag="VLM90_13805"
                     /inference="COORDINATES: protein motif:HMM:NF015706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EF-Tu/IF-2/RF-3 family GTPase"
                     /protein_id="HSQ14097.1"
                     /translation="GKLSILRVLSGKLNSDLTAYVPNRQIREKVGHIFRLEGKKQEAV
                     KEALAGEIVAVAKFKDIATGDTLCDEKAPIQYDGPVHLTPNISFALEPKSKADEDKLP
                     NGLHRMREEDQTIELHRDEETRDFILSGMGQQHIEIAVEKLKRKYGAEVVLKAPKVPY
                     KETIRGSASAQGRQKKQTGGHGQFGDTWIKVEPLPHGAGFEFVDKIVGGAIPRNYIPA
                     VEKGIREAMAGGYLAGYPMVDVRATLYDGSYHDVDSSDMAFKIAASMGFRNAVEKAKP
                     VLLEPIMNMEVSVPDECMGDVIGDLNSRRGKVVGMETKGHTQVIKAKVPMAEVLKYAA
                     DLRAITSGRGEFHLEFAHYEELPAHLAERVIKETKARKMAEQEGEHRAHA"
     gene            1164..1382
                     /locus_tag="VLM90_13810"
     CDS             1164..1382
                     /locus_tag="VLM90_13810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14098.1"
                     /translation="MAESYGQFNASLLYCNKCGQAMPVRQRLLLVLPDGEMYDYTCQR
                     CNSSVGSKTEKAGVNQNSGGTKSRLGGL"
BASE COUNT          393 a          426 c          465 g          309 t
ORIGIN      
        1 ggcaaactgt cgattctgcg cgtgctgtcg ggcaaactca actccgacct gacggcctat
       61 gtaccgaacc ggcaaattcg cgaaaaggtc ggccatatat ttcgcctcga aggcaaaaaa
      121 caggaagcag tcaaggaagc actggccggc gagatcgttg ccgtcgccaa gttcaaagac
      181 atcgccaccg gcgatacgct gtgcgacgaa aaggcgccga ttcaatatga cggaccggtg
      241 cacctcacgc ccaacatttc ctttgccttg gaaccgaaga gcaaggccga cgaagataag
      301 ttgcccaacg gcttgcatcg catgcgcgag gaagatcaga ccatcgaact gcatcgcgac
      361 gaggagaccc gcgattttat tttatccggc atgggccagc agcacattga aatcgccgtc
      421 gagaaattga aacgcaaata tggcgccgag gtagtgctca aagcgcccaa ggtgccgtat
      481 aaagaaacca ttcgcggcag cgccagcgcc cagggccggc aaaaaaaaca gaccggcggc
      541 cacggccagt ttggcgatac ctggatcaaa gtcgagccgc tgccccatgg cgccggtttt
      601 gaattcgtcg acaagatcgt cggcggcgcg atcccgcgca attatatccc ggcggtggag
      661 aaggggattc gagaagcgat ggcgggcggc tacctggccg gatatcccat ggtcgatgtc
      721 agggcgaccc tctatgacgg ctcctaccac gatgtcgatt cttcggacat ggcgtttaag
      781 atcgccgcgt ccatgggatt tagaaatgcc gtcgagaaag ccaagccggt gctgctcgaa
      841 ccgatcatga atatggaagt atcggtgccc gacgaatgca tgggcgacgt tatcggcgat
      901 ctcaacagcc ggcgcggcaa ggtggtgggc atggagacca agggacatac gcaagtcatc
      961 aaagccaaag tgccgatggc tgaagtgctc aagtatgccg ccgatttgcg cgccatcacc
     1021 agcggccggg gtgagtttca tctcgagttc gcgcactatg aagagctgcc ggcgcatttg
     1081 gcggaaagag tgataaagga aaccaaggcg cgcaagatgg ctgagcaaga gggtgagcat
     1141 cgagcccacg cgtaagtgtt gccatggcgg aatcctacgg tcaattcaat gccagtttgc
     1201 tctactgcaa taagtgcggc caggcgatgc cggtgcgcca gcgtttattg ctggtattgc
     1261 ccgacggtga gatgtacgac tacacttgcc agcgctgtaa tagctcggtc ggttcgaaaa
     1321 ccgaaaaagc cggtgtaaat caaaacagcg gcggcacaaa atctcgctta ggaggacttt
     1381 aaccatggca gtgatcgatt ccgatgccca tgtgctcgag accgaacata cgtgggacta
     1441 tatgttggcg cccgctcgga cgccaacata tagtcccaag tatgttcggt ctcgagcaca
     1501 tgggcatcgg catcgatcac tgccatggtt aaagtcctcc taagcgagat tttgtgccgc
     1561 cgctgttttg atttacaccg gctttttcgg ttt
//
LOCUS       DATIRS010001087         2536 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1948750, whole genome shotgun sequence.
ACCESSION   DATIRS010001087 DATIRS010000000
VERSION     DATIRS010001087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2536
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1948750"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..732)
                     /gene="ftsA"
                     /locus_tag="VLM90_13815"
     CDS             complement(<1..732)
                     /gene="ftsA"
                     /locus_tag="VLM90_13815"
                     /inference="COORDINATES: protein motif:HMM:TIGR01174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HSQ14099.1"
                     /translation="MAKKNTIVVGLDIGTSKVCAVVGEMTEHGVDIIGVGSHLSAGLR
                     KGVVINIESTVSSIKRAVQEAALMAGCEIHTVFATVSGGHIKSFNSHGIVAVKYKEVT
                     QRDLDRVIDAAKAVAIPLDREVLHVLPQDYIIDEQDGIKEPLGMSGVRLEAKVHVVTG
                     AVTSVQNIVKCCNRSGLNVAEIVLTPLAAAEAVLTEEERELGVVLVDMGGGTTDITVF
                     HDGTVKHTAVLSIGGNHVTNDIAAGL"
     gene            complement(774..1589)
                     /locus_tag="VLM90_13820"
     CDS             complement(774..1589)
                     /locus_tag="VLM90_13820"
                     /inference="COORDINATES: protein motif:HMM:NF015739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsQ-type POTRA domain-containing protein"
                     /protein_id="HSQ14100.1"
                     /translation="MQLKVHHRDNRKRDQQRGRRRWLIAGMVASLLIAGALLYLLSGP
                     LAIVARSTRDFFADNRYFAVRQIEVHGGDKVGGDEIVAAAGLRQGMNIWNVDAVALEN
                     RIAKHPWVRRVLVRRDFPRRVVIDVEERRPKAIVGVGKLYYIDADAVVFKEVASGESI
                     KYPMLTGVYAEGLMRGDPAARQRIRDAIRLTDLMAQRSHALSEIHFEAPDRLVVYPTK
                     FPVAWRLGWGDWEEKLAHLDRLLELWKGNEERLASLDMSFRDQVVARLRGKKE"
     gene            complement(1600..2349)
                     /gene="murB"
                     /locus_tag="VLM90_13825"
     CDS             complement(1600..2349)
                     /gene="murB"
                     /locus_tag="VLM90_13825"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: protein motif:HMM:NF010480.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HSQ14101.1"
                     /translation="MPLCLLGNGSNVLISDRGVRGAVIHLTGEFKKIVWHEVGENIEV
                     EVGAAYPVTQLVRQAARKGYAGLEFAEGIPGSVGGALVMNAGAYGSEIEKVVERVDAI
                     DRDGQALVFSREQMTFSYRDSHLPAGTVVTAVVLRLRRGEAAQVNAKLRELVGKRKSS
                     QPSGFPNSGSMFRNPPGDFAGRLIEASGLKGQRNGQAQIAERHANFIVNLGGAKATEV
                     RQLMELAQSEVRRRFNINLIAEVKYLGEWSD"
     gene            complement(2310..>2536)
                     /locus_tag="VLM90_13830"
     CDS             complement(2310..>2536)
                     /locus_tag="VLM90_13830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14102.1"
                     /translation="LDYFFDLGTVGPRVHHQRAADAAGNPLGEFETGVSLARRLARQP
                     GDGVGRANFDFDSVAAIGCRYVSWAMAAMS"
BASE COUNT          476 a          834 c          726 g          500 t
ORIGIN      
        1 caaaccggcg gcgatatcgt tggtcacatg attgccgccg atgctgagca ccgcagtatg
       61 cttcaccgtg ccgtcatgaa ataccgtgat atcggtggtg ccgccgccca tatcgacgag
      121 aaccacgccc aactcgcgct cctcctcggt gagcactgct tcggcggcgg ccagcggcgt
      181 gagcacgatc tcggcaacat tgaggccgct gcgattgcag cacttgacga tgttctgcac
      241 cgaggtcacc gcgccagtca ccacatggac tttagcttcc aagcggacgc ccgacatgcc
      301 caacggttct ttaatgccgt cctgctcgtc gatgatgtag tcctggggca agacatgcag
      361 gacttcgcgg tccagcggga tcgccaccgc cttggcggcg tcgatcaccc ggtcgagatc
      421 gcgctgggtg acctctttgt acttcaccgc gacgatgcca tggctattga acgatttgat
      481 atggccgccg gagacggtcg cgaacaccgt gtgaatttcg cagccggcca tcaacgccgc
      541 ttcctgcacc gcgcgcttga tcgagcttac ggtgctttcg atgttgatga cgaccccctt
      601 gcgcaggcct gctgacaggt ggctgccgac gccgatgatg tcgacgccat gctcggtcat
      661 ctcgccgacc acggcgcaaa cttttgatgt gccgatatcc aagccgacaa ctatggtatt
      721 tttcttcgcc atatccttcg atctgccagt gctagttaat cccgccggcg cctctactcc
      781 tttttaccgc gcaaacgcgc caccacttga tcgcgaaaac tcatatccaa agacgctaac
      841 cgctcctcgt tgcctttcca taattccagc aaacggtcca agtgcgcgag cttctcctcc
      901 cagtcacccc agcccaggcg ccaagccacc gggaatttcg tcggatagac caccagccgg
      961 tccggcgctt cgaagtgaat ctccgacagc gcgtgggatc gctgcgccat caaatcggtc
     1021 aagcgtatgg cgtcgcggat gcgctgacgc gccgccggat cgccgcgcat tagcccttcg
     1081 gcatagacac cggtgagcat gggatacttg atgctctcac ccgaggcgac ttctttgaac
     1141 accacggcgt cggcgtcgat gtagtaaagc ttgccgacgc cgacgatcgc tttgggtctg
     1201 cgctcctcta cgtcaataac gacccggcgc gggaaatctc ggcgcaccaa cacccggcgc
     1261 acccaagggt gtttggcgat tctattctcg agggcgaccg cgtcgacgtt ccagatattc
     1321 atcccttggc gcagtccggc ggcggcgacg atctcgtcgc cgccgacctt gtcgccgcca
     1381 tggacctcga tctggcgcac ggcgaaatag cggttgtcgg cgaaaaaatc tcgcgtcgag
     1441 cgcgcgacaa tggccagcgg gccgctgaga agatagagca gggctccggc aatcagcagc
     1501 gatgccacca tgccggcgat caaccagcgg cgccggccac gctgctgatc gcgcttgcga
     1561 ttgtctcggt ggtgaacttt caattgcata gggattcgac taatccgacc actcgccgag
     1621 atacttcact tcagcgatca aattaatatt gaaacggcgg cgcacctcgc tctgggccag
     1681 ctccatcaac tggcgcacct cggtggcttt ggcgccgccg aggttgacga tgaagttggc
     1741 atggcgctcg gcgatctgcg cctggccgtt ccgctggccc ttcaaaccgc tggcttcgat
     1801 caatcggccg gcgaagtctc ccggcggatt gcgaaacatc gaccctgagt tggggaatcc
     1861 cgacggctgg ctgcttttcc gtttgcccac cagttcgcgc aatttggcat tcacctgtgc
     1921 cgcttcaccc cggcgcaacc gtagcactac ggccgtcacc accgtgcccg cgggtagatg
     1981 cgaatcgcga taactgaacg tcatctgctc gcgggagaag accagcgctt ggccgtcacg
     2041 atcgatcgcg tcaacgcgct cgacgacttt ttcgatctcg gaaccgtagg cccccgcgtt
     2101 catcaccagc gcgccgccga cgctgccggg aatcccctcg gcgaattcca ggccggcgta
     2161 tcccttgcgc gccgcctggc gcaccagctg ggtgacgggg taggccgcgc caacttcgac
     2221 ttcaatattt tcgccaacct catgccatac gatctttttg aactcaccgg ttaaatgaat
     2281 caccgcgccg cgcacgccgc ggtcgctgat caggacattg ctgccattgc ccaggagaca
     2341 taacggcacc cgatggcggc gacgctatcg aagtcgaagt tggcgcggcc tacgccgtca
     2401 cccggctggc gcgccaggcg gcgcgcaagg gatacgccgg tctcgaattc gccgagggga
     2461 ttcccggcag cgtcggcggc gcgctggtga tgaacgcggg ggcctacggt tccgagatcg
     2521 aaaaaatagt cgagcg
//
LOCUS       DATIRS010001088         2136 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_81413, whole genome shotgun sequence.
ACCESSION   DATIRS010001088 DATIRS010000000
VERSION     DATIRS010001088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2136
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81413"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..951)
                     /locus_tag="VLM90_13835"
     CDS             complement(<1..951)
                     /locus_tag="VLM90_13835"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14103.1"
                     /translation="MKRISGLIFGTCVLLYQALGLAQNKFLLGYSSFSSNQTPLWVAK
                     EEGLFKRYGSDPDLILIEGGTRGAQALISGDIPIMGMSGQPVISARARGADLTMFAGM
                     VNKMNYILVTSAAIKKPEDLKGRRIGAAQAGTASYHAVLLGLKHWGLDARRDRITILQ
                     LGNQAARVGSLQSGGSDAIIVNPGLGAVLKERGNSILADFTELPIPYPQQTMSIRERT
                     IKNDPEFVERALKGIVAGNSFSLDPRNKERVKQVIAKYLRLDRVEKAEEHYQSALKVL
                     PPKPYVDSAGIVSMIEFITESDPLVAKIKPDMVINHSILKK"
     gene            complement(1024..>2136)
                     /locus_tag="VLM90_13840"
     CDS             complement(1024..>2136)
                     /locus_tag="VLM90_13840"
                     /inference="COORDINATES: protein motif:HMM:NF014476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine cyclodeaminase family protein"
                     /protein_id="HSQ14104.1"
                     /translation="LHEREADMPLFLNNDEIAELITMKDTMEALEVIYMEMGEGAAVT
                     APRSDVHSPTAAAQSAEGPMAHYLKSMSGASPHFGTAALRFSSDIVAWRDSAGGMRRE
                     KLPMLPGQRWRGVMLLFSSANGELLAVMNDGVLQRFRVGGANGVSTKYLARANAETVG
                     LIGSGWQAGTQVLAVCEARKIKRINVYSPTKANRENFARETSAQVGVEIVPVDSYEAA
                     AKNVDILITSTNARKPFLGKWALREGLHISAMQRDEFDDEALMACQPLVLHTHSTENN
                     VTSSALAHFERDDFTLRDHPTTRSIDWQSLPTLPDLICRRIKGRENDRQITGFVNNIG
                     MGAQFAAVGKKVYDAAQAKGLGREVPGEWFTQDVHP"
BASE COUNT          428 a          640 c          589 g          479 t
ORIGIN      
        1 ttttttcagt atcgaatggt tgatcaccat gtcgggtttg atcttggcca ctaacggatc
       61 ggattcggtg atgaattcga tcatcgatac gatgccggcg ctgtcgacat aaggttttgg
      121 cggcagcact ttgagcgccg attgataatg ctcctcagcc ttctcgactc gatcgagtct
      181 taaatacttg gcgatgactt gcttgacccg ctccttgttc cgcggatcga gactgaaact
      241 gttaccggcg acgatgccct ttagcgcgcg ctcgacaaac tctgggtcat tcttaattgt
      301 ccgctcacga atgctcatgg tttgctgtgg atagggaatc ggcaactcgg tgaaatcggc
      361 caggatcgaa ttaccacgtt ccttcagcac cgccccgaga ccgggattga cgatgatcgc
      421 gtcgctgcca ccggactgta acgaaccgac ccgcgcggct tgattgccca attgaagaat
      481 cgtgatgcga tcgcgccggg catcgaggcc ccaatgcttc aaaccaagta acacggcgtg
      541 ataggacgcc gtgccggctt gcgccgcgcc gatccgcctg cctttgagat cttcgggttt
      601 cttgatcgcc gctgacgtta ccaagatgta attcatctta ttgaccatgc cggcaaacat
      661 ggtcagatcg gcgccgcgtg cccgcgcgct aatcaccggc tggcccgaca tgcccatgat
      721 cggtatgtct cccgaaatca acgcttgggc gccgcgtgtg cccccttcga tcaaaatcaa
      781 atccgggtcg ctgccgtaac gtttaaacag cccctcttct ttagcaaccc aaagcggcgt
      841 ttgattggaa ctgaaggacg aataaccgag cagaaactta ttctgcgcca accccagggc
      901 ctgataaagg agtacacagg tgccaaagat gagaccagat attcgcttca ttttaagctc
      961 cttggttggc gatatccaat ctaaacctag aaattagaaa cagcgccgct cgggcggacg
     1021 ccactacgga tggacatcct gggtaaacca ctcccccggc acttctcgtc ccaacccctt
     1081 agcctgcgcg gcatcgtaaa ccttcttccc gaccgcggcg aattgcgcgc ccatgccgat
     1141 gttattgacg aagccggtga tttgccgatc gttttcgcgt cccttgatcc gtctgcaaat
     1201 aagatccggc aaggtcggca gagactgcca atcgatggag cgagtcgttg gatggtcgcg
     1261 cagggtgaaa tcgtcgcgct cgaaatgggc cagcgccgaa gaagtcacat tgttctcagt
     1321 cgaatgcgtg tgcagcacca acggttgaca ggccattaac gcttcgtcgt cgaattcatc
     1381 gcgctgcatg gcgctgatgt gcaagccttc gcgcaacgcc cacttgccga gaaacggctt
     1441 gcgcgcattg gtcgacgtga tcaggatgtc gacatttttg gccgccgcct cgtaggagtc
     1501 caccgggacg atctcaacgc cgacctgggc gctggtttcc ctggcgaaat tttcccggtt
     1561 ggctttggtc ggactgtaga cgttgatgcg cttgatcttg cgcgcctcgc atacggctaa
     1621 cacctgggtg ccggcctgcc agccggaacc gatcaggccg acggtttcgg cattggcccg
     1681 cgccaggtat ttggtcgaca cgccgttggc gccgccgaca cggaagcgct gcaagacgcc
     1741 gtcgttcatc actgccagca actcaccgtt ggccgaactg aaaagcaaca tgactcccct
     1801 ccagcgctgc cccggcagca tcggtagctt ttcccggcgc atgccgccgg cgctgtcgcg
     1861 ccaggcgacg atgtcggatg aaaagcgcag cgccgcggtg ccaaagtgcg ggctggcgcc
     1921 gctcatgctt tttaaataat gcgccatcgg cccttcggcg ctctgtgccg ccgccgtggg
     1981 actatgcacg tcggagcgcg gtgcggtgac ggctgctcct tcgcccattt ccatatagat
     2041 aacttccagc gcctccatcg tgtctttcat cgtgatcagc tcggcgatct catcgttgtt
     2101 gagaaatagc ggcatatcgg cctcgcgttc gtgaag
//
LOCUS       DATIRS010001089         1950 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1262832, whole genome shotgun sequence.
ACCESSION   DATIRS010001089 DATIRS010000000
VERSION     DATIRS010001089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1950)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1950)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1950
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1262832"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..255)
                     /locus_tag="VLM90_13845"
     CDS             complement(<1..255)
                     /locus_tag="VLM90_13845"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HSQ14105.1"
                     /translation="MTHEHLIGELRAIVGPPYVLIDRADVIVYEQDGSIFQVMPEIVV
                     LPANVEEVSAVVKAAQRANVPIVPRGSGTGLAGGAVPAEGG"
     gene            393..1565
                     /locus_tag="VLM90_13850"
     CDS             393..1565
                     /locus_tag="VLM90_13850"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HSQ14106.1"
                     /translation="MTQENAEKLETTKVSRRNVLKAAIAAGGAAALGFPNIVKSQGVT
                     SMRWQSTWPAKDIFHEYANDFAKKINDMTGGELKIEVLPAGAVVPAFGLLDAVSKGTL
                     DGGHGVLVYHYGKQTALALWGSGPAYGMDANMLLSWHKYGGGKELLTKLYASIGANVV
                     SFPYGPMPTQPLGWFKKPIQKADDFKGLKFRTVGISIDVFTGMGAAVNALPGGEIVPA
                     MDRGLLDAAEFNNASSDRILGFPDVSKVCMLQSYHQNAEQFEIMFNKTKYDALPAKMK
                     STIEYAVEASSQDMSWKAIDRYSKDYMEMQTKDKVRFYKTPDALLQGQLNAYDAAAAK
                     KSADNPLFKEIAESQRQFAERAVKWDLDTNVQRRMAYNHYFAKAAARPAAPAAKKG"
     gene            1636..>1950
                     /locus_tag="VLM90_13855"
     CDS             1636..>1950
                     /locus_tag="VLM90_13855"
                     /inference="COORDINATES: protein motif:HMM:NF016200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HSQ14107.1"
                     /translation="MKAQSLLRIVDQISYWVGKTFAWLIVAATFVIAVEVFKRYILNA
                     PTAWIYDLNNMLYGTLFMMCGAYTLALAGHVRADFVYLYLKPRSQAALDLALYLLFFV
                     PGI"
BASE COUNT          411 a          553 c          577 g          409 t
ORIGIN      
        1 gccgccctcg gccggcaccg cgccgccggc taggccagtg cccgagccgc gcggcacgat
       61 cggcacattg gcgcgctgcg ccgctttaac caccgctgaa acttcttcga cgttggccgg
      121 taggacgacg atctccggca tcacctggaa gatcgacccg tcctgttcgt agacgatgac
      181 gtctgctctg tcgattaaga cgtagggtgg gccgacgatg gcgcgcagtt cgccgattag
      241 atgctcgtgg gtcacggcca ggagcgtagc ggagtggaga agtatgtgtc aacctgccgg
      301 gcgaagacgg tagggattga cattgacgcc aattgacgaa gtgtatataa gcggaaagct
      361 aatccgtcac aagtcccgag ggagggaatc gcatgactca agagaacgct gagaagctgg
      421 aaaccacgaa ggtgtcgcgg cgcaatgttt tgaaagcggc aattgctgcc ggtggtgcgg
      481 cggcgctggg ctttcctaac attgtcaaat cccagggtgt gacctcgatg cgttggcaga
      541 gcacctggcc ggcaaaggac atctttcacg agtacgccaa tgacttcgcc aagaagatta
      601 acgacatgac cggcggcgaa ttgaagatcg aagttttgcc cgcgggcgcc gtggtgcccg
      661 ccttcggcct gctcgacgcg gtctcaaagg ggactctcga cggcggtcac ggcgtgctcg
      721 tctatcatta cggtaaacag acggcgctgg cgttatgggg ttcaggtccg gcgtatggca
      781 tggatgccaa catgctgctg tcgtggcaca aatatggcgg cggcaaggag ctgctcacca
      841 agctttacgc ttccatcggc gccaatgtcg tatccttccc ttacgggccg atgccgacgc
      901 agcccctcgg ttggtttaag aaaccgattc agaaggcgga tgacttcaag ggtctcaaat
      961 tccgcactgt cggtatctct attgacgtgt ttaccggcat gggcgcggcg gtgaacgctt
     1021 tgccgggcgg cgaaatcgtc ccggcgatgg accgtggctt acttgacgcc gccgagttca
     1081 acaacgcctc ctccgaccgc atcctaggct ttcccgatgt ctccaaagtc tgcatgttgc
     1141 aaagctatca ccagaacgcc gagcagtttg agatcatgtt caacaagacg aaatacgatg
     1201 cattgccggc gaagatgaag tcgactatcg agtacgcagt cgaggcgtcc tcgcaggata
     1261 tgtcgtggaa ggcgatcgat cgctattcga aagattacat ggaaatgcag accaaggaca
     1321 aagtcaggtt ctacaaaacg ccggatgcgc ttttgcaggg tcagctcaac gcctacgacg
     1381 cggcggcggc gaagaaatcg gccgataatc cattgttcaa ggagatcgcc gagtcgcagc
     1441 gccaattcgc cgagcgcgcg gtcaaatggg atctcgacac caacgtgcag cggcgcatgg
     1501 cgtacaatca ttatttcgcc aaggcggctg ccagacccgc ggcccctgcg gctaagaaag
     1561 gttaatcgca ccgcgcagtt ttgctttatc gccagccatc cgggatcgac cggatggctg
     1621 tttttttatc cccccatgaa ggctcaatcg ctgctgcgca tcgtcgatca aatcagttac
     1681 tgggtcggca agacctttgc ctggttgatc gtcgcggcga cgttcgtaat cgccgtggaa
     1741 gtcttcaagc gctatatctt gaatgcgccg accgcttgga tctacgactt gaacaacatg
     1801 ctctacggca cgctgttcat gatgtgcggc gcttatacgc tggcgctcgc cggtcatgtg
     1861 cgcgccgatt tcgtctattt atacctcaag ccgcgcagcc aggcggccct cgacctggct
     1921 ttatacctgc tgttcttcgt ccccggcatc
//
LOCUS       DATIRS010001090         1740 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_476014, whole genome shotgun sequence.
ACCESSION   DATIRS010001090 DATIRS010000000
VERSION     DATIRS010001090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_476014"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..687
                     /locus_tag="VLM90_13860"
     CDS             <1..687
                     /locus_tag="VLM90_13860"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HSQ14108.1"
                     /translation="AEKSGLKGLVLDLRNNPGGLLNQAVRVSDLFLDSGLIVYTDGRI
                     ESQKQKFFAQKEGTWMDFPVVVLVNGGSASASEIVAGAMQDHKRAVVLGTKSFGKGSV
                     QTILPLDDNSALRLTTARYFTPKGRSIQATGIVPDIVIENIVLQDGKPDERKRPSLRE
                     ENLPGHLNNPQQNSAKEQEQIDREREKQIPTSGPTGDETIDNDQQLKRALDLLKSWDV
                     FKQVVQKKAA"
     gene            765..>1740
                     /gene="xseA"
                     /locus_tag="VLM90_13865"
     CDS             765..>1740
                     /gene="xseA"
                     /locus_tag="VLM90_13865"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HSQ14109.1"
                     /translation="MARPTAKGVDLPLFASESRKFLTVSELNERIKGTLESRLDALWV
                     QGEISNFRMPPSGHFYFTLKDDKSQISAVMFRRQGAMLRFTPENGMAVLCFGRVSVYS
                     VRGDLQLYVDDMEPQGQGALALAFEQLKRKLAAEGLFAAERKRELPFLPHSIGIVTSG
                     KGAALHDMLRIITDRFPDRRIVICPVKVQGEGAAREIAEAIGDLNRFGAVDVIVAGRG
                     GGSLEDLWAFNEEVVARAIFASHVPVVSAVGHEIDFTIADFVADARAPTPTAAAEMVL
                     PRKRDLVEQMDNLQSRLASGMEFKLDNLRESFQGLVKRLADPGRKLREN"
BASE COUNT          356 a          495 c          537 g          352 t
ORIGIN      
        1 gcggagaaga gcggcctcaa aggactggtt ctcgatctgc gcaacaatcc aggcgggttg
       61 ttgaatcagg cggtgcgagt ctcggacctg tttcttgact ccggcctgat cgtttacacc
      121 gatggccgca tcgagtcgca aaagcaaaaa ttcttcgctc agaaggaagg cacctggatg
      181 gatttcccgg tggttgtgct ggtcaacggc ggcagcgcga gcgcctcgga gatcgtcgcc
      241 ggcgcgatgc aggatcacaa gcgggcggtc gtgcttggaa ccaaatcctt cggcaaaggg
      301 tcggtgcaga cgatcttgcc gctagacgat aactcggcgc tgcggctgac cacggcgcgc
      361 tacttcacgc ccaagggtcg ttcgattcag gccaccggca tcgttcccga tatcgtcatt
      421 gaaaacatcg tattgcagga tgggaaaccc gacgaacgga agcggccgag tttgcgcgag
      481 gaaaacttgc ccggccactt gaacaacccg cagcaaaact ccgctaaaga acaagagcaa
      541 atcgatcgcg agcgggaaaa gcagatcccg acctccgggc ccaccggtga cgagaccatc
      601 gataacgatc agcagctcaa acgcgcgctt gatctattga agagttggga tgtcttcaag
      661 caggtggtgc agaaaaaggc tgcgtaattt ttcgctcaac attgtgtcga caaaaaaggc
      721 catcctctcg gagggccttt ttttttgtgt tacagtcgtg gcacatggcg cgtcccactg
      781 ccaaaggagt cgatctgccg ctgttcgcca gcgaatcccg caagtttcta accgttagcg
      841 aactcaacga gcggatcaag ggtacgctcg agtctcgact cgatgcgctt tgggtgcagg
      901 gcgaaatctc caactttcgc atgccgcctt cgggtcactt ctacttcacc ctgaaagacg
      961 acaaaagcca gatctcggcg gtgatgtttc gccgccaggg ggcgatgctg cgcttcacgc
     1021 cggagaacgg catggcggtg ctctgcttcg gccgggtgag cgtttacagc gtgcgtggcg
     1081 atttgcagct ttatgtcgac gacatggagc cgcaagggca gggagcgttg gcgctggcct
     1141 tcgaacagtt gaagaggaag cttgccgccg aaggcctgtt cgccgccgag cgcaagcgcg
     1201 agctgccgtt cctgcctcat tcgatcggca tcgtcacttc cggtaagggc gccgcgttgc
     1261 atgacatgct gcggattatc accgaccgct ttccagaccg tcgtatcgtt atttgtccgg
     1321 taaaagtcca aggcgagggc gcggcgcggg agatcgccga ggccatcggc gatctcaatc
     1381 gtttcggcgc cgtcgatgtg atcgtcgccg gccgcggcgg cggttcgctg gaagacctct
     1441 gggcattcaa tgaggaagtg gttgcccggg cgatctttgc ctcgcacgtc ccggtggtct
     1501 cggcggtcgg ccatgagatc gattttacca ttgctgattt cgttgccgac gcgcgcgcgc
     1561 cgacgcccac cgcggcggcc gaaatggttc tgccgcgcaa gcgcgacctg gtcgagcaga
     1621 tggataattt acaaagccgc ttggcgagcg gcatggagtt caaactcgat aatctgcgtg
     1681 agtcgttcca aggcttggtc aagcgcctcg ccgatcccgg ccgcaagctg cgcgagaatc
//
LOCUS       DATIRS010001091         2098 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_476129, whole genome shotgun sequence.
ACCESSION   DATIRS010001091 DATIRS010000000
VERSION     DATIRS010001091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2098
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_476129"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1928
                     /locus_tag="VLM90_13870"
     CDS             <1..1928
                     /locus_tag="VLM90_13870"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSQ14110.1"
                     /translation="AAVAAQSEAVAEAALDLIEVEYEELPVLIDPLAAAKTDAPLIHP
                     NVADYKGLLHKIDTPSNVFVSLVWKKGVVEEGFRQSDVIVENSYTVPAIHQAYIEPHC
                     SLVRVNTDGTAEVWSSNKSPFNMRDQVGNALQIPPASLIVHSCYVGGDFGGKGDGNDV
                     ALCYALAKKAGRPVKLLIDYTEELMAGNPRHGAVIKIKTGVKKNGLMIAEHIEFIFDS
                     GAYGAYRPQGYLVGAHDAPGPYRVPNCLIEEKYVYTNTMPAGYMRAPGHLQGMFASES
                     HMDVVAKRLNMNPIEFRRMNFMHDGDPSPLGHVIPHIKATETLARAVEVSEFAKPKKK
                     NSGRGCAVGDWVSKGGESYARIAIDEEGTITLSSAVTDTGPGVFTMMRQIVGEELKVP
                     LDAIAVEMLDSDKVLKDTGVRGSSSTRVHGGSALNAAQRARAEILQIAGVAMQAGPDE
                     LLLFDGGVTHGRAERRMTYGEIARANGGPILVEGHYANMSDGPEASLVAQVAEVEVDD
                     ETGEVRVTKLTTAHNTGAILNPLTHQGQIDGSVAMGFGYGLVENLAYDESGKVLAANL
                     GEYKIPNIKDMPPLHTTILQSEFGSGPYNSMSIGETALIPTAAAIANAVADAVGVRIT
                     SLPITAEKVLNALKQRG"
BASE COUNT          451 a          590 c          646 g          411 t
ORIGIN      
        1 tcgccgcggt ggcggcgcag agcgaggcgg ttgccgaggc cgcgctggac ttgatcgaag
       61 tcgaatacga agaactgccg gtgctgatcg atccattggc ggctgcgaaa accgatgcgc
      121 cgctgatcca tcccaatgtc gcagactaca aaggtctgct gcacaagatc gatacgccga
      181 gcaatgtctt cgtcagcctg gtctggaaga agggcgtggt cgaagagggc tttcgccaat
      241 ccgacgtgat cgtcgagaac agctacaccg tgccggcgat tcaccaggct tatatcgaac
      301 cgcattgttc cttggtccgc gtcaacaccg acggcacggc ggaagtgtgg tcgtcgaaca
      361 aaagcccgtt caatatgcgc gatcaggtcg gcaatgcttt gcagatccca ccggcgagtt
      421 tgatcgtcca ttcctgctac gtcggcggcg attttggcgg caagggcgac ggcaacgatg
      481 tcgcgctttg ctatgcgttg gctaagaaag ccggccggcc ggtcaagctg ttgatcgact
      541 ataccgagga gctgatggcg ggcaatccgc gccatggcgc ggtgatcaag atcaagaccg
      601 gggtcaaaaa aaatggcctg atgatcgccg agcacatcga atttattttc gacagcggcg
      661 cctacggtgc ctaccgcccg caaggctatc tggtcggcgc ccatgacgcg cctgggccct
      721 atcgggtgcc caactgtttg atcgaagaaa aatatgtcta taccaataca atgccggcag
      781 gctacatgcg cgctccgggg caccttcaag gcatgtttgc ctccgagagc cacatggatg
      841 tcgtcgccaa gcgcttgaac atgaatccca tcgagtttcg ccggatgaat ttcatgcacg
      901 atggcgaccc gtcgccgttg ggccatgtga ttccacatat caaagcgacc gagacgctcg
      961 cgcgcgctgt cgaagtgtcg gagtttgcca agcccaagaa aaaaaatagc ggccgcggct
     1021 gcgctgtcgg cgactgggtt tccaaaggcg gggagtccta cgcgcgcatt gccattgacg
     1081 aggaagggac aataactttg tcttcggcgg tcaccgatac cggtcccggt gtcttcacca
     1141 tgatgcgcca gatcgtcggt gaagaactga aagtgcccct cgatgccatc gccgtggaga
     1201 tgctcgattc cgataaagtc cttaaagata ccggtgtccg tggcagcagc agcacccgcg
     1261 tccatggcgg ctcggcgtta aacgcggcgc agcgggcgcg cgcggagatt ctccagattg
     1321 ccggcgtggc gatgcaagcc ggtccggacg aactcctgct gttcgacggc ggcgtgaccc
     1381 atggacgggc cgagcggcgt atgacctacg gcgaaatcgc gcgcgccaat ggcggcccga
     1441 ttctggtcga aggccattac gccaacatgt cggatgggcc cgaggcctcc ttggttgctc
     1501 aagtcgctga agtcgaggtc gacgacgaga ccggcgaggt gcgcgtgacc aaactcacca
     1561 ccgcgcataa caccggcgcg atcctgaatc cgttgaccca tcagggacag atcgacggct
     1621 ccgtagccat gggtttcggt tacggcctgg tggaaaacct cgcttacgac gagagcggca
     1681 aagtgctggc ggccaatctc ggtgaataca agattcccaa catcaaggat atgccgccgc
     1741 tgcacacgac catcttgcag tccgagttcg gcagcggacc atacaatagc atgagcatcg
     1801 gcgagaccgc cctgatcccg accgcggcgg cgatcgccaa cgccgtcgcg gatgcggtgg
     1861 gggtgcggat tacttcgctg ccgattaccg ccgagaaggt gctcaatgcc ctgaaacagc
     1921 ggggatagtg agttagtgaa tcggtgattt ggctagtagg gtgtctcacg tggttggttg
     1981 tttatccgga gtaactcacc acgaaggtca cgaagggcac gaagggttcg gatgagcaaa
     2041 ttttttgaac ttcgtgatct acgtggtgaa aaactctttc ccatttggtt gagttcga
//
LOCUS       DATIRS010001092         1648 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1066448, whole genome shotgun sequence.
ACCESSION   DATIRS010001092 DATIRS010000000
VERSION     DATIRS010001092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1648
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1066448"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            179..>1648
                     /locus_tag="VLM90_13875"
     CDS             179..>1648
                     /locus_tag="VLM90_13875"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylsulfatase"
                     /protein_id="HSQ14111.1"
                     /translation="MTALNKRLHYGLSLLAGGVAFFGAIASGQAAASAKKPNILVIFG
                     DDVGYWNLSAYNRGMMGYKTPNIDRIAKEGAIFTDHYAQQSCTAGRAAFITGQSCFRT
                     GLLKVGLPGAKEGLSEKDPTLAELLKPHGYATGQFGKNHLGDRNEHLPTVHGFDEFYG
                     NLYHLNAEDEPEHPDYPKDPAFKAKFGPRGVMKCKATDKDDTTVDPRFGKVGKQTIED
                     TGPLTKKRMETADEEFLGGALDFMERSHKAGKPFFCWLNSTRMHIYTFLKPESKGKTG
                     LGVYADGMVEMDGMVGQALKKLDDLGIADNTIVVWTTDNGAEVFSWPDGGTTPFKGEK
                     NTNWEGGYRVPLVMRWPGVIKPGTEINHITSHEDFVPTLVAAAGEPAVKEKLLTGYQA
                     AGKTFKVHLDGYDQHVALVVTVEVLAGTGPGKRDEFFYWTDDGNLAGLRYNRWKLVFL
                     DQRAAGLAVWQEPLVPLRFPKLIDIKGDPFERAQTDAGEY"
BASE COUNT          369 a          520 c          483 g          276 t
ORIGIN      
        1 cggatgctgg gaggggctaa ctatttgctc aaaccgctca acgaatctga gctcctcacc
       61 gccatcggcc aagtgattcc ctcgaccgac tagctgccac tcattcccaa cccatttgtc
      121 cgtcgcggcc gcaatcacgg cgcgcgtgga tcgagcccaa aaaaacaaac gagaaaccat
      181 gacagcacta aacaaacgac tgcattacgg cttgtcgctc ttggcgggag gcgtggcgtt
      241 tttcggcgcc atcgcgtccg gccaggcggc ggcttcggcc aagaaaccca acatcctcgt
      301 catcttcggc gacgacgtcg gctactggaa cctcagcgcc tacaatcggg gcatgatggg
      361 ctacaagaca cccaacattg atcgcatcgc caaagagggc gcgatcttca ccgaccatta
      421 cgcgcagcaa tcctgcacgg cgggtcgcgc ggcgttcatc acgggacaat cctgtttccg
      481 caccggtttg ctcaaggtcg gcttgcccgg cgcgaaggaa gggctttccg aaaaagatcc
      541 tacgctggcc gagctactga agccgcatgg ctacgcgacc ggccagtttg gaaagaatca
      601 cctcggcgac cgcaacgagc acctgccgac ggttcacggc ttcgacgaat tctacggcaa
      661 cctctaccac ctcaatgcgg aggatgagcc ggagcatccc gactatccga aggatcccgc
      721 gttcaaggcc aagttcggcc cgcgcggtgt catgaaatgc aaggcgaccg acaaggacga
      781 cacgaccgta gacccccgtt tcggcaaggt tggcaagcag accatcgagg acaccggacc
      841 gctgacgaaa aagcgcatgg aaaccgcgga cgaggagttc ctcggcggcg cgctcgattt
      901 catggaacgc tcccacaagg cagggaagcc gttcttctgc tggctgaact cgacccggat
      961 gcacatctac accttcctca agccggaatc gaaagggaaa accggtctgg gcgtctatgc
     1021 ggacggcatg gtcgagatgg acggcatggt cggccaggct ttgaaaaaac tcgatgacct
     1081 aggcattgcc gacaacacca ttgtcgtctg gacgactgac aatggcgcgg aagttttctc
     1141 atggccggat ggcggcacca cgccgttcaa aggcgagaag aacaccaact gggaaggcgg
     1201 ctaccgcgtg cctttggtga tgcgctggcc cggcgtgatc aagccgggca ccgagatcaa
     1261 tcacatcacc tcacacgaag acttcgtgcc gacgctcgtc gccgcggccg gggaaccggc
     1321 ggtgaaggaa aaactgctca ccggctacca ggccgcgggc aagaccttca aagttcacct
     1381 cgacggttac gaccagcacg tcgcgctggt cgtaaccgtc gaggtgctgg ccggcaccgg
     1441 cccgggcaag cgcgacgaat ttttctactg gaccgacgac ggtaatctcg cgggactgcg
     1501 ctacaaccgg tggaagctcg tcttcctcga ccaacgcgcc gcgggtcttg ccgtctggca
     1561 ggagccactc gtgccgctgc gctttccgaa gctcatcgac atcaagggcg atccgttcga
     1621 gcgggcgcag acggacgccg gcgaatat
//
LOCUS       DATIRS010001093         1588 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_179884, whole genome shotgun sequence.
ACCESSION   DATIRS010001093 DATIRS010000000
VERSION     DATIRS010001093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1588
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_179884"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..732
                     /locus_tag="VLM90_13880"
     CDS             <1..732
                     /locus_tag="VLM90_13880"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ14112.1"
                     /translation="LCHAYNYFISDYCKASPRLKAVENLPVNDPAECAKELNRAVTKL
                     GLCGGMIVAQAHRKNLGSPEYYPLYEEAQRLNTPVSIHAFGGDEPGSEVFDQFISLHT
                     CGHPFPILRQLTAMVFGGIPELFPKLRIGYLEVGCGWLPYWAERMDEEWEKRGKVEAP
                     LCKKKPSEYLYSENSFYGCEPEEKMIGYVTKEIGSKTLMYASDYPHWDMSWPESATIL
                     WNRDDISLDVKKDLLLNNAKRFYNI"
     gene            891..>1588
                     /locus_tag="VLM90_13885"
     CDS             891..>1588
                     /locus_tag="VLM90_13885"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSQ14113.1"
                     /translation="MIQTKGLTGAQSMLRVLGKMGVEKIFASPGSEWSPLWEALAEPG
                     VEGMPQYYSTRHEEIAVGMASGYAKSTGKLPAVVIHTTVGALHATMAMRAALHEQVPM
                     VVFAGESIGFGEDEGPDVGCQWQGHLGDMGGPAKLVDHTVKWSFGVNTKSIVPSTVQR
                     ACRLAMAGPRGPVFVSMPMEYMFDTMTKDVPSDLGSSPLATADPAGIEDLANLLAGAQ
                     NPVIVAEDAGKTLK"
BASE COUNT          338 a          436 c          504 g          310 t
ORIGIN      
        1 ctgtgccacg cctacaatta tttcatctcg gactactgca aagcgtcgcc gcgtcttaaa
       61 gccgtggaga atctgccggt gaacgatccc gccgaatgcg ctaaggaatt gaatcgcgcg
      121 gttaccaagt tggggctctg cggcggcatg atcgtcgccc aggcacaccg caagaatctc
      181 ggcagcccgg aatactatcc gctctacgaa gaggcgcagc gtctcaacac gccggtctcg
      241 atacatgcct tcggcggcga tgagccgggc agcgaggtgt tcgatcagtt tatcagcttg
      301 catacttgcg gccatccgtt cccgatactc cgtcagctca cggcgatggt gttcggcggg
      361 attccggagc tgtttcccaa gctgcgcatc ggttatcttg aggtcgggtg cggctggctg
      421 ccgtactggg ccgagcgcat ggatgaagaa tgggaaaagc gcggcaaggt cgaggcgccg
      481 ttgtgcaaga aaaagcccag tgagtatctg tacagtgaga acagcttcta tggctgcgaa
      541 ccggaagaga aaatgatcgg ctacgtgacc aaggagatcg gctcgaagac cctcatgtac
      601 gcttccgatt atccgcattg ggacatgagc tggccggagt cggcaacaat tctgtggaat
      661 cgcgacgata tctcgctcga cgtgaagaaa gatttgctgc tcaataacgc taagcgtttt
      721 tacaatattt aatcgagctg tcattctccc gcaaacgagg aatcgcgatt ggccgcccgg
      781 cggcgagtcg gattcctcgt tgctttgcgc gcccgaggat gacatagaaa agggcgcaat
      841 gcgcatagtg ccgctttaac aacaaccgta atttttgaga ggagccgagc atgattcaaa
      901 ctaaaggatt gaccggcgcg cagtcgatgc tgcgtgtctt ggggaaaatg ggcgtcgaga
      961 agatctttgc atcgccgggg tcggaatggt cgccgctgtg ggaagcgctg gcggaacccg
     1021 gcgtggaagg aatgccgcaa tattacagca cgcgccatga agagatcgcc gtcggcatgg
     1081 ccagcggcta cgccaagtcg accggcaaac tgcccgcggt ggtgattcac accacggtgg
     1141 gcgcgctcca tgcaaccatg gcgatgcgcg cggcgttgca cgagcaggtg ccgatggtgg
     1201 tgttcgccgg cgagtcgatc ggtttcggcg aagacgaagg accggatgtc ggctgccaat
     1261 ggcagggcca cctgggcgac atgggcgggc cggccaagct ggtcgatcac acggtcaaat
     1321 ggagcttcgg tgtcaatacc aagtcgatcg tgccttccac agtgcaacgc gcctgccgcc
     1381 tggccatggc gggaccgcgc gggccggtgt tcgtgtccat gccgatggaa tatatgttcg
     1441 ataccatgac caaggatgtg ccgtcggatc tcggcagttc gcctctggcc accgccgatc
     1501 ccgcgggcat cgaggatctc gccaacctgc tggcgggcgc gcagaacccg gtgatcgtcg
     1561 ccgaagatgc cggcaagact ttgaagag
//
LOCUS       DATIRS010001094         3067 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1361133, whole genome shotgun sequence.
ACCESSION   DATIRS010001094 DATIRS010000000
VERSION     DATIRS010001094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3067
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1361133"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            191..1168
                     /locus_tag="VLM90_13890"
     CDS             191..1168
                     /locus_tag="VLM90_13890"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14114.1"
                     /translation="MNFRFGIFVLIILATATSAGAQQKVRLNWGAISGVMSGIVVAQE
                     EGLFKKHGLDLELIHIASTSRAIQSMLSGEIHYTTADALNSIQAVGAGADIVMFCAGV
                     NRVVFSIMARPDIKRVADLKGKKIGITRIGSSTHTAVLHVVNKAGLGSNDYALLQLGE
                     VPNILTTLLAGQIDAGALSPPTNSRAKKAGLHELVNLGVDGPEYPSTVIASTRAYVKA
                     NPDNTRRLVRALGEGVVIFKTNRQVGIKAIQKYTRLNDADILGDTYNQFRDAFDAIPY
                     VSRAGINSLLANLAEKDAKIRQLKFDDVADMRFVGEIEKEGFFQKLTAK"
     gene            1462..>3067
                     /locus_tag="VLM90_13895"
     CDS             1462..>3067
                     /locus_tag="VLM90_13895"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HSQ14115.1"
                     /translation="MLTQTWKTSERKYRVREARDCAIPTADGTKLNSYIYRPSAEGKF
                     PVILGVCAYSLEDQIAPIMPVGAGGIRGHMEAGDPNFYVSRGYVHVILNVRGTGKSEG
                     YYDFLGPQEIQDVYDAIEWLAKQEWCNGKVGMFGPSYFTMVQKRVAALNPPSLKCIFA
                     MYGLTDLYRDLDYHGGILHHNFRTRWIAKLPNLRFKNRMKEKLGEDEYRRRVQAALND
                     PEIAAIPALVEALRDPDKGRNAWIVEPLVMPQDSSFWQDWHAASQGELKIPAYLGSCW
                     GVYGIHLAGDMRSWEEWQGAKKFTVGPPIYLDRPVYQYHYESLRWFDLWLKDNDTGLM
                     DEPRVQVFLDGGEGEWIEANQWPLPQTRWTPFYLHEHGLLSEHEFWPNEAPTVYVDSP
                     YERGAALFRTPAMVEATDICGPLSLTLYASTTDNEILWFVQLLEVDPQGTERLLTRGW
                     LRGSQRRIDPKRSKPWAPYHSHDKREPLTANEIYEFNIEIRPYGIRLRPGFGLAIRIS
                     GDAGGPPSHHLHGIGSGHVARQSSSRV"
BASE COUNT          637 a          876 c          908 g          646 t
ORIGIN      
        1 cgacgcgcgc atcaccggca aaggcggctt gtatgcgagc cgcgaccgcg gcgactcgtg
       61 ggcgccggtg ctgaaggaca cgccgtctgt gctgaccgcg tgggtagcgc cggcatagcc
      121 ggcgcgttca agggttcgga tggcttccct gtggtagggg cgactggcgg tcgccctttc
      181 ttttctcaat atgaatttcc gattcggcat attcgttctt attatcctcg cgacggcaac
      241 ctccgccggc gcccagcaga aagtccggct caactggggc gccatcagcg gggtcatgag
      301 tggtatcgtg gtggcgcagg aggagggtct gttcaagaaa catggtctcg atcttgagct
      361 gattcatatc gcgtcgactt cgcgggcgat ccagtcgatg ttgtccggcg aaattcacta
      421 cacgacggcg gatgcgctga atagtattca agccgtcggc gccggcgccg atatcgtgat
      481 gttctgtgca ggggtcaatc gcgttgtctt ttcgatcatg gcgcggccgg atatcaagcg
      541 ggtggcggat ttgaaaggca agaagatcgg tatcacgcgc atcggctcgt cgacccacac
      601 cgcggtgctc catgtcgtca acaaagccgg cctggggtcc aacgactatg ccctgctaca
      661 gctaggtgaa gtgccgaaca tattgacaac tttgctcgcc ggccagatcg atgccggggc
      721 gttgtcgccg ccgaccaata gccgggcgaa gaaagccggg ctgcacgaac tggtcaatct
      781 tggtgtcgat ggtcccgaat atccgtccac ggtcatcgcc agcacgcgcg cttatgtcaa
      841 agccaatccc gataacaccc ggcgcctggt gcgggcgctc ggcgagggcg tggttatctt
      901 caagaccaac cggcaagtcg gcataaaagc gattcaaaaa tatacgcgct tgaatgacgc
      961 ggatatactc ggcgacacct acaaccagtt tcgcgatgct ttcgatgcta ttccttacgt
     1021 cagcagagcg ggtatcaatt cgctgctcgc caatttggct gaaaaggatg cgaagattcg
     1081 ccagttgaaa ttcgacgacg tggcggatat gcgctttgtc ggtgaaatag aaaaggaagg
     1141 tttttttcaa aaacttaccg ctaaatgacc cgagggacaa tgggtttgct ttcctgtggc
     1201 ttcgtcctag cctttgccgc cgtcgcgatc gacaggaact tttacgatgg cgatcgatcc
     1261 aaacgccaga cgtgaagtgt gaaatatgcg gcttgtctga gcttgctggc tattctttcc
     1321 agaaaataac ccgctcatgc gtgatgtcgc acccctgggt aaaaagacgc cgcaattgct
     1381 caaacccagc gcgatccgag acctggcgtt tcgctatatg gaaaattgac agcgccgggg
     1441 ttgttggcta tatcggagcc catgctgacg caaacctgga agacttccga gcgtaaatat
     1501 cgcgtgcgcg aagcgcgcga ttgcgcgatc ccgaccgccg atggcaccaa gctgaatagt
     1561 tacatctacc ggccctctgc cgagggaaaa tttccggtga tcttgggtgt ctgcgcttat
     1621 tcactcgaag atcaaatcgc gccgatcatg ccggtggggg cgggcggtat ccgcggccac
     1681 atggaagccg gcgatcccaa cttctatgtc tcgcgcggct acgttcacgt gattttgaac
     1741 gtgcgcggca ccggcaaatc ggagggctac tacgactttc tcgggcccca ggagattcag
     1801 gacgtctacg acgcaatcga atggctggct aagcaagaat ggtgtaacgg caaggtcggc
     1861 atgttcggcc cgtcttattt caccatggtg caaaaacgcg tcgccgcgct caatccgccg
     1921 tcgctcaaat gcattttcgc catgtacggg ctgaccgatc tataccgcga cttggactac
     1981 cacggcggca ttctgcatca caacttccgg acgcgctgga tcgccaagct gcccaatctg
     2041 cgcttcaaga accgcatgaa agaaaaactc ggcgaggacg aataccggcg ccgcgttcaa
     2101 gctgcgctga acgatccgga aatcgccgcg atcccggcgc tcgtcgaggc gctacgcgat
     2161 cccgataagg ggcgcaatgc ctggatcgtc gagccgctgg tgatgccgca ggattcgtcc
     2221 ttttggcagg actggcacgc cgcgagccag ggtgaattaa agattcccgc ttacttgggc
     2281 agctgctggg gtgtttacgg catccatctc gcgggcgata tgcgctcctg ggaggagtgg
     2341 cagggagcga agaagtttac cgtcgggccg ccgatctatc tcgatcggcc ggtctatcaa
     2401 tatcattatg aatctttgcg ctggttcgat ctctggctca aggacaacga caccgggctc
     2461 atggatgagc cgcgcgtgca agtgtttctc gacggcggcg agggcgagtg gattgaagcg
     2521 aaccaatggc cgctgccgca aacgcgttgg acgcccttct atttgcacga gcatggtctg
     2581 ctttccgagc acgagttctg gcccaatgaa gcgcccacag tatatgtgga ctcaccgtac
     2641 gagcgcggcg ccgcgttgtt tcgcactccc gcgatggtcg aagcaaccga tatctgcgga
     2701 ccgctgtcgt tgacactgta tgcatcgacc accgacaacg agatactatg gttcgtacag
     2761 ctgctcgaag tcgacccgca gggcactgag cgtttgttga cgcgcggctg gctcagaggc
     2821 tcacaacggc gcatagatcc gaagcgttcg aagccctggg cgccttatca tagccacgac
     2881 aaacgcgagc cgctgaccgc caacgaaatt tacgagttca atatcgaaat tcgcccctac
     2941 ggtatccggc ttcgtcccgg ctttggcctc gccatccgca tctccgggga cgccggcggc
     3001 ccgccgtcgc atcatctgca cggcatcgga tcgggccatg tggcgcgtca atcgagttcg
     3061 cgcgtga
//
LOCUS       DATIRS010001095         1678 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_771316, whole genome shotgun sequence.
ACCESSION   DATIRS010001095 DATIRS010000000
VERSION     DATIRS010001095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1678
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_771316"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..922)
                     /locus_tag="VLM90_13900"
     CDS             complement(<1..922)
                     /locus_tag="VLM90_13900"
                     /inference="COORDINATES: protein motif:HMM:NF020976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase D family protein"
                     /protein_id="HSQ14116.1"
                     /translation="MNRRRFLKVMGGAGLAMPGLIGVSSCSRQLFNPDAGTGLSLGYV
                     SGDVSADSALVWLRADAGSRVVLDYGKEPDLAQFQTTQARAVDAAADHCAIFALDGLD
                     PATRYYYRAMAEGRTAGPVASFVTAPRADDDAKVTFCFSGDTRQGYKPFTVMHAVRAQ
                     RPDFFLHLGDTIYADRNGTAQTLPEFWDKYRINRDDAAAQRCFAETSVYVMWDDHEVE
                     DNYLPGHPLAPIGRQAFLDYWPVRRSAAEPEQIYRAVRWGRAVDLFVLDTRQYRAFDR
                     STMLGRRQKDWFFDRLGSSSATFKFVATTVP"
     gene            complement(929..1429)
                     /locus_tag="VLM90_13905"
     CDS             complement(929..1429)
                     /locus_tag="VLM90_13905"
                     /inference="COORDINATES: protein motif:HMM:NF015715.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HSQ14117.1"
                     /translation="MDTSSLLMVAAAVLAVLAVYVKSPKAAESGVGAGLSLLIEIAPR
                     MIAAFTLAGLVQAVVPQETIVRWMGQGSGYRGLMIGMTLGSVTPGGPMTHFPVIASLY
                     KVGVGVGPLVAYLTAWSLIGLQRIIMWELPFLGAKLVAIRVAVSLFFPFFAGWLCELI
                     WDKLNV"
     gene            complement(1365..>1678)
                     /locus_tag="VLM90_13910"
     CDS             complement(1365..>1678)
                     /locus_tag="VLM90_13910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14118.1"
                     /translation="GNGLILAWMLGKGKISRSARNDRIAAPSSRMKLGDLAKPKPLGV
                     NCYSLEIFGWALYSQIASLAATNGHPVKRKISRSIKEIDGHIVALDGRRGSPRGARRL
                     C"
BASE COUNT          373 a          535 c          472 g          298 t
ORIGIN      
        1 tgggcacggt ggtcgcgaca aacttaaatg tcgcgctgga gctacccaga cgatcgaaaa
       61 accagtcctt ctgtcgccgc cccagcatgg tgctgcgatc gaaagcgcgg tattgccggg
      121 tatcgaggac aaacaagtcc accgcccggc cccagcgtac cgcgcgataa atctgctccg
      181 gttcggccgc cgagcggcgc accggccagt agtcgagaaa agcttgtctg ccgatgggcg
      241 ccaatggatg gcccggcaga taattgtctt cgacttcatg atcgtcccac atcacgtaaa
      301 cgctggtctc ggcgaaacag cgttgcgccg cggcatcgtc gcggttgatg cggtacttgt
      361 cccagaactc gggcaatgtc tgggctgtcc cgttacgatc ggcgtagatc gtatcgccca
      421 aatggagaaa gaaatccggc cgctgggcgc gcaccgcatg catcaccgta aacggcttgt
      481 aaccctggcg cgtgtcgccg ctaaagcaga acgttacctt ggcatcgtca tccgcgcgtg
      541 gcgccgtgac gaagctcgcc accggccccg ccgtccggcc ttcggccatc gcccggtagt
      601 aataccttgt cgccgggtcc aaaccatcca gagcaaaaat cgcgcagtga tccgcggcgg
      661 cgtcgacagc gcgcgcctga gtggtttgaa actgcgccag atccggctcc ttgccgtaat
      721 cgagaaccac gcgactaccc gcgtccgccc ggagccacac cagcgcgctg tcggcactga
      781 catcgccgct cacgtagcct agcgacaagc cggttcccgc atcgggattg aagagttgcc
      841 ggctgcaact cgacacgccg atcagcccag gcatggcgag cccggccccg cccatgactt
      901 tgagaaacct acgccggttc atgctcactt agacgttcaa tttgtcccaa atcaattcgc
      961 agagccagcc ggcgaagaag ggaaagaaca aactcaccgc cacacgaatc gccaccaatt
     1021 tcgcgccaag aaacggcagc tcccacatga taatgcgttg caagccgata agcgaccaag
     1081 ccgtcaggta cgccaccaag ggtccgacgc ccacgccgac tttgtagagc gatgcgatca
     1141 ccgggaaatg ggtcatcggc ccgccggggg tgacgctgcc caaggtcatg ccgatcatca
     1201 gtccgcgata accggaaccc tgccccatcc agcgcactat ggtttcctgc ggcaccaccg
     1261 cctggaccag gccagccaaa gtaaatgccg cgatcatgcg cggcgcgatc tcgatgagca
     1321 acgagagccc ggcgccgaca ccggactcgg cggccttggg agatttaaca tagacggcga
     1381 gcaccgcgag gactgccgcg gcgaccatca agagcgacga tgtgtccatc gatttcctta
     1441 atgctgcgtg aaatttttct tttgacagga tggccatttg tggcagcgag tgaagcgatt
     1501 tgactgtaaa gagcccagcc gaagatttca agcgagtagc aattcacgcc caggggctta
     1561 ggtttggcga gatcccccag cttcattcgg gatgacggtg cggcaattct gtcatttcga
     1621 gcggagcgag aaatctttcc ctttcccagc atccaagcca gaatcaaacc attaccat
//
LOCUS       DATIRS010001096         3067 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1656520, whole genome shotgun sequence.
ACCESSION   DATIRS010001096 DATIRS010000000
VERSION     DATIRS010001096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3067
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1656520"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..421)
                     /locus_tag="VLM90_13915"
     CDS             complement(<1..421)
                     /locus_tag="VLM90_13915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14119.1"
                     /translation="MPRLSRKPPVRLLLYGFGPYRKFTENITAKIIESLAPRPGLGKI
                     VFPVRFQRRQFIDALRTLRPLMVVGLGQSSRPRIEVETRAINRRRASKSGAPRSITAG
                     GKAWMPASMPLSVTRPAAKSINAGDYVCNFSMYVMLEE"
     gene            complement(496..2454)
                     /gene="thiC"
                     /locus_tag="VLM90_13920"
     CDS             complement(496..2454)
                     /gene="thiC"
                     /locus_tag="VLM90_13920"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: protein motif:HMM:NF006763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HSQ14120.1"
                     /translation="MANTQSPNDTKPIGLTTQPLPASHKVYVHSHQRPEISVAMRAVV
                     LSNAQHGNGNGNGHGAHANAPLMIYDTSGPYTDPEAQTDIRRGLKPMRLDWIRGRGDV
                     EELAGSSYQAPVKKNGKASDPQNERFPDGARRPILRAKAGCNVSQMHYARKGIITPEM
                     EYVAIRENLGRQQAFESNGNGRTHAGYGFGAAIPKFVTPDFVRDEVARGRAIIPSNIN
                     HPESEPMIIGRNFLVKINANIGNSAVASSIEEEVEKMIWATRWGGDTVMDLSTGMDIH
                     ETREWILRNSPVPIGTVPIYQALEKVDGKAEDLTWEIFRDTLIEQAEQGVSYFTIHAG
                     VLLRYVPLTAKRVTGIVSRGGSIMDKWCLAHHQENFLYTHFEEINEIMKAYDVAYSLG
                     DGLRPGCIADANDEAQFGELETLGELTEIAWKHDVQVMIEGPGHVPMNMIHENMTKQL
                     ETCHEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWYGTAMLCYVTPKEHLGLPDKKD
                     VKDGVIAYKIAAHAADLAKGHPGAQERDNALSQARFEFRWEDQFNLSLDPETAREFHD
                     ETLPAQGAKVAHFCSMCGPHFCSMKITKDVRDYAAQLGVQEEAALAAGMKEKAEEFKK
                     SGGKIYQEVDAAAASESAPVTMRAAAKD"
     gene            complement(2492..3061)
                     /locus_tag="VLM90_13925"
     CDS             complement(2492..3061)
                     /locus_tag="VLM90_13925"
                     /inference="COORDINATES: protein motif:HMM:NF024634.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HSQ14121.1"
                     /translation="MKRIEQMSLWERLYFPEVIRGLMVTGYRFWRNLAIHSLQKFGLA
                     ADSSASSTVQYPEEKWLYPDTYRGRHRLTLKIDDTVQCTACYLCATACPAECIYIEAG
                     EYADNSVEKFPIRYEIDTLRCVYCGYCVEACPCDAIRMDSGTHPGNLGFSRKDFVETK
                     EVLMQRSKDLADKGKAGLYEEYVKPYRHV"
BASE COUNT          616 a          903 c          877 g          671 t
ORIGIN      
        1 gctcctcaag cattacatac atcgagaagt tgcagacata gtcgccggcg ttgatcgact
       61 tcgccgcggg acgggtcacg gagagcggca tggatgccgg catccaagct tttccgcctg
      121 cggtgatcga ccgcggcgca ccggacttgc tggcccggcg gcgattgatc gcgcgggtct
      181 cgacctcgat tctcggtcgc gaactttggc ccaagcccac gaccatcaaa ggccggaggg
      241 ttcttagcgc gtcaatgaac tgccggcgct gaaagcgcac cggaaacaca attttgccca
      301 gccccggccg gggcgccaga gactcgatga tttttgccgt aatgttctca gtgaacttgc
      361 ggtacggccc aaagccgtag agcagcaacc ggaccggtgg tttacggctg agacgcggca
      421 tggatgaacc aggtcgaaat ggaactggcc gccagggggc ggccagttca ctggagcata
      481 actcgttagg agcgatcagt ctttcgccgc tgcgcgcatg gtgacgggag cgctttcgct
      541 cgctgccgcg gcgtcgactt cctggtaaat cttgccgccg gatttcttga actcttcagc
      601 cttctctttc atgccggcag ccagggcggc ttcttcctga acgcccaact gcgccgcgta
      661 atcgcgcacg tccttggtga tcttcatgga acagaaatgc ggcccgcaca tggagcaaaa
      721 atgagccacc ttggcgccct gcgccggcaa ggtttcatcg tggaactcac gcgcagtctc
      781 gggatcgaga ctgagattga actgatcttc ccagcggaac tcgaagcgcg cctggctgag
      841 ggcgttgtcg cgctcctggg cgcccggatg gcccttggct aaatcggcgg cgtgggcggc
      901 gatcttgtag gcgatgacgc cgtccttgac gtctttctta tccggcaatc cgagatgctc
      961 tttcggcgtc acataacaaa gcatcgccgt gccgtaccag ccgatcatcg ccgcgccgat
     1021 ggcactggtg atatgatcgt agcccggcgc gatatcggtc gtcagcggcc caagagtgta
     1081 gaacggcgct tcgtggcagg tttccaactg cttggtcatg ttttcatgaa tcatgttcat
     1141 cggcacatgg ccgggccctt cgatcatcac ctggacatca tgcttccagg cgatctcggt
     1201 caactcgcca agggtttcca actcgccgaa ttgcgcttcg tcattggcat cggcgataca
     1261 gccggggcgc aaaccgtcgc ccaatgaata ggcgacatcg taggccttca taatttcgtt
     1321 gatctcttcg aagtgggtgt agagaaaatt ctcttgatga tgggcgagac accatttgtc
     1381 catgatcgag ccgccgcgcg agacgatacc ggtgacgcgc ttggcggtca gcggcacata
     1441 gcgcaagagg acgccggcgt gaatggtaaa ataagacacg ccctgctcgg cctgctcgat
     1501 caaggtgtcg cgaaaaatct cccaagtgag atcctcggcc ttgccgtcga ccttttccaa
     1561 agcctggtag atcggcaccg tgccgatggg caccggtgaa ttgcgcaaaa tccactcgcg
     1621 ggtttcatga atatccatac cggtggacag atccatcacc gtgtcaccgc cccatcgcgt
     1681 agcccagatc atcttttcga cttcctcttc gatggaggac gccaccgccg agttgccgat
     1741 gttagcgttg atcttgacca aaaaattgcg gccgatgatc atcggctcgc tttccggatg
     1801 attaatgttg gagggaatga tcgcccgccc acgggcgact tcgtcgcgca cgaagtccgg
     1861 cgtgacgaac ttggggatcg ccgcgccgaa accgtaaccg gcatgggtgc ggccattgcc
     1921 gttgctctca aaagcttgct gccgtccgag attttcccga atcgccacat actccatctc
     1981 aggcgtgata atgcccttcc tggcgtaatg catctgcgaa acattgcaac ccgctttagc
     2041 gcgcaagatc ggccgccgcg cgccgtcggg aaaccgctca ttctgcggat cgctcgcctt
     2101 gccatttttc ttaaccggtg cttgatagct cgaaccggcc agttcctcga catcgccgcg
     2161 accgcggatc caatcgaggc gcatcggctt taagccccgg cggatatcgg tttgagcctc
     2221 aggatcggta taaggtccag aggtgtcgta gatcattaac ggcgcattgg catgcgcgcc
     2281 gtggccattg ccattgccgt ttccatgttg ggcgttggac aacaccacgg cgcgcatggc
     2341 cacgctgatc tcaggacgtt gatgactatg gacgtagact ttgtgcgagg ccggtagcgg
     2401 ctgcgtggta agcccaatcg gcttggtgtc attcggggat tgcgtatttg ccatgatctt
     2461 gcctccttcg gctggaaaac cgccgccgtg ctcagacgtg gcgatagggt ttgacgtact
     2521 cttcgtaaag tcctgctttg cccttgtcgg ccaaatcctt cgatcgttgc atcaacactt
     2581 ctttggtctc gacgaaatct ttccggctaa aacccaggtt gcccggatgg gttcccgagt
     2641 ccatgcgaat cgcgtcgcaa gggcaggctt cgacgcagta accgcaatag acacaacgca
     2701 gcgtatcgat ctcataacga attggaaatt tctccaccga attgtcagcg tactcaccgg
     2761 cctcgatgta gatgcactcc gccgggcagg cggtggcgca gagataacaa gccgtgcatt
     2821 gcacggtgtc atcgattttc aaagtgagcc gatggcggcc gcgataggtg tcgggataaa
     2881 gccacttctc ttcaggatat tgtaccgtgc tcgacgcgct ggaatccgcc gcgagtccga
     2941 acttttgcag cgaatgaatc gccagatttc gccagaaacg atagccggtg accatcaacc
     3001 cgcgaatcac ttcggggaaa tacagccgct cccacagcga catctgttca atgcgtttca
     3061 tcggtca
//
LOCUS       DATIRS010001097         9339 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_180259, whole genome shotgun sequence.
ACCESSION   DATIRS010001097 DATIRS010000000
VERSION     DATIRS010001097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 9339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9339
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180259"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            91..915
                     /locus_tag="VLM90_13930"
     CDS             91..915
                     /locus_tag="VLM90_13930"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005743 - mitochondrial inner membrane
                     [Evidence IEA];
                     GO_component: GO:0035632 - mitochondrial prohibitin
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prohibitin family protein"
                     /protein_id="HSQ14122.1"
                     /translation="MISNNLIRLVAVVGFFLLLAVAKPFVIVRAGTVGVVYSFGSIVG
                     QVDEGFHLIWPWWFITHTDIKVQRAVLDKLPSFSAETQDVFVRASLNYQVSPKAVQTL
                     FRTVGPDYFHVLIEPRVAQNFKDETVKYKSVDIAPNREKIRQAVRQRLEAELSPYSIH
                     IIDLLLDNVDFSAAFKQSIENKQIATQKALEQEQLVSAAKFSAQQRVETEKGEGEAKL
                     ARAEKEALANQRLSASLTPLLVQHEMIDKLSEKIQIMVVPQGSNFLMQLPNVAALK"
     gene            934..1722
                     /locus_tag="VLM90_13935"
     CDS             934..1722
                     /locus_tag="VLM90_13935"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSQ14123.1"
                     /translation="MDLGLRGKVAMVTGSSDGIGFATARLFAREGARVVLCARREALL
                     NQARDVIIEETRADVLALTCDVQRLKDVKRLVDTTIERFGAIDILVNNAGSVPAIKFS
                     DVNDAQWYEMLERKLLGYLRMTREAVPHMQKAGWGRIVNVAGTAGWEPSHTAMAVGIN
                     NAAVMNWTKSMSLQYGAEGILVTTVAPGSIDTPRQVNNRQREAEVTGISVEELRAVRV
                     KDIPLRRLGRPEEVANLVVFLASECSSYMTGTCVTVDGGVVRGI"
     gene            2175..2609
                     /locus_tag="VLM90_13940"
     CDS             2175..2609
                     /locus_tag="VLM90_13940"
                     /inference="COORDINATES: protein motif:HMM:NF020473.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1844 domain-containing protein"
                     /protein_id="HSQ14124.1"
                     /translation="MAPEEEKQESKGFTVQDRRRFSPETGEAREDTAEAQEAANQASQ
                     QSTAAQERVDGAAQANALPEIDFSTFVISLSTQVLMHLGEIANPASGKVEADISVAKQ
                     VIDILAMLSDKTRGNLNANEAQLMEGILFDLRMKYVEAVKNR"
     gene            2618..4117
                     /locus_tag="VLM90_13945"
     CDS             2618..4117
                     /locus_tag="VLM90_13945"
                     /inference="COORDINATES: protein motif:HMM:TIGR02037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HSQ14125.1"
                     /translation="MEPESKRGGSISFKGAILVALVSLVIGLGISGSLDWLSPGRAVN
                     FLGDAGSPESRLSGGLPDFVSLAKMMKPLVVNISTTQVSEGRGGGQEFGSPFGGEDDQ
                     FNDFWKRFFGGPQPRGPQRQRSLGSGFIIDGDGSILTNNHVVENASKIVVKLSDDQEY
                     EAKVIGRDAKTDIAVIKINAKSSLPAANFGDSDMLEVGEWVVAIGNPFGLDSTVTSGI
                     VSAKGRHIGQGPYDNFIQTDASINPGNSGGPLINLRGEIVGINTAIFSRTGGNMGIGF
                     AIPINLVKELLPQLRGKGKVTRGFLGVLIQKVTPEIAESLALEKAQGALVANVSKDGP
                     ADKAGVKVGDVIIEFDGKEVKDSGDLPIIVARTQVDKKVRMKVVRDKKEMVLGVAVGE
                     LKDEEVVAAAPEKGELGLTVQRLTPQMAESLGLEKSEGVVVSAVEPGSAADDAGIRRG
                     DVLMEIDRRPVRTLDEYRKMVAEIKKGRGVLFLVRRGESTLFLALKPQR"
     gene            4234..6513
                     /locus_tag="VLM90_13950"
     CDS             4234..6513
                     /locus_tag="VLM90_13950"
                     /inference="COORDINATES: protein motif:HMM:TIGR02074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HSQ14126.1"
                     /translation="MKKFKLRIFSIGLIVLLVITTTGLVAGAWFLKDWEEKVTKKFEG
                     RKWDFASKIYSDSYHLYVGFNLPLRDFTDKLRRLGYYETAVTPRTQGAYRVNSADGSV
                     ELFLHDFEFPTEKVKGYPVRLWFQGNVLTRIEKLSDNTEKFDLELEPEVVTGLYQRIW
                     QERRVVKLTEVPPLLIKSILAIEDERFFSHMGVDPVGILRAMLVNVRYLSLQQGGSTL
                     TQQLMKNFLLSDERTLSRKFPEAVMALIAERKYSKETILENYLNEIYLGQRGSQGVFG
                     VWEAAQFYYSKPLAELSVGETALLAGLIRAPNRLSPYRNAEAATKRRNVVLAKLLDDN
                     VITKKQYDAAHKEKLPQRALVKVTNEAPFYVDYLRRELDQNYPKDVLEKDGLRIFTGL
                     DLRLQKIAEKALSEGLTKLESSHPALKKKSAEEGLEGAIVVIRPQTGEIKAMVGGRNY
                     QKSQFNRVFQAKRQAGSVFKPFVFLAAFMHGGQSGMQYFSDTVVNDSQFTWSYDSGKS
                     WQPNNYNNDYYGAVTVRRALESSLNSATALVAQDVGIRRVRDVARRLGIESSLPAVPS
                     LSLGSAEVTPLEVAVAFSTLANGGVRARSVAVKHVMDQNTKALEKRDVKLEQVISPSL
                     AYTMNQLLMGVMDRGTGAQARRWGFTRPAAGKTGTTNDYKDAWFVGYTPELLAVVWVG
                     YDGPAKIGLSGAEAALPIWTEFMKAATASMPVTDFVPPPSSRSETPETPTEKCGPLTR
                     EGEPPGEPCPTPAKPAEPA"
     gene            6538..7293
                     /locus_tag="VLM90_13955"
     CDS             6538..7293
                     /locus_tag="VLM90_13955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14127.1"
                     /translation="MQLLKYCMLALVIALAASCAPQRTYRVPIPPSGAPPSSARVPPA
                     PPAPVAPPAPPMEPVRKPVPQEGKIREQDIRAKSPTPAPASKDVKDPRSSGEATSAPT
                     APPLADDSSLLAKITPGVSPQRAASLRVTDEGRKLLDAGEPAKAMSRLERTIVIDSTN
                     GYGYFYLAKAQYRLGHYQESLNLLEVAQSRLSGELFWLAEVHALRGENYRALGQAPRA
                     EASYHQSLRLNSGNRTASDGLARMTGETPAAAK"
     gene            7306..8304
                     /gene="tsaD"
                     /locus_tag="VLM90_13960"
     CDS             7306..8304
                     /gene="tsaD"
                     /locus_tag="VLM90_13960"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: protein motif:HMM:TIGR03723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HSQ14128.1"
                     /translation="MLVLGVETSCDDTAAALLQDGKTILANIVSSQDGVHGPYGGVVP
                     ELASRQHMLNILPIVDGALKNAGATLADVDGFAVTYGPGLVGSLLVGMSLVKGMSFRS
                     GIPFVGVNHLEAHLLAIHLEHDVAFPYIALLASGGHTLLYYVRAVGSYTHLGGTRDDA
                     AGEAFDKVAKMMGLGYPGGRIIDNLAKTGNPKAVRFPRARLKNCPYGFSFSGIKTAAW
                     HYLKEQGAAQWQPRQADIAASFQEAVVDMLVNPTIRAATANGAARIVLSGGVAANSRL
                     RAKMTEIATSEGMQVFCPAPKFCTDNGAMIALAGYHWLQRGRRDAYDLNADADLTL"
     gene            8340..9203
                     /gene="rsmA"
                     /locus_tag="VLM90_13965"
     CDS             8340..9203
                     /gene="rsmA"
                     /locus_tag="VLM90_13965"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: protein motif:HMM:TIGR00755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HSQ14129.1"
                     /translation="MPTLYEEVRAMLRDSEFRPRKSRGQNFLIHEHVVEAILRLLDLQ
                     PDDEVVEVGPGLGFLTRRLVERAQAVWAVEIDELLAQRLRAGELGTSSRFHLIYGDIL
                     NVALPDILPNVKMKLAGNLPYNIATEVLFRIFDWHEHVSSLVLMVQKEVADRIASAPG
                     SKSYGTLSVWCQVHGRVSEKINVSPEAFYPRPNVRSTILKIELLPEPRVTDENLPVLK
                     GLVRAAFGQRRKTLSNAVGAWLARERNAVDGLLAAHGVDPRRRGESLSVHEFIKLAEA
                     LRVSGLLPASK"
BASE COUNT         2034 a         2488 c         2842 g         1975 t
ORIGIN      
        1 cagcgggagt cggcggccag atagcaaata gcggcgtttg agcttggcag agacaactac
       61 cgtgcgcagg aatcgacgaa aggaattagc atgatctcga ataacttgat tcgattagtc
      121 gccgtggtcg ggtttttctt attgttggcg gtcgccaagc cattcgtaat cgtgcgcgct
      181 ggcacggtcg gagtggttta cagctttggt tccatcgtcg gccaagtgga cgagggcttt
      241 cacctcatct ggccgtggtg gttcatcacc cacacggata tcaaagtgca gcgagcggtg
      301 ttggataaat tgccgtcctt tagcgcggag actcaagatg tcttcgtcag agccagcctg
      361 aactatcagg tgtccccgaa ggcggttcag actttgttcc gcaccgttgg gccggattat
      421 tttcatgtgc tgatcgagcc gcgcgtagcg caaaatttca aggacgaaac ggttaagtat
      481 aagagcgtcg acatcgcgcc aaaccgggaa aagatccggc aggcggtgcg gcaacgactc
      541 gaggccgaac tttcaccgta ctcgatccat attatcgact tgctgctcga taacgtcgat
      601 tttagcgccg ccttcaaaca atccattgag aacaaacaaa tcgccacgca gaaggcgctt
      661 gagcaagagc agttggtctc tgcggctaag ttttccgcgc aacaacgcgt cgagaccgaa
      721 aagggcgaag gcgaggcaaa gctagcacgg gctgagaagg aagcgctggc caaccagaga
      781 ttgtcggcgt cgctgacgcc gttgctcgtc cagcacgaga tgatcgacaa gttgtctgag
      841 aaaatccaaa tcatggttgt gccgcaagga tcgaactttc ttatgcagtt gccgaatgtc
      901 gcggcactga aatgaataat ttgaggagaa gcgatggatt taggtctgcg cggtaaagtt
      961 gccatggtca ccggttcgag cgacgggatt ggctttgcca ccgctcgact gttcgcccgc
     1021 gagggcgcgc gcgtcgtatt gtgtgccagg cgagaagcgc tgctcaatca ggcgcgcgat
     1081 gtcatcattg aggagactcg cgcggacgtg ttggcattga cctgcgatgt gcagcgattg
     1141 aaagacgtca aacgcttggt tgacacgacg atagagcgct tcggcgccat cgatatttta
     1201 gtgaacaatg ccggcagcgt gccggcgatc aagttcagcg atgtcaacga cgcccagtgg
     1261 tatgaaatgt tggagagaaa gctactgggt tatctgcgca tgacgcgcga ggcggttccg
     1321 cacatgcaga aagccggctg ggggcgcatc gtcaacgtcg ccggcacggc cgggtgggag
     1381 ccgagccata cggcgatggc agtgggtatt aacaatgccg cggtgatgaa ctggacaaaa
     1441 tccatgtcgc tgcaatatgg cgctgagggg attttggtga cgacagtggc gccgggatcc
     1501 atcgacacgc cgaggcaagt gaacaatcgt cagcgcgaag cggaagtaac cgggataagc
     1561 gtcgaggagc tgcgcgcggt gcgggtcaaa gacattccac tccgtcgcct aggccgccct
     1621 gaggaagtgg ccaatttagt ggtgtttctc gcgtcggaat gttcgagtta catgaccggc
     1681 acttgtgtga ccgtggatgg cggcgtggtg agggggattt gactgcgggt cccatcgaca
     1741 ccgggcgaat tggcaggcga acatgagaga ccaagcgatc atctttcaga ccggcgaagg
     1801 cgatttcatg atatgcatgt cggaatcgat gctcttaaag ccggtgttta tgattcaact
     1861 tcgcgccgat cgtgttcaag actggcttgg gatgacattg ggactaaagc tgtcgataat
     1921 gctctgtcaa taatccaacc gcgaatcttg gacggccaga ccgtaacttg acaaggctag
     1981 gggtgggtat tacagtttaa accgagtttt acttctaaat cgtaactgtt ttacaagcca
     2041 gtttgatgat cgattttacc gtgccaaaac ttaaatagcc cgagtatttc agcagttcgc
     2101 ctggaaatcc gcgtttatat atacgcgggg ttggtttcca ggcttttttc tctaagggtc
     2161 gggggagtag agaaatggct ccagaagaag aaaagcaaga aagcaaagga ttcacggtac
     2221 aggatcgccg gcgcttctcg ccggagaccg gcgaagcgcg agaggacacg gcagaagcgc
     2281 aggaggcggc gaatcaagca tcgcagcaga gcactgccgc acaggagcgt gtggatggtg
     2341 ccgctcaggc caatgctcta cctgaaatcg atttttctac ctttgtcatt agcttgagca
     2401 ctcaggtgtt gatgcacttg ggcgaaatcg ccaacccggc cagcggcaaa gttgaagccg
     2461 acattagcgt ggccaagcag gtgatcgata tcttggccat gttgtctgat aaaacccgcg
     2521 gcaacttgaa cgctaacgag gcacagttga tggaaggtat tctttttgat ttgcgcatga
     2581 agtatgtcga agcggtgaaa aatcgatagg agtggggatg gaaccggaaa gtaagcgggg
     2641 cggcagcatt agtttcaagg gcgcgatttt agtcgccctg gtttcgctgg tgataggact
     2701 cggcataagc ggcagcctcg actggttgtc gcccggccgt gcggttaatt ttttaggcga
     2761 cgcgggttct cctgagtcgc gcctatcggg tggcctgccg gacttcgtct cgctcgcgaa
     2821 aatgatgaag cccctggtgg tcaatatttc cacgacgcaa gtcagcgaag gccgcggtgg
     2881 cggccaggag tttggtagcc catttggcgg agaagacgat cagttcaacg atttctggaa
     2941 acgttttttc ggcgggccgc agccgcgcgg gccgcagcgc caacgcagcc tcggctcggg
     3001 attcatcatc gatggcgacg gttcgatatt gaccaacaat catgtggtcg agaatgcttc
     3061 aaagatcgtc gtgaaacttt ccgacgatca agaatacgaa gccaaagtca tcgggagaga
     3121 cgccaagacc gacatcgccg tgatcaagat caacgccaag tcgtcattgc cggcggcgaa
     3181 ttttggcgat tccgatatgc tcgaagtcgg cgagtgggtg gttgccatcg gcaacccatt
     3241 cggcttggac agcacggtga cgtcaggcat cgtcagcgcc aaaggccggc atatcggcca
     3301 ggggccttac gacaatttta ttcagaccga tgcttcgatc aatccgggaa actcaggcgg
     3361 acccttgatc aacttgcgcg gcgagattgt cggtatcaat accgcgattt tcagccgcac
     3421 cggcggcaac atgggcatcg gcttcgccat cccgatcaat ttggtcaaag agctactgcc
     3481 gcaactgcgt gggaaaggca aagtcacccg cggcttcttg ggcgtgttga tccaaaaggt
     3541 cactccggag atcgccgaaa gtcttgcctt ggagaaagct cagggcgcgt tggtcgccaa
     3601 tgtctcgaag gatgggccgg ccgataaggc cggcgtcaaa gtcggtgatg tcatcatcga
     3661 gttcgacggc aaggaagtga aggactcggg cgatttgccg atcatcgtcg cgcgcacaca
     3721 ggtagacaaa aaagtgcgca tgaaagtggt acgcgacaaa aaggaaatgg tgcttggcgt
     3781 cgccgtcggc gaactcaagg atgaagaagt ggtcgccgcg gcgccggaga agggtgagct
     3841 cggcctcacc gtgcagcggt tgacgccgca aatggcggaa agcttaggtt tggaaaaatc
     3901 cgaaggcgtg gtggtttcgg cggtggagcc gggtagtgcc gccgatgacg ccgggattcg
     3961 gcgtggcgat gtgcttatgg aaatcgaccg ccggccggtc cgcactctcg atgaatatcg
     4021 taaaatggtc gccgagatca aaaagggccg aggggtgttg ttcctggtgc ggcgcggcga
     4081 aagcaccttg ttcttggcct tgaaaccgca gcgctgagca aaattgtcag cgttggataa
     4141 ctttccgagg gcgcggcttg tcgccggccg tcattttatt gcttttgcca atcgtctgcg
     4201 ccaagattca agggtgaatt gggagcattg gatttgaaga agtttaagct tcgaatcttc
     4261 agcatcggcc tcatcgttct tttggtcatc accacaacgg gtctagtcgc tggcgcgtgg
     4321 tttctcaagg actgggaaga gaaagtcacc aaaaaattcg aagggcgtaa atgggatttc
     4381 gcctcgaaaa tctattccga tagttaccat ctttacgtcg gcttcaattt gccgctgcgc
     4441 gatttcaccg acaagttgcg ccgtttgggt tactatgaaa ccgcggttac gcccaggacc
     4501 caaggcgcct accgggttaa ctctgccgac ggttccgtcg agcttttcct ccatgatttc
     4561 gaattcccga cagaaaaggt caaaggttat cccgtccgtc tgtggtttca gggcaacgtt
     4621 ttaacccgca tcgagaagct ctctgataac accgagaagt tcgatctcga actcgaaccg
     4681 gaagtggtta ccggcttgta tcagcggatt tggcaagaac gccgggttgt caagttgact
     4741 gaagtcccac cgctgctgat caaatcgatc ctcgccatag aagacgaacg gttttttagc
     4801 catatgggcg tcgatcccgt cggcatcctg cgcgcgatgt tggtcaatgt gcgctatttg
     4861 agcctgcaac agggcggcag caccttgacc caacagctga tgaaaaattt tctgctcagc
     4921 gacgagcgta ccttgagccg taagttcccc gaagcggtga tggcgctcat cgccgagcgc
     4981 aagtactcca aagaaaccat tttggagaat tacttaaacg agatctactt gggccagcgc
     5041 ggctcacagg gggtcttcgg ggtctgggaa gcggcgcaat tttattattc caagccgctg
     5101 gcggaacttt ccgtgggcga aaccgccttg ctcgccggtc tgattcgcgc gcccaatcgt
     5161 ttgtccccct atcgtaacgc cgaggccgcg accaagcggc gcaatgtggt tttggctaaa
     5221 ttgctcgacg ataatgtcat caccaagaaa cagtacgacg cggcgcataa agagaaattg
     5281 ccgcagcgag ctttagtgaa ggtgactaac gaagcgccgt tctacgtcga ttatctgcgc
     5341 cgggaactcg accagaatta tccgaaagac gtcttggaaa aggatggact gcggattttc
     5401 accgggctcg atttgcgcct gcagaagatc gccgagaagg ctttaagcga aggtttgacc
     5461 aagctggaat cgtcccatcc ggcgctgaag aagaaaagcg ccgaagaagg tttggaaggc
     5521 gcgatcgtcg tgattcggcc gcagacgggc gaaatcaaag cgatggtcgg cgggcgcaac
     5581 tatcagaaat cgcagttcaa ccgagtcttt caagccaagc gtcaggccgg ctcggtgttc
     5641 aaaccgttcg tttttctcgc cgcgtttatg cacggcgggc aaagcggcat gcagtacttt
     5701 tccgatacgg tggtgaatga cagccagttt acctggtcct atgatagcgg gaagtcgtgg
     5761 cagccgaata attataataa cgactattat ggcgccgtca cggtgcgccg ggcattggag
     5821 agttcgctca attccgccac tgcactggtc gctcaagatg tcggtatccg gcgcgtgcgc
     5881 gatgtcgcgc ggcgtttggg catcgagagt tcattgccgg cagtgccctc gctttccctc
     5941 ggttcggccg aagtgacgcc cctcgaagtc gccgtggcgt tttcgacttt agccaacggt
     6001 ggcgtgcggg cgcgctccgt ggcggtgaaa catgtcatgg atcagaacac caaagctttg
     6061 gaaaagcgcg acgtcaaatt ggaacaggta attagcccga gtttggccta tacgatgaat
     6121 caacttctaa tgggtgtgat ggaccgcggt accggcgcac aggcgcgccg ctggggattc
     6181 acccggccgg cggcgggtaa aacaggtaca accaatgact acaaagatgc ctggttcgtc
     6241 ggctacacgc cggagctgct cgcggtggtc tgggtcggtt acgatggtcc ggcgaagatc
     6301 ggtctctctg gcgccgaggc ggcgctgccg atttggacgg aattcatgaa ggccgccacc
     6361 gccagtatgc cggtgaccga tttcgtgcca ccgccatcgt cgcggagcga gacccctgag
     6421 acgcccacgg aaaaatgcgg cccgttgacc cgcgaaggcg agccgccggg cgagccctgt
     6481 cccacgccag caaagcccgc ggagccggca taagacctat tgccgccgaa aactttcatg
     6541 cagctgctta aatattgcat gcttgccctg gtgattgcct tggcggcgag ctgcgcgccg
     6601 cagcgaactt atcgtgtgcc gataccgcca agtggcgctc cgccatcgag tgcgcgggtt
     6661 ccgccagcgc cgccggctcc ggtcgcgccg ccggcgccgc ccatggaacc cgtgcgcaaa
     6721 ccggtgccac aggagggaaa aatccgcgag caagatattc gcgctaaatc ccctacgccg
     6781 gcgccggcat ctaaggacgt gaaggatccc cgcagtagcg gcgaagctac gtccgcgcca
     6841 accgcgccgc cgctcgccga cgatagttct ttgctggcga aaatcacccc aggggtatcg
     6901 ccgcaacggg ccgcctcttt gcgggtcacc gatgaggggc gcaaactact cgacgccggg
     6961 gagccagcga aggcgatgag ccgtttggag cggaccatcg tgatcgattc gaccaacggt
     7021 tacggctact tttatttagc caaggcgcag tatcgcctgg gccattatca ggaatcgctt
     7081 aacctcctcg aagtggccca gtcgcgtctc agtggcgagc tgttttggct cgccgaagtc
     7141 cacgccctgc gcggtgagaa ttatcgcgcc ctcggccaag cgccgagagc ggaagcgagc
     7201 taccatcagt ctttgcgact taattccggt aatcgaaccg ccagcgatgg gctcgcccgc
     7261 atgaccggcg agactccggc tgctgcgaag tagggacaat catttatgtt ggttctaggg
     7321 gtggaaactt cttgcgacga caccgccgcc gcgctcttgc aggatggtaa gacgatcctc
     7381 gccaatattg tctcgtcgca ggatggcgtc catgggccct atggcggcgt ggtgccggaa
     7441 ctggcttcgc gccagcatat gctaaatatc ttgccgatcg tcgacggcgc cttgaaaaac
     7501 gccggcgcga ccttggccga tgtcgatggc ttcgcggtga cctacggccc tgggctggtg
     7561 ggatctttgc tggtcggcat gtcgctggtc aagggcatgt cgtttcgcag cggaattccg
     7621 ttcgtcggcg tcaatcatct cgaagcccac ctgctggcga tccacttaga acatgacgtg
     7681 gcattccctt acatcgcgct gctcgcctcc ggcggccaca cgctgctgta ctatgttaga
     7741 gctgtcggca gctatactca tctaggcggc acccgcgacg acgccgccgg cgaggccttc
     7801 gacaaggtgg cgaaaatgat ggggctgggt tatcccggtg gccggatcat cgacaacttg
     7861 gcaaagacag gcaatcccaa ggcggtgcga tttccgcggg cgcgactcaa gaactgcccc
     7921 tatgggttta gtttcagcgg catcaaaacc gcggcgtggc attatctcaa agagcagggg
     7981 gcggcgcagt ggcaaccgcg ccaggccgat atcgctgcca gtttccagga ggcggttgtc
     8041 gatatgttgg tcaatccgac gatcagagcg gcgaccgcca acggcgcggc gcgcatcgtt
     8101 ttgtcaggcg gggttgccgc caatagccgg ctgcgcgcca agatgaccga aatagccact
     8161 agcgaaggca tgcaagtctt ctgtcccgcg ccgaagtttt gcaccgacaa cggcgcgatg
     8221 atcgcgctcg ccggctatca ctggcttcag cgtggccggc gcgacgccta cgacttaaac
     8281 gccgacgccg atctgacgtt gtaatacctc ccagcaataa gttctgaaag ttgccgagga
     8341 tgccgaccct ctatgaagaa gtgcgcgcca tgctgcgcga ttccgagttt cgtccgcgca
     8401 agagccgcgg gcagaatttt ttgattcatg aacatgtcgt cgaagcgatc ctgcgcttgc
     8461 tcgatttgca gccggatgac gaagtcgtcg aggtcggccc ggggttggga ttcctcacgc
     8521 ggcgcctggt cgagcgcgcg caagccgtgt gggcggtgga gatcgacgag ctcttggcgc
     8581 aacgcttgcg cgccggcgag ctcggcacaa gctccaggtt tcatctgatt tatggcgata
     8641 ttctcaatgt ggcattgccg gacattttgc cgaatgtaaa aatgaaactc gccggcaatc
     8701 tgccttacaa catagccacc gaggtgctgt ttcggatctt cgattggcat gagcatgtca
     8761 gttccctcgt gttaatggtg caaaaggaag tcgccgaccg catcgccagc gcgccaggtt
     8821 cgaagtccta cggcacgctg tcggtgtggt gccaggtgca tggccgtgtc agcgagaaaa
     8881 taaacgtctc gccggaggcc ttttatccac gtcccaatgt gcgctcgacg atactaaaaa
     8941 tcgagctgtt gcccgagccg cgagtgaccg atgagaatct cccggtgctc aaaggtttgg
     9001 tgcgcgccgc cttcggccaa cgccgcaaga ccctgagcaa cgccgtcggc gcttggctag
     9061 cgcgcgaacg caatgcagtc gacggcctcc tggcggccca cggcgtcgat cccagacggc
     9121 gcggtgaaag cctcagcgtc catgaattta tcaaactggc tgaagcgctt cgcgtcagcg
     9181 gattgctgcc ggctagtaag tgaaggtcta ccggttgttg tatgcttgat agtttccgtc
     9241 actttgtctt attcaccgcg aaggcacgac cgacaggaag ggttcgggtg attagcgttc
     9301 cgaacttcgt gatcttcgtg tccttcgtgg tgaaaattc
//
LOCUS       DATIRS010001098         1723 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1558432, whole genome shotgun sequence.
ACCESSION   DATIRS010001098 DATIRS010000000
VERSION     DATIRS010001098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1723
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1558432"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..254)
                     /locus_tag="VLM90_13970"
     CDS             complement(<1..254)
                     /locus_tag="VLM90_13970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14130.1"
                     /translation="MRRIKFFIIDGLGEASKRSKRSIMAIDHGNRSWQSIVAGADRAL
                     CWTFYLWRATYEATIISRSTNEAIDDFCSSRNVNPDCGQF"
     gene            303..1457
                     /locus_tag="VLM90_13975"
     CDS             303..1457
                     /locus_tag="VLM90_13975"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HSQ14131.1"
                     /translation="MRQRSDYPTFSDDELKRRHQAFYGLMEQEGVDAVLIYGSGRYSS
                     DIYWLSDWPSSREAYLLMQAGQAPVILMQLFNHYPMARVMSWIEDLRWAGANTTNSVV
                     ELFAERGLAAKKIGLVGPISYQVYNRLREQYPNASFVDLGGKLRMMRTIKSSAEIERI
                     HFASKLTDQSIQALAEGLREGMREDEIPALIEPAYLKAGGYAGIHFISSMPMRSPDFC
                     VPSQFHSNRKLARGDALITEISGAYSGYSGQIHRTFSIGEGPTPEWQKMHDAAMEVFN
                     VLSKVIKDGATTTEAEEAAEIIHRRGYSTYDDLVHGVNQYPPIFQTKTRKRHDSREIT
                     FRENMVIVIQPNLMTYDEKMGLQFGETLVVKKNGCESLNAYPRQWVTCKG"
     gene            complement(1540..>1723)
                     /locus_tag="VLM90_13980"
     CDS             complement(1540..>1723)
                     /locus_tag="VLM90_13980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14132.1"
                     /translation="VILALSVGHVVVVSPIVATSPLWIVLGTWLYLRGIESLTLKTII
                     GAVCVVSGTVVISLVR"
BASE COUNT          427 a          510 c          452 g          334 t
ORIGIN      
        1 aagaactgcc cgcaatcagg attgacattg cgagagctgc aaaaatcgtc gatggcttca
       61 tttgtactcc ttgaaataat cgttgcttca tacgtcgcac gccataaata aaatgtccag
      121 cacaatgccc tgtcggcgcc ggcgacgatc gattgccatg atcgattgcc atgatcgatt
      181 gccatgatcg atcgctttga tcgcttgctt gcttcgccga gtccatcgat gataaaaaat
      241 ttgatgcggc gcacagaagg cgaatcgcac cgcaccagat aatttgaatt ggagaccatc
      301 ccatgcgcca acgatccgac tacccgactt tttccgacga cgaactcaag cggcgccatc
      361 aggctttcta cggtttgatg gagcaggaag gcgtcgacgc cgtgctgatc tacggcagcg
      421 gccgttactc atcggatatc tattggctga gcgactggcc gagcagccgg gaagcctacc
      481 tgctgatgca agccggtcaa gcgccggtga tcttgatgca attattcaat cactacccga
      541 tggcgcgggt gatgtcgtgg atcgaagacc tgcgctgggc cggcgccaac acgaccaata
      601 gcgtcgtcga gctcttcgcc gaacgcggtt tagcggcgaa aaagattggc ctggtcgggc
      661 cgatttccta tcaagtttat aaccggctgc gcgagcagta tcccaacgcc agcttcgtcg
      721 atctcggcgg caagctgcgc atgatgcgga cgatcaaaag ctctgccgag atcgaacgca
      781 tccacttcgc ctccaagttg acggatcaat cgatccaagc gctcgccgaa gggctccgag
      841 aaggtatgcg cgaagacgag ataccggcgc tcatcgaacc tgcctatctc aaggcgggcg
      901 gctacgccgg cattcacttc atcagcagca tgcccatgcg cagccccgac ttctgcgtgc
      961 cgtcgcaatt ccattctaat cggaaattgg cgcgaggtga cgcgctgatc accgagatca
     1021 gcggcgccta ctccggctac agcggccaga tccaccgaac tttttccatc ggcgaagggc
     1081 cgacgccgga gtggcagaaa atgcacgacg ccgccatgga agttttcaat gtattgtcca
     1141 aggtgattaa agacggcgcg acgactaccg aagccgaaga agccgccgaa atcatccacc
     1201 ggcgcggcta cagcacctat gacgacctgg tgcacggcgt caaccaatat ccgccgatct
     1261 tccaaaccaa gacgcgcaaa cgccacgact cccgagaaat caccttccgc gaaaacatgg
     1321 tcatcgtcat ccagcccaac ctgatgacct atgacgaaaa aatgggcctg caattcggcg
     1381 agaccctggt cgtcaagaaa aacggctgcg aaagtttgaa tgcgtacccg agacaatggg
     1441 tgacgtgcaa gggctaattc tccgctccac cactccttta tttccaacta ccgaccgtat
     1501 gaagtgttgg agcgatggag tattgaacta atggatagat caccgcacca gcgagatcac
     1561 cacagttccg ctgacaacgc agaccgcgcc gatgatggtt ttcagcgtca ggctttcaat
     1621 gccgcgcaga tacaaccaag tgccgagcac gatccatagc ggactcgtgg caacgatcgg
     1681 cgataccacg acgacgtgac cgacgctcag cgccagaatc acc
//
LOCUS       DATIRS010001099         2927 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_673098, whole genome shotgun sequence.
ACCESSION   DATIRS010001099 DATIRS010000000
VERSION     DATIRS010001099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2927)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2927)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2927
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_673098"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..816
                     /locus_tag="VLM90_13985"
     CDS             <1..816
                     /locus_tag="VLM90_13985"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSQ14133.1"
                     /translation="TLLDLERQSWVSDNMWLLPVHVPIAADTAVALPPLLEQVRERLA
                     ADPNSAKQVADRRAKVEAIYRETRKKSEEWIKKTWDEKPISQARFFSEINKRVQGKAW
                     ALVSAHGRRWREVIEVSEPAHGMGGGRGGGVGYGLPSSIGSALGFKGSGRLCVSILGD
                     GDFLMTSNALWTAAKYQIPLLVIVLNNHSYYNDEEHQERMARARKRPVENKGIGIRIE
                     DPVPDLVTIARAFNVDAFGPVTEPGELGPILDKAIELVDSGKPVVVDVFTQPR"
     gene            1052..1240
                     /locus_tag="VLM90_13990"
     CDS             1052..1240
                     /locus_tag="VLM90_13990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14134.1"
                     /translation="MDKLIEANLKAVLQREGLEPKAGDLEQFSEIIELYMGNLKQLHS
                     VNLGSEELAPVFRPEWKR"
     gene            1340..2725
                     /locus_tag="VLM90_13995"
     CDS             1340..2725
                     /locus_tag="VLM90_13995"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HSQ14135.1"
                     /translation="MAVAEKPLYYLTIHEAQQLIRERKLSPVELTKSVLDRIAAVDDR
                     LHAYINLMADGAMAAARAAEAEIAKGNWRGPMHGIPFAVKDQLDVEGAPARVRQFTQG
                     VGDATPVRKLREAGAVLLGKLHMSSMPGPELPLPRNPWNTDHITGGSSTGSGAAVAGG
                     LCLGSLGEDTAGSIRNPSAFCGIAGLKATYGRVSRHGLAPLSWSLDHCGPMARAVEDL
                     AHMLNALAGYDGNDPTSSAQPVVDYTSALSGDVKGIVIGVPRDYIDECAPRTDPIVLR
                     RVDEAIAQLKALGARIEEVKVPTLHLATIANAVIYYNEFWAANRGAAASVLATGAAQR
                     RARIYLGLLTNSSDYIQAQRIRSRCRAELAQVFEKIDCLALPNQNGPAPRVEDVGPID
                     TLFKHVVPEFHGPFNLTGLPTLSVPCGYSENNLPIALQIVGRPFDEVTVLRAGYTYQQ
                     QMKWYEKRPAI"
BASE COUNT          643 a          818 c          944 g          522 t
ORIGIN      
        1 accttgctcg atctcgaacg gcagagctgg gtgagcgaca acatgtggct gttgccggtg
       61 catgtgccga tcgcggcgga tacggcggtg gcgctgccgc cattgctcga acaggtgcgc
      121 gagcgcctgg ccgccgatcc caactccgcc aaacaagtgg cggatcggcg cgccaaggtc
      181 gaagcgatct atcgcgagac ccgcaagaag agcgaagaat ggattaaaaa aacttgggat
      241 gaaaagccga tctcgcaagc gcgctttttc agcgagatca acaaacgcgt gcaaggaaaa
      301 gcctgggcgc tggtttcggc ccatggccgg cgctggcgcg aagtcatcga ggtcagcgag
      361 ccggcccatg gcatgggcgg cggtcgcggc ggcggcgtcg gttacggtct gccgtcgtcg
      421 atcggttcgg cgcttggatt caaaggcagc ggccggttgt gcgtgagcat attgggcgac
      481 ggcgattttc tcatgacctc caacgcgttg tggaccgcgg cgaagtatca aatcccgctg
      541 ctggtgatcg tgctcaacaa tcactcgtac tacaacgacg aagagcatca agagcgcatg
      601 gcgcgggcgc gcaaacggcc ggtggaaaac aaaggcattg gcatccgcat cgaagatccg
      661 gtgccggacc tggtgaccat cgccagagct ttcaacgtcg acgccttcgg tccggtcact
      721 gagccgggcg agctgggccc gatcctcgac aaggcgattg agctcgtcga tagcggcaag
      781 cccgtggtcg tcgatgtgtt cacgcagccg cggtaatccg agcgcagcgg aacggcaagc
      841 aaggagaaga ctcggaatcg gcaggagagc cgcaaagcat gtcctgagcg aatgcgaagg
      901 aactgagccg cgcaaagggc gcaaaaaaat ctttgcggaa atcagggtgt aggggcgaat
      961 cacgattcgc cctggggtgg aacggcggtc gtctggaaac aaatttgtcc agaggacgca
     1021 gacgcaggcc agcatttaac aggagtcgaa gatggataaa ctgatcgaag cgaatttgaa
     1081 agcggtgctt caacgcgaag gcttggagcc aaaggccggt gatctcgagc agttcagcga
     1141 gatcatcgag ctgtatatgg gtaatctgaa gcagctgcac tcggtgaatc tcggttccga
     1201 ggagttggct ccggtgtttc gacctgagtg gaagagataa ataaattgat aatggagaat
     1261 ggaaaattga caatcgccag atcgcacgtt gagttgtggt caaagtacag ctcagtgcgt
     1321 agcgttgaag gagcgtacca tggctgtcgc tgaaaaaccg ctttactatt taaccattca
     1381 tgaagcccaa caactgattc gcgagcgcaa gctctcgccg gtggagctga ccaagtcggt
     1441 gctcgaccgc attgccgcgg tcgatgacag gctgcacgcc tacattaatt taatggccga
     1501 cggcgccatg gctgcggcgc gcgcggctga agcggagatc gccaaaggca actggcgcgg
     1561 gccgatgcac ggcattccat tcgccgtgaa agaccagctc gatgtcgagg gcgcgccggc
     1621 ccgggtgcgg caatttaccc aaggtgtcgg cgacgccacg ccggtgcgca agttgcgcga
     1681 ggccggcgct gtgctgttgg gcaagttgca catgagcagc atgccgggac ctgaactgcc
     1741 gctgccgcgc aatccgtgga ataccgatca tattaccggc gggtcgagca ccggctccgg
     1801 cgccgcggtg gccggcggct tgtgtctggg ctctctcggc gaagacaccg ccggctcgat
     1861 ccgcaacccg tcggcgttct gcggcatcgc cggactcaaa gcgacttatg gacgggtcag
     1921 ccggcatggc ctggcgccgc tcagctggtc gctcgatcac tgcgggccga tggcgcgcgc
     1981 ggtggaagat ctggcgcata tgctcaacgc cttagcgggc tacgatggca acgatccgac
     2041 atcgagcgcc cagccggtgg tggattatac cagcgctttg agcggcgacg tgaagggcat
     2101 tgtcatcggc gtgccgcgcg actatatcga tgaatgcgcg ccgcgcaccg atcccatcgt
     2161 cttgcgccgc gtcgacgaag cgatcgccca actcaaagcc ctcggcgcgc gcatcgaaga
     2221 agtcaaagtg ccgacgctgc atctcgccac catcgccaac gcggtgatct attacaatga
     2281 attctgggcg gccaaccgcg gcgcagcggc gtcggtgttg gcaaccggcg cggcgcagcg
     2341 gcgcgcgcgg atttatctcg gtctattgac caattcctcc gactacattc aggcacagcg
     2401 catacgcagc cgctgccgcg ccgagttggc gcaggtgttt gagaaaatcg attgcctcgc
     2461 cctgccgaac caaaacggcc cggcgccgcg ggtcgaggat gtcggaccga tcgacacgct
     2521 cttcaagcat gtggtgccgg aattccacgg gccgtttaac ctcaccggcc tgccgaccct
     2581 gtcggtgccc tgcggttact ccgaaaataa tttaccgatt gccctgcaaa tcgtcggccg
     2641 gccgtttgac gaagtcacgg tgctgcgcgc cggctacacc tatcagcagc agatgaaatg
     2701 gtatgagaag cggccggcga tttaggattg ggaagaatgg ccgcaaagaa cgcaaagaac
     2761 acaaaataaa atcgaagcgg aaatccggaa gtaggggcgt atggcatacg ccctgggagg
     2821 tggggtggcg atcgagcagc cacaaaattt gcgtggttga gacaattcct aatggatagc
     2881 actacacgct tttctccaga ctgcgttggg gaaaagaggt tcgcctg
//
LOCUS       DATIRS010001100         2462 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_967889, whole genome shotgun sequence.
ACCESSION   DATIRS010001100 DATIRS010000000
VERSION     DATIRS010001100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2462)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2462
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_967889"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..183)
                     /locus_tag="VLM90_14000"
     CDS             complement(<1..183)
                     /locus_tag="VLM90_14000"
                     /inference="COORDINATES: protein motif:HMM:NF012601.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14136.1"
                     /translation="MIEADHRYLRYALMVAERARDHGDSPFGAVLVSNRGRILIEAEN
                     RENVTHDCTSHAETRLL"
     gene            829..1416
                     /locus_tag="VLM90_14005"
     CDS             829..1416
                     /locus_tag="VLM90_14005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14137.1"
                     /translation="MQRRFFLCSLALLLIVTIPALSAEPERSKPPVPEELSDAWERFQ
                     RALHDWGGRLWERVGPRGAREDRPVISQMLNNKEALGLSADQVRRLEQQRDNFQRLTI
                     RNEADLRILELDIATLLDSEPVEMAKLEAKIREEEKLRSDLRIARIRAIEQGKALLNA
                     EQKKKLTELLRQSLTLRYPPTSQNPSATERGQPSR"
     gene            complement(1388..1801)
                     /locus_tag="VLM90_14010"
     CDS             complement(1388..1801)
                     /locus_tag="VLM90_14010"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HSQ14138.1"
                     /translation="MILYTQTDFLAEVKKLMEGKGAHVVYDSVGATTFEKSLDCLRPR
                     GYIVLFGQSSGPVAPFDPGKLAAKGSLFLTRPSLAHYMLDRNELLQRANDLFNWTASG
                     ELRLRIDSTLSLQDAAEAHRLLEGRKTTGKVVLVP"
     gene            complement(1798..2355)
                     /locus_tag="VLM90_14015"
     CDS             complement(1798..2355)
                     /locus_tag="VLM90_14015"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HSQ14139.1"
                     /translation="MKAIRIHNYGGPEVLSQDDIAVPEPKAGEARVKIAAIGLNYIDV
                     YQRTGLYPLPTPFTLGMGGAGIVDAIGGGVTELKAGDRVAYAMILGSYAEYAIVPAAK
                     LAPLPANVDFRSGAAIMLQGMTAHYLTHSTYPLKRGDTALIHAAAGGVGLLLIQIAKM
                     LGARVIGTVAPKLKLSLPSRPARMT"
BASE COUNT          489 a          734 c          710 g          529 t
ORIGIN      
        1 gagcaaacgg gtttcggcgt ggctggtgca atcatgggtg acgttctcgc ggttttccgc
       61 ttcgatcaag attctgccgc ggttgctgac caggacggca ccaaacgggc tgtcgccgtg
      121 gtcgcgggcg cgttcggcga ccatcaatgc gtagcgtaaa taacgatgat cggcttctat
      181 catatttttc tccccggcct gtgtgttaga actttccccc gcgcggtcgt cggatcagtg
      241 ccgatagggc cggcaaaaat gacaagggcg ccctttaata aggggcgccc ttgcggcgcg
      301 tttgggcgct cttgactgcg ctattcaata ttctatcgct cccgctatca acggcatgat
      361 gggcctcgac ccggatcgca ctcacgtgag tgacctccgc gtgtcgcact acctgggacc
      421 ttcctcaatt tgtcgccgaa gcgacgattt gcctacaggc aattcggttg aggtccggtt
      481 agtgaacgcc gctgcgtgag gcggtctagg gttgcgggtc gaaaaccgcc cgccgacagc
      541 gggcctgagt gcttcggtgg atttccgtct tgcatagcaa agactccttt cacaccttgg
      601 ggcttgactg tattatgcga ctcactcgcc cctacgcctg gcagcgttca gtgaatctgc
      661 ttccgcttta cgactgtgca atggcaatgt caagagcaaa aaaaatggcc ccgccaaata
      721 tttcctaggt cgtttatcag catcccgcgt ccaacgaagt tgacttcatt gcgtggcggc
      781 gctttacttt ttgccgggcc ctgctgaaat tggctcactg gaggcgttat gcaacgtagg
      841 ttttttttat gttcgcttgc cttgctgttg atcgtcacca tccccgcttt gagcgccgaa
      901 ccggaacggt cgaagccgcc ggtgccggaa gaactgtccg atgcctggga gcgctttcag
      961 cgcgcgttgc acgactgggg cgggcggctg tgggagcgcg tcgggccgcg cggcgcgcgc
     1021 gaagaccgcc cggtgatcag ccagatgctc aacaacaaag aggcgctggg attgtccgcg
     1081 gatcaagtgc gccggttgga gcagcagcgc gataatttcc agcgcttgac catccgcaat
     1141 gaggcggact tgcgcatcct ggagcttgat atcgccacct tgctcgacag cgagccagtg
     1201 gaaatggcca agcttgaagc gaaaatacgc gaggaagaaa agctccgcag cgacctgcgc
     1261 atcgcccgca tccgcgccat cgaacagggc aaggcgctgc tcaacgccga acaaaagaaa
     1321 aaattaaccg agctgctgcg ccaatcgctg acactgcgat atccgccgac aagtcaaaac
     1381 ccgtccgcta cggaacgagg acaaccttcc cggtagtttt tctgccttcc aatagcctgt
     1441 gcgcttcggc ggcgtcttgc agcgacaacg tgctgtcgat gcgcagcctc agctcgccac
     1501 tcgcggtcca attgaataga tcgttggcgc gctggagcaa ttcattgcga tcgagcatgt
     1561 agtgagccag gcttgggcgg gtaagaaaga gcgagccctt ggccgcgagc ttccccggat
     1621 cgaatggcgc caccggcccg ctcgactggc cgaacagcac gatataaccg cgcgggcgca
     1681 ggcaatccag gctcttctcg aacgtcgtcg cgccgacgga atcgtaaacg acatgcgcgc
     1741 ctttgccttc catgagcttt ttcacttcag ctagaaagtc tgtctgcgta taaagaatca
     1801 cgtcatccgc gccggcctgc ttggcaagct gagctttagc ttcggtgcca ccgtgccgat
     1861 gacccgcgcg ccgagcatct tagcgatctg aatcagcagc agcccaacgc cgccggcagc
     1921 ggcgtgaatc agcgcggtgt cgcctctttt tagtggatac gtgctgtggg tcagataatg
     1981 cgccgtcatg ccttgcagca tgatcgcggc gccggacctg aaatcgacgt tggccggcag
     2041 cggcgccagc ttcgccgccg gcacgatggc gtactccgcg taagaaccaa gaatcatcgc
     2101 gtaagcgacc cggtcgccgg cttttaactc agtcacgccg ccgccaatcg catcgacgat
     2161 gcccgcgcct cccatcccca acgtaaacgg cgtcggcaaa ggataaagcc ctgtgcgttg
     2221 gtagacgtcg atgtaattga gaccgatcgc cgcgatcttg acgcgcgcct cgccggcctt
     2281 gggttcggga actgcgatgt catcttggct caagacttcc gggccgccgt aattgtggat
     2341 acgaatcgct ttcatgtatc actctccatc cggtcgccga ttgattaccg cgtatccggt
     2401 tgttcaggta atttcaacta cgcgggttca tggcaatagc tcaacttgtt aacacgttaa
     2461 ca
//
LOCUS       DATIRS010001101         1612 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_378409, whole genome shotgun sequence.
ACCESSION   DATIRS010001101 DATIRS010000000
VERSION     DATIRS010001101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1612
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_378409"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            136..951
                     /locus_tag="VLM90_14020"
     CDS             136..951
                     /locus_tag="VLM90_14020"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: protein motif:HMM:NF014641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006780 - uroporphyrinogen III biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006782 - protoporphyrinogen IX
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HSQ14140.1"
                     /translation="MTNLAGAMSSEKPFAGRRIVVTRARKQAGGLAQRIEALGGEVIE
                     FPTIEIQAPASFAELDRALQQITAYQWIIFTSVNSIEPFLERLKIAKKSLADLANVQV
                     AAIGSETTRRLAAAGITVAVVPSRFQAEGLVESLNGVELTGKRVLIPCAAKARDVLPE
                     TLRQWGAKVDVVEAYRTSAPAFDSREVRQRLERGDVDMVTFTSSSTVSHFVQLCGGNS
                     LDSIVHGAAIASIGPITGKTIEELGGAVTVLARESTIDGLVDAMIEYFSAVNH"
     gene            966..>1612
                     /gene="hemB"
                     /locus_tag="VLM90_14025"
     CDS             966..>1612
                     /gene="hemB"
                     /locus_tag="VLM90_14025"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF006762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HSQ14141.1"
                     /translation="MDFPRYRPRRLRRNDKLRAMVRETSLAPANLIYPLFVGPGKDRV
                     QPVSSMPGVAQLSVNHAVRECEEALSLGIPAVILFGLPEHKDAVGSEAYDDNGIVQQA
                     IGEIKSQLPELLVITDVCLCEYTDHGHCGVIKNGDVDNDSTLELLAKESLSHARAGAD
                     IVAPSDMMDGRVGAIRKALDENGFAQTAIMAYAAKYASGFYGPFREAAESTPQFG"
BASE COUNT          335 a          431 c          514 g          332 t
ORIGIN      
        1 ccagtcccga tggcaaaaca ctgcgcaaag ccaagctcac gggcgatatc agcgaggccg
       61 agatgcttgg ggtacggctg gcggaggagc tgctcaagca gggagccgat aagatattgg
      121 cggcgggttg atcccatgac gaatttggct ggcgccatgt cgagcgaaaa gccgtttgcc
      181 gggcgacgta tcgtcgtcac tcgcgcgcgc aaacaagccg gtggtttggc tcaacgcatc
      241 gaagcgctgg gtggtgaggt gatcgagttc ccgaccatcg agattcaagc gccggcgagc
      301 tttgctgagt tagatagagc actgcaacag atcactgcct accagtggat tatttttacc
      361 agcgtcaata gcatcgagcc attccttgag cgcttgaaga tcgcaaagaa atcgctggcg
      421 gatttggcca acgtgcaggt ggcggcgatc ggttccgaga ccaccaggcg gctggccgcc
      481 gcaggaatta ccgtcgccgt ggtgccaagc cgttttcaag cggaggggct ggtggaatcc
      541 ttgaacggcg tggaactaac cggcaagcga gtcttgattc cctgtgccgc caaagcgcgc
      601 gatgtgttgc ctgaaacctt gcgtcagtgg ggcgccaagg tcgatgttgt tgaagcttac
      661 cgaaccagcg cgccggcgtt cgactcaaga gaagtacgcc aacggctgga gcgtggcgac
      721 gtcgacatgg tgacgtttac cagttcgagc acggtgagtc atttcgtgca gctgtgcggc
      781 ggcaactctc ttgattcgat tgtccacggg gcggcgatcg ccagcatcgg cccgattacc
      841 ggcaaaacga ttgaagagtt gggcggcgct gtgacggtcc tggcgcgcga atccaccatc
      901 gacggattgg tcgacgcaat gatcgagtat tttagcgccg tcaaccattg actcgggaga
      961 accccatgga ctttccaaga tatcggccgc gccggttgcg gcgcaacgac aaactgcggg
     1021 cgatggtgcg tgaaacttcg ttggcaccgg ccaatttgat ctatcccttg ttcgtcggcc
     1081 ccggcaagga cagggtacaa ccggtttcat cgatgccggg cgtggcacag ttgtcggtga
     1141 accatgcggt gcgcgagtgt gaagaggctc tttctctggg cattcccgcg gtgatcttat
     1201 tcggactgcc cgagcataag gacgcggtcg gcagcgaggc ttacgacgac aacggtatcg
     1261 ttcagcaggc gattggcgag attaaaagcc agctgcccga gcttctcgtc atcaccgatg
     1321 tttgtctctg cgaatacacc gatcatggcc attgcggcgt gattaagaac ggcgatgtcg
     1381 acaatgacag tactttggag ctactggcga aagagtcgtt gtcccatgcc cgcgccggcg
     1441 ccgatatcgt cgcgccgtcg gatatgatgg acggccgggt cggcgcaatc cgcaaagctt
     1501 tggacgaaaa tggctttgcg cagacggcga tcatggccta cgcggccaag tatgcttcgg
     1561 gtttctatgg gccatttcgt gaagctgctg aatcaacgcc gcagttcggt ga
//
LOCUS       DATIRS010001102         5500 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1460327, whole genome shotgun sequence.
ACCESSION   DATIRS010001102 DATIRS010000000
VERSION     DATIRS010001102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 5500)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5500)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5500
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1460327"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1005
                     /locus_tag="VLM90_14030"
     CDS             <1..1005
                     /locus_tag="VLM90_14030"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HSQ14142.1"
                     /translation="VDICPVGALTDRDFRFKVRVWYLDKTPSICPGCSTGCNISVEAY
                     QNKIARFKPRQNEAVNSHWICDEGRYCFHDLAGGERLTTPLIRQEGGLAPATWEAALQ
                     AVVNGLRGAQPLAGILSGRSTNEEAYLFAKLVRKLASDCSMEVFYQERQLTEVQKILM
                     SPDRSPNFRGARDMGVNSNGGFAGLMQALAGNNFSSAFIVGEDLLGANGDSAQIRSAL
                     EKLSFLVVQDTKLTESAKLAQVVLPAAHFGEKEGTYTNRQGRVQKLNAAVICPEGARQ
                     DSEIFLRLLDGAGQKLDYATPSDIFTALTREVIAYNGLTYDSIGDQGYALGSGGGAAS
                     "
     gene            1002..2132
                     /locus_tag="VLM90_14035"
     CDS             1002..2132
                     /locus_tag="VLM90_14035"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF012373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit H"
                     /protein_id="HSQ14143.1"
                     /translation="MIVDLAIITLKAVLVVGMVLNLAGVLGWIERKASALIQDRIGAN
                     RASIFGFAGMGLVNTLIADPLKFLFKEDFIPPKGDRFLHTLAPCMALFPALVTFAVIP
                     FGDVLNIGERSINLQVANLNIGILYVFAMGSLGVYGIVIGAWASNNKFSMLGGVRGSA
                     QMISYEIAMGLSVIGVLMVYGTLELQDIARGQGMLIRDLMPSWLSFLSPLVGWLPAWG
                     IFLQPLAFLLFFTAAVAETKRIPFDLPEGESELVAGYHVEYSGGKFLMFFAGEFAEVV
                     TVAGLVTTLFFGGWQVPYLLRDGFHFPWGGTWLLPHILIVLLQVTAFTVKVVFFCWLQ
                     ILLRWSVPRFRYDQVMRLGWKMLLPLALLNVVATAIWVLAAQ"
     gene            2145..2639
                     /locus_tag="VLM90_14040"
     CDS             2145..2639
                     /locus_tag="VLM90_14040"
                     /inference="COORDINATES: protein motif:HMM:NF012709.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HSQ14144.1"
                     /translation="MDTASLIFYLLATLLVIASLLVVFLRNVVHCAMALVSALLLIAV
                     LFVTLQAPMVGVLQVMVYAGAIMVLFLFVIMLLNPTALERQRGLWWGFGTILGLMLAG
                     VLVPLVMTNDLPADPVAATELFGSPEMLAKGLFSDFVLPFEIASVLLLVAIIGAVVLA
                     KREN"
     gene            2645..2947
                     /gene="nuoK"
                     /locus_tag="VLM90_14045"
     CDS             2645..2947
                     /gene="nuoK"
                     /locus_tag="VLM90_14045"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF004321.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HSQ14145.1"
                     /translation="MIALHNYLILSAVIFAIGVIGVLIRRNLIVILMSIELMLNAVNL
                     TFIAFSRYLGSTDGQVVVFFVMAVAAAEAVIGLAIIISVYRHRQSLDPQEMQLLKW"
     gene            2965..4866
                     /gene="nuoL"
                     /locus_tag="VLM90_14050"
     CDS             2965..4866
                     /gene="nuoL"
                     /locus_tag="VLM90_14050"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF005141.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HSQ14146.1"
                     /translation="MSTDLLRWIPLIPLLGSVINLFFGRAMGKQRAGALASAAVGASF
                     ALAFYIFWQLPATGIFRDLVYTWIQSGSFQVNFAFQVDALTAVMLLVVTGIGLLIHIY
                     SLGYMGHDPDMVRFFIYLNLFIFFMLVLVMGDNLLLLFVGWEGVGLCSYLLIGFWYHD
                     HNNTIAGNKAFIVNRIGDLGFIIGIFVLVAELGRQGIWTLDFGELQKHVKMLSPGTIT
                     LITFLLFIGATGKSAQLPLFVWLPDAMAGPTPVSALIHAATMVTAGVYMTARLHFLFA
                     LAPATLAVIAVIGAATAFFAATIALTQNDIKKVLAYSTVSQLGYMFLAVGMGAFGAAI
                     FHVFTHAFFKACLFLGSGSVIHALGGEQDMRKMGGLKAHMPKTYWTYVVATLAIAGVP
                     FTAGFFSKDLILWQTFSHGAGILWGVGLLTAGMTAFYMFRQLFMVFHGECRAGDHAKA
                     HLHESPAVMTWPLMILAVGSIFTGWLGAPEYLWGSRWDHWLAPIFGPAAEHHGTVSTE
                     LLVTALTLAVVAAGIYLAYLMYGKPGAQTAQQTANGIFYDISLNKYYVDEIYDFVFVR
                     PFTALAKFFASIVDPWVIDGAVNGLAATVRGFSTVWRGLQTGNVQHYAAMFLVGALAL
                     LAYYLGQLS"
     gene            4863..>5500
                     /locus_tag="VLM90_14055"
     CDS             4863..>5500
                     /locus_tag="VLM90_14055"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HSQ14147.1"
                     /translation="MISAQGFGDLTLLLAIPVIGAALLVFLPRRQSAGLFSVALLAGA
                     AAFLWSLKILVRFDGTNGEMQLVERVAWMPAFGIQYLVGIDGISIFLVLLTTFLLPLA
                     LLASWSVRDKVKEYLIFMLLLETGMLGAFLALDLVLFYVFWEVMLVPMYFLIGVWGGT
                     RRIYAALKFVLFTMSGSLLMLVAIIYLAARHAQVTQVLTFTVLQLYDLHLPM"
BASE COUNT          926 a         1514 c         1618 g         1442 t
ORIGIN      
        1 gtcgacattt gcccggtggg cgcgctcacc gaccgggatt ttcgtttcaa ggtgcgggtc
       61 tggtatttag acaagacccc gtccatctgc ccaggctgca gcaccggctg caacatcagc
      121 gtcgaggcct atcaaaacaa aatcgcgcgc ttcaaaccgc gccagaacga agcggtcaac
      181 agtcactgga tttgcgacga ggggcgttac tgttttcacg atcttgccgg cggcgagcgg
      241 ctgaccacgc cgctgattcg ccaagaaggc ggactggcac cggcgacttg ggaggcggcg
      301 ttgcaagccg tggtcaatgg tctgcgcggc gcgcagcctc tggcgggaat tctttccggg
      361 cgcagtacca acgaggaggc gtacttgttc gccaagctag tgcgcaagct ggccagcgat
      421 tgttccatgg aagttttcta tcaggaacgc cagctcaccg aagttcaaaa gattctgatg
      481 agcccggacc gttcgccgaa tttccgcggc gcccgcgaca tgggagtgaa ctcgaacggc
      541 ggtttcgccg ggctgatgca agcattggcc ggcaacaact tttccagcgc cttcatcgtc
      601 ggcgaggatt tgctcggagc caatggcgac agcgcgcaga ttcgcagcgc tttagagaaa
      661 cttagtttcc tggtggtgca agataccaag ctgaccgaga gcgccaagtt ggcccaggtg
      721 gttttaccgg cggcgcattt tggcgagaaa gagggcactt acaccaatcg ccagggccgg
      781 gtgcaaaagc tcaatgccgc ggtgatctgc cccgaagggg cgcgccaaga cagcgagatt
      841 tttttacgct tactcgatgg cgcggggcaa aagctcgatt atgcgacacc gagcgacatt
      901 ttcacggcgt tgaccagaga agtgatcgcc tacaatggac taacctacga ctcgatcggc
      961 gatcaagggt atgcattggg aagtggcggt ggcgcagcgt catgatcgtc gatctcgcga
     1021 ttatcaccct taaagccgtg ctggttgtcg gtatggtact caacctcgcc ggcgttctcg
     1081 gctggatcga gcgcaaggcc agcgcgctga tccaagaccg catcggtgcc aaccgggcgt
     1141 cgatttttgg cttcgccggc atgggtcttg tcaacacgtt gatcgccgat ccgctcaagt
     1201 ttctttttaa agaagacttc attccgccca agggcgaccg cttcttgcat accttggcgc
     1261 cgtgcatggc gctgttcccc gcgctggtca cctttgcggt cattccgttt ggcgatgtcc
     1321 tcaacatcgg cgagcgctcg atcaacctgc aggtggctaa tctcaatatc ggcatactct
     1381 acgtcttcgc catgggctcg ctcggtgtct atggcatcgt catcggcgcc tgggcatcga
     1441 acaataagtt ctccatgctc ggcggcgtgc gcggctcggc gcagatgatc tcctatgaaa
     1501 tcgccatggg cttatccgtc attggcgttt tgatggttta cgggacgtta gagctgcaag
     1561 atatcgcccg cggccagggc atgctgatcc gcgacctcat gcccagctgg ctgagttttt
     1621 taagtccgct ggtcggttgg ttgcccgctt ggggaatatt tctccagcct ctggcctttt
     1681 tgcttttttt taccgccgcg gtggcggaga ccaaacgcat cccgttcgac ttgccggaag
     1741 gggagtcgga gctggtcgcc ggctatcatg tcgaatattc cggcggcaag ttcttgatgt
     1801 tttttgccgg tgagttcgct gaggttgtca ccgtcgcggg cttggtgacg acgctgttct
     1861 tcggcggttg gcaggtgccc tatcttttgc gcgacggttt ccatttcccc tggggcggca
     1921 cctggctgct gccgcatatc ctaatcgtct tgctgcaagt aacggcattt acagtcaaag
     1981 tggtattttt ctgctggctg cagatcttat tgcgctggag cgtgccgcgc tttcgctacg
     2041 accaggtcat gcgcttgggc tggaaaatgc ttttgccgct ggcactgctt aacgtcgtcg
     2101 ccacggcgat ttgggtcctg gcggcacagt gaacgattga atccatggat accgcgagtc
     2161 tgattttcta cctgttggct accttgctgg tgatcgcgtc gctgctggtg gtgtttttgc
     2221 gcaacgtcgt tcactgcgcc atggcgctgg tatcggcgct gctcttgatc gcggtgttgt
     2281 tcgtcacttt gcaggcgccc atggtcggag tgttgcaggt gatggtctat gccggcgcta
     2341 tcatggtctt gtttcttttc gtcatcatgc ttctcaaccc caccgcgctg gagcggcagc
     2401 gcggtctatg gtggggcttc gggacaatcc tggggctgat gttggccggt gtgttggtgc
     2461 ctttggtgat gaccaacgat ttgcccgccg atccggtagc cgccacggag ttattcggca
     2521 gtcccgaaat gttggctaaa ggtttgttca gtgattttgt tctgcccttc gaaatcgcct
     2581 cggtgttgtt actggtggcg atcatcggcg cggtggtatt ggccaagcga gaaaattgag
     2641 ttccatgatt gcgctgcata actatctgat tctaagcgcg gtgatcttcg ccatcggcgt
     2701 catcggtgtg ctcatccggc gcaatctgat cgtcatcctc atgtccatcg agctcatgct
     2761 caacgccgtc aacctgactt tcatcgcgtt ttcacgctat ctaggctcga ccgacggcca
     2821 ggtggtggtg tttttcgtca tggcggtggc cgccgctgaa gctgtgatcg gccttgcgat
     2881 tattatatcc gtctatcgcc atcgccaatc tctggatccc caggagatgc agctgctcaa
     2941 atggtagaga ctagtcaaaa cctgatgagc accgatctgc tgcgctggat cccgctgatt
     3001 ccgctgttgg gcagcgtgat caatttgttc tttggccgcg ccatgggcaa gcaacgtgcc
     3061 ggtgccctgg cctcggcggc ggtgggtgca tcgttcgcgc tggctttcta tatattttgg
     3121 caactgccgg caacgggaat ttttcgcgac ctggtctata cctggattca gtcgggctcg
     3181 tttcaggtca atttcgcgtt tcaagtcgat gcgctgaccg cggtgatgct gctcgtcgtc
     3241 accggcatcg gtttgctgat ccatatttat tctttgggct acatgggcca tgacccagac
     3301 atggtgcgct tttttatcta tctcaacctg tttatctttt tcatgctggt gctggtcatg
     3361 ggcgacaatc tgctcttgct gtttgtcggc tgggagggcg tcggcctttg ttcttatctc
     3421 ttgatcggct tctggtatca cgatcacaat aacaccatcg ccggcaacaa ggcttttatc
     3481 gtcaaccgca tcggcgactt gggtttcatc atcggcattt tcgttttggt ggcggagttg
     3541 ggccgccagg gcatctggac cttggacttc ggcgagttgc agaagcatgt gaaaatgctc
     3601 tcacccggca cgatcacgtt gattaccttc ctgcttttca tcggcgccac cggcaagtcg
     3661 gcgcagttgc cgctgttcgt ctggctgccc gatgccatgg ctgggccgac gccggtgagc
     3721 gcgttgattc acgccgccac catggttacc gccggcgtct atatgacggc gcggctgcat
     3781 tttctcttcg ccttagcgcc ggcgaccttg gcggtgatcg ccgtgatcgg cgcggcgacg
     3841 gcatttttcg ccgccaccat cgcgctgacc cagaacgata ttaagaaagt cctggcctac
     3901 tcgacggtga gccaattggg ctacatgttt ctcgccgtcg gcatgggcgc ctttggcgcg
     3961 gcgatctttc atgtcttcac ccatgcattt ttcaaagctt gcctgttctt gggttcgggc
     4021 agcgtgatcc acgccctcgg cggcgagcag gatatgcgca agatgggtgg gctcaaggcg
     4081 catatgccca agacctactg gacctacgtc gtcgcgacat tagccattgc aggggtgccg
     4141 ttcaccgccg gttttttctc caaagatttg attctctggc agaccttcag ccacggcgca
     4201 ggaatcttat ggggcgtcgg gctactcacc gctggcatga cagcgtttta catgtttcgt
     4261 caactattca tggtttttca cggcgagtgc cgcgccggtg accatgccaa ggcgcatctg
     4321 catgaatcgc cagcggtgat gacttggccg ctgatgattc ttgccgtcgg ttcgatcttc
     4381 accggctggt tgggcgcgcc ggaatatctc tggggcagcc gttgggacca ttggctggcg
     4441 ccgatttttg gcccggctgc ggaacatcat ggtaccgtaa gcaccgaatt attggtgacc
     4501 gccctgactt tggccgtggt ggctgcggga atttatctgg cttacctcat gtacggtaag
     4561 cctggggcac agaccgcgca gcagacagcc aacggcattt tctacgacat ttcgcttaac
     4621 aaatattatg tcgacgaaat ttatgatttt gtttttgtcc gtccgttcac cgcgctggcc
     4681 aaatttttcg ccagcatcgt cgatccttgg gtgatcgatg gcgccgtcaa tggcctggcg
     4741 gccacggtgc gcggttttag taccgtctgg cgcggtttgc agaccggcaa cgtgcagcac
     4801 tacgcggcga tgtttttggt cggagccctg gctctactcg cctactacct cggacaactg
     4861 tcatgatctc agctcagggt ttcggagatt tgactctgct actcgccatc ccggtgatcg
     4921 gcgcggcgtt gttagtgttt ttgccacggc gccagtcggc cgggctgttc tccgtcgcgt
     4981 tgctcgccgg cgcggcggcg tttctctggt cgctaaaaat actcgttcgc ttcgacggca
     5041 cgaatggcga gatgcagctg gtcgagcggg tggcatggat gccggctttc ggtattcaat
     5101 acctcgttgg catcgacggc atcagtatct ttctggtttt gctgacgacc tttcttttgc
     5161 cgctggcgct gttggcctcc tggtcggtgc gcgacaaggt caaagaatat ttgattttca
     5221 tgctgctctt ggaaaccggc atgcttggcg ccttcttggc gctcgatctg gtgctgttct
     5281 atgtgttctg ggaagtcatg ctggtgccga tgtatttctt gatcggcgtg tggggaggga
     5341 cgcggcgcat ttatgcagcg ttgaaattcg ttcttttcac catgtccggc agcttgctca
     5401 tgctggtggc gatcatctat ctcgccgcgc gtcacgctca ggtgacgcaa gtgctgactt
     5461 ttaccgtttt acaactatac gatttgcact tgccgatgga
//
LOCUS       DATIRS010001103         2659 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_82711, whole genome shotgun sequence.
ACCESSION   DATIRS010001103 DATIRS010000000
VERSION     DATIRS010001103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2659)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2659)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2659
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82711"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..334
                     /locus_tag="VLM90_14060"
     CDS             <1..334
                     /locus_tag="VLM90_14060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14148.1"
                     /translation="ALAATVYMALLGKSGLRRIAEINVARAHDAKAQLLRQPGFKPMF
                     SGPFFNEFVLRSGNLSQLFADCAAQRMVPGIPLAQWYPELKDSFLMCVTEMNEREEID
                     RLVRTSAG"
     gene            312..1817
                     /gene="gcvPB"
                     /locus_tag="VLM90_14065"
     CDS             312..1817
                     /gene="gcvPB"
                     /locus_tag="VLM90_14065"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: protein motif:HMM:NF003346.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPB"
                     /protein_id="HSQ14149.1"
                     /translation="MSEPAQDKNRSQAAPPKLLFESGSPGRSAIEWAVEGGKVEESIP
                     SHLLRRDIDGFPELGELEVLRHFTGLSQRNFSIESQFYPLGSCTMKYNPKINEVVARL
                     PGFAQLHPMASPEHLQGALALLFELEQMLAEVSGMEHVSLQPSAGAQGELTGLMLIRA
                     CLSERGDPRKNIIVPDTAHGTNPESSTLCGYDVIQISSNDKGVIDAAAVEKVMDRDVA
                     AIMITNPNTLGLFESNIEAIGQIVHAKGGMVYLDGANLNALMGVAKPGHMGVDVLHMN
                     LHKTFSTPHGGGGPGAGPVGVKAQLRDYLPVPRIVQAGDKFVLDENEPKSVGRVRSFL
                     GNFGVLLRAYTYILSLGGDGLAEASRMALLNANYIRKKLEKSYQLAYNEPCMHECILT
                     DRMQHKNGVTTLDIAKRLLDYGYHPPTIYFPLVVSGALMIEPTETETPETLNGFCDAM
                     LAIAQEAKDDPELVKSAPHSTPVGRLDEARAARKPVLRWESGQAKNGSAEQ"
     gene            complement(1846..>2659)
                     /locus_tag="VLM90_14070"
     CDS             complement(1846..>2659)
                     /locus_tag="VLM90_14070"
                     /inference="COORDINATES: protein motif:HMM:NF024503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HSQ14150.1"
                     /translation="LSLAIHAALFCYFILKQKLAWKTRAEPPAIPVSLLPPGEKVLVP
                     AVPPTATKIVKPPAIVAKKDSPIAKRKELRPQANQARERTRSTTAEKTAVAIEKSSLA
                     ERNRDEQVAGLPVPTSAETQRELPIEKSVVAERRLPTVKELLPPLTYSSEGGRSSAPV
                     SLNTHDPAYMSYFNRIKQAINQKWEYPELAKRYGLQGTLFLEFAIGANGQLEHLRLVR
                     SSGSQLLDDEALRAIKAAAPFAPIPSWIKNNPLPISATMEYHDSRLNYPSTR"
BASE COUNT          534 a          757 c          813 g          555 t
ORIGIN      
        1 cgcccttgcc gccaccgtgt acatggcact gctgggcaaa tcaggattgc gccgcattgc
       61 cgagatcaac gttgcccgcg cccatgacgc caaagcgcag ttattgcggc agcccggatt
      121 taagccgatg ttctccggac ccttcttcaa cgaattcgtt ttgcgatcgg ggaatctgtc
      181 gcagcttttc gccgactgcg cggcgcagag aatggtgccg ggtatcccgt tggcgcaatg
      241 gtatcccgag ctgaaagaca gtttcctcat gtgcgtgacc gaaatgaacg agcgagagga
      301 gatcgatcgc cttgtccgaa ccagcgcagg ataagaaccg ttcccaggcg gcgccaccga
      361 aactgttatt cgagagcggc tcgccggggc gaagtgccat cgagtgggcc gtagagggcg
      421 gtaaggtcga agagtcgatt ccgtcacatt tactgcgccg ggacatcgac ggcttcccag
      481 agcttggcga gcttgaagtg ctgcgtcatt tcaccgggct gtcgcaacgc aacttctcca
      541 tcgagagcca gttctacccg ttgggctctt gcacgatgaa gtacaatccc aagatcaacg
      601 aagtcgtggc gcgtctgccc ggcttcgcgc agctccaccc catggcgtcg cccgagcatt
      661 tgcaaggcgc gctggcgctg ctcttcgagc tcgagcagat gctcgccgaa gtgagcggca
      721 tggagcatgt aagcttgcag ccttccgcgg gcgcgcaggg cgagctcacc ggtttgatgc
      781 tgattcgcgc ctgcctgagt gagcgcggcg atccgcgcaa aaatatcatc gtgcccgaca
      841 ctgcccatgg caccaacccg gagagttcaa ctttatgcgg ctacgacgtg atccagattt
      901 cctccaacga caaaggcgtt atcgacgccg ccgcggtgga aaaagtcatg gatcgagacg
      961 tcgcggcgat catgattacc aatcccaata ccctcggcct gttcgagagc aatatcgaag
     1021 cgatcggcca aatagtccac gccaaaggag gcatggttta cttggacggg gcgaacttaa
     1081 acgcgcttat gggcgtggcc aagccgggcc atatgggcgt cgacgtttta cacatgaatt
     1141 tgcacaagac cttctccacg ccccatggcg gcggcggtcc gggggcgggg ccggtgggcg
     1201 tcaaggcgca attgcgcgac tatctgccgg tgccacggat cgtccaggcg ggcgacaaat
     1261 ttgtgttgga cgagaacgag cccaagtcgg tgggccgggt gcgctcgttt ctcggcaact
     1321 tcggcgtgct cttgcgcgct tacacctata ttctttcact cggcggcgat ggccttgcgg
     1381 aggcgagccg catggcgttg ctcaacgcca actacattcg caagaaactc gaaaagagct
     1441 accaactggc gtacaatgag ccgtgcatgc atgagtgcat tctgaccgat cgtatgcagc
     1501 acaaaaatgg cgtgaccact ctcgatatcg ccaagcggct gctcgactac ggctatcatc
     1561 cgccgacgat ttattttccg ctggtggttt ccggcgcctt gatgatcgag ccgaccgaaa
     1621 ccgaaacgcc ggaaacctta aatggatttt gcgacgcgat gttggccatc gcccaggagg
     1681 ccaaagacga ccccgagctg gtcaagagcg cgccccattc cactcccgtg ggccggctcg
     1741 acgaggcgcg cgcggcgcga aagccggtgc tgcgctggga gagcggtcag gcgaagaacg
     1801 gatcggccga gcaatagact atcgacgacc gagccctgga ttgcctcaac gggtggaggg
     1861 gtaattaagt cgactgtcgt ggtattccat cgtggccgaa atcggcagcg gattgttctt
     1921 gatccacgac ggaatcggcg cgaatggcgc agccgctttg atcgcacgca gcgcttcgtc
     1981 atcgagcaac tgggagccgg aagatcgcac cagtcgcaaa tgttcaagtt gaccattggc
     2041 tccgatggcg aactccaaaa acagagtacc ttgcagaccg taacgtttcg cgagttcagg
     2101 atattcccat ttttggttga ttgcttgctt gattcgattg aaataactca tgtaggcagg
     2161 atcatgggtg ttcaaactga ccggtgcgct gcttcgtccg ccctcgcttg aataggtaag
     2221 cggcggtaag agctctttga ccgtcggcag ccggcgctcg gcaaccacgc tcttttcgat
     2281 cggcagctcg cgttgcgtct cagccgatgt cgggactggc agtccggcga cctgttcgtc
     2341 gcggttgcgt tcggctagcg aggacttttc aatggcgacg gcagttttct ccgcggtagt
     2401 actgcgggtg cgctctcggg cttggttggc ttggggccgc aattctttcc ttttggcgat
     2461 cggtgagtcc tttttggcga cgattgccgg gggtttgaca atcttggtcg ccgtgggcgg
     2521 cacggccgga accaaaactt tctcgccggg cggcagtagc gaaaccggga tcgccggtgg
     2581 ctcggcgcgt gtcttccacg ccaatttttg ctttaggatg aagtagcaaa atagcgcggc
     2641 atggatcgcc agtgaaagc
//
LOCUS       DATIRS010001104         1890 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_82859, whole genome shotgun sequence.
ACCESSION   DATIRS010001104 DATIRS010000000
VERSION     DATIRS010001104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1890
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82859"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            507..908
                     /locus_tag="VLM90_14075"
     CDS             507..908
                     /locus_tag="VLM90_14075"
                     /inference="COORDINATES: protein motif:HMM:NF015862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HSQ14151.1"
                     /translation="MAIPGEKAIQMVRNAHTQAAQLDIAVTAAVVDQSGRMIALGRMD
                     KARPITVEIALNKAYTAASFQQQTKDLAGVANQAWFQSLVVSSSGKVMPGGGAIPVVE
                     GGNVVGAIAVSGGTDDQDQKCAEVALAAYQT"
     gene            993..>1890
                     /locus_tag="VLM90_14080"
     CDS             993..>1890
                     /locus_tag="VLM90_14080"
                     /inference="COORDINATES: protein motif:HMM:NF024877.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reductive dehalogenase domain-containing
                     protein"
                     /protein_id="HSQ14152.1"
                     /translation="MSKAEKLEPAPEPSTSTEFPPPYLGRTVRIVGEFVNVDMNQSPH
                     PKNQRGELGKPLFNWYHNTVSKDPLTRVSAPNHFADRRHFLSTVVNQAAKGKINPNKV
                     PVNDPAAMARHIKAVAHYMGADVVQIAAAHPNYLYATGGGRYVQDGTAKDEYATHTPD
                     QLARKFPYIIMATTAWDYNKLQAHRHLIGDAAYHVSQIKGNMILKALEGYIKELGYTA
                     LRGVAVPQAVGVASGVGELGRNGLVINKNFGARVHMPDPIMTDLPLVADGPVDIGVDD
                     FCKICRKCANTCPTNSIPVGDKV"
BASE COUNT          462 a          554 c          519 g          355 t
ORIGIN      
        1 actttggctt gaagtactat gattttcgcg gccggatgcc ggatgaacta tttcgggata
       61 gctactatct taaaccagaa ggcaaaaccg cgttcagcca actggtcgct gccgaagtgt
      121 tacaaccgct attgcgctca cattagccaa gacgagagaa cgacgccaag atggattgaa
      181 atagatcctt ggaatcgcgc aacttgccgt ggctgaggga atgaaaacac caccgaacga
      241 cccaagcctc ccctaggtgc gcagtttgct gcacaggcct ccgccacacc gcccaagtaa
      301 agaccaaacc acgcaataga cgaaaattat gagaatccgg aaatcctttt tattgtattc
      361 aattcctgcg gtgtcaattg catacgccac ccgccggcac aaaattaccc gccggttttt
      421 gactgtcatg ctttgccctt gactggcgat acccatttcc tgctaaagta gattacagcc
      481 caacaacgag gaggtttgcc gacaaaatgg ctattcctgg agaaaaagcg attcaaatgg
      541 tgcgcaacgc gcacacccaa gcggcgcagt tggacatcgc tgtgacggcg gcggtggtcg
      601 atcagagcgg gcggatgatc gcactcgggc gcatggacaa agcgcggccg atcacggtag
      661 agatcgcgct caataaagct tacactgcgg cgagtttcca acagcagacg aaggatttag
      721 ccggcgtggc caatcaagcc tggtttcaaa gtctggtggt atcgagcagc ggcaaggtca
      781 tgcccggcgg cggcgccatc ccggtggtcg aaggcggcaa cgtcgtcggc gccatcgcag
      841 tctcgggcgg caccgacgat caagatcaaa aatgcgccga agtggcgctg gcagcgtacc
      901 agacttgaga cagagaccgc cccgcccgtt actcgtattt ccttctctgt ctctatctac
      961 cgtctctatc tgatttaacc ggaggagcga aaatgtccaa agctgaaaaa ttagaacctg
     1021 caccggaacc aagcaccagc accgagttcc ccccgcccta tctcggccgc acggtgcgca
     1081 tcgttggcga gtttgtaaac gtcgacatga accagtcgcc gcatccgaag aatcagcgcg
     1141 gcgagctggg caagccgctg ttcaactggt accacaacac ggtctcgaaa gatccgctga
     1201 cgcgggtgtc agcgcccaat catttcgccg accgccgcca ttttttgagc accgtcgtca
     1261 accaagcggc caagggcaaa atcaatccga acaaagttcc ggtcaacgat ccggcggcga
     1321 tggcgcgtca tatcaaggcg gtggcccatt atatgggcgc ggatgttgtg cagatcgccg
     1381 cggcccaccc aaactatctt tacgccactg gcggtggccg ctatgtgcaa gacggcacag
     1441 ccaaagatga atatgcgacg cacacgccgg accagctggc gcgcaagttc ccctacatca
     1501 tcatggccac caccgcgtgg gactataaca agctgcaagc gcaccgccat ctgatcggcg
     1561 acgccgccta tcatgtgtcg caaatcaaag gcaacatgat tttgaaagcg ctcgaaggat
     1621 atatcaaaga actcggttac acggcgctgc gcggcgtagc ggtaccgcag gcggtgggtg
     1681 tggcctcggg tgtcggcgag ctcggccgca acgggctagt gatcaacaaa aacttcggcg
     1741 cgcgcgtgca catgcccgac ccgatcatga ccgacttgcc gctggtggcg gacggaccag
     1801 tggacatcgg tgtcgacgac ttttgcaaaa tctgccgcaa gtgcgccaat acctgcccga
     1861 ccaatagtat cccggttggc gacaaggtcg
//
LOCUS       DATIRS010001105         3073 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_968266, whole genome shotgun sequence.
ACCESSION   DATIRS010001105 DATIRS010000000
VERSION     DATIRS010001105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3073
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_968266"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(5..748)
                     /locus_tag="VLM90_14085"
     CDS             complement(5..748)
                     /locus_tag="VLM90_14085"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HSQ14153.1"
                     /translation="MIKPCAVIPVYNHQAAVTAVVSGVLARQLACIVVDDGSTPACAA
                     VLDGLAAATPRQVTLLRHPANRGKGAAVLTGIRHAARAGFTHVLQIDADGQHRVEDIA
                     RFVAQAASHPQALVIGSPRFDDSVPGLRLWARYLTHAWVSINTLSRRIEDSMCGFRVY
                     PLAPLLELDRQRKLGARMSFDIEVLVRLCWAGIEIINVPTAVSYPKDGVSHFRGGLDN
                     LLISRLHATLFFGMLLRLPTLLARKRSVL"
     gene            complement(741..2495)
                     /locus_tag="VLM90_14090"
     CDS             complement(741..2495)
                     /locus_tag="VLM90_14090"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSQ14154.1"
                     /translation="MAHPLNLLSTLNASRSADQVIGWRNGAAVGWDAFHGRVAAWSGL
                     LGETAGDAFALVHHDTIEFAAALFGAWLARKTVFLPGDNLPSTCAGLRANVAGFLGEF
                     DAEWQPKAAPLWNPDHRSTRFAAIDADIVGLVLFTSGSTGDAQPIAKTLGQMAAEVAH
                     LEKQFGALLGAADVITTVSHQHIYGLLFNVLWPLAAGRRIQARSLSWFEDLSATLAAR
                     DAVLISSPAHLSRLPENPGWAKAAQRLRAVFSSGGPLSFETAQECQRLLGRVPIEVYG
                     SSETGGIAWRQQDRPEHQAWTALPGVEWRLDAIDANGAEDSAAEVLAVRSEHLPSKDW
                     FCTADRARAAGDGRFFLGGRIDRIAKIEGKRISLSAIEKLLMASPLVQLARAIAVDGR
                     RQRVAAFVVPSERGGEELGVLGRRGFTRLLRRLLDESIDPVAMPRLWRFIEALPVNPQ
                     GKTSHADLLALLEAPPVLRTEPRSRLLERDAEHALFELVAPADLIYFDGHFQGQPILA
                     GVVQVDWAIAFGRRCFALPPRFRAIQMLKFQRLIGPDTPFRLELVYQPASATLTFKIS
                     TALGTHASGRLLFGGADD"
     gene            complement(2470..3036)
                     /locus_tag="VLM90_14095"
     CDS             complement(2470..3036)
                     /locus_tag="VLM90_14095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14155.1"
                     /translation="MRGALRALAIVITLLFPLALWLVEGRVAPAWLAALLLLGGMVRL
                     PAAAPTGATRYWAGGTILLAISTFWSGALLPLRFYPVLVSGAFFTVFAYSLIVPPSTI
                     ERLARLHEPQLPPAAVAYTRRVTQVWCVFFALNGAIALYTALFASMAQWSFYNGFLAY
                     FLMGILFAGEYCARCYFKRRHGSSAQSA"
BASE COUNT          667 a          988 c          946 g          472 t
ORIGIN      
        1 ggcattacag cacgctcctt ttgcgcgcca gcaaagtcgg taaacgcagc agcatgccga
       61 aaaatagcgt cgcgtgtaaa cgcgagatca gtaaattgtc caggccgccg cggaaatgcg
      121 ataccccatc tttcggatag ctcaccgcgg ttggtacatt gatgatctcg atgccggccc
      181 aacagagccg caccagcact tcgatatcga agctcatgcg cgcgccgagt ttgcgctgac
      241 ggtcgagttc gagcagcggc gccaacgggt agacacggaa gccgcacatg gagtcttcga
      301 tgcgccgcga caaagtgttg atcgataccc aagcatgggt cagatagcgt gcccataggc
      361 gcagcccagg cacgctatca tcaaagcgcg gcgaaccgat caccagcgcc tgcggatggc
      421 ttgccgcctg cgcgacaaag cgcgcgatgt cttcaacccg gtgctggccg tcggcgtcga
      481 tctgcagcac gtgggtaaaa ccggcccgtg cggcgtgacg aatgccggtg agcaccgcgg
      541 cgcccttacc gcgattggcc ggatggcgca gcaaagtgac ttgacgcggc gtcgcagcag
      601 ccaggccatc gagtaccgcc gcacacgccg gtgtgctgcc atcgtcgacg acgatgcaag
      661 ccagttgccg cgccagcacg ccgctgacca ccgcggtcac cgccgcttgg tgattgtaaa
      721 ccggaatcac cgcgcacggc ttaatcatcg gcgccaccga acagcagccg gccgctggca
      781 tgggtgccga gcgccgtgct gatcttgaat gttaacgtgg cgctcgccgg ttggtacacc
      841 agttcgagcc tgaacggcgt atccggcccg atcaggcgct gaaatttcag catctggatg
      901 gcgcgaaacc gtggcggcaa ggcgaaacag cgccgcccga aagcgatcgc ccaatcgact
      961 tgtacgacac cggcgagaat cggctgacct tggaaatggc cgtcaaaata aatcagatcg
     1021 gcgggcgcaa ccagctcaaa aagcgcgtgt tcggcatcgc gctcgagcaa gcgcgagcgc
     1081 ggctcggtcc gaagtactgg cggcgcctca agcagcgcga gcagatcagc gtggctggtc
     1141 ttgccttgag gattgaccgg caatgcctcg ataaagcgcc acaggcgcgg catggccacc
     1201 gggtcaatag actcatcgag caggcggcgc agcaagcgcg tgaagccgcg ccggccaagc
     1261 acgccgagct cttccccgcc gcgctccgac ggcacgacga aggcggccac ccgttggcgc
     1321 cgaccatcga cggcgatcgc gcgggcaagc tgcaccagcg gcgaagccat cagcaatttt
     1381 tcgatggcgc tgagggaaat ccgcttaccc tcgatcttgg cgattcgatc gatccggccg
     1441 ccgagaaaaa atctgccgtc acccgctgct cgcgcccggt ccgcggtgca aaaccaatct
     1501 ttgctcggca gatgttccga gcgtaccgcg agaacttcag ccgcggaatc ctctgcgcca
     1561 tttgcgtcaa tcgcatcgag gcgccactcc accccgggca gcgccgtcca cgcttggtgc
     1621 tcagggcggt cctgttggcg ccaggcgatg ccgccggttt ccgagctgcc atagacttcg
     1681 atcggcactc gcccgagcaa acgttggcac tcctgggcgg tctcgaacga caacggccct
     1741 ccagacgaga ataccgcgcg cagtcgctgc gctgcctttg cccagccagg attttccggc
     1801 aggcggctaa gatgggccgg actggaaatt aacaccgcgt cgcgcgccgc caaagtggcc
     1861 gagagatctt cgaaccatga gaggctgcgt gcctgaatcc ggcgcccagc ggcgagcggc
     1921 cataaaacgt taaacagcag tccgtaaata tgttgatgcg acaccgtggt gatgacatcc
     1981 gccgcgccaa gcaaagcgcc aaattgtttt tccagatgcg ctacttccgc cgccatctgg
     2041 ccgagagttt tggcgatcgg ctgagcgtcg ccggtgctgc cggaggtgaa aagcacgaga
     2101 ccgacaatat ccgcgtcgat ggccgcgaag cgggtagatc tatgatccgg attccatagc
     2161 ggcgccgctt tgggctgcca ctcagcgtcg aattcgccca ggaagcctgc cacgttggcg
     2221 cgcagaccgg cgcaagtgct aggcaagttg tcgcccggca gaaaaaccgt cttgcgcgcc
     2281 agccaggcgc caaatagcgc ggcggcaaac tcgatggtgt catggtgcac cagcgcaaac
     2341 gcgtcaccag cagtttcgcc gagcaaccca gaccaggcag cgacccggcc gtggaacgca
     2401 tcccaaccaa ccgccgcgcc gttgcgccag ccgataacct ggtcggctga gcggctggca
     2461 ttgagggtgc taagcagatt gagcggatga gccatggcgg cgcttgaagt agcagcgggc
     2521 acaatattcg ccggcaaaga gaattcccat tagaaaataa gccagaaagc cattgtagaa
     2581 tgaccactgc gccatggagg caaatagcgc ggtgtagagc gcgatggcgc cgttgagcgc
     2641 gaaaaatacg caccacacct gcgtgactcg gcgcgtgtaa gcgacggcgg ccggcggcag
     2701 ctgtggttcg tgcaggcgcg ccaaccgttc gatcgtcgac ggcggcacga tcaggctgta
     2761 agcaaatacc gtaaagaatg cgccgctaac cagcaccgga taaaatctta gcggcagcaa
     2821 agcgccggac caaaacgtcg agatcgccag cagaatcgtc ccaccggccc agtagcgcgt
     2881 cgccccggta ggcgcggcag cgggcaagcg caccatgccc cccagcaaca acagcgcggc
     2941 caaccacgcc ggcgccaccc ggccttcgac gagccagagc gccaacggaa aaagcagcgt
     3001 aatcacgatg gccaatgccc ggagcgcgcc gcgcataggc atctattgct ccatcaactc
     3061 ggccaacgcg tcg
//
LOCUS       DATIRS010001106         1806 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_82909, whole genome shotgun sequence.
ACCESSION   DATIRS010001106 DATIRS010000000
VERSION     DATIRS010001106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1806
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82909"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(256..1335)
                     /locus_tag="VLM90_14100"
     CDS             complement(256..1335)
                     /locus_tag="VLM90_14100"
                     /inference="COORDINATES: protein motif:HMM:NF013697.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ14156.1"
                     /translation="MRLIIYFLLIGGLIVGPGSGASAASIDEVVKKASALSGAERKTF
                     LEAGAKKEGEIVFYTSLSLTDYPKILPHFEKAYPFLKTNTYRATPSGLFTRVDTEARA
                     GRFAADVIGSAPVEMWQLKQRKLSAPYLSPERRALQPGAFDPEGFWQDFDVTPLVLGF
                     NTKQVSAADAPRSYADLLHPKWKGKMSLGTEEYTWFNVLLETMGKAKGNDLMQGLAKQ
                     DLAMPGSSSVMRVQLMLAGESAIAIAARGRRVSEFKQQGAPIDYRVLDPSAGEPNFVT
                     LMQRAPHPFAAVLFIDWMLSEEGQTRMAEVGRLSVRRGIKHRAWVQELFQKDFVFLSP
                     SSIGPNLNDIIDQYNRTFGVQRRAK"
     gene            complement(1349..1726)
                     /locus_tag="VLM90_14105"
     CDS             complement(1349..1726)
                     /locus_tag="VLM90_14105"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSQ14157.1"
                     /translation="MAKLRHLAILTHQPAKMADYYKRVFDMQEMYKTKNGSVHLSDGE
                     VNLAILNANDPKEPGHPAGLYHFGFHIDDAQETTKRIMDVYPEGAPKDRIATYAEGRA
                     SDPDGNLIDISTTGWGPVRRNDL"
BASE COUNT          368 a          538 c          512 g          388 t
ORIGIN      
        1 cgtagagttg atgctccgac ttgcccggat aggaaaactc ggtgaataat ccaatcttca
       61 tggagtgaac tggcacttaa aacaagggcg gatgattatc cgcccctaga aattccaatt
      121 ctattttgcg ttctttgagc tctttgcggt taattgtccc cggcttcggt ccgagggcgg
      181 gtttaaaacc cgcccctagg aattcccttt gcgtcttttg cgttctttgc ggctcatcga
      241 tccgagatcc cagacttact tcgcgcgccg ctgcacgccg aaagtccggt tgtactgatc
      301 gatgatgtca ttcaagttgg ggccgatcga cgacgggctc aagaacacaa aatctttttg
      361 aaatagctcc tgcacccagg cccggtgctt gatgccgcgg cgcacggata agcgcccgac
      421 ctcggccatg cgcgtctggc cttcttccga gagcatccaa tcgataaaca agaccgctgc
      481 gaacggatgg ggtgcccgct gcatcagggt gacgaagttg ggttcgccgg cagagggatc
      541 gagcacgcgg tagtcgatgg gcgcgccctg ctgcttgaat tccgacacgc gccgcccgcg
      601 cgccgcgatg gcgatggccg actcgccggc gagcatgagc tgcacgcgca tgacgctgct
      661 tgaaccgggc atggcgagat cctgctttgc caggccctgc attaaatcgt tgcccttggc
      721 cttgcccatg gtttcgagga gaacgttgaa ccaagtgtac tcctcggtgc ccaagctcat
      781 cttgcccttc cacttgggat gcaataagtc ggcgtagctg cgcggcgcgt cagcggcgga
      841 aacctgcttg gtgttgaagc ccagcaccag cggcgtcacg tcgaaatcct gccaaaaacc
      901 ctcgggatcg aaagcgccgg gctggagcgc gcgccgctca ggcgagagat acggcgccga
      961 cagcttgcgc tgcttgagct gccacatctc caccggcgcc gagccaatca cgtcggcggc
     1021 gaatctgccg gcgcgcgctt cggtgtccac ccgcgtgaac aagccggacg gcgtcgcgcg
     1081 ataagtattg gtcttgagaa aggggtaggc tttttcaaaa tgcggcaaga tcttcgggta
     1141 atcggtcaag ctcagcgaag tatagaagac gatctcgcct tctttcttcg cccctgcttc
     1201 gagaaaagtc ttgcgctcgg cgccggacag cgccgaggct ttcttgacga cttcgtcaat
     1261 cgaggcggcg ctggcgccgc tccccggtcc aacaatcaag ccgccgataa gtaagaagta
     1321 aataatcagc cgcatgcgcc agccgcaatt acagatcgtt gcggcgaacc gggccccagc
     1381 ccgtcgtcga gatgtcgatc aagttgccat caggatcgct ggcccgccct tcggcgtaag
     1441 tcgcaatccg atccttcggc gcgccctcgg gataaacatc catgatccgc ttggtggttt
     1501 cctgggcatc gtcgatatga aagccgaagt gatacagccc cgccggatgt ccgggctctt
     1561 tgggatcatt ggcgtttaga atcgcgagat tcacctcgcc gtcggaaaga tgcaccgaac
     1621 cgttcttggt tttgtacatc tcctgcatgt cgaaaacccg cttgtaataa tccgccatct
     1681 tcgccggctg atgggtcaag atcgccaaat gtctgagctt agccatgatc gtccctccta
     1741 cttaattgca agtcatgtca gcgctatcac cgcacaaaaa gcctgtcaac gtagtcggca
     1801 agggcg
//
LOCUS       DATIRS010001107         2811 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_772174, whole genome shotgun sequence.
ACCESSION   DATIRS010001107 DATIRS010000000
VERSION     DATIRS010001107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2811)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2811)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2811
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_772174"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..558
                     /locus_tag="VLM90_14110"
     CDS             <1..558
                     /locus_tag="VLM90_14110"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSQ14158.1"
                     /translation="DTILKTAAQDGMEITHAFVTHTHPDHVGGAFAGVEIAGVSELLE
                     KCKAKVVVHKAEAEFLKGLVASDLVKTDHGDKIDVGGIEIELMHTPGHTPGSQCFLVD
                     GRVVSGDTMFIDACGRVDFPGGNAEQMYYSLTQKLMALPNETILFPGHNYAALAHATI
                     GEQKKTNPYLRFGSLKQFLAAMGYR"
     gene            complement(675..1712)
                     /locus_tag="VLM90_14115"
     CDS             complement(675..1712)
                     /locus_tag="VLM90_14115"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14159.1"
                     /translation="MNKNLCALAIVIMAGSAVTVSAQQKEEITITTAVSNLAFSAVWV
                     AEQLKYFDQEGVRAKVVVAGGGSQCQSAVVGRSAQFCASSSEGLILAYAEGAPLIAVQ
                     SHNRNMTLTVGVRKAIVDKLKLTRKSPLPERMQVVNHLGTIGTTGPGAVSEQIFRFMA
                     NKAKGADPSKLKFAALGGNELVPALMNNVIDGFAQSPPSVEITEAAGKGYALIPLGLG
                     EIPEFTDYHFEVLMARPDYAEANRATTTAVSRAISRAGALYHSKPNEFKAALRAHKFS
                     DKSKLEDDVFNLAYSMVAPAMPKWGNMTVDGWNKIINFAAGAGMLKDRAKIPTATEGL
                     LWTNKFIGKAP"
     gene            complement(1723..2559)
                     /locus_tag="VLM90_14120"
     CDS             complement(1723..2559)
                     /locus_tag="VLM90_14120"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSQ14160.1"
                     /translation="MSTDRQSQVRRMPTLSQPGWRRNLMIHAIRIFVVVGFFLLWEVA
                     SGRWVEAFLISSPSKIWKAFLQAFQSGELINNTWVTFQEIGIGFPIGALTGIWTGYIF
                     GRSKALADIFEPIIIALYGVPRTALAPLFIVWLGIGIWSKVGVVFILVFFLNFFNTYA
                     GMKQLDQEFVDLARLMGANRWRLSFRVILPAVSPYIITGFKTSIPFSVIGAITGEFIA
                     ATEGLGYYIRAAAGVFRTADVFVGIAVLMIIVILMNKVADLIERRVLRWQTQTESVQV
                     QG"
     gene            2609..2809
                     /locus_tag="VLM90_14125"
     CDS             2609..2809
                     /locus_tag="VLM90_14125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14161.1"
                     /translation="MAENIPQPRMGFVKTILPVDFENIARPGHGHGDYVANSPGPVGH
                     DYHTVGQRHGFDQIMGYEDFRS"
BASE COUNT          594 a          780 c          853 g          584 t
ORIGIN      
        1 gacacgattc tcaagaccgc ggcccaggat ggcatggaga ttacccacgc tttcgtcacg
       61 cacacccacc cggatcatgt tggcggcgcg ttcgccggcg tcgagatcgc cggcgtgagt
      121 gaattgttgg agaagtgcaa agccaaagtg gtggtgcata aagccgaggc ggagtttctc
      181 aaaggcttgg tagcgtcgga cctggtcaag accgatcacg gcgacaagat cgacgtcggc
      241 ggtatcgaga tcgagctcat gcacaccccc ggccacacgc cgggctcgca gtgcttcctg
      301 gtcgacggcc gcgtggtttc aggcgacacg atgttcatcg acgcctgcgg ccgcgtggac
      361 ttcccgggcg gcaatgccga gcagatgtat tacagcctga cgcaaaaact gatggccctg
      421 cccaatgaaa cgattctgtt tcccggccac aactacgctg cgcttgcgca cgccaccatc
      481 ggcgagcaga agaagactaa tccctattta agatttggct cgctgaaaca attcctagca
      541 gcgatggggt atcgctgagc gttgggcgct cagcgaattc cagattacaa attccagatt
      601 caatagccgg gctgcgatca gtggcaaatt cccaatctgg aatttggaat ctgtgatttg
      661 aaattttgca gggattacgg cgctttgcca atgaatttgt tggtccagag caatccttcg
      721 gtggctgtcg ggatcttcgc gcggtctttc aacatgccgg cgccggcggc gaagttgatg
      781 atcttgttcc agccgtccac cgtcatgttg ccccacttgg gcatggccgg agcgaccatg
      841 ctgtaggcca ggttgaacac atcgtcttcc aacttcgatt tgtcggaaaa tttgtgggcg
      901 cgcagggcgg ctttgaactc gttgggtttg ctgtgataga gcgcgccggc gcgggagatc
      961 gcgcgggaca ccgcggtggt ggtggcgcgg ttggcctcgg cgtagtcggg gcgggccatc
     1021 aaaacttcaa agtgatagtc ggtgaattcg gggatttctc ccagccccaa cgggatcagc
     1081 gcgtagcctt tgccggcggc ttcggtgatc tccaccgatg gcggtgattg ggcgaagcca
     1141 tcgatgacgt tgttcatcag cgccggcacc agttcattgc cgccgagggc ggcgaacttc
     1201 aacttgctcg ggtcggcgcc tttggccttg ttggccatga agcgaaagat ttgctccgac
     1261 accgcgcctg ggccggtggt gccgatggtg ccaaggtgat tcaccacctg catgcgctct
     1321 ggcagcggac ttttgcgcgt gagctttaat ttatcgacga tcgctttgcg cacgccgacg
     1381 gtgagcgtca tgttacggtt atgcgactgc acggcgatca gcggcgcgcc ttcggcgtag
     1441 gcaaggatca aaccttccga cgacgaggcg cagaactgcg ccgaacggcc gaccacagcg
     1501 ctctggcatt gcgagccgcc gccggcgacg acgactttgg cgcgcacgcc ttcctggtcg
     1561 aaatatttca actgctcggc gacccagacc gccgagaagg ccaggttgga aaccgccgtg
     1621 gtgatagtaa tttcttcttt ttgctgagcg ctgacggtga cggcgctccc ggccatgatg
     1681 acgatggcca gcgcgcatag gtttttattc attgaaacct ccttatcctt gtacctggac
     1741 gctttcggtc tgagtctgcc agcgcaacac gcgccgttcg atcagatcgg caactttgtt
     1801 catcaggatt acgattatca tcaagacggc gatgccgaca aacacgtcgg cggttctaaa
     1861 cacgccggcg gcggcgcgga tataatagcc cagcccttcg gtggcggcga tgaattcgcc
     1921 ggtgatggcg ccgatgaccg agaacgggat gctggttttg aaaccggtga tgatgtacgg
     1981 cgacaccgcc ggcagaatga cgcgaaagga caagcgccag cggttggcgc ccatcagccg
     2041 cgccagatcg acgaactctt gatcgagctg tttcatgccg gcgtaggtgt taaaaaaatt
     2101 cagaaagaaa accaggatga agacgacgcc gaccttggac cagatgccga tgcctaacca
     2161 gacgatgaac agcggcgcca gcgccgtgcg cggcacgccg tagagcgcga tgatgatggg
     2221 ctcgaagata tcagccaacg ctttgctcct gccgaaaata tagccggtcc agatgccggt
     2281 caaggcgccg atgggaaagc cgatgccgat ctcttgaaag gtcacccagg tattattgat
     2341 cagctcgccg gattgaaagg cctgcaaaaa cgccttccag atcttgctcg ggctgctgat
     2401 caagaacgct tcgacccagc ggcccgaggc gacttcccag agcagaaaaa aaccgacgac
     2461 gacgaagatg cgaatggcgt gaatcatcaa attacggcgc cagccgggct gtgacagagt
     2521 cggcatgcgg cggacttggg attgtcgatc ggtgctcatg tcactattca gttgtcgggt
     2581 tggcgccgtt gttccgcaca ttaagctcat ggcggaaaat attccacagc cgcgcatggg
     2641 cttcgtcaaa accatcttgc cggtggattt cgaaaatatt gcgcggccgg gtcatgggca
     2701 cggtgattac gtcgcgaatt ctcccgggcc ggtgggtcat gactatcaca cggtcggcca
     2761 gcgccacggc ttcgaccaga tcatgggtta cgaagatttt cgatcataaa a
//
LOCUS       DATIRS010001108         3755 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_180885, whole genome shotgun sequence.
ACCESSION   DATIRS010001108 DATIRS010000000
VERSION     DATIRS010001108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3755)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3755)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3755
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180885"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(218..1489)
                     /gene="serS"
                     /locus_tag="VLM90_14130"
     CDS             complement(218..1489)
                     /gene="serS"
                     /locus_tag="VLM90_14130"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: protein motif:HMM:TIGR00414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HSQ14162.1"
                     /translation="MLDVKLLRDDLAQVKERMATRGGAVDWDAFVAIDRERRDALATI
                     ERLKEKKNRLSGEIGKIKKAGGDAGALMRETEAVSEAIRVSEAPLADIEARFEAFMLT
                     VPNLPSPTVKIGKSEQDNREVRRWGEPPKFDFEAKNHWDIGEELAILDFERAAKITGA
                     RFIVYRGAGARLERALINFMLDLHTGENGYQEMLPPALVNRASLIGTGQLPKFEEDLF
                     HLAPGDYFLIPTAEVPLTNLHRDEMLDRSALPIKYVAYTPCFRSEAGSYGKDVRGLIR
                     QHQFNKVEMVKFTEPENSYDELEALVRNAEEVLQRLKLPYRVMELCTGDMGFGAAKTY
                     DLEVWLPGQNTYREISSCSNCEDFQARRANIRYRKDNKSKAIFVHTLNGSGLAVGRTL
                     VAVLENYQQKDGSVIVPAALRPYMGGMERIG"
     gene            complement(1500..1865)
                     /locus_tag="VLM90_14135"
     CDS             complement(1500..1865)
                     /locus_tag="VLM90_14135"
                     /inference="COORDINATES: protein motif:HMM:NF009150.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HSQ14163.1"
                     /translation="MSFFRKRLGQGGEDLAAGFLRKKGYKLVERNYRCKTGEVDLIVL
                     DRKVVVFVEVKTRSDHSFGSPFEAVEARKQRKMIQAAQYFLHERKLHQRDARFDVVGI
                     SWQGDRPVLEHIENAFEVK"
     gene            complement(1893..2549)
                     /locus_tag="VLM90_14140"
     CDS             complement(1893..2549)
                     /locus_tag="VLM90_14140"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: protein motif:HMM:NF000594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HSQ14164.1"
                     /translation="MGFRRFEADALRHGFNAVAGVDEVGRGPLAGPVVAAAVILPHGF
                     THPEIKDSKQLSAKQREKLAPIIQQAAVSWALGIIDVDGIDRLNILRASLTAMAQALH
                     GLTSMPDYVLIDGNQMIPLELFAEFGSIVKQPLYQQTIVKGDQFCLSIAAASIVAKVA
                     RDQIMVDFDKQYPDYGFAGHKGYGSAAHLAALQRYGPTPIHRRSFKPVRDLLAIAQED
                     "
     gene            2704..2991
                     /gene="gatC"
                     /locus_tag="VLM90_14145"
     CDS             2704..2991
                     /gene="gatC"
                     /locus_tag="VLM90_14145"
                     /inference="COORDINATES: protein motif:HMM:NF014716.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HSQ14165.1"
                     /translation="MKLTRESVQRVAILARLRLTADEESEFTGQLDHILAYMDKLNEL
                     DTANVELFNHDIDNSSALRDDKVTNQPNTDALLANAPDRDETFFKVPKIIE"
     gene            2988..>3755
                     /locus_tag="VLM90_14150"
     CDS             2988..>3755
                     /locus_tag="VLM90_14150"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HSQ14166.1"
                     /translation="MNLAALTLHDASEKLRRREISAVELTGAVFQRIDATDDKVHAYL
                     TLDRESAVEQAQRADARRRSEPRASPLLGIPIAVKDNFLTRGLRTTCASKILRDFMPP
                     YDATTIAKLRDLGAVLVGKTNLDEFAMGSSAENSGFFPTRNPWNLERIPGGSSGGSAA
                     AVAADQCIAAVGTDTGGSIRQPAACCGVVGLKPTYGRVSRYGIIAFASSMDQVGPITK
                     DVRDAALLLEALAGHDPADSTSSNRAVPGYNTALDGEV"
BASE COUNT          796 a         1189 c         1006 g          764 t
ORIGIN      
        1 cctttcagcg cagaacagcg caaggaattt cacgattact acgtcgcatc agcgggaaca
       61 tttccggcga tcagtccgag aatcaactcg atgccatgtt tgagccagac cgagcccgaa
      121 ggcagttgac agcagcgcca gcaacttatc cagagttgcc atgagcgaac tgcttcctga
      181 cgggtcgtta aactggcatc gagaaaaact gcgaaaccta accgatccgc tccataccgc
      241 ccatgtacgg ccgtagcgct gcgggaacaa tcacgctgcc gtccttctgc tggtaatttt
      301 ccaacaccgc gaccagcgtg cggccgaccg ctaatccaga gccgttcagc gtgtggacga
      361 agatcgcttt acttttatta tccttacggt agcgaatatt cgcgcggcgc gcttggaaat
      421 cttcgcaatt ggaacaagag ctgatttcac gataggtgtt ttgccctggc agccagactt
      481 caagatcgta ggtcttggcc gcgccaaaac ccatgtcgcc ggtgcacagc tccatgacgc
      541 ggtacggcag ctttaaccgt tgcaaaactt cctcggcgtt gcgcaccagc gcttccaact
      601 cgtcgtaaga attctccggc tcggtgaatt tcaccatctc aaccttgttg aactgatgct
      661 ggcgaatcag accgcgcaca tccttgccat aggaaccggc ttcgctgcgg aaacaaggtg
      721 tgtaggcgac atacttgatc ggcaacgctg agcgatcgag catctcatcg cggtgaaggt
      781 tggtcagcgg tacttcggcg gtggggatga gaaagtaatc ccccggcgcg agatgaaaca
      841 agtcctcttc gaacttcggc aattggccgg tgccgatcaa agacgctcgg ttcaccaacg
      901 ccggcggcag catttcctgg taaccgttct caccggtgtg caggtcgagc ataaaattaa
      961 tcagcgcgcg ctccagcctg gcgccagcgc cgcgatagac gataaaacgc gcgccggtga
     1021 ttttcgccgc acgctcgaag tcgaggatcg ccagttcctc gccgatatcc cagtggttct
     1081 tcgcttcgaa gtcaaacttg ggcggttcgc cccaacggcg cacttcacgg ttgtcctgct
     1141 cgctcttgcc gattttgacc gtcggactcg gcagattggg cacagtcaac atgaacgctt
     1201 caaagcgcgc ttcgatatcg gccaggggcg cctcgctgac gcgaatcgct tcgctgaccg
     1261 cttcggtctc gcgcatcaac gcaccggcat cgccgccggc cttcttaatc ttgccgatct
     1321 cgccggacag gcggtttttc ttttctttca agcgttcgat agtcgccaag gcgtcacgcc
     1381 gttcgcggtc gatggcgacg aaggcatccc aatcgaccgc gccgccgcgg gtcgccatgc
     1441 gctcttttac ttgagcgaga tcgtcgcgca ataattttac atccaacatc aatcgacccc
     1501 tacttcactt caaaagcgtt ttcgatatgc tccagcaccg gacggtcgcc ctgccaagaa
     1561 atgccgacga catcgaacct tgcgtcgcgc tggtgcagtt tgcgctcatg caggaaatac
     1621 tgcgccgcct ggatcatctt gcgctgcttg cgcgcctcca ccgcctcgaa aggtgaaccg
     1681 aagctgtgat ccgagcgggt tttcacctcg acaaagacca ccaccttgcg gtcgagcacg
     1741 atcaagtcca cctcgccggt cttgcagcgg tagttgcgct cgaccagctt gtagcccttc
     1801 ttgcgcagga aaccagcggc gagatcttca cctccctgcc ccagtcgttt gcgaaaaaaa
     1861 ctcacggctg ctgcacccga aaagcgctca agttaatcct cctgagcgat tgccagcaaa
     1921 tcgcgcaccg gcttgaagct gcgccgatgg atcggcgtcg gaccgtaacg ttgcagcgcc
     1981 gccagatgcg ccgcgctacc ataccctttg tggccggcaa aaccatagtc gggatactgt
     2041 ttgtcgaaat cgaccattat ctggtcgcgc gccactttgg cgacaatcga cgccgcggcg
     2101 atggacagac aaaactgatc gcccttgacg atggtctgct ggtacagcgg ctgcttcacg
     2161 atggaaccga actcggcgaa gagctccagc ggaatcatct ggttgccgtc gatcagcaca
     2221 taatccggca tagacgtcag accgtgcagc gcttgcgcca tggcggtcaa gctggcgcgc
     2281 agaatattca agcggtcaat gccatcgacg tcgataatac ccagcgccca actcacggcc
     2341 gcctgttgaa tgatcggcgc caatttctcg cgctgtttgg cgctgagctg cttcgagtct
     2401 ttgatctctg gatgagtgaa accatggggc aatatcaccg ccgccgcgac caccggaccc
     2461 gcgagcggcc cgcggccgac ttcatcgacg ccggccaccg cattgaagcc atgccgcaaa
     2521 gcgtcagctt cgaatcgccg aaaccccaac ccattgctca cacccaagtc acactcggag
     2581 ctgttcatag gtttcagttt tagcccgaac cctcagtaac tgcaaataat tttcgcgtac
     2641 agccccaaca atgacgagcc aagccgagtg gcaatgacga gcaccatatg ttaaaaaatt
     2701 ttcatgaaat tgacccgcga atcggtgcaa cgggtggcaa tcctggcgcg cctccgcctg
     2761 accgcagacg aagaaagcga attcaccggg cagctcgatc atatactggc ctacatggac
     2821 aagctcaacg agctcgacac ggcaaatgtc gagttgttta accatgatat cgacaattca
     2881 tccgccctgc gcgatgacaa ggtaacgaat cagcccaaca ccgatgcgct gctggccaac
     2941 gcgccggatc gggatgagac cttcttcaag gttccgaaaa tcatcgaatg aatcttgccg
     3001 cgctgacact tcacgatgcc agtgagaaac tgcgccgccg cgagatctcg gccgtcgagc
     3061 tcaccggcgc ggtgtttcaa cggattgacg ccaccgacga caaagtccac gcctatctca
     3121 ctttggaccg tgagagcgcc gtcgagcagg cgcagcgagc tgacgcgcgt cggcgcagcg
     3181 agccgcgtgc ttcgccgcta ttgggcatac cgatcgcggt caaagataac tttctcaccc
     3241 gcgggctgcg caccacttgc gcgtcgaaaa ttttgcgcga cttcatgccg ccctacgacg
     3301 ccacgacaat cgctaagctt cgcgacctgg gcgccgtcct cgttggcaag accaatcttg
     3361 acgagttcgc catgggttcc tcggcagaga actcgggatt ttttccgacg cgtaatccgt
     3421 ggaatctcga acgtatcccc ggcggttcct ccggtggctc ggccgccgct gtcgccgccg
     3481 accagtgcat cgccgccgtc ggcaccgaca ccggcggctc gatccgccaa cccgccgctt
     3541 gctgcggcgt ggtcggcttg aaaccgacct acggccgggt cagccgttac ggcatcatcg
     3601 ccttcgcctc gtccatggac caagtcggtc cgatcaccaa agatgtgcgc gatgcggcgc
     3661 tgctgctgga ggcgctcgct ggccacgatc ctgccgattc tacctcgtcg aaccgcgccg
     3721 ttcccggtta caacactgcc ttggatggcg aggtt
//
LOCUS       DATIRS010001109         2717 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1950367, whole genome shotgun sequence.
ACCESSION   DATIRS010001109 DATIRS010000000
VERSION     DATIRS010001109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2717)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2717
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1950367"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            638..1177
                     /locus_tag="VLM90_14155"
     CDS             638..1177
                     /locus_tag="VLM90_14155"
                     /inference="COORDINATES: protein motif:HMM:NF014012.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter subunit E"
                     /protein_id="HSQ14167.1"
                     /translation="MHILRFAALYGFWIVLSGRFQAKYLIIGAVCAATITFLTRDLMR
                     VDGAAAAATVGPHSMIAGMGRFFVYFFWLLWSIVQSTLEVAYIVLQPKMPIQPGLLSL
                     RTKLRNRTGHIILANSITLTPGTITVDFDDGVYSVHALMPGAAQSLLDAKMQSKLERI
                     FGEREEAETDVRWIDRPGG"
     gene            1182..1454
                     /locus_tag="VLM90_14160"
     CDS             1182..1454
                     /locus_tag="VLM90_14160"
                     /inference="COORDINATES: protein motif:HMM:NF015993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015075 - monoatomic ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monovalent cation/H+ antiporter complex subunit
                     F"
                     /protein_id="HSQ14168.1"
                     /translation="MDKFFIGFTLFVALLFGASLYRIAAGPTVFDRTIGAGLIGTNAV
                     LLLVLIGVLYQRVDMFVDLALTYALLNFIGVVALAKYFEHNREANP"
     gene            1451..1759
                     /gene="mnhG"
                     /locus_tag="VLM90_14165"
     CDS             1451..1759
                     /gene="mnhG"
                     /locus_tag="VLM90_14165"
                     /inference="COORDINATES: protein motif:HMM:TIGR01300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0098662 - inorganic cation transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monovalent cation/H(+) antiporter subunit G"
                     /protein_id="HSQ14169.1"
                     /translation="MNWLAATLMVIGGVFLAISCLGLLRLPDFYTRAHAVGKAETLGS
                     MLVLGGLAVHNGADLTSVKILLILAIIFITNPTATHALTRAAFRSGVAIWKNHDGTPR
                     "
     gene            1756..2001
                     /locus_tag="VLM90_14170"
     CDS             1756..2001
                     /locus_tag="VLM90_14170"
                     /inference="COORDINATES: protein motif:HMM:NF024641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase subunit MbhD domain-containing
                     protein"
                     /protein_id="HSQ14170.1"
                     /translation="MIWQVESWLLLVLVFLAVAALSVRDLLGAVVILGAYSFVMALLF
                     ASMGAVDVAFTEATLGAGVSGVLFVVALFITGRRSED"
     gene            2007..2285
                     /gene="mbhE"
                     /locus_tag="VLM90_14175"
     CDS             2007..2285
                     /gene="mbhE"
                     /locus_tag="VLM90_14175"
                     /inference="COORDINATES: protein motif:HMM:NF042818.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogen gas-evolving membrane-bound hydrogenase
                     subunit E"
                     /protein_id="HSQ14171.1"
                     /translation="MTRIILGAFFALFVYAESDLPPSGDPAAPTRRHITPQYIDGAVP
                     QTHTPNIVTAVLADYRSYDTLGETAVILTAGLAVMLILPRATRRGKQS"
     gene            2282..2716
                     /locus_tag="VLM90_14180"
     CDS             2282..2716
                     /locus_tag="VLM90_14180"
                     /inference="COORDINATES: protein motif:HMM:NF015970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MnhB domain-containing protein"
                     /protein_id="HSQ14172.1"
                     /translation="MRERYHNTIVDGVARLIVPFVQLFAFYVISHGHYGPGGGFQGGV
                     ILAAALMLLRLTLGEEEEHRFFSPKTASVLASTGILIYFGVGLLPLFFGGAFLDHAKL
                     PLPGMDGADRRALGILIVESGVGLVVWGTLVIIFDYLIGNEA"
BASE COUNT          487 a          740 c          811 g          679 t
ORIGIN      
        1 gtaagcgaga accggttgtc gacggtcagt tacggcgaag agattccggt ctgccaggac
       61 gcagcggaaa gttgctggca aaagaatcgc cgcgaccgct tcattagatc gaccggcgcc
      121 aaggggacgt tttagccacc ctgtcaattt ttcacctacc tcgaaccaac cctggttagg
      181 gttggttcgc cagacagcta tcgcccaagc gatgacggtt cgcgctgatg gtcgcaccgg
      241 cgtgcgcatt tcaagggttg gcgaccatcg ctctcgcttc ccgtcgcgct gcaacatgct
      301 actccggcgg actggctcga gctgatcacg tttaaacgat attgaattcg tcgtgttggc
      361 ctgtagagtg ctagcgaaca attggcggcg gcgtggcgaa gagtctgtcg cgcatgattc
      421 cgctgatcaa gatgataaat gttttgctac caccaaggaa ttttatatcg gtcttgacga
      481 tggggcagta gaacctgcgc cggacgaacc cgcgcacttt tccgacttga atattcggtg
      541 tgattactgc agcctaagtt gaacttcatc atcatgatgc tgtgcggtcg atgggtgaag
      601 gtcatcgatc aggccagcga gattgggtct cacgaagatg cacattttgc gatttgccgc
      661 actgtatgga ttctggatcg ttctgtcggg gcgctttcaa gccaagtacc taatcatcgg
      721 cgcggtttgc gcggcgacga taacgttttt gacgcgcgac ctcatgcgcg tggacggcgc
      781 cgcagcggcg gcaaccgtcg gaccgcactc gatgattgcc ggcatgggcc gcttcttcgt
      841 gtattttttc tggcttttgt ggagcatcgt gcagtccact ctggaagtcg cctacatcgt
      901 gctccagccg aaaatgccga tacaacccgg cttgctgtcg ttgcgcacta agctgcgcaa
      961 tcgcaccggc catattattt tggccaattc gattacactt actccgggca cgatcaccgt
     1021 ggatttcgac gacggtgttt actcggtaca cgccttgatg ccgggggcgg ctcaaagttt
     1081 actcgacgcc aagatgcaaa gtaagttaga acggattttc ggcgaacgcg aagaggctga
     1141 gaccgatgtt cgctggatcg atcggcccgg aggttgatgt catggataaa tttttcatcg
     1201 gcttcacgct cttcgtggcg cttctgttcg gcgccagctt gtaccgtatc gccgctggcc
     1261 caactgtgtt cgaccgcaca atcggcgcgg gtttgatcgg caccaacgcg gtgttgttgc
     1321 tcgtgctgat tggcgtcttg taccagcgcg tggatatgtt cgtcgatctg gcccttactt
     1381 acgcgttatt aaattttatt ggggtcgttg ccctggcgaa atatttcgag cataaccgcg
     1441 aggctaaccc atgaactggc tggcggcgac gctgatggtc attggcggtg tatttctggc
     1501 gataagctgc ctgggcttat tgcgtttgcc ggatttctat acccgcgccc atgcggtggg
     1561 caaagccgaa actttgggga gtatgctcgt gctcggggga ctggcggtgc ataacggcgc
     1621 ggacctcacc agcgtcaaga ttctcttgat cctggctatt attttcatta ccaacccgac
     1681 ggcgacccac gcgctcacgc gcgccgcctt tcgctcggga gtggctattt ggaaaaacca
     1741 cgacgggacg ccgcgatgat ttggcaagtc gagtcgtggt tgcttttggt gctggtgttt
     1801 ctcgccgtcg cggcgttgtc ggtgcgcgat ttgctgggcg ctgtggtgat tcttggcgcc
     1861 tatagttttg tcatggcgct cttgttcgcc tccatgggcg ccgtcgacgt cgcttttacc
     1921 gaggcgacct tgggcgcagg cgttagcggc gtactgtttg tcgtcgcctt gttcatcacg
     1981 ggacggagat cggaagattg aagttcttga ctcgaatcat cttaggcgca ttcttcgctt
     2041 tgtttgtcta cgccgaaagc gatctgccgc cctcgggcga tcccgcggcg ccgacccggc
     2101 gccatatcac gccgcagtat atcgacggag ccgtgccgca gacccacacg ccgaacatcg
     2161 tcaccgcagt gctggctgac taccgcagtt acgacacctt gggcgaaacc gcggtgattc
     2221 tcaccgcggg gttggccgta atgctgatcc tgccgcgggc cacccgccgg gggaaacaat
     2281 catgagggag cgctaccata acaccatcgt cgacggcgtt gcccggctga tcgtgccgtt
     2341 cgttcagctc tttgcttttt atgtcattag ccacggccac tatggccccg gcggcggttt
     2401 ccagggtgga gtgatcttgg cggcggcgtt gatgctcctg cggctgacac taggcgagga
     2461 agaggaacac cgcttttttt cgccgaagac agcatctgtg ttggccagca ccggcatctt
     2521 gatatacttc ggtgtcgggc tgttgccgct ttttttcggc ggcgcgtttc ttgaccatgc
     2581 caagctaccg ctccccggca tggatggcgc cgatcggcgc gctttgggta ttctcatcgt
     2641 cgaatccggc gtggggttgg tggtgtgggg cacgctggtg attatatttg actacctgat
     2701 tggcaacgaa gcgtaaa
//
LOCUS       DATIRS010001110         1906 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1657385, whole genome shotgun sequence.
ACCESSION   DATIRS010001110 DATIRS010000000
VERSION     DATIRS010001110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1906)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1906)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1906
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1657385"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(149..868)
                     /locus_tag="VLM90_14185"
     CDS             complement(149..868)
                     /locus_tag="VLM90_14185"
                     /inference="COORDINATES: protein motif:HMM:NF016300.4"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HSQ14173.1"
                     /translation="MKPLSIYPIVLLALASAASAQQGPERLRPPSIAVNGEATIAAEP
                     DQAQIDIGVTNQARTAPDASRENAERISRVLAEVKKLLGKGDEVKTSGYSLTPQYRYP
                     QGGKPEIVGYTANNIVRIKTARLDEVGKLIDAAMQAGANNINRLAFTLKDEEGARLDA
                     LKQAAAKAKAKAEAIAASLGLKIVRISSVTEGERSFQPVYRAAPMARADMAVAAAPTP
                     IEQGTVDVRSTVTLVADVSER"
     gene            977..1759
                     /locus_tag="VLM90_14190"
     CDS             977..1759
                     /locus_tag="VLM90_14190"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HSQ14174.1"
                     /translation="MKSFIGVLLLVLITGCSSQPDMLVWRVKDVVLSPIPEVGLAGPD
                     GEIVVTVPTRTIQEMFLAHTRISRTANVQSELYIAAGDEPNTFAGPDATGRNVIGINV
                     GMIKLVGADASVYAALIGHEAAHLAKGHGTSGRQRANTLDLLGTVVGAGLGMAGVPGG
                     GLVSRLAADVIDSVYSRDQEREADALGVDYMLANQYDPQGAIRLHELLVKSSSGLLIP
                     FLSSHPSSDERIANLRGLIAAKKPRAESSPPIPSLDGAAAKQ"
BASE COUNT          345 a          544 c          588 g          429 t
ORIGIN      
        1 tagccctgcg gaaatgccat gtgtgtgatc cggagtcgat accgaaggat ctcgctttcg
       61 taagcggctg gcaagacgag atgcctcgct cggttcggca tgacaacatc tttaaaaccg
      121 tcaatcattg tcccacgcga ttggcagtct accgctcact tacgtccgcc accaaagtca
      181 ccgtcgacct gacgtcgacg gttccctgct cgattggtgt cggcgcggcg gcgaccgcca
      241 tatcggctct tgccatgggc gccgctcggt agaccggttg aaaggagcgt tcgccctcgg
      301 tcaccgagga gattctgacg atctttagtc ccagtgacgc ggcgatggct tcggctttag
      361 ctttcgcttt ggcggcggct tgcttgagag cgtcgaggcg ggcgccttct tcgtctttta
      421 acgtgaacgc cagacggttg atgttgttcg cgccggcctg catggcggcg tcgatcagct
      481 tgccgacttc gtcgagccta gcggtcttga tgcgcacgat gttgttcgcc gtgtagccga
      541 cgatttccgg tttgccgcct tggggatagc ggtattgcgg cgtgagcgag tagccgctgg
      601 ttttcacttc gtctcctttg cccagaagct tttttacttc ggcgaggacg cgggagattc
      661 gctcggcatt ttctcgcgac gcgtccggcg cggtgcgcgc ttggttagtg acgccgatat
      721 cgatctgcgc ctgatcgggt tcggcggcga tggtggcttc gccgttgacc gctatcgacg
      781 gcggtcggag ccgctccggg ccttgctggg ccgaggcggc ggacgccaaa gctagtaata
      841 cgatagggta aatagatagt ggcttcatgt atgatccttt cgccgtggac gatgattcga
      901 acgctgccgc aatctcatct tggccgctgg tcgtggcgcg ggactgcgat atagtcaaaa
      961 attagacgag gcggcgatga aatcgttcat tggagtattg ctacttgtgc tcatcaccgg
     1021 ctgctctagt caacccgata tgctcgtctg gcgggtaaag gacgtcgtcc tgtcgcccat
     1081 ccctgaggtg ggattggcgg ggccggacgg cgagattgtc gtgactgtgc cgactcggac
     1141 gatacaggaa atgtttttgg cgcatacgcg catcagccgg acggccaacg tgcagagcga
     1201 actctacatc gccgccggcg atgagcctaa cacgttcgca ggtccggatg cgaccgggcg
     1261 caacgtcatc ggtatcaacg tcggcatgat caagttggtc ggcgccgatg ccagcgtgta
     1321 cgcggcattg atcggccacg aagcggcgca tttggccaag ggtcatggaa catcgggacg
     1381 gcagcgtgcc aatacgcttg acctgctcgg cacggtagtc ggcgcgggtc taggcatggc
     1441 cggtgtgccg ggcggcggct tagtcagccg acttgccgcc gatgtcatcg attcggtgta
     1501 cagccgcgat caggaacgcg aggccgatgc tctgggcgtc gactatatgc tcgccaatca
     1561 atacgatccc cagggcgcga tccgtttgca tgagttgctg gtcaaatcca gcagcggctt
     1621 gctcataccg tttctttcca gccatccaag cagcgacgag cggattgcga atttgcgtgg
     1681 cttaattgca gcgaaaaagc caagagccga gtcgtcaccg ccgattccct ccctcgatgg
     1741 tgccgctgcc aaacaatagc gccgcaacgt tctgtcattc cgagcgccag cgaggaatct
     1801 cgtctcaacg cgagatctct cacgtcgttc gagatgacac tccatcggat ctttgattga
     1861 ccacaaaaaa ataactgtcg cgcttcccgc cgccggcgga attgct
//
LOCUS       DATIRS010001111         2303 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_968509, whole genome shotgun sequence.
ACCESSION   DATIRS010001111 DATIRS010000000
VERSION     DATIRS010001111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2303
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_968509"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..448
                     /locus_tag="VLM90_14195"
     CDS             <1..448
                     /locus_tag="VLM90_14195"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSQ14175.1"
                     /translation="EIGFGAAEVEVDVETGAVKLLRYISLTDAGKMINPMQCEAQDEG
                     AAVFGIGQALIENLAYHDGQLLNGSLIDYCLPRFTDLPGEFTTTIMEGGGGPGPYGAK
                     GMGEGGILPVAPAIGNALFAATGTRLQSVPLTPDVVWRAITKNGKG"
     gene            497..>2303
                     /locus_tag="VLM90_14200"
     CDS             497..>2303
                     /locus_tag="VLM90_14200"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein"
                     /protein_id="HSQ14176.1"
                     /translation="MESTIQNPKSKIPLAPRIDMRDKVTGAALYVEDLPDPPRTAYGA
                     ALLSPYSHARIRRIDSSEALNMPGVLGVVDRDHLDGVDARLKLALHEHLKGVDDQDFV
                     AIDKVRYDGDLIAVVVAEDLRTAHKALEKIHVDYEPLPSVFDAGLALAPGAPILHETR
                     GSNLLAEDSLTWGDVEEGFRQADRVFEEMYSSPSMFHHPMEPVGGFLAHYLNGEANIW
                     IPTSSPTRDAAEFAHFLGIEPDKVRVRVPYVGGGFGSKIPTPAHFAALFLSRKIGRPV
                     RLIPSAEESFRQNSRHAEVFRAKVGVKADGTLTALDVELIVDTGAYTTGGLTAVHNSV
                     ISAWGCYRLPHLRIRGKGVYTNKVPAGHTRATGKIQTTWGIECTMDSVARQMSIDPYE
                     FRKKNVLLRGDFVCTGTPKMDTDYLDLMADAIAGIAWDGKANPAPSMNGPRWARGRGM
                     ALSLRHGSQGGGRAYALVTLDARGVLTIQHNAPEIGQGTHNLFSVVASQTLNLPQSQI
                     RVRTPDTAVNLPFAGVSAQRTTMQMGNAVHNACKTLQEDLLGLAAQVKGGEAKDWQIV
                     DGRLCWGESSFSINEIIGAVGASVILKAVGYHSVPP"
BASE COUNT          464 a          679 c          710 g          450 t
ORIGIN      
        1 ggagatcggt ttcggcgcgg cggaagtcga agtggacgtc gagaccggcg ccgtgaagtt
       61 gttgcgctac atctcgctca ccgacgccgg caagatgatt aatccgatgc aatgtgaggc
      121 gcaggacgaa ggcgcggctg tgttcggcat cggccaagcg ttgattgaaa atctcgccta
      181 tcacgatggc caactgctca acggcagcct gatcgattat tgcctgccgc gtttcaccga
      241 tctgcccggc gaattcacca ccacgatcat ggaaggcggc ggcgggccag gaccctacgg
      301 cgcaaaagga atgggcgaag gcggcattct tcctgtggca ccggccatcg gcaacgcgct
      361 attcgccgcc accggcactc gattacagtc tgtgccgctg acgccggatg tggtttggcg
      421 ggcgataacg aagaacggta aggggtaagg ggtccgccca actccacact catcgtagaa
      481 tatctgacga agcgtcatgg aatccacaat ccaaaatcca aaatccaaaa ttcccttggc
      541 tccccgcatc gatatgcgcg acaaggtcac gggagcggcg ctttacgtcg aagacctgcc
      601 ggacccgcca cgcacggcat atggcgctgc gttattgagt ccctactcgc acgcgcgtat
      661 tcgccgcatt gactcatcgg aagcgttgaa catgccgggt gtcttgggcg tggtcgatcg
      721 ggatcatctc gacggcgtcg atgcgcgttt gaagctggcg ctacatgagc atttgaaagg
      781 tgttgacgat caggattttg tcgccatcga caaagttcgt tacgacggcg atctgatcgc
      841 cgtggtcgtc gctgaagatc tgcgcacggc ccataaagcg ttggagaaaa ttcacgtcga
      901 ttacgaaccg ctgccctccg tgttcgatgc cggtttagct ctggcacccg gcgcgccgat
      961 attgcatgaa acgcgcggca gcaatctcct cgccgaggat agtctaacct ggggagatgt
     1021 tgaggaaggt tttcgccagg cggatcgcgt tttcgaagag atgtattcgt caccgtcgat
     1081 gtttcaccac ccgatggagc cggtgggcgg ttttctcgcg cactacctca atggcgaggc
     1141 gaatatctgg attccgacca gctcacccac ccgcgacgct gcggagttcg cccactttct
     1201 cggtatcgag cccgacaaag ttcgtgtgcg cgttccctat gtcggcggcg gcttcggctc
     1261 caagatcccg acgccggcgc atttcgctgc gctgtttctc tcgcgcaaga tcggccggcc
     1321 cgtgcgcttg attccttcgg ccgaagaaag tttccgccag aactcacgcc atgccgaagt
     1381 gttcagagcc aaggtgggtg tcaaagccga tggcacgctc actgccctcg atgtcgagct
     1441 gatcgtcgac accggcgctt acaccacggg cggcctgacg gctgtgcaca attcggtgat
     1501 ctccgcctgg ggctgctatc gtctgccgca cctgcgcatc cgcggcaaag gcgtttacac
     1561 gaacaaagtg ccagccggcc atacgcgggc caccggcaag atacaaacga cttgggggat
     1621 tgaatgcacc atggacagcg tggcgcgcca gatgtccatc gatccctatg agtttcgcaa
     1681 gaagaacgtc ctcttgcgcg gtgattttgt ctgcacgggc acgccgaaga tggataccga
     1741 ttatcttgat ctgatggccg atgcgatcgc cggcatcgct tgggacggca aagctaatcc
     1801 cgcgccgagc atgaacgggc cgcgctgggc gcgcggccgc ggcatggcat tgagcctgcg
     1861 ccatggttct caaggcggcg gccgggccta tgcgctggtg acgctggacg cgcggggagt
     1921 ccttacgatc caacacaacg cgccggagat cggccaaggc acgcataatc tattcagcgt
     1981 ggtggcgtca cagaccttga acctgccaca gagccagatt cgcgtgcgca cgccggacac
     2041 cgcggtaaat ttgcccttcg ccggtgtcag cgcccagcgc acgaccatgc agatgggcaa
     2101 cgcggtgcac aacgcctgta agacattgca ggaggatttg ctcgggctgg cggcgcaggt
     2161 caaaggcggc gaagccaaag actggcagat cgtcgacggg cgactgtgct ggggcgagtc
     2221 gagtttttcg atcaacgaaa tcattggcgc ggtgggcgcc agcgtgatct tgaaagcggt
     2281 cggctatcac agcgtgccgc cga
//
LOCUS       DATIRS010001112         2846 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_181001, whole genome shotgun sequence.
ACCESSION   DATIRS010001112 DATIRS010000000
VERSION     DATIRS010001112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2846)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2846)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2846
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181001"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(68..577)
                     /locus_tag="VLM90_14205"
     CDS             complement(68..577)
                     /locus_tag="VLM90_14205"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSQ14177.1"
                     /translation="MADGDNGPALIVDALKTAGVNFVVSLPDVNLSKLLAAIDAQTDL
                     PHVTLCREEEGIGICTGAYIGGRTAAIVMQNGGLLNSCNALTTTALNFNIPLLLLIYY
                     AGDIGDEGFATLGSVTEPVLRGLGIRYFLLRNNDDIPATVKGAVTLAVDARRPVAVLM
                     SKDVLGMRR"
     gene            complement(589..1608)
                     /locus_tag="VLM90_14210"
     CDS             complement(589..1608)
                     /locus_tag="VLM90_14210"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ14178.1"
                     /translation="MVHGMIVWVGLLVSLSAAPVLAQESFYRGKTLRLVVGFSAGGGF
                     DVYSRAISRHIGKHIAGNPAVVVENMTGAGSMVAANHVFRAAKADGLTIGNINGGLFV
                     QQLLGWPGIEFDAAKFEHVGVPVKDKAVCAMTKASGINSYERWAASKTPIKLGATGPG
                     SATHNVPLILKEALGLPIQLVSGYKGIADVRLAAEGGELSGVCGWTWDSLKATWTRAL
                     DGGDVSIVLQTVPQAIAELPKVPLASGLAKSDDAKQLIQAGIHDVADMTYTYVLPPRT
                     PKERADIVRKAFADTMKDPEFLADTKKSRLGIDPLTGEELQRTIARLFKTPAGVVAKL
                     KEVLK"
     gene            1834..2781
                     /locus_tag="VLM90_14215"
     CDS             1834..2781
                     /locus_tag="VLM90_14215"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14179.1"
                     /translation="MTALVALLPAPLPAQEKPGPEKVRIAIATTSMAFLVPFVAKDRG
                     LYLKHGSEVELIVMRPNIAMAALLGGDIDYAELIGSIIRSAARNLPVRAISTSIKAPF
                     FSVIGQNKYKSIKDLKGAVIGLTSIGGTNHVSTRITLRQFGLDIDKDVKILAIGEEKL
                     MVDTFKMGRVDAVVLAPPFSVQLKREGFPVLAQTSDHVVIPFSGLGTTVERIKTNRAQ
                     IKRVLKAEIEALRFIQSNAAGTTEVIRKRFNMDEKLARESYDVVVNSFSRDGRVPLDG
                     VDILLQIEKDAKVIPATVTPQMVVEPSLAEEALKELGVK"
BASE COUNT          615 a          883 c          766 g          582 t
ORIGIN      
        1 ccgaccgtgg taatgaccag cgcatcgccg atctcttccg ccgcgatctt caaacagtcg
       61 taacgtttca tcggcgcatc cccaagacat ctttgctcat taacacggcg actggacggc
      121 gcgcatccac cgccaacgtt actgcacctt tgaccgtcgc cgggatatcg tcgttgttgc
      181 gcagcaaaaa atagcgaatg cccaagccgc gcaataccgg ctcggttacc gaccctagag
      241 tcgcgaaccc ttcatcaccg atgtccccgg cgtagtaaat cagcagcagc agtggaatat
      301 tgaaattgag cgccgtcgtc gtcagcgcgt tacaactatt gagcaagccg ccgttctgca
      361 tgacgattgc cgcggtgcgg ccgccgatgt aggcgccggt gcagatgcca ataccctctt
      421 cctcgcggca cagcgtgaca tggggcaaat ccgtctgcgc gtctatcgcc gccaatagtt
      481 tggacagatt gacatccggc agcgacacga cgaagttgac gcctgccgtt ttcaaggcgt
      541 cgacgatgag cgcggggccg ttatctccat cggccatgga tgccgcgctc atttcagcac
      601 ttctttcagt tttgccacga cgccagcggg tgttttgaag agacgcgcga tggtgcgttg
      661 caattcctcg ccggtcaacg gatcgatgcc gagtcgagat ttcttggtat cggcgaggaa
      721 ctccggatct ttcatcgtgt cggcaaatgc tttgcgcaca atatccgcgc gctccttggg
      781 ggtgcgcggc ggcagcacgt aggtataagt catgtctgcg acatcgtgaa taccggcctg
      841 gatcagctgc ttggcatcgt cagacttcgc caaaccgctc gccagcggaa ctttcggcag
      901 ctcggcaatt gcctgcggca cggtttgtaa aacgatcgaa acatcgccgc catccagcgc
      961 ccgcgtccac gttgccttga gcgaatccca agtccaaccg cagacgccgg acaattcgcc
     1021 accctccgca gccaaacgca catcggcaat gcccttgtaa cccgagacta gttgaattgg
     1081 cagtcccaac gcctctttca gaatcaaagg cacattatgc gttgccgagc ccggcccggt
     1141 ggcgccgagt ttaatcggcg tcttcgacgc ggcccatctt tcgtaactgt tgatcccgct
     1201 cgctttggtc atggcgcaca ccgccttgtc tttgaccggc acgccgacat gttcaaactt
     1261 tgccgcgtcg aactcgatgc ccggccaacc gagtaattgt tggacaaaca aaccgccgtt
     1321 gatgttaccg atggtgagac catctgcttt cgcggcgcgg aatacatgat tggccgcaac
     1381 catgctgcca gccccggtca tgttttcgac caccaccgct gggttgccgg cgatatgttt
     1441 gccgatatgg cgtgaaatcg cgcggctgta gacgtcgaat ccgccgccgg cgctaaatcc
     1501 caccactagc cgcaaagttt tgccgcgata gaaactctct tgcgccaaca ctggcgcggc
     1561 gctcaagctc actaacaggc cgacccaaac aatcataccg tgcaccatga aatcccctcg
     1621 ttcttcgact tttactctgt tggaatatgg ccgcgaaatt atgcgaagca ccgttggctg
     1681 tcaaccaatc gagaccgctg ccgacggaac attgagttgc agtcgccttt gggacatatt
     1741 tgccaaggtc ggcgacgaca atgcgaaaga cgaaacggag ttgaagcaac catgttaaag
     1801 ccagggaaac ggatcgctcg agtgggaatg tttttgactg cgctagtcgc gctcttacct
     1861 gcgcctctcc cggcgcaaga aaaaccagga ccggaaaaag tccgcatcgc catcgccacc
     1921 acgtcgatgg cctttctcgt gccgttcgtc gccaaggatc gcgggctgta tctcaagcat
     1981 ggctcggaag ttgagctgat cgtcatgcgc cccaacatcg ccatggcggc gctgctcggc
     2041 ggcgacatcg attacgctga gctgatcggt tcgatcatcc gctcggcggc gcgcaaccta
     2101 ccggtgcgag cgatttcgac cagcatcaag gcgccgtttt tcagcgtcat cggccagaac
     2161 aaatacaaaa gcatcaaaga cctaaaaggc gcggtcatcg gcctgacctc catcggcggc
     2221 accaaccatg tcagcacccg catcaccctg cgccagttcg gtctcgatat cgacaaggac
     2281 gtcaagatcc tcgctatcgg tgaagagaaa ctgatggtcg acaccttcaa gatgggccgg
     2341 gtcgacgccg tcgtgctggc gccgcccttt tccgtgcaac tcaagcgtga aggctttccg
     2401 gtcctggcgc agacttcgga ccacgtcgtc atcccattct ccggcctggg cacgaccgtc
     2461 gaacgcatta aaactaaccg cgcgcagatc aagcgcgtgc tcaaagccga gatcgaagcg
     2521 ctgcgtttca tccagagcaa cgccgccggc accaccgagg tcatccgcaa acgtttcaac
     2581 atggacgaaa aactcgcccg cgagtcctat gacgtagtgg tgaattcctt cagccgcgac
     2641 ggccgggttc ccctcgacgg cgtcgacatc ctgctgcaaa tcgaaaaaga cgccaaggtg
     2701 atcccagcga ccgtgacacc gcaaatggtt gtcgagccgt cgctggcaga agaggcgttg
     2761 aaagagttgg gagtgaagta ggtagcgatc gcgggataat tcggctgcct cccgtcatag
     2821 tttctcgacc tttacccgca gcttgg
//
LOCUS       DATIRS010001113         1971 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_870676, whole genome shotgun sequence.
ACCESSION   DATIRS010001113 DATIRS010000000
VERSION     DATIRS010001113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1971)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1971)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1971
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_870676"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1379
                     /locus_tag="VLM90_14220"
     CDS             <1..1379
                     /locus_tag="VLM90_14220"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HSQ14180.1"
                     /translation="VEALNSSGPAPANAIIDYFHGRGLKGIPQFGPLSIAVPGAVDGW
                     LELHRKYGTRELGRLTADAIRIAREGFPISLEFAEGIDEISQNFPWVDRCYRQPLGTP
                     KPGKIVVQKGLGEVLEKIALKGRDGFYAGEIADKICTTIKAEGGILAQEDLQNVVCQW
                     LEPLRSTYRDMVVYEQPPVSQGFMVLEMLNIAEAWPMHDGTMSRADVIHYQVAAKKLA
                     FEDRIRYLEDPAFGDPKIAMLISKEHAAKRRELVGEIMNRPGQTVANQSSDTTYLCAT
                     DRDGNAVSFIQSVFAPFGSRVIAGDTGVIMNNRLCSFGLDPEKANSLKPGKRPAHTLN
                     TYMVFRGSEVFATGGSPGADEQPQTNFQIIHDLVDLQMDPQSAVEAPRWSHQPGTPPR
                     DQLPEALRMEEGYDAATLDGLRKKGHKVSVVDRWSFGSAKIIVRDQENGCWLAGADPR
                     RVGYALGY"
     gene            1487..>1971
                     /locus_tag="VLM90_14225"
     CDS             1487..>1971
                     /locus_tag="VLM90_14225"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ14181.1"
                     /translation="MKFSLFTEIQCPQGSSPAARLEEFLDQAELADRLGFATYWVAEI
                     HCQPRFSLLSAPYVVLGAAAQRTKRLRLGVAVNTLPVHHPVQLAEEAAMLDLVSGGRM
                     DFAAGGGHPHSRAYECFGADHKSTHDIMAEGLQIIRKAWSEETLTFAGKFFQIPEIIV
                     NP"
BASE COUNT          411 a          582 c          606 g          372 t
ORIGIN      
        1 aggtcgaggc gctcaattcc agcggtccgg cgccggctaa tgcgatcatc gactattttc
       61 acggccgcgg actaaaaggg ataccgcagt tcggcccgct gagtatcgcc gtgcccggcg
      121 cggtggatgg ctggctggag ctgcacagaa agtacggcac cagggagttg gggcggctga
      181 cggcggacgc gattcgcatt gcgcgcgaag gctttccaat ttccctggag ttcgccgagg
      241 ggatcgatga aatcagccag aattttccgt gggtggatcg ttgctatcgc cagccgctgg
      301 gcacgccgaa gccggggaag attgttgtcc aaaaaggctt gggcgaagtg ctggaaaaaa
      361 tcgcgctcaa agggcgcgac ggtttttatg ccggcgaaat cgccgacaag atttgcacga
      421 cgatcaaggc cgaaggcggg attctagcgc aggaagattt gcagaacgtg gtctgccagt
      481 ggctcgaacc gctgagatcg acctatcgtg acatggtggt ttacgagcag ccaccggtgt
      541 cccagggctt catggtgctc gagatgctca acatcgccga ggcctggcct atgcacgacg
      601 gcacgatgag ccgcgccgac gtgattcatt atcaggtcgc ggcgaaaaaa ctcgccttcg
      661 aagatcgcat tcgttatctc gaagatccgg ccttcggcga tccgaagatc gccatgctga
      721 tatcaaaaga gcatgccgcc aagcggcgcg agctggtcgg cgagatcatg aaccggccgg
      781 ggcaaacggt tgccaaccag agcagcgaca cgacttatct ttgcgccacc gaccgcgacg
      841 gcaacgcggt ctcgttcatt caaagcgtgt ttgcgccctt cggctcgcgt gtgattgccg
      901 gcgacaccgg cgtgatcatg aacaaccgcc tgtgcagctt cggcctcgac ccggagaagg
      961 ccaattcact caagcccggc aagcggccgg cgcacacgct caatacctat atggttttcc
     1021 gcgggagcga ggtgttcgcc accggcggca gtcccggcgc cgatgagcaa ccgcagacca
     1081 attttcaaat catccacgac ctcgtcgatc tgcagatgga cccgcagagc gcggtcgaag
     1141 cgccccgctg gagccatcag ccgggcacgc cgccgcgcga tcagttgcct gaagcgctac
     1201 gcatggaaga aggctacgac gcggcgacac tcgacggctt gcgcaagaag ggtcacaaag
     1261 tttccgtcgt cgatcgctgg tccttcggca gcgccaaaat catcgtgcga gaccaggaga
     1321 acgggtgctg gttggccggc gccgatccgc gcagagtcgg ctacgcgctc ggctactgag
     1381 aatctttcgc atttcggcac aaaaccgctc gcggcttgtt ctcgagcctg tcggttgctc
     1441 attccaaagc tacaggattt aaccagtcaa gaggaatcgg caagcaatga agttcagcct
     1501 atttaccgaa attcaatgtc cgcaaggctc atcgccagcg gcgcggctcg aagagttctt
     1561 ggatcaggcc gagctcgccg accgtttggg attcgccacc tactgggtgg ctgagattca
     1621 ctgccagccg aggttttcac tgctgtctgc accttacgtg gtgctcggtg cggcggcgca
     1681 aagaaccaag cgcctccgcc tcggcgtcgc ggtgaataca ctgccggtgc accatccggt
     1741 gcagctcgcc gaggaagcgg caatgttgga tttggtcagc ggcgggcgca tggacttcgc
     1801 cgccggcggc ggccatccgc acagccgggc ctacgagtgc ttcggcgccg atcataagtc
     1861 cacccacgat atcatggccg aaggcttgca aattatccgt aaagcctggt cggaagaaac
     1921 tttgacgttc gcgggtaagt tctttcagat ccccgagatc atcgtcaatc c
//
LOCUS       DATIRS010001114         1766 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_574828, whole genome shotgun sequence.
ACCESSION   DATIRS010001114 DATIRS010000000
VERSION     DATIRS010001114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1766
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_574828"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..444
                     /locus_tag="VLM90_14230"
     CDS             <1..444
                     /locus_tag="VLM90_14230"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ14182.1"
                     /translation="ARRAADYCDGWMPGRIPTATFNKMVKYLEEQCKLAGRPMVTTGA
                     IPITSIDKNRDVALSKVNTKGLINEGNAPSKKTWVKPKSGTFSTVEDIEGLLMAGTPA
                     DIARDTKRYEEAGLNHIVYDLRFRYADWYQQIDYLGQEVLPAVRA"
     gene            562..1482
                     /locus_tag="VLM90_14235"
     CDS             562..1482
                     /locus_tag="VLM90_14235"
                     /inference="COORDINATES: protein motif:HMM:NF014215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSQ14183.1"
                     /translation="MRTEKVNFYSEGIKLAGVLYLPDGEQGKPYPGIVQGPGFLGLKD
                     AKHYILMFEKLCAAGYACLCFDYRGWGDSEGNDRGWVMPKWQAEDIRSALSFMETRAD
                     IDPDRLATYGSGGTGGGNAVYVAAIDARVKCCVSYLGVSSGREWLHSMRREYEWVDYL
                     KSMEADRKQRALTGKGAIVSAREGGVMVQTPERVTTTIKKDVADKIPDAMPLACAEAI
                     LEYSPIDLVHKISPRGVLFIAVEGDAVTPEQQSFDLYQAAGEPKKLVLYKKTTHYGIY
                     NDYFDDVAANVVDWYNRHLKYHKVEITETK"
     gene            1492..>1766
                     /locus_tag="VLM90_14240"
     CDS             1492..>1766
                     /locus_tag="VLM90_14240"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ14184.1"
                     /translation="MNKISFGVRVPNSGPLSSIENIVKATKAAESMGFDAVWVHDHVV
                     WSSEMHRHHISSGAAEALTDTQDANFFEATTILSYLAAETKKIVLGVA"
BASE COUNT          429 a          509 c          496 g          332 t
ORIGIN      
        1 gcgcgccgcg cagcagacta ctgcgacggc tggatgcccg gacgtattcc cacggcgacg
       61 tttaataaaa tggtcaagta tctcgaagag cagtgcaaac tcgccggtcg cccaatggtt
      121 accaccggcg cgattccgat caccagtatc gataagaatc gagatgtggc attgagcaaa
      181 gtcaacacca agggtctgat caacgaaggc aacgcgccga gcaagaagac ctgggtgaaa
      241 ccgaaatccg gcactttctc taccgttgaa gacatcgaag gcttgctgat ggccggcacc
      301 ccggcggaca tcgcgcgcga taccaagcgc tatgaagagg ccggcctcaa tcatattgtc
      361 tacgacctgc ggttccgcta cgccgattgg tatcagcaga tcgactatct gggccaagaa
      421 gttctgcccg cggttagagc gtaaacccgt tcaaatcgtt caagacgttc aaacagttca
      481 aaacatccga tcagaatccg caaaacggtt tgaacttctt gaacgatttg aactttttga
      541 acgagctttt ggaggtctag aatgcgtacc gaaaaagtaa atttctacag cgaaggcatc
      601 aagctcgccg gcgtgctcta cttgccggat ggcgaacaag gcaagccgta ccccggcatc
      661 gttcagggtc ccggctttct cggcctcaaa gacgccaagc actatatctt gatgttcgag
      721 aagctttgcg ccgccggata cgcctgcctg tgcttcgatt atcgcggctg gggcgatagc
      781 gaaggcaacg accgcggctg ggtcatgccc aaatggcagg cggaagatat ccgtagcgcg
      841 ctcagcttca tggaaacccg cgcggatatc gaccccgacc ggctcgccac ctacggctcc
      901 ggcggcaccg gcggcggcaa cgccgtctac gtcgcggcca tcgatgcccg ggtgaaatgc
      961 tgcgtcagtt acctgggcgt cagcagcggc cgcgagtggc tccactccat gcgccgcgag
     1021 tacgaatggg tcgattactt gaaaagcatg gaggccgacc gcaagcaacg cgcgctaacc
     1081 ggcaaaggtg ctattgtcag cgcccgcgaa ggcggcgtca tggtgcagac cccagagcgc
     1141 gtgaccacta cgatcaagaa agacgtggcc gataaaattc ccgacgccat gccgctcgcc
     1201 tgcgccgagg cgatcctgga atatagtccc atcgatttgg tgcacaagat ttcgccccgc
     1261 ggggtgctct tcatcgccgt cgaaggcgac gcggtgaccc cggaacagca gtccttcgat
     1321 ttataccagg cggcgggtga gccgaagaaa ctggtgcttt ataagaaaac cacccactac
     1381 ggcatttaca acgattattt cgacgatgtc gccgccaatg tggtcgactg gtataaccgc
     1441 cacttgaagt accacaaagt cgaaatcacc gagaccaagt aggagtagaa aatgaacaaa
     1501 atttcctttg gcgtgcgcgt gcccaactcg ggaccgctgt cgagcatcga gaacatcgtt
     1561 aaagcgacca aggcggccga aagcatgggc ttcgacgccg tctgggtgca tgaccatgtg
     1621 gtgtggagtt cggaaatgca ccgccatcat atttcgtccg gcgccgccga agcgctgacc
     1681 gacacacaag atgccaattt cttcgaagcg acgacgatac tgtcctactt ggcggcggag
     1741 accaaaaaaa tcgtcctcgg cgtggc
//
LOCUS       DATIRS010001115         2735 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_968810, whole genome shotgun sequence.
ACCESSION   DATIRS010001115 DATIRS010000000
VERSION     DATIRS010001115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2735
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_968810"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..545)
                     /locus_tag="VLM90_14245"
     CDS             complement(<1..545)
                     /locus_tag="VLM90_14245"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSQ14185.1"
                     /translation="MLPFLTQVHATLQAQARLWAEKNLFAGHGSEDLERHARTLVKQL
                     GVAGFLEHAVSKQFGGVREQVEARDLCILREELARGDALADTMFALQALGSYPITLAG
                     NAAQKQNYLSQVVSGDAIAAFAITEPEAGSDVAALQTTALRQGEQFALYGTKRFISNA
                     GIADFYVVFASTEPEKKAKGV"
     gene            complement(635..1414)
                     /locus_tag="VLM90_14250"
     CDS             complement(635..1414)
                     /locus_tag="VLM90_14250"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ14186.1"
                     /translation="MNDLTDKIVLVTGGSGGIGAAIAGQFATLGCRVAIAARDHKKLA
                     TTAEKLAENGAQVRAIACDVTRREEVQRLRIAIQELWGDVQILVNNAGIASAVSFADM
                     SDATWDRTLDTNLTGAYNCCKVFLPAMIETNWGRIVNIASTAAKVGYSHVTAYTASKH
                     GLLGLTRSLALETARQGVTVNAICPGYVDDERTRENARIMAEKTGKSGDDILKIFAAS
                     APQNRLIEATEVAALACLIASSQMSGMTGQAINVDGGAVMS"
     gene            1532..2593
                     /locus_tag="VLM90_14255"
     CDS             1532..2593
                     /locus_tag="VLM90_14255"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HSQ14187.1"
                     /translation="MHYLIIGLLLASMCFPAALGAETNTDKSSLVNWREAQPPTSESD
                     LDRLNRAFVHLAKTSRPAIVQIRVSGSDNSPTQGNRGSGFFIDPEGYILTAQHVIDKA
                     KEIEVRTADGQRLAARLVVADSQLDLALLKIQSERSAPVLRFGDSERIQVGDLAIVFS
                     YPFGRESSMSLGIISRAGRTYPDSAGYDFVQTDAGAYPGVSGGPLLNSQGDVVGMITM
                     ASERGNLGFATPINLIKKILPRLVKGERFAWGWLGVQMSDITLGQARSLGIYPAKGVV
                     VSSVLPGQPAARMGVQKQDVIVAVNDTQVDSPREVTRMVGGLEAGRMVQLSILRKGKS
                     IHLTVPLGIKPESAKPREG"
BASE COUNT          533 a          829 c          801 g          572 t
ORIGIN      
        1 ctcacgcctt ttgctttctt ctccggctca gtcgacgcga agaccacgta gaagtctgcg
       61 atgccggcgt tggagataaa tcgcttggtg ccgtatagag cgaattgttc gccctggcgc
      121 agcgcggttg tttgtagcgc agcgacgtcg gaacccgcct ccggttcggt gatcgcaaac
      181 gcagcgatcg cgtcgccgct gacaacctgc gacaaatagt tttgtttttg tgcggcgttt
      241 cccgccagcg taatcggata gctgcccagc gcctgcaacg cgaacatagt atcggcgagc
      301 gcatcgccgc gcgccagctc ttcgcgcagg atgcaaagat cgcgcgcttc gacttgctca
      361 cgaacgccgc cgaactgctt cgacacggca tgctcgagga agcccgccac gcccagttgc
      421 ttaaccaagg tcctggcgtg ccgctctaga tcttcactgc catggccggc gaacagattc
      481 ttctccgccc acaagcgagc ttgcgcctgc aatgtggcat gaacttgagt caaaaaaggc
      541 aacatcgaga aactctaact agaattgatt gaacttcgcc ggccgcttct cggcaaacgc
      601 ccgatagcct tctttgaagt ccggcgcatt tccgtcagct catcaccgcg ccgccgtcga
      661 cattgatcgc ctgcccggtc atgccgctca tttgcgacga agcgatcaaa catgccagcg
      721 ccgcaacttc cgtggcttcg atcaatcggt tctgcggcgc gctggcggcg aagattttta
      781 aaatatcgtc gccgctcttg ccggtcttct cggccatgat gcgcgcgttc tcgcgggtgc
      841 gttcgtcgtc gacatagccc ggacaaatcg cattcacggt cacgccctgg cgcgcggttt
      901 ccagcgctaa cgaccgggtc agtccgagca gcccatgctt cgacgcggtg taggcggtca
      961 catggctgta gccgactttg gccgcggtcg aagcgatgtt gacgatgcgg ccccaattgg
     1021 tttcgatcat cgccggtaaa aatactttac agcaattgta agcgccggtc agattggtat
     1081 ccaaggttcg gtcccaggtt gcatcggaca tgtcggcaaa gctgacagcg ctggcgatgc
     1141 cggcgttgtt gaccaagatc tgcacgtcgc cccacagttc ttgaatcgca atccgcagcc
     1201 gctgcacctc ctcgcggcgc gtcacgtcac aggcaatcgc gcggacttgt gcgccattct
     1261 cagcaagttt ttccgccgtt gtcgcaagtt tcttgtgatc gcgggctgcg atcgctaccc
     1321 ggcagccgag cgtggcgaac tgcccggcga tggcggcacc gatgccgccg ctgccgccgg
     1381 tgaccagaac gattttgtcg gtgaggtcgt tcatacttga accatagcat atgctctggc
     1441 gtgaaacgca agaccaaccg ctttggcgct tgtgctcgcc ggaggatttc gataaaggga
     1501 ctgccagcca gactcgctga gaggtggatt cgtgcactat ctaatcattg gactgctact
     1561 cgcttcaatg tgctttccag ccgcgctggg ggcggagaca aacactgata aatcgtcact
     1621 ggttaactgg cgcgaagcac agccgccaac tagcgagagc gacctcgacc ggctcaatcg
     1681 cgcctttgtt catttggcga aaacttcccg cccggcgatc gtgcagattc gcgtcagcgg
     1741 ttcagacaat agcccaaccc aaggcaaccg cggctcgggc tttttcatcg atccggaagg
     1801 ctacatcctg acggcgcagc atgtcatcga caaggccaag gagattgaag tccgcaccgc
     1861 cgatggccag cgtctggcgg cgcgcttggt cgtcgccgac agtcagctcg acctggcgct
     1921 gttgaagatt caaagcgagc ggtcagcgcc ggtgctgcgc ttcggcgatt ccgagcgcat
     1981 tcaggtcggc gacttggcga ttgtcttcag ctacccgttt ggccgtgaga gttccatgag
     2041 cctcggcatc atcagccgcg ccgggcgcac ctatcccgac tcggcgggtt acgatttcgt
     2101 tcaaaccgat gccggcgcct atcccggcgt cagcggcggg ccgctgttga atagccaggg
     2161 cgatgtcgtc ggcatgatca ccatggcctc cgaacgcggc aatctcggct tcgccacgcc
     2221 gatcaattta atcaaaaaaa ttctgccccg cttggtcaaa ggtgagaggt tcgcctgggg
     2281 ctggcttggc gtgcaaatgt cggacatcac tctgggccag gcgagatcat taggaattta
     2341 tcccgctaaa ggcgtggtgg tgagctcggt tttaccgggg caaccggcgg cgcggatggg
     2401 cgtgcaaaaa caggatgtca tcgtcgcggt caacgacact caagtcgata gcccgcgcga
     2461 ggtgactcgc atggtcggcg gcctggaagc cggccgcatg gtgcaacttt caatactacg
     2521 caaaggcaag tcgattcact tgaccgtgcc cctcggtatc aagcccgagt cggccaagcc
     2581 gcgcgaaggt tagcgcagac tgctgaacga tcctcggcgg cacgccgagg gattctgagc
     2641 ttgtcaacta gaagtccact cgcgattccg tcatccgttg aaaaacggta tccaggtttg
     2701 gcggagggga tggatgccgc ttgcgccggc atgac
//
LOCUS       DATIRS010001116         4304 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1950695, whole genome shotgun sequence.
ACCESSION   DATIRS010001116 DATIRS010000000
VERSION     DATIRS010001116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4304)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4304)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4304
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1950695"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..599)
                     /locus_tag="VLM90_14260"
     CDS             complement(<1..599)
                     /locus_tag="VLM90_14260"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HSQ14188.1"
                     /translation="MARAQEPSRLVADLSSVPGVRLKLDEPLARYTSMKIGGPADYFI
                     EADHGAALAAVLIALRRHRVPLCLLGNGSNVLVSDRGVRGAVIHLTGEFKKIEWREVG
                     ENIAVEVGAAYAVTQLVRQAARKGYAGLEFAEGIPGSVGGALVMNAGAYGSEIEKVVE
                     RVDAITHDGQALVFSRAEMTFSYRDSHLPAGTVVTGVVLR"
     gene            complement(685..2070)
                     /gene="murC"
                     /locus_tag="VLM90_14265"
     CDS             complement(685..2070)
                     /gene="murC"
                     /locus_tag="VLM90_14265"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR01082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HSQ14189.1"
                     /translation="MLQKKHKIHFVGIGGIGMSGIAEVLLNSGYAVSGSDLQASEATR
                     RLSSLGAQIFVGHQEANIAGNPSVVVISTAVKYANPEVLEARRRHIPVIPRAEMLAEL
                     MRMKFGVAVAGSHGKTTTTSMVSAVLSAAGLDPTMVIGGRLHMLGSNAKLGAGDIMVA
                     EADESDGSFLLLAPTIAVVTNIDKEHMDFHGTMERLSENFLTFINKVPFYGVAVLCSD
                     DAHVRALLPKVRKRFTTYGLSPEAEFSAEDLTMSPAGVTFTALHRGKSLGKVRLRSPG
                     KHSATNSLAAIAVAHELEVPFAHVAQAFEAFSGIHRRFEIIGEPNGVMVIDDYGHHPS
                     EIRATIGAIRDSWKRPLTVIFQPHRYTRTRDLFDEFLTAFEGADQLVLTEIYGAGEDP
                     ITGATGEALYQALKRQGHLEVEYVADKSQIVAHLAGRLQAGDMALTLGAGDIYKVGEA
                     LVEALKSEGLE"
     gene            complement(2095..3162)
                     /gene="murG"
                     /locus_tag="VLM90_14270"
     CDS             complement(2095..3162)
                     /gene="murG"
                     /locus_tag="VLM90_14270"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: protein motif:HMM:TIGR01133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050511 -
                     undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HSQ14190.1"
                     /translation="MRVILAGGGTGGHLFPGLAVAREFQRRDGQTEIVFIGTEQGIEF
                     RVLPKEGFKLETLTVKGIKGRGIRGILDALYGVPAALLRSLAILRAFRPDCVIGLGGY
                     ASGPVLLAAQLKRIRCAIMEQNLRPGFTNKLLARWVDRVFTAYRESAEYFPGAQVIET
                     GNPVRWTHVPQVKRSDKFTLLIFGGSAGARRINYAVVDALKLLGDLNSAIAITHQTGP
                     LDYDAIKQAYGALPFEAAVTPFIERMDEAYAGADLVLCRAGAMTIAELTVFGKAAILV
                     PYPYAIYDHQRANAESLQERGAAEMILDRDFTGDVLAARIRGYFADRARLERMAAAAR
                     ALGRPDAAARIVDACYGLAQA"
     gene            complement(3164..4258)
                     /gene="ftsW"
                     /locus_tag="VLM90_14275"
     CDS             complement(3164..4258)
                     /gene="ftsW"
                     /locus_tag="VLM90_14275"
                     /inference="COORDINATES: protein motif:HMM:TIGR02614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HSQ14191.1"
                     /translation="MRDVLAVDKWILLAVIGLLAVGVIMVLSTSYLYSQERYADGTFF
                     FRKQLFAMGGGVIALIVCSLIPSHQYRRFAYPLLALTLLALILVLIPGIGANRGGARR
                     WIALAGFAFQPSELAKLAMVVYLAHSIAKKEPVIGTFSIGVLPHMIVTGVFAGVLLLE
                     PDFGSALILTMLLYSMLFIGGVRVHHLLSTGLLALPLLIYVMTQADYRMRRLTCFMDP
                     WSDASGCGFHVIQSLIAFGSGQLWGRGLGESRQKLFYLPEAHTDFVYSVIGEELGLLG
                     AFAVLALFGVIILRGLRLTSRIEEPFDQYLAFGLTVLLGLQGLIHMGVVMGLMPTKGL
                     VLPFISYGGSAMLINLAEAGILLSLSRRRV"
BASE COUNT          935 a         1386 c         1226 g          757 t
ORIGIN      
        1 cgtagcacta cgcccgtcac caccgtgccc gcgggtagat gcgaatcgcg ataactaaac
       61 gtcatctccg ctcgggagaa aaccagcgcc tggccgtcat gagtgatcgc gtcaacgcgc
      121 tcgacgactt tttcgatctc ggaaccgtag gcccccgcgt tcatcaccag cgcgccgccg
      181 acgctgccgg gaatcccctc ggcgaattcc agaccggcgt atcccttgcg cgccgcctgg
      241 cgcaccagct gggtgacggc gtaggccgcg ccaacttcga ctgcgatatt ttcgccaacc
      301 tcgcgccatt cgatcttttt gaactcaccg gttaaatgaa tcaccgcgcc gcgcacgccg
      361 cggtcgctga ccaggacatt gctgccattg cccaggagac ataacggcac ccgatggcgg
      421 cgcagcgcga tgagcaccgc ggccagcgcc gcgccatggt cggcttcgat aaaataatcc
      481 gccggcccgc cgatcttcat cgaggtatag cgcgccagtg gctcatcgag cttgagtcgc
      541 acgcccggga ccgacgagag gtcagccacc aaccgtgaag gttcctgtgc tcttgccatc
      601 gcaataatcg gttgtgagcg ggagtaaagg agtgatggag tactggagta gtgtcccctc
      661 cccacccatt gctcgatcac tccattactc caatccctca ctcttcagcg cctcaaccag
      721 ggcttcgccg actttgtaaa tatcgccggc gcccaaggtc agcgccatat cgccggcctg
      781 cagccggccg gcgaggtgcg cgacgatttg gcttttgtcg gcgacatact cgacctctaa
      841 atgaccctgg cgtttgagcg cctggtataa cgcctcgccg gtggcgccgg tgatcggatc
      901 ttcgccggcg ccgtaaattt ccgtcagcac tagctggtcc gcgccttcga acgcggtcaa
      961 gaactcgtcg aacagatcgc gtgtacgggt atagcggtgc ggctggaaga ttaccgtcaa
     1021 cggccgcttc caactgtcgc gaatggcgcc gatggtggcg cgaatctctg acgggtgatg
     1081 gccataatcg tcgatcacca tcacgccgtt gggctcgccg attatttcaa aacggcgatg
     1141 aataccgctg aaggcttcga aggcctgggc gacatgggcg aacggcactt ccagttcatg
     1201 ggccaccgca atcgcggcca gcgaattggt cgcgctatgt ttccccggcg agcgcagacg
     1261 cactttgccc agtgacttgc cgcgatggag cgcggtgaag gtcacgccgg cgggactcat
     1321 ggtcaaatcc tcggcggaga actccgcttc cggcgacagg ccataggtcg tgaaacgctt
     1381 gcgcaccttg ggcaacagag cgcgcacatg ggcatcgtcg ctgcacaaca ccgcgacccc
     1441 gtagaacggc actttgttga tgaaggtgag aaagttttcg ctcaaccgct ccatggtgcc
     1501 gtgaaaatcc atgtgctctt tgtcgatatt ggtcaccacc gcgatggtcg gcgcgagcaa
     1561 cagaaaactg ccgtcgcttt cgtcggcttc ggcaaccatg atatcgcccg cgccgagctt
     1621 ggcgttgctg ccgagcatat gcagccggcc gccgatcacc atggtcgggt ccaagccggc
     1681 tgcgctcagc accgccgaaa ccatcgacgt ggtagtggtc ttgccgtggc tgccggccac
     1741 ggcgacgccg aacttcatgc gcattagctc ggccagcatt tcggcgcgcg ggatcaccgg
     1801 gatatggcgc cggcgcgctt ccaagacttc cggattggca tacttaaccg ccgtcgagat
     1861 taccaccacc gacggattac cggcgatgtt cgcttcctga tggccgacaa aaatctgtgc
     1921 accgagagaa ctcagacgcc gcgtcgcctc gctggcctgc aagtccgagc cgctcaccgc
     1981 atagcccgag ttgagcaaca cttcggcgat gccgctcatg ccgatgccgc caatgccgac
     2041 gaagtgaatt ttatgtttct tctgcaacat gaaactttcg cgaccattac caatctacgc
     2101 ctgcgccaag ccgtaacagg catcgacaat ccgcgccgcg gcatctggcc ggcccaaggc
     2161 gcgcgccgcc gccgccatgc gctcaagccg cgcccgatcg gcgaaatagc cgcgaatccg
     2221 cgcggccaag acatccccgg tgaaatcgcg atccaaaatc atttccgccg cgccgcgctc
     2281 ttgcagcgat tcggcgttag cgcgctggtg atcgtaaatg gcatacggat aaggcaccaa
     2341 aatcgccgcc ttgccgaata ccgtcaactc ggcgatggtc atcgccccgg cgcggcacag
     2401 caccaagtcg gcgccggcat aggcttcgtc catgcgctcg ataaacggcg ttaccgccgc
     2461 ttcgaatggc agcgcgccgt aagcttgttt gatcgcgtcg taatccaacg gtccggtttg
     2521 gtgcgtgatg gcgatggcgc tgttaagatc gccgagtaat ttcaatgcgt cgacgacggc
     2581 ataattgatc cgccgggcgc cggcgctgcc gccgaaaatc agcagcgtga atttatcgct
     2641 gcgcttcacc tgcggcacat gagtccagcg caccgggttg ccagtctcga tcacctgcgc
     2701 gccgggaaaa tactcggcgc tctcacggta ggcggtaaag actcgatcga cccagcgggc
     2761 gagcagctta ttggtgaaac ccggccgcag attctgctcc atgatggcgc agcgaatgcg
     2821 tttgagttgg gccgccagca acaccggccc ggacgcataa ccgccgagcc caatcacgca
     2881 gtccgggcga aaggcgcgca ggatcgccag cgaacgcagc agcgccgccg gcacgccgta
     2941 gagcgcgtca agaatgccgc ggataccgcg cccctttatc cctttgaccg tgagcgtttc
     3001 cagtttgaat ccttccttcg gtaatacgcg aaattcgatg ccctgctcgg taccgataaa
     3061 aactatttcc gtctggccat cgcggcgctg aaactcccgc gccaccgcta gaccgggaaa
     3121 caggtggccg ccggttccgc cgccggctaa aattacccgc atgctaaact ctccggcgcg
     3181 acaggctgag caagatgccc gcctccgcca gattgatcaa catggccgag ccgccataac
     3241 tgatgaacgg cagcaccagt cccttggtcg gcatgagccc catcaccaca cccatgtgaa
     3301 tcaaaccctg gagccctaag agcaccgtca agccgaaagc caaatactga tcgaacggct
     3361 cctcgatgcg cgaggtcagc cgcaggccgc gcaaaataat cacgccgaac agcgccaaca
     3421 ccgcaaacgc gccgagcagc cccaactcct cgccgatcac agagtaaacg aaatcggtgt
     3481 gcgcttcggg tagataaaat aacttctgcc ggctctcgcc caagccgcgc ccccacaact
     3541 gtccggaacc gaaagcgatc aacgattgaa tgacgtgaaa gccgcagccc gacgcatcgc
     3601 tccacgggtc catgaaacac gtcaagcggc gcatccggta gtccgcctgg gtcatgacgt
     3661 aaatcagcaa gggcaaggct aacaggccgg tgctgagcaa atggtgcacg cgcacgccgc
     3721 cgataaacaa catcgagtag agcagcatgg tcaggatcag agcgctgccg aaatcaggtt
     3781 cgagcaatag cactccggcg aagaccccgg tgacgatcat gtgcggcaag acgccgatcg
     3841 agaaggtgcc gattaccggc tctttcttgg cgatggaatg ggcgagatag acgaccatcg
     3901 ccaacttggc caactccgac ggttgaaagg caaagccagc cagagcgatc caacgccggg
     3961 cgccgccgcg attggcgccg atgccgggaa tcagcacgag aatcaacgcc agcagggtca
     4021 gcgccaacaa cggataagcg aagcggcggt attgatgcga tggaatcagc gaacaaacga
     4081 tcaaggcgat cacgccgcca cccatggcaa acaattgttt gcggaaaaag aacgtgccgt
     4141 cggcgtagcg ttcttgggaa tagagataac tggtgctcaa caccatgatc acacccacgg
     4201 cgagcaagcc gatgacggcc aagagaatcc atttatcgac ggccagcacg tccctcatag
     4261 agcctgcacc aaatttttaa aggtccggcc gcgctcggcg taat
//
LOCUS       DATIRS010001117         2066 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_83580, whole genome shotgun sequence.
ACCESSION   DATIRS010001117 DATIRS010000000
VERSION     DATIRS010001117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2066
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83580"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..726
                     /locus_tag="VLM90_14280"
     CDS             <1..726
                     /locus_tag="VLM90_14280"
                     /inference="COORDINATES: protein motif:HMM:NF019040.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1501 domain-containing protein"
                     /protein_id="HSQ14192.1"
                     /translation="AQLPRMLAGRAPALTLSSIEEFRFRNEALGTALQKLYANTRDSE
                     LRFGAESLFGAMTELKRLDAKIPLSAERYPAGRFGTGLAQIARLIKADVGLELAFTEI
                     GGWDTHANEGGATGQLANRLKELGEGLAAFYRDLGDRMDDVVLLTMSEFGRTARENGN
                     RGTDHGHANVMFAIGGKVRGGKVYGRWPGLAPEMLNEGRDLALTTDFRTVCGEVLTRH
                     LGQKDMSKIFPGFSASTKLGLLT"
     gene            complement(752..>2066)
                     /locus_tag="VLM90_14285"
     CDS             complement(752..>2066)
                     /locus_tag="VLM90_14285"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ14193.1"
                     /translation="LWLNWQLALVCLAAFPVIIFLSRFYRRRAREVYRQSRLILGRLN
                     AGLQENIAGVATVQAFGQEERMYRRFQQINLNYRDVLLQSIRNNAVFFPVIEVFSAIS
                     VGLLLWYGGFQVLDHAVEAGVLVAFLQYIQRMYQPIRDLAEKYNIMQAAMASSERIFL
                     LLDQPETVKNPGQPKRAEKFAGAVEFKNVQLSYQPGDPVLRNISFRVRPGEKIALVGA
                     TGGGKTSIISALCRFYDVDSGQILVDGIDVREWNKQVLRRHLGLVLQDVFLFSGDIAT
                     NITLGDPRISEQTMVEAAARAQITRFIDKLPKRFHEDVQERGSTLSQGQRQLLSFARA
                     LAFDPKILILDEATSSVDTHTEGLIQAALNELLKNRTALIVAHRLSTIKHADRILVIH
                     NGEIREEGNHEELLARGGLYARLYDLQYRFQERDAAVTAATVAQE"
BASE COUNT          442 a          617 c          603 g          404 t
ORIGIN      
        1 gcgcagctgc cgcgcatgtt ggccggccgc gcaccggcac ttacgctgtc gtccattgag
       61 gagtttcgct tccgcaatga agctttgggc acggctttgc agaaactcta cgccaacacc
      121 cgggacagcg aactccgctt cggcgccgag agtctctttg gcgcgatgac cgagctcaaa
      181 cgactcgatg ccaaaatacc gctctcggcg gaacgctacc cggcgggtcg atttggcaca
      241 ggtctggcgc agatcgcccg cttgatcaaa gccgatgtcg gtttggaact cgctttcact
      301 gaaatcggcg gctgggacac ccacgccaac gaaggtggcg ccaccggcca gctggccaac
      361 cggctgaaag aattgggtga agggctcgcg gcgttttacc gcgacctcgg cgaccggatg
      421 gacgatgtcg tcctgctgac gatgtccgag tttggccgca ccgcgcggga gaatggcaat
      481 cgcggcaccg accacggcca cgccaacgtg atgttcgcca tcggtggcaa agtgcgcggc
      541 ggcaaagtct acggccgttg gcccggcctg gcgccggaaa tgcttaatga aggcagagac
      601 ctcgctctaa ccacggactt ccgcacggtc tgcggcgaag tgctgacacg ccatcttggc
      661 cagaaagaca tgagcaaaat tttcccaggt tttagcgcga gcacaaaatt gggactacta
      721 acttaggagc gcaagatctt gcgccctttc gtcactcctg tgcgaccgtg gcagccgtaa
      781 ccgccgcgtc tcgttcctga aaacgatact gcaaatcgta taagcgcgcg tacaagccgc
      841 cgcgcgccaa caactcctcg tgattgccct cttccctgat ctcaccgttg tgaatgacga
      901 gaatccggtc ggcgtgtttg atcgtcgaca agcggtgcgc gacgatcagt gccgtgcgat
      961 ttttcagtag ttcattgagc gctgcttgga tcaacccttc agtgtgagta tccaccgagc
     1021 tggtcgcctc atcgagaatg agaattttcg ggtcgaaggc gagcgctctg gcgaaagaca
     1081 ataactggcg ctggccctgc gacaaagtcg aaccgcgctc ttggacgtct tcatggaaac
     1141 gtttgggcag cttgtcgatg aaccgggtga tctgcgcccg tgccgccgct tcgaccatgg
     1201 tctgttcgct aatccgcggg tcacccaagg taatgttggt cgcgatgtcg ccggaaaaga
     1261 gaaacacatc ctgcaacacc agacctaaat ggcggcgcag cacctgcttg ttccactccc
     1321 ggacatcgat cccgtcgacg agaatctgcc cgctgtcgac atcgtagaag cggcagaggg
     1381 cggagatgat cgaagtcttg ccgccgccgg tggcgcccac cagtgcgatt ttttcgcccg
     1441 gccgcacccg aaaagaaata tttcttagca ccggatcgcc cggctggtag gagagctgga
     1501 cgtttttgaa ttcgaccgca ccggcgaact tttcagcgcg cttgggttgt cctgggttct
     1561 tgaccgtctc cggttgatcg agcaagagaa aaatccgttc cgacgaggcc atggcggctt
     1621 gcatgatgtt gtatttctcc gccaagtcgc ggatcggttg gtacatccgc tgaatgtact
     1681 ggaggaacgc caccagcacg ccggcttcga cggcatggtc caaaacctga aatccgccgt
     1741 accagagcag caaaccgacg gaaatcgcgc tgaacacttc gatgaccgga aagaacacgg
     1801 cgttgttgcg aatgctctgc aacaagacat cgcgatagtt gagattgatc tgttgaaagc
     1861 gccggtacat ccgctcctcc tgcccaaagg cttgcaccgt cgccacgccg gcgatgtttt
     1921 cctgcaagcc ggcgttgagc cggccaagaa tcagccggct ctggcgatag acctcgcggg
     1981 cacgccggcg atagaagcgg ctgagaaaaa taatcaccgg aaacgccgcc aggcagacca
     2041 gcgccagttg ccagttgagc caaagc
//
LOCUS       DATIRS010001118         2357 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_379316, whole genome shotgun sequence.
ACCESSION   DATIRS010001118 DATIRS010000000
VERSION     DATIRS010001118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2357)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2357)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2357
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_379316"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..392)
                     /locus_tag="VLM90_14290"
     CDS             complement(<1..392)
                     /locus_tag="VLM90_14290"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HSQ14194.1"
                     /translation="MDFIGASLDTGCGDDLATMSLTILKKDLGVGLQLLAEILTGASF
                     PPAEIDRQKQAIIASIKAKAEDPGTVAGDVFAAALLPGSAYGRPVEGTEASVKRLDRQ
                     RVQEFFKRYYRPNRTIMSVVGDVSEQEI"
     gene            complement(417..665)
                     /locus_tag="VLM90_14295"
     CDS             complement(417..665)
                     /locus_tag="VLM90_14295"
                     /inference="COORDINATES: protein motif:HMM:NF012879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HSQ14195.1"
                     /translation="MMRGLIGLFLFSLLAQGMPAHAAMVPKRTVLANGLVLLTSEQRA
                     LPTVAIELLIDAGARHESAEHTGLAHLTSQLLTDGTAK"
     gene            complement(665..1987)
                     /locus_tag="VLM90_14300"
     CDS             complement(665..1987)
                     /locus_tag="VLM90_14300"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HSQ14196.1"
                     /translation="MLWLRRITLLVVLLAISFPAASSAAQVQEFILDNGLKVLLLEDH
                     KSPAVTFQVWYRVGGRNEKDGKSGLAHFLEHMLFKGTPTTAPEEYSRIIAKNGGRSNA
                     FTSSDMTVYFATMSRDKIHIQLELEADRMANALLGDTYFEPEKKVIQEERRLRTDDNP
                     GSALYEIAASVAYTIHPYRRPVVGWMEDIQSLTRQDLVDFYKLYYAPNNAVIVMVGDF
                     DSYEMLAKIKAAYGKIPRGSEPPKLTLVEPSQRGEKRVTLKKEAELPMLMLFHHAPNL
                     HSPDSFALDLLSIVLAGGKSSRLYQELVYQKRLVRGIDADYSAVSMDATGFSISAQLL
                     PGAELVNVEQQIDRSLDKVKAALVSERELQKAKNQIEAAFIFAQDSIFGQAMKVGYYE
                     MVGGWRLVDSYLDNMRKVTREDLRRVAQKYLQRDNRTVGTLIPTKANN"
     gene            complement(2087..>2357)
                     /locus_tag="VLM90_14305"
     CDS             complement(2087..>2357)
                     /locus_tag="VLM90_14305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14197.1"
                     /translation="FGISARGGTAVLTQIMLAHYFGRRSFGAISGVLEPFHKGGLGLG
                     ALVAGAAFDWSGNYRAALLFFLTSYLLSALLVFFARRPEADGVLE"
BASE COUNT          528 a          699 c          639 g          491 t
ORIGIN      
        1 ctaatctcct gctcggaaac atcgccgacc accgacatga tcgtccggtt gggacgatag
       61 tagcgcttaa aaaattcttg cacccgttgc cgatccagcc gttttaccga agcttccgtc
      121 ccctccaccg gccggccata agcgctgccg ggaagcaatg ccgcggcaaa cacatcgccc
      181 gccacggtgc cgggatcttc tgctttggcc ttgatcgagg caatgatcgc ttgcttttgc
      241 cggtcgattt ccgccggcgg aaagctcgca ccggtgagga tttcggcgag taactgcaaa
      301 ccaacgccca ggtccttctt gagtatcgtc aagctcatcg tcgccaagtc gtcgccgcag
      361 ccggtatcga gactggcgcc gatgaaatcc aacgtctcgc tgatctgcag agcgcttcac
      421 ttggccgtgc cgtcggtcaa gagttgcgag gttagatgcg ccaggccggt atgctccgcg
      481 ctctcatggc gcgcgccggc atcgatcaac aactcgatgg caaccgtcgg caaagcccgc
      541 tgctcggagg tcagcaacac taggccgtta gcgagcacgg tgcgtttcgg caccatcgcg
      601 gcatgtgccg gcatgccctg cgccaacaaa ctgaacaaaa aaagaccgat caatccacgc
      661 atcattagtt attcgcttta gtcgggatca aggtgccaac cgtacggttg tccctttgga
      721 gatatttctg cgccacacgg cgaagatctt cccgagtgac cttacgcata ttgtcgagat
      781 aactatcgac caagcgccag ccaccgacca tttcgtagta accgaccttc atcgcctggc
      841 cgaagatcga gtcttgggcg aagataaagg ccgcttcgat ttgatttttg gctttctgca
      901 attcgcgttc gctcaccaac gcggctttaa ccttgtcgag ggatcggtca atttgctgct
      961 cgacattgac cagttcagcg ccgggcaaca gttgcgcgga aattgaaaat cccgtggcgt
     1021 ccatggacac cgcgctgtag tcggcatcga tgccgcgcac caagcgcttt tggtacacca
     1081 gctcttgata caaacgcgaa ctcttgccgc cggccaacac gattgacagc agatccagcg
     1141 caaaactgtc ggggctatgc agattgggcg cgtgatgaaa cagcatcagc atcggcagtt
     1201 cggcctcttt tttcagcgtc acgcgttttt caccgcgctg ggacggctcg accagcgtca
     1261 gctttggcgg ttcggagccg cgcggaatct tgccgtaggc ggctttgatc ttcgccagca
     1321 tttcatacga atcgaaatcg ccgaccatga cgatcaccgc gttgttgggc gcatagtaaa
     1381 gtttgtaaaa atccaccagg tcctggcgcg tcaggctttg aatatcctcc atccatccga
     1441 ccacgggacg gcgataagga tgaatggtgt aagccaccga tgcggcgatc tcataaagcg
     1501 ccgaaccggg attgtcgtcg gtgcgcaagc ggcgctcttc ttgaatcact ttcttttccg
     1561 gctcgaaata agtatcgccc aacagcgcat tggccatgcg gtcagcttcc agttcgagct
     1621 gaatatgaat cttgtcccgg ctcatggtcg cgaaatagac cgtcatgtcc gaactcgtaa
     1681 aagcgttgga ccggccgccg ttcttggcga tgatccgcga gtactcttcc ggcgccgtcg
     1741 tcggcgtgcc cttgaacagc atatgctcga gaaaatgcgc caagccgctt ttgccatctt
     1801 tttcattgcg cccgccgacc cggtaccaca cttgaaacgt caccgccgga ctcttgtgat
     1861 cttccaagag cagcactttc aaaccgttgt cgaggatgaa ttcttggact tgcgcggcgc
     1921 tagaagccgc tggaaatgag atggcaagta ggacgacaag cagcgtaatt cgacgaagcc
     1981 aaagcatgtt cacaaaacta aaggatgagg acccaaagtc aagcgaagtg tgaagatcgc
     2041 cgctatttgg agttgcaaac ttttgagcga gaattccaac actccatcac tccaacactc
     2101 catcggcctc cggccggcgc gcaaaaaaga ccagcagcgc ggagagcagg tagctggtga
     2161 gaaaaaacag caaagcggcg cgatagttgc cgctccaatc gaaggccgcg ccggccacca
     2221 aggcaccgag gccgaggccg cctttgtgaa acggttcgag cacaccgctg atagcgccga
     2281 aggagcgccg gccgaagtag tgcgccagca tgatttgtgt caacaccgcc gtgccgccgc
     2341 gcgcgctgat gccaaag
//
LOCUS       DATIRS010001119         2087 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1950892, whole genome shotgun sequence.
ACCESSION   DATIRS010001119 DATIRS010000000
VERSION     DATIRS010001119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2087
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1950892"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            158..1762
                     /gene="ggt"
                     /locus_tag="VLM90_14310"
     CDS             158..1762
                     /gene="ggt"
                     /locus_tag="VLM90_14310"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HSQ14198.1"
                     /translation="MKFSKAARPVIMGQNGGVSSGHFLASLAGVEILKQGGNAVDAAL
                     AAAFVSAVVKPETSGPGGDLFALVYMKKTGKVEALNASGPAPAKASIEEFHRRGLKSI
                     PQYGPLAIAVPGAVDGWLELHKKYGTVDLPRLTADAVRIGREGFPISLEFSEAVHELA
                     ANYPWVDKYYRQPFGAAKPGKILVQPGLAGVFEKIARQGRAGFYSGEIAEKICATVKA
                     EGGLLAPEDLQPVVCQWLEPLASTYRDTTVYEQPPVSQGFMVLEMLNIAEAWPFHDGS
                     MSQAEMVHFQIAAKKLAFEDRIKHLEDPAFGDAKIISQLISKAHAAQRRLLVDEILRR
                     PAASAGHESSDTTYLCATDRDGNAISFIQSVFAPFGSRLIAGDTGVIMNNRLCSFGLD
                     PSKANALKPGKRPAHTLNAYMVFRGGEVFAVGGSPGADEQPQTNFQIIHDLVDLDMDP
                     QSAVEAPRWSHMPGTPPRDQLPEALRMEDGYPSATLDALRAKGHIVTVVDRWSFGSAK
                     VIVRDRDNGSWLGGADPRRVAYALGW"
     gene            1870..>2087
                     /locus_tag="VLM90_14315"
     CDS             1870..>2087
                     /locus_tag="VLM90_14315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14199.1"
                     /translation="MLSRAAAAADGPVLRSNYSGISAGFVPVWIAYDKGLFTKHGLNI
                     DLQYVAPATATQGLLAKSLDVVNPGGEI"
BASE COUNT          388 a          644 c          638 g          417 t
ORIGIN      
        1 aagagggctg catcctgctg cgcaatagtc tgaaagccat tgacggcctc gatctcgatg
       61 ccgccgacaa agaaaagatt ctcggcggca acgccgctag gattcttggc cttgcatcat
      121 aaccctaccg cgaagattag cttcatttag gagtggcatg aaattctcaa aagcagcacg
      181 tcccgtcatc atgggccaga atggcggcgt ctcgtccggc cactttctgg cgtctctcgc
      241 cggcgtcgag attctcaagc aaggcggtaa cgcggttgat gccgctctcg ccgcggcttt
      301 cgtttccgcg gtggttaaac ccgaaactag cgggccaggt ggcgatctgt tcgccctggt
      361 gtacatgaaa aagaccggca aggtcgaagc gctcaacgcc agcggcccgg cgccggccaa
      421 ggcgagcatc gaagagtttc accggcgcgg tttaaagagc attccccaat acgggccgct
      481 cgccatcgcg gtacccggcg ccgtcgatgg ctggctcgaa ctgcacaaaa aatacggcac
      541 cgtggatttg ccgcgcttga ccgccgacgc cgtgcgcatt ggccgcgagg gttttccgat
      601 ctctctggaa ttttccgagg cggtgcatga gttggcggcg aattatcctt gggtcgacaa
      661 atattatcgc cagcccttcg gcgcggccaa gccgggtaag attctcgtgc aaccgggctt
      721 ggccggcgtc ttcgaaaaga tcgcgcgcca gggtcgcgcc ggcttttatt ccggtgagat
      781 tgccgaaaag atttgcgcca cggtcaaggc cgaaggcggc ttgctcgccc cagaagactt
      841 gcagccggtg gtttgccagt ggctggagcc gctggcgtcc acctatcgcg ataccaccgt
      901 gtatgagcag ccgccggtgt cccaaggctt catggttttg gagatgctca acatcgccga
      961 ggcctggccg tttcacgatg gcagcatgag ccaggcggag atggtgcatt ttcaaatcgc
     1021 cgcgaagaag ttggcttttg aggatcgcat caagcatctc gaggatccgg cgtttggcga
     1081 tgccaagatt atttcccaat tgatttccaa agcgcatgcg gcgcagcggc gtctgctcgt
     1141 cgacgagatc cttcgccggc cggcggcttc ggcgggtcat gagagcagcg acacgactta
     1201 tctttgcgcc accgatcgcg atggcaacgc gatctcgttc attcagagcg tcttcgcgcc
     1261 cttcggctcg cggctgatcg ccggtgacac cggcgtgatc atgaacaacc ggttatgcag
     1321 tttcggtctc gatccgagca aggccaatgc gctcaagccc ggcaaacggc cggcgcacac
     1381 gctcaacgcg tacatggtgt ttcgcggcgg cgaagtcttc gccgtgggcg gcagccccgg
     1441 cgccgacgag cagccgcaga ccaactttca gatcattcac gacttggtcg acctcgacat
     1501 ggacccgcag tccgccgtcg aagcgccgcg ctggagccac atgccgggca cgccgccgcg
     1561 cgatcagctg cccgaggcct tgcgcatgga agacggctat ccgagcgcga cactcgatgc
     1621 tttgcgtgcc aagggccaca tagtcaccgt cgtcgatcgt tggtccttcg gtagcgccaa
     1681 ggtcatcgtc cgcgaccgtg acaatggttc gtggttgggc ggcgccgatc cgcgccgcgt
     1741 cgcctacgcg ctcggttggt gagcagcagt ccgattgctt gccaaacaat ttcagatcgc
     1801 gaggatcatc cgctgcgcag cagagtcaac ctttgggccg ccttggcgct cagtttagtc
     1861 gctggatcgg tgctttcacg cgccgccgcc gccgccgacg gcccggtgct gcgctccaac
     1921 tattccggca tcagcgcggg cttcgtgcca gtttggatcg cctacgataa ggggcttttc
     1981 accaagcatg gcttgaacat tgacctgcaa tacgtcgccc cggccacggc gacgcagggc
     2041 ctgttggcca agagcctgga cgtggtcaat cccggcggcg aaattat
//
LOCUS       DATIRS010001120         2590 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1166689, whole genome shotgun sequence.
ACCESSION   DATIRS010001120 DATIRS010000000
VERSION     DATIRS010001120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2590)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2590)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2590
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1166689"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..839)
                     /locus_tag="VLM90_14320"
     CDS             complement(<1..839)
                     /locus_tag="VLM90_14320"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HSQ14200.1"
                     /translation="MEKMQNILTYMTFIPLAGAAVVLALPNNAKLVRWFSAIVTVPPL
                     LMAIWLFNNFDRTTAKFQFVEDYHWIPAYNISYTMGVDGLSISMVLLTALLSFLCIFA
                     SFGIEKAVKGYFALFLMLDAGMMGVFCALDFFLFYVFWEVMLLPMYFLIGIWGGPRRE
                     YAAIKFFLYTLFGSVLMLLAILALYFTVEPHTFDMRIMMAQASKYSTAVLPMWPFNDW
                     GWSFQHAIWLALFIGFAIKIPAFPFHTWLPDAHVEAPTAISVILAGVLLKMGTYGILR
                     VNFP"
     gene            complement(853..>2590)
                     /gene="nuoL"
                     /locus_tag="VLM90_14325"
     CDS             complement(853..>2590)
                     /gene="nuoL"
                     /locus_tag="VLM90_14325"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF005141.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HSQ14201.1"
                     /translation="VVTGIGGLIHIYATGYMHDDKAFWRFFAYLNLFTAAMLTLVLGD
                     SLLLLFVGWEGVGLCSYALIGFWYHDHANARAGNKAFIVNRVGDFGFVLGMFLLFWSL
                     DAQGHGSLTIREMAKWAPSIQDSLIWGWPVVTVATLFLFVGATGKSAQIPLFVWLPDA
                     MAGPTPVSALIHAATMVTAGVYMTARMNVFFSMAPAALHVIAIIGVATALLAATIALT
                     QNDIKKVLAYSTVSQLGYMFIGVGVGGYAAAVFHLMTHAFFKACLFLGAGSVIHAMHH
                     EQDMRKMGGLKQWMPVTFGTFFISVLAIAGFPPFAGFFSKDEILWLAFTSEHGNKAVW
                     FLALCGAGMTAFYMFRQLFMTFYGKCRADHHTQEHLHESPSVMTMPLVILAIGAVFAG
                     LIGLPGVLGGSQFAHWLEPVIRGHGESHASHALEWGLMAVSVAVASFGVLIAFLMYRR
                     ESISPDTFVNLAGGLPYRLFDRKWYFDEIYQTVFVNGTLVMARFWSAFDAYIVDGIVN
                     GVAALTRFVAWLNGLFDTYIIDALVNALADVTYWLGNRFRRLQTGNINGYLYGIIIAM
                     AVAVFVKVRYWS"
BASE COUNT          701 a          719 c          737 g          433 t
ORIGIN      
        1 ggaaagttga cgcgcaggat gccgtaggtg cccattttca atagtacgcc ggcaaggata
       61 accgagatcg ccgtcggcgc ctcgacgtgg gcgtcgggca accaggtatg aaacggaaag
      121 gccggaatct tgatcgcgaa gccgataaac agcgccagcc agatcgcatg ctggaagctc
      181 caaccccaat cgttaaacgg ccacatgggc aacaccgcgg tgctgtactt gctcgcctgg
      241 gccatcatga tacgcatgtc gaaggtatgc ggttcgacgg tgaaatagag ggcaagaatc
      301 gccaacagca tcaacacgct gccgaacaag gtgtagagaa aaaactttat ggcggcatat
      361 tcgcggcgcg gcccgcccca aatgccgatg agaaaataca tcggcaatag catgacttcc
      421 cagaagacgt agaaaagaaa gaagtcgaga gcacaaaaca cgcccatcat gccggcgtcg
      481 agcatgagaa acagcgcgaa gtaaccttta accgcctttt caatgccaaa cgaagcgaag
      541 atacagagga agctgagcag cgccgtgagc agcaccatgg aaatactcag gccgtcgaca
      601 cccatggtgt agctaatgtt gtaggcggga atccaatgat aatcctcaac aaactgaaat
      661 ttagccgtgg tgcggtcgaa attattgaac agccagatcg ccatcagcaa tggcggcacg
      721 gtgacgatgg cggaaaacca gcgcaccagc ttggcgttgt tgggcaatgc cagaaccacc
      781 gccgcccctg ccagcggaat gaacgtcatg taggtgagaa tattttgcat cttctccatg
      841 ctccagtaaa aatcagctcc agtatcggac tttgacgaac acggccaccg ccatcgcgat
      901 gatgatgccg tagagataac cgttgatgtt gccggtctgt agccggcgga atcgattgcc
      961 cagccagtaa gttacatcgg ccagcgcatt gaccagagcg tcgatgatgt aggtatcgaa
     1021 cagaccgttg agccaggcga cgaagcgggt cagcgccgcc acgccattga cgatgccgtc
     1081 gacgatatag gcatcgaagg ccgaccagaa gcgcgccatt accaacgtgc cattgacgaa
     1141 aaccgtttga tagatctcat cgaagtacca tttacggtcg aacaatcggt acggcaggcc
     1201 gccggcgagg ttgacaaaag tatccggaga tatggattct cgccggtaca tcagaaaggc
     1261 gatcaagaca ccgaaggatg cgacggcaac cgaaaccgcc atcaaacccc actcgagcgc
     1321 atgggacgca tggctttcgc catggccgcg aatcaccggc tccaaccagt gagcgaactg
     1381 gctgccaccc aagacgccag gtaaacctat cagaccggcg aacacggcgc cgatcgccaa
     1441 aatcaccagc ggcatggtca tcaccgacgg cgattcatgc aagtgttcct gcgtgtggtg
     1501 gtcggcgcgg cacttgccgt aaaaggtcat gaataactgg cggaacatat agaacgccgt
     1561 catgcccgcg ccgcacaggg ctaagaacca aaccgctttg ttgccatgct cgctggtaaa
     1621 ggccagccag agaatttcat ccttggagaa gaagccggcg aacggaggga agccggcgat
     1681 ggcgagcacg gaaatgaaaa acgtaccgaa cgtcaccggc atccactgtt tcagcccgcc
     1741 catcttgcgc atgtcctgct catggtgcat ggcgtgaatt acgctgccgg cgccgaggaa
     1801 gagacaggct ttgaaaaaag cgtgggtcat caggtgaaat accgcggccg cgtaaccgcc
     1861 aacgccgaca ccgataaaca tgtagccaag ctgactgacc gtcgagtagg cgagaacttt
     1921 tttgatatcg ttttgcgtca gcgcgatggt cgccgccagt aacgcggtgg caacaccaat
     1981 gatcgcaatg acgtgtaaag cggccggtgc catggaaaag aacacgttca tccgcgccgt
     2041 catataaacg ccggcggtga ccatggtcgc cgcgtggatc aatgcgctga ccggcgtcgg
     2101 tccggccatc gcgtcaggca gccaaacgaa gagcggaatt tgcgccgact taccggtagc
     2161 gccgacgaac aggaaaagcg tggcaacggt aacgactggc caaccccaaa tgagcgaatc
     2221 ctggatcgac ggcgcccatt tggccatctc gcgaatggtc agcgagccat ggccctgggc
     2281 atcgagggac cagaacaata aaaacatgcc gaggacaaac ccgaagtcgc cgacccggtt
     2341 gacgatgaaa gctttattgc cggcgcgggc gttggcgtgg tcatgatacc aaaaaccgat
     2401 cagtgcgtag gaacataacc cgacgccttc ccaaccgacg aacagcaaga gcaggctgtc
     2461 gcccagcacc aaggtgagca ttgccgcggt gaaaagattt aaataagcga agaaacgcca
     2521 gaacgccttg tcgtcatgca tgtagccggt ggcgtaaata tggatgagcc cgccgatgcc
     2581 ggtgaccacc
//
LOCUS       DATIRS010001121         1893 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_181683, whole genome shotgun sequence.
ACCESSION   DATIRS010001121 DATIRS010000000
VERSION     DATIRS010001121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1893)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1893)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1893
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181683"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..426
                     /locus_tag="VLM90_14330"
     CDS             <1..426
                     /locus_tag="VLM90_14330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14202.1"
                     /translation="FRARKAGLSELMDVTKDGPEYVSVAIGSTRSFIKANEEMTRRFI
                     RGYSEGLQFLKANKAAGIRAIQKYARIKDPEILEATYGEARAYIETIPYVTRKGMETI
                     IGELLPTEPKAKTAKPEDFLDTRFVAQLEKEGFYKAAAK"
     gene            568..1398
                     /locus_tag="VLM90_14335"
     CDS             568..1398
                     /locus_tag="VLM90_14335"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSQ14203.1"
                     /translation="MPNVKLPTGVDFYYESHGNGEPLIFVPSTAYSGEVWKPWQMPLA
                     KSLQLIFHDPRGCGRSVPTQSVYTIEQMALDIVAMMDHLKLPAAHFIGHSMGGRIALS
                     LAQNFPGKVKSLIMAASGSGTAGRAGSDCVPGLPHRLVYDMVEMGFEKFIYDEIVESD
                     TFFTEDFRTAHRDQVEAFFKVAWATHAKLDPFIHLCIARHNFEGTHRLGDVQAPTLVL
                     IGEADTVGSNHIAQARVLLERIPGAEMKVLKGQSHGFFWQAPEETNAVILEWVKKHSG
                     "
     gene            complement(1456..>1893)
                     /locus_tag="VLM90_14340"
     CDS             complement(1456..>1893)
                     /locus_tag="VLM90_14340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14204.1"
                     /translation="FLEDPVYWRMIHAFMTSLPGALARRAKPEAEIRAEAQQKGLSKA
                     DETLEVYKAHHFSPHALTRLQTDNRDWAIEFETYFKRIGVPTTILVADHKAGGAIMRE
                     ELTYLQRLAPPQVKLEFWENTGHGMKAAKPAEYNNALEAWLKQ"
BASE COUNT          401 a          512 c          571 g          409 t
ORIGIN      
        1 ttccgcgctc gtaaagccgg attgagcgag ttgatggacg tgaccaagga cggccctgag
       61 tacgtatcag tggctatcgg ttcgacccgc tcgttcatca aggccaatga agagatgacg
      121 cgccgtttca tccgcggcta cagcgaaggc ttgcagtttt tgaaggcgaa caaagccgcc
      181 ggcatccgcg cgattcaaaa atacgcgcgc atcaaagatc cggagattct cgaagcgacc
      241 tacggcgaag cgcgcgctta catcgagacg attccgtacg tgacgcgcaa aggcatggaa
      301 acgatcatcg gcgagttgct gcccaccgag cctaaggcca agacggctaa gccggaggat
      361 tttctcgaca cgcgctttgt cgcgcagttg gagaaggaag ggttttacaa agcggcggcg
      421 aagtgaagag ttcaagatta gatccctcac tggcggtcgg gatgatagat gccgacgctc
      481 tatgaactac gctagctgtg tcatttcgag cgcagcgaga aatctatcat aggccgaaac
      541 ctctaatcga aggcaaagga gcgcatcatg cccaatgtaa aactacccac gggtgtcgat
      601 ttctattacg aaagccacgg caacggagag ccgttgatct tcgtgccgtc aaccgcttat
      661 tccggcgagg tgtggaagcc ttggcagatg ccgctggcga agtctctgca attgatcttc
      721 cacgatccgc gcggctgtgg ccggtcggtg ccgacgcaat ctgtttacac catcgagcaa
      781 atggccttgg acatcgtcgc gatgatggat cacttgaaac tgccagcggc ccatttcatc
      841 ggccactcca tgggcgggcg catcgcattg tcgctggcgc aaaactttcc cggcaaggta
      901 aaaagtttga ttatggcggc aagcggttcg ggtaccgcgg gccgggccgg ttcggattgc
      961 gtgccgggtt tgccgcaccg cttggtatac gacatggtcg agatgggctt cgagaaattc
     1021 atttacgatg agatcgtcga gtcggataca tttttcaccg aagattttcg cactgcgcac
     1081 cgcgaccagg tcgaagcatt ttttaaagtc gcctgggcga cccacgccaa gctcgatcct
     1141 ttcattcatc tatgcatcgc gcgccacaac ttcgaaggaa cccatcgctt gggcgatgtc
     1201 caggcaccga cgttggtgct gatcggcgag gccgatacgg tgggcagcaa tcatatcgcg
     1261 caagccagag tattgttgga acgcatcccc ggcgccgaga tgaaagtgct caagggccaa
     1321 tcccatggtt ttttctggca ggcgccggag gagactaacg cggtcattct tgaatgggtg
     1381 aagaagcaca gcgggtaggc acgagaagag ggcggccaac cggccccgcg aaattcattt
     1441 cacgcggatc aatcgctact gcttgagcca cgcctccaat gcgttgttgt attccgccgg
     1501 cttggccgcc ttcatgccgt ggccggtatt ttcccagaat tctaatttta cctgcggcgg
     1561 cgcgaggcgt tggaggtagg tcagttcttc gcgcatgatg gcgccgccgg ctttgtggtc
     1621 ggcgaccagg atcgtcgtcg gcacgccgat gcgcttgaag taagtctcaa actcaatggc
     1681 ccagtcgcgg ttatcggtct ggaggcgggt cagggcgtgg ggcgagaagt gatgcgcttt
     1741 gtagacttcc agggtttcgt cggcttttga caatcctttt tgctgcgctt cggcgcggat
     1801 ctccgcttct ggtttcgcgc gccgtgccag cgcgccgggc aggctcgtca tgaaggcgtg
     1861 aatcatgcgc cagtagaccg gatcttccag gaa
//
LOCUS       DATIRS010001122         3498 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1756861, whole genome shotgun sequence.
ACCESSION   DATIRS010001122 DATIRS010000000
VERSION     DATIRS010001122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3498)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3498)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3498
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1756861"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(126..1121)
                     /locus_tag="VLM90_14345"
     CDS             complement(126..1121)
                     /locus_tag="VLM90_14345"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14205.1"
                     /translation="MDNRVRAGVAIVLLLLALGIAPAQAQKLVIAWTAVSAFNAPFWI
                     MHDAGFYKEEGLDVDTMYIASSPVAAKATLAGDVVISAQNSQVIADSGLQGGDLVAIG
                     ATVNIVPFYVMAAPEIKTVADLKGKTIGVSRFGAATDFGMRMFLAKHGLEAHKDVAFI
                     QIGGMPEIAAALSKKIIAAAPMSYPMVYVAEQGGAKVLANLAKDEIPFVHLTLTTTKR
                     FVKERRPAAKAFLRAYGKAMHFIYNRPAETKTIFAKYTKVTDPRILDGSLKYGYEFME
                     KVPFVKAAGFQVTLDEIGRTNPKAKQAKPGQFYDNSLVQELLDEGFFVKLWGRNP"
     gene            complement(1121..2110)
                     /locus_tag="VLM90_14350"
     CDS             complement(1121..2110)
                     /locus_tag="VLM90_14350"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14206.1"
                     /translation="MKNQLGKFLIALALLLLPAAAQAQKFVQAYSSISALNATFWIIQ
                     DAGFAKQEGLDTELVYIPSSSTVAQATLAGEVMISPANGQVVADVSLQGGDLVAMGGI
                     TNVVAFYIMATPEIKTIADLKGKTVGVTRFGSSGDVGMRMFLTKYGLDPVKDVPMIQL
                     GGLPEIAAAMGKRTVHAAAFSQPIAYVAQQGGAHLLANLAKENIPFLHVGVTTTRKFM
                     RERRAQAKAYLRAYGRAVHFMHSKKEDTKAIISKYTKIKDQGMVDGSLTYAYDFIEKV
                     PLVKAAAFQVTLDDIAKKNPKAKSAKPEQFYDNSLVQELIDEGFFVKLWGRAP"
     gene            2251..3444
                     /locus_tag="VLM90_14355"
     CDS             2251..3444
                     /locus_tag="VLM90_14355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HSQ14207.1"
                     /translation="MSITNKAAIVGIGDTPTDRLGSKPGEPRKSSAEYLAWAMHLALE
                     DAGLSLKDFQGQGLGVTIPTAYPQPFWPEEVSEILGITPGFLLGGATGGAGAVSLMGG
                     MSAAINSGLIDLALVIGAAAPFSEHWGGGIQPGDMRDWEIPYGTMGPNSKIAMVMRRH
                     MHEYGTTLDHLGKIAVTARYHSSLNPLGYLRSPMTIDDYKKSRLVADPVRLFDCVMPA
                     NGGKAYILASPERAKALRKKPVWVKGFGERSNPSYGPRAGSDALIMGVKDAGRVAMEM
                     AGVKHKDINFLQLYDDYVIVVYLQIEDLGFCQKGDLKFFENTDFTFKGQLPIQTGGGI
                     INCGQPSTAGGLHHILEGVRQLRGEGGERQVPNAKIGLISGLGVLPYGKNLGCCAVSI
                     LGNEL"
BASE COUNT          733 a         1014 c          969 g          782 t
ORIGIN      
        1 accggaggct cttcgttgta catctcatcc tctcacaagt attttcgaag gatctgacgc
       61 aggacacgaa ggtttccgag gctggtaatt ccgaacttcg cgtccttcgt ggtgagtatt
      121 ccggtttacg gattgcggcc ccataatttc acgaaaaatc cttcgtcgag cagctcttgc
      181 accaaactgt tgtcgtagaa ctggcccggc ttggcttgtt tcgccttggg gttggtccgg
      241 ccgatctcat cgagagttac ctggaatcca gcagctttaa cgaacgggac cttctccata
      301 aactcgtagc catatttcaa gctgccgtcg aggattcttg gatcagtgac cttggtgtat
      361 ttagcgaata tcgtcttcgt ctcggccggt cggttgtaaa tgaaatgcat cgccttgccg
      421 taggcgcgca aaaaagcttt cgccgctggc cgcctttctt tgacgaagcg tttggtggtc
      481 gtcagagtca agtgaacgaa gggaatctca tccttggcga gattggccag cacctttgcc
      541 cctccctgtt cagcgacata gaccatcgga taagacattg gcgccgccgc gataatcttc
      601 ttggacagcg ccgcggcgat ctcgggcatg ccgccgattt gaatgaacgc tacatcctta
      661 tgagcttcga gcccatgctt cgccagaaac atgcgcatac cgaagtcagt ggctgcgcca
      721 aaacgcgaga caccgatagt tttgcctttg aggtcggcga cggtttttat ctcaggcgcg
      781 gccataacat agaaaggcac gatattcacc gtcgccccga tcgccaccaa gtcgccgcct
      841 tggagccccg agtccgcaat cacctggcta ttttgcgcgc taataacgac atcaccggcc
      901 agcgtcgctt tcgccgccac cggcgagctg gcgatataca tggtatcgac gtccaaacct
      961 tcttctttgt agaatccggc gtcgtgcatg atccaaaacg gcgcattgaa cgcgctcacc
     1021 gcagtccagg caatgaccag cttttgcgcc tgcgccggcg cgatgccgag agcgagcagc
     1081 agaagtacga tcgcaacgcc agcacgaacg cgattgtcca ttacggcgcc ctcccccaca
     1141 gtttcacgaa gaaaccttca tcgatcaatt cctgcaccag gctgttatca tagaactgtt
     1201 ccggcttggc gctcttcgct ttgggatttt ttttggcgat gtcgtcgagc gtgacctgga
     1261 aagcggcggc ttttaccagc ggcacttttt cgatgaagtc gtaagcgtac gtcagactgc
     1321 catcgaccat accttgatct ttgatcttgg tatatttgct aatgatcgct ttggtgtctt
     1381 cctttttcga atgcatgaag tggacggcgc ggccgtaggc gcgcaggtaa gcttttgcct
     1441 gggcgcgccg ttcgcgcatg aacttgcgcg tcgtggtcac gccgacatgg agaaacggaa
     1501 tgttttcctt cgccagattc gccaacagat gcgccccgcc ctgctgtgcg acgtaagcta
     1561 tgggttgaga aaatgccgcg gcatgcaccg tgcgcttgcc catcgccgcg gcgatctcgg
     1621 gcagcccgcc gagctgaatc atcggcacat ccttcaccgg atccaaaccg tatttagtta
     1681 aaaacatgcg catgccgacg tcgccggagg agccaaagcg ggtcacgccg acggttttcc
     1741 ccttgagatc ggcgatggtt tttatttccg gtgtcgccat gatgtagaac gccacgacat
     1801 tggtgatgcc gcccatcgcc actagatcgc cgccttgcag gctgacatcg gcgaccactt
     1861 ggccgttggc gggtgagatc atcacctcgc cggcaagcgt cgcctgggcc acggtcgatg
     1921 aactgggaat gtagaccagc tcggtgtcga gcccttcttg cttggcgaat ccggcatcct
     1981 ggataatcca gaaggtcgcg ttgagcgcgc taattgatga gtatgcttgc acgaactttt
     2041 gcgcctgtgc cgcagcaggc aaaagcagca aggcgagagc gattaaaaat ttccccagtt
     2101 gatttttcat ttccgtccta tccgacttat ccgtccgatt ctttccagca gtggtaccgg
     2161 cacctcacag cgctgtcaag ccaagcaaga cttcccttga aatgatccga cagctgtcct
     2221 atggtcccgg ctgaaaccat tggacggacc atgagcataa caaacaaagc ggcaatcgtt
     2281 ggcatcggcg acactccgac ggatcgcttg ggctccaagc ccggcgagcc acgcaagtcg
     2341 agcgccgaat atctagcttg ggccatgcat ctcgcgttgg aagacgccgg cttaagcctc
     2401 aaggatttcc agggacaggg actcggcgtg acgattccca cggcgtatcc ccaaccgttc
     2461 tggccggaag aggtcagcga gatcctcggc atcacgccgg gcttcttgct cggcggcgcc
     2521 accggcggcg ccggagcggt gtcgctgatg ggcggcatga gcgcggcgat caattccgga
     2581 ttgatcgatc tcgcgctggt gatcggcgcg gccgcgccct tctctgaaca ttggggcggc
     2641 ggtattcagc ccggcgacat gcgcgactgg gaaatcccct acggcaccat ggggcctaat
     2701 agtaaaatcg ccatggtcat gcgccggcac atgcatgaat acggcacgac cctcgatcat
     2761 ctcggcaaga tcgccgtcac ggcgcgctat cactcaagct tgaacccgct cggctacctg
     2821 cgctcgccga tgactatcga tgattataaa aagtcccgct tggtcgccga tccggtgcgc
     2881 ttgttcgact gcgtgatgcc ggccaacggc ggcaaggcct atatcctggc ctcgcctgag
     2941 cgcgccaaag cattgcgcaa gaaaccggtg tgggtcaaag gcttcggcga acgcagcaat
     3001 ccctcctacg gcccgcgcgc cggttccgat gctctaatca tgggcgtcaa agacgccggc
     3061 cgagtcgcca tggagatggc cggggtaaag cacaaggaca ttaatttttt gcagctctat
     3121 gacgactacg tgatcgtggt ttacttgcag atcgaagact tgggtttttg ccagaaaggc
     3181 gatctcaaat tcttcgagaa caccgacttt actttcaaag gtcaactgcc gatccaaacc
     3241 ggcggcggga ttatcaactg cggccagcct tccaccgccg gcggcttgca tcatatttta
     3301 gaaggcgtgc ggcagttgcg cggtgaaggc ggcgagcgcc aggtgcccaa tgccaaaatc
     3361 ggcttgatct ccggattggg cgtgctgccc tacggcaaaa atctcggttg ctgtgccgtg
     3421 tcgatattgg gcaacgaact gtagagacat aaaaatcgtt cgtgcttgtc gaagcgcgaa
     3481 ctcggcgaaa agaataaa
//
LOCUS       DATIRS010001123         1983 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1068695, whole genome shotgun sequence.
ACCESSION   DATIRS010001123 DATIRS010000000
VERSION     DATIRS010001123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1983)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1983)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1983
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1068695"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..488
                     /locus_tag="VLM90_14360"
     CDS             <1..488
                     /locus_tag="VLM90_14360"
                     /inference="COORDINATES: protein motif:HMM:NF013304.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HSQ14208.1"
                     /translation="AATVVGLGGVSLLIPMSALAADEPAARIAWTLQWVVLPIFPLMI
                     FIMRVANHRFSTPEDIDGSGLTIGTSRILVLRAILQNTLEQAMLAVAVYLIWAAVMPH
                     SWLRAIPVAAILFVVGRILFAIGYERGAAARATGFGLTAYPTFGMLTILAAFLAWRIL
                     R"
     gene            543..1436
                     /locus_tag="VLM90_14365"
     CDS             543..1436
                     /locus_tag="VLM90_14365"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF012904.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HSQ14209.1"
                     /translation="MATSGFHGVFPYLVSPIDSSGAVKSDVLARLCDDLINSGVHGLT
                     PLGSTGEFAYLNWAQRRRVVEVVIEAASGRVPVVAGVASTTIADATAQAREFEQMGAS
                     GILAILEAYFPLSDGGVFDYFKAIADAVSLPVVLYTNPTFQRSDLSLPVIDRLSHIAN
                     IGYIKDASNNTGRLLSILNQVQGRMKVFAASAHIPAAVMLIGGVGWMAGPACVAPRQS
                     VALYETCRRGDWTGAMELQRPLWALNQAFAKYNLAACIKGALELQGYAVGAPLPPQAP
                     LTAEALADVKQTLIALGALKQ"
     gene            1520..>1983
                     /locus_tag="VLM90_14370"
     CDS             1520..>1983
                     /locus_tag="VLM90_14370"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14210.1"
                     /translation="MLRSLHAKPVANVIIIAFLLIFTLVSDALAATPTKRVRILFADF
                     SERMGLFFVAKDQHFFEEHGLEADLVQVNSGPVAVAAMAANEAEFYTVSATGSALGAM
                     VSGLDLVWVAGMINKLDGYFYVAPKIQKPDDLKGKIIGVQSIGGGIGMFTMMT"
BASE COUNT          354 a          542 c          630 g          457 t
ORIGIN      
        1 cggcggccac ggttgtcggt ctcggcgggg tgtcgttgtt aattcccatg agcgcgcttg
       61 cggcggacga accggcggcg cgaattgcct ggactttgca gtgggttgtg ttgccaattt
      121 tccctctgat gattttcatc atgcgcgtgg ccaaccaccg attctccacg ccggaagata
      181 ttgatggcag cgggttgacc atcggaacct cgcgcatatt ggtgctgcgg gcaattttgc
      241 agaatacctt ggagcaggcc atgctggccg tcgccgtata tttgatttgg gcggcggtca
      301 tgccgcatag ttggctgcgg gcgattccgg tggccgcgat actgttcgtc gtgggccgca
      361 tcctattcgc catcggttac gaacgcggcg ctgcggcgag ggcaacggga ttcgggctca
      421 ctgcctaccc gacttttggc atgttgacga tattggcggc gtttctggcg tggcgaatac
      481 tgcgctgaaa cgccggttcg ccgaacaggt gaaagatcaa cgttcatggt tcaaaggcta
      541 tgatggcaac ttccggcttc catggtgttt tcccgtatct ggtttcgccg atcgattcat
      601 ccggcgcggt caagagcgat gttctggcgc gcctgtgcga cgacctgatt aattccggcg
      661 tccatggcct gacgccgctc ggttcgaccg gcgagtttgc ctatctgaat tgggcgcagc
      721 ggcggcgggt ggtcgaagtc gtcatcgagg cggcgagcgg acgggtgccg gtggtggccg
      781 gggtggcatc gacgaccatc gcggatgcga cggcgcaggc gcgggagttc gagcagatgg
      841 gggcgagcgg cattctcgcc attctcgaag cctattttcc gctttcggac ggcggcgtgt
      901 tcgattactt caaggcgatt gccgacgcgg tttcactccc cgtggtgctc tataccaatc
      961 ctaccttcca acgctccgat ttaagcctgc cggtgatcga ccggctcagt cacattgcca
     1021 acatcggtta tatcaaagac gcatcgaaca ataccggccg gctcctgtcg attctgaatc
     1081 aagtgcaggg gcggatgaaa gtatttgccg cgtcggcgca tattcccgcc gcggtcatgt
     1141 tgatcggcgg tgtcggctgg atggcggggc cggcctgtgt cgcgccgcgc cagagtgttg
     1201 cgctttacga gacttgccgg cgcggcgatt ggacgggagc gatggagttg cagcggccgc
     1261 tgtgggcgct caaccaggcc ttcgccaaat acaatctcgc cgcctgcatc aaaggcgccc
     1321 tcgaacttca gggttacgcg gtgggcgcgc cattgccgcc gcaagcgccg ctgacggcgg
     1381 aagcgcttgc ggacgtgaag cagacgctaa tcgctctcgg cgctctgaag cagtgattgc
     1441 aattttacac cgggtggagt tattcaatta cccagactct tcgattatcg tcgataactc
     1501 ggttggaagg agtttctcca tgctgcgttc gctccatgcg aagcctgttg caaacgtgat
     1561 cattatcgcg ttcctattaa ttttcactct ggtgtcggac gctttggcag cgacgccgac
     1621 aaagagagtg cgcatcctct tcgctgactt tagcgaacgc atggggcttt tcttcgtcgc
     1681 caaagaccaa catttttttg aagaacatgg gcttgaagcc gatctcgtcc aggtgaacag
     1741 cggtccggtg gcggtggcgg cgatggcggc caacgaggcg gagttctaca ccgtctcagc
     1801 gactggctcg gccctcggcg ccatggtgag cggcctcgat ctcgtctggg tcgcgggaat
     1861 gatcaacaag cttgacggat acttttacgt tgccccgaag attcaaaaac cggacgattt
     1921 gaaagggaaa attatcggcg tgcagagtat cggcggcggc atcgggatgt tcacgatgat
     1981 gac
//
LOCUS       DATIRS010001124         2722 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1363394, whole genome shotgun sequence.
ACCESSION   DATIRS010001124 DATIRS010000000
VERSION     DATIRS010001124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2722
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1363394"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..528
                     /locus_tag="VLM90_14375"
     CDS             <1..528
                     /locus_tag="VLM90_14375"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR00121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004077 - biotin-[acetyl-CoA-carboxylase]
                     ligase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HSQ14211.1"
                     /translation="QITLMAAVAVAEVVEAFVPERPAIKWPNDILIGGKKLAGILTEA
                     ACSAERVEYAILGIGVNLNYAGAAMPEEIRRRATSVLEVAGHAVHRESFLQRLIQGIE
                     RCYGELEQAGFDALAARWESYFSWRGRRVRVELLDQVTTGTAQGIDRDGALVIVDDGG
                     SARRILAGDVILVEN"
     gene            539..1315
                     /locus_tag="VLM90_14380"
     CDS             539..1315
                     /locus_tag="VLM90_14380"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: protein motif:HMM:NF009855.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HSQ14212.1"
                     /translation="MLLAIDIGNTNIVLGLYQGKKLITHWRLATQAERTADEYGVILT
                     QLVEHGGFRCAQISAIAVSCVVPPMLTTTQEFAARFFDREPLFVGPGIKTGMPILYEN
                     PKDVGADRIVNGIAAYDKYRDACIVVDFGTATTIDLISPKGEYIGGAIAPGLSISLEA
                     LVQRASKLPRIEIVKPKEVIGRNTVNSIQAGIFYGYVGLVDGLVKRIQKEQNIRVKVV
                     ATGGLAPLVASECATIDEVDEFLTLDGLRIIHERNAVTRQ"
     gene            1360..>2722
                     /locus_tag="VLM90_14385"
     CDS             1360..>2722
                     /locus_tag="VLM90_14385"
                     /inference="COORDINATES: protein motif:HMM:NF012239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HSQ14213.1"
                     /translation="MAATEFDKLRNVGILGQGGSGKTSLGEAMLFAAGATQRLGKVLD
                     GTSVLDYEPEEIKHRVTISTAFHSLAWKKHSITLIDTPGYAAFLADSINSIRAMGGAV
                     FVLNPTVGVRVESERLWARADEDGVSRLLFVSKMDHEQADIRERIAPMLESFGAKGIY
                     LQMPIGTEGGFKGVVDLVAMKAFIYEGDTGKYAETDIPAELKDEAQEWREKLNEEISE
                     FDDELIEKFLDGKEFSTDEMKKAIRDATRERRIFPIMFGSPLRQVGVTQLLDAVTDYL
                     PAPLDEAAFEGKNPANEETLKRSHDPDAPFSAYVFKTVIDPFAGKLSILRVLSGKLTS
                     DLTAYVPSRQIRERVGHIFRLEGKKQEAVREALAGEIVAVAKFKDIATGDTLCDEKAP
                     IQYDGPVHFTPNISFALEPKSKADEDKLPNGLHRMREEDQTIELHRDEETRDFILSGM
                     GQQH"
BASE COUNT          595 a          742 c          834 g          551 t
ORIGIN      
        1 cagatcactt tgatggcggc ggtggcggtg gccgaagtcg tcgaggcgtt cgtgccggag
       61 cggcccgcca tcaaatggcc caacgacatt ctcatcggcg gtaaaaagct tgccggcata
      121 ctcacggaag cggcctgctc ggccgagcgc gtggagtatg cgattttggg catcggcgtc
      181 aatctcaatt acgccggcgc ggcgatgcct gaagagattc gccggcgcgc cacctcggtg
      241 ctggaagtgg ccggccatgc ggtccatcgg gaaagctttc tgcaacgatt gattcaaggt
      301 atcgagcggt gttatggaga gcttgaacaa gctggcttcg atgctttggc ggcccgttgg
      361 gagagttatt tcagctggcg cgggcggcgc gtgcgggtcg aattactcga tcaagtgacc
      421 acgggaactg cccaaggcat cgatcgcgat ggcgccctgg tgatcgttga tgacggcggc
      481 agcgcccgga ggatcctcgc cggcgatgtg attttagtgg agaattgaca cgcaattcat
      541 gctgcttgcc atcgacatcg gtaacaccaa catcgttctt ggcctgtacc aaggcaagaa
      601 actcatcacc cattggcgcc tggcgacgca agcggagcgc accgccgatg aatacggcgt
      661 catcttaacc cagctggtcg agcatggcgg ttttcgctgc gcgcaaattt cggccatcgc
      721 ggtttcctgc gtggtgccgc ccatgctcac cacgacgcaa gagttcgccg cccggttttt
      781 cgatcgcgag cctctcttcg tcggccccgg catcaaaacc ggcatgccga ttctttacga
      841 gaaccccaag gatgtcggcg ccgaccgcat cgtcaacggc atcgccgcct acgataagta
      901 tcgcgacgct tgcatcgtcg tcgacttcgg cacggctacg accatcgatc taatctcgcc
      961 aaaaggcgaa tacatcggcg gcgcgatcgc gccagggctg tcgatttccc tcgaagcgct
     1021 ggtacagcgg gcgtcgaagt tgccgcgcat cgaaattgtc aaaccgaagg aagtgatcgg
     1081 ccgcaatacc gtcaactcga ttcaggcggg aattttttac ggttatgtcg ggctggtcga
     1141 cggcctggtc aagcgaattc aaaaggaaca gaacatccgg gtcaaagtgg tcgccaccgg
     1201 cggcttggcg ccgttggtcg cgtcggagtg cgcgaccatt gacgaagtcg acgaattttt
     1261 aactcttgac ggcttgcgca tcatccatga aaggaatgca gtaacgaggc aataaggaaa
     1321 atagcaaccg agcggaattt ggaaggagga atccttggta tggctgcaac cgagttcgat
     1381 aaactgcgta acgtcggcat tctgggtcag ggaggttcgg gaaaaacctc attaggcgag
     1441 gcgatgttgt ttgcggcggg ggcgactcag cggctgggca aggtcctaga cggcacttca
     1501 gtgctcgatt atgagccgga agagatcaaa catcgggtca cgatctcgac ggcgtttcac
     1561 tccttggctt ggaagaaaca tagcatcacg ttaatcgaca cgccgggtta cgcggcgttt
     1621 ctggccgact cgatcaacag tatccgcgcc atgggcggtg ccgtttttgt cctcaatccc
     1681 accgtcggcg tgcgcgtcga atcggagcgc ttatgggcgc gcgcggacga agacggcgtc
     1741 agccgtttgc tattcgtgag caagatggat cacgagcagg ccgatattcg cgagcgtatc
     1801 gcgcccatgt tggaatcttt cggcgctaag gggatttact tgcagatgcc gatcggcact
     1861 gagggcggtt ttaaaggcgt cgtcgacctg gtggcgatga aagcgtttat ttatgagggt
     1921 gacacgggca aatacgcgga aaccgatatt cccgccgagc tcaaggacga ggcgcaggag
     1981 tggcgcgaga aattgaatga ggagatttcc gaattcgatg acgagctgat cgagaagttt
     2041 ctcgacggta aagagttctc tacggatgaa atgaaaaagg ccatccgtga cgccacccgg
     2101 gagcggcgga tttttcccat catgttcggt tcgccgctgc gccaggtcgg cgtgacgcaa
     2161 ctgctcgatg cggtaaccga ctatttgccc gcgcctctcg atgaggcggc gttcgaaggc
     2221 aagaatccgg caaacgaaga aacgctcaag cgcagccatg atcccgacgc gccgttttcg
     2281 gcctatgtat ttaagaccgt gatcgatcca ttcgccggca agctgtcgat tctccgcgtg
     2341 ctttcgggca agctcacctc cgacctgacg gcctacgtgc cgagccggca aattcgcgaa
     2401 agggtcggcc atatatttcg cctcgaaggc aagaagcagg aggcggtcag ggaagcgctg
     2461 gccggcgaga tcgttgccgt cgccaagttc aaggacatcg ccaccggcga tacgctgtgc
     2521 gacgaaaagg cgccgattca atatgacgga ccggtgcatt tcacgcccaa catttcgttt
     2581 gccttggagc cgaagagcaa agccgacgaa gacaagctgc ccaatggctt gcatcgcatg
     2641 cgcgaggaag atcagactat cgaactgcat cgcgacgaag aaacccgcga ttttatttta
     2701 tccggcatgg gccagcagca ca
//
LOCUS       DATIRS010001125         3123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1951509, whole genome shotgun sequence.
ACCESSION   DATIRS010001125 DATIRS010000000
VERSION     DATIRS010001125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3123
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1951509"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            86..796
                     /locus_tag="VLM90_14390"
     CDS             86..796
                     /locus_tag="VLM90_14390"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSQ14214.1"
                     /translation="MSGNDIIFEQIRSSGCLSYVLGCAQEKTCIVIDPEIDKADDYAS
                     LVKFFGAKLVYAIDTHTHADHNSACKLMRERYDVKVVMHRATDAPYVDVRVEDGEEIR
                     FGTQSLKVIFTPGHTQDAMCLLFNDRIFTGDTLLIGGCGRTDLPGGSAEQQWDSLRRL
                     HALGNELRVYPGHDYREAVSTLGDEKQKNPRLTIPSRDEFIQFMTSRHPPLPRKIQEA
                     LEWNRTPIYRQRGLGEGI"
     gene            926..2794
                     /gene="recQ"
                     /locus_tag="VLM90_14395"
     CDS             926..2794
                     /gene="recQ"
                     /locus_tag="VLM90_14395"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR01389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HSQ14215.1"
                     /translation="MKREPSNTDSANPDILETLRRYWGYNELRPLQEQAILAELSHRD
                     SLVVMPTGGGKSLCYQIPAAVAKRTDIVISPLISLMKDQVDGLRECGYPAATLYSGMP
                     PHAVHETEAQFLAGRYRLLFVAPERLLTPHFMELAEKIKIHAFAIDEAHCISHWGHDF
                     RPEYRRLAELKKHFPKASLHAYTATATERVRLDIAQQLKLRNPELLVGTFDRPNLVYR
                     IVPRVDARAQVLEILKRHANQAAIVYCLSRNDTESMASFLQSNKIRAAHYHAGMEPEQ
                     RRRTQEEFASEALDVVAATVAFGMGIDRSDVRCVIHAAMPKSVEHYQQETGRAGRDGL
                     EAECVLLYSAADVLRWDSLITRNATDADSTPETIAASRQLLDHMRQICSGVHCRHKKL
                     SEYFGQAYPKPNCEACDVCLSEVEGLADATVAAQKILSCVARVGERFGIAHIVDVLAG
                     ANTERVRRWEHEKLSTHGLMKDTDRKTLTNMVYQLIDNGLLDRTDEDYPVLRLNDASR
                     EVLKGQRTVKLLQPKIKAKVKKSRYDEQSWQNVDEGLFESLRALRRKLADQRGVPAYV
                     LFNDATLRDMARTRPGSASALLNIRGVGEKKLTDIGQPFLDVISNYCREKRLELDL"
BASE COUNT          693 a          976 c          841 g          613 t
ORIGIN      
        1 gcatcgcccg tcacctttgc ggccttggca tctttgcgag agatattccg agttccggac
       61 aaaggcgtaa tgaagaaatt tccccatgag cggcaacgac atcatcttcg aacagattcg
      121 ctccagcggt tgcctctcct atgtgctcgg ctgtgcccag gagaaaactt gcatcgtcat
      181 cgaccccgag atcgataagg ccgacgacta cgccagcctg gtaaaattct tcggggcgaa
      241 actagtctac gccatcgata cccatacgca cgccgaccac aactcggcgt gtaagctcat
      301 gcgcgaacga tacgacgtca aagtcgtcat gcatcgcgcc accgacgcgc cttacgtcga
      361 tgtcagagtc gaggacgggg aggaaattcg ctttggcaca cagagtttaa aagtcatctt
      421 tacaccgggt catacccaag acgccatgtg tctgttgttc aacgatcgaa tcttcaccgg
      481 cgacactttg ctcatcggcg gctgcggccg tacggatttg cccggcggca gcgctgaaca
      541 gcaatgggac agcctgcgcc gcttgcatgc gctcggcaac gaactccgcg tctatcccgg
      601 ccacgactat cgcgaagcgg tgtcgaccct cggcgacgaa aaacaaaaaa acccgcgcct
      661 gaccatcccg tcgcgcgacg aattcatcca gttcatgacc tcgcgccatc ctcccctgcc
      721 acgcaagatc caagaagcgc tggagtggaa ccgcacgccg atctaccggc agcgcggctt
      781 gggggaaggg atctgaagta tttcaaatta cagcttccaa attccaaatc ggtttcctta
      841 atctcattct tactgctact tgatccccgt tgcctcgact tcactgcatt gactctagaa
      901 cgtatctcgt gttttgaatg atggtgtgaa acgcgagcca tcaaacacag attcggcaaa
      961 tcccgacatc ctcgaaaccc tgcgccgtta ctggggctac aacgagctgc gaccgctgca
     1021 agaacaggcg atcctggcgg agttgtcgca ccgcgactcg ctggtcgtca tgcccaccgg
     1081 cggcggcaag tcgctgtgct accagatccc cgccgcggtg gcgaagcgca ccgatattgt
     1141 catctcgccg ttgatctcgc tgatgaaaga tcaggtcgac ggtctgcgcg aatgcggcta
     1201 tcccgccgct accctttaca gcggcatgcc gccccacgcc gtgcacgaga ctgaagcgca
     1261 gtttctcgcc ggccgctatc gtttgctgtt cgtcgcgccg gagcgcttgc taacgccgca
     1321 cttcatggaa ctcgccgaaa aaatcaaaat tcacgccttt gccatcgacg aagcgcactg
     1381 catcagccat tggggccacg acttcagacc cgaatatcgc cgcctcgccg aactgaaaaa
     1441 acattttccc aaggccagcc tgcatgccta caccgcgacg gctacagaga gagtccgcct
     1501 tgacatcgcc cagcagttga aactgcgcaa tcccgagctg ctggtcggca ccttcgaccg
     1561 gcccaacttg gtttatcgca tcgtgccgcg ggtcgacgcc cgcgcgcaag ttttggaaat
     1621 tctcaagcgc cacgccaatc aagcggcgat cgtctactgc ctgagccgca acgataccga
     1681 gtcgatggcg tcatttctcc aatccaataa aattcgcgcg gcccattatc acgccggcat
     1741 ggaacccgag cagcgccggc gcacccagga agagttcgcg tccgaagccc tcgacgtggt
     1801 cgcggccacc gtcgccttcg gcatgggcat cgaccgcagc gacgtccgct gcgtcatcca
     1861 cgctgccatg ccgaagtcgg tcgagcacta tcaacaagaa accggccgcg ccggacgcga
     1921 cggtctggaa gcggaatgcg tgctgctgta ctccgccgcc gacgtgctgc gctgggactc
     1981 gctgatcacg cgcaatgcga cggacgccga ctccactccg gaaaccatcg ccgcctcgcg
     2041 ccaactgctc gatcacatgc gccagatctg cagcggcgtg cactgccgtc ataagaagct
     2101 gtctgaatat tttggccagg cctatccaaa acccaattgc gaagcctgcg atgtctgtct
     2161 cagcgaagtc gaaggtctcg ccgacgcgac ggtggcggcg caaaagatcc tttcctgcgt
     2221 cgcccgcgtc ggcgaacgct tcggcatcgc ccatatcgtc gatgttctgg ccggcgccaa
     2281 caccgagcgg gtgcgccgct gggaacacga aaagctcagc acccatgggc tgatgaaaga
     2341 caccgatcgc aaaactttga cgaacatggt ttaccagctc atcgacaatg gcctgctcga
     2401 tcgcaccgac gaagattatc ccgtgctgcg cttgaacgac gcctcccgcg aagtgctgaa
     2461 aggccagcgc accgtcaaac ttctccagcc gaaaatcaaa gcgaaggtaa aaaagagccg
     2521 ctacgacgaa cagtcctggc aaaatgtcga cgaaggtttg tttgaatcgc tgcgagcgtt
     2581 acgccgcaaa ctcgccgatc aacgcggcgt gcccgcctac gtcctgttca acgacgccac
     2641 cctgcgagat atggcgcgca cgcggccggg ctctgctagc gcactgctga atattcgcgg
     2701 cgtcggtgaa aagaagctga cggatatagg ccagccgttt cttgacgtga tttcgaacta
     2761 ctgtcgggag aagcggttgg agttggattt atgagtcggc agagcggccg gcccggcaaa
     2821 gaggcgatac cgtcatgatc cgagtgaacg cggagagaca gttgtcagcc tagagcggat
     2881 tcaatgccgc ggcgccatcg ggcgccgacg cggtggcttg tcgaagcatc taataatcga
     2941 tcgcagcgaa aatgccattg cacgaatggt aaaaaacggg cgggtgctac tatcccgccc
     3001 tgccggttta atgcttctcg cttaatgcgt cacttcgtac ctgataaata gcttgtgagt
     3061 cgctccggat ggataatctt catcgagtgt ttttatagtt gcggcatttc cgaacctttt
     3121 tcg
//
LOCUS       DATIRS010001126         3648 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1265632, whole genome shotgun sequence.
ACCESSION   DATIRS010001126 DATIRS010000000
VERSION     DATIRS010001126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3648
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1265632"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..530)
                     /locus_tag="VLM90_14400"
     CDS             complement(<1..530)
                     /locus_tag="VLM90_14400"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ14216.1"
                     /translation="MLLLFFALPSQASAQGVSLEAAKKEGKVVVYGTIVPQVMKLIEA
                     GFEAKYGVNIEYWRGDATKVVDRVLTEWRAGRPGFDMVIGARGPLSLAKADGVYAKFT
                     PASAANFPAKFRDKDGQLTAWRVTPVGILTNTDLVKANDVPKSWDDLLDPKWQGKISM
                     PDPSRHASTASFLWNL"
     gene            complement(763..1746)
                     /locus_tag="VLM90_14405"
     CDS             complement(763..1746)
                     /locus_tag="VLM90_14405"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ14217.1"
                     /translation="MRVGLCFDGFYSIQEMIELAQLADDIGMDSIWMSDHLCFRDSFT
                     TAMALLASTNKIKVAAAPASPYSRNPMITAMAIATMDEFAPGRVIGSPGTGNAAALKE
                     AGMESPHPLQTMREYVKILRGYLQGETVNFHGKMFHINGAKMGFVPSTPIKMYITAVR
                     SRMLQLGGEIGDGVLLSAGCAPGYIRKCADDIAVGALKGGKSAESVDVAGFVTAAVSD
                     SAKEAIDANKHFLAYIFRNVHHAENIRLGGGKVDQEGLAAAVAKRDWEAAKNFISDEV
                     VFAHSVAGTPRDCAKQLEAFTKGGLELPIVLPTGTQEARKRVVRMAREIVG"
     gene            complement(1755..2861)
                     /locus_tag="VLM90_14410"
     CDS             complement(1755..2861)
                     /locus_tag="VLM90_14410"
                     /inference="COORDINATES: protein motif:HMM:NF014381.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD/NADP octopine/nopaline dehydrogenase family
                     protein"
                     /protein_id="HSQ14218.1"
                     /translation="MAIKKIAILGAGNGGCAAAADLTLRGFQVRLFSRSESTTVKLGK
                     LGEIELIEGGVSKKAAPFFLSPHLPPVVQGVDLIVVTTPAVGHEYLAKGIGSYLSDGQ
                     QVLLNPGHTGGALHFANLLRQAGCTADVKLCETVTLTYICRMPQFGRVEIYRRTTNLR
                     CAAFPAKRTAALVREIHSVFPNVVPAANVMETGFSNINAVMHPAGMLGNAGWIEKTSG
                     EFLYYREGITPAIGAWIDAVDQERLEIVRRLGLQPLRFVDIFHQAGLTTAEARDTGSA
                     YQAIHHSEPNFTIKAPPSLDHRYIREDVGYGLVPMAEVGKLLGVRTPVMDALITLAST
                     ALGVDFRRDGLTLDKMGLAGIAPQALPALLADGF"
     gene            complement(3091..>3648)
                     /locus_tag="VLM90_14415"
     CDS             complement(3091..>3648)
                     /locus_tag="VLM90_14415"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HSQ14219.1"
                     /translation="NQGYPTAKAAVQIIREMEIYNLLFMEQPVEGIDQMAEVARRVDT
                     PIMADESAWTAQDVIEIIHKKAADVISIYTTKPGGMFKGKKVAAVAEAAGLKCNVNGS
                     VETGVGNAANIHLAASTGVVTYGCVVPVSTPKEKGKGGIAGIYYQDDVITEAFDYADG
                     DVVVSSKPGLGIELDEDKIKHYRIK"
BASE COUNT          732 a         1117 c         1012 g          787 t
ORIGIN      
        1 tggaggttcc acaaaaatga cgccgtgctg gcgtggcgcg acgggtcggg catgctgatc
       61 ttgccctgcc acttgggatc gagcaaatca tcccagctct tcggaacgtc gttggctttt
      121 accaagtcag tattggtgag aatccccacc ggagtgacgc gccaggcggt cagttggcca
      181 tccttgtcgc ggaacttggc gggaaaattc gccgcgctcg ccggggtaaa cttcgcgtag
      241 accccgtcgg ctttggccag cgacaatggg ccgcgcgcgc cgatcaccat gtcgaatcct
      301 ggtctgccgg cgcgccattc ggtcaacacc cggtcgacca ccttggtcgc atcaccgcgc
      361 cagtactcga tgttgacgcc atacttcgct tcgaaccccg cttcgatgag tttcatcacc
      421 tgggggacga tcgtgccgta gaccacgact ttgccttcct tcttggccgc ctcgaggctg
      481 acgccctggg ccgaagcttg cgacggcagc gcgaaaaaga gcaaaagcaa agttagcaag
      541 gcaccgtgcg caactgaacg cccgctagtt aaaaatctcc cctgtcgcct ctttatcaaa
      601 gaggggtaat cctcgctccc atccgatatc cccctttgaa aaagaaggac caagggggat
      661 tttcttttga cagcaacgaa agtttccatg tgcacctcta ttcaataaat tgttatgcgg
      721 tttaaacgat cgctttcaga aataatatcg cgctaataat tattatccaa cgatctcgcg
      781 ggccatgcgc accacccgct tacgcgcctc ctgggtgccg gtgggcagca cgatcggcag
      841 ctccagtccg cccttggtga aagcttcgag ctgcttggcg cagtcccttg gcgtgccggc
      901 caccgaatgg gcgaagacaa cttcgtcgct gatgaaattc tttgccgctt cccagtcgcg
      961 ttttgccacc gctgcggcga gtccttcctg gtcaaccttg ccgccgccca ggcgaatatt
     1021 ttcggcgtgg tgcacgttgc gaaaaatata ggcgagaaaa tgtttgttgg catcgatggc
     1081 ttccttggcg ctgtccgaca ctgccgccgt gacaaagccg gcgacatcga cactctcggc
     1141 ggacttgccg cccttgagag cgcctacggc gatgtcatcg gcgcatttgc ggatgtagcc
     1201 aggcgcgcat ccggccgaga gcaaaacgcc gtcgccgatc tcgccgccca attgcagcat
     1261 gcgtgagcgc accgcggtga tatacatttt aatcggcgtc gacggtacga aacccatctt
     1321 ggcgccgttg atgtgaaaca tcttgccgtg aaagttgacg gtctcgcctt gcaaataacc
     1381 gcgcaaaatc ttcacatact cgcgcatggt ttggagcgga tgaggcgact ccatgccggc
     1441 ttccttgagc gccgccgcgt tgcctgtgcc ggggctgccg atcactcggc ccggcgcgaa
     1501 ttcgtccatg gtcgcgatcg ccatcgccgt gatcatcgga ttgcgcgaat aggggctcgc
     1561 cggcgcagcc gccactttga ttttgttggt ggacgcgagc agcgccatcg cagtggtgaa
     1621 ggaatcgcga aagcatagat gatccgacat ccaaatcgaa tccatgccga tatcgtcagc
     1681 cagttgcgcc aactcgatca tctcttggat cgaataaaac ccgtcaaagc aaagtccgac
     1741 acgcataaga actcctaaaa gccatcggca agcagtgccg gcagcgcttg cggcgctatg
     1801 ccagcgagcc ccatcttatc cagggtcaat ccgtcgcggc gaaaatccac cccgagcgcc
     1861 gtcgacgcca gcgtgatcag cgcgtccatc accggggtcc tgacgcccag cagtttgccg
     1921 acctccgcca tcggcaccag tccatagccg acatcttcgc gaatatagcg atgatcgagc
     1981 gacggcggcg ctttgatggt aaagttaggc tcgctgtggt gaatcgcctg atatgcggaa
     2041 ccagtatcgc gcgcttcagc ggttgtcagt ccggcctggt gaaaaatgtc gacgaagcgt
     2101 agcggttgta agccaagccg tcggacgatt tctagtcgct cctgatcgac ggcgtcgatc
     2161 catgcgccga tcgccggcgt gatgccctcg cggtaataga gaaactcgcc gctggtcttt
     2221 tcaatccagc ccgcgttgcc gagcatgccc gctggatgca tgaccgcatt gatattggaa
     2281 aaacccgtct ccatcacatt ggcagccggg acgacgttgg gaaagacgct gtgaatttct
     2341 cgcaccaacg ccgccgtgcg cttagccggg aatgccgcac aacgcaggtt ggtcgtgcgc
     2401 cggtagattt ccactcggcc gaactgcggc atgcggcaaa tgtaagtgag cgtcaccgtc
     2461 tcgcaaagct tcacgtcagc cgtgcaacca gcttggcgca acaagttggc aaagtgcagc
     2521 gcgccaccgg tgtggccggg attcaaaaga acctgctgac cgtcgcttaa gtagctgccg
     2581 atgcccttgg ctaaatactc gtggccgacc gccggcgtcg tgacgacgat cagatccacg
     2641 ccctgcacca ccggcggcaa atgcgggctc aagaaaaacg gcgcggcctt cttgctcacg
     2701 ccgccttcga ttaattcgat ttcgccgagc ttgccgagtt tgaccgtggt gctttccgaa
     2761 cgcgagaata gacggacttg aaaaccgcgc aacgttagat cggcggcggc cgcacagccg
     2821 ccgttgccgg cgccgagtat cgcgatcttc ttgattgcca tagaactaga gaattggaat
     2881 tacctaaccg atcactcccg atcgtcattt gcgcgcaggc gcgaatcccg gttctgcgcc
     2941 aacgccccgc tcctctcgtc atgccggcgc aggccggcat ccatcttcgt ttccagtgcg
     3001 ccgccccacc tggataccgg cgtgcgccgg tatggtagaa cttccttgtg cggatttatc
     3061 gttggttgag tcattcaaag aagcggcaac ctacttaatc cggtaatgtt ttatcttatc
     3121 ttcgtccagc tcgatgccga gcccaggctt ggatgagacg acgacatcgc cgtcggcgta
     3181 gtcgaacgct tcggtgatga catcgtcttg atagtaaatg ccggcgatgc cgcccttgcc
     3241 tttttccttc ggcgtcgaca ccggcacgac gcaaccgtag gtcaccacgc cggtggatgc
     3301 cgcgagatga atgttcgcgg cattgcccac tccggtttcc accgaaccgt tgacgttgca
     3361 tttcaaaccc gccgcctcgg cgacggcggc gacctttttg cctttgaaca tgccgcccgg
     3421 tttggtcgtg tagatcgaga tcacatcggc ggctttcttg tgaatgatct cgatgacatc
     3481 ctgcgccgtc caggcgcttt catcggccat aatcggcgta tcgacgcggc gcgccacttc
     3541 ggccatttga tcgatgcctt ccaccggctg ttccatgaag aggaggttat atatttccat
     3601 ctccctaatg atctgcaccg cagctttggc cgtcggataa ccttggtt
//
LOCUS       DATIRS010001127         1705 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_380102, whole genome shotgun sequence.
ACCESSION   DATIRS010001127 DATIRS010000000
VERSION     DATIRS010001127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1705)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1705)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1705
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_380102"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            237..>1705
                     /locus_tag="VLM90_14420"
     CDS             237..>1705
                     /locus_tag="VLM90_14420"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein"
                     /protein_id="HSQ14220.1"
                     /translation="MRYAADIHFPAALSAKILRTSLPHALILGIDTSTAAKLAGVRAI
                     ITGADVAGVMVGLRMKDMPLLATDRVRYSGEPVAAVAADNDEIAEEALNLIDVQYQAL
                     SFVTDPVEAIRPGAPVLHENPSAYKNAHYREIDLPNVQSYGKWTNGDVEAGFKNAARI
                     FEHTFRTPLGFHGYIEPHACTVQINDDGRVEIWASNKAPFTLRSRFARDLALEEAKVK
                     VHILPVGGDFGGKTSVVEAPVCYFLAKKAGKPVRMILEYTEELTAISHRHPAVITLRT
                     GVDADGTLCALHARAFFSGGGYAALKANAEVTVQGPRRVASYYKIPAIQVETLCAYTN
                     QVPCTQTRTPGSPQTTFAMESQIDIIARELGVDPVEFRMKNLLNDGDPTPFGQKLKGI
                     VVKETLKKALDTAGWKKPKANNIGRGVAVYERPSGAGKSGAAITIEADGGVRVHLGVP
                     DVGPGIHTVVQQIVSEVLDVPMARVDIRVENTDSSPFDSG"
BASE COUNT          391 a          498 c          496 g          320 t
ORIGIN      
        1 tctctcgaat gtcattctga agctgagccg aagaatctgc ttttgcttgt ttgctgcctc
       61 atgcaaaaaa agccgtttgg acggatcgaa cgaaagaaga accggcgcta ttccctcagg
      121 atgacggagt aaagagagaa aagtaacgaa gacaacactg gagaaaacat atggcgttca
      181 agagcgtaaa caagtcagta ccgcgaattg aaggagcgga caaagtctca ggcaagatgc
      241 gctatgctgc ggatatccat tttcccgcgg cgctatcggc aaagatcctg cgcacttcgc
      301 tcccccatgc gcttattctc ggcatcgata cgagcacggc ggcgaaacta gcgggcgtgc
      361 gcgcgatcat caccggcgcc gatgtcgcag gtgtgatggt cggcttgaga atgaaggaca
      421 tgccgctact agccactgat cgtgtgcgct actccggcga gccggtcgcg gcggtggcgg
      481 cggacaacga tgaaattgcc gaggaggcgc tgaatctcat cgacgtgcag taccaagcgc
      541 tgtcgttcgt caccgatccg gtcgaagcga tacgccccgg cgcgcctgtg ctgcatgaga
      601 atcctagcgc atacaagaac gcgcactatc gcgaaatcga ccttcccaac gtgcagtcct
      661 atggcaagtg gacgaacggc gacgtcgaag caggtttcaa aaacgccgcg cgcatcttcg
      721 agcatacttt tcgcacgccg ttgggatttc acggttacat cgaaccgcat gcttgcaccg
      781 tgcaaattaa cgacgatggt cgcgtcgaga tttgggcgtc gaataaggct ccgttcactt
      841 tgcgcagccg cttcgcgcgc gatctcgctc tcgaagaggc gaaagtcaaa gttcacattc
      901 ttccggtcgg cggcgatttc ggcggcaaga cctccgtggt cgaagcgccg gtctgctact
      961 ttctcgccaa gaaagccggc aagccggtgc gcatgattct cgagtacacc gaagaactga
     1021 ccgcgatctc ccatcgccac cccgcggtga ttacgttgcg cacgggcgtc gatgccgacg
     1081 gcacactctg cgcgctgcac gcgcgagcgt tcttcagcgg cggcggctat gcggcgctca
     1141 aggccaatgc cgaagtaacc gttcaggggc cgcgccgtgt tgcgagttat tacaaaatac
     1201 ccgccattca agtggaaaca ttgtgcgcct ataccaacca ggttccatgc acccagacgc
     1261 gtactccggg cagcccccag acgacattcg ccatggagtc gcaaatcgac attatcgccc
     1321 gcgagctggg cgtagacccg gtcgagtttc gcatgaagaa cctgcttaac gacggcgacc
     1381 cgacaccgtt cggccagaaa ctaaaaggca tcgtcgtcaa ggaaactctc aaaaaggcgc
     1441 tcgacaccgc cggctggaaa aaacccaagg caaacaatat cgggcgcggc gtcgccgttt
     1501 acgagcgacc ttcgggagcg ggcaagtccg gcgctgcgat cacgatcgaa gcggatggcg
     1561 gcgttcgcgt gcatttgggc gtgcccgatg tcggtcccgg cattcacacc gtcgtccagc
     1621 agatcgtgag cgaagtgctc gatgtcccga tggcaagggt cgacattcgc gtggaaaaca
     1681 ccgacagctc gccgtttgat tcggg
//
LOCUS       DATIRS010001128         1550 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_773593, whole genome shotgun sequence.
ACCESSION   DATIRS010001128 DATIRS010000000
VERSION     DATIRS010001128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1550
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_773593"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1550
                     /locus_tag="VLM90_14425"
     CDS             <1..>1550
                     /locus_tag="VLM90_14425"
                     /inference="COORDINATES: protein motif:HMM:NF040438.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase domain-containing protein"
                     /protein_id="HSQ14221.1"
                     /translation="QPLRGKVRQEFIADRKGVLSMPVSGAANIQCYPVLDRATATLTL
                     REKEADPRVAVPASEWELAKAKDVDGKIELKPSNVDLYVKSGFKTGWIYELIYDTEGS
                     RVMGLGFLGLRDLVSFLRHGSKDSAGAANPLANSIDKVYGYGASLAGRVVREFVYEGW
                     NRDAEERRVFDAVQTHTGIGRLYFNMRFAQIGRYPRQHEEHSYPSERYPFNFASIPDP
                     FSERNDGVMKRPDTEPLLVHCHTSSEYWERHGSMTHTDPRDGSDAPIPANVRMYMLAG
                     SPHAAIAADNPKWVGQLPPSNFSPQPFLRACFVLMDRWASQGVPPPPSRVPRRSEGQL
                     VTPEEALKKFPKIPGVNLPATPSRLPLWNYGPDFDDRGIMSIFPPEAVPGKEYPIQVP
                     QVDADGNDLGGVRYPDMQAPIATYIGWALRKAGFAEGELMMTNGCIKAFARTQAEREK
                     TGDPRLSIEERYPSHQAYFDIVKHAVDDLVKEGFLLPEDGESYIEAAKKKNPLDPSVV
                     IEPLVTAG"
BASE COUNT          321 a          478 c          471 g          280 t
ORIGIN      
        1 ccagccgctg cgcggcaaag tgcgccagga atttattgcc gatagaaaag gcgtgttgtc
       61 gatgccggtg agcggcgctg ccaacataca atgttatccc gtgctcgatc gcgccacggc
      121 aacgttgacg ctgcgcgaga aagaagccga cccgcgggtg gcggtgccgg cgagcgagtg
      181 ggagttggcc aaggccaaag atgtcgacgg caagatcgaa ctcaagccct ccaatgtcga
      241 tctctacgtc aaaagcggtt tcaaaactgg atggatctat gaactgattt atgacaccga
      301 agggtcgcgg gtgatggggc taggctttct cggcctgcgc gatctggttt ctttcttgcg
      361 ccacggcagc aaagattccg ccggcgcggc gaatccgctc gcgaactcga tcgataaagt
      421 gtacggctac ggcgcttcgc tggccgggcg ggtcgtgcgc gagttcgtct acgaaggatg
      481 gaaccgcgac gccgaagagc gccgtgtttt cgacgcggtg cagacccata ccggcatcgg
      541 ccgcttgtat ttcaatatgc gcttcgccca gatcggccgc tatccgcgcc agcatgagga
      601 gcattcttat ccgtcggagc gttatccatt taacttcgcg tccatccccg atccgttcag
      661 cgaacgaaac gacggcgtga tgaagcgccc agacaccgaa cccttgctcg tgcactgcca
      721 cacctcgagc gagtactggg agcgccatgg ctcgatgacc cacaccgatc cgcgcgatgg
      781 cagcgacgcg ccgattccgg ccaacgtgcg catgtacatg ctcgccggct cgccgcacgc
      841 ggcgatcgcc gccgacaatc cgaaatgggt cggccagttg ccgccgagta atttttcgcc
      901 gcagccgttt ttgcgcgcct gcttcgtgct catggaccgc tgggcaagcc aaggcgtgcc
      961 gccgccgccg agccgcgtgc ctcgacgctc cgagggacag ttggtaacgc ccgaggaggc
     1021 gctgaagaaa ttccccaaaa ttcccggcgt caatctgccc gcgacgccga gccggttgcc
     1081 gttgtggaac tacggccccg acttcgacga ccgcggtatc atgagcattt tcccgcccga
     1141 ggcggtgccg gggaaagagt atccgatcca ggtgccgcag gtagatgccg acggcaacga
     1201 tttgggcggc gtgcgctatc cggacatgca agcgccgatc gccacgtata tcggttgggc
     1261 gctgcgcaaa gccggcttcg ccgaaggcga gttgatgatg accaacggct gcatcaaagc
     1321 cttcgcgcgc acccaagccg aacgcgaaaa gaccggcgac ccgcgcttgt cgatcgaaga
     1381 acgctatcca agccatcagg cgtatttcga catcgtcaaa cacgccgtcg atgacttggt
     1441 caaagaaggt tttttgctgc ccgaagacgg cgagagctac atcgaagcgg ccaagaaaaa
     1501 gaatccgctc gacccttcag tagtaataga acctctggtc accgccgggc
//
LOCUS       DATIRS010001129         1994 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1167479, whole genome shotgun sequence.
ACCESSION   DATIRS010001129 DATIRS010000000
VERSION     DATIRS010001129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1994)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1994)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1994
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1167479"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..184)
                     /locus_tag="VLM90_14430"
     CDS             complement(<1..184)
                     /locus_tag="VLM90_14430"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14222.1"
                     /translation="MLAKTLMIQGTGSSVGKSILVTALCRIFKQQGLSVAPFKAQNMS
                     LNSFVTAAGDEIGRAQV"
     gene            complement(207..1001)
                     /locus_tag="VLM90_14435"
     CDS             complement(207..1001)
                     /locus_tag="VLM90_14435"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ14223.1"
                     /translation="MTSTSALEVRNLSFGYNGGLLLNNLSFAITAGELIALIGPNGSG
                     KTTLLKILLGLLAPNSGTVTLHGQALSTYHPKARAKTIAYVSQQPALSFPLTARELVS
                     LGRYPHGARGKESNADKHAIANALERTAAIELSDRQFNTLSGGEKQKVLIARALAQSA
                     RVLLLDEPTQHLDLYYQLQILSALKRLCVDERITVITVLHDVNLASLFADQALLLSGG
                     ALRCFGPVTEVINEASIKALLDVDMTAIAGTDSRPRYFVPRDPNSK"
     gene            complement(1006..>1994)
                     /locus_tag="VLM90_14440"
     CDS             complement(1006..>1994)
                     /locus_tag="VLM90_14440"
                     /inference="COORDINATES: protein motif:HMM:NF013219.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HSQ14224.1"
                     /translation="DGAQVSRRSLTFVLLSALILAAILFGLSIGPVPISFLELSETDK
                     EILVNLRLPRVLSAFLVGGGLALAGAIFQGLFRNPIADSYLLGVSSGASLGAAAAIVF
                     KLASPLASFAAVSVFAFAGSLTALALVFYFGHRQGGFSIFRLLLSGLGVGLFLSSLVA
                     IFMLMAGEELKALIFFFLGGFSTSSWDTTWVSLACIPLAALTACYFAPELNLLLLGEE
                     TAQSSGVRTGRIQLIFAIVAALLTSISVSVAGLIGFVGLIVPHMIRLSFGADHRTLLP
                     LTFFSGGIFLVLCDAAARTVMAPAELPVGIVTSLVGVPIFLYMIRKESSDLG"
BASE COUNT          471 a          529 c          632 g          362 t
ORIGIN      
        1 ccacttgggc gcggccgatc tcgtcgccgg cggcggtgac gaaggagttg agcgacatgt
       61 tttgcgcctt gaacggcgcg acgcttagcc cttgctgttt gaaaatccgg catagcgctg
      121 tgactagaat gcttttgccg accgatgaac cggttccttg gatcattagc gttttggcga
      181 gcatgtttgt gcgttcgggt gggagatcac ttggaattgg gatcacgcgg cacgaagtag
      241 cgcgggcgcg aatcggtgcc ggcgatcgct gtcatgtcga cgtccagtag cgctttgatg
      301 ctggcttcgt tgatgacctc ggtgacggga ccgaagcagc gcagcgcacc gccgctcaac
      361 agcagcgctt ggtcggcgaa tagcgaagcc agattgacgt catgcaggac ggtgatgacc
      421 gtgattcgct cgtcaacgca cagccgtttc aatgccgaga gaatttgtag ttgataataa
      481 agatcgaggt gctgcgtagg ctcgtctagg agtaagaccc gagccgattg agccaaggcg
      541 cgggcgatca agactttctg cttctcgcca ccgctcagcg tgttgaactg ccgatcgctt
      601 agttcaatcg ccgcggttct ttctaacgcg ttggcaatgg cgtgtttgtc ggcgttcgat
      661 tccttgccgc gcgcgccatg gggataacgg ccgagggata ccagctcgcg tgcggtcagg
      721 ggaaagctta gtgcgggttg ctgggaaaca taggcgatgg ttttcgctcg cgctttgggg
      781 tgataagtcg acagggcttg gccgtgcagc gtcaccgtgc cggagttcgg cgccagcagg
      841 ccgagcaaga ttttcagtag cgtggttttg cccgagccgt tggggccgat tagggcgatg
      901 agttctccgg cggtgatggc gaacgaaagg ttatttaaca acaggccgcc gttgtagccg
      961 aaggagaggt tgcggacttc gagagcgctc gtcgatgtca tgttatcaac ccagatcgct
     1021 ggattccttg cgaatcatgt agagaaaaat cggcacaccg accaacgagg tgacgatgcc
     1081 gacgggcagt tccgccggcg ccatgacggt gcgcgccgcg gcgtcgcaga gcacgagaaa
     1141 gatcccgccg gaaaaaaatg tcagcggcaa caaagttcga tgatcggcac cgaaactcaa
     1201 gcgaatcata tgtggcacaa tcaatccgac aaacccgatc aagcccgcca ccgataccga
     1261 aatcgacgtt aacaacgccg caacaatggc gaagatgagt tgaatgcgac cggtgcgaac
     1321 cccgctgctt tgcgccgtct cctcaccgag cagcagcagg tttaactctg gcgcgaagta
     1381 acaggcggtg agcgcggcga gcggaatgca cgcgagggaa acccaggtgg tatcccaact
     1441 ggaggtggaa aagccgccga gaaagaaaaa aatcagcgct ttcaattctt cgccggccat
     1501 cagcatgaaa atggcgacca acgatgaaag aaacaggccg acgcccaaac ccgagagcag
     1561 caaacgaaag atcgagaatc cgccttggcg atggccgaaa tagaaaacca atgcgagggc
     1621 ggtcagcgat ccggcaaaag cgaagacact gacggcggcg aagctcgcca gtggcgaggc
     1681 aagtttgaac acgatcgccg ccgccgcgcc caatgacgcg ccggaggaga cgccgagcag
     1741 gtagctatcg gcgatgggat tacgaaagag accttggaag atcgccccgg cgagggctaa
     1801 gccgccgccc accaaaaagg ccgagaggac gcgcggcagg cgcagattga ctaagatttc
     1861 tttgtcggtc tcggacagtt ccagaaatga gatcggcacc ggaccgatgc tcaagccaaa
     1921 caggatggcg gccaaaatga gtgctgataa cagcacgaac gttaagctgc ggcgactaac
     1981 ttgggctccg tccg
//
LOCUS       DATIRS010001130         3835 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_182400, whole genome shotgun sequence.
ACCESSION   DATIRS010001130 DATIRS010000000
VERSION     DATIRS010001130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3835)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3835)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3835
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182400"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..463
                     /locus_tag="VLM90_14445"
     CDS             <1..463
                     /locus_tag="VLM90_14445"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14225.1"
                     /translation="VIQATLLDAANSYRAQKEGFNKLAAAGDYVNEYLSGGIVTSAER
                     IKQAPDKIARFMTAALKGYLFFTSRREPSINYMMQFLKTKDRDAVSAIYDASVKVMTR
                     DGIVDETVLQAVVDEAQRAASVKKEVRTADYFDFNYLRKAREQLKASGWRP"
     gene            complement(635..1561)
                     /locus_tag="VLM90_14450"
     CDS             complement(635..1561)
                     /locus_tag="VLM90_14450"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ14226.1"
                     /translation="MREAKNERSVIWYAPMNRESLREFTSAFEADYPCLKVEVLTGGP
                     QSLLNRIMTEYRAGRYNYDTMNVRSLALYTLKKANAVMRYDTPNRRALRAGFTDKEGY
                     LNGIWASLLVYLYNNKQVTRAQAPKSIDDLLQPRWKGKLGMDKDADDWLAAIMDYYGD
                     ERGKQIARSLGAQQLNIRKGRTLVSQLVAAGEFPAQIDAHHHEAVALKKAGAPIDYLF
                     PEPFVPVKAVSTFVLAARPPHPHAAALLIDFMLSKKGQEIAYRQTRWPAHKDLATGAT
                     DEVGNRKTLVPDSDKWGARYEELVQLTALLER"
     gene            complement(1730..2230)
                     /locus_tag="VLM90_14455"
     CDS             complement(1730..2230)
                     /locus_tag="VLM90_14455"
                     /EC_number="1.5.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016646 - oxidoreductase activity, acting
                     on the CH-NH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HSQ14227.1"
                     /translation="MLKELALGNAYRVTPTGLYLISTAYQGKRNVQFAFRALGLTDDP
                     PLLVIGIQADNFSREVIQQSGEFVVNVCAQNQMHAVNKSRGLSGRTVEDKFAALGLET
                     LPAKHVQAPLVAGCHANVECKLVNSMELDGLYLFVGQALASYIDDQVQPVGRLAGKTF
                     RLDEPI"
     gene            complement(2249..3085)
                     /locus_tag="VLM90_14460"
     CDS             complement(2249..3085)
                     /locus_tag="VLM90_14460"
                     /inference="COORDINATES: protein motif:HMM:NF025091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HSQ14228.1"
                     /translation="MNDQQKRARLRELLSDSKGAIAPGVTDALFARLAQDCGFNAAHL
                     SGNAIHKNFCLPDRNLLTTTQVAQRIGQISEASDIPLIVDGGSICAETIALTRAVKLY
                     ERAGAAAIRFEDAAVNEYGGAADELAIAPAAVVIDQIKAAVDARRDAAFVVIARCDSR
                     PQETLDQVCQRLAAYAAAGADAVGVQLIDVADFRHIGATVATPIVTLWPKAQMSAAEF
                     FALGFRIALTPSSIPLAAVNAAREMLIEMNRQGNDRDYFARQKELAATENWYKKLGTN
                     RK"
     gene            complement(3095..>3835)
                     /locus_tag="VLM90_14465"
     CDS             complement(3095..>3835)
                     /locus_tag="VLM90_14465"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSQ14229.1"
                     /translation="TLGKRNGLNVRQRKRGAVPHTFVQIGGKRMGVYLQNDERPSPSS
                     PRGLPTYSFTTTESGLKELSAELKQLGFNCTGPVSNSHPFAEQTLFFADPAGNHYAVY
                     TPKHACAAASPSTSRMTGVGYMELEAPDVEASIKFYQNVLGFEVQSRSKNPNQATLKM
                     ASGQTLILTEAPFASKGLVMSRKVPGPHIAFYVPTARWTEAIEQLAELGIENGDRGAA
                     KEPSADRGGTYMDDPAGYVIQFITDGME"
BASE COUNT          718 a         1040 c         1202 g          875 t
ORIGIN      
        1 agtgattcag gcgacgctgc ttgacgctgc caatagttac cgggcgcaga aagagggctt
       61 caataaattg gcagccgctg gtgattacgt caatgaatac ctgagcgggg gaatcgtcac
      121 ttcagcggag cgcatcaaac aagcgccgga taaaatcgcg cgcttcatga ccgccgcgct
      181 gaaaggctat cttttcttca cctcgcgccg cgaaccgtcg attaactaca tgatgcagtt
      241 tctaaagacc aaggaccgcg acgcggtgag cgcgatctac gacgccagcg tgaaagtgat
      301 gacgcgtgac ggaatagttg atgagacggt tctgcaagct gtcgtcgacg aggcccaacg
      361 cgcggccagc gtcaaaaagg aagttcgcac ggcggattat ttcgatttca attatttgcg
      421 gaaggcgcgg gagcagctga aggcgagtgg gtggaggccg taagcagctt caccttatca
      481 aagtaacaac ccacgactaa ttcatcgatc ggatagtccc gtatcatttg tagatgtgct
      541 gcgggtttga tcgatggatc tctgcaccgc cgggactcct gtacagaaat agcgaacatg
      601 cttacgttgt tacatttcat tgtgtagctg ttcactaccg ttccaacaac gccgtcaatt
      661 gcaccaactc ctcatacctc gcgccccatt tgtccgaatc gggcactagg gttttgcggt
      721 tgccgacttc gtcggtggcg ccggtggcga ggtctttgtg ggcgggccag cgggtttggc
      781 ggtaagcgat ctcttggcct tttttcgaca gcatgaagtc gatgagcaac gcggcggcgt
      841 ggggatgggg cggacgcgcg gcgagcacga aagttgaaac tgcttttacc ggcacgaacg
      901 gttccgggaa gagataatcg atcggcgcgc cggctttttt tagcgccacc gcttcgtgat
      961 ggtgcgcgtc gatctgcgcg gggaattcgc cggcggcgac cagttgcgag accagcgtgc
     1021 gtcctttgcg gatgttcaat tgctgggcgc cgaggctgcg ggcgatctgc ttgccgcgtt
     1081 cgtcgccgta gtagtccatg atcgcggcga gccagtcgtc ggcgtctttg tccatgccga
     1141 gcttgccctt ccagcgtggc tgtaagagat cgtcgatgga tttcggtgcc tgcgcgcgcg
     1201 tcacctgttt gttgttgtag agatagacga gtagcgaggc ccagatgccg ttcaaatatc
     1261 cttccttgtc ggtgaaaccg gcacgcaggg cgcggcgatt gggtgtgtcg tagcgcatca
     1321 ccgcattggc tttcttcagc gtatagagcg ccaggctgcg cacgttcatg gtgtcataat
     1381 tgtatctgcc ggcgcggtat tcagtcatga tgcggttgag caggctctgc ggcccgccgg
     1441 tcaggacttc gactttgaga catgggtaat cggcttcgaa agcgctggtg aattcgcgca
     1501 gtgactcgcg attcatcggt gcgtaccaga taacgctgcg ctcgttcttg gcctcgcgca
     1561 ccaaggtcgc atgacgttcc gccgctggca gttgattgat cttggcgagg gtttcttcag
     1621 gtgtggcggc gtgcagtttc gcttatagca acactgcgat tgcaaccggg aataacaacc
     1681 gggaagtccg caaacgaatc ggcatggcag tcctccgtta ccggcgaggt taaatcggtt
     1741 catccaggcg aaaagttttt cccgcgagtc ggcccaccgg ctgcacttga tcgtcgatgt
     1801 aggatgccag ggcttggccg acgaaaagat ataagccatc gagttccatg gaattgacca
     1861 gtttgcattc gacgttggcg tggcagccgg cgaccagcgg cgcttgcaca tgctttgccg
     1921 gcaaagtctc caagccgagg gcggcaaatt tgtcttcgac cgtgcgccct gacaggccgc
     1981 ggctcttgtt gacggcgtgc atttgatttt gcgcgcagac gttgacgacg aactcgccgc
     2041 tttgctgaat cacttcgcgg ctaaaattgt ccgcttgaat gccgataacc agcagtggcg
     2101 gatcgtcggt gagcccgagg gcgcggaagg cgaattgcac gttgcgtttg ccttggtacg
     2161 cggttgagat caagtagagt ccggttggcg tgactcggta tgcgttccct aatgccagtt
     2221 ccttcaacat cgtttctccg cgggagaatt attttcgatt cgtaccaagc tttttgtacc
     2281 aattctccgt cgcggccagt tccttttgcc tggcgaagta atcgcgatcg ttgccctggc
     2341 gattcatctc gatcagcatt tcccgcgccg cgttgacagc ggcgagcgga atgctcgatg
     2401 gcgtcagcgc gatgcgaaag ccgagggcaa aaaattctgc cgcgctcatc tgggccttgg
     2461 gccaaagggt aacgatcggc gtggcgacag tggctccaat atggcgaaaa tccgcgacgt
     2521 cgatcagttg gacgccgacg gcgtcggcgc cggccgcggc gtatgctgcc aaccgctggc
     2581 aaacttgatc gagggtttcc tggggacgtg agtcacagcg cgcgatgaca acgaaagcag
     2641 catcacgccg ggcatcgacg gcggctttga tctggtcgat gacgacggct gccggtgcga
     2701 tggcgagctc gtcggcggcg ccgccgtact cattcacggc agcgtcttcg aaacggatcg
     2761 ccgcggcgcc ggcgcgttcg tacaacttta cggctctggt cagggcgatg gtctcagcgc
     2821 agatcgatcc gccatcgacg atcagcggga tatcgctggc ctcagagatc tggccgatgc
     2881 gttgggcgac ctgggtggtg gtcagcagat tacggtcggg caggcaaaaa tttttatgaa
     2941 tggcgttgcc ggaaagatgt gctgcgttga agccgcagtc ttgcgccaag cgggcgaaca
     3001 gcgcatcggt gacgccggga gcgatggcgc ctttcgagtc gctgagtagt tcgcgcaagc
     3061 gcgcgcgttt ttgttggtcg ttcatttggt tcggctattc catgccgtcg gtgataaatt
     3121 ggatgacgta ccccgccggg tcgtccatgt aggtgccgcc tcggtcggcg ctaggttcct
     3181 tggccgcgcc gcggtcgccg ttttcgatgc ccaactcggc tagctgttcg atggcctcag
     3241 tccatctggc cgtaggtaca tagaacgcaa tatgcggtcc tgggactttg cggctcatga
     3301 cgagcccctt cgaggcgaac ggcgcttcgg tcaagatcaa agtctggccg ctggccattt
     3361 ttaacgttgc ctgattcggg ttcttgctgc ggctttgcac ctcgaagccc agcacgttct
     3421 gataaaattt gatcgatgcc tcgacgtcgg gggcttccag ttccatgtag ccgacacccg
     3481 tcatgcgact cgtggacggg ctcgccgcgg cgcaggcatg ttttggagtg tacacggcgt
     3541 aatgattccc cgccgggtcg gcgaaaaata gcgtttgctc ggcgaacgga tggctattgc
     3601 tgactggtcc ggtgcaattg aagccaagct gcttgagctc ggcggacagt tcttttaacc
     3661 ctgattccgt ggtggtgaac gaataggtcg gcaggccgcg cgggctactt ggactcggcc
     3721 gctcatcgtt ctgcagataa acacccatgc gtttgccgcc gatctggaca aacgtgtgcg
     3781 gcaccgcgcc gcgcttgcgc tggcgcacat tgagcccgtt gcgtttgccg agcgt
//
LOCUS       DATIRS010001131         3183 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_182409, whole genome shotgun sequence.
ACCESSION   DATIRS010001131 DATIRS010000000
VERSION     DATIRS010001131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3183
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182409"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..348)
                     /locus_tag="VLM90_14470"
     CDS             complement(<1..348)
                     /locus_tag="VLM90_14470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14230.1"
                     /translation="MAVSTIQTRLCPNCANSIALDTLSCPYCRASLSAAPMPQWPSQD
                     KESPVASVKPAQSAIPLGSKLILVLGVLVFGLGVFLVGGHSERSDLAPLLEAKEKALQ
                     ASEQKLKALEAQLA"
     gene            554..1498
                     /locus_tag="VLM90_14475"
     CDS             554..1498
                     /locus_tag="VLM90_14475"
                     /inference="COORDINATES: protein motif:HMM:NF014476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine cyclodeaminase family protein"
                     /protein_id="HSQ14231.1"
                     /translation="MAVIISEAQTRKLIDMSQAVNLVDKIFRDRAAGKMRNVPRRRLK
                     GSSKQLNMMAAWNQDSDLICLRSYAAGANIVTLFHGGKGGIQGIVNMAYLSSLRTGAA
                     TGVAAKYLAPAGSKVLGIIGPGWQATFQVEAVMETCDIEQIVVWGRTPKRRKDFVKQM
                     SKVVKKVDWKEVDSIDECEGLSDILVVSTDSTTPVATGNNLKPEVLVASIGANATVKH
                     EVSNSLIRRMDLIVTDDIGAAKADSGDLVEACQTRIARWEDILPLEKFVAGGAPQPRP
                     KRIFFQSNGIADEDLAVGKFVLDQAKRKKIKVRNVTEI"
     gene            1653..2729
                     /locus_tag="VLM90_14480"
     CDS             1653..2729
                     /locus_tag="VLM90_14480"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ14232.1"
                     /translation="MATFTGELGLQFVTHLANHYSLRDLVRLAQLGADSGFCQIWVND
                     NIRYRNQMVVLTAIAAQVPIHLGTAIMVPYFHNPLDMADSFAALSELCEGHEISIGIA
                     RGDLGQSPQHVQTQKPIAMVSETTRLLRRALAGEEFPYSDFPFLTEFYRLNPKGKFQL
                     AFKPETEFKFYGGGNGAQALRLCGRIMDGIISSGTYIPMLKAGRLEAMLATADSAALA
                     VEPGKRLRKVCELNVSIAANREQALDFPRRQVAHSILQWEALGFTPEEYAKMGVAREQ
                     VLKLREAFESGATVEQAAVLVTDHMVRCYYAAGKPEEVRDQIIGLVSAAGRLGYDHVA
                     FAKLGPDYDEAIKLLAEQVVPALR"
     gene            complement(2795..>3183)
                     /locus_tag="VLM90_14485"
     CDS             complement(2795..>3183)
                     /locus_tag="VLM90_14485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14233.1"
                     /translation="SNVRVLDGPFDNLALPQDGSLDFVLLHLDYHEIAADVRRGMNAR
                     IFAALKRGGSYGVVDHSAKEGAGDSEAKMLHRMDKLLVIKEATGAGFRLGEEGKMLSR
                     ADDTRDFSVVKIRDRSDRFVLKLVKP"
BASE COUNT          725 a          981 c          881 g          596 t
ORIGIN      
        1 cgccaactgc gcttcgagag ccttgagctt ttgctcgctc gcttgcagtg ctttctcctt
       61 agcttccagt aacggcgcga ggtctgaacg ctcactgtgt ccgccgacga gaaatacacc
      121 cagaccgaag accaagacgc ccaagaccag aataagcttc gagcccaacg gaatcgctga
      181 ttgtgctggt ttaacgctgg ccaccggtga ctctttgtct tgactcggcc actgtggcat
      241 tggcgcggcg ctaagactcg cccggcagta cgggcagctc aaagtgtcca gcgcgatact
      301 attggcgcaa ttgggacaga ggcgggtttg gattgtcgat actgccattg gcatctactc
      361 cacagcgaat ctcgacggaa gccatcgatt ggtcccctcg gatgccgcta actccacatc
      421 attttgcggc gatctggcgg caccgtcaag gcttttgtcg atgagaagtt ggtcaagaca
      481 gaaatgagac aaaaaggata acttgccccg gcaaatttcc tgggctatac aacgctggga
      541 ggattttcta accatggcag tgatcatcag cgaagcacaa actcgtaaac tcatcgacat
      601 gtcccaagcc gtcaacctgg tggacaaaat atttcgcgac cgcgccgccg gcaagatgcg
      661 caacgtgccg cgccgccgcc tcaagggcag ctccaagcag ctcaacatga tggccgcctg
      721 gaaccaggat tccgacctga tctgcctgcg ctcctacgcc gccggcgcca acattgtcac
      781 gctgtttcac ggcggcaagg gcggcattca agggatcgtc aacatggcct acttgagcag
      841 cctgcgcaca ggcgccgcca ccggcgtcgc cgccaagtat cttgcccccg caggtagcaa
      901 agtgctcggc atcatcggcc ccggctggca agcgaccttt caagtagagg ccgtcatgga
      961 aacctgcgat atcgagcaaa tcgtcgtctg gggccgcacg cccaagcggc gcaaggattt
     1021 cgtcaagcaa atgagcaaag tggtcaagaa agtcgactgg aaggaagtcg acagcatcga
     1081 cgagtgcgaa gggctctcgg acatcctggt ggtatcgact gattcgacga caccggtggc
     1141 gacgggaaat aacctgaagc ctgaagtgct agtcgcctcc atcggcgcca atgccacggt
     1201 caagcacgaa gtttccaata gcctgatccg gcgcatggac ctgatcgtca ccgacgacat
     1261 cggcgccgcc aaagccgata gcggcgacct ggtcgaagcc tgccaaaccc gcatcgcccg
     1321 ctgggaagac atcttgccgc tggaaaagtt cgtcgccggc ggcgcgccgc agccgcgccc
     1381 caagcgcatc ttctttcaat ccaacggcat cgccgatgaa gacctagccg tcggcaagtt
     1441 cgtcctcgac caggccaagc gcaagaaaat caaggttaga aacgtaaccg aaatctagcc
     1501 gagcaaacag atagcatcac cacgaaggcg cgaagcccat gaagaattcg caaatcacga
     1561 atttcaaact tcgtgaactt cgtgccttcg tggtgcgaca tccaatccgc taaccagcga
     1621 tcacaaccgg cggcaccgaa cgacagaaac aaatggcaac ctttaccggc gagctcggcc
     1681 tgcaattcgt cacccatttg gccaatcact acagcctgcg cgacctcgtg cggctggcgc
     1741 agctcggcgc cgatagcggt ttctgccaga tttgggtcaa cgacaacatt cgctaccgca
     1801 accagatggt ggtgctgacc gccatcgcag cgcaggtgcc gattcacctt ggcacagcga
     1861 tcatggtgcc ttatttccat aatcccttgg acatggcgga ctccttcgcc gcgctctcgg
     1921 aattatgcga aggccacgag atcagcatcg gcatcgcccg cggcgacctc ggccaatcgc
     1981 cgcagcatgt ccaaactcag aagcccattg ccatggtcag cgagaccacc cggctgctgc
     2041 gccgtgccct cgccggcgaa gagttcccct actccgactt tccttttttg acggaattct
     2101 accgcctcaa tcccaagggc aaattccagc tcgccttcaa gccagaaacc gagttcaaat
     2161 tctatggcgg cggcaatggg gcacaagcgc tgcgcctgtg cggccgcatc atggatggta
     2221 taatcagctc gggaacctac atcccgatgc tcaaagccgg ccgtctcgaa gccatgctcg
     2281 ccaccgccga tagcgcggca ctagccgtag agcctgggaa acgcttgcgc aaggtctgcg
     2341 aattgaatgt ttcgattgca gcgaatcgag agcaagcatt ggattttccc cggcgccaag
     2401 tggcgcactc gatcctgcaa tgggaagcgt tgggcttcac gccggaagaa tacgccaaga
     2461 tgggcgtggc aagagagcag gttttaaagc taagagaagc cttcgagtcc ggcgccaccg
     2521 tcgagcaagc cgccgttctg gtcacagatc acatggtgcg ctgctactac gccgcgggaa
     2581 aaccggagga agtcagagat cagataatcg gactggtcag cgccgccggc cgcttgggct
     2641 acgaccatgt cgccttcgcc aagcttggac cggattacga tgaagcgatc aaattactgg
     2701 cggaacaggt cgtgccggca ctgcgctgac caccggcaag attcaggggc gctgtgagtt
     2761 gccccgatga ctgtcaaaat ttgacttcag ctgcctacgg tttgacaagc ttcagcacaa
     2821 agcggtcgct gcggtcacgg atcttaacga cactgaaatc ccgcgtgtcg tcggcgcggc
     2881 tgagcatttt accttcttcg cccagtcgaa agccggcccc ggtcgcttcc ttgatcacca
     2941 gcagcttgtc catgcggtgc agcattttcg cctcgctgtc gccggcgccc tctttcgccg
     3001 agtgatcgac gacgccgtaa ctgccgccgc gcttgagcgc agcgaagatc cgcgcgttca
     3061 tgccgcgccg aacatcggcg gcgatctcgt gatagtcaag atggagcaaa acgaaatcga
     3121 gagaaccatc ctgaggcagc gcgagattgt cgaacggtcc gtcgagcacg cgcacgttac
     3181 tca
//
LOCUS       DATIRS010001132         1587 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_281686, whole genome shotgun sequence.
ACCESSION   DATIRS010001132 DATIRS010000000
VERSION     DATIRS010001132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_281686"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..557)
                     /locus_tag="VLM90_14490"
     CDS             complement(<1..557)
                     /locus_tag="VLM90_14490"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14234.1"
                     /translation="MKSLFKTATAAVAAALLALPVFGAVNSAPAAELTPANVRMDFII
                     GGKHAPWYVALEKGFYAKRGLAATIQASTGSADTVRTIGSGGADFGFADAATMIVAKS
                     RGTPVQTAAQFGYVGATILWRDEGVIKSIKDLPGKSWAISPGQAQWYLMPAYARINKI
                     DFKAIKIQETAAPIQPAALATKKAD"
     gene            complement(580..1356)
                     /locus_tag="VLM90_14495"
     CDS             complement(580..1356)
                     /locus_tag="VLM90_14495"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSQ14235.1"
                     /translation="MKSSWKNVAEPVVFFLVLLVLWEILVEVIKVPAFILPPPRDLWT
                     AFFKKLPILGHHSLITFIEAFGGFALSLILGVGFAISVVYSRHLQNTIYPLIVILYAM
                     PKSAFAPLMVIWVGYGMFSKISIAFLVAFFPIVVNTVVGLKEVEPELLELARINRGSA
                     WDVFKKIRLPNSLPYMFAGIKVAIVLSVTGAIVAEFVAANEGLGYLVLQANYSLDTAF
                     ALVILLILAVLSLGLFWLAEFCQRKLAPWSAAVREVEGSF"
BASE COUNT          391 a          463 c          437 g          296 t
ORIGIN      
        1 aagtcggctt tcttggtcgc caacgccgcc ggctggatcg gcgccgcggt ttcctgaatc
       61 ttgattgctt tgaaatcgat cttattgata cgcgcgtagg ccggcatcag ataccactgc
      121 gcctggcctg ggctgatcgc ccacgacttg ccggggagat ccttgatgct tttgatcacg
      181 ccctcgtcgc gccacaagat cgtcgctccg acataaccga actgcgccgc ggtttgcacc
      241 ggtgtgccgc gggatttggc gacgatcatg gtcgcggcat cggcgaaacc aaagtcggcg
      301 ccgccggaac cgatggtgcg cacggtgtcc gccgaacccg tgctcgcctg gatcgtcgcc
      361 gccaaaccgc gcttggcgta aaaacctttt tccaaagcga cataccaggg cgcatgcttg
      421 ccgccgatga tgaagtccat gcgcacgttc gccggcgtca gctcggccgc cggggctgaa
      481 ttcaccgcgc caaaaaccgg cagcgccaag agcgccgcag ccacagcagc cgtcgctgtc
      541 ttgaatagcg atttcatcat ttcctccgca attttaaatt caaaacgaac cttcgacttc
      601 gcgcaccgcc gcgctccaag gcgccagttt tctttggcag aactccgcca gccagaatag
      661 gccgagagac aacaccgcga gaatcagcaa aatcaccagt gcgaacgccg tatccaaact
      721 atagttggct tgcaaaacca aatatcccaa gccttcgttg gcggcgacaa actcagcgac
      781 gatggcgccg gtgaccgaca ggacgatggc gaccttgata ccggcgaaca tatagggcag
      841 cgagttgggc aggcggattt tcttaaagac atcccaagcc gagccgcggt tgatgcgcgc
      901 tagctccaac agctcgggct cgacttcttt cagcccgacc acggtattta caacgatggg
      961 aaaaaacgcc accaggaaag cgatggaaat cttcgaaaac atgccataac cgacccagat
     1021 caccatcagc ggcgcaaacg cgcttttcgg catggcgtag agaatcacga tcaatggata
     1081 gatggtgttt tgcaagtggc gtgagtagac caccgaaatg gcgaaaccaa cgccgagaat
     1141 cagcgagagt gcgaagccgc cgaaggcttc aatgaaagtg atcagtgaat ggtggcccaa
     1201 gatcggcagt tttttgaaga acgcagtcca caaatcccgc ggcggcggca agataaacgc
     1261 gggaaccttg atgacttcga cgaggatttc ccacaatacc aataggacga gaaagaagac
     1321 caccggctcg gcgacatttt tccaagaaga tttcatagct gcactccgcg ccgacgttaa
     1381 tggaaagctt cagtggagtc aagaaattgc ccgaggcaat gattttcgcg ggtcaagttc
     1441 gacgcgccac ggtcgatcgc ggcgaattgc gcgatcacag cgatatgtta gaaaagagcg
     1501 caacggttac agcagcagga gcgccatggc acagaataag tttaccgcca ccgcgttata
     1561 cgaagcttgg ccggcgcttt cccgccc
//
LOCUS       DATIRS010001133         2279 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_84685, whole genome shotgun sequence.
ACCESSION   DATIRS010001133 DATIRS010000000
VERSION     DATIRS010001133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2279
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84685"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            122..1315
                     /locus_tag="VLM90_14500"
     CDS             122..1315
                     /locus_tag="VLM90_14500"
                     /inference="COORDINATES: protein motif:HMM:TIGR04053.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04053 family radical SAM/SPASM
                     domain-containing protein"
                     /protein_id="HSQ14236.1"
                     /translation="MDFDQRPFTVVWETTRACDLACIHCRAEARAVRDPSELSFAEAQ
                     GLIQSVKAFGSPYPIFVLTGGDPAKRPDIFAIIEYARSEGLRVAMTPSATPLITRDAV
                     RRFAEAGLIRLAVSLDGKDSAAHDGFRGVSGSFERTLNILDWCREFGLESQIHTTVTR
                     HVLADLPAIAAMIAERGIKLWALFLLIAVGRAARPEIRRLNITAKEIESLFHWLYDLA
                     KSAPFDVTPREGYHYRRVLLQRRAAELAMPVEQLLAEANARSLTPTEVVPNGKAAKIL
                     RAPLGVNDGRGVVFISHTGDVQPSGFLTLVGGNIRSQPLPDIYRSSDVFTRVRDFSQL
                     KGKCGVCEFKSICGGSRSRAYAITGYPMGSDPYCVYQPKAMERKNSHGKSNRRGEIVV
                     RALGA"
     gene            1263..1889
                     /locus_tag="VLM90_14505"
     CDS             1263..1889
                     /locus_tag="VLM90_14505"
                     /inference="COORDINATES: protein motif:HMM:NF013936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HSQ14237.1"
                     /translation="MENRTDAEKLSCAHSAHEATLTASRHHQSDKATALLSDEHRVIE
                     RVLAAVEKLTEKPALASLDSWKKALDFIRHFADQCHHIKEEKVLFPALEEHGIPSDGG
                     PVGMMLTEHEEGRSYVRAMAAAIVLLEAKNDAAAAVLFSSARAYIRLLREHIQKEDEI
                     LFRMADEVISADEQKKLLAAFAQHEAEEMGADVHEKYLQIARELESAA"
     gene            2018..>2279
                     /locus_tag="VLM90_14510"
     CDS             2018..>2279
                     /locus_tag="VLM90_14510"
                     /inference="COORDINATES: protein motif:HMM:NF014997.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HSQ14238.1"
                     /translation="MSEALALPRRSQSVGEEIANAVSHGVGLLLAMIGTLVLVAGAIQ
                     RGGVAEIAGASIFGATMVLAYLTSTLYHALPMNRAKRVFRTLD"
BASE COUNT          465 a          652 c          684 g          478 t
ORIGIN      
        1 agttttccgg tccccctctt tggaaaagag gggctagggg agatttttcg ctgctcgact
       61 ttccgtgtta ggcgattctc acttcactgc cgtggcacgc atcgtgctga gatgtaggtc
      121 aatggacttc gatcagcgac cgtttaccgt cgtgtgggag accacgcggg cttgcgatct
      181 tgcctgcatt cactgccggg ctgaagcccg agctgtgcgc gatccaagtg agctgagctt
      241 tgcggaagcc caagggctga tccaaagcgt caaggcattc ggttcaccct atccgatctt
      301 tgttctgact ggcggcgatc cggccaaacg gccggatatt tttgccatca tcgagtacgc
      361 ccgcagcgaa ggactgcgcg tggcgatgac gccgtcggcg acgccgctga tcacgcgcga
      421 tgcggtgcgc cgtttcgccg aagccggatt gattcgtctc gccgtgagcc tagacggcaa
      481 agatagcgcc gcccacgatg gttttcgcgg cgtctctggc tctttcgagc ggactctcaa
      541 tattctcgat tggtgccgcg aattcggcct ggaatcgcag atccacacca ccgtgacgcg
      601 ccatgtgttg gccgatttgc cggcgatcgc cgccatgatc gccgaacgtg gcatcaaact
      661 gtgggcgcta tttctactca tcgcggttgg ccgggcggcg cgtccggaga ttcgccggct
      721 caatatcacc gcgaaagaga tcgagtcgct gtttcattgg ttatatgatt tggcgaagtc
      781 ggcgcccttc gacgtcacgc cgcgcgaagg ctatcactac cggcgcgtgc tgttgcagcg
      841 gcgcgcggct gaattggcca tgcccgtgga acaattgctc gccgaggcga acgcacggtc
      901 tctgactccg acagaggtcg tgccaaacgg caaggcggcc aagattctgc gcgcgccgct
      961 tggggtcaac gacggccgcg gcgtcgtctt catttctcac accggcgatg tccagcccag
     1021 cggctttttg actctcgtcg gcggcaacat tcgctctcag ccattgccgg acatctaccg
     1081 atcgtcagat gtgtttaccc gcgtgcgcga cttcagccaa ctcaaaggca agtgcggcgt
     1141 gtgcgagttc aaatcgatct gcggcggcag tcggtcgcgg gcttacgcga tcaccggcta
     1201 tccgatgggc agcgatccct attgtgttta tcagcccaaa gctatggaaa ggaaaaatag
     1261 ccatggaaaa tcgaaccgac gcggagaaat tgtcgtgcgc gcactcggcg catgaagcaa
     1321 cactgaccgc cagccgccat catcaatccg acaaagccac ggcgctgctc agcgacgagc
     1381 atcgcgttat cgagcgggtg ctcgcggcag tggaaaaatt gaccgagaag ccggcgcttg
     1441 cgtcattgga ttcatggaaa aaggcgctcg actttatccg ccacttcgcc gatcagtgcc
     1501 accacatcaa agaggagaaa gttttatttc cggcgttgga ggaacacggc ataccgagcg
     1561 atggtggtcc ggtcggcatg atgttgacgg aacatgaaga ggggcgatct tatgtgcggg
     1621 cgatggccgc ggcgatcgtc ctgttggaag cgaagaacga cgccgcggcg gcagttctgt
     1681 ttagcagcgc gcgagcttac attcggcttc tcagggaaca tattcagaaa gaagacgaga
     1741 ttctttttcg catggcggac gaggtgattt ccgccgacga acagaaaaaa ctcttggccg
     1801 ctttcgcgca gcacgaggcc gaagaaatgg gcgcggatgt gcatgagaaa tatttgcaga
     1861 tcgcccggga actcgagagc gccgcgtaac cgagtgggcg tcgagacttc cataggcgat
     1921 cgtcacgttc aaaaaaacct ttgctcgaag gacagcccgc tcgccgagac ccatcggact
     1981 ggttcgtcag ggtgaatagc atttctcata taaagtcatg agtgaagcac tcgctttacc
     2041 tcggcgcagc caatccgtcg gcgaggaaat cgcaaacgcc gtcagccacg gcgtcggttt
     2101 gctgctggcg atgattggca cactcgtcct cgtggcgggc gccattcagc gcggtggcgt
     2161 ggccgaaatt gccggcgcga gtatctttgg tgcaaccatg gtactagcat atctcacctc
     2221 cactctctac cacgcgttgc cgatgaatcg agccaagcgg gtatttcgca ctctcgacc
//
LOCUS       DATIRS010001134         1907 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_479059, whole genome shotgun sequence.
ACCESSION   DATIRS010001134 DATIRS010000000
VERSION     DATIRS010001134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1907)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1907)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1907
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_479059"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(24..938)
                     /locus_tag="VLM90_14515"
     CDS             complement(24..938)
                     /locus_tag="VLM90_14515"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSQ14239.1"
                     /translation="MKWVLAGILLAATFAALPLFTERSDLLNLGVQIFLAIVLAQSWN
                     ILGGYAGQINLGHAAFFGLGALVTRALWVGGTPLVLSLSAGALVATAFGCLIGAPAFR
                     LRGAYFAIGTLGLAEILRITVGNLLPQISTIPASELASYNILPRYYLTLVLAVLCVAV
                     VARLVPSRAGLGIRAVREDEAAAEASGVSALRHKLLALAISTALVGLAGGAFAYYHVS
                     YYQQHTFSPAWTFDAVLMSYIGGVGTVHGPVLGALFYVIVKELLAVKLVEFHLIIFGV
                     LFMLVVLFCPGGLVEAWSRLRRSVSRRA"
     gene            complement(935..1855)
                     /locus_tag="VLM90_14520"
     CDS             complement(935..1855)
                     /locus_tag="VLM90_14520"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HSQ14240.1"
                     /translation="MANSLLLTPYASRLFEMILTQQLILGLLVGGLYGLAAAGLSLTF
                     GVLRVLNVAHGELLMLGGYGTFWLFTLWKIDPFVSLLGVAPAMFLLGMILYWALFQFV
                     VKAHEEVRIKNSLLIGFGLTLVLHALAIRLWTADERAVTTAYAGAVVRLGGLAVPLVR
                     LSSLLFAFAILTGLHLFLARARWGRAIRATAEDWEAAALMGIPVGRTYVLAFALGTAL
                     AGVAGGLVSISYSISPSIGIEWTLKALVVIVLAGLGSLFGSFAGGILLGLAEAMSVVF
                     LGGPYREVVGLILFLVVLVVRPQGLFGARS"
BASE COUNT          499 a          568 c          567 g          273 t
ORIGIN      
        1 ttgaacaatt caacaacagg aatctacgcc cgacgagaaa ctgaccgacg caagcggctc
       61 caggcttcga ccagtccgcc gggacaaaag agcacgacca gcataaacaa gacaccgaag
      121 attatcagat gaaactccac caactttact gctagtaatt cctttacgat cacataaaag
      181 agcgctccga gcaccggtcc gtggaccgtg ccgacgccgc cgatgtagga catcaggacg
      241 gcgtcaaatg tccaagcggg tgaaaaagta tgctgctggt aatagctgac gtgatagtaa
      301 gcgaaggcgc caccggcgag accaaccagc gccgttgaga tggccaaggc caaaagctta
      361 tggcgcaacg cgctcacgcc tgaggcttct gccgccgctt catcctcgcg caccgcgcga
      421 atgccgagac cagcccgaga aggaaccagc cgcgccacca cggcgacgca aagcaccgcc
      481 aagacgagcg tgagataata gcgcggtaaa atattatacg atgcgagctc actagcgggg
      541 atcgtggaga tttgtggcaa caggttgccg accgtgatgc gcaggatctc ggccaaaccg
      601 agggtgccga tcgcgaaata ggcgccgcgc aggcggaatg ccggggcgcc gatcaaacac
      661 ccgaatgccg tggcgaccaa ggcgcccgcc gagagcgata ataccagcgg cgtgccgcca
      721 acccacagcg cgcgcgtgac cagggcgccg agtccgaaaa aagcggcgtg accgaggttg
      781 atctgcccgg cgtagccgcc cagaatattc cagctctgcg ctagcacgat cgcgaggaaa
      841 atttgcacgc caagattgag caaatcgctg cgctcggtga aaagcggcag cgccgcgaaa
      901 gtggcggcga gtaatattcc cgccaagacc catttcatga gcgcgctccg aacagccctt
      961 ggggccgcac caccaaaacg acaaggaata gaatcagtcc caccacctcg cggtagggcc
     1021 cgccaagaaa aaccacgctc atggcttcgg cgagcccgag caggatgcct ccggcaaagc
     1081 tgccgaagag tgatccgaga ccggctagga cgatcacaac cagtgctttc agcgtccact
     1141 caatcccgat ggaagggctg atcgaataag aaatgcttac cagcccgccg gcgacgccgg
     1201 cgagcgcggt gccgagggca aaggcgagca cgtaggtgcg tccgactgga atacccataa
     1261 gagctgcggc ttcccaatct tccgccgtgg cgcgaatggc gcgcccccag cgcgcccggg
     1321 cgagaaacag atgcagcccc gtcaggattg caaaggcgaa taacaaactg ctcaagcgca
     1381 cgagtggaac ggctaacccg ccaagccgga cgacggcgcc cgcgtatgcc gtggtaacgg
     1441 cgcgctcatc ggcggtccag agccggatcg cgagggcgtg cagtaccaag gtgaggccga
     1501 agccgatcaa caaggaattt ttgatgcgca cctcttcatg ggctttgacg acgaattgaa
     1561 acagcgccca atagaggatc attccgagca agaacatggc tggggcgacg ccgagcaggg
     1621 agacaaacgg atcgatcttc caaagagtga agagccaaaa ggtgccgtag ccgccgagca
     1681 tgagcaattc gccgtgggcg acgtttaaaa cccgcaagac accgaaggtc aaggacaggc
     1741 ctgcggcggc caagccatag aggccgccga cgaggagtcc gagaatgagt tgttgggtga
     1801 ggatcatttc aaaaagccgt gaggcgtaag gggtgagtag taaggagttt gccatcccca
     1861 actccttact actaacacct gactcgttac tcagtcatac cgctccc
//
LOCUS       DATIRS010001135         1863 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_970091, whole genome shotgun sequence.
ACCESSION   DATIRS010001135 DATIRS010000000
VERSION     DATIRS010001135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1863)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1863)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1863
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_970091"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..910)
                     /locus_tag="VLM90_14525"
     CDS             complement(<1..910)
                     /locus_tag="VLM90_14525"
                     /inference="COORDINATES: protein motif:HMM:NF012879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HSQ14241.1"
                     /translation="MIAKSGRIVTSPRTWAALWIAPLFLAGALNAEGAAAEPTKRKAA
                     NAKAAAAKQTKPAAKAESAAAKSYDIVFDEFKLKNGLRVLLAEDHRAPTFSICMTYNV
                     GSRDERPGRTGFAHLFEHMLFQGSENVGKGEHFILVQNNGGSANGTTNTDRTNYFETL
                     PANQLELAIFLEADRMRAPAINQANFDNQRLTVQEERRQSYDNRAYGKTYEAVIDLVY
                     DNFPYNHSTIGSMEDLNAATLDDALAFFRTYYAPNNAVLSMVGSFKTEAALALIKQYF
                     ENIPAQPAPAPADMSEPEQKAERRKTV"
     gene            1199..>1863
                     /locus_tag="VLM90_14530"
     CDS             1199..>1863
                     /locus_tag="VLM90_14530"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HSQ14242.1"
                     /translation="MKTSWEKATVDNSPMGMYLAQPEVAGVVPAIIVVQNQDGVAEFT
                     QEMTRRVAAAGYVGIAPQFYHREGEPKTPEATASIKSSRSDANVMSDIDATVHFLKGC
                     AAADTSRLGIVGFCMGGRIAFLGAAATTLFKAAVDFYGGGCYSQWGDRPAPATMAANV
                     CCPVQGHFGELDKNPPPDEMRRLDGELTRLGKTHEFFFYPDTHHGFNRAGGKTYKPDH
                     DATS"
BASE COUNT          374 a          546 c          546 g          397 t
ORIGIN      
        1 cgacagtctt gcgtcgctcg gctttctgct ccggctcgct catgtcagcc ggcgccggcg
       61 ccggttgcgc cggaatattc tcgaaatact gcttgatcaa tgccaaggcg gcttcggttt
      121 tgaaactacc gaccatcgac agcaccgcat tgttgggcgc gtagtaagtg cgaaaaaaag
      181 ccaaggcatc gtccagcgtc gcggcgttca aatcttccat ggagccgatg gtcgaatgat
      241 tgtaggggaa attgtcgtag accagatcga tcaccgcctc gtaggttttg ccgtaggcgc
      301 ggttgtcata gctctgccgg cgctcctctt gcaccgtcaa gcgttgattg tcgaagttcg
      361 cctggttgat cgccggcgca cgcatccggt cggcctcgag aaagattgcc agttccagct
      421 gattggccgg tagcgtttca aaatagttgg tgcgatcggt gttggtcgtg ccgttggcgc
      481 tgccgccgtt gttttgcacc aggatgaaat gctcgccctt gccgacattt tccgagcctt
      541 gaaacagcat atgctcgaac aggtgggcaa agccggtgcg gccggggcgc tcatcgcggg
      601 agccgacatt gtaggtcatg cagatggaaa aggtcggcgc gcggtgatct tcggcgagca
      661 gcacgcgcag gccgtttttg agtttgaact cgtcaaaaac gatatcgtaa gattttgccg
      721 cggcgctctc tgcttttgcc gcaggtttgg tttgcttggc ggcggctgct ttggcgttcg
      781 ccgccttgcg cttggtcggc tcggccgcgg ccccttcggc atttagagcg ccggcgagaa
      841 acagcggcgc gatccaaagc gccgcccatg tccgggggct agtaacaatt ctcccgcttt
      901 tggcgatcat tgcagaaact ccctcgtaac gactcttgtc atgaatttat tactagcatc
      961 attcttggcg acaaggaact tatccgggcc aacggtagtg gttcactttg atttcaacca
     1021 atcccaatgt aggggcagac ccttgtgtct gccctctggg acgggcgacc acaggggtcg
     1081 cccctacaga tgattttgaa actgaaccac tagctggcgc acgcagcgtt tgacagctcg
     1141 cccaagggag gcataaatga agacaaaatc caattgagag gctaagccaa gaattcctat
     1201 gaaaacatcc tgggaaaagg ccactgtcga caatagcccc atgggcatgt acctcgctca
     1261 acccgaagtc gctggcgtcg tgccggcgat catcgtcgtg cagaatcaag acggcgtcgc
     1321 cgagtttacc caagaaatga cccgccgggt cgccgccgcc ggctatgtcg gcatcgcgcc
     1381 gcaattctat catcgcgagg gcgaacccaa gacccccgag gcgacggcga gcattaagag
     1441 tagccgcagt gacgccaacg tcatgagcga catcgatgcg acggttcatt ttctcaaagg
     1501 ctgcgccgcg gcggacacct cacggttagg catcgtcggc ttctgcatgg gcgggcgcat
     1561 cgcctttctc ggcgcggcgg cgaccacgct attcaaagcc gccgtcgatt tctacggcgg
     1621 cggctgttac tcgcaatggg gcgaccgccc ggcgccggcg accatggcag cgaatgtttg
     1681 ctgcccagtg caaggccact tcggcgagct cgacaagaat ccgccgccgg acgaaatgcg
     1741 ccggctcgac ggcgagctca cccgcttggg caaaacccat gagtttttct tctatcccga
     1801 cacgcaccat ggctttaatc gcgccggcgg aaagacttac aagcccgatc acgatgcgac
     1861 ttc
//
LOCUS       DATIRS010001136         2256 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_675364, whole genome shotgun sequence.
ACCESSION   DATIRS010001136 DATIRS010000000
VERSION     DATIRS010001136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2256)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2256)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2256
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_675364"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..212
                     /locus_tag="VLM90_14535"
     CDS             <1..212
                     /locus_tag="VLM90_14535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14243.1"
                     /translation="FNHYYGPTYPPESLIQVWLAHGPPKACAQLIQEWLDMGITTPVL
                     RFTAQDQPGQVTRFVDEVLPLLRMG"
     gene            326..1672
                     /locus_tag="VLM90_14540"
     CDS             326..1672
                     /locus_tag="VLM90_14540"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ14244.1"
                     /translation="MFDDLRDFLGHLEDLGQLKLVKDEVSVKHEIAAGMRKTSDIEGP
                     ALLFENVKNYPDWRVLGGLFATRKLVALGLGVPQDELLERYMTLEDKRIPPEIVATGP
                     CKEIKWTGEQIDLTKLPIVTHASKDCGPYVTIGMQIGKDPDTGIRNLSVHRMLVLGKD
                     RLSLWAPADHHLGRMILKAEENGKGLPVATAVGVEPSIVVASQARVPYGVDEFHVAGG
                     LRGGAVKLVKCETIDVEVPAMAEVIIEGVTIPGERVPDGPYGEYPGCYSDDKQAPVLQ
                     VTAITMRKQPIWQTALTGMPVTENHTLIEYGNAAVVQREVKKIVPEVKGVNMTPGGTF
                     RHHVVVAIKKRAENEGRNVILALLSMGIGLKQVIVVDDDIDPFDPMQVDWAMATRFQA
                     DKDLIVIPRIACSTLDPSCPEARVTAGMGIDATAPLKEHWRFEKVEIPGVDQVKYI"
     gene            1821..>2256
                     /locus_tag="VLM90_14545"
     CDS             1821..>2256
                     /locus_tag="VLM90_14545"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HSQ14245.1"
                     /translation="MKNFDYLEPETVAEACALLKQHGSDAKVFAGGAHLTILMKQGLL
                     EPASLINIKKIAELKGIRFDTSDGLTIGALVTHRELETSALVQEQCPVLCAAEREVAN
                     IRVRNMGTVGGNLASGEALTDLAQIFIALDGKVKIVGPGGQRI"
BASE COUNT          495 a          638 c          701 g          422 t
ORIGIN      
        1 acttcaatca ttattacggc ccgacctatc cgccggagag cttgatccaa gtctggctcg
       61 cccatggtcc gccgaaagct tgcgcacaat taatccaaga atggctcgat atgggcatca
      121 ccacgccggt gctgcgcttc accgctcagg atcagccggg gcaggtgacg cgatttgtcg
      181 acgaggtgct gccgctgttg cggatgggct gaagattgga gtaatggagt actggagtgt
      241 tggagtaatg ggttgcggat ttcctaccca acattccatc actccaatac tccaccactc
      301 caatttggaa gtttgaggtt tttctatgtt tgacgatcta cgagattttc tcggccacct
      361 ggaagacttg gggcagttga agctggtcaa agacgaggtc agcgtcaagc atgagatcgc
      421 cgcgggcatg cgcaagacct cggacatcga agggccggcg ctgctgttcg aaaacgtgaa
      481 aaactatccc gactggcgcg tgctcggcgg tttgttcgcg acgcgcaaac tcgtcgctct
      541 cggtctcggt gtgccgcagg acgagttgct tgagcgctat atgaccttgg aagacaagcg
      601 catcccgccc gagatcgtcg ccaccggtcc gtgcaaggaa atcaaatgga ccggcgagca
      661 aatcgacctg accaagctcc ccatcgttac ccacgcgagc aaagactgcg gcccctatgt
      721 caccatcggc atgcagatcg gcaaagatcc tgacaccggc attcgcaatc tttccgtcca
      781 ccgcatgctc gtgctgggca aggacaggtt atcgctctgg gcgccggccg atcaccatct
      841 cggccggatg attttgaagg ccgaggaaaa tggcaaggga ttgccggtcg ccaccgcggt
      901 gggggtggag ccgtcgatcg tcgtcgcgtc gcaagcgcgg gtgccctacg gcgtcgacga
      961 atttcacgtc gccggcggcc tgcgcggcgg cgctgtgaag ctggtgaagt gtgaaaccat
     1021 cgatgtcgaa gtgccggcca tggcggaggt gatcatcgaa ggcgtgacta tccccggcga
     1081 gcgcgtgccg gacggtcctt acggcgagta tcccggctgt tatagcgatg acaagcaggc
     1141 gccggtgttg caggtgaccg cgatcaccat gcgcaagcag ccgatctggc agaccgcgct
     1201 caccggcatg ccggtgacgg aaaaccacac gttgatcgaa tacggcaacg cggcggtggt
     1261 tcaacgtgaa gtgaagaaaa tcgtgccgga agtcaaaggc gtcaatatga cgccgggcgg
     1321 gacgtttcgc catcacgtcg tggtggcgat caagaagcgc gcggagaacg aagggcgcaa
     1381 tgtcattctc gcgctgttgt ccatgggcat cggtttgaag caggtgatcg tcgtcgacga
     1441 cgacatcgat cccttcgatc cgatgcaagt cgactgggcg atggcgacgc gctttcaggc
     1501 ggataaggat ttaatcgtca tcccgcgcat cgcctgctcg accctcgacc catcctgccc
     1561 cgaagcgcgg gtcaccgcgg gcatgggcat cgacgccacc gcgccgttga aagaacactg
     1621 gcgcttcgaa aaggtcgaga tccccggcgt cgatcaggtg aagtatatat agatatcgga
     1681 ggaaagatat ctcgcgcaaa gggcgccaag gacgcaaagt cggaataggg gatattcacg
     1741 gtgtaggggc aaccccccgt ggttgcccgt ccggagggca ggcacagggc cagcccctac
     1801 agcgaagaac gaacagccta atgaagaact tcgactacct ggaacccgag accgtcgcgg
     1861 aagcttgcgc gctgctcaag cagcatggca gcgacgcgaa agtctttgcc ggcggcgcgc
     1921 atttgaccat tctcatgaag cagggattgt tggaaccggc gtcattaatc aacatcaaaa
     1981 agattgccga gcttaaaggc atccgcttcg atactagcga cggcttgacc atcggtgcgc
     2041 tggtgaccca ccgcgagctc gaaacgtccg cgctggtgca agaacaatgt cccgtgctgt
     2101 gcgcggcgga acgggaagtc gccaacatcc gcgtgcgcaa catgggcacg gtgggcggca
     2161 atctcgcttc cggcgaagcg ctgacggatt tggcgcaaat ctttatcgcc ctcgacggca
     2221 aagtgaaaat cgtcgggccg ggcggacagc ggatta
//
LOCUS       DATIRS010001137         3260 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1659135, whole genome shotgun sequence.
ACCESSION   DATIRS010001137 DATIRS010000000
VERSION     DATIRS010001137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3260)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3260)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3260
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1659135"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(71..472)
                     /locus_tag="VLM90_14550"
     CDS             complement(71..472)
                     /locus_tag="VLM90_14550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14246.1"
                     /translation="MIRLKSVHFFAVLIFLALIGAGQAQNKPLKKVRVGVPSVGVANI
                     IIFIAKEGKLYEKHGLDAEVITVNGSGIGSKALISGLFCACPAPMSARKISTAKKCTD
                     LKRIIESPRHKQLERLEPLKRLEPFQIRSSA"
     gene            complement(538..2286)
                     /locus_tag="VLM90_14555"
     CDS             complement(538..2286)
                     /locus_tag="VLM90_14555"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSQ14247.1"
                     /translation="MPARYGSDLVVDLLKVLGIEYVALNPGSSFRGIHDSLVNYESGR
                     TPNPEMVLCCHEEIAVAVAHGYAKATGKIMPAIVHNVVGLQHASMAIYNAWCDHTPVM
                     VMGGTGPMNSSKRRPWIDWIHTAQVQGNLVRDFVKWDDQPVGVEAFPSSIMRGYRIAM
                     SDPGGPVYLCFDVSDQEAAIEKEIPLPDPSRFRPPAPLQADYDAIKEAAQLLATAQNP
                     VILADYVGRNNDAVISLVALADLLAIPVIDFGARLNFPNTHSLNLTGKNRELIANADV
                     IMGLEMTDLYGALVHSDPNTHANVPATKPGCKVINVTLKDIVVRSWTSDFQELAPVDV
                     PIVANTRVFLPALAEEIRKQGKFSTSVVEDRRKALTAQHEEVHARWQADLKKRWDEKP
                     ISPPRLAWEIWEALKKEDWLLVAGAFRGWPSRLWTWDKPGLFLGGYGGGGLGYGPAAS
                     VGASLPYRGTGKIGVNLQRDGEMLYTPSSLWTAANMGVPLLTVMTNNRVYYNDVEHQE
                     KVAIHRGRPVENKLIGMEMGKPPVDFANLARTFSVHGEGPITEPEQIRPAVERAIKVI
                     KEEKRPALVDVIMQMI"
     gene            complement(2397..>3260)
                     /locus_tag="VLM90_14560"
     CDS             complement(2397..>3260)
                     /locus_tag="VLM90_14560"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ14248.1"
                     /translation="ETDGLSAEVLYPTYLLPQYAMDDAKLQEVTFQAYNDWLIDYCNS
                     SPKRLIGIAAIAVYDIDVAVKELERCAKAGMRGSLIWQAPHPDLPMHSDHYNKFWAAS
                     QDLKMPVHLHILTGHGYHKQTVFGNKRTGVEAYRGSVNLKLKEIIDDFFELIFYGVLD
                     RYPGLKFVSVENEIGWMPFMMQQWDYYYNRFKKVNPPPFTKNPSEYFKTQIYGTFFRD
                     TVAGHNFEWWGQDNCMWSNDYPHGNSTWPESKKYIDRDLGHLPADIRKKLVYTNVKEL
                     YGIDIPHPAVH"
BASE COUNT          658 a          955 c          931 g          716 t
ORIGIN      
        1 attcgtccgg cggtggagcg ggcgatcaaa gtcatcaagg aagagaagcg gccggcgctg
       61 gtcgacgtga ttatgcagat gatctgattt gaaaaggctc cagtcgtttc aatggttcca
      121 gacgttccaa ttgtttatgc cgaggtgact cgatgattcg cttcaagtcc gtacactttt
      181 tcgccgtgct gattttcctg gcgctcatcg gcgcggggca ggcgcagaac aagccgctga
      241 tcagcgcctt ggagccgatg ccggaaccgt tgaccgtgat cacctcggcg tcgaggccat
      301 gcttctcata aagttttccc tccttggcaa tgaagatgat gatgttggcg acgcccaccg
      361 acggcacgcc gacacggact tttttcagcg gcttgttctg cgcctgcccc gcgccgatga
      421 gcgccaggaa aatcagcacg gcgaaaaagt gtacggactt taagcgaatc atcgagtcac
      481 ctcggcataa gcaattggaa catctggaac cattgaaacg actggaacct tttcaaatca
      541 gatcatctgc atgatcacgt caaccagcgc cggccgcttc tcttccttga tcactttgat
      601 cgcccgctcc accgccgggc gtatctgttc cggttcggtg atcggcccct cgccgtgaac
      661 actaaaagtg cgcgccagat tggcaaaatc caccggcggc ttgcccatct ccatgccgat
      721 gagcttgttt tccaccggcc ggccgcggtg aatcgcaact ttttcctgat gctcgacgtc
      781 attgtagtaa acccgattgt tggtcatcac cgtcaagagc ggcacgccca tgttggccgc
      841 tgtccacagg gaactcggcg tgtagagcat ctcgccgtcg cgctgcaggt tgacgccgat
      901 cttgccggtg ccgcgatagg gcagcgacgc gccgaccgac gccgccgggc cgtagcccag
      961 accgccgccg ccgtagccgc cgagaaacag ccccggcttg tcccaggtcc agagccggct
     1021 cggccagccg cggaaagcgc cggcgaccaa aagccagtct tcctttttca aagcttccca
     1081 aatttcccaa gccaggcgcg gcggtgagat cggtttttcg tcccatcgct tcttgagatc
     1141 ggcttgccac cgcgcatgaa cttcctcgtg ctgcgccgtt agcgccttgc gccggtcttc
     1201 gaccacgctc gtggaaaact ttccctgctt ccggatttct tcggcgaggg cgggcagaaa
     1261 cactctggtg ttggcgacga tcggcacgtc caccggcgcc aattcctgga aatcgctggt
     1321 ccagctccgc acgacgatat ctttgagcgt gacgttgatt actttacagc cgggtttggt
     1381 cgcgggaacg ttggcgtgcg tgttcggatc cgagtgcacc agcgcgccgt agagatcggt
     1441 catctccaag cccatgatga cgtcggcgtt ggcgatcaac tcgcgatttt tgccggtgag
     1501 gttcaaggaa tgggtgttgg ggaaattcaa gcgcgcgccg aaatcgatca ccggaatcgc
     1561 cagcagatcg gcaagcgcga ccaggcttat caccgcgtcg ttgttacgcc caacatagtc
     1621 ggccaggatc accggatttt gcgccgtcgc caataactgc gccgcctcct tgatcgcgtc
     1681 gtagtccgct tgcagcggcg ccggcggccg gaaccggctc ggatcgggca gcggaatttc
     1741 cttttcgatg gcggcctcct gatcgctcac gtcgaagcag agatagaccg gcccgccggg
     1801 atcgctcatg gcgatgcgat agccgcgcat gatcgaggag ggaaacgcct cgacgcccac
     1861 cggttgatcg tcccacttga cgaagtcgcg caccaggttg ccctgcacct gcgcggtgtg
     1921 aatccaatcg atccagggac gccgcttgct cgaattcatc ggccccgttc cgcccatgac
     1981 catcaccggc gtatgatcgc accaggcgtt gtagatcgcc atggaagcat gctgcagacc
     2041 gaccacgttg tggacaatcg ccggcatgat tttgccggtg gccttggcgt agccatgcgc
     2101 cacggctacg gcgatctcct cgtggcagca gaggaccatc tcgggattag gcgtgcggcc
     2161 gctttcgtaa ttgaccaggg agtcgtggat gccgcgaaag ctcgaaccgg ggttaagcgc
     2221 gacatattcg atgccaagaa ctttgagcag atcgacgacc aggtcggaac cgtaacgtgc
     2281 gggcataaaa cctccaggta ccggtatttt atctaatcaa cgccaaaaaa atggcgcgct
     2341 agcagacttg gattcgtccg ttagcgcgcc attcaagtca ccgcgatcgt gccgctttaa
     2401 tgcacggcag gatgcggaat gtcgatgccg taaagctctt tcacgttggt gtagaccaac
     2461 ttcttgcgga tatccgccgg caagtggcct aaatcgcggt cgatatattt cttcgattcc
     2521 ggccaagtcg agttgccatg cgggtaatcg ttcgaccaca tgcagttgtc ctggccccac
     2581 cattcgaaat tatgaccggc caccgtgtcg cggaagaagg tgccgtagat ttgcgtcttg
     2641 aaatattcgc tgggattttt cgtgaacggc ggcggattca ccttcttgaa gcggttataa
     2701 tagtaatccc actgttgcat catgaaaggc atccagccga tctcgttctc gacactgacg
     2761 aatttgagtc cgggatagcg gtcgagcacg ccgtagaaaa tcagctcgaa aaagtcgtcg
     2821 atgatttcct tgagcttgag gttcacgctg ccacgataag cctcgacgcc ggtgcgtttg
     2881 ttcccgaaga ccgtctgctt gtggtagcca tgaccggtga ggatatgcag atgcaccggc
     2941 atcttgagat cctgtgatgc ggcccagaat ttattgtagt gatcggagtg cattggcaaa
     3001 tccggatggg gagcctgcca gatcagcgaa ccgcgcatac ccgctttggc gcaccgttcc
     3061 aattctttca ccgccacatc gatgtcatac accgcgatcg ccgcgatgcc gatcagccgc
     3121 ttgggtgaac tgttgcagta gtcaatcaac caatcattgt aggcttggaa cgttacttcc
     3181 tgcagtttgg cgtcgtccat ggcgtactgg ggcagcagat aagtcggata gagcacttcg
     3241 gcggagagcc catcggtctc
//
LOCUS       DATIRS010001138         3376 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_576490, whole genome shotgun sequence.
ACCESSION   DATIRS010001138 DATIRS010000000
VERSION     DATIRS010001138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3376
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_576490"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2147)
                     /gene="gyrA"
                     /locus_tag="VLM90_14565"
     CDS             complement(<1..2147)
                     /gene="gyrA"
                     /locus_tag="VLM90_14565"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006259 - DNA metabolic process [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HSQ14249.1"
                     /translation="MEATIKPQKVPVYIEEEMRESFMAYAMSVIISRALPDVRDGLKP
                     VHRRVLYAMYDASNTSDKPYKKSARLVGDIMGKYHPHGDTAIYDTVVRMAQDFNLRYP
                     LVDGQGNFGSIDGDNPAAMRYTEIRMTLLAEEMLADIEKDTVEFVPNYDDSLKEPSVL
                     PSRIPNLLINGSAGIAVGMATNIPPHNLSEVIDALVALVDNPEMTIKQLMRHIPGPDF
                     PTGGFIHGREPIIRAYHEGKGIIQMRGKAFTETVKRTGKEQIIIGEIPYQVNKKRLIE
                     QIAELVNEKKIEGIGDLRDESDRDGMRIVIELKRDAVAEIVINQLHKHTQLQDSFGMN
                     MLAIVDGKPKLLTLKEALKCFLDHRKEVVTRRTAYDLRKAEERLHILEGFRIALDNLD
                     AVIALIRNSADGKEAKEGLMSNFALSELQAQAILDLRLQRLTGLERDKIMDEHRETVA
                     LIAKLRAILADEKEIYKIIVGELKEIKKQYGDERRTQIVDHSDDISIEDMIVDEDMAV
                     TISHEGYIKRNPVTLYRAQRRGGKGKIGTTTKEEDFVESLFIASMHSYILFFTTVGKV
                     YWIKVHELPQASRAARGKPIVNLLNLEPGEKVSAFLSVREFQEGRFIIFATKNGLIKK
                     TELMAYAHPRPSGIRAIGLEERDEVIGVRLTDGLQELILSTAEGQSIRFKEEQVRSTG
                     RGTFGVVGMRLDEGDHIVSMEILTRGFAVLTVS"
     gene            complement(2225..>3376)
                     /locus_tag="VLM90_14570"
     CDS             complement(2225..>3376)
                     /locus_tag="VLM90_14570"
                     /inference="COORDINATES: protein motif:HMM:NF036694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HSQ14250.1"
                     /translation="DSAGGSAKQGRDRRNQAILPLKGKILNVEKARFDKMLSSQEIRL
                     MITALGTGVKEDYDQAKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPELVEKGYLF
                     IAQPPLYKIKKGKQERYLKDEAMLEDHLIDLGTEGVRVRAGQNGNGNGNGLVGQPLQA
                     FVKKVARWEKLLISIGRKRKNRTVVEALMLAEGFGEEMLKDRQALQSLESRLATYVGL
                     AAPEQAPLSCALEEDPEHDCFKLVVTTRANGTGYQTVIDREFLTSAEYREIKKLFGEL
                     SAVGVPPYAIEDGDAKAQLKSFGAILSYIMEGGKRGQYIQRYKGLGEMNPEQLWETTM
                     NPETRVLLQVRVEDAVEADLIFSTLMGDEVEPRRKFIEDNALSVRNLDI"
BASE COUNT          657 a          979 c          949 g          791 t
ORIGIN      
        1 tcggaaaccg tcaagaccgc gaagccacgg gtgagaatct ccatgctgac aatatgatcg
       61 ccttcgtcca gacgcatgcc gacgacgccg aaggtaccgc ggccggtgga acgcacttgc
      121 tcttccttga aacgaatcga ctgaccctcg gcggtggaaa gaatcagctc ctgcaggccg
      181 tcggtcaggc gcacgccgat gacctcgtca cgctcttcga gtccgatggc gcgaatgccg
      241 ctgggccggg gatgggcgta ggccatcagc tcggtctttt tgatcaaacc gttcttggtg
      301 gcgaaaatga tgaagcgccc ttcttgaaac tcgcgcaccg agagaaacgc tgagactttt
      361 tcgcccggtt cgagattgag caggttaacg atcggcttgc cgcgcgccgc ccggctcgcc
      421 tgcggcagct cgtggacctt gatccaataa accttgccga cagtggtgaa aaacaggata
      481 taggaatgca tcgacgcgat gaacaacgac tcgacaaagt cctcttcctt ggtggtcgtg
      541 ccgatcttcc ccttgccgcc gcgccgctgc gcccggtaga gagtcaccgg gttgcgcttg
      601 atatagccct catgagagat cgtcaccgcc atgtcttcgt cgacgatcat gtcctcgatg
      661 gaaatatcat cggagtgatc gacgatctgg gtgcggcgct cgtcgccata ttgcttcttg
      721 atctctttga gctcgccgac gatgattttg tagatctctt tctcgtcggc gaggatcgcc
      781 cgcagcttgg cgatcagcgc gacggtctcg cggtgctcgt ccatgatctt gtcgcgttcc
      841 aagccggtca agcgctgcaa gcgcaggtcg aggatcgcct gggcctgcaa ttcgctcaac
      901 gcgaaattgc tcatcaaccc ttctttggct tctttaccgt cggcggaatt gcgaatcagc
      961 gcgatcactg cgtcgaggtt gtcgagcgcg atgcgaaacc cttccaagat atgcagccgc
     1021 tcttcggcct tgcgcagatc gtaggcggtg cgccgggtca ctacttcctt gcggtgatcg
     1081 aggaagcatt tcagcgcctc cttgagagta agcagcttgg gcttgccatc gacgatggcg
     1141 agcatgttca tgccgaaaga atcttgcagt tgggtatgct tgtgcagctg gttgatgacg
     1201 atttcggcca ccgcgtcgcg cttgagctcg atgacgatgc gcatgccgtc gcggtccgat
     1261 tcgtcgcgca gatcgccgat gccttcgatc tttttctcgt tgaccagttc ggcgatctgt
     1321 tcgatcaacc gtttcttgtt tacctggtag ggaatttccc cgatgatgat ctgttctttg
     1381 ccggtgcgct tgaccgtttc ggtaaacgcc ttgccgcgca tttgaatgat gcctttgccc
     1441 tcgtggtagg cgcgaatgat cggctcgcgg ccatgaataa atccgccggt gggaaaatcc
     1501 ggtccgggga tatggcgcat caactgcttg atcgtcatct cggggttatc caccagcgcc
     1561 accaaggcat cgatcacttc gctcagatta tgcggtggaa tattagtcgc catgccaacc
     1621 gcgatgccgg ctgagccatt gatcagcaga ttgggaatcc gcgacggcag caccgacggt
     1681 tctttgagcg aatcgtcgta gttggggacg aattcgacgg tgtctttctc gatgtcggcg
     1741 agcatctcct cggccaacag ggtcatgcga atctcggtgt aacgcatggc cgccggatta
     1801 tcgccgtcaa tggaaccaaa attaccctgg ccgtcgacca gcggatagcg caggttgaag
     1861 tcttgggcca tgcgcaccac ggtgtcgtag atcgccgtgt cgccatgggg atggtactta
     1921 cccatgatat cgccgaccag acgggcggat ttcttgtagg gcttatccga agtgttgctg
     1981 gcgtcgtaca tggcgtagag cacgcgccga tgcaccggct tcaaaccgtc gcgcacatcc
     2041 ggcagagccc ggctgatgat gacgctcatg gcataggcca tgaacgactc gcgcatctct
     2101 tcttcgatgt agaccggaac cttttgcggt ttgatagtag cttccatgaa tcgctcgcca
     2161 atctgctagg tgaattattt ctcggtgcgg cgctgggcaa ggtgccagca ccgccaacgg
     2221 cgcactaaat gtctaagttt cgcaccgaca gggcattgtc ctcgatgaac ttacgccgcg
     2281 gctcgacttc atcgcccatc aacgtcgaaa aaatcagatc ggcctccacc gcatcctcga
     2341 cgcgcacctg caagagcacg cgagtctcgg gattcatggt ggtttcccag agctgttcgg
     2401 ggttcatctc gcccaatccc ttgtagcgct ggatatactg cccgcgcttg ccgccttcca
     2461 tgatgtagga aagaattgcg ccgaaggatt tcagctgcgc cttggcgtcg ccgtcttcga
     2521 tggcgtaggg cggcacgccg acggcggata gctcgccgaa cagtttttta atttctctgt
     2581 attccgcgct ggtcaaaaac tcgcgatcga tgacggtttg atagccggtg ccgttggcac
     2641 gggtcgtgac gaccagcttg aagcaatcat gctccgggtc ctcctcaagg gcgcatgata
     2701 acggcgcctg ctcaggcgcg gccaacccga cataagtcgc caaacggctc tccagactct
     2761 gcagcgcctg acgatccttt aacatctcct cgccgaaacc ctctgccaac attaacgctt
     2821 ctaccaccgt gcggtttttc cgcttgcgac cgatggagat taacaacttt tcccagcgcg
     2881 cgaccttctt gacgaacgcc tgcaatggct ggccgaccaa accgttgccg ttaccattgc
     2941 cattttgccc ggcgcgcacc cggacgccct cagtgccgag gtcgatgaga tgatcttcga
     3001 gcatcgcctc atccttaaga tagcgctcct gtttgccttt ttttatttta tagagcggcg
     3061 gttgagcgat gaagagataa cccttttcca ccagctcggg catttgccga tagaagaatg
     3121 ttaaaagcag cgtgcgaata tgcgagccgt caacatcggc gtcggtcatg atgatgatcg
     3181 aatggtagcg cagcttggct tgatcgtagt cttctttgac gccggtgccc aaggcggtga
     3241 tcatcaggcg gatctcttgg gacgacagca tcttatcgaa gcgcgccttt tcgacgttta
     3301 gaatcttacc cttcaacggc aagatcgctt gattgcgccg gtcgcgcccc tgcttggctg
     3361 aaccgccggc ggaatc
//
LOCUS       DATIRS010001139         1685 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1069433, whole genome shotgun sequence.
ACCESSION   DATIRS010001139 DATIRS010000000
VERSION     DATIRS010001139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1685
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1069433"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..223
                     /locus_tag="VLM90_14575"
     CDS             <1..223
                     /locus_tag="VLM90_14575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14251.1"
                     /translation="VDAEVVEELRSQCHDIHSADHLAGNQTAQYVSLRLTVPERHSER
                     NAGKRTAETIVQGFEVQKFNRFRSGVGGG"
     gene            complement(321..1034)
                     /locus_tag="VLM90_14580"
     CDS             complement(321..1034)
                     /locus_tag="VLM90_14580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14252.1"
                     /translation="MSHTREYCDWETAIGERVRAAMASPEMERYFAVKMTPARARVAL
                     LQLSLFVSCRRDGWANLIANFDAPAMRQRLMAHEYDELVEDEYSSKGHYDLLIRQGAL
                     IGLTANDFAQVQPLRTSMATFYGWKWITRAGAWQDGLIAMMATEWVNDDRRLLDQGGG
                     LSRRDGLRWIRDFGYKWEEMANFAAHAVADEKHSDLFVPLLDKFISNRNSALKAADDA
                     LELFKLYHLGVAEEMERLD"
     gene            complement(1274..>1685)
                     /locus_tag="VLM90_14585"
     CDS             complement(1274..>1685)
                     /locus_tag="VLM90_14585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14253.1"
                     /translation="WRDVEASIGRDMEYFAAIGLKAPYESYPGQPFSEITPRSGADRR
                     DWIIGTPDDAIKQIERMQAETGGFGGLLLSTHEWTGTEKVRRSYELFARYVMPHFRGH
                     TSGYHDEWRRIQQANSNGGFKLEELGTVSNLAMK"
BASE COUNT          346 a          510 c          469 g          360 t
ORIGIN      
        1 cgtcgacgcc gaagtggtcg aggagctgcg atcgcaatgc cacgatatcc attccgcgga
       61 ccacttggcc ggaaaccaga cagcgcagta tgtctcgctg cgtcttacgg ttccagaacg
      121 gcacagcgag cggaacgcgg ggaaaagaac ggcggagacg atcgttcaag ggttcgaggt
      181 tcaaaagttc aatcgttttc gaagtggggt gggtggtggg taagttttgg catggacatt
      241 cttaagcggg cgggttttaa actcgcccct gcgtctcgaa aaattttttg cgcctttgcg
      301 ttctttgcgg ctaatcggtt ttaatccagt ctctccatct cctcggcgac gcccaagtga
      361 tacaacttga atagctccag cgcatcgtca gcggccttga gcgcgctgtt gcgattggag
      421 atgaatttgt cgagcagcgg cacgaataga tcgctgtgtt tttcatcggc cacggcatga
      481 gccgcgaagt tagccatttc ttcccattta taaccaaagt cgcggatcca gcgcaggccg
      541 tcgcgccgcg ataggccgcc gccttgatcg agcaagcggc ggtcatcgtt cacccactcg
      601 gtcgccatca tggcgatcaa gccgtcttgc caggctcccg cccgcgtgat ccacttccaa
      661 ccgtaaaacg tcgccatgct ggtgcgtagc ggctgtacct gagcaaagtc attcgcggtg
      721 agaccaatca gcgccccctg acgaatcagc aaatcgtaat ggcctttgga actgtattcg
      781 tcttccacca actcatcata ttcatgggcc atcagccgct ggcgcatggc tggtgcgtcg
      841 aagttggcga tcagattggc ccaaccgtcg cgccggcaac tgacgaacag actcaattgc
      901 aacagcgcca cccgcgcccg cgccggcgtc atcttgacgg cgaagtagcg ttccatctcc
      961 ggcgacgcca tcgcggcgcg cacccgctcg ccgatcgccg tctcccaatc gcaatattct
     1021 ctcgtatgac tcataggtac tctcggaatc cgattttcca cccgccacag cggaagaccg
     1081 caaagttcgg aaaatgagtg tgaaaactgt tcgtcggaat ttcaatattt ccagcccgaa
     1141 cttggcgtct tggcgccttt gcgggagata ttccgagacc gaccggtgcg ccaggcacac
     1201 ccgacgaaaa ccttcgtgtc cttcgcgcct tcgtggtgaa aacaaactac acaataaccc
     1261 cgaaagagcg gcctcacttc atcgccagat tgctgaccgt cccgagctct tcgagcttga
     1321 aaccgccatt ggaattggcc tgctgaatgc gccgccattc gtcgtggtag ccagaagtgt
     1381 ggccgcggaa gtgcggcatg acgtagcgcg caaacagttc gtaagaccgg cgcaccttct
     1441 ccgtcccggt ccattcatgg gtgcttaaca acaaaccgcc gaagccgccg gtctctgcct
     1501 gcatgcgctc gatctgcttg atggcgtcat ccggcgtgcc gatgatccaa tcgcgccggt
     1561 cggcgccgga gcgtggggtg atttcgctga acggttgacc cggataggac tcgtagggcg
     1621 ctttcaagcc gatggcggcg aagtattcca tgtcgcggcc gatgctcgcc tcgacatcgc
     1681 gccac
//
LOCUS       DATIRS010001140         1660 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1659213, whole genome shotgun sequence.
ACCESSION   DATIRS010001140 DATIRS010000000
VERSION     DATIRS010001140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1660
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1659213"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            156..1166
                     /locus_tag="VLM90_14590"
     CDS             156..1166
                     /locus_tag="VLM90_14590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14254.1"
                     /translation="MAKKIREFMTHREPSEHIWMERDESAVIGTARMGQRMVPHIRPF
                     DLLRSTPLNGNRARATVFEGDALRVSTEHIAGRETQLTRAADYDIVYLQFCGRSKIES
                     EGGVIEVEPGEIALVPSAISHRSTGSDQCLRVRVASQEAMTEGVDPEKPLTQNKFSVK
                     PSEPIGPANGHNADGASDGTALEHISFWDPQSDLWVERDVAGLIGCKREGGRPVRKLS
                     AFNYFTGMTGKGGARAPILYNGNEFRVDVYNLEEEQNGFHRGCDEDEIWFQFRGHSLN
                     HTEWGAMELDAGQMSYIPRGVAHRITGGPGFLRMVLYSRKLVHPKAFNNVSERATRFD
                     VR"
     gene            1322..>1660
                     /locus_tag="VLM90_14595"
     CDS             1322..>1660
                     /locus_tag="VLM90_14595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14255.1"
                     /translation="MIGSHGYLHAQQTWQAEWDKTVATAKKEGKVVVGLPPSAELRRE
                     LEPAFKARFGFEMEIFSATGPQIANRVVTEGKAGMRYFDAFIFGSCTGVPLIKSGLFD
                     PAENYFIPPEV"
BASE COUNT          380 a          437 c          519 g          324 t
ORIGIN      
        1 aaaactcacc gacctgagca aagtatttga ctacgcgatt atcaggcgcg tctacggcga
       61 gttaaaaaga tcatggcagc ctaagttcta agcgctgatt gcgctagaga tcgatagtat
      121 cgattaagga ttagcttccg acgaaggaga aagttatggc gaagaaaatt cgtgaattca
      181 tgacccaccg agaaccatcg gagcatatct ggatggagcg cgacgaaagc gcggtgatcg
      241 gcacggcgcg catggggcaa aggatggtgc cgcatatccg gccgttcgat ttactgcgca
      301 gcacaccgct taacggcaac cgcgcgcggg cgacggtctt cgagggcgat gccttgcggg
      361 tgagcaccga gcatatcgcc ggccgcgaga cccagctgac acgcgcagcg gattacgata
      421 tcgtttattt gcagttttgc ggccgctcga agatcgagag cgaaggcggt gtcatcgaag
      481 tcgagcccgg cgagatcgcg ctggtgccgt cggcgatttc gcatcgcagc accggctcgg
      541 accaatgctt gcgcgtgcgc gtggcgagcc aggaagcgat gactgaaggc gtcgatccgg
      601 agaagccgct gacgcaaaat aagttcagcg tcaaaccgtc ggagccgatc ggcccggcca
      661 atggccacaa tgccgacggc gctagcgatg gaacggcgct ggagcatatc agtttctggg
      721 acccgcagtc ggatctctgg gtcgagcgcg atgtcgcagg gttgatcggc tgcaaacgcg
      781 aaggcggccg gccggtgcgc aagctgagcg cgttcaatta tttcaccggc atgaccggca
      841 agggcggcgc gcgcgcgcca attctataca acggcaatga gtttcgcgtc gacgtttaca
      901 atctagagga agagcagaac ggctttcatc gcggctgcga cgaggatgaa atctggtttc
      961 aattccgcgg ccattcgctg aatcacaccg aatggggcgc catggagctc gacgccgggc
     1021 aaatgtccta catcccgcgc ggcgtggcgc accgcatcac cggcggcccg ggattcctgc
     1081 gcatggttct ctacagccgc aagctggtcc atcccaaggc gttcaataac gtctcggagc
     1141 gcgctacgcg cttcgatgtt cggtagagat tgatcggcga ggaatctttt ttcaccacag
     1201 agggcagaga ggtcacagag tgaaagaatc ggaatcggaa tttttaccac aaagagcaca
     1261 aaaggcacaa agtaaaatga tgcggagaac tgtcgcaccg gttctattgt gtttaatcgt
     1321 agtgataggt agtcacggct atctacatgc gcagcaaact tggcaggccg aatgggataa
     1381 gactgtcgcg acggcgaaga aggaaggcaa ggtcgttgtc ggcttgccgc caagcgcgga
     1441 gttgcgccgg gaacttgagc cggcgtttaa ggcgcgcttc ggtttcgaga tggagatttt
     1501 ttccgccact gggccgcaga tcgccaatcg cgtggtgacc gaaggcaaag ccggcatgcg
     1561 ttacttcgat gcgtttattt tcggctcgtg caccggtgtg ccgctgatca agagcggctt
     1621 gttcgatccc gcggaaaatt acttcattcc tccagaggtc
//
LOCUS       DATIRS010001141         1522 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_675562, whole genome shotgun sequence.
ACCESSION   DATIRS010001141 DATIRS010000000
VERSION     DATIRS010001141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_675562"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..739
                     /locus_tag="VLM90_14600"
     CDS             <1..739
                     /locus_tag="VLM90_14600"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSQ14256.1"
                     /translation="NPLRLIVTLLSPEMHLRFEESFKVIGVPSYSLTEDILSVIGPRN
                     MPKEKLGSCGVVLAPEVHRVAIHDEDGNALPTGKAGEIVKQSPTVMQGYYKNAEATAK
                     ALKDGWLDTGDLGYVDADGYLYFVDRVKDMVRRGDENISSEEVELVLNSHPQVAESAV
                     IAVPDQIRGEEVKAYIVLKSGATPGSVPPQDIWNFCKPHLAAFKVPRFIEYRGELPKT
                     PSSKVQKNILRDESKQGGGRVFDRLAK"
     gene            970..>1522
                     /locus_tag="VLM90_14605"
     CDS             970..>1522
                     /locus_tag="VLM90_14605"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HSQ14257.1"
                     /translation="MTKESFKTLVFGKAKDPLDPRVFHQISLVAFLAWVGLGADGLSS
                     SAYGPEEAYLALGQHYYLALLLVIMMTATVFIISASYAQIIELFPTGGGGYLVATKLL
                     GSRAGLVSGSALVVDYMLTITISIASSTDALFSFLPVALAPYKFAVAVLLIFGLIFLN
                     LRGVRESVLFLLPIFLLFIVMHIV"
BASE COUNT          302 a          412 c          450 g          358 t
ORIGIN      
        1 caatccgctg cgtctgatcg tgactttgct gtcgccggag atgcacttgc gcttcgaaga
       61 aagtttcaaa gtcattggtg tgccatcata cagtttaacc gaagatatcc tgagcgtgat
      121 cggcccgcgc aacatgccaa aggaaaaact cggcagttgc ggtgtcgtgc tggcgccgga
      181 agttcaccgc gtggcgattc acgacgagga cggcaatgcg ctgccaacgg gcaaggcagg
      241 ggagatcgtc aagcagagtc cgacggtcat gcagggttac tataagaatg ccgaagccac
      301 ggcgaaggct ttgaaggacg gttggctcga caccggtgac ctcggctatg tcgacgccga
      361 tggctacctt tacttcgtcg atcgggtgaa ggacatggtg cggcgcggcg atgagaatat
      421 ttcgtcggaa gaagtggaac tcgtgctcaa ctcacacccg caggtcgccg agtcggcggt
      481 gatcgccgtg ccggaccaga ttcgcggcga agaagtgaag gcctacattg tcttaaaatc
      541 aggagcgacg cctggcagcg tgccgccgca ggatatttgg aacttctgta aaccgcattt
      601 ggccgccttc aaagtcccgc gctttatcga ataccgcggc gagctgccca agacgccgag
      661 ctcgaaggtg cagaaaaaca ttctgcgcga cgagagcaag cagggcggcg gacgggtatt
      721 cgatcgcctc gccaagtagc ttggccgaat ctcgacgatc ttccctctct acggcgctca
      781 tgccgctttg gcgccgctaa gtcaccaatt atccagtgtt tacttcttaa caatctttta
      841 atcttttctc ccgccgattt aattatcagt cgaggtgcgg ccgggttaat ttgacaccgt
      901 gaaaaggcat cgcggtcggc gcccatgtgc tgctctgccg atggccaaca agtagatcgc
      961 ggtgaaaaga tgaccaagga atcgttcaag acgctggttt tcggaaaagc caaggatccg
     1021 ctcgatccgc gggtgttcca tcaaatatcg ctggtggcat ttctcgcctg ggtcgggctg
     1081 ggcgccgacg gcctgagctc ctcggcctat ggtcccgagg aagcttatct ggcgctgggg
     1141 cagcattatt atctggcttt gttgcttgtg ataatgatga ccgccacggt cttcatcatt
     1201 tccgccagct atgcgcagat catcgagctg tttccgaccg gcggcggcgg ttatctggtc
     1261 gccaccaagt tgctcggctc gcgggccggt ttggtatcgg gttcggcgct ggtggtcgac
     1321 tacatgttga cgatcacgat atcgatcgcc agcagcaccg acgcattgtt cagttttctt
     1381 ccggtggcgc tggcccctta caagttcgcc gttgcggtgc tgctgatctt cgggctgatt
     1441 tttctcaatc tgcgcggcgt cagggaatcg gtgctgtttt tgctgccgat atttctgctg
     1501 ttcatcgtca tgcacatcgt cg
//
LOCUS       DATIRS010001142         1755 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_380798, whole genome shotgun sequence.
ACCESSION   DATIRS010001142 DATIRS010000000
VERSION     DATIRS010001142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1755)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1755)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1755
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_380798"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..320)
                     /locus_tag="VLM90_14610"
     CDS             complement(<1..320)
                     /locus_tag="VLM90_14610"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HSQ14258.1"
                     /translation="MADKVAIVTGGARHIGAAYCRRLAEEGAAVVIADILDGETVASE
                     IRSKGGTALALKIDVSNEEDTQRMASQAVKAFGRIDILVNNAAIFINIQRHPFYEITG
                     EEWD"
     gene            complement(424..>1755)
                     /locus_tag="VLM90_14615"
     CDS             complement(424..>1755)
                     /locus_tag="VLM90_14615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HSQ14259.1"
                     /translation="LDKTYLGWFADVKRTVETIERFSKKDAASFMDIWTRWQPVVQKI
                     VFTETYAVPVPMEEKRPLLEKTLEGREYLKYFDTTPEEFVLRHFEHPRVRAFIGFLGV
                     MRGYELDAPKTGYLIPAMIAWGVNPQLCRGTSHALGDNLAHMMSHNGVDYIEANGVER
                     ILVDKGQATAVVLEDGTVIKARKFIASNVNPVETFIKLVGRENLESKFATLADNFRFS
                     KTTPIFATNLALNERPKYITEEKHPEVAGSFMHIVGLEEYEDLQNLFEDCRTGQLPRK
                     PFMNGATPSYHDPTQAPPGKATAFMWQLMTYNLWGNPQNWDKARDDWFNKQLAVWQKF
                     APNLTDANILSTDSTTPLDIERHDKNMYCGDWMVGEYSGDQALENRPFPGWGQYKTPI
                     DGLFMCGSSCHPGGNITGAPGYNAARVIAESLGLKTWWNPVDFREHLKGLR"
BASE COUNT          338 a          503 c          495 g          419 t
ORIGIN      
        1 ttgtcccact cctcgccggt aatttcgtag aaaggatggc gctggatgtt gatgaagatc
       61 gccgcgttgt tgaccaggat gtcgatacgg ccaaatgcct taacggcttg gcttgccatg
      121 cgctgggtat cttcttcatt cgacacgtca attttgagcg ccaacgccgt gccgcccttc
      181 gaacgaatct cactcgctac cgtttcgccg tcaagaatat cggcgatgac gaccgcagcg
      241 ccttcttccg ccaagcgccg gcagtatgcc gcgccgatat ggcgggcgcc gccggtaacg
      301 atggcgactt tgtccgccaa cctcaccgca gcacctcgca ttggtgaagt acctgacttc
      361 ggaaggtatc gtttctgaca ttgaaacttg aacgtatgaa cccttgaacg gggcttagac
      421 ttttcatctc agccctttca gatgttcgcg gaagtcgacc ggattccacc aggttttcaa
      481 tcccaagctt tcggcaatta ctcttgccgc gttgtagccc ggcgcgccgg tgatgttgcc
      541 gccgggatgg caggacgatc cgcacatgaa cagaccgtca atcggcgtct tgtactggcc
      601 ccagcctggg aacggccgat tctctaatgc ttgatcgccg ctatactcgc cgaccatcca
      661 gtcgccgcag tacatgtttt tgtcatggcg ctcgatgtcg agcggcgtag tcgaatcggt
      721 cgagagaatg ttggcgtcag ttagattcgg cgcaaacttt tgccaaacgg cgagctgttt
      781 gttgaaccaa tcatcgcgcg ctttgtccca gttttgcggg ttgccccaga gattgtaggt
      841 catgagttgc cacatgaacg ccgtcgcttt tcctggtggc gcttgggttg ggtcgtgata
      901 ggacggcgtc gcgccgttca tgaacggttt gcgcggcagc tggccggtgc ggcagtcttc
      961 gaacagattc tgcaagtctt cgtactcttc caagccgacg atatgcatga acgaaccggc
     1021 gacctcggga tgtttttctt cggtgatgta tttgggccgt tcgttgaggg ctaaattggt
     1081 cgcgaagatc ggcgtggtct tggaaaagcg aaagttatcg gccagggtcg cgaacttgct
     1141 ttcaagattc tcccgcccga ccagcttgat gaaagtctcg accggattga cgttagacgc
     1201 gatgaacttg cgcgccttga tcaccgtgcc gtcttccaat acgactgcgg tggcctggcc
     1261 cttgtcgact agaatgcgct cgacgccgtt tgcttcgata tagtcgacgc cattgtgcga
     1321 catcatatgc gccagattgt cgcccagcgc atgcgaggtg ccgcggcaca gctgcgggtt
     1381 gacaccccag gcgatcatcg ccgggatcag ataaccggtc ttgggcgcgt cgagctcgta
     1441 accgcgcatg acgccgagaa agccgataaa cgcgcgcacc ctcggatgct cgaagtggcg
     1501 caggacgaac tcttcgggcg tggtgtcgaa gtatttcaga tactcgcgcc cttcgagagt
     1561 tttttccaag agcggccgtt tctcctccat cggcacgggc acggcatagg tttccgtaaa
     1621 gacgatcttc tgcaccaccg gctgccagcg cgtccagata tccatgaacg acgccgcatc
     1681 cttcttggaa aaccgttcga tggtttccac cgtacgcttc acgtcggcga accaacccag
     1741 atacgttttg tcgag
//
LOCUS       DATIRS010001143         2147 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_182931, whole genome shotgun sequence.
ACCESSION   DATIRS010001143 DATIRS010000000
VERSION     DATIRS010001143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2147)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2147)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2147
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182931"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..681
                     /locus_tag="VLM90_14620"
     CDS             <1..681
                     /locus_tag="VLM90_14620"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ14260.1"
                     /translation="LCIKQALSSQAPFSFNGEFHQYQNVTLGVKPLQQPHPPIWIHSR
                     DADTLALLAREGVHTGYLFLVPRDEVAPRYHEYLRLWRDAGHTGKPNIGYWILVYVDE
                     TDAKAVAKAKPYFEHCFTHVFGTRADGGIGYQRLAENHEKRGNPRGAEIARHSIDVEY
                     LREKNLAFVGSPKTVIAQIKQAASEGVFNTVMAEFNIGAIAEEDLMRSIKLFGSEVLP
                     ALRGFEPY"
     gene            complement(690..833)
                     /locus_tag="VLM90_14625"
     CDS             complement(690..833)
                     /locus_tag="VLM90_14625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14261.1"
                     /translation="MRAESVQAILDFLPKEQVKDITPEKYIDNSLIRELETSGFVKNL
                     YRK"
     gene            complement(891..1664)
                     /locus_tag="VLM90_14630"
     CDS             complement(891..1664)
                     /locus_tag="VLM90_14630"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14262.1"
                     /translation="MPTFVRLCVLLLLMVWAGEMPAQTAGARKAPVRIIYSALTASNG
                     PVWVAADQGLFEKYGLDVQIVHGRGASPIQALAGGTVELGHFAGASVISANLGGGDLV
                     FVAAQTNYVVLSIWTRKDSPIKTLTDLAGRSIGVSAPGSATHTTTRAALRKAGIADKD
                     MKFVHHGALPEIFVSLDKGLVDAGVASAPRPAFRELVDLATQRIPFLQGAIIVNRSYL
                     HRERPVLLNFLRGFVEAMKLVREKPEVVAASLMNHLRIP"
     gene            complement(1664..2053)
                     /locus_tag="VLM90_14635"
     CDS             complement(1664..2053)
                     /locus_tag="VLM90_14635"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSQ14263.1"
                     /translation="MAFKVADVEKSIRWYGDAFGAKVIYRVEPSGDRPELMFLEFSKG
                     QCVELFPGGKNMLASPPDPIGYIHFCLVLDNLEQALEHLAKMGVKPDRKFIGRAKQRI
                     AFVADPDGNSIELMEIPPDSEIYRTYP"
BASE COUNT          484 a          669 c          558 g          436 t
ORIGIN      
        1 ctgtgcatca aacaagcgct atcgagccag gcgccgttca gcttcaacgg ggaatttcac
       61 cagtatcaga acgtcacgct cggggttaag ccgctccaac agccccatcc gccgatttgg
      121 attcattcgc gggacgccga cactctggcg ctccttgccc gcgaaggcgt tcatacggga
      181 tatcttttct tggtgccgcg cgatgaggtt gcgccgcgct atcacgaata tttgcgctta
      241 tggcgtgacg cgggccacac cggcaagccc aacatcggct actggatttt agtatacgtc
      301 gatgagaccg acgccaaagc cgtggcgaaa gctaaaccct atttcgagca ctgtttcacc
      361 catgtatttg gcacccgcgc ggacggtggc atcggctacc agcggcttgc cgagaaccac
      421 gagaaacgcg gcaatccccg cggcgccgag atcgcgcgcc actcgatcga cgtcgaatat
      481 ttgcgagaaa agaatctcgc ctttgtcggc tcgcccaaaa ctgtcatcgc acagatcaag
      541 caagcggcca gcgagggcgt attcaacacc gtcatggccg agttcaacat cggcgccatc
      601 gcggaagaag atttaatgcg ctcgatcaaa ctcttcggca gcgaagtcct gccggctttg
      661 cgcggcttcg aaccctattg agcgaagatt tatttgcggt agagattctt gacgaaacca
      721 gacgtttcca actcccgaat caaactgttg tcaatatatt tttccggcgt gatgtctttc
      781 acctgctcct tcggcagaaa atccagaatc gcctgcaccg actcggcgcg cacatagggt
      841 acttcctccc aaacattggc gaatgagcga tacgctccac gggcaatctc ctatgggatg
      901 cgcagatgat tcatcagcga tgcggccacc acctccggct tttcccgcac cagtttcatc
      961 gcttcaacga agccccttaa gaaattcagc agcaccggcc gttcacggtg aagataactc
     1021 cggttgacga tgatcgctcc ttggagaaac ggaatcctct gcgtcgccaa atcgacaagc
     1081 tcacgaaaag cgggacgggg cgctgaggca acgccggcgt cgaccaaccc cttgtctaat
     1141 gaaacgaaaa tctccggcag cgcgccgtga tggacgaatt tcatatcctt gtccgctatc
     1201 ccggccttgc gcagcgccgc tcgcgtcgtc gtgtgtgttg ccgagcccgg cgcgctcacg
     1261 ccgatgcttc tcccggccaa gtccgtgagc gttttaatcg gcgaatcctt gcgcgtccaa
     1321 atcgacagca cgacgtaatt ggtctgcgcc gcgacaaaaa ccagatcgcc gccgccgaga
     1381 ttggccgaga tcactgacgc gccggcaaag tggcccaact cgacggtgcc gccggccagc
     1441 gcttgaatcg gcgaagcgcc gcggccgtga acgatctgga catcgagacc gtatttctcg
     1501 aaaagtccct gatcggcagc aacccatact ggcccgtttg acgccgtgag cgcgctgtag
     1561 atgattcgca ccggcgcctt gcgcgcgccc gcggtctgcg ccggcatttc accagcccaa
     1621 accatcagca ggagcaagac acagagtcgc acaaacgttg gcatcacgga taggttcggt
     1681 agatctccga gtccggtgga atctccatca gctcgatact gttaccgtcg ggatcggcga
     1741 caaacgcgat gcgctgcttg gcgcggccga tgaatttgcg atcgggcttc acgcccatct
     1801 tggccagatg ctccagtgcc tgctccagat tatcgagcac cagacagaaa tgaatgtagc
     1861 cgatcggatc cggcggcgac gccaacatgt ttttgccgcc gggaaaaagc tcgacacact
     1921 gccctttgga aaactccaag aacatcagct ccggccgatc gccgctcggc tcgacacgat
     1981 agatcacctt ggcgccgaac gcatcgccgt accagcgaat gctcttttcc acatccgcaa
     2041 ctttaaaggc cacatggcca aaacgaactc catcaattgg cattatatta atccctttcc
     2101 gcgtcagtta attaacaact caagatctac tgaactgctt tgcttcg
//
LOCUS       DATIRS010001144         1548 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1266585, whole genome shotgun sequence.
ACCESSION   DATIRS010001144 DATIRS010000000
VERSION     DATIRS010001144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1548
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1266585"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..260
                     /locus_tag="VLM90_14640"
     CDS             <1..260
                     /locus_tag="VLM90_14640"
                     /inference="COORDINATES: protein motif:HMM:NF013067.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HSQ14264.1"
                     /translation="GSLAGALGGLDALVFTGGIGENAVSIRARICRDASWLGLEFDEE
                     ANTNGGPHISREGSRVSAWVIPTNEELMIARHTRRLVRREG"
     gene            392..>1548
                     /locus_tag="VLM90_14645"
     CDS             392..>1548
                     /locus_tag="VLM90_14645"
                     /inference="COORDINATES: protein motif:HMM:NF012670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14265.1"
                     /translation="MRDSNRSSAIDELCINTILTLAMDAVQQANSGHPGTPMALAPVV
                     YCLWQRFLRFDPNHPIWPNRDRFVLSVGHASMLLYAMLHLTGVRAVNPKYETLGHLSV
                     ELDDIKRFRQLESKCPGHPEYRWTSGVESTTGPLGQGVATSVGMAIAERWLASYFNRP
                     GFELFDYDVYALCGDGCMMEGISGEAASLAGHLKLANLCWIYDNNHITIEGNTALAYS
                     DDVATRFIGYGWNVTRVGDANDLEMLERAFKTFKHTTDRPSLIIVDSHIAYGAPNKQD
                     TSAAHGEPLGKEEIKLAKRNYGWPEDAQFLVPDDVLAHFRAGIGARGQVLHDAWWSKF
                     EAYKREYPELADHGYRMLRRELPESWESELPVFPPDSKGMATRDASGLALNA"
BASE COUNT          317 a          436 c          488 g          307 t
ORIGIN      
        1 tcggctcgct cgccggagct ctgggcggtc ttgacgcgtt ggtgttcacg ggtggaatcg
       61 gcgaaaacgc ggtttcgatc cgcgcgcgca tctgccggga cgcgagttgg cttggtcttg
      121 agttcgatga agaggccaac acaaatggcg gtccgcacat cagccgcgaa ggcagccgcg
      181 tgtcggcatg ggtgataccg accaatgaag aattgatgat cgcgcggcat acgcggcggc
      241 tggtgagaag ggagggatag tttctcacca cagagactca tggttcacgg agttgttttt
      301 taaagctttt tctctgcggc ctcagcgtct cggcggtaaa tgttcttgtc gagggatagc
      361 atcagaatga cggcagaaag tgtgaacggc tatgagggat tccaatcgta gtagcgccat
      421 agacgaattg tgcatcaaca ccatccttac cctcgcaatg gatgcggtgc agcaggcgaa
      481 ctccggccat ccgggaacgc ccatggcgct ggcgccggtg gtctattgtc tgtggcagcg
      541 gtttttgcgc ttcgacccga accatccgat ctggcccaac cgggatcgct tcgtgttgtc
      601 cgtcggacac gcatcgatgc tgctctatgc gatgctccac ctgaccgggg tcagagcggt
      661 caacccgaag tacgaaacac tcggccattt atccgttgag ctggacgaca tcaagcgctt
      721 tcgccagctc gaaagcaaat gccccggcca tccggaatac cgctggactt caggcgtcga
      781 gagcaccacc gggccgttgg ggcagggcgt ggcgacgagc gtcggcatgg ccattgccga
      841 gcgctggctg gcgagctact tcaaccggcc gggtttcgag ctgttcgatt atgatgttta
      901 cgctttgtgc ggcgacggct gcatgatgga aggaatctcc ggcgaagccg cgtcactggc
      961 gggtcatctc aagctcgcca atctctgctg gatctacgat aacaaccaca tcaccatcga
     1021 gggaaacacg gcgttggcgt acagcgatga cgtggcgacg cgcttcatcg gttacggctg
     1081 gaacgtcacg cgggtcggcg atgccaacga tctggagatg ctcgagcgcg cttttaagac
     1141 gttcaaacat accactgatc gacctagctt gatcattgtc gatagccaca tcgcatacgg
     1201 cgcgcccaac aaacaagata ccagtgcggc ccacggcgag ccgttgggca aggaagagat
     1261 caagctggcc aagcgcaatt acggctggcc ggaggatgcg cagttcctcg tgcccgacga
     1321 tgtcctcgcg catttccgag ccgggatcgg cgcgcgcggc caggtgctgc atgacgcctg
     1381 gtggagtaaa ttcgaagcgt acaagcgcga gtatccagag ctcgccgatc atggctatcg
     1441 catgctgcgc cgcgagctgc cggaaagctg ggaaagcgag ttgcccgtct ttccccccga
     1501 cagcaagggg atggcaaccc gggatgcgtc gggcctagcg ttgaatgc
//
LOCUS       DATIRS010001145         2087 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_676004, whole genome shotgun sequence.
ACCESSION   DATIRS010001145 DATIRS010000000
VERSION     DATIRS010001145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2087
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_676004"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1109)
                     /locus_tag="VLM90_14650"
     CDS             complement(<1..1109)
                     /locus_tag="VLM90_14650"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ14266.1"
                     /translation="MKADITPPAPSRMMQTCYPWVVIGVAFLTVAMAFGARNAFAVFL
                     IAVIEEFHWSRALASGALMLGSLVWTVVAPMIGNLLDRYGPRPVMTGGALVMAAGLIV
                     SGLADTVVEFYLGMGILVGAGFAALPMTSQATFLANWFVRKRGMAIGLAASGIGLGIL
                     IVVPLTQWLIANFGWRQAFFILAGLLICLVAPANFFLQRQRPEQMGLKPDFGAYEGPV
                     PTGHGHGGNAGAQGITLKQALRTTRFWSFAAGVLFGAIPLHMVLIHQVAAVNDAGYSK
                     EVAALALGLIGLFTAPSMILMGLLADHIGRPRCYALGSASLMLGIALLRIIGFSQQAW
                     LLYAFPPLIAFGFSSRQSLYPTIAADLFHGKSFGA"
     gene            complement(1203..>2087)
                     /locus_tag="VLM90_14655"
     CDS             complement(1203..>2087)
                     /locus_tag="VLM90_14655"
                     /inference="COORDINATES: protein motif:HMM:NF015426.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRCF domain-containing protein"
                     /protein_id="HSQ14267.1"
                     /translation="CSAIIESGLDFPNANTIIINRAYRFGLAQLYQLRGRVGRSHRHA
                     FAYLLIPGEHAITPDAERRLRALQELDGLGGGFKLALHDLEIRGAGNLLGDQQSGQIT
                     AVGFELYTEMMQAAIQELKGEEILPEIDPEIRLGISAYFPDSYMPDANQRLYFYKRLA
                     SLKNAGELDEMKAEIEDRFGPYSEVVDNLFLVMNLRRVLKEFLVQQISFSDGKIFLLF
                     HADSPVKVDKLLELIHKQKNRFRLAPDGRLSFMPKQSDWQPLAGEVIELLHAIREIPA
                     PQKAQWIPVGEKKIGVLE"
BASE COUNT          492 a          631 c          605 g          359 t
ORIGIN      
        1 atcgcgccaa aggacttgcc gtgaaataaa tccgccgcga tggtcggata gagggactgg
       61 cgcgacgaaa aaccaaaggc gatcaatggc gggaaagcgt aaagcagcca ggcctgctgt
      121 gagaaaccga tgatcctcaa taacgcgatg ccaagcatca gcgacgccga gccgagagcg
      181 taacagcgcg gacggccgat gtgatcggcg agcaacccca tgagaatcat actgggcgca
      241 gtgaacaaac cgatcaagcc tagggccaaa gcggcaacct ccttcgaata gccggcgtcg
      301 ttgaccgccg ccacctggtg aatcaacacc atatgcagcg gaatcgcgcc gaacagcacg
      361 ccggcggcaa aggaccaaaa gcgcgtcgtg cgcagcgcct gcttgagcgt gatcccctga
      421 gctccggcgt tgccgccatg gccatggccg gtgggcaccg gcccctcata ggcgccgaag
      481 tccggtttca gtcccatttg ttccggccgc tggcgctgca agaaaaaatt cgccggtgcc
      541 accaggcaaa tcaataagcc ggcgagaata aaaaacgcct ggcgccagcc gaagttggcg
      601 attagccatt gagtaagcgg cacgacgatg agtatgccca gaccgatgcc ggacgctgcc
      661 aggccgatgg ccatgccgcg cttgcgcacg aaccaattgg cgagaaaggt cgcctgcgag
      721 gtcatcggca gggcggcgaa gccggcaccg acgagaatgc ccatgccgag ataaaattcc
      781 accaccgtgt cggccagccc gctgacgatc aaccccgcgg ccatgaccag cgcaccgcca
      841 gtcatcaccg gtcgcggtcc atagcggtcg agcaggttgc cgatcatcgg cgccaccacc
      901 gtccacacca gcgaacccaa catcaaggcg cccgaggcga gcgcgcggct ccaatgaaac
      961 tcttcgatga ccgcgatgag aaatacggca aaagcattgc gcgcgccaaa ggccatggcc
     1021 acggtgagaa acgccacgcc gatgacgacc cagggataac aggtttgcat catgcggctc
     1081 ggcgccggcg gggtaatatc agccttcatg attgaagcaa cacggcttga accggattag
     1141 agtaccggag ttctggagta ttggagaaat gggccgagcc cccccgacac tccatcactc
     1201 cactactcca acactccaat cttcttctcc cccaccggta tccactgagc tttttgcgga
     1261 gccggaattt cgcgaatcgc gtggagcaac tcgataactt caccggccaa tggttgccag
     1321 tctgattgct tgggcatgaa cgacaagcgg ccgtcgggcg ccaagcggaa acgatttttt
     1381 tgcttatgaa tgagttcgag cagcttgtcg actttgaccg gcgaatcagc atggaacagc
     1441 aaaaatatct tgccgtcgga gaagctgatc tgctggacga gaaactcttt gagcactcgg
     1501 cgcagattca tcaccagaaa taaattgtcg acgacttcgc tatagggacc gaagcggtct
     1561 tcgatctctg ctttcatctc atcgagctcg ccggcgttct tcaggctcgc caagcgcttg
     1621 taaaaataca gccgctggtt ggcgtcgggc atgtagctat cggggaaata ggccgaaatg
     1681 cccaggcgga tttccggatc gatctccggc aagatctctt cgcctttgag ctcttgaatc
     1741 gccgcctgca tcatctcggt gtaaagctcg aaacccaccg cggtgatctg acccgactgt
     1801 tgatcgccca acagattgcc ggcgccgcgg atttcgagat cgtgcagcgc cagtttgaaa
     1861 cctccaccca ggccgtcgag ctcctgcaat gcgcgcaagc gccgctcggc gtcgggcgtg
     1921 atcgcatgct ccccgggaat caacagataa gcgaatgcat ggcggtgcga gcgcccaacc
     1981 cgcccgcgta gctgatagag ctgcgccaag ccgaagcggt aggcgcggtt gatgatgatc
     2041 gtgttggcgt tgggaaagtc gaggcccgac tcgatgatcg ccgaaca
//
LOCUS       DATIRS010001146         2434 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1266749, whole genome shotgun sequence.
ACCESSION   DATIRS010001146 DATIRS010000000
VERSION     DATIRS010001146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2434)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2434)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2434
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1266749"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..200)
                     /locus_tag="VLM90_14660"
     CDS             complement(<1..200)
                     /locus_tag="VLM90_14660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14268.1"
                     /translation="MFNRADSCHLTFYAIITFLLLGRVSALAQPVRIAVGAASISSLP
                     TWVAQDSGFFTREGVPAELIFIR"
     gene            complement(313..1446)
                     /locus_tag="VLM90_14665"
     CDS             complement(313..1446)
                     /locus_tag="VLM90_14665"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ14269.1"
                     /translation="MKLYNFDLLAYPHVPADAPRTPVPSSYFDPAKGAANYAEHLDEM
                     TYCEELGFDGVVFNEHHYSAYGTMPSPNLIASALSQRTKKIKIGVLGNILPLRNHPVR
                     VAEEYAMIDCLSNGRLIAGFVRGIPPEYIWYGVNPEESRGRFEEAYNLIMTAWTEPVW
                     SHEGKFFKLHDCAIWPRPVQQPHPPIWIAARSAESVEWCVKRHLPCAQVYQTTGQIED
                     TFSYYRTQAKEAGWDAKPEQFILCRHIYIDDSEQKAREFVKPAMDYFFTVFNRGFNEA
                     INKDAVDKQLQAALTSERSFSYFREGNRERFDFSKMDYDGLIKSGYLIAGNPDSVAKQ
                     IQDQMTQVGADHFMGMFHIGNLKHDKVINSLNLFTKEIMPRLH"
     gene            complement(1614..>2434)
                     /locus_tag="VLM90_14670"
     CDS             complement(1614..>2434)
                     /locus_tag="VLM90_14670"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14270.1"
                     /translation="LDVEIIKTNTTAAVQAMLANKMQMATGAGMAAFVTANLEGAPGF
                     TLVGSWVNVFPYKIMAQKGIRKVEDLKGKTGHVGAPFGTIPDTALRFALGRLKIDAEK
                     DVKLVQHSNADPASILAAMEKGEVQFGILAPPFDLIAERRGYEMLLALPGLGIPWQQN
                     GEIVPTAYLKANRDNVVRLMRATADASKFYFDNKEKTLEIMAEYLGRPRDETEYAYNQ
                     FRRWVDKSHRPQVETIKTTLEAIKKNTPKAAGANAASYIDTTIVDQLIKEGFYK"
BASE COUNT          479 a          639 c          747 g          569 t
ORIGIN      
        1 cgaatgaaga tcaattccgc cggcacgccc tcccgagtga agaaaccact gtcctgagcc
       61 acccaggttg gcagtgacga tatgctggcg gcgccgacag cgatgcgcac gggttgggcg
      121 agggccgaaa ccctgcccag caaaaggaaa gtgatgattg catagaatgt taaatggcag
      181 ctatcggctc gattgaacat tcgcagatct ccccgggagt gttggagtaa tggagtggcg
      241 gggtgttgag acttcgagcc catcactcct ctcctccaat actccaattg cgatcgcgcc
      301 gttcgccgct gattagtgca gtcgcggcat gatctctttg gtgaacagat tgagcgagtt
      361 gatcaccttg tcatgtttca ggttgccgat gtggaacatg cccatgaagt ggtcggcgcc
      421 gacttgcgtc atctggtctt ggatctgttt ggcgacgctg tcggggttgc cggcgatcag
      481 atagccggat ttgatcaaac catcgtaatc catcttggaa aagtcgaaac gttcgcggtt
      541 gccttcgcgg aagtagctaa aagaacgttc gctggtcagg gcggcctgca actgtttgtc
      601 caccgcgtct ttgttgatcg cttcattgaa gccgcggttg aagacggtga aaaagtaatc
      661 catcgccggc ttgacgaact cgcgggcttt ttgctcgctg tcgtcgatgt agatatggcg
      721 gcaaaggatg aactgctccg gtttggcgtc ccagcccgct tctttggcct gggtgcggta
      781 gtagctgaaa gtatcctcta tctggccggt ggtctggtaa acctgggcgc agggcagatg
      841 gcgcttgaca caccattcga ccgattccgc gctacgcgcg gcgatccaga tcggcggatg
      901 gggctgttgc acgggccgcg gccagatggc gcagtcgtgc aatttaaaaa atttgccttc
      961 atggctccac accggttcgg tccaggcggt catgatcaaa ttgtaagctt cttcgaagcg
     1021 gccgcgcgat tcttcgggat tgacgccgta ccaaatatat tccggcggga tgccgcggac
     1081 gaagccggcg attaaccggc cgttactcaa gcaatcgatc atggcatatt cttcggcgac
     1141 gcgcaccgga tgattgcgca gcggcaggat gttgccaagc acgccgattt ttattttctt
     1201 ggttcgctgg ctcaacgccg aggcgatcag gttgggcgag ggcatggtgc cgtaggcgct
     1261 gtagtgatgc tcgttgaaaa ccacgccgtc gaagcctagc tcctcacagt aggtcatctc
     1321 atccaaatgc tcggcgtagt tggccgcgcc tttggccgga tcgaaatagc tgctcggcac
     1381 cggcgtgcgc ggcgcgtcgg cgggcacatg cggataggcg agcagatcga aattataaag
     1441 tttcacgaat gatttctcct tgaaacaaac tgcgcggatg ctaacactcg accgtaatgc
     1501 ggtcaaaccg cgtgggggaa aagggtcgag aatggaggat cgcggatgga ggatggatat
     1561 tcagacccgc gattctctat cctccatcgt ctaacctcga cgaatccccc gagctatttg
     1621 taaaatcctt ctttaatcag ctggtcgacg atggtcgtgt cgatataaga ggcggcgttg
     1681 gcgccggcgg ctttgggagt atttttcttg atcgcttcca aggtggtctt gatcgtttcc
     1741 acctgcggcc gatggctctt gtcgacccaa cgcctgaatt ggttgtaggc gtactcggtt
     1801 tcgtcgcggg gacggccgag atattcggcc atgatttcga gagttttctc tttgttgtcg
     1861 aagtagaact tggaagcgtc ggcggtggcg cgcatcagcc ggacgacatt gtcgcgattg
     1921 gctttcaagt acgcggttgg cacgatctcg ccgttctgtt gccagggaat acccaggccg
     1981 ggcaacgcca gcagcatttc atagccgcgc cgctcggcga tcaaatcgaa gggcggcgcc
     2041 aggataccga actgcacctc gcctttttcc atagcggcca ggatgctggc gggatcggcg
     2101 ttggagtgtt gcactaactt gacatctttc tcggcgtcga tcttcagccg gcccaaggca
     2161 aaacgcagcg cggtgtcggg gatggtgccg aagggcgcgc cgacatggcc ggttttgcct
     2221 ttgaggtctt cgaccttcct gatgcctttc tgcgccatga tcttgtaggg aaatacattg
     2281 acccaggagc cgaccaaggt gaacccaggc gcgccttcaa ggttggcggt gacgaaggcg
     2341 gccatgccgg caccggtggc catctgcatt ttgttggcga gcatcgcctg gacggcggcg
     2401 gtggtgttgg ttttaattat ctcgacgtcg aggc
//
LOCUS       DATIRS010001147         3913 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_85586, whole genome shotgun sequence.
ACCESSION   DATIRS010001147 DATIRS010000000
VERSION     DATIRS010001147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3913
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85586"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            57..1031
                     /locus_tag="VLM90_14675"
     CDS             57..1031
                     /locus_tag="VLM90_14675"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14271.1"
                     /translation="MKIAKLGIVVVVAMISWWLLSASAQAQKINIAVSNPDMSFLSGG
                     VAKFKGFFKEEGLDAELVQITANVSIAALAGGNVDYNLILQSVVTGNLRGLPIKVAGI
                     LIERPNHVVVVNPKISRFADLKGKKIAVSSFGSATDILARLTVEHFKLNPSKDVQFIA
                     AGGGSGRLAQLESGLVDAAVVAPPSDAIAESRGFKSLVRTRDILLFPVNGVGLHEQKL
                     KNHRGEVKRVLRALLKANRYILDDKKGAVDILQRWGRTSLAVAEQGYLSSSANFSRNL
                     LVPRDALEKVIHSTKLNIDLKREVSLDEVFDLSIVREILREIGETPKD"
     gene            1038..1637
                     /locus_tag="VLM90_14680"
     CDS             1038..1637
                     /locus_tag="VLM90_14680"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSQ14272.1"
                     /translation="MQRYECLEQLAPLITDQLVVTSLSGQRVEWGHLSKHEGNLLLGS
                     MGNALAVGLGLALALPKRKVIVLESDGSLLLSLFNLPTVANLNPANLAVFVFDNQAYS
                     GTKISEPTATAGKTDLAGMARSAGIAHAITVRDVVAFKSKAAGAIGEAGLRFVVAKVA
                     ESQGHRTIERTNVDLLENKYQFVRYLERTEGKAIFKGRG"
     gene            1674..3878
                     /locus_tag="VLM90_14685"
     CDS             1674..3878
                     /locus_tag="VLM90_14685"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HSQ14273.1"
                     /translation="MPTPRSEGREKVSGAAIYATDVVLPNMLWAKALRSPIAYGRIKK
                     IDVSKALALPGVHGVVTGADVKGQLIGRKIYDMPVLPDEVVRFIGEKVAVVAAETEEI
                     AEAATELIDVHYEELDALLDPLAAVQPSATVLHPNVQSYRGLLHEIKTPSNVFVDLTW
                     TKGDVEAGFRDADLIIENTFTTQPMHQAYIEPHSCVVQAHRAGGADVWACSKVPFALR
                     EQVATALRRPKGDFLMHPSYIGGCFGGKGDFMDVPVCYLLSLKSGRPVKMVMDYAEEF
                     IAGNPRHAAVIDVKTGVNKDGRLIAHRMDYVYDSGAYGAFKPQGYLVGPKEAAGPYKI
                     PNVHINEKIVYTNKIPCGHMRAPGEPQGFFANESQMDLVARRLGMDPIAFRRKNLMHD
                     GDVSPIGHALPHIKSEETLAQALAASGYGKPKRKYIGRGLALAQWLPLGGEGHAFVTM
                     DGRGVITVSTAMVDQGAGTYTAMRQIAANELQVPVEQVRCQILDTSGAAADTGVGASR
                     ATRIFGNATQAAALQVKEKLLQGASEILGVAVDALSFTGSGSIRTNSGKPVSYSAIIE
                     RLGVSIRCEGAYKNFANGPEAALVVQVAEVEVDRETGQVAVKHFTTAHSTGTIINPLM
                     HQGQIDGGVVTAIGYALMEQLVIEQGKVITTNFGENKIPSIRDIPPLKTVIQEFPVGN
                     GPYGGMSIGEPPVLVAAAAIANAVQDAVGVRIYDLPITAEKLLKALKNGVME"
BASE COUNT          846 a         1067 c         1238 g          762 t
ORIGIN      
        1 cggtgagttt acaagctaat gccgttaggg gtgaagggta aggggttagg ggcaagatga
       61 agatagcgaa gttagggatc gtagtcgtcg ttgcgatgat ttcttggtgg ctgctttcgg
      121 cttcggcgca ggcgcagaag atcaacatcg cggtctccaa ccccgacatg tcgtttctca
      181 gcggcggtgt ggccaagttc aagggctttt tcaaagagga aggattggac gcggagctgg
      241 tgcagatcac agccaacgtt tcgattgccg cgctggccgg cggcaacgtc gattacaatc
      301 tgatcctgca atcggtggtt acgggaaacc tgcgcggatt gccgatcaaa gtcgcgggga
      361 ttttgatcga gcggcccaat catgtcgtcg tcgtcaatcc gaaaatctcc cggtttgccg
      421 atctcaaagg gaaaaagatc gcggtgagtt cctttggctc ggcgacggat atcttggcgc
      481 gcctgacggt ggaacatttc aagctcaatc ccagcaaaga tgtccagttc atcgccgcag
      541 gcggcggttc cggaaggctg gcccagttgg agtctggcct ggtcgacgcc gcggtggtgg
      601 cgccgccgtc ggatgcgatc gccgagtcgc gcggtttcaa aagtttggtg cggacccgcg
      661 atattctcct gttccccgtc aacggcgtcg gcctgcatga acagaagttg aagaatcatc
      721 gcggcgaagt gaagcgcgtg ctgcgcgctc tgctcaaggc gaaccggtac attctcgacg
      781 acaagaaggg cgccgtcgat attctccagc gttggggacg cacgtccctg gcggtggcgg
      841 aacagggata tctatcgtcg tcggcaaatt tcagccgtaa cttgctagtg ccgcgggatg
      901 ccttggagaa agtcattcat agcaccaagc tcaacatcga tcttaaacgc gaagtgtcgt
      961 tggacgaggt gttcgatctc agcattgtcc gggaaatact cagagaaata ggcgagacgc
     1021 ccaaagatta gctaaccatg cagcgttacg aatgtctcga acagttggct ccgttgatca
     1081 ccgatcaact cgtggtcaca tctctgagcg gacagcgcgt tgaatgggga catttgtcca
     1141 agcatgaggg aaatttgctc cttggctcga tgggcaatgc gctcgccgtc ggcttggggc
     1201 tggcgctggc gctgccgaaa cggaaagtca tcgtgctcga gtccgacggc agcttgctgc
     1261 tgtcattgtt caacttgccg acggtggcga acctgaatcc ggcgaatctt gccgtcttcg
     1321 tcttcgacaa ccaggcttac agcggcacca agatcagcga acccacggcg acggcgggca
     1381 agaccgactt ggcgggaatg gcgcgcagcg cgggaatcgc acacgctatc accgtgcgcg
     1441 atgtcgttgc gttcaagagt aaagcagccg gagcgatcgg cgaagctggg ctcagatttg
     1501 tcgtcgccaa ggtggcagag agccaaggtc atcgcacgat cgagagaacc aacgtcgatc
     1561 tgctggaaaa taaatatcag tttgtccgct acctggagcg caccgaaggc aaggcgatat
     1621 tcaagggaag gggttagttt ttcgtggcag tgaacccgcg caaggtcatt ggagtgccga
     1681 cgccaagatc ggaaggccgc gagaaagttt ccggtgcggc gatttatgcc acggacgtag
     1741 tcctccccaa catgctctgg gcgaaagcgc tgcgcagccc aatcgcttac gggcgaatca
     1801 aaaaaatcga tgtcagcaaa gcgctggcgc tgccgggcgt tcatggcgtg gtgaccggcg
     1861 ccgatgtcaa aggccaactc attgggcgca aaatctacga catgccggtt cttcccgatg
     1921 aggtcgtgcg cttcatcggc gagaaggtcg cagtggtcgc ggcggagact gaggagatcg
     1981 ccgaggccgc gaccgaattg atcgatgtgc actatgaaga gttagacgcg ctcctcgatc
     2041 cgctggcagc ggtgcagccg agcgcgacgg tgctgcatcc caacgtgcaa agctaccgcg
     2101 gcttgctgca cgaaatcaaa accccgagca atgtcttcgt cgatttgact tggaccaagg
     2161 gcgatgtcga agcggggttc cgcgacgctg acttgatcat cgaaaacact ttcaccaccc
     2221 aaccgatgca tcaggcttac atcgagcccc attcttgcgt cgtgcaggcg catcgcgcgg
     2281 gcggcgccga tgtctgggct tgttccaaag tgccatttgc cctgcgcgag caagtcgcca
     2341 cggcgttgcg ccggccgaag ggtgattttc tcatgcaccc cagttacatc ggcggctgct
     2401 tcggcggcaa gggcgacttc atggacgtgc cggtgtgcta tttgctatcg ctcaagagcg
     2461 gccggccggt gaagatggtg atggattatg cggaagagtt catcgccggc aatccacgcc
     2521 acgccgctgt gatcgatgtg aagaccggcg tgaacaaaga cggccggctg atcgcgcacc
     2581 gcatggatta tgtctacgac agcggcgcct acggcgcgtt caaaccgcaa ggatatttag
     2641 tcggacccaa agaagcggcc gggccgtaca agatccccaa cgttcacatc aacgagaaaa
     2701 tcgtttacac caataaaatc ccctgcggcc atatgcgcgc gccgggtgag ccgcagggct
     2761 ttttcgccaa cgaatcgcaa atggacctgg tggcgcggcg gctgggcatg gacccgatcg
     2821 cattccgacg gaaaaatctc atgcatgacg gcgatgtttc gcccatcggc cacgcgctgc
     2881 cgcatatcaa gagcgaggag actttggcgc aggcgctggc ggcgtcgggt tacggtaagc
     2941 caaaacgaaa atatatcggc cgcggcttgg cgctggcgca atggctgcca ctgggcggtg
     3001 aagggcatgc gttcgtgacc atggatgggc gtggcgtcat caccgtgtcg accgccatgg
     3061 tcgaccaggg cgcgggcacc tacacggcga tgcggcagat cgccgccaat gagctgcaag
     3121 tgccggtaga gcaagttcgt tgtcaaattc tcgacaccag cggcgctgcg gcggataccg
     3181 gtgtcggcgc tagcagggcg acgcggatat tcggcaatgc gacgcaggcc gcggcgcttc
     3241 aagtcaaaga gaaactgttg cagggcgcga gcgaaatcct cggggtggcg gtcgatgcgc
     3301 tttccttcac tggcagcgga tcgattcgca ccaacagcgg caaaccggtc tcttacagcg
     3361 ccatcatcga acggctcggc gtttcgattc gctgcgaagg tgcgtacaaa aatttcgcta
     3421 acggtcccga agccgctctg gtcgtgcaag ttgccgaagt cgaggtcgac cgtgagaccg
     3481 gccaggtggc agtgaaacac tttaccaccg cgcatagcac cggcacgatc atcaatccgt
     3541 tgatgcacca agggcagatc gacggcggcg tcgtaaccgc gatcggttat gcgctgatgg
     3601 agcagctggt cattgagcaa ggcaaagtaa tcaccaccaa cttcggcgag aataagattc
     3661 cctccatccg cgacatcccg ccgctgaaaa cggtcatcca agaatttccc gtcggcaacg
     3721 gcccctatgg cggcatgagc atcggcgagc cgccggtgct ggtggcggcg gcggccatcg
     3781 ccaatgcggt tcaggatgcg gtcggtgtgc ggatttacga tctgccgatc acggcggaaa
     3841 agctattgaa ggcgttgaag aatggagtga tggagtgatg gggcattgga gtgttgggcc
     3901 gggaaaccgt cac
//
LOCUS       DATIRS010001148         4735 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1758509, whole genome shotgun sequence.
ACCESSION   DATIRS010001148 DATIRS010000000
VERSION     DATIRS010001148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4735
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1758509"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(480..1019)
                     /locus_tag="VLM90_14690"
     CDS             complement(480..1019)
                     /locus_tag="VLM90_14690"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HSQ14274.1"
                     /translation="MSRIPHAKRDELSPEQQKIWDHIHAVRTGGGGPYSMLLHVPALA
                     ATVAATEDYFRLDSALSDADREIVILAAARELGAHYPWVRHEARARQVGVRTEVIETL
                     RAQGSRAGFTPREQLLTDIPLSLAREHGLSDELFARAERELTRRQLVEVIGLVGHYST
                     ISFVANTFQIPKPEGSQTF"
     gene            complement(1199..2104)
                     /locus_tag="VLM90_14695"
     CDS             complement(1199..2104)
                     /locus_tag="VLM90_14695"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSQ14275.1"
                     /translation="MAESSSPVTAPRVKGPLVWLGMDQQELDDAYDQTVYAPNQPLLA
                     KRRAAASESVLKQFPPERVAYGSSEHEKLDIYKTHKPNAPVNVYVHGGAWRHGQAKDC
                     ASPAEMFIDAGANFVVLDFVQIQDTGGNLLPMAQQVRNGIAWVYKNAASFGADADRVY
                     ITGHSSGAHLSGCALVTDWQNDFGLPSDIIKGGLLISGMYDLKPVRLSKRSEYVKFTD
                     EVEHALSSQRHLDKLHAPITVCYGTQETPEFQRQARDFAAAVKAAGKPVELLVGESLN
                     HFEMQETLGNPYAIGGRAALKMMGL"
     gene            complement(2218..2616)
                     /locus_tag="VLM90_14700"
     CDS             complement(2218..2616)
                     /locus_tag="VLM90_14700"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HSQ14276.1"
                     /translation="MLRKLSAYEPQAYAIMRIIVGLLFVCHGLQKAAGAFGGVNGEPA
                     PLFSLLSIAGYLELALGLMIAMGIFTVAAAFLASGQMAAAYFIGHFPMGYWPIMNQGE
                     VAVLYCFVFLYIAARGPGIWSVDMFGSATR"
     gene            complement(2631..3698)
                     /locus_tag="VLM90_14705"
     CDS             complement(2631..3698)
                     /locus_tag="VLM90_14705"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ14277.1"
                     /translation="MQIIDADGHVNDRPCMDEISKFMPAGNRTQVFPAFDHIHFHYLE
                     GGDKRSRTGDVGPEEWLDFLDETEIDWTVVYPTAGLAVGRIIAEDWAIAACRAYNNWL
                     YEKFTKVTPRIKGMALIPIQDTQAACEELRRAVKELGMAGAMLPSNGEGIKGHFGSKI
                     YWLIYEEAEKLNAPLAVHVGALHHLGMDSIGVYYPVHALGHPFGIMAQAAAMLSYGVF
                     DRFPKLRVGFLEGGATWVPFFMDRLDRSYPHHLQVDIHGEFLPSSHPDVMASEYFRRQ
                     IKAGKIFVGFDGDDHGLGYAVKEAGNESFVFATDFPHESFDAKSCRIELQHILSREDL
                     SQPDKEAILGKNAIIFFGVER"
     gene            3874..>4735
                     /locus_tag="VLM90_14710"
     CDS             3874..>4735
                     /locus_tag="VLM90_14710"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ14278.1"
                     /translation="MISVRTFLILIATLVASNGFTQDAKTIDAANKEGGKVVIYGSLE
                     SQVVDEVLAGFRKKTGLNAEYWRASAMSVMNRSMSEYRAGAPLYDIVMNNSDPLVIMA
                     NEGMIAKYDSPTAKKYPKEQIDARLGPVSRYGIVGVVFHKGSIKAEDAPRSLDDLVSA
                     KYKGMLVMADPTLHVTTIQWLSSLHKIMPKERADKFIRDLAATKPTLVESMLPAAERM
                     ANGEFPIALTFVKYAYTAAKGGAPLDYVRLDRMLGDAHYAVLSNKAPRPSAGKAFIDY
                     YLDDDNMKVLA"
BASE COUNT         1006 a         1286 c         1413 g         1030 t
ORIGIN      
        1 tgaaaataga ggggtttcct tctaccaccc caccatggtc cgttattttc aaaggatgac
       61 accaaggtcc gaggtggaat tttccggcct caggatcacc atcgtcgttg catcgaagga
      121 aagagggcgg gtttaaaatc cgcccctacg agcccgattc ttctttgtgt actttgcact
      181 actatagttg acaatttgcc cggctcgcgc aaattgtctt agctcagaac ggctaggatt
      241 cggatattcc tcgcgccaag gacgccaagg tcgcaaagtg acgggccgag tccggtcatc
      301 ccgatcggat gcgagagata tcggaaagat ttctcccttc ggtcgaaatg acatattccc
      361 cttacctttg cgccctttgc gtgctttgcg cgagctgtcc gagtctcggt tgcagcggtg
      421 ccgcgctggc acctttgtgg tgaattctct ttcgaaccaa tctcagatga agatctactc
      481 taaaacgtct ggctgccttc gggcttgggt atttggaagg tgttggcgac gaagctgatg
      541 gtgctgtagt ggccgactag gccgatgact tcgacgagtt gtcgacgagt caactcgcgt
      601 tcggcgcggg cgaagagttc atcggacaag ccatgctcgc gtgccaggct cagtgggatg
      661 tcggtcagaa gttgctcgcg cggcgtgaag ccggcgcgag aaccttgggc gcgcaaggtc
      721 tcgatcacct cagtgcgcac gccgacttga cgggcgcgcg cttcgtggcg cacccaggga
      781 tagtgcgcgc cgagctcgcg cgccgcggcg aggatgacga tctcgcggtc ggcatcgctg
      841 agcgccgaat ccaagcgaaa ataatcttcg gtggcggcga cggtggcggc gagcgcgggc
      901 acatggagta acatcgaata aggcccaccg ccgccagtgc ggacggcgtg gatgtgatcc
      961 caaatctttt gctgttcggg cgacaattca tcgcgcttag cgtgggggat gcggctcatg
     1021 gttcctcctg tgcaatcact ctgtaggctt tgtgtggcct tggtgccacg gttgataaga
     1081 tttttcacca cgaagttcac gaagggcttg gatactaatt attccgaact tcgtgctctt
     1141 cgtgtccttc gtggtgagga cttcttcatc gaaaacctga aagaaacgac aacatctact
     1201 acagacccat catcttcagt gccgcccggc cgccgatggc gtagggattg cccagggttt
     1261 cctgcatctc gaagtgattc aagctttcgc cgaccaggag ttccaccggc ttaccggcag
     1321 ctttcaccgc ggcggcgaag tcgcgggctt ggcgctgaaa ctctggcgtt tcttgggtgc
     1381 catagcagac ggtgatgggc gcatgcagct tatcgagatg gcgttgcgag ctgagcgcgt
     1441 gctcgacctc gtcggtgaat ttcacatact cgctgcgctt cgatagccgc actggtttca
     1501 aatcgtacat gccgctgatc aacaatccac ctttgatgat gtccgacggc aggccaaaat
     1561 cattctgcca gtcggtgacc agcgcgcagc cgctcaggtg cgcgccggag gaatggccgg
     1621 tgatgtagac gcgatcggca tcggctccga agctagcggc gtttttatag acccaggcga
     1681 tgccgttgcg gacttgctgc gccatcggca gcaggttgcc gccggtgtct tgaatttgca
     1741 cgaagtcgag gacgacgaaa ttcgccccgg cgtcgataaa catctcggcg ggagaggcgc
     1801 agtctttggc ttggccgtgg cgccaggcgc caccgtggac gtagacattc accggcgcgt
     1861 tgggcttatg agttttgtag atatcgagct tttcatgctc gctggagccg taggcgacgc
     1921 gctccggcgg aaattgtttc aacaccgact cgctggcggc ggcgcggcgc ttggcgagca
     1981 aaggttgatt gggcgcataa accgtctggt cgtaggcgtc atcgagctct tgttgatcca
     2041 tgccgagcca gacgagcggg cctttgacgc gaggtgcggt tacgggtgaa gaactttctg
     2101 ccatgaatac tcctaagttt tcccagaatc gttaacggtg cgatttaatc acaaagcctc
     2161 cgtccagtac aaaggttaaa attaaggacc ctgtgagcta tgtatctcga ttgacaatca
     2221 ccgcgtcgcg ctgccgaaca tatcgacgct ccagatgccc ggaccgcgcg cggcgatata
     2281 cagaaacacg aaacagtata agaccgctac ttcaccttga ttcatgattg gccaatagcc
     2341 cattggaaaa tggccgatga agtaggccgc ggccatttgg ccactggcta gaaacgcggc
     2401 ggcaacggta aatatgccca tggcaatcat caaacccagt gcgagttcga ggtagccggc
     2461 gatactgagt aagctaaaca atggcgccgg ctcgccgttg acgccgccaa aggcgccggc
     2521 agctttctgt aaaccgtggc agacaaatag tagcccgacg ataatgcgca tgattgcgta
     2581 ggcttggggc tcgtaggcgg acaattttcg cagcacgggt gattctccgt tcagcgctcg
     2641 acgccgaaaa aaattatggc attttttccc agaatcgctt ctttatcggg ctgactgaga
     2701 tcttcgcggc tgagaatatg ctggagctcg atgcggcagg atttggcatc gaagctctcg
     2761 tgcggaaagt cggtggcgaa gacgaacgac tcgttgcccg cttctttgac cgcgtagccg
     2821 aggccatgat cgtcaccgtc gaagccgaca aaaattttgc cggctttgat ttgccggcgg
     2881 aaatattcgc tggccatcac atcagggtgc gagctcggca ggaattcgcc atgaatgtcg
     2941 acctgcagat gatgcgggta ggagcggtcg agacggtcca tgaagaacgg cacccaggtc
     3001 gcgccgcctt cgaggaaacc gacgcgcagt ttggggaagc gatcgaacac gccgtaggac
     3061 agcatcgccg ccgcttgcgc catgatcccg aacggatggc cgagggcatg caccggatag
     3121 taaacgccga tgctgtccat gcctaaatgg tgcagcgcgc cgacgtgaac cgccaacggc
     3181 gcgttaagtt tctcggcttc ctcgtagatc agccaataga tctttgagcc gaagtggcct
     3241 ttgatgcctt cgccgttgga tggcagcatg gcgccggcca tgccgagttc ttttaccgcg
     3301 cggcgcaatt cttcacaggc ggcttgagta tcttggatcg ggattagcgc catgcctttg
     3361 atgcgcggcg taaccttggt gaatttttca taaagccaat tgttataagc gcggcaagcg
     3421 gcgatagccc agtcttcggc gatgatccgg ccgacggcta atcctgccgt gggatagacg
     3481 acggtccaat cgatctcagt ttcgtccagg aagtcgagcc attcttcggg gccgacatcg
     3541 ccggtgcgcg aacgcttgtc gccgccttcc aagtaatgaa agtgaatgtg atcgaaagca
     3601 ggaaatacct gcgtgcgatt gcccgccggc atgaatttag atatttcgtc catacagggg
     3661 cggtcgttga catggccgtc ggcgtcgatg atttgcattg tttgagcacc tttcgttggg
     3721 actttcatcg gctataacaa gttgacttcg cccatgtcaa cgcgggcggg ttcaattgtg
     3781 gcagagttca acagtttaaa ggttcaaggt tcaatgttga ccggaaaatt gctgacgtga
     3841 tagtggcagt ggagtaactc agcggaggtg accatgatct cagttcgcac atttctaatt
     3901 ctcatcgcga ccttggttgc gagtaatggc tttacccagg atgcgaaaac catcgacgcg
     3961 gccaataagg aaggcggcaa ggtggtgatt tacggctcgc tcgagagcca ggtggtggat
     4021 gaagtgttgg ctggctttcg caagaagacc gggctcaacg ccgagtactg gcgcgcttcg
     4081 gcgatgagcg tgatgaaccg gtcgatgagc gagtaccgcg ccggcgcgcc gctctacgac
     4141 attgtcatga ataactcgga tccgctggtg atcatggcca acgaagggat gatcgccaag
     4201 tacgactcgc cgacggcgaa aaaatatccc aaggagcaga tcgatgcgcg gctcggcccg
     4261 gtgagccgct acggcatcgt cggcgtggtc tttcacaagg gctcgatcaa agccgaggac
     4321 gcgcccaggt cgctcgacga tctggtgagt gcgaaataca aaggcatgct ggtgatggcc
     4381 gatccaacat tgcacgtcac gacgattcaa tggttgtcga gcttacacaa gatcatgccc
     4441 aaggaacgcg ccgacaaatt catccgcgat ctggcggcga cgaagccgac cttggtcgag
     4501 tccatgctgc cggcggccga gcgcatggcc aacggcgagt ttcccatcgc cctgaccttc
     4561 gtcaagtacg cctataccgc ggctaagggc ggcgcgccgc tagattatgt gcgcctcgat
     4621 agaatgctcg gcgacgccca ctacgccgtg ctcagcaaca aagcgccgcg cccgagcgcc
     4681 ggcaaagcgt tcattgacta ctacctcgac gacgacaaca tgaaggtcct cgctc
//
LOCUS       DATIRS010001149         2038 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1856216, whole genome shotgun sequence.
ACCESSION   DATIRS010001149 DATIRS010000000
VERSION     DATIRS010001149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2038
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1856216"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            303..>2038
                     /locus_tag="VLM90_14715"
     CDS             303..>2038
                     /locus_tag="VLM90_14715"
                     /inference="COORDINATES: protein motif:HMM:NF013259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSQ14279.1"
                     /translation="MNKIEEYKKEKAGLDILGDIPRYAAAGWESITDGDKERLKWAGI
                     FFRRQTPGRFMMRLRFANGFITAAQLRTIGEISRDFGKAFADITTRQQIQLREFTIND
                     VPEIWRRLRAVDLISLQTGMDNIRGVIGCPVAGLTPNELFDASPVARQFTDLFIGNRA
                     YTDLPRKFNVTITACKEACTHAEAQDLALTPALKEINGVPVKGFNVAVGGKLGSGGFR
                     MASPLDLFVTPDEAAAVCSHIVMIFSDHGARELRTKARLAFLIEEWGVAKFRMELERR
                     VDRPLASAGKDQRTPKHTDHVGVFRQQQAGLNYVGLAVPVGRMTSEQMQQVADLAENY
                     GSGQLRLTVGQNVIISDVPDAKIGALTDEPVLRELRYDPSEVMRGLVSCTGMDFCHFA
                     LIDTKGWALKTARLLETKLGKTQPLRMHWSGCPASCGNHTIADIGLLGKNIKLNGEVV
                     EAVDVFAAGAAGCEANFPVKIMEDVPCEDLPEVIAGLVKHGAFKAMRQQLRKIPQAVA
                     LGKKPEIELKAAKTLIRADEIKEGAAKLVRVKNEEIAVFKHQGKLCALQNLCPHEGGQ
                     LSAGWIEEGAVV"
BASE COUNT          455 a          536 c          611 g          436 t
ORIGIN      
        1 gacccgccgg ccgtccgcga ccttccggag ccaaaaaatg gattgttgac tttcaatctg
       61 ttaccgacgt ggagattcct gagctgtcgc caggcgatct aacgatcagg acggattctg
      121 gactagcggg ttggcaatcg cgccgatcca tgccgtgttc tgacgtttgc ctaaattgtt
      181 ggcggtaggc gaataaacca taggcaagcc gcgttcgagt cgaacgtcaa aggtgctgaa
      241 tttattttat tattgccgat tcacatggcg gcataagcgt tgcgtataga gcatcgcgag
      301 agatgaacaa gattgaagaa tataagaagg agaaagccgg cctcgatatt ctcggtgaca
      361 taccgcgcta cgccgctgca ggatgggaaa gcatcaccga cggtgacaag gagcgtttaa
      421 aatgggccgg gattttcttt cggcggcaga ctcccgggcg ctttatgatg cggctgcgct
      481 tcgccaacgg cttcatcaca gcggcgcagc tgcgcaccat cggagaaatt agccgcgact
      541 tcggcaaagc cttcgccgat attacgacgc gccagcagat tcagttgcgc gaattcacaa
      601 tcaacgatgt gccggagatc tggcggagac tgcgcgccgt cgatttgatt tctttgcaga
      661 ccggcatgga taacattcgc ggcgtgatcg gctgcccggt ggccggtctc actcccaatg
      721 agttgttcga cgcttcgcca gtggcgcgcc agttcaccga cttgtttatc ggcaaccggg
      781 cctatacgga tttgccgcgc aaattcaatg taaccattac tgcttgtaaa gaagcttgca
      841 cccacgccga agcgcaggat ttggctttga cgccggcgtt gaaagaaatt aacggcgtgc
      901 cggtgaaggg cttcaacgtc gccgtcggcg gcaagctcgg ttccggcggt tttcgcatgg
      961 cgtcgccgtt ggatttattc gttacacccg atgaagcggc ggcggtctgc tcgcatatcg
     1021 tcatgatctt cagcgaccat ggtgcgcgcg agctgcgcac caaggcgcgc ttggcatttc
     1081 taatcgaaga atggggcgtg gcaaaatttc gcatggaatt ggaacgtcgc gtcgatcgcc
     1141 cgcttgcctc ggcgggaaaa gatcaacgca cgccgaaaca caccgatcat gtcggcgtgt
     1201 ttcgccagca acaggcgggg ctgaactatg tcggtttagc cgtgcctgtt gggcgcatga
     1261 cttcggaaca gatgcagcag gtggctgact tggccgaaaa ctatggcagc ggccagttgc
     1321 gtctgacggt cgggcagaac gtgattatct ccgatgttcc cgacgctaag atcggcgcgc
     1381 ttaccgacga gcctgtgctc cgggagctac gctacgatcc ctccgaagtc atgcgcggtc
     1441 tggtgagctg cacgggcatg gatttctgtc acttcgcttt gatcgacacc aaaggctggg
     1501 cgctcaagac cgcgcgtttg ctggaaacaa aattgggtaa aacacagccg ctgcgcatgc
     1561 attggtctgg ttgtccggcg agctgtggca atcacaccat cgccgacatc ggactgctcg
     1621 gcaagaatat caaactcaac ggcgaagtgg tcgaagcggt cgatgttttc gccgccggcg
     1681 ccgccggttg tgaagccaat ttcccagtga agatcatgga agatgtgccc tgcgaggatc
     1741 tcccggaggt gattgccggc ttggtgaaac atggcgcgtt caaggcgatg cgccagcagc
     1801 tgcgaaaaat tccccaagcg gtggcgctgg gcaaaaagcc ggaaattgaa cttaaagccg
     1861 ccaagacgct gattcgcgct gatgaaatca aagaaggcgc ggcgaagcta gttcgagtga
     1921 aaaatgaaga aatcgccgta ttcaaacatc aaggcaagct ttgcgcgctg caaaatcttt
     1981 gtccccatga gggtggccaa ttgtctgccg gctggatcga agaaggcgcg gtggtctg
//
LOCUS       DATIRS010001150         1562 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1463199, whole genome shotgun sequence.
ACCESSION   DATIRS010001150 DATIRS010000000
VERSION     DATIRS010001150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1562
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1463199"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1185
                     /locus_tag="VLM90_14720"
     CDS             <1..1185
                     /locus_tag="VLM90_14720"
                     /EC_number="3.4.13.19"
                     /inference="COORDINATES: protein motif:HMM:NF013413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070573 - metallodipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase"
                     /protein_id="HSQ14280.1"
                     /translation="ITLDTHIDFAPANLVGEQNYTQRLDTQFNLPNMIDGGLDGLFFV
                     VYVGQTRETQNPEALKAPGFERAYKLALEKFDAVHRFTKEIAPDKIELALDAADVRRI
                     NAQGKKIALIGVENGYPLGEDIAYVKEFYDRGARYLSLTHNGHNQLADSHTGERDGWK
                     WNGVSPLGKQTIAEMNRLGIMVDVSHASKDSMMQTAALSKAPIIASHSGVRALCDVSR
                     NVDDEQLLALKQTGGVFQAVAYGGFVKTTKPDSSERTAARAAAKREHNLPDSSGPGQQ
                     GRLQAALMQMPDEQRAEYEKKLTEIDRQHPGDPAATVKDFVDHIDHAVKLIGIDHVGI
                     SSDFDGGGGIVGWNDASETFNVTLELVRRGYAEKQIEKLWGGNLLRVMDEVQRIASAL
                     QQ"
     gene            1304..>1562
                     /locus_tag="VLM90_14725"
     CDS             1304..>1562
                     /locus_tag="VLM90_14725"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSQ14281.1"
                     /translation="MTIRSFDHVAIPIQNTDAMLAFYRALGFGVKEREQFYSVHFGDH
                     KINFHGPERWQSGRFTLRGPTAIPGCGDFCFVWDGSAESLRD"
BASE COUNT          366 a          462 c          444 g          290 t
ORIGIN      
        1 atcacactcg atactcacat cgattttgcc ccggccaatc ttgtcggtga gcagaattac
       61 acgcaacgcc tcgatactca gttcaacctg cccaatatga tcgacggcgg gctcgatggg
      121 ctgttcttcg tcgtctacgt cggtcagaca cgggagacac agaatccgga ggcactcaaa
      181 gcccctggct tcgaacgcgc ctacaaattg gcccttgaaa aattcgacgc ggtccatcgc
      241 ttcactaagg agatcgcgcc ggacaagatc gagctggcgc tcgatgccgc agacgtgcgc
      301 cggatcaacg cacagggaaa gaaaattgct ctgatcggcg tcgagaacgg ctatccgctc
      361 ggcgaagaca ttgcgtacgt caaggaattc tacgaccgcg gcgcgcgtta tctgtcgctc
      421 acccacaacg gccacaatca gctcgccgac tcacacaccg gcgagcgcga cggatggaaa
      481 tggaatgggg tttctccgct cggcaagcaa acgatcgccg aaatgaaccg gcttggcatc
      541 atggtcgatg tttcgcatgc gtccaaagac tccatgatgc aaaccgccgc gctttccaag
      601 gcgccgatca tcgcctccca ctccggcgtc cgcgcgctct gcgacgtgag ccgcaacgta
      661 gacgacgagc aactgctcgc gttgaaacaa accggcggcg ttttccaggc cgtcgcctac
      721 ggcggcttcg tgaaaacgac gaaaccggat tcttccgagc gcaccgcggc ccgcgcagcg
      781 gcaaagaggg agcacaatct tcccgattca tcgggcccag gccaacaagg gcggttgcaa
      841 gcagcgctaa tgcaaatgcc ggatgaacaa cgcgccgaat acgaaaaaaa acttaccgag
      901 atcgatcggc aacaccccgg cgatccagct gcgacagtca aagatttcgt cgatcacatc
      961 gaccacgctg taaagttaat cggcatcgac cacgtcggca tctcctccga cttcgatggc
     1021 ggcggcggta tcgtcggctg gaacgacgcc agcgaaacgt tcaatgtgac gctggagcta
     1081 gtccgccgcg gctacgcaga aaagcaaatc gagaaacttt ggggcggcaa tctgctgcgg
     1141 gtcatggacg aagtccagcg catcgcaagc gcgctgcagc aataaccgct gcccaagtag
     1201 ggtgcgcttg cgcaccgttc ccggagcgtt ggataaattg attttttcga cgagccggaa
     1261 tatgacgctc ctgtagaacg gttaagatta cggggagggc cctatgacaa ttcgcagctt
     1321 cgatcacgtt gcgataccga tccagaacac agacgcgatg ctggcgttct accgagcgtt
     1381 gggattcggc gtgaaggaga gagagcagtt ttactcggtt cacttcggcg atcacaagat
     1441 caattttcac ggtcccgaaa gatggcagag cggacgcttc acgctgcgcg ggccgaccgc
     1501 catacccggc tgtggtgact tctgctttgt ttgggatggt tcggccgagt cgctacggga
     1561 tg
//
LOCUS       DATIRS010001151         2464 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1267010, whole genome shotgun sequence.
ACCESSION   DATIRS010001151 DATIRS010000000
VERSION     DATIRS010001151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2464)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2464)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2464
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1267010"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..687
                     /locus_tag="VLM90_14730"
     CDS             <1..687
                     /locus_tag="VLM90_14730"
                     /inference="COORDINATES: protein motif:HMM:NF013895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HSQ14282.1"
                     /translation="KAVQHGESALAVVNGEGRFIGFLTPDRLHAVLLHEHDEDLARLG
                     GFLRDSSMARTASEEPVVKRFWHRVPWLLVGLLGALLAADIVGAYEQQLQANVMLAFF
                     IPGIVYLADAVGTQTEALVIRGLSVGVSIGGVVRREVYTGLLVGVTLAAVFFPIGLWR
                     WGDASMVAAVALAILAACTTASAVALTLPWLLNRLGLDPAFGSGPLATVIQDLLSVII
                     YLRIATAMLH"
     gene            complement(750..1850)
                     /locus_tag="VLM90_14735"
     CDS             complement(750..1850)
                     /locus_tag="VLM90_14735"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HSQ14283.1"
                     /translation="MSNTFEFADELGPIKIVHIYDPKHGLKAVVAIDNVARGPSIGGI
                     RMAPDVSAEEAFRLARAMTLKNSAANLPHGGGKSVIFGDPKMAPAKKELLIRAFARAI
                     RDLVEYIPGPDMGTDERCMAWIKDEIGRAVGLPPEIGGIPLDELGATGLGLKASVEAA
                     MQHCDFKLNGARVVVQGFGSVGKHAARFLGEKGAILIAACDSHGTIFNPKGIDVGRLI
                     ALKDAGKNVSDYSDGEKLAVDAVIDIECEIWIPAARPDVIRRDNVARLKTKLVPQGAN
                     IPFTAEAERILHKAGTLVLPDFIANAGGVICASVEYHGGTQSQALQIIQEKIYANTEE
                     VLANAKKTGSLPRQAAVELAEARIKKAMTYQK"
     gene            complement(1893..2450)
                     /locus_tag="VLM90_14740"
     CDS             complement(1893..2450)
                     /locus_tag="VLM90_14740"
                     /inference="COORDINATES: protein motif:HMM:NF022321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2703 domain-containing protein"
                     /protein_id="HSQ14284.1"
                     /translation="MDASSHALKKEQPSCCGTISQPIAEQPKDRVAIDFLYLDLSECD
                     RCQGTNEQLESALPIITQTLEASGFAVEVRKIHVQSAQQAAALGFDVSPTIRVNNRDI
                     QFTWRETPCAPCSKGCASEVSCREWEYGGQWHEIPPKELMIRSILREVYGQPALAAPE
                     ALAKTVVSDNLKRFFAKQSCCWTSE"
BASE COUNT          440 a          681 c          743 g          600 t
ORIGIN      
        1 aaagcggtgc agcatggcga aagcgcgctg gcggtggtta acggcgaagg acggtttatc
       61 ggttttttga cgcctgaccg gttgcatgct gtgttgctcc acgagcacga cgaagatttg
      121 gcccggctcg gcggtttcct gcgtgactcg tcgatggcac ggacggccag cgaagagccg
      181 gtggtaaagc gcttttggca ccgcgtgccg tggctattgg tggggctgtt gggcgctttg
      241 ctggccgccg atatcgtcgg cgcctacgag cagcaacttc aggcaaatgt aatgttagcg
      301 ttctttattc ccggcattgt ctatcttgcc gacgcagtcg gaacgcagac ggaagctcta
      361 gtcatacggg ggctgtccgt aggtgtatcg attggcggcg tggtgcggcg tgaagtgtat
      421 accggtttgc tggttggagt caccttagcg gcggtctttt ttccgattgg actctggcgc
      481 tggggcgatg caagcatggt cgccgcagtg gcccttgcga ttctagcggc ttgcacgacg
      541 gcgagcgcgg ttgcgctcac gttgccatgg ctgttaaacc ggctcggcct tgatccggcg
      601 ttcggcagcg gcccgctggc aacggtgatt caagatttac tgtccgtgat catttatctg
      661 cggattgcca ccgcaatgct gcattagatg agtcatgagg ctctagccgt tcaatacgtt
      721 caaatggttc aagccggcgc atcattccgt cacttttgat atgtcatcgc cttcttgatc
      781 cgcgcctccg ccaattcaac tgcggcttga cgcggcagcg aaccggtctt cttggcattg
      841 gccagcacct cttcggtatt ggcgtaaatc ttttcttgaa taatctggag cgcttgtgat
      901 tgtgtgccgc cgtggtattc caccgacgcg cagatgacgc cgccggcgtt ggcgatgaag
      961 tccggcaata ccagcgtccc ggctttgtgc aggatgcgtt ctgcttccgc cgtaaacgga
     1021 atgttcgctc cctgcggcac caacttggtt ttcagccgcg ccacattgtc tcggcggatg
     1081 acatccggac gggcggcggg aatccagatc tcgcattcga tatcgatcac ggcgtcgaca
     1141 gcgagctttt caccgtcgga ataatcgcta acgtttttgc cggcgtcttt gagcgcgatc
     1201 agacggccaa cgtcgatccc cttcggattg aaaatcgtgc catgagagtc gcaggcggcg
     1261 atcaaaatgg cgcctttttc gccgagaaag cgcgctgcat gtttgcccac cgagccgaag
     1321 ccttgaacga ccacacgcgc gccgttgagc ttgaagtcgc aatgctgcat cgccgcttcg
     1381 acgctggctt tgagccctaa gccggtggcg ccgagctcgt cgagggggat gccgccgatc
     1441 tccggcggca ggccgacggc gcggccgatt tcgtctttga tccacgccat gcagcgctcg
     1501 tcggtgccca tgtcggggcc ggggatatat tcgaccagat cgcggatggc gcgggcgaag
     1561 gcgcggatga gtagttcttt tttcgccggc gccatcttag gatcaccgaa gatcactgac
     1621 ttgccgccgc catggggtag atttgccgcc gagtttttca gcgtcatggc gcgggctaaa
     1681 cgaaacgctt cctcggcgct gacatccggc gccatgcgaa tgccgccgat ggacggaccg
     1741 cgggcgacgt tgtcgatggc gaccacagct ttgaggccat gcttgggatc gtagatgtgg
     1801 acgattttaa tcggtcccaa ttcgtcggca aattcgaatg tgtttgacat gaatccctct
     1861 caggtgttgt cttcgtgctg tgctgcttgg tcttactccg atgtccaaca acaggattgc
     1921 ttggcgaaaa atcgtttcaa attgtccgag actacggttt tcgctagagc ctccggcgcc
     1981 gctaacgcgg gttgtccgta aacttcgcgg aggatgctcc ggatcatcaa ttctttcggc
     2041 gggatctcgt gccattgccc gccatactcc cattcgcggc aagaaacctc gctggcgcac
     2101 cccttgctgc aaggagcgca aggtgtttca cgccaagtga attgaatatc ccggttgttg
     2161 acacggatgg tgggagaaac gtcgaagccc aacgcggcgg cttgttgcgc gctctgcaca
     2221 tgaatcttgc gcacctctac tgcaaagccg ctcgcttcca aagtttgggt aatgatgggc
     2281 agggcagact cgagttgttc gttggtgccc tgacatcggt cgcattcgct tagatccaaa
     2341 taaaggaagt cgatggcgac ccggtctttt ggttgttccg cgatcggttg tgaaatcgtc
     2401 ccgcaacagc ttggctgttc cttctttagt gcatggctgg atgcatccat aactcctcct
     2461 tatt
//
LOCUS       DATIRS010001152         1584 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1463316, whole genome shotgun sequence.
ACCESSION   DATIRS010001152 DATIRS010000000
VERSION     DATIRS010001152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1463316"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1584)
                     /locus_tag="VLM90_14745"
     CDS             complement(<1..>1584)
                     /locus_tag="VLM90_14745"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HSQ14285.1"
                     /translation="GMLHGKILRSPYPHARIMRIDVSKAAKVPGVMAVLTRDDILHDE
                     GIEPFYGPVFKDQTIVATEKVRHVGDPVAAVAALTIDAAEAALKLIEVDYEELPAVLN
                     IDDALKSGAMLVHDSVKLPTSGFADLAEIKPIEGTNLCTHFRHNRGDIDKGFAEADQV
                     FEDTFTFPATQHSFLETHACIASVEPGGRITVWATTQNPFVVRPQLANILKFPVAKVR
                     VIVPYLGGGYGGKVYPKVEPITGALSQKAGRPVRLVLSREEVFYTITKHAAVIRMKTG
                     VKKDGTLIARECEIHLDTGAYAEIGPRVAKKYGYTAAGPYKIPNLKIDSYSVYTNKPP
                     AGAFRGFGVSQSAWAVESQMDIIAAALEIDPVELRKHNGYNEGDKFVTEETLRAVGLK
                     ECIDEVAKSIGWEKRERDFNDRSRGVLPYAHPVQEPALSPSKGSIPDNIRRGKGLACM
                     IKATITPSISSAVVKLNEDASLSIYAGTVEMGQGSETVLAQIAGKELGVPMPTIQVLG
                     VDTDVVPYDLTTSSSRSTF"
BASE COUNT          303 a          506 c          437 g          338 t
ORIGIN      
        1 gaaaagtcga gcggctcgac gacgtcgtca aatcgtacgg caccacatcg gtgtcgacgc
       61 cgagaacctg aatggtcggc atcggaacac ccagctcctt gccggcgatc tgcgccagca
      121 cggtttccga cccctgcccc atctcgacgg taccggcata tatagacagg ctcgcatcct
      181 cgttcagctt caccaccgcc gaggaaatcg acggcgtgat cgtcgccttg atcatgcacg
      241 cgagtccttt gccgcggcga atgttgtccg gaattgaacc cttcgacggg ctcagggcag
      301 gctcttgaac cggatgggcg tatggcaata cgcccctact tcgatcattg aaatctcttt
      361 ctcgcttctc ccaaccaatc gactttgcca cctcgtcgat acactctttc aaaccgaccg
      421 cgcgcagcgt ctcttcggta acgaacttgt cgccctcgtt gtagccgttg tgcttgcgca
      481 gctcgaccgg gtcgatctcg agcgccgcag cgatgatatc catctgcgac tccacggccc
      541 aagccgattg cgatacgcca aagccgcgga acgcgcccgc cggcggcttg ttggtgtaga
      601 ccgagtagga atcgattttc aagttgggaa tcttatacgg ccccgccgcc gtgtagccgt
      661 attttttcgc tacccgcggg ccgatctcgg cgtaggcgcc ggtgtcgagg tggatctcgc
      721 actcgcgcgc gattaacgtg ccgtcctttt tgacgccggt cttcatgcgg atcaccgccg
      781 catgtttggt gatcgtgtaa aaaacttctt cgcgggagag caccagccgc accggccggc
      841 cggctttctg cgacaacgcc ccggtaatcg gctcgacctt cgggtagacc ttgccgccgt
      901 agccgccgcc gagatacgga actatcaccc gcaccttcgc cacgggaaat tttaaaatat
      961 tggccagctg ggggcgcacg acgaacgggt tctgcgtcgt cgcccagacg gtgatccgtc
     1021 cgcctggctc taccgaggcg atgcaggcgt gggtttcgag aaaactatgc tgcgtcgccg
     1081 gaaatgtgaa agtgtcttcg aaaacctgat ccgcttcggc gaagccttta tcgatgtcac
     1141 cgcggttgtg tcggaagtgg gtgcacaggt tcgtcccttc gatcggtttg atctcggcca
     1201 gatcggcgaa accggaagtc ggcagcttga ccgaatcatg caccagcatc gcgcccgatt
     1261 tgagcgcgtc gtcgatgttg agcaccgccg gcagctcttc gtaatcgact tcgattagtt
     1321 tcaaagccgc ttcagcagcg tcgatcgtca acgccgccac cgccgccacc ggatcgccga
     1381 catggcgcac tttttccgtc gcgacgatgg tctggtcttt gaacaccgga ccatagaacg
     1441 gctcgatgcc ttcatcgtgc aagatgtcat cccgcgtcag caccgccatg acgcccggaa
     1501 ctttcgccgc cttcgataca tcgatacgca tgatccgcgc atgcggataa ggactgcgca
     1561 aaatcttgcc atgcaacatc cccg
//
LOCUS       DATIRS010001153         3882 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1856416, whole genome shotgun sequence.
ACCESSION   DATIRS010001153 DATIRS010000000
VERSION     DATIRS010001153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3882
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1856416"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..599)
                     /locus_tag="VLM90_14750"
     CDS             complement(<1..599)
                     /locus_tag="VLM90_14750"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSQ14286.1"
                     /translation="MIANNPISHLNRPPVLLVTGGDSGIGLGIARKFVEADYRVAIGG
                     LDRRKGSRVVATLRAQGGDAVYFLADVRSESQIRALIRRTVQRFGRIDVLCNNAGIEK
                     LAPIDKASAAQWDDVMAVNARAAFLSSKYGLPHLKWSKGTIINIASTAGLVGYAGGLA
                     YCASKAARVMMSKTTALEFAAYGIRVNCICPGATRTPLIP"
     gene            complement(673..1389)
                     /locus_tag="VLM90_14755"
     CDS             complement(673..1389)
                     /locus_tag="VLM90_14755"
                     /inference="COORDINATES: protein motif:HMM:NF025871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing redox enzyme family protein"
                     /protein_id="HSQ14287.1"
                     /translation="MISKEDVLQAVAESWWEAKPRIIEFVNHHLTKAGARIFTPEHTY
                     FAAHFPRWFGNVIANCPDIGPRSYMIGNIYVEEVDDPTIHDTHHGSMVTFGEGLGMTR
                     DEVLHHVPSIPMRMGIHYWDNMSRTRPWLEGFAAVGSLELSNHGALAARYGEVPLNAR
                     KKWQPLGLDAKYLVHWEAADAADPGEGGHADETVRILVQYAKTDDEGRRVLEVVRESI
                     SVFRFIYDNIAERAIAAGKK"
     gene            complement(1516..2973)
                     /locus_tag="VLM90_14760"
     CDS             complement(1516..2973)
                     /locus_tag="VLM90_14760"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ14288.1"
                     /translation="MNNQQRLQAALDLRSFIDEVRAAGELKEISGAHWNLEIGALTEI
                     FAEQTPTPALLFDAIPDYPKGRRVLSNLLYSPLRQALALAMAPELRGIPLVQAVKARL
                     AELKPLPPVEVAGAPVMQNIIAGDRVDVLKFPAPHWHEKDGGRYIGTFDAVISRDPDS
                     GYVNVGTYRVQAHDDKTVGLWIIPGKHGNLIGQKYWSKGRGCPFLIACGVAPSMLLAS
                     AVGIPWGVSEYDFLGGLLGAPVPIAIGKQTGLPMPANAELVLEGFAPPPEKVSRPEGP
                     FGEWPGYYASGTVDRPVVQVSTVYHRDHPIITGDPPFKTYLNTDIYMYIRSANIWSAM
                     ERGGIPDIRGVWFPRQGRFVVAVAIKQRYPGHARQAAHGVLATRDGGRDTRMIIVVDD
                     DIDITNLNEVLWAVASRWDPKRQSEIVEVPASDLNPTLTAQQRAAGEMVSSCQIIDAC
                     RPFARRDEFPQVSSASPEYKAKIMQQWAHLFGTKD"
     gene            complement(3122..3370)
                     /locus_tag="VLM90_14765"
     CDS             complement(3122..3370)
                     /locus_tag="VLM90_14765"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ14289.1"
                     /translation="MRDGRIYVGFDVDDDGLGFAVQKAGRDAVVFGSDFPHEVFNAEK
                     CRHEIDQLLARGDLDSADKAAVLGGNARRFYRLGAIGR"
     gene            complement(3652..>3882)
                     /locus_tag="VLM90_14770"
     CDS             complement(3652..>3882)
                     /locus_tag="VLM90_14770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14290.1"
                     /translation="IERLFDIMRHSLLKIGFLNTENPEHMLLAFRRIFGRAALEDRDV
                     RILTGMFRQIEWYANQGWKVVEEKEKPGIKIR"
BASE COUNT          790 a         1198 c         1100 g          794 t
ORIGIN      
        1 ggaatcaacg gcgtgcgcgt cgcgccgggg cagatgcagt tcactcgaat gccataggcc
       61 gcgaactcca gggcggtggt cttgctcatc atcacccgtg cggctttcga cgcgcagtag
      121 gccaagccgc cggcatagcc aaccagtccg gcggttgaag cgatgttgat aatcgtcccc
      181 ttgctccact tgagatgggg caagccatat ttgctgctga gaaatgccgc gcgcgcattg
      241 accgccatga catcgtccca ctgcgccgcc gacgccttgt cgatgggcgc cagtttctca
      301 atgccggcgt tgttgcacag gacatcgatg cggccaaagc gctgcacggt gcggcggatc
      361 agagcgcgga tttgcgactc gctacgcaca tcggcaagaa aatagaccgc gtcaccgccc
      421 tgggcccgca gcgtcgccac aacccggctc cctttgcgcc ggtccagacc gccgatcgcc
      481 acgcgataat ctgcttcgac gaacttgcgc gcgattccaa ggccgatgcc cgaatccccg
      541 ccggtcacta ggagcaccgg cggtctgttc agatgtgata tcgggttatt tgcgatcatg
      601 agcattgcca agtggtctcg cactcgtggc gaagaacggt caccccgagc atgtcgaagg
      661 gtgcggccac ccctacttct ttcctgccgc gatcgcccgc tcggcgatat tgtcataaat
      721 aaagcgaaac acgctgatgc tttcgcgcac cacttcgagc acgcgccggc cttcgtcatc
      781 ggtcttggca tactggacga gtatgcgcac ggtctcgtcg gcatggccgc cctctcctgg
      841 atcggcggca tccgccgctt cccaatggac gagatatttg gcatcgagcc ccagcggctg
      901 ccattttttg cgagcattga gcggaacctc gccgtagcgc gccgccagcg caccgtgatt
      961 ggaaagttcc agcgaaccca ccgcggcaaa gccttcgagc catggccggg tgcggctcat
     1021 gttgtcccag tagtgaatgc ccatgcgcat cggaatgctc ggcacatgat ggagcacctc
     1081 atcgcgcgtc atgcccaagc cttcgccgaa agtcaccatg ctgccatgat gggtgtcgtg
     1141 aatcgtcggg tcgtcgactt cctcgacata aatgttgccg atcatgtagg agcgcggccc
     1201 gatgtccggg cagttggcga tgacattacc gaaccagcgc ggaaaatgcg ccgcgaaata
     1261 ggtatgctcg ggcgtaaaga tccgcgcccc tgctttggta agatgatggt tgacgaactc
     1321 gataatcctc ggcttggctt cccaccatga ctcggcgacc gcttgtaaaa catcttcttt
     1381 gctaatcatt ttgattccct tcacctgatc ggcaactgac tcgcgtaaac accgaagaga
     1441 tttctcgcta cgctcgcaat gacaaatgga gaaacacttt ctgtcgtctc aagggtgtga
     1501 gagatccatt gagactcaat ctttcgtgcc aaacaaatgc gcccactgct gcataatctt
     1561 cgctttgtac tccggacttg cactgctcac ctggggaaac tcatctcttc gcgcaaatgg
     1621 ccggcaggca tcgatgatct ggcacgagct gaccatctcg cctgccgccc gctgctgcgc
     1681 cgtcagcgtg gggttcaaat cgctcgccgg cacttcgacg atctccgact gtcgtttggg
     1741 atcccagcgc gacgccaccg cccacaacac ttcgttcaaa ttggtgatgt cgatgtcatc
     1801 gtcgacgacg atgatcatgc gcgtgtcgcg tccgccgtcg cgggtcgcca gcacgccatg
     1861 ggccgcctgg cgcgcgtggc cgggatagcg ttgcttgatc gcgacggcga cgacgaagcg
     1921 gccctggcgc ggaaaccaca caccgcgaat atcggggatg ccgccgcgct ccatcgccga
     1981 ccagatgttc gccgaacgga tatacatgta gatatcggtg ttgagataag tcttgaacgg
     2041 cggatcgccg gtgatgatcg gatggtcgcg atgatagacc gtcgagactt gcaccaccgg
     2101 gcgatccacc gtaccggatg cgtagtagcc cggccactcg ccgaatggtc cctcaggacg
     2161 ggaaaccttc tccggcggag gggcgaaacc ttcgagaact aattcagcat tggccggcat
     2221 cggcaagccg gtctgtttgc cgatggcgat gggcaccggc gcgcccaaca ggccgccgag
     2281 aaaatcatac tcgctcacac cccagggaat gcccacggcg ctcgccaaca gcatcgacgg
     2341 cgccacaccg caggcgatca agaacggaca gccccgcccc ttgctccaat atttttgccc
     2401 gatcaaattg ccatgcttgc cgggaatgat ccacaagccg acggtcttgt cgtcatgcgc
     2461 ttgcacccgg taggtgccga cattgacata cccgctatcg ggatcgcggc tgatcacggc
     2521 atcgaaagtg ccgatatagc ggccgccgtc tttttcatgc cagtgcggcg cgggaaactt
     2581 gagaacgtcg acccgatcgc cggcgataat gttctgcatg accggcgcgc cggcgacttc
     2641 aaccggcggc agcggtttga gctcggccag ccgcgccttg accgcctgca ccaagggaat
     2701 gccgcgcagc tccggcgcca tggccaaagc gagagcctgg cgcagcggag agtacagcaa
     2761 gttactcaag acgcgccggc ccttgggata gtctggaatg gcgtcgaaca gcagcgccgg
     2821 cgtcggtgtc tgttcggcga agatctcggt caacgcgccg atttccagat tccaatgcgc
     2881 cccggagatc tcttttagct ctccggcggc gcgaacttcg tcaataaaac tccgcaggtc
     2941 gagtgccgct tgcaagcgct gttggttatt catcgtcgtg tttgttgctc cgctcttgtt
     3001 aagattgtgc tgcgcacgct agcgatactt actagcactc tcactgacgc ggcgcgcgca
     3061 aaatttcggg tgatctggaa tacccgaaga ggagattgac tcccgccaag acgccaacaa
     3121 actatctgcc aatggcgccc aaccgataaa accggcgcgc gttgccaccg agcaccgccg
     3181 ctttgtcggc gctgtcgaga tcaccgcgcg cgagcagctg gtcgatctca tgacggcatt
     3241 tctcggcgtt gaaaacctcg tggggaaagt cactgccaaa aacaaccgcg tcccgtccgg
     3301 ctttttgcac ggcgaagccc aaaccgtcgt cgtcgacgtc gaagccgaca tagatgcgcc
     3361 cgtcgcgcat ttgccggcgc agataatcgc tcgccttctt agaaaataca tgtaagggga
     3421 gggttccacc accggggttc cgtcataccc gcgaaagcgg gtatccaggc taattgggcg
     3481 cagaccaaac ttggattccc gcgtgcgcgg gaatgacgcg tcaagcggac cgcctatgga
     3541 gggaatccca tccattttca ttttctgtag acgagcgtaa gatcatgaaa cacttcgtgg
     3601 tgaagacaat ctttcgttca tcgactctgg catcattaca ctgcgctata attatctgat
     3661 cttaatcccc ggcttttctt tttcctcgac gactttccag ccttggttgg cgtaccactc
     3721 gatctggcgg aacatgccgg tcaagattct tacgtccctg tcttcgaggg cggcgcggcc
     3781 gaagatgcgt cggaaggcaa gcagcatatg ttcaggattc tccgtattca agaagcctat
     3841 cttaagcagc gagtggcgca tgatgtcgaa caggcgctcg at
//
LOCUS       DATIRS010001154         1839 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_873376, whole genome shotgun sequence.
ACCESSION   DATIRS010001154 DATIRS010000000
VERSION     DATIRS010001154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1839
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_873376"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            379..1806
                     /gene="glgA"
                     /locus_tag="VLM90_14775"
     CDS             379..1806
                     /gene="glgA"
                     /locus_tag="VLM90_14775"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: protein motif:HMM:NF001899.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004373 - glycogen (starch) synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase GlgA"
                     /protein_id="HSQ14291.1"
                     /translation="MIASEVSPFAKTGGLADVLGALSVALERFGHELCVIAPAYRAVL
                     QGDFILQETALNLSVPVADRHVMASVLRTSIGMGVDVYFIRADQYFDRESFYGTPAGD
                     YPDNAERFVFFSRAALELLRRQPVDIVHCHDWQAAPAIIYLKTQADRYPESAAAKTVF
                     TIHNLGFQGIFPPADWPLLNLDPAFFTPQFLEFYANINFLKGALILADKITTVSPSYA
                     LEIMTPEQGFGLEGVVRERAADVVGILNGVDYSQWNPWTDPLLTHHYGENSLSVKRQC
                     KTSLRNNVGLPDDFDTPLLAMISRLTAQKGIDLVESIFDRLMERDVQIVLLGSGEARF
                     EQFFRDAARRYPGRAAVRIGFDEPLAHRIEAGADYFLMPSLYEPCGLNQMYSLKYGTI
                     PIVRAVGGLKDSVQDYDPQAQTGTGFVVNTHDPQALLDAVDRALTVYGDKAVLTAMCR
                     RAMSMDFSWEGPARMYRNLYQQLST"
BASE COUNT          351 a          543 c          532 g          413 t
ORIGIN      
        1 ttgcggtttg caactttacg ccggtgccgc gccaaggcta tcgcatcggc gcaccgcgcg
       61 gcggtttctg gcgcgaagcg ttgaacagcg acagcttggc ctacggcggc agcggcgtgg
      121 gaacctcggc ggcgtcgaag cagcggcagc accgctgcaa ggccggccgt attccctgac
      181 cttgactcta ccgccgctcg cagtggtgtt cttcatcaac aatccgtgaa gcagcgcgag
      241 gggaattgga gtaatggagt gttggagaat tgggtttcga aagcatcact ccagtactcc
      301 aacactccaa tatgttactt tctctagagc ctgtgacatt ttttctgcat cctgttagag
      361 attgacgtga agatcgccat gatcgcatct gaagtcagcc ctttcgccaa aaccggcggg
      421 ttggccgacg tgctcggggc tctatcggtg gccctggaac ggttcggcca cgagctctgc
      481 gtcatcgcgc cggcttatcg agccgtgctc cagggcgact ttatcttgca ggaaaccgcc
      541 ttaaaccttt ccgtgccggt cgccgatcgg cacgtgatgg cgtcggtgtt gcgcacttcc
      601 atcggtatgg gcgtcgacgt atattttatt cgcgccgatc agtatttcga tcgtgaatct
      661 ttttacggca cccctgccgg ggattatccg gataacgccg agcgctttgt ttttttcagc
      721 cgcgcggcgt tggagttgct gcgccggcag ccggtggaca tcgtgcactg ccacgattgg
      781 caggccgcgc cggcaatcat ttatctcaag acccaggccg accgctaccc cgagagcgcc
      841 gctgcaaaaa ctgtctttac catccataat ctcggtttcc agggaatctt cccgcccgcc
      901 gactggccgc ttttgaatct cgatccggcg ttttttaccc cgcagttcct ggagttttac
      961 gccaacatca attttctcaa gggcgcgctg attttggccg ataagattac taccgtgagt
     1021 ccgtcttacg cgctggagat catgaccccc gaacagggct ttggcctcga gggcgtggtg
     1081 cgcgagcgcg ccgccgatgt cgtcggcatc ttgaacggtg tcgactacag ccagtggaat
     1141 ccctggaccg acccgctgtt aacgcatcac tatggtgaaa acagcttgag tgtgaaacgg
     1201 caatgcaaga ccagtctgcg gaacaatgtc ggcctccccg acgacttcga caccccgctg
     1261 ctcgcgatga tctcgcgtct gaccgcgcaa aaaggcatcg atctggtgga gagcattttc
     1321 gatcggctga tggagcgcga cgttcaaatc gtcctgctcg gcagcggcga ggcgcgcttc
     1381 gaacaattct ttcgcgacgc cgcgagacgt tacccaggcc gcgccgccgt gcgcatcggc
     1441 ttcgacgagc cgctggcgca tcggatcgaa gctggcgccg attactttct catgccgtcg
     1501 ctctacgaac cctgtggtct caatcaaatg tatagcctca aatatggtac aattccgatc
     1561 gtgcgcgcgg tcggcggcct gaaagattcg gtgcaggact acgatccgca ggcgcaaacc
     1621 ggcacgggtt tcgtcgttaa cacccatgac ccgcaagccc tgctcgacgc cgtcgatcgg
     1681 gccttgacgg tgtacggcga caaagcggtt ttgaccgcca tgtgccggcg cgccatgtcg
     1741 atggattttt cctgggaggg tccggcgcgg atgtatcgca acttgtatca gcaactatcg
     1801 acttaaaggg ggaaaccaaa gaggtcgatg atgtacgtt
//
LOCUS       DATIRS010001155         3036 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_676541, whole genome shotgun sequence.
ACCESSION   DATIRS010001155 DATIRS010000000
VERSION     DATIRS010001155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3036
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_676541"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(365..1474)
                     /locus_tag="VLM90_14780"
     CDS             complement(365..1474)
                     /locus_tag="VLM90_14780"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HSQ14292.1"
                     /translation="MEKHCFNIIIAGGKGTRFWPLSRAQRPKQLLKILSRKSLIDETA
                     ERVYGLGGRARTLVVTVAEQVTALKRELPALPKNNFIVEPLGKNTAPCIGLAALEVMR
                     RDPNGVMVVLPADHWVADVKGFQRTLKSAVALAKKRDQLVTIGIRPDYPETGYGYIMK
                     SGKLAAAGGAFQVKKFTEKPSEAAAKKLIRQGSLWNSGIFVWKASLLLDLLNRYQPAI
                     GAALSRIAKAAAGKSLASPITALRRAIAREYGRMPSISIDFAVLEKAGAEGNVITVEA
                     NFGWSDVGSWAAVHRMMDKDVHGNAGNGRWLQIGARKCLIHSPDRLVVLLGIDNAVVV
                     DTPDAILVGDLSRSQEVRDIVAELQRQGMGSYTVK"
     gene            1533..2492
                     /locus_tag="VLM90_14785"
     CDS             1533..2492
                     /locus_tag="VLM90_14785"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HSQ14293.1"
                     /translation="MNGNDENQIWLVPDDLQAVRLDGFVRQCLPHLSRQEVHRAIAEK
                     FFLLNGRVARKGDSLNGGDRLCFVGPADLLSDAPPPARQLEIPIIYEDDSLLVVDKPA
                     GVATHGFSGRDRATLANFLAAQRPGLLNIGKSRWEPGLVHRLDIETSGVVLVAKTQAV
                     FDRLREQFRRREIKKTYLALVWGQPIERGTIELALAHDRGDRRRMVAVQHRERSADRR
                     VWQAITRYRVIATASGMSLLEVEMETGVTHQIRVHLSSNGYPIVGDTLYGADYPERFG
                     LARHCLHASSLTLRHPASGQLLCVDAQLPVELREVLQRIEMAV"
     gene            complement(2489..2854)
                     /locus_tag="VLM90_14790"
     CDS             complement(2489..2854)
                     /locus_tag="VLM90_14790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14294.1"
                     /translation="MPRTKKKTAGRPAKAKDRSHDYIDDGTHDESDDEDLPSDEAGRR
                     KIKKNYEELLGIRIDKLRGRVLNREKINKSIDGLYFICFECKKISHNLDDGWMEEAVT
                     LNNFCGPCAKAKGIKTSAA"
BASE COUNT          587 a          823 c          909 g          717 t
ORIGIN      
        1 gtaccggtac tgctaagttg gcgtgctcaa tgaagaaatc caatctcacc acgaaggaca
       61 cgaagagcac gaagttcgga gtaataattt tccgaaccct tcgtgtcctt cgtgcctcct
      121 tagaaaatac atgtaagggg agggtctcca ccaccagggt tccgtcatac ccgcgaaagc
      181 gggtatccag tctaattggg cgcagaccaa acctggattc ccgcgtgccc gggaatgacg
      241 cgtcaagcag accgcctatg gagagaatcc cagccatttt catattctgt agacgagcgt
      301 aagctcatgg acacttcgtg gtgcaaacaa aatcttcata ttgggtaaat ctagacgcac
      361 gcagttattt gacagtatag ctgcccatgc cctggcgctg gagttcggcg acgatgtcac
      421 gtacttcctg ggagcggctg aggtcgccga ccaggatggc gtcgggggta tcgacgacga
      481 cggcattgtc gatgcccaac agcacgacta gccgatcggg agagtgaatc agacattttc
      541 gcgcgccgat ctgcaaccaa cggccgttgc cggcgttgcc gtgaacgtct ttgtccatca
      601 tgcgatgcac cgcggcccag ctgccgacat cgctccaacc gaagttggct tcgacggtga
      661 tgacattgcc ttcggcgccg gctttttcca aaaccgcaaa gtcgatggag atgctcggca
      721 tccggccata ctcgcgggcg atggctcgac gcaacgcggt gatgggacta gccagcgatt
      781 ttccggcggc ggctttggcg atgcggctaa gcgccgcgcc gattgccggc tgatagcgat
      841 tcaacagatc cagcagcagg gatgctttcc agacaaagat gccgctattc cacaacgagc
      901 cttggcgaat taattttttc gccgccgctt cgctaggctt ctcggtaaat ttcttgactt
      961 ggaacgcgcc gccggcagcg gcaagtttgc cgcttttcat gatgtagcca tagccggttt
     1021 ccgggtaatc tgggcggatg ccgatggtga ccagctggtc acgttttttc gccagtgcga
     1081 cagccgactt cagagtgcgt tggaagcctt tcacgtcggc tacccaatgg tcggcgggaa
     1141 gcacgaccat cacgccgttg ggatcgcggc gcattacttc caacgcggcc aaaccgatgc
     1201 aaggcgcggt gttttttcct agcggttcga caataaaatt gttcttgggc agggccggca
     1261 gttctctttt gagtgcggtg acttgctcgg cgacggtgac caccaaggtc cgcgcgcggc
     1321 cgccgaggcc gtagacgcgc tcggcggttt cgtcgatcaa gcttttgcgg ctcaagattt
     1381 ttaacaactg tttaggtcgt tgagcgcggc tcaggggcca gaagcgcgtg cctttgccgc
     1441 cggcgatgat gatgttgaag cagtgttttt ccatttgtct gcgagttgat gagtgcgccg
     1501 gttagtgtac ggtagccgtg atgggcgatc aagtgaatgg caatgatgaa aaccagattt
     1561 ggcttgtgcc cgatgatctg caagcggtcc ggttagacgg cttcgtacgc caatgcttgc
     1621 cgcatttgtc gcgccaggaa gttcatcgag ctatcgccga gaagtttttt ctactcaacg
     1681 gcagagtcgc gcgaaagggc gatagcctga atggcggcga tcggctttgc ttcgtcgggc
     1741 cggcggattt gctgtccgac gcgccgccgc cggcgcggca attggaaatc ccgataattt
     1801 acgaggacga ttcgctgctc gttgtcgaca agccggcggg tgtggcgacc catggctttt
     1861 ccggacgaga tcgcgccacc ctggcgaatt ttcttgccgc ccaacggccc ggactactaa
     1921 acatcggcaa gagccggtgg gagcctggac tcgtgcatcg gctcgacatc gagacttcag
     1981 gcgtagtgct cgtcgccaag actcaagccg tcttcgatcg gctgcgcgaa cagtttcgcc
     2041 gccgggagat caagaaaacc tatcttgccc tggtgtgggg gcaaccaatc gagcgcggca
     2101 ccatcgagct ggctttggcc catgatcgtg gcgaccggcg ccgcatggtt gcggtgcagc
     2161 atcgcgagcg gagcgccgac cgacgggtct ggcaggcgat cacgcgttat cgtgtcattg
     2221 ccactgccag cggcatgagc ttgctcgagg tcgaaatgga gaccggcgtg acgcaccaga
     2281 ttcgcgtgca cttgtcctcg aacggctatc cgatcgtcgg cgatacttta tatggtgcgg
     2341 actatccgga gcgtttcggc ttggcccgcc attgtttgca cgccagcagt ctgaccttgc
     2401 gccacccggc gagtggtcag cttctgtgtg tcgatgcgca gctaccggtt gagcttcgtg
     2461 aggttttaca gcgaatcgaa atggcggtct aggcggcgct ggttttgatg cctttggctt
     2521 tggcgcaggg gccgcagaag ttattgagcg tcaccgcttc ttccatccag ccgtcgtcga
     2581 ggttgtggct gattttcttg cattcgaaac agatgaaata cagaccatcg atgcttttat
     2641 tgatcttctc gcggttgagc acgcggccgc gcagcttgtc gatgcgaatg cccagcagtt
     2701 cttcgtagtt tttctttatc ttgcgccgtc cggcttcgtc acttggaaga tcttcatcat
     2761 cggactcgtc atgggtgccg tcgtcaatat agtcgtgcga ccgatcctta gctttggctg
     2821 gccgtcccgc ggttttcttc ttggttcgtg gcatttgttt tggcgctccg tatgataccg
     2881 accctggcgg ctgttgggtt tgctgtcggg aagcgaccct aattgataat gaacgcagcc
     2941 aaggttgtca atagtgaaat cggaaagtgt aactttaata gcatgcgcgc tcggtaacaa
     3001 gtttgcgcct ggcatgaatg gagtctagtt cgaagt
//
LOCUS       DATIRS010001156         2133 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1267433, whole genome shotgun sequence.
ACCESSION   DATIRS010001156 DATIRS010000000
VERSION     DATIRS010001156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2133
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1267433"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2133)
                     /locus_tag="VLM90_14795"
     CDS             complement(<1..>2133)
                     /locus_tag="VLM90_14795"
                     /inference="COORDINATES: protein motif:HMM:NF036484.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14295.1"
                     /translation="DGIRRLFASADLSRLRGYTPSTFSFNVEGGRCETCRGEGFEKVE
                     MQFLSDVYTSCPECHGSRFREEVLEVAYRGKSIRQVLDLTVSDAVEFFKESNDVKGAL
                     EPLRAVGLDYLRLGQPVTTLSGGESQRLKLAAHMARAKKAGTLFIFDEPTTGLHFHDI
                     DRLLWAFNELIEQGHSVVVIEHNLEVIKCADHIIDLGPEGGDKGGEIVATGTPAQIAA
                     VERSYTGVYLRPYLNKSASLFAPVLKNAVGARPDLPVDVDAHCIAIVGAKEHNLKNIS
                     VNIPRDRFIVFTGLSGSGKSTLAFDIVYAEGQRRYLDSLSAYARQFLEVMARPNVDYV
                     AGIPPTVAIEQRLSQGGRKSTVATVTEIYHYLRLLYAKIGKQHCVNCGRPIHSLTRSQ
                     ILDRISRSYRGKDVMVLSPLVRGRKGFHKEVIAGALKLGYRRARIDGKMVDLRAPELK
                     NGLERFKEHNIDIIIGKAKAGGREVETMVDQGLRLGNGVIHLISERGEQIFNRRLFCL
                     GCGIGYEPLDPRLFSFNSQQGACKDCAGMGFTYDFDPQLIFADPRRSVKDALSGISSG
                     SSVNGSEIERAMQRLLKEMADDYDIDIGKPFAKQTKPVQEEIVGGGKGRGAFIGLVPY
                     LKELAQAGEENSANQLDELMTEVACAACQGRRLNPRAQAVKVAGKTIWEVAGLCVDDA
                     RAYFAKLDLDHSDSATAARDRAVSEKVL"
BASE COUNT          419 a          618 c          661 g          435 t
ORIGIN      
        1 ttcagcactt tctccgacac ggcccggtcg cgggcggcgg tggcgctatc cgagtggtcg
       61 agatcgagct tggcaaaata ggcgcgggcg tcgtcgacgc agaggccggc tacttcccag
      121 atagttttgc cagcgacctt gactgcctgg gcgcgtggat tcaagcgccg gccttggcag
      181 gcggcgcaag ccacttcggt catcagctcg tcgagttgat tggcagaatt ttcctcgccg
      241 gcctgggcca gttcttttaa atagggcacc aagccgataa acgcgccgcg ccccttgccg
      301 ccgccgacaa tttcttcctg aactggtttg gtctgtttgg caaaaggttt gccgatgtcg
      361 atgtcatagt cgtcggccat ttccttcaac aagcgttgca tggcgcgctc gatctccgag
      421 ccgttgaccg acgagccgct gctgatgccg ctaagagcat ctttcaccga gcggcgcggg
      481 tcggcaaaaa tcaattgcgg atcgaagtcg taggtaaagc ccatgccagc gcagtccttg
      541 caggcgccct gctggctgtt gaaagaaaat agccgcggat cgaggggctc gtagccgatg
      601 ccgcagccga ggcaaaagag ccgccgattg aaaatctgct cgccgcgctc ggaaattaaa
      661 tggatgacgc cgttgcccaa gcgcaagcct tgatcgacca tagtttcgac ttcacggccg
      721 ccggctttgg ccttgccgat tataatatcg atgttgtgtt ctttgaaacg ctccaaacca
      781 ttcttcaatt caggcgcgcg caggtcgacc attttgccgt cgatgcgggc gcgccggtag
      841 ccgagtttga gcgcgccggc gatgacttcc ttgtgaaagc ctttgcggcc gcgcacgaga
      901 ggacttagca ccatgacatc cttgccgcgg taggagcgcg agatgcggtc gaggatctgg
      961 ctgcgcgtca gcgaatggat cggccggccg cagttgacgc aatgctgttt gccgatcttg
     1021 gcgtagagca ggcgcaggta atgataaatt tccgtgaccg tggcgacggt ggattttcgg
     1081 ccgccctggc tcaagcgctg ctcgatggcg acggtgggcg gaatgccggc gacatagtcg
     1141 acgttggggc gcgccatcac ttccaaaaac tgccgcgcgt aggcggacag gctgtccaaa
     1201 tagcggcgct ggccttcggc ataaacgatg tcgaaggcca gcgtcgactt tcccgaaccg
     1261 ctgaggccgg tgaagacgat gaagcggtcg cgcggaatgt tcacgctgat attttttaag
     1321 ttatgctctt tggcgccgac gatggcgatg caatgagcgt cgacatcgac gggcaagtca
     1381 ggcctcgccc cgacggcatt ttttaacacc ggcgcaaaca gcgacgccga tttatttaaa
     1441 taggggcgca gatagacgcc ggtgtaggag cgctccaccg cggcgatctg tgcaggagtt
     1501 ccggtcgcga cgatctcgcc gcctttgtcg ccgccctcgg gaccgagatc gatgatgtgg
     1561 tcggcgcatt tgatgacttc caagttatgc tcgatgacga ccaccgagtg gccctgctcg
     1621 atcagttcgt tgaacgccca gagcagccgg tcgatgtcgt ggaagtgcag cccggtggtg
     1681 ggctcgtcga agataaacag cgtgccggct ttcttcgccc gcgccatatg agcggcgagc
     1741 ttcaagcgct gcgactcgcc gccggacagc gtcgtcaccg gctgtcccag gcgcagatag
     1801 tctaacccga cggcgcgcag cggttcgaga gctcccttca catcgttgct ctctttgaaa
     1861 aactccacgg cgtcgctgac ggtgagatcg agcacctggc gaatgctctt gccgcgatag
     1921 gcgacttcga ggacttcttc gcggaagcgg ctgccatgac actccgggca ggaagtgtaa
     1981 acgtcggaga gaaactgcat ctcgactttt tcaaaaccct cgccgcggca agtttcacag
     2041 cggccgcctt cgacgttgaa agaaaaagtc gacggcgtat aaccgcgcag gcgcgacaaa
     2101 tcggcgctgg cgaacagccg gcgaatgccg tcg
//
LOCUS       DATIRS010001157         4199 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1759436, whole genome shotgun sequence.
ACCESSION   DATIRS010001157 DATIRS010000000
VERSION     DATIRS010001157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4199)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4199
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1759436"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..445
                     /locus_tag="VLM90_14800"
     CDS             <1..445
                     /locus_tag="VLM90_14800"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HSQ14296.1"
                     /translation="IADSGGAGKFRGGLGFVREYEVLDNDARFSLRSTKHDIAPKGID
                     GGADGKTGHCVLNPGEINERVIPSRFSDHVLHPGEVFCLDTPGGGGLGNPVERDPERV
                     LNDVRNGYVTQQRAREVYRVAIDSADSDFIVNQTATAQLRAQARN"
     gene            547..2283
                     /locus_tag="VLM90_14805"
     CDS             547..2283
                     /locus_tag="VLM90_14805"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HSQ14297.1"
                     /translation="MSVDPRTLQVIQARLAGIVQEMQNGLFRTGYSTIIRESQDASCA
                     VLNTRGEVIAQHVVLPLHMGAFPACAAAILRTFSLDEINDGDAFITNHPYLGGSPHAP
                     DMGVFTPIYFRGEWVGFAANMAHKSDIGGTVPGSGSGTAREIYQEGLHLPPVKFMARL
                     QPVKEIDAVIAANSRTPALVLGDLRGQVGAARLGERRVNELMERYGKAIILESTELLS
                     AHTENRVRRAVAAWPDGESAGESFVDHDGIDLTKPIRIHVKVKKTGDRLHFDFSESSD
                     QTQGPANIRPPLVRAACAYCLVALVDRFLPINHGLARCVDATFRAGSVVDPRFPAAVN
                     TYMPTALSATEAILRALAHFVPDKRIAGGSGSAALVLGGRDAHSQRAYVHYEIFSGGT
                     GARAGKDGVSATAFHLSNCKTAPIEIIESEFPTRVERFEMLADSGGTGEWRGGLGFVR
                     EYRILADEVRFSMRTDKHAVEPFGSSAGLPGAKGACRINPSTKDEKALPSRFGDHRLR
                     RNDTIRVERPGGGGLGNPLDRPVEKVLEDLRQGYVSVARAQSDYGVVAQIVDGEPALH
                     EGETRHLRGKIA"
     gene            2356..2643
                     /locus_tag="VLM90_14810"
     CDS             2356..2643
                     /locus_tag="VLM90_14810"
                     /inference="COORDINATES: protein motif:HMM:NF014279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SWIB/MDM2 domain-containing protein"
                     /protein_id="HSQ14298.1"
                     /translation="MAAAKKKVAKKKRKPNAAFMKPVQPDAKLALVVGSKPIPRTEVT
                     KKLWAYIKKNGLQDKKKRTNINADDALKDVFGGKKTVTMFEMTKLVSKHVK"
     gene            complement(2847..3875)
                     /locus_tag="VLM90_14815"
     CDS             complement(2847..3875)
                     /locus_tag="VLM90_14815"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ14299.1"
                     /translation="MKRILILLLFSLIAISSVSAQTPFYQGKTVQIRVGFAAGGAFDV
                     WARVIANHLGRFVPGNPTFVVQNMTGGGSMVAANYIYSVAKPDGLTLGVVSPAMYIEQ
                     VTGKKEVQYDWFKFSFIGSPEKTYRIFYMRADLGIKTLEDMRTVAETPRCGSTGIGSA
                     AYYFPRLLQDTFGLKLTIVPGYPGAADVNLAIEKGEVHCFSGTLQAYFGSEPLRTWSK
                     TGFARVLVQGGAKRDPRMASVPTLWELMDKHKSNEIYRRLAKILLIPDDMGRPLFGPP
                     GMPADRLKALRDGFNKMIADPELLAEAKKKGLDATPLSGEELDALIKEAGVPSADTIQ
                     RLKPLMEN"
BASE COUNT          910 a         1334 c         1162 g          793 t
ORIGIN      
        1 catcgccgac tccggcggcg ccggcaagtt ccgcggcggt ttgggatttg tccgcgagta
       61 tgaagtgctc gacaacgacg cgcgcttttc cctgcgctcg actaaacacg acatcgcgcc
      121 caagggcatc gacggcggcg cagacggcaa gaccggccac tgcgtgttga atcccggcga
      181 aatcaatgaa cgcgtgatcc cgtcgcgctt ttccgaccat gtcctccacc cgggcgaagt
      241 tttttgcctc gacacccccg gcggcggcgg tttgggcaac cccgtggagc gcgatcccga
      301 gcgcgtcttg aacgacgtgc gcaacggcta cgtaacgcag caaagagcgc gcgaagttta
      361 tcgcgtcgcc atcgacagcg ccgacagcga tttcatcgtt aaccaaaccg cgacagcgca
      421 gctacgcgcg caggctagaa actagccgtt tcgggtttcg ctttccgagt ttcgcgttaa
      481 aagaccaagg atcgagtacg agcatcccaa cacgaaacta gaaacccgaa actcgaaact
      541 tttcttatgt ccgtagatcc gagaactctg caagtcatcc aagcgcgcct ggccggcatc
      601 gtccaggaga tgcagaatgg acttttccgc accggctact cgacgatcat ccgggaatcc
      661 caggacgcca gctgcgcggt gctcaacacc cgcggcgagg tgatcgccca gcatgtcgtc
      721 ttgccgctgc acatgggcgc ctttcccgcc tgcgccgcgg cgatcctgag aactttttcg
      781 cttgacgaaa tcaatgacgg cgacgccttc atcaccaacc atccgtactt gggcggcagc
      841 ccccacgccc ccgacatggg cgtgttcacg ccgatctatt ttcgcggcga atgggtcggc
      901 ttcgccgcca acatggcgca taagagcgac atcggcggca ccgtgcccgg cagcggcagc
      961 ggcacggcgc gggagattta ccaggaaggg ttgcacctgc caccggtaaa gttcatggcg
     1021 cggcttcaac cggtcaagga gatcgacgcc gtgatcgcgg ccaacagccg cacaccggcg
     1081 ctggtgttgg gcgacctgcg cggccaggtc ggcgcggcgc ggttgggcga gcggcgcgtc
     1141 aatgagctca tggagcgcta cggcaaagcg atcattttgg aatccaccga gctgctttcc
     1201 gcccacacgg agaaccgggt gcgccgggct gtcgccgcgt ggccggacgg cgaatccgcg
     1261 ggcgagagct tcgtcgatca cgacggcatc gacctgacta aaccgattcg cattcatgtc
     1321 aaagtaaaaa agaccggcga ccggctgcac ttcgacttca gcgaatcgag cgatcagacc
     1381 caaggaccgg caaacatccg cccgccactg gtgcgcgccg cctgcgccta ttgtctagtc
     1441 gccctggtgg accgcttcct gccgatcaat catggactag cccgctgcgt cgacgccacc
     1501 tttcgcgcag gcagcgtcgt cgatccgcgc tttcccgccg cggtgaatac ctatatgccg
     1561 acggcgctca gcgccaccga agcgatcctg cgcgccctgg cgcacttcgt ccccgacaaa
     1621 cgcatcgccg gcggctctgg cagcgcggcg ctggtcttgg gcgggcgcga cgcgcacagc
     1681 cagcgcgcct atgtccacta tgagattttc agcggcggca ccggcgcccg cgccggcaag
     1741 gacggtgtct cggcgacggc gtttcacttg agcaactgca agaccgcgcc catcgagatc
     1801 atcgagtccg agttccccac ccgggtcgag cgcttcgaga tgctcgcaga ctccggcggc
     1861 accggcgagt ggcgcggcgg tttgggcttt gtccgcgaat atcgaatact cgccgacgaa
     1921 gtgcgcttct cgatgcgcac cgacaagcat gccgtcgaac ccttcggcag ctccgccggc
     1981 ctacccggcg ctaaaggtgc ctgccggatc aatccatcga ccaaagatga aaaggcgctg
     2041 ccgtcccgct tcggcgacca ccggttaagg cgaaacgata ccatccgcgt cgaacgcccc
     2101 ggcggcggcg gcctgggaaa tcccctcgac cgccccgtcg aaaaagtcct cgaagacctg
     2161 cgccagggct atgtctcggt tgcccgcgcc cagtccgact acggcgtcgt cgcccagatc
     2221 gtcgatggcg agcccgctct ccacgaggga gaaacccgcc atttacgagg gaaaattgct
     2281 taattcgtta gtaataaccc agtgactctg ctataccttg acgaaataat ttatttcctg
     2341 aaggaggaaa aaaacatggc agcagcgaaa aagaaagtag cgaagaagaa aagaaaaccc
     2401 aacgcggcgt tcatgaagcc ggtacagccg gacgctaaac tcgccctggt cgtcggcagc
     2461 aaaccgatcc cgcgcaccga ggtcaccaag aaattgtggg cttacatcaa gaagaacggc
     2521 ctgcaggata aaaagaaacg cacgaacatc aacgccgacg atgcgttgaa ggacgtgttc
     2581 ggcggcaaga agaccgtcac catgttcgag atgaccaagc tggtcagcaa gcacgttaaa
     2641 taacttttac tcgctcgcga gtgacaaagg ccaagcacgc cgaggagccg gtgtttcttg
     2701 gcctttgtgt tttcgtcgga gcgtttgcgc gatcgcaata tttttacgcc gcatggaggg
     2761 ccggcgcacc ttgacgggcc tatctcgccg cggtttccag tgcacgctta attatttctg
     2821 cgaactcctg tccaaacgcc ggagagctag ttttccatca gcggcttcag ccgttgaatg
     2881 gtatccgccg acggcacgcc ggcttcttta atcagcgcgt cgagttcctc gccgctcagc
     2941 ggcgtagcat cgagaccctt tttcttcgcc tcggcgagca gctccgggtc ggcgatcatc
     3001 ttattgaaac cgtcacgcaa cgccttcaaa cgatcagccg gcatgcccgg cgggccgaac
     3061 agcggccggc ccatatcgtc gggaatgagc aggatcttcg ccagacggcg gtaaatctcg
     3121 ttggacttat gcttgtccat caactcccac agcgttggca cgctcgccat acgcggatcg
     3181 cgcttggccc cgccctgcac gagcacacga gcgaatccgg tctttgacca agtgcgcaac
     3241 ggctcgctac caaagtacgc ttgcagcgtg ccgctgaagc agtgcacctc gcccttttcg
     3301 atggcgagat tgacatcggc agctccagga taacccggca cgatggtgag cttgagccca
     3361 aacgtatctt gcaacaaacg cgggaaataa taggccgcac tgccgatgcc ggtggaaccg
     3421 caccgcggcg tttccgccac tgtgcgcatg tcctcaaggg ttttgattcc caaatcggcg
     3481 cgcatgtaga aaatccgata ggtcttctcc ggcgagccga taaaactaaa cttgaaccag
     3541 tcgtactgca cttccttctt gccggtcacc tgctcgatat acatcgccgg gctgaccacc
     3601 ccgagggtca agccatcggg cttggccacg ctataaatat aattcgccgc aaccatcgac
     3661 ccgccgccgg tcatattctg cacgacaaac gtcggattcc ccggtacgaa ccgccccaga
     3721 tgattcgcga tcacccgcgc ccaaacatcg aacgccccgc ccgcggcgaa gccgacacgg
     3781 atctgcacgg tcttgccttg gtagaaaggc gtctgggcag agactgacga aatcgcaatt
     3841 aagctaaaca gtaaaagtat caaaattctt ttcacgaaaa tctcctctga agtttattag
     3901 ataaacaagt gatcgatctt tactatgtcc cgtccgagtt gccaaatcac ttattaacag
     3961 actcttggta tcactttccc gaataatgag acccttgggc agagtcgagc aagtgagtca
     4021 tcctttgcca cggctaatcc atatatcatt ccctatcaca ggcaacataa cgtcctttcg
     4081 aaccgcaaaa gaggaccctc ggccacttgc tgccggggat gaggcgatcc ggcagatttt
     4141 ctccccattc cttgtagcgg cgctgcccta agtatatact ttgaagtgca tactttatt
//
LOCUS       DATIRS010001158         2106 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1071078, whole genome shotgun sequence.
ACCESSION   DATIRS010001158 DATIRS010000000
VERSION     DATIRS010001158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2106
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1071078"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..274)
                     /locus_tag="VLM90_14820"
     CDS             complement(<1..274)
                     /locus_tag="VLM90_14820"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HSQ14300.1"
                     /translation="MGNKVIDPVTLEVIWNRFLSVANEQQDALIRTAFSTIVRESQDL
                     ACGMFDTKGRMISQSISGTPGHINAMATSMKHFLAAFPPDKLAPGDV"
     gene            complement(264..>2106)
                     /locus_tag="VLM90_14825"
     CDS             complement(264..>2106)
                     /locus_tag="VLM90_14825"
                     /inference="COORDINATES: protein motif:HMM:NF014071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HSQ14301.1"
                     /translation="TALLTTAGFRDAVEIGREHRYELYDLNLDLPKPLVPRHLRFDVP
                     ERMAADGSILQELDEAFVRKLVGELRDKGIKAIGVCYLNSFRNPAHEKRTAEIIAEDA
                     PQIRVSLSCEVVAEIREFQRTSTTLANVYVQERVSDYLAHLQARLDKIGFRGSFFVML
                     SSGGIATRETASRFPVRLLESGPAAGALAAAEAGMGSGHRDLLSFDMGGTTAKLCVIE
                     NGQPLKTHEFEVDRVYRFRKGSGLPVRIPVIDMIEIGAGGGSIARVDSLGLLKFGPDS
                     SGADPGPVCYGQGGTQPTVTDADLVLGYLDANYFLGGKMQLDLDGTKKALERLGKPLK
                     MTAQQVAWGIHQIVNENMANAARAHLGERGKDPRRMPMYAFGGAGPVHGYRVAEILRL
                     PALISPFGAGVGSTFGLLSAPLAFDFVRSAYSRMDRLDWNLANRLLDEMAHEGRKVLQ
                     TSGLSSAEIRYQRTADLRYIGQGHEVSVALPDGVLGVGDLPRIAAEFERTYESLYGRK
                     GPDVPLEVINWRVVASGSPPDMNLKLPRVSTHGGDARKGSRLAFFPETNGYVETSIYD
                     RYTLEPGMRFNGPAIVEERESTLIVGAGGQARVDERLNVVVELGDGK"
BASE COUNT          428 a          665 c          624 g          389 t
ORIGIN      
        1 aaacatcgcc cggcgccagc ttgtccggcg gaaacgctgc aagaaaatgc ttcatcgacg
       61 tcgccatggc gttgatatgg ccgggcgtgc cgctgatcga ctgcgagatc atccgtccct
      121 tggtgtcgaa catgccgcaa gccaagtcct ggctttcgcg cacgatggtg ctgaaggcgg
      181 tgcggatcag cgcgtcctgc tgctcgttgg ccaccgacaa gaagcggttc caaatcactt
      241 caagggtaac cggatcgatg actttatttc ccatcgccta actccacaac tacgttcagc
      301 cgctcgtcca cccgcgcttg tcctcctgcg ccgacgatca aagtcgactc gcgctcttcg
      361 acgatggccg gtccgttgaa ccgcatgccc ggctcgaggg tgtagcgatc gtagatcgag
      421 gtttcaacat aaccgttggt ttcgggaaaa aacgccaaac gcgaaccttt gcgcgcgtcg
      481 ccgccatgag ttgaaacacg cggcagtttt agattcatgt ccggcggcga cccgctcgcc
      541 accacccgcc agttgatcac ttccagaggc acatccggcc ctttgcggcc atagagcgat
      601 tcgtaagtgc gctcgaactc ggcggcgatg cgcggcagat cgccgacgcc aagcacgccg
      661 tcgggcaacg ccactgaaac ttcatgacct tgaccgatgt aacgcaagtc ggcggtgcgc
      721 tggtaacgaa tctcggcgct gctcagtccg gaagtttgca acaccttacg cccttcatga
      781 gccatttcat cgagcaggcg attagcaaga ttccagtcga gccgatccat ccggctgtag
      841 gcgctgcgga cgaaatcgaa ggccagcggt gcgctgagta aaccgaaagt cgaaccgacg
      901 ccggcgccga acggcgaaat caaagccggc aggcgtaaga tctccgcgac tcggtagcca
      961 tgcaccggcc cggcgccgcc gaaggcatac atcggcatgc gccgcgggtc cttgccacgc
     1021 tcgccgaggt gggcgcgcgc ggcattggcc atgttctcgt tgacgatctg atgaatgccc
     1081 caggcgacct gctgggccgt catttttaat ggcttgccca agcgctccaa ggctttcttg
     1141 gtaccgtcca gatcgagctg catcttgccg ccgagaaaat aattggcgtc gagataaccg
     1201 agcacgagat cggcgtcggt gaccgtcggc tgcgtgccac cctggccgta acataccggg
     1261 ccgggatcgg cgccagagct atccggcccg aatttgagta ggcctaggga atccacccga
     1321 gcgatgctgc cgccgccggc gccgatctcg atcatatcga tgaccggaat gcgcaccggc
     1381 aaaccgctgc ccttgcgaaa tctatacacg cggtcaactt cgaattcgtg ggtcttgagc
     1441 ggctggccgt tctcgatgac gcaaagcttg gcggtggtcc cgcccatgtc gaaggaaagc
     1501 aggtcgcgat ggccggagcc catgcccgcc tcggccgcgg cgagggcgcc agcggcaggg
     1561 ccggattcga gcaggcgcac ggggaagcgc gacgccgttt cgcgcgtggc gatgccgccg
     1621 ctcgacaaca tgacgaagaa gctgccgcga aaaccgatct tatccaagcg cgcttgcagg
     1681 tgggcaagat aatccgacac gcgctcttgg acgtaaacat ttgccagcgt ggtgctggtg
     1741 cgctggaact cgcgaatctc ggcgaccacc tcgcagctca acgacacgcg aatctgcggc
     1801 gcgtcctcgg cgatgatttc cgccgtgcgc ttttcgtggg ctggattacg aaaactattg
     1861 agatagcaaa caccgatcgc cttgatgccc ttatcgcgca actcgccgac aagcttgcgc
     1921 acaaacgctt cgtccaactc ttgcaatata ctgccgtcag cggccatgcg ctcgggcacg
     1981 tcgaagcgca gatggcgcgg caccaaaggc ttgggcagat cgagattgag atcgtacagc
     2041 tcgtagcggt gctcgcgacc aatttccacc gcgtcgcgaa acccagccgt tgtcagcaat
     2101 gccgtc
//
LOCUS       DATIRS010001159         1545 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_382416, whole genome shotgun sequence.
ACCESSION   DATIRS010001159 DATIRS010000000
VERSION     DATIRS010001159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1545
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_382416"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            165..668
                     /locus_tag="VLM90_14830"
     CDS             165..668
                     /locus_tag="VLM90_14830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14302.1"
                     /translation="MAQTAVERGKYLVTVGGCHDCDTPKIEGPGGKPVLDEKVLLSGH
                     PEKAPYPNWMPDDMKQRNAMALTNPMLTAWAGPWGVSFAANLTPDKETGIAEWSEANF
                     IQALRTGKHQGQPNGRDILPPMPWENTKAMTDDDLKAIYAYLRTIPAVKNQVPLPVVP
                     GAVPAKP"
     gene            716..901
                     /locus_tag="VLM90_14835"
     CDS             716..901
                     /locus_tag="VLM90_14835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14303.1"
                     /translation="MDKLIEANLTAVLQREGLEPQAGDLEQFSEIIELYVENLRQLHS
                     VNLGSEELGPVFRPEWK"
     gene            1035..>1545
                     /locus_tag="VLM90_14840"
     CDS             1035..>1545
                     /locus_tag="VLM90_14840"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HSQ14304.1"
                     /translation="MAVAEKPLYYLTIHEAQQLIHERKLSPVELTQAVLDRIAAVDGK
                     LHAYINLMSDGAMTAARAAEAEIAKGNWRGPMHGIPFAVKDQLDAEGAPARVRQFTQG
                     VGDATPVRKLREAGAVLMGKLHMSSMPGAALPLPRNPWNTEHITGGSSTGSGAAVAGG
                     LCLGSLGEDT"
BASE COUNT          337 a          414 c          502 g          292 t
ORIGIN      
        1 ttcctgtgcg cttcgaggct gtcctgagcc gcaacgaagg gacatgggca ttaacggccc
       61 cgaacgtatt cttgaactca gaggttattt cgatgcgtta cagtgtggca ttactgcttt
      121 gtgcggtggg gttcttatca gtcgcgtgcg cggaaaaaaa gcccgtggca cagacagcag
      181 tggaacgggg caaatacttg gtgacggtcg gcggttgtca tgactgcgac acgccaaaaa
      241 ttgaggggcc aggcggcaaa ccggtccttg atgaaaaagt cttgttgtcc ggccatccgg
      301 agaaggcgcc atacccgaat tggatgccgg atgatatgaa acagcgcaat gccatggctt
      361 tgaccaatcc gatgttgacc gcttgggccg gaccctgggg tgtcagcttc gccgccaatc
      421 taaccccgga taaggagacc ggtatcgccg agtggagcga ggcgaatttc attcaagcct
      481 tgcggaccgg gaaacatcaa ggccagccca acggacggga tattctgccg ccgatgccct
      541 gggaaaacac caaagcgatg accgacgacg atctgaaagc gatctacgcc tatttgcgca
      601 cgattccggc ggtgaaaaac caagtgccgc tgccggtcgt gccgggcgcg gtgccggcca
      661 aaccttgaat ggggccgtga ttattgcgct catagcgcta aggaaggagt gagtcatgga
      721 taaactgatc gaagcgaatt taacggcggt gcttcagcgc gaaggtttgg agccgcaggc
      781 cggcgatttg gagcagttca gcgagatcat cgagctctat gtggaaaatc tgcgccagtt
      841 gcattcggtg aacttggggt cggaggagtt gggaccggtg tttcgtcctg aatggaagtg
      901 acgcgacaag aagatatccc tcgctatgct cgcgatgaca gcaagacagc ataactggcg
      961 catctgtcat ttcgagcgca gcgagaaatc tcgtcgtagc ttcgcaataa ggcattagag
     1021 aagggagact cgtcatggct gtcgctgaaa agccgcttta ttatttgacg attcatgaag
     1081 cgcagcagct gattcacgag cgcaagctgt cgccggtgga gctgacccag gcggtgctcg
     1141 atcgcatcgc cgcggtggac ggcaagctgc acgcctacat caacctgatg tccgatggcg
     1201 ccatgactgc ggcgcgtgcg gcggaagcgg aaatcgccaa gggcaattgg cgcgggccga
     1261 tgcatggcat tcccttcgcg gtaaaagacc agctcgacgc cgagggcgcg ccggcgcgtg
     1321 tgcggcaatt cacccagggc gtgggcgacg ccacgccggt gcgcaagctg cgcgaggccg
     1381 gcgccgtctt gatgggcaag ctgcatatga gcagcatgcc gggcgcggcg ctgccgctgc
     1441 cgcgcaaccc ctggaatacc gagcatatca ccggcggatc gagcacgggc tccggcgcag
     1501 cggtggccgg cggtttgtgc ttaggttccc tcggcgaaga caccg
//
LOCUS       DATIRS010001160         2046 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1661045, whole genome shotgun sequence.
ACCESSION   DATIRS010001160 DATIRS010000000
VERSION     DATIRS010001160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2046
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1661045"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..1049)
                     /locus_tag="VLM90_14845"
     CDS             complement(72..1049)
                     /locus_tag="VLM90_14845"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSQ14305.1"
                     /translation="MKREAYKSLRAISHQEPIGPGGPLCAGCGGQLSLRLFHKALGEN
                     VIFVNAASCSTMLATYPFTPLNSSWIYLAMACAPAGAQGVRDGLDILKAKGKLAGQPD
                     RKVVVLTGDGAAQEIGLQSTLAAIHRGLDFYYLCYDNESYGNTGFQSSPSTPYGARTS
                     TEPISPAAPHGRLHERRDLFEIWRVQKPDYLATISAAYPLDLSEKVYRAGKFTGAKLF
                     IALSPCPPGWDVDPEWSIDIARIAVESGIWPLREAVRGEVSHTYRPRKFAPVENYLER
                     QGRFRHLFEPRRDNETIAHIQATVNMYWNVAQENKPSADGNPASQTDPM"
     gene            complement(1321..>2046)
                     /locus_tag="VLM90_14850"
     CDS             complement(1321..>2046)
                     /locus_tag="VLM90_14850"
                     /inference="COORDINATES: protein motif:HMM:NF028456.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14306.1"
                     /translation="RESVELPEAGEVNEFLPSFLPAYPVLSNAQPAVLGAAVLDGSLY
                     SYFKHQMHHASDNALGLYRSIAGEFAARFGRRHDIVEAFMLDDADYVFVMTNSFASMA
                     KAEIKRLRNSGKKVGLARLRMIRPFPHAELQTILAGRKGVAVIDQNISVGKGGILFSE
                     IASALYGLKDRPPVLRSFIGGLGGRRFRPGEFDGMLDKLVAADESPAEMAEPHLLFTG
                     EECREVGRFFDIASKEPPQEEPL"
BASE COUNT          403 a          578 c          635 g          430 t
ORIGIN      
        1 ggtcgtcggc gaattcgaaa acgtctgtca tgttctcctc ccggaggaag ggcagacaca
       61 taggtctgcc cctacatcgg atcggtctgc gatgctggat tgccgtccgc cgatggtttg
      121 ttttcctgag ccacgttcca atacatattt accgttgctt gaatatgggc gatggtttcg
      181 ttgtcgcgtc ggggttcaaa cagatggcga aagcggccct ggcgctctaa ataattttcc
      241 acgggcgcaa acttgcgtgg tctatacgtg tgcgacactt cgccgcggac cgcctctctg
      301 agcggccaga taccgctctc caccgcgatt cgcgcgatat cgatggacca ctcgggatcg
      361 acatcccacc ccggcgggca gggcgacagg gcgatgaaga gtttcgctcc ggtgaatttc
      421 ccggcgcgat agactttttc cgatagatcc aatggatatg ctgcggagat ggtcgcgaga
      481 taatccggct tctgcacgcg ccagatctca aacaggtcgc ggcgttcgtg caaccggccg
      541 tggggcgcgg ccgggctaat cggttcggtc gatgtgcgcg cgccgtaggg cgtgctcggc
      601 gagctttgaa aaccggtgtt gccgtaggat tcgttgtcat agcacagata ataaaaatcc
      661 aagccgcgat gaatcgccgc cagggtcgac tgcaaaccga tttcttgggc cgcgccatcg
      721 ccggtgagca cgaccacctt gcgatccggt tgcccggcca gtttcccttt ggctttgaga
      781 atgtcgagcc catcgcgcac gccctgggcg cccgccggag cgcatgccat cgccagataa
      841 atccacgacg aattgagcgg cgtgaacgga taggtcgcga gcatggtgga gcagctcgcg
      901 gcgttgacga aaatgacatt ttcgccgagc gctttgtgaa acaaacgcaa gctcagctgg
      961 ccgccgcagc cggcgcacag cggtccgccg gggccgatcg gctcttggtg tgagatcgcg
     1021 cgcaggcttt tgtaggcttc acgcttcatg ggtcaccatt cgcgtttccc ggaatcggaa
     1081 agttggccgc aaagaacgca aaataacatc tgcgaggaag ttcggatgta ggggcgtatg
     1141 gcatacgccc tggggtggcg gcgcggcgat tgcgtggcaa caaaatttgc gccgtcgacg
     1201 caaactctaa tggatagcga tctacagtac gcaaagtaga aaccgagaga taattgtttt
     1261 cgtaacgttc ccccatggcg tcctcagttc agcctgacga gcgggtttga aacccgtccc
     1321 ctacaggggt tcctcctgtg gtggttcttt gctggcgatg tcgaagaagc gacccacttc
     1381 gcggcattct tcgccggtga agagcagatg tggctcagcc atttctgccg gcgattcatc
     1441 ggctgcgacc agcttatcca acatgccgtc gaattcgccg ggccggaatc tgcgaccgcc
     1501 gaggccgccg atgaacgagc gcagcacggg tggacgatct tttagcccgt aaagcgcgct
     1561 ggcgatctcg ctaaacaaga tgccaccttt gccgacggaa atgttttgat cgatgacggc
     1621 aacgcctttg cggccggcca gtattgtttg caactcggcg tggggaaagg gccggatcat
     1681 gcgcaggcgc gccaagccga ctttcttgcc gctgttgcgc aagcgtttga tctccgcctt
     1741 ggccatggag gcgaacgagt tggtcatgac gaatacatag tcggcgtcat cgagcatgaa
     1801 tgcttcgacg atgtcatggc gccggccgaa cctggcggcg aactcgccgg cgatgctgcg
     1861 ataaagtccc agcgcattgt cgctggcatg gtgcatctgg tgtttgaagt agctgtacag
     1921 gctgccgtcg agcaccgcgg cgcccaggac ggcgggttgg gcgttggata gaaccggata
     1981 ggccggcaag aagctgggca ggaattcgtt cacttcaccg gcttccggca gctccaccga
     2041 ttcgcg
//
LOCUS       DATIRS010001161         2318 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1365881, whole genome shotgun sequence.
ACCESSION   DATIRS010001161 DATIRS010000000
VERSION     DATIRS010001161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2318
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1365881"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..196)
                     /locus_tag="VLM90_14855"
     CDS             complement(<1..196)
                     /locus_tag="VLM90_14855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14307.1"
                     /translation="MANKPKITFATNPNPRNRALIDGLIPLDGYDFEYVGDKYTPGEM
                     HYRFVQGEFDLAEMSTATLMR"
     gene            complement(300..1007)
                     /locus_tag="VLM90_14860"
     CDS             complement(300..1007)
                     /locus_tag="VLM90_14860"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HSQ14308.1"
                     /translation="MKTIREQINVDGSAMNLFSAQPDGNGPLPAVVVIQHQYGVDKFM
                     EEMTERFARDGYFAVCPDLYHRDGPDCTDDGPTRRGRARDTNIINDINATMAHLRGNK
                     LVDGKRVAILGFCMGGRVAYLMAAASKDFKAAITWYGGSCFRQWGDGPTPFERTAQIS
                     CPIQGHFGATDQNPTLDDMAKLDAELTKHGKPHDFYVYPDTGHSFLDPHHPDRYVEKS
                     DRESWARGLEFLRTHLS"
     gene            complement(1155..>2318)
                     /locus_tag="VLM90_14865"
     CDS             complement(1155..>2318)
                     /locus_tag="VLM90_14865"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSQ14309.1"
                     /translation="DELGIARPAWPDPADAKRAAQWLIDARNPCIYSAAAGRNPEAVA
                     AIVQLAELLALPLVDADRLDRLNFPTTHALYGTGPEVKDADVSLMLEALVPYISPNAA
                     PKPGSKTIWVDADPVMSNYKTMEFQADLWLPVSVAAAAQAIHDAATALLSKSDLSRIA
                     ERRERLAARKQEMIAQAERQGQEAGKRKPMHPRWVAYQLGKILEADTILLDDAISNSG
                     FVCDHHGRSQAGTYFASGGSSGGWGSGAAFGAKLAAPDRDVVLATGDGYFMFGTPMPA
                     LWSAAHYKAPFLALVFVNRSYTTGTNGLKRAYPNGVAVRTENYEGGIFDPPPDFAKLA
                     EAANCFGTTVSEPEQVGPALKLALEQVRKGTPALVAAYLPTLVEEMSIAQRSK"
BASE COUNT          441 a          734 c          658 g          485 t
ORIGIN      
        1 cgcgcatcaa tgtcgctgtc gacatctcgg cgagatcgaa ctcgccctgg acgaaacgat
       61 aatgcatctc gcccggcgtg tatttgtcgc cgacgtattc gaaatcataa ccgtccagcg
      121 gaatcagtcc gtcgatgagc gcgcgattgc gcggattcgg attcgtcgca aaagtgattt
      181 tcggtttgtt ggccatgttg ctatccttcc gaattgctaa attcccattc accacgaagg
      241 cacgaaggaa aggcttagtt tccgaacttc gtgcccttcg tgccttcgtg gtaaaattcc
      301 taactcaagt gtgtccgcaa aaactccagg ccgcgtgccc acgactcgcg atcggatttt
      361 tccacatacc ggtccggatg atgcgggtcc aagaacgagt ggccggtgtc tgggtaaacg
      421 tagaaatcat gcggcttgcc atgcttggtc agctcggcat cgagcttcgc catgtcgtcc
      481 agcgtcggat tctgatcggt agcgccaaag tggccttgga tcggacagga aatctgcgcc
      541 gtgcgttcga acggtgtcgg cccatcgccc cactggcgaa aacagctgcc gccataccag
      601 gtgatcgccg ctttaaaatc cttgctcgcc gctgccatca aataagcgac gcgcccgccc
      661 atgcagaaac cgagaatcgc cacacgcttg ccgtcaacca gcttgttgcc gcgcaagtgc
      721 gccatggtgg cgttgatgtc attgatgatg ttggtgtcgc gcgcccggcc gcgccgcgtc
      781 ggtccgtcat ccgtgcagtc cggcccatcg cggtgataga ggtccgggca cacggcgaag
      841 taaccgtcgc gcgcgaaccg ttcggtcatc tcctccatga acttgtccac gccatactga
      901 tgctggatca ccaccaccgc cggcagcggc ccgttgccat cgggctgggc cgaaaataaa
      961 ttcatcgcgc tgccgtcaac gttaatctgc tcgcgaatcg ttttcacagt tcacctcgat
     1021 tgtatccatc tctcgcttgt atccgtatcg ctaaccgatc ggcaaatcta tatgaatcga
     1081 catctgccga tttcttatct gcgaactttg cgttctttgc ggccaatctt gcggctgcga
     1141 atcctaccgc actatcactt actgcgctgc gcaatgctca tctcctcaac cagcgtcggc
     1201 aaatacgccg ccactagcgc cggcgtgccc ttgcgcacct gttcgagcgc cagcttgagc
     1261 gcgggaccga cttgctcggg ctcgctgact gtggtgccaa aacagttggc cgcctcggcg
     1321 agtttggcga aatccggcgg cgggtcgaaa atgccgcctt cgtaattttc cgtgcgcacc
     1381 gccacgccgt tgggataagc gcgcttgagc ccgttggtgc cggtcgtata agaccggttg
     1441 acgaagacta gggccaaaaa cggcgcctta taatgcgccg ccgaccacag cgccggcatc
     1501 ggcgtgccga acatgaaata gccgtcgccg gtggcaagca cgacgtcgcg atcgggcgcc
     1561 gctaatttgg cgccaaacgc cgcgccgctg ccccagccgc ccgacgagcc gccgctggcg
     1621 aaataggttc ccgcttgtga gcgtccgtga tgatcgcaga caaatccgga attgctgatc
     1681 gcgtcatcga gtagaatcgt gtcggcttcg aggatcttgc ccagctgata ggcgacccag
     1741 cgcggatgca ttggcttgcg ctttcccgct tcctggccct gccgttctgc ttgcgcgatc
     1801 atttcttgct tacgcgccgc caaacgctcg cgccgctcgg cgatgcggct caggtcgctc
     1861 ttcgacaaca gcgcggtggc cgcgtcgtga atcgcctgcg ccgccgccgc caccgacacc
     1921 ggcaaccaga gatcggcttg aaactccatc gtcttgtagt tggacatcac cggatcggca
     1981 tcgacccaaa tggttttgct gcccggttta ggcgcggcat tgggcgagat atagggcacc
     2041 aacgcttcga gcatgagcga tacatcggca tccttgacct caggcccggt gccgtaaagc
     2101 gcgtgggtgg tgggaaagtt caagcggtct aagcgatcag catcgaccag cggcagcgcg
     2161 agcaactcgg ccaactgaac gatcgccgcc accgcttcag gattgcgacc cgccgcggcc
     2221 gaatagatgc acggattgcg cgcgtcgatc agccattgcg ccgcccgttt ggcgtccgcc
     2281 ggatcgggcc aggctggccg cgcgataccc agttcatc
//
LOCUS       DATIRS010001162         4252 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1857382, whole genome shotgun sequence.
ACCESSION   DATIRS010001162 DATIRS010000000
VERSION     DATIRS010001162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4252
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1857382"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            49..657
                     /locus_tag="VLM90_14870"
     CDS             49..657
                     /locus_tag="VLM90_14870"
                     /inference="COORDINATES: protein motif:HMM:NF037014.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14310.1"
                     /translation="MAKRGEKLIGVRIDSGDLAAQAHAVREILDEAGLGEVKILGSGG
                     LDEFDLGEFSLAQVPFDSYGVGTKMGTSADAPWTDMSYKMVEYAGRPVQKLSTGKISW
                     PGMKQVFRRLDAVGNLASDVIGLRTDNIAGAEPLLRKVMDRGKALRLANLEESRSTLL
                     EEFKRLPEPVKAIRNPARYPVEFSPALQKLRAEVESNIANKN"
     gene            complement(936..1928)
                     /locus_tag="VLM90_14875"
     CDS             complement(936..1928)
                     /locus_tag="VLM90_14875"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: protein motif:HMM:NF006829.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HSQ14311.1"
                     /translation="MSRSERRSVILGTGSELPSKIVTNHDLEKMVDTSDEWITVRTGI
                     KERRVLEEGKGNADMAYEAAKRALDDAHVDAKDLDAIIMGTVSADYPFPSSACVLEDK
                     LGARNAFSFDVGAACAGFLNALAVGDLFVRSGKANKALVVGSDALSRMLNWKDRGTCI
                     LFGDAAGAVVLGASENGSGVLSTKLRTDGSYVKQLYVPAGGSLKPPCPETVRNNEHTI
                     TMNGKEVFKIAVRSMEEISRQALDEAGVSIDQVALVIPHQANKRIIVALAERLGVPMD
                     KVVVNVDKYGNTSAASIPVALDEARRAGRIQPGDIVLFNAFGAGFAWGAAVVKF"
     gene            complement(1925..3175)
                     /gene="fabF"
                     /locus_tag="VLM90_14880"
     CDS             complement(1925..3175)
                     /gene="fabF"
                     /locus_tag="VLM90_14880"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: protein motif:HMM:NF004970.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HSQ14312.1"
                     /translation="MNTTEARRVVVTGIGLVTPLGTGVEKNWHALMAGRSGIRKISRF
                     NADAFASRIAGEVPDFKAEDYIEAKEIKKMDLFIHYAMGASAQAMADSGLKIEGEFAE
                     NVGVIIGVGMNGLDTLEVTKEALMAGGPRKISPFFIPKVISNLAPGHVAIRYGAKGIN
                     FTPTSACASGTHAIGEAYHMIRRGLQDAVIAGGAEAAITPLGVGGFAAMKALSTRNDE
                     PERASRPFDKERDGFVIGEGSGILILEERDHAVQRGAKIYAEVIGYAANGDAHHMTAP
                     APNGEGAARCMRLALKDAGIAPSDVSYINAHGTSTEYNDANETTAIKTVFGEAAAKLA
                     VSSTKSMTGHLLGAAGAVEGVYSALALHHGMLPPTINYENPDPACDLDYVPNQARKAD
                     VKVVLSNSFGFGGTNACVIFGRCP"
     gene            complement(3253..>4252)
                     /locus_tag="VLM90_14885"
     CDS             complement(3253..>4252)
                     /locus_tag="VLM90_14885"
                     /inference="COORDINATES: protein motif:HMM:NF013046.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="histone deacetylase"
                     /protein_id="HSQ14313.1"
                     /translation="EYLKHQPGESHPERPERVKVLLDLASELDAAKFQLLPPQPAKRA
                     DIAATHGEEHIKLIEATARHNRYALDGDTITCRDSFAVSLLAVGGFIGLLDAVAAKDC
                     RNGFALVRPPGHHALRNRAMGFCLFNTMAIGAEYLRRTHGAKKILIMEWDVHHGNGTQ
                     DAFYADPSVLFISTHQYPFYPGSGAANEVGSGAGEGYTINIPLPAGCADAEYAQAFHD
                     IVVPAAEKFCPDWILVSAGFDPHRRDPLGGMGVSDEGFALMATRLLGLADRFADGKIA
                     FLLEGGYDLAGLRGSVAAVLAAMQSGAARAGDAARSRDSQIAPLIRHIQQLHERYR"
BASE COUNT          890 a         1260 c         1271 g          831 t
ORIGIN      
        1 ctacgatacc ctcgccggcg cgcgcaacgc cgccacagtc gccagagaat ggccaaacgc
       61 ggcgaaaaac tcatcggcgt gcgcatcgac agcggcgatc tggcggcaca ggcccacgcc
      121 gtgcgcgaga ttctcgatga agccgggctt ggcgaggtca aaatcctcgg cagcggcggc
      181 ttggacgaat ttgatcttgg cgaattttct cttgcccaag tgcccttcga cagctacggc
      241 gtcggcacca agatgggcac ttcggccgac gcaccgtgga ccgacatgtc ttataaaatg
      301 gtcgaatacg ccggccggcc ggtgcaaaaa ctcagcaccg gaaaaatttc ctggccggga
      361 atgaaacaag tatttcgccg cctcgacgcc gtgggcaatc tagcaagcga tgtcatcggc
      421 ctgcgcaccg acaatattgc cggtgccgaa ccgctgctta gaaaagtaat ggatcgagga
      481 aaagcgctgc gactggcgaa tctcgaagag agccgctcga cgttgttaga agaatttaag
      541 cggttgccgg agcccgtcaa agcaattcgt aatcccgcgc gctatccggt ggagttttcc
      601 cccgccttgc aaaagctgcg cgccgaagta gaaagcaaca tcgcaaacaa gaattgaacc
      661 caaaagccgc agttgaaaaa actcaatccg tctggcgagg ggcgagcccg gagcagtgaa
      721 gccacccaac tgtacagtcg caaagtcata tttcatccac agctcgaagc tctcggttaa
      781 ctgccgagct agccggacgc accatagccc aaagagtgct cagaggcaga ggcccattgg
      841 cttcactgcg gagggcttgc cccgcgcctt agggttaact atcaactgcg taatccgggt
      901 tgaatgtgag cgggaatgga acggcttgaa caagttcaga acttgaccac agctgcgccc
      961 caggcgaagc cggcgccaaa agcattgaac aggacaatgt cgccgggctg gatgcggccg
     1021 gcgcgtctgg cttcgtcgag ggcgaccggg atcgatgccg ccgacgtgtt gccgtatttg
     1081 tcgacattga ccacgacttt gtccattggc acgccgagcc gttcggccaa cgcgacgatg
     1141 atgcgtttgt tggcctggtg tggaatgact agagccacct gatcgatgct gacgccggct
     1201 tcgtcgaggg cttgccggct gatctcttcc atggaacgca cggcgatctt gaacacctct
     1261 ttgccgttca tggtgatcgt atgctcgttg ttgcgcaccg tctccggaca gggaggcttg
     1321 agcgagccgc cggcgggaac gtagagctgc ttcacgtagg aaccgtcggt gcgcagcttg
     1381 gtgctcaaga caccggaccc gttctcggac gcgcccagca ccaccgcgcc ggcggcgtcg
     1441 ccaaaaagta tgcaggtgcc gcgatccttc cagttgagca tgcggcttag ggcgtcggag
     1501 ccgaccacca gcgctttgtt cgccttgccg ctgcgaacga ataaatcgcc caccgcaagc
     1561 gcattgagaa accccgcgca ggcggcgccg acgtcaaagg aaaaggcatt gcgcgcgccg
     1621 agcttgtcct cgaggacgca ggcggaactg ggaaacggat aatcggcgga aaccgtgccc
     1681 atgatgatgg catcgagatc tttcgcatcg acgtgagcat catcgagagc gcgcttggcc
     1741 gcttcgtagg ccatgtcggc attgcccttg ccttcttcga gaacgcgccg ttctttgatg
     1801 ccggtgcgca cggtgatcca ctcgtcgctg gtgtcgacca tcttttccaa gtcatggttg
     1861 gtgacgattt tggacggcag ttcggagccg gtgccgagaa tcacgctgcg gcgttcggaa
     1921 cggctcatgg gcacctcccg aaaatcacgc aagcattggt gccgccgaaa ccgaaggagt
     1981 tggaaagcac gactttgacg tcggccttgc gcgcttgatt gggcacatag tcgagatcgc
     2041 aagccggatc gggattttca taattgatcg tcggcggcag catgccgtga tgcagcgcca
     2101 gcgccgagta gacaccttcc accgcgccag cggcaccgag taaatgtccg gtcatcgatt
     2161 tggtcgagct caccgccagc ttcgccgcgg cttcgccaaa aacagtttta atcgccgtgg
     2221 tttcattggc gtcgttatac tccgtcgacg tgccatgggc gttgatatag ctgacatcgc
     2281 tcggcgcaat gccggcgtct ttcaaggcca ggcgcatgca gcgcgccgcc ccttcgccgt
     2341 tgggcgccgg cgcggtcatg tgatgggcgt cgccgttggc ggcgtagccg atcacttcgg
     2401 cgtagatctt ggcgccgcgt tggacagcat gatcgcgctc ttcgagaatc aaaataccgg
     2461 agccctcgcc gataacgaaa ccgtcgcgct ccttatcgaa ggggcggctg gcgcgctcgg
     2521 gctcgtcatt acgcgtcgat aacgctttca tcgcggcgaa accgcccacg cccagcggcg
     2581 tgatcgccgc ctcagcgccg ccggcaatca cggcatcctg caaaccgcgg cgaatcatat
     2641 gataggcctc gccgatcgcg tgggtgcccg aggcacaggc cgaggtcggg gtaaagttga
     2701 tgcccttggc gccgtagcga atcgccacat gaccgggcgc tagattggaa atgactttag
     2761 gaatgaaaaa tggcgatatc ttgcgcggcc caccggccat cagcgcttct ttggtgacct
     2821 cgagggtatc gaggccattc atgccgacgc cgatgatgac gccgacgttc tcggcaaact
     2881 ccccttcgat cttgagaccg ctgtcggcca tggcctgagc cgaagcgccc atggcgtagt
     2941 gaatgaagag atccattttt ttgatctctt tcgcttcgat ataatcttcg gctttgaagt
     3001 cgggcacttc gccagcgatt cgcgaggcaa acgcatcggc gttgaagcgg ctgatcttgc
     3061 ggatgcccga gcggccggcc atcaaagcgt gccaattttt ttcgactccg gtgcccaatg
     3121 gcgtgaccag gccaataccc gtcacgacaa ctcggcgtgc ttcagttgtg ttcacgatac
     3181 ttaaccaatc tttaatggat ttgaaacatc acgataaagg agaccttccg gtgaatcaat
     3241 aggactttca agttagcgat aacgctcatg aagctgttga atgtggcgaa tcagcggagc
     3301 gatttggctg tccctcgacc tggccgcgtc gccagcccgg gctgcgccgg attgcatggc
     3361 agccagcacc gctgccaccg acccgcgcaa gccggcaagg tcgtaaccgc cttcgagaag
     3421 aaaggcgatc ttgccatcgg cgaatctatc tgcgagcccg agtaaccggg tcgccatgag
     3481 cgcaaatcct tcgtcgctca ctcccatgcc gcccagcggg tcgcgccggt gcgggtcaaa
     3541 accggcggac accaaaatcc aatcgggaca aaatttttct gccgccggca cgacgatatc
     3601 gtgaaacgcc tgagcgtact cggcatcggc gcagccggcg ggcagaggga tattgatcgt
     3661 gtaaccttca ccggcgccgc tgccaacttc gttggccgcg ccgctgccgg ggtaaaacgg
     3721 atactgatga gtcgaaatga acagcaccga aggatcggcg taaaaagcgt cttgagtgcc
     3781 gttgccgtgg tgcacatccc actccatgat gagaattttc ttggcgccgt gcgtgcgccg
     3841 caaatactcg gcgccgatcg ccatggtgtt gaacagacaa aaccccatgg cgcggttgcg
     3901 cagggcatga tgtcccggcg gccgcaccag agcgaaaccg ttgcggcaat ctttagcagc
     3961 gaccgcatcg agcagaccga tgaatccgcc cacggccaat aaactgacag cgaacgaatc
     4021 gcggcaagtg atcgtatcgc cgtccaaggc gtagcggtta tgccgcgccg tcgcttcgat
     4081 aagtttgatg tgttcttcgc catgggtcgc tgcgatatcg gcgcgcttgg ccggttgggg
     4141 cggcagcaat tgaaatttcg ccgcgtcaag ttcactggcc aagtcgagca acactttgac
     4201 gcgctcgggc cgctccgggt gggactcgcc gggctggtgt ttcaaatatt ct
//
LOCUS       DATIRS010001163         3263 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1071350, whole genome shotgun sequence.
ACCESSION   DATIRS010001163 DATIRS010000000
VERSION     DATIRS010001163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3263)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3263)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3263
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1071350"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(179..1048)
                     /locus_tag="VLM90_14890"
     CDS             complement(179..1048)
                     /locus_tag="VLM90_14890"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSQ14314.1"
                     /translation="MAAEEKTLLLGAEAGAVADDASAATPRRARRKEHGASWTFLLRG
                     GSILAMIAVWWVMTFFFPPSLIPLPSATFSEVISIVSTGQFFSEMGATLRRVGVGFGI
                     AMMVAIPLGILMGTVKNLESFFEPPVILGLTMPGLVWAVMAIMFFGLSEISAYAAVAV
                     TIMPMLAISLWQGTKSIDKDLIDMSTAFRASPWSKIVDVILPQLISHILAAIRYGLGL
                     AWKVVVVVEMFGFSNGVGYQVVRGFNVFSMKQVLAWAITFLIVMIVIEFGVIGWLEIK
                     VTRWRPRIEAWRR"
     gene            1350..2372
                     /locus_tag="VLM90_14895"
     CDS             1350..2372
                     /locus_tag="VLM90_14895"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ14315.1"
                     /translation="MKNSLSKLLVLSVLSVLFLRAASAQDQFFKGKTVRVIVPFAAGG
                     GYDIYSRIMGRHMGKYIPGNPVFVVDNMTGAGGLIGVNHVYKVAKPDGLTMATPIGTM
                     FVDQLIGKPGIEFDGRKFEYIGAPAQDTQLLIVHKRTGLKSVEQWLAHPTPVKFGSTG
                     PGSANESIPKIAKEALNLPLQVVSGYKGSSVIRLAFNSGEVDGVANAWESMVSTWPQE
                     TQNGDAVVLLQAAGKRHADLPNVPLVIDYAKTDMAKKLVQGVINNFGATARPYVVTPG
                     TPKARVEMLRKAFMDTMRDPEFGAELKRAKLDLNPLDGATLDRNIRELFALDKALIPK
                     LTEILK"
     gene            2538..>3263
                     /locus_tag="VLM90_14900"
     CDS             2538..>3263
                     /locus_tag="VLM90_14900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14316.1"
                     /translation="MVQGRAPGGQGDIRVRALLPILQKNLPGNPTIVSEYMDGGGGRK
                     AANHLFRVARPDGLTIGNIGEGFVSSAVLGEGGVQYEIDKFIYLGAGSSQTNYVFYTR
                     SQLGLNSVEKLRAASGIRVGGQTVGHSIYFLGRLFTWLMELKEPRFVPGYSGPDLDAA
                     LLQGEIDARASVPDDITRRGEWLEKGMVHWQALFEIPRGYRVPHPAFSKIISLDTFAR
                     TDRGRKILIMARNFRLIGGPYILP"
BASE COUNT          741 a          986 c          893 g          643 t
ORIGIN      
        1 tttctcgcgc caaggcgcaa agacgtcaag tgacgggccg aggcccgtca tgccaagtac
       61 atgcgcggga tctacgcgag atttctccca tcggtcgaaa tgacatgttt ctctttcctt
      121 cgcgcctttg cgtctttgcg ggagacactc cgacttgttt tgcgtttttt gcggctattt
      181 atcttcgcca tgcttctata cgtggccgcc agcgcgtcac tttgatttca agccagccga
      241 tgacgccaaa ctcgatgacg atcatgacga tcaaaaaggt aatcgcccag gcgagcacct
      301 gcttcatcga aaagacgttg aaaccgcgca cgacttggta gccgacgccg ttgctaaaac
      361 cgaacatctc gacgaccacc acgactttcc acgccagccc caaaccgtaa cggatcgccg
      421 cgaggatatg cgagatcaac tgcggcaaga tgacatcgac gatcttcgac cacgggctgg
      481 cgcgaaacgc cgtgctcatg tcgatcaaat ctttatcgat ggacttggtg ccttgccata
      541 ggctgatcgc cagcatcggc atgatcgtca ccgccacggc ggcgtaggcg ctaatctccg
      601 acagaccgaa gaacatgatc gccatcaccg cccaaaccaa ccccggcatg gtcagtccga
      661 gaatcaccgg cggctcgaag aagctttcca ggttcttcac cgtgcccatg aggatgccga
      721 gaggaatggc gaccatcatg gcgatgccga atccgacacc gacacggcgc aaggttgcgc
      781 ccatctcaga aaagaattgg ccggtactga cgatcgaaat cacttcggag aaagtcgccg
      841 acggcagcgg aatcaaactt ggcgggaaga aaaatgtcat gacccaccag acggcgatca
      901 tcgccaggat cgacccgccg cgcaagagaa aggtccacga agcgccatgt tctttgcgcc
      961 gcgcccggcg cggcgttgcc gcggatgcgt cgtccgccac cgccccggct tcggcgccga
     1021 gaagcaaggt tttttcttcc gctgccatga tgctggggaa tctatggtta atgggttttt
     1081 ctgtcaatga ggattcagcc gggaggccac cggctaacgg ttgatgagcg aggcggagat
     1141 cagttaatgt cagcgctgga tctaaggaga gcgaggaata tgttaattca aaccgcagcc
     1201 tttgcggcga tctcactgtt gctgagcgcg ttaacatgtc ccatggcagc gcaagccgcc
     1261 agtgaactca ccaccatccg catcgcccac aacggcttct ccgggcgaaa aactacacgc
     1321 cgcagctgga gtaatggagt actgagccta tgaagaactc gcttagcaag ttattggtcc
     1381 tatccgtcct atcggtctta ttcctaagag ctgcttccgc ccaggaccag ttcttcaaag
     1441 gcaagaccgt gcgcgtcatc gtgccgttcg ccgccggcgg cggttacgat atctattcac
     1501 gcatcatggg ccggcacatg ggcaaataca ttcccggtaa tccggtgttc gtcgtcgata
     1561 atatgaccgg cgccggcggg ctcatcggcg tcaaccatgt ctacaaagtc gccaagcccg
     1621 acggcctgac catggcgacg cccatcggca cgatgttcgt cgatcaactg atcggcaaac
     1681 cgggcatcga gttcgacggc aggaaattcg agtacatcgg cgcgccggcg caggacaccc
     1741 aactgctcat cgtccataag cgcaccgggt tgaaaagcgt cgagcagtgg ctcgcccacc
     1801 cgacgccggt aaaattcggc agcaccggcc ccggctcggc caacgaatcg atcccgaaga
     1861 tcgccaagga agcgctcaac ctgccgctcc aagtagtttc cggctacaaa ggcagctcgg
     1921 tgatccgctt ggcattcaac agcggcgagg tcgacggcgt cgccaacgcc tgggaatcga
     1981 tggtttccac ctggccgcag gaaactcaga acggcgatgc cgtagttttg ctgcaggccg
     2041 ccggcaagcg ccatgccgat ttacccaacg tgccgctggt catcgactac gccaagacgg
     2101 acatggcgaa aaaactggtg caaggcgtga tcaacaactt cggcgccacc gctcgtccct
     2161 acgtcgtcac cccgggcacg ccgaaagcgc gggtcgagat gttgcgcaaa gccttcatgg
     2221 acaccatgcg agatcccgag ttcggcgccg agttgaaacg cgccaaactc gatttgaacc
     2281 cgctcgacgg tgccaccctc gatcgcaaca tccgcgaact attcgccctc gacaaagcgc
     2341 tgatccccaa gttgacggag attctcaaat gaccctcttt tttgcgtcgg ttgataaaaa
     2401 ccactacgga gattgaaatg gccaagcaaa aatcgcgatc tcagcgcata ttgaaaattg
     2461 cccttgcggt tattactctc acatgggcca cccctatcct tgcacaaacc gcttattaca
     2521 agggcaagac tatcactatg gtgcagggcc gggcacccgg cggacagggc gacatccgcg
     2581 tacgggcgct ccttccgatt ctccaaaaaa atctacccgg caatcccacc atcgttagcg
     2641 agtacatgga cggcggcggc ggacgcaaag cggccaacca tctgttcagg gtggcgcggc
     2701 ccgacggttt aaccatcggc aatatcggcg agggttttgt atcgagcgcc gtgctgggcg
     2761 aaggcggcgt gcaatacgag atcgataagt ttatttacct cggcgccggc agttcgcaga
     2821 ccaattatgt tttttataca aggagccagc tgggcttgaa cagcgtcgaa aaactccgcg
     2881 ccgcctcggg aattcgggtt ggcggccaga ctgtcggtca cagcatctat ttcctcggcc
     2941 ggttgttcac ctggctgatg gaattaaaag aacccagatt tgttcctgga tactcaggtc
     3001 ccgacctcga cgcggcgttg ctccagggcg agatcgacgc gcgcgcgtcg gtgccggatg
     3061 acatcacgcg ccgcggcgaa tggttggaaa agggtatggt tcactggcag gcattatttg
     3121 aaatcccccg cggctatcgc gttccccacc cggccttcag taaaatcata tcgctggata
     3181 cctttgcgcg gaccgatcgc ggcagaaaaa ttctcatcat ggcgcgcaat ttcaggctga
     3241 tcggcggtcc ctacatccta ccg
//
LOCUS       DATIRS010001164         1645 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1661170, whole genome shotgun sequence.
ACCESSION   DATIRS010001164 DATIRS010000000
VERSION     DATIRS010001164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1645
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1661170"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..304)
                     /locus_tag="VLM90_14905"
     CDS             complement(<1..304)
                     /locus_tag="VLM90_14905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14317.1"
                     /translation="MKLNLSSILVLALALVVNSSPAGAQPKKLRPLRIALPSHSVSST
                     PIYIARSLGIFESLGFEPQILVLEPRAALAALLTGDLDFYTAAGTTGRAALRGVPVR"
     gene            complement(478..1449)
                     /locus_tag="VLM90_14910"
     CDS             complement(478..1449)
                     /locus_tag="VLM90_14910"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14318.1"
                     /translation="MFRITRVALVAGFVAVVLTWPFCSSSALAQQKPKLKPLHIALAN
                     NSVTMTAIYVAKHLGIFESYGFDARVLVLEPRAGLAALLAGELDFYTAIGSTARAALR
                     GLPVRVGLVALNRPDFSVVATKDIASFEQLRGRVIGAYTPQGTVNVVLHEMMRRRGFK
                     LDDYKVVNAGTARAAALSGGAVQVAVLNSVETVRMVKAGFHVLGRASDDLELPQSGLG
                     MSLGSMQSRRDFLRPGVQAVLDAIRVIVNQKDKTVPVLMKQLALSQDEANYVYDAIRP
                     GWALDGRPTANAIKLDAELSQRDMGLKELPRVEQTYDFSMLDELTKK"
BASE COUNT          361 a          518 c          464 g          302 t
ORIGIN      
        1 ctcgaaccgg cacgccgcgt agcgcggcgc gaccggtggt tcccgccgcg gtgtaaaaat
       61 ccagatcccc ggtgagcaac gcggcgagcg cagcccgtgg ctcaagcacg aggatctgcg
      121 gttcgaatcc caggctctca aagatcccca gactgcgcgc gatataaatc ggcgtcgagc
      181 tgactgaatg gctcggcaac gcgattctaa gcgggcgcag cttcttcggc tgcgcgccgg
      241 cgggagaact gttgacgact agcgccagcg ccaaaaccaa gatcgaactt agatttagtt
      301 tcatcccacc gactcctcta aaccgaacgc gcctcggctc caagccgaga ggttttgcat
      361 gtaaccaata gaaatcgact cttcctatct gttcgcgtga acgcgagaga cttcagctat
      421 tcccgaaaga aaccatcgac tgagcgctaa gtcactaact ccgaacgcct agttccgcta
      481 ttttttcgtc aattcatcca acatggaaaa atcgtaggtc tgctccactc gcggcaactc
      541 cttcaacccc atgtcgcgct gcgaaagctc ggcatcgagt ttaatcgcgt ttgcggttgg
      601 ccggccgtcc agcgcccagc ctgggcgaat ggcatcgtag acatagttgg cttcatcctg
      661 gctcagcgcc aactgtttca tcaacaccgg cacggtctta tccttttgat tgacgatcac
      721 gcggatggca tcgagcacgg cctggacgcc cggacgtagg aagtcacggc ggctttgcat
      781 gctgccgagc gacatgccca agccgctttg cggcagctcc agatcgtcgc tcgcccggcc
      841 caggacatga aatccggctt tgaccatgcg cacggtctcg acgctgttga gcaccgccac
      901 ctgcaccgcg ccgccgctca acgccgcggc gcgcgccgtc ccggcgttga cgactttgta
      961 gtcatcgagt ttaaagccgc gccggcgcat catttcatgg agcacgacat tgactgtccc
     1021 ctgcggcgtg taggcgccga tcacccggcc gcgcagctgt tcgaagctgg caatgtcctt
     1081 ggtcgcaacc accgagaagt cggggcgatt gagcgccacc aggccgacgc gcaccggcaa
     1141 accgcgcagc gccgcgcggg cggtggaacc gatggcggtg tagaaatcca attctcccgc
     1201 cagcagggcc gccaaaccgg cgcgcggttc caggaccaac acacgggcgt cgaagccgta
     1261 gctctcaaag atacccaggt gcttggccac atagatcgcc gtcatggtca ccgaattgtt
     1321 ggccagggcg atatgcaggg gcttaagctt gggtttttgc tgggctaagg ccgaactgga
     1381 acaaaatggc caggttaaaa cgacggccac gaatccagcg acaagggcaa cccgggtgat
     1441 gcgaaacatt ccgcctcctt cagtcctctt cctcataccc gcgtcgaatc gatactgtca
     1501 aggtaaagag ttcgccagcg aggagtaaga tgggaacatt caccaccaag gcctagcgcg
     1561 gcgcagccgc aaccgaaact cggaatatct cccgccaagg cgccaagttc gcaaaggtcg
     1621 gaaaataaga tggtgcagac cgttg
//
LOCUS       DATIRS010001165         2163 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1857519, whole genome shotgun sequence.
ACCESSION   DATIRS010001165 DATIRS010000000
VERSION     DATIRS010001165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2163
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1857519"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..277
                     /locus_tag="VLM90_14915"
     CDS             <1..277
                     /locus_tag="VLM90_14915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14319.1"
                     /translation="QTVGKAAGRRADVKRNLIFNVDGELTQGLFEFEAAAADVERRSL
                     DTDLSTEIDQATDFGHGLIIDEDFASDNFAPAFFPAANQLALDQEKI"
     gene            complement(274..822)
                     /locus_tag="VLM90_14920"
     CDS             complement(274..822)
                     /locus_tag="VLM90_14920"
                     /inference="COORDINATES: protein motif:HMM:NF014799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HSQ14320.1"
                     /translation="MLVTAVDHSGPIALRYPRGAGWGVALDAEPKHLEIGRAELLRDG
                     SDIVIAAIGQTVMPALKAAQDLAPLGISAAVVNSRFVKPLDKDLLRALLPRVPRLITV
                     EDHVTAGGFGSAVIEFLADDNISGVEIRRLGVPDRFIPHGTQDELRKMCGFDKDAIAQ
                     AALQMVRRGKKKSREGWERGSA"
     gene            complement(832..>2163)
                     /gene="dxs"
                     /locus_tag="VLM90_14925"
     CDS             complement(832..>2163)
                     /gene="dxs"
                     /locus_tag="VLM90_14925"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HSQ14321.1"
                     /translation="YPSDLRRFSVDQLNQLAGEMREEVISVVSEVGGHFASTLGAVEL
                     TLALHYVFNTPEDRIVWDTGHQAYAHKLICGRRERLATIRQLGGLSGFLSREESEYDV
                     FGAGHAGTSISAALGMVEAKYLERSKRKVVAVISDGGLSAGLTYEGLNSAGHLDRDLI
                     VILNDNEHFIDPRVGAVSSFLSKQFTTDLGVRLQKNLSNLLKSLPRGENLKHLARKMR
                     DSFLSLVTPGFLFESLGFQYVGPIDGHNLSEMITTLENIKKVEGPTLVHVMTKKGKGY
                     APAEADPIKFHAVTPFHVLTGKAKKEKGPIPTYTEIFGQTLVRVAKQNPKVVGITAAM
                     GSGTGIDKLAREIPERTYDVGIAEQHAVTFAAGMATEGFIPVVAIYSTFLQRGYDEIL
                     HDVCLQNLHVVFALDRGGLVGADGPTHHGVFDFSYLRSIPNIVIMAPKDEN"
BASE COUNT          454 a          665 c          588 g          456 t
ORIGIN      
        1 gcaaacagtc ggtaaagccg ccggtcgacg cgccgacgtc aagcgcaacc ttatctttaa
       61 cgttgatggc gaattgacgc agggcctttt cgagtttgaa gccgccgcgg ctgacgtaga
      121 gaggcgcagc cttgacacgg atctgagcac cgagatcgat caagctaccg actttggtca
      181 cggcttgatc attgacgagg acttcgccag cgataatttt gcgccggcct tcttcccggc
      241 tgccaaccaa ctggcgctcg accaagagaa gatctaagcg ctccctcttt cccatccctc
      301 tcgacttttc ttcttcccgc gccgcaccat ctgtaacgcg gcctgggcga tcgcgtcctt
      361 gtcaaaaccg cacatttttc tcagttcatc ctgggtcccg tgagggataa agcggtcggg
      421 cacccctaat cgcctgattt cgacgccact gatattatca tcggcgagaa actcgatgac
      481 cgcgctacca aaaccgcccg cggtcacgtg atcctccacc gtgatcaagc gcggcacacg
      541 aggcaacaaa gcacgcaaca aatccttgtc cagcggtttg acgaagcggc tattgaccac
      601 cgcggcgctg ataccgagcg gcgccagatc ctgagccgct ttcaaagccg gcattaccgt
      661 ctgaccgatg gccgcgatca cgatatcgct gccgtcgcgt aaaagttcag ccctgccgat
      721 ctcgagatgc ttcggctcgg cgtccaacgc cacaccccag cccgcgccac gcggatagcg
      781 caacgcgatg ggtccggaat gatcgacggc ggtgacgagc atatgctgca attagttttc
      841 gtctttcggc gccatgatca cgatatttgg tatcgagcgc aggtaggaaa aatcgaatac
      901 gccgtgatgc gtcgggccgt ccgcgccgac cagtccgccg cggtcaagcg cgaagaccac
      961 atgcagattt tgcaaacaca catcgtgcaa aatttcgtcg tagccgcgct gcaagaacgt
     1021 cgagtaaatc gccaccaccg ggatgaaccc ttcagttgcc atgccggcgg cgaaagtcac
     1081 ggcgtgctgc tcggcgatac cgacatcgta agtacgctcg ggaatctcgc gtgccagctt
     1141 atcgatgccg gtgccgctgc ccatcgccgc ggtgatgccg acgactttcg ggttttgttt
     1201 ggcgacgcgc accagcgttt gcccgaagat ctcggtgtaa gttgggatcg gccccttttc
     1261 ttttttggct ttgcccgtaa gcacgtggaa cggcgtgacg gcatgaaact tgatcggatc
     1321 cgcttccgcc ggggcgtagc ccttgccctt tttcgtcatc acatggacaa gcgtgggccc
     1381 ctccactttc ttgatgtttt ccaacgttgt gatcatttca ctcaggttgt gaccgtcgat
     1441 gggtccaacg tattgaaacc ccagactctc gaacagaaag cccggcgtta ccaggcttaa
     1501 aaaagagtcg cgcatcttgc gcgccaagtg cttgagattc tcgccgcgcg gcaggctctt
     1561 cagcaaattg gataagtttt tctgcaagcg cacgccgaga tccgtggtga actgtttact
     1621 gagaaaagac gacaccgcgc cgactcgggg atcgataaaa tgctcgttgt cgttcaaaat
     1681 gacgatcaga tcccgatcga gatgaccggc cgagttgagt ccttcgtagg tcaggccggc
     1741 gctcaaaccg ccgtcgctga ttaccgcgac caccttgcgc ttcgatcgtt cgagatactt
     1801 cgcttccacc atgccgaggg ccgccgatat cgacgtgccg gcgtgccctg caccgaagac
     1861 gtcatattcg ctttcctcgc ggcttaagaa cccgctcaag ccgccgagtt ggcgaatggt
     1921 cgcgagccgc tcgcgccggc cgcaaatcaa tttatgcgca taagcctgat ggccggtatc
     1981 ccaaacgatg cggtcctccg gcgtattgaa aacgtaatgg agcgccagag tcagctcgac
     2041 ggcgccgagc gtggaagcaa aatggccgcc gacctccgac acgacggata tgacctcttc
     2101 tctcatttcc ccggcgagct ggttcaactg gtcgacggaa aaacgcctta ggtcgctcgg
     2161 ata
//
LOCUS       DATIRS010001166         4967 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_284077, whole genome shotgun sequence.
ACCESSION   DATIRS010001166 DATIRS010000000
VERSION     DATIRS010001166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4967)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4967)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4967
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_284077"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..910)
                     /locus_tag="VLM90_14930"
     CDS             complement(<1..910)
                     /locus_tag="VLM90_14930"
                     /inference="COORDINATES: protein motif:HMM:NF025056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003953 - NAD+ nucleosidase activity
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="toll/interleukin-1 receptor domain-containing
                     protein"
                     /protein_id="HSQ14322.1"
                     /translation="MSGIFISYRREDSAPYAGRLCDRLCQHFGADRVFMDVDDIPPGA
                     DFAAHIGAKIGACDALLAVIGKQWLTTRNSEGQLRLGDPDDLVSREIALALQRRILVI
                     PVLVEGASMAKAGELRGDLKPLAQRNAMTIGDDDFPGDVAKLIKALEALPGLAKPTRQ
                     PADQWKADLRQRLRRRLVWKIPLIILLVSFAAWWQWRKDAVPPSSNAQQTAAAKIAAA
                     VSGTWRGDVTYPWGDKYSERFLFTAEGAKLFGIATFLASKRAIEDGQIAGETILFRVR
                     YEEVSGGDSRTRLNRYEGKLLGDEIQL"
     gene            complement(926..2653)
                     /locus_tag="VLM90_14935"
     CDS             complement(926..2653)
                     /locus_tag="VLM90_14935"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HSQ14323.1"
                     /translation="MTAKLDPITLELIHSKVTSVIEEMRIVLFHSGYSTVLRESEDGS
                     AGLLDARLRTVAVSKKLPLHFGSFAAVADHLGEYYQMDDFADGDVVVFNHPYAGNVTH
                     PNDTVVLMPVFAQEQLVAFTATLAHKADLGGPRAAHVAQDIWEEGLVIPPTKLYSRGK
                     VNPEIERFIAANSRIPVETLGDLRGQVAACRVGAQRVEELCERFGIETVRDGCGELMA
                     RVAGQLRDALDAIPDGTREAEGFLDHDGIGYERQRRVHVLVTKQGREILFDFSASDEQ
                     ARGPVNVTSALIKNTCYFGLMAMTDASLPFNHGFVDVVQTRFKEGTVVCPRHGAPVSY
                     YVPLAYLTADVVLHALGKFIPERAVGSSGGGGGVRIASSGGKSGKPWVFMELLDTALG
                     ASGVQDGISLIHGTLGVGQFRPGPIEIHETEFPMRVTRFDVRADSGGPGKFRGGLGCI
                     REYQLLDDAAVRVRGKGDMRSKCPPWGVLGGKAARTGFYALNGDELSETVREAVLAPG
                     DTVQVNMNAGGGYGDPLERDPEAVLGDVLDGYVSLQGARDDYGVAIDPATASVDLAAT
                     GKLRHALRG"
     gene            complement(2835..4883)
                     /locus_tag="VLM90_14940"
     CDS             complement(2835..4883)
                     /locus_tag="VLM90_14940"
                     /inference="COORDINATES: protein motif:HMM:NF014071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HSQ14324.1"
                     /translation="MYRVGIDIGGTFTDFSVLDEQSGEVVNSKVLSTPADLTEGVMQA
                     LDEFFGDGRLPEDVNFLFHATTVATNALLERKGAKTWLLITEGFTGVYETPELGETRS
                     ATYDYLSYPKPPMLVRQRETMQIPERVDFRGNVLKALDETETRRRLARLKGTGVESVA
                     VCLLFSFMNAAHEQRLRELVAEVVPDVQVYLSCETLPQIREYPRLTTTVVNAYVAPVV
                     NRYIHRLEEALRSRRITKPLYIMQSNGGSLTGGALKNIPVRMIESGPAAGVLGAAHIG
                     RMTNQLKIISFDMGGTTAKAGIVQDGEPRIVPRFQAGEWLISTPSLDLVEIGAGGGSI
                     AWIDKSGLLKVGPRSAGADPGPACYPNGGALPTVTDADVTLGWLNPEFFVGGKFHLNP
                     KAAERAIAEHIAAPLKLPTIEAASGIIKIVSSGMVEALRLVTVSRGEDPREYVLVAFG
                     GAGPVHAALLAQELKIPRVIVPAAPGVHAAMGLLVSDLKRDYVQTHFADLESVDVGEL
                     QQRFDAMEALAQQEFESQGIAPEQIVHERAIDLRYSIQKYELPVPVARAGLKPDAISA
                     WRRAFDEIHEKHFGSRAADQKVEIVNYRLTTKVIVPKPKVAELPAQGAACDAAIKARR
                     RAYFDGWHDTPVYDRAKLRSGNRLGGPAIIEQMDSTTVVHPGQAAHIDRFGNIIIELA
                     "
BASE COUNT          945 a         1589 c         1455 g          978 t
ORIGIN      
        1 gcagttggat ttcgtctccc aggagcttgc cctcgtagcg gttcaaacgg gtgcgcgagt
       61 cgccgccgct gacttcttca tacctgactc tgaatagaat cgtctcgccg gcgatctgcc
      121 cgtcttcgat ggcccgcttc gaagcaagaa acgtcgcgat gccaaacaac ttcgctccct
      181 cggccgtgaa caggaatctt tcgctgtact tatcccccca ggggtaagtc acgtcccctc
      241 tccaggtacc ggacactgcc gcggcgatct tggcggcggc agtttgttgc gcattactcg
      301 acggcggcac ggcatctttg cgccactgcc accaggcggc gaagctgacg agcaatatga
      361 tcaatggaat cttccagacc agccgacgcc gcaatcgttg gcgcaagtcg gctttccatt
      421 gatcggcggg ttggcgagtt ggtttggcca gtcccggcag cgcttcgagc gccttgatca
      481 gcttagcgac atcgcctggg aaatcgtcat cgccgatcgt catcgcgttg cgctgcgcca
      541 agggttttaa atcaccgcgc agctcgccgg ctttggccat gctcgcgcct tcgaccagca
      601 caggaatgac gaggatgcgg cgctgtaaag ccagtgcgat ctcgcggctg accagatcgt
      661 cggggtcgcc gaggcgcaac tggccctcgc tgttgcgggt ggtgagccac tgtttgccga
      721 tcaccgctag caacgcgtcg caagcgccaa tcttggcgcc gatatgggcg gcgaagtctg
      781 cccccggcgg aatgtcatcg acatccatga aaactcggtc cgcgccaaaa tgctggcaca
      841 gccggtcaca caaccggccg gcatagggcg cactgtcttc acgccgataa ctgatgaaga
      901 tgccggacat tggtgcgtga ctgcgtcatc cgcgcagcgc gtggcgcagc tttcctgtgg
      961 ccgctaaatc gacggatgcc gtcgctggat cgatcgccac gccgtagtca tcgcgagcgc
     1021 cttgtagcga cacatagccg tctaggacgt cacccagcac cgcctctgga tcgcgctcga
     1081 gcggatcgcc ataaccgccg ccagcattca tattgacctg aacggtgtcg ccgggcgcga
     1141 gcaccgcttc gcgcacggtt tctgacagct cgtcgccatt gagcgcataa aacccagtgc
     1201 gcgcagcctt gccgccgagc acgccccagg gcggacattt gctgcgcatg tcgcctttgc
     1261 cgcgcactcg caccgcggcg tcgtcgagca actgatattc gcggatgcaa ccgagtccgc
     1321 cgcgaaactt gcccggtccg ccggaatcgg cgcgcacgtc gaatcgggtc acgcgcatgg
     1381 gaaattcggt ttcatgaatt tcaatcgggc cgggacggaa ttggccgacg ccgagggtgc
     1441 cgtgaatcaa ggaaatgccg tcttgaacgc cgcttgcgcc taatgcggta tcgagcagtt
     1501 ccatgaacac ccagggcttg ccgcttttac cgcccgagct ggcgatgcgc acgccgccgc
     1561 cgccgccgga tgaaccgacc gctctttcgg gaatgaattt tcccagcgcg tggagcacga
     1621 catcggcagt aagataggcc aagggcacat aataggaaac cggcgcgccg tggcgcggac
     1681 agaccaccgt gccctctttg aatctggttt ggaccacgtc gacgaaaccg tgattgaacg
     1741 gcaagctcgc gtcggtcatc gccatcaagc cgaagtagca ggtgttcttg atcaacgctg
     1801 aagtgacgtt gaccggcccg cgcgcctgct cgtccgaagc gctgaagtcg aaaagaatct
     1861 cccggccttg cttcgtcact aggacatgga cgcggcgctg gcgctcgtag ccgatgccgt
     1921 cgtggtcgag aaaaccttcg gcttctcgag tgccgtcagg tatggcgtcg agggcatcgc
     1981 gcaattgccc ggcgacccgc gccatcaact cgccacagcc atcgcgaacc gtttcaatgc
     2041 cgaaccgttc acagagttcc tcaacccgtt gggcgccgac ccggcaagcc gcaacttggc
     2101 cgcgtaagtc accgagggtt tccaccggta tccggctatt ggcggcgatg aatctttcaa
     2161 tctccggatt gaccttgccg cgcgaataga gcttggtcgg tggaatcacc aacccttctt
     2221 cccagatatc ctgcgccaca tgcgcggcgc gcggcccgcc taaatcggct ttatgcgcca
     2281 gcgtcgcggt gaaggcgacc agctgctcct gcgcgaacac cggcatcagc accaccgtgt
     2341 cgttggggtg agtcacattg ccggcgtaag ggtggttaaa aacgacgacg tcgccgtcgg
     2401 cgaagtcatc catctggtaa tattcgccga gatgatcggc caccgcggca aaagagccga
     2461 aatggagcgg cagctttttc gataccgcta ccgtgcgcaa ccgggcgtcc aacaggccgg
     2521 cgctgccgtc ttcggactct cgcagcacgg tcgagtaacc gctgtgaaac agcacgatgc
     2581 gcatctcttc gatgacgctc gtcactttcg aatggatcaa ttccaaggta atcggatcga
     2641 gtttagccgt cataagttct ccgtggccag tgctaaatgg agtagcccat tcgcatccct
     2701 gatactgacc agcctgccca atccgtcatt ccggcgcagg ccggaatcca tcttccgagt
     2761 tcggatggat accggctttc gccagtatga cgaaccgccg tcatgtaatg gttcgctatc
     2821 agtggtaatc tcgctcatgc cagttcgatg atgatgttgc cgaagcggtc gatgtgcgcc
     2881 gcttgccccg gatgaaccac agtggtcgaa tccatctgtt cgatgatcgc cggcccgccc
     2941 aggcgatttc ccgaacgcaa ctttgcgcga tcgtataccg gcgtgtcgtg ccagccgtcg
     3001 aagtaggccc ggcgccgcgc tttgatcgcc gcgtcgcaag ccgcgccttg cgccggcaat
     3061 tcggcgacct taggtttcgg cacgatcacc ttggtcgtga gccggtaatt gacgatttcg
     3121 accttctggt ctgcggcgcg cgaaccgaaa tgtttttcat gaatttcatc gaaggctcgg
     3181 cgccaggcgg aaatcgcatc cggtttcagg ccggcacgcg ccaccggcac cggcaactcg
     3241 tatttttgaa tgctgtagcg cagatcgatg gcgcgctcat ggacgatctg ctcgggcgca
     3301 attccctgag actcgaactc ctgctgcgcc agcgcttcca tggcgtcgaa gcgctgctgc
     3361 agctcgccca cgtcgacgga ttccaggtcg gcgaaatggg tttggacgta atcgcgcttc
     3421 aagtcggaca ccagcaatcc catcgccgca tgcacccccg gagcggctgg gacgatcacc
     3481 ctggggattt tcaattcttg cgcgagcagc gcggcgtgca ccggtccggc gccgccaaag
     3541 gcgaccaaga catactcgcg cggatcttcg ccgcgcgaca cggtgaccaa ccgcaacgcc
     3601 tcgaccatgc cggagctgac gatcttgatg atgccgctcg ccgcttcgat ggttggcagt
     3661 tttagcggcg cagcgatgtg ctcggcaatc gcgcgctccg ccgccttggg attgagatga
     3721 aacttgccgc cgacaaagaa ttccggattg agccaaccga gcgtcacgtc ggcgtcggtc
     3781 accgtcggca gcgcgccgcc gttgggataa caggccggtc cgggatcggc ccccgcgctg
     3841 cgcggcccga ctttgagcag cccgctcttg tcgatccaag cgatgctgcc gccacctgcg
     3901 ccgatctcga ccagatcgag cgacggcgtc gagatcagcc actcgcccgc ttgaaaacgc
     3961 ggcacgatgc gcggctcgcc gtcttggacg atgcccgcct tcgccgtcgt cccgcccatg
     4021 tcgaaggaaa tgatcttgag ctggttggtc atgcgcccga tatgcgccgc gccgagcacg
     4081 ccggccgccg gccccgactc gatcatgcgc acggggatgt ttttgagcgc gccgccggtc
     4141 aagctgccgc cattggactg catgatgtaa agcggcttgg tgatgcgccg cgatctgagc
     4201 gcttcttcga gccggtgaat gtagcggttc accaccggcg cgacgtaggc gttgactacc
     4261 gtcgtggtca atcgcgggta ctcgcgaatc tgcggcaagg tttcgcagga caaatagacc
     4321 tggacgtcgg gcaccacctc ggcgaccagc tcacgcagcc gctgctcatg ggcggcattc
     4381 atgaacgaga acaacaaaca gaccgccacc gattcaacgc ccgtgccttt gagccgggcc
     4441 aagcgccggc gggtctcggt ttcgtcgagc gctttgagca cattgccgcg aaagtcgact
     4501 cgctcgggaa tttgcatcgt ctcacgctgg cgcaccagca tcggcggctt gggataggaa
     4561 agataatcgt aggtcgcgct gcgcgtctcg ccgagctcgg gcgtttcata aacgccggta
     4621 aagccttcgg tgatcagcag ccaggtcttg gcgcccttgc gctccaacag cgcattggtc
     4681 gccaccgtcg tcgcgtggaa gagaaagtta acgtcctccg gcaatcgccc atcgccaaag
     4741 aactcgtcga gcgcctgcat caccccctcg gtcaaatccg ccggcgtgct cagcactttg
     4801 gaattgacaa cctccccact ctgctcatcg agcacggaaa aatccgtaaa cgtcccgccg
     4861 atatcgatac cgactctata cataacttcg tattgcctca actggttaat agcatagctc
     4921 ttctctattt taaccttctg cgctgggcga gtaggttcaa aagttca
//
LOCUS       DATIRS010001167         1867 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1760162, whole genome shotgun sequence.
ACCESSION   DATIRS010001167 DATIRS010000000
VERSION     DATIRS010001167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1867)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1867)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1867
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1760162"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..377
                     /locus_tag="VLM90_14945"
     CDS             <1..377
                     /locus_tag="VLM90_14945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14325.1"
                     /translation="NTNEPALALMGQVTERGPYAGHPALEHATRGDLPTPGDYYDLLR
                     PLARHLDVWHIVYNHVMAGPEAIVEWFKGSALRPFLDALDDRARGAFLTDYTAQIAAA
                     YPSRYDGKVLLRFPRLFIVASR"
     gene            721..>1867
                     /locus_tag="VLM90_14950"
     CDS             721..>1867
                     /locus_tag="VLM90_14950"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14326.1"
                     /translation="MHKHDTVLDRRQFLRQSAAVGLATLFAPTLAPRAWAASRDRIVI
                     YQGVSLDSLHPYGYSGGGITGIWRHVIEPLIQMDYERNEYVGVLAQSWEFQGRKWTFR
                     LRKGVRFHNGAPFTSKDVAYSIDKLQNDKRSLQGAYMQGVEVETPDDYTVVLTTKTPN
                     ALLLSRLETRFILSKEYGDDLDNATAGTGPYKYVSWQRGGNLVLRRNDEFWGAKPQIR
                     EVIIKGVKEESARVAGLSAGQADLISNVPIEDVDRIAKHPRVRIQKVIGFRMYFLGMN
                     VTMKPFDNKLLRQAINYALDPHVMLKHIYDGHGAVVNGPLGSNWMGFDPKIKRYPYDP
                     KKARELLAKAGYPNGLETKLYLAPDRHLKGREVCEVIADKLGKVGIKA"
BASE COUNT          388 a          560 c          539 g          380 t
ORIGIN      
        1 acaataccaa cgagccggca ctcgcgctta tggggcaggt gacggagcgc gggccctacg
       61 cgggccaccc agcgctcgag catgcgacgc gcggcgacct gccgacgccg ggagactact
      121 acgatttgtt gcggccgctc gcccgccatc tcgacgtctg gcacatcgtc tacaatcacg
      181 taatggcggg gccggaggcg atcgtcgagt ggttcaaggg ttcggcgttg cggccattcc
      241 tcgacgcgct cgatgaccgg gcgcgagggg ctttcctgac cgactacacc gcccagatcg
      301 ccgcggccta tccgagccgc tacgatggca aggtcctgct tcggttcccg cgcttgttca
      361 tcgtcgcatc gcgataatcg cctgcttacc gtaggctttg acccacgttc gatggcaccg
      421 ccgaattaga aacggtgggt ctctccggcc ttaccgcgac ccttgatttg acccgataac
      481 attgccgttc gcttactccc atcaccagcg cagcttcagc tcgctgcgat acactcgttg
      541 gattgcatcg agtcgttcct cgtcgttcat tgtcagggtt gtcatccttc cagcctgaca
      601 caatcacgtt gccgttaacc cctgtcagaa tcgcgttgct gctacaacct cgggaaattt
      661 cattgacagg ttcgtcgtaa gctgaatata agggcgttat ctcagcggtc aggaatccca
      721 atgcataaac atgacacagt gctcgatcgt cgccaattct tgcgacagag cgcagcggtc
      781 ggattggcaa ccctcttcgc gccgaccttg gctccacggg catgggcggc atctcgagat
      841 cgtatcgtca tttatcaagg cgtcagtctg gactcgctcc atccctacgg ctacagcggc
      901 ggcggcatca cgggcatctg gcgccacgtc atcgagccgc ttatccaaat ggattatgag
      961 cgcaatgaat atgtcggcgt gctggctcag tcgtgggagt ttcaggggcg caagtggact
     1021 tttcgtttgc gcaaaggtgt gcgttttcac aacggcgcgc cgtttacctc gaaggacgta
     1081 gcgtactcca tcgacaagct gcaaaacgac aagcgcagct tgcagggcgc ctacatgcaa
     1141 ggcgtcgagg tggaaacgcc cgacgattac acggttgttc ttacgaccaa gactcccaat
     1201 gcgctgttgc tctccaggct ggaaactcgg tttattctct cgaaggagta cggcgacgat
     1261 ctcgacaacg ccacggccgg caccggtcca tacaaatacg tcagctggca gcgcggcggc
     1321 aatttggtgc tgcggcgcaa tgacgaattc tggggcgcga agccgcaaat ccgcgaggtg
     1381 attatcaaag gcgtcaagga agaatcggcg cgcgtggcgg gactgtcggc ggggcaggcg
     1441 gatctgatca gcaatgtgcc catcgaagat gtcgaccgca tcgccaagca tccgcgcgtt
     1501 cggatccaga aagtaatcgg ctttcgcatg tattttctcg gcatgaatgt gacgatgaaa
     1561 cctttcgaca acaagctcct gcgccaggcg atcaactacg cgctcgatcc ccacgtcatg
     1621 ctgaagcata tctacgacgg ccacggcgcg gtggtgaacg gcccgctggg ctcgaattgg
     1681 atgggcttcg accccaagat caagcgctat ccttacgacc cgaaaaaagc gcgcgagctg
     1741 ctggccaaag ccggttatcc gaacggactc gagaccaagc tctatctagc gccggaccgc
     1801 cacctcaaag gcagggaggt ttgcgaagtg atcgccgata agttgggcaa ggtcggcatc
     1861 aaagccg
//
LOCUS       DATIRS010001168         1922 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_185101, whole genome shotgun sequence.
ACCESSION   DATIRS010001168 DATIRS010000000
VERSION     DATIRS010001168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1922
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185101"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..666
                     /locus_tag="VLM90_14955"
     CDS             <1..666
                     /locus_tag="VLM90_14955"
                     /inference="COORDINATES: protein motif:HMM:NF014476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14327.1"
                     /translation="ALFGSGWQAGSHVPAMCAVRPLKRINIFSPTKANREAFVKEIQP
                     KVSAELRAVDSPEEAIREADIIAATTNSLSRVVSAEWVKPGLHLTCVRVPELGDDTIR
                     KVDRLVIHAHQHAPTNYVAGYGEEGIPAHDAIDIIKKGPAHAHEVNVEHPFWLSAPDL
                     KDLVTGKAQGRANAQESTCFLNNIGIGLQFAAVGAAVYSEAIAKGIGRELPTDWFLES
                     VHP"
     gene            1003..>1922
                     /locus_tag="VLM90_14960"
     CDS             1003..>1922
                     /locus_tag="VLM90_14960"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ14328.1"
                     /translation="MAKQRVGYALGYGKFTNVREMAEVMQQAEERGFEMAFFSETVEL
                     MRDSVSSLAAISLATKNMIMGTTQIVRLRGPVVMAQSLATLDELSGGRITAAPGACTK
                     SHARVHALPQDVGATPSEVLREYIESMRLLFTGEKVSYHGKFVNFDNVGLGWKPIRAH
                     IPFYVPATATIGLKLAGAVGDGVILNAVCSPEYTVNALRIIKESAQQAGRDFSKFFVA
                     QIINCSIEDNHQKALDTVRWEVATKLDPVQISFIAGPKMRVGEPYIHKEDIPLFEKAH
                     AHGGMEGLIKAIPDSYVEGMTASGTPDEVK"
BASE COUNT          429 a          521 c          577 g          395 t
ORIGIN      
        1 gcgttgttcg gttccggttg gcaggccggt agccatgtgc cggcgatgtg cgcggtacgg
       61 ccgctcaagc gcatcaatat tttcagtccg accaaggcga accgcgaagc gttcgtcaaa
      121 gaaatccaac ccaaagtgag cgccgaactg cgcgcggtgg attcgccgga agaggcgatc
      181 cgcgaagctg acatcatcgc cgcgacgacc aattcacttt cccgcgtggt cagcgccgaa
      241 tgggtcaaac ccggactgca tttgacctgc gtgcgcgtgc cggagctggg cgacgacacg
      301 attcgcaaag tcgaccgctt ggtgatccac gcgcatcaac acgcgccgac caattatgtc
      361 gccggctacg gggaggaagg catcccagcg cacgacgcga tcgatattat caagaaaggg
      421 ccggcccatg cccatgaagt aaacgtcgag catcccttct ggctgagcgc gcccgatctc
      481 aaagatctcg tgaccggcaa agcccaggga cgggcgaatg cgcaagagtc gacctgcttt
      541 ctcaacaaca tcggcatcgg cctgcaattc gccgccgtcg gcgcagcggt ctatagtgaa
      601 gccatcgcca aaggcatcgg ccgcgagctg ccgacggatt ggtttttgga aagcgtgcat
      661 ccgtagcaag gggttcggga tcggaacgtt gggcggaaag cttgtcctaa gcggatgcga
      721 aggaactgaa tcgcgcaaag agctcacaat acacttactc attaataaat cgcagttatt
      781 tcaaacttaa ccttgctttg attgtcgtcc actagtggat gagatttctc gcttcgctcg
      841 aaatgacagt ttcgctattg ccgtcattgt caacgaagcg agggttcgtg ccaatctgaa
      901 ctaccctccg attgactcgc aagccgcctt tgcgtaggaa tgagtctgta attcgtggct
      961 gtttgagccg atttgaagcg atcaatcaag gagagtttgc gaatggcaaa gcaacgagtg
     1021 ggctacgcgt tgggctacgg caagtttacc aatgtgcggg agatggccga agtaatgcag
     1081 caggccgaag agcgcggctt cgaaatggcg tttttttccg agaccgtcga actcatgcgc
     1141 gactcggtga gttccttggc ggcgatcagc ctggcgacga aaaatatgat catggggacg
     1201 acccagatcg tgcgtttgcg cggcccggtg gtgatggcgc agtcgttggc gactctggac
     1261 gagctcagcg gcgggcgtat cacggcggcg ccgggagctt gcaccaagag ccacgcgcgc
     1321 gtccatgcgc tgccccagga tgtcggcgcg acgcctagcg aagtgctgcg cgaatatatc
     1381 gagtcgatgc gtttgttatt taccggcgag aaggtttcct atcacggcaa gtttgtcaac
     1441 ttcgacaatg ttggtttggg ctggaagccg atacgcgcgc atattccatt ctatgttccg
     1501 gcgacggcga ccatcggctt gaagctggcc ggcgcggtcg gcgatggcgt gattctcaac
     1561 gcggtctgct cgccggaata caccgtcaat gcgttgcgca ttatcaaaga gtcggcgcag
     1621 caggctgggc gtgacttttc caagtttttc gtcgcgcaaa tcatcaattg ctcgattgaa
     1681 gacaatcacc aaaaagctct cgatacggtg cgctgggaag tggcgaccaa gctcgacccg
     1741 gtgcagatct cgtttatcgc cgggccgaag atgcgcgtcg gcgagccgta tattcacaag
     1801 gaagacattc cgctattcga aaaagctcac gcccatggcg gcatggaagg tttgatcaaa
     1861 gcgatccccg actcgtatgt cgaaggcatg accgccagcg gcaccccgga tgaagttaag
     1921 aa
//
LOCUS       DATIRS010001169         1900 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1857972, whole genome shotgun sequence.
ACCESSION   DATIRS010001169 DATIRS010000000
VERSION     DATIRS010001169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1900
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1857972"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(84..587)
                     /locus_tag="VLM90_14965"
     CDS             complement(84..587)
                     /locus_tag="VLM90_14965"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HSQ14329.1"
                     /translation="MSQVKCPSCSREFVRRVVRAGLRDRLAGWFFIYPFKCQICGLRF
                     RSLKWGVRYLRLRPDHREYDRMGMNFPVLFRGDQFDGVGSVTDISMGGCSFTTTSKLT
                     KRAIMRLELKVSEEAAPVIVELAVLRHWQNQLAGVEFLRCDEKERERLQLFVHGLLIG
                     RRSQKPI"
     gene            complement(852..1880)
                     /locus_tag="VLM90_14970"
     CDS             complement(852..1880)
                     /locus_tag="VLM90_14970"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ14330.1"
                     /translation="MKKLLFSFVLIVLSLGNAGAQAPFYQNKTATIVVGYLAGDGYDI
                     WARLLAAHIGKHIPGNPNFVVNNMPGAGSMIAANNIYNVAKPDGLTMAAIGPSLYLDQ
                     VIGKKEVQFDWAKFGWVGSTENTPWLFYMNTNTPFKTIDDVRKAKEAPKCSATSSGTS
                     GHFIPKLLEEAMGAKFTVVMGYQGGSEQDLAFERGEVVCRALSIPTFFAREPFTTWRK
                     KNMVRILLQTGRKRDAKMPDVPTIHELMTEYKTPASTRALVMAILASGDLGRPFVTPP
                     GLPAERLKILREAFRKTMADPGFLADVKARKLEIDPDYGEQLEALAKEIVSQPREISD
                     RMRKLLSE"
BASE COUNT          429 a          565 c          520 g          386 t
ORIGIN      
        1 agatgtaatc ggcatcggcc tatttggcat ggctgggttt ttacagtacc ggcggcgcag
       61 agccccggca gtgagagaag ctattaaata ggtttttgcg atcttcgtcc gatcagcaaa
      121 ccgtgaacga agagctgcaa gcgctcacgc tctttttcat cgcagcgcag aaactcgaca
      181 ccggcgagtt gattttgcca atggcgcagc accgcgagct cgacaatcac cggcgcggcc
      241 tcctcggaca ccttgagttc cagccgcatg atcgcacgct tggtgagttt actcgtcgtg
      301 gtgaagctac agccgcccat ggaaatatcc gtcacgctgc cgacgccgtc aaactgatcg
      361 ccgcgaaaca gcaccgggaa attcatcccc atccggtcat attcgcgatg gtccgggcgc
      421 agccggaggt agcgcacgcc ccacttaagt gaacgaaagc gcaagccgca aatctggcac
      481 ttgaagggat aaatgaaaaa ccagcccgcc agccgatccc tcaggccggc tctgacaacg
      541 cgccggacaa actcgcggga acaactcgga cacttcactt gcgacatggg cgaactctcc
      601 acagactaga tggcatcgtt tctcccacag ctaacatatt ggaaatttcc cgccagacat
      661 gaccggcaag tttttaaccg gcgcgttcgc cacgatctca aatggcggcc ggacaaaaac
      721 aattagcagt gattagcaga cccgccgaaa cggtgctact cggaccaaac tgacatccat
      781 aggaaagttg tctcaagact gtcgcccaga aggccgagca gtttggagcg cacgtgccac
      841 catctagcgg gctactcaga tagcagtttc ctcatgcgat cggaaatctc gcgcggctgg
      901 gagacgatct ctttggcgag ggcttccaac tgttcgccat agtcggggtc gatctctaac
      961 ttgcgcgctt tgacgtcggc caagaaccca gggtcggcca tggtcttgcg aaaggcttcg
     1021 cgcaggattt ttaaacgttc agcgggaagc cccggcggcg tgacaaacgg tcggccgaga
     1081 tcgccggagg ccaggatcgc catgaccaga gcccgagtcg aagccggcgt cttgtactcc
     1141 gtcatcaact catggatcgt cggcacgtcg ggcatcttgg catcgcgctt gcggccggtc
     1201 tgcaacagga tgcgcaccat gtttttcttg cgccaggtgg taaacggctc gcgcgcgaaa
     1261 aaagtcggga tgctgagcgc gcggcaaacc acctcgccac gctcgaaggc caaatcctgc
     1321 tccgagccgc cctgatagcc catgacgacg gtgaattttg cccccatcgc ctcctcgagt
     1381 agcttaggaa tgaaatggcc gctggtgccg ctgctggtgg ccgaacactt gggcgcttcc
     1441 ttggccttgc gcacatcgtc gatggttttg aacggcgtgt tcgtgttcat gtagaacagc
     1501 catggggtat tctccgtcga gccgacccaa ccgaatttgg cccaatcgaa ttgcacttct
     1561 ttcttgccga tcacctgatc gagatacagc gacggcccga tggccgccat cgtcagaccg
     1621 tccggcttgg cgacgttgta aatattgtta gccgcgatca tcgacccggc gccgggcatg
     1681 ttattcacca cgaagttagg attgcccgga atatgcttgc caatatgcgc cgccaaaagc
     1741 cgcgcccaga tatcatagcc atcgcccgcc aggtagccga cgacgatggt cgcggtctta
     1801 ttctgataga acggtgcttg agcgccggca ttgccgagcg acaaaactat cagcacgaag
     1861 ctaaataaaa gctttttcat gacgtcccct taatcagtat
//
LOCUS       DATIRS010001170         2019 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1858007, whole genome shotgun sequence.
ACCESSION   DATIRS010001170 DATIRS010000000
VERSION     DATIRS010001170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2019
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1858007"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(102..1061)
                     /locus_tag="VLM90_14975"
     CDS             complement(102..1061)
                     /locus_tag="VLM90_14975"
                     /inference="COORDINATES: protein motif:HMM:NF014899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14331.1"
                     /translation="MAEIVIGIGTSHSPQLSIRAKDWAKLLGDKDKTDPRLNYQALLQ
                     TAKPGLEAELTEAKFKERDEACLKAVKTLGDALSAARADLVVVFGDDQQEQFHDDNMP
                     MFAIYHGKGLPVVKHNNLRPAAWKDAEEQGWAETAPEYDTASDLAEHLIRALTEAEFD
                     ITRCNKLRAEIGVGHAFSFLYRRILPGTKLPMVPVMVNTYYPPNQPTPKRCYAFGQAV
                     RKAIESWDSNKRVALLASGGLSHVVIDEEIDAMVIDGLKNKKPELLFQLPRKKLHGGT
                     SEILNWVALAGAMEDRDLKYLEYVTTYRSPAATGCGMGFAYWQ"
     gene            1424..1825
                     /locus_tag="VLM90_14980"
     CDS             1424..1825
                     /locus_tag="VLM90_14980"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HSQ14332.1"
                     /translation="MATSRGATLLGPDKLEIREYPIPDIPADGGLVKVEMGGVCGSDF
                     KYLHGGKNGLPYPLILGHEILGRVEKLGKEAAAIHGIEEGDRIIMKGAKGCGRCAHCR
                     RGAARFCKARIGYGGQTTCANPPHLFGAPAV"
BASE COUNT          429 a          604 c          542 g          444 t
ORIGIN      
        1 ccattacatc tccactagcc gctcactacg aataacgcgt cttagcgtcg tgaatccgaa
       61 gaaaccttga acttttgaac ctggaacctt gaacaaatcg tttattgcca ataggcgaag
      121 cccatgccgc agccggttgc ggccggcgag cgataggtcg tgacatattc cagatatttc
      181 agatcgcgat cttccatcgc gccggcgagc gccacccagt tcaagatctc cgacgtgccg
      241 ccgtgcagtt ttttccgcgg cagctgaaac agcaattccg gcttcttgtt ctttaggccg
      301 tcgatcacca tggcatcgat ttcttcatcg atgaccacat ggctcaatcc gccggaggcc
      361 aatagcgcga cgcgcttatt gctatcccag gactcgatcg ctttgcgcac cgcctggccg
      421 aacgcatagc atcgtttggg cgtcggttgg ttgggcggat agtaggtgtt gaccatcacc
      481 ggcaccatcg gcagcttggt ccccggcagg atgcgccggt agagaaaact aaacgcatga
      541 ccgacgccga tctcggcgcg cagcttgttg cagcgcgtga tgtcaaactc cgcttcggtc
      601 aacgcgcgaa tcaaatgctc ggccaaatcg ctcgccgtgt catactccgg cgcggtttcc
      661 gcccaaccct gctcttcggc atctttccat gccgcgggcc gcaaattgtt gtgcttcacc
      721 accggcaagc ccttgccgtg gtaaatcgcg aacatcggca tgttgtcatc gtggaactgc
      781 tcctgctgat cgtcgccgaa gaccaccacg agatcggcgc gcgccgcgct caacgcatcg
      841 cccaaagttt tgaccgcctt caggcaagct tcgtctcgtt ccttgaactt agcttcagtc
      901 aattccgctt ctaagcccgg tttggccgtc tgcagcaagg cctgatagtt gagccgtgga
      961 tcggttttgt ccttgtcacc aagcaatttc gcccagtctt tcgcccggat gctcaactgc
     1021 ggactatgcg aagtgccgat accgataacg atctctgcca taagttttcc tccatcaccc
     1081 aaaccggttg ggaaatgttc agtatgtgaa atggtctaca agcaaagttc tacccctgtc
     1141 aagcaagcac cgcatcatgc ggcggatcag ttagacctag atctcccact tcgttcgaga
     1201 tgacaatcga ctagtctgtt gtcatttcga gcgaagcgag aaatctactc aacgcactgc
     1261 cgcaaaggcc ttgcgaaact gcacaatgac gccggctcgt aactaataag cgagtttaac
     1321 ttgattgccg catcgtagca cgcaaatctc acggcctgca tttcccagct tgacgagcgt
     1381 ggcgcgcttg ccgtaacgtc cggcaacact agggaggtga ttcatggcta ccagccgagg
     1441 cgcgacatta ttgggaccgg ataaattgga aattagagaa tatcccatcc ccgacattcc
     1501 cgccgatggc ggcctggtca aagtcgaaat gggcggtgtc tgcggttccg acttcaagta
     1561 tctgcatggc ggcaaaaacg gcttgcccta tccgctcatt ctcggccacg agattttggg
     1621 ccgggtcgaa aaactcggca aggaagcagc ggcgatccac ggcatcgaag aaggcgaccg
     1681 gatcatcatg aaaggcgcta aaggctgcgg ccgctgcgcc cactgccggc gcggcgccgc
     1741 gcgcttttgc aaagcgcgca tcggctacgg cggccaaact acctgcgcca acccgcctca
     1801 cctcttcggc gccccggccg tttaatctgg accggcgcgc ggtaacttta ttggatcggg
     1861 cgaagacgca aaatggcgat acacggagta tgcaagttcg tacggaatcg aggtgaagcg
     1921 tggttacgag tttgacgcat gtcgccgtcg cgacggccgc gttgctggtg ctggtttgga
     1981 tcctgcggcg cgtcaaaact tggctgctca accggttgg
//
LOCUS       DATIRS010001171         2852 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_481844, whole genome shotgun sequence.
ACCESSION   DATIRS010001171 DATIRS010000000
VERSION     DATIRS010001171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2852
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_481844"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1837)
                     /locus_tag="VLM90_14985"
     CDS             complement(<1..1837)
                     /locus_tag="VLM90_14985"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSQ14333.1"
                     /translation="MAQQQKIEKPRAEWGSDVIVDALKAFEIEYIAINPGATFRGLHD
                     SLVNYGGNHAPEIILCNHEEIAVALAHGYARATGRPMAAAVHNVVGLQHASMAIYNAW
                     ADRLPVIVLGGTGPMDSANRRPWIDWVHTANVQGNLVRDFCKWDDQPASVEAVADSFI
                     RGYRLATTDPMGPVYICYDGDVQEKKLGSELTFPSLARYPAPLPLQAPEQGFAKTIEM
                     ILAAKRPVILADWVGRREAGFNALGELAELLAAPVLDQLGRFNFPVLHPLNLTGQADK
                     VMPQADLILAFDVPDLEGATVRRAQELGNRKATPLLPADAKVINVALDDLLVRAWATD
                     LNKLRQADLMILADTAVFLPELLRRLKAEKKLADSTDDIAKRRADWGKIYEAKRAALE
                     NELKAKWDDKPVSMTRIYAEIAEALKGEDWVLTNGSSQGKENLYLPATKFNQILGKYK
                     GGGLGYGMPASLGAALAHKGSGKFCINIQPDGDLLFTVSSIWTAVHHQIPLLSIVCSN
                     RSYFNDEEHQERIAIQRSRPVENKTIGIRIEDPNVDFAGLARNYGCWGAGPITEPKDL
                     IKTLRDAVKVVKSGKPALVDVVCQLRGVDRSESRQGRACQSVANRL"
     gene            complement(1903..2520)
                     /locus_tag="VLM90_14990"
     CDS             complement(1903..2520)
                     /locus_tag="VLM90_14990"
                     /inference="COORDINATES: protein motif:HMM:NF014816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HSQ14334.1"
                     /translation="MIQLYTWGTPNGKKVSIMLEEVGLPFEVHAINIGQNDQFKPEYL
                     AINPNNKIPAILDPDGPGGKPLKLFESGAILMYLAEKSGKLWPADLAQRYTVIQWLMF
                     QMGGVGPMFGQANYFFRLEEKVPYAIERFHKEAKRLYNVLNQELGQREYLAGAYSIAD
                     IATYPWVWRHDGHHVTLEEYPNVKRWYEQIGQRPAVQRGMEIPKK"
     gene            complement(2524..>2852)
                     /locus_tag="VLM90_14995"
     CDS             complement(2524..>2852)
                     /locus_tag="VLM90_14995"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ14335.1"
                     /translation="ALHDTSSPWLLYSYAVCYGLGQGSRALVLSAISADIFHGRHFGA
                     IFGYFTFSIGLGGAIGAWLGGFLFDLTHSYSMPFWVSLACLIVSVFVVWASGRVVNNQ
                     HAMERK"
BASE COUNT          603 a          845 c          794 g          610 t
ORIGIN      
        1 tcaatcggtt ggcaaccgat tgacacgctc gcccttgccg gctttccgaa cggtcaactc
       61 cgcgcagttg gcacaccacg tcgaccagcg ccggtttgcc gctttttact actttcaccg
      121 cgtcgcgcaa tgtcttaatc aaatccttcg gctcggtgat cggaccggcg ccccagcagc
      181 cgtaattgcg cgccaaacca gcgaagtcga cgttggggtc ttcgatgcgg atgccgatgg
      241 tcttgttttc caccgggcgg ctgcgctgga tagcgatgcg ctcctgatgc tcttcgtcgt
      301 tgaagtaaga tcgattgctg cacacgatac tgagcaaggg aatctgatga tgcactgcgg
      361 tccagatcga actcacggtg aataatagat cgccgtcggg ctgaatattg atgcaaaact
      421 tgcccgagcc cttatgcgcc agcgccgcgc ccagtgacgc cggcatgccg tagcccaagc
      481 cgccgccctt gtacttgccc aagatctgat tgaacttggt tgccggcaaa taaagatttt
      541 ccttgccctg ggagctgcca ttggtcagca cccaatcctc gcctttgagc gcttcggcga
      601 tctcggcgta gatgcgcgtc atcgacaccg gcttgtcatc ccacttggct tttaattcgt
      661 tttccagcgc agcgcgcttc gcttcgtaga tcttgcccca atcggcgcgc cgcttggcaa
      721 tgtcgtcggt tgaatcggcg agcttttttt cagccttaag ccggcgcaag agttccggca
      781 ggaaaaccgc cgtgtcggcg aggatcatca gatccgcttg gcgcaattta tttaaatcgg
      841 ttgcccaggc gcgcaccagc agatcgtcga gagcgacgtt gataactttg gcgtcagccg
      901 gcaagagcgg cgtcgccttg cggttgccga gctcctgggc acggcgcacg gtggcgcctt
      961 cgaggtcagg aacatcgaaa gctaaaatca gatctgcctg cggcatcact ttgtccgctt
     1021 gaccggtcaa attgagcgga tgcagcacag ggaaattaaa ccgccccaac tgatcgagca
     1081 ccggcgcggc gagcagctcg gccaactcgc cgagggcgtt gaaaccggcc tcgcgccgcc
     1141 ccacccagtc agccaagatc accggccgct tggccgcaag aatcatctca atggtttttg
     1201 cgaagccttg ttccggcgct tgcagcggca gcggcgcggg atatcgagcc agcgacggaa
     1261 aggttaattc gctgcctaat tttttttcct ggacatcgcc gtcatagcag atgtacaccg
     1321 gccccatcgg gtctgtggtc gccagccgat agccgcggat gaatgaatcg gccaccgcct
     1381 ctacgctcgc cggctgatcg tcccacttgc agaaatcgcg aaccagattg ccttgcacgt
     1441 tggcggtatg cacccagtcg atccaggggc ggcggttagc cgaatccatt ggacccgtgc
     1501 cgcccaggac gatgaccggc agccggtcag cccaggcgtt ataaatcgcc atcgacgcat
     1561 gctgcagacc gacgacgtta tgcaccgcgg cggccatcgg cctgcctgtg gcgcgcgcgt
     1621 agccgtgagc caacgccacg gcgatctctt catgattgca aagtatgatc tccggcgcat
     1681 gattgccgcc gtagttaact agcgagtcgt gcaggccacg gaaggtcgct cccggattga
     1741 tcgcgatata ttcaatctcg aaggctttga gcgcatcgac gatgacatcc gagccccatt
     1801 cagcgcgcgg cttctcgatt ttctgctgct gagccatggc attatccttt cagtcgcgca
     1861 gttccaaacc acgaacagga accacgaaca ggatcagctt atttacttct tcggaatttc
     1921 catgccgcgc tgcaccgccg gtcgttggcc gatctgctcg taccagcgct tcacattggg
     1981 atactcttcc aacgtcacat ggtggccatc gtgccgccac acccaagggt aggtcgcgat
     2041 atcggcaatc gaatatgcgc cggcgagata ttcacgctgg ccgagttcct gattgagcac
     2101 gttgtaaagc cgcttggctt ccttgtgaaa acgctcaatg gcgtagggga ctttttcttc
     2161 cagacgaaag aaataattcg cctggccgaa catcggtccg accccgccca tctgaaacat
     2221 cagccattga atcacggtat agcgctgcgc caggtcggcg ggccagagct tgccggattt
     2281 ttccgcgaga tacatgagga tggcgccgga ttcgaaaagc ttgagcggct tgccaccggg
     2341 gccgtccgga tcgaggatcg ccgggatctt gttattggga ttgatcgcca agtattccgg
     2401 tttgaactga tcgttctggc cgatattgat agcgtggact tcaaacggca gcccaacctc
     2461 ttccaacata atcgaaacct ttttgccgtt gggtgtgccc cacgtgtaga gttgaatcat
     2521 gacttatttc ctttccatgg catgttgatt attgacgacg cggccgctgg cccaaacgac
     2581 aaataccgaa acgattaggc atgcaagcga aacccaaaag ggcattgaat agctatgcgt
     2641 gaggtcgaag aggaaaccgc cgagccaggc gccaatggcg ccgccaaggc cgatgctaaa
     2701 agtaaagtag ccgaatatcg cgccaaaatg tcgaccgtga aaaatgtcgg cggaaatcgc
     2761 cgacaaaacc agggcacgcg agccttgtcc cagtccgtaa caaactgcat agctgtacag
     2821 cagccagggc gatgacgtgt cgtgcagcgc ga
//
LOCUS       DATIRS010001172         2563 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1170558, whole genome shotgun sequence.
ACCESSION   DATIRS010001172 DATIRS010000000
VERSION     DATIRS010001172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2563
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1170558"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2270
                     /locus_tag="VLM90_15000"
     CDS             <1..2270
                     /locus_tag="VLM90_15000"
                     /inference="COORDINATES: protein motif:HMM:NF015177.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14336.1"
                     /translation="LYKYPQEEFPYWRLVEENRRRGKGDPEFELIDTGIFDNNHYFDV
                     VIEYAKAGTDDILIRIEATNRGTEAAPLHLLPTVWFRNTWSWGLDARKPRLNREEAAE
                     VTAIKLNQNYYGNRWLYCEGRPELLFTENETNAQRIYGLENDAAYVKDGINEYVVQGA
                     KQAVNPAATGTKAAAHYQMTVAPGQTIAVRLRLSDGGPAKLDPFDGKFEESFTQRRDE
                     ADEFYATVIPDGAPADRKNVMRQALGGLLWSKQFYYYDVNRWIKGDPGSADPPKERAA
                     GRNHEWRHLYNADVISMPDKWEYPWYAAWDLAFHCVALAIVDSAFAKEQLLLMTREWY
                     MHPNGQLPAYEWAFGDVNPPVHAWAAWRVYKVEMKRRGEGDRKFLERIFQKLMLNFTW
                     WVNRKDAGGRNVFQGGFLGLDNIGVFDRSAPLPTGGHIEQSDGTSWMGMYCLNMLAIA
                     LELAKDNPAYEDVASKFFEHFVYICSAMNNLGGENIELWDAKDGFFYDVLSLPNGQRS
                     HLKVRSLVGLIPLFAVETLDPTVVDKLPGFKRRMQWFNENRPELSDHIETQSTDDGPR
                     RFLSLVNRHRLKRVLHYLLDENEFLSPYGIRAVSRYHRDHPYTLKANGMDYRVDYEPA
                     ESTTGLFGGNSNWRGPIWFPVNYLLIESLQKFHFFLGDNFKVECPTSSGNKMNLWEIA
                     GELSQRLTRIFTEDQNGHRPVFGGTEKFRNDPCWRDLIPFHEYFHGDNGAGIGASHQT
                     GWTALIAKLIQQYGE"
BASE COUNT          567 a          786 c          708 g          502 t
ORIGIN      
        1 tcctctacaa gtacccgcaa gaagaatttc cttactggcg gttggtcgaa gaaaaccgcc
       61 ggcgcggcaa aggcgatccg gagttcgaac tcatcgacac cggcatcttc gacaacaacc
      121 actatttcga cgtagtcatc gaatacgcca aggccggcac tgacgatatc ttgatccgca
      181 tcgaggccac caatcgtggc acggaggccg cgccgttgca cctcttgccg actgtctggt
      241 tccgcaacac gtggtcctgg ggcttggacg cgcgcaagcc cagactcaac cgcgaggaag
      301 ccgccgaagt cacggcgatc aagctcaatc aaaactacta tggcaaccgt tggctctact
      361 gcgaaggcag gcccgagttg ctgttcaccg agaacgaaac caatgcgcag cgtatctatg
      421 gtttggaaaa cgacgcggct tacgtaaaag acggcatcaa cgaatatgtc gttcagggcg
      481 ccaaacaggc ggtcaatccg gcagcgaccg gcaccaaggc cgcggcgcat tatcagatga
      541 ccgtcgcgcc tggccagact atcgcggtgc gattgcgcct gagcgacggc ggccccgcca
      601 aacttgaccc attcgacggc aagttcgaag aatcattcac gcaacggcga gatgaagcgg
      661 atgagtttta cgccacggtg attcccgatg gcgcgcccgc ggaccgcaag aacgtcatgc
      721 gccaagcctt gggcggactg ttgtggagca aacagtttta ctactacgac gtcaatcgtt
      781 ggatcaaagg tgatccaggc agcgccgatc cgcccaagga gcgcgcggcc ggccgcaatc
      841 acgagtggcg ccacctctac aacgcggatg tcatctcgat gcccgacaag tgggagtatc
      901 cctggtacgc agcttgggat ctggcttttc attgcgtcgc cctggcgatc gtcgactcgg
      961 ccttcgccaa ggagcaatta ttgctcatga cccgcgagtg gtacatgcat cccaacggcc
     1021 agctgcctgc ctacgagtgg gcctttggcg atgtcaatcc gccggtccac gcctgggccg
     1081 cctggcgtgt ctataaagtc gagatgaaac ggcgcggcga aggcgaccgc aagtttcttg
     1141 agcggatttt tcagaagctc atgctcaatt tcacctggtg ggtcaaccgc aaggacgccg
     1201 gcggcagaaa cgttttccag ggtggcttct tgggcctcga caacatcggc gttttcgacc
     1261 gcagcgcgcc gctgcccacc ggcggacaca tcgagcagtc cgacggcact agctggatgg
     1321 gcatgtattg tctcaacatg ctggcaatcg cattggaatt ggccaaggac aaccccgcct
     1381 acgaagatgt cgcgagcaag ttcttcgagc attttgtcta catctgcagc gccatgaaca
     1441 acctcggcgg cgagaacatc gagctctggg acgccaaaga cggatttttc tacgatgtct
     1501 tgtcgctgcc gaacggacaa cggtcgcact tgaaagtccg ctccctggtg ggcctgattc
     1561 cgctattcgc cgtggaaact ttggacccga ccgtggtcga caaattgccg ggcttcaaac
     1621 ggcgcatgca atggttcaac gagaaccgcc cggagttgag cgaccatatt gaaacccaat
     1681 cgacggatga cggtccgcgc cgttttctct ccctggtcaa ccggcatcgt ctgaagcgcg
     1741 tgctccatta cctgttggat gagaatgaat tcctgtcgcc ctacggcatc cgcgccgtct
     1801 cgcgctacca tcgcgaccac ccatacacgc tcaaagccaa cggcatggac taccgcgtcg
     1861 actacgagcc ggcggaatcg accaccggtc tgttcggcgg caactccaac tggcgcggcc
     1921 cgatctggtt cccggtcaat tatttactca tcgagtcgct gcagaaattt catttttttc
     1981 tcggcgacaa cttcaaagtc gaatgtccga ccagttcggg caacaagatg aatctctggg
     2041 agatcgccgg tgagttatca caacgcttga cgcgtatttt cactgaagat caaaacggcc
     2101 accgcccggt gttcggcggc acggaaaaat tccggaacga cccctgttgg cgcgacctga
     2161 tcccgttcca cgaatacttc cacggcgaca acggcgccgg catcggcgcc agccatcaga
     2221 ccggctggac ggcgctgatc gcgaaactga ttcagcagta tggcgagtga gcgagcggtt
     2281 aacagttagc ggtcatcagt caccggcctt cgagccgtga cggattactg acaactaatg
     2341 actgatcact gcacactgag caacggcaac taacaactcg ccccatggca gcctcagaaa
     2401 ccgatcgcca aaagatcctc ctcctcgccc tcgccctcgg tgtgaccacg atggcgttca
     2461 ttgtcgccaa gaccgggcgg gatgcgctct tttttcaggg ccaagggatc ttccaactgc
     2521 cggtggcgac cctcatgatt acggcagctt cattgcccct cgc
//
LOCUS       DATIRS010001173         1534 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1858380, whole genome shotgun sequence.
ACCESSION   DATIRS010001173 DATIRS010000000
VERSION     DATIRS010001173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1534
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1858380"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..341
                     /gene="rbfA"
                     /locus_tag="VLM90_15005"
     CDS             <1..341
                     /gene="rbfA"
                     /locus_tag="VLM90_15005"
                     /inference="COORDINATES: protein motif:HMM:TIGR00082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HSQ14337.1"
                     /translation="SDRVGDLLLEVTSELLRREIRDPRVRDVALTAVKMSKDLRHARI
                     YFNLLGGGSANHDDAAAGLKSASGFIRTKAAKQLNLRFVPNIEFTYDESADEAQRIDA
                     LLKQVNKTED"
     gene            425..1327
                     /gene="truB"
                     /locus_tag="VLM90_15010"
     CDS             425..1327
                     /gene="truB"
                     /locus_tag="VLM90_15010"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: protein motif:HMM:TIGR00431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HSQ14338.1"
                     /translation="MTYIQSGLLLIDKPEGPSSAHVVHRVKKILGAKRVGHLGTLDPF
                     ASGLLPIGVNEGTKIADIFLGGAKSYRAVMVLGVATDSQDATGKVIDERPVPVLADSD
                     LRRLEEKFTGAQTQVPPMFSALKKDGVRLYELARQGQEIERAPRSIQVDGLKLRRLSD
                     TEIEFEVTCSRGTYVRTLAADMGTELGCGAHLIKLRRLACDHLSLAQATTIDQLEVSM
                     ASGVVPLVTLAKALSHLPAVVWDSRSIARLRQGQQEMLTQLTVPAHGASLLSILDQAG
                     ELVALVRWTEDLPGARWRLYRVFH"
BASE COUNT          320 a          417 c          466 g          331 t
ORIGIN      
        1 gttcagaccg cgtcggggat ttgcttttgg aggtgacctc ggagctgttg cgtcgcgaga
       61 tccgcgatcc acgggtccgc gacgttgctt tgacggcggt taaaatgtcc aaggatctgc
      121 gccatgcgcg catctatttc aatctgctcg ggggcggatc ggcaaaccat gacgatgccg
      181 cagcggggct caaaagcgcc agcggcttca ttcgtaccaa agcggccaag cagttgaatc
      241 tccgtttcgt cccgaacatc gagtttacct acgacgaatc cgccgatgaa gcgcagcgca
      301 tcgatgcgct gctcaagcag gtcaacaaga ctgaggacta gtttcgcggc cgcggcaaat
      361 taatcttcga tgctgggtac cttttcgcgg cgaatttctt gtcacagcgg gtggccgcga
      421 gatcatgact tatatccaaa gcggtctttt actgatcgat aaacccgaag gaccgtcgtc
      481 ggctcatgtg gttcatcgcg tcaaaaaaat actcggcgct aaacgggtcg gccatttggg
      541 gactctcgat ccgttcgcgt cgggcttgct gccgatcggc gtcaacgagg gcaccaagat
      601 cgccgatatt tttcttggcg gcgccaagag ctaccgcgcc gtcatggttt tgggagttgc
      661 cacggacagc caggacgcca ccgggaaagt gatcgatgag cggccggttc cggtcttggc
      721 ggatagcgat ttgcgccgtc tcgaagagaa atttaccggc gcgcaaaccc aagtgccgcc
      781 gatgttttcg gcgttaaaaa aagatggcgt gcgtttgtat gagctcgcca ggcaagggca
      841 agaaatcgag cgcgcgccgc ggtcgataca ggtcgatggg ctcaaattgc gccgtctcag
      901 cgatactgag atcgagttcg aggtgacttg ttcacgcggc acctacgtgc ggacattggc
      961 tgcggatatg gggacggaat taggttgcgg cgcccatctg atcaagcttc gccgcctggc
     1021 ctgcgaccat ctgtcgctgg cgcaagcaac gaccatcgac cagctggaag tttcgatggc
     1081 aagcggtgtc gtgccgctgg tcacgttggc gaaagccttg agccatctgc cggcggtggt
     1141 ttgggacagc cggtcgatcg cgcggttgcg ccaggggcag caggaaatgt taacgcaact
     1201 aacggttcca gctcacggcg catctctact gtcgattctc gatcaagccg gcgagctggt
     1261 tgcgctggtg cgatggaccg aggatttacc cggcgcccgc tggcgactgt accgggtttt
     1321 tcattgaagt tttggcgcgc cgacgggcac ggtttattga catcaaccgg gccaatcaga
     1381 taccctacga accctattga acgttaacga tatcgctgtc gtggacagcg gttgcgaggc
     1441 tgattcacaa acctcgccag cgcatttcgg aaaggaagca gctatcaccc atgagtaacg
     1501 ttactggaac ggtgccggca aattcacata ttca
//
LOCUS       DATIRS010001174         1858 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1465270, whole genome shotgun sequence.
ACCESSION   DATIRS010001174 DATIRS010000000
VERSION     DATIRS010001174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1858
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1465270"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1419)
                     /locus_tag="VLM90_15015"
     CDS             complement(<1..1419)
                     /locus_tag="VLM90_15015"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HSQ14339.1"
                     /translation="MSDANPATGALAGLRVLDLTGRMGGYCGLLLANLGAQVLLIEAP
                     GGDPMRREGPFQNTTPQRERSLSFAAYHTNKHGAVLNLEDAKDRQKFRELAADADVVI
                     EDKPFGYLDALWLGYAELQKINPALVLTSISGFGRTGPYREFKAPSIVAFAMGGLMNL
                     CGHPGRAPLMGPCDVAYHLGSVHAAFGTMAALFNQRATGVGDHVDISLQDVLAADPFL
                     RIISRYSVTAEVPERSGHSQSTTVAETYQCQDGYARIFVNQPEHWRRFVEWLGKPAEL
                     LDPKLENVQSRFALRSMIDRLVEARTLNYPVKKFFEEFQTNRLAAAPINPPSGYLLDD
                     QTKHRNYFVEVDHPELGKHRFPGNPYKFSASPWRISRGAPLLGANADKIPEEFISQSM
                     WREGVALATTANAAMRKPLEGIRVISFPTGIVGPALAGLLADQGAEVITIEASRVIRS
                     PQRGQRWQIAADLESNRERKRIA"
     gene            complement(1560..>1858)
                     /locus_tag="VLM90_15020"
     CDS             complement(1560..>1858)
                     /locus_tag="VLM90_15020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14340.1"
                     /translation="RSIAASFALSLEQPARALGFAITRKLYGLPADYWDGYAAKIAAV
                     TAADVQRVARKYLDPDKLQIAAVGDAGRIKAVLEKYGAVEVYDSNGAPLPPGKS"
BASE COUNT          381 a          554 c          559 g          364 t
ORIGIN      
        1 ggcgatgcgc ttacgctcgc ggttgctttc gagatccgcc gctatttgcc aacgctggcc
       61 ccgttgcggg ctgcggatga cacggctggc ttcgatggtg atcacctcag cgccctgatc
      121 ggccaggagc cccgccagcg ctggaccgac gattcccgtc gggaaactga ttacgcgaat
      181 accttcgaga ggtttgcgca tcgccgcatt cgcagtcgtc gctaacgcca cgccctcgcg
      241 ccacatggac tggctgataa attcctcggg aattttgtca gcgttggcgc cgagcagcgg
      301 tgcgccgcgc gagatacgcc agggactggc ggaaaactta tagggattgc cgggaaagcg
      361 atgcttgccc aactcggggt gatcgacttc gacaaaatag ttgcgatgtt tggtctggtc
      421 atcgagaagg taaccgctcg gcggattgat cggcgccgcg gctaaacgat tggtctgaaa
      481 ctcctcgaag aatttcttga ccggatagtt gagcgtgcgc gcttcgacca gacgatcgat
      541 catcgagcgc agcgcgaagc ggctctgaac attctccagt ttcggatcga ggagttccgc
      601 cggtttgccc aaccactcga cgaagcggcg ccaatgctcc ggctggttga cgaaaatgcg
      661 cgcgtagccg tcctggcatt gataggtttc cgccacggta gtggactggc tatggccgct
      721 gcgctccggc acttccgcgg taacgctgta tctagaaata atgcgcaaaa acggatcggc
      781 ggccaagaca tcttgcagcg atatatcgac atgatcgccg acacccgtgg cgcgctggtt
      841 gaacagcgcg gccatggtgc cgaaggctgc atgcaccgat cccaaatgat acgccacatc
      901 gcacggaccc atgagcgggg cgcggcccgg atggccgcac agattcatca gtccgcccat
      961 ggcgaaggcg acaatgctcg gcgccttgaa ttctcgatag ggtccggtgc ggccaaagcc
     1021 gctgatcgac gtcagcacca gcgccgggtt gatcttttgc agctcagcgt agccgagcca
     1081 taaagcgtcg agatatccaa acggtttgtc ttcgatcacc acatcggcat cggccgccaa
     1141 ctcacgaaat ttttgcctgt ccttggcgtc ttcaagattc aaaaccgcgc catgcttgtt
     1201 ggtatgataa gcggcgaagg ataagctgcg ttcgcgttgg ggcgtggtat tttggaacgg
     1261 cccttcgcgg cgcatgggat cgccgccggg cgcttcgatg agcaatactt gggcgccaag
     1321 attggccagc agtaagccgc aatagccgcc catgcggccg gtcaggtcga ggacacgcag
     1381 gccggccaag gcgccggtgg ctggattggc atcagacatc gagaagctcc attctaaagt
     1441 gcgtcttcgc tcaagctctc ggagtatatt taaagttgcc gctaggaaac aagacgccaa
     1501 cagattcgcc ctggacaatt cgctggcgtt gccgacgaag atgaaattgg ccgcgccggc
     1561 taagacttgc caggcggcaa cggcgcaccg ttgctgtcgt aaacttccac cgcgccgtat
     1621 ttttccaaaa ccgctttgat cctgccggca tcgccgacgg cggcgatctg aagcttgtcg
     1681 ggatcgagat acttgcgcgc cacccgctgc acatccgccg ccgtcaccgc ggcgatcttg
     1741 gcggcataac catcccaata atcggccggc aagccgtaca gcttacgcgt gatggcaaag
     1801 cccaacgcgc gcgccggttg ctccaaggac agcgcgaagc tggcggcgat cgaacgct
//
LOCUS       DATIRS010001175         2093 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_285034, whole genome shotgun sequence.
ACCESSION   DATIRS010001175 DATIRS010000000
VERSION     DATIRS010001175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2093)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2093)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2093
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_285034"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..527)
                     /locus_tag="VLM90_15025"
     CDS             complement(<1..527)
                     /locus_tag="VLM90_15025"
                     /inference="COORDINATES: protein motif:HMM:NF014973.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrile hydratase subunit alpha"
                     /protein_id="HSQ14341.1"
                     /translation="MSDDHGHDHPKHELSYYAKRIYAMRELLVEKGVITEKDIQCQIE
                     YQEARTPANGANLVAKAWVDPAFKARFIDDPKAACAEIGIDATALNEFVVLENTPQVR
                     HMVVCTLCSCYPRPILGRPPDWYKSFNYRQRSVSDPRGVMREFGLELPADVEVRVHDS
                     TADIRYIVMPMRPAGT"
     gene            complement(537..830)
                     /locus_tag="VLM90_15030"
     CDS             complement(537..830)
                     /locus_tag="VLM90_15030"
                     /EC_number="4.2.1.84"
                     /inference="COORDINATES: protein motif:HMM:NF014289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018822 - nitrile hydratase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SH3-like domain-containing protein"
                     /protein_id="HSQ14342.1"
                     /translation="MTSATGRFRTGDRVKVKFEDRPGHLRTPWYIRGKSGWIERVYGD
                     FLNPELLAFGKDGMPKKTLYLVAFEYSEVFGKSLGPKDKVLVDIYDHWLDRQA"
     gene            complement(827..1138)
                     /locus_tag="VLM90_15035"
     CDS             complement(827..1138)
                     /locus_tag="VLM90_15035"
                     /inference="COORDINATES: protein motif:HMM:NF045268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14343.1"
                     /translation="MARGHHDVGGLPGAGAIEVTEHPLSDWEILADAVNQALGARGIK
                     RTDEMRRAREEMDSAAYRDMTYYERWIASIEAILIEKNILSKAEIDQKLAEFESTWGE
                     P"
     gene            complement(1153..>2093)
                     /locus_tag="VLM90_15040"
     CDS             complement(1153..>2093)
                     /locus_tag="VLM90_15040"
                     /inference="COORDINATES: protein motif:HMM:NF013019.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (GTP)"
                     /protein_id="HSQ14344.1"
                     /translation="VGDDISWLRVGSDGRLWAINPEAGFFGVAPGTGSNTNPNAVKTV
                     KKDTIFTNVALRDDGTVWWEGHDDPVPANAQDWRGKPWDPEGGTPAAHPNARFTVSIK
                     QCPTYSPEWEKPEGVPISVILFGARRQKLIPLVYQSFNWQHGTCLGATLASETTAAAT
                     GAVGVVRRDPMAMLPFCGYNMGDYWAHWLAMGKKATNPPKIFRVNWFQRNERGRFLWP
                     GFGENLRVLRWVVERSKGGGAADETPIGFVPRASSLTGDGLDVAKADVDQLVSVDRAA
                     WKNNLKSQSDFFDTFGDHLPAGMKEEHGALANRLKG"
BASE COUNT          412 a          634 c          601 g          446 t
ORIGIN      
        1 gtgccagcgg gacgcatcgg catgacgata taacgtatgt cggcggtgct atcatgcacc
       61 cgtacttcga catcagccgg caactccaag ccgaactcgc gcatgacgcc gcgcgggtcc
      121 gacaccgagc gctggcggta gttaaaactc ttgtaccaat cgggcggacg gcccagtatc
      181 ggccgcgggt agcaggaaca taaggtacag accaccatgt ggcgcacttg cggcgtgttt
      241 tccaagacaa cgaactcgtt gagcgccgtg gcgtcgatgc cgatctcggc acaggccgct
      301 ttgggatcgt cgataaagcg cgctttgaac gccggatcga cccaggcttt ggcgaccaga
      361 ttggcgccat tggcgggagt gcgcgcctcc tggtactcga tttggcactg aatatctttc
      421 tcagtgataa cgcccttctc aaccaacagt tcacgcatgg cataaatccg tttggcgtag
      481 taactcaatt catgcttggg atgatcatgt ccatggtcgt cgctcataaa atctccttaa
      541 gcctgtcgat cgagccagtg atcgtagata tcgacgagga ctttgtcttt cggaccgagt
      601 gacttgccga atacctcact gtactcgaag gcgaccagat aaagcgtctt cttgggcatg
      661 ccgtccttgc cgaaggcgag aagttcggga ttgagaaagt cgccgtaaac ccgttcgatc
      721 caaccgctct tgccgcggat gtaccaggga gtgcgcagat ggccgggacg atcttcgaat
      781 ttaactttga cccgatcgcc ggtgcgaaac ctgccggtgg cggaagtcac ggctcgcccc
      841 acgtggattc gaactcggcg agcttttggt cgatctctgc tttgctgaga atattttttt
      901 cgatgaggat cgcctcgata ctggcgatcc aacgctcgta gtaagtcatg tcgcggtaag
      961 ccgcggagtc catctcctcg cgagcccggc gcatctcatc ggtgcgcttg atgccgcgcg
     1021 cgccgagcgc ttggttgacc gcgtcggcga gtatttccca atcggacagt ggatgctcag
     1081 taacttcgat ggctcccgct ccagggagcc cgccgacatc gtgatgccca cgcgccataa
     1141 aactctcctc ggttatcctt tgagacggtt ggcgagcgcg ccatgctctt ccttcatacc
     1201 cgccggcaga tgatcgccga aagtgtcgaa gaaatcactc tggcttttta aattattttt
     1261 ccaggcagcg cgatccaccg acaccagttg atcgacatcg gctttggcaa catccagccc
     1321 atcgccggtt aggctcgatg ccctgggcac aaagccgatc ggtgtttcat cggccgcgcc
     1381 gccgcccttg gagcgctcga ccacccagcg cagcacgcgg agattttcgc cgaatcccgg
     1441 ccagagaaag cggccccgtt cgttacgctg gaaccaattg acgcggaaaa ttttcggcgg
     1501 gttggtcgcc tttttgccca tcgccaacca gtgcgcccaa taatcgccca tgttgtagcc
     1561 gcaaaacggc agcatcgcca tcggatcgcg ccgcaccaca ccgacggcgc cagtcgctgc
     1621 tgcggtggtc tcggaggcca aggtcgcgcc gagacaggtg ccatgctgcc aattgaagga
     1681 ttggtagact aaaggaatga gtttctgccg gcgcgccccg aaaagaatca cgctgatcgg
     1741 cacgccttcg ggcttttccc actccggcga ataggtggga cactgtttga tcgatactgt
     1801 aaagcgtgcg ttagggtgtg ctgccggggt gccgccctcg gggtcccagg gcttgccgcg
     1861 ccaatcttgc gcgttggccg gcaccggatc gtcgtggcct tcccaccaca ccgtgccgtc
     1921 gtcgcgcagc gccacgttag tgaaaatggt gtccttctta accgtcttca cggcgttggg
     1981 gttggtattc gagccagtcc ccggcgcgac gccgaaaaat cccgcctctg gattgatcgc
     2041 ccagagtcgg ccgtcggagc caacccgcaa ccaagagata tcgtcgccga ctg
//
LOCUS       DATIRS010001176         1665 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1072666, whole genome shotgun sequence.
ACCESSION   DATIRS010001176 DATIRS010000000
VERSION     DATIRS010001176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1665
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1072666"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..386)
                     /locus_tag="VLM90_15045"
     CDS             complement(<1..386)
                     /locus_tag="VLM90_15045"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14345.1"
                     /translation="MKELAKIRNDVVGSLLRPAKLKDARNRYDDGKLTLEQLREIENE
                     AIREAVRLQESLGLSVVTDGEYRRLNFQDSFGESVSGYDAGKPSLKFYESRVAGSSPL
                     RRWEIPDQGEQKGTAVAQRRPVVARLG"
     gene            complement(398..1120)
                     /locus_tag="VLM90_15050"
     CDS             complement(398..1120)
                     /locus_tag="VLM90_15050"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing M23
                     family metallopeptidase"
                     /protein_id="HSQ14346.1"
                     /translation="MLCVLAGAGCSSLKSPAPAPPPRPASNIFHVVKPGENLFRIGKA
                     YDVSFEELAKANRLKDASQIYVGQRLLIPGANRQLPVDTIAPAEAAPVSRMPPPAAEV
                     NGDLLLWPVSGTINSSYGPRGSSFHDGIDIAAPEGTPILAIERGEVIYSDQLRGYGNI
                     VILRHQGGMVSVYAHNQVNLVREGQQVGKGEVIAKVGSTGRVTGPHLHLEIRKNNMAQ
                     DPLRYLPQLCCMQASDNVAPKD"
     gene            complement(1234..>1665)
                     /locus_tag="VLM90_15055"
     CDS             complement(1234..>1665)
                     /locus_tag="VLM90_15055"
                     /inference="COORDINATES: protein motif:HMM:NF013315.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14347.1"
                     /translation="EALRLAGDEKVLEIGTGSGYQTALLAELCFNVFSVEKIRALSRR
                     ARLLLDQLDYHNIALHVGDGTIGWSDHAPYHAIIVTAGAPQVPQPLLDQLAVGGRLVI
                     PIGDEQGQSLMRLTRTRTSFKKEQLGECKFVKLIGKYGWRE"
BASE COUNT          355 a          517 c          444 g          349 t
ORIGIN      
        1 ccaagcctcg ctaccaccgg ccggcgctgc gccaccgcgg tccctttctg ctccccctgg
       61 tcgggaatct cccaccggcg caacggactg cttccagcca cccggctttc gtaaaatttc
      121 aaactcggct tgccggcatc atagcccgac accgattcgc cgaaactgtc ttgaaagttg
      181 agccggcgat attcgccatc ggtgaccacc gataggccga gcgattcttg caacctgacc
      241 gcttcgcgaa tcgcctcatt ttcaatttcg cgcaactgtt cgagcgtcaa cttgccatcg
      301 tcgtaacgat tgcgcgcatc cttcagcttc gccggccgca acaaactgcc gacgacatcg
      361 ttgcgaatct tggctaattc tttcatgatc gaaacctcta gtctttcggc gccacgttat
      421 cggaagcctg catgcagcac aactgcggca aataacgcag cggatcttgc gccatattgt
      481 tcttgcgaat ttccagatgc agatgcggcc cggtgacccg ccccgtgctg ccgaccttgg
      541 caatcacctc gcccttgccg acctgctggc cttcgcgcac gagattgact tgattatgcg
      601 catacaccga aaccatgccg ccttgatggc gcaggatgac gatattgccg tagccgcgaa
      661 gctgatcgct atagatcacc tcgccgcgct cgatggccag gatcggagtc ccttccgggg
      721 ccgcgatatc gataccgtca tggaaactcg atccccgcgg tccatagctg gaattgattg
      781 ttccgctcac cggccaaagt aagagatcgc cgttaacttc cgcggccggc ggtggcatac
      841 gcgacacggg tgccgcctcc gccggagcga tggtgtccac cggcaattgc cggttagcac
      901 cagggatcaa gagcctctgg ccgacgtaga tttgactggc gtctttcaag cgattggctt
      961 tggccaattc ctcgaaggaa acgtcatagg ccttgccgat gcggaaaaga ttctcacccg
     1021 gtttgacgac gtgaaaaata ttcgacgccg gcctgggtgg cggtgctggc gcgggactct
     1081 tcagcgagga acaaccggca cccgcaagca cacaaagcac aacccagcag ggttgtatcc
     1141 ggaaaatcaa gggatttagg cgtccagaat ggactagctt aagacgcatg cgaaatcggt
     1201 cacgccggga tactgcgacc acagttttcg acgctattcg cgccagccgt acttgcctat
     1261 gagcttgacg aacttacatt cgcccaactg ctcttttttg aaactcgtgc gggtccgggt
     1321 caagcgcatt aggctctgcc cctgctcgtc gccgatcgga atcaccaatc ggccgccgac
     1381 ggcaagctga tcgagaagag gctggggcac ctgtggcgcc ccggcagtga caatgatcgc
     1441 gtggtacggc gcatggtcgg accaaccgat ggtgccatcg ccgacgtgga gcgcgatatt
     1501 gtgataatca agctgatcta agagcaaccg cgctcgccgc gacaaggctc taattttttc
     1561 tacggaaaat acgttgaagc atagttccgc caaaagtgcg gtttggtaac ctgaaccggt
     1621 accaatctca agcacctttt catcgccagc cagacgcagc gcctc
//
LOCUS       DATIRS010001177         2583 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_973564, whole genome shotgun sequence.
ACCESSION   DATIRS010001177 DATIRS010000000
VERSION     DATIRS010001177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2583
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_973564"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..685
                     /locus_tag="VLM90_15060"
     CDS             <1..685
                     /locus_tag="VLM90_15060"
                     /inference="COORDINATES: protein motif:HMM:NF021982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005576 - extracellular region [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PHB depolymerase family esterase"
                     /protein_id="HSQ14348.1"
                     /translation="TVYPNGTGRWSGRLLTWNGGTCCAYSVLNKIDDVGFVRALVHEL
                     AEKFPVDRRRVYATGMSNGGMMAHRLAVEASDVIAAVAPVAGGLVLPALKSDRAVPVM
                     HIHSIDDPRALYTGGLGPPFPMTKSQVFHPNVDAMIKRWVEQNRCAAEPTVVDRRVDR
                     SARGHRATKYDFANCRDGAEVALWKLTGAGHVWPGGKQKVLERILGPSTDIIDANREM
                     WEFFKRFTL"
     gene            793..1644
                     /gene="rfbD"
                     /locus_tag="VLM90_15065"
     CDS             793..1644
                     /gene="rfbD"
                     /locus_tag="VLM90_15065"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: protein motif:HMM:NF016228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008831 - dTDP-4-dehydrorhamnose reductase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HSQ14349.1"
                     /translation="MKMLITGAAGLVGSHLARRLAREHDVRALMHGDLDITDRAAVRR
                     CLLHEKPALVFNCAVLQVDESEQQPAKAEAVNVDGPRCLAEAANDVGAEIVHFSTQYA
                     FDGEPVGRLPYTLHDEPRPVNNYGRTKVAGEAAVLAACARSFIVRTSWVYGSGKKSFL
                     CTVHNDLKAGKRVRAIDDIWSSTTYVADLIERVMVIRSTGKYGTYHAVNDGICSYYEF
                     ALEAGRVLGLTRGQIDLLIEITHERDMKRVAARPRYTPLRCLLSEQLGLPPMRDWRAA
                     LAEYVRG"
     gene            1834..>2583
                     /locus_tag="VLM90_15070"
     CDS             1834..>2583
                     /locus_tag="VLM90_15070"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ14350.1"
                     /translation="MSNFPVIDTDGHVLERQSDIRKYLEEPWVKRSTGLWPGDQPWDN
                     DMMDGFEMARTWKGLSAAQQVDNWHKIMDEHGIEKAICFPTGSGNIAKNQEVPYQIAV
                     TRAANTQFAKEYNAHSDRLFCVGCLPMRSPKAAAEELRRAVTELGLKGFEILPTGLPL
                     ALGDPYYDPIYEEAERLGVVLGVHGTRNTSRELGTSGLSTFSEVHSYAFPVGIMLQFT
                     SIVCQGLPVRFPKLKLAFLEIGATWLPYYLDR"
BASE COUNT          526 a          745 c          772 g          540 t
ORIGIN      
        1 cacagtttat cccaacggca ccggccgatg gtccgggcga ttgctgacat ggaatggcgg
       61 cacttgctgc gcttactcgg tgctcaacaa aatcgacgac gtcgggtttg tccgggcgct
      121 agttcacgag ctcgccgaga agtttcctgt cgatcggcgc cgagtctacg ccaccggaat
      181 gtccaacggc ggcatgatgg cccatcgtct ggcggtggaa gcgagcgatg tcattgccgc
      241 agtagcgccg gtggcgggcg gcttggtgct gccggcgctc aaatccgacc gcgccgtgcc
      301 ggtgatgcat atccacagca tcgacgatcc gcgcgcgctt tataccggtg gcctcggtcc
      361 gccgttcccg atgaccaaga gccaggtttt tcatcccaat gttgacgcga tgatcaagcg
      421 ctgggtcgag caaaaccgtt gcgctgccga accgacagtc gttgaccggc gcgtcgatcg
      481 cagcgcgcgc ggccatcgcg caaccaaata cgattttgcc aactgccgcg acggcgcgga
      541 agtcgcgctc tggaagctca ccggcgcggg ccacgtgtgg cccggcggca agcagaaagt
      601 tctcgagcgc atcctcggtc catcgacgga tatcatcgat gccaaccggg agatgtggga
      661 gttttttaag cgcttcacgc tataaaaaag ttccaaaggt tccaaccgtg gcaaatgttc
      721 cagtagtcct catccagtca ttcacgctta acctcttgat gagttattac ccgcgtttta
      781 gagtcggcgg taatgaagat gttgatcacc ggcgctgcag ggttagtcgg cagccattta
      841 gcgcgccgtt tggcgcgtga acatgacgtg cgcgcgctca tgcatgggga tctcgatatt
      901 accgatcgcg ctgccgtgcg gcgttgccta cttcacgaaa aaccggcgtt ggtcttcaat
      961 tgcgccgtgc tgcaagtcga tgagtcggaa cagcagccgg cgaaagctga agccgtgaat
     1021 gtcgatgggc cgcgttgctt agccgaagcg gcgaatgacg ttggcgctga gatcgttcac
     1081 ttcagcacgc agtacgcgtt tgacggcgag ccggtggggc gcttgcctta cactcttcac
     1141 gacgagccac gaccggttaa caattacggc cggacaaaag ttgccggcga ggcggcggta
     1201 ctcgctgcgt gcgcgcgcag tttcatcgtg cgcacttctt gggtatacgg cagcggcaag
     1261 aagagttttc tttgcacggt tcacaacgac ctcaaggccg gcaagagagt tcgcgctatc
     1321 gatgacatct ggtcgagcac cacctacgtc gcggatctga tcgagcgggt gatggtcatt
     1381 cgctcgactg gcaagtatgg cacgtatcac gccgtcaacg acggcatctg ctcgtactac
     1441 gaatttgccc tcgaagcggg ccgcgtgctc ggactcactc gcgggcaaat cgatctactt
     1501 atagaaatca ctcatgagcg cgacatgaaa cgagtcgctg cacggccgcg ctacacgccg
     1561 ctgcgctgtt tgctttcgga acaactcggt ttgccgccga tgcgcgactg gcgggcagcg
     1621 ttggcagagt atgtcagggg atagttgaag tattggagta atggagtgtt gggtgaacgg
     1681 acttcggaat tcgaacttcg tcccaagtcc cgacttaatc cgacacccat gactccatca
     1741 ctccagcact tcaattcgcc tctcccggca ttgacagccg gcttggcgcc ggactagaag
     1801 aattaagtct gaactcgcga aggaggccat ttcatgtcga actttcctgt catcgatacc
     1861 gacggtcatg tgctcgaacg gcaatcggac atccgcaagt atctcgaaga gccctgggta
     1921 aaacggtcta ctggcttgtg gcccggcgat cagccctggg acaacgacat gatggatggc
     1981 ttcgagatgg cgcggacgtg gaagggtttg agcgcggcgc agcaggtcga caactggcac
     2041 aagatcatgg acgagcacgg catcgagaag gcgatctgct ttcccaccgg ttccggcaac
     2101 atcgccaaga accaggaagt gccctatcaa atcgccgtga cccgcgccgc caacacgcag
     2161 ttcgccaaag agtacaacgc gcattccgac cggctatttt gcgtcggctg cttgccgatg
     2221 cgctcgccga aagcggcggc cgaagaattg cgccgcgcgg tgacggagct gggcctcaaa
     2281 ggcttcgaga tattgccgac gggtttgccc ttggcgctgg gcgatccgta ttacgatccg
     2341 atctatgaag aagcggaacg gctcggagta gtgttgggcg tgcacggcac gcgcaatacc
     2401 tcgcgggaac tcggcacttc cgggctttca acattttccg aagttcattc ctatgccttt
     2461 cccgtcggta tcatgctgca gttcaccagt atcgtttgcc agggtctgcc ggtgcgcttt
     2521 ccgaagctaa aattagcgtt cctggaaatc ggcgccacct ggctgcccta ttatctcgac
     2581 cgg
//
LOCUS       DATIRS010001178         1943 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1269726, whole genome shotgun sequence.
ACCESSION   DATIRS010001178 DATIRS010000000
VERSION     DATIRS010001178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1943)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1943)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1943
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1269726"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..557)
                     /locus_tag="VLM90_15075"
     CDS             complement(<1..557)
                     /locus_tag="VLM90_15075"
                     /inference="COORDINATES: protein motif:HMM:NF013486.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family N-terminal
                     domain-containing protein"
                     /protein_id="HSQ14351.1"
                     /translation="MSELYPYPRFSLAERDRRWKAVREKMAEQNLDVIVTPQNTGHSM
                     DFQANTRYLTHCGGGGDADIAAVFPLNGAVTAIATSANPRWTTTQEWTTDVREARREY
                     GKIIVERLKELKVDNGRIGIAGLGEVEGTRTPEGTILHGTWQRIRDAFPNAQLTDATP
                     ILVEVRYIKSAEEIEVLTKSMAIVE"
     gene            complement(664..1251)
                     /locus_tag="VLM90_15080"
     CDS             complement(664..1251)
                     /locus_tag="VLM90_15080"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSQ14352.1"
                     /translation="MSDENINPDAPLHIRGLNHLTIPVKERYRAARFYIVALGAEAHH
                     ESAPDRVAKGLSRSLQFGIRMAANFEIDLFEQEFGQPDWNQSHPHLALDTSAEDLEKW
                     AEHFNKWQIPFVGPVTRSGTKGAEIYFNDPDGNHLEVHCSDVPEEMRSKYHVGPYDKS
                     LCVHKEEWPPKELSDEAERLFQASVTRMRARRKPH"
     gene            complement(1288..>1943)
                     /locus_tag="VLM90_15085"
     CDS             complement(1288..>1943)
                     /locus_tag="VLM90_15085"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HSQ14353.1"
                     /translation="EIIGHANEVLIQHAKVGVGENELVAEMLREIVRRGGEPITMMLF
                     GTGGPEVPWAQRVFTTRKLKAGDLINTEVEGKYAGYIAQALQPISLGPKPKELEKIFD
                     ATKVIFDRMLKFLKPGISFGAVAKFYQDEVAAAGYEPDGALMHGRGLGEDAPMLWGAR
                     KDFPEKDQLLKEGHVFILKPACKQGFMRDSIRAGDTVAIEANGARRLGKRELTFVAV"
BASE COUNT          353 a          546 c          576 g          468 t
ORIGIN      
        1 tcctcgacga tcgccatcga cttcgtcagt acttcgattt cttcagcgct cttgatgtag
       61 cgcacctcga ccaggatcgg cgtcgcgtcg gttaactgag cgttgggaaa ggcatcgcgg
      121 atacgttgcc aggtgccgtg caggatcgtt ccttcgggag tgcgcgtgcc ctcgacctct
      181 cctaggccgg cgatgccgat gcggccgtta tcgaccttta attctttaag ccgctcaaca
      241 atgatcttgc cgtattcgcg ccgcgcttcg cgaacatcgg ttgtccattc ttgcgtcgtc
      301 gtccagcgcg gattggccga ggtggcgatg gcggtgacag cgccattcaa cggaaacacc
      361 gcggcgatgt cggcgtcgcc gccgccgccg caatgggtca ggtagcgggt gttggcttga
      421 aagtccatgg aatggccggt gttctgcggc gtgacgatga catcgaggtt ctgctcggcc
      481 attttttcgc gcaccgcttt ccagcggcga tcacgttcgg cgagggagaa gcgcgggtag
      541 gggtagagct cggacatgga aactccgttc aagtcgttca aactgttcaa atcgttcaag
      601 ccgtcggaat cggacaaacc acgaaggttg cctgtagggg cgaaaaatct ttcgccccta
      661 ccattaatgc ggttttcggc gcgcgcgcat gcgtgtgacc gaggcttgga acagccgttc
      721 cgcttcgtct gataactctt tcggcggcca ttcttctttg tgcacgcaca ggctcttgtc
      781 gtaggggccg acgtggtact tgctgcgcat ctcttccggc acgtcggaac aatgaacttc
      841 caggtgattg ccgtcggggt cgttgaaata gatctccgcg cctttggttc ccgaacgggt
      901 caccgggccg acgaaaggaa tctgccattt attgaaatgc tcggcccatt tctccaaatc
      961 ttcggcagaa gtatcgagag ccagatgggg atgagactgg ttccagtccg gttggccaaa
     1021 ctcttgttcg aaaagatcga tctcgaaatt ggccgccatg cgtataccga attgtaacga
     1081 tcgcgataaa cccttggcga cacggtcggg agccgactcg tgatgcgcct cagcacccag
     1141 ggcgacgatg taaaagcgcg cggcgcgata acgctctttg acgggaatgg ttaaatgatt
     1201 caagccgcga atatgcagcg gcgcatcggg gttgatgttt tcatcgctca tggggatcct
     1261 ccgtttggga attaccgcat ttatttttta gaccgctacg aatgtcagct ctcgcttgcc
     1321 cagccgccgt gcgccgttgg cttctatcgc cacggtgtcg ccggcgcgga tggagtcgcg
     1381 catgaaaccc tgtttgcaag cgggcttcaa gatgaacaca tggccttctt tcaatagctg
     1441 atctttttcg gggaaatcct tgcgcgcgcc ccagagcatc ggcgcgtctt cgcccaaacc
     1501 acggccgtgc atgagggcgc cgtcgggttc gtagccggcg gcggcgactt cgtcctgata
     1561 aaacttcgcg accgcgccga agctgatgcc gggtttcagg aatttcaaca tgcggtcgaa
     1621 aatgaccttg gtggcgtcga agattttctc taattctttt ggctttggtc cgagggagat
     1681 cggttgcagt gcctgggcga tgtagccggc gtatttgcct tcgacttcgg tgttgatcaa
     1741 gtcgcctgct ttcagctttc ttgtcgtgaa cacccgctgt gcccatggca cttccggtcc
     1801 gccggtgccg aacagcatca tggtgatcgg ctcgccgccg cggcgcacga tttcgcggag
     1861 catttccgcg accagctcgt tttcgccaac gccgaccttg gcatgttgaa tcagcacttc
     1921 gttggcgtgg ccgatgatct cgg
//
LOCUS       DATIRS010001179         1851 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_973795, whole genome shotgun sequence.
ACCESSION   DATIRS010001179 DATIRS010000000
VERSION     DATIRS010001179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1851
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_973795"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..642
                     /locus_tag="VLM90_15090"
     CDS             <1..642
                     /locus_tag="VLM90_15090"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSQ14354.1"
                     /translation="KVDAIHRETRKKSEEWVKKTWDEKPISQARFFSEINKRVQGKAW
                     ALVSSHGRRWREVIEVTEPAHGMGGGRGGGVGYGLPSSIGSALGFKESGRLCVSILGD
                     GDFLMTSNALWTAAKYQIPLLVVVLNNRSYYNDEEHQERMARARQRPVENKGIGIRIE
                     EPAPDLAAIARALHVDAFGPVTEPGELGPTLDKAIAIVESGKPAVVDVITQPR"
     gene            652..840
                     /locus_tag="VLM90_15095"
     CDS             652..840
                     /locus_tag="VLM90_15095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14355.1"
                     /translation="MNKLIEENLMAVLKREGLEPKPGDLEQFTEIIELYMENLKQLHS
                     VNLGAEELGPVFRPEWKI"
     gene            885..>1851
                     /locus_tag="VLM90_15100"
     CDS             885..>1851
                     /locus_tag="VLM90_15100"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HSQ14356.1"
                     /translation="MAVAEKPLYYLSIHEAQQLIKDRNLSPVELTRAVLDRIAAVDGK
                     LHAYINLMADSAMQEARAAEAEIQKGNWRGPMHGIPIAVKDQLDVEGAPARVRQFTKG
                     VGDATAVRKLREAGAVMMGKLHMSSLPDAELPVPRNPWNTEHITGGSSTGSGAAVAGG
                     LCLGSLGEDTAGSIRNPSAFCGLAGLKGTYGRVSRHGLAPLSWSLDHCGPMARVVEDL
                     AHMLNAIAGHDPKDPTSSSMPLMDYTRALREDVKGMVIGVPRDYIDECAPRTAPIVLK
                     RVDQAIDELKSLGARVEEIKVPTLHLATIANAVIYYNEFWAAHKSD"
BASE COUNT          393 a          507 c          627 g          324 t
ORIGIN      
        1 aaagtcgacg cgattcatcg cgagacgcga aagaagagcg aggaatgggt caaaaaaacc
       61 tgggatgaaa agccgatctc gcaagcgcgc ttcttcagcg agatcaacaa gcgcgtgcaa
      121 gggaaggcgt gggcgctggt ctcgtcgcat gggcggcgct ggcgcgaagt catcgaagtc
      181 accgagccgg cgcacggcat gggcggcggc cgcggcgggg gcgtcggtta cggtttgcct
      241 tcgtccatcg gctcggccct gggtttcaag gaaagcggcc ggctgtgcgt gagcattctc
      301 ggtgacggcg atttcctgat gacttccaat gcgctgtgga ccgcggcgaa gtatcagatc
      361 ccgttgcttg tcgtcgtgct caacaaccgt tcctactaca acgacgaaga gcaccaggag
      421 cgcatggcgc gagcgcgcca gcgcccggtg gagaacaaag gcatcggcat ccgcatcgaa
      481 gagccggcgc cggatctggc agcgatagcg cgggcgcttc atgtcgacgc gtttggcccg
      541 gtcacggagc ccggcgaatt gggaccaacc ttggacaaag cgatcgcgat cgttgagagc
      601 ggcaagccgg ccgttgtcga tgtgatcacg cagccgcgct gaggaggaag catgaataag
      661 ttgatcgagg aaaatctgat ggcggtgctg aagcgcgaag ggttggaacc aaagccgggc
      721 gatctggagc agttcaccga gatcatcgag ctctacatgg agaacttgaa acagttgcac
      781 tcggtgaatc tcggcgcgga agagctgggc ccggtgtttc ggccggagtg gaagatctga
      841 attgataatt gaaaattgac aatggaaaat tatcggaggc agttatggcc gtcgcagaaa
      901 agccgcttta ctatctgtcg atccacgaag cgcaacagct catcaaagac cgcaaccttt
      961 ctccggtcga gctgacgcgc gcggtgcttg atcgcattgc cgccgtcgac ggcaagctgc
     1021 acgcatatat caacctgatg gccgacagcg ccatgcagga agcgcgcgcg gccgaggcgg
     1081 agattcaaaa gggcaactgg cgcggaccga tgcacgggat tccgatcgcg gtcaaagacc
     1141 agttggacgt cgaaggcgcg ccggcgcggg tccggcagtt taccaagggc gtgggcgatg
     1201 ccacggcggt gcgcaagctg cgcgaagccg gcgcggtgat gatgggcaaa ctgcacatga
     1261 gcagtttacc cgacgccgaa ttgccggtgc cgcgcaatcc atggaatacc gagcatatca
     1321 ccggcggctc cagcaccggc tcgggcgcgg ccgtggccgg tggcttgtgt ctcggctccc
     1381 tcggcgagga tacggccggc tcgattcgca acccgtccgc cttttgcgga ctcgcgggac
     1441 tgaaggggac ttacggccgg gtgagccgtc atggactggc gccgctcagt tggtccctcg
     1501 atcattgcgg gccgatggcg cgggtcgtcg aagacttggc gcacatgctc aacgcgatcg
     1561 ccggtcacga tccgaaagat ccgacttcga gcagcatgcc gttgatggat tatacgaggg
     1621 cgctccgcga agacgttaag ggaatggtga tcggcgtgcc gcgggattat atcgacgagt
     1681 gcgcgccgcg cacggcgccg atcgttctga agcgcgtcga ccaggctatc gacgagttga
     1741 aatcactggg cgcgcgtgtc gaggagatca aagtcccgac tctgcacttg gcgacgattg
     1801 ccaatgcggt gatttactat aacgaatttt gggcggcgca taagagcgat g
//
LOCUS       DATIRS010001180         1870 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_384244, whole genome shotgun sequence.
ACCESSION   DATIRS010001180 DATIRS010000000
VERSION     DATIRS010001180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1870)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1870)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1870
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_384244"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..196)
                     /locus_tag="VLM90_15105"
     CDS             complement(<1..196)
                     /locus_tag="VLM90_15105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14357.1"
                     /translation="MKLDKMRCVIAVVMISLSMLLPSAQAQKINIAVSNPDMSFLSGG
                     VAKFKGFFKEEGLDAELVQIT"
     gene            complement(360..866)
                     /locus_tag="VLM90_15110"
     CDS             complement(360..866)
                     /locus_tag="VLM90_15110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14358.1"
                     /translation="MTPEAANKVVAGLKQAGIDFVAYLPETRLSEILPVLKADNSFML
                     VPVASEAEAVGIAAGASLGGKQPALYMEGTGLFVSSYNLLTLGERYGVPMLLLISYIG
                     GMDDRRGTFLYSHYGTHMVPQLEALGIQYEIVKEATGIETHIHNAVRLMHGLKQPVAL
                     LFTGECTI"
     gene            complement(879..1769)
                     /locus_tag="VLM90_15115"
     CDS             complement(879..1769)
                     /locus_tag="VLM90_15115"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF012904.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HSQ14359.1"
                     /translation="MIRGVLLPIITPFDDKVQVDEQMMRQLVDFHIKAGVQGLFVLGS
                     TGQGPAMTTEERKQTAAIALDQARKRVPVVIHVGTADAGSAVELAEHAAAHGADAVAI
                     VPPYYYSDHTEFEIIAHYKAVHKAMPLPIYIYENPKYSGISIPPGFAVRMKEQVPALQ
                     GIKVAYGQGALLEYVRLLPDVSVFTGNADLFGLVPFGVAGMINPPTSFAPEICVDLFK
                     KLDSQDYAGAVAAQQKVDTAARIVAARLRKWGRVPLQEVYRMRGFAVKRFPKWETEQM
                     PKDEITKLERELRDNGILGQ"
BASE COUNT          391 a          599 c          492 g          388 t
ORIGIN      
        1 ccgtgatctg caccagctcc gcatccaaac cttcctcttt gaaaaagccc ttgaacttgg
       61 ccactccgcc gctgagaaac gacatgtcgg gattggaaac ggcgatgttg atcttctgcg
      121 cctgcgccga agggagaagc atcgaaaggg aaatcatcac aacggcgatc acgcatcgca
      181 tcttgtccag tttcaccatt tcatcttacc cctaaactcc taaccttcac gctttacctc
      241 actcaaccgg gcatttcgcg atcggggtat gaaccccgct cgcgaccaaa ggggatgttc
      301 aacccccttt ggcaacccca gcaattttgt gcccgcagca agctgcgggg aatattagat
      361 taaatcgtac actcaccggt aaacagcagc gccaccggct gtttcagccc atgcatcagc
      421 cgcaccgcgt tgtggatatg agtttcaatg cccgtggctt ccttgacgat ttcgtactgg
      481 atacccaagg cctcgagttg cggcaccata tgggtgccgt aatgcgaata aagaaacgtg
      541 ccgcgccggt cgtccatgcc gccgatatag ctgatcagca acagcatcgg cacgccgtaa
      601 cgctcaccga gagtgagcaa attgtacgac gagacgaaca ggccggtgcc ttccatgtac
      661 agcgccggct gcttgccgcc gagggaagcg cccgcggcga tgccgaccgc ttccgcttcg
      721 ctggccaccg gcacgagcat gaacgaattg tccgccttca agaccggcag gatctcgctc
      781 aaccgcgtct cagggagata cgcgacgaag tcgatgccgg cttgcttgag cccggcgaca
      841 actttgttgg cagcttcagg cgtcaaattc gcctcgcttc actgaccgag aatgccattg
      901 tcgcgcagct cgcgctccag tttggttatc tcatccttgg gcatctgctc ggtttcccac
      961 ttggggaaac gcttcaccgc gaaaccgcgc atgcgataga cctcttgcag cggcacccgg
     1021 ccccatttgc gcaagcgcgc ggcgacgatg cgcgccgcgg tatcgacttt ctgctgcgct
     1081 gcgacagcgc cggcgtagtc ctggctatcg agtttcttga acaagtcgac gcagatttcc
     1141 ggcgcgaaac tggtcggtgg gttgatcatg ccggcgacgc caaacggaac caggccaaac
     1201 aaatcggcat tgccggtgaa caccgaaaca tccggcagca agcgcacgta ttcgagcagc
     1261 gcgccttggc cgtaggcgac tttgatgccc tgcaatgccg gcacctgctc tttcatgcgc
     1321 acggcgaagc ccggcgggat cgagatgccg gagtatttcg gattttcgta aatatagatc
     1381 ggcagcggca tcgctttatg caccgctttg tagtgcgcga tgatttcgaa ctcggtgtga
     1441 tcggaatagt aatacggcgg cacgatcgcc accgcatcgg cgccatgcgc cgccgcatgc
     1501 tcggccagct ccaccgcgct gccggcgtcg gcggtgccga catgaatcac caccggcacg
     1561 cgcttcctgg cctgatccaa cgcgatcgcc gcggtctgct tgcgctcctc cgtggtcatg
     1621 gccggcccct gacccgtgga gccaagcacg aacagcccct gaactccggc cttgatatga
     1681 aaatcgacca gctggcgcat catctgctca tcgacctgaa ccttgtcatc gaacggcgtg
     1741 atgatcggta acaacactcc acgaatcatg cttccctcct gtttccatgg cagcgcttag
     1801 ccgcgaaatt ctcaattatc tattctccat tatccattaa tctgccgcac tcctaccgcc
     1861 gtatccaaat
//
LOCUS       DATIRS010001181         2455 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_580140, whole genome shotgun sequence.
ACCESSION   DATIRS010001181 DATIRS010000000
VERSION     DATIRS010001181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2455)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2455)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2455
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_580140"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(153..1955)
                     /locus_tag="VLM90_15120"
     CDS             complement(153..1955)
                     /locus_tag="VLM90_15120"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family oligoendopeptidase"
                     /protein_id="HSQ14360.1"
                     /translation="MTWDLTSYFAEFNGAEMVQFKTAIRADVAALQQSAADLPTLTAQ
                     SANGWEDILLRNEDLSRRMSHLGSYIGCLASSDARNEAYQKEEAELSRTRAELAKVRI
                     ELLRACKSADDKVFAAFCARPALAGAHNYLTRLREEARRAMTADKEILATDLGVDGIQ
                     AWGRLYDTVSAKLEFAMVYPDGKRARLPMSQRRSLMDDPDRRVRQAAFEGGNAAWQSV
                     EDTAAAALNAIAGTRLTLNRHRSVDHFLDIALFQAAIGRKTLDAMFEALMANLEIPRR
                     ILQLKAKSMARQQVAWFDLGAPLDLPDHGKLSWDKAQATVAHSFSRAYPALGRFFTEQ
                     VIGKNWVDWEPRQGKRPGGFCTSSMLSKESRIFMTYNESLGDVLTLAHESGHAYHGAL
                     MRDIRPYARGYPMTLAETASTFGENVLMNGILDDPTVSASDKARILDIEVGHGAVYLL
                     DIPVRYEFEKSFYEERANGPLSVSRLKELMVQTQRQVLGDVLETGGEDPYFWASKLHF
                     YITGITFYNFPYTFGYLLSRGLYAMFSNEGDSFLPKYEEFLRHAGSDTAENVVRQTVG
                     RDIEKTEFWSEAIQSLEEPLSQLQALIPKLNMQN"
     gene            complement(2015..>2455)
                     /locus_tag="VLM90_15125"
     CDS             complement(2015..>2455)
                     /locus_tag="VLM90_15125"
                     /inference="COORDINATES: protein motif:HMM:NF014476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14361.1"
                     /translation="IEVVDSAQAAVRESDLLVTVTTAKEPIIQAEWLKPGVHINAVGS
                     HRPDLREIDGATLKRAKAVVDSREAVMAECGDILLALKEQSIGAADIHGEIGEVLAGA
                     KAGRSSPNEVTLYKSVGIAIQDVAAAQMVYRKALAQNVGTHVEI"
BASE COUNT          437 a          698 c          745 g          575 t
ORIGIN      
        1 ctctttcttc gtgctcttcg tgtccttcgt ggtgggctgt cctttacgat ttttgtgttc
       61 ttggcccttt gcggttaatt atccgattcc gaatctttct tcggttgcgg ctgtgctgct
      121 ttagctcctg cgtggtgaaa aactcttgcc cactagtttt gcatattcag tttcggtatc
      181 agcgcttgca gctggctgag tggctcttcc aagctctgga tcgcttcgct ccagaattca
      241 gttttctcga tatctctgcc gaccgtctgt cgcacgacat tctccgccgt gtcgctgccg
      301 gcgtggcgca ggaattcttc gtatttaggc agaaaactat cgccttcgtt gctaaacatg
      361 gcgtagagtc cgcggctgag cagatagccg aaggtgtagg ggaaattgta gaaggtgatg
      421 ccggtgatat agaaatgcag ctttgacgcc cagaagtagg gatcctcgcc gccggtttcg
      481 agcacgtcac ccaaaacctg tcgttgcgtc tgcaccatca gctcttttag tcgcgacacg
      541 ctcagcggcc cgttggctcg ttcttcgtaa aaagattttt caaactcata gcgcaccggg
      601 atgtccagca aatagaccgc gccatggccg acttcgatgt cgaggatacg cgctttgtca
      661 ctggcgctga ccgtcgggtc gtcgaggatg ccgttcatca agacattttc accgaaggtc
      721 gacgcggttt ccgccagcgt catcggatag ccgcgggcgt agggacggat gtcgcgcatc
      781 aaggcgccat gataggcgtg gcccgattca tgggcgaggg tcaggacatc gcccagggac
      841 tcgttgtagg tcatgaagat gcgtgattcc ttgctcagca tggagctcgt gcaaaaaccg
      901 ccgggccgtt tgccctggcg cggctcccaa tcgacccagt tcttgccgat gacctgctcg
      961 gtgaagaatc ttcccagcgc cgggtaagcg cggctaaacg agtgggcgac ggtggcttgg
     1021 gctttgtccc aagacagttt cccgtgatcc ggcagatcga ggggggcgcc gagatcgaac
     1081 caggcgacct gctggcgcgc catcgatttg gcttttagtt ggagaatgcg ccgcggtatt
     1141 tccaggttcg ccatcagcgc ctcgaacatg gcgtcgaggg tcttgcgccc gatcgcggct
     1201 tgaaacagcg cgatgtcgag aaaatgatcg acgctgcggt ggcgattcaa tgtcaacctt
     1261 gtgccggcga tggcgttgag ggcggcggcg gcggtgtctt cgacgctttg ccaagccgcg
     1321 ttgccgcctt cgaaggcggc ttggcgcaca cgccggtcgg gatcgtccat caacgaacgg
     1381 cgttgcgaca tcggcaaacg cgcgcgcttg ccgtcgggat agaccatggc gaattccagt
     1441 ttggcagaca ccgtatcgta gagccgtccc caagcctgga tgccgtcgac gcccaagtcg
     1501 gtggcgagaa tttctttatc cgccgtcatc gcgcggcgcg cttcttcgcg caggcgggtc
     1561 agatagttgt gcgccccagc cagtgcagga cgggcgcaga acgccgcaaa gactttgtca
     1621 tcggcgctct tgcaggcgcg cagcagttcg attctgactt tagcgagctc ggcgcgggtg
     1681 cggctgagct cggcttcttc tttctgatac gcttcgttgc gcgcgtcgga tgaagccagg
     1741 cagccgatat aggaaccgag gtgcgacatg cggcgcgaca gatcttcgtt gcgcaggaga
     1801 atatcttccc agccatttgc cgattgcgca gtgagtgtcg gcaaatcagc ggcgctttgc
     1861 tgcagcgcag cgacatcggc gcggatggcg gttttgaatt gaaccatctc ggcgccgtta
     1921 aattcagcaa agtaactcgt cagatcccag gtcatattag ttccgatgtc ggggccggtt
     1981 ttaaacccgc cggtccgtcg tgtgcagccg cagattaaat ttccacatgg gtgccgacgt
     2041 tttgcgccaa cgccttacga taaaccatct gcgcggcggc gacatcttga atcgcgatgc
     2101 cgacggattt gtagagtgtg acttcattcg ggctgcttcg tcccgccttg gcgccagcga
     2161 gcacttcgcc gatctcgcca tggatatcgg ctgcgccgat ggactgttct ttgagcgcga
     2221 gcaggatgtc gccacactcg gccatgaccg cttcgcgcga gtcgaccaca gccttggcgc
     2281 gtttcaatgt cgcgccgtcg atctcgcgca gatcgggacg gtgcgagccg acggcgttga
     2341 tgtggacgcc aggcttgagc cattctgcct ggatgattgg ctctttggcg gtggttaccg
     2401 tcaccaggag atcgctttcg cgtaccgcag cttgcgccga atcaaccacc tcgat
//
LOCUS       DATIRS010001182         1518 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_285650, whole genome shotgun sequence.
ACCESSION   DATIRS010001182 DATIRS010000000
VERSION     DATIRS010001182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1518
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_285650"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..555)
                     /locus_tag="VLM90_15130"
     CDS             complement(<1..555)
                     /locus_tag="VLM90_15130"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ14362.1"
                     /translation="MTTAAAEDAAKIAVSLRGLWKTYEGSSKPAVQNLSLDIRDGEIL
                     TLLGPSGCGKTTTLRMVAGLEHPDAGDIHFGAQAVVMTAKRLFMPPDERNVGMVFQSY
                     AIWPHMTVAENVAFPLHARRFPKSEIKGRVLKALDLVGLSGFEDRPGPLLSGGQQQRV
                     AFARALVTEPRVLLLDEPFSNLDAK"
     gene            1027..>1518
                     /locus_tag="VLM90_15135"
     CDS             1027..>1518
                     /locus_tag="VLM90_15135"
                     /inference="COORDINATES: protein motif:HMM:NF025078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4157 domain-containing protein"
                     /protein_id="HSQ14363.1"
                     /translation="MTAAAAPLQNVAAKPPPPSHSMHAGLVLQRTCACGAPTASLTGE
                     CMECARKKFLQAKLTIGASNDPLEQEADRVVEQVMARPVSGAVSTALPRIQRFTGSTS
                     ASAGNAPASVDHVLSSPGRPLDPSLRQDMEQHFGHDFSQVRVHADGAAERSAREVNAN
                     AYTV"
BASE COUNT          295 a          448 c          496 g          279 t
ORIGIN      
        1 tttcgcgtcg aggttgctga acggctcgtc gagcagcagg acgcgcggtt cagtgaccag
       61 ggcacgggcg aaggcgacgc gctgttgctg gccgccgctc aggagcggcc ccggccgatc
      121 ttcaaaaccg ctcaagccga ccaggtcgag ggctttcaac acgcgtcctt tgatttcgct
      181 ctttgggaag cggcgcgcgt ggagcgggaa agcgacgttt tcggccaccg tcatgtgcgg
      241 ccagatggcg taggactgaa acaccatgcc gacgttgcgc tcgtcgggcg gcatgaacag
      301 ccgtttggcg gtcatgacca cggcttgcgc gccgaaatgg atatcgccgg cgtcgggatg
      361 ttccaaaccg gcgaccattc tcaaagtcgt ggttttgccg cagccgctgg ggccgagcag
      421 ggtcaggatc tcgccgtcac gaatatcgag ggagaggttt tgcaccgccg gtttgctgct
      481 gccctcgtag gttttccaca gcccgcgcag gctgacggcg atcttggcag catcctcggc
      541 tgctgccgtt gtcatggcgg ctaatgttgg cgcggcgctc gtcatggtgc tgattctctt
      601 acacgaaagt tacgcggtac tctagaggga ttcggcgggc gggttcaaaa ccagccccct
      661 acgaaggcgg tgcagccgcg atcgagaaat aaagacgcta ttcaccacga aggtcctagc
      721 gcggcaccgc cgcaaccgag actcggaaca tctcgcgcaa agcacgcaaa gggcgcaaag
      781 gtaaaggaaa tctgtcattt cgaccgaagg agagatcttt ccgatatccc tcgcatccca
      841 tcgggatgac cggcctcggc ccgtcacttt gcgacctcgg cgtccttggc gcgaggcata
      901 tccgaatccg agacgttctg ggctaagaaa atttgcgcaa gtttcgcaaa ctgtgagctt
      961 ttgcgatgca atgctgttgc gcatcggcga aaacgtagcg cgcgttatcg gcaaggagct
     1021 aatgaaatga ccgccgccgc cgcgcctttg cagaacgttg ccgctaagcc gccgccgccg
     1081 agccattcga tgcatgccgg tttggtgctg caacggacgt gcgcgtgcgg cgcgccgacc
     1141 gcgtcgctga ccggcgagtg catggaatgt gcgagaaaaa aattcctgca agcgaagctc
     1201 accattggcg cgagcaacga cccgctggaa caggaagcgg accgggtcgt ggagcaggtg
     1261 atggccaggc cggtaagtgg cgctgttagc acggcgctac cgcgcatcca gcgctttacg
     1321 gggtcaacga gcgcgtcggc aggtaacgcg cccgccagcg tggatcacgt gctttccagc
     1381 cccggtaggc cgctggaccc ttcgctacgg caggacatgg agcagcattt cggccatgac
     1441 ttttcccagg tgcgggtgca cgcggatggg gctgccgaac gctcggcgcg ggaggtgaac
     1501 gccaatgcgt acacagtg
//
LOCUS       DATIRS010001183         1514 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1761613, whole genome shotgun sequence.
ACCESSION   DATIRS010001183 DATIRS010000000
VERSION     DATIRS010001183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1514)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1514)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1514
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1761613"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..571
                     /locus_tag="VLM90_15140"
     CDS             <1..571
                     /locus_tag="VLM90_15140"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14364.1"
                     /translation="IARYALTKIGLTPGKDVTIVQIGSTTARVDAVLAGRVQATVVNP
                     PASIIAQKRGMNTLADLPKLGLVYQHTAVATTKKYIRENRDVVRRYVKSQIEAVHRIY
                     TDKESAIRALGRFIGRTVERDVLEKTWENLISEAVMPKKQYPSIEGLKTILASEPKAK
                     SHNPEDYFDASFVKELDLSGYTDSLYKKR"
     gene            615..>1514
                     /locus_tag="VLM90_15145"
     CDS             615..>1514
                     /locus_tag="VLM90_15145"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ14365.1"
                     /translation="MKFAHFSHVWNKPGMNAAERYGQLWRELAAADELGFDYGFCVEH
                     HFNPRESWMPSPSIYCAAAAAKTKRLRVGTMGNIAPLYDPLRIAEDAAVLDNLANGRF
                     ELGLVSGIVPDFFGPYGADFSNRRALTHEALLCIKQALASQGPFSFNGEFHQYQNVTL
                     GVKPLQQPHPPIWIHSRDADTLALLAREGVHTGYLFLVPRDEVAPRYHEYLRLWNEAH
                     HPGKPNIGYWVLVYVDETEAKAGAKAKPYFEHCFTNVFGTRAEGGIGYQRLAENHEKR
                     GNPRGAEIARHSIDVEYLREKNLA"
BASE COUNT          356 a          445 c          411 g          302 t
ORIGIN      
        1 tatcgcccgc tacgcgctga cgaagattgg tttgacgccc ggcaaggatg ttaccatcgt
       61 gcaaatcggc agcaccacgg cgcgcgtcga cgcggtgctc gccggacgcg tgcaagccac
      121 agtggtcaat ccgccggcca gtatcatcgc gcaaaagcgc ggcatgaata ctctcgccga
      181 tctgcccaag cttggacttg tctatcaaca caccgccgtc gccacgacca aaaaatatat
      241 tcgggaaaat cgcgatgtcg ttaggcgcta tgtaaaatct caaatcgaag ccgtccatcg
      301 tatttacacc gataaagaaa gcgctatccg agccttgggg cgatttatcg gccgtaccgt
      361 cgagcgcgat gtcttggaaa aaacctggga aaatttaatc agtgaagcgg tgatgcccaa
      421 aaagcaatat ccgtccatcg aagggctgaa aaccatcctc gcttcagagc cgaaagccaa
      481 gtcgcacaac cccgaggact atttcgacgc cagcttcgtt aaagaattgg atctgagcgg
      541 ttataccgat agcctctaca agaaacgttg agcgatgttg ccgagttaac gctaaaaggt
      601 cgatacggac tgccatgaaa ttcgcccact tctctcacgt ttggaacaag cccggaatga
      661 acgcggcgga gcgctacggg caactgtggc gcgaattagc agcggcagac gaactcggtt
      721 ttgactatgg cttttgcgtc gagcatcact tcaatccgcg cgaaagctgg atgccgtcgc
      781 cgtcaattta ctgcgccgcg gcggcggcaa agacgaaacg gctgcgcgtc ggcaccatgg
      841 gcaatatcgc gccgctttac gatcccttgc gtatcgccga agacgccgcg gtgctcgaca
      901 acctcgccaa tggccggttt gaactgggac tcgtctccgg cattgtgccc gacttcttcg
      961 gcccctacgg cgctgatttt agtaatcgcc gcgcgctcac tcacgaagcg ctgctctgca
     1021 tcaaacaagc gctggcgagc caggggccgt tcagcttcaa cggggaattt caccagtacc
     1081 agaacgtcac gctcggggtt aagccgctcc aacagcccca tccgccgatt tggattcatt
     1141 cgcgtgacgc cgacactctg gcgctccttg cccgcgaagg cgtccatacg ggatatcttt
     1201 tcttggtgcc gcgcgacgag gttgcgccgc gctatcacga atatttgcgc ctgtggaatg
     1261 aagcgcatca cccaggcaag ccaaatatcg gttactgggt gttagtctac gttgatgaga
     1321 ccgaggccaa agccggggcc aaagcgaaac cctatttcga gcactgtttc accaatgtat
     1381 ttggcacccg cgcggaaggt ggcatcggct accagcggct tgccgagaac cacgagaaac
     1441 gcggcaatcc ccgcggcgcc gagatcgcgc gccactcgat cgatgtcgaa tatttgcgag
     1501 aaaagaattt agcc
//
LOCUS       DATIRS010001184         2020 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_285887, whole genome shotgun sequence.
ACCESSION   DATIRS010001184 DATIRS010000000
VERSION     DATIRS010001184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2020
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_285887"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1406)
                     /locus_tag="VLM90_15150"
     CDS             complement(<1..1406)
                     /locus_tag="VLM90_15150"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HSQ14366.1"
                     /translation="MLASRRFMEGERKRVTVLFADIRGSTSFIEKLDPEEVRKHFDPV
                     LRVMMAAVHRYDGTVNQVLGDGIMALFGAPLAHEDHALRACYAALAMQAELRRGGGTD
                     GALPQSSRLQIGIGINSGEVVVRSLTNDLNIDYSALGQTTHLAARMESLAGPGSIAIT
                     ADTLREVEGFVEVRPLGALQVKGFSTAIDAFELTGATAARNRLQAAEARGLSPFVGRR
                     TEIAFARQMLAQTAAGHGRILAVVGEAGMGKSRLLRQFLDHHVSSEWRVIAAPSVSYG
                     KATPYFPVIELLRGFFNLHESDDADAVRSRVAEEVLTLDPSLSDAVAPILALLEALPD
                     GSTEPTHSLSRWLEAFPAVAVATANYRAMDLPGRRASTLAVLVRLLLRASSLKPLLLV
                     FEDLHWIDSETQAFLDVLVDSLPVGRVCLLVNYRPGYSHAWANKEHYSCLRLNPLTAA
                     GAEELLDALMGDHGDLATV"
     gene            complement(1715..>2020)
                     /locus_tag="VLM90_15155"
     CDS             complement(1715..>2020)
                     /locus_tag="VLM90_15155"
                     /inference="COORDINATES: protein motif:HMM:NF014136.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HSQ14367.1"
                     /translation="GGPTTATMSCRIQLLGPGEQTQPHRHTGNTVYHVVRGQGVARIG
                     KSRAATSDLAWNERDCFNVPTWHWHRFLNISSADDAILFSVSDRPLFDAIHLYREES"
BASE COUNT          414 a          647 c          594 g          365 t
ORIGIN      
        1 accgtcgcca gatcgccatg atcgcccatc agcgcgtcga gcaactcttc agcgcccgcc
       61 gccgtcaatg gattgagtcg caaacagctg tagtgctctt tattggccca tgcgtggctg
      121 tagcccggcc ggtagttgac caacaagcag acccgcccga ccggcagact gtcaaccaaa
      181 acgtcgagaa acgcttgggt ctcgctgtcg atccagtgca gatcctcgaa gactagaagc
      241 agcggtttca agctgctcgc tcgcaagagc aaacgcacta aaaccgccag agtcgatgcg
      301 cgccgtcccg gcaaatccat ggcacggtaa ttcgccgttg cgaccgcgac agcggggaac
      361 gcctcgagcc accgcgatag cgaatgggtc ggttcggttg acccatccgg cagcgcctcg
      421 agcagcgcca gtatcggcgc cacggcgtcg ctcaaacttg ggtcaagggt cagcacctct
      481 tcagcgaccc gcgagcgcac agcatcggcg tcgtcgcttt cgtgcaagtt aaaaaatccc
      541 cgcagcaatt cgatcaccgg aaaatagggc gtcgccttgc cataggacac cgacggcgct
      601 gcgatcacgc gccactcgga ggagacgtga tgatcgagaa actggcgcag caaacgagat
      661 ttgcccatgc cggcttcgcc gacaaccgcc aagatccggc catggccggc ggcagtttgc
      721 gccaacattt gccgggcaaa cgcaatctcc gtccggcgcc cgacgaaggg cgacagtccg
      781 cgcgcctccg ccgcttgcaa gcgattgcgc gccgcggtcg ccccggtcag ttcaaaggca
      841 tcgatggcag tggagaagcc cttgacttgg agcgcaccca acggccgcac ctcaacgaat
      901 ccttctactt cgcgcaaggt gtcggcggtg attgcgatcg atcccggccc cgccagcgat
      961 tccatgcgcg cggcgagatg ggtagtttgc ccgagcgccg agtagtcgat gttgagatcg
     1021 ttggtcagcg agcggacgac cacttcgccg gagttgatac cgatgccgat ctgcaggcgc
     1081 gacgactggg gtaacgcgcc atccgtgccg ccgccacggc gcaattccgc ttgcatcgcc
     1141 agcgccgcat agcaggcgcg cagggcatga tcttcatgcg ccaggggtgc gccgaacagc
     1201 gccatgatgc catcgcccaa aacttgattg accgtgccgt cgtaccgatg caccgcggcc
     1261 atcatgaccc gcagcactgg atcgaaatgc ttacgcacct cttccggatc gagtttctcg
     1321 atgaaactgg tcgaaccgcg gatgtcggcg aacaagaccg tcactctttt acgttcgcct
     1381 tccatgaagc gacgcgacgc gagcatgcgg tccgcgacgt tatcggctgg aacggatgaa
     1441 gccgcaggac tcggcgccgc cgcgtttgcg ccatcaccaa gccgggcgcc gcactttttg
     1501 caaaatttcg cgccagtgcg gttgctttcg ccgcattgcc cgcagttggc attgaacggc
     1561 gcgccgcatt cgtcgcaaaa ctgcgcgtcc gccgcgttgg tatgctgaca ggcgcggcaa
     1621 attattctcc gctcatccgc catgcttgcg tttttaacgc aattccagcg acggcgcaaa
     1681 gagatttgcc ggtattaaga gactcaccgc gaatttagga ttcttcgcgg tacagatgga
     1741 tcgcatcgaa caagggccgg tcagagaccg agaaaagaat cgcgtcgtcc gcactggata
     1801 tgttgagaaa acgatgccag tgccaggtcg gcacattgaa gcagtcccgc tcgttccacg
     1861 ccaagtcgct ggtagcggcg cggctcttgc cgatcctggc aacgccttga ccgcgcacca
     1921 catgataaac ggtattgccg gtatgacgat gcggctgcgt ctgttcgccg ggaccgagca
     1981 gttgaattcg acagctcatc gtcgccgtcg tcggaccgcc
//
LOCUS       DATIRS010001185         3023 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_285894, whole genome shotgun sequence.
ACCESSION   DATIRS010001185 DATIRS010000000
VERSION     DATIRS010001185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3023
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_285894"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            289..1389
                     /locus_tag="VLM90_15160"
     CDS             289..1389
                     /locus_tag="VLM90_15160"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ14368.1"
                     /translation="MAQPFPIIDADAHVIETERTWDYLDESDRKYRPRLYSTPNDPTR
                     QYWVLEDKIAGFRFLTLSERELREFADRAGRNFATPQAARELDDVELRLKHMDELGID
                     VQVLHNTFWIEQVTSNRQAEVAVCRSWNRWLADISQKSHGRLFYSCVVPALDIDAAIA
                     EIKFAKDNGGVAVCMRPLEGDRHLSDPYFYPIYQTASDLDLAIAVHIANGNPANADLY
                     RQAPAGRFAQFRVPTVTACFDVIMSELHQVFPKLRWGFIEASAQWVPWIARETAIRYR
                     AQGRIFPENVFGEYQIYVTCQTNDDVPYVVNCCGEDRLVIGTDYGHTDPSSAVTALNE
                     FQRMEGLDASVKEKILSHNAKALYNLSSNGVH"
     gene            1730..2977
                     /gene="cofH"
                     /locus_tag="VLM90_15165"
     CDS             1730..2977
                     /gene="cofH"
                     /locus_tag="VLM90_15165"
                     /EC_number="2.5.1.147"
                     /inference="COORDINATES: protein motif:HMM:NF005609.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-amino-6-(D-ribitylamino)uracil--L-tyrosine
                     4-hydroxyphenyl transferase CofH"
                     /protein_id="HSQ14369.1"
                     /translation="MSRGTATILDRALAGQDLSVDEATTLFEADGSDLLAILAAADQL
                     RAQTVVDVVSYVINRNINFTNVCVKQCGFCAFSRGHLAEEGYFLPIEEIIRRATEARD
                     LGASEVCIQAGLAPGMDGWHYVTLCRAVKEALPELHIHGFSPEEVLYGSTLTGASIRD
                     YLLALKDAGVGSLPGTSAEVFVDAVRQRISPGRISIDNWIEVIQTAHEVGIPTTSTIM
                     YGHIETARHRAIHLSVLRDVQKRTGGITEFVPLSFVYEEAPMSHRQALPELRHGASGA
                     EVMKMYAVSRLMLNNWIPNLQVSWVKEGPKLSQIALLAGANDFGGTLINESISTAAGA
                     GYGQLMKPSQFRGLIREMSRIPAERSTTYQKVRVFETEDNHRDLLDEINDPAQRFGSY
                     QNLIHLKDYRFRDFYKEQRSSKQ"
BASE COUNT          626 a          955 c          842 g          600 t
ORIGIN      
        1 gcttgggtag atccttgaga tcggcggaga gacagacagg ttgccagtag cggcgcatca
       61 gttcgccgca tggcgtgccc ggtccaacac gagtcaactc gccatcgggt tcgggaattt
      121 tgagaccgta ggcgcttttc attgcctgcc actccgaccg aataataccg cgcagatcat
      181 atgccgccgc gcgcgggagt caaggtaaaa cttgccgctt gcttgacagc ggcgcgccat
      241 ccgcactagt ttcaaacatt cgtcacttgg ccgaaaggag ttcgtcctat ggctcagcca
      301 tttccgatca tcgatgccga tgcccatgtc atcgaaaccg aacgcacctg ggactatctc
      361 gatgaatccg accgcaagta ccgtcctcgt ctttattcga cgcccaacga tccgacgcgc
      421 cagtattggg tcttggaaga caagatcgcc ggctttcgct ttctcacgct gagcgagcgc
      481 gagctgcgcg agttcgccga ccgcgccggc aggaatttcg ccacgccgca ggcggcgcgc
      541 gagttggacg acgtcgagct acggctcaaa cacatggacg agctgggcat cgacgttcag
      601 gtgctgcaca acaccttctg gatcgaacag gtgaccagca accgtcaagc cgaagtcgcg
      661 gtgtgccgca gttggaaccg ctggctcgcc gatatttccc agaaaagcca tggccggctc
      721 ttttactcct gcgtcgtgcc ggccctcgac atcgacgcgg ccatcgccga aatcaagttc
      781 gccaaagaca acggcggcgt cgccgtctgc atgcgcccgc tcgaaggcga ccgccattta
      841 tccgatccct atttttatcc gatctaccaa accgccagcg atctcgacct cgcgatcgcc
      901 gtgcatatcg ccaacggcaa tccagcgaac gccgacctct atcgccaagc gccggccggc
      961 cgcttcgccc agttccgcgt gccgacggtc accgcctgct tcgatgtcat catgagcgag
     1021 ctgcaccaag tgtttcccaa actgcgctgg ggatttatcg aagcgtcggc gcagtgggta
     1081 ccctggatcg cccgcgagac cgcgatccgc taccgcgccc aaggacggat ttttcccgag
     1141 aacgttttcg gcgaatacca gatctacgtc acctgccaga ccaacgacga cgtgccctat
     1201 gtggtcaatt gctgcggcga ggatcgcctg gtgattggca ccgactacgg ccacaccgac
     1261 ccgtcaagcg cggtgaccgc gttgaacgaa tttcaacgga tggaaggctt ggacgcgtcg
     1321 gtcaaagaaa aaatcctgtc gcataacgcc aaggcgcttt acaatctaag cagcaatggc
     1381 gttcattagg cggagagatt ccagggtaag cgaatgtagc gcacaagccg gcaaggtttg
     1441 tcggatgcgt tgacccaagg gaagcgcatc gttgatgagt cgcactcgct cgatgcggtt
     1501 cgcggactca ccacattcta caggtttcgc cattttgatt gtccgcaggt gtgcgtaatc
     1561 acatgaacca cttcgtggcg catatttctt gcaggacagc gatttttcgt tggccctgcc
     1621 cgccaagtca tctctgcgcg acagcgttga gtttccccaa gtgacaggct agagtcgcgc
     1681 catgaatttg ccgcacctgg aatcgtctct caatcgactg ctgacgaccg tgtcccgggg
     1741 caccgcgacg attctcgatc gcgcccttgc cggccaggat ctgtcagtcg acgaggcaac
     1801 gacgctgttc gaggcggacg gatccgattt attagccatc cttgccgccg ccgaccaact
     1861 gcgcgctcag accgtcgtcg acgtggtcag ctacgtcatc aatcgcaaca tcaattttac
     1921 caacgtgtgc gtcaagcagt gcggcttttg tgccttcagc cgaggccatc tcgccgaaga
     1981 aggttacttt ctcccgatcg aggaaatcat ccggcgcgct actgaagcgc gcgacctcgg
     2041 cgccagcgaa gtgtgcattc aggcgggact cgcacccggc atggacggtt ggcattacgt
     2101 cacactttgc cgcgccgtga aagaagccct gccggaactg catattcacg gcttttctcc
     2161 tgaggaagtg ctctacggtt cgacgctcac cggtgccagc atccgcgatt acctgttggc
     2221 cctgaaagac gccggcgtcg gtagcttgcc gggcacgtcg gctgaagttt tcgtcgacgc
     2281 cgtgcgccag cgcatctccc cgggccgcat cagcatcgac aactggatcg aggtgatcca
     2341 aaccgcccat gaagtcggca tcccgaccac ctcgacgatc atgtacggcc atatcgagac
     2401 ggcgcgccat cgggcgattc atttgagcgt gctgcgcgac gtgcagaaac gcaccggcgg
     2461 catcaccgag ttcgtgccat tgagcttcgt ctacgaagaa gcgccgatgt cgcatcgcca
     2521 ggcgctgccc gaactgcgcc atggtgccag cggtgcggaa gtcatgaaga tgtacgccgt
     2581 gtcgcggctg atgctcaaca actggattcc caacttgcag gtctcttggg tcaaggaagg
     2641 gccgaagctg tcgcagatcg ccctgctcgc cggcgccaac gatttcggcg gcacgctgat
     2701 caacgaaagc atttccaccg ccgccggcgc cggctacggc cagctgatga agccgtcgca
     2761 attccgcggc ctgatccgtg aaatgagccg catcccggcg gagcgctcga ccacctatca
     2821 aaaagtccgc gtcttcgaga ccgaagacaa tcaccgcgac ctgctcgatg agatcaacga
     2881 cccggcgcag cgcttcggct cgtatcagaa tttaattcat ctcaaagact atcgcttccg
     2941 cgacttctac aaggaacagc gcagttccaa gcagtagtta cgcgatcccc tgccaccgca
     3001 gcataattct tagcgatgat cgg
//
LOCUS       DATIRS010001186         5064 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_88838, whole genome shotgun sequence.
ACCESSION   DATIRS010001186 DATIRS010000000
VERSION     DATIRS010001186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 5064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5064
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88838"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..342
                     /locus_tag="VLM90_15170"
     CDS             <1..342
                     /locus_tag="VLM90_15170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14370.1"
                     /translation="ALLGAYRYYMGWVLLVSYFTVYAVLYPRYRQASWRVLAPSAVAT
                     LLTLALLGIAGQGLQLFHLLALMLLLGIGVDYGIILQEPDSQEDGTAWVAVGISALNT
                     LLSFGSCKIIP"
     gene            complement(255..2483)
                     /locus_tag="VLM90_15175"
     CDS             complement(255..2483)
                     /locus_tag="VLM90_15175"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HSQ14371.1"
                     /translation="MNPRQWVPWLWAAVVAVVVIHNGYLWWQQRLVPDTNILALLPAM
                     GRDPVVQRALPQMFEAAEQRVIVLIGAADWDDARRAAAVYRQTIAPYRHLLFAAEAIT
                     ERTETDWLETFKNHRLTLLTSEDDAALRSQAPSYWVDRALAKLYSPFAGPQPLAWQED
                     PFGLFNNWLLARAQETPVRPRGGELSVSTGERHYVVLPLTLRVPAFALAGQQAVMPVL
                     EQARQAVWQTSKRIEIVQAGVILHAAAAANQAQREMFIIGTGSMAGILFLIWMTFHSL
                     KPIILVTFSMAIGCLGALSICSWLLFERIHLITLVFGASLIGVAQDYGIYFFCQRASA
                     ANDSLDSWRLLRRILPALILTMVTTLIGYLGLVLTPFPGLRQMALFSCTGLIFAWLTV
                     VCWFPALARPATLGLHRWAQRYGRTMTAWPRLASDRRTLYVTLTFAGLLLFGGLRLSV
                     QDDIRALQKPPQNLLDDQVKLGKILDLATPVQFYLLRAASAEALLQREETLKPRLDLL
                     VQQNQITGYQAISNWLPSAHLQASRRQLIERSLLNEQGALARMAAKLGEAPSWWSAAR
                     ERLLAAALPITVDDFFKSPASQPWRHLWLGQVGDQHASIVALRGVTRSSLPALGQAAA
                     RLEGVVWIDQVSQISALLGAYRYYMGWVLLVSYVAVYALLYPRYRRASWRVLAPTAVA
                     TLLTLALLGIAGQGLQLFHLLALLLLLGIGVDYGIILQEPKDNSVFNAEIPTATQAVP
                     SS"
     gene            complement(2725..3327)
                     /locus_tag="VLM90_15180"
     CDS             complement(2725..3327)
                     /locus_tag="VLM90_15180"
                     /inference="COORDINATES: protein motif:HMM:NF039988.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA];
                     GO_process: GO:0044874 - lipoprotein localization to outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein carrier protein LolA"
                     /protein_id="HSQ14372.1"
                     /translation="MKRKTLAICLSLMVWPLLGAAPVAEIQAILAQPKVLCGRFDQIK
                     QLAGLKNPLRSHGRFCVVADKGVLWRSLQPFANTLRLTRDEIVQWQGERLAMRLNAKQ
                     EPTVRIINSLLFSVLAGDLGQLEKHFDVDGSVSDGAWSVKLKARDAGVAKVIGAIALD
                     GAAYVKNIAIDEANGDRTRIAFSSLQTGAQAMTSEEAALF"
     gene            complement(3324..3752)
                     /locus_tag="VLM90_15185"
     CDS             complement(3324..3752)
                     /locus_tag="VLM90_15185"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HSQ14373.1"
                     /translation="MSKTPSRWFAETETQVQFNHLDPMEIVWHGHYVNYLEIVRSVLL
                     NSIDYNYPQMKASGYVWPVIDLHIRYIAPAKFAERLKLRAEIVEWENRLKIAYLLTDG
                     ATGRRVGRASTTQVAVELATGEMCFVSPPVLFEKLGVTPP"
     gene            complement(4154..>5064)
                     /locus_tag="VLM90_15190"
     CDS             complement(4154..>5064)
                     /locus_tag="VLM90_15190"
                     /inference="COORDINATES: protein motif:HMM:NF012447.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aromatic amino acid ammonia-lyase"
                     /protein_id="HSQ14374.1"
                     /translation="CLNYVRAEYLTRLTTRISALASFAMDGNAEHFDATLFSVKPHPG
                     QQLVAGWLRQDLPVQPSAANGKRLQDRYSIRCAPHVIGVLADALPWLRSYIENELNSA
                     NDNPIVDAVSERVLHGGHFYGGHIAFAMDSMKNAVANLADLLDRQMALLVDSRYSNGL
                     PANLSGVTGPRAAINHGLKALQISVSAWTAEALKLTMPASVFSRSTECHNQDKVSMGT
                     IAARDCTRVLELTEQVAAGLLITVRQAVWLRCRMNPALAPSPSLQTMIDALSGDIAVI
                     EEDRRLEPDLRLLLERMRDRAWKIYR"
BASE COUNT         1066 a         1506 c         1518 g          974 t
ORIGIN      
        1 gcgctgctcg gcgcctatcg ctactacatg ggctgggtgc tgctggtctc atactttacc
       61 gtctacgcag tgctttatcc gcgttatcgc caagccagtt ggcgagtatt ggcgccgagc
      121 gcggtggcga cgctgctgac gctggccctc ttgggcattg ccggccaagg gttgcagttg
      181 tttcacctgt tggcgctcat gctgttgctc ggcatcggcg tcgactacgg gattattttg
      241 caagagccgg acagtcaaga ggacggcaca gcctgggttg ctgtcggtat ctcggcgtta
      301 aacacgctgt tgtccttcgg ctcttgcaaa ataatcccgt agtcgacgcc gatgccgagc
      361 agcagcagga gcgccaacag atgaaacaac tgcagccctt ggccggcgat gcccaggagc
      421 gccagcgtca gcagcgtcgc caccgcggtg ggcgccaaga cccgccaact ggctcggcga
      481 tagcgcggat aaagcaatgc atagacggca acgtatgaga ccagcagtac ccagcccatg
      541 tagtagcgat aggcgccgag cagcgcggaa atctggctga cttgatcgat ccaaacgaca
      601 ccttcgagac gcgctgcggc ctggccaagg gcgggcaagc tgctcctggt cacgccgcga
      661 agcgcaacga tgctggcgtg ttggtcaccc acttggccca accaaagatg gcgccaaggt
      721 tggctcgccg gcgatttgaa aaaatcatcg acggtgatcg gcagtgccgc cgccagcaag
      781 cgctcacgag cggcgctcca ccatgacgga gcttcaccga gcttagccgc catcctcgcc
      841 aacgcaccct gctcgtttaa tagcgatcgc tcgatcagct gtcggcgcga cgcctgcaag
      901 tgcgccgacg gcagccagtt ggaaatcgcc tgataaccgg tgatctggtt ttgttgaact
      961 agcagatcga gccgcggttt tagcgtctcc tcccgttgca agagcgcttc ggcgctggcg
     1021 gcgcgcaaca aatagaattg caccggtgtc gccaagtcga gaattttgcc gagcttcacc
     1081 tgatcgtcga gcaagttttg cggcggtttt tgcagtgcgc gaatgtcatc ctgcacgctc
     1141 aggcgcaagc cgccgaagag cagcaaaccg gcaaacgtta gagttacgta aagcgtccgc
     1201 cgatcggacg ccaagcgcgg ccaagctgtc atggtgcgac catagcgttg cgcccaacgg
     1261 tgcaggccca gagtagcggg gcgcgccaaa gcgggaaacc aacaaaccac cgtgagccag
     1321 gcgaaaatca gtccggtgca ggagaacagc gccatctgac gcagaccggg aaacggcgtc
     1381 agaaccaaac cgagatagcc gatcagcgtc gtcaccatgg ttaaaatcag cgccggcagg
     1441 atccgccgca gcaagcgcca ggagtcgagc gagtcatttg ccgcgctcgc cctttggcag
     1501 aaaaaataaa tgccgtaatc ctgcgccacg ccgatcaagc tggcgccgaa aaccaacgtg
     1561 atcagatgaa tgcgctcgaa caagagccat gaacaaatcg acagcgcgcc cagacagccg
     1621 atcgccatgg agaatgtgac taaaataatc ggcttgagcg aatgaaacgt catccagatc
     1681 aagaatagta taccggccat cgagccggtg ccgatgatga acatttctcg ctgtgcttgg
     1741 ttcgccgcgg cggcggcgtg gagaataacg ccggcttgaa cgatctcaat ccgcttgctg
     1801 gtttgccaga cagcttgccg cgcttgctcg agcacgggca tgaccgcttg ctgtccggcg
     1861 agcgcgaacg ccggcacccg cagggtcagc ggcaagacga cataatggcg ctcgccggtg
     1921 ctgaccgata attcgccgcc acgcggccgc accggagttt cttgggcgcg cgccaatagc
     1981 caattattga acaagccgaa gggatcctct tgccacgcca gcggctgcgg cccggcgaag
     2041 gggctgtaca gtttcgccag ggcgcggtcg acccaataag acggcgcttg actgcgcagc
     2101 gccgcatcat cctcagacgt caacagcgtc agccggtgat ttttaaaggt ctccagccag
     2161 tcggtctcgg tgcgctcggt aatcgcttcg gcggcaaaaa gcaggtggcg gtatggcgcg
     2221 atagtctggc gatagacagc ggcggcccgc cgcgcgtcgt cccaatcggc cgcgccaatc
     2281 agcacgatga cgcgctgctc ggccgcctcg aacatctgcg gcaacgcccg ctgcaccacc
     2341 ggatcgcgcc ccatggccgg cagcagcgcg agaatattgg tgtcaggcac cagccgttgc
     2401 tgccaccaca gatagccatt gtgaatcaca accacggcaa ccaccgcggc ccacaaccag
     2461 ggaacccatt ggcgcggatt caagccgcat tcctcagttg aatttggcgt cgctgagcgc
     2521 agcgcaatgc tttcgtcacg gaggcaatcg attgtgcccc tgggtaagcc atcatcggcg
     2581 gcgcttggtg atgtttcacg ccatcatcgc gccggtctgc ccaaggtgaa tagaagaact
     2641 tgcagcagta cgcttggggg cctgcacaaa ttcgggatcg cccctcgctc aacaaccacg
     2701 aagcttgacc tgtaccatcc cgagtcaaaa tagtgccgcc tcttcgctgg tcatggcctg
     2761 cgcgccggtt tgcagcgaag agaaggcaat gcgcgtgcga tcgccgttgg cttcgtcgat
     2821 ggcgatgttc ttgacatagg cggcgccgtc cagagcgatg gcgccgatga ctttagccac
     2881 gccggcatcg cgcgctttga gcttgacgct ccaggcgccg tcgctaacgc tgccatcgac
     2941 atcgaaatgc ttttccaact ggccaagatc gccggccagc acggagaata ataggctgtt
     3001 gataatccgc accgtcggtt cctgcttggc attgaggcgc atggccagcc gctcgccttg
     3061 ccattgaacg atctcgtcgc gggtcagccg caaggtgttg gcgaacggtt gcaagctgcg
     3121 ccacaggacg cccttgtcgg cgaccacgca gaagcggccg tgggaacgta aaggattttt
     3181 caaaccggct aattgcttaa tctggtcgaa gcggccgcac agaactttgg gctgagccaa
     3241 gatcgcttga atctccgcca ccggcgcggc acccaacagc ggccagacca tcaggctcaa
     3301 acagattgcc agagtttttc gtttcatggc ggcgtgacac cgagtttttc aaacagcacc
     3361 ggcggcgaga caaagcacat ttctccggtg gcaagttcca ccgccacttg ggtggtgctg
     3421 gcccggccga ctctccggcc ggtggcgccg tcagtcaata ggtaagcgat cttcaagcgg
     3481 ttctcccatt cgacgatctc ggcgcgcagc ttgagccgct cggcaaattt ggccggggcg
     3541 atgtaacgga tatgcagatc gatcaccggc cagacatagc ccgacgcttt catctgcgga
     3601 tagttgtagt cgatcgagtt aagcaagacg ctgcggacga tttcgagata gttgacgtag
     3661 tggccatgcc aaacgatttc catgggatcg agatggttga actgcacctg ggtctcggtc
     3721 tcggcaaacc agcggctggg agttttactc ataaagtctt ctggttttgt ctggatggag
     3781 aaaagggatt tcaccacgga ggcacgaagg acacgaaggt ttcggatgac caaagctccg
     3841 aacttcgtgc tcttcgtact actatagttg acaatttccc cggctcgcgc aaattgtcgg
     3901 ggagccgaga cccctcggat tcggatattc ctcgcgccaa ggtcgctaag gtcgcaaagc
     3961 gacaggccag aggcctgtca tcctgagcga atgcgaaaat gtctaagagg gatttctctc
     4021 tccgttcgaa atgacaacgt tcctcctttg cgccctttgt gtattttgcg cgagatattc
     4081 cgagtttcgg ttgcggctgt accgtgccag gtccttcggg gtgaaaatat cttcgcatta
     4141 aacccggaat aacctaccga taaatcttcc atgcccggtc gcgcatccgc tcaagcagaa
     4201 gccgcaggtc cggttccaag cggcgatcct cctcgatcac agcgatgtcg ccactgagcg
     4261 cgtcgatcat ggtttggagc gacgggcttg gcgccagagc tggattcatt cgacagcgca
     4321 accaaacggc ctggcgcacc gtgatcaaca atccagcggc cacctgttcg gtcaattcca
     4381 acacccgcgt gcagtcgcgc gccgcgatgg tgcccatgct gaccttgtcc tggttgtggc
     4441 attccgtgga gcgggaaaat accgacgccg gcatagtcag cttgagcgct tccgcggtcc
     4501 acgccgagac gctgatctgc aacgccttga gaccatggtt gatcgccgcg cgcgggccgg
     4561 tgacgccgga aagattggcc ggcaagccgt tgctgtagcg gctgtcgacc aacaaggcca
     4621 tttgccggtc gagtagatcg gccaggttgg ccacggcgtt tttcatgctg tccatggcga
     4681 aggcgatgtg gccgccgtaa aaatggccgc catgcaacac ccgttcgctt acggcatcga
     4741 cgatcggatt gtcgttggcg ctgttcagtt cgttttcaat atacgagcgc agccacggca
     4801 gggcatcggc gagcacgccg atgacatggg gcgcgcagcg gatcgaatag cggtcctgca
     4861 accgtttgcc gttggcggcg gatggttgaa ccggtaaatc ttggcgcagc cagccagcca
     4921 ccaattgttg gccgggatgg ggtttgaccg aaaacagcgt cgcgtcgaaa tgctcggcgt
     4981 taccgtccat ggcgaaggac gccagcgcgc tgatgcgggt tgtcagtcgg gtgagatatt
     5041 cggcacgcac atagttcaag cagg
//
LOCUS       DATIRS010001187         2832 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1367932, whole genome shotgun sequence.
ACCESSION   DATIRS010001187 DATIRS010000000
VERSION     DATIRS010001187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2832)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2832)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2832
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1367932"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1328
                     /locus_tag="VLM90_15195"
     CDS             <1..1328
                     /locus_tag="VLM90_15195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14375.1"
                     /translation="RITDAEAAASRAPIPVDTRFAQEQIALAVREQTEALESAWQKKL
                     DGLQQEIREKAALLRLRDGELTDIRVQLAGVTKRLDYVAATPPSEVSASEREAERALW
                     QRDFDERLTARLREFGDETRDKLHGVTSAKVDQEQFRGETLALTARIAQLEQSHQNAS
                     AGAASEARDAYQATVALREEIAALKSTLFEQQGALPNEALVRSVEAMLREQIHEVHKQ
                     IAQHQRGTIEAENQFQELRGDIQTLIQRQVQAETFAQQTHALVTQETAQIRGAVKADM
                     AALDAQLNERRARDAALSGVEETVNVRLRELHNQVAQGMLALDRRDGELRELKTQLQT
                     LAQRVGDNGLPRPLASVSRPDGLTEGGAAAPLGEFAASVPPIDLRAVVTSGSMDGGAN
                     LLQPALSGDGLVIDPVNVPAVDLHNRLSAEIERKRAELREKSGRWKVRP"
     gene            1461..2159
                     /locus_tag="VLM90_15200"
     CDS             1461..2159
                     /locus_tag="VLM90_15200"
                     /inference="COORDINATES: protein motif:HMM:NF018455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HSQ14376.1"
                     /translation="MPTGIVELDALIEGGLRAGKTYLVVGEPGTGKSVFGLQFLVNGL
                     MEKEKGLYVAIDEKPADVLEQATSLGWDLAPFIESKEFVILDASAYFSSSSDTQKKID
                     VQRVVTDLNAYIARMGATRVVIDPVGPLLFNREATSRAPDQARTLFYGLQANGNTTNL
                     LTTYSVERNVRGLEEYLVAGTIVLGMELAKSRFVRTLTIEKMRSTALEPAQYLFKIVA
                     DRGIVLQGLSNAAG"
     gene            2204..2347
                     /locus_tag="VLM90_15205"
     CDS             2204..2347
                     /locus_tag="VLM90_15205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14377.1"
                     /translation="MKFRSWLIAHGLYFRHVLAPLIGAATLSRTSCTRVHLRLDVGET
                     PLA"
     gene            complement(2554..>2832)
                     /locus_tag="VLM90_15210"
     CDS             complement(2554..>2832)
                     /locus_tag="VLM90_15210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14378.1"
                     /translation="ASGIGNHDTPIEKNGDATCEEFPGVKSNFNCRQSFYPKIVRWMI
                     LKITGKSSERLSFESEVYRINGRSPWRAHWRATFRAPMASPNSRLKRK"
BASE COUNT          630 a          811 c          854 g          537 t
ORIGIN      
        1 aacgcatcac tgatgccgag gcggccgcaa gccgcgcacc tataccagtc gatacgcggt
       61 tcgcgcaaga gcaaattgcg ctagccgtgc gcgaacagac cgaagcgctg gaaagcgctt
      121 ggcaaaaaaa gctcgatggc ctgcaacagg aaatccgcga aaaagcggcg ttgctgcgcc
      181 tgcgcgatgg cgagctgacc gatatccggg tgcaactcgc cggcgtgaca aaacggcttg
      241 attatgtggc ggcaacgcca ccgtcggaag tcagtgcgag cgaacgggaa gcggagcggg
      301 cgctgtggca gcgcgacttt gacgaacgct tgaccgccag gttgcgcgag ttcggcgacg
      361 aaactcgcga caagctccat ggcgtcacca gcgccaaggt cgatcaagaa caatttcgcg
      421 gcgagaccct ggcattgacg gcgcgtatcg cccagctgga acagtcccat caaaacgcca
      481 gcgctggcgc ggcctccgaa gcacgcgacg cttatcaagc cacggtggct ttgcgagagg
      541 agatcgccgc attgaaatcc acattgttcg aacagcaagg cgcactgccc aatgaggccc
      601 tggtgcgcag cgtcgaagcg atgctacgcg agcaaatcca cgaagtgcat aagcagatcg
      661 cgcagcacca gcgcggtacc attgaagcgg aaaaccaatt ccaagaattg cgcggtgata
      721 tccagacgct gatacagcgc caagtccaag cggagacctt tgcccagcag actcatgcgc
      781 tggtgacgca agagacggcg cagattcgcg gcgctgtcaa agccgacatg gcggcgctcg
      841 acgcgcaatt gaacgaacgg cgcgcgcgcg atgccgcgct ttccggtgtg gaagagaccg
      901 tgaatgtgcg cctgcgcgag ctgcacaatc aggtggccca gggcatgttg gcgctcgacc
      961 gacgcgacgg tgagttgcgc gaactcaaaa ctcagctaca aactctcgct caacgggtcg
     1021 gcgataatgg tttgccgcgg ccgctggcgt cagtgagccg ccccgatgga ttgaccgagg
     1081 gcggcgcggc ggcgccgtta ggcgaattcg ctgccagtgt gccaccgatc gacctgcgcg
     1141 cggtggtaac ttctgggagc atggatggcg gggctaattt gcttcagccg gcgctgtccg
     1201 gcgacggcct cgtgatcgat ccggtcaatg tgccggccgt cgatttacat aaccgcttgt
     1261 ccgcggagat cgagcgcaaa cgcgccgagc tgcgcgaaaa gagcggccgc tggaaagtgc
     1321 ggccgtagcc gccgggccag gcgtggcgac cggcggccgc cgttgcgact ttcacgcgag
     1381 aagaaaatca ccggcgccgc accagataaa tttactgcaa ccgttcgaaa gaatgatggg
     1441 tcatggtcaa tagaaataga atgcccactg gcatcgtcga actcgatgcg ctgatcgaag
     1501 gcggtttgcg ggccggtaag acttatctcg tcgtcggtga gccgggcacg ggcaagtcgg
     1561 ttttcggatt gcagtttctt gtcaacggct tgatggaaaa agagaaagga ctctacgtcg
     1621 ccatcgacga aaagcccgcc gacgtgctcg aacaggcgac gtccttgggc tgggacctgg
     1681 cgccgtttat cgagtccaaa gaattcgtca ttctcgatgc ttcggcatac tttagcagca
     1741 gcagcgacac gcagaagaaa atcgacgtgc aacgcgtcgt caccgatctt aacgcataca
     1801 tcgcgcgcat gggcgccact cgcgtggtga tcgatccggt gggaccgctt ttgttcaacc
     1861 gcgaagcgac ctcgcgggcg ccggatcagg cgcgcacgct gttctacggc ctccaggcca
     1921 acggcaacac caccaatctc ctaaccacct attccgtcga acgcaatgtc cgcggtctcg
     1981 aggagtatct cgtcgccggc accatcgttc taggaatgga gttggccaag agccgcttcg
     2041 tgcgcacctt gaccatcgaa aaaatgcgca gcacggcgct ggagccggca cagtatttat
     2101 tcaaaatcgt tgccgaccgc ggcattgtcc tacaaggatt gagcaacgcc gccggctgac
     2161 caggttgccg cggccggatt gcctgtcata tagagagaga gccatgaaat tccgttcctg
     2221 gctgattgcg catgggttgt atttccgcca tgtcctggcg ccgctgatcg gcgccgctac
     2281 gttgtctcgt acgtcttgca ctcgcgtgca tctgcgattg gacgttggcg agacgccact
     2341 cgcctaagcg atgcagggct tgcagctaag ctacttcatg gatcgagacg ggccggttca
     2401 ggttcaagaa gcaggcagac tccgatgttt gccatttaat taattcgtct gcgcgtagcg
     2461 actcgaaggt gaaccagccg cacaggctag ttgcggtcaa agataattct cagacgcata
     2521 aaagagacat gaaagcgcca tcgtccggcg ccgtcatttg cgcttcaatc tagagttcgg
     2581 cgaagccatc ggtgctctaa acgtcgctcg ccaatgtgcg cgccatggtg accgaccatt
     2641 gattcggtat acttccgatt caaagctaag gcgctcgcta ctttttccgg tgatttttaa
     2701 gatcatccat cggacgattt taggatagaa ggattgtcga caattgaaat tagacttaac
     2761 accggggaat tcctcacaag tggcatcgcc atttttttca atgggcgtgt cgtggttgcc
     2821 gatacccgat gc
//
LOCUS       DATIRS010001188         1535 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1073405, whole genome shotgun sequence.
ACCESSION   DATIRS010001188 DATIRS010000000
VERSION     DATIRS010001188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1535
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1073405"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..390
                     /locus_tag="VLM90_15215"
     CDS             <1..390
                     /locus_tag="VLM90_15215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14379.1"
                     /translation="LQAKELILARLSSGVVSAEISVVECAGAEHTFGWVFQVSGGHAA
                     TGATLPRLVIVNKTSGQVVASRTEYEVEQFVRLYEKLLSQNQARSQGWCGTLPLPFPW
                     SLWRKRTVAERAKDGGFYEIGGKEGEP"
     gene            387..1385
                     /locus_tag="VLM90_15220"
     CDS             387..1385
                     /locus_tag="VLM90_15220"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14380.1"
                     /translation="MNRRLIACGVISAWMFLAAAAGAQDKKLERLRIGGGSTSATQMS
                     MWLAKEGGFYEKHGLSVEAISIPGSSLALQAMLAGELPIIQLGGAASIQANLSGADTV
                     IIASIIKKFLFWIYSRPEIGRIEDLKGKVFGTTRFGTLSDLASRFALRLHGIDPERDI
                     TMVQTGGPAETVVAIATGKIQAAALSPPATLQAKKAKLKELLDMSKLDAEYHINGLVT
                     TRKYIKTNDDTVRRFMRAYIEGAVRGQRDKSFSLRAMGKVFRTDDRELLDESYESIIK
                     NNFVVPPYPSVPGIASLLKGLEQTNPKAKTSKPEEHADSRIVREIEQSGFIKALQP"
BASE COUNT          338 a          410 c          472 g          315 t
ORIGIN      
        1 ctacaagcca aggagttgat tctggcgcgt ctaagttccg gcgttgtgtc cgccgaaatt
       61 tcagtcgtcg agtgtgccgg cgcggagcac actttcggtt gggtttttca agtgagcgga
      121 ggccatgccg caactggcgc aaccctgccg cggctggtga tcgtcaataa gacttcagga
      181 caagtggtcg cgagccgcac cgagtacgaa gtcgagcagt ttgtcagact ttatgaaaag
      241 ctgttgtcgc aaaaccaagc gcgcagtcag ggctggtgcg gcactctgcc gctgcctttc
      301 ccatggtcgt tgtggcgcaa acggacagtt gcggagcgcg ccaaggatgg cggtttctat
      361 gaaatcggcg gtaaggaggg cgagccatga atcgaaggtt gatcgcgtgc ggggttatct
      421 cggcttggat gtttctggcg gcggctgccg gggcgcaaga taagaagctc gaacggctgc
      481 gcatcggcgg cggatcgact tcagcgacgc agatgtcgat gtggttggcg aaagaaggcg
      541 gcttttatga aaagcatggg ctgagcgtcg aggcgattag cattcccggc agttcgctgg
      601 cgctgcaagc gatgctcgcc ggcgagctgc cgatcattca attgggtggc gcggcgtcga
      661 tccaggccaa tctgtcgggc gcggacactg tgatcatcgc ctcgatcatc aagaaatttc
      721 ttttttggat ttatagccgg ccggaaatag gccgcataga ggatctaaag ggcaaggttt
      781 tcggcaccac gcgctttggc actctgtccg acttggcttc tcgattcgca ttgcggcttc
      841 acggtatcga tccggagcgc gatatcacca tggtgcagac cggcgggccg gcggaaaccg
      901 tggtggcgat cgccaccggc aagatccaag cggcggcgct gagcccgccg gcgaccttgc
      961 aagcgaagaa agccaaactc aaagagctcc tcgacatgtc caagctcgat gccgagtatc
     1021 acatcaacgg cttggtgacg acgcgaaaat atatcaagac caacgatgac accgttaggc
     1081 gcttcatgcg cgcctacatc gaaggcgcgg tgcgcggcca gcgcgacaag agtttttcct
     1141 tgcgagccat gggcaaagtg tttcgcaccg acgaccgcga gctattggac gagagctacg
     1201 aatcgattat caaaaacaac ttcgtcgtgc cgccctatcc gtcggtgccg gggatcgcca
     1261 gtctgctcaa aggtttggaa cagaccaatc cgaaagcgaa gacctcgaag ccggaggagc
     1321 atgccgattc gcgcatcgtg cgcgagatcg agcagagcgg atttataaag gcgctacagc
     1381 cgtagcgccg ttcgaatcgt tcaaaaagtt caagccgttc aaccgctgcg ctccgttcaa
     1441 accgttggaa cctccgaaaa cgttttgaac ggcttgaacg ttttgaacga tttgaacggc
     1501 gctacggctg tagcgccttt ataaatccac tctgc
//
LOCUS       DATIRS010001189         1595 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_483165, whole genome shotgun sequence.
ACCESSION   DATIRS010001189 DATIRS010000000
VERSION     DATIRS010001189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1595)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1595)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1595
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_483165"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..468
                     /gene="greA"
                     /locus_tag="VLM90_15225"
     CDS             <1..468
                     /gene="greA"
                     /locus_tag="VLM90_15225"
                     /inference="COORDINATES: protein motif:HMM:NF001264.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HSQ14381.1"
                     /translation="VPMTSKGFQFLMEELKRLKSVERPKNIRDIEEARDHGDLSENAE
                     FHAAKERQSLLDFQIREMEDKIARAQVIDVSKLSGDKVLFGATVSLADGDTGDKVVYK
                     IVGDHEAEPKNGRISVSSPIARALIGKSEGDEVQVRTPTGVRSFEVLGVEFID"
     gene            510..>1595
                     /locus_tag="VLM90_15230"
     CDS             510..>1595
                     /locus_tag="VLM90_15230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14382.1"
                     /translation="MPFSAAQAAAKPYLRRCPTAFFIYIYFNRLSAPARAGAACSILI
                     FLLAALPVLPAGAEITIDARVGFHGVFQLGRPFPLEVEIANSGRPAEGTLDVQVWKGG
                     ATKGGTPYPVKYRREVFLAAQSRKTLQLTVDPDFVSRPLSIAFSSSTAKAVREIDLRR
                     NFSPAPVILLVNDSGSMPAIALGPTPQSRLVSVSLSELAADARALLGVSHIIFYDQSL
                     RDLSRPQVLALDTWLSAGGRMVILGSLNYALYQEPVMSRFLPVRVSGARRIAFAPATG
                     KSETAPAIADVWAQVSAPLNGEVRATSQGVLVLVEAARGRGRIIYLSLDVGRPPLSHW
                     PGLPKLLQSLLAAGGADEPGARAEWNDM"
BASE COUNT          276 a          465 c          515 g          339 t
ORIGIN      
        1 gtcccgatga ccagcaaggg gttccagttt ttgatggagg agctcaagcg cttaaagagc
       61 gtcgagcggc cgaagaacat ccgtgacatc gaagaggcgc gcgatcacgg cgacctctcg
      121 gaaaacgccg agtttcacgc cgccaaggag cgccagtcct tgctcgattt ccagatccgc
      181 gagatggaag ataagatcgc ccgcgcccag gtcatcgacg tttccaaatt gtcaggggac
      241 aaagttctct tcggcgcgac ggtcagtttg gcggatggcg ataccgggga caaggtggta
      301 tacaaaatcg tcggcgatca cgaggcggag ccgaagaacg gtcggatttc tgtcagttct
      361 cccatcgcgc gcgcgttgat cggcaagagc gagggagatg aagttcaggt tcgcactccc
      421 acgggcgttc gctcgtttga agttcttggc gtcgaattta tcgactaggt tgccggtgcc
      481 agtggggcga gcctgtctgg aagggaaaga tgcccttttc agccgcacag gctgctgcga
      541 aaccttatct acggcggtgt cccaccgcgt ttttcattta catttatttt aatcggttgt
      601 ctgcgccggc gcgggccggc gccgcatgct cgattctaat atttctgctc gcggcgttgc
      661 cggtgcttcc ggccggggcg gagatcacca tcgatgcgcg ggtcggtttc cacggcgtct
      721 ttcaactggg ccggcctttc ccgttggagg tcgagatcgc caactcaggc cgcccggctg
      781 agggaacgct tgatgtgcaa gtgtggaagg gcggcgcgac caagggcggc acgccctatc
      841 cggtcaaata ccggcgcgaa gtttttcttg ccgcgcaatc gcgcaagacc ctgcaattga
      901 ccgtcgaccc tgactttgtc agccggccgc tgtcgattgc ttttagcagt tccaccgcta
      961 aagcagtgcg cgaaatcgac ttgcggcgca acttttcgcc ggcaccggtg atcctgctgg
     1021 ttaacgacag cggctcgatg ccggccattg cgcttgggcc gacgccgcag agccggctgg
     1081 tgtcggtttc cttgagcgaa ctcgccgccg acgcgcgcgc gttgctcggt gtttcccata
     1141 ttatttttta cgatcaatcg ctgcgcgatt tgtcgcggcc gcaggtgctt gccctcgata
     1201 catggctcag cgccggtggt cggatggtga ttctcggcag cctcaattac gcgctctacc
     1261 aggagccggt aatgagcagg tttttacccg tgcgggtcag cggcgcgcgg cgcatcgcct
     1321 ttgctcccgc aacgggcaag agtgaaacag ctccggccat cgccgatgtc tgggcacaag
     1381 tatcggcgcc gttgaacggc gaggtgcgcg cgacctccca gggcgtgctg gtgctggtcg
     1441 aggcggcgcg cggccgtggc aggattatat acctctcgct cgatgtcggc cgcccgcctt
     1501 tatcccactg gccgggcttg ccgaagttgt tgcaaagctt gctcgcggcc ggcggcgccg
     1561 acgagccggg tgcgcgggcg gagtggaatg acatg
//
LOCUS       DATIRS010001190         2954 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_777974, whole genome shotgun sequence.
ACCESSION   DATIRS010001190 DATIRS010000000
VERSION     DATIRS010001190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2954)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2954)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2954
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_777974"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..419
                     /locus_tag="VLM90_15235"
     CDS             <1..419
                     /locus_tag="VLM90_15235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14383.1"
                     /translation="IRGKRVLLIEDGPTLTHGEMAYGSGSVAAHRYGAAAVVDPKPFA
                     RGSLIETFQRFPWVQRSLPAMGYSQAQLDDLAATIAAVDCDTVVIATPVDLARLIPLD
                     KPFCRVRYDLEEISRPDLTDVVTGFLSAHAARMRRG"
     gene            519..>2954
                     /locus_tag="VLM90_15240"
     CDS             519..>2954
                     /locus_tag="VLM90_15240"
                     /EC_number="7.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015662 - P-type ion transporter activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0019829 - ATPase-coupled monoatomic cation
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation-translocating P-type ATPase"
                     /protein_id="HSQ14384.1"
                     /translation="MNNQFNDTTPSGLSTKEVDERLRVHGYNELPSSNRRGTFAIALS
                     VAREPMFSLLIVASIIYLTLGDLREALILAASIFVIMAITIFQERKTERALEALRDFS
                     SPRALVIRNGEQKRIAGREVVPDDILLLTEGDRVPADAVILSCNDLAVDESLLTGESV
                     PVRKAAWDGKQQIARPGGDDLPFVYSGTMLVQGRGVARVHATGTRTEIGKIGKALQTL
                     ETDETFLQKKSARLIRNLAAVGLSLCALAVTLYGLTRGNWLQGFLVGIALAMALLPEE
                     IPVVLTVFLALGAWRMSQKRVLTRHMPAIETLGSATVLCVDKTGTLTLNRMSVSKLFA
                     GGDFYDVDTNHDKTLPEKFHDLVRFSVLASKTDPFDPMEKAFKELGDRQLDHGAIFED
                     WTLAHEYSLAPDLLALSHVWQSSRSEQYAIATKGAPEAVADLCHFDPEQRTELAAQVD
                     NLAADGLRVLGVAHGAFTGSTWPVSQHDFDFKFLGLIGLSDPVRPAVPAAIQACNQAG
                     IKVVMITGDYPSTAQAIAHKIGLDSGSEILVGADIERMPEGELRRRIGDTHIFARVLP
                     EQKLKLVQAFKANGEIVAMTGDGVNDAPALKAAHIGIAMGGRGTDVAREAASLVVLDD
                     DFATIVDAIRSGRRIFDNLQKALGFIFSIHVPIAGLALAPLILDWPIVLSPVHIVFLE
                     LIIDPACSIAFEAEPEELDVMNRPPREPNAPLFGMGQIAFSLFEGFISLLAVLLVFGF
                     YYYLGYGEAKVRTVTFATLVVGMLGLIFVNRSRSQNLWRTLRLPNAAVWWVVGGALSF
                     LAGVIYIPQAREIF"
BASE COUNT          573 a          905 c          824 g          652 t
ORIGIN      
        1 tcattcgcgg caaacgagtg ctcttgatcg aagacggccc caccctcacc cacggcgaga
       61 tggcctacgg ctccggcagc gtcgcggcgc accgctacgg cgcggcggcc gtcgtcgatc
      121 cgaaaccatt tgcgcgaggc agtttgatcg aaacgttcca gcgttttccc tgggtgcaaa
      181 gatcgctccc ggccatgggc tattctcagg cacagctcga cgacctcgca gcgacgatcg
      241 ccgcggtcga ttgcgatacg gtcgtgatcg cgactccggt ggatctggcc cggctgattc
      301 cgctcgacaa gccgttctgc cgcgtccgct acgacttgga ggaaatcagc cgccccgatc
      361 tcaccgatgt cgtaaccggc tttctcagcg ctcacgccgc ccgcatgcgg cgcggctagt
      421 caaacatgaa cgtcgtgcgg gtttgccatg agtcggaaca cctccaagga ctatcctcgg
      481 ccgagcccaa gcccgtctcc agcaggttgg ttacaacgat gaataaccag tttaacgata
      541 cgacgcccag cggactttcg accaaagaag tcgatgagcg acttcgggtc cacggttaca
      601 acgaactgcc ctcctctaac cgccgcggca ccttcgccat cgcgcttagc gttgcgcgcg
      661 agccgatgtt ttcgctgctc atcgtcgcca gcattatcta cttgactctc ggcgacttgc
      721 gggaagcgct cattctcgct gcttcgatct ttgtcatcat ggcgatcacg atttttcaag
      781 agcgaaaaac cgagcgggcg ctggaggcgc tacgagattt ttctagtccg cgcgcgctcg
      841 ttatccgcaa cggcgaacag aaacgcatcg ccggccggga ggtcgtgccc gacgatattt
      901 tgctgctcac cgaaggtgac cgcgttcccg ctgacgccgt tatcttgtct tgcaatgatc
      961 tagcggtgga cgaatccttg ctcacggggg aatccgtgcc ggtgcgcaag gcggcctggg
     1021 acggaaagca gcaaatcgct cgccccggcg gcgatgattt acccttcgta tattccggca
     1081 ccatgctcgt tcagggccgt ggcgtcgcca gagttcatgc gaccggcacg cgaacggaaa
     1141 tcggcaaaat cggcaaggcg ctgcaaacgc tggaaaccga cgagaccttc ctacaaaaga
     1201 aatccgccag actcatccgt aacttagccg cggtggggct ctcactctgc gccttggcgg
     1261 ttactctcta tgggttaacg cgcggcaatt ggctccaagg attcctggtc ggtatcgccc
     1321 tcgccatggc tctgctccct gaagaaattc ccgtcgtgct caccgtgttt ctcgcgctcg
     1381 gtgcttggcg catgtcgcag aaacgagttc tcacccggca catgccggcc atcgaaactc
     1441 tcggttcggc aaccgttctg tgcgtcgaca agaccggcac gctgaccctc aatcgcatgt
     1501 cagtaagcaa actcttcgcc ggcggggatt tctatgacgt ggacacaaac catgacaaaa
     1561 ctttgcctga gaagtttcac gacctcgtgc gtttctcggt tctcgccagc aagaccgatc
     1621 ctttcgaccc gatggaaaag gctttcaagg aactcggtga ccgccaactc gatcacggcg
     1681 cgatttttga agattggacc ctggcgcacg agtactctct cgcaccggac cttctagcac
     1741 tctctcatgt ttggcaatca tcacgcagcg aacagtacgc aattgccacc aagggcgccc
     1801 cggaagccgt tgcggatctt tgtcactttg atccagaaca acgcaccgag ttagcggcgc
     1861 aggtcgacaa cctagcggcg gacggcctgc gggttcttgg tgtggcacac ggagctttta
     1921 ccggcagcac atggcctgtt agccagcatg atttcgattt caagtttctc ggactcatcg
     1981 gcctatccga tcccgtgcgg cctgcggttc cggccgcaat ccaggcgtgt aaccaggcgg
     2041 gaatcaaagt tgtcatgatt accggtgact atccctccac cgcgcaggcc atagcgcata
     2101 agatcggtct ggattcgggg agcgagattc ttgtcggcgc cgacatcgaa cgaatgcctg
     2161 aaggcgaact acgccgccgc atcggcgaca cgcatatctt cgcccgcgtt ctacccgaac
     2221 aaaaattgaa actggtgcag gcgttcaaag ccaatggcga gatcgtggcg atgaccggcg
     2281 acggcgtcaa cgacgcgcca gcgctaaagg ccgcgcatat cggtatcgcc atgggcgggc
     2341 gcggcacgga cgtggcacgc gaggcagctt cactcgtcgt actcgacgac gacttcgcca
     2401 ccatcgttga tgcgattcgc tcgggccggc gcatttttga taatcttcag aaagccctcg
     2461 ggttcatttt ctccatccat gtgccgatcg ccggcttggc gctggcgcca ttgattctcg
     2521 actggccgat cgtgctctcc ccagttcaca ttgtttttct tgaactgatc attgatcccg
     2581 cctgttcgat tgcctttgaa gccgagccgg aagaattgga tgtcatgaac cgtccgccgc
     2641 gcgaacccaa tgcgccgctt tttggcatgg gccaaatcgc ttttagccta ttcgaaggat
     2701 tcatcagctt gctggccgtg ctcctggttt ttggattcta ttattacctc ggctatggtg
     2761 aagcgaaggt gcgcacggtc acgttcgcaa ccttggtggt cggaatgctg gggctgattt
     2821 tcgtcaatcg ctcgcgctcg cagaatctct ggcgcactct tcgtttgccg aatgccgccg
     2881 tctggtgggt tgttggggga gcgttgagct ttctcgccgg agtgatttac attccccaag
     2941 cgcgtgagat attt
//
LOCUS       DATIRS010001191         2403 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_89004, whole genome shotgun sequence.
ACCESSION   DATIRS010001191 DATIRS010000000
VERSION     DATIRS010001191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2403
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89004"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..297
                     /locus_tag="VLM90_15245"
     CDS             <1..297
                     /locus_tag="VLM90_15245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14385.1"
                     /translation="SETARLLEHMGIKTAVMVSDVARDRRVESALLFNVPEVNAIVYN
                     GGNGTEYEIPKAARVIAAKPELAALLAGPMTIDANNIIGVTNQQGASRMRSLVY"
     gene            388..1671
                     /locus_tag="VLM90_15250"
     CDS             388..1671
                     /locus_tag="VLM90_15250"
                     /inference="COORDINATES: protein motif:HMM:TIGR01918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:1426..1428,aa:Sec)
                     /transl_table=11
                     /product="glycine/betaine/sarcosine/D-proline family
                     reductase selenoprotein B"
                     /protein_id="HSQ14386.1"
                     /translation="MKIVYYVNQFFGGIGAEEHAGASLEFRDGALGPAKLFEQLMGND
                     ATVTMTIVCGDNHAVEHQDQVTAAVLDKVRASGADLFAAGPCFDAGRYGMAAGAICSA
                     IQCELGIPAITAMHVENPGVDLFREQLHIVDSGTSIAKMRDIVATMAKLGKKLVAKQP
                     IGLPAEEGYISRGLLRDQLGDKTAATRMIDMLIAKMNGEKFDSEMLPNAFAPVPMPAR
                     IKDMSKAKLMVITDGGLVPKGNPDKIEGTAATRWGAYNIAGSDDLRSEDYEVSHGGYD
                     TRFVQDDPDRLVPLDALRELEKSGVIGKLHEEFLSTCGRSNPLSNTRRLGREMVEKIK
                     RDGVDAVILTSTUGTSTRSGAAITTELEKAGIPVVQITSALPIAKMVGSNRVVLGTGI
                     VHVTGDAKLPLKDEKDLRRKLVQQALDALQSNEKQ"
     gene            complement(2152..>2403)
                     /locus_tag="VLM90_15255"
     CDS             complement(2152..>2403)
                     /locus_tag="VLM90_15255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14387.1"
                     /translation="PLLGIDPGNMYKAIRTVGPERCTLSSDAGEPLFPNSVESLRLLR
                     GHMSAFGCTDDEIYTMCTVNPAFIVGLEVPRQQQAHAAH"
BASE COUNT          538 a          717 c          686 g          462 t
ORIGIN      
        1 tcggagaccg cgcgcttgtt ggaacatatg ggcatcaaaa ccgccgtcat ggtttccgac
       61 gtcgcgcgcg accggcgcgt cgagtcggcg ctcttgttca acgtcccgga agtcaacgcc
      121 attgtctaca acggcggcaa cggcaccgaa tatgaaatcc ccaaagccgc ccgcgtcatc
      181 gccgccaaac cggagctggc cgcgctgctt gccgggccca tgacgatcga tgccaacaac
      241 atcatcggcg tcaccaacca gcagggcgcg tcgcgaatga gatcgttagt gtattgaagc
      301 aggcatttat tctttcgaca taaccattca cctggaacga ccggaaggca tcaccacaga
      361 agcacagata tcccagagga gttactcatg aagatcgtct actacgtcaa tcaatttttc
      421 ggcggcatcg gcgcggaaga gcatgccggc gcatcactgg aatttcgcga cggcgcattg
      481 gggccggcga agctgttcga acagctcatg ggcaatgatg cgacggtaac catgacgatc
      541 gtttgcggtg acaatcacgc cgtcgaacat caggaccagg tcaccgcggc cgtgctggac
      601 aaggttcgcg ccagcggcgc ggatctcttc gccgccggcc cctgcttcga tgccggccgt
      661 tacggcatgg ccgccggcgc aatctgcagc gccatacagt gcgagttggg aattcccgcg
      721 atcacggcga tgcatgtgga gaatcccggt gtcgatcttt tccgcgagca gcttcatatc
      781 gtcgactcgg gcaccagtat cgccaaaatg cgcgatatcg tcgcgaccat ggcgaagctc
      841 ggcaagaaac tcgtcgccaa gcaacccatc ggcctgccgg ccgaggaagg ctatatcagc
      901 cgcggcctgc tgcgcgatca actcggcgac aaaaccgcgg ccacgcgcat gatcgatatg
      961 ctcatcgcca agatgaacgg cgaaaagttc gattccgaaa tgctgccgaa cgcgttcgcg
     1021 cccgtgccga tgcccgcgcg gattaaagac atgtcgaaag ccaagctgat ggttatcacc
     1081 gacggcgggc tcgtgcccaa gggtaatccg gacaaaatcg aaggcaccgc ggcgacccgt
     1141 tggggcgcct ataacatcgc aggcagcgat gatttacgca gcgaggacta cgaagtctct
     1201 cacggcggct acgatacgcg attcgtccag gacgatcccg accgtttggt gcccctcgac
     1261 gccctgcgcg agttggaaaa gagcggcgtc atcggcaaac tgcacgagga gtttctctcc
     1321 acctgcggcc gttccaatcc gctctcgaac acccgccgac tggggcggga aatggtggaa
     1381 aaaatcaagc gcgacggcgt cgacgcggtg atcctcacgt caacttgagg caccagcact
     1441 cgcagcggcg ctgcgatcac caccgaactc gaaaaggccg gcatcccggt cgtgcaaatc
     1501 acctccgcgc tgccgatcgc caaaatggtc ggctccaacc gggtcgtttt aggcactgga
     1561 attgtccatg tgaccggcga cgccaagctg ccgctgaagg atgaaaaaga tctgcgccgc
     1621 aagctcgtcc aacaagccct cgacgcgctg cagtcgaacg agaaacagtg aaataaaagg
     1681 gcgggtttaa aagccgtccc taccagtccc aattcttttt gtaccctttg cactgcaata
     1741 gctcaaagat tgcgtggctt gcacaaattt tccataccgg tattcgtaag ttgccgtgct
     1801 caatggagaa acccaatctc accacgaagt gttcatgagc tcacgctcgc ctacagagca
     1861 tgaaaatggt tggcattccc agaacatgct cccctgctcg attcgtcatt cccgcgcacg
     1921 cgggaatcca ggtttgtttt gcgccgaatt agcctggata cccgctttcg cgggtatgac
     1981 gggacccagg tgacctcttc gttgtggaga ccctcccctt acatgtattt tcgaaggagg
     2041 cacgaagagc acgaagttcg gagtttataa ttatccgaga ccttcgtgtc cttcgtgcct
     2101 tcgtggtgag atcgaatttt atgtccagct gcaaaagttc aaagtgattc gttaatgcgc
     2161 ggcgtgcgct tgctgctgcc taggcacttc gagaccgacg atgaatgccg ggttcacggt
     2221 acacatggtg tagatctcgt cgtcggtgca gccgaaggcc gacatgtggc cgcgcaagag
     2281 gcgcagcgat tccaccgagt tgggaaacag cggctcgccg gcgtcggacg acagggtgca
     2341 gcgctcgggg ccgacagtgc gaatcgcttt gtacatattg cccggatcga tgccgagcag
     2401 cgg
//
LOCUS       DATIRS010001192         2384 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_974306, whole genome shotgun sequence.
ACCESSION   DATIRS010001192 DATIRS010000000
VERSION     DATIRS010001192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2384)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2384)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2384
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_974306"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..962)
                     /locus_tag="VLM90_15260"
     CDS             complement(<1..962)
                     /locus_tag="VLM90_15260"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14388.1"
                     /translation="MKLSTKLAQVVFTTLLAAQACVSKSFSAEAPNIRIVYNALGGSM
                     APLWLGQELGLFAKHGLQHSLNYLAATTSVQAIVAGSEDIGMVGNQCIDVALEGADTI
                     YVAGNINRFVFHLYGDPAIKTVQDLKGKTVAATQAAASTDYATRIVLRRYGLIPDKDV
                     KILFTGSMPALVTTVKSGNAAAGLMSAPTTIQALELGMKPILNVTELNIPFVFVGVCT
                     TRKIIQQKPDHISRFLRAYIEALAIIRNDKETTFKAMGKFLKTDNRQVLESIYDDYGS
                     AYQRVPLMTRQEVQAVLDVVKSPRGVQAKPEVFYDNSFVQKIEAS"
     gene            complement(1073..>2384)
                     /locus_tag="VLM90_15265"
     CDS             complement(1073..>2384)
                     /locus_tag="VLM90_15265"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ14389.1"
                     /translation="TTTFNTAFSTIQWTILVYDLVLIGLIITMGRLGDMFGRRRFYTL
                     GFLIFVTASAICGLTQTTGQLIFFRAVQAIGGSMIAANGRAIVSVNLPAEERGRALGL
                     TSTAFHIGFLTGPALGGFLIDSLGWRWIFYINMPFSLAGAYLAWKVVPETRMQGKTSV
                     DIAGAVLLLLTNGLFIYAIDQLPRVGWRHPAFFLTLALAAIALVFLLRAEARAKLPIL
                     VLSMFRARLFSAGIASLFVLAATLSAINFLLPFYLQSLLGYSASQTGWIIVADSVIIM
                     VMAPIAGALSDRLGSRLLCTLGCLVVAIAQFLLASLDLHAPLLRIMLPLVLWGIGWSL
                     FNAPNQRSILGAVATDKIGAAAGMIATSARTGGAMGVALSATLFGYLLAGAGLTANQV
                     NSPNSWRAAPEVFMSSFSTTIYALGIFTLLAVFSSAVRGTRKEN"
BASE COUNT          544 a          638 c          758 g          444 t
ORIGIN      
        1 gaggcttcga tcttttgcac gaaggagttg tcgtaaaata cttcgggctt ggcctggaca
       61 cccctggggc tttttacgac atcgaggacc gcctggactt cctggcgggt catcagcggc
      121 acgcgttgat aggcgctgcc gtagtcgtcg tagatgcttt ccaagacttg ccggttgtcg
      181 gtctttaaga acttgcccat ggctttgaac gtggtttctt tgtcgttgcg aatgatcgcc
      241 agagcttcga tataggcgcg gagaaaccgg ctgatgtggt cgggtttctg ctggattatt
      301 tttcgtgtcg tacagacgcc gacaaagaca aaggggatgt ttagctcggt gacgttgagg
      361 atcggtttca tacccaactc gagggcttga atcgtcgtcg gcgcggacat caggccggcg
      421 gcggcattgc cggacttcac cgtcgtcacc agcgccggca tgctgccggt gaagagaatt
      481 tttacatcct tgtcaggaat caaaccgtaa cggcgcagga cgatgcgggt cgcatagtcg
      541 gtggaggccg cggcttgggt ggccgcgacg gttttgcctt tgagatcctg cacggttttg
      601 atcgccggat cgccgtacag gtggaagaca aagcgattga tgttgccggc gacgtagatg
      661 gtgtcggcgc cttcgagggc gacatcgatg cattgattgc cgaccatgcc gatgtcctcg
      721 ctgccggcga cgatcgcctg caccgaagtc gtcgcggcca agtaattcag gctatgttgc
      781 aggccatgtt tggcgaacaa gcccaactct tggcccaacc acagcggcgc catggaaccg
      841 ccgagggcgt tgtagacgat gcggatgttt ggcgcttcgg cagagaatga cttagacacg
      901 catgcttgag cggcgagcaa tgtcgtgaac actacctggg cgagctttgt cgacaatttc
      961 attatgcctc cccgagcgaa ctatcgagcg gagagtagga gagccggcgg gctggtgtca
     1021 agggaactgg ccgcacaaaa tcgatcaaga ccctgaattt gttgttgcgc ggtcaatttt
     1081 ctttgcgtgt gccgcggact gcggatgaaa acactgcgag taaggtgaaa atacccaaag
     1141 cgtagatcgt cgtcgagaaa gaactcataa aaacctccgg cgcggcgcgc cagctgttgg
     1201 gagagttcac ttgattagcg gttaagccgg cgccggccag gaggtagccg aacaaagtcg
     1261 ccgatagagc cacacccatg gcgccgccgg tgcgcgcgct ggtagcgatc ataccggcgg
     1321 cggcgccgat tttatccgtc gccacggcgc ctaaaatcga ccgttgattg ggcgcgttga
     1381 agagcgacca gccgatgccc caaagcacca gcggcagcat gatgcgcagc agcggcgcat
     1441 gcaggtcgag ggatgccaac aggaactgcg cgatggcaac gaccaaacag ccgagggtgc
     1501 aaagcaggcg cgagccgaga cgatccgata gcgcgccggc gatgggcgcc atcaccatga
     1561 tgatcaccga gtcggcgacg atgatccagc cggtctgcga agccgagtag ccgagcaggc
     1621 tttgcaaata aaatggcagg agaaaattaa ttgccgacag agtggcggca agcacgaaca
     1681 agctggcgat gccggcgctg aacagccggg cgcgaaacat cgacagcacc agaatcggca
     1741 gcttggcgcg ggcttcggcg cgtaggagaa agaccagggc gatggcggcc agcgctaggg
     1801 tcagaaaaaa cgccggatgg cgccagccga cccgcggcaa ttgatcgatg gcgtagatga
     1861 acaagccatt ggtcaataac agcagcaccg cgccggcgat atccaccgag gttttgccct
     1921 gcatgcgcgt ctcggggacg accttccaag ctaaataagc gccggccagg ctaaacggca
     1981 tgttgatata aaaaatccag cgccagccga gactgtcgat caagaatccg ccgagtgcgg
     2041 ggccggtgag aaagccgata tgaaacgccg tcgacgtgag tcccagggcg cggccccgtt
     2101 cttcagcggg caagtttacc gacacgatgg cgcggccgtt ggcggcgatc atcgagccgc
     2161 cgatggcctg aaccgcgcgg aaaaaaatta gctggccggt ggtttgggtc aagccgcaga
     2221 tcgctgacgc agtgacgaaa attaaaaatc ccagagtata gaagcgccgc cggccgaaca
     2281 tatcgcccaa acgccccatg gtgatgatca agccgattaa aaccagatcg tagaccagga
     2341 tggtccactg gatggtgctg aaggcggtat taaacgtcgt cgtc
//
LOCUS       DATIRS010001193         1549 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1073732, whole genome shotgun sequence.
ACCESSION   DATIRS010001193 DATIRS010000000
VERSION     DATIRS010001193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1549
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1073732"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(109..>1549)
                     /gene="fliF"
                     /locus_tag="VLM90_15270"
     CDS             complement(109..>1549)
                     /gene="fliF"
                     /locus_tag="VLM90_15270"
                     /inference="COORDINATES: protein motif:HMM:TIGR00206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009431 - bacterial-type flagellum basal
                     body, MS ring [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="flagellar basal-body MS-ring/collar protein
                     FliF"
                     /protein_id="HSQ14390.1"
                     /translation="DGSAVVKELDAAKIPYAITNGGTVIEVPRGVLYQTRLKLAGKGI
                     PAGGGVGFEIFEKNQFGASEFTQQVNFLRAQQGELSRTINSITAVQSSRIHLAIPSRT
                     NFLGPEEKPSASVVVELRPGYHLSPDQVQGIVNLVAGSVPKLSSDKVTVIDGSGRPLK
                     EIVVAVASTEAEKVAALKLKHETELQRRVETMLDPVLGAGKVIVRANVQISLQETLMT
                     KEEFDPDNKVVRSQRQSSDDSGAKGGNPGVQANLPGGDATKANDGGAKRSSEMTTYEI
                     GRTTSRIMEPRGQIQKLSVAVMVDGKYDKEKYLARSAEEMEVIKGIVKRAVGFDTERG
                     DEIEIANVPFKIQPASPLNPLVAPTLKDMAQTPMGMAAGGGALLVLGALAFFMLRRKK
                     PAMSAAEPAAEVAVLPTEPSASAAAMQEEVAAAAQKIIVSEDPRKEQLSQIAHDYHDA
                     SVRIIRTWLQEDAAKARAAATSGGIIANP"
BASE COUNT          250 a          487 c          460 g          352 t
ORIGIN      
        1 atggcgccgg cgagctcttc gccgaccaag gccaagaaaa tcgccgcctt ctcgggaccg
       61 gttaaagttg gttttttctt cgctctgccg tcgtcagcca tatttcactt acgggtttgc
      121 aatgatgccg ccactagtcg cggccgcacg agccttcgcc gcgtcctctt gcaaccaggt
      181 tcgaatgatc cgtaccgagg cgtcatgata gtcatgggcg atctgcgaca actgctcttt
      241 gcgcggatct tccgacacga tgatcttttg cgccgctgcc gccacctctt cctgcattgc
      301 cgccgcgctg gcggagggtt cggtcggcaa cacggccacc tccgccgccg gttcggcggc
      361 gctcatcgcc ggttttttac gccggagcat gaagaaggcc aaggcgccca ataccaagag
      421 cgcgccaccg ccggcggcca tgcccattgg cgtttgcgcc atatccttca aggtcggtgc
      481 caccagcgga ttgagcgggc tcgccggttg gatcttaaac ggcacattgg cgatttcgat
      541 ctcatcgcca cgctcggtgt caaagccgac ggcgcgcttg acaatcccct tgatgacttc
      601 catctcttcg gcgctgcgcg cgagatactt ttccttgtcg tatttgccgt cgaccatgac
      661 ggccaccgag agcttctgga tctggccgcg cggctccatg atccggctgg tggtgcgtcc
      721 gatttcgtag gtggtcattt cgctgctgcg tttcgcgccg ccgtcattgg ctttggtggc
      781 gtcgccgcca ggcaagttgg cttggacgcc gggattgcca cccttggcgc cactgtcgtc
      841 gctcgattgg cgctggctgc gcacgacttt attgtccgga tcgaactctt ctttagtcat
      901 cagggtttcc tgaagactga tctgcacgtt ggcgcggacg atcactttgc cggcgccgag
      961 caccgggtcg agcatggttt cgacccgccg ttgcaactcg gtttcatgct tgagcttgag
     1021 cgcggcgact ttttccgcct cggtgctggc cacggccacg acgatttctt tgagcggacg
     1081 cccagagcca tcgatgaccg tgaccttgtc gctgctgagc ttgggcaccg aaccggcgac
     1141 cagattgacg atgccctgaa cctgatcggg actgaggtgg taacccggcc gcagttcgac
     1201 gaccaccgat gccgaaggtt tctcttccgg accgaggaag ttcgtgcgcg acgggatcgc
     1261 caggtggatc cggctcgact gcaccgcggt gatcgaattg atcgtccgcg ataactcgcc
     1321 ctgctgggcg cgcagaaaat tgacctgctg agtaaattcg ctggcgccga attggttttt
     1381 ttcaaagatc tcaaaaccca cgccgccacc ggcgggtatg cctttgccgg cgagcttcaa
     1441 gcgcgtctgg tagagcacgc cgcgcggcac ttcaatgacc gtgccgccgt tggtgatcgc
     1501 gtacggaatc ttggcggcat cgagttcctt gaccacggcg gaaccgtcc
//
LOCUS       DATIRS010001194         1528 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_384908, whole genome shotgun sequence.
ACCESSION   DATIRS010001194 DATIRS010000000
VERSION     DATIRS010001194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1528
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_384908"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1220
                     /locus_tag="VLM90_15275"
     CDS             <1..1220
                     /locus_tag="VLM90_15275"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HSQ14391.1"
                     /translation="LKQSELGALLCFDMNNIRYITATHIGTWAMDKLVRFSLLPQDDE
                     PILWDFGSAARHHQIYSPWLGERSRAGISTLRGATHPGSGLADDVAKKIKLELEMRNL
                     QNEPVGVDVIEMPVLFALQAQGIKVVDGQQLMHEVRKIKTQDEITLLNTATMMVDAAY
                     DELYRFMKPGVKENECVGVVSKVLYDLGSEHVEGVNAISGERCSPHPHVYTDRVLRPG
                     DPAFFDILHSFNGYRTCYYRTFAIGSASPAMVDAYKRSRDYMDAAISIVKPGITTADV
                     VKLWPKAQEFGFANEEAAFALQYGHGVGLSIWEKPIFSRLVSLDHPEVIEEGMVFALE
                     TYWPAADGWSAARLEEEVVVTKDGCELITRFPSEKLLVAGTHYFTTGGELPTTRETQS
                     NLNNPGALDRVKQ"
     gene            1272..>1528
                     /locus_tag="VLM90_15280"
     CDS             1272..>1528
                     /locus_tag="VLM90_15280"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HSQ14392.1"
                     /translation="MATNVIMPALGVAQQTGTVLKWLKAEGQAVTKGEPLMEIETDKS
                     TVEIEAAASGILSRVTAKAGDEIPVGQTIALILAPGEEATSA"
BASE COUNT          346 a          449 c          440 g          293 t
ORIGIN      
        1 cgctgaagca atcggagctg ggcgcgctgc tctgcttcga catgaacaac attcgttaca
       61 ttaccgcgac ccacatcggc acctgggcaa tggataagct ggtgcgcttc tcgttgttgc
      121 cgcaggatga cgaacctatt ctctgggact tcggctcggc ggcgcgccat catcagattt
      181 acagcccgtg gttgggcgag cgctcgcgcg ccggcatttc tacgctgcgc ggcgcgaccc
      241 atcctggctc cggtctggcc gacgatgtcg cgaaaaaaat taaactcgaa ttagaaatgc
      301 gcaatttaca gaacgagccg gtcggcgtcg acgtgatcga gatgccggtg ctgttcgccc
      361 tccaagccca aggcatcaag gtcgtcgacg gccagcagtt gatgcacgaa gtgagaaaaa
      421 tcaaaaccca agacgagatc acgctgctca acaccgcgac catgatggtc gacgccgcct
      481 acgatgagct ctatcgcttc atgaaacctg gcgtgaaaga aaacgaatgc gtcggcgtgg
      541 tcagcaaagt gctttacgat ctcggctccg aacatgtcga gggcgtcaac gcgatctccg
      601 gcgagcgctg cagcccccac ccgcatgtct acacggaccg cgtgctccgt cccggcgatc
      661 cggcgttttt tgacattctc cacagcttca acggctaccg cacttgctac taccggacgt
      721 tcgccatcgg cagcgcgtcg ccggcgatgg tcgacgccta caaacgtagc cgcgactaca
      781 tggacgccgc gatcagcatc gtcaagccgg gaatcaccac ggcggatgta gtcaagctct
      841 ggcccaaggc gcaagagttc ggcttcgcca acgaagaagc cgccttcgca ttgcaatacg
      901 gccacggcgt cggtttgtcg atctgggaga aaccgatctt cagccgcctg gtttccctcg
      961 atcatcccga agtgatcgaa gaaggcatgg tcttcgcgct ggaaacctac tggcccgccg
     1021 ccgacggctg gtccgccgcg cgtctcgaag aagaagtcgt cgtcaccaaa gacggctgcg
     1081 aactcatcac gcgctttccg tccgaaaagt tgctggtcgc cggcacgcat tatttcacca
     1141 ccggcgggga gctgccgacg acccgcgaaa cgcagtcgaa tctgaacaat ccgggagcgc
     1201 tggacagggt gaagcagtaa ttcgatcgaa ctgatcgagc gagaattatt gaaattttaa
     1261 ctgaggttag tttggcaacc aatgtaatca tgcccgccct cggcgtggcg cagcaaacgg
     1321 gaactgttct caagtggctc aaagctgaag gtcaagccgt gaccaaaggc gagccgttga
     1381 tggaaatcga aaccgataag tcgacggtgg agatagaagc agcggcttcg ggtattctct
     1441 ctcgcgtgac ggcgaaagcc ggagatgaaa ttcctgtcgg tcaaacgatc gctttaatct
     1501 tggcgccggg tgaagaggcg acttcggc
//
LOCUS       DATIRS010001195         2148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1270579, whole genome shotgun sequence.
ACCESSION   DATIRS010001195 DATIRS010000000
VERSION     DATIRS010001195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2148
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1270579"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..660
                     /locus_tag="VLM90_15285"
     CDS             <1..660
                     /locus_tag="VLM90_15285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14393.1"
                     /translation="HTKFITFDPRDAHTLYACVEQGAFLKSTDLGKSWRELNTVGLYK
                     DKNRPVEHFYDVHRCLIDPRDPQRIYVTGGAGLYVTYTGGGSWERWTADDWAKDVYPD
                     GFVWNPKNPDTMFVAAAEHNPVTWRKAGPAARAEGKIYRSKDGGKNWQRLAGGLPASL
                     KHEFGALCLEEANGNCAIFGGTTGGEVYCSEDNGESWTLITDQLAAISKKGHERLLAA
                     S"
     gene            945..1694
                     /locus_tag="VLM90_15290"
     CDS             945..1694
                     /locus_tag="VLM90_15290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14394.1"
                     /translation="MTIRSDKPGAALALQLLKQSEQDAAITPMDAVVDAARAGKFTND
                     HCFRLLARLWTLKRLLYYVYGGWAQGINLNEYPPAVAYLFGKQTYDESSQEMQYCDEI
                     LRRRFVPTQRALFAHPYGQFGTATRTGAYIFCLRALANYPHNIRIAALNLGPKVIELA
                     WTERFAESLPDQSMRAVFHSQLAETRSHVLMGQHQVERYVHKAVDSELAKRLCTETKR
                     DYLFFLEETARFVLGMAEEKAGEVTVQADID"
     gene            1863..2141
                     /locus_tag="VLM90_15295"
     CDS             1863..2141
                     /locus_tag="VLM90_15295"
                     /inference="COORDINATES: protein motif:HMM:NF026048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster-binding protein"
                     /protein_id="HSQ14395.1"
                     /translation="MATPKLKIDHGKCTECRMCYVACREIEINAVVVSPTSRHFLEID
                     ERCTYPGCTVCLMYCPAAGSIVETATGRSMVPPPPEVWSENKRWPRQP"
BASE COUNT          508 a          643 c          592 g          405 t
ORIGIN      
        1 catacgaaat tcattacctt cgatccccgc gatgcgcaca cgctctacgc ctgcgtcgag
       61 caaggcgcgt ttctcaaaag caccgacctg ggcaagagct ggcgcgagct caacaccgtg
      121 gggctgtaca aagacaagaa ccggccggtg gaacacttct atgacgtgca ccgctgtttg
      181 atcgatccgc gcgatccgca gagaatctac gtcaccggcg gcgccggact ctacgtcacc
      241 tacaccggcg gcggcagctg ggaacgctgg acggcggacg attgggcgaa agatgtctat
      301 cccgacggct tcgtgtggaa tccaaaaaat cccgacacca tgttcgtcgc cgccgccgaa
      361 cacaatccgg tgacctggcg caaggccgga ccggccgccc gcgccgaagg aaaaatctat
      421 cgaagcaagg acggcggaaa aaattggcag cgcctcgccg gcggactgcc ggcaagcttg
      481 aagcatgagt tcggcgcgct ctgtctcgaa gaagccaacg gcaactgcgc gatcttcggc
      541 ggaacgactg gcggcgaggt ttattgcagc gaagacaacg gcgaaagctg gacgctgatc
      601 accgatcaat tggcggctat ttctaagaaa gggcacgagc gtttgttggc agcgagctga
      661 aagatggagc aattcacgat cacagagaaa tccgattccg actcctttcc tctcgacaga
      721 ctgtgtcgca gctgtcattc cgaggcaaag ccgaggaatc tagtctttgt aagtggcaga
      781 caagacgaga tccctcgcgg agtttatcct gagccttgcc gaagggctcg ggatgacagc
      841 atcgcgaccg ttgcgaattt tgtcacagtc tcttcatggg gcaagagacc ggatcgacgg
      901 cgctgaagcc gcattgagtt gagcttaaca ttgcaaaatc cgccatgacg atccgatccg
      961 acaaacccgg cgctgccctc gccttgcaat tgctcaaaca aagcgagcag gacgccgcca
     1021 tcacgccgat ggacgccgtg gtcgacgccg cgcgcgcggg aaagttcacc aacgaccact
     1081 gcttccgcct gctcgcccgc ctgtggaccc tcaaacgcct gctctattat gtctacggcg
     1141 gctgggcgca aggtataaat ttaaacgagt atccgccggc tgtcgcttat ctcttcggca
     1201 agcagaccta cgacgagtcg tcgcaggaaa tgcaatactg cgacgagatt ctgcgccgcc
     1261 gtttcgtgcc gacccagcgc gccctgttcg cccatcccta cggccagttc ggcaccgcca
     1321 cgcgcactgg agcctatata ttttgcctgc gcgcgctggc caactatccg cacaacatcc
     1381 gcatcgccgc gctcaacctc ggcccgaagg tcatcgagct cgcctggacc gagagattcg
     1441 ccgagtcgtt gccggatcaa tccatgcgcg cggtatttca cagtcaactg gccgagaccc
     1501 gcagccatgt gctaatgggc caacaccagg tcgagcggta cgttcacaag gcggttgaca
     1561 gcgaattggc caaacgcctg tgcacggaaa ccaagcgcga ctatctgttc ttcctcgaag
     1621 aaaccgcccg cttcgtcctc ggcatggccg aagagaaagc cggagaagtg acggtgcagg
     1681 cggatataga ttaaaaaata gcagccgttc aagggttcaa ggttcaaaag ttcaatcgat
     1741 tccgaactct gaccttgaac caaacgcatt gaacgttttg aacggcttga acgattggaa
     1801 cctctggaac tttttggaac acttgaaaca aacgtttttc aataggtctg attgacaaca
     1861 agatggcgac accaaaactc aagattgatc atggtaaatg caccgaatgc cgcatgtgct
     1921 acgtcgcctg ccgcgagatc gagatcaatg ccgtcgtcgt gtcgccgaca tcgcggcatt
     1981 ttttggaaat cgacgagcgc tgcacctacc ccggttgcac ggtgtgcttg atgtattgtc
     2041 ccgccgcagg ctccatcgtc gagaccgcca ccggccgttc aatggtacca ccgccgccgg
     2101 aagtctggag cgaaaacaaa cgctggccgc gccaacctta agaacgat
//
LOCUS       DATIRS010001196         2440 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_483637, whole genome shotgun sequence.
ACCESSION   DATIRS010001196 DATIRS010000000
VERSION     DATIRS010001196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2440)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2440)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2440
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_483637"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..336)
                     /locus_tag="VLM90_15300"
     CDS             complement(<1..336)
                     /locus_tag="VLM90_15300"
                     /inference="COORDINATES: protein motif:HMM:NF012449.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0030955 - potassium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HSQ14396.1"
                     /translation="MRRTKIVCTIGPASSSEKMIEGLIRAGMNVARLNFSHGDYASHR
                     RVIRTIRRLERKLATPVAILQDLPGPKIRIGAMAGDRVRLQTRGRLVLTTRKVLGSEL
                     AVPVNYPGLA"
     gene            complement(476..1324)
                     /locus_tag="VLM90_15305"
     CDS             complement(476..1324)
                     /locus_tag="VLM90_15305"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSQ14397.1"
                     /translation="MARLLPRLHAKAFTGGLIVLTFILVGIFGPYLAPHDPNKQELTA
                     MMKSPEGIGSNHVLGTDNLGRDIFSRVVHGSRVSLLVAFAVVFVSGLIGITLGAVSGY
                     FGGKVDFLIQKLVEVIWAFPPLLLGITIMAFLGQGLFNLILALVAQRWIPYCRVVRGQ
                     ALSLRSRDFVTAAQSLGSGHCQIILRHIIPNLIQTSLVIGTFAMASSIIAEASLSFLG
                     VGVPPHIPTWGTMLADARIYISTAWWLPLFPGLCIFITVLGINLLGDALRDILDPRLK
                     RTGSGL"
     gene            complement(1341..2342)
                     /locus_tag="VLM90_15310"
     CDS             complement(1341..2342)
                     /locus_tag="VLM90_15310"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSQ14398.1"
                     /translation="MTAYLLRRLAGTVPVLVLISLLVFLLIHAAPGDPTLMLLGEETN
                     AAEVAKAKARWGLDQPLYVQYWKFLKSVAAGDFGKSFKYAEPVTSVIRSRLPATIELA
                     FCAIVIATLLAIPLGVWAGARPNSWIDNLSTTCGLFGISMPSFWLAIMLILLLAGVLN
                     ILPTSGRSTYGIAGPERTGFYILDSVMAKNWQAVWDALTHLFLPALALGVNMLGILMR
                     VTRSSILEVMNEDYVRTARAKGLREKKVVWRHVSHNALIPVITVVGLELGTLLSGSII
                     VETVFAWPGGGSLLITALNARDYPLVTGLVMTYTTAFVAINLIIDGLYAVVDPRIRY"
BASE COUNT          555 a          683 c          760 g          442 t
ORIGIN      
        1 agccagtccg ggataattca ccggcacggc aagctcactg ccgagcactt tgcgggtcgt
       61 caggaccaga cggccgcggg tttgtaaacg cacgcggtcg ccggccatgg cgccgatgcg
      121 gatcttcggc cccggcaggt cttgcaagat cgccaccggc gtcgcaagtt tacgttcgag
      181 cctacggatc gtccgaatca cccggcggtg cgaggcatag tcaccatggc tgaagtttag
      241 ccgcgcgaca ttcatgccgg cgcggatcaa accttcgatc attttctccg atgagctggc
      301 agggccaatg gtgcaaacga ttttagtgcg gcgcattccg atcaatttac acgagagcgt
      361 gggggaatca acgcgagcgg gaggaagatg ggattggagt gatggagtgc tggagtgttg
      421 gggtttccga ttcgatgact ccaccactcc attactccat cactccaacc ggtcttcaaa
      481 gccctgaccc cgttcgtttg agccggggat cgaggatgtc gcgcagggcg tcaccgagaa
      541 gattgatgcc cagcaccgtg atgaagatac acaggccggg aaacagcggc agccaccatg
      601 cagtgctgat ataaatgcgc gcgtcagcga gcatggtgcc ccaggtcggg atatgcggcg
      661 gcacgccgac gccgagaaag ctcaggctcg cttcggcgat gatcgacgac gccatggcga
      721 aggtgccgat gacgagagaa gtttgaatca agttgggaat gatgtggcgc aggatgattt
      781 gacaatggcc cgagcccaag gattgggccg cggtgacaaa gtcgcgggag cgcagcgata
      841 acgcctggcc gcgcaccacc cggcaatagg gaatccaccg ttgcgccacc agcgccagga
      901 ttaaattaaa caagccctgg ccgaggaagg ccatgatcgt gatgccgagc aacagcggcg
      961 gaaaggccca gatgacttcg actaattttt gaatcagaaa atcgaccttg ccgccgaagt
     1021 agcccgacac cgcgcccagt gtgatgccga tgagccccga gacgaacacc acggcgaagg
     1081 cgaccaacag cgacacccgc gagccgtgca ccacccggct aaatatatcc cggccgagat
     1141 tgtcggtgcc taagacatgg ttggagccga ttccctcggg cgatttcatc atggcggtga
     1201 gttcttgttt gttgggatca tggggcgcca agtatggccc aaagatgccg accaagatga
     1261 acgtcaagac gattagcccg ccggtaaatg ccttggcatg gagccgcggc agcagacggg
     1321 ccaaggcgcc ggggctcttc tcagtaacgg attcgagggt caactactgc ataaagtcca
     1381 tcgataatta aattgatcgc gacgaacgcc gtggtgtagg tcatcaccag gccggtaacc
     1441 agcggatagt cacgggcgtt gagcgcggtg atcagtaaac tgccgccgcc cggccaggcg
     1501 aacacggttt cgacgatgat cgagccgctg agcaaggtgc cgagctccaa gccgaccacg
     1561 gtgatgaccg ggatcaaggc gttgtggctg acatggcgcc agacgacttt tttctcgcgc
     1621 aatcctttgg cccgcgccgt gcgcacataa tcctcgttca tcacttccaa tatcgacgag
     1681 cgggtgacgc gcatgaggat gccgagcata ttaacgccga gggcaagcgc cggcaaaaat
     1741 aaatgcgtca acgcgtccca aaccgcttgc cagtttttcg ccatgacgct gtcgagaata
     1801 taaaagccgg ttcgttccgg tccggcgatg ccgtaggtgc tgcggccgga ggttggcaaa
     1861 atattcaaca cgccggcgag tagcaggatc aacatgatcg ccagccaaaa gctcggcatg
     1921 ctgatgccga acaggccgca agtggtgctg aggttgtcga tccacgagtt cggtcttgcg
     1981 ccggcccaaa cgcccagcgg gatggccagc agcgtggcga tgacgatggc gcaaaacgcc
     2041 agctcgatgg tcgccggcag ccggctgcga atcacgctgg tgaccggctc ggcatacttg
     2101 aacgacttgc cgaaatcgcc ggcggcgacc gatttcaaga atttccagta ctgcacatag
     2161 agcggttgat cgagtcccca gcgcgcttta gccttggcga cttcggcggc gttggtttct
     2221 tcgccgagga gcatgagcgt cggatcgccg ggcgccgcat ggatcagcaa gaacactaac
     2281 aagctgatca gcacgagaac tgggacggtt ccggcaaggc ggcgcaggag ataggctgtc
     2341 atgatcgttc aaggttcaaa ggttcaaaag ttcaaggtcc gccggcaggc gaactctgcg
     2401 aagttgaact ttcgcgtgcc atgttagcat tagctgggcg
//
LOCUS       DATIRS010001197         2316 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_680037, whole genome shotgun sequence.
ACCESSION   DATIRS010001197 DATIRS010000000
VERSION     DATIRS010001197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2316
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_680037"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1057
                     /gene="murD"
                     /locus_tag="VLM90_15315"
     CDS             <1..1057
                     /gene="murD"
                     /locus_tag="VLM90_15315"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008764 -
                     UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HSQ14399.1"
                     /translation="PVLSEIELAYRYFTAPLVAITGTNGKSTTTTLIGKMLQADGKKV
                     FLGGNLGAPFIGAVTDSWDWGVIEISSFQLEWVDEFRPRIALLLNLTEDHLDRYASFA
                     DYCQAKERIFAAQQRADVAILNRDDPLVWQLRERIAAHVVSFGFGEIAEGVFATPTEI
                     VWRDGAVEERFWLAKAKIQGVHNVENIMAAIAAAKCAGVSRRAIEQALEEFPGLEHRL
                     EFVREKDGVRYYNDSKGTNVGAVAKSLASFSGPVILLAGGVDKGGDYAPLAAGVKNQV
                     RRLVLFGAAKQTIAAALGRLTTTVLVNDIAAAVGDAVAHAQPGDVVLLSPACSSFDQF
                     RNYAERGKSFKNLVQAL"
     gene            1054..2148
                     /gene="ftsW"
                     /locus_tag="VLM90_15320"
     CDS             1054..2148
                     /gene="ftsW"
                     /locus_tag="VLM90_15320"
                     /inference="COORDINATES: protein motif:HMM:TIGR02614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HSQ14400.1"
                     /translation="MRDALAVDKWILLAVIGLVAMGVVMVLSTSYLYSQERYADGTFF
                     FRKQLIAMGAGVVALIVCSLIPAHQYRRFAYPLLALTLVFLILVLIPGIGASRGGARR
                     WIAFAGFAFQPSELAKLAVVVYLAHSIAKKEPLIGSFSIGVLPHMIVTGLFAGVLLLE
                     PDFGSALILAMLLYSMLFIGGVRVHHLLGTGLLALPLLIYVMTQADYRMRRLTCFLDP
                     WSDAAGCGFHVIQSLIAFGSGQLWGRGLGESRQKLFYLPEAHTDFVYSVIGEELGLLG
                     ALAVLALFGVIILRGLRLTSRIEEPFDQYLAFGLTVLLGLQALIHMGMLMGLMPTKGL
                     VLPFISYGGSAMLINLAEAGILLSLSRRRV"
BASE COUNT          383 a          668 c          736 g          529 t
ORIGIN      
        1 tccggtgttg agcgaaatcg agctggccta tcgctatttc accgcgccgc tggtggcgat
       61 caccggcacc aacggcaaaa gcacgacgac gaccttgatc ggcaagatgc tccaggccga
      121 cggcaagaaa gtttttctcg gcggtaacct gggcgcgcca tttatcggcg cggtgacgga
      181 ctcctgggat tggggcgtga tcgagatcag cagctttcag ttggagtggg tcgacgagtt
      241 tcgcccgcgc atcgcgctct tgctcaacct caccgaggat cacttggacc gctacgccag
      301 tttcgctgac tactgccaag ccaaggagcg catcttcgcg gcgcagcaac gcgccgacgt
      361 ggcgatcctc aaccgcgacg atccgctggt atggcagctg cgcgagcgca ttgccgcaca
      421 tgtggtctcc ttcggctttg gcgaaatcgc cgaaggtgtg ttcgcgacgc caacggagat
      481 cgtttggcgc gacggcgccg tcgaggagcg cttctggtta gccaaggcga agatccaggg
      541 cgtgcataac gtggaaaaca tcatggccgc catcgcggcc gccaagtgcg ctggtgtctc
      601 gcgccgagcg atagaacaag cgctcgaaga gttccccggc ctcgaacacc ggcttgaatt
      661 tgtccgcgag aaagacggtg ttcgctacta caacgattcc aagggcacca acgtcggcgc
      721 ggtggcgaag tccctggcga gcttttccgg gccggtgatc ttgctcgccg gcggcgtcga
      781 caagggcggc gactatgcgc cgttggcggc gggtgtcaag aaccaagtcc gtcgcttggt
      841 gttgttcggc gcggccaaac agaccatcgc cgccgccttg ggccggctga cgacgactgt
      901 gctggtcaac gatatcgccg ctgcggtggg cgatgccgtc gctcacgctc agccgggaga
      961 tgtggtgttg ctgtcgccgg cctgttcgag tttcgatcaa ttccgtaatt atgccgaacg
     1021 cggcaagagc ttcaagaact tggtgcaggc cctatgagag atgcattggc cgtcgataaa
     1081 tggattctgc tggcggtcat cggcctggtc gccatgggcg tggtcatggt gctgagcacc
     1141 agttatctct attcccaaga gcgttacgcc gacggcacgt tcttttttcg caaacaattg
     1201 atcgccatgg gcgccggcgt ggtcgcgttg atcgtctgtt cgctgatccc ggcgcatcaa
     1261 taccgccgct tcgcctatcc gttgttggcg ctgaccctgg tgtttctaat tctcgtgctg
     1321 attcccggta tcggcgccag tcgcggcggc gcgcgccgct ggattgcgtt tgccggcttt
     1381 gcctttcaac cgtcggagtt ggccaagttg gcggtcgtcg tctatctcgc ccattccatc
     1441 gccaagaaag aaccgctgat cggctccttc tccatcggcg tcttgccgca catgatcgtg
     1501 accggcctgt tcgccggcgt gctcctactc gaacccgact tcggcagcgc cttgattctg
     1561 gccatgctgc tctactcgat gttgttcatc ggcggagtgc gggtgcacca tctgctcggc
     1621 accggcctgt tagccttgcc tttgctgatt tatgtcatga cccaagcgga ctaccggatg
     1681 cgccgcttga cctgtttttt agacccgtgg agcgatgcgg cgggctgtgg ctttcacgtc
     1741 attcaatcgt tgatcgcttt cgggtccgga cagttgtggg ggcgcggctt gggcgagagc
     1801 cggcagaagt tattttatct ccccgaagcg cacaccgatt tcgtttactc ggtgatcggc
     1861 gaggagttag ggctgctcgg tgcgttggcg gtgttggcgc tgttcggcgt gattattttg
     1921 cgcggcctgc ggctgacctc gcgcatcgag gagccattcg atcagtattt ggctttcggc
     1981 ttgacggtgc tcttgggact ccaggcgttg attcacatgg gtatgttgat ggggctcatg
     2041 ccgaccaagg gactggtgct gccgttcatc agttacggcg gctcggccat gctgatcaat
     2101 ctggctgagg cgggcatctt gctcagcctg tcgcgccgga gagtttagca tgcgggtgat
     2161 tttcgccggc ggcggaaccg gcggccacct gtttcccggt ctagcggtgg cgcgggagtt
     2221 tcagcgccgc gacggccaga cggaaatagt ttttatcgac accgagcagg gcatcgaatt
     2281 tcgcgtgtta ccgaaggaag gattcaaact ggaaac
//
LOCUS       DATIRS010001198         3590 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_483680, whole genome shotgun sequence.
ACCESSION   DATIRS010001198 DATIRS010000000
VERSION     DATIRS010001198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3590)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3590)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3590
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_483680"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..603
                     /locus_tag="VLM90_15325"
     CDS             <1..603
                     /locus_tag="VLM90_15325"
                     /inference="COORDINATES: protein motif:HMM:NF024739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ14401.1"
                     /translation="NSWDSLLDPKWKGKIVILDPRSPGSGESNWAFLLKIKGEQFLDR
                     LAAQEMMVGRNLRQLGEAVARGKSAVSIGVSYYTYLPFIKAGLPVKSISNIKEGYYAG
                     TGSGNLAVLKNQAHPNASKVFVNWLLSREGQSALTKALGQPTRRFDVDTKWTREFGHP
                     SAKEVLTPEKFDELENGSEEVVFKYRKPAMQLAEKLFRGV"
     gene            629..1741
                     /locus_tag="VLM90_15330"
     CDS             629..1741
                     /locus_tag="VLM90_15330"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ14402.1"
                     /translation="MKKLSSLASLALALLSASSLSAQSPQFRQAEWDKILEAAKKEGK
                     VVASIPPTPELRKLMEITFTRRYGIATEFVPARGGAVVQRLVSEAKAGVQYFDLHIGG
                     TESVITAMLPENILDAIDPYLILPEVRDPKHWWGGHIYIDNAKRYIYNFVAYQTVSLW
                     SDPNQYKPSEFKSFDDLLSPKLQGKIGISDPRTPGSGSSMWSYMHYIKGEEYLRKLVG
                     QKLFITRDLRLLAENLARGKIAVTSGIGYSEFQPFIKANLPVAPLPVPKEGLYISGGY
                     GHLTILKNNPHPNATKVFVNWLLSRDGQEVFGRGMGVGSRRLEIDTKWLKDYGVIAAK
                     DFLTPDQFYKYENQSEEKINKVREPAAAFARKLLGA"
     gene            1769..3238
                     /locus_tag="VLM90_15335"
     CDS             1769..3238
                     /locus_tag="VLM90_15335"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ14403.1"
                     /translation="MAGRDLRDFIDDLEERNELQRIKAEVDWNEELGAITREVSSQYG
                     PALLFENITGHKNTLCRRLFTNGTGSKKRMCRILGVADTTADAEIVRVFKERFAKPLP
                     PVTVSTGPVKDNIVKGDDVDLYQLPVPKWNPLDGGRYIMTSGSVVSRDPDNGTLNVGT
                     YRGMIGTKNTIGVLLATTQGWGVHFTKQRSRNQPMPVAVVLGWDQSLFIAASTPVIHP
                     EYDMAGSLRRAPVELVKCETNDLLVPASAEIVLEGFISPDPSTFTLEGPFSEYPGYYG
                     GSKSPKHTIQVTCITYRNDPIFHGCLTGASPGRTNECSTWTPATFSAMAWHTLEQAGV
                     PNITGVWRGKWPEMLRIQIHKTHRGHAQQVAAALWGSHLGNYAGKHLIVVDDDIDIHD
                     GEALEWALCYRVNAGLGDITTFAGSSGSMLDPSVPLADRNSVKYGHGLWTRVLIDATI
                     NWALEPQEQYGGNRYPPLGTTISAEMAATVKRRWREYGF"
     gene            3228..>3590
                     /locus_tag="VLM90_15340"
     CDS             3228..>3590
                     /locus_tag="VLM90_15340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14404.1"
                     /translation="MDSNVRNIQSARARQRTYYERFMEKEGVPVVEGFGVTDVGNLHL
                     KAWRRLGCDGAYLQLRGLEGITGVYVGKLAPGAASTPERHLYEKVIYILQGQGVAEIQ
                     QRNHVPQSISWQTGSLFSP"
BASE COUNT          794 a          985 c         1088 g          723 t
ORIGIN      
        1 aactcgtggg atagtttgtt agatccgaag tggaagggaa agatcgtgat cttggacccg
       61 cgttcgccgg gctcgggaga atcgaattgg gcttttctgc tgaagatcaa aggtgaacag
      121 tttctcgaca ggctcgcggc gcaggaaatg atggtcggac gcaacctgcg ccaactcggc
      181 gaggcggtgg cacgcggcaa gtccgcggtc tccatcggtg tctcctatta cacctatctg
      241 ccgttcatca aagccgggtt gccggtcaaa tcgatttcga acatcaaaga gggctattac
      301 gccggcacgg gtagtggcaa tctggcggtg ttgaaaaatc aagctcatcc caatgcatcc
      361 aaggtcttcg tcaactggct gctgtccaga gaagggcaga gcgcgctcac caaggcgttg
      421 ggacagccga cgcggcgctt cgacgtcgat accaagtgga ccagagagtt cgggcacccg
      481 tcggccaaag aagttcttac accggaaaag ttcgatgagt tggagaacgg ctctgaagag
      541 gtcgtcttca agtatcgcaa accggctatg caattggcgg agaaactgtt caggggagtc
      601 taggaactct tcattggtga gtggaaacat gaagaaatta tcatcattgg catcgttggc
      661 tttggcgctt ttgagcgcct catcgttatc ggcgcagagc ccgcagtttc gtcaggccga
      721 gtgggataaa attcttgaag cggccaagaa ggaaggcaag gtggttgctt cgattccgcc
      781 gacgccggag cttcgcaagc tcatggagat cacgtttacc cggcgttacg gcatcgccac
      841 tgagtttgtg ccggcgcgtg gcggcgcggt ggtgcaacgg ctcgtcagcg aagccaaggc
      901 cggcgtgcaa tatttcgatc tgcatatcgg cggcaccgaa tcggtgatca ccgccatgtt
      961 gccggagaat attctcgacg ccatcgatcc ctatctgatt ttgccggaag tgcgcgaccc
     1021 caaacattgg tggggtggcc atatctatat cgacaacgcc aaacgctaca tctacaactt
     1081 cgtcgcctat caaaccgtca gtctgtggag cgatccgaat cagtataaac ccagcgagtt
     1141 caaatccttc gacgatctat tgagtccgaa actgcaaggc aagatcggca tcagcgatcc
     1201 gcgtacgccc ggttccggtt cgtcgatgtg gtcgtatatg cattacatca agggggagga
     1261 gtacctgaga aaactcgtcg gtcaaaaact gtttatcacc cgggacctgc gtctgttggc
     1321 ggagaatctc gcgaggggta agatcgccgt cacttccggc atcggctatt cggaattcca
     1381 gccgtttatc aaagccaatc ttccggtagc gccgttgcca gtgccgaaag aggggctcta
     1441 cattagcggc ggctacggtc atctgacgat cctcaaaaac aatcctcatc ccaatgccac
     1501 caaagttttc gtcaactggc tgcttagccg cgacggccaa gaagtgttcg gccgcggcat
     1561 gggtgtgggt agccggcgac tggagatcga taccaagtgg ctcaaagact atggggttat
     1621 cgcggccaaa gatttcctga cgccggacca gttctacaag tacgaaaatc aatccgaaga
     1681 aaagatcaac aaggtgcgcg agcccgccgc cgcgttcgcg cgcaagttgc tcggggcgta
     1741 ggcgtcaatg ccgatgggag ttatttaaat ggccggacga gatctacgcg acttcatcga
     1801 cgatctggaa gaacgcaacg agctccagag aatcaaagct gaagtcgact ggaacgagga
     1861 gttgggcgcg atcacccgcg aggtgtcgag ccaatatggc ccggcgctgc tgttcgagaa
     1921 tatcaccggc cataagaata ccttgtgccg ccggctgttt accaatggca ccggcagcaa
     1981 gaagcgcatg tgtcggatcc tcggcgtggc ggataccact gcggatgctg aaattgtccg
     2041 cgtgttcaaa gagcgcttcg ccaagccgct gccgccggtg acggtgagca cggggccggt
     2101 gaaagacaac atcgtcaaag gcgatgatgt cgatctctat caactgccgg tgcccaagtg
     2161 gaatcccctc gacggcggcc gttacatcat gacgtccggc agcgtcgtca gccgtgaccc
     2221 cgacaacggc acgctcaatg tcggcaccta ccgcggcatg atcggcacga aaaacaccat
     2281 cggcgtgctg ttggcgacga ctcaaggctg gggcgtgcac tttaccaaac agcgcagccg
     2341 caatcagccc atgccggtgg cggtggtgtt gggttgggat cagtccttgt tcatcgccgc
     2401 atcgacgccg gtgattcatc ccgaatatga catggcgggc tcgctgcggc gcgcgccggt
     2461 ggaactggtc aaatgcgaga ccaacgatct gctggtgccg gcttcggcgg agatcgttct
     2521 ggagggattt atttcgccgg atcccagtac cttcacgcta gaaggtccgt tcagcgaata
     2581 ccccggctac tacggcggca gcaagtcgcc caagcatacg atccaggtga cctgcatcac
     2641 ctaccgcaac gatccgatct ttcatggctg cttgacgggc gccagtcctg ggcgcaccaa
     2701 cgagtgcagt acctggacgc cggcgacatt ctcggcgatg gcctggcata ccctcgaaca
     2761 ggcgggggtg ccgaacatca ccggcgtctg gcgcggcaaa tggccggaga tgctgcgcat
     2821 ccagattcat aagactcacc gcggccatgc ccagcaggtg gccgccgcat tgtggggcag
     2881 tcatttgggc aactacgccg gcaagcatct gatcgtcgtc gacgacgata tcgatattca
     2941 cgatggcgag gcgctggagt gggcgctctg ctatcgggtc aatgccggcc tgggcgatat
     3001 cacgacgttt gccggttctt caggctcgat gctcgatccc agcgtgccgc tcgccgaccg
     3061 caattcggtc aaatacggcc atggcctgtg gacccgggtg ttgatcgacg cgacgatcaa
     3121 ttgggcgttg gagccacagg agcaatatgg cggcaatcgc tatccgccgc tgggaacgac
     3181 catctccgct gagatggcgg ctaccgttaa aaggagatgg agggagtatg gattctaacg
     3241 ttcggaacat tcaatcagcg cgggcgcggc aacgaactta ttacgagcgc ttcatggaaa
     3301 aagagggcgt accggtggtc gaggggtttg gcgtcaccga cgtcggtaat ctccatctca
     3361 aggcttggag acggttgggc tgcgacggcg cgtatttgca gctgcgcggc ctggaaggga
     3421 tcaccggcgt ttatgtcggc aagcttgcgc cgggcgccgc cagcacgccc gaacgccatt
     3481 tgtatgagaa ggtgatctac attctccaag gccaaggagt ggcggagatc caacagcgca
     3541 accatgtgcc gcagtcgatt tcatggcaaa ccggcagtct gttttcgccg
//
LOCUS       DATIRS010001199         5632 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1956529, whole genome shotgun sequence.
ACCESSION   DATIRS010001199 DATIRS010000000
VERSION     DATIRS010001199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 5632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5632
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1956529"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            64..516
                     /locus_tag="VLM90_15345"
                     /pseudo
     CDS             64..516
                     /locus_tag="VLM90_15345"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
     gene            550..927
                     /locus_tag="VLM90_15350"
     CDS             550..927
                     /locus_tag="VLM90_15350"
                     /inference="COORDINATES: protein motif:HMM:NF026183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-binding protein"
                     /protein_id="HSQ14405.1"
                     /translation="MKIATNLSLAVQMLAFSEGVLLAERSGIARETVVEVILNSVIAS
                     PMVKYRGPFVLNMPDEAWFDVNMMQKDLLLALELGRQLDVPLPTTAITNEMLTTARGM
                     GLADKDFAILCEALARMAGMKNG"
     gene            1160..2025
                     /locus_tag="VLM90_15355"
                     /pseudo
     CDS             1160..2025
                     /locus_tag="VLM90_15355"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
     gene            2012..3031
                     /locus_tag="VLM90_15360"
     CDS             2012..3031
                     /locus_tag="VLM90_15360"
                     /EC_number="1.2.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF006667.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HSQ14406.1"
                     /translation="MSTPSAMAKAQIGMREITFGQAINEALAEEMRRDPTVFIIGEDV
                     AEAGTPFKVLSGLVNEFGTERVIDSPISEAGITGIGVGSAMTGMRPVVDIMFGDFLTL
                     TMDQLVNQAAKIHYMSGGKLKVPMVLRTTLGATRRSAAQHSQSLHAWVSHIPGLKVVV
                     PSTPYDAKGLLKSAIRDDNPVVFFEDKLMYQLKGLVPREEYTIPLGVADIKRAGKDIT
                     LVATSSMVQVALAAADSLESSGISAEVVDVRTTSPLDKQTLIESAKKTSRAIVIDEGY
                     EGYGVTAEIASVIADGAFYYLDAPVKRMGAMDVPVPFSPVLEDQTVPTPETVAERARG
                     LCNKK"
     gene            3134..4450
                     /locus_tag="VLM90_15365"
     CDS             3134..4450
                     /locus_tag="VLM90_15365"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HSQ14407.1"
                     /translation="MGLKTFGLMAVDWEERVNLERLRQDRLARIKAALKKSDLGSLLC
                     FDMNNIRYITATHIGTWAMDKLVRFSLLPQNDEPILWDFGSAARHHQIYCPWLGERSR
                     AGISTLRGATNPGSGRAEDVAKKIKLELEKRKLLNEPVGVDVIELPLLFALQAQGIKV
                     VDGQQLMHEVRKIKTQDEITLLNCATMMVDAAYDELYRFMKPGVKENECVGVVSKVLY
                     DLGSEHVEGVNAISGERCSPHPHVYTDRVLRPGDPAFFDILHSYNGYRTCYYRTFAVG
                     SASPAMVDAYKRSRDYMDAAISIVKPGITTADVVKLWPKAEEFGFANEEAAFALQYGH
                     GVGLSILEKPIFSRLVSLDHPEIIEEGMVFALETYWPASDGWSAARLEEEVVVTRDGC
                     EVITRFQSEKLLVAGTHYFTSGGELSTTRETQSNLNNPGALERVKG"
     gene            4504..>5632
                     /locus_tag="VLM90_15370"
     CDS             4504..>5632
                     /locus_tag="VLM90_15370"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase family
                     protein"
                     /protein_id="HSQ14408.1"
                     /translation="MATNVIMPALGVAQQTGTLLKWLKVEGESVTKGEPLMEIETDKA
                     TVEIEAPGSGILTQVIAKAGDQVPVGERIALILAPGEPLPPAPTAPARPKTVAKEAES
                     KPATKSPSASVSAMVIGGRVLASPAAKRIAREKGVTLASLGGSGPEGSILAEDVLRAA
                     PDETGATATFTADQILPLSPMRRIVGERMTHSKQSAPHFYISMDIDMSAVNKLRSKWK
                     QSGEDQVPSLNDFILYACAHALKDFPSLNSSFTEQGIKLRSDINLGMAVALEEGLVVP
                     VIRNADRLSLVALATQSRELVAKAQTKKLFPLDYESGTFTVSNLGMLGVDSFIAIINP
                     PQCAILALGRVAPRVVADDAMFAIKSLMTATLSADHRVVDGA"
BASE COUNT         1276 a         1578 c         1680 g         1098 t
ORIGIN      
        1 ctaaacatcg gctataggaa agattgttag ggggaggtct ttacggccaa tctaggtttt
       61 gtcggtctcg gtgttatggg tagccgcatg gtcgagcggc tgctcgccgc aggtcatcag
      121 gtaacgggtt acaaccggac acgagcgaag gcgcaaaaac ttctcggcgc tggcatgaaa
      181 tggggtgaga caccacgtgc cgttgccgag tcggccgaag ttaccttatc gatggtcacc
      241 aacacccagg ccctcgaagc cgtgaccagc ggcgttgacg gcgtactggc tggactcagc
      301 gcaggtaaaa tctacatcga catgagcacg gtgagcccgg cggcgagccg cgccgtggcc
      361 gggcaggtgc aagctaaagg cgcggctatg ctcgatgcgc cggtgtcggg cagtgtgatt
      421 accctcgacg agggcaagct ttcgatcatg gccgctggcg accgacaagc tttccaaagg
      481 gcgctgccga ttcttcaagc catcggtccc aaagtcaccc acgtcggcgc caacggtttg
      541 gccgtttcga tgaagatcgc gacgaattta agcctcgccg tgcagatgct cgccttcagc
      601 gaaggcgtgc tgctcgcgga aagaagcggc atcgcccgcg aaaccgttgt cgaggtgata
      661 ttgaacagcg tgatcgcctc gccgatggtg aaataccgcg gacccttcgt tttgaacatg
      721 ccagacgaag cctggttcga cgtcaacatg atgcagaagg atttgctatt ggcgctggaa
      781 ctcggccggc agctcgatgt gccgctgccg accaccgcaa ttaccaacga aatgctcacc
      841 accgcgcgcg gcatggggct ggcggacaaa gattttgcga tcctgtgcga ggcgctggcg
      901 cgaatggcgg gaatgaagaa tgggtgaagt ggaattggtc aaaagtggtg gagtgatacg
      961 ctccgaatag ccaacactcc attactccgt cactccaact gtcgctggct gtatttcgat
     1021 ggccaaacct aaaacaacaa cgtcgcgtac cgccaggcat gcccaggttc acgatgaacg
     1081 ctggcttcat ttctaccgcc agatggtgaa gatccggctg ttcgaggaag aggtgaatca
     1141 gctttacctg ggcgccaaaa tgccaggtct cgctcacctt tatatcggcg aagaggcggt
     1201 ggcggtgggc gtgtgtgaag cattgcgccg ggatgactac atcaccagca cgcaccgcgg
     1261 ccacggccac tgcattgcga aaggcgcggc agtcgacaaa atgttcgccg agttgctcgg
     1321 caaggaagcg ggctactgcc gtggcaaagg cggatccatg catatcgccg atcaagacac
     1381 cggcaatctc ggcgccaacg cgattgtcgg cggcagcgct ggaatagcga cgggcgccgc
     1441 catgtcggcg aaatgcgcgg cagcgatcag gtggccgttt gcttttttgg cgacggcgct
     1501 ttgggtcagg gacttctcta tgaatcgatg aacatggcat cgctgtggaa gttgccggtc
     1561 atgtttgttt gcgagaataa tcaatacaac gaatacacgc actaccgcga aaccaccgcc
     1621 ggagaagtga ccgcgcgcgc gcaggctttc ggcattcaca gcgaatccat cgacggtcag
     1681 gatgtgaaag tcgttcacgc cgccgcgttg aaatttgtcg agcgcgcgcg gcgcggccgc
     1741 ggaccggctt ttttgcaatg caacacttat cgttttcacg gccaccacgt cggcgatatc
     1801 gaccgcgctt attatcgatc caagacggaa gaggaagagt ggaagacccg gcgcgatcca
     1861 atcacgctgc ttgcggcttg gcttcagaaa aacaaactgg ctggcggcaa agcgctggaa
     1921 gcaatcgagc atgaactctc gacggaggtg aagtcggcgg taaacttcgc gcttagtgcc
     1981 aagtatcccg agccggatga agtagatcag catgtctacg cctagcgcca tggcaaaggc
     2041 acagatcgga atgcgcgaaa tcactttcgg acaggcgatc aatgaagcgc tcgccgagga
     2101 gatgcgccgc gacccgacag tattcatcat tggcgaagac gtcgccgaag cgggtacacc
     2161 gtttaaagta ttgtccggtc tggtgaatga attcggcacc gagagggtca tcgactcgcc
     2221 gatatccgaa gcgggtatca ccggcatcgg cgttggctcc gccatgaccg gcatgcgacc
     2281 ggtggtcgac atcatgttcg gcgattttct tactctgacg atggatcagt tggttaacca
     2341 agccgcaaag attcattaca tgtccggcgg caagctcaag gtaccgatgg ttttacgcac
     2401 cacgctcggt gcgacgcgtc gttccgccgc gcagcatagt cagagtctac acgcgtgggt
     2461 gagccatatt cccggcttga aagtcgtggt gccctccacg ccgtacgatg ccaagggttt
     2521 gctcaagagc gcgatccgcg acgataatcc cgtggtcttt ttcgaagaca agttgatgta
     2581 ccaactgaaa gggctcgtac cgcgggagga gtacactatt ccgctcggcg tcgccgatat
     2641 aaagcgcgcg ggtaaagaca tcactttggt ggcgacgagc agcatggttc aagtggcgct
     2701 agcggcggcg gattcgctcg aatcgagtgg tatcagtgca gaagtcgtcg atgtcagaac
     2761 gacgtcacca ctcgacaaac agacattgat cgagtcagcg aaaaaaacca gccgcgccat
     2821 cgtcatcgac gaaggttacg aaggctacgg cgtcaccgcg gagatcgctt cggtgatcgc
     2881 cgacggcgca ttctactatc tggacgcgcc ggtgaagcgc atgggcgcca tggacgtgcc
     2941 ggtgccgttc tcgccggtgc ttgaagatca gaccgtgccg acgccggaaa cggtcgccga
     3001 aagggcgcgc gggctatgca acaagaaata gacgaaaacc gttccaatat tttcaatggt
     3061 cccatctgtt ccaagggagt tttttggatt gaacgtttgg aacgactgga accttggaac
     3121 gaggaggtag gcaatggggc ttaaaacctt cggcctgatg gccgtcgact gggaagagcg
     3181 tgtcaatctg gaacggctgc gccaggatcg tctggctcgt atcaaagctg cgctcaaaaa
     3241 gtcggatctc ggttcgctct tgtgcttcga tatgaacaac atccgctaca tcaccgcgac
     3301 tcatatcggc acttgggcca tggacaagct cgtgcgtttc tcgcttttgc cccagaacga
     3361 tgaacccata ctctgggatt ttggctcggc ggcgcgccat catcagatct attgcccctg
     3421 gctcggcgaa cgctcgcgcg ccggcatctc tacattacgc ggagcgacaa atccgggctc
     3481 gggcagggcc gaagacgtgg ccaagaaaat caagcttgaa ttggagaagc gcaaactgtt
     3541 gaacgaaccc gttggcgtcg acgtgatcga attgccgttg ctgttcgcgc tgcaagctca
     3601 agggatcaaa gtcgtcgacg gtcagcagct catgcacgaa gtgcgaaaaa tcaaaaccca
     3661 ggatgaaatc acgctgctca attgcgcgac catgatggtc gacgccgcct acgacgagct
     3721 ttaccgtttc atgaaaccag gtgtcaagga aaacgagtgc gtcggcgtcg tcagcaaagt
     3781 gctttatgat ctcggctccg aacatgtcga aggagtgaac gcgatctcag gcgaacggtg
     3841 cagtccgcat ccgcatgtct acaccgaccg cgtgctccgt cccggcgatc cggcattttt
     3901 cgacatcctg cacagctaca acggttatcg cacctgttac taccgcacct tcgctgtcgg
     3961 cagcgcttcg ccggcgatgg tcgacgccta caagcgcagc cgcgactaca tggacgccgc
     4021 gatcagcatc gtcaagccgg gcatcaccac ggccgatgtg gtcaagctct ggcccaaagc
     4081 cgaagagttc ggtttcgcca acgaggaagc cgcgttcgcg ctgcaatacg gtcatggcgt
     4141 cggcttatcg atcttggaaa aaccgatttt tagccgtctg gtttctttgg accatccgga
     4201 aatcatcgaa gaaggcatgg tcttcgcgct cgaaacctat tggcccgcgt ctgacggttg
     4261 gtcggcggcc cggctcgaag aagaagtagt cgtcaccagg gatggctgcg aagtaatcac
     4321 gcggtttcaa tcggaaaaac tgctggtggc tggcacgcat tacttcacta gcggcggcga
     4381 gctatcgact acgcgcgaga cgcaatcgaa tctgaataac ccgggagcgt tagagcgagt
     4441 gaaaggttga acggactgaa ccctttgaag cttgaactgt tgaaccattg aaccgagggt
     4501 gatttggcaa ccaatgtaat catgcccgcc ctcggcgtgg cgcagcaaac cggcacgctc
     4561 ctcaagtggc tcaaggtcga gggcgagtcg gtaaccaagg gcgagccact catggaaatc
     4621 gagaccgaca aggcgacggt tgagatcgaa gcgccgggct ccggcattct gactcaagta
     4681 atagccaagg ccggcgatca agtgccggtg ggagagcgga tcgccctaat cttggcaccg
     4741 ggggaacctt tgccgcccgc accaacagcg cccgcccggc caaagacggt ggcgaaagaa
     4801 gccgagtcga aacccgcgac aaaatctcca tcagcctcag tttcggctat ggtgatcggt
     4861 ggacgcgtcc tcgcttcgcc cgcggcgaaa agaatcgccc gtgaaaaagg cgtcactctc
     4921 gcgtcgctag gaggcagcgg ccctgagggg agcatactgg ctgaagatgt cctgcgcgcc
     4981 gcgccggacg aaacaggcgc gactgcaacg ttcacggcgg atcaaattct gccactcagc
     5041 cccatgcgcc gcatagtcgg cgaacgcatg acccatagca aacagagcgc gccgcatttt
     5101 tacatcagca tggatatcga catgagcgcg gtgaacaagc tcaggtcgaa gtggaaacag
     5161 agcggtgaag atcaagtgcc gtcgctcaat gactttatcc tctatgcctg cgctcacgcc
     5221 ctgaaggatt tcccgtcgct caactcaagt tttaccgaac aaggaatcaa gctccgtagc
     5281 gacatcaatc tcggcatggc cgtcgctctc gaagaaggtc tggtggtgcc ggtgatccgc
     5341 aatgccgatc gcctgagctt ggtggcgctg gcgacccaga gccgcgaact ggtcgccaag
     5401 gcgcagacga aaaagctctt cccgctcgat tacgagagcg gcacttttac agtttcgaat
     5461 ctcggcatgc tcggtgtcga tagtttcatc gctatcatca atccgcccca atgcgcgatt
     5521 ctcgcgttag gacgagtcgc tccgcgcgtg gtcgccgacg atgccatgtt cgcgatcaaa
     5581 tcgttgatga cggcgacgct ctcggccgac catcgcgtcg tcgacggcgc cg
//
LOCUS       DATIRS010001200         2550 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1762546, whole genome shotgun sequence.
ACCESSION   DATIRS010001200 DATIRS010000000
VERSION     DATIRS010001200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2550
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1762546"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..510)
                     /locus_tag="VLM90_15375"
     CDS             complement(<1..510)
                     /locus_tag="VLM90_15375"
                     /inference="COORDINATES: protein motif:HMM:NF016155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carotenoid biosynthesis protein"
                     /protein_id="HSQ14409.1"
                     /translation="MHFVAWGFLVLQALIVVASLLGYGIFTSRPDLLMQVDPQARFFT
                     WAFHGFAVGNMLFGGLAVVADALLKNRLAALYAFAAVYAISLASEVMGTGWGVPFGPY
                     SYTNLLGPKWFELVPLLIPLSWFTMSWACWTMVCQQRSGVIAIMLATVLLVSWDLLLD
                     PAMSKVTSYW"
     gene            complement(654..806)
                     /locus_tag="VLM90_15380"
     CDS             complement(654..806)
                     /locus_tag="VLM90_15380"
                     /inference="COORDINATES: protein motif:HMM:NF024842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HSQ14410.1"
                     /translation="MRECDLAVVGAGPAGCATAISLAQRGFQVALIDRAVFPRDKLSG
                     DASTKV"
     gene            complement(803..1507)
                     /locus_tag="VLM90_15385"
     CDS             complement(803..1507)
                     /locus_tag="VLM90_15385"
                     /inference="COORDINATES: protein motif:HMM:NF025033.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSQ14411.1"
                     /translation="MKRSYEKEMMDLAGNSPVLLADDLRNLRLLNRYLRGSHSVLLAL
                     WRVLGSEPLKQLSILDVGTGSADIPAAIYARARRSDIAATIIGLEADPVSARIAAHRT
                     QQHAGLKIIQGDAGAPPFFPGSFDFVVASQFLHHFSEAKIIDLITQWAKLARRAIVIS
                     DLVRHPLAYYGIRWLTQLTTRNLMTLTDAPLSVRRAFTFDEWRDLLCQADVGSVEIFS
                     VFPFRMAAVVRLGGRQ"
     gene            complement(1504..>2550)
                     /locus_tag="VLM90_15390"
     CDS             complement(1504..>2550)
                     /locus_tag="VLM90_15390"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012337.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-[acyl-carrier-protein] synthase
                     family protein"
                     /protein_id="HSQ14412.1"
                     /translation="GSAVHLAVTAAQEALRRARVCPAAMSLEEKQSWGVILGSGGGTA
                     DFVEEQYRLYYSDQLRKISAYNVSSSTIGSLSSEISIHFGFHGPSHVISTGCTSSTDA
                     LGYAFNQIRFGLADHFVTGGADATITPAIMQGFCVMQAVSTSHNDEPARASRPFDRSR
                     DGFVLGEGAWILILEERELALSRGATIYAEVRGYASTCDAYHRVRLEPSGEEPARAMS
                     LAIEDARLAKDEVGYIALHGTATVLNDKTETRATKLCFGKRARELPMSSVKSMIGHPQ
                     GASGAAGVIAAICGMNGGFLPPTINLDESDPECDLNYIPNQSIAKATDIALCNCIGFG
                     SKNSALVIERGAMV"
BASE COUNT          597 a          791 c          711 g          451 t
ORIGIN      
        1 ccaataactg gttaccttgc tcatcgccgg gtcgagcagc aaatcccagg aaaccaacaa
       61 gaccgtagcg agcatgatcg cgataacacc cgaacgctgc tggcagacca tcgtccagca
      121 agcccaactc atggtgaacc aactgagcgg aatcaacagt ggcacaagct cgaaccactt
      181 gggaccgagc aagtttgtat aagagtatgg cccgaacggc acgccccagc cggtacccat
      241 gacttcgctc gccaaactaa tcgcataaac ggcggcaaaa gcgtataacg ccgcgaggcg
      301 atttttgagc aaggcgtcgg ccaccaccgc aagaccgccg aaaagcatat tgccgacggc
      361 gaaaccgtga aacgcccagg taaagaaacg cgcttgggga tcgacctgca tcaacagatc
      421 gggacgcgaa gtaaaaatcc cgtaacccaa caagctcgcg accacgatca gcgcctgcaa
      481 aactaaaaaa ccccatgcta cgaagtgcat cgttgctcct ccaaatgaat ttaaaccctc
      541 atcaatcaca gcagcggacc gcagacacac cgggctaacc gcagaaacgc gatcgccgcc
      601 gaaattcatg tccaaacgcc ggcgccgcga ttgattctga cccgctgtca gcttcacacc
      661 ttcgtagagg catcgccgga caatttatcg cgcggaaata ccgcgcggtc gatcagggcg
      721 acctgaaagc cgcgttgcgc cagggagatg gccgtagcac aacccgcggg tccggcaccg
      781 acaacggcga gatcacactc tctcattgac ggcctcccag ccgcaccacc gcagccatac
      841 gaaagggaaa caccgaaaat atttccaccg atccaacgtc ggcttggcac aacaagtcac
      901 gccattcatc gaacgtgaac gcacgccgga ccgacagcgg cgcatcggtg agtgtcatta
      961 ggttgcgcgt cgtcagctgc gtcagccaac ggatgccata atacgcgagg ggatgtcgca
     1021 ccagatcgct gatgacgatg gcgcggcggg caagcttggc ccattgcgtt atcagatcga
     1081 ttattttcgc ttcggaaaaa tgatggagaa actgcgatgc gacaacaaaa tcgaacgagc
     1141 cggggaaaaa cggcggcgcg ccggcgtcac cttgaataat cttgagccca gcgtgctgct
     1201 gggttcgatg ggctgcaatg cgcgcggata ccgggtcggc ttcgagtccg ataatcgtcg
     1261 cggcaatgtc gctccgcctc gccctggcgt aaatcgccgc gggaatatcg gcgcttcccg
     1321 tgcccacgtc gaggatagac aactgtttga gcggctcgct tccgagcacc cgccacagcg
     1381 ccagcagaac gctgtgcgaa ccgcgtaggt atcggttgag taggcgcaaa ttacgcagat
     1441 catccgccag gagcaccggg ctattgccgg cgagatccat catttctttt tcgtaacttc
     1501 gcttcatacc atcgctccac gctcgatgac taaggcggag ttcttggaac cgaaaccgat
     1561 gcaattacag agcgcgatat cggtggcttt ggcgatgctc tgattgggaa tgtaattgag
     1621 atcgcactcc ggatcggact catccagatt gatcgtcggc ggcaaaaagc cgccattcat
     1681 accacagatc gcggcgatga cgcccgccgc gcccgatgcc ccttgaggat ggccgatcat
     1741 cgacttgacc gaactcatcg gcaactcacg ggcccgtttg ccgaagcata acttggtcgc
     1801 gcgggtctcc gttttatcat tcagaacggt tgcggtgccg tgcagcgcaa tgtaaccgac
     1861 ttcgtctttg gccagccgcg catcttcgat cgccaagctc atcgcccggg cgggctcctc
     1921 gccgctcggc tcgagtcgga cacggtgata agcgtcgcat gtcgaggcat aaccgcgcac
     1981 ctcggcatag atcgttgcac cgcggctcag cgccaactcg cgctcctcga ggatcaaaat
     2041 ccacgcgccc tcgccgagga caaatccgtc ccggctccgg tcgaacggcc gcgacgcccg
     2101 tgccggctcg tcgttgtgcg atgtcgacac cgcttgcatg acacagaacc cctgcatgat
     2161 cgccggcgta atcgtcgcgt cggcgccgcc ggtgacaaaa tgatcggcca agccgaaacg
     2221 gatttgattg aaggcgtagc cgagagcgtc ggtggagctg gtgcagccgg tggaaattac
     2281 atggctcggt ccatgaaaac caaaatggat cgaaatctcg ctcgagagcg agccgatggt
     2341 cgaactcgac acattgtagg cgctgatttt gcgcagctga tcgctgtagt agagacgata
     2401 ctgttcctcg acgaagtcgg ctgtgccgcc gccgctgcca aggatcacgc cccaggactg
     2461 tttctcctcc aagctcatgg ctgccggaca aactcgggcg cggcgcagcg cttcctgcgc
     2521 ggcggtgacc gccagatgca cggcgctacc
//
LOCUS       DATIRS010001201         3151 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_286727, whole genome shotgun sequence.
ACCESSION   DATIRS010001201 DATIRS010000000
VERSION     DATIRS010001201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3151
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_286727"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1511
                     /locus_tag="VLM90_15395"
     CDS             <1..1511
                     /locus_tag="VLM90_15395"
                     /inference="COORDINATES: protein motif:HMM:NF014071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HSQ14413.1"
                     /translation="FTLSSDVAPFLGEFERAATTVFNAYIGPKISSYLQSLKAILRSK
                     GLKRDPLIMQAYGGVLDIDATCKNAVGIIESGPAAGIVGTRFLGEHIGEKNILATDMG
                     GTTFKVSVVRDGVIERDYKPVILRHSILSTKIWVESIGAGGGSIAWIDGDTGLLKVGP
                     QGAGAAPGPVCYDVGGREPTVSDADLILGYLNADYFLGGRMKLNKAKTLDAVREKIAK
                     PLKMSDVEAASGIYRIANSHMSDLIRKATVEKGHDPRNFVLFAFGGAAPVHASRYAAE
                     LGIRQVVIPLTASVHGATGLISSDVVYEYGKSDHVVLPVAPARVNDNFAGLLERALSD
                     LRAAGFAESDVQVMRSVDMRYRYQVHELNVPFPAGSGAITGRDMEELSMRFDDLYERA
                     FGQGSGYREAGKEILTFRLTATGLLKKPDIKAELARSADGVQAIKGKREVYFEEERKF
                     VATPVYDFVKMHPGMAFAGPAIVETPVTTMVVNPNDRAAMDEYRNIRIHLGA"
     gene            1513..>3151
                     /locus_tag="VLM90_15400"
     CDS             1513..>3151
                     /locus_tag="VLM90_15400"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HSQ14414.1"
                     /translation="MEVTPIIRSVDPITFEILSHRLYQIAKEMGTALERVGGTVNTTQ
                     MHDYMASLYLANGDVLSAGDSMGWHVACAGFAVKRIIERFENTAGIHPDDIFLLNDPY
                     LAAIHQSDVYLISPIHFRGLLVGWSATFVHVMDIGAMSPGGNSPGATEICHEGIRIPG
                     IKLVEGGKLRQDLFDAFINMTRQPVRVGLDLKCEIAANYFAKARMQALYEQLGPELVT
                     ALSQEMLNYSEAILGRRIAEIPDGSWSDSGSIHAGETWNVHVKLTKKGDHLLFDFTGS
                     SPQAKKGINLPYHATFGACYESILCTLAYDLPKNHGALKPLEVIAPAGTVVNPTAPAP
                     VSLNTTSGGATVKFVANSAIMQMLATSEKWQNEVMALNAGHRLARHAGVNQHGKYYVS
                     TLSEGALDGTGARSYKDGDDTGRGLSCHNIEWLEANFPLLYLFRRNTKGGAGAGRYRG
                     GTGGESALTVHDAPEGKIKGVALGVAGLRNSGQGMFGGYPGAPSLLMLKEGTRVGEVI
                     AAQQAPDGLDDIGGEGRLLPYCEFDIGANDVLYMRMSS"
BASE COUNT          646 a          910 c          987 g          608 t
ORIGIN      
        1 attttaccct gtcgagcgat gtggcgcctt ttttgggcga gttcgaacgc gcggcgacca
       61 cggtgtttaa cgcctacatc gggccgaaga tctccagtta cttgcaaagc ctaaaagcca
      121 tcctgcgcag caaaggcctc aagcgcgatc cactgattat gcaagcctat ggcggcgtgc
      181 ttgatatcga cgccacttgc aaaaatgccg tgggcatcat cgagtccggg ccggcggcgg
      241 gaatcgtcgg tacccggttt ctcggcgagc atattggcga gaaaaatatt ctcgccaccg
      301 acatgggcgg caccaccttc aaggtgagcg tcgtgcgcga cggtgtgatc gaacgcgact
      361 acaagccggt gatcttgcgc cacagcattc tgtcgaccaa gatctgggtc gagtccatcg
      421 gcgccggcgg cggcagcata gcctggatcg atggcgacac cggtttgctc aaagtcggac
      481 cgcaaggcgc cggcgcggcg cctgggccag tatgctacga cgtcggcggc cgcgagccga
      541 cggtttccga cgccgacctg attctcggtt atctcaatgc cgactatttt ctcggcggcc
      601 ggatgaaatt gaataaggca aagactctcg acgcggtccg cgagaaaatc gccaaaccgc
      661 tcaagatgag cgatgtggaa gccgccagcg gcatctatcg gatcgccaac tcgcatatga
      721 gcgatctgat ccgtaaagcg accgtcgaga aaggccatga tccgcgcaac tttgtgctgt
      781 tcgcctttgg cggcgccgcg ccggtgcacg cgagccgcta cgccgcggag ttggggattc
      841 gccaagtggt tattcctttg accgcgtccg ttcacggggc caccggactg atcagctccg
      901 atgtcgttta cgaatatggc aaatccgacc atgtggtgct gccggtggcg ccggcgcgag
      961 tcaacgacaa cttcgctgga ctgttagagc gcgcgctcag cgatctgcgc gccgctggat
     1021 ttgccgagag cgatgttcag gtcatgcgca gtgtcgacat gcgttaccgt taccaggtgc
     1081 atgaactgaa cgtgccgttc ccagcgggaa gcggggcgat cacaggacgc gacatggaag
     1141 aactgtctat gcgattcgac gacctctatg aaagggcgtt cggccagggt tcgggttacc
     1201 gcgaagcggg caaggaaatc ctgaccttcc gcctgacggc gacgggcttg ctgaagaaac
     1261 ccgacatcaa ggctgaactg gcgcgcagcg ctgatggcgt tcaggcgatc aaaggcaagc
     1321 gcgaggttta cttcgaagaa gagcgaaagt ttgttgccac gccggtctac gatttcgtca
     1381 agatgcatcc gggtatggcg ttcgccggcc cggcgattgt cgaaacgccg gtgaccacga
     1441 tggtggtcaa tcccaacgac cgcgccgcca tggatgagta ccgcaacatt agaattcact
     1501 tgggagctta agatggaagt aacgccgatc atccgtagcg tcgatccgat cactttcgag
     1561 attttgtcgc accggctcta tcaaatcgcc aaggaaatgg gcacggcgct ggaacgggtc
     1621 ggaggcacgg tcaacacgac gcagatgcac gattatatgg cgtcgctcta tctcgccaac
     1681 ggcgatgtcc tgtcggcggg ggactccatg ggctggcatg tcgcctgcgc cggcttcgcg
     1741 gtcaagcgca tcatcgagcg ctttgaaaac accgccggca ttcatcccga cgatattttt
     1801 ctgcttaacg atccctatct ggcggcgatc catcagtcgg atgtgtattt gatctcgccg
     1861 attcattttc gcggtctgtt ggtcggatgg agcgcaacct tcgtccatgt gatggacatc
     1921 ggcgccatgt cgccgggcgg caactcgccg ggggccacgg aaatttgtca tgaaggcatt
     1981 cgcatccccg gaattaaact cgtcgagggc ggcaagttga ggcaggacct gttcgacgcc
     2041 tttatcaaca tgacgcgcca gccggtgagg gtgggtctcg atttgaagtg cgagatcgcc
     2101 gccaactatt tcgccaaggc gcgcatgcag gcgctctatg agcagttagg tcccgagctg
     2161 gtcaccgcct tatcgcagga gatgctcaac tactccgaag cgatcctggg ccggcgcatc
     2221 gcggaaatcc ccgacggctc gtggagcgat agcggcagta ttcacgccgg cgaaacctgg
     2281 aacgttcatg tcaagctgac caagaagggc gatcatctgc tgttcgattt caccggcagc
     2341 agtccgcagg cgaagaaggg catcaacttg ccgtatcacg cgaccttcgg cgcttgttac
     2401 gagtcgatcc tgtgcacgct ggcttacgat ctgccgaaga accatggcgc gttgaaaccg
     2461 ctcgaagtca tcgcgccggc gggcacggtg gtcaatccga cagcgccagc gccggtgtcg
     2521 ctcaatacga catcgggcgg cgcgacggtg aagttcgtcg ccaactcggc gatcatgcag
     2581 atgcttgcca ccagcgagaa atggcaaaac gaagtcatgg cgctcaatgc cggtcatcgc
     2641 ctggcgcgcc atgccggcgt caaccagcat ggtaagtatt acgtctcaac gctttccgag
     2701 ggcgccctcg acggcaccgg cgcccgctcc tataaggacg gcgacgacac cggacggggc
     2761 ttgagctgcc acaatatcga gtggctggag gctaactttc cgctgctcta tctgtttcgc
     2821 cgcaacacca agggcggggc aggggcgggg cgctaccgcg gcggcaccgg cggcgagtcg
     2881 gccctgacgg tacacgacgc gccggaagga aaaatcaaag gcgtcgcgct gggcgtcgcc
     2941 ggactgcgca actcgggtca aggtatgttc ggcggatatc ctggggcgcc gagtctgctg
     3001 atgttgaaag aaggcacgcg ggtaggcgag gtgatcgcgg cgcagcaagc gccggatgga
     3061 ctcgatgaca tcggcggcga aggccggctc ttgccctatt gcgaattcga tatcggcgcg
     3121 aacgatgtgc tctacatgcg catgtcgagc g
//
LOCUS       DATIRS010001202         2084 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_778839, whole genome shotgun sequence.
ACCESSION   DATIRS010001202 DATIRS010000000
VERSION     DATIRS010001202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2084
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_778839"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(187..915)
                     /locus_tag="VLM90_15405"
     CDS             complement(187..915)
                     /locus_tag="VLM90_15405"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HSQ14415.1"
                     /translation="MADPVLVTKENDITTIMLNRPEVGNRQSDTTWAQVTQMFDDAAK
                     SSRLIIFKGAGDDFCLGRDSMGVAPPNPGPEAYAVRERSETIFNLYCAIRNAKVPIVG
                     VVQGRAVGLGCALAALCDITIASDKARFSFPETAHKIMPTIAFSALVDRMPRKAATFM
                     IYSAQEIDADKALTYALVSDVVAHSELDAGVNRLVDHLKSMPLAAVLAVKEYARTAFS
                     LSTQAATDFARNLHATVNSYTGMR"
     gene            1137..1541
                     /locus_tag="VLM90_15410"
     CDS             1137..1541
                     /locus_tag="VLM90_15410"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HSQ14416.1"
                     /translation="MAEQTLQGSCLCKSVRYEVTTPFMRFGHCYCSRCRKATGGVRST
                     NIAVPIAQFRWTQGEELIKRFDLPEAKSFARQICSNCNCPIPHASRDGTRALVPSGTL
                     DDVPPGKPSVHGHWSSRVSFVASNESDLPCEN"
     gene            1543..1842
                     /locus_tag="VLM90_15415"
     CDS             1543..1842
                     /locus_tag="VLM90_15415"
                     /inference="COORDINATES: protein motif:HMM:NF024232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3817 domain-containing protein"
                     /protein_id="HSQ14417.1"
                     /translation="MLTTAVGRLRAVGMVEAVSFLLLLGVAMPLKYFAGLPLAVKIAG
                     WIHGLLFIAFGVCLLVAHGERRWPMRWTALVFVAALLPFGPFVIDRRLKIEQSKL"
     gene            1863..2045
                     /locus_tag="VLM90_15420"
                     /pseudo
     CDS             1863..2045
                     /locus_tag="VLM90_15420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_255440914.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC-related (seleno)protein"
BASE COUNT          386 a          573 c          648 g          477 t
ORIGIN      
        1 gcttcatcgg cagccttgcc ggcacgcttt tgttcaaccg ctaaccagcg cggagttttc
       61 gcgtggccct gaaagcgacg ctaaccgtgc cggcgttgca gctgctatat tcggccttgc
      121 gcaaaactct cagataatcg cctggtagtt ggaaatcgcg agatcccaat tgtttcgcaa
      181 ttttagttag cgcattcccg tgtagctgtt caccgtcgca tgcaaattgc gggcgaagtc
      241 ggtggcggct tgggtgctga ggctgaacgc cgtgcgggca tattctttga ccgcgaggac
      301 ggctgcgagc ggcatggatt tgagatggtc gaccagtcga ttgacgccgg cgtccaattc
      361 gctatgcgcg acgacatcgc tgaccagcgc gtaggtgagc gctttgtcgg cgtcgatttc
      421 ttgcgccgag tagatcatga aggtggccgc cttgcgcggc atgcggtcga cgagagcgga
      481 gaaggcgatg gtcggcatga ttttatgcgc ggtttccgga aacgaaaagc gcgccttatc
      541 gctggcgatg gtgatgtcgc acagcgccgc gagggcgcag ccgagtccaa cggctcggcc
      601 ctggacgacg ccgacgatcg gcactttggc gttgcgaatg gcgcagtaga gattgaagat
      661 cgtctcgctg cgctcgcgca cggcgtaagc ttccggaccg ggattcggcg gcgctacacc
      721 catggagtcg cggcccaaac agaaatcatc gccggcgcct ttgaaaataa tcagccgcga
      781 ggacttggcc gcgtcgtcga acatctgggt cacctgcgcc caggtggtgt cgctctggcg
      841 gttgccgacc tccggtcgat tcaacatgat ggtcgtgatg tcattttctt tggttacgag
      901 tacgggatca gccatgattc ttcctccaat gtttggtcgg ctcactttag gagaggcgtg
      961 gcgcagctgt caacggcttc aactgcgctg cgcgttccag tcgttccatg ggttccaatc
     1021 gttccacgtg ttcacatcgc tgatgatttg ccaatacgcg accctttcat cttgcgaaga
     1081 aattgttttc aaaatagagt ctcggccatt gaatatacca accgttggag ggtgttatgg
     1141 ctgaacaaac tttgcaggga agttgtttgt gcaaatcagt gcgctacgaa gtgaccacgc
     1201 cgttcatgcg cttcggccac tgctattgct cgcgctgccg caaggcgacg ggcggggtgc
     1261 gctcgaccaa tatcgcggtg ccgatcgcgc agtttcgctg gacccagggc gaagagctga
     1321 taaagcgatt cgacctgccg gaagccaaaa gtttcgcccg gcagatttgc agcaactgca
     1381 actgtccgat cccgcacgcg tcgcgtgacg gcacgcgcgc cctggttccc tccggtaccc
     1441 tcgatgatgt ccccccgggc aaaccttctg tgcacgggca ctggagcagc cgggtcagtt
     1501 tcgtcgctag caacgagtcg gatttgccgt gcgaaaatta gcatgttgac gacagcggtg
     1561 gggcggctgc gcgccgttgg catggtcgaa gcggtttcgt ttcttctgct gctgggcgtg
     1621 gcgatgccgc tcaagtattt cgccggcctg ccgctggcgg tgaagatcgc cggctggatt
     1681 catggattgc ttttcatcgc tttcggcgtg tgcttgctgg tggcccatgg cgaacgccgg
     1741 tggccgatgc gctggaccgc attggttttc gtcgcggcac tattgccgtt cgggccgttt
     1801 gtcatcgacc ggcggctcaa gattgaacaa tcgaagcttt aaatttagcg caaggagtaa
     1861 aaatggctga cgaaatgcaa gttaatcgcg atatcgttat cgaggccgac gcggaatcca
     1921 tcgagcgcat gcgcaaggaa gggcatgtgc gcggcttcac ggttttttgc gacgagcaac
     1981 aacgcaccgg cggcgacaac tcggcgccgt cgccgatggg ctatttcgca ctttcggtgg
     2041 cgttttgact gctcacccac gtttcccggt acggggaaat gatg
//
LOCUS       DATIRS010001203         1886 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1271316, whole genome shotgun sequence.
ACCESSION   DATIRS010001203 DATIRS010000000
VERSION     DATIRS010001203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1886
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1271316"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            154..1044
                     /locus_tag="VLM90_15425"
     CDS             154..1044
                     /locus_tag="VLM90_15425"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HSQ14418.1"
                     /translation="MADSDKNYFDPKVLAGIANLALRARWVVEGLLSGVHKSRAKGFS
                     VEFEEHREYSPGDEIRRIDWKALGKFDRYMIKEYEDETNLRAYLLVDGSASMNYASDG
                     ISKFDYACTLTASLAYLVLKQQDAAGVITFSNKIESFVPPRSKRDYLLQIIHALENRG
                     PAGETNVAKILDELAGQIRRRGLIVLISDLLDEPEPIIKGLRQFRFKGNDVIVFHLLD
                     QAELDLPFDGNILFEDLESANLQVIADPRAIRATYKEVVQEFVNDMRKQCHDSAIDYQ
                     LISTATPLDQALASYLSWRG"
     gene            1052..>1886
                     /locus_tag="VLM90_15430"
     CDS             1052..>1886
                     /locus_tag="VLM90_15430"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BatA and WFA domain-containing protein"
                     /protein_id="HSQ14419.1"
                     /translation="MSVFFLYPLFLFGLAAASLPVVIHLLNRRRLKRIRFPAVRFILL
                     SQKRISRSYRLRHWLLLALRTLAVICLALLLANPIFQTGAGLFAGGGPVSLVVILDNS
                     LSMTWSGDGNGFKQAKEAASLLIANLSDGDRAAVIPTNTNGKEAFRLKAQKDVLQKEI
                     AGSEIADGTADLPAALSKAYELLNQPAGQKEIRIVTDMALTGWDQFSVAALKQADPSI
                     PLKIIRIGRKQRPLNGAVKEIRLGGQGVGVNLPLQIEATVANFGGMEIKDLLVQLSID
                     GQ"
BASE COUNT          407 a          573 c          535 g          371 t
ORIGIN      
        1 ccggctcctg gccgacgtaa aagcctcgac agacgggaag gcgcgctagg gcgcggacgc
       61 ccattgcaaa tttccgatta caaattccaa attggccgga ttctttcgct ctggaatatg
      121 gaatctgtga tttggaatgc actcgagtaa gcgatggccg acagcgataa aaactacttc
      181 gaccccaaag tcctggcggg catcgccaat ctcgccctgc gcgcacgttg ggtggtcgaa
      241 gggctgcttt ccggcgtcca taagagccgc gccaaaggct tcagcgtcga gttcgaagag
      301 catcgcgagt attcgccggg agacgagatc cgccgcatcg attggaaggc gctcggcaaa
      361 ttcgaccgct acatgatcaa ggagtatgag gacgagacca atctgcgcgc ctacttgctg
      421 gtcgacggca gcgcgtcgat gaactacgcc tcggacggca tcagcaaatt cgactacgcc
      481 tgcaccctca ccgcatcgct cgcgtacttg gttctaaagc agcaggacgc cgccggcgtc
      541 ataactttct cgaacaagat cgaatcgttc gtcccgccgc gctccaagcg cgactatctc
      601 ttgcaaatca tccacgccct ggagaatcgc ggcccggctg gggaaaccaa tgtcgcgaaa
      661 atccttgacg agttggccgg gcagatccgc cggcgcggtt tgatcgtgtt gatctccgat
      721 ttgctcgatg agcccgagcc gattatcaaa ggactgcgac agttccgctt caagggcaac
      781 gatgtcatcg tgtttcacct gctcgaccag gccgagctcg atctaccctt cgacggcaat
      841 atcctgtttg aagatttgga aagcgccaat ctgcaagtga tcgccgaccc gcgcgccatt
      901 cgcgccacct acaaagaagt cgtccaagag ttcgtcaacg acatgcgcaa gcagtgccac
      961 gacagcgcca tcgactatca attgatctcc accgccacgc cgctggacca ggcgctggcg
     1021 agctatttga gctggcgagg ttaggcctgg catgtcggta ttttttctct atccgctgtt
     1081 tctcttcggc ctggccgcgg cgtcgctgcc ggtggtaatt cacctgctaa atcggcgccg
     1141 cttgaagcgc atccgcttcc ccgccgtacg cttcatcctg ctgtcgcaga aacgcatttc
     1201 acggagctat cgcttgcgcc actggctgct gttggcgctg cgcactctgg cggtgatctg
     1261 cctggcgctc ttgctcgcca atccgatttt tcaaaccggc gccggcctgt tcgccggcgg
     1321 cggtccggtg tcgctggtcg tcatactgga caattcgctg agcatgacat ggtctggcga
     1381 cggcaacggt ttcaaacaag cgaaagaggc ggcgagtctg ctcatagcga atttgagcga
     1441 cggcgaccgc gccgcggtga ttccaaccaa caccaacggc aaggaagcct ttcgcctgaa
     1501 agctcaaaaa gacgtgctgc aaaaggaaat tgccggcagt gaaatcgccg acggcacagc
     1561 cgatctcccg gcagcgttga gcaaagctta tgagctgctt aatcaaccgg cggggcagaa
     1621 agagatccgc atcgtcaccg atatggcgct cacaggatgg gatcagttct cggtcgccgc
     1681 gctcaagcag gccgacccgt cgatcccgtt gaagatcatc cgcatcggca gaaaacagcg
     1741 gccgctcaac ggcgcagtca aagaaatccg cctcggcggc caaggcgtcg gcgtcaacct
     1801 gccactgcag atcgaagcga cggtggccaa cttcggcggg atggaaatta aggacctgct
     1861 ggtgcagctc tccatcgacg ggcaaa
//
LOCUS       DATIRS010001204         1911 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1566178, whole genome shotgun sequence.
ACCESSION   DATIRS010001204 DATIRS010000000
VERSION     DATIRS010001204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1911)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1911)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1911
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1566178"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..596
                     /locus_tag="VLM90_15435"
     CDS             <1..596
                     /locus_tag="VLM90_15435"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ14420.1"
                     /translation="HEHDHEFTLRQALKTAAFWKLILATTTRVGVYNSITVHFVPIMV
                     WRGASEAKAAAMLATMALMSLPSHLLVGWIADRVDKPRLMAACMLLGAVAVAILAYGD
                     GEWALWVFTLLFTFVEALFPVSWATVGDYYGRKHFATIRGSMSFFYLWGPALGPVITG
                     LVYDRHQSYAPLMNAYIGVALVAGLLYASLRQPKPIA"
     gene            608..1885
                     /locus_tag="VLM90_15440"
     CDS             608..1885
                     /locus_tag="VLM90_15440"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ14421.1"
                     /translation="MLRRILDRLSGLYIGWRMIGVSCAIRVLGGGLHAYGLSVLFLPV
                     TQELGLTRTATSLVFSLARAQGAIEGPIAGYCIDRFGPRPVITIAVALAGIGYLLFAG
                     VHSYAMLLVVYMGIISLSYQAGFMDATMVVANTWFIRKRALAMSITSGSIALGGALLT
                     PFFAYAVHTWGWRAACIGSGIAFLLAGVPLSLLIQLSPESLGLLPDGAPPNAKPTGDG
                     VNKTTQQSAIATEYSLRDTLRTRQFWLLTLSTTLRATCSSAVLVHFVPILVWQGYSEP
                     QGAFYLGVIAFCGMPTHLLIGWLGDRMYKPRLMAGFMVLGSVSVYFLFQGTQAWQLWF
                     AVLLFSVFEGLFPVTWATVGDFFGRNNFAKIRGSMSFLYSWGSVLGPVIAGSIYDRTK
                     SYAVLFWVLLVTCWVTAALYAMLFQPGPRPKGD"
BASE COUNT          315 a          591 c          560 g          445 t
ORIGIN      
        1 agcacgaaca cgatcacgaa tttaccctca ggcaggcgct taaaaccgcg gcgttttgga
       61 aactgatcct ggcaacgacg acccgcgtcg gcgtgtacaa ctcgatcacg gttcatttcg
      121 tgccaatcat ggtctggcgc ggggccagcg aagccaaagc cgcggcgatg ctggcgacca
      181 tggcattgat gagcttgccg tcgcatttgt tagtcggctg gatcgccgat cgagtcgaca
      241 aacccaggct catggcagcg tgcatgcttc tcggcgccgt tgccgtcgcg atcctggcct
      301 acggcgacgg cgagtgggcg ctttgggttt tcacgctgtt atttactttt gtcgaagcgc
      361 tgttcccggt aagttgggcc acggtgggag attattacgg caggaaacat tttgccacga
      421 tccgcggcag catgagtttt ttctatctct ggggtccggc cttgggaccg gtcatcaccg
      481 gcttagtcta tgaccggcat cagagctatg cgccgttgat gaacgcttac atcggcgtcg
      541 cgctggtcgc cggcttgctc tacgcctcgc tgcgccaacc aaaaccgata gcgtaagcgc
      601 caaaccgatg ctgcgacgga ttctcgacag actctcaggc ctatatatcg gctggcgcat
      661 gatcggcgtc agttgcgcaa tccgcgtcct cggcggcgga ctgcacgctt atgggctgtc
      721 ggtgcttttt ctcccggtga ctcaagaatt gggactgacg cgcaccgcga cctctctggt
      781 gttttccttg gcgcgcgctc agggcgccat cgaagggccc atcgccggct actgcatcga
      841 tcgcttcggc ccgcgcccgg tcattaccat cgctgtggcg ctggccggca tcggctacct
      901 gctgttcgcc ggcgtgcaca gctacgccat gttgctggtc gtctacatgg gcatcatctc
      961 cttgtcgtac caagccggat ttatggacgc gaccatggtg gtggccaaca cctggtttat
     1021 ccgcaagcgt gccctagcga tgtcgatcac cagcggatcg attgctctcg gcggcgcgct
     1081 actcacaccg tttttcgctt acgccgtcca cacctggggc tggcgcgccg cctgcatcgg
     1141 atcgggcatc gccttcttgc tggcgggtgt gccgctctcg ctcttgattc agctctcgcc
     1201 ggaaagtttg ggcctattgc ccgatggcgc gccgcccaat gcgaagccga ccggcgacgg
     1261 tgtgaacaaa accacccagc agagcgcaat cgctacggaa tacagcttgc gcgatacttt
     1321 gcgcacccgt cagttttggt tgctcaccct ttccaccacg ttgcgcgcca cctgctccag
     1381 cgccgtattg gtacacttcg taccgatcct ggtgtggcaa ggatacagcg agccccaggg
     1441 cgcattctat ctcggcgtca tcgcgttttg cggcatgccg acgcatttac tcatcggttg
     1501 gttgggcgac cgtatgtaca agccccggct catggccggc ttcatggtac tcggcagcgt
     1561 atcggtttat ttcctatttc agggcacgca ggcatggcag ctgtggttcg ccgtgttgct
     1621 gttcagcgtc ttcgagggcc tcttcccggt gacctgggcc accgtcggag attttttcgg
     1681 ccggaacaac ttcgccaaga ttcgcggcag catgagtttt ctctacagtt ggggcagcgt
     1741 cctcggcccg gtgatcgccg gatcgatcta cgaccgcacg aaaagttacg cggtgctttt
     1801 ctgggtccta ttggtcacct gctgggtcac ggcagcgctt tacgccatgc tgttccagcc
     1861 gggtccccgc cccaaagggg actgagcgca tctcatggcg cagaatcttc t
//
LOCUS       DATIRS010001205         6947 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_680673, whole genome shotgun sequence.
ACCESSION   DATIRS010001205 DATIRS010000000
VERSION     DATIRS010001205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 6947)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6947)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6947
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_680673"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1679)
                     /gene="uvrC"
                     /locus_tag="VLM90_15445"
     CDS             complement(<1..1679)
                     /gene="uvrC"
                     /locus_tag="VLM90_15445"
                     /inference="COORDINATES: protein motif:HMM:TIGR00194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HSQ14422.1"
                     /translation="MNSLAEKLTGLPSRPGVYLMRETGGKVIYVGKAKDLRARVRAYF
                     NHPDERSQVQFLVRRVADIETLVTSNDKEALILENNLIKQYKPRYNIRLKDDKSYLSI
                     KVTTQHAWPRILATRKIVKDGNRYFGPFASALAARETIDLIEKHFQLRNCTDHNFRNR
                     SRPCLQYQIKRCLGPCVLPVAREIYLEQVRQTMLFIAGRQQELIDELKQRMREKSDGQ
                     EFEAAARLRDQIQAVEKTLEKQRMVAHWGSDQDIFGLYREGGFIEVQVLLVRQGKLTG
                     NQSYSLADLDFPDEEIMGSLLTQFYQGQRFFPDEILLPVDLEDAAVREEYLAEHKGKN
                     VKILCPQRGDKRHLVDMAAANAKQCFADRHDREKTRDKMLRELQTSLRLKNYPHRVEC
                     FDISMIHGAHAVGSMVTFVDGEPDKNLYRHFRIKTIGAESGGDDFGMMLEMLKRRFSR
                     GKAEAALPALIVVDGGKGQLAMALAAMAEVGIDGVVAVGLAKMRVQAAPRSSEIERSE
                     ERVFLPGQTNPVVLKRNSNALFLLQRVRDEAHRFAITHHRKLRSQQTLYSAL"
     gene            1914..2333
                     /locus_tag="VLM90_15450"
     CDS             1914..2333
                     /locus_tag="VLM90_15450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14423.1"
                     /translation="MFEIETLMQLGVFNQLIPIWQVFFFIAALLPFLLMDRVKMCLLV
                     TYLFTFYLGFMVQWGEYLSSTGSMQPFVLYSLSGLAIAVFFVATIFTDPAPSAKVRWV
                     RYGQADRNTAEGPVPKAPHDPMEIAVDVTHVSEYERH"
     gene            complement(2346..4388)
                     /gene="uvrB"
                     /locus_tag="VLM90_15455"
     CDS             complement(2346..4388)
                     /gene="uvrB"
                     /locus_tag="VLM90_15455"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: protein motif:HMM:NF003673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HSQ14424.1"
                     /translation="MLRDQDSGQFKLVSEFQPQGDQPQAIDKLVKGLTAMRRHQVLLG
                     VTGSGKTFTMANVIARVNRPTLVIAPNKTLAAQLYEEFRTLFPDNAVRYFVSYYDYYQ
                     PEAYLPASDTYIEKDSSINDEIDKLRHSATKALLERRDTLIVASVSCIYGLGSPEAYF
                     ELMVYVEEGTTVNRDQMLRKLVDIQYQRSDYDFHRGTFRVRGDMVEIFPAYEDRSALR
                     IEFFDETIESINEIDPIRGKILRRVDKATIYPASHYVTGQERRKQAVLAIRLELKARL
                     KELQDQHKSLEAQRLQQRTLYDLELLEEMGFCPGIENYSRHLTGRQPGEPPPTLLSYF
                     PNDFLLMVDESHVTVPQIGGMYRGDRSRKETLVAYGFRLPSALDNRPLNFDEFAAMID
                     QTIYVSATPAPFELRESNGAVIEQVIRPTGLMDPAILVRPARTQVDDLLEEIRKRVER
                     KERVLVTTLTKRMAEDLTEYYQDLNVKVRYLHSDIETLERVEIIRQLRSGQFDVLVGI
                     NLLREGLDLPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGTVILYADGVTDSM
                     KRAMDETERRRRLQAGFNKKHGITPQTIVKALSSPLVKIYDADYADIPLAADGAAHYG
                     PGEISRKLRKLQKEMKEAAQKLEFERAAELRDQIRQLQSQELMLRDSPLDSSVGSD"
     gene            complement(4401..5360)
                     /locus_tag="VLM90_15460"
     CDS             complement(4401..5360)
                     /locus_tag="VLM90_15460"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14425.1"
                     /translation="MAGSVGEVSAQAKSDKLRIGYAARAVAHSVPFVAKEAGFFAEEG
                     INAEIIHTAGSIAPMALVANEVDMTIMSAYLMIPVSAQNRDIVMLGGFSRYATMVFVA
                     RPDIKSAQDLKGKIVGIQRPGDAYEKSARFALKHIGLDADRDVKLLALGSNDVMWGAL
                     HTNRVAATVLSPPGTLFARRAGMNFMVDLTDLKLEYQGSTITTRRSLVQKNPQLAARA
                     MRAIVRGVHLFRTRKDDTTRILSKFLGTKDPEGLTESWEWAAKMPAKPYAVESAVQAV
                     LDHLAEGQPKYAQYKPGEFIDARTLSDIDKSGYIDKLYGGQAR"
     gene            5521..5916
                     /locus_tag="VLM90_15465"
     CDS             5521..5916
                     /locus_tag="VLM90_15465"
                     /inference="COORDINATES: protein motif:HMM:NF018508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YkvA family protein"
                     /protein_id="HSQ14426.1"
                     /translation="MSRFIEYFKAQARALKRETRDLYLAGRDPRTPWHAKVVIALVVA
                     YALSPIDLIPDFIPVLGYLDDVLLLPLGIYLALKLIPAAVLADARRAAHQASFNLSAS
                     RAAAVVIILLWMISMTVGGVLVLRYFDAV"
     gene            complement(5926..>6947)
                     /locus_tag="VLM90_15470"
     CDS             complement(5926..>6947)
                     /locus_tag="VLM90_15470"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HSQ14427.1"
                     /translation="TTANPWDRGRISGGSSGGSAASVAASLCLGSIGTDNAGSVRHPA
                     SLCGVVGLKATFGRVSRYGGVLGTGGFSTDHFGPFAKTVKDCALMLKAIAGHDLKDPL
                     SSREPVANYTGAIGKSVKGLRVGLISGYFDEFMSAAVRDAFDAAVGQLKTLGMKVVKL
                     DIPYTDLVAAVQLATSRVENVATAHDYLKNSPRDYSAPLFYRHIKSLLIPADVYVTAQ
                     RVRRLICEAFEAAFDKVDVMVAPTVGSPAQTIDECRQGFAIVDGRRVELQDERGTTGT
                     LCTIPFNVTGLPAMSLCCGFSASGLPIGMQIIGAPFDEARLFQVGHAYEQAAGWFGKR
                     PNLDG"
BASE COUNT         1399 a         2121 c         1953 g         1474 t
ORIGIN      
        1 agagcggagt aaagagtctg ctgcgagcgc aatttccgat gatgggtgat ggcgaagcga
       61 tgggcttcgt cgcgcacgcg ctgcagcaga aacaaagcgt tggagttgcg cttcaagacc
      121 accggattgg tttgacccgg caggaacacg cgctcttccg agcgctcgat ctcggagctc
      181 cgcggcgctg cttgaacccg catcttggcc aagcccaccg ccacgacgcc gtcgatgccg
      241 acttcggcca ttgccgccaa agccatggcc aattgcccct tgccgccgtc gacgacgatc
      301 aaggccggta gagcggcttc tgccttgccg cggctgaagc ggcgcttgag catctccagc
      361 atcatgccga agtcatcgcc gccggactcc gcgccgatgg ttttgatgcg aaaatggcgg
      421 taaagatttt tgtccggttc gccgtcgacg aacgtcacca tggagcccac cgcatgggcg
      481 ccatgaatca tcgagatatc gaagcactcg acgcgatggg ggtaattttt caaacgcagg
      541 gaggtttgca actcgcgcag catcttgtcg cgggtttttt ctcgatcgtg gcggtcggcg
      601 aaacattgct tggcattggc ggccgccatg tccaccaagt ggcgtttatc gccgcgctgg
      661 ggacaaagaa tttttacgtt cttaccttta tgctcggcaa gatattcctc gcgaacagcg
      721 gcatcctcga gatccacggg caaaagaatc tcgtcgggga agaatcgctg gccttgatag
      781 aactgggtca agagcgaacc catgatctct tcgtcgggaa agtccaaatc tgccaacgaa
      841 taagactggt tgccggtgag cttgccctgg cgcaccaaca gcacctgaac ttcgatgaag
      901 ccgccctcgc ggtacaagcc gaagatatcc tgatcgctgc cccagtgcgc gaccatgcgc
      961 tgcttctcca aagtcttttc gaccgcttga atttgatcgc gcagccgcgc cgccgcctcg
     1021 aactcttgac catcggactt ttcccgcatg cgctgcttca actcgtcgat cagctcctgc
     1081 tgccgccctg cgataaacag catggtctgg cgcacttgtt cgaggtaaat ctcccgcgcc
     1141 accggcagca cacagggccc caagcagcgc ttgatctgat actgcaaaca gggacggctg
     1201 cggttgcgaa agttgtggtc ggtgcagttg cgcagctgaa agtgtttctc aatcaagtcg
     1261 atggtctcgc gcgccgccag cgccgacgca aacggcccga agtagcggtt gccgtccttg
     1321 acgatcttgc gcgtcgccag gatgcgcggc caggcgtgct gggtggtcac tttgatgctc
     1381 aaataactct tgtcgtcctt gaggcggatg ttgtagcgcg gcttgtactg cttgatcagg
     1441 ttgttttcca ggattagcgc ttccttgtcg ttgctcgtca ccagggtttc gatatcggcg
     1501 acgcggcgca ctaaaaactg aacttgcgag cgttcatcgg gatgattgaa gtaagcccgc
     1561 acccgcgccc gcaaatcctt ggccttgccg acataaatga ccttgccgcc ggtttcacgc
     1621 atgaggtaga cgccgggtct ggacggcaaa ccggtaagtt tttctgctag cgaattcatg
     1681 ccgtgtccaa tcaattactt tccaacgatc ggttccggaa gaacaagtgg gctctcatta
     1741 acaacaacca cgcgcgtgac cacgaaccaa tggcggggaa ttgaatcacc gacactgcca
     1801 aattacgaca aggcacgaca acagatgcgg cgatgcatcg ttggcataac tcttgagtag
     1861 aaatccggct aatcacgcag aattcacgac aggccaagga ccaaggagcc gccatgttcg
     1921 aaatcgaaac attgatgcaa ttgggtgtgt ttaaccagct cattcccatc tggcaggtgt
     1981 tctttttcat tgccgcactg ctgccgttcc tgctcatgga ccgggttaag atgtgcctgc
     2041 tggttaccta tctgtttacc ttctatctcg gcttcatggt tcaatggggc gaatatctat
     2101 cctccaccgg ctccatgcaa ccctttgtcc tctattcgct cagcggtctc gccatcgcgg
     2161 tgttcttcgt cgccaccatt ttcaccgatc ccgcccccag cgccaaagtg cgctgggtcc
     2221 gctacggtca agcggaccgc aacactgccg aaggaccagt ccctaaagcg ccccacgatc
     2281 ccatggaaat agcggtcgat gtcacccacg tctccgagta tgaacggcac tgattctaag
     2341 cttgtttaat cgctgccgac actggagtcg agcggtgaat cgcgcagcat caactcctgg
     2401 ctttgcaatt ggcggatctg gtcgcgcaat tccgccgcgc gctcgaattc caacttttgc
     2461 gccgcctctt tcatttcctt ctgcaatttg cgcaatttcc ggctaatttc ccccgggccg
     2521 tagtgcgccg ccccgtcggc tgctagcgga atgtcggcat agtcggcgtc gtagatcttc
     2581 accagcggcg aactcaacgc cttgacgatg gtttgcggcg tgatgccatg cttcttattg
     2641 aaccccgcct gcaaccgccg ccgccgttcg gtttcgtcca tggcgcgctt catcgagtcc
     2701 gtgacaccgt cggcgtagag aatcaccgtg ccgttgacgt tgcgcgcggc ccggccgatg
     2761 gtctggatca acgaccgctc cgagcgcaga aagccttcct tgtcggcgtc gagaatcgcc
     2821 accaacgata cctccggcaa atccaaccct tcgcgcagaa gattgatgcc gaccaagacg
     2881 tcgaactggc cgctgcgcag ttggcgaatg atctcgaccc gctcgagggt ttcaatatcc
     2941 gagtgcaggt agcggacctt gacgttgaga tcttgatagt actcggtcag atcctctgcc
     3001 atgcgcttgg tcagcgtcgt caccagtacg cgctccttgc gctcgacccg tttgcggatc
     3061 tcctccaaca gatcgtcgac ctgcgtgcgt gcagggcgca cgaggatcgc cgggtccatc
     3121 aaacccgttg gacgaatcac ttgctcgatc accgcgccgt tgctctcgcg cagctcgaag
     3181 ggcgccggcg tcgccgagac gtaaatcgtc tgatcgatca tcgccgcgaa ctcgtcgaaa
     3241 ttgagcggcc ggttatcgag ggccgacggc aagcggaagc cgtatgcgac caaggtttct
     3301 ttgcgcgagc ggtcgccgcg gtacatgccg ccgatctgcg gcacggtgac gtggctctcg
     3361 tcgaccatca ggagaaaatc gttgggaaag taacttaaca acgtcggcgg cggctcgccc
     3421 ggctggcgcc cggtcaagtg gcgcgaataa ttttcaatgc cggggcagaa gcccatctct
     3481 tcaagcagct cgagatcgta aagcgtgcgc tgctgcaagc gctgcgcttc caacgatttg
     3541 tgttgatcct gcagctcctt taaccgcgct tttagctcca ggcgaatcgc cagcaccgcc
     3601 tgtttgcggc gctcttgacc ggtcacgtaa tggctcgccg gataaatcgt cgccttgtcg
     3661 acccgccgca ggatcttgcc gcggattggg tcgatctcgt tgatcgactc gatggtttcg
     3721 tcgaaaaact cgatgcgcag ggccgaacgg tcttcgtagg cgggaaatat ttcgaccatg
     3781 tcgccgcgca cgcgaaaagt gccgcgatga aaatcgtaat cgctgcgctg gtactgaata
     3841 tcgaccagct tgcgcagcat ctggtcgcga ttgaccgtcg tgccctcttc gacgtagacc
     3901 atcagttcaa agtaagcttc cggcgaacca aggccgtaga tgcacgacac gctggcaacg
     3961 atcaatgtgt cgcgccgttc gagcagcgcc ttggtcgccg agtggcgcag cttgtcgatc
     4021 tcgtcattga tcgacgaatc cttctcgata taagtatcgc tggcgggaag gtaagcctcg
     4081 ggctggtagt aatcgtagta gctgacgaag tagcgcacgg cgttatccgg gaacagagtg
     4141 cgaaactctt catagagctg cgccgccagc gtcttgttcg gcgcgatcac cagggtcggc
     4201 cggttcaccc gggcaatcac gttagccatc gtgaaggtct tgcccgagcc ggtaacgccc
     4261 aacaacacct ggtggcgccg catggccgtt agtcccttaa ccagcttatc gatcgcctgg
     4321 ggttgatcgc cctgcggttg gaactcggaa accagcttga actggccgct gtcttgatcg
     4381 cgtaacatcg ccggttgatc ttatcgcgcc tggccgccgt aaagtttatc gatgtaaccg
     4441 ctcttgtcga tatcgctgag cgtgcgtgcg tcgatgaact cgcccggttt gtactgcgcg
     4501 tacttgggct ggccttccgc cagatgatcc aacaccgcct gcaccgcgct ctccaccgcg
     4561 taaggtttag ccggcatttt tgccgcccac tcccaagatt cggtcaaacc ttccgggtcc
     4621 ttggtgccga ggaatttgct gagaatcctc gtggtgtcgt ctttgcgcgt ccggaacaga
     4681 tggacaccgc ggacgattgc gcgcatcgcg cgcgccgcca gctgggggtt tttctgaact
     4741 agcgagcggc gcgtcgtgat cgttgagcct tgatattcca gcttcaagtc ggtcagatcg
     4801 accatgaaat tcatgccggc cctgcgcgcg aaaagtgtgc cgggcggcga caacaccgtc
     4861 gccgccacac gattggtatg gagcgcgccc cacatcacgt cattgctgcc gagggcaagc
     4921 agtttgacgt ccctgtcggc atccaggccg atatgcttca aggcgaagcg cgcgctcttt
     4981 tcataggcgt cgccgggacg ctgaatgcca acgatcttgc ccttgagatc ttgggcgctt
     5041 ttaatatccg ggcgggcgac gaagaccatg gtagcgtagc gcgaaaatcc gccgagcatg
     5101 acgatatcgc gattctgcgc cgacacggga atcatcagat aagccgacat gatcgtcata
     5161 tcgacttcat tcgccaccag tgccatcggc gctatggacc ccgccgtatg gataatctct
     5221 gcgttgatcc cttcctcggc gaagaagccc gcctccttgg cgacgaacgg caccgagtgg
     5281 gccacggcgc gggcggcgta accgatgcgc agcttgtcac ttttagcctg cgccgacacc
     5341 tctccgaccg aacccgccac tattaggcaa aggcaaacaa ttatcgaacc ggcaaacaac
     5401 ttcaaggtag agcctccggt gtgttatggc agaacttaga tcatgagaac aagatgctgg
     5461 tgagaagaat aacaagacca taggcacgga gcaacgacgg cctggaatca cagcgctaag
     5521 atgagcagat ttatcgaata ttttaaggca caagcgcggg cgctcaaacg cgaaacccgc
     5581 gacctctatc tcgccggccg cgatccgcgc acgccctggc acgctaaagt ggtcatcgcc
     5641 ctcgtggtcg cgtacgcttt gagtccgatt gatttgattc cggacttcat cccggtgttg
     5701 ggttatctgg atgacgtctt gttgctaccg ctcggcatct atctggcgct caagcttatc
     5761 cccgccgcgg tcctggctga cgcccggcgc gccgctcatc aagctagctt caatttgtcc
     5821 gcgagccgcg ccgcagccgt cgtgattatc ctgctttgga tgatcagcat gacggtcggc
     5881 ggcgtattgg tgctccgtta ctttgacgcg gtttgagaaa accgatcaac catcgagatt
     5941 cggccgcttg ccgaaccagc cagccgcctg ctcgtaagcg tggcccactt gaaacagccg
     6001 cgcctcgtcg aaaggcgcgc cgatgatttg catgccaatc ggcagaccgc tggccgaaaa
     6061 gccacagcat aaactcatcg ccggcaggcc ggtgacgttg aagggaatcg tacagagggt
     6121 tccggtagtg ccgcgctcat cttgtagctc gacgcgccga ccgtcgacga tggcgaaacc
     6181 ttggcggcac tcgtcgatag tttgcgccgg tgagcccacc gtcggcgcca ccatgacgtc
     6241 gactttgtcg aaggccgctt cgaaggcctc gcagatcagt cgccgcaccc gctgcgccgt
     6301 cacgtaaaca tcggcgggaa tcagcaacga cttgatatgc cggtagaaca gcggcgcgct
     6361 gtagtcccgc ggtgagtttt tcaaataatc atgagcggtc gcgacgttct cgacgcggct
     6421 agtcgccaac tgcaccgcgg cgaccaggtc ggtataggga atatcgagct tgacgacctt
     6481 catgccgagg gttttcaact gcccaaccgc agcatcgaac gcgtcgcgca ccgccgcgct
     6541 catgaattca tcgaagtagc cactgatcag ccccacgcgt aatcctttga cagacttgcc
     6601 aatggcaccg gtatagttcg ccaccggctc tcgcgaactc agcggatctt ttagatcatg
     6661 gccggcgatc gccttgagca tcaaggcgca gtccttgacc gtcttggcaa acggcccaaa
     6721 gtgatccgtc gaaaatccac ccgtgccgag cacgccgccg tatcggctga ctcggccaaa
     6781 ggtcgccttc aatccgacca caccgcaaag cgacgccgga tggcgcaccg atccggcatt
     6841 atccgtaccg atggaaccca agcagagact ggccgccacc gacgccgccg aaccgccgct
     6901 cgacccgccg gaaatgcgcc cgcgatccca aggattggcg gtcgtgc
//
LOCUS       DATIRS010001206         1849 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1957017, whole genome shotgun sequence.
ACCESSION   DATIRS010001206 DATIRS010000000
VERSION     DATIRS010001206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1849)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1849)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1849
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1957017"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..839
                     /locus_tag="VLM90_15475"
     CDS             <1..839
                     /locus_tag="VLM90_15475"
                     /inference="COORDINATES: protein motif:HMM:NF012640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="anthranilate synthase component I family
                     protein"
                     /protein_id="HSQ14428.1"
                     /translation="KFRSNLTKEGFQNAVTKAKEYIKAGDIIQVVLCQRLETETATDP
                     FEIYRALRFVNPSPYMFYLELEDLRVIGSSPETMVRLTDGTIELRPIAGTRRRGATAE
                     EERELEVDLLADPKERAEHIMLVDLGRNDVGRVAAIGSVEVNELMAIERYSHVIHIVS
                     NVRGKLAVDKTPFDLFVSAFPAGTVSGAPKIRAMQIISELEPQKRGLYAGAIGYFGYN
                     GNLDTCIVIRTIVMKGKKVFISAGAGIVADSDPELEYQETLNKARAMLKAVELAETLR
                     KR"
     gene            836..1402
                     /locus_tag="VLM90_15480"
     CDS             836..1402
                     /locus_tag="VLM90_15480"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: protein motif:HMM:NF012345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HSQ14429.1"
                     /translation="MILLIDNYDSFTYNLYHYLGELGADVKVFRNNKITLDEIARLKP
                     EKIVISPGPCTPKEAGISCETILRFGEHVAILGVCLGHQAIGAAYGGTIVRAPSIMHG
                     KLSDVTHDAQTIFRDVKNPFAAMRYHSLVIDPNTLPADLTVTARTADGVIMAVRHKKF
                     PVEGVQFHPDSILVEEGKKLLRNFLDYY"
     gene            1415..1834
                     /locus_tag="VLM90_15485"
     CDS             1415..1834
                     /locus_tag="VLM90_15485"
                     /inference="COORDINATES: protein motif:HMM:NF020489.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonyl-tRNA synthetase editing
                     domain-containing protein"
                     /protein_id="HSQ14430.1"
                     /translation="MKLLCFQAKRFRWKSHSKTLAEVPDQAIEQEIAETVVVFLHAET
                     DDTGADREKSVLRQTLKHIKWLANKRELKNVVLHSFTHLGGATAEPAFAEAFMNTLAE
                     RLRETGYQVWTTPFGYFCEWDLSVYGESLAKVWKEIR"
BASE COUNT          416 a          574 c          491 g          368 t
ORIGIN      
        1 gaaaatttcg ctcgaaccta accaaagaag gctttcagaa cgcggtcacc aaagccaagg
       61 aatacatcaa agccggcgac atcatccagg tcgtgctctg ccaacggctc gagaccgaga
      121 ccgccaccga cccgtttgag atttaccgcg ccctgagatt cgtcaatccg tcaccgtaca
      181 tgttctatct ggagctggaa gatttgcgcg tcatcggctc ttccccggag accatggtgc
      241 gcctcaccga tggtaccatc gagctccgtc ccatcgccgg cacgcgtcga cgcggcgcca
      301 cggccgaaga ggaacgcgag ctcgaagtcg atctactggc cgacccgaaa gagcgcgccg
      361 aacatattat gctggtggat ctcgggcgca acgacgtggg ccgggtcgcg gcgatcggca
      421 gcgtcgaggt caacgaactc atggccatcg aacgctactc ccacgtcatt cacatcgttt
      481 ccaacgtgcg cggcaaattg gccgtcgaca aaactccttt cgatcttttc gtttcggctt
      541 ttcccgccgg caccgtttcc ggcgcgccaa agatccgcgc catgcagatc atcagcgagc
      601 tggaaccgca aaagcgcggt ctctacgccg gcgccatcgg ttatttcggc tacaacggca
      661 acctggacac ctgcatcgtc atccgcacca tcgtgatgaa aggcaaaaag gtcttcatca
      721 gcgccggcgc cggcatcgtc gccgactccg atcccgagct cgagtatcag gaaacgctga
      781 ataaagctcg cgccatgctc aaagccgtcg agctcgccga aaccttgagg aagcgatgat
      841 cctgctcatc gacaactacg actccttcac ctacaacctc taccactatc tcggcgagtt
      901 gggcgccgac gtgaaggtat tccgaaacaa caagatcacc ctcgacgaga tcgcccggct
      961 gaagccggag aagatcgtca tatctccggg cccctgtaca cccaaagagg ccggtatttc
     1021 ttgcgaaacc attctgcgct tcggcgagca tgttgccatt ttaggcgtct gcctcggcca
     1081 tcaggccatc ggcgccgcct atggcggcac catcgtgcgc gcgccgtcga tcatgcacgg
     1141 caaactttcc gatgtgactc acgacgcgca aacgatcttt cgggacgtca aaaacccctt
     1201 cgccgccatg cgctaccact cgttggtgat cgatccgaac acgctgccgg ccgatttgac
     1261 cgtcaccgcg cgcacggcgg acggcgtgat catggcggtt cgtcacaaaa agtttcccgt
     1321 cgaaggcgtg cagtttcatc cggattcgat ccttgtcgaa gaaggcaaaa agctgctgcg
     1381 gaattttctc gattactact agggcaatcg cgtcatgaag cttctgtgct ttcaggctaa
     1441 gcgctttcgc tggaagagcc actcgaagac gcttgccgaa gttcctgacc aagcaatcga
     1501 gcaagagatc gctgagacgg ttgtcgtttt cctccatgcc gagactgacg acaccggcgc
     1561 agaccgcgaa aagtcggtgc tgcgccagac gcttaagcat atcaaatggc tcgccaacaa
     1621 acgcgagctt aagaacgtcg tgctccactc tttcacccac ttgggcggtg ccaccgccga
     1681 accggccttt gcggaagctt tcatgaacac tctagccgag cgcctgcgcg aaacgggtta
     1741 tcaagtctgg accacgccgt tcggttactt ttgtgagtgg gacttgagcg tttacggtga
     1801 aagcctggcg aaggtttgga aagaaattcg ttaagacgaa atcgctacg
//
LOCUS       DATIRS010001207         3306 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1074810, whole genome shotgun sequence.
ACCESSION   DATIRS010001207 DATIRS010000000
VERSION     DATIRS010001207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3306
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1074810"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..753
                     /locus_tag="VLM90_15490"
     CDS             <1..753
                     /locus_tag="VLM90_15490"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HSQ14431.1"
                     /translation="QALSGMMSLVTDLDDPKVAGISFVDHSAGIFAAHGIMAALLARA
                     KTGVGQFIDVSLLQVAIAFIESHVSDYLNGGEAVSRENFPKGRIYSLLDCDKKPFMVH
                     LSGHNQAWEGLLKAGELDERVGDPRFATRKQRSDRHDEIVTMLRAAFVKKRRDYWLPR
                     LDANNIPNAPINTIQEVFDNPQIKHLGIPKQIEHPKMGVSNLVGSPINMSGTPPKFFR
                     PAPLLGENTEEILARLGYDGNAVKELKTNGVI"
     gene            828..2042
                     /locus_tag="VLM90_15495"
     CDS             828..2042
                     /locus_tag="VLM90_15495"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSQ14432.1"
                     /translation="MDFNVSADPPHVVEFRKEVGAWLAEQFKGHEHLRWSASWSTRED
                     ADEYKFRRGLAEKLGAKGWLFPLYPKQYGGAELTVDHQMVLETELFKYGLNLSHTFYT
                     LARIVAPVLIRWGTEEQKAEFLPAITKAQICVWQVLTEPHGGSDIANCQTKAIRDGDH
                     YVVNGQKVMVGHHLPPDYLWTLVCTNPQGKRHENLAWLHIPANLPGITIQHMNLMMGI
                     KNAVFFDNVRVPAKYLIGGENNGWKVASTHMELEHGGDGRIAVDPLIERVVEYCRNTH
                     IDGKPIIEDPRVRDLVADMTIELNTLRRFNQLIYWCRFAKKPHPYGGPQQRYFQRMLR
                     LRNGERLQAIMGADALVQNLSVHEVIDFEYAVRTGPGQLHGGGTLDTDRLIFARRLGL
                     GRPTKETAPETH"
     gene            2156..3277
                     /locus_tag="VLM90_15500"
     CDS             2156..3277
                     /locus_tag="VLM90_15500"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSQ14433.1"
                     /translation="MDLGLTEDQEMLKKVAADFVKAEVPAHQMTQWYKNKQVFRPEIL
                     KKAAELGWLGMMLPEEWGGAGLAPMDCAVVFEQLGHGPVPGPLFTSGILSAQMIFEAC
                     TDAQRKALLPALFSGKAIVIPAIADQSAYWGPEAVETRLSKTPSGYLMNGTKRFVFDA
                     DAATSFLCAARSEEGKVVFLLVDAKSPGITVTQHIGFFVSVFEVRFDQVVVTTENLLG
                     SSGASWATLEQALDRALPILSAYQVGATQEVFDFTCEYTRTRVVFGQPIGRFQRVQDH
                     CVDISICLDTARWATYEAIWRLETGMDARAGVHEAKATASDGYYHGTNYAHMVWAGPG
                     TDYSHPMMAHSVLAHTLYQYLGTPGHHKRLMIDALYPRA"
BASE COUNT          741 a          972 c          951 g          642 t
ORIGIN      
        1 caggcgctga gcggcatgat gagcctggtc accgatctcg acgatcctaa agtcgccggc
       61 atctccttcg tcgaccactc ggccggcatt ttcgccgctc acggcatcat ggcggcgctt
      121 ttggcgcggg ccaaaaccgg ggttggccag tttatcgatg tctcgctctt gcaagtagcc
      181 atcgccttca tcgaatccca tgtttcggat tacttgaacg gcggcgaagc ggtgtcgcgg
      241 gagaattttc ccaaggggcg aatttacagc ctgctcgatt gtgataagaa accgttcatg
      301 gtccatctgt ccggccacaa ccaagcttgg gagggtctgc tcaaagccgg cgaactcgac
      361 gagcgcgtcg gcgatccgcg cttcgccacg cgcaagcagc gcagcgatcg tcatgacgag
      421 atcgtcacga tgctgcgcgc ggcgttcgtc aagaagcgcc gcgactactg gctgccgcgc
      481 ctcgacgcca acaacatccc caatgcgccg atcaacacga tccaggaagt gttcgacaac
      541 ccgcagatca aacatctggg catacccaaa cagatcgagc atcccaagat gggcgtgagc
      601 aatctggtcg gcagcccgat caacatgtcc ggcacaccgc caaagttttt tcgtcccgcg
      661 ccgctgctcg gggagaatac cgaagaaata ttggcgaggt tgggttacga cggcaatgct
      721 gttaaggaat tgaagaccaa cggagtgata taaattcgtt acgagtttcg cgttacaggt
      781 ttcgtctttt caacccgaaa ctgtgaacga ctgaaaagga gtgaattatg gattttaacg
      841 tcagtgcaga tccacctcat gtagtggagt ttcgcaaaga ggtcggcgca tggcttgccg
      901 agcagtttaa aggtcatgag catctgcgct ggtcggcctc ctggtcgacc cgcgaggacg
      961 ccgacgagta caagttccgc cgcggcctgg cggaaaaact cggcgccaag ggctggctgt
     1021 tcccgctcta tcccaaacaa tacggcggcg ccgaactcac cgtcgatcat cagatggtgc
     1081 tggaaaccga gctgtttaag tacggcctca atctctcgca cacgttttac accctggcgc
     1141 gcatcgtcgc gccggtgttg atccgctggg gcacggagga gcagaaggcg gaattcttgc
     1201 cggccatcac caaggcgcaa atctgcgtct ggcaggtgct caccgaaccc catggcggca
     1261 gcgacatcgc caactgtcag accaaggcga tccgcgacgg cgatcactat gtcgtcaatg
     1321 gtcaaaaagt catggtcggc caccacctgc cgccggatta cctgtggacg ctggtatgca
     1381 ccaaccccca gggcaagcgc catgaaaatc tcgcttggct gcatatcccg gccaatcttc
     1441 ccggcatcac gattcaacac atgaatctga tgatgggcat caaaaacgcg gtgttcttcg
     1501 acaacgtccg cgtgccggcg aaatacttga tcggcggcga gaacaacggc tggaaagtcg
     1561 ccagcaccca catggagttg gaacatggcg gcgatggccg catcgccgtc gacccattga
     1621 tcgaacgcgt cgtcgagtac tgccgcaata cccatatcga cggcaaaccg atcatcgaag
     1681 atccgcgcgt gcgcgacctg gtcgccgaca tgaccatcga gttgaacact ctgcgccgct
     1741 tcaatcaatt aatctactgg tgccggttcg ccaagaaacc gcatccctac ggcgggccgc
     1801 aacaacgtta ttttcagaga atgttgcgcc tgcgcaacgg cgagcgcttg caggcgatca
     1861 tgggcgccga cgccctggtg caaaatctat cggtgcacga agtcatcgac ttcgagtacg
     1921 ccgtccgcac cgggccgggc caactccatg gcggcggcac attggacacc gaccgattga
     1981 tcttcgcccg ccgtctcggc ctcggccgtc cgaccaaaga gaccgcgccg gagacgcatt
     2041 aattggacct ggggcaacag ataacaattg gaacatctgg aacgattgaa acacgagctg
     2101 ttttcgttcc aaggttccat aaggttccaa tggttccaaa cgtaggagaa aaacaatgga
     2161 tttaggttta accgaagacc aagaaatgtt gaaaaaagtc gcggcggatt tcgtcaaagc
     2221 cgaagtgccg gcgcaccaga tgacccagtg gtacaaaaat aagcaagtgt ttagaccgga
     2281 gattttgaag aaagccgccg agctcggctg gttgggcatg atgttgccgg aggaatgggg
     2341 cggcgctggc ttagcgccga tggactgcgc cgtggtattc gaacagttgg gccatgggcc
     2401 ggtgccgggg ccgctgttca cctcgggaat actcagcgct cagatgattt tcgaagcctg
     2461 taccgatgcg caaagaaaag cgctgctgcc ggcgttgttc agcggcaagg caatcgtcat
     2521 accggcgatc gccgatcagt ccgcctactg gggaccggaa gcggtcgaaa cccgcttgag
     2581 caaaaccccc agtggctatt tgatgaacgg caccaagcgt ttcgtctttg acgccgacgc
     2641 tgcgacgagc tttctctgcg ccgcgcgcag cgaggaaggc aaagtggtct tcttgctggt
     2701 ggacgccaaa agccccggca tcacggtgac tcagcatatc ggatttttcg tctcggtctt
     2761 tgaagtgcgc ttcgaccaag tcgtcgtcac gaccgagaac ctgctcggct cgagcggcgc
     2821 cagctgggca acgctcgaac aggccctcga cagagcgctg ccgattttgt cggcttacca
     2881 agtcggcgct acccaggaag tctttgactt cacctgcgag tacacccgca cccgggtggt
     2941 cttcggccaa cccatcggcc gctttcaacg cgtccaagat cactgcgtcg atatctcgat
     3001 ctgtttggac accgcgcgct gggcgaccta tgaagcgatc tggcgcttag agaccggcat
     3061 ggacgcccgc gccggtgtcc atgaggctaa agccaccgcc agcgacggct actatcatgg
     3121 caccaactac gcgcacatgg tctgggccgg accgggcacg gactacagcc acccgatgat
     3181 ggcgcacagc gtcctcgccc atacgctgta tcaatatctc ggcacgccgg gtcatcataa
     3241 acgattgatg atcgacgcgt tgtatccgag ggcgtagagt tgactgggtc gaggatggag
     3301 gatcga
//
LOCUS       DATIRS010001208         3757 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1664757, whole genome shotgun sequence.
ACCESSION   DATIRS010001208 DATIRS010000000
VERSION     DATIRS010001208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3757)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3757)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3757
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1664757"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1832)
                     /locus_tag="VLM90_15505"
     CDS             complement(<1..1832)
                     /locus_tag="VLM90_15505"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HSQ14434.1"
                     /translation="METSLAQPLSKPPERWIKSYCPYCGVGCGLLAGVRGGAVAKIKG
                     DADHPSSRGDLCLKAVYLPETLRTADRLLYPQIRSYQDGPFTRASWYQTMAYLAKRFQ
                     NITDEHGPDAVVFYGSGQLTTEEYYITNKLAKGFIGTNNFDTNSRLCMASAVAGYKTS
                     FGADGPPNSYADIDQANCLFLIGTNTADCHPVVFKRIKQRKQSAPNEVTIICVDPRRT
                     ETADFADLHLPIRSGTDIALLNAMLYVLLDENLIDRDFVARHTNGFGELIKCVKSYAP
                     KTVETICGIPECLIVEAALIFGKSAKALSLWSMGINQSSVGVHKNNAINNLHLITGKI
                     GKPGCGPFSLTGQPNAMGGREAGGLSHMLPGYRSVDNDMQRGEVERFWRRPLGSIAAR
                     PGLPALEQFEALAQGKVKALWILCTNPASSAPDLDMIEKALRQAELVIVQDAYHPTAT
                     TKFAHVILPAAQWSEKEGVMTNSERRVTYMPKLVDPPGEALPDWQIIARFAAALGFGA
                     DFTYASSQEIFAEYAALTKHTACDCSGMNYRKLKARPLQWPCPKNSRRDSTRLYADGK
                     FPSSDGRANFIPVMHAGPTEPVDADYPLVLNTGRSKYHWHTMTRT"
     gene            complement(1862..2830)
                     /locus_tag="VLM90_15510"
     CDS             complement(1862..2830)
                     /locus_tag="VLM90_15510"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: protein motif:HMM:TIGR01184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ14435.1"
                     /translation="MIPALEISQLGKSYDTAQGPAVIVKDFNLRVSDGEFVCIIGHSG
                     CGKSTVLSIAMGLNDATRGGIIIAGREVVGPGLDRGVVFQSSALLPWLSARENVLLAV
                     EQVNQRLSPRVRQALADKFLNAVGLNGAADSYPDELSAGMRQRVGIARALALEPKVLL
                     LDEPFSLLDAVTRMELQDQLMQLCAQENKTVLMVTHDVDEAILLADRIVMMTNGPAAS
                     VGEIVTVSFERPRDRMTILDDPHYHDVRQQLLSFLEERAGHERKAPAPLPKELATLSS
                     KHVTADELFMIEKLTGFNRFRGKYRRRAALPQAADEFAITPAKALN"
     gene            complement(2863..>3757)
                     /locus_tag="VLM90_15515"
     CDS             complement(2863..>3757)
                     /locus_tag="VLM90_15515"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ14436.1"
                     /translation="AFEFEDCHIVPLSRLKPALDHAHQPVENEADQSDGRGKSQSGKV
                     EVLRDINLSIRENEFVCIVGRSGAGKTTLISLIAGLIKADSGSILLEGRPVDGPGPDR
                     GVIFQNYSLLPWLSVFENVYLAVDAVAPNLSSAEKRQRTESYIHLVNLGAAMNKVPRE
                     LSGGMRQRVAVARGLAMEPRVLLLDEPFSALDALTRGTLQEELARIWTETRKTVVMIT
                     NDIDEAILLADTIYTLTAAPGATLGPAIIVDAAHPRGRVQLSGLASCQIARRETLKAL
                     TPSKADHGRASAHDPAAAIIQ"
BASE COUNT          738 a         1103 c         1119 g          797 t
ORIGIN      
        1 gtgcgcgtca tagtatgcca gtggtacttt gaacgtccgg tgttcagcac caacggatag
       61 tcggcgtcaa ccggctcagt cggcccggcg tgcatgacgg gaatgaagtt ggccctgcca
      121 tcgctcgacg ggaatttccc gtcggcatac aagcgcgtag aatctctacg gctgttcttt
      181 ggacagggcc actgcaacgg gcgagctttc agcttgcgat aattcatccc cgagcaatcg
      241 caagccgtat gttttgtcag cgcagcatat tccgcgaaga tttcctgcga cgaggcgtaa
      301 gtgaaatcgg cgccgaagcc caacgccgcg gcgaaacgcg caatgatttg ccagtctggc
      361 agcgcttcac cgggcgggtc gacaagcttc ggcatgtagg tgacacggcg ctcggaattg
      421 gtcatgacgc cttctttttc actccactgg gccgcgggga gaatgacgtg agcaaacttg
      481 gtggtcgctg tcggatgata ggcgtcctgg acaatcacta gctcggcttg gcgtaaggct
      541 ttctcgatca tatcgagatc cggcgccgat gacgccgggt tggtgcagag aatccacagc
      601 gctttcacct taccttgcgc caacgcttcg aactgttcca gcgccggcag accgggcctg
      661 gccgcgatcg agcccaatgg ccggcgccaa aatctttcca cttcgccgcg ctgcatgtcg
      721 ttgtcgacac tgcgatagcc gggcaacata tgagacaagc cgccggcttc gcggccgccc
      781 atggcgttgg gctgtccggt gagcgagaac ggcccgcagc cgggcttgcc gatcttgccc
      841 gtgatgagat gaagattgtt gatcgcgttg ttcttgtgca cgccgacgct gctctgattg
      901 atgcccatgc tccagagcga aagcgccttg gccgacttgc caaagatcag cgccgcctcg
      961 acgatcagac actcggggat gccgcagatc gtttcaactg tctttggcgc gtatgacttg
     1021 acgcatttta tgagttcgcc aaacccgtta gtatggcgcg cgacaaaatc gcggtcgatg
     1081 agattctcgt cgagcaagac atagagcatg gcgttgagca gggcaatatc ggtccccgaa
     1141 cgtatcggta gatgcaaatc ggcaaagtcg gcggtctccg tgcgccgtgg gtcgacgcag
     1201 atgatcgtga cctcgttggg cgcgctctgc ttgcgctgtt tgatacgctt gaagaccacc
     1261 ggatggcagt cggccgtgtt cgtgccgatc aggaaaagac aattagcctg gtcgatatcc
     1321 gcgtaagagt tgggcgggcc gtcggcgccg aaagaagttt tgtatccggc caccgccgaa
     1381 gccatacaaa gacgagaatt ggtgtcgaag ttgttggtgc caatgaaacc tttggcgagc
     1441 ttgttcgtga tgtaatactc ttccgtggtc agctgcccag agccatagaa aaccacggcg
     1501 tccggtccat gctcgtcggt aatattctga aatcgttttg ccaagtacgc catggtctga
     1561 taccaggacg cgcgcgtgaa cggaccgtct tggtaggaac ggatctgcgg atagagcaag
     1621 cgatccgcgg ttcgcaaagt ctcgggtaaa tagaccgctt tgaggcaaag atcgccgcgg
     1681 ctcgatggat ggtccgcatc ccctttgatt ttcgccaccg cgccgccgcg cacgccggcg
     1741 agcagcccgc aaccgacacc gcaataggga cagtaactct tgatccagcg ctcgggaggt
     1801 ttgcttaatg gctgagctag gctggtttcc acattgattc atcctgttga agccaacacc
     1861 gtcagttgag cgccttcgct ggcgtgatgg caaattcatc ggcggcctga ggcaacgccg
     1921 cgcggcggcg atacttgccg cggaagcggt taaaccccgt cagtttttcg atcatgaaca
     1981 attcgtcggc agtcacgtgc ttagatgata atgtcgcaag ctcctttggc agtggcgcgg
     2041 gcgccttgcg ctcgtggccg gcccgctctt cgagaaaact caagagctgt tggcgcacgt
     2101 cgtgataatg cggatcgtcc aggattgtca tgcggtcgcg cggtcgttcg aaggacaccg
     2161 taacgatctc gccgacgctg gccgccggtc cgttggtcat catgacgatg cggtcggcga
     2221 gcaagatcgc ttcgtcgacg tcgtgggtga ccatgagaac tgtcttattt tcttgcgcgc
     2281 acagctgcat caattggtct tgcagctcca tgcgcgtgac cgcgtcgagc aagctaaacg
     2341 gttcgtcgag gagcagcacc ttgggttcca acgccaatgc gcgggcgatg ccgacgcgct
     2401 ggcgcattcc ggcggacaat tcatcgggat agctatcggc ggcgccgttc aatcccacgg
     2461 cgttgagaaa cttatccgcc aacgcttgac gcactcgcgg cgacaagcgc tgattgacct
     2521 gctcgaccgc gagcaataca ttttcccgcg cgctcagcca aggcaaaagc gccgaagatt
     2581 gaaacactac gccgcggtcc aaaccggggc cgaccacttc ccgcccggcg atgatgatgc
     2641 cgcctcgggt ggcgtcgttg agccccatgg cgatcgataa aaccgttgat ttgccgcagc
     2701 ccgaatggcc gatgatgcag acaaactcgc cgtcgctgac gcgcaagtta aagtctttga
     2761 cgatcaccgc tggcccctgt gcagtatcgt agctcttgcc aagttggctg atttcaagtg
     2821 ctggaatcat gtcgctaatt tcccctgtct atcgctgccg gcctactgga taatcgccgc
     2881 cgctgggtca tgagcgctcg cccggccatg atcggccttg ctcggagtga gggctttgag
     2941 cgtttcgcgc cgggctattt gacagctcgc aagcccactc aactgcaccc gcccgcgcgg
     3001 atgggccgcg tctacgatga tagccggtcc gagcgtcgct cctggtgcgg cggttagcgt
     3061 atagatggtg tcggcgagca aaatcgcttc gtcgatatcg ttggtgatca tcaccacggt
     3121 cttgcgggtt tcggtccaga tgcgcgccag ctcttcttgc aacgtgccgc gcgtcagcgc
     3181 atcgagcgcg ctgaacggct cgtctagaag caagactctc ggctccatcg ccagaccgcg
     3241 cgccaccgca acgcgctggc gcatgccgcc ggaaagctcc cgcggcacct tgttcatggc
     3301 tgcgccgagg ttgactaagt gaatataact ctcggtgcgc tgccgtttct cagccgacga
     3361 taagttcggc gccactgcgt ccaccgccag gtaaacgttt tcaaacacgc tgagccaagg
     3421 cagcaaagaa tagttttgaa atatcacgcc gcgatccggt cccggcccgt cgaccggcct
     3481 gccttcgagc aggatcgatc ctgaatcggc tttgataagg ccggcgatca gcgagatcaa
     3541 cgtggtcttg cccgcacctg atcggccgac gatgcagacg aactcgtttt cacgaatcga
     3601 caagttgatg tcgcgcagca cctcgacttt accgctctgc gacttccccc ggccatcgga
     3661 ctgatcggct tcgttctcga ccggctgatg ggcgtggtcg agcgccggtt taagtcggct
     3721 taaggggaca atgtggcaat cctcgaactc aaaggcg
//
LOCUS       DATIRS010001209         2545 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_90517, whole genome shotgun sequence.
ACCESSION   DATIRS010001209 DATIRS010000000
VERSION     DATIRS010001209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2545
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90517"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..725
                     /locus_tag="VLM90_15520"
     CDS             <1..725
                     /locus_tag="VLM90_15520"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HSQ14437.1"
                     /translation="YNGRVILNQLSFEVYRGEVFVILGGSGCGKSTLLTHMIGLYAPA
                     AGTILIDGDNVATVEGLARQRLLRKFGVMYQSGALFGSMTVLDNVCLPLQEFTDLPPD
                     AIRLIASMKLQRVGLGGFDDHMPSELSGGMQKRAAIARAMALDPQVLFLDEPSAGLDP
                     ITSAELDDLILSLARSLKITFVIVSHELASIFAIADRVIMLDKSVKGIVATGKPQELR
                     DRSDNPWVRQFFSRQPSADNPT"
     gene            766..1824
                     /locus_tag="VLM90_15525"
     CDS             766..1824
                     /locus_tag="VLM90_15525"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HSQ14438.1"
                     /translation="MEKASYFKIGLFIIVGTIIGAIGVVALGVGTIFQKKVLVETYID
                     ESVQGLDVGSSVKFRGVQVGKVETISLTSAEYPTKRRYVLVRIGLTTKIFQAPLSDAG
                     SPSFMTEVEKGLRVRLASQGVTGAAYIEADYQDPARNPPLEIDWQPIYPYVPSTLSRI
                     TQLSESVEKILRSMENIDVGRLVDGLEKSLLTITKVAQGANFDKLGGQADAFLTEVRD
                     TNRQLKELIGSSEIKSAFKDSAAAASGARQIIERAQGPVNQMLADLPRAAESLERMVK
                     RLDSVTADLPETSAQLRQTLQRMNRLIATQQQGIAATVENLQAVSNDIKELTESSRKY
                     PSQVLFGAPPPPSKVMQR"
     gene            1821..2435
                     /locus_tag="VLM90_15530"
     CDS             1821..2435
                     /locus_tag="VLM90_15530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14439.1"
                     /translation="MKSFRTLSVAAAMLALLASGCVTLERSYPEKRYYVLEVRAPAPA
                     GGMVHNEILQVSTLRISPRYQDRGFVYRISDSGFEADFYNQFIAPPAGLISEEIRKSL
                     IGAQLFKHVISASNSQAPSYVLEGAVNGIYGDFRNLNEPAAIIDLEFFLISDLPAKSG
                     ILMQKRYVKSVPVSGRSPEALVKSWDLALEEILTALTADLRAVK"
BASE COUNT          543 a          725 c          740 g          537 t
ORIGIN      
        1 cctacaacgg ccgggtgatt ctcaatcagc taagcttcga agtctaccgc ggcgaagtgt
       61 tcgtcattct cggcggctcg ggctgcggca agagcacgct gctcacacat atgatcggct
      121 tgtatgcgcc ggcggcgggc accattctca tcgacggcga caatgtcgcc acggtggaag
      181 gcctagcacg ccaacgacta ttacgaaaat tcggcgtcat gtatcagagc ggcgcgctgt
      241 tcggctcgat gacggtgttg gacaatgtct gtctgccgct gcaggagttt accgatttgc
      301 cgccggatgc gattcgcttg atcgcttcga tgaagctgca gcgcgttggt cttggcggct
      361 ttgacgatca catgccgtcg gaattgagcg gcggcatgca gaagcgcgcc gccatcgccc
      421 gcgccatggc gctcgacccg caggtgttgt ttctcgacga accgtcggcc gggctcgatc
      481 cgatcacctc ggcggaactc gacgatttga tcttgtcgct ggcgcgcagc ttgaaaataa
      541 cttttgtcat cgtcagccac gagctggcaa gcatcttcgc gattgcagac cgggtgatta
      601 tgttggataa aagtgtcaaa ggcatcgtcg ccacgggtaa accccaggag ttgcgcgacc
      661 gcagcgacaa tccctgggtg cggcagttct tttcccggca gccgtccgcg gataacccaa
      721 cgtagcgcac gcagagcact atcttagccg atcaatacac cgggtatgga aaaagccagc
      781 tacttcaaga tcggtctgtt catcatcgtc ggcacgatca tcggcgccat cggcgtggtc
      841 gccctcggcg tcggcacgat ctttcagaaa aaagtcctgg tcgaaacgta tatcgacgaa
      901 tcggttcagg gactcgacgt cggctcgtcg gtgaaattcc gcggcgtgca agtcggcaag
      961 gtcgagacca ttagcctgac cagcgccgag tacccgacca agcgccgcta cgttttggtg
     1021 cgcatcggcc tgacgacgaa aatatttcaa gcgccactgt ccgacgctgg ctcgcccagt
     1081 ttcatgaccg aggttgaaaa aggtttgcgc gtccggctgg cgtcccaggg cgtcaccggc
     1141 gcggcgtata tcgaagcgga ttatcaagac ccggcgcgca accctccctt ggaaatagat
     1201 tggcagccga tttatcccta tgtgccgtca accttgagcc ggatcaccca gctgagcgag
     1261 tcggtggaaa agattctccg cagcatggaa aacatcgatg tcggccggct ggtcgacggt
     1321 ctggaaaaat ctcttttgac gatcaccaaa gtcgcccaag gcgcgaactt cgataaactc
     1381 ggcggccagg ccgatgcgtt tttgaccgag gtgcgcgaca ccaaccgcca gttgaaagag
     1441 ttgatcggca gcagcgaaat caaatccgcc ttcaaagaca gcgcggcggc ggcgagcggc
     1501 gcgcgccaga tcatcgagcg cgcccaaggg ccggtcaatc agatgctcgc cgacttgccg
     1561 cgcgccgctg agagtttgga gcggatggtc aagcgtctcg attcggtcac cgccgatttg
     1621 ccggagacga gcgcgcagct tcggcaaacc ttacagcgca tgaaccgatt gatcgcgact
     1681 cagcaacagg ggatcgctgc cacagtcgag aacttgcaag cggtatccaa tgacatcaaa
     1741 gagctcacgg aaagttcgcg caagtatcca tcccaggtgt tgttcggcgc gccgccgccg
     1801 ccctcgaagg tgatgcaacg atgaaatcat tcaggactct ttctgtggcc gcagcaatgt
     1861 tggccttgct ggccagcggt tgcgtcaccc ttgaacgcag ctatcccgag aagcgttact
     1921 atgttttgga agtgcgcgcg ccggcgccgg ccggtgggat ggtccataat gaaattttgc
     1981 aagtgtcgac tttgcgtatt tcgccgcgct accaggatcg aggttttgtc tatcggattt
     2041 cggacagcgg tttcgaggcc gatttttaca atcagtttat cgccccgcca gccggattga
     2101 tcagcgaaga gattcgcaag agtttgatcg gcgcgcagct tttcaagcat gtcatcagcg
     2161 catcgaatag ccaggcgccg agctatgtgt tggaaggcgc cgtcaacggg atctacggcg
     2221 atttcagaaa tctcaatgag ccggctgcga tcatcgacct ggagtttttt ctgatcagcg
     2281 atctgcccgc caagtcaggc attctcatgc agaaacgcta cgtgaaatcc gtgccggtga
     2341 gcggccgatc gccggaagcg ctggtgaaaa gctgggatct ggcgctggag gaaatcctca
     2401 ctgctctcac tgcggatctt agagcggtga aataatattc gttcaagact tcaaaccctc
     2461 aagcgctgcc ttcccctgcc gagtctgggt tccgtttaag acctaaccgg aaagctccgg
     2521 taggtcgaaa atttactgcc tcttt
//
LOCUS       DATIRS010001210         1899 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1957430, whole genome shotgun sequence.
ACCESSION   DATIRS010001210 DATIRS010000000
VERSION     DATIRS010001210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1899
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1957430"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..834)
                     /locus_tag="VLM90_15535"
                     /pseudo
     CDS             complement(1..834)
                     /locus_tag="VLM90_15535"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
     gene            complement(831..1310)
                     /locus_tag="VLM90_15540"
     CDS             complement(831..1310)
                     /locus_tag="VLM90_15540"
                     /inference="COORDINATES: protein motif:HMM:NF013923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HSQ14440.1"
                     /translation="MNLQFTLNGKPWSVECEPADTLAEVLRNQLNLNGTKVSCEVQVC
                     GACTVLVDNLPVSACTYLAYEARGKNLLTVEGLEKADGTLHPIQQAFIDEFAFQCGYC
                     TPGMIMAAKALLDENPNPSREEIIHHMDGNICRCTGYVPIVAAIQRAAGMMSKESKK"
     gene            complement(1401..>1899)
                     /locus_tag="VLM90_15545"
     CDS             complement(1401..>1899)
                     /locus_tag="VLM90_15545"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HSQ14441.1"
                     /translation="KNAEVFPKPFQKPHPPVWVGGWMKLAAKRAGKYGEGWIPGWLSP
                     KEMKVGCDILNKTAEENGRDPKKITIAVEKLATIAKTREEGLNLAMPTLKTSSESYER
                     DIDSMQFALDRHIFGSVDDVRRRVDEFLENGVQHFELKIIYPTMDSLTQQMELWAENI
                     LPRYN"
BASE COUNT          365 a          538 c          550 g          446 t
ORIGIN      
        1 cgaacaagcc gccaccagcg gttcgacctt ggtgtacgac ttgctgccgt aaccgccgcc
       61 gacaaagggc acgatcagtc ggaccttgct caccggcaga ttgaaaatct acttcaaatc
      121 atggcgcacc atgaatggat gctgcgccga cgagtaaacg ttaacgccct ggtcgctaac
      181 gtcggcgatg gcgacatacg gttccatggc gtaggcgtag gtcatcggga aataataatc
      241 gccctcgatc accgtggctg cttccttgaa tgctttgtcg acatcacccc actgaatctt
      301 gtgcgtctgg cagatgttgc tgcccttgcc ggcggtgacg tcgccttcga aaccgcgcag
      361 ggcgccggcc tcgaactttc gctcgtgcaa aagcggcgcg tctttggcga gcgcctcctg
      421 cggcgtgaag acccctttga gctcatcgta cttgacgtcg atgagttcca aggcttcgaa
      481 ggcggttcgt tcgtcgacgg cgaccacggc ggcgaccggt tcgccggcgt agcgcacttt
      541 gtcgatggcg agcagcggat ggtccttgac ggcgtggccg aagtaaggat tcaagccgtc
      601 gagatcgaag ccggtgacga cgcaatagac gccgggatgg gcttcggctt tggacttatc
      661 gatggcaata attttcgcgt gggcgagcgg gctgcgcagc actttggcgt aagccatgcc
      721 gatcagccgc agatcggcga cgtattgcgc tttgccggtt actttgaccc ggccgtcgcg
      781 ccgcgggatc gaatggttga cgatttgaaa atcggtttgc ttttcaccgc tcactttttg
      841 ctctccttgg acatcatgcc ggcggcgcgc tgaatggcgg cgacgatcgg cacatagccg
      901 gtgcagcggc agatgttgcc gtccatgtga tggatgattt cctcgcgact ggggttggga
      961 ttttcatcca acaatgcctt ggccgccatg atcatgcccg gtgtgcagta gccgcactga
     1021 aacgcgaact cgtcgatgaa agcctgctgg atcggatgga gcgtgccatc ggctttttcc
     1081 agaccttcga cggtcaggag gtttttgccg cgcgcttcgt aggcgaggta ggtgcaggcg
     1141 ctcaccggca gattgtcgac cagcaccgtg caggcaccgc aaacttggac ttcgcaagac
     1201 actttggtgc cgttcaaatt caactggttg cgcagcactt cggccagcgt gtcggccggc
     1261 tcgcactcca ccgaccaggg tttgccgttc agagtaaatt gcagattcat agaaaactac
     1321 gttggagtac aggaatgttg gagttctggg tttttcctag cccaatactc catcaatcca
     1381 ttactccaac actccaatct tcagttgtac cgcggcagaa tattctccgc ccagagctcc
     1441 atctgctggg tcaagctatc catggtcgga tagatgatct tcaactcgaa atgttgcacg
     1501 ccgttctcga gaaactcatc gacgcggcgg cgcacatcgt ccaccgagcc gaaaatatgg
     1561 cggtcgaggg cgaactgcat gctatcgatg tcgcgctcat agctttcgct gctggttttt
     1621 agcgtcggca tcgccaggtt caaaccctct tcgcgggttt tggcgatggt cgccaatttt
     1681 tcgacagcaa tggtgatctt cttcggatcg cggccatttt cttcggccgt cttgttaagg
     1741 atatcgcagc cgactttcat ttctttgggc gacagccagc cgggaatcca gccctcgccg
     1801 tacttaccgg cgcgtttggc ggcgagtttc atccagccgc cgacccagac cggcggatgc
     1861 ggtttttgaa aaggcttggg aaatacctcg gcatttttg
//
LOCUS       DATIRS010001211         2958 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_779574, whole genome shotgun sequence.
ACCESSION   DATIRS010001211 DATIRS010000000
VERSION     DATIRS010001211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2958
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_779574"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(104..988)
                     /locus_tag="VLM90_15550"
     CDS             complement(104..988)
                     /locus_tag="VLM90_15550"
                     /inference="COORDINATES: protein motif:HMM:NF026954.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HSQ14442.1"
                     /translation="MDLIRSWMFVPGHRQKMIDKALGLNADAIMLDIEDGVAPNEKDS
                     ARKNIGDSLGRAKAPGSPARYVRINSIGHQWMDADLAAVVRPGLEGLVCPKVDTVDDV
                     RKVDGLLNDMEPKNQMAKGSVRLLIAIESPRGLFNAPAIAAASSRIVGIIFGTEDFGR
                     EIGLPAIREGEARDLIYARSAIVVAAAAAHVQAVDGVWVDLNDTAGLLAFAKQSRQLG
                     FSAMSCIHPGQVEAINTVFIPTAAEIDYCEKVLQAFEEANARGDGSIAFGGQLIDRPI
                     VERARRTIDMAKSLGIIQ"
     gene            1210..2406
                     /locus_tag="VLM90_15555"
     CDS             1210..2406
                     /locus_tag="VLM90_15555"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ14443.1"
                     /translation="MKLSTFKLLVPIVAVTIQSNSSSTVIPPYLDNLRIPVALIGTLI
                     SLGPVFALMARLPIGILYNRGRARWLVSAAIMAMGLTNYCYSFVTSGWSFAVVHCLNG
                     FAYSAVTTLYMAFYVDSLAPDENRNHAMGYYVGCLAVGYSTGNFLGGLIADHWGYSWT
                     FQLGALLSFVAVGLLWSLHGPSGAGAAQGKGKEATKLSVRESFKALLEPELATVVLVA
                     LFLNLLHQMGGVFISLYGLGVGMSLTQIGIIRAAYAGCNAVTRPISGHVVNKVGHKGL
                     SYFGLPLQSLILMLVPLFTGFGTILFVYVASGFMRAIVVVANAVGLVQDVPESKVRRG
                     LASGVYNAAGDMGNILGPSIGGFIAHATGIASVFVVGSLGSTALFLVSLLLMRRLRRA
                     ERVGTD"
     gene            complement(2465..>2958)
                     /locus_tag="VLM90_15560"
     CDS             complement(2465..>2958)
                     /locus_tag="VLM90_15560"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HSQ14444.1"
                     /translation="PSVLTVFNPETNVVQKNIPVGKRPHWVAVSSDGATAFTTNEESN
                     DVSIVDLTTGAITTVAVGNAPRKIAVQPVPGKRATSAPSVEIVGFAFEPATLKVALNA
                     AVTWFNRDGAPHSVQFQNGPASDTLMPGRSYALEFSLPGTYEYVCSLHPYMTGSIVVT
                     ADS"
BASE COUNT          531 a          822 c          907 g          698 t
ORIGIN      
        1 ccccggcgcg gcggcgccca tggtgaggca gcctatggcg agtagcatta atggaagctt
       61 caatttcatc gattctatcc ttattgacgt tggcgcgggc gatctattga ataattccca
      121 acgacttcgc catgtcgatg gtgcgccggg cgcgttcgac gatggggcgg tcgatgagct
      181 ggccgccaaa ggcaatcgag ccgtcgccgc gggcgttggc ttcttcgaag gcttgcagaa
      241 ccttttcgca gtagtcgatt tcggctgccg ttgggatgaa gacggtattg atggcctcga
      301 cttgcccagg atggatacag gacatggcgg agaagccgag ctggcgcgat tgcttagcaa
      361 aggcgagcaa cccggcggtg tcgttgagat cgacccatac gccgtcgacg gcctgcacgt
      421 gggctgcggc ggcggcgacg acgatggcgg agcgggcata gatcaaatcc cgtgcttcgc
      481 cctcacgtat cgccggaagg ccaatctcgc ggccgaagtc ttccgtgcca aaaataatgc
      541 cgacaatgcg cgatgaagcc gcggcgatgg ccggggcgtt gaacaggcct ctagggcttt
      601 cgatggcgat caacagccgg acgctgccct tggccatttg gttcttcggt tccatgtcgt
      661 tgagcaggcc gtcaactttt cgcacatcat cgaccgtgtc gaccttcggg cagaccaagc
      721 cttccaagcc ggggcgcacc accgccgcca gatcggcgtc catccactga tggccgatgg
      781 agttgatgcg cacgtagcgg gccggggagc cgggcgcttt ggcgcggccc aaagaatcgc
      841 cgatattctt gcgcgctgag tccttttcat tgggcgcgac gccgtcttcg atatcgagca
      901 tgatcgcgtc ggcgttcaag ccgagcgctt tgtcgatcat cttttgcctg tgtcccggca
      961 cgaacatcca tgagcggatt aaatccatga gaaagattct ccttggcggg aatttttacc
     1021 tgaaggggcg gcgaatgtct aacgactgag cctgctggat aactggtgtg caatttgaag
     1081 acgagatttc tcacttcgtt cgagatgacc gccgtcggac aatcgtcagg tgtcattctc
     1141 gacccctggg agaaattttt ccggcggtcg gttgaagccg aaaaatattt agcgaataac
     1201 tgaacggata tgaaactcag caccttcaag cttctggtgc cgatcgtcgc ggtaaccatc
     1261 cagagcaact cgtcgtcgac ggtaattccg ccctatttgg ataacctgcg tatcccggtg
     1321 gcgttgatcg gcaccttgat ttcgctcggg cccgtgttcg cgctaatggc gcgcttgccc
     1381 atcggcatcc tctacaaccg tggccgcgcc cgatggctgg tgtccgccgc gatcatggcg
     1441 atgggactga ccaattactg ttacagcttt gtcacgagtg gttggtcctt cgcggtggtc
     1501 cattgtctca acggtttcgc ctatagcgcg gtgacgactc tctacatggc gttctacgtc
     1561 gactcgctgg cgccggatga aaaccgcaac catgccatgg gctactacgt cggctgtctc
     1621 gccgtgggtt attcgacggg gaatttcctc ggcggcttga tcgccgacca ttggggctat
     1681 tcctggacct ttcagttggg cgccttgctg tccttcgtgg ccgtggggct gttgtggagt
     1741 ttgcacggac cgagcggcgc tggcgcggct cagggcaaag gcaaagaagc gacgaaactc
     1801 agcgtgcggg agtcgtttaa ggctttgctc gaacccgaat tggcgaccgt ggtcttggtc
     1861 gcgctgttct tgaacttgct gcatcagatg ggcggtgtgt tcatctcgct ctatggcttg
     1921 ggcgtgggca tgagcttgac ccaaatcggc atcattcgag ctgcctacgc cggttgcaat
     1981 gccgtgaccc ggccgatcag cggccatgtg gtgaataagg tggggcacaa aggactgtcc
     2041 tatttcggct tgccgctgca atctttgatc ttgatgctgg tgccgctgtt caccggcttt
     2101 ggcaccattc tatttgtcta tgtcgcgtcg ggattcatgc gcgccatcgt cgtcgtcgcc
     2161 aacgccgttg gcttggtcca agacgtgccg gagtcaaagg tccgtcgcgg tcttgcctcg
     2221 ggggtgtaca acgccgccgg cgacatgggt aacatcctcg gtccgtccat cggcggcttc
     2281 atcgcccatg ccacggggat agctagtgtg ttcgtcgtcg gctcattggg gtcgacggcg
     2341 ctgtttctcg tgagcttgtt gctgatgcgt cgcttgcggc gagctgaacg agtgggcaca
     2401 gactgacgac ttgatcctaa actggaccga tctaattttt tgtcaggctt gttcgactcc
     2461 ccagtcaact gtcggctgta accacgatgc ttccggtcat gtaggggtga agtgaacaca
     2521 cgtactcata ggtgccggga aggctgaatt ccagggcgta acttcggccg ggcattaacg
     2581 tgtcggaagc cggtccgttt tgaaattgaa cgctgtgcgg cgcgccgtca cgattgaacc
     2641 atgttaccgc cgcgttgagt gccactttca gggttgccgg ttcgaaggca aatcccacga
     2701 tctcgacact gggagcgctc gttgcgcgct tacccggaac tggttgtacg gcgatcttgc
     2761 gcggcgcatt tcccaccgcg accgtggtaa tcgccccggt cgtcaagtct acgatcgaaa
     2821 catcgttgga ctcttcattg gtcgtaaatg cggtagcgcc atcgctactc accgccaccc
     2881 agtgtggccg tttgccgacg ggaatgtttt tttgaacgac gttggtttcg ggattgaata
     2941 cggtgagcac gctcgggc
//
LOCUS       DATIRS010001212         2057 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_287698, whole genome shotgun sequence.
ACCESSION   DATIRS010001212 DATIRS010000000
VERSION     DATIRS010001212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2057
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_287698"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..818
                     /locus_tag="VLM90_15565"
     CDS             <1..818
                     /locus_tag="VLM90_15565"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSQ14445.1"
                     /translation="WLPKPAHAKLVQVDIDAAELHKNYPADLVVLSDIQLFLRALLSQ
                     GKEKLAVYRKGMAADVAAEIKELKNKWLASWNPRLTSDEVPMNPYRACWDLTHQLDAK
                     KTILLHDAGVTRAYVSHHYEALNPLGFIGFGGTSAMGWSTPAAMGAKLGNPDKTVVNF
                     TGDGSFGMTGMEIETAARNDIRTLTVILNNERLGASRETLHERFKGHEIGISLRGDYA
                     GVARALGAFGERISRPQELQPALQRALAHPGPAVLEIAVKPLEPRPWRSDTGV"
     gene            960..>2057
                     /locus_tag="VLM90_15570"
     CDS             960..>2057
                     /locus_tag="VLM90_15570"
                     /inference="COORDINATES: protein motif:HMM:NF013486.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HSQ14446.1"
                     /translation="MLYNRDRLLALMDRHDLVGVVAATPENIYYLSGHVSWSQNGYRY
                     GGSQVYVVYPRDPAHKPALLIPGSDVGYASIDDVRIEEKYIYGRPRNPHIADMSKLSA
                     VEQRTVKLAGSDSKGLTPEKALAQLIQDKGMGKGRIGLDHFAIPITQYEKIRANLPRA
                     KLLPASTFFRYVRMIKTADEIQRLREAAEVNEAAFESMLRACRPRVTENELASIYKGE
                     IAKAGGQVYWMHMAVTRGGNFPALKDNLLQKGDIFRVDMGCSINGYHADVCKSGCVGA
                     EPTAEHRKRYDAIQAGVLKSVEALKPGVRPQELYETRIAGVRANGLPNYSNFFLGHTI
                     GLEAREFPFLLGPAEDLDDPFLPDTTNIPVEP"
BASE COUNT          438 a          592 c          625 g          402 t
ORIGIN      
        1 gctggctgcc caagccggcc catgcgaaac tggtccaggt cgatatcgac gctgccgagc
       61 tgcacaaaaa ttatcccgcc gatctggtcg tgctctcgga cattcaactg ttcctgcgcg
      121 ccttgctatc gcagggcaaa gaaaagctcg ccgtctatcg caaaggcatg gcggcagatg
      181 tcgccgccga gattaaagaa ctgaagaaca agtggctcgc ttcctggaat ccgcggctga
      241 cttccgacga agtgccgatg aatccctatc gcgcctgttg ggatctgacc catcagctcg
      301 atgcgaaaaa aaccatcctg ttgcacgatg ccggcgtgac gcgcgcgtat gtatcgcatc
      361 attacgaagc gttgaatccg ttgggcttca tcggtttcgg cggcaccagc gccatgggct
      421 ggtcgacgcc ggccgcgatg ggcgccaagc tgggcaatcc cgataagacc gtagtgaact
      481 tcaccggcga cggctccttc ggtatgaccg gcatggagat tgagaccgcc gcgcgcaatg
      541 acatccgcac cttgacggtg atcctcaaca acgaaaggtt aggcgccagc cgcgagaccc
      601 tgcacgagcg cttcaaaggc catgagatag gcatctcgct gcgcggcgac tacgccggcg
      661 tggcgcgggc gctgggcgcc ttcggcgagc gcatttcgcg gccgcaggaa ttgcagccgg
      721 cgcttcagcg cgctttggct catcccggtc ccgcggtatt ggaaatcgcc gtgaagccgc
      781 tggagccgcg gccgtggcgg tcagacactg gagtatgaag aaatggagtg atggagtatt
      841 ggagtatcgc agaatggagt ggtggagtat tggagtaatg gagtgttggg cgggatggga
      901 tttccagtac tccatgactc cagtactcca acttggaaaa tttattagga gatttcccga
      961 tgctgtacaa tcgtgatcgt ttactcgctc tcatggaccg tcatgacctc gttggcgtgg
     1021 tagcggcgac gccggagaat atttattact tgagcggcca tgtgtcgtgg agtcagaacg
     1081 gttatcgcta tggcggctcg caagtctatg tcgtctatcc gcgcgatccg gcgcacaagc
     1141 cggcgctgct gattcccggc agcgatgtcg gttatgcttc catcgatgac gtgcgaatcg
     1201 aagagaagta tatttacggc cggccgagaa atccgcatat cgccgacatg tccaagcttt
     1261 ccgccgtcga gcagcgcacg gtgaagcttg ccggcagcga ttccaaaggg ctgacgccgg
     1321 aaaaagcgct ggcgcaattg atccaagata aaggcatggg caaagggcgc atcggcttgg
     1381 atcactttgc cattccgatc acccagtatg aaaagatccg cgccaatctg ccgcgggcaa
     1441 agctgttgcc ggcgtcgacg ttttttcgct acgtgcgcat gatcaagacc gccgatgaga
     1501 ttcagcggct cagagaggcc gccgaggtca atgaagcggc gttcgagtca atgctgcgcg
     1561 cctgccgccc gagagtgacc gagaacgagc tggcgagcat ttacaaaggc gagatcgcca
     1621 aggccggcgg gcaagtttac tggatgcaca tggcggtgac ccgcggcggc aacttcccgg
     1681 cgctcaaaga caacttgctg cagaagggcg atattttccg cgtcgacatg ggctgctcga
     1741 tcaacggcta tcatgccgac gtgtgcaagt ccggctgcgt cggcgccgag ccgacggcgg
     1801 aacaccgcaa acgctacgac gcgatccaag ccggcgtgtt gaagtcggtg gaagctctga
     1861 aaccaggggt ccgcccacaa gaactctatg agaccaggat cgccggcgtg cgcgccaacg
     1921 gcctgccgaa ttattctaat ttcttcctcg gccacaccat cggcttggaa gcgcgcgagt
     1981 ttccattcct gcttgggccg gctgaagatc tcgacgatcc gttcctgccc gacaccacca
     2041 acatcccagt cgaaccc
//
LOCUS       DATIRS010001213         1722 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1861342, whole genome shotgun sequence.
ACCESSION   DATIRS010001213 DATIRS010000000
VERSION     DATIRS010001213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1722
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1861342"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..680)
                     /locus_tag="VLM90_15575"
     CDS             complement(<1..680)
                     /locus_tag="VLM90_15575"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ14447.1"
                     /translation="MDRKWWIVILGCLTHATNTGLAYFGLSAFFPSFEKEFGWSRTAI
                     SGAFSLARVESGLFGPIEGYFVDRFGPRRMMYFGICLCAAGFVALSFVYSLPTLYVAI
                     VLGIVLGSSLGYHMPISLLIAQLFRERRSLAFGIFRSGPGLSGVMVPIIGWIIVTWGW
                     RTAAIMSAAMLALIGVPIAYAINRIAQREKAEQEISLASPHGGATMHGSADPQFTLKE
                     VLRLPAFW"
     gene            985..1248
                     /locus_tag="VLM90_15580"
     CDS             985..1248
                     /locus_tag="VLM90_15580"
                     /inference="COORDINATES: protein motif:HMM:NF027249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HSQ14448.1"
                     /translation="MKKLQYLVRINKDLQSDWGASVPDLPGCVATGKTIDAALRRIQS
                     AIALHLKGMREDGVKAPPPRHRSVTPRRTDRLVDFYATIEVAA"
     gene            1257..>1722
                     /locus_tag="VLM90_15585"
     CDS             1257..>1722
                     /locus_tag="VLM90_15585"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF013413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070573 - metallodipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane dipeptidase"
                     /protein_id="HSQ14449.1"
                     /translation="MEQRNVNSLSAVKETSTKKARAIHDRILVLDSHIDFEPADLTAE
                     RNYTQRLPTQFNLPNMIDGGLDALFFVIYVGQTRESQNPDALKAAGYQRAYHAAVEKF
                     AAVHRFASEIAPERIEIAMSAADIRRIHADGKKAALMGVENGYPLGDDLTRVE"
BASE COUNT          439 a          525 c          474 g          284 t
ORIGIN      
        1 aaccagaacg ccggcagacg tagcacttcc ttgagagtga attgcgggtc cgcagaacca
       61 tgcatcgtcg cgccaccatg cggcgacgcc agagagatct cttgctccgc cttttcgcgc
      121 tgcgcgatgc gattgatagc gtaagcgatg ggcacaccga tgagcgccaa catcgccgcg
      181 gacatgatcg ccgccgtccg ccaaccccag gtgacgataa tccagccgat gattggcacc
      241 atgacaccgg agagaccggg gccggagcga aatatgccga aagccaagct gcgccgctcg
      301 cgaaacaact gggcgatcaa gagactgatc ggcatgtggt agccgaggct cgatcccaag
      361 acgatgccga ggacgatcgc cacataaagc gtcggtaagc tgtagacgaa gctaagcgca
      421 acgaatccgg cggcgcacag gcagatgccg aaatacatca tgcgccgcgg cccgaaccga
      481 tcgacgaaat agccttcgat gggaccgaac agtcccgatt cgacgcgcgc cagcgaaaag
      541 gctcccgaga tcgccgtccg gctccaacca aattcttttt caaaggaggg gaaaaaagcg
      601 ctcagtccga agtaagctaa accggtattg gttgcatggg ttagacaacc gagaatgaca
      661 atccaccatt tgcggtccat cccaccagat gtcggaagaa accagcaact gtcaagagac
      721 tgctagcgcc aactcgcaaa gacccatact aaatgtggca agtgcttcgg tccttctggt
      781 atagtgacga agtgaaagtg cgggatgtga tcgatggatc gaatcggacg gttggcgctg
      841 cgttgtcact caaggaagtc accggcaatt caagcatgcg acaaaacctg gtcgcgtcac
      901 cgtcagcggc catcccggcg acgacatgcc gagaggaact cttgcatcag tcatccggca
      961 agccggcctc aaaggagcga aacgatgaag aagctacagt acttggttcg tatcaacaaa
     1021 gaccttcaaa gcgattgggg cgcgtcagtg cctgatcttc ctggctgcgt tgccaccggc
     1081 aaaaccatcg acgcagcact acggcgaatc caaagtgcca tcgctttgca tctcaaaggc
     1141 atgcgcgaag atggcgtcaa agcgccaccg ccacgccacc gctcagttac cccccggcgc
     1201 acggatagac tagtagattt ctacgccacc attgaggttg cggcctagag caccgcatgg
     1261 agcaacgcaa cgtcaattcg ctctccgctg tcaaagaaac ctcgacaaaa aaagctcgcg
     1321 cgatccacga tcgcatcctc gtcctcgact cccacatcga tttcgagccc gcagacctaa
     1381 ccgccgagcg caactacacg cagcgccttc cgactcaatt caacctgccc aacatgatcg
     1441 acggcgggct cgacgcgctg ttcttcgtca tttacgtcgg ccagacccgg gagagtcaga
     1501 atccggacgc gctcaaggcg gccggatacc agcgcgctta ccacgccgcg gtggaaaaat
     1561 tcgccgccgt gcaccgattc gcaagtgaga tcgcgccgga gcgaattgaa atagccatga
     1621 gcgcagcgga cattcgccgc atccacgccg atggcaaaaa agccgcgctc atgggcgtcg
     1681 agaacggcta tccgctcggc gatgatttga cccgagtgga ag
//
LOCUS       DATIRS010001214         2045 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_976063, whole genome shotgun sequence.
ACCESSION   DATIRS010001214 DATIRS010000000
VERSION     DATIRS010001214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2045
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_976063"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..558
                     /locus_tag="VLM90_15590"
     CDS             <1..558
                     /locus_tag="VLM90_15590"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSQ14450.1"
                     /translation="IMIREVNRVNQLIEQLLDLSRPTELNLEALNIHEILEDVLLLEG
                     QSEAAQKCHLKKNFDPSLPPIRGDRSRLTQVFLNLVKNAFQAMERPGSVTVTTRVETD
                     FHIRGSGNRRRRLIWVDIADQGAGIRDEDLPRIFSPFFTTKMNGTGLGLAACYQIVKE
                     HGGMIRVESSPGKGSVFKISLLVAN"
     gene            561..2006
                     /locus_tag="VLM90_15595"
     CDS             561..2006
                     /locus_tag="VLM90_15595"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSQ14451.1"
                     /translation="MDQGKILITEDEESLRFVLQKALEGEGYWVQTASNGATARRLLN
                     ENRFDVSLMDIKLPDADGLTLLKEFKDSGIDTAMILMTAQNTMRNAIGAMKNGAFDYI
                     TKPFDLDEVLVLVKRAMDSRKLTRDFRELKEEVKKRFEPGVNIIGTSSSMQGVYKIIG
                     QVVDNTATILILGESGTGKELVAKTIHYNSPRWNQPFIAINCAAIPRDLLESELFGHE
                     KGSFTGAMDRRLGKFELAEAGTLFLDEVGDIPLDLQTKLLRVLQDHEYSRVGGRDILK
                     ADVRILAATNQDLEKAVKEKRFREDLYFRLKVIPIHLPPLRERRGDISLLIGYFIEKI
                     NREMGIQISGISPEAQKLLEDHSWPGNVRELENTLIRAAVLSSGPILFPKDFTLQNKP
                     AATTLEVDQLSLEEIIRHKLEDYFRRMEGVDVDNLYSLVIERIERPLIELTLKKTKGN
                     QIKAADILGINRNTLRKKISDLGIELKKDPT"
BASE COUNT          516 a          618 c          527 g          384 t
ORIGIN      
        1 atcatgattc gcgaagttaa ccgggtgaac cagctcatcg aacagctgct cgacttatcg
       61 cggccgactg agctcaactt ggaagcgctc aacatacacg aaatcctgga agacgtgctc
      121 ttgctcgaag gtcaatccga agcggcgcaa aaatgccatc tcaagaaaaa cttcgatccg
      181 agcttgccgc ccatccgcgg cgaccggagc cgtctgactc aagtcttttt gaacctggtc
      241 aaaaacgctt ttcaagcgat ggaacggccg ggttcggtaa cggtgacaac ccgagtggag
      301 accgattttc atatccgcgg cagcggcaac cgccgcaggc ggctgatctg ggtggacatc
      361 gccgaccaag gcgccggcat ccgcgacgaa gatctgccgc gtatcttctc gccgtttttc
      421 acgactaaaa tgaacggcac cggtctcggc ttggcggctt gttatcagat cgtcaaagag
      481 catggcggca tgatacgtgt cgagagcagc ccgggcaaag gcagcgtgtt caaaatttca
      541 ctgctggtgg caaattaaaa atggatcaag gcaaaatctt aatcaccgag gacgaggaat
      601 cgttgcgttt cgtactgcaa aaagctctcg aaggcgaagg ctattgggtg cagaccgcca
      661 gcaacggcgc caccgcccgc cggctgttga acgaaaaccg attcgacgtc tcgctcatgg
      721 atattaaact gcccgacgcc gacgggctaa ccttgttgaa ggaattcaaa gacagcggca
      781 tcgacaccgc gatgatcttg atgaccgcgc aaaacaccat gcgcaacgcc atcggcgcga
      841 tgaaaaatgg cgccttcgat tacatcacca agcccttcga tctggacgaa gtgctggtct
      901 tggtcaagcg cgccatggac agccgcaagc taacccgcga cttccgtgaa ctaaaagaag
      961 aagtcaaaaa acgcttcgag cccggcgtca acataatcgg caccagctcg tccatgcagg
     1021 gcgtctacaa aatcatcggc caagtggtcg acaacaccgc gaccatcttg atcttaggcg
     1081 agagcggcac cggcaaggaa ctggtcgcga aaacgattca ttacaattcg ccgcgctgga
     1141 accaaccgtt catcgccatc aactgcgccg ccataccccg ggatctttta gagagcgagc
     1201 tgttcggcca tgagaaaggc tccttcaccg gcgccatgga ccgccgcctg ggcaagttcg
     1261 agctcgccga agccggcacg ctgttcttgg acgaagtcgg cgacattccc ctcgacctcc
     1321 agaccaaact cctgcgcgtc ctccaggatc acgagtatag ccgcgtcggc ggccgcgaca
     1381 ttctcaaagc cgatgtgcgc atcctcgccg ccaccaatca ggatctggaa aaagccgtca
     1441 aagaaaaacg cttccgcgag gatctctact tccgcctgaa agtcatcccg atccatctgc
     1501 cgccgctgcg cgagcggcgc ggcgatattt cgctcttgat cggctacttc atcgaaaaga
     1561 tcaaccgcga gatgggtatc cagatttccg gtatttcgcc cgaggcgcaa aagctgctcg
     1621 aagatcactc ctggcccggc aacgtccgcg agttggaaaa cactctgatt cgcgccgccg
     1681 tgctgtcctc cggaccgatc ctcttcccga aggacttcac gctgcagaac aagccggcgg
     1741 cgacgacatt ggaagtcgac caactttccc tcgaagaaat cattcgacat aaactggaag
     1801 actactttcg gcgcatggaa ggcgtcgatg tcgacaatct ttattcgttg gtgatcgaac
     1861 gaatcgaacg gccgctgatc gaactcacgc tcaaaaaaac caaaggcaat caaatcaaag
     1921 ccgcggatat cctcggcatc aaccgcaata ccctgcgcaa aaagatctcc gacctgggca
     1981 tcgagctgaa gaaggatccg acctagttca atggcgctca cgctcccacc gctctacgcc
     2041 atcct
//
LOCUS       DATIRS010001215         2242 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1468475, whole genome shotgun sequence.
ACCESSION   DATIRS010001215 DATIRS010000000
VERSION     DATIRS010001215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2242
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1468475"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..739
                     /locus_tag="VLM90_15600"
     CDS             <1..739
                     /locus_tag="VLM90_15600"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF044283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ14452.1"
                     /translation="VPVVRGAVTGLPIPANAEIVLEGNILPIKDEEMPKEGPFGEWPG
                     YFTEANVGETPLMEVKRVYYRNDPILLGAPPLKPPSSYLPIPLGAATLWEQLEKAGIP
                     EVKGVWGFVYGGQPGPFTVVSIKQRYAGHAKQALLVAAGARAGAYGGKFVVVVDDDID
                     ITNPAEVIWAIATRCHVREDLDIVKGVWASVCEPALPPEERSPRGYTTDRVLIDACRL
                     FKWMDQFPAVNAFTKEYKNKIATKYKI"
     gene            869..1480
                     /locus_tag="VLM90_15605"
     CDS             869..1480
                     /locus_tag="VLM90_15605"
                     /inference="COORDINATES: protein motif:HMM:NF024937.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4126 domain-containing protein"
                     /protein_id="HSQ14453.1"
                     /translation="MGTAWTSGINLYATVGALGIAGQLKLIQLPQTLEVLTHPAVIAI
                     ACIMYLIEFFADKVPYVDSGWDLLHTFIRVPAGAILAARSLGDMNPALELAALLAGGS
                     IALVAHGAKATTRLAINASPEPFSNWAASITEDITVLGSIWMIFNHPIIMMVLIVIFL
                     MSIIWLMPKVFRAAKRGFQALRNKMRGVKPDQTTPSGSSPQPT"
     gene            1523..>2242
                     /gene="hemQ"
                     /locus_tag="VLM90_15610"
     CDS             1523..>2242
                     /gene="hemQ"
                     /locus_tag="VLM90_15610"
                     /EC_number="1.3.98.5"
                     /inference="COORDINATES: protein motif:HMM:NF008913.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006785 - heme B biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogen peroxide-dependent heme synthase"
                     /protein_id="HSQ14454.1"
                     /translation="MEHHSTQAQNPDLPATPLTLDGSYILHQMFRVRWTAWRGVGSSE
                     RKHVLSDAIATFTAMEQNKQEPTGLFSMLGHKGDLMLVHFRKSLDELNHAELTVARSE
                     LNEYLEPASSYLSVVELGLYEASVKLYAESTAKGLKPGTADWNREVEAELARQREAAA
                     PRLWPEIPQRRYLCFYPMNKYRGETKNWYSEPIRERQRMMREHGMIGRHYAGRVTQII
                     SGSIGFDDWEWGVDLFADDPLV"
BASE COUNT          477 a          658 c          656 g          451 t
ORIGIN      
        1 ggtgccggtg gtgcgaggcg cggtgaccgg tctgccgatt cccgccaacg cggagatcgt
       61 gctcgaaggc aacattctgc cgataaaaga tgaagagatg cctaaagagg gtcccttcgg
      121 cgaatggccg ggttacttta ccgaagccaa cgtcggcgag accccgttga tggaagtaaa
      181 gcgcgtctac tatcgcaacg atccgatctt gcttggcgcg ccaccgctca aaccgccgtc
      241 aagttatctg ccgattcccc tcggcgccgc cacgctttgg gagcagttgg agaaagccgg
      301 catccccgaa gtcaaaggcg tttggggctt cgtttacggt ggccagccgg gtccgtttac
      361 cgtggtctcg atcaagcagc gttacgcggg ccatgcgaaa caagccctgc tcgtcgcggc
      421 gggcgcgcgc gccggggcct acggcggaaa gttcgtcgtt gtcgtcgatg acgacatcga
      481 catcaccaat ccggcggaag tcatctgggc gatcgccact cgctgtcatg tgcgcgagga
      541 cctcgatatc gtcaaaggcg tgtgggcgtc cgtttgcgag ccggcgttgc cgccggaaga
      601 gcgctcgccg cgcggctaca ccacagatcg cgtgttgatc gacgcctgcc ggctgttcaa
      661 gtggatggat caattcccgg cggtaaacgc atttaccaag gaatacaaga acaagatcgc
      721 cactaagtac aagatttagt acgagtatta gatagtgtcg ccgaagatta agataacccg
      781 cgcccagacg tcaaagtagt aatattttgg ccgccgcacg gtcggaacgg gggatccaat
      841 gggcacgatc gaagcattaa gcctagcgat gggcacggcc tggacgtcgg ggatcaatct
      901 ttacgcgacc gtcggcgcac tgggtatcgc gggacagtta aagctcattc agctgccgca
      961 gactctggaa gtgctcactc atcccgccgt cattgccatc gcctgcatca tgtatttgat
     1021 tgaattcttc gccgacaaag tcccctacgt cgacagcggc tgggacttgc tgcacacttt
     1081 catccgcgtg ccggctggtg cgatcctcgc cgcccgatcc ctgggcgaca tgaacccggc
     1141 gttggaactc gccgcgctgc tcgccggcgg atccatcgcg ctggtggcgc acggcgctaa
     1201 agcgacaacg cgattggcaa tcaacgcgag ccccgagcct tttagtaatt gggccgcgag
     1261 catcaccgaa gacattaccg tgttgggtag tatttggatg atcttcaatc atccgatcat
     1321 catgatggtg ctgattgtta tcttcctgat gtccatcata tggctgatgc cgaaggtttt
     1381 tcgcgccgcc aaacgcggct ttcaagcgtt gcgtaacaag atgcgcggcg tcaaaccgga
     1441 tcagacgacg ccttcgggct cctcgccgca accgacctaa ccttcgaagg attcgccccg
     1501 gcacagaaag aattcgaaat tcatggagca ccattcgact caagcgcaaa atcccgatct
     1561 gcccgcgaca ccgctcacgc tggatggttc gtacatcttg catcagatgt ttcgcgtgcg
     1621 ctggaccgcg tggcgcggcg tcggcagctc ggaaagaaag catgtgctga gcgacgcgat
     1681 cgcgactttc accgccatgg aacagaacaa gcaagaacct acgggtctgt tctctatgct
     1741 cggacacaaa ggcgacttga tgctcgtcca ttttcgcaaa tccttggacg agctcaatca
     1801 tgccgagttg accgtcgccc gctcggagct gaacgaatat ctcgaaccgg caagttcata
     1861 cctatcggtg gtcgagctgg gcctctatga ggcttcggta aaactctacg ccgagtcgac
     1921 cgccaaggga ctcaaacccg gcaccgctga ttggaacaga gaagtggaag cggaattggc
     1981 gcgccagcgc gaggccgcgg cgccgcgcct ttggccggaa attccccagc gccgctattt
     2041 gtgtttttat ccgatgaaca aatatcgcgg cgagactaag aactggtaca gcgaaccgat
     2101 ccgcgagcgc cagcgaatga tgcgcgagca cggcatgatc ggccgccact acgccgggcg
     2161 cgtcacgcag atcatttccg gctccattgg cttcgacgac tgggaatggg gcgtggatct
     2221 ttttgccgac gatccgctcg tg
//
LOCUS       DATIRS010001216         1592 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_779957, whole genome shotgun sequence.
ACCESSION   DATIRS010001216 DATIRS010000000
VERSION     DATIRS010001216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1592)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1592)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1592
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_779957"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..205
                     /locus_tag="VLM90_15615"
     CDS             <1..205
                     /locus_tag="VLM90_15615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14455.1"
                     /translation="NIADVPKLTTVLMETPAGPIPYQGKAIAEIPNVPTAAAIANAIQ
                     DACGVRILDLPITAEKVYGMLKK"
     gene            594..1397
                     /locus_tag="VLM90_15620"
                     /pseudo
     CDS             594..1397
                     /locus_tag="VLM90_15620"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
BASE COUNT          384 a          410 c          506 g          292 t
ORIGIN      
        1 caatatcgcc gacgtgccaa aactgacgac ggtgctgatg gaaactccag cgggaccgat
       61 tccctatcaa ggcaaagcca tagcggaaat tcccaacgtg ccgaccgccg ccgccatcgc
      121 caatgcgatc caagacgcct gcggcgtgcg catcttggat ttaccgataa cggcggaaaa
      181 ggtttatggg atgctgaaga aataagaacg gaaacggaga attaaccgca aagggcgcag
      241 cgcggcacag ccgcaaccga aactcggaac gtctcgcgca aagcacgcaa agggcgcgaa
      301 ggaaaaaaaa gaatagattt ccagctttgc gacctttgcg gccttggcgc gaggaatgtc
      361 cgaatccgag acgctctagt ctgcgaaaat ttgcgcacgc cgcgcaggtg ttcacagata
      421 gcaatgcaaa gggcgcaaaa agcaatctga attgtcgggg caaccccctg tggttgcccg
      481 tccgaagggc aggcacgggg ggcctgcccc taaaacatag ggacgcaaac atactaagtg
      541 caacgcgatc gattcgtcgg tcgaattgag caaaactgaa aggtaggaac aagatggctt
      601 ttgaaacgat tttattcgaa gtgcgcaatc aaatcgcttg ggtgacgttt aaccggcccg
      661 agtcgatgaa cgcggtcaac cggcaaatgg cgcgtgagct ggtcgagtcg tgcaaacaga
      721 tcgaagacga cacggcgatt cgcctggcga tttttacggg cgcgggggag cgggcgtttt
      781 cggctggcat ggacttgaaa gagcgcgccg agagcgcggt ctcgccgatt gaacggcgcg
      841 ccgcgaagct gtctgggata accatcaact cgcaaagccg cgcggtggcc gcgctgacca
      901 agccgaccat ctcggcgatc cgcggctact gcgtcggcgg cggtctcgaa ttcgcgctcg
      961 cctgcgacat gcgcatcgct gcggaagacg ccaagttggg cctggctgaa gtgaagcgcg
     1021 ggattattcc tggcgccggt tagacagatt tccagcggtt ggcgcgcacc gtcggcgtgg
     1081 ccacggcgct ggaaatctgt ctaaccggcg acaacgttag cggcgcggaa gcggagaaac
     1141 taggactggt caaccatgcg gtgccggcgg ccgacgtcat gaaagcggcg gaagatttgg
     1201 ccggtcgcat cctcaaaggc gcgccgatgt cggtgatgtt catcaaagaa gcgatcacca
     1261 aaggcgtgca gttgtccatc gacgaaggtt ttcgcttgga gtcggatctg tcagccttgg
     1321 tgggaacgac ggaagacagc aaagaagggc cgcgggcgtt cgccgagaag cgcgcgccgg
     1381 tgtggaaggg gaaatgagga attttggatt ttcgtccgcg gggctgcttt tggattttgg
     1441 attggggatt gaggaaaccg gcagatgcat aaaacagttc aaacttttta tcttagctct
     1501 cgctccggta atcgaaaatc taaaagcggc cccgcggacc aaaagcggcc ccgcggacta
     1561 aaatgggtgg ggtttcttgt tgtcttgctt gt
//
LOCUS       DATIRS010001217         2504 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_582738, whole genome shotgun sequence.
ACCESSION   DATIRS010001217 DATIRS010000000
VERSION     DATIRS010001217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2504
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_582738"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..241)
                     /locus_tag="VLM90_15625"
     CDS             complement(<1..241)
                     /locus_tag="VLM90_15625"
                     /inference="COORDINATES: protein motif:HMM:TIGR01409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HSQ14456.1"
                     /translation="MAKITRRRFLQVSGMSVAALGAGQVPVFGQARRRVLVIGGGWGG
                     ATAAKYLRLTDPSIDVTLLEPNKEFISCPFSNLVLA"
     gene            452..919
                     /locus_tag="VLM90_15630"
     CDS             452..919
                     /locus_tag="VLM90_15630"
                     /inference="COORDINATES: protein motif:HMM:NF024892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate oxidation carrier protein SoxY"
                     /protein_id="HSQ14457.1"
                     /translation="MLGGAGVLKDFLLPSKVKAQATALGMPQPDELIEATLKRIFANR
                     TFQRGDDKIKVDLPQIAEDGGSVAITIDSALPVSGAVFVHHFYIISDKNRRPMLAKFS
                     FTPESGRAFVATSVRLATSTDMRVVAEMNDGTLYALSKHVRVTISGCDLPPQG"
     gene            996..1328
                     /gene="soxZ"
                     /locus_tag="VLM90_15635"
     CDS             996..1328
                     /gene="soxZ"
                     /locus_tag="VLM90_15635"
                     /inference="COORDINATES: protein motif:HMM:NF020350.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate oxidation carrier complex protein
                     SoxZ"
                     /protein_id="HSQ14458.1"
                     /translation="MAEVGRVSIRLPTSIKQGDVIRVRTLVIHPMEIVQRDKANKIIP
                     KNYLFIHTMAVAYNGKEVMRTELTQGVSQNPSFIFTLKVDKPGKLTVSFSDTTGKVYQ
                     GQSDVQFS"
     gene            1420..>2504
                     /locus_tag="VLM90_15640"
     CDS             1420..>2504
                     /locus_tag="VLM90_15640"
                     /inference="COORDINATES: protein motif:HMM:NF016064.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE thiosulfate transporter family
                     protein"
                     /protein_id="HSQ14459.1"
                     /translation="MPIARAPAVMTGQPANFAAFLRDQHNHIFGRPWPVIPSALVIAA
                     LNVFLFAYDKPWTASDGLRNWGDSLFHWLGFIDQPDLLPPLLYSGSVLNIGLLLGGLV
                     AALLSREFAVRPAPGAELVKGALGGLLMGAGAMLSFGCNIGGFFSALAALSASGLAMM
                     AGLILGAFLGTRYLIRENGKVIKSGRLPFMSTCEAPPRPAGGSAAFKLQPGYGVFVFA
                     LVLGSGCLYQFLGHGRLAVFLYFGVVFGIVFQRSRFCLVNAFREPFLSGASEHARAAA
                     LALVMSLSGFAILKVTDLKDATEWVFPSFWFGALTGGILFGTGMVLAGGCGAGSIWRV
                     GEGHVKLWIAVAFFAFGTSAMRLLLTRT"
BASE COUNT          462 a          655 c          768 g          619 t
ORIGIN      
        1 cggccaatac tagattgctg aacggacagg aaatgaattc cttgttgggc tcgagcaagg
       61 tcacgtcgat ggagggatcg gtgaggcgaa ggtacttcgc cgccgtggcg ccgccccagc
      121 cgccgccgat gacgaggacg cggcgccgcg cctggccgaa caccggcact tgcccggcgc
      181 ccagtgccgc gacgctcatg ccgctgactt ggagaaacct tctgcgagtg attttagcca
      241 tggatatctc cataaagttg attgctttca ttgagtattt gcgtcaataa ccaaacgtcc
      301 aggctaagtc aaggagaaac taagctagtt gattggcgta gtcatattta ctaaattgca
      361 gtcgatgcgc atattaataa ggagtcgatt caagtcagag gctgagcctt tgacgctgag
      421 tcgcagaagg tttctagggg ttctggtaac catgcttggt ggcgctggtg tgctcaagga
      481 ctttttgctc ccaagcaaag taaaggcaca ggctactgct ttgggcatgc cgcagccgga
      541 cgagctaata gaagcgacct tgaagcggat tttcgccaat cgcactttcc agcgcggtga
      601 cgacaagatc aaagtcgacc tgccgcagat cgccgaggat ggcggcagtg tggctatcac
      661 catcgattcg gccttgccgg tgagcggcgc ggtgttcgta catcacttct acataatttc
      721 cgacaagaat cgccggccga tgttggcgaa gttttctttc acgccggagt cgggtcgggc
      781 atttgtcgct accagcgtgc gcttggcgac ttccaccgat atgcgcgtgg tggcggagat
      841 gaacgatggg acgctttatg cgctgagcaa gcatgtgcgg gtgaccatca gcggctgtga
      901 tttgccgcct cagggctgag ccgctgcgca gcgttccaat cgttccagag gttcaaaacg
      961 ttcaagtcgt tttcggaaaa tggttgagaa aagttatggc tgaagtcggt agagtcagta
     1021 ttcgcttgcc aacgtcgatc aagcagggcg acgtgattcg cgtgcgtacg ttggtgatcc
     1081 atccgatgga gatcgtccag cgcgataagg cgaacaagat tattcccaag aactatctat
     1141 tcatccacac catggcggtg gcctataacg gcaaggaagt gatgcgcacg gaactgaccc
     1201 agggtgtgag tcaaaatccg agttttatct ttacgttgaa agtcgacaag ccggggaagc
     1261 tgacggtgag tttttcggac actaccggca aagtttatca agggcagagc gacgtgcagt
     1321 tttcctagtt catggttaca agcgtcgcgc atggatgatt gacatggcgg atggtttttt
     1381 tcgatcttcg aaccgcgatc ttctatcctc ggcggttctt tgccaatcgc gcgcgctccc
     1441 gccgtcatga ccggccaacc tgccaacttc gccgcgttcc tgcgcgatca acataatcat
     1501 atctttggcc gcccctggcc ggtgatcccg tcggcgctgg tgatcgccgc gctcaatgtt
     1561 tttctctttg cctacgacaa accttggacc gcgtcggatg gcttgcgcaa ctggggcgat
     1621 tccttgttcc actggctcgg ttttatcgat cagcctgact tgctgccgcc gctgctatat
     1681 tccggctctg tgctgaatat cggtttgctg ctcggcggac tggtggcggc gctgctgagc
     1741 cgtgagttcg ctgtgcgccc cgcaccgggc gcggaattag tcaaaggcgc gctcggcggt
     1801 ttgctcatgg gcgcgggtgc gatgttgtcg tttggctgca acatcggcgg atttttcagc
     1861 gcgctggcgg cgctatcggc gagcggtctg gcgatgatgg cggggttaat cctcggtgcc
     1921 ttcctcggca cgcgctatct gatccgcgag aacggcaaag tcatcaaatc tggcaggttg
     1981 ccattcatgt caacttgcga agcgccgccg cggccggcgg gtggctcggc cgccttcaag
     2041 cttcagccgg ggtacggcgt gttcgtgttc gcgctcgtgc tcggaagcgg ctgtctttat
     2101 caattcttgg gtcatggcag attggcggta ttcctttatt tcggtgttgt ttttggaatt
     2161 gtctttcaac gctcgcgctt ttgtctggtc aatgccttcc gtgagccgtt cttgagcggc
     2221 gcgagcgagc atgcgcgggc ggcggcattg gcgctggtga tgagtctgag cggctttgcg
     2281 attctaaaag tcacggattt gaaagacgcc acggagtggg tgttcccgtc tttttggttt
     2341 ggcgctttga ccggcggcat tctcttcggc accggcatgg tgctcgccgg cggctgcggc
     2401 gcgggatcga tctggcgcgt cggcgaaggg catgtgaagc tttggatcgc cgtggctttt
     2461 tttgcctttg gcacatcagc gatgcgtctg ttgctcacgc gcac
//
LOCUS       DATIRS010001218         2713 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1075623, whole genome shotgun sequence.
ACCESSION   DATIRS010001218 DATIRS010000000
VERSION     DATIRS010001218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2713
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1075623"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            429..2240
                     /locus_tag="VLM90_15645"
                     /pseudo
     CDS             429..2240
                     /locus_tag="VLM90_15645"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
     gene            2237..>2713
                     /locus_tag="VLM90_15650"
     CDS             2237..>2713
                     /locus_tag="VLM90_15650"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HSQ14460.1"
                     /translation="MIGAQLPDEEILGKAYDARLMARILRYLRPYWKLLAVAFVFLLL
                     QTGTQLLGPYITKIAIDRYVAAGDIPGLDLMTLAYLGVVVCGFVVLFIQTYTTEYIGQ
                     RAMHDLRLEIFSHLQKQDLAYFDRNAVGRLMTRTINDVETLNELFSTGVVGLLGDVS"
BASE COUNT          530 a          765 c          795 g          623 t
ORIGIN      
        1 aaactcatgg acggcgcgtg ggcggagatt catagccagc atgcggtgac acgagactag
       61 accctagtgc ggaagagctg cactaaattg ggtgaaaaac attcaccacg aaggtcctag
      121 cgcggcaagc cgcaaccgaa actcggaata tctctcgcca agacgcaaag gccgcaaagg
      181 tcggaaaata acggtgaata gattcttcaa gataattcat cactttcctc cgaacttcgc
      241 gagctttgcg cctttgcgag agtcaatccc acgttctagt attcccggca ccggaaaatt
      301 tgcgcagacg gagacaacta ttcagcatag gagtacgaag atcacgaagg tcggagttta
      361 aattgtccga attctctgaa cccttcgtgt ccttcgtgcc ttcgtggtga gatcaaaatt
      421 tttcatcgtt ggcgcatacc gaccgcgaac caaaggatag agagattctt cgctactacc
      481 accgggtcaa gtttctcatt gaccgctacc gccggctgct cctgctcggc gttgtatccc
      541 tgatcgccac cgatctcgcc ggcatcgcct tgccgtggtt gatcaagggc ggcatcgaca
      601 cggcgctgcg cgccaaagat ggcaacgtgt cgctgctgag ttacccgctg ctgatacttg
      661 gcgcggcgtc gctgcaaggg tttttccgct actgttggcg catcaatatt catggcttct
      721 cgcgccgctg cgaggccgat ttgcgcgatg tggtgtttgc ccatctgcag aagctgccgc
      781 tcagttattt tcagtacaac aagatcggcg acctgatgtc gcgcctgacc aacgacatcc
      841 atgcggtgcg cgagctcatg ggattcggct cgctggcgat cgtcgatgcg ctggtggtga
      901 ttcttttcag tttgacgctg atggtcgcta tcgatccttg gttggccttg tggtcgatga
      961 tggcgatgcc gttcattccg atcgtcgtgc gcttcttcgg ccggcatatt ttccgctggt
     1021 cgcgcgcgac ccaggatcaa ctgagcgaga tgagcgccta tacgctggag aacttttccg
     1081 gcatccgggt cgttcaagct tacgctcagg aagaaaatca aatccgcggc tttgatcgca
     1141 tcagctccga gtaccggaag aagaccatgt ggctggcgac gctgtggggg atattctggc
     1201 cgctcatgca ggtccacgcc ggcatcgccg caaccatcgt gctctggctc ggcgggcgcc
     1261 aagtattggc gggaaccatg agcctgggcg aatacgtcgc tttcaacggc tatctggcga
     1321 tgcttacctg gccgctcatg gcgatcggct ataccgccaa tcaatatcag cgcggcacag
     1381 cggcgttgac gcgcattgcc gaagttctgg atacgccggt cggagcgcgc tatgccagtc
     1441 ctgctagttt ggcgacgtca caggccgtgc gtggcgatat tgagttgcgc aatttgactt
     1501 tctcctacgg cgccggccaa gcgccggagc tgcgcaatat taatttgcat gttgccgccg
     1561 gcaaggtctg cggcatcatc ggcgagaccg gatcgggcaa gagcacgctg gtcaatctta
     1621 tgctgcggct ttatgagccg gcggagaatt cgattctcat cgatggtgtc gatattcgcc
     1681 ggatgccgtt acgccagctg gaggacgccg tcggctacgt ctcgcaggat atttttcttt
     1741 tctagggatc ggtgcgagaa aatattttac tgggcgtcga gaatggcgcg ttggcgcgcg
     1801 tcgaagaggc gtcgcgcatc gcccaattgc tgccggccat cgagtctttt ggcgccggct
     1861 tcgacaccat tatcggcgag cgcggcgtgc gcctgtcggg cggacagaag cagcgcaccg
     1921 cgctggcgcg ggcgttgata aaaaatccgc cgattctgat tcttgacgac gctttttcca
     1981 gcgtcgatgt cgagaccgaa gaagagattc tgcgcgagct caaacagttc atgcgcggcc
     2041 ggaccacact tttgatttcc caccggatct cgaccgtgcg agacgccgac atcatcatct
     2101 acctgcgcgg cggtgagatc atcgagcagg gtactcatga cgaactcctg gcgcagcgcg
     2161 gcgcttattt cagcttgtac cggcgccaga gcttggaacg ggaagtcgcc agcttgatgc
     2221 ttgaggatgg gcagcgatga tcggcgcgca gcttcccgat gaggagattc tcggcaaggc
     2281 ctacgacgcg cgcttgatgg cgcgcatcct gcgctacctg cggccctatt ggaagctgct
     2341 cgcggtggcg tttgtctttt tgttgctgca gaccggcacg cagctactcg gtccctatat
     2401 caccaagatt gccatcgacc ggtatgtcgc cgccggagat attcccggcc tcgacttgat
     2461 gacgttggcc tatctcgggg tcgtcgtgtg cggctttgtc gtgttgttta tccagaccta
     2521 caccaccgag tatatcggtc agcgcgcgat gcatgatctg cgtctggaga tcttcagcca
     2581 tttacaaaag caggacctgg cctatttcga tcgcaacgcc gtcggccggc tgatgacccg
     2641 gacgatcaac gatgtcgaga cgctgaacga actattcagc accggcgtcg tcggtcttct
     2701 cggcgatgtc tcg
//
LOCUS       DATIRS010001219         2008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1174147, whole genome shotgun sequence.
ACCESSION   DATIRS010001219 DATIRS010000000
VERSION     DATIRS010001219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2008
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1174147"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(37..1107)
                     /locus_tag="VLM90_15655"
     CDS             complement(37..1107)
                     /locus_tag="VLM90_15655"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HSQ14461.1"
                     /translation="MADTAQPINLFEFEDAAKELLPKAEYDYIAGGATDEISVDRNRR
                     AYASWAFRPRVLRDVSKLDLSTTVLGCKVSLPVLIAPCGGHKRAHPDGELATYRAAAS
                     CGTAMAVSANANTSFEDLANAANGMLWVQLYPFRDKAMTQDWLDRAKANGYKAIIVTL
                     DSQWPPKRERNIRNRYQRSRGANYPTSGEPADAPRPAGSGAGSDPAATWKDLQWIKAA
                     TSLPVVAKGIMTGEDVELCADAGADGVIVSNHGGRHLDNTLATVEVLSEAVAAAKGKI
                     EVFLDGGIRRGADVVKAIALGARAVFIGRPLFWGLAVGGEQGVVRVLNLLREEIEITM
                     AKCGRPTIASIDGSTIVKVPSL"
     gene            complement(1142..1393)
                     /locus_tag="VLM90_15660"
     CDS             complement(1142..1393)
                     /locus_tag="VLM90_15660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14462.1"
                     /translation="MAEESIEAKLARLEAENQALKQQVERKPGELRLKVSEKGGLSIY
                     GLGRFPVTLYKEQWTRLLDYADEIREFLKANDQQLKAKQ"
     gene            1581..>2008
                     /locus_tag="VLM90_15665"
     CDS             1581..>2008
                     /locus_tag="VLM90_15665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ14463.1"
                     /translation="MSANLGTRIIDGDGHIMEDNAGIIAHMEGAYREIAARKGTCFPP
                     LDHLHSGRAVETPPQRDGRAPVGPEGWLDFLDDIGIDWTVMYPTVALSYGKIVSRDYA
                     VAVCKAYNDWMSDTYLKFNSRFKGMAIIPMQDPEEAAKELR"
BASE COUNT          417 a          610 c          553 g          428 t
ORIGIN      
        1 tagcagtggt tggaaatgac aactattgga acggttttac agcgacggaa ctttgacgat
       61 ggtggagccg tcgatgctag cgatggtcgg ccgtccacac ttcgccatgg tgatctcgat
      121 ttcttcacgg agcaaattaa gcacgcgcac aaccccctgc tcgccgccga ccgcgagtcc
      181 ccagaacagc ggccggccga tgaacaccgc cctggcgccc aaagcgatcg ccttgacgac
      241 atcggcaccg cgccgaatgc caccgtcaag aaatacttcg atctttccct tagccgcggc
      301 caccgcttcg ctgagaacct ccaccgtcgc caaagtatta tcgagatggc ggccgccatg
      361 attggaaacg atcacgccgt cggcgccggc gtcggcgcag agttcgacat cttcgccggt
      421 catgattccc ttggccacca ccggcaaact ggtcgccgct ttgatccact gcagatcttt
      481 ccaggtcgcc gccgggtctg agcccgcgcc gctacccgcc gggcgcggcg catcggcagg
      541 ttcgccgcta gtgggatagt tggcgccacg gctgcgttga taacggttgc gaatattgcg
      601 ttcgcgtttg ggcggccact gcgaatcgag agtcacgata atcgccttgt agccgttggc
      661 cttggcgcgg tcgagccaat cttgggtcat ggctttgtca cggaacggat agagctgcac
      721 ccacaacatg ccgttggccg cattggcgag atcttcgaag gaggtattag cattggcgct
      781 caccgccatc gccgtgccgc aggatgccgc ggcgcggtag gtggcgagct cgccgtcagg
      841 atgcgcccgc ttgtgaccgc cgcagggtgc gatcaatacc ggcaacgaga ctttgcagcc
      901 cagcaccgtg gtcgacaagt caagcttact gacatcgcgc aagacgcgcg ggcgaaacgc
      961 ccacgaggca taggccctcc ggtttcggtc gacgctaatc tcatcggtgg cgccgccggc
     1021 gatgtagtcg tactccgctt tcggcagcag ctccttagct gcatcttcga actcaaaaag
     1081 attgatcggt tgcgcggtgt ctgccatgaa aactcctgat cgctcgatcg agcgatattt
     1141 gttactgctt cgccttcaac tgctggtcgt tagccttgag aaactcgcga atctcatcgg
     1201 cgtagtcgag caacctcgtc cactgctctt tgtagagcgt cacgggaaat cgtcccaacc
     1261 cgtaaatcga cagcccgccc ttttcgctga ccttcaagcg cagttctccg ggcttgcgct
     1321 cgacctgttg tttcaatgcc tgattctccg cttcgagccg cgccagtttc gcttcgatgg
     1381 attcttccgc catatgtcct ccatatgcat ttcgtctgcc aataacgtcc tgcgaccctt
     1441 ttatcgcaaa gctggcgaca acgcgagggc gaggaaacaa ccggcttgaa cccggtcctc
     1501 aagtcggatt ataagaagtg acaatgcatg actgacaacg atctatttaa atttcaaaac
     1561 tttttaggag gatctttagg atgagcgcaa atcttggcac gcgaattatc gacggcgacg
     1621 gccatatcat ggaagacaac gcgggtatca tcgcccatat ggagggggcc taccgggaaa
     1681 tcgccgcacg caaaggcacc tgttttccgc ccttggacca tcttcattcc gggcgcgccg
     1741 tcgaaacccc gccgcaacgc gacggacgcg cgccggttgg accagaaggc tggctggatt
     1801 ttcttgacga catcggcatc gactggaccg tcatgtatcc gaccgtcgca ctatcctacg
     1861 gcaaaatcgt cagtcgcgac tacgccgtag cggtctgcaa agcttacaat gattggatgt
     1921 cagacactta cctaaagttt aattcgcgct tcaaaggcat ggcgattatt cccatgcagg
     1981 atccagaaga ggccgccaag gaactgcg
//
LOCUS       DATIRS010001220         2244 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1075732, whole genome shotgun sequence.
ACCESSION   DATIRS010001220 DATIRS010000000
VERSION     DATIRS010001220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2244)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2244)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2244
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1075732"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..554)
                     /locus_tag="VLM90_15670"
     CDS             complement(<1..554)
                     /locus_tag="VLM90_15670"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HSQ14464.1"
                     /translation="MTFSAISGHDYRVAPEKLNLAQNVLDDTIARGCGARTALVGEFG
                     VVTYESLQQRVDSVAAGLLDLGLQRGDLVLIKMSNSPEFAVAFLAAVKLGVIPVLVNS
                     LLTAVELTAVLEQTRPPLIFTEVSRSDAVRELHGSALFKHVVYAGEAEGSEIPFAELE
                     SKSSAAIVSADTRSDEPAFIVYTSG"
     gene            complement(560..1474)
                     /locus_tag="VLM90_15675"
     CDS             complement(560..1474)
                     /locus_tag="VLM90_15675"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HSQ14465.1"
                     /translation="MDYKEIKGSVHDNPNTPGEPCIGVIALNRPEKLNAVDPLMRLEL
                     DALCSEIARNSIVKVVILTGEGRGFCAGGDLKSEGDVLGAFEGSMGITGPYKEMAEYF
                     FNDLRHRVLQSAMRKLEDLPQVTIAAINGPAVGVGLEMATLCDMRIASDRARFGEVAV
                     PAGFVPESGGARNLPKLIGVGRAMRLILTGEIIDAKEALRIGLVEEVVPAAKLLDTAF
                     ALAGRIAANPYLSVRQAKRLVKMYWNWNRTDEGYQQELDAVLEITRTKDCQEGMRAFV
                     EKRPPRYTYPYDADWPFQKKGPAKKPKK"
     gene            complement(1641..>2244)
                     /locus_tag="VLM90_15680"
     CDS             complement(1641..>2244)
                     /locus_tag="VLM90_15680"
                     /inference="COORDINATES: protein motif:HMM:NF044283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14466.1"
                     /translation="IHSVTRVMLHEPLTATQKLTVIQMRQPSKAEVWRALMAAVTFRP
                     SMSKIVIAVDDDIDPENLDAVFWALGYRSQPHRDVQIIRGTDVGHAPRHDARGGADDS
                     CLLWDATLKETFPPISLPKKEYMERARKLWERLELPKLEPESPWFGYSLGDWNPELDE
                     EAKLAVAGEFWQTGEKIARQRKRTDEVAVNTSYYGQQKKK"
BASE COUNT          442 a          680 c          658 g          464 t
ORIGIN      
        1 ccagaggtgt aaacgatgaa agcgggctcg tcgctccgcg tatcggctga aacaatggct
       61 gcggaagact tcgactccaa ctctgcgaat ggaatttcac tcccctccgc ttcaccggcg
      121 taaacgacat gcttgaacaa agcgctgccg tgcagttcgc gcacggcgtc actgcgcgat
      181 acttcagtga agatcaatgg cggtctggtt tgctcgagca cggcggtcag ctcgactgcg
      241 gtaagtagag aattgaccag aacgggaatc acgccgagct tgaccgctgc gagaaacgcg
      301 acggcaaact ccggcgagtt gctcatcttg atcagaacca gatcgccgcg ctgcaatccc
      361 aggtcgagca agccggcggc cactgaatcg acccgctgct gcaacgattc gtaagtgaca
      421 actccgaact cgcccacgag cgcggtccga gcgccgcaac cgcgcgcgat cgtatcgtcg
      481 agcacattct gcgcgagatt caatttttcc ggcgcgacgc gatagtcgtg cccgctgatt
      541 gcagaaaaag tcatcaccgc tatttcttgg gtttctttgc cgggcctttt ttctgaaacg
      601 gccagtcggc gtcgtaagga taggtatagc gcggcgggcg cttttccacg aaggcgcgca
      661 tcccctcttg gcagtctttg gttcgggtaa tttccagcac ggcatcgagc tcctgctgat
      721 aaccttcgtc ggtgcgattc cagttccagt acattttgac cagccgtttg gcttgccgca
      781 cggacaaata gggatttgcc gcgatgcgcc cggcaagagc gaacgccgta tcgagaagct
      841 tggccgccgg cacgacttct tcgaccagac cgatgcgcaa tgcttctttg gcatcgatga
      901 tctcgccggt gagaatcaga cgcatggcgc gaccgacgcc gatcaacttg ggcaaattgc
      961 gcgcgccgcc gctttcgggc acgaatccgg ccggcaccgc cacttcgccg aagcgcgccc
     1021 gatccgaggc gatgcgcata tcgcacagcg tcgccatctc gagaccgacg ccgaccgccg
     1081 ggccgttgat ggcggcgatc gtcacttgcg gtaaatcttc gagcttgcgc atggcactct
     1141 gcaaaacccg gtggcgcaga tcgttgaaaa agtactcggc catctccttg tacgggccag
     1201 tgatacccat ggatccttcg aaggcgccga gcacgtcgcc ttccgacttg agatcgccgc
     1261 cggcgcaaaa gccccgccct tcgccggtca gaatcacgac cttgacgatg gagttgcgcg
     1321 cgatctcact gcataaggca tcgagctcca ggcgcatgag cgggtcgacg gcgttgagtt
     1381 tctccgggcg attcaaggcg atgacgccga tgcacggttc gccgggggta ttggggttgt
     1441 cgtgcaccga ccctttgatc tctttgtaat ccatcgaggg ctcctgggac gattgataga
     1501 gtgcgtcgat cttttcgacc ccgtgacatc cccttagcta agaagatcga cgggaatggg
     1561 gttaaaccgg tgaggaaaat ccctccatcg gctgcatcaa cggcggcttg atttgatgcc
     1621 aagcaccgtt cgaaacttca ttatttcttt ttctgctggc cgtaataaga agtgttgacc
     1681 gcgacttcgt cggtgcgttt tcgttggcgg gcaatctttt cgccggtctg ccagaactcg
     1741 ccggcgacgg cgagcttcgc ctcctcgtca agctccggat tccaatcgcc gagcgagtag
     1801 ccgaaccagg gcgattcggg ctccaacttc ggcaactcga gcctctccca gagtttgcgc
     1861 gcgcgctcca tgtactcctt cttcggcaaa gaaatcggcg gaaacgtttc tttcaacgtc
     1921 gcatcccaga gcaaacagga atcgtcggcg ccgccgcgcg cgtcatggcg cggcgcgtga
     1981 ccgacgtcag tgccgcggat gatttgcacg tcgcggtgcg gttgcgagcg gtagccgagc
     2041 gcccagaaga ccgcgtcgag attctcggga tcgatatcgt cgtcgaccgc gatgacgatc
     2101 ttcgacatcg acgggcgaaa cgtgaccgcg gccatcaagg cgcgccagac ttcggccttg
     2161 ctcggctggc gcatttgaat gacagtcagc ttctgcgtcg ccgtcagcgg ctcgtgcaac
     2221 atcacacggg tcactgagtg gatg
//
LOCUS       DATIRS010001221         1992 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_485680, whole genome shotgun sequence.
ACCESSION   DATIRS010001221 DATIRS010000000
VERSION     DATIRS010001221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1992)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1992)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1992
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_485680"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            251..1849
                     /locus_tag="VLM90_15685"
     CDS             251..1849
                     /locus_tag="VLM90_15685"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSQ14467.1"
                     /translation="MNNSDLIVRTLAQAGVRWVFGIPSGPVLPLIEALRGSSVEFVLT
                     ASETSAAFMASAVGYLTGVPGVCASTVGPGATNLTTGVGCAWLDRAPLLAITCNVATP
                     WLERRIQMRIDHHKLFEPLTKATFACRHGNVGEIFAQALGIATQEPPGPVHLDLPEDV
                     AQAVALETRGAPTAPALLPDLSNEIAAALAQALHSSKRPLLISGLSFTRCAASQDLLA
                     FVERQNIPFVTTMHGKGFLPESHVNSAGVIGRARRSDIKKFTDRADLVIAVGYDPIEI
                     NYEEWVKSGTPIIHISTEAAESGNGVNLIWNRACNLDAAIGATSAAPAVTNDWSIRDF
                     HAHREIWDKALRPASANFAPFQVLDILRERLPAGGVLAYDVGAHTHQIASQWRTDVAR
                     TLLATNGWSSMGYGMPAAFAAKLVHPERAVVFVVGDGGFQMTAGELSLARRLNLNVPV
                     IVLNDGWLGLMKVKQERRSYPLSGVRLGAPPDSPAHYFGVPCRPAKTPDEFRAELDWA
                     FALNGPGVVEAFVDAEAYSATVYD"
BASE COUNT          364 a          605 c          617 g          406 t
ORIGIN      
        1 agttcggcaa gctgcatgtg catatcgaga atataccgag tgaaaacccc aagaccggaa
       61 agttaaccgc gctgtcgatt attcgcgccg tgcaagacgt cgtcgacccg gtgcggattg
      121 gcaattagcg cccgggtcga ggatcgacaa tggaggatcg aggatcgaaa agcgccatct
      181 tctatcctcc gtcctcgacg atagcgtcag gcgatggccc gcgctaagac ggcaaggttg
      241 aatcaaatcc atgaacaaca gtgatctgat cgttcgcaca ttggcacagg ccggagtgcg
      301 ctgggtattc ggcattccca gcgggccggt gttgccgttg atcgaagcgc tgcgcggcag
      361 ttcggttgag ttcgtgctca ccgccagcga aacttcggcg gcgttcatgg cttcggcggt
      421 gggttatctg accggggttc ccggcgtatg tgcgtcgacg gtcggtcccg gcgcgaccaa
      481 tttaaccacc ggcgtcggtt gcgcctggtt ggaccgcgcg ccgctgttgg cgatcacttg
      541 caatgtcgcc acgccttggc tcgagcggcg tattcagatg cgcatcgatc atcacaagct
      601 attcgagccg ctgaccaagg cgaccttcgc ttgccgccat ggcaatgtcg gcgagatctt
      661 cgctcaagcg cttggcatcg cgacgcaaga accgccgggg ccggtgcatc tcgacttgcc
      721 ggaggatgtc gcccaggcgg tggccctgga aacccggggc gcgccgacgg cgccggcgct
      781 tctgccggat ttatcgaatg aaattgccgc ggcgcttgcg caggcgttgc acagttccaa
      841 gcggccgttg ctcattagcg gtttgtcgtt cacccgctgc gcggccagtc aggatttatt
      901 agcattcgtc gagcggcaaa atattccatt cgtcacgacc atgcatggca aagggttttt
      961 gccggagagc catgtaaact cggccggcgt catcggccgg gcgcgacgca gcgatattaa
     1021 aaagttcacc gaccgggccg atctcgtcat tgccgtcggc tacgacccca tcgagatcaa
     1081 ttacgaagag tgggtgaagt ccggtacgcc gatcatccac atcagcactg aagcggctga
     1141 gagcggcaac ggtgtgaatc tgatttggaa tagggcgtgc aacttggacg cagcgattgg
     1201 cgctacgagc gccgctccgg ccgtgaccaa tgactggtcg ataagggatt tccacgccca
     1261 tcgcgagatt tgggacaaag cgctccgccc agccagcgcg aactttgcgc cctttcaagt
     1321 tttggatatt ttgcgcgaga ggcttccggc cggcggcgtc ctggcctacg acgtcggcgc
     1381 gcacacccat caaatcgcgt cgcagtggcg caccgatgtg gccagaactc tgctcgcgac
     1441 caacggctgg tcgtcgatgg gctacggcat gcccgcggcc ttcgccgcca agctggttca
     1501 tcccgagcgc gccgtggtct tcgtcgtcgg cgacggcggt tttcagatga ccgccggcga
     1561 gctgtcgttg gcgcgccggc tgaatttgaa cgtgcccgtg atcgtgctca acgacggctg
     1621 gctcggcttg atgaaagtga agcaggagcg gcgcagctat ccgctctcgg gcgtgcgtct
     1681 cggcgcgccg ccggattcgc cggcgcatta tttcggcgtg ccttgccgtc cggcgaagac
     1741 gccggatgaa tttcgcgccg agctggattg ggccttcgcg ctcaacggcc ccggcgtcgt
     1801 cgaggcattc gtcgacgccg aagcctattc cgccacggtc tacgattgag catcgcgctt
     1861 ttccatgtcc gaactcacgc ctaagcgcga ttctttccgt tggacgatct tggcactgat
     1921 cagcgtctcc cacatcatcg gcgccaccgc tcagtacggc atcaatacgc tcgcgccttt
     1981 ctacaaagac ga
//
LOCUS       DATIRS010001222         2954 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_780433, whole genome shotgun sequence.
ACCESSION   DATIRS010001222 DATIRS010000000
VERSION     DATIRS010001222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2954)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2954)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2954
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_780433"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(303..674)
                     /locus_tag="VLM90_15690"
     CDS             complement(303..674)
                     /locus_tag="VLM90_15690"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSQ14468.1"
                     /translation="MAGQKQPSGKLVGSVGELEHGKSKKFTMKRAGREFEALLVNFDG
                     THFAYVNRCPHTGITLDWVNNQFFSSDNRYLMCATHGAVFQPPTGECIWGPCVGLSLQ
                     SLPIEISDGQIYAKLPGAADE"
     gene            complement(690..1169)
                     /locus_tag="VLM90_15695"
     CDS             complement(690..1169)
                     /locus_tag="VLM90_15695"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSQ14469.1"
                     /translation="MAITIYLSLIFLVVYLIGLAVRRWIFVRDRKFMAAQSRSGGRVV
                     ARVDEVQPGAVKKFWLICQKYRLDAILINDRGNYYAYVNRCRHMPTPLDFVRDEFFSD
                     DGRYLQCYTHGALYEFASGVCVSGPCKGESLYRLPVQVDRGEVLVGCPEGDLRPMGE"
     gene            complement(1190..1513)
                     /locus_tag="VLM90_15700"
     CDS             complement(1190..1513)
                     /locus_tag="VLM90_15700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14470.1"
                     /translation="MRQCAYCGERAGLFGRICSECKRLLARVDELRGKVGFGQFLDGL
                     AETGIAKEKILRFLDADPDGKGSVRDQVTAEMTSELMKVMGIAGQQTAPEVKRIRNSV
                     NKESD"
     gene            complement(1540..2343)
                     /locus_tag="VLM90_15705"
     CDS             complement(1540..2343)
                     /locus_tag="VLM90_15705"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF012673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HSQ14471.1"
                     /translation="MTTDFQFSQELGTAEQAARDAGAAIMALFRGKYDVHEKSKNNPV
                     TTADLEANRIIHERIAETFPNDGWLSEEDADSERRLALSRVWVVDPIDGTKEFIEGVP
                     QFAISIGFVVDGVAQAAVVYNPAQEEFFKGAAGHGAYLNDNAIRVTKRTAIDGARLLV
                     SRSEPAKKFQVFVDRCAIEPVGSIAYRLAKVAGGDGDGTLTFRSIHEWDICAGVLMVE
                     AAGGKVVDGDGHAMRFNRLPAKHRGVVAAGAALTSGLQGLWATAMNNKT"
     gene            complement(2420..>2954)
                     /locus_tag="VLM90_15710"
     CDS             complement(2420..>2954)
                     /locus_tag="VLM90_15710"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HSQ14472.1"
                     /translation="GSLAVAEGDRVALAINRYVDRFAAAGAPIFATRDWHPAQTSHFK
                     DFGGIWPVHCVQNTPGAEFHPSLRLGAGAMVVSKGTAADVDSYSGFDAFDAQGTALAA
                     LLRERGVEQIFVGGLATDYCVKQTVLDGVKHGFAVVLLMDAIRGVDLAPGDSTRALEE
                     MHHAGARAIGGIEELGF"
BASE COUNT          637 a          933 c          798 g          586 t
ORIGIN      
        1 cgcggaatga taaggatgtg caccggcgcc ttcggggcga tgtctttgaa cgccagcact
       61 gcttcatctt gataaactaa attagccttg attttaccgt caacaatgcc gcagaacagg
      121 caatcgctca tcaaaaactc cttgaaacta tttcacttga agcgaaacgc tcgaatatcc
      181 ggaaggcaca ccgcagaggc tcagagtaaa gctgtttttc gatgaaggga cactccgagc
      241 gctgcgatct cagtgcctct gcggcgaaac ccctctttca tcgagtgtca aagcagcttt
      301 ttttactcgt cggccgcgcc gggcaatttc gcatagatct gcccgtcgga gatttcgatc
      361 ggcaagcttt gcagcgatag tccaacacag gggccccaga tgcattcgcc ggtgggcggc
      421 tgaaaaaccg cgccatgggt ggcgcacatg agataacggt tgtccgagct aaaaaattga
      481 ttgttgaccc aatccagggt gatgccggtg tgagggcagc ggttgacata cgcgaagtgg
      541 gtgccgtcga agttgaccag cagcgcttcg aactcgcgcc cagcgcgctt catggtgaac
      601 ttcttgcttt tgccatgctc cagttcgccc accgatccga ccagtttacc cgacggttgt
      661 ttctgtccag ccatagctga tctcctatcc tattctccca tcggtctcaa atcgccctcg
      721 ggacagccga ccaatacttc gccgcgatcc acttgcaccg gcaggcgata gagcgactcg
      781 cccttgcagg gacccgagac acagacgccg ctggcgaact catagagcgc gccatgagta
      841 tagcattgca aatagcggcc gtcgtcgctg aaaaactcgt cgcggacgaa atccaacggc
      901 gtcggcatat ggcggcaacg gttgacatag gcgtagtagt tgccgcgatc gttgatcaga
      961 atcgcgtcga gccggtattt ctggcagatc agccagaatt ttttgaccgc acccggctgc
     1021 acctcgtcga cccgcgcaac cacccggccg ccgctgcggc tctgcgccgc catgaatttg
     1081 cggtcgcgta cgaaaatcca gcgccgcacc gcaagaccga tcaaatagac cacgagaaaa
     1141 atcagcgaca gatagatcgt tatggccatg gacgagatta ccgcaaggac tagtcggact
     1201 ctttgttgac gctattgcga atccgcttga cctccggggc ggtctgctgt ccggcgatgc
     1261 ccatgacttt catcaactcg ctggtcatct cggcggtcac ctgatcccgc acgctgccct
     1321 tgccgtcggg atcggcatcg agaaatctaa gaatcttttc cttggcgatc ccggtctcag
     1381 ccaaaccgtc gaggaattga ccgaagccta ctttaccgcg cagttcatcg acccgtgcga
     1441 gcagcctttt gcactcgcta cagattctcc caaacagtcc ggcacgctcg ccgcaatagg
     1501 cacattgacg catggcaatg atttcactcg cgaataaagc tatgtcttgt tattcatcgc
     1561 cgtggcccat aggccctgca accctgatgt aagcgccgcg ccggcggcca ctacgccgcg
     1621 atgtttggcc ggtagacgat tgaaacgcat cgcgtggcca tcgccgtcga ccaccttgcc
     1681 gcccgccgct tcgaccatca agacgccggc acagatatcc cactcgtgga tcgaacggaa
     1741 ggtcagcgtg ccatcgccgt cgccgccggc cactttcgcc aggcggtagg cgatgctgcc
     1801 caccggttcg atggcgcagc ggtcgacgaa cacttgaaat tttttcgccg gctcggagcg
     1861 gctcaccaaa agccgcgcac cgtcgatcgc tgtacgcttg gtgacgcgaa tcgcattatc
     1921 gttcaagtac gcaccatggc cggccgcacc tttgaaaaat tcctcttgcg ccgggttgta
     1981 caccaccgcc gcctgcgcca cgccgtcaac gacgaagccg atggagatcg cgaactgggg
     2041 caccccttcg ataaactcct tggtgccatc gatgggatcg acgacccaga cccgcgacag
     2101 cgccaaacgg cgctcgctat cggcatcttc ctcagacagc cagccgtcat tgggaaaggt
     2161 ctcggcgata cgctcgtgga tgatccggtt cgcttcgagg tccgccgtgg ttaccggatt
     2221 gtttttactc ttttcatgga cgtcgtactt gccgcgaaac agcgccatga tcgcggcgcc
     2281 ggcatcacgc gccgcttgct cagcggtgcc aagctcctgg ctaaattgaa aatcagtggt
     2341 cacaggtatc ctttcaaccc aggcaaacgg accaattaaa cactacaact ggcatggcgg
     2401 caaatggtcc gacaatcaat tagaaaccga gctcttcaat gccgccgatg gcccgcgccc
     2461 cggcatggtg catttcttcc agcgcccgcg tcgaatcacc gggagccaga tccacgccgc
     2521 gaatcgcgtc cattaacaac actacagcga agccatgctt gacaccgtcg agcaccgtct
     2581 gtttgacaca gtaatcggtc gccaagccgc cgacgaaaat ttgctcgacg ccgcgctcgc
     2641 gcagcagcgc agccaaggcg gtaccctggg catcgaacgc gtcgaagccc gagtaactat
     2701 cgacatcagc tgccgtcccc ttggaaacga ccatcgcgcc ggcgccaagc cggagcgacg
     2761 gatggaactc agcgccgggc gtgttttgca cgcagtgtac cggccagatg ccgccgaagt
     2821 ctttgaaatg gctcgtctgc gccggatgcc agtcgcgggt ggcgaagatc ggcgctcccg
     2881 ccgcggcaaa acggtcgacg taacgattga tcgctaaagc gacccgatcg ccttccgcca
     2941 cggcgagcga cccg
//
LOCUS       DATIRS010001223         1654 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1272951, whole genome shotgun sequence.
ACCESSION   DATIRS010001223 DATIRS010000000
VERSION     DATIRS010001223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1654
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1272951"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..210
                     /locus_tag="VLM90_15715"
     CDS             <1..210
                     /locus_tag="VLM90_15715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14473.1"
                     /translation="ISNVLSGMGVNIESMETKTYAAPISGTPIFQLEADLAVPTRTNI
                     AELRERFSEIQRQENIDIDLTAAKS"
     gene            complement(311..1621)
                     /locus_tag="VLM90_15720"
     CDS             complement(311..1621)
                     /locus_tag="VLM90_15720"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ14474.1"
                     /translation="MDSGASTSNGVVHRLLSRAIDVRPAELRALGWSWLYIISVFVSY
                     YILRPIRDEMGVAGGVENLQWLFTGTLIGMIAVNPPFAALVAKLPRVRFIAITYRFFA
                     ANLLIFIVLLQLASGQQNIWIGRVFFIWASVFNLFVVSVFWALMVDVFDTEQSKRLFG
                     FIAAGATLGGIIGSSLTAAFAKQVPATYLLFGSAVLLEVAVFCVGRLSRLSSAVSQRP
                     AGHSDESLIGGSVLSGLSHALKSPYLINVSVFLLLFAITSTFLYFQQAEIARKYFADR
                     GARTAFFASVDLWVNILTLGAQVFVTARTIKRIGVALTLALLPLLSVFGFGTLAWAPT
                     IAALVAFQVIRRAGNFAFARPTREVLFTVVPREDKYKAKSFIDTVVYRFGDQVGAWSY
                     AGLGALGLAMTGVSLVAVPISIVWLVISLWLGRKQKSLEAVAAG"
BASE COUNT          447 a          501 c          444 g          262 t
ORIGIN      
        1 atcagcaatg tcctgagcgg catgggcgtc aacatcgaat cgatggaaac caagacctac
       61 gccgcgccga tcagcggcac gccgatcttt cagctcgaag ccgacctggc cgtgccgacg
      121 agaacgaata tagccgaact gcgcgaacgt ttcagcgaga ttcagcggca ggaaaacatc
      181 gatatcgatc tgaccgcggc gaaaagttaa caaaagccag ttccaattgt tccaaacgtt
      241 ccagtagttc caattggctc ggagttcccc agtgtcgttg aaacttttgg aacacctgga
      301 acctttggaa ctaccccgcg gctaccgctt caagcgattt ctgctttctc cccagccaca
      361 ggctaatgac cagccaaaca attgaaatcg gcacggcgac tagcgaaacc ccggtcatcg
      421 ctaaaccgag cgcgcccaag ccggcatagg accaggcgcc cacctgatcg ccgaagcgat
      481 acaccacggt atcgatgaag ctcttggcct tgtacttatc ctcacgtggc acgacggtga
      541 acagcacctc gcgggtcggc cgggcgaagg caaaattgcc ggcgcggcgg atcacttgaa
      601 aagccaccag cgccgcgatg gtcggcgccc aagccagggt gccgaaaccg aagacgctga
      661 gcaacggcag caacgctaag gtaagcgcta caccgatgcg tttgatggtt ctcgcggtga
      721 cgaacacctg cgccccgaga gttagaatat ttacccaaag atcgacactg gcaaaaaacg
      781 ccgtgcgcgc gccgcggtcg gcgaaatatt tcctggcgat ctcggcttgc tggaaataaa
      841 gaaacgtcga ggtgatcgcg aagagcaaaa gaaaaacact gacgttgatc agatagggcg
      901 acttgagcgc gtgagacagg ccgctcagaa ccgaaccgcc gatgagcgac tcgtcgctgt
      961 gaccggcggg ccgctggctc accgccgaag acaagcgcga caagcgacca acgcagaaga
     1021 ccgcgacttc cagcaatacg gcggagccaa acaaaagata tgtcgccggc acctgcttgg
     1081 cgaaggccgc ggttaagctc gaaccaataa taccgccgag ggtcgcgccg gcggcgatga
     1141 agccgaacag ccgcttgctc tgctcggtgt cgaacacgtc gaccatcagc gcccaaaaaa
     1201 ccgagacgac aaagagatta aacaccgacg cccagataaa gaacactcgg ccgatccaga
     1261 tattctgttg ccccgacgcc agctgaagca acacgatgaa gatcaaaaga ttggccgcga
     1321 agaagcggta ggtaatcgct atgaatctga cccgcggcag tttcgccacc agcgcggcga
     1381 aaggcggatt gacagcgatc atgccgatca gcgtaccagt gaaaagccat tggagatttt
     1441 ccactccgcc ggccacgccc atctcgtcac ggatcggccg gagaatataa taggagacaa
     1501 aaactgaaat aatataaagc catgaccagc cgagggcgcg caactcagcc ggccggacat
     1561 cgatcgcccg cgatagaagt cgatgcacaa cgccattact cgtcgatgcg cccgaatcca
     1621 tcactcctca cacctcacca ctcgctccca actt
//
LOCUS       DATIRS010001224         2154 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1665879, whole genome shotgun sequence.
ACCESSION   DATIRS010001224 DATIRS010000000
VERSION     DATIRS010001224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2154
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1665879"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..410)
                     /locus_tag="VLM90_15725"
     CDS             complement(<1..410)
                     /locus_tag="VLM90_15725"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14475.1"
                     /translation="MAKHKIISLLGLMAFTSAPLHAHAAEPLRKLRVAVTAISGGMSP
                     PWAAHEAGIFAKYGFQVEVIAMPSGLQGMNTLIAREVDFVQIAGGTTAGAAVGGADVK
                     IIATTVGTLLQNFIARPEIEKPEQLRGKNVGISR"
     gene            complement(612..1748)
                     /locus_tag="VLM90_15730"
     CDS             complement(612..1748)
                     /locus_tag="VLM90_15730"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HSQ14476.1"
                     /translation="MLPRSELSHRQSWRWSLKITDVKATLHRVPVEVPLLQEKIVTSI
                     VFVTVETDGGVTGYGLTRGSQRFGIKEFTNRELAPFLRGKNPLETERVWNQLYKQFNP
                     RAQTGMWSSAVSAIDIALWDIKGKHYKEPVWRLLGGAQNPVPAYVTFGVKQYSKEQLV
                     EVAKQLVAQGEKRLKMVVAVDPENPKVDAARVRAVREAVGDDVELMIDANYLFSFNRA
                     LELCKLVEPFQITWFEEPVYQNDAALLADLRRHTSIPIAAGQNEGHRFRHRELIANHA
                     VDIAQPNVCSVGGYTEAVKVAAMAQAFNLPIANGGGWPHHNAHLQAAMANGWRVEFHF
                     EMWGVGDRIYKEPPAPVNGWVTLPETPGLGLEPRLDALQEYEEK"
     gene            1839..>2154
                     /locus_tag="VLM90_15735"
     CDS             1839..>2154
                     /locus_tag="VLM90_15735"
                     /inference="COORDINATES: protein motif:HMM:NF019339.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSQ14477.1"
                     /translation="MKHANRFVGALLICLLAGCATFDAGGQFLSGRRALLANDPETAL
                     GYFLGAAQRNPNYVYIAVNFKEGIWTYVGRAQYLTKRYKEAQESLERALAMDKDDNMA
                     RLY"
BASE COUNT          395 a          642 c          651 g          466 t
ORIGIN      
        1 aagcggctga tgccgacgtt tttgccgcgt agttgctccg gcttttcaat ctccggccgc
       61 gcgatgaaat tttgcaatag cgtgcccaca gtggtggcga tgattttcac gtcggcgccg
      121 cccaccgccg cgccggccgt cgtgccgccg gcgatttgca cgaagtcgac ctcgcgggcg
      181 atcagagtgt tcatcccctg aagcccgctc ggcatggcga tgacttcgac ctgaaagccg
      241 tatttggcga agatgcccgc ttcgtgcgcc gcccagggcg gcgacatacc gccggagatc
      301 gccgtgaccg ccacgcggag tttgcgcagt ggttccgcag cgtgggcatg cagcggtgca
      361 ctggtaaaag ccatcagacc caggagagag attatcttgt gcttcgccat ccggggtctc
      421 cgatggaatg cctcgactca cgcgacagat atccccagct tatgaagcag tcaagaaaat
      481 tcggagaggg gagacttcag aggaatttgt agctgcgacg cgctatcttt cgaaaaggca
      541 gacacggagg tgcccctaca tcgctgcgcc gattaatcca agatttccga ttaatctctg
      601 ttgcttggtg cctacttctc ttcatattcc tgcagcgcgt ccaggcgcgg ctccaggccg
      661 aggccgggag tttccggcaa agtcacccag ccgttgaccg gcgcgggcgg ttctttgtaa
      721 atccggtcgc cgacgcccca catctcgaag tgaaactcaa cgcgccagcc gttggccatg
      781 gccgcttgca ggtgggcgtt gtggtgcggc cagccgccgc cgttggcgat gggcaagttg
      841 aacgcttgcg ccatggctgc gactttgacg gcttcggtgt agccgccgac ggaacacacg
      901 ttcggctgag cgatgtcgac ggcgtggttg gcgatcagct cgcggtggcg aaagcggtgg
      961 ccttcgttct gtccggcggc gatgggaatg ctcgtatggc gacgcagatc agcgagcagc
     1021 gcggcgtcgt tttgatagac cggctcttcg aaccaggtga tttgaaatgg ctcgaccagc
     1081 ttgcacaact ccaatgcccg gttgaacgag aacagatagt tggcgtcgat catcaactcg
     1141 acgtcgtcgc ccaccgcttc gcgcacggcg cgcacacgcg cggcgtcgac cttcgggttc
     1201 tcgggatcga ccgcgacgac catcttgagt cttttctcgc cctgggcgac gagctgcttg
     1261 gccacttcta ccagctgttc tttggaatac tgtttgacac cgaaggtaac gtaggccggc
     1321 accgggttct gcgcgccgcc gagcaggcgc cagaccggtt ccttgtagtg cttgcccttg
     1381 atgtcccaca gcgcgatgtc gatggcgctc accgccgagc tccacatgcc ggtctgggcg
     1441 cgcggattga actgcttata gagctgattc cagacgcgct cggtttccag cgggtttttg
     1501 ccgcgcagga acggcgccag ttcccggttg gtaaactcct tgatgccgaa gcgttgcgag
     1561 ccgcgggtga ggccgtagcc ggtaacgccg ccgtcggtct ccaccgtgac aaagacgatg
     1621 ctcgtgacaa ttttctcttg cagcagcggc acctccaccg gcacgcggtg cagcgtcgct
     1681 tttacgtcag tgatcttcag actccacctc caactttggc gatgacttag ctcagatcta
     1741 gggagcaagt caaactttcc gcgcgtgccg gctgcatttt attttttttt atcccctcca
     1801 ttgacacgca tcctgccgag aactagcctc taatcgttat gaaacacgca aatcgtttcg
     1861 taggcgcttt gctgatttgt ctgttggcag gctgcgccac gttcgatgcc ggcgggcagt
     1921 ttctctccgg ccggcgggcg ttgctggcca acgacccgga gaccgcgctg gggtattttc
     1981 tcggcgcggc gcagcgcaat ccgaactacg tctatatcgc ggttaacttc aaggaaggca
     2041 tttggaccta cgtcgggcgc gcgcagtact tgaccaagag atacaaggaa gcgcaagagt
     2101 ctctggagcg agctctggca atggacaaag acgataacat ggcacggttg tacc
//
LOCUS       DATIRS010001225         5462 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1567839, whole genome shotgun sequence.
ACCESSION   DATIRS010001225 DATIRS010000000
VERSION     DATIRS010001225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 5462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5462)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5462
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1567839"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..828
                     /locus_tag="VLM90_15740"
     CDS             <1..828
                     /locus_tag="VLM90_15740"
                     /inference="COORDINATES: protein motif:HMM:NF024180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAT domain-containing protein"
                     /protein_id="HSQ14478.1"
                     /translation="LLRSAAISYLPSLSALASLRRGATPSAANRFIGFGDPVVGGGAK
                     AAAPVAARGMVRRNAKAPAAPSSPTSNFELLQALPDTADEVRDIAKILRADDSRDIHL
                     GRRASEQSVKNADLSAYRVVMFATHGLVPGELPELNQPALALSNPAITGEKEDGLLTL
                     AEILGLKLRADWVVLSACNTASADGQASEAVSGLGRAFFFAGAKALLVSHWPVETVSA
                     KLLTTELFKRQSSDTKISRAQAVREASLAVMQQSSGKSYSYAHPMFWAPFVVVGDGG"
     gene            879..3902
                     /locus_tag="VLM90_15745"
     CDS             879..3902
                     /locus_tag="VLM90_15745"
                     /inference="COORDINATES: protein motif:HMM:NF024180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAT domain-containing protein"
                     /protein_id="HSQ14479.1"
                     /translation="MHSTAMVLTIALTIASGSGRLFAAAAPSTEQSSRSQALLDAPPP
                     DPNNTPKAELLKIYLARAQAAGAQRDTDRQLRELNEAIRVVGPKDPLSYSLYDSAART
                     LVDSGDWHGARGMRENALQVTADRGRKFFQANFLAGIAVRLLDREGGKRYLATADELF
                     AAVRATNRDWPQFRDLWEALLSDAKANVNAMLGFPKDAEADYRTCVTAIRSYLDKNPK
                     DSGIWYPYLPRCLSRAMEHAAIVGKVREAGAYINDARAAARVVAQKQQRDSFEASAVS
                     RSIARVYLEQGLIREATSLIETSIAQLQRIPGGEGGVQVADMRLLLAQSEMAQGNWLK
                     ADEIFKAWRDGQRANKQQSALTGTISPEWGYVMLRLGRTQEGLAMLGSILKFREKFDD
                     AGSVRLWDGRAFHALGLGAMGQSDAAIKTLSAAIPKILELRRDKNTAGEDGYLSSARL
                     NWFLDGYIALLADMHQKGARVEGIEPAAEAFRMADVARGSKVQKALSAAIVRAGNNDP
                     ESAAAMRRAQDLEHAVKVASESLTILQSSENNQEKTQALAKAQAELVRLRQDNEKAQA
                     ELRLKMPNYVELMEPKTQTIADTQKLLRADEALISLYTTQDKTLVWAVKTNGQASFSV
                     VDLPQASLVESVARLRKVLDPSDVDINKLPSFEYDTAYDLYRKLLAPVEAGWKGAREL
                     IIVSHGALSEIPLSVLVTAPFKPTKTSQSSTPFAEHAEAPWLLKQVAISYLPSLSALA
                     SLRTTVAQPAAKSFIGFGDPLFKANQTPSGVSTSVASRGIVRRNAMALGAPANTRQGQ
                     RRSSNLELLEPLPDTSEEVRDIAKILRADTGNDVHLGKGASEQFVKQSDLSQYRVVMF
                     ATHGLVAGELPELSQPALALSNPTITNEKDDGLLTLAEILELKLRADWVVLSACNTAS
                     ADGQASEAVSGLGRAFFFAGAKALLVSHWPVETVSAKLLTTELFKRQTEQTKLSRAQA
                     LRDASLAVMQQTAGKSYSYAHPMFWAPFVVFGDGG"
     gene            3999..>5462
                     /locus_tag="VLM90_15750"
     CDS             3999..>5462
                     /locus_tag="VLM90_15750"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HSQ14480.1"
                     /translation="MFSPEQLADLLAMPFFAGLNPATLNHLQADLEPVHLNGGALLFA
                     AGAAADSMYVVRSGRLRVTIDRDDGTTESLRELARGDTVGELALLTGESRSASVWAIR
                     DTELVKISQPAFESAVKSDPKLIRQIAVQLASHERQGRDAALLRRNLRTIALVPAEDP
                     VRLHRFAAALTEAMQTAGATLRLGRETLPALRGLIDQTMVPPQGTGQLSALLSSLETN
                     HRFVVYEAESELSPWSQLCIRQADLILVVGTADSAPDVAHLHRLRRYLSENRIATAIE
                     LVLLHEPRFIGRADTARWRATLDFAAHHHIAPSHSGDIARLVRTFTGTAVGLVLSGGG
                     ARGFAHIGVIRALTERQIPIDFIGGTSMGAVIAAQHALGWDWQTMAQVNRAEWPRCHP
                     QKNYTLPLIAINSGKRMDRMLARMLGEATIDDLRTGFFCVSTNLTHAEAKIHRQGSLW
                     KAVRASVSIPGIGPPAIENGEIFVDGGLVDNLPVAAMK"
BASE COUNT         1151 a         1669 c         1593 g         1049 t
ORIGIN      
        1 ctgctcagga gcgccgcgat atcttatctg ccatcgttgt ccgcgctggc aagcctgcgc
       61 cgcggcgcga caccgtcagc ggcaaatcgt tttatcggct tcggcgatcc ggtcgttggt
      121 ggcggcgcga aagcagccgc gcccgtcgct gcgcgcggca tggtgcggcg taatgccaag
      181 gctcctgcgg cgccgagttc gccgacgagc aattttgaat tactccaagc cctgcctgac
      241 accgccgatg aagtgcgcga catcgcgaaa atcctccgcg ctgacgatag ccgcgatatt
      301 cacctgggcc gacgcgccag cgagcagtcg gtgaaaaacg ccgacctcag cgcctaccgg
      361 gttgtcatgt tcgcgactca cggcttggtg ccgggcgagt tgccggaatt gaaccaaccg
      421 gcgttggcgc tcagcaatcc ggctattacg ggagagaaag aagacggact gctcacccta
      481 gcggaaattc tcggcctcaa gttgcgcgcc gattgggtcg tcctatcggc ctgcaacacc
      541 gcatccgccg acggccaggc atccgaagcg gtctcaggcc tgggccgcgc ctttttcttc
      601 gccggcgcca aagctttgct ggtttcgcac tggccggtgg aaacggtttc ggcgaaactg
      661 ctgacgacgg agttgttcaa acgacagtct agcgatacaa aaatcagccg ggcccaggcg
      721 gtgcgcgaag cttcgctcgc ggttatgcaa caatcttcgg gcaagtcgta tagctacgct
      781 catccgatgt tctgggcgcc cttcgttgtc gtcggcgatg gcgggtagcc aatctctgag
      841 agaaaatcag ccatcatctt ttgcatcacg gtgtgataat gcacagcaca gccatggtcc
      901 tgacaatcgc gctgacaatc gcgagcggca gtggtcgcct gttcgctgcg gccgcaccga
      961 gcactgaaca atcctcaagg tcgcaggccc ttctcgacgc cccgccgccg gacccgaaca
     1021 acacgccgaa ggcggagttg ctcaaaatct atctagcacg ggctcaggcc gctggcgccc
     1081 agcgcgacac agaccgacaa ttgcgcgaac tcaacgaagc tattcgcgtc gtcggcccga
     1141 aagatccgct gtcgtattca ctttacgact cagcggcacg gacattggtc gattccggcg
     1201 attggcacgg cgccagaggc atgcgtgaaa acgccctcca agtcaccgcc gaccgcggca
     1261 gaaaattttt tcaagcaaac ttcttggcgg gcatcgccgt gcgcctgctc gatcgggaag
     1321 ggggcaaacg gtatctcgcc acggcggacg aattattcgc cgcggtcaga gctacgaatc
     1381 gggactggcc gcagtttcgc gacctctggg aagcgctgct gagcgatgcc aaagctaacg
     1441 taaatgccat gcttggcttc cctaaagatg ccgaagcgga ctaccgtact tgcgtaacgg
     1501 ccattcgttc ctacctcgac aaaaatccca aggactctgg aatatggtat ccatatctgc
     1561 cgcgctgtct gagccgggcg atggaacacg ccgccattgt cggcaaagtt cgcgaagccg
     1621 gcgcctacat caacgacgcc cgcgcagccg cgcgcgttgt cgcccagaag caacagcgcg
     1681 acagtttcga agcgtcggcg gtgtcccgtt cgatagcgcg ggtttattta gagcaaggat
     1741 tgattcgtga agcgacaagt ctaattgaaa cgtccatcgc ccagttgcag agaatacccg
     1801 gcggcgaggg cggcgttcaa gttgccgaca tgcgcctgtt gttggcgcag agcgagatgg
     1861 cccagggcaa ctggctcaaa gcggacgaga ttttcaaagc ctggcgcgac ggccaacggg
     1921 cgaataagca gcaaagtgcg ctgacgggaa cgatctctcc cgagtggggc tatgtcatgc
     1981 tgcgcctcgg ccgcacccag gaagggctgg cgatgttagg gtcaattctc aagttccggg
     2041 aaaagttcga tgacgcaggc tcggtccgtc tctgggatgg ccgggcgttt cacgcccttg
     2101 gccttggcgc aatgggtcaa agtgatgcgg cgattaaaac gctgtcggcg gcgatcccga
     2161 agatcttaga attacgtcgg gacaagaata ctgctggcga ggacggttat ctttcctcgg
     2221 cgcggctcaa ttggtttttg gatggctaca tcgccttgct ggccgacatg caccaaaagg
     2281 gcgcgcgagt agaaggaatt gagcccgctg ccgaagcttt tcgcatggct gacgtggcgc
     2341 gcggcagcaa agttcagaag gcgctctcgg cggcgatcgt gcgcgccggc aacaacgacc
     2401 cagaatccgc cgcggcaatg cgccgcgcgc aggatttgga acacgccgtc aaggtcgcat
     2461 ccgaatcgct gaccattcta caaagctcgg agaacaatca ggagaaaaca caagcgttag
     2521 ccaaagctca agcagagctt gtccgtttgc gccaagacaa tgaaaaggct caagccgagc
     2581 tgcggctcaa gatgcccaac tacgttgaac tcatggagcc gaaaacccag acgattgccg
     2641 acacccaaaa actcctgcgt gcggatgaag cgctgatttc tctgtacacg acgcaagaca
     2701 agacgctagt ttgggccgtg aaaacaaacg ggcaagcgtc gttcagtgtt gtcgatttgc
     2761 cgcaggcatc gctggttgaa agtgtcgccc gtttgcgcaa agtcctcgac ccgagcgacg
     2821 tcgatattaa caaactgccg tccttcgagt acgacaccgc ctacgatctc tatcgtaaat
     2881 tgctggctcc cgtggaggct ggatggaagg gcgccaggga gttgatcatc gtttcgcacg
     2941 gtgctttgag tgaaattccg ctttccgtgc tggtcacagc tcctttcaag ccgaccaaga
     3001 ccagccagag cagcacacct ttcgcggagc atgccgaggc accgtggctg ctcaagcaag
     3061 tagcgatttc ctatctgcct tcgctcagcg cgctggcaag tctcagaacc actgtggcgc
     3121 agccggcggc aaaaagtttt atcggcttcg gcgatccgtt gttcaaggca aaccagacgc
     3181 cgagcggcgt ctcaacgtcg gtggcgtcgc gcggaatcgt gcggcgtaat gcgatggcgc
     3241 taggagcacc ggcgaacacc cggcaaggac aacggcgatc gagcaatctc gaactgctcg
     3301 aacccttgcc cgacacctcc gaggaagtcc gtgacatcgc caagatattg cgcgcggaca
     3361 ccgggaacga tgttcatctc ggcaagggcg cctcggaaca gttcgtcaaa caatcggatc
     3421 tctctcaata ccgcgtcgtc atgttcgcca cccacggcct ggtcgccggt gaattgcccg
     3481 agctatccca accagcgttg gcgttgagca atccgacgat caccaatgaa aaagacgatg
     3541 gcttgctgac cctcgccgag atacttgaat tgaagttgcg cgccgattgg gtcgtgctgt
     3601 cggcctgcaa caccgcatcc gccgatggcc aggcttcgga agcggtttct ggacttggcc
     3661 gcgcattctt ttttgctggc gcaaaagcct tgctggtttc acactggccg gtggaaaccg
     3721 tctcagcaaa actgctcaca accgaattgt tcaagcgcca aaccgaacaa accaagctca
     3781 gccgcgccca agcgctgcgc gacgcttcgc tcgcggtcat gcagcaaact gccggcaagt
     3841 cctacagcta cgcccacccg atgttctggg cacccttcgt cgtcttcggt gacggtggct
     3901 gattcccaag tttccgctgc ttgcaaagcg attcggcaat caagtatgtc aaggcagcgc
     3961 taaacgggaa gtcatctcgc gtgaaccgcc agcccccgat gttttcaccc gaacaactcg
     4021 ccgacctctt agccatgcct tttttcgccg ggctcaatcc ggcgacgctc aaccacctac
     4081 aggccgattt ggagccggtc catctcaacg gcggagcgtt gctgttcgcc gccggcgccg
     4141 cggccgattc catgtatgtc gtacgctccg ggcgattacg cgtcaccatc gaccgggacg
     4201 atggcacaac cgaatcgctc cgtgaactgg cgcgcggcga tacggtcggt gaacttgccc
     4261 tgttgaccgg cgagtcgcgt tcggcgtcgg tgtgggcgat acgcgacacc gagctggtta
     4321 aaatttccca accagccttc gagagcgcgg tcaaatcgga tcccaaactg atccgtcaaa
     4381 tcgccgtgca actcgccagc cacgaacggc aggggcgaga cgcggcgttg ttacggcgca
     4441 atctgcggac catcgcgctg gtgccggcag aagaccctgt ccgcctgcac aggtttgccg
     4501 cggcactgac ggaagcgatg caaactgccg gtgcgacgct ccgtctgggc cgagaaacct
     4561 tgcctgccct gcgcggacta atcgatcaaa caatggtgcc tccccaaggc actggacaat
     4621 taagcgcgct gctgagcagt ttggaaacca accatcgctt tgtcgtctat gaagccgaat
     4681 cggaactttc cccatggagc cagttgtgca ttcgccaagc cgatttgatc ttagtggtcg
     4741 gcaccgccga cagcgcgccg gacgttgcgc atttgcacag gctgcgtcgg tatttgtccg
     4801 agaacagaat cgccaccgcc atcgaattgg tcttactcca tgaaccgcgg tttattgggc
     4861 gcgccgacac cgcccgttgg cgcgcgacgc tagatttcgc cgcgcatcat cacatcgcac
     4921 cgtcgcattc aggcgacatc gccagactcg tccgcacttt caccggcacg gcggtgggac
     4981 tggttctcag cggcggcggc gctcgtggtt tcgctcatat cggcgtcatt cgcgctctca
     5041 ccgaacgaca gatccccatc gatttcatcg gcggcaccag catgggcgca gtgatcgcgg
     5101 cgcaacatgc gctcggctgg gattggcaaa ccatggcgca agtcaaccgc gctgaatggc
     5161 cgcgctgcca tccgcagaag aattacacgc tgccactcat cgcgatcaat tccggcaagc
     5221 gcatggaccg gatgctggca agaatgctcg gtgaagccac gatcgacgat ctgcgcaccg
     5281 gcttcttttg cgtgtcgacc aacctgaccc acgccgaagc caagatacat cggcaaggtt
     5341 cgttatggaa agccgttcgt gccagcgtgt cgatcccagg cataggcccg ccggccattg
     5401 agaatggtga aatcttcgtt gacggcggcc tggtcgataa tcttccggtc gcggcgatga
     5461 aa
//
LOCUS       DATIRS010001226         1505 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_288707, whole genome shotgun sequence.
ACCESSION   DATIRS010001226 DATIRS010000000
VERSION     DATIRS010001226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_288707"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1505)
                     /gene="ligD"
                     /locus_tag="VLM90_15755"
     CDS             complement(<1..>1505)
                     /gene="ligD"
                     /locus_tag="VLM90_15755"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR02776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA ligase D"
                     /protein_id="HSQ14481.1"
                     /translation="PIAGYQKGKLKFDLHGEKLQGGWTLVRSRGSKYGGDKAWLLFKE
                     DDEYARTGPEAQIVDSRPNSVKTQRSLKQIAADPGRVWHSNKSVAENVKTGARKKPKV
                     RIDPAKAAGSRKAALPEFITPQLATATQTSPAGDGWIHEVKYDGYRILARIDAGVVRL
                     YSRNRNDWTKKFPDIARALADLPLENGWLDGEIVILDDKGRSSFQALQNALSAVNTGQ
                     TIYYAFDLPYLNGYDLRRVHLEERKALLKRLIPDSGILRYSEHFHVEGAKFIVEVWGL
                     GLEGMVSKRRDSTYEGTRGNAWLKLKCARQQEFVIGGFTDPEGSRHGFGALLLGVYDR
                     EGKLRYAGKVGTGFDQALLVKMRRALDGLIQDSPPFINPPQGAEARRAHWVKPELVAQ
                     VTFTEWTHDAIVRNASFQGLRDDKRAQDVVREESSGRPKLAPRVSELNEARREAAKVV
                     ARKDDKDTVAGIKLTNGDKLLYPEAGITKRDVALYYEAVGEWILPHLRNRP"
BASE COUNT          265 a          452 c          444 g          344 t
ORIGIN      
        1 gggccgattg cgcaaatgag gcaggatcca ctcgccgacc gcttcgtagt agagcgccac
       61 atcgcgcttg gtaattcccg cctcggggta aagtagttta tcgccgttgg tcagtttgat
      121 gccggcgacg gtatccttat cgtctttcct ggccaccacc ttggcggctt ctcgccgcgc
      181 ttcgttcaat tcggaaactc tcggcgcaag cttagggcga ccgctcgatt cctcgcggac
      241 gacgtcctgc gcgcgcttgt catcccgcag cccctggaac gaagcgttgc gcacgatcgc
      301 atcgtgcgtc cactcggtga aagtcacctg agcgaccagc tccggcttga cccaatgggc
      361 gcggcgcgct tcggcgcctt ggggcgggtt gatgaaaggc ggggagtcct gaatcaggcc
      421 gtcgagagct cggcgcattt ttacgagcag agcctgatcg aatcccgtac ccacttttcc
      481 agcatatcgg agcttgcctt cgcgatcgta gactcccaat agcagcgcgc cgaagccgtg
      541 gcgcgagcct tccggatcgg taaacccgcc gatgacgaat tcctgctgcc gggcgcattt
      601 cagtttgagc caggcgttgc cgcgcgtgcc ctcataggtt gaatcccggc gtttcgaaac
      661 catcccttcg agcccgagcc cccagacttc gacgataaac ttcgcgcctt ccacatggaa
      721 atgctcgctg taacggagga tgccggagtc ggggatcagg cgcttgagca gcgccttgcg
      781 ctcttccaaa tgaacgcggc gcaggtcgta gccgttcaag tacggcagat cgaaagcata
      841 gtagatcgtc tgaccggtgt tgacggcgga gagcgcgttt tgcaaagcct ggaaactgct
      901 ccgtcctttg tcatccaaga tcacaatctc gccatcgagc cagccgttct ccaagggcaa
      961 gtctgccagt gcccgcgcga tatcgggaaa tttcttggtc cagtcgttac gattgcgcga
     1021 atagagacgc acgactccgg catctatccg ggcaaggatt cgatagccgt cgtacttcac
     1081 ttcatgaatc cagccatcac ccgcgggact cgtttgagtc gccgtcgcga gctggggagt
     1141 gatgaattcg ggcaaggccg ctttgcgcga tcccgcggct ttcgccggat cgatgcgtac
     1201 tttgggtttt tttcgagcgc cggtcttgac gttctcggcg acggatttgt tcgaatgcca
     1261 gaccctgccg ggatcggcgg cgatctgttt gaggctgcgc tgagttttaa cgctgttggg
     1321 ccggctatcg acgatctgcg cttcgggacc cgtccgcgca tattcgtcgt cctctttgaa
     1381 caacagccag gctttgtcgc cgccgtattt actgccgcgg cttcttacga gagtccagcc
     1441 gccttggagt ttttcgccgt ggagatcgaa cttgagcttg cctttttggt agcccgcgat
     1501 gggat
//
LOCUS       DATIRS010001227         3874 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_91904, whole genome shotgun sequence.
ACCESSION   DATIRS010001227 DATIRS010000000
VERSION     DATIRS010001227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3874
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91904"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..559
                     /locus_tag="VLM90_15760"
     CDS             <1..559
                     /locus_tag="VLM90_15760"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HSQ14482.1"
                     /translation="LKMIRDPEKFRSFELAGWQEIPTGYHDAFGSLTPQAIDALLDAV
                     RLKKGMRFLDIASGPGYVAAAAAKRGATALGVDFSAAMVAHARRIHSGVEFREGDAEE
                     LPCGNALFDAAAMNFGILHLGQPEKALLEAHRILRSGGRFAFSVWAKPEETIGFGIVL
                     RAVEPWRAARRAARRAAVLSLQRSR"
     gene            603..824
                     /locus_tag="VLM90_15765"
     CDS             603..824
                     /locus_tag="VLM90_15765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14483.1"
                     /translation="MNKVKQLWRLPAGDGLFNAMKDSTVRTAGLLRAQKPAILEKIRD
                     EMRGALAKYTKGKVVELPMPAWVASAVKS"
     gene            complement(976..1401)
                     /locus_tag="VLM90_15770"
     CDS             complement(976..1401)
                     /locus_tag="VLM90_15770"
                     /inference="COORDINATES: protein motif:HMM:NF027666.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase/phosphatase domain-containing protein"
                     /protein_id="HSQ14484.1"
                     /translation="METPGKLNAGLCGTIDLAPTILQRARLAGHNGMQGKSLIPALDG
                     GMTGHESMLIEEHQRRGYMGLANNFRARSLITQQHRLTIYEGVGWGELYDFAADPHEL
                     DNLWNEPGAQPLRQELTEQLARKMIEMTDTSPLATHHGP"
     gene            complement(1414..2583)
                     /locus_tag="VLM90_15775"
     CDS             complement(1414..2583)
                     /locus_tag="VLM90_15775"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HSQ14485.1"
                     /translation="MDRAPNFLFIITDQHRADHLGCYGNPIVKTPNIDRLAQAGTRFD
                     NFYVATPICMPNRATFMTGRMPSLHGARQNGIPLALTATTFVEILRAAGYDTALIGKC
                     HLQSISGARPTIGMPEADPDRVQPPEHLREADKSWLNHGRYDQELRATWQSDPNFELS
                     LPYYGFSQVELAVGHGDEVVGHYDRWLKQRAANGDALRGRKNQLPGNNYIAPQAWRTA
                     IPEELYPSAYVAERTIKYLENYSRSDRAKPFFLQCSFPDPHHPFTPPGRYWDMYNPAE
                     IPLPPSFNPGERPIVPHLRRLYQERTAQEANKDGQRTFAVTEREVREATALTYGMITM
                     IDDAIGSILAWLKTLRLDDDTVVIFTSDHGDFMGDHQLLLKGALHYRGLVRVPCI"
     gene            2703..3218
                     /locus_tag="VLM90_15780"
     CDS             2703..3218
                     /locus_tag="VLM90_15780"
                     /EC_number="3.6.1.55"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005777 - peroxisome [Evidence IEA];
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003986 - acetyl-CoA hydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0008413 - 8-oxo-7,8-dihydroguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_function: GO:0010945 - coenzyme A diphosphatase
                     activity [Evidence IEA];
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0035539 - 8-oxo-7,8-dihydrodeoxyguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0009132 - nucleoside diphosphate metabolic
                     process [Evidence IEA];
                     GO_process: GO:0015938 - coenzyme A catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HSQ14486.1"
                     /translation="MIDAAVLIPVYRSQQGELHIVMILRNPGGVHGGQVAFPGGKHDP
                     VDDTMLDTALREAREELGLVVPREDILAELPMERTRTTGYRVFPYVARITLPDRWQIA
                     EREIAAIIDVRLNDLAGPGAHDKMIDRFPTWRKAEQVSYYRIGDHRLWGLSYRILHPV
                     IPRLVGGDWNV"
     gene            3371..>3874
                     /locus_tag="VLM90_15785"
     CDS             3371..>3874
                     /locus_tag="VLM90_15785"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HSQ14487.1"
                     /translation="MDFNLQPDSPAISAFRQEVRAWLAENMKGSEHLRWSGNWSTREN
                     DEEYKFRRGLAGKLGAKRWLFPTYPEKYGGGGMSLDHQFVLETEIDRYGLSLGSVFYT
                     LSRLVAPAVMKFGTEEQKAEFLPPMMRGELAVWQVLTEPQGGSDVANCQTKAIRDGDD
                     YIVNGQKV"
BASE COUNT          754 a         1055 c         1218 g          847 t
ORIGIN      
        1 actgaaaatg atccgtgacc cggaaaaatt ccgcagtttc gaattggctg gctggcagga
       61 aatcccaacc ggttatcatg atgccttcgg ctcattgacc ccccaggcga tcgatgcgtt
      121 gctcgatgcg gtgcgcttga agaagggcat gaggtttctc gatatcgcca gcgggccagg
      181 ctacgtggcg gctgccgctg ccaagcgcgg cgcgacggcg ctcggcgtcg atttctcggc
      241 ggcgatggtc gctcatgccc ggcgcattca ctccggtgtg gaatttcgcg aaggtgacgc
      301 cgaggagctg ccttgcggca atgctctgtt cgacgccgcg gcgatgaatt tcggcatcct
      361 ccatcttggt cagccggaaa aagctctgct cgaagcccac cgtatcctgc gcagcggcgg
      421 caggtttgct ttctcggtgt gggcgaaacc ggaagagacc attggtttcg gcattgtctt
      481 gcgcgccgtc gagccatggc gagccgcgcg tcgagctgcc cgaagggccg ccgttctttc
      541 gttacagcga tcccgatgag tgtacgcagg gcttgattgt cgccggcttc aagtcgcccg
      601 ctgtgaataa agttaaacag ctctggcgtt tgccggccgg tgatggtctg tttaacgcca
      661 tgaaagatag caccgtgcgc acggcggggc tcctgcgcgc gcaaaagccg gcgatattgg
      721 aaaagatccg tgacgaaatg cgcggcgcat tggccaagta caccaaaggg aaagtagtcg
      781 aattgccgat gccggcgtgg gtggcttcgg cggttaagtc ttaactcgtt caatcgcttc
      841 gctcagttca agccgttcaa atcgttcaag tcgtctcggc cattcggagg ttcgtcgtaa
      901 aggtaggcgt ggttcgatcc ggaaaacgat ttgaacggct tgaacatatt gaacgattgc
      961 aacgtgtttt tctttttacg gtccgtgatg ggtcgccagc gggctcgtgt cggtcatctc
     1021 gatcattttg cgcgccaact gttcggtcag ttcttggcgc aagggttgag cgccgggctc
     1081 attccaaaga ttgtcgagct catgtggatc ggcggcgaaa tcgtagagtt cgccccaacc
     1141 gacgccttcg tagatcgtca agcggtgttg ctgggtgatc aggctgcggg cgcggaagtt
     1201 attcgccaat cccatatagc cgcgccgctg gtgctcttcg atgagcattg actcgtggcc
     1261 ggtcatgccg ccgtcgaggg ccggaattaa actttttccc tgcatgccgt tatgacccgc
     1321 cagcctagcc cgctgcaaaa tcgtcggcgc tagatcgatc gtgccgcata agccggcatt
     1381 gagcttgcca ggcgtttcga tctgcgggtc gctctagatg cacggtaccc gcaccaggcc
     1441 gcggtaatgc agcgcgcctt tcaacaacag ctgatgatcg cccatgaagt cgccatgatc
     1501 gctggtgaaa atcactaccg tgtcgtcgtc gaggcgtagg gtttttaacc aggccaaaat
     1561 gctgccgatg gcatcgtcga tcatcgtgat catgccataa gtgagcgcgg tggcttcacg
     1621 aacttctcgt tcggtgacgg caaaggtgcg ctgcccgtcc ttgttcgcct cctgggcggt
     1681 acgctcttgg tagaggcggc gcaggtgcgg cacgatcggt cgctcaccgg gattgaacga
     1741 cggcggcaag gggatctctg ccggattgta catgtcccaa tagcgccccg gcggcgtgaa
     1801 cggatggtgt gggtcgggaa acgagcattg caggaaaaac ggcttggcgc ggtcgctgcg
     1861 ggaatagttt tctaaatact tgatggtccg ctcggcgacg taggcggagg gatagagctc
     1921 ttcgggaatc gccgtgcgcc aagcctgcgg tgcgatataa ttgttccccg gcagctgatt
     1981 cttgcgcccg cgcagtgcat cgccattggc agcgcgctgc ttgagccagc gatcgtaatg
     2041 gccgactact tcgtcgccat ggccgacggc gagctcgact tggctaaagc cgtagtaggg
     2101 caggctaagc tcgaagttgg ggtcgctttg ccaagtggcg cgcagttcct gatcgtaacg
     2161 gccatggtta agccaactct tatcggcctc gcgcaaatgc tccggcggct gaactctgtc
     2221 ggggtccgcc tctggcatgc cgatggtcgg gcgtgcgccg ctgatacttt gcaggtggca
     2281 tttgccgatc agcgcagtat cgtagcccgc tgcccgcagg atctcgacga aggtagtcgc
     2341 ggtcagcgcc agcgggatgc cgttttggcg cgcgccgtgc agcgacggca tgcgcccggt
     2401 catgaatgtc gcgcgattgg gcatgcagat cggcgtggcg acatagaaat tgtcaaagcg
     2461 ggttcccgct tgcgcgagcc gatcgatgtt cggggttttg acaatcggat taccgtagca
     2521 gcccagatga tcggcacggt gctggtcggt gatgatgaaa agaaagttcg gcgctctatc
     2581 catgggtgat cctcgacatc gcctgtcttt atcatatcgc tgccgctgtg caattgttaa
     2641 aaccccgccg atctttgcta ccagccgggg aattgtagta gaagcggata aggacaatga
     2701 cgatgatcga cgccgccgtg ctcattcccg tttatcgttc gcagcaaggc gaactgcata
     2761 tcgtcatgat cctgcgcaat cccggcggcg tgcacggcgg tcaggtcgcc tttcccggcg
     2821 gcaagcacga tccggtagat gacaccatgc tcgataccgc gttgcgcgaa gcgcgtgaag
     2881 agctcggttt ggtggtgccg cgcgaagata tcttggccga gttgccgatg gagcggacgc
     2941 gcaccacggg ctatcgggtt ttcccctatg tggcgcgcat cacgctccct gaccggtggc
     3001 agatcgctga gcgtgagatt gccgcgatca tcgatgtccg gctcaacgat ctcgctggtc
     3061 ccggcgccca cgacaagatg atcgaccgct tcccgacctg gcggaaggcc gagcaggttt
     3121 cgtattatcg aattggcgac catcggctct ggggattgtc ctatcggatc ttacatccgg
     3181 tcatcccgcg tctggttggc ggcgattgga atgtgtgatg gaaagattgg taaggggtga
     3241 ggggtaaagg gtaaggcgtc cggtcagata cgctttaccc ctcacccttt accctttacg
     3301 ctcgtgtgct cggagctgag atattttgaa aattaagaaa agtggaccgt aatcaaaaag
     3361 gagaagaaca atggacttca atttacagcc ggatagcccg gcgatcagcg catttcgcca
     3421 agaggtgcgc gcctggttgg cggaaaatat gaagggcagc gagcatctgc gctggtcagg
     3481 caactggtcg acccgggaaa acgacgagga atataaattc cgccgcggct tggcgggtaa
     3541 gttaggcgcg aaaaggtggc ttttccccac ctatcccgag aaatatggcg gcggcggcat
     3601 gagtctcgat caccagttcg ttctcgaaac cgagatcgat cgttatggtc tgtcgctggg
     3661 atcggttttc tataccctgt cgcgcttggt ggcgccggcc gtgatgaagt tcggcaccga
     3721 ggagcaaaag gccgagtttc tgccgccgat gatgcgtggc gaactggcgg tatggcaagt
     3781 actcacggaa cctcaaggcg gcagcgacgt cgccaactgc cagaccaagg cgatccgcga
     3841 cggcgacgat tacatcgtca acggtcaaaa agtc
//
LOCUS       DATIRS010001228         3748 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1371414, whole genome shotgun sequence.
ACCESSION   DATIRS010001228 DATIRS010000000
VERSION     DATIRS010001228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3748)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3748)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3748
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1371414"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            266..1006
                     /locus_tag="VLM90_15790"
     CDS             266..1006
                     /locus_tag="VLM90_15790"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSQ14488.1"
                     /translation="MTGGAGGIGGAVVRALTQAGVAGVVVNYRKSSKEAEALAAQIEQ
                     GGVKARAVQADVQSDPQVRAMMQTIQNRFGRLDIVVNNAGVTHWVKLPDLEGLTDPIW
                     DEILDVNVKGAFRCARAAQKLLEANHGMIVNVSSISGVLAPSTMSSLAYGTAKAALIY
                     MTKGLAVAMAPKVRVNCVAPAFTDTPWMSQHFGADYQQVITKASSGYPLQRIATPDDI
                     AAAILGLITGGDFVTGQTLLVDGGLSLS"
     gene            1069..1737
                     /locus_tag="VLM90_15795"
     CDS             1069..1737
                     /locus_tag="VLM90_15795"
                     /inference="COORDINATES: protein motif:HMM:TIGR01182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HSQ14489.1"
                     /translation="MDRIKLVAELHASRLVAVVRSTSPEDALALANVAADGGIKFVEI
                     TFSVPGALDVIKELTRRGGIHVGAGTVLAPQQAERAMGVGAEFIVSPSLELNLVGLCH
                     TANIACFPGAATPTEIIAAQRAHADLVKIFPADLAGGPYFIRQMQGPFPDARFMVSGG
                     VSLKNLQEYVQTGVTGICLGSAYLGGLLAAKGKKLFVKEMQQFVKLVAQAQSKNIKAR
                     KRGK"
     gene            1734..2723
                     /locus_tag="VLM90_15800"
     CDS             1734..2723
                     /locus_tag="VLM90_15800"
                     /inference="COORDINATES: protein motif:HMM:NF024376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhnD/SsuA/transferrin family substrate-binding
                     protein"
                     /protein_id="HSQ14490.1"
                     /translation="MKNLHLTLACEDYDRMRALKDGIVKPEGIELNYLVMPVEEIFWR
                     MMKYEEFDVSELSMGAFLTAASRGRRPFVAIPVFPSRTFRHRCIFVNTDSGIKSIQDL
                     RGRRMGVPEYSMTAAVWLRGMFEHEYGVPPSAIHWVQAGEEHPGRKDRVDFEMPAGVT
                     MESRPDTTLNVMIENGEVDAMMSPRMPTCFLQGSPKVQRMFPNYRQVEMDYFKTTGLF
                     PIMHVLVIKRSIYEKEPWVAQTLYKAFCQSKDICMRDLYDTNILRVALPWTSAEFEDT
                     TALMTTDYWPYGLEPNRKNLETLNGYLLEQGLTKQKLVLDELFARETVEAFKI"
     gene            2794..>3748
                     /locus_tag="VLM90_15805"
     CDS             2794..>3748
                     /locus_tag="VLM90_15805"
                     /inference="COORDINATES: protein motif:HMM:NF019912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14491.1"
                     /translation="MGEVLPTAESDSGTAPRGSANIRHLCRMELEGGGQIVLDGKYAY
                     VGHQHRVQGTTILDIGDPRKPKIVSTLMPNHPWSHSHKVRVVGDLMVVNSEFERGPGQ
                     RGDYPDGGFRIYDIKDRTTPKLITFVKTHGKGVHRFDCDENYAYISTEMEGFVGNILV
                     IYDIRNPSKPEEVSRWWMKGQNVAAGDAPHPKHAEHRLHHAMRCGTEMYAGCWMSGIA
                     IIDVSDIGAPRTLSRFEYDPPCPEPTHTFLKVPHSIGGKRIAVSTEEERTHRGADTGK
                     PHAPLRTWDVSVPTQPELLHTYYLPESATPYPADKVRFGTHQ"
BASE COUNT          793 a         1012 c         1161 g          782 t
ORIGIN      
        1 atcgaaggtt atgtaacggc ggcagctgct gagaagcagt acggcgttgc ggttacgtat
       61 agtggcctgg ctgatgcgtt ggtcaagtta ccggaggagt ggcaggtcga tgtggcgcgg
      121 acggcggcgc tgcgaaggga caagtaattc cagatttcag attccaaatt ccatattgtc
      181 gatccaacca atttggaata tggaattttg aatctggaat tgcgagcgaa gcgaacttct
      241 ggatctgaga ggtagagtcg cattagtgac cggtggcgcc ggcggaatcg gcggcgcggt
      301 ggtgcgcgcg ctgacgcaag ccggtgtcgc gggcgtcgta gtaaactacc ggaaatcgag
      361 taaggaagct gaagcactgg cggcgcagat cgagcagggc ggcgtcaaag cgcgggctgt
      421 gcaagccgat gtgcaaagcg atccgcaggt gcgggcgatg atgcagacca ttcagaatcg
      481 cttcggccgg ctcgatattg tcgtcaacaa cgccggcgtg actcattggg ttaagctgcc
      541 ggatctcgaa gggctcaccg atccgatctg ggatgagatt ctcgacgtca acgtcaaagg
      601 cgcgtttcgt tgtgcccgcg ccgcgcagaa gctgcttgaa gccaatcacg gcatgatcgt
      661 caatgtatcg tcgatctccg gcgtgctggc gccgtcgacg atgtcgtcct tggcctacgg
      721 cacggccaag gcggcgttga tttatatgac caaggggcta gccgtggcga tggcccccaa
      781 ggtgcgcgtc aactgtgtcg caccggcgtt caccgacacg ccttggatga gccagcactt
      841 cggcgccgat taccagcagg tgattaccaa ggcatcgtcg ggttatccgc tgcagcgcat
      901 cgccacgccg gacgacatcg ctgcggcaat tctcggattg atcacgggag gagactttgt
      961 caccgggcag actttgttag tggatggcgg tttgagtctc agttgaaatt ccggtcgagg
     1021 tattgggttc ttgtaaggcg atcggcctga tcgcacgacc aacctattat ggacagaata
     1081 aaactcgttg cagaattaca cgccagccgc ttagtcgcag tcgtgcgttc gacaagtcca
     1141 gaggatgccc tcgctctcgc taacgtcgct gccgatggcg gtatcaagtt tgtcgagatt
     1201 actttcagcg tgccgggcgc gctggatgta atcaaagaat taacccggcg cggtggtatt
     1261 catgtcggtg ctggaacggt tctggcgccg cagcaggcgg agcgggcgat gggtgtcggc
     1321 gctgagttca tcgtctcgcc gtcgttggag ctgaacctgg tcggcctgtg tcatacggcg
     1381 aacatcgcct gctttcccgg cgcggcgacg ccgacggaga ttatcgcggc gcagcgggcg
     1441 catgccgact tggtgaagat tttcccggcg gatttggcag gcgggccgta tttcatccgt
     1501 cagatgcagg gaccctttcc tgacgcgcgt tttatggtat cgggcggcgt gagtttaaag
     1561 aaccttcaag aatatgttca aaccggcgtc accggaattt gtctcggcag cgcctatctc
     1621 ggcggcttgc tggcggcaaa gggtaagaag ctattcgtca aagagatgca gcaattcgtc
     1681 aagctggtcg cccaggcgca gagcaagaat atcaaagcaa gaaagcgcgg caaatgaaaa
     1741 atctccatct cacgctggca tgcgaagact acgaccgcat gcgcgcgctc aaagacggca
     1801 tcgtcaagcc cgaaggcatc gagcttaact atctggtcat gccggtggag gaaatcttct
     1861 ggcgcatgat gaagtatgaa gagttcgatg tttccgaact gtccatgggc gcgtttttga
     1921 ccgcggcgtc gcgcggccgc cggcccttcg tggcgattcc cgtgtttccg tcgcggactt
     1981 ttcgccatcg ctgtatattc gtcaataccg attcgggtat caaatcgatt caagacctgc
     2041 gcggccggcg catgggcgtg ccggagtatt ccatgaccgc ggcggtgtgg ctgcgcggca
     2101 tgttcgagca tgagtatggc gtgccgccat cggcgattca ctgggtgcag gcgggcgagg
     2161 agcacccggg tcgcaaagat cgtgtcgact tcgaaatgcc ggcgggagtg acgatggaaa
     2221 gccgcccgga cacgacgctc aacgtcatga tcgaaaacgg cgaggtcgac gccatgatgt
     2281 cgccgcgcat gccgacctgt tttctccagg gatcgccgaa agtgcagcgc atgtttccca
     2341 attaccggca agtcgagatg gactatttca aaaccaccgg cctgttcccg atcatgcatg
     2401 tgctggtgat caaacggtcg atctacgaga aagaaccgtg ggtagcacag acgctgtaca
     2461 aagcgttttg ccagtcgaaa gatatctgca tgcgcgatct ctacgacacc aatattctgc
     2521 gcgtcgcgct gccgtggact tccgcggagt tcgaagatac aaccgcgttg atgactacgg
     2581 actactggcc ctatgggctg gagcccaaca gaaagaatct ggagacttta aacggctatc
     2641 ttttagagca aggcttgacc aagcaaaagc tcgtattgga cgagctgttc gcccgcgaga
     2701 cggtggaagc gttcaagatt tagcaaggct ccgcttcgtt ggggttcaat tactggcgat
     2761 tacagataac gatattatta tccgaggtgc aatatgggcg aagttctacc cacagcagaa
     2821 agcgatagcg gcacggcgcc gcgcgggtcg gcgaatattc gtcatctctg ccggatggag
     2881 cttgagggtg gcgggcagat tgtccttgac gggaaatatg cctatgtcgg ccatcaacac
     2941 cgggtccagg ggaccacgat cctcgatatc ggcgatccgc gcaaaccgaa gatcgtcagc
     3001 acgctgatgc ccaaccaccc gtggtcgcac tcgcacaagg tgcgggtggt cggcgacctg
     3061 atggtggtca attccgagtt cgagcgcggc cccggtcagc gcggcgacta tcccgatggc
     3121 ggctttcgca tctacgacat caaagatcgg acgactccga agctcatcac ctttgtcaaa
     3181 acccatggca agggggtgca tcgtttcgat tgcgatgaga actacgctta tatctcgact
     3241 gaaatggagg gtttcgtcgg caatatttta gtcatctacg atattcgcaa tccctcgaag
     3301 ccggaggagg tttcgcgctg gtggatgaag ggacagaacg tggccgctgg cgacgcgccg
     3361 cacccgaagc acgccgagca tcgcctgcat catgcgatgc gctgcggcac cgagatgtac
     3421 gccggttgtt ggatgtccgg tatcgcgatc atcgacgtga gtgatattgg cgccccgcgc
     3481 acgctgtcgc gctttgagta tgatccgcct tgccccgagc cgacccacac ctttctcaaa
     3541 gtgccgcatt cgatcggcgg caagcgcatc gcggtttcga cggaggagga acgcacgcat
     3601 cggggcgccg ataccggcaa gccgcatgcg ccgctacgca cctgggatgt cagcgttccg
     3661 acccagcctg aactgctcca cacgtattac ctgccggagt cggcaacgcc ttatccggct
     3721 gacaaagtgc gcttcggcac gcatcaat
//
LOCUS       DATIRS010001229         2902 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_977669, whole genome shotgun sequence.
ACCESSION   DATIRS010001229 DATIRS010000000
VERSION     DATIRS010001229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2902)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2902)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2902
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_977669"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..231)
                     /locus_tag="VLM90_15810"
     CDS             complement(<1..231)
                     /locus_tag="VLM90_15810"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HSQ14492.1"
                     /translation="MEKKAALVIVDVQNDFCPGGALAVAEGDRVALAINRYVERFAAA
                     GAPIFATRDWHPAQTSHFKDFGGIWPVHCVQNT"
     gene            350..1072
                     /locus_tag="VLM90_15815"
     CDS             350..1072
                     /locus_tag="VLM90_15815"
                     /inference="COORDINATES: protein motif:HMM:TIGR02252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HSQ14493.1"
                     /translation="MPSEIPSDARIKAVFFDAAGTLIKPARRVGESYAAIAAKYGMAV
                     TPAALFERFRICFDGAPPLAFPGAAAAEIEPLERLWWRQLVAQVFEPWGEFAEFDDFF
                     EELFAYFARADAWLLYPEVVETLAALKQRGLILAVISNFDSRLVRILDGLNVGASFEH
                     VFISSAVGYAKPQARIFDLALTRFGLTPGQALHIGDSETNDLAGARNAGVRVLLVDRD
                     LAAGAAPPDRVQSLRQLLDHLD"
     gene            1150..1863
                     /locus_tag="VLM90_15820"
     CDS             1150..1863
                     /locus_tag="VLM90_15820"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HSQ14494.1"
                     /translation="MVASTWQRSESDNNPMPLYVSVPDGAGPFPALVVIHHQTGVDEF
                     IQGMAQRLAGAGYVAAVPSLYHRDGPDCQDDPRSRSQRLGDRRVMNDVEATVSYLQRD
                     SAVDGQRIGVIGFCMGGRVVYLLAATHPAFKAAVTFYPGNTGRAWGRDIPTPFERSAD
                     IQCPIQGHFGDDDKNPSPEDRQNLAAELAKHNKTHEFYAYSGAGHAFMDNTKESFRAD
                     AEAAAWPRTLAFLRRHLNA"
     gene            1924..2583
                     /locus_tag="VLM90_15825"
     CDS             1924..2583
                     /locus_tag="VLM90_15825"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HSQ14495.1"
                     /translation="MKSKDAEKKDAVAAAIVEERLRLSRELHDRALQLLTSARLRLEN
                     CHYHQNSDAALEKELRVIEDNLDHAITEIRNILAETQTPEQLQAGSLERRLKEELSIF
                     SARNGLQIDLHCAVDAHDLPIAIEKELYFALREGVLNAVRHARASEIHLSLARSQSAY
                     RATLSDNGVGFSAADTEGSNHYGLKGMKERIVKLGGTLDLQTAPGQGTRIEIEIPYSG
                     D"
     gene            complement(2604..>2902)
                     /locus_tag="VLM90_15830"
     CDS             complement(2604..>2902)
                     /locus_tag="VLM90_15830"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HSQ14496.1"
                     /translation="GFVLFFHNFSTFVGRPGIYIEDLFVEETYRRRGFGRALLAHVAK
                     LAVARDCGRLEWSVLDWNEPAVNFYQKLGAMPMNEWTVFRVTGEKLNQLAARQG"
BASE COUNT          635 a          922 c          804 g          541 t
ORIGIN      
        1 cgtgttttgc acgcagtgta ccggccagat gccgccgaag tctttgaaat ggctcgtctg
       61 cgccggatgc cagtcgcggg tggcgaagat cggcgctccc gccgcggcaa aacgctcgac
      121 gtaacgattg atcgctaaag cgacccgatc gccttccgcc acggcgagcg cccccccggg
      181 acaaaaatcg ttctgcacgt cgacaatgac taaagcggcc tttttctcca tcgatttcga
      241 ttataaagga tggtacggtc catgcaatcg agctttgcgc catacgcctt gcccgacagt
      301 aaccgtatga aaaattgaat tctgcaatcc ccttttttaa atttgaccta tgccatctga
      361 gattccgagc gatgcgagga tcaaagcggt tttcttcgat gccgcaggca cgctgatcaa
      421 gccggcgcgc cgcgtcggcg aaagctatgc cgcgattgcc gccaagtacg gcatggcggt
      481 gacgccggcg gcactgttcg agcgttttcg catttgcttc gacggcgcgc cgccactcgc
      541 ctttcccgga gccgccgcag cagagatcga gccgcttgaa cgcctatggt ggaggcagtt
      601 ggtggcgcaa gtcttcgaac cctggggtga gttcgcggaa ttcgatgact tcttcgaaga
      661 actattcgcc tacttcgccc gtgccgacgc ctggctgctt tatccggaag tcgtcgagac
      721 cctggccgcg cttaaacagc gcggtttgat cctcgcggtg atttccaact ttgattcacg
      781 tctggtgcgg atactcgacg ggctcaatgt cggcgcgagc ttcgaacatg tctttatctc
      841 cagcgcggtt ggctatgcca agccgcaagc aagaatcttc gatctcgctc tgacgagatt
      901 tggcttgacc ccagggcaag cgctccatat cggcgacagc gagaccaacg atctcgcagg
      961 ggcgcgaaac gccggcgtac gcgtgctttt agtcgatcgc gatctcgctg ccggtgccgc
     1021 gccgccggat cgcgtccaaa gcctgcggca acttctcgac catctcgatt aacaactcag
     1081 ggacgtgaag gtagcttgac tccacgccct ggctacgtta cacggcaact aatttcgagg
     1141 aaccgaatca tggtagcttc cacttggcaa cggtccgaat ccgacaacaa tccgatgccg
     1201 ctctatgtga gcgtacccga cggggccggc ccctttcccg ccctggtcgt cattcaccat
     1261 cagaccggcg tcgacgaatt catacagggg atggcgcaaa gactcgccgg cgccggttac
     1321 gtcgccgcgg tgccgagcct gtatcatcgc gacggtccgg actgccaaga cgacccacgc
     1381 agccgcagcc agcggctggg cgaccggcgc gtcatgaacg atgtcgaggc cacggtcagc
     1441 tacctccaac gcgacagcgc cgtcgatggc caacggatcg gtgtcatcgg cttttgtatg
     1501 ggcggccgag tcgtctatct gctggcggca acccacccgg ccttcaaagc ggctgtaacc
     1561 ttttatccgg gcaacaccgg ccgtgcctgg ggccgtgaca ttccgactcc cttcgagcgc
     1621 agcgcggata tacaatgccc gatccaaggc cacttcggcg acgacgacaa aaacccctcg
     1681 cccgaagacc gccagaatct cgccgccgag ctggccaagc ataacaaaac ccatgagttc
     1741 tacgcctatt ccggcgccgg ccatgcgttt atggacaaca cgaaagagag ctttcgcgcc
     1801 gacgccgaag ccgccgcctg gccgcgcacg ctggcgtttt tgcgccgcca tctgaacgcg
     1861 tgaggggtat ctgaatacag tttgccaaac tgatggctgt tggagcacga agcacagtcc
     1921 aacatgaagt caaaagacgc ggaaaagaaa gacgccgttg ccgcagcgat cgtggaagag
     1981 cgcctaaggc tatcccgcga gctccacgac cgcgccttac agctactcac cagtgcccgt
     2041 ttgcgccttg agaactgcca ctaccatcag aacagcgatg cggctctgga aaaagaactc
     2101 cgggtcatcg aagataacct cgaccacgcg attacggaaa tccgcaatat cctcgccgag
     2161 acccaaaccc cggaacaatt gcaggccggc tcgttggagc gccggctcaa ggaagagctc
     2221 agtattttta gcgcgcgcaa tggcttacaa atcgacttgc attgcgcggt cgacgcccat
     2281 gacctgccga tcgccatcga aaaagaactc tacttcgcct tgcgcgaagg cgtgctcaac
     2341 gccgtacgcc acgcgcgcgc gtcggagatc catttatcac tggcgcgtag tcagtccgcc
     2401 tatcgagcga cgctgagcga caacggcgtc ggcttcagcg ccgccgacac cgaaggcagc
     2461 aaccactacg gactcaaagg catgaaagaa cggattgtaa aactcggtgg caccctcgac
     2521 ctccaaaccg ccccaggcca agggacgcgc atcgagatcg agattcccta ttccggcgat
     2581 taggacatag aacgcggccg ggcttaaccc tggcgcgcgg cgagctgatt aagtttctcg
     2641 ccagtgacgc gaaacaccgt ccactcgttc atcggcatgg caccgagctt ttggtaaaaa
     2701 ttcaccgctg gctcattcca gtccaacacc gaccactcga gccggccgca atcgcgcgcc
     2761 accgccagct tagcgacatg agccagcagc gcacggccga aaccgcgccg ccgataggtt
     2821 tcttcgacga acaggtcctc aatgtaaatg cccggccggc cgacaaaggt cgagaaattg
     2881 tgaaagaata ggacgaatcc aa
//
LOCUS       DATIRS010001230         1625 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_92539, whole genome shotgun sequence.
ACCESSION   DATIRS010001230 DATIRS010000000
VERSION     DATIRS010001230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1625
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92539"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..299
                     /locus_tag="VLM90_15835"
     CDS             <1..299
                     /locus_tag="VLM90_15835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14497.1"
                     /translation="DAEHVGYEARPQQNKYGDGRRDRRKHGNTLPDRRVTLADLVTGK
                     AKGRSSADQITYSERVNLQGAQFHAVAGKFYELAKEAGLGREIPTEWFLQDIRD"
     gene            353..1396
                     /locus_tag="VLM90_15840"
     CDS             353..1396
                     /locus_tag="VLM90_15840"
                     /inference="COORDINATES: protein motif:HMM:NF014476.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine cyclodeaminase family protein"
                     /protein_id="HSQ14498.1"
                     /translation="MALFLANEDVQQLLTMGDYIDAVEKAYHELGMGRAWNNPRIHTY
                     GKAQSGATHFLKVFTGTVPALGYSILRIDSTMERNENGHETSRKIGNRNMGWLLLFSV
                     ETGELEAIIEDRALQRMRVGAMTGIAAKYLAKSDSRTVGIFGSGTQAGPQLEALCSVM
                     KIQRIKVYSPTVKNRENFAAKMTQALGTEVTAVDSPRQTVTGCDIVVVATNSNEPVFD
                     GRWLEAGSYVSSIVNSDKVLRRRDLDDESFRRAALIVVSARDQIKNDEPIWLTEGLER
                     GAVSWDRVWEIGELVCGKAPRRSDDQQITILKNNGLSVQFAGVGAAVMQRAKERGLGK
                     ELPAFMFEKAYRT"
BASE COUNT          399 a          484 c          456 g          286 t
ORIGIN      
        1 ccgacgccga gcatgtcggc tatgaggcgc gcccgcagca aaataaatat ggcgatggcc
       61 gccgcgatcg gcgcaagcac ggcaacaccc tgccggatcg gcgcgtgacg cttgccgacc
      121 tggttaccgg caaggcgaaa gggcgcagct cggcggatca gattacttac tccgagcgcg
      181 tcaatctgca aggcgcccag ttccacgcgg tggcgggcaa gttctatgaa ctcgccaagg
      241 aagccggcct cggccgtgag atcccgaccg aatggtttct gcaagacatt cgcgattgac
      301 agctgttcct aaagttccag tcgttcaatt tgaccgcgaa gggaaatcga cgatggcgct
      361 atttctcgca aacgaagacg tccagcaact tttaaccatg ggcgattaca tagacgccgt
      421 ggagaaagcc tatcacgaac tcggcatggg acgagcgtgg aacaatccgc gcatccatac
      481 ctacggaaag gcgcaaagcg gcgcaaccca ttttctcaag gttttcaccg gcaccgtgcc
      541 ggccctgggc tattcgattc tgcgcatcga ctcgaccatg gagcgcaacg aaaacggcca
      601 cgaaaccagc cgcaaaatcg gcaaccgcaa catgggctgg ctgctgctat tttcagtgga
      661 aaccggcgaa ctcgaagcga tcatcgaaga tcgcgcgctg caacgcatgc gcgttggcgc
      721 gatgaccggc atcgccgcca agtatcttgc caagagcgac agccgaaccg tcggaatttt
      781 cggctccggc acccaggccg ggccgcaact ggaagcactc tgcagcgtca tgaaaatcca
      841 gcgcatcaaa gtctacagcc cgacggtaaa gaaccgtgaa aacttcgccg ccaagatgac
      901 ccaagcgctt ggcaccgagg tcactgcggt ggattcaccg cggcaaacgg tcaccggctg
      961 cgatattgtc gtggtcgcga ccaactcgaa cgaaccggtc ttcgacggcc gctggttgga
     1021 agcaggcagc tatgtaagct ccatcgtcaa cagcgataag gtgctgcgcc gccgcgacct
     1081 cgacgacgaa agtttccgcc gcgccgcgct gatcgtcgtc agcgcgagag accagatcaa
     1141 aaacgacgaa ccgatctggc tgaccgaagg cttggaacgt ggcgcggtga gttgggacag
     1201 agtttgggaa atcggcgaac tggtctgcgg caaagcaccg cggcgaagcg acgaccaaca
     1261 aatcaccatc ctgaaaaaca acggactcag cgttcaattc gccggtgtcg gcgccgcggt
     1321 gatgcaacga gccaaagaac gcgggctcgg caaagagctg ccggcgttta tgttcgaaaa
     1381 agcttaccgg acatgaaccc ctgagtcaga ccatgggaaa tctgcggtca tgcctctggt
     1441 aataattaac ttattcacgt gcggcgatgt ctcccacacg ttgcatccaa caactcgatt
     1501 aatctaatca actgttggcc tggctgccgt atcagactga aattatcggg tcgcacctga
     1561 ttgcgaatca acctgcgcca acagaacctg tcgccagaac ttctcgctga cagctaccta
     1621 ttgcc
//
LOCUS       DATIRS010001231         2407 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_486771, whole genome shotgun sequence.
ACCESSION   DATIRS010001231 DATIRS010000000
VERSION     DATIRS010001231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2407
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_486771"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..804
                     /locus_tag="VLM90_15845"
     CDS             <1..804
                     /locus_tag="VLM90_15845"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HSQ14499.1"
                     /translation="HSSGLAAWKPYHEEIVKMEKAGRINFFVSRAAKSYVLEQIHRDK
                     PLSAPGAQALYSDLGFMMLAEAVETITSNGLDRFCQERIFKPLGLRSTGFVDLTELRK
                     RRLQPVEAMIAPTENCPWRKKILCGEVHDDNAYAMGGVCGHAGLFSSARDVHTFLLRM
                     NRCLHGKDDFLPQSVVQEFLTKDISVPNSTYALGWDTPSPANSSSGTLFSPRSVGHLG
                     FTGCSMWWDLEKNCHVILLTNRVHPSRKNEKIRDFRPQVHDLIMKALFP"
     gene            801..2216
                     /gene="mpl"
                     /locus_tag="VLM90_15850"
     CDS             801..2216
                     /gene="mpl"
                     /locus_tag="VLM90_15850"
                     /EC_number="6.3.2.45"
                     /inference="COORDINATES: protein motif:HMM:TIGR01081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HSQ14500.1"
                     /translation="MSDLPPAGSHIHLTAICGVGMASLAGLLKARGYRVTGSDQNIYP
                     PMSTYLADTGINVLAGFSAEHLVPRPDLVVIGNAVSRNNPEAEAVLNQGIDYISFPQA
                     LGRFLIGARSSLVVAGTHGKTTTCALAAWVLTSAGLDPGFFVGGVPLNFASGWNAGTG
                     EHVVLEGDEYDSAFFDKGPKFLHYRPRHVILTSVEFDHADIYRDLDHVKSAFAKLVDI
                     IPADGSLVVCSDYPDAVTLSRAVKAPSVTYGESGDWTAQNVKFDQGRSFFEPCFKGRS
                     EGLIEAAVIGLHNVKNALAVYAMGRTMGIAGAKLRDGFSTFKGVKRRQEVRGEKRGVT
                     VIDDFAHHPTAVRETIDAVRGAYAGRRLWAIFEPRSNTSKRNVFANEFAAALALADQT
                     IVASVYQPERVPEDQRLSVQDLVGKINRIGGAGRALTIADSAAIAEHVARHSRAGDVL
                     LVMSNGGFDAVHDKILQALAG"
     gene            complement(2205..>2407)
                     /locus_tag="VLM90_15855"
     CDS             complement(2205..>2407)
                     /locus_tag="VLM90_15855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14501.1"
                     /translation="LCLVIYIVYSALKPLLRGKKTADRARLGEEMVLDPQCQAYVAKS
                     AAVARQGKFFCSEECAQRYLTG"
BASE COUNT          480 a          707 c          711 g          509 t
ORIGIN      
        1 cactcgtcgg gtctggcggc gtggaaaccc taccatgaag aaatcgtcaa aatggaaaag
       61 gcggggcgga tcaacttctt cgtcagccgc gccgcgaaaa gttatgtgtt ggagcaaatt
      121 catcgtgaca agccgctgag cgcgcccggc gcccaggcgc tctacagcga tctcggattc
      181 atgatgttgg ccgaagccgt cgaaaccatc accagtaatg ggctcgaccg tttctgccag
      241 gagcgcattt ttaaacctct cggacttcgt tccactggtt ttgtcgatct aaccgagctg
      301 cgcaagcgcc ggcttcaacc ggtcgaagcg atgatcgcgc ccaccgagaa ctgtccgtgg
      361 cgcaagaaaa ttctttgcgg cgaagtccat gacgacaacg cctacgcgat gggcggggtg
      421 tgcggccatg ccgggctttt ctcctcggcg cgcgacgtgc acacttttct cctgcgcatg
      481 aaccgctgtc tgcacggcaa ggacgatttc ttgccgcaat cggtcgtgca agaatttttg
      541 actaaggata tttccgtgcc gaactcgacc tatgctttgg gctgggacac gccgtcgccg
      601 gccaattcgt cgagcggcac gctgttttcg ccccggtcgg tcggccatct cggtttcacc
      661 ggctgctcga tgtggtggga cctcgaaaaa aattgtcatg tcatcctatt gaccaaccgg
      721 gtgcacccaa gccgtaagaa tgaaaagatt cgcgacttcc gtccccaggt acacgacctg
      781 attatgaaag cgcttttccc atgagcgatt tgccccccgc tggtagccat attcatttga
      841 ccgcgatctg tggcgtcggc atggcctccc tggcggggtt gctgaaagcg cgcggctatc
      901 gcgtcaccgg ttcggatcaa aatatttatc cgccgatgag cacctatttg gcggataccg
      961 gcattaacgt gctcgccggc tttagcgccg agcatctcgt gccgcgaccc gatctcgtgg
     1021 tcatcggcaa cgcagtgtcg cgaaataatc ccgaagccga agcagtgttg aaccagggca
     1081 tcgattacat ttcgtttccc caggcgctcg gccgctttct catcggcgca cgcagttcat
     1141 tggtggtcgc cgggacccat gggaagacca ccacctgcgc gttggccgcc tgggtgctga
     1201 ccagcgccgg actcgatccg ggtttctttg tcggcggtgt accgctcaat tttgccagtg
     1261 gctggaacgc cggtacgggc gagcatgtgg tgctcgaagg cgacgagtat gactcggcat
     1321 tttttgacaa ggggccaaag tttcttcact accggccgcg ccatgtcatc ctgaccagcg
     1381 tcgagttcga ccacgccgat atctaccgcg atctcgacca tgtgaagagc gcgtttgcca
     1441 agctggtcga catcattccc gccgatggat cgttggtggt ttgcagcgat tatcctgacg
     1501 cggttacgct gagccgtgcg gtgaaagcgc cgtcggtaac ctatggggag tccggcgatt
     1561 ggaccgccca aaatgtcaag ttcgaccagg ggcgaagctt cttcgaacct tgtttcaagg
     1621 gtcgatccga aggtttgatc gaggcggcgg tcatcggcct gcataacgtc aaaaatgctc
     1681 tggcggtcta cgctatgggc cgaaccatgg gcatcgccgg cgcgaaactc cgcgacggct
     1741 ttagcacttt caaaggggtc aagcggcgcc aagaagtgcg cggtgaaaag cgcggggtaa
     1801 ccgtaatcga cgacttcgcc catcatccga ccgcggtgcg cgaaactatt gacgcggtgc
     1861 gcggtgctta cgccggccgc cggctctggg cgatcttcga gccgcgcagc aataccagta
     1921 aacgcaatgt tttcgcaaat gaattcgccg cggcgttggc actggccgat caaaccatag
     1981 ttgccagcgt ctatcagccc gagagagtgc cggaagacca acgcttatct gtccaagacc
     2041 tagtcggcaa aattaaccgc attggcggtg ctgggcgggc gctgacgatt gccgactcgg
     2101 cggccatcgc tgagcacgtc gcgcgccata gccgggcagg ggacgtgctg ctggtgatgt
     2161 ccaacggcgg cttcgacgcc gtgcatgata agattctcca agccctagcc ggttagatag
     2221 cgctgagcgc attcctcgct gcaaaaaaac tttccctggc gcgccaccgc tgctgatttc
     2281 gccacatagg cttggcattg agggtcgagc accatctcct cgccgaggcg cgcccggtca
     2341 gccgttttct tgccgcggag cagcggcttg agcgccgaat agacgatata gatgacgagg
     2401 caaagaa
//
LOCUS       DATIRS010001232         1954 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_683287, whole genome shotgun sequence.
ACCESSION   DATIRS010001232 DATIRS010000000
VERSION     DATIRS010001232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1954)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1954)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1954
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_683287"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            88..822
                     /locus_tag="VLM90_15860"
     CDS             88..822
                     /locus_tag="VLM90_15860"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HSQ14502.1"
                     /translation="MKLHVLGCGDAFGSGGRNQSGYLVQAANRLFLLDCGPTTLLAMK
                     RAGFDPRCLDVILLSHLHGDHFGGIPFFFIEYLYLKARETPLIIAGPEGTEERVRDLF
                     RIMYGGGANSQEIPPARFQVLHPEESTVVDGIEVFPFQVPHQAHDVSLGLKVSHEGKQ
                     ILFSGDSLWIDRFIEQARGVDLFLCECSFHREQPGMHVNYHALEANLSRLECRKLLLT
                     HLGEEMLRRRGELAVAVAEDGMVIEV"
     gene            complement(840..>1954)
                     /locus_tag="VLM90_15865"
     CDS             complement(840..>1954)
                     /locus_tag="VLM90_15865"
                     /inference="COORDINATES: protein motif:HMM:NF012970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HSQ14503.1"
                     /translation="LMDAATGKILYQKEADLRLPPASTTKVVTAILALESGRKLKDSL
                     TVSKDSTRVPASKLYLRPGQSLTIEELLYGIMLASANDASMVLAEGIGGSVERFTELM
                     SKKAHEIGATNSHFTNPHGLTAPDHYSSARDMAVLFRYAMKSPTFREIIQTKFSSVST
                     TAVVRKKVVPRRISVRNHNRLLWGYDGALGGKTGYTHAAQKCFVGAVQRNGVTLIVSI
                     LGARDQWGDTKRLLEFGFDNYEALKAPQPAGKSAANEQQVGVRLDRIPTVAAKQPQEA
                     NQGRLSEGYVLQVGSFRERDRAESLSRQMAEKGFEVFVEPISVSRSETAYRVRVGPYA
                     ELLAAQETAQEIFTKSGHRALILPLQAVGQERGDPS"
BASE COUNT          382 a          574 c          570 g          428 t
ORIGIN      
        1 tggcatattg aaatatcatg aggtcgccgg acggattgcg gagggagtcg cagagtgtta
       61 gttggacgga aagcaggaca agcaaccatg aaacttcatg ttctcggctg cggcgatgcg
      121 ttcggcagcg gcgggcgtaa tcagagcggt tatctagtcc aggccgccaa ccggttgttt
      181 ctcttggatt gcggcccgac cacactgctg gcgatgaagc gtgccgggtt cgacccgcgc
      241 tgcttggatg tgatccttct cagccatctt cacggcgacc atttcggcgg cattccgttc
      301 ttcttcatcg aatatctcta tctcaaagcg cgcgaaacac ctttgatcat cgccggtccc
      361 gagggcacgg aggaacgggt tcgggatctt ttcaggatca tgtacggagg cggcgcaaac
      421 tcgcaggaga tcccgcccgc tcgatttcaa gtcctgcacc ctgaagaatc gactgttgtg
      481 gacggcatcg aagtattccc cttccaggtg ccgcaccaag cgcacgatgt ttcgctaggt
      541 ttaaaggtct cccacgaagg caaacagatt ctcttctccg gcgattcgct ctggatcgat
      601 cgcttcatcg agcaggcgcg cggcgtcgat ttatttctgt gcgaatgttc tttccacaga
      661 gaacaaccgg gcatgcatgt gaactaccat gccttggaag cgaatctttc gcgcctggaa
      721 tgccgaaaat tactgctcac tcatctaggc gaggaaatgc tccggcggcg cggcgaattg
      781 gctgtggctg tggcggaaga tggaatggtg attgaagtct gagcttaacg cctattccct
      841 caactcgggt cgccgcgctc ttgtcccacc gcctgcagcg gcaggatcag cgcccgatgc
      901 ccactcttgg tgaaaatttc ctgggcggtt tcctgagcag cgagcaattc ggcgtaggga
      961 ccgacgcgca cgcgataagc agtctcgctc cggctaactg aaattggttc gacaaaaacc
     1021 tcgaagccct tttcggccat ctgccgggac agagactcgg ctcggtcgcg ctcgcgaaag
     1081 gagcccacct gtaagacata accttccgac agtctgccct ggttagcttc ctggggctgc
     1141 ttggccgcga cggtcggaat ccggtccaaa cggacgccca cttgttgttc gttcgccgcc
     1201 gacttcccgg ctggctgcgg cgccttgaga gcttcataat tgtcgaagcc aaactccagc
     1261 agccgcttgg tatcgcccca ctggtcgcgc gcgccgagta tcgacacgat caaagttacg
     1321 ccgttccgtt gcaccgcgcc gacaaaacat ttttgcgccg cgtgcgtgta gccggtcttg
     1381 ccgccgaggg cgccgtcata accccacaac agccggttgt ggttgcgcac cgagatgcgc
     1441 cgcggcacga ctttctttcg caccacggcg gtggtgctca ccgagctgaa cttggtctgg
     1501 atgatttccc ggaaggtcgg gcttttcatc gcgtagcgaa acagcaccgc catatcccgc
     1561 gcgctggagt aatggtcggg ggcggtaagc ccgtgcggat tggtaaaatg ggaattggtg
     1621 gcgccgatct catgggcctt cttgctcatc agttcggtga atcgttccac tgagccgccg
     1681 atgccctcgg ccagaaccat gctggcatca ttggcggagg cgagcatgat gccgtagagc
     1741 aactcttcga tggtcagcga ttgaccgggc cgcaggtaga gcttcgacgc cggcacccga
     1801 gtcgagtctt tggagacggt caacgagtct ttcaacttcc gaccactctc caaagccaag
     1861 atcgcggtca cgaccttggt cgtactcgcc ggcggcaaac gcaaatccgc ctctttttgg
     1921 tagagaatct tgccggtggc cgcgtccatg agca
//
LOCUS       DATIRS010001233         1868 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_486851, whole genome shotgun sequence.
ACCESSION   DATIRS010001233 DATIRS010000000
VERSION     DATIRS010001233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1868
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_486851"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1428)
                     /locus_tag="VLM90_15870"
     CDS             complement(<1..1428)
                     /locus_tag="VLM90_15870"
                     /inference="COORDINATES: protein motif:HMM:NF012873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="condensation domain-containing protein"
                     /protein_id="HSQ14504.1"
                     /translation="MDTENFVARLRALDIAVSADGDKLRINAPKGALTGELRATIAAG
                     KAELLAMLRAGAAIAARSIAPRGIGEGAPLSLAQERLWFLAQLAPESSVYNLCRGFRL
                     RGPLHRQALAASLNVIVRRHEVLRSKFCTIDGRPMQLPVAGAGRLLRVRDLRRLSGIR
                     RENDLRRRILLEAETPFDLAVGRLLRARLLQVDDAEHVLLLTTHHLVADAWSMGILVG
                     ELWQLYRAFVAGQASPLAELPIQYGDFAIWQRRRMETAPLQEQLRYWREQLDGVATLD
                     LPTDRSRPVRQSFRGRRYPLNFSPSLTASLNRLAAQENATPFMVLLAAFQLLLHRYSG
                     QDDIVVGSAVSDRPCAECEGLIGFFVNTLVLRGDLSGQPSFRDYLRRLREVCLDAYAH
                     QDIPFEKLVEEFKPRREFHRQPLFQAFFVLQNTPNRWVVPDGIDVEPLEVANATAQYD
                     LSLYLRERGGRLLGYFEYASDLFDAA"
     gene            complement(1425..>1868)
                     /locus_tag="VLM90_15875"
     CDS             complement(1425..>1868)
                     /locus_tag="VLM90_15875"
                     /inference="COORDINATES: protein motif:HMM:NF012759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopantetheine-binding protein"
                     /protein_id="HSQ14505.1"
                     /translation="IDVLRSYLAAKLPDYLVPGYFVLLDRLPLGPNGKLDYNGLPPVM
                     QSCAESSIGALAPRSEVEAKLCEIFSEVLGRERIGVEDNFFRLGGHSLLAAQAALRIK
                     NGFGVGLDLREFLAAPTVAALARSLGNLTVNPVAVGGGEREEIEL"
BASE COUNT          434 a          600 c          537 g          297 t
ORIGIN      
        1 cgcggcgtcg aacagatcgc tggcgtactc gaaataaccg agcagccggc caccgcgctc
       61 gcgcaggtaa agcgacagat cgtactgcgc cgtggcgttc gccacttcca gcggctcgac
      121 atcgattcca tccggcacca cccaacgatt cggcgtgttc tgcaaaacaa agaaagcttg
      181 aaacaacggc tggcgatgga actcccggcg cggcttgaat tcttcgacca gtttctcaaa
      241 cgggatatcc tggtgcgcgt aagcatcgag acatacttcg cgcagccgcc gcaaatagtc
      301 gcgaaagctc ggctggccgc tcagatcacc gcgcaaaacc aaagtgttta cgaaaaaacc
      361 tatcagcccc tcgcattcgg cgcacggccg atcgctaacc gccgaaccga caacgatatc
      421 gtcctggccc gagtaacgat gcagcaggag ctgaaatgcc gctaacagca ccatgaacgg
      481 cgtcgcgttc tcctgcgcag ccaagcgatt gagcgacgcc gttaacgatg gtgaaaaatt
      541 caacgggtag cgtcggccgc gaaaactctg ccgcaccggc cgggaccggt cggtgggcag
      601 atcgagggtt gccacgccat ccaactgttc acgccagtac cgaagctgtt cctgaagcgg
      661 cgccgtctcc atacggcggc gctgccaaat ggcaaagtcg ccatattgga tcggcaattc
      721 agccaagggt gaagcttgtc cggcgacgaa ggcgcggtaa agctgccaaa gttcgccgac
      781 gagaatgccc atggaccaag catcggcgac aaggtgatgg gtggttagaa gcaaaacatg
      841 ctcggcgtcg tcgacttgca gcaagcgcgc gcgcagcagt cgccccaccg ccaaatcaaa
      901 tggagtttcc gcctccagca aaatgcgccg gcgcagatca ttctcacgtc ggatgccgga
      961 cagccggcgc agatctctta cccgcagcag cctcccggcg ccggcaaccg gaagttgcat
     1021 cggtctgcca tcgatcgtgc aaaacttcga acgcagcact tcatgacgcc ggactatcac
     1081 gttgagactc gcggcgagag cctggcgatg gagcggacca cgtagccgga acccgcgaca
     1141 taaattgtaa acggaacttt ccggcgccag ttgcgccaag aaccacaggc gctcttgggc
     1201 caaagacaaa ggcgcgccct cgccgatccc gcgaggcgca atggagcgcg ccgcgatcgc
     1261 agcgccggcg cgaagcatcg ccagcagttc ggctttaccg gcggcgatgg ttgcgcgcag
     1321 ctcacctgtc agcgcgccct tgggcgcatt gatgcgcaac ttatcgccat cggcggatac
     1381 cgcgatatcg agcgcacgca accgcgcgac aaagttctcg gtatctatag ctcgatctcc
     1441 tcgcgctcgc cgccgccgac cgccaccggg ttaacagtca aattgcctag cgagcgcgcc
     1501 aacgccgcca ccgtcggcgc ggcgagaaac tcacgtagat cgaggccgac gccgaagcca
     1561 tttttaatcc gcagcgcggc ttgcgcggcg agcaaagaat ggccgccgag gcgaaagaaa
     1621 ttatcctcga cgccaatccg ctcccggccc aatacctcgg aaaatatctc gcacagcttg
     1681 gcttcgacct cagaacgcgg cgcaagagcc ccaatactcg actcggcgca cgattgcatc
     1741 accggtggca agccattgta gtcgagcttg ccatttggcc ccaggggcag ccggtctaga
     1801 aggacgaaat aacccggcac caggtagtcc ggcagcttgg cggcaagata ggaacgtaaa
     1861 acgtcgat
//
LOCUS       DATIRS010001234         5409 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_977969, whole genome shotgun sequence.
ACCESSION   DATIRS010001234 DATIRS010000000
VERSION     DATIRS010001234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 5409)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5409)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5409
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_977969"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..279)
                     /locus_tag="VLM90_15880"
     CDS             complement(<1..279)
                     /locus_tag="VLM90_15880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14506.1"
                     /translation="MSSEVTALLASIAFALFAVYGWLGLRHSTPLTATIVSLAARTIT
                     LGVAVILFGGVPGFAMAALVVFVILGVMQTGISLLTFIGLQKIGTSRSQ"
     gene            426..1970
                     /locus_tag="VLM90_15885"
     CDS             426..1970
                     /locus_tag="VLM90_15885"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HSQ14507.1"
                     /translation="MRRTVTGIFIVLLFALAARQASAQDQIRDLVVKIHAVQHAPDLL
                     RPWAKNSPQQVKGSGVVIDGRRILTNAHVVKHASQIYVQPNQSASHISARIEAITPGM
                     DLAILKLDDESFFDKRGALPFAQELPRVKDNINVYGYPTGGTELSVTQGIVSRIEYTD
                     YYYQATGLRIQVDAALNFGNSGGPAVTDGKLVGLVFSLIQNAQNIGYLIPVEEIQHFL
                     TDIKDGVYDGKPQTHDLIQTVENDALRQRLGLPKGINGVMVSQPYRDDSNYPLKEWDV
                     ITKVGDTPIDSDGKVAIRYDLRLSASYLVQKHAKNGSLPLTVFRAGKLISIDLPVRSQ
                     RELVIPYLMDASPRYFIFGPFVFSQTTQDYLERLGNQRPTSFGRRPSPLVTRRQDRPA
                     FEDEELIVVASPLFPDRITKGYDDPNRSVLSEINGVPVRNMRHLVELLRDNRAEQLSF
                     KFASSGVLTHETMVFNRADLLNATGKILEENGIRYPYSPDLRAVWEAAPTGAKSAQAT
                     CCGLTQ"
     gene            2332..3015
                     /locus_tag="VLM90_15890"
     CDS             2332..3015
                     /locus_tag="VLM90_15890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14508.1"
                     /translation="MRKRIFNWLDHEFIELSGEATPGADVSAEARELFQRFDGELRSH
                     GLSLDSTVRSRLWGRDRASRDAGSNERVKILSGKARSASSSYIAPGHFDSLAKVAVDL
                     LAMRPARAELEKQIVEYVPAIVPIRFLVYDSVVVLSGVTTVLPTLAEQFDNILPRITG
                     SLSDAGSSWDKVAQVSFYFHRSQDLANLKNLFANRVTAKKIPRLEYVVVDGYSSEGKF
                     CEVEVTATR"
     gene            3020..4012
                     /locus_tag="VLM90_15895"
     CDS             3020..4012
                     /locus_tag="VLM90_15895"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase family protein"
                     /protein_id="HSQ14509.1"
                     /translation="MAATNLKIAILDDFEKIADTVPAYAKLKARADITLVRERLDSSE
                     KIVERLRAFDALLLMRERTFFSDKEYGQLPNLKFISQTGRTSVHLDLANATKRAIAIS
                     GTPSDTGAATKELTVGLILALARKIPQVNQRMREERWPAIPGMLLEGKTIGVLGLGRI
                     GNEVARIMKAFNTRVLGWSRSLTPERAAQVGAEAVPMETLLKESDFVTVHVHFSAQTT
                     GLIGAKEIALMKRGAFLVNTGRGPIINEEAMIAALESGQLGGVGLDVYDKEPLPMDHP
                     LRHFDNAVLMSHRGYATVEILRERYEQAINNLLAYLDGKPGNLINPDVQVRVAT"
     gene            4091..4684
                     /locus_tag="VLM90_15900"
     CDS             4091..4684
                     /locus_tag="VLM90_15900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14510.1"
                     /translation="MSPQLIDAAPAIANASEIEAPSYALALRVIGQDLAQLFPRVLEI
                     ETDGKVFEARGESHPNPFETIQEGFFARAWKKLRGVAPPPPAAATSAFSRRYESAEID
                     RLDQLKRAHRADDFRRADIYSLAERLRTMGAIVDGKNGRLKHLRKQADHLIVEYWDRH
                     NQLQSAKLTTVILYRNQQQLDHQRRSGPSELWEGYDF"
     gene            4747..>5409
                     /locus_tag="VLM90_15905"
     CDS             4747..>5409
                     /locus_tag="VLM90_15905"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSQ14511.1"
                     /translation="MVRDAKLSRAELGRISTVTVNHYDQRAEIFWRDTRDHDVSQNIQ
                     ALLQAIVGTPPFRILDFGCGPGRDLKAFKDLGHEPVGLDGSARFAAMARDLTGCEVWH
                     QDFLTLQLPVEHFDGIFANASLFHIPSQELPRILKELWQTLKPRGVLFSSNPRGDNQE
                     GWSGKRYGAYYNLEQWRKFMSAAGFTEITHYYRPPGLPRAEQPWLASLWRKPEFEPVH
                     HRI"
BASE COUNT         1196 a         1660 c         1478 g         1075 t
ORIGIN      
        1 ctggctgcgc gacgtgccga tcttttgcaa gccgataaaa gtcagcaagc tgatccctgt
       61 ctgcatcacg ccgaggatga caaacacgac caacgccgcc atcgcaaagc cgggcacgcc
      121 gccgaacaaa attaccgcta cgccaagggt gatcgtgcgc gcggccaagg aaacgatggt
      181 ggcggttaac ggcgtcgaat ggcgcaggcc aagccagcca tagacggcaa acagggcaaa
      241 agcaatcgac gccagcagtg cggtaacctc ggagctcatg ttcggttgct ccatcgggtg
      301 tactagagcg ctgccggcca gtcaaaggag ggacaaagca caggcatctt acctatggcc
      361 cgtcttttcg tatataatcc gaaccgttca aattgagttc tacgacatat cataaaggag
      421 cacccatgcg ccgaaccgtt accggaatat tcatcgtcct gcttttcgcc ctggcggcgc
      481 gccaagcctc ggcgcaggat cagatacgcg atctggtcgt caaaattcat gcggttcagc
      541 atgctccgga tttgctccgg ccatgggcga aaaatagtcc tcaacaggtg aaaggctccg
      601 gcgtggttat cgacggccga cggattctca ccaacgccca tgtggtgaaa catgccagcc
      661 agatctacgt gcaaccgaac caatcggcga gccatatttc ggcgcggatc gaagcgatca
      721 ccccagggat ggatctggcg atcttgaaac tggacgacga atcattcttc gataagcgcg
      781 gcgccctacc cttcgcccag gagctgccgc gggtcaaaga caacatcaat gtctacggct
      841 atcccaccgg cggcacggag ctctcggtga cccaagggat cgtatcgcgc atcgagtata
      901 ccgattatta ctaccaggcc accggtttgc gcattcaggt cgacgcagcg ctcaatttcg
      961 gcaacagcgg cggcccggcg gtaaccgacg gcaagctggt tggattggtg tttagcttaa
     1021 ttcaaaacgc ccagaacatc ggctatctga ttcccgtcga ggagattcaa cattttctca
     1081 ccgacatcaa agacggcgtg tacgacggca aaccgcagac ccatgatttg atccaaaccg
     1141 tcgagaacga tgctctgcgc cagcgcctcg gtctgcccaa gggcatcaac ggcgtcatgg
     1201 tctcgcagcc ttaccgcgac gattccaact acccgttgaa agagtgggat gtcatcacca
     1261 aagttggcga cacgcccatc gacagcgacg gcaaagttgc cattcgttac gacctgcgtt
     1321 tgtcggcatc ctacttggtt caaaagcatg ccaagaacgg ctcgctgccg ctcaccgtat
     1381 tccgcgctgg caagttaata tcgatcgatt tgccggtgcg ttcgcaaaga gagctggtga
     1441 ttccttattt gatggacgcc agtccgcgct atttcatatt cggaccgttc gtcttttccc
     1501 aaaccaccca ggattacctc gaacggctcg gcaaccaacg cccgacttca ttcggccggc
     1561 gcccgagccc gctggtgacc cggcgccaag accggccggc cttcgaagac gaagagctca
     1621 tcgtcgtcgc ctcgccgttg tttccggatc ggatcaccaa gggctacgac gaccccaatc
     1681 gctcggtgct gagcgagatc aacggcgtgc cggtgcgcaa catgcgccat ttggtcgaac
     1741 tgctgcgtga caatcgcgcc gagcagctca gcttcaagtt cgcctcgtca ggcgtattga
     1801 cccacgagac tatggtgttc aatcgcgccg atctcttgaa tgccaccggc aaaatcctcg
     1861 aagaaaatgg catccgctat ccctactcgc cagacctgcg cgcggtttgg gaagctgccc
     1921 cgaccggggc aaagtccgcc caagccacct gctgtggact gacgcagtag ccgatgcgcc
     1981 gaaaccattc gacagttggc ggaaatgcca cgtatgatcc gactcaagcg agggggaatt
     2041 atgttgaaga agttaggcgg tttaatgttc tttcttattg tcatcgtcgc cgccatcggt
     2101 ctcgctaatt tcctgtcaat aacgttttac gaaaagtcct tgctcactgt catcagtgac
     2161 ctcgtgttta tccttacgag aaactaacaa ctccggttcg gggcagcgat cttcgcgcgg
     2221 tgctgctgcc gtggcctggt cctcagcagc gagcgaaaca ggattggcct ggcgttgatc
     2281 ctaactccgc cctgtaatag gatcgcgccg ttcacacggg agtaatccgc catgcgcaaa
     2341 agaatattta actggctaga ccacgagttt atcgagctct cgggcgaagc gacacccggc
     2401 gccgatgtca gcgccgaggc gcgcgagctt tttcaacgct tcgacggtga gctacgctcc
     2461 cacggcctgt ccctggacag taccgtacgc tcgcgtctct gggggcgcga ccgcgccagc
     2521 cgcgacgccg gcagcaacga acgggtaaaa atactttcgg gcaaggcccg ttcggccagc
     2581 tccagctata tcgcgccagg ccatttcgat tcgctggcca aggtcgccgt cgacctgctc
     2641 gccatgcgcc ctgcccgcgc cgagttagaa aaacagatcg tcgagtacgt cccagccatc
     2701 gtgccgatcc gctttctagt ttacgactcg gtggtggtgc tctccggcgt caccaccgtg
     2761 ctgccgacgt tggccgagca gttcgacaat attttgccgc gtattaccgg ctctctcagc
     2821 gacgcgggca gctcctggga taaggtcgcg caggtttcgt tctactttca ccgcagccaa
     2881 gatttggcga acttgaaaaa cctctttgcc aaccgagtaa cggcgaaaaa aatcccaaga
     2941 ctggagtatg tcgtcgtcga cggttattcc tctgaaggga aattctgtga agtcgaagtg
     3001 accgcaacga ggtaacaaca tggccgcgac aaatttgaaa atcgccatac tcgacgactt
     3061 cgagaagatc gccgataccg tgccggccta tgccaagctc aaggcgcgcg ccgacatcac
     3121 actcgtgcgc gaacggctcg attccagtga aaagatcgtc gagcgcttgc gcgctttcga
     3181 tgcgctgctg ctcatgcgcg aacggacctt tttcagcgac aaggaatacg gccaactgcc
     3241 gaatttgaaa ttcatctcgc aaaccggccg caccagtgtc catttggatt tggccaatgc
     3301 caccaagcgc gccatcgcga tctccggcac gcccagcgac accggcgcag cgaccaaaga
     3361 actcaccgtc ggcttgatcc tggccttggc gcgcaagatt ccccaagtca atcaacgcat
     3421 gcgcgaggaa cgctggccgg cgattcccgg tatgttgctg gaaggcaaga ccatcggcgt
     3481 cctcggtctc ggccggatcg gcaacgaagt cgcgcgcatc atgaaggcct tcaacaccag
     3541 agtcctcggc tggtcgcgca gccttacgcc ggaacgggcc gcccaagtcg gcgccgaagc
     3601 ggtgccgatg gaaaccctgc tcaaagaatc ggatttcgtc acggttcacg tccattttag
     3661 cgcccagacc acgggcttaa tcggcgccaa agaaatcgcg ttaatgaaac gcggcgcatt
     3721 cctggtgaac accgggcgcg gcccgatcat caatgaagag gccatgatcg ccgccctcga
     3781 aagcggtcag ttgggcggcg tcggcctcga cgtctatgac aaggaaccgc tgccgatgga
     3841 tcacccgctg cgccatttcg acaacgccgt cctgatgtcc catcgcggct acgccacggt
     3901 ggagattttg cgcgagcgct acgagcaagc catcaacaac ctgttggcct acctcgacgg
     3961 caaaccgggc aatctgatca atcctgacgt gcaggttcgc gtcgctacct gagcaccgac
     4021 cgataatatt tgcacgcacc cagatagttt atgtttgcct tggccggcaa agcacattaa
     4081 aatttcgctc atgtcaccgc agctaattga cgccgcgcca gcgattgcca atgcctccga
     4141 gatagaggcg cctagctatg ctctggcctt gagagtgatt ggccaggact tagcgcagtt
     4201 atttcccaga gtccttgaaa ttgagaccga tggaaaagtc ttcgaagcgc gcggtgaaag
     4261 ccatcccaac ccattcgaga cgatccagga gggattcttt gccagggcgt ggaagaagct
     4321 ccgtggtgtc gcgccgccac caccagcggc ggcgaccagt gccttcagcc gccgctacga
     4381 atccgccgag atcgatcgtc tcgaccaact caaacgggcc catcgcgcgg acgattttcg
     4441 gcgcgccgat atttacagtt tagccgaacg gctgcgcacc atgggggcga tcgtcgacgg
     4501 caaaaacggc cggctcaagc atctgcgcaa gcaggccgat cacctgatcg tcgaatactg
     4561 ggaccggcat aaccaactgc agtccgccaa gctcaccacc gtgatcttgt accgcaacca
     4621 acaacagctc gaccatcaac gccgcagtgg cccgtccgaa ctttgggaag gctacgattt
     4681 ctaatccctc ccgctagcgc tgtttctctt gcaatcaaaa tatggccatg gttcgttcag
     4741 gcaatcatgg tccgcgatgc caaacttagc agagccgagc tcggccgtat ttccacggtg
     4801 acggtcaacc actacgatca gcgcgccgag attttttggc gcgacacccg cgaccacgac
     4861 gtcagccaaa acatccaggc gttgttgcag gcgatcgtcg gcacgccgcc ttttcgcatc
     4921 ctcgactttg gctgcggccc cggccgcgac ttgaaggcct tcaaagattt gggccatgaa
     4981 cccgtcggtc tcgacggctc ggcgcgcttt gccgcgatgg cgcgcgactt gactggctgc
     5041 gaagtctggc atcaggattt tctcacgctg caactgccgg tggaacattt cgacggtatt
     5101 ttcgccaacg cctcgctctt tcatatcccc agtcaggaat tgccacggat tttgaaggag
     5161 ctgtggcaga cgttgaaacc gcggggcgtg ctcttcagct ccaatccacg gggtgataat
     5221 caagaagggt ggagcggcaa acgctacggg gcgtactaca atctcgaaca atggcgtaaa
     5281 ttcatgagtg cagccggatt caccgagatc actcattact atcgcccgcc cggactgccg
     5341 cgggcggaac agccgtggct ggcgtcgttg tggcgcaagc cggaattcga gccggtgcac
     5401 catcgcatc
//
LOCUS       DATIRS010001235         1621 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_92749, whole genome shotgun sequence.
ACCESSION   DATIRS010001235 DATIRS010000000
VERSION     DATIRS010001235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1621
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92749"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            215..>1621
                     /locus_tag="VLM90_15910"
     CDS             215..>1621
                     /locus_tag="VLM90_15910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14512.1"
                     /translation="MQTVLGPFHPDLENALVDAISRHKKTDLLSPLLILVPSDVIRRR
                     LKILLSRERGLALLGVQLLTFHQLSLRLNAECGIATTELHSDLFLEEALRQIIRTGQP
                     GAEPFVGIEDRAGGCAALWQTLRDLRDGLVDPALALVALSEGHFSQPASERTAQLLAL
                     LQTLQHFCDDQGIRDLSDLDRRATEQAPASLFLQQFTEILYYGFYDLTQIQLDFFLAV
                     ARHYPTKLFFPLLPVKPSHDAWTFAARFYERYVQGHTSESVGDAESNSPLPTSARLFD
                     GDKSRNYAQASKKWHCQIVNTFGIQDEVATAAKEILRLVDDGKLAFHEIGVVVRGLES
                     YGTVIRDCFAQHRIPLAGRLEEPLVLFPLTKAVILLLNLPAKDFLRSQVIDLLSSPYF
                     QLHKLAADPAHARPDLWDLATRELAICNGVDEWRRLRRFAQRDLLLRQISDDDEARVI
                     RIAAAQLLSLADVVDALVA"
BASE COUNT          303 a          507 c          446 g          365 t
ORIGIN      
        1 tgtaaaccgt cacgcatgcc ttcttcggtc aaaaccactt tgggatagtt actcatgtgt
       61 ttctccttgt cggggcgcag catgctgcgc cctcatccga acccttcgta ctcttcgtgc
      121 ctccgtggtg aaaaaaatct ctcccttgcc aatcggcaac ggctatttca tattgatttg
      181 aacctgcaaa cgtttcgcca ttcgaaacaa caccatgcaa accgtcctcg gaccttttca
      241 tcccgatctc gaaaacgcgc ttgtcgacgc catttcgcgg cataaaaaaa ccgatctgct
      301 ctcgccgctg ttgatcctgg tgccgtccga tgtgatccgc cggcggctaa aaattctcct
      361 gagccgagaa cgcggcttgg cgctgctggg cgtgcagttg ctgacgtttc atcaattatc
      421 gttgcgcctc aatgccgaat gcggcatcgc gacgacggag ctgcatagcg atctttttct
      481 cgaagaagcg ttgcgccaga ttatccgcac cggccagccc ggcgccgagc cctttgtcgg
      541 catcgaagat cgcgccggcg gttgtgccgc gctttggcag acgctgcgag atttgcgcga
      601 cggtctggtc gatccggcgc tggcgctggt ggcgctcagc gagggacatt tcagccagcc
      661 cgccagcgag cgcacggcgc agctgctggc gctgctgcaa accttgcagc atttctgtga
      721 tgaccagggg attcgagatc tttccgatct cgatcggcgt gccaccgaac aggcgccggc
      781 gtcgctgttt ctccagcaat ttaccgagat tttatactac ggcttctacg atttgacgca
      841 gattcaactg gattttttcc tggcggtggc gcgccactat ccgaccaagt tgttctttcc
      901 gctgctcccc gtcaagccca gccatgacgc ttggacgttc gccgcacgct tttacgagcg
      961 ctatgtccaa ggacacacaa gtgagtcagt gggtgatgcg gaatcgaaca gccccttgcc
     1021 caccagcgcc cgcctgtttg acggcgacaa gagcagaaac tatgcgcaag ccagcaaaaa
     1081 gtggcactgc cagatcgtca acaccttcgg catccaggac gaagtcgcga cggcggccaa
     1141 agaaatcctg cggctggtcg acgacggcaa gttggcattt cacgagatcg gcgtggttgt
     1201 gcgtggtttg gaatcctacg gcacggtcat ccgcgactgc tttgcccaac atcgcatccc
     1261 gctcgccggc cgccttgaag aaccgctggt gctgtttcct ctgaccaagg cggtgatcct
     1321 gctgctcaat ttgccggcca aagattttct gcgcagccaa gttatcgact tgctgtcgtc
     1381 gccctatttc caattgcaca aactcgccgc tgaccccgcg cacgcgcgcc cggatctgtg
     1441 ggacttggcg acccgcgagc tagcgatctg caacggcgtc gacgaatggc gccggttgcg
     1501 ccgcttcgcc cagcgcgatt tattgctacg gcagatttcc gacgacgacg aagcgcgggt
     1561 gatccgcatc gccgcggcgc agctgctctc tcttgccgat gtcgtcgatg cgctggtggc
     1621 c
//
LOCUS       DATIRS010001236         1673 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_978029, whole genome shotgun sequence.
ACCESSION   DATIRS010001236 DATIRS010000000
VERSION     DATIRS010001236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1673
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_978029"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            16..1506
                     /locus_tag="VLM90_15915"
     CDS             16..1506
                     /locus_tag="VLM90_15915"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSQ14513.1"
                     /translation="MAQQGENFIDGKWQAAGSGKTFENRNPANTDDLIGLFPASGADD
                     VDVAVAAAKKAFAAWRLVPAPKRGEILYRVGDLLKKHKEDLAQIETREMGKVLKETRG
                     DVQEGIDCAFLNAGEGRRLFGETTPAELPNKFAMSVRTPIGVCALITPWNFPLAIPTW
                     KLFPALICGNTVILKPAEDTPHTATRFVEILSEAGVPPGVVNLVHGRGEDVGAALVRH
                     KDVQLVSFTGSAAVGREIASVCGQNLKRVSLELGGKNAQIVMEDADLELAVEGALWGA
                     FGTTGQRCTATSRLIVHRDVTKRVIDALIARAEKIRIGDGLDERNEMGPLINQAAREK
                     VLSYVEIGKGEGARLRTGGAVYDGGACARGFFFQPTIFDQVKPNMRIAQEEIFGPVLS
                     IIEVSSFEEAIAVLNDTAYGLSSSIYTNDVTRAFRAMRDIEAGITYINGPTIGAEVHL
                     PFGGVKDTGNGHREAGTTVYDIFTEWKSIYVDYSGKLQKAQIDNAD"
BASE COUNT          382 a          469 c          504 g          318 t
ORIGIN      
        1 tgcaggagaa tggttatggc acagcaaggt gaaaatttta tcgacggaaa gtggcaggcg
       61 gccggttccg gtaaaacctt cgaaaaccgt aatcctgcga ataccgacga cttaatcgga
      121 ttgtttccgg cctcgggagc cgatgatgtc gatgttgccg tggcagccgc caagaaagcc
      181 tttgccgctt ggcgtctggt gccggcaccc aagcgcggtg aaattctata ccgcgtcggc
      241 gacctgttaa aaaaacacaa ggaagatctt gcgcagatcg agactcgcga gatgggcaag
      301 gtgttgaagg aaacccgcgg cgatgttcag gaaggcatcg actgcgcgtt tctcaatgcc
      361 ggcgaggggc ggcgactgtt cggcgagact acgccggcgg agttgcccaa caaattcgcc
      421 atgtcggtgc gcacgccaat cggcgtgtgc gcattgatca cgccgtggaa tttcccgctg
      481 gcgattccaa cctggaaact atttcccgcg ctgatttgcg gcaatacggt gattctcaaa
      541 ccggccgagg acacgccgca cacggcaacc cgcttcgtcg agatcctcag cgaggccggt
      601 gtgccgccgg gcgtcgtcaa cctggtacac ggccgcggcg aagatgtcgg cgcggcgttg
      661 gtgcgtcata aggatgtgca gttggtttcg ttcaccggtt ccgccgcagt cggtcgcgag
      721 atcgcttcgg tgtgcggcca gaatctcaaa cgcgtctccc tcgaactcgg cggcaagaac
      781 gcgcagatcg tcatggaaga tgccgatctt gagttggccg tcgaaggcgc gctatggggc
      841 gccttcggca ccaccggcca gcgctgcacg gcgaccagtc ggctgatcgt ccatcgcgac
      901 gtaacaaaaa gagttatcga tgcgttaata gcgcgggcgg agaaaatcag aatcggcgac
      961 ggcctcgatg agcgcaacga gatgggaccg ctgatcaatc aagcggcgcg tgaaaaagtt
     1021 ctaagctacg ttgagatcgg taagggcgaa ggggcgcgcc tgcgcaccgg tggcgcggtt
     1081 tacgatggcg gtgcttgcgc caggggattc ttttttcagc cgacgatctt tgaccaggtg
     1141 aagcccaaca tgcgcatcgc ccaggaagaa atcttcggcc cggtgctgtc gatcatcgaa
     1201 gtctccagct tcgaggaagc catcgctgtg ctcaacgaca cggcgtacgg actgtcgagc
     1261 tcgatttaca ctaatgatgt gacgcgcgcg ttccgcgcca tgcgcgacat cgaggccggc
     1321 attacttata tcaacggtcc aaccatcggt gctgaagtgc atctgccatt cggcggcgtc
     1381 aaagatactg gcaacggcca ccgcgaggcc ggcaccacgg tgtacgatat tttcaccgag
     1441 tggaagtcga tctacgtcga ctattcaggc aaactgcaga aagcacagat cgataacgcg
     1501 gactagcacg aaatttgagg aagggagcga tcgacgcccg ccaattggaa cccatcacca
     1561 ctgttctcga ctaactctaa cggatcgatt atgaaaattc ccaacatcaa aaccgcgctt
     1621 cccggtccca aagccaaagc gatcgtcgag cgcgatgaga aatgcaccgc gcc
//
LOCUS       DATIRS010001237         2986 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1667063, whole genome shotgun sequence.
ACCESSION   DATIRS010001237 DATIRS010000000
VERSION     DATIRS010001237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2986)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2986)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2986
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1667063"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            96..389
                     /locus_tag="VLM90_15920"
     CDS             96..389
                     /locus_tag="VLM90_15920"
                     /inference="COORDINATES: protein motif:HMM:NF024979.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone modulator CbpM"
                     /protein_id="HSQ14514.1"
                     /translation="MPRKYLRITEVTKVCGVNVKFVKRLEQEQVISTVVRGNEKFYPL
                     DQVDRVRVAHLLIEEMGVNLEGAEVALNMREQMIAMQRQFNEILRLLGRELRK"
     gene            560..1855
                     /locus_tag="VLM90_15925"
     CDS             560..1855
                     /locus_tag="VLM90_15925"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: protein motif:HMM:NF002772.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008878 - glucose-1-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase"
                     /protein_id="HSQ14515.1"
                     /translation="MKRVLAMILGGGVGTRLYPLTKLRAKPAVPLGAKYRLIDIPISN
                     CINSDLQRIYVLTQFNSASLNRHISRTYAALGAGFSQGFVEVLAAQQTPESPNWFEGT
                     ADAVRKYIRLFAEWDVDQYLILSGDHLYRMNYADFIERHRETKADITLSVVPVDQSRA
                     SEFGLMAIDGHGRVRAFSEKPKGDAQKAMAVDTTVLGLSKEKAKELPYIASMGIYVFD
                     KQVLLDLLEKNPSHTDFGKEIIPAAAAHNRVQAYLFKDYWEDIGTIESFYQANLALTE
                     QPVPSFSFYDEKAPIYTRSRYLPPTKLLDSHIIESMVGEGCILKECTVKRSVIGIRSR
                     IETGCVIDNALLMGADYYESPAERQQVLDSGKVPLGVGANTTIQRAIVDKNARIGRNV
                     QIVNQDKIQESTREELGFVIRNGIVVIIKNATIPDGMVV"
     gene            complement(1892..>2986)
                     /locus_tag="VLM90_15930"
     CDS             complement(1892..>2986)
                     /locus_tag="VLM90_15930"
                     /inference="COORDINATES: protein motif:HMM:NF013347.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="THUMP domain-containing protein"
                     /protein_id="HSQ14516.1"
                     /translation="VHAVGGGVQFIGDLMVCYRVNLESRIASRVLWQVATAGYRSEND
                     IYRAAYAVPWTDWFDAARTIRVDVSATKSPLTSLNFVTLKIKDAVCDKIRQVSQQRPS
                     VDTRDPDIPIQGHLTDREFTLYLDTSGEPLFKRGQRIATGEAPLRENLAAGILRLAGW
                     TPGIPLLDPMCGSGTILVEAACMALDIAPGLGRRFAFEKFLNFNLTAWRELIQRRTAR
                     RKARVALPIHGSDLDGTVLQAALANLAGAGLGQVVSLKRASVLEITAPAKAGIIVSNP
                     PYGVRLGEQQALAELYPKLGDVLKRQFTGWRAYFLSADMRLPKLIRLATSKRTPLFNG
                     ALDCRLFEYKMIEGGMRKRRPVPGNDGVTQ"
BASE COUNT          664 a          857 c          859 g          606 t
ORIGIN      
        1 aggaagatat tgcccaagaa gtgatcgaca aaatcgacca agcctacggc gaaagcgtgc
       61 gtcaaaacat tcggctgtaa ccgaggaata gaaaaatgcc gcgaaaatat ttgcgcatta
      121 ccgaagtgac aaaagtctgc ggcgttaacg tgaagttcgt caaacgcctg gaacaggaac
      181 aggtcatctc gacggtcgtc cgcggtaacg aaaaattcta tcccctcgat caagtcgacc
      241 gtgtccgcgt cgcccatctg ctcatcgaag agatgggcgt aaacttagaa ggcgccgaag
      301 tcgcgctaaa catgcgcgag caaatgatcg ccatgcagcg ccagtttaat gaaatcctcc
      361 ggctgctcgg ccgcgagttg cgaaaataac cgcgtcgagc gagcgacccg gggggatcac
      421 tcgctgtatg ccgcttccga ctggatgacc gcggtgcggt tgacttaggc gcactcggtt
      481 gattactgtt cggaagggtc agggcttcaa gccgacgcgt gctcatggac cggagaaact
      541 agcgacgaaa ggtaactagg tgaaaagagt cctagcgatg attttaggcg gcggggtcgg
      601 cacccggctc taccctttaa ccaaactgcg cgccaagccg gcggtgccgc ttggcgccaa
      661 gtatcgcttg atcgatattc cgatcagtaa ttgcatcaac tccgatctcc agcgaattta
      721 cgtattgacg caatttaatt ccgcgtcgct caaccggcat atttcccgca cttacgccgc
      781 tttgggggcg ggcttctccc aaggattcgt cgaagtgctg gcggcgcagc aaactcccga
      841 aagtccgaat tggtttgaag gaacggccga cgcggtgcgc aagtatatcc ggctcttcgc
      901 ggaatgggat gtcgatcagt atctgatctt gtccggcgat cacttgtacc ggatgaatta
      961 tgctgacttc attgagcgcc accgcgagac caaggccgac atcaccctct cggtggtgcc
     1021 ggtggatcag agccgggctt ccgagttcgg attgatggcg atcgacggcc atggacgggt
     1081 gcgcgcgttc agcgaaaaac ccaaaggcga cgctcagaaa gcgatggccg tggacacgac
     1141 ggtgctcggc ctatcgaaag aaaaggcaaa agagctgcct tatatcgcct ccatgggcat
     1201 ctacgttttc gacaagcagg tgctgctcga tctgcttgag aaaaacccga gtcacaccga
     1261 tttcggcaag gaaatcattc cagcggcggc tgcgcataac cgagttcaag cttacttgtt
     1321 taaggactac tgggaggata tcggcaccat cgaatctttc taccaggcca atttggcgct
     1381 cacggagcag ccggttccat cattcagctt ttacgatgag aaagcgccga tttacacccg
     1441 ctcgcgctac ttgccaccga ccaagttact cgactcccat atcatcgaat ccatggtcgg
     1501 cgaaggctgc atactcaagg agtgtaccgt gaagcgctcg gtcatcggta ttcgctcgcg
     1561 catcgaaacc ggctgcgtga tcgataatgc attgctaatg ggcgcggatt attacgagtc
     1621 gccggcggaa cggcagcaag tcctcgacag cggtaaagtt cccctgggcg tcggcgccaa
     1681 caccaccatc cagcgggcca tcgtcgacaa aaacgcccgt atcggccgca acgtgcaaat
     1741 tgtcaatcaa gataagattc aggaatcgac tcgggaggag ctcggatttg tcatccgcaa
     1801 cggcatcgtc gtcatcatca agaatgccac gattcctgat ggaatggtgg tctaacgata
     1861 agcgtttttg tattctccaa ggatcgaccc gttattgggt cactccgtca ttgcccggta
     1921 ccggcctcct cttgcgcatt ccaccttcga tcatcttgta ctcgaacagc cggcagtcca
     1981 gcgcgccatt aaatagcggc gtgcgtttgg aagtggcgag ccggatgagc ttgggcagcc
     2041 gcatgtcggc gctgagaaag taagcgcgcc agccggtgaa ctgtcttttc aagacatcgc
     2101 ccagcttggg gtagagttcc gctagcgctt gctgctcgcc gaggcgcacg ccataaggcg
     2161 ggttgctgac gattatcccc gctttggccg gcgcggtgat ttccagaaca ctagcccgct
     2221 tcaaactgac gacctgtccc aggccggcac ccgccagatt cgccagcgcc gcttgcagta
     2281 ccgtgccgtc gagatcgctg ccatggatcg gcagcgccac gcgtgccttg cgccgcgccg
     2341 tgcgccgctg gatcagctcg cgccaagccg tcaagttgaa gttcagaaat ttttcaaagg
     2401 cgaaccggcg tcccaatccc ggcgcgatat cgagcgccat gcacgccgct tcgacgagaa
     2461 tcgtcccgct gccgcacatc gggtcgagca aggggatgcc cggagtccat ccggcgaggc
     2521 ggagaattcc cgcggcgagg ttttctctca acggcgcttc gccggtggcg atgcgctgcc
     2581 cgcgcttgaa caatggctca cccgaggtgt cgagatagag tgtaaactcg cgatcggtta
     2641 aatgaccttg gatcggaata tccggatcgc gcgtgtcgac actcggccgc tgctgcgaaa
     2701 cctggcggat tttgtcgcac accgcgtctt tgatcttgag cgtgacgaag ttgaggctcg
     2761 tgagcgggct cttggtcgcc gagacatcga cgcggatggt ccgggcggca tcgaaccagt
     2821 cggtccacgg caccgcgtaa gcggcacgat agatatcgtt ttcactacga taacccgctg
     2881 tcgcgacttg ccagagcacg cggctagcga tgcggctttc gagattgacc cggtagcaaa
     2941 ccatgagatc gccgatgaac tgcacgccgc cgccgacggc gtgaac
//
LOCUS       DATIRS010001238         2457 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_190572, whole genome shotgun sequence.
ACCESSION   DATIRS010001238 DATIRS010000000
VERSION     DATIRS010001238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2457)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2457)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2457
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190572"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(136..987)
                     /locus_tag="VLM90_15935"
     CDS             complement(136..987)
                     /locus_tag="VLM90_15935"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF006592.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HSQ14517.1"
                     /translation="MFKPWLLLAICTFTASFNNAGFVKAANAPALLLANELRPQIDPA
                     KYLISEKYDGVRALWDGKELRFRSGRPVNAPAWFVAKLPAEPLDGELWIGRGKFETLS
                     GIVRKTEPQDAEWRRIKYMIFELPNAPGTFAGRAQRIREIAAKAQSPQLVAVEQFRIT
                     DRAALKKKLEEVVRGGGEGLMLHLADSPYVTGRSDALFKLKPLQDTEAVVVEHVPGKG
                     KYTGMMGALRVRTPEAKVFLIGTGFTDEVRKKPPLVGTTITYTYRGLTNTGVPRFASY
                     LRVREEF"
     gene            complement(1068..>2457)
                     /gene="dnaB"
                     /locus_tag="VLM90_15940"
     CDS             complement(1068..>2457)
                     /gene="dnaB"
                     /locus_tag="VLM90_15940"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:NF004384.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HSQ14518.1"
                     /translation="IPSMAALEDNLRKIPPQNLEAESSVLGGILLENEAINVVLETLR
                     PEDFYRESHRRIMRAMIEITDRGEPVDLITLSEFLKTRNELESVGGSAYLASLADFVP
                     TAANIAFYVRIVHEKAILRNLISTATEIATRGYDEQGNVDEFLDTAEKVIFDISEKKI
                     KQSFVAVGDMITETLKTIDKLYQRKEMITGVSTGYDDLDKITAGLQPSELIIVAGRPG
                     MGKTAFALNIATNAAYTGVGAAVFSLEMGKEQLVLRMLCSEARVNSSKVRSGYLGERD
                     FPQLAKAAGKLHEAPIYIDDTPAISVLELRAKARRLVRDRSKKVGLIVVDYLQLMRGM
                     GNANNREQEISEISRSLKALAKELSVPVIALSQLNRRLEDRSERRPQMSDLRESGAIE
                     QDADVIMFIYRDEVYNKNNDDVKGKAEVIIAKQRNGPTGAIDLTFIGEFTRFENYTER
                     DEYGSRDEMDEA"
BASE COUNT          479 a          719 c          702 g          557 t
ORIGIN      
        1 cccgagctga ggcgagagat ctaagatagt tttccccttt ggtcgaaatg acatctttat
       61 ccgatcattt cgccttggcg cctttgcggg agaaattttt ataattcgat agcctggcag
      121 gagttccagc ccgtctcaga attcctcgcg cactcgtaag taactggcaa aacgcggcac
      181 gcccgtattg gtcaggccgc gataggtgta cgtgatcgtc gtgcccacta acggtggctt
      241 ctttctgacc tcatcggtga agcctgtgcc gatcagaaac accttggctt cgggcgtgcg
      301 cacgcgcagc gcgcccatca ttcctgtgta tttccccttg ccgggaacgt gctcgaccac
      361 cacggcttcg gtatcttgca gcggctttaa cttgaacagc gcatcgctgc ggccggtcac
      421 gtagggggag tctgccaaat gcagcatcag tccttcaccg ccgccgcgga cgacttcctc
      481 taacttcttt ttcagcgcgg cgcggtcagt gatgcggaat tgttccacgg caaccaactg
      541 cggcgattgg gccttggcgg caatttcccg tatgcgctgg gcgcgcccgg caaacgtccc
      601 cggcgcattg ggcagttcga agatcatgta tttgatccga cgccactctg cgtcttgcgg
      661 ttcggttttg cgcacgatac cggaaagcgt ttcgaattta ccgcggccga tccatagctc
      721 gccatcgagc ggctcggctg gcagcttggc aacaaaccac gccggcgcat tgaccggccg
      781 gccgctgcga aagcgcagct ccttgccgtc ccacagagcg cgcacgccgt cgtacttttc
      841 actgataaga tatttggcgg gatcgatctg tggccgaagc tcgttggcga gaagcaacgc
      901 cggtgcattc gccgctttga caaagccggc gttattgaac gaagcagtga aggtgcagat
      961 cgccagcaac aaccaaggct taaacaactt gggcccccgc gaaaaaccgc aaagtgcaat
     1021 ttgaaatctg taatttgcca ttcggcatgg cacaacgcgc catgccgcta cgcttcgtcc
     1081 atctcgtcgc gactgccgta ttcgtcgcgc tcggtgtagt tctcgaagcg ggtgaattcg
     1141 ccgatgaacg tcagatcgat ggcgccggtg gggccgttac gctgtttggc gatgatcact
     1201 tcggctttgc ctttcacatc gtcgttgttc ttgttgtaga cctcgtcgcg gtagatgaac
     1261 atgatcacgt cggcgtcctg ttcgatggcg ccggactcgc gcagatcgga catctgcggg
     1321 cggcgctcgg agcggtcttc caggcgccgg ttgagctgcg acagcgcgat caccggcacg
     1381 gagagttctt tggcgagagc cttcagcgac cgggatattt ctgaaatctc ctgctcacgg
     1441 ttgttggcgt tacccatgcc gcgcatgagc tgcaaataat cgacgacgat gaggccgact
     1501 tttttcgacc ggtcgcgtac caagcggcgc gctttggcgc gcagttccaa caccgatatc
     1561 gccggcgtgt cgtcgatata gatcggcgcc tcgtgaagct tgccggcggc cttggcgagc
     1621 tggggaaagt cgcgctcgcc caagtatccg gagcggactt tcgagctatt gacccgcgct
     1681 tcagagcaaa gcatgcgcaa aaccaactgc tccttgccca tttcaagcga aaataccgcg
     1741 gcgccgacgc cggtgtaggc ggcgttggtg gcgatgttga gggcgaaggc ggttttgccc
     1801 atgccgggcc gccccgccac aatgatcaat tccgaaggct gcaacccagc ggtaatcttg
     1861 tccaagtcgt cgtaaccggt ggacacgccg gtgatcattt ccttgcgttg gtaaagctta
     1921 tcgatggtct tgagcgtctc ggtaatcata tcgccgaccg cgacgaagga ctgttttatt
     1981 ttcttttcag agatatcgaa gatgactttt tcggcagtgt cgagaaactc atcgacattg
     2041 ccttgctcat cgtagccgcg cgtggcgatc tcggtggccg ttgaaatcaa attgcgcaga
     2101 atcgcctttt catgaacgat ccggacatag aaggcgatgt tggccgccgt cggcacgaaa
     2161 tcggccagcg acgccaagta agcgctgccg cccaccgatt ccagttcgtt cctggtttta
     2221 agaaactcac tcaaggtgat cagatccacc ggctcgccgc ggtcggtgat ctcgatcatg
     2281 gcgcgcatga tccggcggtg cgactcgcgg taaaagtcct ccgggcgcaa cgtctccagc
     2341 accacgttga tcgcttcgtt ctccaacagg atgccgccca aaaccgacga ctccgcctcc
     2401 aggttttgcg gaggaatctt gcgcagatta tcttctaagg cagccatgga cggtatt
//
LOCUS       DATIRS010001239         5990 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_487457, whole genome shotgun sequence.
ACCESSION   DATIRS010001239 DATIRS010000000
VERSION     DATIRS010001239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 5990)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5990)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5990
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_487457"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1136
                     /gene="glmS"
                     /locus_tag="VLM90_15945"
     CDS             <1..1136
                     /gene="glmS"
                     /locus_tag="VLM90_15945"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR01135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HSQ14519.1"
                     /translation="AKQITWDAIAAQKGGYPHFMLKEIHDQPRALADTFRGRIALKDG
                     NVALEDIKLKASAVKQIKRIHLVACGTAWHACLVGKFLLEEIAGIPAEVDYGSEFRYR
                     SPLMDPKSILLMVSQSGETADTLAATVIARANKAKILSICNVIDSSIPRKSHGVLYTH
                     AGPEISVASTKAFTTQLTALYLLAIALGRMNGKLKSADARKLLRDLMHLPTWIEEALK
                     LEPEVRVLARDLLHSRDFLYLGRGINYPIALEGALKLKEISYIHAEGYPAGEMKHGPI
                     ALIDEKLPVVVLAPRDRYFDKTISNLKEVESRGGKIIVLTDDSKTAAEIPAFRVLTLP
                     KASHYLTPIVMTIPLQLLAYYIAVLGGKDVDQPRNLAKSVTVE"
     gene            1136..2404
                     /locus_tag="VLM90_15950"
     CDS             1136..2404
                     /locus_tag="VLM90_15950"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ14520.1"
                     /translation="MALWQRGSTQLAITLSSLKHRNFRLLFCGTSLSHVGDFIQAMAQ
                     SWLVWQMTKSPFLLGVVGFAQALPRLLLGAIGGAIVDRVERRRLLLCTQFLAMAQAIV
                     FWAVVQFAWVEFWHVLLLVLFLGMVNSLNQTARHSLINNIVPRADLMNAIALNSSLAN
                     LAKIIGPSLGGVLIGVIGIAGCLLVNAFSFFAIIVTLVVMEIPPGRAKVNDATPFWQE
                     VSQGYRFLRSDRRLLSLILLTYGIALVGTPYSRFLPVFATDVLHAGPTTFGLLLAAPG
                     VGAVLAGLGIASLGRLRRRLHFVATAVLAFSISLMLFSFSRSIYLSMLFLILVGASNI
                     AFRAVANSIVQMETPPQYLGRMLSLFFMDKGLWSFGTLFIGSVAHLVGTPRAITICGA
                     VCALAAAVLLYQQRQARGGEPAQGLDQRVA"
     gene            complement(2384..3376)
                     /locus_tag="VLM90_15955"
     CDS             complement(2384..3376)
                     /locus_tag="VLM90_15955"
                     /inference="COORDINATES: protein motif:HMM:NF013269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14521.1"
                     /translation="MSEFSKDPLTGRGVILAPERAQRPEQFDPTSTAESDQPCPFCPG
                     NERQTPPESWADRPADSPPDRPGWSIRVVPNKYPAVTADDGIADGQTADRSAGAGIHE
                     VIIENPAHVANLAALDEAQFSKIFRAYRGRLRAIREDRRWRFALIFKNQSERAGATLE
                     HAHAQLLALPFVPADVEKELAGARDYHRRNASCYYCALIERELQARVRVVTSSADFIA
                     LCPAAPRFAFETWILPRVHGAAFEHADDSIIAALAKISRRVIAALDRLRANPPFNYFI
                     QSLPLADSERAHYHWQLRLLPQFSRAAGFEWGSGIHINPVAPEAAAQVLRDALI"
     gene            complement(3380..3994)
                     /locus_tag="VLM90_15960"
     CDS             complement(3380..3994)
                     /locus_tag="VLM90_15960"
                     /inference="COORDINATES: protein motif:HMM:NF013856.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HSQ14522.1"
                     /translation="MAYNPQDRYFNKAKQDGYRSRAAYKLVELQQRFRLLNPGDRVVD
                     LGAAPGGWLQVAAKLVGPNGKVIGVDVQAIQPFQERNIGLIQGDILTGETHTKVKELL
                     GGTAHCVLSDMAPKLSGIRDADMARSYALNQMALQVAKELLRPGGILLVKSFVSEDLQ
                     SYTAELKNHFTLVQRTKPEASRPGSSEFYFYAKGYAAKTNAVVW"
     gene            complement(4089..4850)
                     /locus_tag="VLM90_15965"
     CDS             complement(4089..4850)
                     /locus_tag="VLM90_15965"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HSQ14523.1"
                     /translation="MSKRTAQSLTLALLIGFAAQTSFAAPDEYDDSQSHPLRILAYVW
                     HPVGWLAEWTIFRHFHYLVSATPQQEKVFGHNPHPPVLAEPQPLYDFGAAKKVPVQTV
                     HIAPPAPAPVPMPEHVKIVQVPVEKTVIQVQEKIVEVERLVFTPVAFNFDSGQLTDLG
                     KGQVYLAAQRLKERGNLTIVVEGHADNRGDDGYNQKLGLQRAQTVMTELAAFGVDPSR
                     MSTVSVGEGKPLIEQDTAWARAINRRVEFQVKSAK"
     gene            5002..5763
                     /locus_tag="VLM90_15970"
     CDS             5002..5763
                     /locus_tag="VLM90_15970"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HSQ14524.1"
                     /translation="MSVAVAKTDRLLTVTWDRPPLNVLDIVLLRELDEILKRCAADPT
                     IDVVVLQGQGSKAFSAGVDIKDHTKEKVPEMLDVVHGVIRRLLSLPQVTIAAVRGACL
                     GGGCEVASVCDFVVASEESSFATPEILVGCYPPVALARFASLIGYHRAAEMILTGRRL
                     SAHEAQAMGLINRVFAESELETGVQSLVGELLSKSGAVMRLTLKGLRELSLRDFAAAL
                     RRSEQIYCDELLKTADVEEGVQAFLQKRPPQWRHR"
     gene            5782..5952
                     /locus_tag="VLM90_15975"
     CDS             5782..5952
                     /locus_tag="VLM90_15975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14525.1"
                     /translation="MILKVTLAGDEGNLERRGYVFLANHVGYIDGIVLGSIFPSTSYP
                     TRKSAVGPSSAR"
BASE COUNT         1148 a         1709 c         1770 g         1363 t
ORIGIN      
        1 cggcgaaaca gatcacttgg gatgccatcg cggcgcaaaa aggcggctac ccgcatttca
       61 tgttgaagga gattcatgac cagccgcgcg ctttggccga tacctttcgc ggccgcatcg
      121 cactcaaaga cggcaatgtg gcgctggaag atattaagct caaagccagc gcggtgaaac
      181 agatcaaacg aatacactta gtcgcttgcg gcaccgcttg gcatgcctgt ctggtcggca
      241 agtttttgct tgaagagatc gccggcattc ccgccgaggt ggattacggt tcggagtttc
      301 gctatcgctc gccgttgatg gacccgaagt cgatcttgct gatggtgagc cagtccggcg
      361 agaccgccga taccttggcg gccaccgtta tcgcccgcgc caataaagcg aaaattctgt
      421 cgatctgcaa cgtcatcgat tcatccatcc cacgcaaatc ccatggtgtc ctttacaccc
      481 atgccggccc tgagatcagt gtcgccagca ccaaagcgtt taccacccaa ttaaccgcgc
      541 tctacttgct cgccatcgcg cttggccgga tgaacggcaa gctcaaatca gccgacgcgc
      601 gtaaattgct gcgcgatctg atgcatctgc cgacctggat cgaagaagcc ttgaagctcg
      661 aacctgaagt cagagtgttg gcccgcgatc tgctccacag ccgtgacttt ctctatctcg
      721 gccgcggcat caattatccc atcgcactgg agggagcgct taaactgaaa gagatttcct
      781 acatccatgc cgagggctat ccggcaggcg agatgaagca tgggccgatc gccttgatcg
      841 acgagaagct gccggtggtg gtgctggcgc cgcgggatcg ttacttcgac aaaaccatca
      901 gtaatttaaa agaagtcgag tcgcgcggcg gcaaaatcat cgtcctaacc gacgatagca
      961 aaaccgccgc ggagattccc gcatttcggg tcttgacgct gcccaaagct tcgcactatc
     1021 ttacgcccat cgtgatgacc atcccgctgc aattgctagc ctattacatc gccgtgctgg
     1081 gcggcaagga tgtcgatcaa ccgcgcaatc tggccaagag cgttacggtc gaataatggc
     1141 cctttggcaa cgagggtcga cgcaactcgc gataacgctt agctcgctca agcaccgcaa
     1201 cttccgtctg cttttctgcg gcaccagcct gtcccatgtc ggcgatttca tccaggcgat
     1261 ggcgcagagc tggctagtct ggcagatgac caagtcaccg tttctactcg gcgtcgtcgg
     1321 cttcgcccag gcgctgccac gcttgctctt aggcgccatc ggcggcgcca tcgtcgaccg
     1381 tgtcgaacgg cgccggctgc tgctgtgcac gcaattctta gccatggcgc aggcaattgt
     1441 attttgggcc gtggtgcaat tcgcgtgggt cgagttctgg catgtgctgc tgctggtgtt
     1501 gttcctcggc atggtcaatt cgcttaacca gactgcgcgt cattcgctga tcaacaatat
     1561 cgtgccgcgc gcggatttga tgaatgccat cgcgctcaat tcatcgctgg cgaacttggc
     1621 gaagatcatc ggcccgtctt tgggcggtgt gctgatcggc gtgattggca tcgccggctg
     1681 cttgctggtg aatgccttca gctttttcgc gatcatcgtc accttagtgg taatggaaat
     1741 tcctccaggg cgtgccaagg tcaatgacgc aactccattc tggcaggaag tttcccaggg
     1801 ctatcgtttt ctccgcagcg accggcggct gctctcgctg attctcctga cctacggcat
     1861 cgcgctggtc ggcacgccct actcgcgttt cttacccgtg ttcgccaccg acgtgctcca
     1921 tgccgggccg acgacgttcg ggttgttgct cgccgcgcca ggtgtcggcg cggtcctcgc
     1981 tggcctaggc atcgcgtccc tcggccgttt gcgccggcgt cttcatttcg tcgccacggc
     2041 ggtgttggcg ttctcgattt ccctgatgct cttttccttt tcccgctcga tctatctgtc
     2101 catgctgttt ctcatcctgg ttggcgccag taacatcgct tttcgcgccg ttgccaactc
     2161 catcgtccaa atggaaacgc cgccgcagta tctcggccgt atgctcagtc tgtttttcat
     2221 ggataagggg ctgtggtcct tcggcacgct gtttatcggc agtgtcgccc atctggtcgg
     2281 tacgccgcgg gcgattacca tttgcggcgc ggtttgcgcg cttgccgccg cggtgctgtt
     2341 gtaccagcaa aggcaagcgc gcggcggcga gccggctcag ggcttagatc agcgcgtcgc
     2401 gtaaaacctg cgccgccgct tccggcgcca cgggattgat atgaatcccc gaaccccatt
     2461 cgaatccggc agcgcgagaa aactgcggaa gcaagcgcaa ctgccaatga taatgggcgc
     2521 gctcactgtc agccaaaggc agcgactgaa tgaaataatt gaacggtgga ttggcccgca
     2581 gccggtccaa cgcggcaatc acccggcgcg agatttttgc cagagcggcg atgatcgagt
     2641 catcggcgtg ctcgaaggcg gcgccatgaa ccctcggaag tatccaggtt tcaaaggcaa
     2701 agcgcggcgc cgcgggacag agcgcgatga aatctgcact gctcgtgacc acccgcactc
     2761 gtgcctggag ttcgcgttcg atcaacgcgc agtaatagca gctggcgttg cgccgatggt
     2821 agtcgcgggc gccggccaat tccttctcca catcggcggg gacgaacggc aaagcgagca
     2881 gttgcgcatg cgcatgttct agcgtcgcgc cggcgcgctc gctttggttc ttgaagatca
     2941 aggcgaagcg ccagcggcga tcctcgcgta tggcgcgcaa gcgcccgcgg taggcacgaa
     3001 aaatcttgct gaactgtgct tcgtctagcg cagccaggtt ggcgacatga gccgggtttt
     3061 ctattatgac ttcatgaatg ccggcgccgg cggaccgatc tgcggtttgg ccatcggcta
     3121 tgccatcatc ggcagtgacg gccgggtatt tgttcggtac cacgcggatc gaccagccgg
     3181 gccgatcggg cggcgaatcc gctggccgat ccgcccagga ttccggtggc gtttggcgtt
     3241 cattgccagg gcaaaatggg cagggttggt ctgactccgc ggtgctcgtc gggtcaaact
     3301 gttcgggccg ctgtgcgcgc tcaggtgcga ggatcacgcc gcggccggtg agcgggtctt
     3361 tgctgaattc cgacattact taccatacga ccgcgttagt ttttgccgca tagcccttgg
     3421 cgtagaagta aaactcggag gaacctgggc ggctcgcttc cggcttggtg cgttgcacca
     3481 gggtgaaatg attttttagc tcggccgtgt agctttgcag atcctcgctg acaaaactct
     3541 tgaccagcaa tatcccgcct gggcgcagta gctccttggc gacttggagc gccatctggt
     3601 tgagcgcgta ggagcgcgcc atatcggcgt cacgaatgcc gctcagtttg ggcgccatat
     3661 ccgagagcac gcagtgcgca gttccaccca atagctcttt gactttggtg tgagtttcac
     3721 cggtcagaat atcgccttga attagcccga tattgcgctc ctgaaagggc tggatcgctt
     3781 gcacatcgac gccgattact ttgccattgg gaccgacgag cttagcggcg acctgcaacc
     3841 agccgcctgg cgccgcaccc aggtcgacga cccggtcgcc gggattgagc aagcgaaagc
     3901 gctgctgtag ttcgacaagt ttgtaggcgg cgcgggagcg atagccgtcc tgtttggctt
     3961 tattgaaata gcggtcttga gggttgtagg ccatgtgccg gttgtgcttg ttactctacc
     4021 cgatcggcgc caataaaaaa gcccagccga agaagacggc tgggcttggt tacgatggat
     4081 cgattacgct atttcgccga ttttacctga aattcgacgc gccggttaat cgcccgcgcc
     4141 catgcggtgt cctgctcgat taacggcttg ccttcgccga cgctgaccgt agacatccgg
     4201 ctcggatcga cgccgaatgc agccagttca gtcatgaccg tctgagcgcg ctgcaggcca
     4261 agtttctgat tgtagccatc gtcgccacga ttatcggcat ggccttcgac gacaatggtc
     4321 aggttgccgc gctctttgag ccgctgggcg gcgaggtaaa cttgaccctt gcccaagtcg
     4381 gtcaattgac ccgagtcgaa attgaaagca accggtgtga aaaccaaacg ttcgacctcg
     4441 acgatcttct cctgaacttg aataacggtc ttttccaccg gaacttggac gatcttcaca
     4501 tgctccggca tcggcactgg cgccggcgcc ggtggtgcga tgtgcactgt ctgcaccgga
     4561 acttttttag ctgcgccgaa gtcgtacaaa ggttgcggct cagccagtac cggcgggtgg
     4621 ggattgtggc caaaaacctt ttcctgctgt ggggtcgcgc tgacgagata atgaaagtgt
     4681 cgaaagatgg tccactcggc gagccagccc accggatgcc aaacgtaggc gagaattctt
     4741 aacggatggg actggctatc gtcgtattca tctggcgcgg cgaagctggt ctgcgcggca
     4801 aagccgatta gtagtgccaa tgtcaatgac tgggctgttc gtttactcat gtttcgccct
     4861 ccttgggacg ctgatagaac gttagtttag gagctgcgga tgggtttgtc aaacttttgt
     4921 ttagcgactg ccttgtaagc ggcaggatca tcggtttaat acaaggccaa atagtggatg
     4981 tctccttagg agggaattgc catgagtgta gcagtcgcta agacagaccg gttgctgacg
     5041 gttacgtggg acaggccgcc gttaaacgtt ctcgatatcg tattgttgcg cgagctcgac
     5101 gagattctca agcgctgcgc ggcggaccct actattgacg tcgtggtctt gcaggggcaa
     5161 gggtccaaag ccttttccgc cggtgtggac atcaaggatc acaccaaaga gaaagttccc
     5221 gaaatgctcg acgtggtcca cggcgtgatt cgccggctct tgagcctgcc ccaagtgacc
     5281 atcgccgcgg tgcgcggcgc ttgtctcggc ggcggttgcg aagtcgccag tgtgtgcgac
     5341 tttgtcgtcg cttcggagga aagttctttc gcaaccccgg aaattcttgt tggttgttac
     5401 ccgccggtgg cgttggcgcg ctttgcgtca ttgatcggtt accaccgggc ggcggaaatg
     5461 attctcaccg ggcggcgctt gagtgctcac gaagctcagg ccatgggctt gatcaatcgg
     5521 gtgtttgccg aaagtgaact ggaaactggt gtgcagagtc tggtgggcga attgctcagt
     5581 aaaagcggcg cggttatgcg tctgacgctc aaagggctgc gcgagttgtc tttgcgcgat
     5641 tttgcagctg cgctcagacg ctccgaacaa atttactgtg atgaactgtt aaaaaccgcc
     5701 gatgtcgaag aaggggtgca ggcttttttg cagaaacggc cgccacaatg gcgccatcgc
     5761 tagagatcgg agcgccgcgc attgatttta aaagttacgc ttgccggcga cgaaggcaat
     5821 ctggagcgcc gcggctacgt tttcctcgcc aatcacgtcg gttacatcga cgggatcgtg
     5881 ctcggcagca ttttcccatc gacttcgtat ccaacaagga agtccgcggt tggcccatcg
     5941 tccgcccggt gacgatccag cccaagattg aatgttttcg ctatcgggat
//
LOCUS       DATIRS010001240         2074 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_191257, whole genome shotgun sequence.
ACCESSION   DATIRS010001240 DATIRS010000000
VERSION     DATIRS010001240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2074
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191257"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..499
                     /locus_tag="VLM90_15980"
     CDS             <1..499
                     /locus_tag="VLM90_15980"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSQ14526.1"
                     /translation="PNFWLGPLLMILFSIQLGWTPVSGRGSLLHVILPALTLGLGMAA
                     IVTRILRASLIQVARAEFVQTARAKGLSEKQVWLKHMLRNALLSVVTIMSLQFGALLA
                     GSLITETVFSWPGIGRLTVQAIQTRDYPLVQGCVLVIAVAYVLVNFFTDILYKLIDPR
                     VSYGD"
     gene            489..1289
                     /locus_tag="VLM90_15985"
     CDS             489..1289
                     /locus_tag="VLM90_15985"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HSQ14527.1"
                     /translation="MATRVWFNTGVAILLVLLASALLAPVIAPHNPLRQNLEKDLIAY
                     SAAHPLGTDKLGRDILSRTLYGTRISLSVGFANVALSLAIGFVVGALAGYFGGWVDLL
                     LMRLVDILLAFPGILLAIAFTAVLGPGLDHVILALCLIGWTGYARLARGEIIALRERE
                     FVQAARALGGSPKRVVLRHLLPNLLAPLLIQATFGLAAAIIAEGSLSFLGLGVEPPTP
                     SWGSMLNDGRQFLLVAPHLTTYPGLAIMITVFALNLVGDGLQERLERR"
     gene            1496..1669
                     /locus_tag="VLM90_15990"
                     /pseudo
     CDS             1496..1669
                     /locus_tag="VLM90_15990"
                     /inference="COORDINATES: protein motif:HMM:NF024809.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
     gene            1691..2017
                     /locus_tag="VLM90_15995"
     CDS             1691..2017
                     /locus_tag="VLM90_15995"
                     /inference="COORDINATES: protein motif:HMM:NF025850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HSQ14528.1"
                     /translation="MPRGQLDRAKVRIWVDFFNTRVHPTGSDLQKKRDPEKAQVRMDQ
                     HLRTLDDALAGKDYLVGNQFSLADVTFIPFYTRRERYTVSFDNYPNVKRWAENLIARP
                     KVAPTL"
BASE COUNT          408 a          621 c          572 g          473 t
ORIGIN      
        1 gcccaatttt tggttggggc cgctgttgat gatcctgttt tccatccagc tcggctggac
       61 gccggtttcg gggcgcggca gcttgcttca cgtaattttg ccggcgttga ctttgggttt
      121 gggcatggcc gcgatcgtga cacgcatctt gcgcgccagt ctgatccagg tcgcccgcgc
      181 tgagttcgtt caaaccgccc gcgccaaggg gctcagtgaa aagcaagtgt ggctcaaaca
      241 tatgctgcgc aacgcgctgt tgtcggtggt gacgatcatg agcctgcaat tcggcgccct
      301 gctcgccggc tcgttgatca ccgaaaccgt attcagttgg cctggcatcg gcagactgac
      361 cgtgcaggcg atccagactc gcgactatcc gctggtgcaa ggttgtgtgt tggtcatcgc
      421 ggtcgcctat gtgctggtga atttctttac cgacatcctt tacaaactta tcgatccacg
      481 ggtgagctat ggcgactaga gtctggttca acaccggcgt ggcgatcttg ctggtcctgt
      541 tagcctcggc gctattggca ccggtcatag cgccgcataa tccgttacgg caaaacttag
      601 agaaagacct gatcgcttac agtgccgctc atccgctcgg caccgataaa ctcggccgcg
      661 acatcttgag ccgcacgctt tacggcactc gcatctcgct ctcggtcggc ttcgccaacg
      721 tggcgctctc cctcgccatc ggcttcgtcg tcggcgccct cgcgggttac ttcggcggct
      781 gggtcgattt attgctcatg cgcctggtcg atatcctgct ggcttttccc ggcattctcc
      841 tggccatcgc gttcaccgcc gtgctcgggc cggggctcga tcacgttatc ctcgcgcttt
      901 gcctgatcgg ctggaccggc tatgcccgtc tggcgcgcgg cgagatcatc gccctgcgcg
      961 aacgagaatt cgtccaagcc gcccgcgccc tcggcggcag tcccaagcgc gttgttttac
     1021 gccatctgtt acccaatctc ctggcaccgt tattgatcca agcgactttc ggcctcgccg
     1081 ccgcgatcat cgccgaaggc agcttgagtt tcctgggcct tggcgtcgaa ccgccgacac
     1141 cgtcctgggg atcgatgctg aacgacggcc ggcagtttct cctggtcgcg ccgcatctca
     1201 ccacctatcc cgggctggcg atcatgatca cggtcttcgc gctcaatctc gtcggtgatg
     1261 gattacaaga acggctagag aggcgatagt tcaagccgtt caaatcgctc aatcgctacg
     1321 ctgcgttcaa accgtatccc gaggttttct gtctatttga acgacttgaa cgttttgaac
     1381 ggcttgaacg agttgtatta gattgcctaa ccccggccac gatgataatt agtctcaaat
     1441 caaggagggc tccgcgatga aattatacac cagccgcacc tgaccctacg cccacaggac
     1501 aaggattgtc ctggccgaaa agaacatccc ttaccaaacg atcgaagtcg atctcaagaa
     1561 caaaccggaa gatctggtta agcaaaatcc ctacggcaag gtgccggtgt tggtcgacgg
     1621 cgatggcgtc atctacgagt cggccgtgat caacgagtat ctcgacgaga aattcgccga
     1681 cgcaccgctc atgccgcgcg gtcaactcga tcgcgccaag gtgaggattt gggtggattt
     1741 cttcaacacc cgcgtgcatc cgacgggaag cgatctacaa aaaaaacgtg accctgagaa
     1801 agcccaagtg cgcatggatc aacacctgcg cactctcgac gacgccttgg ccggcaaaga
     1861 ctatctggtc ggcaatcagt tctcgctggc ggatgtcacg ttcatcccct tctatacccg
     1921 gcgcgaacgc tacacggtga gttttgacaa ctatcccaac gtcaagcgtt gggcggagaa
     1981 tctaattgca cgacccaaag tagcgccgac gctgtaagac agaccaattg gagtgttgga
     2041 gtattggaat gttggggcat tgggatccga aacc
//
LOCUS       DATIRS010001241         3572 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_782459, whole genome shotgun sequence.
ACCESSION   DATIRS010001241 DATIRS010000000
VERSION     DATIRS010001241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3572
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_782459"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..368)
                     /locus_tag="VLM90_16000"
     CDS             complement(<1..368)
                     /locus_tag="VLM90_16000"
                     /inference="COORDINATES: protein motif:HMM:NF024923.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-binding protein"
                     /protein_id="HSQ14529.1"
                     /translation="MKAKIVTWIILGALIVVGAGYSLRNVFGNRSEFVISGIVEADDI
                     HVGSKVGGRVLKVVAKEGQAVKAGEPLVLLDARELNAALAEAQASLRQSDAKFALLSA
                     GYRKEEIEQAEAAMGQAQAEL"
     gene            complement(763..1635)
                     /locus_tag="VLM90_16005"
     CDS             complement(763..1635)
                     /locus_tag="VLM90_16005"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HSQ14530.1"
                     /translation="MARHTETQRLKWALIISSVYFFAELTAGFLTNSLALLSDAGHML
                     SDIGALALSLFAFRVAKRPATHHSTYGYHRVEILAALFNGLTLWLIVGVIFTSAYYRL
                     ANPPAVESFGMIVVAVLGLLVNFAAAAILHSGHQHNLNMRGAFLHVISDAIGSVGAIA
                     AGAIMLATGWYLADPLISMFIGALILYSSWSLIKDSLSVLMQSVPKGIRLDEVRQTIE
                     AVDGVHKVHDLHVWAVTSDIYTLSAHAVVENGGDFHEVLNGIEDTLKERFNIEHTTIQ
                     LETESREDKEFKDF"
     gene            complement(1723..2838)
                     /locus_tag="VLM90_16010"
     CDS             complement(1723..2838)
                     /locus_tag="VLM90_16010"
                     /inference="COORDINATES: protein motif:HMM:NF015523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MltA domain-containing protein"
                     /protein_id="HSQ14531.1"
                     /translation="MAIAVAGCALPVTVPWPALSDDLDVASLRLAIGHSIGYLKKLPA
                     ERIVGEQPRPFTAGELIDSLIAFDRLLDHWHCRGCLARAIAAAFEIIPSSAAADQAEV
                     LFTGYYQPVIDGSLTPGDGFDYAIYGVPADLPRQEQAGANGAANDEKTPGTIENQLPV
                     QYYSRREIDQLGALRGRALEIAWVKDPIDLFFLHIQGSGRLRLRDGREVTVGYAAHNG
                     LPYRSIGRMLIDGGKVSKEEMSMQRLRRYLVENPGEQDEILAYNESYVFFRLHEGGPL
                     GSLGVPVTAGRSIATDSRLFPRGALALVQVEIPVIGPQGELAGWRPVTRFVLNQDTGG
                     AIRGPQRADYYFGTGDQAGALAGYMNRQGRLYFLVRK"
     gene            2904..3272
                     /locus_tag="VLM90_16015"
     CDS             2904..3272
                     /locus_tag="VLM90_16015"
                     /inference="COORDINATES: protein motif:HMM:NF018021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallopeptidase family protein"
                     /protein_id="HSQ14532.1"
                     /translation="MNHLDIRKEVARLIDRLPRQFREQLRNVEFVVEDRPSEELLLAE
                     ELDPEEETLYGLYQGIPLPERSSLDPPLLPDKITIFAEPLLEDFPDPEELREEIRLTV
                     LHEIAHYFGMDEEDIENLGY"
     gene            complement(3368..>3572)
                     /locus_tag="VLM90_16020"
     CDS             complement(3368..>3572)
                     /locus_tag="VLM90_16020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14533.1"
                     /translation="DYFKYFMDVRSGKVPGRQNNKQVTFFINAGTQGLQFAACAGKVV
                     ELAKKAKVGRELPTEWFLQDIRD"
BASE COUNT          783 a         1093 c          974 g          722 t
ORIGIN      
        1 agttccgctt gggcttggcc catggcggct tcggcttgtt cgatttcttc cttgcggtag
       61 cccgcgctta acaaagcaaa cttggcgtcg gactgacgca agctcgcctg cgcctcggcg
      121 agcgccgcgt tgagctcgcg cgcatcgagc aacaccagcg gctcgccggc cttgacggcc
      181 tggccttcct tggccacaac tttcaagacc cgcccgccaa ccttggaacc gacatgaata
      241 tcgtccgcct cgacgatgcc ggagataacg aattcgctgc ggttgccgaa gacgttacgc
      301 aatgaataac cggcgccgac aacgatcagg gcgccaagaa taatccaggt tacgatcttc
      361 gctttcacgg aaaggattta gcgtagtgtc acacgctgct attgtttatc cggagtaact
      421 caccacgaag gcacgaaggg ttcggatgac taaacctccg aacttcgtac tctatgcctc
      481 gaaatgtacg cggcttgcgc aaattttccg gtaacgggaa taccagaaca tgggtttggc
      541 tctcgcaaag gcgcaaagct cgccaagttc ggagggaaga gatgaattat cgtgaagaat
      601 ttattcaccg ttattttccg gcctttgcgg cctttgcgtc attgcgagag atattccgag
      661 tttcggttgc ggcgcagccg cgctgtgtcc ttcgtggtga aaaactcttt cccatttggt
      721 tgcgacgctg tcgcaccaga gccttcgtgg tgaattacca tcctaaaaat ccttgaactc
      781 cttgtcctcg cggctctcgg tttccagttg gatcgtcgta tgttcgatgt tgaaacgctc
      841 tttcaaagta tcctcgatgc cgttcaacac ttcatggaaa tcgccgccgt tctccaccac
      901 cgcatgggcg ctcagcgtgt agatatccga tgtcaccgcc caaacatgca ggtcgtgaac
      961 cttgtggacg ccgtccaccg cttcgatggt ctggcgcact tcatcgagac gaatgccctt
     1021 gggcaccgac tgcatgagca cactgaggga gtctttgatc aggctccagg acgagtacag
     1081 aatcagcgcg ccgataaaca tactgatcag cggatcggcc agataccaac cggtggccaa
     1141 catgatcgcg cccgcggcga tggcgcccac cgagccgatg gcgtcgctta tgacatggag
     1201 aaacgcgccg cgcatgttga gattgtgctg atggccggag tggaggatcg ccgccgcggc
     1261 gaaattgacc aatagcccca gaaccgcgac gacgatcatg ccaaaacttt ccaccgccgg
     1321 cggattggcc aagcgatagt aggccgaagt gaaaatcacg ccgacgatca gccaaagcgt
     1381 caggccgttg aacagcgccg cgagaatttc gacgcgatgg tacccgtaag tgctgtgatg
     1441 agtcgcgggc cgcttggcga cccggaaggc gaacaagctg agcgccaaag cgccgatgtc
     1501 ggaaagcata tggccggcgt cggacaacaa cgccaaactg ttggtgagaa aaccggcggt
     1561 caactcggca aagaaataga ccgaactgat gatcaaagcc catttcaacc gctgtgtttc
     1621 agtatgccgc gccatgcaat cgttgatcgt tgttaagtta cccccgcgcg gagaaaggct
     1681 caagacgcgt tgagaataat cccaaccgtc tctgtcccat cgctatttgc gcaccaagaa
     1741 atacagccgt ccctgccggt tcatgtatcc cgccagtgcg ccagcctgat cgcctgtgcc
     1801 aaaataataa tccgcccgct gcggcccgcg aatcgccccg ccggtatctt gattgagcac
     1861 gaaacgtgta accggccgcc atcccgccaa ttcaccttgt gggccgatga cggggatttc
     1921 cacctgcacc agcgccagcg cgccgcgtgg gaacaatcgt gaatcggtcg cgatggatcg
     1981 accggcggta accggcacgc cgagactgcc cagcgggccg ccttcatgca gacgaaagaa
     2041 aacataactc tcattgtagg caagtatctc atcctgctcg ccgggatttt ccactaagta
     2101 acggcgcagc cgctgcatcg acatttcctc tttagagact ttgccgccgt cgatcagcat
     2161 gcggccgatg ctgcgatagg gcaagccgtt gtgcgccgcg tagccgacgg tcacctcccg
     2221 gccatcacgc aagcgcaacc gacccgagcc ctggatatgg agaaagaaca aatcgatggg
     2281 atctttgacc caggcgattt cgagagcgcg gccgcgcagg gcgccgagct ggtcgatctc
     2341 gcggcgcgaa taatactgta ccggcaattg attctcgatc gtgccggggg ttttttcatc
     2401 gttcgcagcg ccgttggcgc cggcttgctc ctgccttggc aaatccgccg gcacaccgta
     2461 aatcgcatag tcgaatccgt cgcccggcgt caaactgccg tcgatcaccg gctgatagta
     2521 gccggtaaat agaacctccg cttgatcggc tgcggcgctc gatggaatga tttcgaaagc
     2581 cgcggcgatg gcgcgcgcca ggcaaccgcg gcaatgccaa tgatcgagca atcggtcgaa
     2641 tgcgatcaag gagtcgatca gctcccctgc cgtgaacggt cgcggctgct cgccgacgat
     2701 ccgttccgcc ggcaattttt ttagataacc aatgctgtgg ccgattgcca aacgcagcga
     2761 cgccacgtca agatcgtcgc tcagcgccgg ccacggcaca gtaaccggaa gcgcacagcc
     2821 ggccacggcg atggccatag cgacgcaccg aatcaattgt gagagcttgc agcgcagatc
     2881 catttacggg aaactcagcc gcggtgaatc atctagatat tcgcaaagaa gttgcccggc
     2941 tcatcgaccg gctgccgcgc caattccgcg agcaactgcg caacgtcgag ttcgtcgtcg
     3001 aagaccggcc atctgaggaa ctcctgctcg ccgaggagct ggaccctgaa gaagagactc
     3061 tctacggact gtaccagggc atcccgttgc cggaacgctc gagtctcgat ccgccgctct
     3121 tgcccgacaa gatcaccatc ttcgccgagc cccttctaga agacttcccc gaccccgaag
     3181 agctgcgcga agagatccgc ctcacggtac tacacgagat cgcccactac tttggcatgg
     3241 acgaagaaga catcgagaat ctggggtact gaagaagaca gagtcttgag acagagaccg
     3301 ccctcccctt tccccctctc atcccgccat ctcctgtctc ttatctatat ctctatctct
     3361 gctctgtcta gtcccggata tcctgtaaaa accactccgt cggcagctcc cgaccgacct
     3421 tggctttctt tgccagctcg accaccttgc cggcgcaggc ggcgaattgc agcccttggg
     3481 tgccggcgtt gatgaagaac gtcacctgct tattgttctg ccgtccgggg accttgccgg
     3541 agcgcacgtc catgaagtac ttgaaatagt cg
//
LOCUS       DATIRS010001242         2331 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1766386, whole genome shotgun sequence.
ACCESSION   DATIRS010001242 DATIRS010000000
VERSION     DATIRS010001242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2331)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2331
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1766386"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..667)
                     /locus_tag="VLM90_16025"
     CDS             complement(<1..667)
                     /locus_tag="VLM90_16025"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HSQ14534.1"
                     /translation="MANETIIYDKQNGVATITLNRPQALNAFVPQMNKEVLEALRDGE
                     RDKEVRCFMITGAGRAFCAGQDLKGRTPEQKGSLGASLREKYNPMIRQIRAMEKIVIA
                     AVNGVAAGAGCNFALACDLRVASEEAKFIQSFVRVGLAPDSGGSFILTRLVGLSKAME
                     LLLLGDTVDAKEAQRIGLVARVFPAAEFAASARAIAEQVAKAPRGIGLIKRAVNHANL
                     PNVE"
     gene            complement(718..1491)
                     /locus_tag="VLM90_16030"
     CDS             complement(718..1491)
                     /locus_tag="VLM90_16030"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HSQ14535.1"
                     /translation="MNYENVIVAKDGAIAVVTLNRPQALNALSYGLVKDLSLAMQELD
                     QDPDVRVMVVTGGDKVFAAGADIKEMADKGPFDAMVQERLAYRDKINKITKPVIAAVI
                     GFALGGGCELAMSCDIIVAAENARFGQPEVNLGIIPGSGGTQRLTHLLGKQRAMELVL
                     TGDMLSANDAERLGLVNRVVPAELCLEEALNIAKKIAAKPQLAVKAAKEAVLKSANTG
                     LDEGLEFERKAFYLLFASADRSEGMKAFLEKRKAEFTGR"
BASE COUNT          468 a          675 c          679 g          509 t
ORIGIN      
        1 cttcgacgtt gggtaaattg gcgtggttga ccgcgcgttt gatcaggccg atgccgcgcg
       61 gcgctttggc tacctgttcg gcaatcgctc gcgccgacgc tgcaaattcc gccgctggaa
      121 agacccgcgc caccaggccg atgcgctggg cttccttggc gtcaacggtg tcgcccaata
      181 ataataattc catcgctttg ctcagtccga ccagccgggt caggataaaa ctgccgcccg
      241 agtccggcgc caggccgacg cgcacgaagg attgaatgaa cttggcttcc tccgaggcca
      301 ctcgcagatc gcaggccaag gcgaagttgc agccggcgcc ggcggcaacg ccattgaccg
      361 cggcgatgac gatcttctcc atggcgcgaa tctgccggat catcggattg tacttttccc
      421 gcagcgacgc gcccaacgaa cctttttgct cgggtgtgcg gcctttcaaa tcctggccgg
      481 cacaaaaggc ccggcccgcg ccggtgatca tgaagcagcg aacttccttg tcccgttcgc
      541 cgtcgcgcag cgcttcgagc acttctttgt tcatctgcgg cacgaaggcg ttgagcgcct
      601 ggggccggtt gagcgtgatc gtcgccacgc cgttctgctt gtcgtaaatg atcgtttcgt
      661 tggccacttt agttgaattc cgttgttacc gtctcgggca gccacagggg gctgccccta
      721 cctgcctgtg aattcggctt tgcgcttttc gagaaatgcc ttcatgccct cgctgcggtc
      781 tgccgatgcg aacaatagat aaaatgcctt gcgctcgaac tccaagcctt cgtcgaggcc
      841 ggtgttggcc gatttcaaca ccgcttcctt ggcggctttg accgctagct ggggttttgc
      901 ggcaattttt ttggcgatgt tcagcgcttc ttcgagacag agttcagcgg gaaccacccg
      961 gttgaccagg cccaagcgct cggcgtcgtt ggcgctaagc atatcgccgg tgagcaccag
     1021 ctccatggcg cgctgcttgc ccaacaagtg cgtcagccgt tgggtgccgc cgctgccggg
     1081 aatgattccc aggttgactt cgggctggcc gaagcgggcg ttctcggcgg cgacgatgat
     1141 gtcgcagctc atcgccagct cgcagccgcc gcccagggca aagccgatca ccgcggcgat
     1201 caccggcttg gtgatcttat tgatcttgtc gcgataggcc aagcgctcct gaaccatggc
     1261 gtcgaagggg cctttgtcgg ccatttcctt gatgtcggca ccggcggcga agactttgtc
     1321 gccgccggtg acgaccatga cgcggacgtc gggatcctgg tcgagttcct gcatggccaa
     1381 cgaaaggtct ttgaccaggc cgtaggacag cgcattgaga gcttgcggac ggttcaaagt
     1441 aaccacggcg atggcgccgt ctttggcgac gatgacgttt tcgtaattca tcttatttga
     1501 gcttaaagac atacaccatg gcaagtgtcg attcaagaaa agcgccaccg agtggagcca
     1561 ctgagacaaa tccttttcac cacgaagtgt ttcatgatct tacgctcgtc tacagatcat
     1621 gaaaataccg taagccacct cccgaggttt cattccttag actcgtcatg ccggcgcagg
     1681 ccggcatcca ggggcgggag ggggatggat accggcctgc gccggtatga cggaacagag
     1741 agtcgttatc gatgcgcaga tcatcgctgc acgtgtatct tctaaggagg tcctagcgcg
     1801 gcaagccgca acgaaactcg gaatatctct cgcaaagacg caaaggccgg aaaggtgacg
     1861 ggcgatgccc gtcaccccga ggggacacga gggatcgagg aaagatttct cccaagggcc
     1921 gaaatgacaa cgagtccgaa cttggcgtct ttgcgccttg gtgagaggaa tttccgaatc
     1981 cgagaatatt cgactcccgg aatattaaag ccgtacgcta ggacaaacat gttggtgtta
     2041 gtttttggat agcaatgcaa tacgaagagc acgaagttcg gagaaataat tttctgcaac
     2101 cttcgtgtcc ttcgtgacct ccttcgaaaa tacacgtgca gcgatgatct gcgcatcgat
     2161 aacgactctc tgttccgtca taccggcgca ggccggtatc catccccctc ccgcccctgg
     2221 atgccggcct gcgccggtat gacgagtcta aggaatgaac ccagggaggg ggcttccggt
     2281 attttcatga tctgtagacg agcgcaagct catgaaacac ttcgtggtgg a
//
LOCUS       DATIRS010001243         1742 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1176464, whole genome shotgun sequence.
ACCESSION   DATIRS010001243 DATIRS010000000
VERSION     DATIRS010001243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1742)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1742)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1742
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1176464"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1662)
                     /locus_tag="VLM90_16035"
     CDS             complement(<1..1662)
                     /locus_tag="VLM90_16035"
                     /inference="COORDINATES: protein motif:HMM:NF014071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HSQ14536.1"
                     /translation="MSYAIAVDIGGTFTDLVAFDHETQKVLYAKSPTTYDNLVEGILD
                     CFNKAKIKPDEASLVNHGTTLVINSLIQRKGAKTALVTSKGFRDILEIARGNRPDPFD
                     LHYQRDEPLIPRELRLEVPERMGSKGEVVEPLDSAALKKLADEIKKLGVESVAVFFMN
                     SYINPAHEEAAAEKLKEFLPDTYVTFSTDLTREWYEYERCSTVAANAYVGPQVSTYIR
                     RLDNDLKRQGFGGSLFMMGSNGGLLSTDRTCRQPIGLVESGPIGGCIGASAYADKLGF
                     KNVVAFDMGGTTAKCALVENGRFSVNSLYYANGYVKGFPIKSAVIDIVEVGSGGGSIA
                     WIDSQNRLHVGPQSAGSTPGPVCYGRGGMDPTITDANLALGRLNPANFLGGEMKLDVR
                     AAQEVVAQRIAAPRGHAGESGLNQMADGIISIATVIMAGAIRKISVEHGLDPRDFVLF
                     SYGGGGPLHACALAHELSIPTVVIPPEPGNFSAVGMLLADARLDDSTTFTGLLDEDLV
                     ADMDRVFTGMEHAAAQALAADFGNAELRFERFDEMRYRGQRHNIKV"
BASE COUNT          348 a          519 c          526 g          349 t
ORIGIN      
        1 caccttgatg ttgtggcgct ggccgcggta gcgcatctcg tcaaaccgct cgaagcgaag
       61 ctccgcgttg ccgaaatccg ccgcgagcgc ctgcgcggcg gcgtgctcca tgccggtgaa
      121 cacccggtcc atgtcggcca ccaggtcctc gtccaagaga cccgtgaagg tggtcgaatc
      181 gtcgagccgg gcgtcggcca gcagcatgcc gacggccgag aaatttcccg gctcaggcgg
      241 gatgacgacc gttggaatgg acagctcatg ggccagcgcg caggcatgca gaggcccgcc
      301 gccgccgtag ctgaaaagaa caaaatcgcg cgggtcgagc ccgtgctcga cggagatttt
      361 tcgaatcgcc ccggccatga ttacggtggc gatagagata atcccgtccg ccatctgatt
      421 cagaccgctc tcgcccgcgt gtccccgagg tgcggcgatt cgttgtgcga ccacctcttg
      481 cgccgcgcgc acatcgagtt tcatttcgcc gccgagaaag tttgccggat tgagacggcc
      541 taacgcgaga ttcgcgtcgg taatcgtcgg atccatgccg ccgcggccat aacataccgg
      601 accgggagtt gaccccgcgc tttgcgggcc gacgtgcaaa cggttttgcg aatcgatcca
      661 ggcgatcgaa ccgccgcccg agccgacttc gacgatgtcg ataaccgccg acttgatcgg
      721 gaagcctttg acgtagccgt tggcgtaata cagggaattg accgagaagc ggccgttctc
      781 gaccagcgcg cactttgccg tagtaccgcc catgtcgaag gcgacgacgt ttttgaatcc
      841 caacttgtcg gcgtaggcgc tggcgccgat gcagccgccg atggggccgg attcgaccaa
      901 gccgatgggc tggcggcaag tgcggtcggt ggacagcaag ccaccattgg aacccatcat
      961 gaagagtgag ccgccgaagc cctggcgctt gagatcgtta tcgagtcgcc ggatgtaggt
     1021 gctcacttgc ggcccgacgt aggcgttggc cgccaccgtc gagcagcgct catactcata
     1081 ccactcgcgg gtaagatccg tgctgaaggt gacatacgta tccggcagaa attccttgag
     1141 cttctcggcc gcggcttctt cgtgggccgg gttgatatac gagttcatga aaaacaccgc
     1201 caccgactcg acgccgagtt tcttgatctc gtcggcaagt tttttcagcg ccgccgagtc
     1261 gaggggctcg acaacttcac ccttgctgcc catgcgctca ggaacttcga gacgcaactc
     1321 gcgcggaatc aacggttcgt cgcgctggta atgcagatcg aacggatcgg gccggttgcc
     1381 acgggcgatc tccagaatgt cgcgaaagcc tttgctcgtt accagcgccg tcttcgcgcc
     1441 tttacgctgg atcagcgaat tgatcaccag cgtcgtgccg tgattgacca gcgacgcttc
     1501 gtctggcttg atcttggctt tgttgaaaca gtcgagaatg ccctcgacaa gattgtcgta
     1561 ggtcgtcggg ctcttggcgt agagaacttt ctgcgtctcg tggtcaaacg caaccagatc
     1621 ggtaaaggta ccgccgatat cgacggcgat ggcgtaactc atttacaatt caaaaagtat
     1681 taaggatgag ggataaaggc tgagaaagtc gcggccgcga cagttctcat aattcatcct
     1741 tc
//
LOCUS       DATIRS010001244         5465 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_487813, whole genome shotgun sequence.
ACCESSION   DATIRS010001244 DATIRS010000000
VERSION     DATIRS010001244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 5465)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5465)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5465
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_487813"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            200..1228
                     /locus_tag="VLM90_16040"
     CDS             200..1228
                     /locus_tag="VLM90_16040"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ14537.1"
                     /translation="MEYFKFRCLMAVILFLISFVNYCGAQATDPKIVEAAKKEGGEIE
                     AYVTLRTDTAQYIWKMFEAKYPFVKVKQYKADSDKMLQRLATEYRAKKYLVDVLNFGG
                     GFHTQVLIEHGIAGAYLSPETKYFAPAFKEKSGLWTTLYYNPLTIVYNTKVLAPNERP
                     KDWFDLLHPRFKGRLAIEQEQVTWYAGMLKRYGVEKGKQFMQALAKHDPRPEQSSRGN
                     ALLAAGEFAAYIGRGHVAEMFKKKGAPVDWIKNPDPLVVQPATVQVAKHAPHPNSAKL
                     LIDFMLSEQVAELLAKEQRLPGRSNAAGLDPAFKEINAEKILPLSIEEVQANFRKYLE
                     EYRTYFGK"
     gene            1244..1627
                     /locus_tag="VLM90_16045"
     CDS             1244..1627
                     /locus_tag="VLM90_16045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14538.1"
                     /translation="MGKATDRAKTGSVTIATVRRREEARQVATRLEAAGIEWAIVEER
                     LTVPASGDRYRPGGIKVQVDRSDAKRAIELLREQHAAAPAPENRSFRVGAKRQAQAGG
                     WWRTALEAGAILALATLLAIGFFLG"
     gene            1652..2692
                     /locus_tag="VLM90_16050"
     CDS             1652..2692
                     /locus_tag="VLM90_16050"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14539.1"
                     /translation="MLDGKLRIAPTCYHVLHQVPVMTAHELNFFYDEGLKTADGSLGY
                     EILTDSMVPFGLEKLGISQAMKEKSVDIALDVQSRTVFYQRARGADLYVISGWRNQHT
                     NVWVAPPHIKSLKELKGKRVGISDFNSIRHWAIQIQLKKAGLDLEKDIEWVRIGVNSR
                     LHLDAIRSGKVECAPVPPWYAKELQAEGCNALVSPADQYPDGRPERIIAATGRILEER
                     PDLVKGFLKAMIRSYWFVRDMPKNYEYISNLEKRLRLRSPDPEERIVKHLRSAQDLEA
                     MTFPLDGRATGFEDMLKEEERLGELNYDVPAISDVVAQDLCDEAFRELRARKDLDEEF
                     QRLKVIEKRWGY"
     gene            2884..3828
                     /locus_tag="VLM90_16055"
     CDS             2884..3828
                     /locus_tag="VLM90_16055"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ14540.1"
                     /translation="MDGKIITFLVGSSAGGGTDVTARLIARHIERYLPGKPRIDVANK
                     PGAGGMIAANELYNLKKPDGLSISTLNTGALFATATANEAIKFDLQKFLWVGQAFDDA
                     QVLYLKTSTPYTSFDLIKKANREGKQPKMGAQALDHTSNVVVKIAEQIFGLDFTVIPG
                     YPGTPQILLDIERGALDGRAQGIGSLMSTRREWIKNGYIKILATSKRRRDARVPEVAS
                     MEEIAPAGSKGLLNALYAGQNLARSVVLPPGVPADRVKIWRDAFAAMTKDEAFNKEAE
                     KLGLEVELIRGEEMNRDIEGTLRDKRLMDLYRMIASAK"
     gene            3909..5345
                     /gene="glmL"
                     /locus_tag="VLM90_16060"
     CDS             3909..5345
                     /gene="glmL"
                     /locus_tag="VLM90_16060"
                     /inference="COORDINATES: protein motif:HMM:NF040745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylaspartate mutase accessory protein GlmL"
                     /protein_id="HSQ14541.1"
                     /translation="MSSIAILVDFGSTFTKVSAVDLASAQLLGRSQSPSTVLTDVREG
                     LLRALVSLHERHRLFDETPQDLSILNDKFVLASSSAAGGLRIVVVGNVPGLTVEAANQ
                     AALGAGAKVVGATAFKLNPTKLADLELLRPDMILLTGGVDGGDAATILHNAALLAQSS
                     LAVPIVVAGNRLAAEVVADLLRREGKEVLCVANVMPHAGKLDVEPAREAIRQIFMARI
                     TQAKGLDGLAGIVPVVLPTPMAVLEGVRLGAEGAAAEAGWGDMLVVDVGGATTDVHSI
                     GYGHAGGENVIVQSMAEAYAKRTVEGDLGIRYNAATIFERVGAATLLADLQRDFGHIA
                     VTGAMLHGYVEQIGHDTSTLPQADWHGAADAVLARAAVDIAIARHVGRRERIVAREGE
                     AWLHYGKDMRDTHTLIGTGGVFVHNPSAAFILAQREQSDDRVQALRPRQPRIYLDTSY
                     LLYAVGLLAQEYPSVGLRLFQQHMKQIG"
BASE COUNT         1166 a         1508 c         1694 g         1097 t
ORIGIN      
        1 tgtcggcgct ggcgcagttg tcgcgccggg aagagtttta tcaaccgctg gaagcggcgc
       61 gcgatcaggg cgggtggaag gcgttcttcg cgaagcgcga tgagccattt caaacgaata
      121 agaaatgagt tgggttggtt caagccgttc aaatagttca aaacgttcaa atcgtttcgg
      181 attgggaaag gagatgctga tggaatactt taagtttcgt tgcctgatgg cggttattct
      241 gtttctaatc tcctttgtta actattgtgg ggcgcaggcg accgacccga agatcgtcga
      301 ggcggcgaag aaggaaggcg gcgagatcga ggcctacgtc actttgcgga cggacacggc
      361 gcaatacatt tggaagatgt tcgaggccaa atatccgttt gtgaaagtga agcagtacaa
      421 ggctgacagc gacaagatgc tccaacgctt ggccacggag taccgcgcca agaagtatct
      481 cgtcgatgtg ctcaactttg gcggcggctt tcacactcaa gtattgatcg agcacggcat
      541 cgccggggcg tacctgtcgc cggagacgaa atactttgcg ccggcgttca aagagaagag
      601 tggtctgtgg acgacgctct attacaaccc gttgacgatc gtctacaaca ccaaagtgct
      661 ggcgcccaac gaacggccca aagattggtt cgatctttta catccgcgct tcaagggccg
      721 cttggccatc gagcaggagc aggttacttg gtacgccggc atgttgaagc gctacggcgt
      781 ggagaagggc aaacaattca tgcaggcctt ggctaaacat gatccgcgtc ccgagcagtc
      841 gtcgcgcggc aatgcgttgc tcgccgccgg cgagttcgcc gcctacattg gccgcggcca
      901 tgtcgcagag atgttcaaaa aaaagggcgc gccagtggac tggatcaaga atcccgatcc
      961 attggtcgtc cagccggcga cggtgcaggt cgccaagcat gcgccccacc cgaactcggc
     1021 caagctgttg atcgacttca tgttgtccga gcaggtggcg gaactattgg ccaaagagca
     1081 gcgcttgccg gggcgcagca acgccgccgg cctcgatccg gcgttcaagg agatcaacgc
     1141 cgaaaaaatc ctgcctctat cgatcgaaga ggtgcaggcc aactttcgaa aatatttaga
     1201 agagtataga acatatttcg gcaagtaacc gagcgggtgg acaatgggca aggcaacgga
     1261 tagagcgaaa accggcagtg tgacgatcgc cacggtgcgc cggcgcgagg aagcgcgcca
     1321 ggtagcgacg cggctggaag cggcgggtat cgagtgggcc atcgtcgaag aacggctgac
     1381 ggttccagcc agcggcgaca ggtaccgccc cggcggcatc aaagtgcagg tcgaccgcag
     1441 cgacgcgaaa cgggccatcg agctgttgcg cgaacagcat gccgccgcgc ctgcgccgga
     1501 gaatcgctcg ttccgtgtcg gcgccaagcg tcaggcgcag gcgggcggat ggtggcgcac
     1561 ggctctggaa gcgggcgcaa ttcttgcctt ggcgacttta ttggcgatag gattttttct
     1621 cggttaaaat tatttagaaa tgagaaacta aatgctcgat ggcaaactgc gtatcgctcc
     1681 gacctgttat catgtgctgc atcaagtgcc ggtgatgacc gctcatgaat tgaacttttt
     1741 ctacgacgag gggctcaaga ccgccgacgg ttctctcggc tacgaaattc tcaccgactc
     1801 gatggtgccg ttcggcttgg aaaagctcgg catctcccag gcgatgaagg aaaagtcggt
     1861 ggatatcgcc ctcgacgtcc agtcgcgcac ggtattttat cagcgcgctc ggggggcgga
     1921 tctctatgtt atctccggct ggcgtaacca gcacaccaac gtctgggtcg cgccgccgca
     1981 tattaagtcc ctcaaagaat tgaagggcaa gcgggtcggc atcagcgatt tcaacagcat
     2041 tcgccactgg gcgattcaga ttcagctcaa aaaggccggc ctcgatttgg agaaggacat
     2101 cgagtgggtg cgcatcggcg tcaactcgcg gctgcacctc gacgcgatcc gcagcggcaa
     2161 ggtcgagtgc gccccggtgc cgccctggta cgccaaggag ctgcaggccg aagggtgcaa
     2221 cgcgctggtg tcgccggcgg accagtaccc cgacggacgg ccggagcgca tcatcgccgc
     2281 caccgggcga attctcgaag agcgccccga cttggtgaag gggtttctca aagcgatgat
     2341 ccgttcctac tggtttgtcc gcgacatgcc gaagaactac gagtatattt ccaacctgga
     2401 aaagcgcttg cgtttgcgca gccccgatcc cgaagaacgt atcgtcaaac atttgcgctc
     2461 ggcgcaggac ttggaagcga tgacgtttcc gttggacggt cgcgccaccg gctttgaaga
     2521 tatgctcaag gaagaggagc ggctcggtga gctgaactac gatgtcccgg cgatcagcga
     2581 tgtggtcgcc caggacttat gcgacgaggc gtttcgcgag ctgcgggcgc gcaaggattt
     2641 ggatgaagag ttccagcgct taaaggtgat tgaaaaacgc tgggggtatt agcgcttcgc
     2701 gcgttcaaat agttcaagcc gttcaaaacg ttgaaatcgt tttggatcgg tcttcgtagc
     2761 cgcggctggt agataagtga gatgctaatg agagcgagaa attataaata ctttcaaatt
     2821 ctatcggtgc tattcctttg cgggggattg ttggaaattt aaaccgttca cgcgcaaacc
     2881 ttcttggacg gcaaaatcat cacgttcctg gtcggctcgt cggccggcgg cggcacggat
     2941 gtgacggcgc gcttgatcgc gcgccatatc gaacgctatt tgccgggcaa gccgcgcatc
     3001 gatgtcgcca acaaaccggg ggcgggcggc atgatcgcgg ccaatgagct gtacaatttg
     3061 aagaagcccg acggtctgag tatcagcacg ctcaacaccg gcgcgctgtt cgcgacggcc
     3121 acagcaaacg aagcgatcaa gttcgatctg caaaagtttc tctgggtcgg ccaggcgttt
     3181 gacgacgctc aggtgctgta tctcaagacg tcgacgccgt acaccagctt cgatttgatc
     3241 aaaaaagcta accgcgaagg caagcagccc aagatgggcg ctcaggctct cgatcacacc
     3301 agcaatgtcg tggtcaagat cgccgagcag attttcggct tggacttcac ggtgattccc
     3361 ggctatcccg gcacgccgca gattcttctc gacatcgagc gcggtgctct cgatggccgc
     3421 gctcagggca tcggctcctt gatgtcgacc cggcgcgagt ggatcaaaaa cggttacatc
     3481 aaaattttgg cgacctcgaa aaggcgccgc gacgcgcgag tcccggaggt cgcctcgatg
     3541 gaagagatcg cgccggcggg cagtaaaggg ctgctcaacg cgctatacgc cggacaaaac
     3601 ctcgcccgtt cggtggtctt gccgccgggc gtgccggcgg accgggtgaa aatctggcgc
     3661 gatgccttcg ccgccatgac caaagacgaa gccttcaaca aggaggctga gaaactcggc
     3721 ctcgaagtcg aattgatccg cggcgaagag atgaatcgcg acatcgaagg cacgctgcgt
     3781 gacaagcggc taatggatct ctaccgcatg attgcctcgg cgaagtgaag aaaggtaaaa
     3841 ggaaaaagta aaaaggtaaa attgtaatca tcatttttcg cctttttact tttacctttt
     3901 gacttgcttt gagttctatc gccattctcg tcgatttcgg cagcacgttt accaaagtca
     3961 gcgcggttga tctggctagc gcccagctgc tcgggcgcag ccaatcgcca tcgacggtgc
     4021 tcaccgatgt gcgcgaggga ttgttgcgcg cgttggtttc cctgcacgag cgccatcgtc
     4081 tcttcgatga aacgccgcag gatttatcga ttctcaacga taaattcgtt ttggcgtcga
     4141 gcagcgccgc cggcggcttg cgcatcgtcg tcgtcggcaa cgttcccggt ttgactgtcg
     4201 aagcggccaa tcaggcggcc ctcggtgccg gcgccaaagt cgtgggcgcg acggcgttca
     4261 agttgaaccc gaccaagctt gccgatctcg aactgctgcg ccccgacatg attttgctga
     4321 ccggcggcgt cgacggtggc gacgcggcga cgattctcca caatgcggct ctgctagcgc
     4381 agtcatccct ggcggtgccg atagtggtcg ccggcaatcg cctggcggcg gaggtcgtcg
     4441 cggatttatt gcggcgtgag ggcaaggaag tgctctgtgt cgccaacgtc atgccccacg
     4501 ccggcaagct cgacgtcgag ccggcgcgcg aggcgatccg gcaaatattc atggcgcgta
     4561 tcacccaagc caaggggctc gacggcttgg cggggatcgt gccggtggtg ttgccgacgc
     4621 cgatggcggt gctggaagga gtgcgcctcg gcgccgaagg cgcagcggct gaagctggtt
     4681 ggggcgatat gctggtggtg gatgttggcg gggcgaccac cgatgttcac tccatcggct
     4741 acggtcatgc cggcggcgag aacgtgatcg ttcaaagcat ggccgaagct tatgccaagc
     4801 gcaccgtcga aggagatttg ggcatccgat ataacgccgc cacgattttc gaacgagtcg
     4861 gtgcagcaac cttattggcg gatttacagc gcgacttcgg ccacatcgcg gtgaccggcg
     4921 cgatgctaca cggctacgtc gaacaaatcg gccatgacac cagcactctg ccgcaagccg
     4981 actggcatgg tgccgcggat gcagtgctgg cccgcgccgc ggtggatatc gcaattgcgc
     5041 gccatgtcgg ccggcgcgaa cggatcgtcg cccgcgaagg cgaggcgtgg ctgcattacg
     5101 gtaaagacat gcgcgacacg cacacgctga tcggcactgg cggcgtgttt gtccataacc
     5161 cgagcgcggc cttcattctc gcccagcgcg agcaatcgga tgaccgcgtg caggcgctgc
     5221 ggccgcgcca accaagaatt tatttggaca cgtcctatct cctctatgcc gtgggtttgc
     5281 ttgcccagga gtatccgtcg gtggggttgc ggctctttca gcagcatatg aaacagatcg
     5341 gttgagcggc tttcggtttc cgtgcgcttg atgtctcgcc agggatcgta gaaacctctc
     5401 tcgttcggac aatgtcaatg ttcgtcatgc cggcgcaggc cggcatccag acccatcatc
     5461 cacct
//
LOCUS       DATIRS010001245         2723 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1960481, whole genome shotgun sequence.
ACCESSION   DATIRS010001245 DATIRS010000000
VERSION     DATIRS010001245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2723
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1960481"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..325
                     /locus_tag="VLM90_16065"
     CDS             <1..325
                     /locus_tag="VLM90_16065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14542.1"
                     /translation="KRPMFIVGKPTWSHSALWYAGAIAHDAYHSKLYDDAKMRGGEQT
                     TDADAWTGAEAEKKCLAFQRQILAELNADETMLNYVDRCAENPGYQGRNRGWGSWLDY
                     LKRRW"
     gene            415..1305
                     /locus_tag="VLM90_16070"
     CDS             415..1305
                     /locus_tag="VLM90_16070"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HSQ14543.1"
                     /translation="MATNDKNYFDPKVLAGISNLALRARWVVEGMLSGVHKSRAKGFS
                     VEFEEHREYTPGDEIRRIDWKAFGKFDRYFIKEYEDETNLRAYLLLDGSASMDYASDG
                     ITKFDYGCTLTASLDYLILKQQDAAGVVTFSNRIESFVPPRAKRDYLLQILHALENRG
                     PAGETNVGKILDELAGQIKRRGLIILVSDLLDEPEPILKGLRQFRFKGNDVIVFHLLD
                     PAEMELPFDGNILFEDLETANLEVIADPRAIRATYKQVVQEFITEMRKQCHDSAIDYQ
                     LISTATPLDQALASYLSWRD"
     gene            1313..1771
                     /locus_tag="VLM90_16075"
     CDS             1313..1771
                     /locus_tag="VLM90_16075"
                     /inference="COORDINATES: protein motif:HMM:TIGR02226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BatA domain-containing protein"
                     /protein_id="HSQ14544.1"
                     /translation="MSVFFLYPLFLFGLAAASLPILIHLLNRRRLKRIRFPAVRFILL
                     SQKRISRSYRLRHWLLLALRTLAVVFLALLLANPIFQTGAGLFAGGGPVTLVILLDNS
                     LSMRWSGDGDGFKQAKEAAKLLISALDDGDRAALIPTNVSAKDVVRLKSQ"
     gene            1775..>2723
                     /locus_tag="VLM90_16080"
     CDS             1775..>2723
                     /locus_tag="VLM90_16080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14545.1"
                     /translation="MLLKDVDAIEIADGTADLPAALGKAYELLNQPAGQKEIRLITDM
                     ALTGWDQFSVGGLKQVDPSIPLKLIHVSGKPAPLNGSVKEVRLGGQGVGVNLPIQIET
                     SLVNFGASEIKDVLVQLSIDGQNKEQKLATIPPKGETSVSFQTRLSQAGAHSGQVTLK
                     KEGLAGNAVANFTLDAQDKLKVLIVDGDPQTSLAQSETFFLSRALNPTGERDASLFLP
                     TVILPDGLNTATLEGYQVVILCNVGLLPDGFVARLQSYLRQGGGLLVFAGDKVQTESY
                     NQKLAQVLPAQLTDKKLGPEAGGEKIDKLDLNHPALQMLA"
BASE COUNT          609 a          822 c          758 g          534 t
ORIGIN      
        1 gaaaaggccc atgttcatcg tcggcaaacc gacctggagc cactcggcgc tctggtacgc
       61 cggcgcgatc gctcacgacg cctatcattc caagctttat gacgatgcca aaatgcgcgg
      121 cggcgaacaa acgacggacg ccgacgcctg gaccggcgct gaggcggaaa aaaagtgctt
      181 agcttttcaa cgccagatac tggcagagct taatgccgac gaaaccatgc tcaattacgt
      241 cgatcgttgc gcggaaaatc ccggctacca ggggcgcaat cgcggctggg gaagctggct
      301 agattatctg aaacgccggt ggtagagagt aaacgcgagg atcgaagata gccgatggag
      361 gatttgcgat cctcgagctg ccatcctcca ttttcgacac ccaactgaaa gcgcatggcg
      421 accaacgaca agaattattt cgaccccaag gtcctggcgg ggatttcgaa tcttgctctg
      481 cgcgcccgtt gggtggtcga agggatgctg tctggcgtgc ataagagccg cgccaaaggg
      541 tttagcgtgg agttcgaaga acaccgcgaa tacacgccgg gcgatgagat ccgccgcatc
      601 gattggaagg ccttcggcaa gtttgaccgc tatttcatca aagagtacga ggacgaaacc
      661 aatctgcgcg cctatctcct gctcgatggc agcgcctcaa tggactatgc ctccgacggc
      721 atcactaaat tcgactacgg ctgcaccctg accgcgtccc tggactatct tattttgaag
      781 cagcaagacg ccgccggcgt cgtcaccttt tccaaccgca tcgagtcctt cgtgccgccg
      841 cgcgcgaagc gcgactattt attgcaaatt cttcatgctc tggaaaatcg cggccccgcc
      901 ggcgaaacca acgtcggcaa gatcctcgac gaactcgccg gacagattaa gcggcgcggt
      961 ttgatcatac tagtgtccga tctcctcgac gagccggagc cgattctaaa aggcctgcgc
     1021 cagtttcgct tcaagggcaa cgacgtcatt gtttttcatc tgttggatcc ggccgaaatg
     1081 gaattgccct tcgacggcaa tattttgttc gaagatctgg aaacggcgaa cctcgaagtg
     1141 atcgccgacc cgcgcgcgat ccgcgcgacg tacaaacaag tcgtgcagga attcatcacc
     1201 gagatgcgca agcagtgcca cgacagcgcc atcgactacc aactgatctc gacagcaacg
     1261 ccgttggatc aggcactggc cagttatctg agctggaggg actgaagcgt cgatgtcggt
     1321 tttctttctc tatcccttat ttctattcgg cctggccgcg gcctcgctgc cgatcttgat
     1381 tcatctgctg aatcgccgcc ggctgaaacg aatccggttc cctgccgtgc gcttcatctt
     1441 gctgtcgcaa aagcgcatct cgcgcagcta ccgtctgcgc cactggttgc tgcttgcgct
     1501 cagaacgctc gcggtggttt ttctcgccct cctgcttgcc aatccgatat ttcaaacagg
     1561 tgcgggcctg tttgccggcg gcggaccggt cacgttagtg atcctgttgg acaattcact
     1621 gagcatgcgc tggagcggcg acggcgacgg cttcaagcaa gccaaggaag cggccaagct
     1681 cttgatctcg gcgctcgatg acggcgaccg cgccgcgctg atacccacca acgtcagcgc
     1741 caaagacgtc gttcgactca agagccaata ggacgtgctg ctcaaagatg ttgacgccat
     1801 cgagatcgcc gatggcaccg ccgatttgcc ggcggccctg ggcaaagcct acgagctttt
     1861 gaaccaaccg gcgggtcaaa aagagattcg cctgatcacc gacatggcgc tcaccggctg
     1921 ggatcagttt tccgtcggcg gcttgaaaca ggtcgatccg tcgatcccgt taaaattaat
     1981 tcacgtcagc ggcaagccgg cgccgcttaa cggcagcgtc aaggaagtcc gcctcggcgg
     2041 ccaaggtgtg ggcgtgaact taccgattca aatcgaaacc tccttggtca acttcggcgc
     2101 gagcgagatc aaagatgtgc tcgtgcaact gagcatcgac ggacagaata aagaacagaa
     2161 gctcgccacc attccaccga aaggcgagac ctcggtgagt ttccaaacgc ggctcagtca
     2221 agcgggcgcg cacagcgggc aggtaacgct gaaaaaagag gggctcgccg gcaacgccgt
     2281 cgccaacttc actctcgacg cccaggacaa gctcaaggtg ctgatcgtcg acggcgatcc
     2341 gcaaacttcc ctcgcgcaaa gcgaaacgtt tttcttgagc cgggcgctca atcccaccgg
     2401 cgagcgcgat gcgtcgctgt ttctgccgac ggtcatcctc cccgacggtc tcaacacggc
     2461 tacgctggaa ggctaccaag tcgtgatcct gtgcaacgtc ggcctgctgc cggacggctt
     2521 cgtcgccaga ttgcaaagct atctgcgcca gggcggcggc ctgctcgtct tcgccggcga
     2581 taaagtccag acggaaagtt ataatcaaaa actcgctcaa gtcttgccgg cgcagctcac
     2641 ggacaaaaag cttggccccg aagccggcgg cgaaaaaatc gacaagctcg atctcaatca
     2701 tccggccctg caaatgctcg ccg
//
LOCUS       DATIRS010001246         2882 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_782780, whole genome shotgun sequence.
ACCESSION   DATIRS010001246 DATIRS010000000
VERSION     DATIRS010001246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2882
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_782780"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..513)
                     /locus_tag="VLM90_16085"
     CDS             complement(<1..513)
                     /locus_tag="VLM90_16085"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSQ14546.1"
                     /translation="MAIAQSLDHFVVPVDDLVIAEDFYARVFGGMVGKRNGLNVRQRK
                     RGAVPHTFVQIGGKRMGVYLQSDERPSPSSPRGLPTYSFTTTESGLKELSAELKQLGV
                     NCAGPVSNSHPFAEKTLFFTDPAGNHYAVYTPKDASAAANPATGRMTSVGYIELEAPD
                     VETSIKFYQNV"
     gene            complement(546..1682)
                     /locus_tag="VLM90_16090"
     CDS             complement(546..1682)
                     /locus_tag="VLM90_16090"
                     /inference="COORDINATES: protein motif:HMM:NF018234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HSQ14547.1"
                     /translation="MADKTGGDVFDRQQAESFLYPAKGLAGGGQLEVRMEVSPDHPDP
                     DIRGVARRVKFFNLESWHKEWTEVAKKNQDLAAAFEQENRQQTAHEFYLRAADFYRRA
                     VVYMPETDPRMLPTYIKLEENFAKAWRQVTPPFEQVEIPYEGHRLPALFWPGRGKPGT
                     KLPVVYNYGGADGILLRGEDGGAGQYVRRGMSFIDVDGPGHGGTLRHHKLYAPADSDR
                     VAKAVVDYLVTRADVDANRIGLHGSSMGGYSGPRCATVEKRIKAVAVWSGAYNLVDDI
                     FDYYPPIQDRLRWLIGAKDLKEGREKIKEFTLIGRADKIECPLLVGYSIDDRVMDPRG
                     ALNLYNNAVNSPDRSMLDGVGHGQKRFDRKTYIADWFMKQLQAG"
     gene            complement(1789..>2882)
                     /locus_tag="VLM90_16095"
     CDS             complement(1789..>2882)
                     /locus_tag="VLM90_16095"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GAF domain-containing sensor histidine kinase"
                     /protein_id="HSQ14548.1"
                     /translation="ASRGIDDRGWKSRTQNLDGAPHPVVRAKATVVISDLSVAADGLD
                     SSFFRDAGFNYYLGIPLIAKDDVIGVLSFYATQPHHYGGEELTFLRGLANHAAMAIHN
                     SELYEQTILQTRELEKANQIKEDFLSVMSHELRTPLNVITGYTKLVQEGLMGAVTAEQ
                     SKALGKVTHHADELLFMVNSIMHATKIEAGIVEAEKRQFRLSGFLDDLKALYDYPHGK
                     EIELRWQYPNDLAPIDSDQEKLKHVLQNLINNAIKFTDAGIVTVFVQPRPERNAVEFG
                     VSDTGIGISANELPHVFDRFRQADSSKTRTYGGVGLGLHIVKTFTELLGGVVTASSEP
                     NMGSTFTVLIPCDGKLRETVLAPNVKSHP"
BASE COUNT          542 a          798 c          891 g          651 t
ORIGIN      
        1 cacattctga taaaatttga tcgaagtttc gacgtcgggg gcttccagtt cgatatagcc
       61 gacgcttgtc atgcgacccg tggccgggtt ggcagcggcg ctggcatctt ttggagtgta
      121 cacggcgtaa tgattccccg ccggatcggt gaaaaatagc gttttctcgg cgaacggatg
      181 gctattgctg acgggtcccg cgcaattgac gccaagctgc ttgagctcgg cggacagctc
      241 ttttaacccc gattccgtgg tggtgaacga ataggtcggc aggccgcgcg ggctacttgg
      301 actcggccgc tcatcgctct gcagataaac gcccatgcgt ttgccgccga tctggacaaa
      361 ggtgtgcggc accgcgccgc gcttgcgctg gcgcacattg agcccgttgc gtttgccgac
      421 catgccgcca aagacccgtg cgtaaaaatc ctcggcaatg acgaggtcgt cgacggggac
      481 aacgaaatga tcgagggatt gagcgatagc catctagttc tccaatgctt gcctgttggc
      541 gtttctcacc cggcttgcag ctgcttcata aaccagtcgg cgatgtaagt tttacggtcg
      601 aatctttttt gcccatggcc gacgccgtcg agcatggagc ggtcagggga gttgacggcg
      661 ttgttgtaaa ggttcagcgc gccgcgcggg tccatgacgc ggtcgtcgat gctgtagccg
      721 accaacaaag ggcactcgat tttgtcggcg cggccgatga gggtgaactc tttgattttt
      781 tctcggcctt ctttcaaatc tttcgcgccg atgagccaac gcaggcggtc ctggatcggc
      841 ggatagtagt cgaagatgtc gtcgacgaga ttgtaggcgc cgctccagac cgcgaccgct
      901 ttgattctct tttcaacggt ggcgcagcgc gggccggagt agccgcccat gcttgagcca
      961 tggagaccga tgcgattggc gtcgacatcg gcgcgagtta ccagataatc gaccaccgct
     1021 ttggcgacac gatccgagtc ggcgggggcg tagagtttat gatggcgcag cgtgccgcca
     1081 tgaccggggc cgtcgacgtc gatgaacgac atgccgcggc gaacatactg gccggcgcca
     1141 ccgtcttcgc cgcgcaataa aatcccgtcg gcgccgccgt agttatagac caccggcagt
     1201 tttgttccag gcttgccccg ccccggccaa aacagcgccg gcagcctgtg tccttcatag
     1261 ggaatctcga cctgttcgaa gggcggcgtg acttgacgcc aggctttggc aaagttctct
     1321 tcgagtttta tgtaagtcgg cagcatgcgc ggatcggttt ccggcatgta gaccacggcg
     1381 cgccggtaaa agtcggcggc gcgcaggtaa aactcatggg ccgtctgttg ccgattctct
     1441 tgctcgaagg cggcggcgag atcttggttt ttcttggcga cctcggtcca ttctttatgc
     1501 cagctttcga gattgaagaa tttgacgcgc cgggcgacgc cccggatatc ggggtcaggg
     1561 tggtcaggcg aaacttccat gcgcacctcg agctgcccgc caccggccaa gcctttggcg
     1621 ggataaagaa aactctcggc ttgttggcgg tcgaagacgt cgccgccggt cttgtcggcc
     1681 atagtcgaac tccttgtgaa gggtcggaac ttgcaacgca ttcctgtttg cctcaggaag
     1741 gctgagattg caactcaaat tgcctgcggt accgcctcga tccagcagct acggatggga
     1801 tttgacattc ggcgccagga ctgtctcgcg cagtttaccg tcgcaaggaa tcagcacggt
     1861 gaaagtagaa cccatattgg gctcgctgct ggcggtgaca acgccgccca atagttcggt
     1921 gaaggttttg acgatgtgca atcccaagcc aacgccgccg taggtgcggg tcttcgaact
     1981 gtcggcctgg cgaaaacggt cgaagacatg cggcagttca ttcgcggaga taccgatgcc
     2041 ggtatcgctg acgccgaatt ccacggcatt gcgctcgggg cgaggttgga cgaatacggt
     2101 gacgatgccg gcgtcggtaa atttgatggc attattgatg agattttgca ggacatgttt
     2161 cagcttctct tggtcgctgt cgatcggtgc caggtcgttg ggatattgcc agcgcagctc
     2221 gatctctttg ccgtggggat aatcgtacag ggctttgagg tcatccaaaa agccactgag
     2281 ccggaactgg cgcttttccg cctcgacaat cccggcctcg atcttggtcg cgtgcatgat
     2341 gctattgacc atgaagagca actcgtcggc atggtgcgtc actttgccca gtgccttgct
     2401 ctgttcggca gtcaccgcgc ccatcagccc ttcctggacc agtttggtgt agccggtgat
     2461 gacgttgagc ggtgtgcgca gctcatgcga catgacgctc aagaaatcct ctttgatttg
     2521 gttggctttt tccaactcgc gggtctggag aatcgtctgc tcgtatagtt ccgagttatg
     2581 gatcgccatg gccgcatggt ttgccagacc gcgcagaaag gtgagttctt cgccgccgta
     2641 gtggtgcggc tgcgtggcgt agaacgacag gacgccgatc acgtcgtcct tggcgatcaa
     2701 cggaatcccg agataatagt tgaaaccggc gtcgcggaaa aagctgctgt ccagcccatc
     2761 ggcggccacg ctcaggtccg agatgacgac agtagccttg gcgcgtacca ccggatgggg
     2821 tgcgccgtct aagttctgcg ttcgggattt ccagccgcgg tcgtcgatgc cgcgcgaggc
     2881 ga
//
LOCUS       DATIRS010001247         2415 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1078358, whole genome shotgun sequence.
ACCESSION   DATIRS010001247 DATIRS010000000
VERSION     DATIRS010001247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2415
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1078358"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            159..1313
                     /locus_tag="VLM90_16100"
     CDS             159..1313
                     /locus_tag="VLM90_16100"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HSQ14549.1"
                     /translation="MALSVAENELITRVGPGTPGGEMMRRYWHPIGFASELKGRPLRR
                     RLLGEDLVLVRDDHGKLGLLTLRCPHRGTSLEFGHVEDGGLRCCYHGWLFNTEGRILQ
                     MPGEAADGTYKDRIKQKAYKLEELGGMLFAYLGPEPAPLLPRWDVLVRQDGVRAMAGR
                     VMHCNFLQAVENSVDQHHFKWLHRTPKTSLWSGETWTSDPFEFGIKATFTRTVSAGSF
                     MTKSFFLFPNMNKVGYHLSEDHPAAFAATHEGYEALRWRVPADDTNTMHFTLYFAPIV
                     NGKVTAKIPKDQSAEGLGDSVLGKYRWDDETGWIARGDQDRCAQESQGPIFDRSGEHL
                     GVSDEGLIQLRRMFRECIEAVQNGKDPIGVIRDPAKNEMITIVPGEIQVA"
     gene            1521..>2415
                     /locus_tag="VLM90_16105"
     CDS             1521..>2415
                     /locus_tag="VLM90_16105"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ14550.1"
                     /translation="MSLALAALIFLNAPYLHAQDTLDSLIAGAKKEDELVFIAGTSTF
                     GGRKGLADLEAAFNKRFATKMKISFAAGPDMNARAARHITEIKSGRKVSSDIFLGSQS
                     HQALMHKENDLEKVNYSGLFSWVSKEMEIFPGETVLTYTSPNGIVYNKDLIPKDKAPK
                     NYADLVDPKLSQAWAGKIAIPPYVAWLAELSLVWGTEKVKDFTRKLVAISAGRLRYSE
                     EERVVSGEFPIMANFGDALSAMWTWQPKGAPLVAVPGVTPINTDYFQLSAPKNAPHPN
                     LAKLFVAFMATREAQTILQKHE"
BASE COUNT          562 a          711 c          674 g          468 t
ORIGIN      
        1 gttgggacga tgccatcaac atccatggca ctcaactcga aagtgtccaa actacccatt
       61 tgtcatgccg gcgaaagccg gcatccattc gaaatgatgc cgcgtgatcg cgcagaatct
      121 ggattccggc tttcgccgga atgacgaaag gaattcccat ggccctcagc gtagctgaaa
      181 acgaactgat cacccgcgtc ggccccggca cgccgggcgg cgagatgatg cggcgctatt
      241 ggcatcccat cggttttgcc agtgaactta aggggcggcc attgcgccgg cggctgctcg
      301 gcgaagattt ggtcctggtc cgcgacgatc acggcaagct cggccttctg acgctgcgtt
      361 gcccgcaccg tggcacgtcg ttggagttcg gccatgtcga agacggcggc ctgcgctgct
      421 gctaccatgg ctggctgttc aacactgaag ggcgaatttt gcaaatgccc ggcgaggccg
      481 cggacggcac ctacaaagac cgcatcaagc aaaaagccta caagctcgaa gagctgggcg
      541 gcatgctgtt cgcctatctc ggtcctgaac cggcgccgct cctgcctcgt tgggatgtcc
      601 tggtgcgcca agacggcgtg cgcgccatgg ctgggcgggt gatgcattgc aatttcttgc
      661 aggcggtgga gaacagtgtc gaccagcacc atttcaaatg gctgcaccgc acgcccaaga
      721 caagcttatg gtcaggggaa acatggacat ccgatccgtt tgaattcggc atcaaagcga
      781 ccttcacgcg caccgtcagc gccggctcgt tcatgaccaa aagctttttc ctgtttccca
      841 acatgaacaa ggtcggctat cacctgagcg aagatcatcc cgccgccttc gccgccaccc
      901 acgaaggcta cgaagcgctg cgctggcgcg tgccggcgga tgacaccaac accatgcact
      961 tcacactcta cttcgcgccg attgtgaacg gtaaagtcac ggcgaaaatc cccaaggacc
     1021 aatccgccga aggcttgggc gatagcgtgc tcggcaaata ccgttgggac gacgagaccg
     1081 gttggatcgc ccgcggcgat caagaccgct gcgctcaaga aagccaggga ccgatcttcg
     1141 accgcagcgg cgagcatctc ggcgtctccg acgaaggctt gattcaattg cgccgcatgt
     1201 tccgggaatg catcgaagct gtgcaaaacg gtaaagaccc gatcggtgtc atccgcgatc
     1261 cggcaaagaa tgaaatgatc acaatcgtac ctggagaaat tcaagtcgcg tgaaagccaa
     1321 acccgatgac gtcaattctc ctgaacgtca taccggcgaa agccggtatc cagcggtggt
     1381 gaagccgccg ctcgaatcta gattccggct tccgccggaa tgacgaaggg agagccaatg
     1441 cagcgattgg aatctggata tgaacgttta gctaccattc ggaggggagc atgagccaat
     1501 tacttgatag gatttctcgc gtgagcttag cgctagctgc attgatattc ctgaatgcgc
     1561 catatctcca cgcccaagac accttggact cgctcatcgc tggagccaag aaagaagacg
     1621 agctcgtgtt tatcgccggc acatcgacct tcggcggtcg caagggtttg gccgatctcg
     1681 aagcggcgtt caacaaacgc ttcgctacca agatgaaaat cagcttcgcc gccggcccgg
     1741 acatgaacgc ccgcgcggcg cgccatatca ccgagatcaa atcagggcgc aaagtgtctt
     1801 cggatatctt cctcggttct cagtcgcatc aggcattgat gcacaaagaa aatgacctag
     1861 agaaggttaa ttactcggga ctgttttcct gggtcagcaa agaaatggaa atctttcccg
     1921 gtgaaaccgt actgacctac acttctccca acggtatcgt ctacaacaaa gatttgattc
     1981 ccaaagataa ggcgcccaag aactatgccg acttggtgga cccgaagtta agccaggcct
     2041 gggccggcaa aatcgccatt ccgccctatg tcgcttggct cgccgagctt tccctggtct
     2101 ggggcactga gaaagtgaag gacttcaccc gcaaactcgt ggcgatcagc gctggtcgct
     2161 tgcgctacag cgaagaagag cgggtggtca gcggcgaatt tccgattatg gcgaacttcg
     2221 gcgacgcatt gagcgccatg tggacgtggc agcccaaggg ggcgccgctg gtcgctgtcc
     2281 ccggagtgac gccgatcaat accgattact ttcaattgag cgcgcccaaa aatgcgcccc
     2341 accccaacct cgccaagctc ttcgtcgcct tcatggcgac gcgagaagcc cagacgatcc
     2401 tgcaaaaaca tgaat
//
LOCUS       DATIRS010001248         2392 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1570222, whole genome shotgun sequence.
ACCESSION   DATIRS010001248 DATIRS010000000
VERSION     DATIRS010001248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2392)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2392)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2392
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1570222"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..852
                     /locus_tag="VLM90_16110"
     CDS             <1..852
                     /locus_tag="VLM90_16110"
                     /inference="COORDINATES: protein motif:HMM:NF013706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HSQ14551.1"
                     /translation="YLRAVENAAAADQLAAATLGSDMVEFLKRGDKALAAARMAIKHA
                     ATDGGNGNVVERQRVRLMAPVPRPGALVSAGKNFSDHVAEMSSKKGPAAPVAFLKLPG
                     SVIGPDDDIPHPPEVKNLDYEVELAVIIGKPCVDVSEDQALNYVAGYASFNDISARDI
                     IRGENKSGIHLMGKSFPGFAPMGPYLVTADEVPEPQSLKLWLRVNGEARQDSNLGYMI
                     FRIRDMIAYWSQMGLNPGDVLTTGTPRGVAAGRKPDQAPWWLKPGDLVEAEVEGLGCL
                     RNRIVAE"
     gene            895..1767
                     /locus_tag="VLM90_16115"
     CDS             895..1767
                     /locus_tag="VLM90_16115"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSQ14552.1"
                     /translation="MSAATNSVLKPTGLVHGHTEVRFLDDTIPVLTKVLGLDLLERRD
                     REAVLKHPNTGWKLIVHEGGAEVKDKPERNHYGVRVANNLEVDHAYQYLLANKATLGL
                     TKVVKRKERAGSYSMFFVEPGGNYWEIESYENRHKAGLPYEVAYPWKTVLAEERLPGC
                     GYVPQAMTHGTMECTDLQASKKFYQQGLGLDVITHVPTIEPHDIKHPTTPWYVVSLEV
                     PPKNKHYLTPLQRYTVAVESSAALTEANREFTERRDEFGLTAIEAVRDSRAGQSFQIC
                     DLDRNWWEVAYIAS"
     gene            1919..>2392
                     /locus_tag="VLM90_16120"
     CDS             1919..>2392
                     /locus_tag="VLM90_16120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14553.1"
                     /translation="MKHYNANWLLVVHESGADVADKPFRNHYGVRVKNNEQVDRACDY
                     LMAKKDRLGLKKVVMRTERAGSYSVFFVEPGGNYWEIESYEHRHQAGLPYDVSYPWQS
                     ELSEKAFPGRGYIPHGFTHGTIEYTDWAASVKFYKDGLGMDVITHVQTTKPHNIKH"
BASE COUNT          547 a          753 c          659 g          433 t
ORIGIN      
        1 tatctgcgcg cggtggagaa cgccgcggcg gcggatcagt tggccgctgc caccctcggc
       61 agcgacatgg tcgaattttt gaagcgcggc gacaaagcat tggcagcagc ccgcatggca
      121 atcaaacatg ctgcgaccga cggcggtaat ggcaacgtcg tcgaacgcca gcgcgttcgc
      181 ctgatggcgc cggtgccccg tcccggcgcg ctggtctccg ccggtaaaaa cttttccgat
      241 cacgtcgccg agatgtcgtc taaaaaaggg ccggcggcgc ctgtcgcttt tcttaaactt
      301 cccggctcag tgatcggtcc cgatgacgac ataccccatc cgcccgaagt gaaaaatttg
      361 gattacgaag tcgagctcgc cgtcatcatc ggcaagccct gcgtcgacgt cagtgaggat
      421 caagccttga actatgtcgc cggctacgcg tcgtttaacg acatcagcgc ccgcgacatc
      481 attcgcggcg agaacaagag cggcatccac cttatgggta aaagcttccc cggcttcgcc
      541 cccatggggc cctatctggt caccgccgac gaagttcccg agccgcaaag cttaaaactc
      601 tggctgcgcg tcaacggcga ggcgcgccag gactcaaacc tgggctacat gattttcaga
      661 atccgcgaca tgatcgccta ctggtcgcag atgggtttaa atcccggcga cgtgctcacc
      721 accggaacgc cgcgcggcgt cgccgccggc cgaaaacccg accaagcacc ctggtggcta
      781 aaacccggcg acctggtcga agccgaagtc gaggggctcg gctgcttgcg caaccgcatt
      841 gtcgcggaat gaggtttacc tttcgatgag tgtccgaata gctgaggaac gaatatgagc
      901 gctgcgacga attcagtcct taaacccacc ggcctggtgc acggccacac cgaagtccgc
      961 tttctcgacg acactattcc cgtgctgacg aaagtgctgg ggctcgatct gctcgaacgg
     1021 cgcgatcgtg aagcggtctt gaaacatccc aacaccggct ggaaattaat cgtccacgaa
     1081 ggcggcgccg aggtcaaaga caaacccgag cgcaaccact acggcgtgcg cgtggccaac
     1141 aacctagagg tcgaccacgc ctaccagtac ctcctcgcca acaaagcaac cttgggcctc
     1201 actaaagtcg tcaaaaggaa agagcgcgcc ggttcctact cgatgttttt cgtcgagccc
     1261 ggcggcaact attgggagat cgagtcctat gaaaatcgcc acaaggccgg tctgccctat
     1321 gaggtcgcct acccttggaa aaccgtgctc gctgaagaac gcttgccggg ctgcggctac
     1381 gtgccgcagg cgatgaccca tggcaccatg gagtgcaccg atctccaagc atcgaagaag
     1441 ttttatcagc aggggctggg tctcgatgtc atcacccatg tgccgaccat cgaaccgcat
     1501 gacatcaaac atccaaccac gccctggtat gtcgtgagct tggaagtgcc gccgaaaaac
     1561 aagcactatc tgacgccgct gcagcgttac accgtagctg tcgagtcgtc tgccgctctt
     1621 accgaagcca atcgggaatt caccgagcgc cgggatgagt tcggcctgac cgccatcgaa
     1681 gcggtccgag acagccgcgc cggccagtcc tttcaaatct gtgacctcga ccgcaactgg
     1741 tgggaagtcg cctacatcgc aagctagcca tgaaactgtc taataccggg gcgacccgac
     1801 cgatcggtct gcgctcatca agaaccgcga cgcccgcccc tacctcgacc agaccgtccc
     1861 ggtattgtcg gaattgctcg ccctgcaggt cgttgcaagg gacgataaag aagtaccgat
     1921 gaaacattac aacgccaact ggctgctggt cgtccatgaa agcggcgccg acgtggcgga
     1981 caaaccgttt cgcaaccact atggcgtgcg cgtgaagaac aacgagcagg tcgaccgcgc
     2041 ctgcgattac ttgatggcga aaaaagaccg tctcggttta aagaaagtcg tcatgcgcac
     2101 tgagcgcgcc ggttcgtatt ccgtcttttt cgtcgagccc ggcggcaact actgggagat
     2161 cgagtcctac gagcaccgcc atcaagcggg tctgccttac gatgtctcct atccgtggca
     2221 gagcgaactc agcgaaaaag ctttccccgg cagaggctac atcccccacg gcttcaccca
     2281 cggcacgatc gaatacaccg actgggcggc gtcggtaaaa ttctacaaag acggcctcgg
     2341 catggatgtc atcacccatg tgcaaaccac caagccgcac aatatcaaac at
//
LOCUS       DATIRS010001249         2622 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1275639, whole genome shotgun sequence.
ACCESSION   DATIRS010001249 DATIRS010000000
VERSION     DATIRS010001249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2622)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2622)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2622
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1275639"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..442)
                     /locus_tag="VLM90_16125"
     CDS             complement(<1..442)
                     /locus_tag="VLM90_16125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14554.1"
                     /translation="MRDVTIVVGTIGQSIMRSEDNGQTWARIGPRRGFAYEASVRCIA
                     MNPQQHNILFAGTERGLYRSADGGANWQYLDSALNPHYVWAIGIDPVNPDNMFVGTGT
                     PTPAMLFRSKDGGRSYDKRPVEVATECEAVGTPRFTGIAVDPVEP"
     gene            complement(498..1478)
                     /locus_tag="VLM90_16130"
     CDS             complement(498..1478)
                     /locus_tag="VLM90_16130"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HSQ14555.1"
                     /translation="MDYVQFGSTEFKVSRLALGCMSMSGAYGPADDNESIATLHKAFD
                     LGINFLDTSASYGQGHNHELINKALQGRRERIVIHSKSGSPRTPDATGSRSGSTPEYL
                     TQNCEQSVKRLGIDALDIFCMSRVDPDIPVEESVGAMAKLVERGLTRYIGLSEASANS
                     IRRARKVHPIVSLQMEYSLWSRDPEGGNVQACREFNMGFMAYSPLGRGFFGGAVHDAK
                     DMSDGDGRINHPRFQGDNLAKNLALLARFEELAREKHCTPAQLALAWLMAQGSDVIPI
                     PSNKTRAHLEENIKATTITLTKEDLARLDAIFPPGAAAGPRTKDMHRVNV"
     gene            complement(1534..2562)
                     /locus_tag="VLM90_16135"
     CDS             complement(1534..2562)
                     /locus_tag="VLM90_16135"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ14556.1"
                     /translation="MHSFGFIFLVIFSSVALADAQAPYHQGKTVRLIVSSTAGSNYDL
                     YGRLVAQYIGKHIPGKPEVVVQNMPGGGNIVGANYIYAVAKPDGLTFGTVNAALYFNQ
                     LGGNKDVQFDWSKYIYVGSPDRSEDLMYLRSDAPFKTVADVRKAVEGPKCGSTGTGTT
                     SHYLPTLLNDGIGTKFHVVTGYPGGPEIDLAVERNEVQCRAFTIAGWFTGDLYANWRK
                     TGFARAVVQSHRKRDARLADVPTVYELLDEFKAPEQIKKLASLLIASNSFGRPYVLPP
                     ATPPEYVKILRESFMRTLNDPELLADAKRRRIDIEYTSGEELDRLAKEVITKDTEVIE
                     RMKKLLGK"
BASE COUNT          526 a          804 c          725 g          567 t
ORIGIN      
        1 tcggctccac cggatcgacg gcgatgccgg tgaacctcgg cgtgccaacc gcctcgcatt
       61 ccgtcgccac ttccaccggc cgcttgtcat agctgcggcc gccatccttc gaacgaaaca
      121 gcatcgccgg cgtcggcgtg ccagtgccta cgaacatgtt atccggattc accggatcga
      181 tgccgatcgc ccagacatag tgcggattga gcgccgagtc gaggtactgc caattggcac
      241 cgccgtcggc gctgcgatag agcccgcgct cggtaccggc aaagagaata ttgtgctgct
      301 gcggattcat cgcgatgcag cgcaccgaag cctcgtaggc aaatccccgc cgcggcccga
      361 tgcgcgccca agtctggcca ttgtcttcac tgcgcatgat gctttgtccg atggttccga
      421 caacgatggt tacgtctcgc atatttcctc ccaagacgac ttgaacgttt tgaacggctt
      481 gaacgattta aacgagtcta tacgttgacc cgatgcatat ccttggtccg cggtcccgcc
      541 gccgctcccg gcggaaagat tgcatcgagc cgggctagat cttctttggt caacgtaatc
      601 gtcgtcgctt tgatgttctc ttctaaatgc gcccgcgtct tattgctggg gatcggaatc
      661 acgtcgcttc cctgagccat caaccacgcc agcgccagtt gcgccggcgt gcaatgcttc
      721 tcgcgggcca gctcttcgaa gcgcgccagc agcgccagat tctttgccag attgtcgcct
      781 tgaaatcgtg ggtgattgat ccggccgtcg ccgtcgctca tgtctttggc atcatgcaca
      841 gcgccgccga aaaagccgcg accaagcggc gaataggcca tgaagcccat gttgaattcg
      901 cggcaggcct gcacgttgcc gccttcggga tcgcgcgacc acagcgaata ttccatctgt
      961 agagaaacga tcggatgaac cttgcgcgcg cgccggatcg agttggcgct cgcttccgaa
     1021 aggccgatat agcgagtcag gccgcgctcc accagtttcg ccatggcgcc caccgactct
     1081 tcgacgggaa tatccggatc gacccgcgac atgcagaata tatcgagggc gtcgatcccc
     1141 aaccgcttca cgctttgctc gcagttttgg gttaaatatt ccggcgtgct gccgctgcga
     1201 ctacccgtgg catccggagt gcgcgggctg ccggatttgg agtgaatgac gatgcgctcg
     1261 cgccgccctt gcagcgcctt gttgatcaac tcatggttgt gaccctggcc atagcttgcc
     1321 gaggtatcga gaaagttgat gccgagatca aacgccttat gcagcgtcgc gatcgattcg
     1381 ttatcgtccg ccggcccata ggcgccagac atactcatgc agcccaaagc caagcgcgag
     1441 actttgaatt ccgtcgagcc gaattgaacg taatccatgc ttcctccgta ctgaggtcag
     1501 agttacctta ggtcgacgga ccaagtcaaa ccgctatttc cccaacaatt tcttcatccg
     1561 ttcgatcact tcagtgtctt tggttatcac ttccttggcg agccgatcga gctcctcgcc
     1621 ggaagtgtac tcgatgtcga tgcggcgccg cttcgcgtcg gctaagagtt ccggatcatt
     1681 gagcgtgcgc atgaacgatt cacgcaggat ctttacgtac tcggggggcg tcgccggcgg
     1741 aagcacatag ggacggccga aggaattgga cgcgatcaac aaactcgcca gcttcttgat
     1801 ctgctccggc gctttgaact catcgagtag ctcatagact gtcggcacgt cggcgagccg
     1861 cgcatcgcgc ttgcgatggc tctgcaccac ggcacgggca aagccggtct tgcgccagtt
     1921 ggcgtagaga tcgcccgtga accaaccggc gatggtgaag gcgcggcact gcacttcgtt
     1981 gcgctccacc gccagatcga tttccggtcc gcccggataa ccggtgacga catggaactt
     2041 cgtgccgata ccgtcgttca atagcgtcgg cagatagtga ctggttgtgc cagtgccggt
     2101 cgagccgcac ttcggacctt caacagcctt gcgcacgtca gctacagtct tgaacggcgc
     2161 gtcgctgcgc aggtacatca gatcttcaga gcgatccggg ctgccgacgt aaatatattt
     2221 cgaccagtcg aactggacat ctttgttgcc gcccagttga ttgaagtaca gcgccgcgtt
     2281 aacggtgccg aacgtcaagc cgtcgggctt ggccaccgcg taaatatagt tcgcgccgac
     2341 aatattgccg ccgcccggca tgttttgcac gaccacttca ggctttccag gaatgtgctt
     2401 gccgatatat tgcgccacca atcggccata aaggtcgtag ttactacccg ccgtgctgct
     2461 gacgatcaac cgaaccgtct taccttgatg gtacggcgcc tgggcatcgg ccagcgccac
     2521 cgacgaaaaa atcactaaga aaatgaagcc gaatgaatgc atcgtgtgct ccttattgcg
     2581 cgtggaccct tacagcaaag tctcctaaca agattgacag cg
//
LOCUS       DATIRS010001250         1997 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_488443, whole genome shotgun sequence.
ACCESSION   DATIRS010001250 DATIRS010000000
VERSION     DATIRS010001250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1997
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_488443"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..850
                     /locus_tag="VLM90_16140"
     CDS             <1..850
                     /locus_tag="VLM90_16140"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HSQ14557.1"
                     /translation="TYEAVIDLVYDNFPYKHSTIGSMEDLNAATLDDALAFFRTYYAP
                     NNAVLSMVGSFKTDAALALIKKYFENIPAQPAPAPADMNEPEQQAERRKTVEDGFAQT
                     PRLDIVFKIPPANTPDWYALEMLGQVLSSGVSSRLYQKFVKEKEMALSVYADAEEKRG
                     PSLFWFSLMARPTTDLGALEKLLYEEILRIQKSPVEDSELNKVRMQMRRQRAQQLYST
                     RSRANSLGHFAVYYNDPGLINKVWARYEQITKADIQRVAQKYFTDSNRTVVTTLPKAA
                     AAPSGG"
     gene            872..>1997
                     /locus_tag="VLM90_16145"
     CDS             872..>1997
                     /locus_tag="VLM90_16145"
                     /inference="COORDINATES: protein motif:HMM:NF012879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HSQ14558.1"
                     /translation="MAKFHRIFCTVVALAIGLTLAPAAVRGQEGAAMPPAKVERKNRA
                     PVARDILTLKLPRPVEAKLKNGLTVLIVEDRRAPYVSVQLHVGGAGGLFEPTALTGLA
                     SVTAQMLREGTKTKNSVQLAEYVDRLGASIGASSSFGSSDTVLSAAGLSDNFDDWMGI
                     AFEILLQPSFAADELEKLKQRLRVQLREQRSNANFLLSERFNRAVYGDHPAANVSVTA
                     ESLDRLTPDGLRQWHRERYAPQNAILGIAGDVRAKDLIAKLEKLLAGWKKTELKPILP
                     RDPQAASARKVFLVHRPNSVQTTVSLGNIAIDRRSPDYMPMVVMNDIIGGGASARLFL
                     NLREEKGYTYGVYSDFTAVRYPGPWRAGGNMRTEVTEGAMA"
BASE COUNT          415 a          599 c          606 g          377 t
ORIGIN      
        1 aacctacgag gcggtgatcg atctggtcta cgacaatttc ccctacaaac attcgaccat
       61 cggctccatg gaggatttga acgccgcgac gctagacgac gccttggctt tttttcgcac
      121 gtactacgcg cccaacaatg cggtgctgtc gatggtcggt agtttcaaaa ccgatgccgc
      181 cttggcattg atcaagaagt atttcgagaa tattccggcg cagccggcgc cggcgccggc
      241 tgacatgaat gagccggagc agcaagccga gcggcgcaag actgtcgaag acggtttcgc
      301 gcaaacgccc cgcctcgata tcgtgttcaa aattccccca gccaatacgc cggattggta
      361 cgccttggaa atgctcgggc aggtcctttc cagcggcgtg tcctcgcggc tgtatcagaa
      421 gttcgtcaag gaaaaagaaa tggccttgag tgtctatgcc gacgccgagg agaagcgcgg
      481 gccgtcgctg ttctggttca gcttgatggc gcggccgacc accgacttgg gcgccctgga
      541 gaaactgctc tacgaagaga tcctgcggat tcaaaaaagc ccggtggaag attcggagtt
      601 aaataaagtc cgcatgcaga tgcgccgcca acgggcgcag cagctctaca gcacgcggtc
      661 gcgggctaac tcgctgggcc atttcgccgt ctactacaac gatcccggtt tgatcaacaa
      721 ggtttgggcg cgttacgagc agatcaccaa ggccgatatt caacgcgtcg cgcaaaaata
      781 tttcactgac tccaaccgta cggtggtcac caccctgccg aaggcggccg cggcgccgag
      841 cggcggttga acggctaaca tgagtaaatc gatggcgaaa tttcatcgca ttttttgcac
      901 cgtcgttgcc ctcgcgattg gcttaaccct ggcaccggca gcggtgcgcg gccaagaagg
      961 cgcggcgatg ccgccggcca aagtcgagcg caagaaccgc gcgccggtgg cgcgggatat
     1021 tctcaccttg aaacttccca gaccggtgga agccaagctc aaaaatggcc tgacggttct
     1081 aattgtcgaa gatcgccgcg ctccctatgt cagcgtgcag ctgcatgtcg gcggcgcggg
     1141 cggtttgttt gaaccgacgg cgctgaccgg cttggccagt gtcacggcgc aaatgctgcg
     1201 cgaggggacg aaaaccaaga acagcgttca gctcgcggag tatgttgacc ggctgggcgc
     1261 gtccatcggc gccagctctt cgttcggctc ttcggacacg gtgctgagcg ctgccggtct
     1321 cagtgataac tttgacgact ggatgggcat cgctttcgag atcctgctgc aaccgagttt
     1381 tgccgcggat gagttagaga agctcaaaca acggttgcgg gtgcagctgc gcgagcagcg
     1441 ctccaacgct aatttcctct tgagcgaacg tttcaaccgg gccgtctacg gcgaccatcc
     1501 ggcggccaat gtctcggtga cggcggagtc tctcgaccgg ctcactccgg acgggctgcg
     1561 ccagtggcac cgcgagcgct atgcgccgca gaatgcgatc ctcggcatcg ccggcgatgt
     1621 tcgcgccaag gatctcatcg ccaaactaga aaagctgctc gccggttgga aaaagaccga
     1681 gctcaaaccg atcctgccgc gcgatccaca ggccgcgagc gcgcgcaaag tgtttctcgt
     1741 ccaccgccct aactcggtgc agacgacggt ttccctgggc aacatcgcca tcgaccggcg
     1801 cagccccgac tacatgccga tggtggtgat gaacgatatc atcggcggcg gcgcgtcggc
     1861 gcgactgttt ctcaacctgc gcgaggaaaa aggctacacc tacggggttt acagcgactt
     1921 taccgcggtg cggtatcccg gaccctggcg tgccggcggc aacatgcgca cggaagtcac
     1981 tgagggcgcg atggccg
//
LOCUS       DATIRS010001251         3286 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_979607, whole genome shotgun sequence.
ACCESSION   DATIRS010001251 DATIRS010000000
VERSION     DATIRS010001251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3286)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3286)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3286
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_979607"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            401..1444
                     /locus_tag="VLM90_16150"
     CDS             401..1444
                     /locus_tag="VLM90_16150"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14559.1"
                     /translation="MVRLSLTTPARKLRRRLTLVLIILALLAQTALTHGAAAPVRVAI
                     AYPSPSPRVAPLWLAQDLDFFGKYGLRGQSVLVRNNQMLTAGFASGDIDVAYTGGTTV
                     LGGAASGTELKLLAGFVSRGRGFLTVRPDIRKPADLSGKRFGVQSIGGTLWMYAMLTL
                     EQLGLDPVRDKIQFIVVGDQTVMVRALESGVIDATVLTTRAYSLDLKKKGFNVMNEVF
                     PAMASTGIVARKSFLDKSPSTAENILKAMIEAEYYLLAPSGKSQTIKTIMSRLKLSDL
                     SLAEEGYGDIVKEFEPKPYPSLEGLKNMQRLLAMQNPKLADVNPATLIDNSFLRKLED
                     SGFLAQMQARYRE"
     gene            complement(1508..2821)
                     /locus_tag="VLM90_16155"
     CDS             complement(1508..2821)
                     /locus_tag="VLM90_16155"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ14560.1"
                     /translation="MDENDNQLALRPPFSLPFYYGWFIIGLSFLAYLAASAVRSAPSV
                     LIHPLEREFGWGRTAISAAASLNLLTYGLMAPVGGWLLDRYGARRVVIGCLAAIAVGV
                     TGTVFVSELWHFILLWGIVLGIATGVTPALSASVASRWFIARRGLALGILTNANATGQ
                     VIFLPILMALVVSHGWRTAMMLIVGTALLLLPAIWLWLRDYPAELGLEPYSDGTTTLD
                     QRNQARAAPRAFSLAAFGDAFKTPTFWLLSGSFFVCGMTSNGLVGTHMIPHAIERGIA
                     EVTAATAVGIMGVASFVGTTFAGWLCDRMDARKVLSAAYLFRGLSLFVLPYVTDSSGL
                     FVFAVLYGFDWFATGPSTVALIAKHFGQDRVGVLFGLVFVSHQIGSAIAALGAGWIYS
                     EFGEYYYAFMSGALMGLLAAGMAMLIRRDRDQAPALSVGAQAARA"
BASE COUNT          780 a         1020 c          905 g          581 t
ORIGIN      
        1 agtgcaacat gcggctggag ccaggtgctt cagccgcatt ttttgatttt cttcgcctta
       61 gtcaagaccc tcttacgaat ccaatccatt gcaacctcta agcgactgcc tcgctagcta
      121 ctagaccgta taaagacgat aaacggtaac gagtctcggc cactggactg ctaagcatcg
      181 aaggcaaaaa caccaccaag ctaaaacgct tcccgctacg aagcggtgta gacctaaatg
      241 ctgcacatga ctaatggtgg gcggcttgag ggtattcggt ctcgccacga agagcttcgc
      301 gcagcagagc gcccgcgcat ttcgcccttt ctttagatcg gcgggattga tatgcactgc
      361 gttaagattc ctcccgccaa gacccaaaag gagcgtctct atggtacgcc tttctctgac
      421 gacgccagcg cgcaagttgc gccgccgtct cacactggta ttgatcattc tcgcgctgct
      481 ggcgcagacg gcgctgactc acggcgccgc cgcgccggtg cgcgtcgcca tcgcctatcc
      541 cagtcccagc ccgcgcgtcg cgccgctctg gctggcgcaa gatttggatt tcttcggcaa
      601 gtacggcctg cgcgggcaga gtgtgctggt gcgcaacaat cagatgctca ccgccggctt
      661 tgcctccggc gatatcgacg tcgcctatac cggcggcacg acggtgctcg gtggcgccgc
      721 ctccggcacc gagctcaagc tgctcgccgg cttcgtcagc cgcggccgag gttttctcac
      781 cgtgcggccg gacattcgca agccggcgga cttatcgggc aagcgcttcg gcgtccagag
      841 catcggcggg actttatgga tgtacgccat gctcaccctg gagcagctgg ggttggaccc
      901 ggtgcgcgac aagattcaat ttatcgtcgt cggtgatcag accgtcatgg tccgggcgct
      961 ggaaagcggc gtgatcgacg ccacggtgtt gacgacccgc gcctacagtc tcgacctaaa
     1021 gaaaaagggc ttcaacgtga tgaacgaagt attcccggcc atggcttcaa ccggcatcgt
     1081 cgcgagaaaa tcttttctcg ataaaagccc ctccaccgcc gagaatatcc tgaaagcgat
     1141 gatcgaagcc gaatactatc tgctggcgcc cagcggcaag agccagacga taaaaaccat
     1201 catgagcagg ctcaagctct ccgatctatc ccttgccgaa gaaggctacg gcgatatcgt
     1261 caaggaattt gaacccaaac cctatccgtc ccttgaaggt ttaaaaaaca tgcaacggct
     1321 cctggccatg caaaacccca agctcgccga cgtcaacccg gcaaccctga tcgacaactc
     1381 atttctgcgc aagctcgagg acagcggctt tctcgcccag atgcaggcgc gctaccgcga
     1441 gtaagcggcg cagttaccat tggtaatttt gaattctgga atcggcaatt catcgcgaag
     1501 cgatgattta cgcgcgcgcc gcttgggcgc ccacagacag agccggagct tgatcccgat
     1561 cccggcgaat cagcatcgcc atcccggcag cgagcaaacc catcagcgcg ccactcatga
     1621 aagcgtagta gtattcgccg aactcgctat agatccagcc cgcgccgagg gcggcgatgg
     1681 cactgccgat ttggtgcgat acgaaaacca agccgaagag cacgccaacc cggtcctggc
     1741 caaaatgttt ggcgatcagc gccaccgtcg acggtccggt ggcgaaccag tcgaagccgt
     1801 acaaaaccgc gaagacgaat aagcctgacg agtccgtcac gtagggcaag acaaacagcg
     1861 acaagccacg gaacaaataa gccgccgaca atactttgcg cgcgtccatc cggtcgcaca
     1921 gccaaccggc gaacgtggtc ccgacaaaac tcgccacccc catgatgccc accgcagtcg
     1981 ccgccgtcac ttccgcgatg ccgcgctcga tcgcatgggg aatcatatgg gtgccgacta
     2041 aaccgttgga ggtcatgccg cagacgaaga aactgccgct caaaagccaa aacgtcggcg
     2101 ttttgaacgc atcgccgaag gcggcaaggg aaaatgcgcg aggcgcggcg cgcgcctgat
     2161 tgcgttggtc taatgtcgtc gtgccgtcgc tgtaaggttc gaggccaagc tccgcaggat
     2221 agtcacgcag ccacaaccag atcgccggca acagcagtaa cgccgtgccg acgatcaaca
     2281 tcatcgccgt gcgccaacca tgagagacga ctagcgccat gagaatcggc aagaaaatga
     2341 cctgcccggt ggcattggcg ttggtgagaa tacccaaggc tagaccgcgc cgggcgataa
     2401 accagcggct cgccacgctc gccgacaaag ccggtgtcac gccggtagcg atgccaagga
     2461 caattcccca gagaagaata aagtgccaca gctcgctaac aaacacggta cccgtgacgc
     2521 cgacggcgat agccgcgaga cagccgatca cgacgcgtcg agcaccgtaa cgatcgagca
     2581 gccaaccgcc caccggcgcc atcaaaccat aggtgagtaa attcaaactc gccgccgcag
     2641 agatcgccgt tcgtccccaa ccgaattccc gctccaaagg atgaatcaac accgaaggcg
     2701 ccgagcgcac cgccgacgcg gcgaggtaag cgagaaagct cagcccgata atgaaccagc
     2761 cgtagtaaaa tggcagtgag aacggcggcc gcagcgccag ctggttatcg ttctcatcca
     2821 ttgttttcgt ctatcacaag cgaccgcagc gcataagggt tgaaaaaaac tgctgtggaa
     2881 gcagagaagc cggatctcac cacgaagtgc ttcatgagat tacgctcgtc tacagatcat
     2941 gaaaataccg gaagccacct cccgaggttt cattccttag actcgtcatg ccggcgcagg
     3001 acggcatcca ggggcgggag ggggatggat accggcctgc gccggtatga cggaacagag
     3061 agtcgttatc gatgcgcaga tcatcgctgc acgtatattt tcgaaggagg cacgaaggtt
     3121 tcggaaaaat aacattccga acttcgtgct cttcgtgcct ccttcgaaaa tacacgggca
     3181 gcgatggtct gcgcatcgat aacgactctc tgttccgtca taccggcgca ggccggtatc
     3241 catccccctc cggcccctgg atgccggcct acgccggcat gacaat
//
LOCUS       DATIRS010001252         1694 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_192187, whole genome shotgun sequence.
ACCESSION   DATIRS010001252 DATIRS010000000
VERSION     DATIRS010001252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1694
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192187"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1584
                     /locus_tag="VLM90_16160"
     CDS             <1..1584
                     /locus_tag="VLM90_16160"
                     /inference="COORDINATES: protein motif:HMM:NF024938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HSQ14561.1"
                     /translation="KFVSVGNKADVSGNDLLQYWEQDGQTDVILLYLESFGNPRRFAR
                     IASRVTRHKPIIAVKAGRTGAGKRAASSHTAALAASDVAVDALFHQTGVIRAESLGEM
                     FDLAAALSAQPLPDGRRVALLTNAGGLGILCADTCEANGLLVQELCEATKNHLKEFLP
                     AAASVMNPIDMIASASAENFSTATEILLCDNQVDSLIVLTIHVGLADISAIARGIAGG
                     VAAARAQGGAGKPVLTCIMDGDKLSAASASNGERLPNYAFPENAARVLGKLANYADWR
                     KQPQGMIPEFDDMQPQAARALCQAIVKERGTGWLDAEEVRQVLKDFSLPVSPSAIGRS
                     ADAAAQAARDIGFPVALKLASRQIVHKTEFGGVQLNLQDEIAVRAAFATIHQRLADAN
                     RLDAFDGVLVQPMIGGGVELMVGITQDPSFGPLIAFGLGGIHVEILQDVCFRVTPITD
                     RDAKEMVRAIRGYRLLEGYRGHPPADISAIEDLLLRVARLVEEIPEITELDLNPVIAL
                     PPGQGCCIVDARIRVSSFE"
BASE COUNT          342 a          541 c          488 g          323 t
ORIGIN      
        1 aagtttgtta gcgtcggcaa caaagcggat gtctcgggca acgacctgct gcaatactgg
       61 gagcaagatg ggcaaaccga tgtcatcctt ctctatctag aatccttcgg caaccccaga
      121 cgctttgccc gcatcgctag ccgtgtcacc cggcacaagc cgataatcgc tgtcaaagcg
      181 gggcgaaccg gcgcgggcaa acgggccgcc agctcgcaca ccgcagcctt ggccgccagc
      241 gatgtcgcgg tcgacgcgct atttcatcag acgggcgtga tccgcgccga atctctgggt
      301 gaaatgttcg atctcgccgc ggcgttgagc gcgcaaccgc tgcccgatgg ccgccgcgtc
      361 gcgctgctca ccaacgccgg cggcttgggc atcctgtgcg ccgacacctg cgaagccaac
      421 ggtttgctag ttcaagagct gtgcgaagcg accaaaaatc atctcaagga atttttgccg
      481 gcggcggcga gcgtgatgaa tcccatcgac atgatcgcgt cggctagcgc cgaaaatttc
      541 tccacggcga cagaaatttt actttgcgat aatcaagtgg attcgctgat agttctgacc
      601 atccacgtcg gcctcgccga catctcagcg atcgcccgtg gcatagctgg cggtgttgct
      661 gccgcgcgcg cccagggcgg tgccgggaaa ccggtgctca cctgcatcat ggatggcgac
      721 aagctgagcg ctgccagcgc atcgaatggc gagcgtttgc ccaattacgc ctttccggaa
      781 aacgccgccc gtgtgctcgg caaactggca aactatgccg actggcgcaa acagccacag
      841 ggaatgattc ccgaattcga cgatatgcaa ccacaggccg cccgcgcgct ttgccaggcc
      901 attgtaaagg aacgcggtac gggttggctt gacgccgaag aggttcgcca agtcctcaaa
      961 gacttttctc tgccggtgtc gccgagcgca atcggccgta gcgctgacgc cgccgcgcaa
     1021 gccgcgcgcg acatcggctt tccagtggcg ctcaaactgg cgtcgcgcca gatcgtccac
     1081 aaaaccgagt tcggcggggt acaattgaat ctgcaagatg aaatagcggt ccgcgctgcc
     1141 tttgcgacca ttcaccaacg gctcgccgat gcgaatcgac tcgatgcttt cgacggcgtg
     1201 ctggtgcaac cgatgatcgg cggcggtgtc gagcttatgg ttggaattac ccaagaccca
     1261 tccttcggac ccttaatcgc cttcggcctg ggcggaattc atgtggagat tttgcaggac
     1321 gtttgcttcc gggtcacgcc gatcaccgat cgcgatgcca aggagatggt ccgcgccatt
     1381 cgcggctatc gattactcga aggctaccgc ggccacccgc cggcggatat ctccgccatt
     1441 gaagatctct tgctgcgcgt cgcccgcctc gttgaagaaa tacccgagat cacggaatta
     1501 gatttgaatc cggtcatcgc cctgccgccc ggccaaggct gttgcatcgt cgacgcgcgt
     1561 atccgcgttt cgtcattcga gtagaaccgc cccggcggtc gccctacttc acgatcagca
     1621 ccggacaatc ggcataacgc agcgtccgct ccgccacact gcccaagaga aaccgccgca
     1681 agccggtccg gcca
//
LOCUS       DATIRS010001253         1778 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_192287, whole genome shotgun sequence.
ACCESSION   DATIRS010001253 DATIRS010000000
VERSION     DATIRS010001253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1778)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1778)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1778
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192287"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1035)
                     /gene="tcuB"
                     /locus_tag="VLM90_16165"
     CDS             complement(<1..1035)
                     /gene="tcuB"
                     /locus_tag="VLM90_16165"
                     /inference="COORDINATES: protein motif:HMM:TIGR02484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tricarballylate utilization 4Fe-4S protein TcuB"
                     /protein_id="HSQ14562.1"
                     /translation="MAGLDLLNEGARQMTICNACRYCEGYCAVFPAMEQRRIFTKADL
                     TYLANLCFDCRDCYYACQYAPPHEFAVNVPQLMSELRADTYREFTWPALLAGVFKHNI
                     LAASVITVASMTIILGLVLAFQGAPVLFAVHLGEGAFYRVVPFIAMTVPPSLIALYGL
                     AVFTIGAIRFWRETQGNVVELIDFAALWRATKDAFGLAYLKGGGAGCNYPGESFSHSR
                     LWLHHAVFFGFLLDLAATTIAAFYDHFLSWQAPYPYFSAPVVLGTVGGIMLVIGTIGL
                     LYLKWRSDRGPAHASMLSMDVAFLLLLFLTSFTGLLLLGFRETTAMGSLLVIHLGVVA
                     GLFITMPYGKF"
     gene            complement(1022..>1778)
                     /gene="tcuA"
                     /locus_tag="VLM90_16170"
     CDS             complement(1022..>1778)
                     /gene="tcuA"
                     /locus_tag="VLM90_16170"
                     /inference="COORDINATES: protein motif:HMM:NF006130.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent tricarballylate dehydrogenase
                     TcuA"
                     /protein_id="HSQ14563.1"
                     /translation="GTKNNQGVLLKALLKHGAKPEGDPRGCHAVALDARAPKFDGGIV
                     TRLDSVPFGLVVNKEVKRFYDEGEDFWPKRYAIWGKLIAEQPGQIAYSIVDANALPRF
                     MPSVFPPLQAGSIAELAIAMEIAPQALVAVVAEFNRAVRVGRFDPGSLDDCHTEGLTP
                     PKSHWAKAIDTPPYYGYPLRPGITFTYLGVTVDEQARVIMQNDQPAKNIFAAGEVMAG
                     NILGRGYLAGFGLTIGSVFGRIAGREAARHGRA"
BASE COUNT          408 a          539 c          522 g          309 t
ORIGIN      
        1 gaatttgccg tacggcatcg tgatgaacag accggcgaca actcccaggt gaatgaccag
       61 caaactgccc atcgccgtcg tctcgcgaaa gccgagcagc agcagtcccg tgaagctggt
      121 cagaaataac aagagcagaa acgccacgtc catgctgagc atactcgcat gcgcgggacc
      181 gcggtcgctt cgccatttca aataaagcag accgatcgtg ccgataacca acatgatccc
      241 gccaaccgtg ccgagaacca ccggcgcgct gaaataagga tagggcgcct gccaggagag
      301 aaaatgatcg tagaacgcgg cgatcgtggt cgccgccaag tcgagcagaa agccgaagaa
      361 aaccgcatgg tgcaaccaca acctcgaatg agagaagctc tcccccggat agttgcagcc
      421 ggcgccgccg cctttcaggt aggccaagcc gaaggcgtct ttggtagcac gccagagcgc
      481 ggcaaaatct atcagctcga ctacgttccc ttgggtctcg cgccagaatc gaatcgcgcc
      541 aatcgtgaaa accgccaaac cgtaaagcgc gatcagtgac ggcggcacgg tcatggcgat
      601 gaatggaacc actcgataaa acgcgccttc gccaagatga acggcgaaca atacgggtgc
      661 cccttggaat gccagcacga ggccgaggat gatcgtcatg gacgccaccg tgatgacgct
      721 ggccgctagg atgttgtgtt tgaatacgcc ggctaacagc gccggccaag taaactcgcg
      781 gtaagtatcc gcgcgcagtt cggacatgag ctgggggaca ttcacggcga actcgtgcgg
      841 cggcgcgtac tgacaggcgt aataacagtc acggcaatcg aagcaaagat tagccagata
      901 agtgagatcg gccttggtaa aaatccgccg ctgctccatt gccgggaaca ccgcgcagta
      961 gccttcgcag tagcggcagg cattgcagat cgtcatctgc cgcgcgcctt cgttgagcag
     1021 atcaagcccg gccatggcgc gccgcctctc tgccggcgat gcggccgaat acggaaccga
     1081 tggtcaagcc gaagccggcc aggtaacctc ggccgagaat gttccccgcc atcacctctc
     1141 ccgcggcgaa aatgtttttc gccggctggt cgttttgcat gatcacccgc gcctgctcat
     1201 cgacggtaac gccgagatag gtaaaagtaa tgcccggccg cagcgggtag ccatagtaag
     1261 gcggcgtgtc gattgctttc gcccagtggc tcttcggcgg cgtgagccct tcggtatgac
     1321 aatcgtccaa gctgccagga tcgaatctcc caacccgtac cgcgcggttg aattccgcaa
     1381 cgacggcaac caacgcctgc ggggcaattt ccatcgcgat cgccagctca gcgatcgagc
     1441 ccgcttgcag cgggggaaat accgacggca tgaagcgagg cagcgcattg gcgtcgacga
     1501 tggaataggc aatctgtccc ggttgctcgg cgatgagttt gccccagatg gcgtaccgct
     1561 tgggccagaa atcttcgccc tcatcgtaaa aacgtttcac ctctttattg accaccaggc
     1621 cgaagggcac gctgtcgaga cgggtgacga tgccgccgtc gaacttcggc gcgcgcgcat
     1681 cgagggccac ggcatggcag ccgcgcggat ctccctccgg tttggcgcca tgtttgagca
     1741 acgctttgag caacactccc tgattgttct tggtgccg
//
LOCUS       DATIRS010001254         1725 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_685371, whole genome shotgun sequence.
ACCESSION   DATIRS010001254 DATIRS010000000
VERSION     DATIRS010001254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1725
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_685371"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..623)
                     /locus_tag="VLM90_16175"
     CDS             complement(<1..623)
                     /locus_tag="VLM90_16175"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: protein motif:HMM:NF003678.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004609 - phosphatidylserine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase family protein"
                     /protein_id="HSQ14564.1"
                     /translation="MRIAKEGWPLILAAAALALLALLFGWLAAAIALAILTLGVAAFF
                     RDPERAVPTGDGLVVSPADGRVVTIAPVQGDGLFGDAVMRISIFLSPLDVHINRAPVA
                     GRVNDVRYQTGKFLAAFKEDSSRVNEQNALRLVDERERNWGVVQIAGAVARRIVCHSK
                     AGDVLGRGERFGLIMFGSRTDIYLPQGCGIEVVEGQRVRGGETIIGR"
     gene            complement(667..>1725)
                     /gene="ilvC"
                     /locus_tag="VLM90_16180"
     CDS             complement(667..>1725)
                     /gene="ilvC"
                     /locus_tag="VLM90_16180"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: protein motif:HMM:NF004017.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HSQ14565.1"
                     /translation="RHSRKPKVQRRNHSMQVYYDRDADLNVLKGKKVAVLGYGSQGHA
                     HANNLRDSGVDVVVGLRRGSSSWAKAENAGLKVFETAEAVALADIVMVLLPDELQGDA
                     YEKEIRPGLKSGNYLAFGHGFNIHFKRIVAPAGVNVFMVAPKGPGHLVRSEYEKGRGV
                     PCLLAVHQDPSGDTTKIGLAYASAIGGARAAVIETTFKDETETDLFGEQSVLCGGLCA
                     LIQAGYETLVDAGYPPEMAYFECVHEVKLIVDLIYEGGMTNMRYSISNTAEYGDLTRG
                     KRVIGPEVKEAMQKILKDIQSGKFADEWINEFKAGSPHFTELRKEQANHPLEKVGAGL
                     RSMMPWLGQNRLVDRSKN"
BASE COUNT          356 a          565 c          450 g          354 t
ORIGIN      
        1 aacctcccga tgatggtctc cccgcctcta accctttgcc cctccaccac ttcgatacca
       61 cacccttgag gcaaataaat atcggtacgc gagccgaaca taatcaaacc gaagcgttcg
      121 ccgcggccca acacatcacc ggctttcgaa tggcaaacaa tgcgcctggc gaccgcaccg
      181 gcgatttgca ccacgcccca attgcgctcc cgttcgtcga ccagccgcag cgcattttgc
      241 tcgttgacgc gcgaggagtc ttccttgaag gccgcgagaa atttgccggt ctgatagcgc
      301 acgtcgttaa cccgcccggc gaccggcgcg cgattgatat gcacgtcgag aggcgacagg
      361 aaaatactta ttcgcatcac cgcgtcaccg aacaggccat cgccttgcac cggagcgatg
      421 gtgacaaccc ggccgtccgc cggcgaaacc acgaggccgt caccggtggg gaccgcgcgc
      481 tccgggtcgc gaaaaaatgc cgcaacccct agcgttagga tcgccaatgc gatagcagcc
      541 gccagccagc cgaacaacaa cgctagcaac gccagcgctg cggccgccag aatcaacggc
      601 caaccttcct ttgcgatacg catcgtgtgc cgcctagagc gagttatcac ccatcgggcc
      661 actagcctaa ttcttacttc ggtcgaccaa acggttctgg cccagccaag gcatcatcga
      721 ccgcaacccg gcgccgactt tttccagcgg gtgattggcc tgttcttttc tgagctcggt
      781 gaaatgcggc gatcccgcct taaactcgtt gatccactcg tcggcgaatt ttccggattg
      841 gatatccttg aggatcttct gcatcgcttc cttaacttcc ggaccgataa cacgcttgcc
      901 acgggtcaag tcgccatatt ccgcggtatt gctgatcgag tagcgcatgt tcgtcatgcc
      961 accctcatag atcagatcga caatcagctt cacttcgtgg acgcattcga aataggccat
     1021 ctcgggcggg taaccggcat cgacgagggt ctcgtagccg gcttgaataa gcgcgcacaa
     1081 tccgccgcac aataccgact gttcgccgaa gagatcggtt tcggtttcgt ccttgaaggt
     1141 ggtctcgatc acggcggcgc gagcgccgcc gatggcgctg gcgtaggcca aaccgatctt
     1201 cgtcgtgtcg ccgctagggt cttgatgcac cgccaacagg caaggcacgc cgcgcccttt
     1261 ctcgtactcg ctgcgaacca agtggcccgg tcccttgggg gcaaccatga atacattgac
     1321 tcccgccggg gcgacgattc tcttgaaatg aatattgaag ccatggccga acgccaagta
     1381 gttgccgctc ttcaatcccg gccggatttc cttttcgtaa gcatcgccct gcaactcatc
     1441 gggcagcagg accatgacga tatccgccag cgcgaccgcc tcggcggttt cgaagacttt
     1501 gaggccggcg ttctccgctt tcgcccatga gctgctgcca cggcgcaggc cgacgacgac
     1561 atcgacgccc gagtcgcgca aattattggc atgcgcatgc ccttggctgc cgtaaccgag
     1621 cacggcgact ttcttgccct tcaacacatt gagatccgca tcgcggtcgt aataaacttg
     1681 catggaatga tttctcctct gcactttagg ctttctacta tgccg
//
LOCUS       DATIRS010001255         2260 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_882199, whole genome shotgun sequence.
ACCESSION   DATIRS010001255 DATIRS010000000
VERSION     DATIRS010001255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2260)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2260)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2260
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_882199"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..417)
                     /locus_tag="VLM90_16185"
     CDS             complement(<1..417)
                     /locus_tag="VLM90_16185"
                     /inference="COORDINATES: protein motif:HMM:NF014386.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HSQ14566.1"
                     /translation="MTNLLAWDFAFAVGSILAAFSQGVILGGLIQGITVVNGEFAGGP
                     FDWATPFALMCGVGLVVGYALLGATWLIARVEGPLADWARRQAGALLAVVLLFIALVS
                     LWTPYEFERIAERWFSTPNIYFLWPVPLLTAALGFIA"
     gene            complement(574..1998)
                     /locus_tag="VLM90_16190"
     CDS             complement(574..1998)
                     /locus_tag="VLM90_16190"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ14567.1"
                     /translation="MHYRDLRGWLDGVDSFGELRVVEGADWNQEIGAVAEVAAQSNPP
                     PAVLFDKIKEYPAGRRVLTGVHNPTLKRQCLTNHLPLDYTRDQFIDAWKKRLDHPTLL
                     PPRVVDSGPVLENVFEGNDIDLLSLPVPWWHEGDGGRYIGSMDTTISRDPDEGWINVG
                     CYRVMVHDKDTLALYISPGHHGHIHRQKYFDKGQPFPVAISFGPDPLLWFFGQMEIPA
                     GESEYDYAGGVRGEPYEVILGKHTGLPIPAYSEIVIEGEVLPGTSIPEGPFGEFTGYY
                     AGGLRSEPMLKVKRLMYRNDPIMTGAPPFKPAAGAENNLIRAAYIWNYLDKAGVPDVR
                     SVAYHQTRLLVALSIKQRYPGHARQAALIASQCRAAALLTRYVMVVDDDIDIWDTNEL
                     LWALCTRTDPAKDIDILRRCWSNPIDPIIPPSERGFQSRGIIDACRPYEWINEFPKVS
                     GASKELKEKVTKKFAASLAAKKEI"
BASE COUNT          447 a          694 c          676 g          443 t
ORIGIN      
        1 ggcgatgaac ccgagcgccg ccgtgagaag cggcacaggc cacaggaaat agatgttggg
       61 cgtcgagaac cagcgctcgg cgatccgctc gaactcgtag ggtgtccaca ggctgacgag
      121 cgcgatgaag agaagcacga ccgccaggag cgcgccggcc tgccgccgag cccagtcggc
      181 aagcggtccc tcgacgcgcg caatcagcca ggtcgcgccg aggagcgcat agccgacgac
      241 gaggccgacg ccgcacatca gcgcgaaagg cgtcgcccag tcgaacggcc cgccggcaaa
      301 ttcgccgttg acgaccgtga tgccctggat caggccgccg agaatgacgc cctgcgagaa
      361 agcggcgagg attgagccga cggcgaaggc gaagtcccac gccagtaaat ttgtcatcgg
      421 aaagggcaac cacggggggt tgcccccacg cccggaattt cccttggaat atttttgcgc
      481 cctttgcgct ctttgcggtt aataaatctt cgtcttcgat cctagtgggc tattaatcgc
      541 gcccctattt tgtgcccctt gtgatctttg tggttaaatc tctttcttcg ccgccaggct
      601 cgcggcgaat ttcttcgtga ctttttcttt cagctccttg ctcgcccccg agactttggg
      661 aaactcgttg atccattcat agggccggca ggcgtcgatg atgccgcgcg attggaagcc
      721 gcgctcgctc ggcgggatga tcggatcgat gggattgctc cagcagcggc gcaggatgtc
      781 gatgtctttc gccgggtcgg tgcgcgtgca cagcgcccac aacagttcgt tggtgtccca
      841 gatatcgata tcgtcgtcga ccaccatgac gtagcgtgtc agcagcgccg cggcgcggca
      901 ttgcgacgcg atcagcgccg cttgacgggc atggccggga taacgctgct tgatcgacag
      961 cgcaaccagc aagcgggttt gatgataggc gacgctgcgc acgtccggca cgccggcctt
     1021 gtcgagatag ttccaaatat aggcggcgcg gatcaaatta ttttccgctc ccgcggccgg
     1081 cttaaacggc ggcgcgccgg tcatgatcgg atcgttgcgg tacatcagcc gctttacttt
     1141 gagcatcggc tccgagcgca gaccgccggc gtagtaaccg gtgaactcgc cgaacggtcc
     1201 ttcggggata ctcgtgccgg gcaacacttc gccctcgatg acgatttccg aataggccgg
     1261 gatcggcagg ccggtgtgtt tgcccaggat cacttcatag ggctcgccgc gcacgccgcc
     1321 ggcatagtcg tattcagact cgcccgccgg gatttccatc tggccgaaaa accatagcag
     1381 cggatcggga ccgaaactga tcgccacggg aaacggctgg cctttatcga aatatttctg
     1441 ccggtgaata tggccgtgat ggcccggcga gatgtagagc gccagcgtat ctttatcgtg
     1501 caccatgacg cggtaacagc cgacgttgat ccagccttcg tcggggtcgc ggctgatggt
     1561 cgtgtccatg gagccgatgt agcggccgcc gtcgccctca tgccaccacg gcaccggcaa
     1621 ggacaacagg tcaatatcat tgccttcaaa aacattttcc agcaccggcc cgctatcgac
     1681 cacccgcggc ggcagcaagg ttggatgatc gagacgcttc ttccaggcgt cgatgaactg
     1741 atcgcgtgtg taatccagcg gcaaatggtt ggtcaagcat tggcgcttga gcgtcggatt
     1801 gtgcacgccg gtgagcacgc gccgccccgc cgggtattct ttgatcttgt cgaacagcac
     1861 cgccggcggc ggattggact gcgccgcgac ttcagcgacc gcgccgatct cctggttcca
     1921 gtcggcgcct tccaccaccc gcaactcgcc aaacgaatcg acaccgtcca accatccgcg
     1981 cagatcacga taatgcattc cgcctccttc gaaccgtggc gatcttagaa cggacaatgg
     2041 ctcggcacaa ccgctctatg tctcaatcga gcatggtcat ggtgaatatc actcgccact
     2101 aggcgaagtg aagatccgcc atgccggcgc ggaccggcat ccaatctttg tctgatacgt
     2161 cttccgcagc gctgaaagaa atctcgattc cggcttccgc cgtaatgacg gatggggaaa
     2221 cgacttcgag tcggaagatt aacaaccccg ctgtttggag
//
LOCUS       DATIRS010001256         1716 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_882324, whole genome shotgun sequence.
ACCESSION   DATIRS010001256 DATIRS010000000
VERSION     DATIRS010001256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1716)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1716)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1716
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_882324"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..642
                     /locus_tag="VLM90_16195"
     CDS             <1..642
                     /locus_tag="VLM90_16195"
                     /inference="COORDINATES: protein motif:HMM:NF015214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase C-terminal
                     domain-containing protein"
                     /protein_id="HSQ14568.1"
                     /translation="WERMFVYKDPQLLSGIMYIHTWGQYSTMLRLVTKLEAFLGVAQI
                     LTQYAKRNTSAPSQIMLSSLIQDIEILRSCIQVGESKGYRAGGGTWAPLLSAAYRVHS
                     IEASDRAERTMEGLLTSTLMLSGGASDLNSADLGPFVERYFRGGAPDTKEHLRLMAVA
                     ADMVMTPFGKRSQLYERLQSGEVDRMRQRLYGQYQDPAPAERMMQFVKSMSKD"
     gene            671..1141
                     /locus_tag="VLM90_16200"
     CDS             671..1141
                     /locus_tag="VLM90_16200"
                     /inference="COORDINATES: protein motif:HMM:NF013052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SET domain-containing protein-lysine
                     N-methyltransferase"
                     /protein_id="HSQ14569.1"
                     /translation="MKKTKGKKIHRRIVVRNSPIHGRGVFALRPIAKGTRIIEYKGKL
                     ITDKEADRRFGRLQENSSHTMLFSVDDELVIDATRGGNLARWINHSCAPNCEIEEENH
                     RVFIEARRDIRPGEELAYDYNLQIGEKHTQKAKRDHACLCGAKRCRGTMLGEDE"
     gene            1308..>1716
                     /locus_tag="VLM90_16205"
     CDS             1308..>1716
                     /locus_tag="VLM90_16205"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14570.1"
                     /translation="MKITVIDDNQDAFRRMSCFAKLAGHEVEIYNDTLKDPAQLAERL
                     RDAECVVLTQQRSWIRRPLLEALPSLRLISQTGRVTAHIDLKACTERGVMVCAGGQGR
                     PHSTAELAWALILAALRHVPEEVFGLRQGRWQST"
BASE COUNT          375 a          483 c          540 g          318 t
ORIGIN      
        1 tgggagcgca tgttcgtcta caaggatccg cagctgcttt ctggaatcat gtacattcac
       61 acctgggggc aatactcgac gatgttgcgt ctggtgacca agttggaggc ttttctcggc
      121 gtggcgcaga tcttgacgca gtatgccaag cgcaacacca gcgcgccgtc gcagatcatg
      181 ctgtcgagct tgatacagga tatcgagatc ctgcgctcgt gcattcaagt gggcgagtcg
      241 aaaggctacc gcgccggcgg cggcacctgg gcgccgctgt tgagcgcggc ctatcgggtg
      301 catagcatcg aagcatcgga ccgcgccgag cggaccatgg agggattgct aaccagcacc
      361 ttgatgttga gcggcggcgc gtcggatttg aacagcgccg acctcgggcc gtttgtcgag
      421 cgctacttcc gcggcggcgc gccggatact aaagagcacc tgcgcctgat ggcggtggcg
      481 gcggatatgg tgatgacacc gttcggtaaa cgcagccaat tgtacgagcg cttgcagagc
      541 ggcgaagtcg accgcatgcg ccaacggctc tacggtcagt atcaggaccc ggcgccggcc
      601 gagcggatga tgcaattcgt caaatcaatg agcaaggatt aaggttcgtg tatactcaca
      661 ttctaaaaat atgaaaaaga ccaaagggaa aaagattcac cggcgcatcg tcgtgcgcaa
      721 ttcgccgatc catggacgcg gggtattcgc gctgcggccg attgccaagg gcacgcggat
      781 catcgagtac aaaggcaagc tgatcaccga caaagaggcg gaccggcgtt tcggccggct
      841 ccaagaaaac tcgtcgcaca cgatgttgtt ctccgtcgac gatgagttgg tgatcgacgc
      901 cacccgcggg ggaaatttgg cgcgctggat caatcactcc tgcgcgccta actgcgagat
      961 cgaggaagaa aatcatcggg tgtttatcga agcgcgccgc gatattcgtc ccggcgaaga
     1021 gctcgcctac gattacaacc tgcagatcgg cgagaaacac acccagaaag ccaagcgcga
     1081 ccatgcctgc ctgtgcggcg ccaagcgctg ccgcggcaca atgctcggcg aggacgagtg
     1141 agttaggata tttggccgca aagaacacaa agggcgcaaa gtagggcgcg attcatcgcg
     1201 ccatcggacc gacgtctggg attactcaac cgcaaagagt gcaaggggcg cgaaaataga
     1261 atcgggaccc cgtaggggcg ggtttgaaac ccgccctctt agcttcaatg aagatcaccg
     1321 ttatcgacga caaccaggat gccttccgtc ggatgtcttg cttcgccaag cttgccggcc
     1381 atgaggtcga gatttacaac gatacgctga aggatccagc gcagctagcc gaacggctgc
     1441 gcgatgccga gtgcgtcgtg ttgacgcagc agcgctcctg gattcgccgt ccgttgcttg
     1501 aggcgttgcc tagtttgcgg ctgatcagcc agacggggcg cgtgaccgcg catatcgatc
     1561 tcaaagcgtg caccgagcgc ggcgtcatgg tgtgcgccgg cggccagggc cggccccatt
     1621 ccaccgcgga gcttgcttgg gctttaatac tcgcggcgct gcgacatgtt ccagaagaag
     1681 tgttcgggct gcgccaagga cgctggcagt cgacct
//
LOCUS       DATIRS010001257         1756 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1079541, whole genome shotgun sequence.
ACCESSION   DATIRS010001257 DATIRS010000000
VERSION     DATIRS010001257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1756
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1079541"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(119..>1756)
                     /locus_tag="VLM90_16210"
     CDS             complement(119..>1756)
                     /locus_tag="VLM90_16210"
                     /inference="COORDINATES: protein motif:HMM:TIGR01511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HSQ14571.1"
                     /translation="VITVLVLLGQVLELRARQRTSGAIKALLDLAPKTARRVTPAGDE
                     EVSLDAVQPGDQLRVRPGEKIPVDGEVVEGRTAVDESMLTGEPLPVEKTVGAKVSGGT
                     VNTTGGMIMRAERVGSETLLAQIVNLVAQAQRSRAPIQALADKVAAWFVPTVLGVSAL
                     TFAAWMIWGPEPRLAYAITNAVAVLIIACPCALGLATPMSVMVGIGRGAQIGVLIRNA
                     EAIEKLAQLNTLAVDKTGTLTEGKPKLVQIVPINGFSDTDLLRLAASLEQSSEHPLAH
                     AVVMAARERQLSLENAVDFQSTTAGGVTGTIGGRMVAVGKADFLREIGVRDTSALESL
                     AAPHQAEGATAILVAIAGRPAGVLTIADPVKATTPEALTELRKLGVQVLMLTGDNPRT
                     AEAVARKLGIQDFKAGVTPHDKHEKVKALKAAGRIVGMAGDGINDAPALAAADVGIAM
                     GTGTDIAMESAGVTLVRGDLMGIVRAIRLGRAMMRNIRQNLVFAFGYNALGIPIAAGV
                     LYPFFGALLSPIIAGAAMSLSSVSVIGNALRLRKAKL"
BASE COUNT          330 a          552 c          509 g          365 t
ORIGIN      
        1 tggatcagaa aggatgtttc gttatgaggg cgattagttc ttcatccaag aaatccttct
       61 tcccgatccc caactgtttg gccgctggcg tttttccagg cggaggttaa tcggtggttc
      121 atagcttagc ttttcgcagc cggagggcat tgccgatgac tgagacagaa ctcaagctca
      181 tggctgcgcc ggcgatgatg ggactcagca gcgcgccgaa gaatggatag agcacgcccg
      241 cggcaattgg aatcccgagc gcattgtagc cgaaggcaaa gactaggttc tggcggatgt
      301 ttcgcatcat cgcccggccc aaacgtatcg ctcgaacgat gcccattaga tctcccctca
      361 ccagcgtgac gccggcgctt tccatggcaa tgtccgtccc ggtgcccatg gcgataccaa
      421 catccgctgc ggcgagtgcg ggggcgtcat tgatgccgtc gcccgccatg ccgacaatcc
      481 ggcccgccgc tttgagggct tttaccttct cgtgtttgtc gtgcggcgtg acgccagcct
      541 taaagtcttg aatgccgagc ttgcgggcaa cggcttcggc cgtgcgcgga ttatcgccgg
      601 tgagcatgag cacctgcacg ccgagcttac gcaattccgt cagcgcttcc ggcgtcgtgg
      661 ctttcacggg atcggcgatt gtcaggactc ccgccgggcg gcccgcgata gcgaccagaa
      721 tcgcggtggc tccttcggct tgatgagggg cggccaatga ttcaagcgca ctggtgtctc
      781 tcactccgat ttcgcgcagg aagtctgctt ttccaaccgc caccatccgt ccgccgatgg
      841 tgccagtcac gccgccggcg gtggtggatt gaaaatcaac agcattttca agcgaaagct
      901 gcctttcgcg agcggccatc acgactgcgt gagccagggg atgttcacta ctttgctcca
      961 atgaagcagc gagtcgaaga agatccgtat cggagaatcc atttatcggc acaatttgca
     1021 cgagcttcgg tttgccttcc gtgagtgtgc ccgttttgtc caccgccagc gtgtttagct
     1081 gagccagctt ctcaatagct tcggcgttgc gaatgagcac tccgatttgc gcgccgcggc
     1141 caatgccgac catcacgctc atcggcgtag ccaacccgag cgcgcaggga cacgcaatga
     1201 tgagaaccgc cacggcgttg gtaatcgcgt aggcgaggcg aggttctggt ccccaaatca
     1261 tccacgcggc aaatgtgagc gcagaaactc cgagcacggt gggcacaaac cacgccgcga
     1321 ccttgtccgc cagagcttga atcggcgctc gactccgctg cgcctgcgcc accaggttca
     1381 cgatctgcgc cagcagcgtt tcgctgccga cgcgttcggc ccgcatgatc atcccgcctg
     1441 tagtgttcac cgtccccccg gaaactttgg ccccaaccgt tttctcaact ggcagcggtt
     1501 cgccggtgag catggattca tccaccgcag tccgaccttc cacaacttcg ccatccacgg
     1561 gaatcttctc gccggggcgc acgcggagtt ggtcgcccgg ttgcacagca tccaacgaaa
     1621 cctcctcgtc acctgcaggc gtaacccgcc gcgcggtttt tggtgccaga tcgagcaagg
     1681 ctttaatcgc gccgctggtg cgttggcggg cgcgaagttc gagcacctgc ccgagcaaca
     1741 ccagcacggt gatgac
//
LOCUS       DATIRS010001258         1739 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_489268, whole genome shotgun sequence.
ACCESSION   DATIRS010001258 DATIRS010000000
VERSION     DATIRS010001258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_489268"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(78..818)
                     /gene="truA"
                     /locus_tag="VLM90_16215"
     CDS             complement(78..818)
                     /gene="truA"
                     /locus_tag="VLM90_16215"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HSQ14572.1"
                     /translation="MNVKLTVEYDGTNYHGWQVQANYPSIQAVLEKAVSTFLGVPTHI
                     NGSGRTDAGVHALGQVANFFTDKVYLPYRILRGLNALTPRDITVKDVEIVDDCFDARR
                     DGRSRLYEYLILNRSTPSPFHHNRAWHIHEPLDVEAMAKAVECLVGEHDFSSFRAANC
                     DASHPIRTVYQTGLEYRGELLVYGIEGTAFLRHMVRNIVGTLADVGRGIRTAESFVEL
                     LDARDRTQAGYTAPPVGLYLVQVKYDPT"
     gene            complement(903..>1739)
                     /locus_tag="VLM90_16220"
     CDS             complement(903..>1739)
                     /locus_tag="VLM90_16220"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: protein motif:HMM:NF011456.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HSQ14573.1"
                     /translation="DSFKDLDICLFSAGGSVSAEFARLAVAAGAVVVDNTSVFRLEPD
                     IPLVVPEVNSKAIANYKTRGIIANPNCSTIQMVVALKPIHDTARIKRVVVSTYQSVSG
                     AGRKAMEELSQQVAALFNGKEIEKVKFPHQIAFNCIPHIDVFMADGYTKEEWKMIEET
                     RKILGEPNLPVTATTVRVPVFCSHSESVNVETYVKLSANEARRILREAPGIIVADEPE
                     NNLYPMAIDAAGKDATYVGRIREDKSVANGLNLWVVSDNLRKGAALNAVQIAEILIRD
                     YL"
BASE COUNT          378 a          498 c          497 g          366 t
ORIGIN      
        1 caccgtttgg gtataagtaa atcgccctgg tgtgtcaatg caaaaccacg cgcgccgaca
       61 agcgaataag gcaccgatta cgtcgggtcg tatttgacct gcaccaaata caaccccacc
      121 ggcggcgcgg tgtaaccagc ctgggtgcgg tcgcgcgcat cgagcagctc gacgaacgat
      181 tcggcggtgc ggatgccacg gcccacgtcg gcaagcgtgc ctacgatgtt gcgcaccata
      241 tggcgcagaa aagccgtgcc ttcgatgccg tacaccagaa gctcgccacg gtattcgaga
      301 ccggtctggt aaacggtgcg aatcggatgc gacgcatcgc aattggcggc gcgaaacgac
      361 gagaaatcat gttcgccgac caagcattcg acagccttgg ccatcgcttc gacatccaac
      421 ggctcatgga tatgccaggc gcgattgtgg tgaaacggcg agggtgttga gcggttgaga
      481 attagatatt cgtaaagccg gctccggcca tcgcgccggg cgtcgaaaca atcatcgacg
      541 atttcgacat ccttcacagt gatgtctctc ggcgttagcg cgttgagacc gcgtagtatc
      601 cggtatggca ggtatacttt atcggtgaaa aaattggcca cctggccaag cgcgtggacg
      661 ccggcatcgg tgcggcccga gccgttgata tgggtgggca caccgagaaa ggtcgaaacc
      721 gctttctcta aaaccgcttg aatggacggg taattcgcct ggacctgcca accatgatag
      781 ttggtgccgt catattcgac ggtgagtttg acgttcacgg cagagtggtt ccgggtttcg
      841 cgttttgagt ttcgggttcg acaacacaat caccccgcga ctcatccagc gccgatgaag
      901 gtttataaat aatcgcggat taaaatctcg gcgatctgca cagcgttgag cgccgcgcct
      961 ttgcgcagat tatccgacac cacccaaaga ttgagaccgt tggcgaccga cttatcttcg
     1021 cgaatacggc cgacataggt agcgtctttg ccggcggcgt cgatggccat cggataaaga
     1081 ttgttctccg gctcatcggc gacgatgatg ccgggcgctt cccgtagaat ccgccgggcc
     1141 tcgttggccg acagcttgac gtaggtttcg acattcaccg attccgagtg gctgcaaaac
     1201 accggcaccc gcaccgtggt cgcggtgacc ggcaagttcg gctcgccgag gatcttgcgc
     1261 gtctcctcga tcatcttcca ctcttccttg gtgtagccgt cagccatgaa gacatcgata
     1321 tggggaatgc aattgaaggc gatctgatgc ggaaacttga ccttttcgat ttccttgccg
     1381 ttgaacagcg ccgctacctg ctggctcaat tcctccatcg ccttgcgccc cgcgccggaa
     1441 accgactgat aggtggacac caccacgcgt ttgatccgcg ctgtgtcatg aatcggcttg
     1501 agcgcgacga ccatttgaat cgtcgaacaa ttgggattgg cgatgatgcc gcgggttttg
     1561 tagttggcaa tcgctttgga attgacctcc ggaaccacca aaggaatatc cggctccagg
     1621 cgaaacaccg aagtgttgtc gactaccacc gcgccggccg ccaccgctag ccgcgcgaac
     1681 tccgcgctta cgctgccacc ggcagagaac aagcagatgt cgaggtcttt aaacgaatc
//
LOCUS       DATIRS010001259         1560 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1374233, whole genome shotgun sequence.
ACCESSION   DATIRS010001259 DATIRS010000000
VERSION     DATIRS010001259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1560
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1374233"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..216
                     /locus_tag="VLM90_16225"
     CDS             <1..216
                     /locus_tag="VLM90_16225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14574.1"
                     /translation="TYRLDKETATARYSSLVKGFNDDGNLPEDGLRRLIEDTKSVTKV
                     EREVVLSDVADLSILREVQRELGIKVK"
     gene            complement(244..1248)
                     /locus_tag="VLM90_16230"
     CDS             complement(244..1248)
                     /locus_tag="VLM90_16230"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14575.1"
                     /translation="MKIRRIRRIGPIGLILLASALASANADAQVTRLKTAYSALTANM
                     AAYWLAKEAKIFEKHGLSVDVVLIESGVTTVQALTAGETQIAMGGGTVAVSSNLAGSD
                     IVSISSIESRMPYALLAQKEIKTIEQLKGKRLAVSRFGSASDLAARLILQRYGLAPDK
                     DVTILQTGGTSTRLSALSKRSVDCTVLTPEFFNIGKKAGFTILVDPTQYDIPFPQLEV
                     ITSRAYLKAQPEVITRYMRAIVEGIYMVKQNPEPSIRALSKYLKIDDREALEEVYKLY
                     KELYPQIPHPSPAAIQTQLTWMAEKDPRAKAAKPEQFIDGTIMREIEKSGFVAKLYQK
                     "
     gene            complement(1245..>1560)
                     /locus_tag="VLM90_16235"
     CDS             complement(1245..>1560)
                     /locus_tag="VLM90_16235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HSQ14576.1"
                     /translation="YESSSLPGAWETLSAARLRSPAHQVRSTTDEFVKQLSRLTIPLL
                     LMSCEHDPLNQSDWDVNFQKIVPGSKVYRFKHSAHEPQIEETEEFNRALTQFLISEGE
                     AS"
BASE COUNT          298 a          420 c          481 g          361 t
ORIGIN      
        1 acctatcgcc tcgacaaaga aaccgccacg gcgcggtata gctcgcttgt gaagggcttt
       61 aacgacgacg gcaatctgcc ggaggacgga ctgcgcagac tcatcgaaga caccaagtcg
      121 gtgacgaaag tcgagcgtga agtcgtcctg agcgacgtcg ccgatctttc gattctacgc
      181 gaggtgcaga gggagctggg catcaaggtg aagtaactta gtcgtggcct gccacagatg
      241 cagttacttt tgatatagct tggccacgaa gccgcttttt tcgatctcgc gcataatcgt
      301 gccgtcgatg aactgttccg gtttggccgc cttggcgcgg ggatcttttt ccgccatcca
      361 ggtgagctgg gtttggatcg ccgcgggcga gggatgggga atctggggat atagttcttt
      421 gtagagcttg tagacttctt cgagcgcttc gcggtcgtct atcttcagat acttactcag
      481 cgcccggatc gagggctccg ggttctgttt gaccatgtag ataccttcga cgatggcgcg
      541 catgtagcgg gtgatcacct cgggttgggc tttcagatag gcgcggctgg tgatcacttc
      601 gagttgcggg aagggaatat cgtactgggt ggggtcgacg aggatggtga agccggcttt
      661 cttgccgata ttgaaaaatt ccggcgtcaa cacggtgcag tcgacgctgc gcttgcttaa
      721 cgccgatagc cgcgtgctcg tgccgccggt ctgcaaaatg gtgacatctt tgtcgggcgc
      781 caatccgtag cgctgcaaga tcaaacgcgc cgccagatcg gatgcgctgc caaagcggga
      841 caccgccaag cgtttgcctt tgagctgttc gatggtcttt atttcttttt gcgccagcag
      901 cgcgtagggc atgcggcttt cgatgctcga gatcgacacg atatcgctgc ccgccagatt
      961 gctactgact gcaacggtgc cgccgcccat ggcgatttgc gtctctccgg cggtgagcgc
     1021 ctggacggtg gtgacgccgc tctcgatcaa aacgacgtcg acgctgagcc catgcttctc
     1081 gaatatcttg gcttccttgg ccagccaata agccgccatg ttggcggtca gcgcgctgta
     1141 ggcagtcttg aggcgggtaa cctgggcgtc ggcgttcgcc gaagccagcg cgctcgccaa
     1201 aaggatcaga ccgattggtc cgatccgccg gatccgtctg atcttcatga tgcctcaccc
     1261 tcgctgatga gaaattgcgt cagcgcgcgg ttaaactctt cagtctcctc gatctgcggt
     1321 tcatgggccg aatgtttaaa gcgataaacc ttggagccgg gaacgatttt ttgaaaattg
     1381 acatcccaat cgctctggtt gagcggatca tgttcgcagg acatgagcag cagcgggatg
     1441 gtcagccgcg atagttgctt gacaaactca tcggtggtcg agcgcacttg atgcgccggg
     1501 ctgcgcaagc gcgccgctga aagcgtttcc caggcgccgg gcaggctcga gctttcatag
//
LOCUS       DATIRS010001260         3798 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_95085, whole genome shotgun sequence.
ACCESSION   DATIRS010001260 DATIRS010000000
VERSION     DATIRS010001260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3798
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95085"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..796
                     /locus_tag="VLM90_16240"
     CDS             <1..796
                     /locus_tag="VLM90_16240"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: protein motif:HMM:NF000940.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HSQ14577.1"
                     /translation="DKALVICAVPSHAVRAVFTAAAHQFDRQTLLLCGTKGLEERTLQ
                     TMAELFGEILGAATKERHGFLSGPTFAIEVAQGLPAAVTVASTSENVALSIQELLSTA
                     SLRVYTSLDVVGVQIGGVVKNVIAIAAGISDGLGLGQNARAALITRGLAEITRLAVRM
                     GADPTTLAGLPGLGDLVLTFAGDLSRNRAVGLQIAAGKSLQEITSSTRTVAEGVRNTR
                     ALHALAQRLAVEMPIVEQMYQVLYGAKRPADAARDLMQRSLKPEAG"
     gene            871..1035
                     /gene="rpmH"
                     /locus_tag="VLM90_16245"
     CDS             871..1035
                     /gene="rpmH"
                     /locus_tag="VLM90_16245"
                     /inference="COORDINATES: protein motif:HMM:TIGR01030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HSQ14578.1"
                     /translation="MSKRTYQPSNIRRKRTHGFLARMATPGGRNVIRRRRAKGRKKLT
                     VSVPPKRART"
     gene            1051..1410
                     /gene="rnpA"
                     /locus_tag="VLM90_16250"
     CDS             1051..1410
                     /gene="rnpA"
                     /locus_tag="VLM90_16250"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: protein motif:HMM:NF013022.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HSQ14579.1"
                     /translation="MKDNQAFPKSARLRKRREFLRLSRSGHKIHSANFVVISKTSDHA
                     ESRVGITVSGKVGNSVIRNRIKRQIREFFRRRRAALPQAVDFLVIARKSAVNLPSSML
                     DAELAKSFSPPRGRRMV"
     gene            1415..1627
                     /gene="yidD"
                     /locus_tag="VLM90_16255"
     CDS             1415..1627
                     /gene="yidD"
                     /locus_tag="VLM90_16255"
                     /inference="COORDINATES: protein motif:HMM:NF013932.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HSQ14580.1"
                     /translation="MIRWLLILPIRVYRLSVSPWLPPACRFYPSCSAYAQTAIHRHGA
                     VKGLLYTLWRFCRCHPFSAGGYDPVS"
     gene            1637..2650
                     /gene="yidC"
                     /locus_tag="VLM90_16260"
                     /pseudo
     CDS             1637..2650
                     /gene="yidC"
                     /locus_tag="VLM90_16260"
                     /inference="COORDINATES: protein motif:HMM:TIGR03593.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0051205 - protein insertion into membrane
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
     gene            2633..3265
                     /gene="yidC"
                     /locus_tag="VLM90_16265"
     CDS             2633..3265
                     /gene="yidC"
                     /locus_tag="VLM90_16265"
                     /inference="COORDINATES: protein motif:HMM:TIGR03592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0051205 - protein insertion into membrane
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HSQ14581.1"
                     /translation="MLHFFHRFTGSYGIDIIILTVLIKLIMWPLTHKSFSSMKSMQKL
                     GPQMEKLKERFANDKEKLNKEIMDLYKRNGVNPLGGCLPMVLQFPVFIGLYNALSTPI
                     ELRHASFMWIQDLSRPDWEALQFTVPGWWPSLLPSGIPILTIVMGATMFIQQWMTPSA
                     GDPNQRRIMMLMPLMFTFMFVSFPAGLTVYWLVNNVLSIAQQYWINRSDK"
     gene            3282..>3798
                     /locus_tag="VLM90_16270"
     CDS             3282..>3798
                     /locus_tag="VLM90_16270"
                     /inference="COORDINATES: protein motif:HMM:NF026154.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Jag N-terminal domain-containing protein"
                     /protein_id="HSQ14582.1"
                     /translation="MDFVETEGDNIDTAIENALKALGVGREKITVEIISEGRKGILGF
                     GAQKAKIRASLRKLNLEPNVAAVKPPAVQAPTSAPEPRSQPPERRAPEPRRPAPPRVE
                     PRARVPEPRQRTPERPRPEPRADAAPRPTAVPRPDAEPRPIDAPPPLTSAEVAAMVEK
                     AKTALVEILNLM"
BASE COUNT          783 a         1133 c         1106 g          776 t
ORIGIN      
        1 cgacaaagcg ctggtgattt gcgccgtgcc atcccatgcc gtgcgcgcag tattcaccgc
       61 cgcggcacac cagttcgacc gccaaactct tttgctatgc ggcaccaaag gtctggaaga
      121 acggacactg cagaccatgg cggagctgtt cggcgaaatt ctcggcgccg caaccaagga
      181 acgccatggc tttctttccg ggccgacctt tgcgatcgaa gttgcccagg gcttgccggc
      241 cgcagtgaca gtcgcttcca cttcagaaaa cgtggcgctc tccatccaag agctgctcag
      301 caccgccagt ctgcgggttt atacctccct cgatgtggtc ggcgtgcaaa tcggcggcgt
      361 ggtgaaaaat gtcattgcca tcgccgctgg cattagcgat ggtctcggcc tcgggcagaa
      421 cgccagggcg gcgttgatca cccgcggttt ggcggaaatc acccgtttgg ctgtacgcat
      481 gggtgccgat ccgacgacct tggcgggatt gccaggtttg ggcgatttag tgctgacctt
      541 tgccggtgac ttgagccgca accgcgcggt gggtttgcag atcgccgccg gcaagagttt
      601 gcaagagatc acgagttcga ctcgcaccgt ggctgaaggg gtacgcaata cccgcgcgct
      661 gcacgctttg gcccagcgtt tggcggtgga aatgccgatc gtcgagcaga tgtaccaagt
      721 gctctatggc gctaagcggc cggccgacgc ggcgcgcgat ttgatgcaac ggtcgctaaa
      781 acccgaggcc ggttaaaatt gacttcgcct ggacggtatg attgatatag tcacttggct
      841 gtgcaggcgg cctgaagggg aagtagtctt atgagcaaac gaacgtatca accgagcaac
      901 atccgtagaa agcgcactca cggctttctc gcgcgcatgg cgactccggg cgggcgcaat
      961 gtcatcagac ggcgccgcgc caagggacgc aaaaaattga ctgtgtcggt gccacccaag
     1021 cgggcgcgca cctaaccaca ggggaaggcg ctgaaggata atcaagcgtt cccgaagtcg
     1081 gcccgcctga gaaaacgacg cgaatttttg cgattatcgc gatccggtca caagatccat
     1141 tccgcaaact ttgtcgttat cagcaaaact agcgatcatg ccgagtcccg cgtgggaatc
     1201 accgttagcg gtaaggttgg caactcagtg atccgcaatc ggatcaaacg gcaaatacgg
     1261 gagttcttcc gccgccgccg cgcggcattg ccgcaagcgg tggatttcct cgtcatcgcg
     1321 cgtaaaagcg cggtgaacct gccgtcgagt atgctcgacg ccgaattggc caaaagtttc
     1381 tcgccgccac gcgggcgccg gatggtttaa ccgcatgatc cgctggttat tgatcttgcc
     1441 gattcgcgtc tatcgcctgt cggtctcgcc ctggttgccg cccgcttgcc ggttttaccc
     1501 cagttgctcg gcctatgcgc aaacggcaat tcaccgtcac ggtgcggtca aaggtctgct
     1561 ctacactcta tggcgtttct gccgctgcca cccttttagc gccggcggat acgatccggt
     1621 cagttgaact taatcaatgg ataaacgcgc actcatcggc atcgcattat cggtcctggt
     1681 cttggtcggt taccaagaat ttattagccg ttattatggc ccgccgccga cagttccggc
     1741 gccggccgcg gaaaaggcgg acgccgctgc gccgtcctcc ggcgctactc ccgccgcgcc
     1801 cagcgctgtc ccggcgcaag ttgcgccggc tgtcgcaccg cctggccaag cggctcgaaa
     1861 cattcaggtt gaaaccgata actacatcgc cgttttcacc agccacggcg cgcgcctgaa
     1921 aagctttcag ttcaaaaact atcgcgccag cgcggatact aaaagcccgc tccaggaaat
     1981 aagtgccacc gcgaaagatg tgccgttgcc gctcggtgtg cgctggcagg cgccggcgcc
     2041 attcgatgat gcaagtttgt cttactccgt tcagggcgcc gatcttaaac tcacaggcga
     2101 agccaagggt accttggtat ttcaaggcca gaccgccgat ggcgcgacga ttaccaagtc
     2161 tttgacattt accggcaatg tttagcctat ccagttcgat gttgccgttc agtccgccgc
     2221 ggccactgcg ccggttccag aagtttttct gaccgacaaa agcgatcata ccgtggtcaa
     2281 tcccggcgcg ccgttcgaag gcttcgtcgc cttggtcgat aacaagatca agcgcgaggc
     2341 gacggtggac gcgagtaagg gacatgagtt tagcggcgac gtcgcctggg ccggtttcgg
     2401 ccacacttat tttttcgtgg ctttgatgcc ggaaaatggc gccgggcaca aagtttcggt
     2461 gcggcaaaat ggcgccgcgc tcgtcgcttc gctgagcgga ccggcggccg gcggccgcta
     2521 tcgtctgttc atcggaccca aagaactcga actcctaaag tcggtgggca aggacatcga
     2581 tcgtgccatt gatcacggct atttcggctt cgtctcggtg ccgctgctct acgtgctcca
     2641 cttctttcac cgtttcaccg gcagttatgg gatcgacatc attatactga cggtgctgat
     2701 caagctgatc atgtggccgt tgacgcataa gagctttagt tccatgaagt cgatgcagaa
     2761 gcttgggccg cagatggaaa agctcaaaga acgcttcgcc aacgacaaag agaaactcaa
     2821 taaagagatc atggatctgt acaagcgtaa cggcgtcaat ccgttgggcg gctgcctgcc
     2881 gatggtgctg caatttccgg ttttcatcgg tctgtacaac gcgctcagca cgcccatcga
     2941 gctgcgccat gcgtcgttta tgtggattca agatttgtcg cggcccgact gggaagcgct
     3001 gcagttcaca gttcccggct ggtggccttc gctcttgccg tccggcattc cgattctcac
     3061 cattgtcatg ggcgccacca tgtttatcca acaatggatg acgccgtcgg cgggcgatcc
     3121 caaccagcga agaataatga tgttgatgcc gctcatgttt accttcatgt tcgtgtcgtt
     3181 tcccgctggc ttgaccgttt actggctggt gaacaacgtg ctgagcatcg cgcagcagta
     3241 ctggatcaat cgcagcgata agtagccgag gaaggtcagt tatggatttc gtcgaaaccg
     3301 aaggcgataa catcgacact gccatcgaaa acgcgctcaa ggcgctcggt gtggggcgcg
     3361 aaaagatcac agtcgagatc atttccgaag gtcgcaaagg gatactcgga ttcggcgcgc
     3421 agaaagccaa gattcgcgcg tcactgcgca agctcaatct cgaacctaac gtcgcggcgg
     3481 tcaaaccgcc agctgtgcaa gccccgacaa gtgcgccgga acccagatcg cagccgccgg
     3541 agcgacgcgc ccccgagcct cgccggccgg cgccgccgcg agtcgagccc agagccaggg
     3601 taccggaacc aagacagcgc acacccgaac gtcctagacc tgagccgcgt gcggatgccg
     3661 cgccgcggcc gactgcggtg ccacggcccg acgctgaacc acggccaatc gatgcgccgc
     3721 ctccgctcac atccgctgaa gtcgcggcga tggtcgagaa ggccaagact gcgctggtag
     3781 aaattctcaa cctgatgg
//
LOCUS       DATIRS010001261         2506 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_390862, whole genome shotgun sequence.
ACCESSION   DATIRS010001261 DATIRS010000000
VERSION     DATIRS010001261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2506
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_390862"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..848
                     /locus_tag="VLM90_16275"
     CDS             <1..848
                     /locus_tag="VLM90_16275"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: protein motif:HMM:NF001484.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="isomerizing glutamine--fructose-6-phosphate
                     transaminase"
                     /protein_id="HSQ14583.1"
                     /translation="SEFRYRSPLMDPKSVLLMVSQSGETADTLAAVDIARAKRAKILS
                     ICNVIDASIPRKSDGVLYTHAGPEISVASTKAFTTQLTAIYLLAVALGRLNGKLKAEA
                     ARKLLRDLMHLPSWIESALEIENEVKELARELMHSQDFLYLGRGINYPIALEGALKLK
                     EISYIHAEGYPAGEMKHGPIALIDEKMPVVVLAPRDRYFQKTISNLKEVESRGGKVVV
                     FTDDAKTGKEMAAHRVLTLPKASHYLTPIVMTIPLQLLAYYIAVHRGTDVDQPRNLAK
                     SVTVE"
     gene            872..2119
                     /locus_tag="VLM90_16280"
     CDS             872..2119
                     /locus_tag="VLM90_16280"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ14584.1"
                     /translation="MNLERTLSSLRHRDYRLLFFGTSLSHVGDFVQAMAQSWLVWTMT
                     SSPFLLGVVGFCQALPRLMLGAVGGAIVDRIERRRLLISTQILAMLQAFVFWALVYFD
                     GIQFWHVMALVLFLGTVNTINQTARHSLINSLVPRDDLMNAIALNSSMANLAKIAGPS
                     LGGVLISVIGVAGCLFVNAVSFLAIIVTLLVMVFPSVSLRSNDEAPFWEEVREGYRFL
                     RGQRRLFSIILLTYGVALVGTPYSRFLPVFATDVLHAGPSTFGLLLAAPGIGAVIAGL
                     GIASFGRLRRRLHFVTMSVYAFSLFLILFSFCRSLPLSILFLILVGASNIAFRAVANS
                     IVQMETPPELLGRMLSLFFMDKGMWSFGTLFIGSVAHIVGTPNAIAISGICCALAASV
                     LLYQQRQARENQPEETLNHRPAQ"
     gene            complement(2096..>2506)
                     /locus_tag="VLM90_16285"
     CDS             complement(2096..>2506)
                     /locus_tag="VLM90_16285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14585.1"
                     /translation="YCEMIEKEIAYRERLVSNHDRLIVLCPFAPRFAYETWILPRVHA
                     PVFEESSEPDAIALARTLRDTLARLNQTVDEPPFNYVIHTSPIEDPASSHYHWRMEIM
                     PQLTRAAGFEWGSGTHINPVAPEVAAGLLRRAVV"
BASE COUNT          469 a          724 c          724 g          589 t
ORIGIN      
        1 gctcggagtt tcgctatcgc tcaccgctga tggacccaaa atcggtgttg ttgatggtca
       61 gccaatccgg cgaaaccgcc gacaccttgg cggcggtcga tatcgcgcgc gccaagaggg
      121 cgaaaatcct ctcgatctgc aacgtcatcg acgcatcgat tccgcgcaaa tcggacggtg
      181 ttttgtatac ccatgccggt ccggagatca gcgtggcgag caccaaagct ttcaccacgc
      241 aattaaccgc gatttatttg cttgccgtcg ccttgggccg gctcaacggc aagctcaaag
      301 ccgaggctgc gcgaaagtta ttgcgcgatc tgatgcatct accgagctgg atcgagagcg
      361 cgctggaaat cgaaaacgaa gttaaagaac tggcgcgcga actcatgcac agccaggatt
      421 ttctttatct cggccgcggc atcaattatc caatcgccct cgaaggcgcg ctcaagctga
      481 aagagatctc ttacatccat gcggaaggct atcccgcggg ggagatgaag catgggccga
      541 tcgcattgat tgacgagaaa atgcccgtgg tggtgttggc gccgcgcgat cgttattttc
      601 agaagaccat cagcaatctc aaagaagtgg agtcgcgcgg cggcaaagtc gtggtgttta
      661 cggacgatgc caagaccggc aaggaaatgg ccgcccatcg agtcttgacc ctacccaaag
      721 cgtcgcatta tcttacgccc atcgtgatga cgattccgct gcagttgctg gcctattata
      781 tcgcagtgca ccgcggtacg gacgtcgatc agccgcgcaa tctcgccaaa agcgtcacgg
      841 tcgaataatg gccctcttcg gacgagggtc gatgaatctg gagcgaacgc tcagctcgct
      901 ccggcaccgc gattatcgtc tgctgttttt cggcaccagc ctgtctcacg tcggcgattt
      961 tgtccaagcc atggcgcaaa gctggttggt ttggaccatg accagttcgc cgttcttgct
     1021 cggcgtcgtc ggtttttgcc aggccttgcc gcgactgatg ctgggcgcgg ttggcggcgc
     1081 catcgtcgat cggattgagc gccgccggct gctgatctcg acacaaattt tggcgatgct
     1141 ccaagcgttt gttttttggg cgctggtcta cttcgacggc attcaattct ggcatgtgat
     1201 ggcgttggtt ttgttcctcg gcaccgtgaa tacgatcaat caaaccgcgc gtcactcgtt
     1261 gatcaatagt ctggtcccgc gcgacgatct catgaatgcc atcgcgctca attcgtcgat
     1321 ggccaatctg gccaagatag ccggtccatc cctgggcggt gtgttgatca gcgtcatcgg
     1381 cgtcgccggc tgtttgttcg tcaacgccgt gagttttctc gccatcatcg tgacgctgct
     1441 ggtcatggtg ttcccatcgg tcagtttaag gagcaacgac gaagcgccat tctgggagga
     1501 ggtgcgtgaa gggtaccgtt ttctgcgcgg tcaacgccgg ctcttttcta tcatactgct
     1561 gacctacggg gtagctctcg tcggcacgcc ctactcacgc tttctgccgg tgtttgccac
     1621 cgacgtgctc cacgccgggc cgtcgacctt cggcttgctc ctcgccgctc cgggtatcgg
     1681 cgcggtgatc gccgggttgg gaatcgcgtc gttcggtcgg ctccgacggc gcctgcattt
     1741 cgtcaccatg agcgtctacg cgttctcgct attcttgatt cttttttcgt tttgccgttc
     1801 tttgccacta tcgatattgt ttctgatatt ggtcggtgcc agcaatatcg cctttcgcgc
     1861 agtggccaat tccatcgtgc aaatggaaac gccacccgag ttgctcggcc gcatgctgag
     1921 cctgtttttc atggacaagg ggatgtggtc gttcggaacg cttttcatcg gcagtgtcgc
     1981 tcatatcgtc ggcacgccga acgcgatcgc gatctcgggg atttgctgcg ctctggcggc
     2041 ttcggtgttg ctctatcagc aaaggcaagc gcgggaaaac cagcccgagg aaactctaaa
     2101 ccaccgccct gcgcagtaaa ccggcggcaa cttcgggagc caccggattg atgtgcgtgc
     2161 ccgagcccca ttcaaacccc gccgctcggg tcaactgcgg catgatttcc atgcgccagt
     2221 ggtagtgact gctcgccgga tcttcaatgg gactggtgtg gatcacgtag ttgaacggcg
     2281 gctcgtccac ggtttggttc aggcgcgcga gggtgtcgcg cagcgtgcgc gccagggcga
     2341 tggcatccgg ctccgagctc tcctcgaaca ccggcgcgtg aaccctgggc aaaatccaag
     2401 tttcgtaggc gaagcgcggc gcgaacggac agagcacgat taaacggtca tggttcgaca
     2461 ccaatcgctc tcggtatgcg atttcctttt caatcatctc gcagta
//
LOCUS       DATIRS010001262         2896 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_292314, whole genome shotgun sequence.
ACCESSION   DATIRS010001262 DATIRS010000000
VERSION     DATIRS010001262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2896
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_292314"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..181)
                     /locus_tag="VLM90_16290"
     CDS             complement(<1..181)
                     /locus_tag="VLM90_16290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14586.1"
                     /translation="MLVPNGGLKNVVVFIESAPVGKAADPVKENFLYNDGCRYVPHVL
                     AFHLGEKLKVKNNDPK"
     gene            672..2642
                     /locus_tag="VLM90_16295"
     CDS             672..2642
                     /locus_tag="VLM90_16295"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HSQ14587.1"
                     /translation="MASQPTVLIVNDDPLQLRISATILRRDGFNVLSRPSAEEALRLL
                     AEPSAINVIVTDLYMPGIDGWRFCRLLRSAAFAQFNRIPILVVSAIFSGADAEELTVQ
                     LGADGFLAAPYEPATLCRAVRGLLVDTKPVSAKTVLLAEPDAGLAQELTALFTAAGYR
                     VSLVVDGAQALSRFNQEPSQIVLLDGDCAEVMAPGLIETIKQPGTATVVIVMTSANSA
                     DLAMDLLRKGADNQMQKSAVRQELLQLCESAVRQRALLRIEELLQIRTQRLRDSEERY
                     RGLFENAGNGIATYTLDGVIVSVNGALEALMAATRDVLAGKSYSRLMTTTSYCDAKKA
                     QEDARTGNRDSWVCTLELACSDGPVVPVESHCRFVRGKDGVPALVMATYRDLTAERQL
                     ERQRAEFTAMLAHDIRNPVGLICGYAEFLLREQGAPVDAAMARKCHERIFNAAQVIES
                     LVSNYLDFARIEAGHLDLSKRRFELGELLQRIGERFEGAAQMRGIRFQLHAQPTGIFV
                     DGDTLALDRVIANLLNNAFKFTPDNGAISLSVMRRDGAAMVKVCDSGPGIAAERLPSL
                     FQKFNRIELADRQEGVGLGLYIVSELVGAHGGKVEVASTPGVGTCFSLVLPLADRARV
                     SLPDENSQMNSEGMRKLDYEANSIDPETQCSK"
BASE COUNT          562 a          811 c          905 g          618 t
ORIGIN      
        1 gcttgggatc gttgtttttg acctttaact tctcgcccag gtgaaacgcc aggacgtggg
       61 ggacgtagcg gcaaccatcg ttgtagagaa agttttcttt cactggatcg gccgcttttc
      121 ccaccggcgc cgactcgata aagacgacaa cattcttgag gccgccgttt ggtacgagca
      181 aatacgtctc gttaggcagt gtctcgccgc agtaatcttg atccttgctt actttgacca
      241 gcggaagttt gggcggggcg tccgcgaacc cgaccgcgcc gacgatcggt cctgcgtgag
      301 tgtcgacaaa gatcgtttcg ttagctcggc cggtcgaggg gcattaagtt tctgcaaatg
      361 gcgtcaagtg ccaagcaacc gttcaccccg ctacgccgct gcgcaacttg gggcggcagc
      421 gcaatctcgt gtgaattctc ccgctaacgc gcgatctgcc gcgacattac ttaagacttg
      481 cggcgctggg ccgatttaac ctcagatgaa gcttcgcgcg cagtccgtta tggcgtgggc
      541 aagccggccg caattaggat ttttgccccg gcgagcaaag ctgtggagat tggcgtgagg
      601 gaaccgttag atcaaaactg cgcgggaggg tgtgccgcgc aatcatagtc ggtcgagaca
      661 accaggagtt tatggcaagc caaccgacgg tactgatcgt caacgacgac ccgctccagt
      721 tacgcatctc cgcgacgatc ctgcgtcgtg acggttttaa cgtgctctct cgcccgagcg
      781 ccgaggaggc tttgcgcctg ttggccgagc ctagcgctat caatgtcatt gtcaccgatc
      841 tgtatatgcc gggcatcgat ggctggcgtt tctgccggct cctgcgctcg gccgcctttg
      901 cccagttcaa tcgcatccct attctcgtcg tgtcggcaat tttttccggg gctgacgccg
      961 aggaattaac cgtccaattg ggcgccgacg gctttctcgc cgcgccctac gagccggcga
     1021 cgttatgccg cgcggtgcgc ggtttgctgg tcgacaccaa accggtttcc gcgaagaccg
     1081 tgctgctggc cgaacccgac gccggcttgg cgcaagagct gacggcgctt ttcacagccg
     1141 cgggttatcg cgtgtcactg gtggtggacg gcgcccaggc gttgtcccgg ttcaatcaag
     1201 agccgagcca aatcgtcttg ctcgatggcg attgcgccga ggtcatggcg ccagggctaa
     1261 tcgaaacgat caagcagccg ggcacggcga cggtggtcat agtgatgacc tcggcgaact
     1321 ccgccgacct ggccatggat ctgctacgca agggcgcgga caaccagatg caaaaatctg
     1381 cggtgcgcca agagctcttg cagctatgcg aaagcgcggt gcgccaacga gcactgttgc
     1441 gcatcgaaga gctcttgcaa atccgcaccc agcggctgcg cgacagcgag gagcgctatc
     1501 gtggcctgtt cgaaaacgcc ggcaatggca tcgccaccta cacgctcgac ggcgtcatcg
     1561 tcagcgtcaa tggcgcgctg gaagccctca tggcggcgac ccgtgacgtt ttggcgggca
     1621 agtcctacag caggttgatg accaccacgt cgtattgcga tgccaaaaag gcccaagagg
     1681 atgctcgaac cggcaaccgg gactcttggg tgtgcacctt ggagttggcg tgctcggatg
     1741 gtcccgtcgt gccggtcgaa agtcactgcc ggtttgtacg cggcaaggat ggcgtgccgg
     1801 cgctggtcat ggcaacctat cgcgatctca cggcggagcg ccagctcgaa cggcagcgcg
     1861 ccgaatttac cgccatgttg gcgcacgata tccgcaatcc ggtgggcttg atttgcggct
     1921 acgccgaatt cttgctgcgc gagcagggcg cgccggtgga tgcggccatg gcccgcaagt
     1981 gtcacgaacg tatttttaac gccgcgcagg tcatcgagtc gctggtcagc aactatttgg
     2041 atttcgcccg tatcgaagcg ggccacctcg atctttccaa gcggcgcttc gaactgggtg
     2101 agctgctgca gcgcatcggc gagcgcttcg agggcgcagc gcaaatgcgc ggcattcggt
     2161 tccagttaca cgcgcaaccc actggcatat tcgtcgacgg cgacaccctg gcattggacc
     2221 gggtgatcgc caatctgctc aacaatgctt tcaagtttac tcctgacaac ggcgccatca
     2281 gcttgagcgt catgcgccgc gatggcgccg cgatggtcaa ggtgtgcgat agcggaccgg
     2341 gaatcgcagc ggagaggctg ccgagcttgt tccaaaaatt caaccgcatc gagcttgccg
     2401 atcgccagga aggtgtcggc ttgggtctgt atatcgtcag cgagttggtc ggcgcccatg
     2461 gtggcaaggt ggaagttgcc agcacgccgg gtgtgggaac ttgtttctcc ttggtcttgc
     2521 cattggccga tcgcgcacgg gtctcgttgc cggacgaaaa ttcgcaaatg aacagtgaag
     2581 gaatgaggaa gctggattac gaggcaaatt caattgatcc agaaacacaa tgttccaaat
     2641 aattccgatt cggatagctc attttggaat tgttcggggt tattccatgg ggccgcgatt
     2701 tgtggcggtc cgccgggccg cttcagggat tggaattttg aatttttaaa tcgagtcgat
     2761 ggagggttcg gcgttggaac agcaggggat agaaaatgcg attcgtgaca aggccaggga
     2821 atgggctgcc gagtatggcg aggattttgt cgttgagtta gccggcgatt ttctcagcga
     2881 tgcggccgcg cggatg
//
LOCUS       DATIRS010001263         1607 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1472742, whole genome shotgun sequence.
ACCESSION   DATIRS010001263 DATIRS010000000
VERSION     DATIRS010001263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1607
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1472742"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(54..>1607)
                     /locus_tag="VLM90_16300"
     CDS             complement(54..>1607)
                     /locus_tag="VLM90_16300"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HSQ14588.1"
                     /translation="TIDADGFVVSPGFIDHHTHMDGQILWDPFGTCEPQHGVTSIIMG
                     NCGLALAPVKNGDEDAIVKSFVRVEAIPRVALEKGVPWGWKSYGDYLNKLEGNVGINV
                     GGIVGHIAVRQFVMGEESTERKATAGEVDKMRQAVGEAMGAGAFGLSTNRNERHMRED
                     GLPVPSRLADDDELFALCEVVSASNSGVIQMNMGRHCVEQIPQYDELARRVGRPIVWQ
                     SVQYKESEPELWQNMLNGIAKTFAAGYQAYGLTHTVPLMRHFTMKDAQIFDEFPLWKN
                     LMFLPEAARKLAFADPATRQKMRDDMAEPRPVSFHKNWGRVFVEQVVKAENQKYAGKS
                     VADVAALRKQDALDAFLDLALEEDLATTFETTNRGFNPEAMSTIMKSPYVVIGTSDAG
                     AHVQFGADFGYCTTLLGMWVRDRQMIGLEQAIHKLTFHVASIWGIEGRGLLRPGFHAD
                     VTVFDPKTIKACAPEWADDYPAATKRLIQRAEGVHYTIVNGKVIYDDGKLSGEMAGKV
                     LRSAAHAGQ"
BASE COUNT          301 a          503 c          452 g          351 t
ORIGIN      
        1 gtaaatagat ctgattgcgg cccttgcgtt ttatgcggcc aatcccggct ctttcactgc
       61 cccgcatgcg ccgcgctgcg cagcactttg ccggccatct cgccgctcag cttgccatcg
      121 tcgtaaatta ctttgccgtt gacgatggtg taatgcacgc cttcggcgcg ttggatcaaa
      181 cgcttggtcg ccgccggata atcgtcggcc cattccggcg cgcaggcttt gatcgtcttg
      241 ggatcgaaga ccgtcacgtc ggcgtggaat cccggccgca gtaaaccgcg gccttcgatg
      301 ccccagatcg acgccacgtg gaatgtcagc ttgtggatcg cctgttcgag cccgatcatc
      361 tgccggtcgc gcacccacat gccgagcagc gtcgtacagt aaccgaagtc ggcgccgaac
      421 tggacatgag cgccggcatc cgaggtgccg atgaccacgt agggactctt catgatcgtg
      481 ctcatggcct cggggttgaa accgcgattg gtggtctcga aggtcgtggc caaatcttct
      541 tccagcgcca aatcgagaaa cgcatcgagc gcatcctgct tgcgcagcgc ggcgacatcg
      601 gcgacgcttt tgccggcgta cttttgattt tccgctttga ccacctgctc gacaaacacc
      661 cgaccccagt ttttatgaaa cgacaccggc cgcggctcgg ccatgtcgtc gcgcattttt
      721 tgccgggtcg ccggatcggc aaacgccagc ttgcgcgccg cttccggtag gaacatgagg
      781 tttttccaaa gcgggaactc gtcgaagatt tgcgcgtctt tcatggtgaa gtggcgcatc
      841 agcggaacgg tatgagtaag accgtaagcc tgatagccgg cggcaaaggt cttggcaatg
      901 ccgttaagca tgttctgcca cagctcgggc tcgctttctt tatactgcac gctctgccaa
      961 acgatcggcc ggccgacgcg ccgggcgagt tcgtcgtatt ggggaatctg ttcaacgcag
     1021 tggcgcccca tattcatctg aatcacgccg ctgttggacg cgctgaccac ttcgcaaagg
     1081 gcgaaaagtt catcatcgtc ggccagccgg ctcggcaccg gcagaccgtc ctcgcgcata
     1141 tgtcgttcat tacggttggt cgacaggccg aaagcaccgg cgcccatcgc ttcccccacc
     1201 gcttggcgca ttttgtcgac ttcgccggcc gtcgctttgc gttccgtcga ctcttcgccc
     1261 atgacgaatt ggcgcacggc gatatggcca acgatgccgc cgacgttgat gccgacattg
     1321 ccttcgagtt tgttcaaata atcgccgtag gatttccaac cccaaggcac gcctttttcc
     1381 aaagcgacgc gcgggatcgc ttcgacacgg acaaaacttt tgacgatggc gtcctcgtcg
     1441 ccgtttttta ccggcgccag cgccaaaccg cagttgccca tgatgatcga agtcacgcca
     1501 tgctgcggct cgcaggtgcc gaacgggtcc cacagaatct gcccgtccat atgggtatga
     1561 tgatcgataa aacccggcga caccacgaag ccatcggcgt cgatggt
//
LOCUS       DATIRS010001264         2574 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_784380, whole genome shotgun sequence.
ACCESSION   DATIRS010001264 DATIRS010000000
VERSION     DATIRS010001264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2574
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_784380"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..249
                     /locus_tag="VLM90_16305"
     CDS             <1..249
                     /locus_tag="VLM90_16305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14589.1"
                     /translation="ILGGIGRLHGAVIGAAAYVLLQEFFSSSALFGAYAKHWQLFMGG
                     LIIFIVLALPHGIGGLIDVAWVARRRRGGDSNAESGDG"
     gene            242..1000
                     /locus_tag="VLM90_16310"
     CDS             242..1000
                     /locus_tag="VLM90_16310"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ14590.1"
                     /translation="MAEAILQVRNLTKHFGGLAAVENVSLDVRTGEIHAVIGPNGAGK
                     STLINLLSGELRASSGEILFHGREIGALAPEQRSRLGIGRSFQKTNIFPSFTALENCR
                     LAAQSRDPRPWRWLRDAHSYESIMSKGQQALAAVALSERASDLAFALSHGEQRQLEIA
                     MCLATEPQLLLLDEPLAGMGAEESLKMVDLIKQLAATHAVLLVEHDMDAVFQLAQVLT
                     VMVDGRLLASGSAEQIRNNRDVQVAYLGEREERP"
     gene            997..1713
                     /locus_tag="VLM90_16315"
     CDS             997..1713
                     /locus_tag="VLM90_16315"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ14591.1"
                     /translation="MNDRAIVAARELHSYYGASHILHGIDFSVRPAEVVGLMGRNGMG
                     KTTLIRTLLGLVPARRGEVRIDGNIMTNAAPHRIARQGIAYVPEGRGIFPNLTVRENL
                     VMAARPATAGQTLWNSERVLETFPRLAERLAQGGQQLSGGEQQMLSIGRALMTNPRLL
                     ILDEATEGLAPLIAREIWRILGVIRATGIAAIIVDKNFAAVSAIADTNVILVKGRIVF
                     AGSGSELRSQPELMQQYLGI"
     gene            complement(1807..2154)
                     /locus_tag="VLM90_16320"
     CDS             complement(1807..2154)
                     /locus_tag="VLM90_16320"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSQ14592.1"
                     /translation="MARIRHLAIVSENRERMVKFYTEAFGLKVIDGVGPAIYLSDGYI
                     NLAIIEKRPHYKEGLYHFGMELDSIEALRPVAKELGAQTEVQKRPPNREAEYRIADPD
                     GNLIDLSEHGWPV"
     gene            complement(2254..2496)
                     /locus_tag="VLM90_16325"
     CDS             complement(2254..2496)
                     /locus_tag="VLM90_16325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14593.1"
                     /translation="MAKIRAVVVEGDRQHGYKRVQIIFGTNSFIEITENDGRVTCLLG
                     AHDGGVQADGSEAKGQFAQFVQELMERHPENVWREE"
BASE COUNT          512 a          806 c          710 g          546 t
ORIGIN      
        1 atcttaggcg gcatcggccg gctccacggc gcggtcattg gcgcggcggc gtatgtcttg
       61 ttgcaggaat tcttttcgtc gtcagcgctg ttcggcgcct atgccaagca ctggcaattg
      121 ttcatgggcg gcttgatcat cttcattgta ctcgcgctac cgcatggcat cggcggactc
      181 attgatgttg cctgggtcgc ccggcgccgc cgcggcggtg attcgaatgc ggagagcggc
      241 gatggctgaa gcgatcttac aagtgcgcaa cctcaccaag cacttcggcg gtctagccgc
      301 cgtcgaaaat gtttcgctgg acgttcgtac cggcgaaatc cacgccgtca tcggccccaa
      361 cggcgccggc aagtcgacct tgataaactt gctttcgggc gaactgcgcg catcatcggg
      421 cgagatcctt ttccacgggc gcgagatcgg cgcgcttgcg ccggaacagc gatcgcgtct
      481 cggtatcggc cggagctttc aaaagaccaa catctttccg agttttacgg cgctggaaaa
      541 ttgccgcctg gcggcgcaat cccgcgaccc gcgcccgtgg cgctggttac gcgatgctca
      601 cagctacgaa tcgatcatgt cgaaggggca acaagctctg gccgcggtgg cattgagcga
      661 acgcgctagc gatttagcct tcgcccttag ccatggcgaa cagcgccaac tggaaattgc
      721 catgtgcctg gccaccgagc cacagttatt actactcgac gaaccgctcg ccggcatggg
      781 tgcggaggag tcgctaaaaa tggtcgacct catcaaacaa ctagccgcca ctcacgccgt
      841 cctgctggtc gaacatgaca tggacgcggt gtttcaattg gctcaagtgc tgaccgtgat
      901 ggtcgacgga cgcttgctcg cctctggctc cgccgaacag atccgcaata atcgcgatgt
      961 gcaggtcgcc tacctcggcg aacgggaaga acggccatga atgaccgagc gatcgtcgct
     1021 gcccgcgagc tgcacagcta ctatggcgca agccatatct tgcacggtat cgatttctcc
     1081 gtgcggccag ccgaggtggt tggcttgatg ggccgcaacg gcatgggcaa gaccacgttg
     1141 attcgcacgc tgctcggcct ggtgccggcg cgccgcggcg aagttcgtat cgacggtaac
     1201 atcatgacca atgccgcgcc gcaccggatc gcccgccaag gtatcgccta cgttcccgaa
     1261 gggcgcggta tttttcccaa tctaacggtg cgggaaaatc tcgtgatggc ggcccggccg
     1321 gcaaccgccg gccaaactct atggaattct gagcgcgtgc ttgaaacctt tccgcgcctg
     1381 gccgagcggc tcgcccaggg cggccaacag ctttccggcg gcgagcagca aatgctgtcc
     1441 atcggccgcg cgctgatgac caacccaaga ctcttgatac tcgacgaagc caccgaaggc
     1501 ttggcgccgc tcatcgcccg cgagatctgg cgcatcctcg gcgtgatccg cgccaccggc
     1561 atcgccgcca tcatcgtcga caaaaacttt gccgccgtct cggccatcgc cgatacaaac
     1621 gtgatcttgg tcaaaggcag gatcgtcttc gcaggcagcg gcagcgagtt gagatcgcaa
     1681 cccgaactca tgcagcagta tctgggcatc taactgcgac gcttcacagt gtagaattac
     1741 aagttaatct cgctgcccgg cccgagaccc gcaaacgcga aacccgaaac cgaatgtcaa
     1801 cccgctctaa acaggccagc catgctcgga aagatcgatc agattgccgt cgggatcggc
     1861 gatgcgatat tccgcttctc ggttgggcgg ccgtttctgc acttcggttt gcgcgcccag
     1921 ctctttagcg accggccgca acgcctcgat gctgtcgagc tccatgccga agtgataaag
     1981 cccttctttg tagtgcggcc gtttttcaat gatcgccaga ttgatatagc cgtcggataa
     2041 gtaaatcgcc gggccgacgc cgtcgataac tttgagaccg aaagcctcgg tgtaaaattt
     2101 caccatccgc tcgcggttct cactgacaat cgctagatgc cgaatccttg ccatgttttt
     2161 tctcctttgg ccaaattatt agtgtaaacg atcgctgcac gccgcttgat tcaagcgccg
     2221 attcgttgcc aagccatgga tccgcttaac cgtctattct tcccgccaca cgttttccgg
     2281 atggcgctcc atcaactcct gaacgaactg ggcgaactgt cccttggctt ctgaaccgtc
     2341 cgcttgaacg ccgccgtcat gggcgcccaa aagacacgtc acccggccgt cgttttcagt
     2401 gatctcgatg aacgaattgg tgccgaaaat aatctgcact cttttgtatc cgtgctgccg
     2461 gtcgccttcg accacgacag ccctaatttt cgccatattt tacctcacga ttcgagttcg
     2521 ccgcattgcc aaatttttat cggcaccgca aatccattgc cgccagggct cgca
//
LOCUS       DATIRS010001265         1798 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1866155, whole genome shotgun sequence.
ACCESSION   DATIRS010001265 DATIRS010000000
VERSION     DATIRS010001265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1798
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1866155"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(169..>1798)
                     /locus_tag="VLM90_16330"
     CDS             complement(169..>1798)
                     /locus_tag="VLM90_16330"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HSQ14594.1"
                     /translation="SIYLPDREALLELMIRLSLGRVDGIKVPKKQAAVARDIRAMMQL
                     VGGQTATVEDAAEATLRIYARLARIKNDYLAEEQFIFLELADKSSSRSKRSSRSNRWE
                     DQEEIAVLPELNGREREYLAPQGVDYRGEFRPELAQLLTKAQANSREQRKSLTPEELA
                     DLLRSQRAPKPRDGEDDGDEQDPQTSQMVQNLLKELDQRDPRMQSVTRRPSPSNDDDS
                     GPLSATQPNTFIYDEWDAAGRKYRERWCKVYEKSLGSGDLTFYRETLLSHAGLSQQIR
                     REFELVVPELYHKEKRLPEGSDHDLDLAIEALTDFRIGISPSEKIFWRHHKIERDVAV
                     AFLIDMSGSTGEAIKTAGDKPLPGNAPGAERSQRRIIDVEKEAIVLMMDSLEAIGDRY
                     GVYGFSGHGRDNVEFYVIKDIEESFSMDVAKRLGRIGPLHATRMGPAIRHTTAKLRRQ
                     QSQSKFLFLISDGRPQDRGYSQEGAEKAHAVQDTRMAMIEARREGIHPFCLTVDKDGN
                     DYLRTMMDDFSYEVLADVSLLPRRLPQLYKKLTT"
BASE COUNT          337 a          549 c          493 g          419 t
ORIGIN      
        1 ataattttgt atttcgtctc cattactgaa ttctccaatt ccgtaacgtc cgaacatttg
       61 gtcgcggttc gatttcggaa tcctgtgtag gggcgatccc ctgtggtcgc cctttccgga
      121 gggcagacac aggggtctgc ccctgcaacg atttgaagag gttatttttt aagtcgtcaa
      181 tttcttatac aactgcggca accgccgcgg caacaaactg acatcggcca atacttcgta
      241 gctaaagtca tccatcatgg tgcgcaaata gtcgttgccg tccttatcca cggtcagaca
      301 aaacggatga atgccctcgc gccgcgcttc gatcatcgcc atgcgcgtgt cctgcaccgc
      361 gtgtgccttc tcggcgccct cttgagaata gccgcgatcc tgcggccggc cgtcgctgat
      421 caagaacaga aatttcgact ggctctgctg tctgcgcagc ttcgccgtgg tatggcggat
      481 cgccggaccc atacgcgtgg cgtggagcgg accgatgcgg cccaagcgtt tggcgacgtc
      541 catggaaaac gactcttcta tatccttgat cacgtagaac tcgacgttgt cgcgcccatg
      601 gccggagaaa ccgtaaaccc cgtagcggtc gccgatggct tcgagggaat ccatcatcaa
      661 tacaatcgcc tctttctcga cgtcgatgat gcgccgttgc gagcgctccg cgcctggcgc
      721 gttgccgggg agcggtttat cgccggcagt cttgatcgcc tcgcccgtcg agccgctcat
      781 gtcgatcaag aaagccaccg cgacatcgcg ctcgatcttg tgatggcgcc aaaagatttt
      841 ttccgacggg ctgatgccga tacggaagtc ggtcagcgcc tcgatggcca ggtcgagatc
      901 gtgatccgaa ccttcgggca agcgtttttc cttgtgatag agttccggca ccaccagctc
      961 gaactcgcgg cgaatctgct gcgacaaacc ggcgtggctc aacaacgtct cgcggtaaaa
     1021 ggtcagatcg ccgctgccca agcttttctc gtaaaccttg caccagcgtt cgcgatattt
     1081 acgccccgcg gcatcccatt cgtcgtagat aaaagtattc ggctgcgtcg ccgacaacgg
     1141 cccggagtcg tcgtcgttac tgggcgacgg ccggcgcgtc acgctctgca tgcgcggatc
     1201 gcgctggtcg agttccttta agagattctg caccatctgg ctggtctggg gatcctgctc
     1261 gtcgccgtca tcttcgccgt cgcgcggttt gggcgcgcgc tggctgcgca gcaaatccgc
     1321 caattcttcc ggagtcagag atttgcgctg ctcgcgcgaa ttggcctgcg ccttggtcag
     1381 caactgcgcc agttccgggc gaaactcgcc gcgataatcg accccctgcg gcgccaggta
     1441 ttctcgctca cgcccattca attctggcag caccgcgatt tcttcttgat cctcccaacg
     1501 gtttgaacga cttgaacgtt ttgagcggct tgaactctta tctgccagct ccagaaagat
     1561 gaactgctct tcagccaaat agtcgttttt aatccgcgcc aagcgcgcat agatccgtaa
     1621 tgtcgcttcc gcggcgtctt cgaccgtggc ggtttggccg ccgacgagct gcatcatcgc
     1681 tcggatatcg cgggcgacgg ccgcctgctt cttggggact ttgatgccat cgacgcggcc
     1741 gagactgagc cgaatcatta attccaatag cgcttcgcga tccggcagat agatcgat
//
LOCUS       DATIRS010001266         2506 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_95639, whole genome shotgun sequence.
ACCESSION   DATIRS010001266 DATIRS010000000
VERSION     DATIRS010001266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2506
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95639"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..651
                     /locus_tag="VLM90_16335"
     CDS             <1..651
                     /locus_tag="VLM90_16335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14595.1"
                     /translation="RGDLKPLAQRNAMTIGDDDFPGDVAKLIKALEALPGLAKPTRQP
                     ADQWKADLRQRLRRRLVWKIPLIILLVSFAAWWQWRKDAVPLSSNAQQTAAAKIAAAL
                     SGTWRGDVTYPWGDKYSERFLFTAEGAKLFGIATFLASKRAIEDGQIAGETILFRVRF
                     EEVSGGDSRTRLNRYEGKLLGDEIQLRVFDDKGSPPVEINLTRSADDGTAVDAAKR"
     gene            721..1833
                     /locus_tag="VLM90_16340"
     CDS             721..1833
                     /locus_tag="VLM90_16340"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HSQ14596.1"
                     /translation="MDQEIISRLKQRVIAEGLDAIVAMSPENVTYVSGLVVPSQSLMR
                     WRHAACIVTADGRISMIAIDMEATTVKAHAGIDDLRIYREFSDDPMDKLAEALKDLKL
                     DHSTVAIELEFLPAKDFATLQKSLPRVQWLAADGVFNKARQIKTPGELALLRSLSKLT
                     DNAIGTALRSAKIGMSEMELAGTLLTTLFAGGAESYKLMIIASGERSEFPNVGPSERK
                     LKPGDIIRMEIFGQKSGYLTGVCRTAVVGEATPEQYKIWSNLIECKYLVMDLIKPGAS
                     CAEIYRKFLEKFSQLGFAPISFVAHGIGLHLHEEPYMGRYGNEIVEAGMVGAFEPLVY
                     IPGRFGMQNKDMFCVTDKGCELLSDVTPTDSLLRVG"
     gene            1888..>2506
                     /locus_tag="VLM90_16345"
     CDS             1888..>2506
                     /locus_tag="VLM90_16345"
                     /inference="COORDINATES: protein motif:HMM:NF014766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HSQ14597.1"
                     /translation="MKITRIETIPIQLPTRRVHQWASLTTPIGVYVIIKLHTDEGLIG
                     LGEAPVLKDWGGDHGKYFGETPQTTAHIIGDILAPALAGQDPSRFEMIHALMDKAVKG
                     YPYCKAAIDAALYDVVGKALNIPAYQLLGGLYRERIPIAHSLGLMEIEKAVDEALQAK
                     AEGVKTIKLKGGVEHKRDVELVKQIRMAIGPDLNICVDANQGYPTA"
BASE COUNT          557 a          671 c          764 g          514 t
ORIGIN      
        1 cgcggtgatt taaaaccctt ggcgcagcgc aacgcgatga cgatcggcga tgacgatttc
       61 ccaggcgatg tcgctaagct gatcaaggcg ctcgaagcgc tgccgggact ggccaaacca
      121 actcgccaac cagccgatca atggaaagcc gacttgcgcc aacgattgcg gcgtcggctg
      181 gtctggaaga ttccattgat catattgctc gtcagcttcg ccgcctggtg gcagtggcgc
      241 aaagatgccg tgccgctgtc gagtaatgcg caacaaactg ccgccgccaa gatcgccgcg
      301 gcactgtccg gtacctggag aggggacgtg acttacccat ggggcgataa gtacagcgaa
      361 agattcctgt tcacggccga gggagcgaag ttgtttggca tcgcgacgtt tctcgcttcg
      421 aagcgggcca tcgaagacgg gcagatcgcc ggcgagacga ttctattcag agtcaggttt
      481 gaagaagtca gcggcggcga ctcgcgcacc cgtttgaacc gctacgaggg caagctcctg
      541 ggagacgaaa tccaactgcg agtcttcgac gacaagggta gcccgccggt ggaaatcaat
      601 ttaaccagaa gcgccgatga cggcacggct gtcgatgccg ccaagcgata atcttgagcg
      661 aatcccgcgc gctttggctt gaccctccgg taaccagtcg atattctcgc cgataacttt
      721 atggatcaag aaataatctc acggctaaaa caacgcgtca tcgccgaggg gctcgatgcc
      781 atcgttgcca tgtcgccgga aaacgtcacc tatgtttccg gtttggtcgt gccgtcgcag
      841 tcgctgatgc gctggcggca tgccgcttgt attgtcacgg cggacggtag gatttctatg
      901 atcgccatcg acatggaggc gacaacggta aaggctcacg ccggcatcga tgatttgcgc
      961 atctatcgcg agttcagcga cgatccgatg gataagctgg cggaggcttt gaaagattta
     1021 aagctcgatc atagcacggt cgccattgag ttggagttct tgccggcaaa ggatttcgcc
     1081 acgctgcaaa agagtttgcc ccgggtgcaa tggctggcgg cggatggagt cttcaacaag
     1141 gcgcggcaaa tcaagacgcc cggtgaactc gcgttgttgc gctcgctgag caagctcacg
     1201 gataacgcga ttggcacggc tttgcgctcc gctaagatcg gcatgagcga gatggagctg
     1261 gcgggcacgt tgctgacgac gctgttcgcc ggcggcgctg agagttataa gttaatgatc
     1321 atcgcttccg gcgagcgcag cgagttcccc aacgtcggac cgagcgagcg taagcttaaa
     1381 cctggcgaca tcattcgcat ggaaatcttc ggccagaaga gcggctacct caccggcgtt
     1441 tgccgcaccg cggtggttgg cgaggcgacg ccggagcagt acaagatctg gtctaatttg
     1501 atcgagtgca aatatctggt catggattta attaaacccg gggcgagctg cgcggaaatc
     1561 taccgaaagt ttcttgagaa gttcagccag ctgggcttcg cgccgatcag tttcgtcgcc
     1621 catggcatcg gcctgcacct tcatgaagag ccgtacatgg ggcgctatgg caatgagatt
     1681 gtcgaagccg gcatggtcgg cgctttcgaa cctttggttt atatcccggg ccgcttcggc
     1741 atgcagaaca aagacatgtt ttgcgtgacg gacaagggct gtgagctgct ttccgatgtg
     1801 acgccgaccg atagtttgtt gagagtggga taattcagcg ctcgcacctt tgtcggctcc
     1861 cagtaagcga gggtagttcg gagacaaatg aaaatcacca ggatcgaaac cattccaatc
     1921 cagttaccga cgcggcgcgt gcaccagtgg gcgagtctca ccacgcccat cggtgtttac
     1981 gttatcatta agcttcacac cgacgaaggc ctgatcggcc tgggcgaagc gccggtgttg
     2041 aaagattggg gcggcgatca tggcaagtat ttcggcgaga cgccgcagac gacggcgcat
     2101 atcatcggcg atattctcgc gccggcgttg gccggccaag atcccagccg tttcgaaatg
     2161 attcacgcgc tgatggataa ggcggtgaag ggttatcctt actgcaaagc cgccatcgac
     2221 gcggcactct atgatgtcgt cggcaaggcc ctcaatatcc cggcgtacca attgctcggc
     2281 ggtttgtatc gggagcggat tccgattgct cacagcctgg gtttgatgga gatcgaaaag
     2341 gcggtggacg aagcgctgca agcgaaggct gaaggcgtga aaaccatcaa gctcaagggc
     2401 ggtgtcgagc acaagcgcga tgtcgagctg gtcaagcaga ttcgcatggc catcggtccc
     2461 gacttgaata tctgcgtcga cgccaaccaa ggttatccga cggcca
//
LOCUS       DATIRS010001267         2300 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_292708, whole genome shotgun sequence.
ACCESSION   DATIRS010001267 DATIRS010000000
VERSION     DATIRS010001267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2300
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_292708"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1224
                     /locus_tag="VLM90_16350"
     CDS             <1..1224
                     /locus_tag="VLM90_16350"
                     /inference="COORDINATES: protein motif:HMM:NF025152.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4175 family protein"
                     /protein_id="HSQ14598.1"
                     /translation="MNAEQMQGLGMDEMFKGLDEIRKKLQAGDIEGARQLARELFNQM
                     AQMVAAMQNMQRSQMASSMGRMQGEMQRQTNELQEIAREQQEILVKTESLNSAGLTER
                     DAALKSKLEQFLARSIAELGKLTELFPDREGPDDPNLLTNLDDATMNALLRNLIAKLS
                     QKDFPGFNEGDGYIRKELAKKRTPVQEPKAQRADKSIGDIKNELDKLLNEPAQALSDA
                     DKRALRELAQREDVLKERTETLHEKLESLFQLFPQLDPKIVQGIGEAGKAMGSAQGRL
                     GQLDSRGAVPPERQALERLGQAQQQMQQSMQQMAQRGQMGNMPMTRLFRQGGPGRFLP
                     FGSLTPLPGMPQFPDFDFEQGFTGLDTEKFRLPGKEEYKAPRNFREEILDSLKQGVPR
                     QMKEQIERYFKNLSE"
     gene            1232..>2300
                     /locus_tag="VLM90_16355"
     CDS             1232..>2300
                     /locus_tag="VLM90_16355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HSQ14599.1"
                     /translation="MMYRIAPFLIFACLLAGQLYGAEAEREFKAGEEILEAWRLADAE
                     AIAAKALKENPKSATALEFDGRIKFYQGRYQEALTVLDRALAVDSKDPRRQAMKLLTQ
                     LTLDVHKSFKRHESAHFILFVDDKRDGILVPHALDALEKTYEAIGAELGYFPKEKVRV
                     EVAPDATSFNAISTLSLRDIEETGAVGICKFNKLMIISPRALSFGYRWVDSLSHEYLH
                     YAIVALSNNQAPIWLHEGMARFYETRWRKPAPVKEAHEDYLTPANQTLLVQALEKNQF
                     VGFKKMEPSLIHLDSPEQVQLAYAEAASAVDFINQSKGKVGVRELLATLKDKPTPEAV
                     EKVYGMAFDAFETKWKAFLKAK"
BASE COUNT          542 a          686 c          671 g          401 t
ORIGIN      
        1 atgaatgccg agcagatgca ggggctcggc atggacgaga tgttcaaggg cctcgacgag
       61 atccgcaaaa aacttcaggc cggcgacatc gagggcgcgc gccagttggc gcgcgagctg
      121 ttcaatcaaa tggcgcaaat ggtcgcggcg atgcagaaca tgcagcgctc gcagatggcc
      181 tcgagcatgg ggcgcatgca gggcgaaatg cagcgccaga ccaacgagct ccaagagatc
      241 gcccgcgagc agcaggagat tttggtcaag accgagagtc ttaatagcgc cggcctcacc
      301 gaacgcgacg ccgcgctaaa atcgaagctg gaacagttcc tggcgcgctc catcgccgag
      361 ttgggcaaac tcaccgagct gtttcccgac cgcgaggggc ccgacgatcc caacctgctt
      421 accaatctgg acgacgctac tatgaacgcg cttttgcgca acttgatcgc caagttgagc
      481 cagaaggatt tccccggctt caacgaaggc gacggctata tccgcaagga actggcgaaa
      541 aagcgcacgc cggtgcagga accgaaagcg caacgggcgg ataaaagcat tggcgacatc
      601 aaaaatgagc tggataaact gctcaacgaa ccggcgcaag ccttgagcga tgccgataaa
      661 cgcgcgttgc gcgaactggc ccaacgcgag gacgttttaa aggagcggac cgagacgctg
      721 catgaaaagc ttgaatcgct gttccagctg tttcctcaac tcgatcccaa gatcgtccag
      781 ggcatcggcg aagccggcaa ggcaatgggc agcgcccagg gccgtttagg ccaactcgac
      841 tcccgcggcg cggtgccgcc ggagcgccag gcattggaac ggttgggcca ggcacagcag
      901 cagatgcagc agtcgatgca gcaaatggcc cagcgggggc agatgggcaa tatgcccatg
      961 acccgcttgt tccgtcaggg tgggccgggc cgcttcttgc cgttcggcag cctgacgccg
     1021 ctaccgggca tgccgcaatt ccccgatttc gactttgaac agggcttcac cgggctcgac
     1081 acggaaaagt tccgcctgcc cggcaaagaa gaatacaaag caccgcgcaa cttccgcgaa
     1141 gagattctcg actctctcaa gcagggcgtg cctcggcaga tgaaagagca gatcgagcgc
     1201 tatttcaaaa atctttccga gtgatcgccg cttgatgtac cgaatcgcgc cgtttctcat
     1261 cttcgcctgt ttattggccg ggcagctcta cggcgccgaa gccgaacgtg aattcaaagc
     1321 cggcgaagag atccttgaag cctggcgcct cgccgacgcc gaagcgatcg ctgctaaggc
     1381 gctcaaggaa aatcccaagt cagcgaccgc cctggagttc gacggccgga ttaagtttta
     1441 ccaaggccgc taccaagaag cactgaccgt tctcgaccgc gccctggcgg ttgattcgaa
     1501 ggatccgcgg cgccaggcga tgaagctgct cacccagctg actctcgacg ttcataagtc
     1561 gttcaaacgt cacgagagcg cccatttcat tctcttcgtc gacgacaagc gtgacggcat
     1621 cctggtgccc cacgccttgg acgccctgga aaaaacctac gaagcgatcg gcgccgaact
     1681 gggctacttt cccaaggaaa aggtccgcgt cgaggtcgcc ccggacgcga ctagttttaa
     1741 cgccatctcg acgctgtcct tgcgcgacat cgaagagacc ggcgccgtcg gcatctgcaa
     1801 gttcaataaa ttgatgatca tctcgccgcg ggcgctgagc ttcggttacc gctgggtcga
     1861 ttccctgagc catgagtatc ttcactacgc gatcgtcgcc ttgtcgaaca accaagcgcc
     1921 gatctggctg cacgagggca tggcgcgttt ttacgaaacc cgctggcgca agccggcgcc
     1981 ggtcaaagag gcgcatgaag actatctcac accagccaat cagaccttgc tggtgcaggc
     2041 gctggagaaa aatcaattcg tcggtttcaa gaaaatggaa ccgtcgctca tccacctgga
     2101 tagtcccgag caagtgcagc tggcttatgc cgaggcggcc tctgccgtag atttcatcaa
     2161 ccagagcaag ggcaaggtcg gcgtgcgcga actgctcgct accctcaaag ataaaccgac
     2221 gcccgaggcg gtggaaaaag tctacggcat ggctttcgac gcctttgaaa ccaagtggaa
     2281 ggcatttctc aaagccaagg
//
LOCUS       DATIRS010001268         1902 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_193400, whole genome shotgun sequence.
ACCESSION   DATIRS010001268 DATIRS010000000
VERSION     DATIRS010001268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1902)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1902)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1902
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193400"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(41..565)
                     /locus_tag="VLM90_16360"
     CDS             complement(41..565)
                     /locus_tag="VLM90_16360"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HSQ14600.1"
                     /translation="MKKSRREQALTHGKLRAFALLTASLVLAPTLQANGVWAQHVHPA
                     PPSSAPAVGAAAVAFDLKTLDGKAAGLTTFRGKPLVINFFASWCDPCRDEMPLINDLA
                     TKAAGNYQVLGIAVEDTRAAVTEYAKEFKLAFPIALDLNSTVKRAYRIFGPPATFFID
                     SQGIIRDVVMGPIT"
     gene            complement(562..>1902)
                     /locus_tag="VLM90_16365"
     CDS             complement(562..>1902)
                     /locus_tag="VLM90_16365"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sialidase family protein"
                     /protein_id="HSQ14601.1"
                     /translation="EFAGGGMKLRFTHSCFALYFVLAFGCSADLPAPSLTQGARALNF
                     GAERRLGNDEKNPSTPFLRYSPDGRLFAVWTEDHDTPWPQGSHTGHQRMGGDRAPSPM
                     RNAMIAWSKDGGQSWSAPKRLNNTVEAVQGEENGPKVAFTPDNNAFVVWSIPGVKGDK
                     TRANIRFAMDDGNGGFTAARTLNEVQDAGRFPIIETMPDGNLLIAWIDRRIDGPKPRQ
                     LYLMKIDSRGQALTKNYQVGEGLCECCKLGINFADGGKTVYMVDREVDANKIRNHVLR
                     KSLDGGATFGAPVEISNDGWQVPSCPHSGPSIGRDRRGHLHVSWFTQGRSEPEAGIYY
                     SVSTDGGKSFAPRTLIHRNTAPETLYNNLVVGDDDTIYFAWSNLDTNSRSQIYMRTLI
                     ANGRTWSPIQQISNSKGNASRATLALKNNQLYVAWTETNGEDSRVVVRSATVGQ"
BASE COUNT          361 a          533 c          568 g          440 t
ORIGIN      
        1 gttgaatgcc aaccttcttg acagcctcct tgacgcgctc ctacgtgatc ggccccatga
       61 cgacatcgcg gatgatgcct tggctgtcaa taaaaaatgt cgccggcggg ccgaagatgc
      121 gataggcccg tttcacggtg ctgttcagat cgagggcgat gggaaaggcc agcttaaact
      181 ctttggcgta ttcggtgacc gcggcgcggg tatcttcgac ggcgatgccg agcacttgat
      241 aatttccagc cgcttttgtg gcgagatcgt tgatcagcgg catttcgtcg cggcagggat
      301 cgcaccagct ggcaaagaag tttattacca gcggctttcc gcgaaaggtc gttaaccccg
      361 cggcctttcc atcaagagtt ttcaaatcga acgcgacggc ggcggcgcca actgccggcg
      421 ctgagctcgg cggtgccgga tggacatgct gtgcccaaac gccatttgcc tgtaaggtgg
      481 gtgctaaaac aaggctcgcg gtcagtaggg cgaacgcgcg tagctttccg tgagtcagtg
      541 cttgctcgcg tcgtgacttc ttcattgtcc cactgtcgca cttcgaacga ccactcttga
      601 gtcttcgccg ttggtttccg tccaagcgac atacaattga ttattcttaa gcgccagtgt
      661 cgcgcggctg gcgttgcctt tgctgttgct gatttgctgg atcggactcc aggtccggcc
      721 gttggcaatg agcgtacgca tgtagatttg cgatcggcta ttggtgtcga gattactcca
      781 ggcgaaatag atcgtgtcgt catcgccaac cacgagatta ttatagagtg tttccggcgc
      841 ggtgttgcgg tggatcaggg tgcgcggcgc gaagcttttg ccgccatctg tcgacacgct
      901 gtagtaaatg ccagcctctg gttcagagcg gccctgggtg aaccagctga cgtgcagatg
      961 gccgcgccgg tctctaccga tgcttgggcc ggagtgcggg caagagggga cttgccagcc
     1021 gtcgttgctg atttccaccg gcgcgccaaa ggtagcgccg ccgtcaagcg acttgcgcaa
     1081 cacatggttg cgaatcttgt tggcgtcgac ttcgcgatcg accatataaa ccgtcttgcc
     1141 accatcggca aagttgatgc ccaacttgca acactcgcac aggccttcgc caacttgata
     1201 attcttcgtc agcgcttggc cgcgggaatc gatcttcatt agatacaact ggcgcggttt
     1261 cggaccgtcg atgcggcggt cgatccaggc gatcaataga ttgccatcgg gcatggtttc
     1321 gatgatcggg aagcggccgg cgtcttgcac ttcgttcaac gtgcgcgccg ctgtgaagcc
     1381 gccattgccg tcgtccattg caaagcgaat gttggcgcgg gttttgtcgc cttttactcc
     1441 cgggatcgac cagacgacga aagcgttatt gtccggcgtg aaggcgactt tcggcccgtt
     1501 ttcttcgccc tggacggctt cgacagtatt gttcaagcgt ttcggcgccg accacgattg
     1561 gccgccgtcc ttcgaccaag cgatcatcgc gttgcgcatc ggcgaagggg cgcggtcgcc
     1621 acccatccgt tggtggccag tatggctgcc ctgcggccat ggcgtgtcgt ggtcctcggt
     1681 ccagactgcg aacagccgac catcggggct gtagcgtaaa aatggcgtgg agggattttt
     1741 ttcgtcgttg ccgagacggc gctcggcgcc gaagtttagc gctctggcgc cctgtgttag
     1801 agagggcgct ggcaaatccg cactacagcc aaaagccaat acaaaataca acgcgaagca
     1861 tgaatgtgtg aaccgaagtt tcataccacc acctgcaaat tc
//
LOCUS       DATIRS010001269         4021 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1473191, whole genome shotgun sequence.
ACCESSION   DATIRS010001269 DATIRS010000000
VERSION     DATIRS010001269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4021
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1473191"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            548..823
                     /locus_tag="VLM90_16370"
     CDS             548..823
                     /locus_tag="VLM90_16370"
                     /inference="COORDINATES: protein motif:HMM:NF016167.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF433 domain-containing protein"
                     /protein_id="HSQ14602.1"
                     /translation="MTDKQLISRVRVDPRICSGRPYIYGTRIHIAIILDALSEGLAPE
                     EVLEHYPDLETDDLRAAVAYACKLAEENGGLAVLHPQRSIKECCQLR"
     gene            complement(1293..2075)
                     /locus_tag="VLM90_16375"
     CDS             complement(1293..2075)
                     /locus_tag="VLM90_16375"
                     /inference="COORDINATES: protein motif:HMM:TIGR00730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HSQ14603.1"
                     /translation="MSNENDKIIAIDGWGVTPGSPEVVRFLEGPQRRLTEVARAARIF
                     CEFIRGFRALHFAGPCVTVFGSARFTEVNPYYRMARQVGAGLATAGFTVMTGGGPGIM
                     EAANRGAKDVGGRSIGCNIVLPQEQEHNPYLDHWVTFRYFFVRKVMLVKYSYAFIALP
                     GGFGTMDEIFETATLIQNAKIREFPLVLMGKEFWAPLLEFMSERLVKARTIDAIDLER
                     ITVTDSADEAVSVITEVAKRRFGLTYGAQMKRHWIFGERGPV"
     gene            complement(2148..3680)
                     /gene="guaA"
                     /locus_tag="VLM90_16380"
     CDS             complement(2148..3680)
                     /gene="guaA"
                     /locus_tag="VLM90_16380"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: protein motif:HMM:NF000848.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HSQ14604.1"
                     /translation="MIVVLDFGSQYTQLIARRIRESKVYCEIHPFNVALDKITALDPK
                     GIILSGGPASVYQDDAPKVSAERFALPVPLLGICYGMGVINLHFGGAAARADRREYGP
                     AQLVIDNDSDLFHGFSKRETTQVWMSHGDKMTSFPKGWDILAHSDNSPIASFADPTRR
                     FFGLQFHPEVAHTARGRQLLDNFVFRICADQPDWTMEHFIESSVRKIRQQVGDGRVLC
                     ALSGGVDSSVAATLVHRAIGERLICVFVNNGLLRKNEAEHVCSLFAERFGASFRYADA
                     TEPFLSELKGVEDPEVKRKRIGYKFIQIFEEEARKLGEMEFLAQGTLYPDVIESVSVL
                     GPSATIKSHHNVGGLPIDMKFKLIEPLRELFKDEVRVLGKELGLPIEMIQRQPFPGPG
                     LAIRVLGEVTEARLKVLRDADVIVLDEIKAAGLYDKVWQSFAVLLPVKTVGVVGDERS
                     YENVVALRVVDSQDGMTANWVALPFDLLGRISNRILNEVRGVNRVVYDISSKPPATIE
                     WE"
     gene            complement(3677..3982)
                     /locus_tag="VLM90_16385"
     CDS             complement(3677..3982)
                     /locus_tag="VLM90_16385"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: protein motif:HMM:NF012690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HSQ14605.1"
                     /translation="MHHIGAMGQGSRDRYGQADVMDSNKLVPEGIEGRVPYKGSLSSN
                     ILQLVGGLRAGMGYLGCNEIGALHSKAKFMQITSAALREGHVHDVFITKEAPNYRIE"
BASE COUNT          899 a         1231 c         1080 g          811 t
ORIGIN      
        1 cgtcggccac caaaattctt ccgtccagtc acctttaagc cagcttgggc ctgatagtcc
       61 tcggcataga ttctcacatg atccgcttga ccaaaggctg gttctcgact ggttatcgtc
      121 gttcttgaaa agtcctcata ggtgttcttc aacgttagtg atatggggac ctgcaggatc
      181 gcccatcctc ccggattcaa aatacgatac aactcggaca tcgccttgcg gcgttgttaa
      241 ttaggagatc gctgcggcca atggcgatag atgggatatt cgggtctgtt attgcatcac
      301 catcgttacc cgtcgaaaga ttcatccatg gcccgacggt aacccatcaa acctcccggc
      361 gcactctatc gcatgacatg ccgcaacgac cgccaacagg cgattttttg acgacgatcg
      421 ggatcgcacg cctctcttga aaatagatct catttcgcct gaatgtttgg gacttgccca
      481 aaactatcca agcgttgtat gattatgaca ttcgaaccat ccacgactag aacttgtgcg
      541 ttaaattatg accgataaac aattgatctc ccgggtgcga gtcgatccga gaatctgctc
      601 gggccgtccc tatatttacg gcaccagaat acatatcgcg atcattctcg acgcgctcag
      661 cgaaggcctt gctccggaag aagtcctcga acactacccc gatcttgaga cggacgatct
      721 gcgcgccgcg gtcgcctacg cctgcaagct cgctgaggag aatggcgggt tggcggtgct
      781 tcacccgcaa cgcagcatca aagagtgctg tcagctaaga tgacatgaat cgcgctgggt
      841 tctagccaaa ccgtcaccgt ggactcccta acgcaggtcg cagaactgac cgcgcggccg
      901 ttctcccgag ccgacaagct caaacccagg gcaatcgata accatgcggt gatgttcgcg
      961 ggcgctgaag gtctcccgga tctttccgtc aaaaaataag tgggctcccc tcacctggcc
     1021 cgaacgacgc gacacgcaca gcgttggcgc ggatacagag atttacccgc gatcccacaa
     1081 gaaaattctc cgataccagt atagctagag caccgatcgc aactctggtg gattttccat
     1141 ccgacgctcc gacgattcgg gcgaggcaat tttccaagcc gactattgcg gcgaccagat
     1201 cgtttgaaac tactatcaca caaactcacg cgcttccgcc ggcggcgtgc ggctgtctga
     1261 gccggtagat tatcgtccgt gtcatgtgcg ccctacaccg gcccgcgctc gccaaagatc
     1321 cagtgccgct tcatctgcgc gccataggtc aaaccgaagc ggcgcttggc cacctcggtg
     1381 atcacactga ccgcctcgtc ggcggagtca gtgacggtga tccgttcaag atcgatagcg
     1441 tcgatggtcc gcgccttgac caaccgctcg gacatgaatt cgagcaacgg cgcccaaaac
     1501 tccttgccca tcagaaccaa cggaaactca cgaatcttcg cgttctgaat caaggtcgcg
     1561 gtctcaaaaa tttcatccat ggtgccaaag ccgccgggca aggcgatgaa cgcataggag
     1621 tatttcacca gcatgacttt gcgcacgaag aaataacgga aggtaaccca gtggtcgaga
     1681 taaggattat gctcctgctc ctgaggcaga acgatattgc aaccgatcga gcggccgcca
     1741 acatctttgg cgccgcgatt ggccgcttcc atgatccccg ggccgccgcc ggtcatcacc
     1801 gtgaaacccg cggtggccaa cccggcgcct acctgacgcg ccatgcgata gtaaggattg
     1861 acttcggtaa agcgcgccga gccgaacacg gtgacgcagg ggccggcaaa atggagcgcg
     1921 cgaaagccac ggataaattc gcaaaagatc cgcgccgccc gcgccacctc ggttaagcgg
     1981 cgctgcggcc cctcgagaaa gcgcacaacc tccggcgatc cgggggttac gccccaacca
     2041 tcgatcgcga tgatcttatc gttctcattc gacatcgctt cacaactcct gcgctagcta
     2101 gactttttga cggccgattc gccaacggca agaaaccgtc gagcaaccta ctcccactcg
     2161 atggtcgctg gcggcttgga ggaaatatcg tagaccacgc ggttgacgcc gcgcacttcg
     2221 ttgaggatgc ggttggagat ccggccaagt aaatcgaacg gcagcgccac ccagttagcg
     2281 gtcatgccat cctggctatc gaccacgcgc agcgccacga cgttctcgta gctgcgctcg
     2341 tcgccgacca cgccgacggt tttcaccggc agcagcaccg cgaacgactg ccagaccttg
     2401 tcgtacagcc ccgccgcttt gatctcgtca aggacgatga catcggcgtc gcgaagaacc
     2461 ttcaagcgcg cctcggtcac ctcgccgagc acgcgaatcg ccagccccgg cccagggaac
     2521 ggctgccgct ggatcatctc aatcggcagg ccgagctcct taccgagcac gcgcacttcg
     2581 tctttgaaca gttcgcgcaa cggctcgatc agtttgaact tcatgtcaat cggcaggccg
     2641 ccgacattat ggtgcgactt gatggtcgcc gaggggccca acaccgacac cgattcgatg
     2701 acatcgggat agagcgtgcc ctgggccaaa aactccatct cgcccagctt acgcgcttct
     2761 tcctcgaaaa tttggataaa tttgtaaccg atccgcttgc gtttcacttc agggtcttcg
     2821 acccctttca gttccgagag aaacggctcg gtggcgtcgg catagcgaaa gctcgcgccg
     2881 aatcgttcag caaataaact gcacacatgc tcggcttcgt tcttacgcaa gagcccattg
     2941 ttgacgaaca cgcagatcag ccgttcgccg atcgcgcgat gcaccaaggt cgccgccacc
     3001 gaggagtcga cgccgccgct cagcgcgcaa agcacccggc catcgcccac ttgctggcga
     3061 attttccgca ccgagctttc aatgaaatgc tccatggtcc aatcgggctg gtcagcgcag
     3121 atgcgaaaaa cgaaattatc gagcagttgg cggccgcgcg cggtatgggc gacctcggga
     3181 tggaactgca aaccgaaaaa gcgccgcgtc ggatcggcga aggaagcgat cggcgagttg
     3241 tcgctatggg ccaagatgtc ccaacccttg gggaagctcg tcatcttgtc gccatgactc
     3301 atccacacct gagtggtctc gcgcttggaa aaaccgtgga acaaatcgct gtcgttgtcg
     3361 atgacgagtt gcgccggtcc gtactcgcgc cgatcagcgc gcgccgcggc accgccgaag
     3421 tggaggttga taacacccat gccataacag atgccgagta acggcaccgg cagcgcgaac
     3481 cgctcggcgg aaacttttgg cgcgtcgtct tgatagacgc tcgccggccc gccggagagg
     3541 atgattcctt tcgggtcgag cgcggttatt ttgtcaagcg cgacgttgaa tggatggatc
     3601 tcgcagtaga ccttggactc gcggatacgg cgggcgatca gttgggtgta ctgcgaaccg
     3661 aaatcgagga cgacaatcat tctattcgat aatttggcgc ttccttggtg ataaacacat
     3721 catgcacatg accttcgcgt agcgccgccg aagtgatctg catgaatttc gctttgctat
     3781 ggagcgcgcc gatctcattg cagccgagat agcccatgcc ggcgcgcaag ccgcccacca
     3841 gttgtaaaat attcgacgac aaagagccct tgtaaggcac ccggccttcg atgccttccg
     3901 gcactaattt gttggaatcc atcacatcgg cctggccata acggtcgcgg ctgccctgcc
     3961 ccatggcgcc gatgtgatgg attccaacaa attagtgccg gaaggctttg taggtgcgtc
     4021 c
//
LOCUS       DATIRS010001270         3753 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1866321, whole genome shotgun sequence.
ACCESSION   DATIRS010001270 DATIRS010000000
VERSION     DATIRS010001270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3753
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1866321"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..809)
                     /locus_tag="VLM90_16390"
     CDS             complement(<1..809)
                     /locus_tag="VLM90_16390"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HSQ14606.1"
                     /translation="MTDLSVTANTEHANRLEWRLYLKILTTRVFEEALVRWEQEKKHS
                     AQTFPSRGQEAIAIGTCLALEKGDDVLPSFRTRGAMIGMGIGIEEQLREFLHTPSAIG
                     DSRDAPHHASWPERGVMPGSTMIGGHLAMAAGVALANQTDGASNVSVAFFGDGTLGSG
                     DLHETMHIAGAWHLPLILVCENNGWEMATPWPKVRRQRSLIPYAEPFGLASRQVDGND
                     AMDVYQAARWARATALGGQPVFLDCLTFRVGLYSSHFGEVRSGIENDLAEAA"
     gene            complement(920..2014)
                     /locus_tag="VLM90_16395"
     CDS             complement(920..2014)
                     /locus_tag="VLM90_16395"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HSQ14607.1"
                     /translation="MISVIDLQKSFAGARGEVRALRGVSFEVGKGELFTLLGPSGCGK
                     TTTLRCIAGLEQPLSGEILIDGQAVFSAAAGTFIPPERRNIGMVFQSYAIWPHMTVFQ
                     NVAYPLAKESNRIEIGERVGRILDRLSLGTLADRLAPNLSGGQQQRVALARALVAQPQ
                     VLLLDEPLSNLDAKLREQMRFELKSLQESFGITTVYVTHDQEEALALSDRIGLMHEGM
                     LLEVGAPTELYLRPAHRITADFLGTANFIAGNVELPGNGAWDEMLLDTAVGRFAARRS
                     VEWQPGMAAELFFRPESIELLDANGIDGLPNHGSARVERVTFLGNSADVILRSGAARL
                     RLRAHPARIPSVGTTVNFSVAAESCIVFPA"
     gene            complement(2168..>3753)
                     /locus_tag="VLM90_16400"
     CDS             complement(2168..>3753)
                     /locus_tag="VLM90_16400"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HSQ14608.1"
                     /translation="ATGMTLANYTTVLTSPSTLPIFLNTFLFTSGSLAVGLPLAVLMA
                     WLLERTAIPARRWIAALILVPMTIPSLLSAIAWIQLLDPRIGIINVVLRSVLGLSGDF
                     GPFDIYTLYGMCFVQGLRLVPSAYLMIAASFRAMDPSLEEQSAMAGRGVTQTTLRITL
                     PIMRPALLAMLIYYIIVVIESFDIPGLLGFTARIRVLSTAIYWATHSEVGLPDYGLAS
                     ALGALVLFVALLLMWAYQRLMAHQERFATITGKGYRPRRVSLGAWTAPASALCLLYVA
                     LAVVLPFLMLIWTSIQPFYAVPSADSLARVSFDGYVKIWQESTVMRALWNTLVLALVT
                     SAATILLAVMISWFVVRRSRAADGLSHYLATVSFLPQCVPSIVIGLAFIFVYVRFPIP
                     IYGTLWIIALAMTTRYLAYSSRTMTSALMQVHGELEEASQMSRAPWARTLRRITLPLL
                     APAMINVFFWVAVHAMQELSMALMLYNPDTVVVSTMILEHVAKRPHHGCRSLGGDLDF
                     TFRHLAARRPAICATPARP"
BASE COUNT          858 a         1196 c         1051 g          648 t
ORIGIN      
        1 gccgcctcgg ctaagtcgtt ttcaatgccc gaccgcacct ctccgaagtg cgagctatac
       61 aggccgacgc gaaaggtcag gcaatcgaga aacaccggtt gcccaccgag cgccgtcgcc
      121 cgcgcccagc gcgccgcctg ataaacatcc atggcatcgt tgccgtcgac ttggcgcgac
      181 gccagaccga atggctcggc gtaaggaatc agcgagcgct gccggcgcac cttgggccag
      241 ggcgtcgcca tctcccaacc gttgttctcg cacaccagaa tcagcggtag atgccacgcg
      301 ccggcgatat gcatggtctc gtgcaggtcg ccggaaccca aggtcccgtc gccgaagaac
      361 gccacgctga cattgctggc gccatcggtt tgattggcca gcgccacccc cgccgccatg
      421 gccagatggc cgccgatcat cgtcgatccc ggcatcacac cgcgctctgg ccatgacgca
      481 tgatgcggcg catcgcgtga atccccaatg gccgaaggcg tgtgcaaaaa ctcgcgaagc
      541 tgttcttcga tgccgatgcc catgccgatc attgcgccac gggtacgaaa cgacggcagc
      601 acatcgtcgc ccttctccag cgccaggcaa gtgccgatgg cgatcgcttc ctgcccccta
      661 ctgggaaagg tttgcgccga gtgcttcttc tcctgctccc agcgcaccag cgcttcttcg
      721 aagacccgcg tggtcagtat ttttagatag agtcgccact cgagacggtt ggcgtgctcg
      781 gtgtttgccg taacagataa atcagtcatc ttgaactccc cattgagttg cttactcctc
      841 tccctctgga agaggacaga ggtgagggca agggcgaccg ccggtcgccc ttacaataat
      901 tccgaaatac atgagtacct catgccggaa agacgatgca cgactccgcg gccactgaaa
      961 aattcaccgt tgtgccgacg cttgggatcc tcgctggatg ggcgcgcaga cgcaaccgcg
     1021 ctgcaccgct gcgcaaaatc acatccgctg agttgccgag aaaagtcacc cgctcgaccc
     1081 gggccgaacc gtgattaggc aagccgtcaa ttccattggc atccaacagc tcgatacttt
     1141 ccggacggaa aaacagctcc gccgccatgc ccggctgcca ttcaacactg cgccgggcgg
     1201 cgaatctgcc gaccgcggta tccaataaca tttcatccca agcgccattt cccggcagct
     1261 cgacgttgcc agcgataaaa ttcgccgtgc cgagaaaatc ggcggtgatt cgatgtgccg
     1321 gtcgaagata caactccgta ggcgcgccca cttccaggag catgccctca tgcatcaaac
     1381 cgatgcgatc cgacaacgcc agcgcttcct cctggtcatg ggtaacgtaa acagtcgtga
     1441 tgccaaaaga ttcctgcagc gacttcaact cgaaacgcat ctgctcgcgc agcttggcgt
     1501 cgagattgct cagcggctcg tcgagcagca gcacctgggg ttgcgccacc aacgcgcgcg
     1561 ccaacgccac gcgctgctgt tgcccgccgc tcaagtttgg cgcaagccga tccgccagag
     1621 tgccgagact caatcggtca agaatccgcc cgacgcgctc gccgatctca atccgattcg
     1681 actccttggc cagcggatag gcgacatttt gaaataccgt catatgcggc cagatcgcgt
     1741 aggattgaaa aaccatgccg atgttgcgtc gctccggtgg aataaatgtg ccggcggcgg
     1801 cgctgaaaac cgcctgaccg tcgattaaaa tttctccgga caacggctgc tctaatccgg
     1861 cgatgcagcg aagcgtcgtc gtcttgccgc agccgctcgg tccgagcagc gtaaacaact
     1921 cacccttgcc aacttcgaag gatactccgc gcaacgcgcg gacttcgccc ctcgcgccgg
     1981 caaacgactt ttgcagatct attacgctaa tcacgattga tcctgatcgc agacagacga
     2041 tcgtcgccgt acaacgtggt cttgatcgcc gcattgaacg gagccgcgaa cgcggccagg
     2101 accacgcttc gccagtgaga tagtttcggg cgctgtgaaa tcaaaatacc gcgcaacttt
     2161 ctaggagtca gggccgcgcc ggagttgcgc aaatagctgg ccgccgagca gcaagatggc
     2221 ggaaagtaaa atcaagatca cccccaagac tgcggcatcc gtggtgcggc cgttttgcca
     2281 catgctccaa aatcatcgtc gagacgacca ccgtatccgg attgtacagc atcagagcca
     2341 tcgataactc ctgcatcgcg tgcaccgcca cccagaaaaa cacattgatc atagccggcg
     2401 ccaagagcgg cagggtgatc ctgcgcagcg tgcgcgccca cggcgcccgg ctcatttgcg
     2461 acgcttcttc caattcccca tgcacctgca tcagcgccga ggtcatcgtg cgtgagctgt
     2521 atgcaaggta gcgggtcgtc atcgccagcg cgatgatcca tagcgtgccg taaatcggaa
     2581 tgggaaagcg cacgtagacg aagataaatg ccaggccgat gacgatgctc ggcacgcact
     2641 gcggcaaaaa cgataccgtg gcgagataat gcgacagtcc gtccgccgct cggctgcgcc
     2701 ggacgacaaa ccagctgatc attacggcga gcaagatcgt cgccgcggac gtcaccagcg
     2761 cgagcaccag agtattccac agcgcgcgca tgaccgtgct ttcctgccaa attttgacgt
     2821 agccatcgaa ggagacacgc gccagcgaat ccgccgacgg caccgcatag aaaggttgga
     2881 tgctggtcca gatcagcatc aaaaagggca gcaccacggc gagcgccacg tagagcaggc
     2941 aaagcgcgct tgccggggcc gtccaggcac cgagactgac tcgccgcggc cggtatcctt
     3001 tgccggtgat cgtagcgaat ctttcctggt gcgccatcaa acgctgatac gcccacatga
     3061 gcaacagcgc gacaaacaac accagcgctc ccaaggccga agccagtccg taatccggca
     3121 agccgacttc cgagtgggtc gcccagtaga tcgccgtgct gagcacgcga atgcgcgcgg
     3181 tgaaaccgag caaccctggg atgtcgaagg attcgatgac gacgataatg taatagatca
     3241 acatggcgag cagcgccggc cgcatgatcg gtagggtgat gcgcaaggtc gtttgcgtga
     3301 caccgcgccc tgccatggcg ctctgttctt ccagcgatgg gtccatcgcg cgaaacgaag
     3361 ccgcgatcat cagataagcc gacggcacca accgcaagcc ttgaacaaag cacatgccgt
     3421 atagcgtata aatatcgaac gggccgaagt cccccgacaa accgagaacg ctgcgcaaga
     3481 ccacattgat gatgccgatc cttggatcga gcagctgaat ccaggcgatc gccgagagca
     3541 gcgaaggaat cgtcatcggc acaagaatga gcgcggcgat ccaccggcgc gccgggatcg
     3601 cggtccgttc caaaagccac gccatcagga ccgccagcgg taagccaact gccagcgacc
     3661 cggaggtgaa gagaaacgta ttcagaaaga tcggcaaagt cgaaggactg gtgagaactg
     3721 tggtgtaatt cgccagcgtc atacccgtcg cct
//
LOCUS       DATIRS010001271         2018 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_391657, whole genome shotgun sequence.
ACCESSION   DATIRS010001271 DATIRS010000000
VERSION     DATIRS010001271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2018
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_391657"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..645
                     /locus_tag="VLM90_16405"
     CDS             <1..645
                     /locus_tag="VLM90_16405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14609.1"
                     /translation="LSKSVNLLAFVALGLTILLIVRSSLEGQVRVFALQSFVLALLSV
                     LIAGYSGSLELFGVGVALVVIKGIMIPRVLNRAVANIGLARVVAPYLGTAPALIICGI
                     LTIISFYVMTPIAASNPLPTADAIPLAFAGILIGFFIMVNRRRAVTQILGFLMLENGI
                     FLLALLATYGVPFIVEMGVFLDVLVAVLIMEVFVYRIKDNFDSIDVGQLEDLKE"
     gene            645..>2018
                     /locus_tag="VLM90_16410"
     CDS             645..>2018
                     /locus_tag="VLM90_16410"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit F"
                     /protein_id="HSQ14610.1"
                     /translation="MLVSLLLIPLAAAGLIALTRRRALMELLHTLAALATLATGAAIV
                     AQVWNGAVLTAAGDLFRVDALSAFMVALITFLGAVASLYAVGYIRAEFDGEHLARARL
                     FFALFQLFVFTMLLAVTTDNLGVMWVAIEGTTLATVFLVNLHQTRTSLEAAYKYLILS
                     SVGIALAFIGTALVYYAGAAKAGEIAVNWSALRAAAGSLNPEVVRLAFVFIVIGYGTK
                     AGLAPMHTWLPDAHSEAPAPISALMSGVLLNVGLYAMIRFKAVVDVAVGPEFAARLLI
                     GIGLFSLLVAAFVLVRQRNYKRMLAYSSVEHIGIICLGLGFGGYWGIFGALFHVVNHA
                     LSKSLLFILSGNILLKYHSAEIREVRGLLHAAPWTGTLFLAGTLALIGLPPFAPFISE
                     FLIFRAGLESHPWAAGTGVILLVIVFAGMLASVNGMLYGEPPADLPRGDALRLWLAPL
                     AANFALLL"
BASE COUNT          312 a          575 c          605 g          526 t
ORIGIN      
        1 ctgtccaagt ccgtcaatct gctggcgttt gtcgcgctcg gcttgaccat tttgctgatt
       61 gtccgaagca gtttggaagg acaggtgcgc gtgttcgcat tgcaatcctt tgtgctcgcc
      121 ttgctctctg tgctgattgc aggttacagc ggcagtctcg aattgttcgg agtcggcgtc
      181 gcgctcgtcg tcatcaaagg catcatgatt cctcgcgtgc tcaatcgcgc cgtggcgaac
      241 atcggcctgg cgcgggttgt ggcgccgtat ctaggcaccg cgccggcact cattatctgc
      301 gggatactca caatcatatc gttttacgtc atgactccca tcgccgcatc gaatcctttg
      361 cccacggcag atgcgatccc gctcgcgttc gccggcatcc tgattggttt ctttatcatg
      421 gtaaatcgcc gccgggcggt gacgcagatt cttggatttc tcatgttgga aaacggcatt
      481 ttcttactcg ctctcttggc gacgtacggc gtgcccttca tcgtcgaaat gggggttttt
      541 ctcgacgtgc tggtcgccgt gctgatcatg gaagtctttg tctatcgcat caaggataat
      601 ttcgactcga ttgacgtcgg tcaactggaa gatttgaaag aatgatgctg gttagtttgc
      661 tgttgatacc gctcgcggcg gccggactga tcgcgctcac ccgccggcgc gcgctgatgg
      721 aactgttgca taccctggcg gccctggcga cgttggccac gggagcggcg atcgtcgccc
      781 aggtgtggaa cggtgcagtg ctcaccgcgg ccggtgatct atttcgcgtc gacgcgttgt
      841 ccgctttcat ggtcgccctc attacttttc tcggcgcggt cgcttcgctt tacgcggtcg
      901 gctacatccg cgccgaattc gacggcgagc atttggctcg cgcccggttg tttttcgcgc
      961 tcttccaact ctttgttttc accatgctct tggcggtgac gacggataat ctcggcgtga
     1021 tgtgggtcgc cattgaagga acgaccctgg cgacggtctt tctggtcaat ttgcaccaga
     1081 cccgtacgtc actcgaagcc gcttacaagt atttgatttt gtcatccgtg ggcatcgcgc
     1141 ttgcgtttat cggcaccgcg ctggtgtact acgccggggc cgcaaaggcc ggtgaaatcg
     1201 ccgtcaattg gagcgcgctg cgcgccgccg cggggtcact caatcctgaa gtggtacggc
     1261 tggcgttcgt gttcatcgtc atcggctatg gaacaaaggc ggggctcgcg ccgatgcata
     1321 catggctacc ggacgcgcac agcgaagcgc ccgcgccgat cagcgcgctg atgtcgggag
     1381 tactgctcaa cgtcggcttg tatgcaatga tacgattcaa ggcggtcgtc gatgtggcag
     1441 tcgggccgga atttgccgcg cgtctgttga ttggcatagg gttgttctca cttctggttg
     1501 cggcgtttgt cctggtcaga cagcgcaatt ataagcggat gctggcctat tcgagcgtcg
     1561 aacacatcgg catcatttgc ctcggtttgg gcttcggcgg gtattgggga atcttcggcg
     1621 cgcttttcca tgtggtcaat catgcgctgt cgaaatcgct gctcttcatt ctttcgggca
     1681 atattctact caaatatcac agcgcggaaa tccgcgaggt gcgcggattg ttgcatgccg
     1741 cgccgtggac cggcacgctt tttcttgccg gcacgcttgc gctgatcggc ttgccgccgt
     1801 tcgcgccgtt catcagtgag ttcctcattt ttcgcgccgg ccttgagagc catccgtggg
     1861 cggcgggaac aggcgtgatc cttctcgtca tcgttttcgc gggaatgttg gcgagcgtga
     1921 atggaatgtt atacggcgag ccgccggccg atctcccgcg cggcgatgcg ctgcggctgt
     1981 ggctcgcgcc cctcgccgcg aatttcgcgc tcttgctc
//
LOCUS       DATIRS010001272         2687 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1080465, whole genome shotgun sequence.
ACCESSION   DATIRS010001272 DATIRS010000000
VERSION     DATIRS010001272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2687
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1080465"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2281
                     /gene="mutS"
                     /locus_tag="VLM90_16415"
     CDS             <1..2281
                     /gene="mutS"
                     /locus_tag="VLM90_16415"
                     /inference="COORDINATES: protein motif:HMM:TIGR01070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HSQ14611.1"
                     /translation="KGVVKREVVRVITPGTVTADEALDGRGNNFLAAVCQGEASYGLA
                     VSDITTGEFRCTEITDEPACFDELGRVQPSEILLAARDSRLRERIYKEYPAIHLTSVG
                     DVTFTDCTGVGPNHAADLPVEGARAAAAIVNYLSANIPESVKLLSDLHAYVVSNFLIL
                     DETTRVNLELIATARGERRGSLLAILDRTQTSIGARRLRQWLLYPLLDEAAIGARYDA
                     VQELADGFASREELKLRLAKIHDLERLSGRVLAGSATPKDLVAIKQTLGAASGVRELT
                     ASFTAPLLVNLSASLTELPEVVGLIERAIVNDPPFAFKDGGFIRAGFDAELDEIRGMR
                     SHAKDWIAQFEAGERQRSGIASLKVRYNRVFGYYIEVTSSHLKSVPADYIRKQTIANG
                     ERYITPELKEYEAKVLNSESLMEKIEANLLTQVRDQAALHYAALKAMSNGLAILDVLV
                     ALADVAEAQRFVRPRVDGSTNLTIREGRHPVVENAIGRGAFVPNDCKIDAESEQIMLL
                     TGPNMAGKSTYMRQNALIVILAQMGSFVPAAEAQIGIVDRIFTRIGAADSLSRGESTF
                     MVEMKETANILHHATRRSLILLDEVGRGTSTFDGISIAWAVAESLHECRERPRTLFAT
                     HYHELTELALAHERIKNFNFAVKEWRGEIIFLRNLVAGAASHSYGIHVARLAGMPAPV
                     IERAKVILAQLEDNQSVAPSSVVKRCVEGAAEVPVQMALFSAADNRLRQRLTQLDVVN
                     LTPIQALNVLHELSEEAKK"
BASE COUNT          525 a          778 c          853 g          531 t
ORIGIN      
        1 caagggcgtg gtcaagcgtg aagtggtccg ggtaattacc ccgggcacgg tgacggccga
       61 tgaagcgctc gacggccgtg gcaataactt tctcgccgcg gtttgccagg gcgaggcgag
      121 ctacggcctc gcggtcagcg acatcaccac gggcgagttt cgctgtaccg agatcaccga
      181 tgaaccggcg tgtttcgacg agctcggccg cgtccagcct agtgaaatct tgctggcagc
      241 ccgtgacagc cgtttgcgcg agcgcattta caaggaatac ccggcgatcc atctgacttc
      301 ggttggcgac gttactttta cggattgcac gggtgttgga ccgaaccatg cggcggatct
      361 cccagtcgaa ggcgcgcgcg cggcggcggc tattgttaat tatctcagcg ctaatatccc
      421 cgagtcggtg aagctgttga gcgatctgca cgcttacgtg gtttcgaact ttttgattct
      481 cgacgagacc acccgggtca atctggaact gatcgccacc gccaggggcg agcggcgcgg
      541 ttcgctcctg gcgatcctcg atcgcacgca aacgtccatc ggcgcgcgcc ggctgcgcca
      601 gtggctgctc tatccattgc tcgatgaagc ggcaatcggc gcgcgctacg acgccgtgca
      661 ggaactcgct gatgggttcg cctcgcggga agaactcaag ctgcgcttgg cgaaaatcca
      721 cgatctcgaa agactcagcg gccgggtgtt ggccggtagc gcgacgccga aagatttggt
      781 cgcgatcaag cagactctcg gcgccgctag cggcgtgcgt gaactcaccg ccagtttcac
      841 cgcgccactg ttggtcaact taagcgcgag tcttacggag ttacccgaag tcgtcgggct
      901 gatcgagcgg gcgatcgtca acgatccgcc attcgcgttc aaagacggcg gtttcattcg
      961 cgccggtttc gacgccgagc tcgacgagat tcgcggcatg cgcagccatg ccaaggattg
     1021 gatcgcccag ttcgaggccg gcgagcgcca gcgcagcggg attgcgtctt tgaaagttcg
     1081 ttacaatcgg gtgttcggct attacatcga agtcaccagc agccatttga agtcggtgcc
     1141 ggcggattac atccgcaagc agaccatcgc caacggcgag cgctatatca cgccggagct
     1201 aaaggagtac gaagccaagg tgctcaactc ggaaagcctc atggagaaga tcgaggctaa
     1261 tttattgacc caggtgcgcg accaggcggc gctgcactat gccgcgctca aggcgatgag
     1321 caatggtttg gcgatcttgg acgtgctggt ggcgttggcc gatgtcgctg aagcgcagcg
     1381 cttcgtccgt ccgcgcgtcg atggcagcac gaatttgact attcgtgagg ggcgccatcc
     1441 ggtggtcgag aacgccatcg gccgcggcgc ctttgtgccc aacgattgta agatcgacgc
     1501 ggagtccgag cagatcatgt tgcttaccgg gccgaatatg gccggtaagt cgacctacat
     1561 gcgccagaac gcgctgatcg ttatcctcgc ccagatgggc agctttgtcc ccgcggccga
     1621 ggcgcagatc ggcatcgtcg accggatctt cacgcgcatc ggcgcggccg attcgctctc
     1681 ccgcggcgag tcgaccttca tggtcgagat gaaagagacg gcgaatatct tgcaccacgc
     1741 gacccggcgc agcttgatac tgctcgacga agtgggccgc ggcaccagta ccttcgatgg
     1801 gatttccatc gcctgggcgg tggccgagtc gttgcacgaa tgccgcgagc ggccgcgcac
     1861 cctgttcgcg acccactatc atgagctcac cgaattggcg ctggcccatg agcgcatcaa
     1921 gaatttcaac tttgccgtca aggaatggcg cggcgaaata atttttctgc gcaatttggt
     1981 cgccggcgcg gcgagccata gctacggcat tcatgtggcg cgtttggcgg gtatgccggc
     2041 gccggtgatt gagcgggcga aggtgattct ggcacagctg gaggataacc aatccgtggc
     2101 gccaagctcc gtggtcaagc gctgcgttga gggagccgcc gaggttcccg tgcaaatggc
     2161 gctattcagc gccgctgata atcggctgcg ccagcgcttg acccaactcg atgttgtcaa
     2221 cctgacgccg atccaagctc tgaacgtcct ccatgagttg agcgaagaag ccaagaagtg
     2281 atgggccgaa atcatgagta atagtgatgg ttattaagct aggtagtcag gttagcatcg
     2341 gattagttgg attggcggca gtgtggctgt gctctgagag cacgctttca gcgcaagtcc
     2401 gcagcgctcc ggcgtcgcgc gagtcacaat cgaccgatgc gcaatcgggc tcgcccaagc
     2461 gcgcagaaaa tcaactgctg ccgccgctac gcgccgtcga gaaagataaa aagccaatgg
     2521 ctgtcgcggc ggcttcaggc cggtgacttg aacttgaact ttatccgcag cggcggcaac
     2581 ggttgatttt ctccgcgctt gggcgagccc gattgtgcat cggtcgatag cgactggcgc
     2641 gccgccggag cgctgcggac ttgcgctgaa agcgtgctct cagagca
//
LOCUS       DATIRS010001273         2475 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1670167, whole genome shotgun sequence.
ACCESSION   DATIRS010001273 DATIRS010000000
VERSION     DATIRS010001273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2475)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2475)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2475
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1670167"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..249
                     /locus_tag="VLM90_16420"
     CDS             <1..249
                     /locus_tag="VLM90_16420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14612.1"
                     /translation="PGSPRIGEIDESFDHKLLEVMRRGEGRSLVDYSVQDLLQAGDTE
                     FLNWMVVIGAAGDAKASFTAYMPDFVATGWGFVSWKLV"
     gene            277..522
                     /locus_tag="VLM90_16425"
     CDS             277..522
                     /locus_tag="VLM90_16425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14613.1"
                     /translation="MSCYDLSRLLFDLKMNEAIYQRASSDFEIVNAGYDLSSEEKDAL
                     RAGDPRKLRQLGVHGMLCLYIKRLNPQFRDNIYWAQK"
     gene            626..1417
                     /locus_tag="VLM90_16430"
     CDS             626..1417
                     /locus_tag="VLM90_16430"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HSQ14614.1"
                     /translation="MDLGLKGKVALVAGASQGMGKAAAVGFAREGAKVAICARGQAAL
                     NETAEQIRKQTGGDVLAIVADMSKPEDIKKFVDDAAKHFGRVDVVVNNAGGPPPGEFM
                     KFTDEDWQNAFNLSFMSTMRMTREAVPHLRKVGGGKVINITSYSVKEPIAGLVLSNAV
                     RSAVIGWAKTLSRELARDNILFNNVCPGRIDTDRAQKLNKARADRLGRPVEEINKEMA
                     AEVPLGRYGTAEEAGDLIVFLGSDRASYITGTTIAIDGGLVRATQ"
     gene            1430..1753
                     /locus_tag="VLM90_16435"
     CDS             1430..1753
                     /locus_tag="VLM90_16435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14615.1"
                     /translation="MVHFVIQWDLPDQKANLTVYANKAKNDWLPITLGHKGVIEVRNY
                     RNPLEVTPHVAITIDFETLDNWRDFVDSADYIRIMRELRVLGCRNFTVNIWAPSKYFP
                     ESMKP"
     gene            complement(1975..>2475)
                     /locus_tag="VLM90_16440"
     CDS             complement(1975..>2475)
                     /locus_tag="VLM90_16440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14616.1"
                     /translation="NIDVVGYHDLNRKPAFKLAMQEKNRRWFLSVAQLWHRGWSVIDV
                     TDQAAPEYCTYIPGPENTWTIQIQVADGKMITGLERIAPGWGGADGQPSAEGFFIFDV
                     SEPTEPRQIGHWKTGSTSTHRNFYAGGNMVHAAAGAPGLTGKIYRSIDIGDPSNPREV
                     GRFSLG"
BASE COUNT          539 a          668 c          749 g          519 t
ORIGIN      
        1 cccggctcgc cgcgcatcgg cgagatcgac gagagcttcg atcacaagct gcttgaagtg
       61 atgcgccggg gcgaagggcg cagtttggtt gactattccg tacaagacct cttgcaagcc
      121 ggcgatacgg aattcctcaa ctggatggtg gtgatcggcg cggccggcga tgccaaggca
      181 agctttaccg cttacatgcc ggacttcgtc gccaccggtt ggggctttgt cagctggaag
      241 ctagtttagc cgagagccta acgtcaggga gggtttgtga gctgttatga tttgagtcgt
      301 ttgttgttcg atctcaagat gaacgaagcg atctaccagc gggcgtcatc cgacttcgaa
      361 atcgtcaatg ccggttatga tctatcgagc gaggaaaaag acgcgctacg cgccggcgat
      421 ccgcgcaagc tgcgccagct gggcgtgcac ggcatgctct gtctctacat caagcggctc
      481 aatccacagt ttcgcgacaa tatttattgg gcgcagaaat aatcacaatt attcaaattc
      541 agttggctta aggatgattt tgacccacgg cagtgggttt gttagtatcc ggcacattca
      601 aaaattacca gggggaaaag caagcatgga tctcggactc aaaggtaaag tggccttggt
      661 cgccggcgcg agccagggca tgggcaaggc ggcggcggtg ggcttcgcgc gcgaaggcgc
      721 caaggtggcg atctgcgccc gcggccaagc ggcgttgaac gaaaccgcgg aacaaattcg
      781 aaaacagacc ggcggcgacg tcttggcaat cgtcgcggat atgagcaagc cggaggatat
      841 caagaaattc gtcgacgatg cggcgaaaca ttttggccgg gtcgatgtgg tggtcaacaa
      901 cgccggcggt ccgcctcccg gcgagttcat gaagtttacc gacgaggact ggcagaatgc
      961 tttcaatctc agtttcatga gcaccatgcg catgacccgg gaagcggtgc cgcatctgcg
     1021 caaagtcggc ggcggcaaag tgatcaacat tacttcttac tcagtcaaag aaccgatcgc
     1081 agggttggtg ctgtccaatg cggtgcgcag cgcggtgatt ggctgggcca agacgctgtc
     1141 acgggaacta gcccgcgaca atattctgtt caataacgtt tgccccggcc gcatcgatac
     1201 cgatcgcgcg cagaagctga acaaggcgcg cgccgaccgc ctgggccgcc cggtagaaga
     1261 gatcaacaag gaaatggcgg cggaagtgcc gttgggacgt tacggcacgg cggaggaagc
     1321 cggcgatctg atcgtgtttc tcggatctga ccgtgccagc tatattaccg gcacgaccat
     1381 cgccatcgat ggcggcctcg tgcgcgcgac tcagtaggag gacatgacca tggtgcattt
     1441 cgtgattcag tgggatctgc ccgatcagaa ggccaacctg acggtttacg ccaacaaggc
     1501 gaagaacgat tggttgccga tcaccctggg ccacaagggc gtgatcgaag tgcgtaacta
     1561 ccgcaacccg ctggaagtga cgccccatgt ggcgattacc atcgatttcg aaacgctgga
     1621 taattggcgc gatttcgtcg attcggcgga ttatatccgg atcatgcgcg agctgcgcgt
     1681 gttgggttgc cgaaatttca ccgtcaacat ttgggcgccg tctaaatatt tccccgagtc
     1741 gatgaaaccc taggaagaaa actaccgttc aaatcgttca agccgttcaa acgctgcgct
     1801 ccgttcaaat cgttgaacgg acccactggt tgactgtttt agtaccgtag atcgggttag
     1861 cccagcgtaa cccgacggtt ccgaatccga tagtccaccg gatctgggcg ccagccgata
     1921 acccacctga tggtttcagc tggtgatgac agactaacgt tgggttgcgc ttcgctaacc
     1981 taacgagaag cggccgacct cgcgtggatt actcggatcg ccgatgtcga tgctgcgata
     2041 aattttccct gtcagtcccg gcgcgccggc ggcggcgtga accatgttgc cgccggcgta
     2101 gaagttgcgg tgcgtgctgg tgctgccggt tttccagtgg ccgatctgtc tgggctcggt
     2161 cggctcgctg acatcaaaaa taaaaaaccc ttccgccgat ggctggccgt cagcgccgcc
     2221 ccagccgggg gcgatgcgtt cgaggccggt tatcatttta ccgtcggcga cctgaatctg
     2281 gatcgtccag gtgttctcgg ggcctgggat gtaagtgcaa tattccggcg ccgcctgatc
     2341 ggtcacgtcg atcacactcc aaccgcggtg ccaaagctgg gcgacggaca aaaaccagcg
     2401 gcgatttttt tcttgcatcg ccaacttaaa ggcgggcttg cggttcagat catggtagcc
     2461 gacgacatcg atatt
//
LOCUS       DATIRS010001274         1603 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_193783, whole genome shotgun sequence.
ACCESSION   DATIRS010001274 DATIRS010000000
VERSION     DATIRS010001274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1603
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193783"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1190
                     /locus_tag="VLM90_16445"
     CDS             <1..1190
                     /locus_tag="VLM90_16445"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HSQ14617.1"
                     /translation="EQSVEENDVTFIAPDGYRPKGAVLGDLTLVRQAVALLRQAQRPL
                     LIAGSAAGYTLSGESMQRFIETTRLPIVTEEQSRGLVPDDHPYVFGYFERGLNRAAAK
                     VRDADVIVLLGRKQDYVIGFCRPPHVAANARIIQIDPSPLEIGRNRGADVGMAGDVAS
                     ILEQMADEAAQYEWKDLPWLDDLRAARAAQAEWAEKLAQPKTPMHALFVHKTLKSILR
                     PDDCLVFDGGDFCHFGRSYLPADKPKHWFNVSSLGMLGSSLPTALAAKVAYPNSRVFM
                     LTGDGAFGFNGMEFDTAVRHGLNIVAIVGNDSAWGIDRQIQLGLYGRAVATDLRQSRY
                     EKIVQGLGGYGEFVERPEDLKPALERALAANKPALLNVAVERAISPRAEAAIGRRKAA
                     APK"
     gene            1451..1594
                     /locus_tag="VLM90_16450"
     CDS             1451..1594
                     /locus_tag="VLM90_16450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14618.1"
                     /translation="MGVRKAGRHTSEDIHRAIFGRRAPAAKKVEEFDEGVRRYMKKKH
                     ARR"
BASE COUNT          322 a          482 c          522 g          277 t
ORIGIN      
        1 aagagcaaag cgtcgaggaa aacgacgtga cgttcatagc gcctgatggc taccggccca
       61 aaggtgccgt gctcggcgat ctcacactgg tgcggcaggc ggtcgcgctc ttgcgccagg
      121 cgcagcggcc gctgctgatc gccggcagcg ccgccggcta cacgctctcg ggcgagtcga
      181 tgcagcgatt catcgaaacg acgcgcttgc cgatcgtgac cgaagagcag tcgcgcggtc
      241 tggttcctga cgatcacccg tacgtcttcg gctacttcga gcgcggcctg aatcgcgcgg
      301 cggccaaagt ccgcgacgcc gacgtgatcg tgctgctcgg ccgcaagcaa gactacgtca
      361 tcggcttttg ccgtccgccg catgtcgcgg cgaacgccag gatcattcag atcgatccgt
      421 cgccgttgga aatcggccgc aaccgcggcg ccgacgtcgg catggccggc gatgtcgcga
      481 gcatcctgga gcagatggcc gacgaggcgg cgcagtacga gtggaaagat ctgccgtggt
      541 tggacgacct gcgcgccgcg cgcgcagccc aggccgagtg ggcggaaaag ctcgcgcagc
      601 cgaaaacgcc gatgcacgcg ctgttcgtcc acaagacgct aaaatccata ctccgccccg
      661 acgactgtct ggtgttcgat ggcggtgatt tttgccactt cggcaggtct tatctccctg
      721 cggacaaacc gaagcactgg ttcaacgttt ccagcctcgg catgttgggg tcctcgttgc
      781 ctacggcgct ggcggccaag gtcgcttatc cgaattcgcg cgtcttcatg ctcaccggcg
      841 acggcgcttt tggtttcaac ggcatggaat tcgacaccgc cgtgcgccat ggactgaata
      901 tcgtggcgat cgtcggcaat gactcggcgt ggggcatcga ccggcagatc cagctcggcc
      961 tctacggccg cgccgtcgcc acagacctgc gtcaaagccg ctacgaaaaa atcgtgcagg
     1021 gacttggcgg ctacggcgag tttgtcgagc gtccggagga tctcaaaccg gcgctggagc
     1081 gcgccctcgc cgccaacaag ccggcgctat tgaacgtcgc cgtggagcgc gcgatcagcc
     1141 cgagagccga ggccgccatc ggccggcgca aagcagcggc gccaaagtaa gcggcgcaaa
     1201 aacgccagtc gtgaaatgag aaaaagcgga atgcgaccgg ttccgctggg tgaaattctc
     1261 aacgaggagt ttttgaagcc gctgggtcta acggcaaatg cgctcgcact ttgccgccgt
     1321 aatttaagtt catggtattg gcgcaatcaa aagttacggc tcaaggacag atttccgttc
     1381 cggcggaagt gcgacgaaaa atcggtatcc gccgggctcg gcgctggaat gggacgagga
     1441 aggcgactcc gtgggcgtgc gcaaagccgg ccggcatacc tcggaagaca ttcatcgggc
     1501 gatctttggg cggcgggcgc cggctgcgaa gaaggtggaa gagttcgatg aaggcgtgcg
     1561 gcgttatatg aagaaaaaac atgcgcgccg ttgacaccaa cgt
//
LOCUS       DATIRS010001275         2067 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1277731, whole genome shotgun sequence.
ACCESSION   DATIRS010001275 DATIRS010000000
VERSION     DATIRS010001275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2067
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1277731"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1451)
                     /locus_tag="VLM90_16455"
     CDS             complement(<1..1451)
                     /locus_tag="VLM90_16455"
                     /inference="COORDINATES: protein motif:HMM:NF014071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HSQ14619.1"
                     /translation="MSKYRVTVDTGGTFSDFVFFNEDSGEIAITKVPSTPKEPFQAVL
                     NGVKELIDQGVSARDISFFCHGTTVGTNALLEEKGAKTGLLVTQGFRGIYEVMEQTRG
                     YGPATYDLFFEKPRLLAPPFYTEEIPERVDFKGNALIPIDVESAREAVRRLKKKGVES
                     VAVCFLFSFLNPAHELKLKEIFAREFPEARLSLSCEVLPQIREFYRLSTTVINAYIQP
                     VMASYLNRLENRMREMGVTTPKLYIMQSNGGVSTFKGSAEKPVATVLSGPAGGVIASM
                     GTCERVGINNIITFDMGGTSCEVALIHQGNPVITTQGKINLRPIALPMLDIHTVSAGG
                     GTIARIDAVGGLQVGPDSAGADPGPVSYDRGGANITITDANIVTGVLDPDQFLGGRMK
                     LNKTKADNLLEEKIAKPLKLDLFEAADGVLKIINVKMEEAIKAVSSARGYDIRDFTLV
                     AFGGGGPMHAGRMALDLGIPSVLVPLTPGVHSAL"
     gene            1616..>2067
                     /locus_tag="VLM90_16460"
     CDS             1616..>2067
                     /locus_tag="VLM90_16460"
                     /inference="COORDINATES: protein motif:HMM:NF016330.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SWIM zinc finger family protein"
                     /protein_id="HSQ14620.1"
                     /translation="MSDSLTARLFNQVDRLSQERGRNYFQRGAVGFMEGDPWSLHAEV
                     QGTDLYDVQVSSDKHVINVSCTCPFFEREREPCKHIWAALLAGEQSGFLAGLGKIAAP
                     HLRGVRPESVGPKSSEPRRSARSLLAASWKQQLVSLRSQLEAADERSAS"
BASE COUNT          397 a          582 c          651 g          437 t
ORIGIN      
        1 agcgccgaat gcaccccggg cgtgagcggc accagcaccg agggaatgcc gagatcgagc
       61 gccattcgcc ccgcgtgcat ggggccgccg ccgccgaagg cgaccagggt gaaatcgcgg
      121 atgtcgtagc cgcgcgccga ggagaccgcc ttgatcgctt cttccatttt gacgttgatg
      181 attttcagca cgccgtcggc ggcttcgaac aaatcgagct tgagcggctt ggcgattttt
      241 tcctccagca agttgtccgc cttggtcttg ttgagcttca ttctgccgcc gagaaattga
      301 tccgggtcga gcacgccggt gacgatgttg gcatcggtga tggtgatgtt cgcgccgccg
      361 cgatcgtagg aaaccgggcc gggatcggcg ccggcgctgt cggggccgac ttgcaacccg
      421 cccacggcgt cgatgcgcgc gatggtgccg ccgccggcgc tcacggtgtg aatatcgagc
      481 atcggcaggg cgatggggcg cagattgatc ttgccttgcg tggtgatgac gggattgccc
      541 tgatgaatca gggcgacctc gcagctcgtg ccgcccatgt cgaaagtgat aatattgttg
      601 atgccgaccc gctcgcaggt gcccatggaa gcgatcacgc cgccggcggg accggagagc
      661 acggtagcca ccggtttttc ggcggaacct ttgaaagtcg aaacgccgcc gttggattgc
      721 atgatgtaga gcttcggcgt ggtgacgccc atctcgcgca tgcggttttc gagtctattc
      781 agataactcg ccatgaccgg ctggatgtag gcgttgatca cggtggtgct caaccgatag
      841 aactcgcgga tctgcggcag gacttcgcag gaaagcgaca agcgcgcttc gggaaattcc
      901 cgcgcgaaga tttctttgag cttgagctcg tgggcgggat tcaaaaaaga aaaaagaaaa
      961 cacaccgcca ccgactcgac gccttttttc ttgagtcgcc gcaccgcttc gcgcgcgctt
     1021 tcgacatcga tgggtatcag cgcgttgcct ttgaaatcga cgcgctcggg aatctcttcg
     1081 gtgtaaaagg gcggggcgag gagccgcggc ttttcgaaaa agagatcgta ggtcgccggg
     1141 ccgtagccac gggtctgctc catgacttcg tagatgccgc ggaagccttg cgtgaccagc
     1201 aggccggtct tggcgccttt ctcttcgagc agggcgttgg tgccgacggt ggtgccgtgg
     1261 cagaaaaacg aaatgtcgcg cgccgacacg ccttgatcga tcagctcctt gacgccgttc
     1321 aaaaccgctt gaaacggctc cttgggcgtc gacgggactt tggtgatggc gatctctccg
     1381 ctatcctcgt tgaaaaaaac aaaatcggaa aatgttcccc cggtgtctac ggtcacgcga
     1441 tacttggaca taggagattc gtctatcact aaatttcagt cgcttcaaat ctgggcgcgg
     1501 ggtaatcgac cggattgccg ttcgttgaat catgcggcca gttccatcag cgacggcgcg
     1561 gaactcactg ctaacggatt agacttttct ttgccgctac gttaatccat ttctggtgag
     1621 tgattctcta accgcgcgac tgttcaatca agtcgaccgc ctttcgcagg agcggggccg
     1681 gaactatttc cagcgcggcg ccgtcggttt catggaaggg gacccatggt cgctgcacgc
     1741 cgaggtccaa ggcacggatt tgtacgacgt gcaggtgtcg tccgacaagc acgtcatcaa
     1801 cgtttcctgc acctgtcctt ttttcgaaag agagcgcgaa ccctgcaagc atatctgggc
     1861 ggcgctcctg gcgggcgagc aaagcggttt cttggcgggt ctgggcaaga tcgccgcgcc
     1921 gcatttacgt ggagttcgtc cggagtccgt tggtccaaaa agctcggagc cgcgccgcag
     1981 cgcaagaagt ctgctggcgg cgagttggaa acagcaactg gttagcctgc gcagccaatt
     2041 ggaggcggcg gatgagcgct ccgcttc
//
LOCUS       DATIRS010001276         1636 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_392095, whole genome shotgun sequence.
ACCESSION   DATIRS010001276 DATIRS010000000
VERSION     DATIRS010001276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1636
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_392095"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(333..944)
                     /locus_tag="VLM90_16465"
     CDS             complement(333..944)
                     /locus_tag="VLM90_16465"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ14621.1"
                     /translation="MVYATVDRESYPGVGYNRNAIRDADVPKNFDDLLKPSLKGKIGI
                     SGEEIGARVVGAMLRAKGEAFVRKLAAQEGRLYSIPALGLNELVVSGEVPLTFTAVDS
                     NIRLAAARGAPVSWLPMDLVPVNAGSVAALANTQRPNAALLFIDFIIGPDGQKLLVDK
                     LGYGGARKEYPFKRWYPEQGLSSYDYAQTLERWHKTLQEVGRK"
     gene            complement(919..1284)
                     /locus_tag="VLM90_16470"
     CDS             complement(919..1284)
                     /locus_tag="VLM90_16470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14622.1"
                     /translation="MAKYSGADRERLLYDGAKKEGKLVWYTSLSTYKEVAKTFETKYP
                     GVTVEFYRAPATNLATRILGESSARRYLADTIETTPGAIMLLRDNKLLLPYYSAHLGG
                     FPEGSKKGPRRFGLRHRRP"
BASE COUNT          311 a          469 c          500 g          356 t
ORIGIN      
        1 tcgaaggcgt ggacggcggc atcatggctc tctgtcccgg caacgacgga gacggcgtct
       61 tcgtctcgac atcggaaggc gatgtccttc agtttaaccc agcgggcgcg cgcaagatca
      121 tcagcgggct gccggcgatc accgcattag cgctgggcgc gtgaatcacg aaccgcggcg
      181 accggattga tctgtcatgc cggcgccggc cggaatccag gtggtggacc gtatccgtga
      241 taccgttgcg gatgggggat ggaccccggt tttcaccggc gtgacgataa ggcggaaatg
      301 ctaggaatca gagtcgacta tcctggcgcc attcatttgc ggccaacttc ctgtagcgtc
      361 ttgtgccacc gttcaagcgt ttgcgcgtag tcgtagctgc tcagtccctg ttccgggtac
      421 cagcgcttga atgggtattc tttacgcgcg ccgccgtagc cgagtttgtc gacgagcagt
      481 ttctggccgt ccgggccgat gataaaatct ataaacagca aggcagcgtt ggggcgttgg
      541 gtattcgcca atgcggcgac gctgccggca ttgaccggca ccaagtccat gggcagccag
      601 ctaaccggcg cgccgcgcgc tgccgcgagc cggatgttgc tgtcgaccgc ggtaaacgtc
      661 agcggaactt cgcctgaaac gaccagctca ttcaagccga gggcgggtat gctgtagagc
      721 cgaccttcct gggccgcgag ttttctgaca aaggcttcac ccttggcgcg cagcatggcg
      781 ccgacgacgc gcgcgccaat ttcttcgccg ctgatgccga tcttgccttt gagcgatggc
      841 ttgagcaggt cgtcaaagtt tttcggcaca tcggcgtcgc ggatcgcgtt gcgattgtag
      901 ccgacgccgg gataggattc acggtcgacg gtggcgtaaa ccaaaccgcc gggggccttt
      961 tttcgagcct tcgggaaagc cgcctagatg cgccgaatag tagggcaaga gcaacttgtt
     1021 gtcgcgcaac agcatgatcg cgccgggggt ggtttcaatg gtatcggcga gatagcggcg
     1081 cgccgaactt tcgcccagga tgcgcgtcgc taagttggtc gccggggcgc gatagaattc
     1141 aacggttacg cctggatact tggtttcgaa agtcttggcg acttctttgt aagtgcttaa
     1201 ggacgtgtac cagacgagtt tgccttcctt cttggcgccg tcatagagca aacgctcacg
     1261 atcggcgcca gaatatttgg ccaattcaac ggcgctcgtc gcacgcggtg tttgacccca
     1321 accatttccc cataggccag ccacaatgat gatggcaatt agtacacacg gcatgtcgcc
     1381 tccagatatt gctaacgaga cgcggagaaa cgcgctttct ctgcgactct caagttaaaa
     1441 tgtttcccta ggtggtatcc gtcacacctt aaaaccatgc tcacggtacc acttctccgc
     1501 gccgggatgg agcggaacgt cgcgcggcgt ggcgtcggtg ttttctccca actggccgat
     1561 gccggtgtag gaatcctccc aaaacatctg ctctttgcgc gcgtccagtg cgtcgcagat
     1621 tttgtaggcg tcgtcg
//
LOCUS       DATIRS010001277         1579 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1277774, whole genome shotgun sequence.
ACCESSION   DATIRS010001277 DATIRS010000000
VERSION     DATIRS010001277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1579
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1277774"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..280
                     /locus_tag="VLM90_16475"
     CDS             <1..280
                     /locus_tag="VLM90_16475"
                     /inference="COORDINATES: protein motif:HMM:NF040249.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14623.1"
                     /translation="RLKVDHEIEHKGWDRAARVTVALANKQRHSQLVVHFKGTPRNPM
                     SRSEVEDKARKLTRAILPGQQLERLVVAVKDLEMIDDVSSIGDLVRSA"
     gene            280..1401
                     /locus_tag="VLM90_16480"
     CDS             280..1401
                     /locus_tag="VLM90_16480"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HSQ14624.1"
                     /translation="MKIVAFDTYPLVLPIKEIYGGAAGFLEDCRTLIVRVEIDNGLEG
                     WGEATQGRPGNTYETLETMEIMARKYFAPALIGMDLEETGAVISTLHGVRYGHPITKA
                     AIEIALFDAVGKLYRDPLCRFFGGPHRREISLVGGLGMDLGPEAIGARAGQLKQEGFQ
                     VFKIKIGQRDHRKDVERVRAVRRAVGDDAQIRVDGNASYSFVDARNILNELSQFHITD
                     AEQPLARGDLQSLAELRRAVGIPIAAQESVSSPEDALAVLEARAADLLKIKLSHIGGF
                     HRGLDVAAVVGARGLPVVIGQGSACTTILSAAEMQLHCALKNAQPGGEMTGFMRLGEQ
                     DIFSPIKVSRGRAHPPMIAGHGIEVDKEKLQRLARLPSA"
BASE COUNT          328 a          439 c          516 g          296 t
ORIGIN      
        1 tcggctcaag gtcgatcacg agatcgaaca caagggctgg gaccgcgccg cgcgcgtgac
       61 cgtcgcgctg gccaacaagc agcgccactc gcagttggtc gtccatttca agggaacgcc
      121 gcgcaacccg atgagccggt cggaagtcga agacaaggca cggaaattga cgcgcgcgat
      181 tttgccgggg cagcagttgg agcgtttggt tgtggcagtc aaagatctgg agatgatcga
      241 tgacgtgtcg tccatcggcg atttggtgcg aagcgcatga tgaaaatcgt cgcatttgat
      301 acttatccgt tggtgctgcc gattaaagaa atctacggcg gcgccgcggg tttcctcgaa
      361 gattgccgca cgttgatcgt ccgcgtggaa attgacaatg gcctcgaggg ctggggcgag
      421 gcaacccagg ggcgcccagg caatacttac gagaccttgg agacgatgga gatcatggcg
      481 cgaaaatatt ttgcgccggc gctcatcggc atggatcttg aagaaacggg cgcggtcatc
      541 agcacactcc acggagtccg ctacggccat ccgatcacca aagcggccat agaaatagcg
      601 ctcttcgacg ctgtgggaaa actatatagg gatccgcttt gtcgattttt cggcggaccg
      661 catcggcggg agataagttt agtgggcgga ttgggcatgg atctcgggcc ggaggcaatc
      721 ggcgcgcgcg ccggccagct caagcaagag ggcttccaag tcttcaagat aaaaatcggc
      781 cagagagatc atcggaagga tgtcgaacgg gtgcgcgccg tgcgccgcgc cgtcggcgat
      841 gacgcgcaga ttcgcgtcga cggcaatgct tcctactcat ttgtcgatgc gcgaaacatc
      901 ttgaacgagc tcagccagtt tcatatcacc gacgcggaac aacccttggc acgcggcgat
      961 ctgcaaagtc tcgccgagct gcgccgcgcc gtcggcatcc cgatcgccgc ccaggagagc
     1021 gtgagctcac cggaagacgc gttggcggtg cttgaagctc gcgcggcgga tcttttgaag
     1081 atcaagctca gccacatcgg cgggtttcat agagggctcg acgttgccgc ggtggtcggt
     1141 gcccgcgggc ttccggtggt gatcggccag ggcagcgcgt gcacgacgat cctttccgcg
     1201 gccgagatgc agctccactg cgcattgaag aatgcccagc cgggcggcga gatgaccggg
     1261 ttcatgcgcc tcggcgagca agatattttc agtcccatca aggtatcgcg ggggagggcg
     1321 catccgccca tgatcgcggg acatggcatc gaggtcgaca aagaaaagtt gcagcgccta
     1381 gccagactgc cctcggcgta actcattggc attgccggtt tggtcggcgc cgtcgaagat
     1441 ttagagaagc tggacgacgt ctcgcgcagc gcgattacct gcggagcgca tgagaagata
     1501 gtcccgcctt ggccgcgggc aagccgtatt cgtggttcgt aggggcggac ctgcgtgtcc
     1561 gcctaagtga ttcatccca
//
LOCUS       DATIRS010001278         1606 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_883737, whole genome shotgun sequence.
ACCESSION   DATIRS010001278 DATIRS010000000
VERSION     DATIRS010001278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1606
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_883737"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1202
                     /locus_tag="VLM90_16485"
     CDS             <1..1202
                     /locus_tag="VLM90_16485"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HSQ14625.1"
                     /translation="ANPVIEVCRRTWPDTPILLLVCCARGHRPDIQTRADCDDFSYCP
                     FHEEEFLHRVRFLLQMFSGTAIDNENLCAKEILHFGALVGTSEKFLAAIRAIPPMAES
                     DATILMSGQTGTGKELFSRAIHYQSRRQRHPFIPVNCAAIPDHLFENELFGHVKGAYT
                     DATSAEKGLIAEAEGGTLVLDEIDALSLVAQAQLLRFLQDREYRPVGSARSVRADVRV
                     IASTNADLLQRVEASQFREDLYYRLNSLSLPLPALRERMEDVAPLTAHILDRFAKENG
                     RPVAALAPSAMDKLMDYSWPGNVRELESIMTRALTFSRAPILKAEDIQLPSAAAGEPA
                     GARSLREAKIKTVANFERRYLATLLIQHQGNVTHAARAAGKERRSFQRLLRKHHLDRQ
                     TFISEPR"
BASE COUNT          331 a          464 c          465 g          346 t
ORIGIN      
        1 cagcgaatcc ggtcatcgaa gtttgccggc ggacatggcc ggacacgccg atcctgctgt
       61 tggtctgctg tgcgcgtggt catcggccgg atatccaaac gcgcgccgat tgcgacgatt
      121 tctcctattg cccgtttcac gaagaggagt ttctccatcg cgtccggttt ctgctgcaaa
      181 tgttttccgg tacagcgatc gataacgaga acctatgtgc caaggaaata ttgcatttcg
      241 gcgctttggt cggcaccagc gaaaagttcc tggcggcgat tcgtgctatt ccacccatgg
      301 ccgagtcgga cgcaactatt ctaatgagcg gtcaaacggg cacggggaaa gagctgtttt
      361 cgcgggcgat tcactatcaa agccgcaggc agcgtcatcc atttattcca gtcaattgtg
      421 cagctatacc cgaccacttg tttgaaaacg agctgttcgg ccatgtcaaa ggagcttaca
      481 cagacgccac atcggctgag aagggcctga tcgccgaagc tgagggcggc actctggtgc
      541 tcgacgaaat cgatgcttta agcctggtcg cgcaagcaca actcttgcgc tttctgcaag
      601 atcgagagta ccgcccggtg gggtcggcgc gttcggtgcg ggctgacgtt cgggtgatcg
      661 cttcgaccaa tgccgatctg ctgcaacggg tcgaagccag ccagtttcgc gaggaccttt
      721 actatcggct caactctctt tcgctgccgc tgccggcatt gcgcgagcgc atggaagatg
      781 tcgcgccgct gacggcgcat atcctcgatc gcttcgccaa ggaaaatggc cgtccggtcg
      841 ccgcgctcgc gccgtcggcg atggataaac tgatggatta ttcctggccg ggaaatgtcc
      901 gcgagctcga gagcatcatg acccgggcgt tgacgttttc acgcgcgccg atactcaagg
      961 ctgaagatat tcagctgccg tcggccgcgg caggcgagcc ggcgggagct cggtcgttgc
     1021 gcgaggcgaa gatcaagacc gtcgcaaact tcgagcggcg ttatctcgcg acgctgctca
     1081 tccaacacca aggcaacgtc acccacgccg ccagggcggc cggcaaggaa cggcggtcgt
     1141 tccagcgcct gctgcgcaag catcatctcg atcgccaaac tttcatctcc gagccgagat
     1201 aattgtcgta gcgagatctt tcgccgggga aaagaatggc cgcaaagaac gcaaagggcg
     1261 caaaataata tcgggagctt ggctttggcg catcgagaaa tttgcccaag ccaaagactc
     1321 tcggattcgg atatgcctct cgccaaggcg caaagacgcc aagttcggaa ttgttgtcat
     1381 ttcgatcctt cggcgaactc agggtagact ccgggagaaa tctattttgg atccctcgca
     1441 ttcgctcagg atgacgggca ttagcccgtc acctttgcgc ctttgcgcct ttgcgagata
     1501 tattccgaga ccgaccggtg cgcgaagcgc accctacgaa aaccttcgtg tacttcgtgc
     1561 cttcgcggtg aacccgactt gtctcatttc ggttgcggct gtgccg
//
LOCUS       DATIRS010001279         1964 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_392225, whole genome shotgun sequence.
ACCESSION   DATIRS010001279 DATIRS010000000
VERSION     DATIRS010001279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1964)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1964)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1964
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_392225"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1070)
                     /locus_tag="VLM90_16490"
     CDS             complement(<1..1070)
                     /locus_tag="VLM90_16490"
                     /inference="COORDINATES: protein motif:HMM:NF012431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HSQ14626.1"
                     /translation="MTGPNLAQTIVDYLISQKVRHIFGVLAHTLFPFGDAIAKRPELR
                     FINTQHEGGAGNMALGYARVTKQPAVCLVSAGGGATNIVTAVAQAYKEAVPLFVISSD
                     IGTASFAKGHWASWHGMEHVRLFQPITKQSARLGRIEELGSVLDSLFRQTTRGRQGPV
                     FFCIPEDLQETHLPEPISFAASANPAAPAVDGSTVNAAVELLLSARAPVLLAGTGVDW
                     AQAQDEVKDLAELLALPVASSYTAKGVFSEKHPLALGCLGNGGRMYARPFFQEADLVL
                     AVGTSFSEGTTLGFGHKVIPEQARIIHIDTDPEQFGRIYPAELAIQADAKSALRAIID
                     NAKARSPKPSNDRAPAIQHAKQ"
     gene            1316..1690
                     /locus_tag="VLM90_16495"
     CDS             1316..1690
                     /locus_tag="VLM90_16495"
                     /inference="COORDINATES: protein motif:HMM:TIGR00377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HSQ14627.1"
                     /translation="MESTVQNFANVVIVQVEGRIDHSTAPAFGSVLLPHVEGCVGDDK
                     KLLVDLSKVNYMSSAGLRVLMIAAKGCRKQEGKVVLAGLQPSVREVFKIGRFDMVLDT
                     YPTVRDALAAISPAAAAIYIDR"
     gene            1696..>1964
                     /locus_tag="VLM90_16500"
     CDS             1696..>1964
                     /locus_tag="VLM90_16500"
                     /inference="COORDINATES: protein motif:HMM:NF024970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HSQ14628.1"
                     /translation="MQGLAISKRTEALTIDAVAQCIEFASAQARQAGFTPARVDEVEL
                     VVEEVVANICHYSYGDRLGNVELVCRLIDGSILELEFVDGGQPFD"
BASE COUNT          398 a          522 c          624 g          420 t
ORIGIN      
        1 ctttgcttgg catgttggat cgctggggcg cggtcgttcg atggcttggg cgaacgcgct
       61 ttggcgttgt cgatgatggc gcgtagggcg ctcttggcgt cggcctggat ggcgagctcg
      121 gccggataga tgcggccaaa ctgttccggg tcggtgtcga tgtgaatgat tcgagcttgc
      181 tcggggatta ctttgtgtcc gaaaccgagg gtcgtgcctt cgctgaaact ggtgccgacg
      241 gcgagcacca gatcggcttc ctgaaaaaac ggcctggcat acatgcggcc gccgttgccg
      301 aggcagccga gagcgagcgg atgcttttcc gaaaagacgc ctttggcggt gtaactgctg
      361 gccacgggca gcgctaacag ctctgccaga tctttgactt cgtcctgtgc ctgggcccaa
      421 tcgacgccgg tgccggcgag caggaccggg gcgcgggcgc ttagtaataa ttctaccgcg
      481 gcgttgaccg tgctcccatc caccgccggg gcagcgggat tcgccgaagc ggcaaaggaa
      541 atcggctcgg gcaaatgggt ttcttgcaaa tcttctggga tgcagaaaaa caccggtccc
      601 tggcggccgc gggtggtttg acgaaacaac gagtcgagca ccgaaccaag ttcttcgatc
      661 cgtcccaaac gtgcgctctg cttggtgatc ggttggaaca aacgcacatg ctccatacca
      721 tgccacgaag cccagtggcc tttggcgaac gacgccgtgc cgatgtccga cgagatgaca
      781 aacagcggca ccgcttcttt gtacgcctgg gcgaccgcgg tgacgatatt ggtcgcgccg
      841 ccgccggccg agaccaggca caccgccggc tgtttagtca cccgcgcgta acctagcgcc
      901 atgttaccag cgcctccctc atgttgggta ttgatgaagc gcaattccgg ccgcttggcg
      961 atggcgtcgc cgaagggaaa aagcgtgtgg gcgagcacgc cgaaaatgtg gcgcaccttt
     1021 tgcgaaatta agtaatcgac aatggtctgg gcaagattag gtccagtcat ttgatttgct
     1081 ccttttaatc gctaggcctg cttagttcag cttccgcaaa aaagcaatgg tcgtggaccc
     1141 ttagacgcct ttttgacggt gccagtagct ggcgaggatg aggataattt tacgttcacg
     1201 gacgtatccg gtcgtgctat catgggcgca atcagagcgg cgttggaaca gtgcaccgat
     1261 ttttccaaac ggcgcctaaa ctactcccta gaggggatgc agacgaggta tagccatgga
     1321 atcgacagta cagaattttg ctaacgtcgt catcgtgcag gttgaaggtc ggattgatca
     1381 tagcacggcg ccggcatttg gcagcgtgct tctgccccat gtcgaaggat gcgttggtga
     1441 tgacaaaaaa ctgctggtgg acttgagtaa ggtcaattac atgagcagcg ccggtctgcg
     1501 cgtgctgatg atagcggcca aggggtgccg caagcaggaa ggcaaagtgg tgctggccgg
     1561 cttgcaaccg agtgtccggg aagttttcaa gatcggccgt ttcgatatgg tcttagatac
     1621 ctatccgacc gtccgcgacg ccctcgcggc gatctcgccg gccgccgcgg cgatctatat
     1681 cgaccgttag tcggtatgca gggtctagca atatcgaagc gcaccgaagc gctcaccatc
     1741 gatgcggtgg cgcagtgcat tgagttcgcc agcgcgcaag cgcgccaggc ggggtttacc
     1801 ccagcgcggg tggacgaagt cgaactggtg gtcgaagaag tggtggcgaa tatatgccac
     1861 tacagttacg gtgatcgcct gggcaatgtc gaactggtct gccggctgat cgacggttca
     1921 atcttggagt tagaattcgt tgacggcgga cagccttttg acat
//
LOCUS       DATIRS010001280         4679 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_981756, whole genome shotgun sequence.
ACCESSION   DATIRS010001280 DATIRS010000000
VERSION     DATIRS010001280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 4679)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4679)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4679
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_981756"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            239..1183
                     /locus_tag="VLM90_16505"
     CDS             239..1183
                     /locus_tag="VLM90_16505"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14629.1"
                     /translation="MRTLDLLASDSSHLPFLYVFKESKVMEKYGFEIDLHIVGGAKAP
                     TMAHRAKLALAGEIDFLSGLHHETYRERAKGEKRLTYLAQAQNNWDDRLVVRPEIKTV
                     DDLKGKKIVCHSKAPCVSGNLRAVLEECGLKPEEINMDVIDDTSGKFLEFVDEITSGK
                     AVGALVDMPFDLYGIKKGLHILALPDRPVIHNTTLLATSDYIKENPETVDAFIKGFIE
                     ALHYFKTKPAEVVAILKNNLAARYGLQDDEYYVHLQREWAKLLSKKPYPLPAAIQNVY
                     DLDVGKDPKMQHIGPMEPWDLHYLRQIDDTGFIDKLYA"
     gene            complement(1624..2652)
                     /locus_tag="VLM90_16510"
     CDS             complement(1624..2652)
                     /locus_tag="VLM90_16510"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HSQ14630.1"
                     /translation="MKSLVLVTALTVFLTLPPPAGAQGLRGAAIGRGNSLGSAQTGTI
                     TSQTRQGGASTTTITTTTAPGRALAPNAQIRSTPTVTPQLYVPPVFHGGGVPVVQPNT
                     LRHAPTVVIETGRPPRHPHRPHRPHWPIIYPYPGIVIFDAPYYSSNMVITEMAPGVMR
                     EERRVTDGPDESRTRSSGQLAPFDPTPQEVVDRMLRLAAVKPGDVLYDLGAGDGRVVI
                     AAAKKFAVKAVGFEIDPGLVKLARENVRKQGVEHLVEIRQQDFLTADLSLPSVVTLYL
                     SYDGNLTVRPRLMSQLKTGARVVSYTFDMAEWQPKVAENYRDVAGNNHMIYLWEIGGP
                     LAVSDGRR"
     gene            complement(2709..3986)
                     /locus_tag="VLM90_16515"
     CDS             complement(2709..3986)
                     /locus_tag="VLM90_16515"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HSQ14631.1"
                     /translation="MKEPASIESAAPALAQGFLAKTFTSLTHRNYRYLWFGTVFMSAG
                     QWVQQVTLGWLVYDLTGSSVLLGVLNGLRALPFLIASPIAGVFADRMDRRRLILACEC
                     FLAALTFLMGVLVASGILAVWHLFTFTLLTGIAWAFVDPIRQSLVPVLVPKQDLMNAV
                     ALNSAAFNMTKVIGPSAGGLLIVAFGAAGNFFVQAAAYAVVVLIVYWMVVPATPGEAR
                     RTTPLANLTEGLIYVWSNPIVFALMTAAFVPRVFAMPFQILMPVFQKDVLHVGPEGLG
                     MLLAAPGLGALLAGLALATLSSRIKRQGVFMLVSLVVLGFLMILFSWTTSFTLALLTL
                     VCQGVFQIFYMATTHTMIQLIVPDHLRGRVMSLYALDRGLMPVGSLFAGVCAHYVGAP
                     MTVSLMGAIVVVLALLIAWRAPVVRDLGVLSQS"
     gene            complement(4124..>4679)
                     /locus_tag="VLM90_16520"
     CDS             complement(4124..>4679)
                     /locus_tag="VLM90_16520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14632.1"
                     /translation="VFLVGGHSERSDLAPLLEAKEKALQSNEQKLKTLEAQLAQTREE
                     LTVSTARLEELRNKLNVQEKSLAAAQQKRKDAEREVNRLASRPAPALPPVRSRAQSPA
                     LPPPPPTPAARRILEPGLYETVRATDVHEEPLSSSRVLNRIGGGTEITVVRGLGQWLE
                     VRSKHGNPPGFVRTEDAKFVARAN"
BASE COUNT         1066 a         1387 c         1329 g          897 t
ORIGIN      
        1 cgccttgcct ctggatcttt ttgagcagcc tgcaagagaa gaatttaaat cgccgaacaa
       61 gccgccatcg ttaccggcgc cggcagcggt ctaaactcga ataacggccg cacgaaatct
      121 tcgagccgtt caagcgcatt gctccgttca atccgtttga ataccaagcc ctacgtgagg
      181 taaagaaacg gcaacgtcgt tagcaaattt attcggcaat cggccaggga gatcaaccat
      241 gcgaacctta gacttactcg ccagcgactc gtcccaccta ccctttctct acgtgttcaa
      301 agaatccaag gtcatggaga agtatggctt cgagatcgat ctgcatatcg tcggcggcgc
      361 caaagcgccg accatggcgc atcgcgccaa actcgcgctg gccggcgaga tcgatttctt
      421 gagcgggctg catcatgaga cttaccgcga gcgcgccaag ggcgaaaagc gcttgaccta
      481 tctggcccag gcgcagaaca actgggacga ccgtttggtg gtgcgcccgg aaatcaaaac
      541 ggtcgacgac ctcaagggca aaaaaattgt ctgccattcc aaagcaccct gcgtgtccgg
      601 taatttgcgc gcggtcttgg aagaatgcgg ccttaagccg gaagaaatca acatggacgt
      661 gatcgacgac acttccggaa aatttttaga attcgtcgat gagattacct ccggcaaagc
      721 cgtcggcgcc ctggtcgata tgccttttga cctctatggg atcaaaaaag gattgcacat
      781 tctcgcgctg cccgaccggc cggtgattca taacaccacg ctgctcgcga ccagcgatta
      841 catcaaggaa aacccggaaa ccgtcgacgc ctttatcaaa ggtttcatcg aagcgctgca
      901 ctatttcaaa accaagccgg cggaagtggt ggcgatcctg aagaacaatt tagcggcgcg
      961 ttacggcctg caagacgacg aatactacgt ccacttgcag cgcgagtggg ccaagctgct
     1021 atccaagaaa ccctacccgc tgccggcggc gatccaaaat gtctacgacc tcgacgtcgg
     1081 caaggatccc aagatgcaac acatcggacc gatggagccc tgggatttgc actatcttcg
     1141 gcagatcgac gacaccggct ttatcgacaa gctgtacgcc taggcaaaat gaaaaatctc
     1201 cgttacccct tggactcgcc tcggggtaaa catagatttg tcggatattt tgctgatagt
     1261 tcatctagcc ggcatgcgct gaccaagtcg accgccccac ggtttgattc acttcgacgc
     1321 ggtaaattaa acatcactcg gctctatgcc gaaaattttg ccagtgtcga ctcgcagttg
     1381 actttatatt cgtcatcatt ctcgcgaaag cgggaagcca agtgacggac ggcgtccgtc
     1441 agaccgttga agaacggtat ccagattctg gggatggacc ccggtgttca ccggggtgac
     1501 gatagcgcgg gcatgacgga acttctcttc gcctgaagca tgcgctgagc aagatcgaag
     1561 gagcgacgga tttcaactat ctccgagaga gacattaatt tattctacgc gaccgtaacc
     1621 cgcctagcgc cggccatcgc taaccgccag cgggccgccg atctcccaca aataaatcat
     1681 gtggttattg ccggcgacgt cgcgataatt ttcggccacc ttgggctgcc actcggccat
     1741 gtcaaaagtg taagaaacca cccgcgcgcc ggtcttcaac tggctcatga ggcgcggccg
     1801 gacggtcaga ttaccgtcgt aggagagata gagcgtcacc accgatggca acgataaatc
     1861 cgccgtcaag aagtcctgct ggcggatttc caccagatgc tcgacgcctt gtttgcgcac
     1921 attctcgcgc gccagtttga ccagaccggg atcgatctcg aagcccactg ccttgacggc
     1981 gaatttcttg gccgcggcga tcaccacgcg gccgtcgccg gcgccaagat cgtagagcac
     2041 atcccctggt ttcaccgccg caagtcgtag catgcgatcg acgacttcct gcggcgtcgg
     2101 atcgaaggga gccaattgcc cgctgcttct ggtacgcgat tcgtccggcc cgtcggtaac
     2161 gcggcgctcc tcgcgcatca ctccgggtgc catttcggta atcaccatgt tcgacgaata
     2221 gtaaggtgcg tcgaaaatca cgatgcctgg atagggatag atgatcggcc aatgcggtcg
     2281 gtgcggtcgg tgcggatggc gtggtggccg tccggtctcg atgaccaccg tcggcgcatg
     2341 gcgcagcgta ttgggctgga ccaccggaac tccgccgccg tggaataccg gcggcacgta
     2401 cagttgcggc gtcacggttg gagtactgcg gatctgtgcg ttgggcgcaa gtgcccggcc
     2461 aggtgctgtc gtggtcgtga tcgtcgttgt gctggccccg ccttgtcgtg tttgactcgt
     2521 gatcgtcccg gtttgcgccg accccagcga gtttccccta ccgattgcgg caccacgcaa
     2581 gccctgggct ccggcaggcg gcggtaaggt caaaaacacc gtgagcgcag tgaccagtac
     2641 tagagatttc ataacgcctc cgacttacga tggcatcata gaaatctccc ccctgccaag
     2701 tcaacagact aactttgcga caaaacgccg aggtctcgca ccaccggcgc gcgccaggcg
     2761 atgagcaagg ccagaacgac aacgatggcg cccatcaaac tcaccgtcat cggcgcgccg
     2821 acatagtggg cgcatactcc ggcaaacagt gaacccaccg gcatgagacc gcggtcgagc
     2881 gcgtaaaggc tcatcacccg gccgcgcaga tggtcgggta cgatcaattg gatcatcgtg
     2941 tgggtggtcg ccatgtaaaa gatttgaaac acgccttggc agacgagcgt caagagcgcc
     3001 aacgtaaatg acgtggtcca ggaaaacagg atcatcagaa acccgagcac gaccagactg
     3061 acgagcataa acacgccctg gcgtttgatc cggctcgaca gcgtggccag ggcgagaccg
     3121 gccagcaacg cgcccaaacc aggggcggct aagagcatgc ccaacccttc cggccccacg
     3181 tgtaggacat ctttctggaa caccggcatg aggatttgaa acggcatggc gaagactcgc
     3241 ggcacaaacg ccgcggtcat cagggcgaag acgatgggat tggaccatac gtagataaga
     3301 ccctccgtga gattcgccaa aggagtagtg cgccgcgcct cgccgggtgt cgccggaaca
     3361 accatccaat agacgattaa aactaccacc gcgtaggcgg cagcttgaac gaagaagttc
     3421 cccgccgcgc cgaaggcgac aatcagtaag ccgcccgccg aagggccgat gactttggtc
     3481 atgttgaacg ccgctgagtt cagcgccacg gcattcatga ggtcctgctt tggcaccagc
     3541 accggcacca aactttggcg gatcggatcg acgaacgccc aagcgatgcc ggtcaaaagc
     3601 gtgaaggtaa acaaatgcca gaccgccagt atccccgaag ccaccaagac acccatgagg
     3661 aaagtcagcg cagctaaaaa gcattcgcaa gcaagaatga gccggcgccg gtccatgcgg
     3721 tcggcgaaga cgccggcaat gggactggcg atgagaaacg gcagcgcacg tagtccattg
     3781 aggacaccga gcaacaccga cgaaccggtc agatcgtaaa ccagccagcc cagggtcact
     3841 tgctggaccc attggccggc gctcatgaac accgtgccaa accataggta gcgataatta
     3901 cgatgggtca gcgaggtgaa agtcttggcg agaaaaccct gcgccagcgc cggcgcggca
     3961 gattcgatac ttgcgggctc tttcaaggca attgttcctg gtcgcgctgg aaatccccga
     4021 gcgccgctag agccagcgaa atatttgtgc acggagaaag cgcgaaataa ctagcgcgaa
     4081 gagccgcagt atggagctta cggtctaaga tcggcgctgt tgtctaattg gctctggcga
     4141 cgaatttagc atcttcggtg cgaacaaagc caggaggatt gccatgtttt gagcgcactt
     4201 ccaaccactg gccgaggccg cgcaccactg tgatttccgt gccgccgccg atccggttca
     4261 gcacgcgcga gctgctcagc ggttcctcat ggacgtcggt ggcacgcacg gtttcgtaca
     4321 accccggctc gaggatccgg cgcgccgccg gcgttggcgg tggtggcggc aaagccggac
     4381 tctgcgcgcg cgaccgcacc ggtggtagcg cgggcgcggg gcgacttgcc aacctattta
     4441 cttcccgctc ggcgtccttg cgcttttgct gcgccgccgc cagactcttt tcctggacgt
     4501 taagtttgtt tctaagctct tccagccgcg ccgtgctgac tgtcaattct tcacgcgtct
     4561 gcgccaactg cgcttcgagt gtcttgagct tttgctcgtt ggattgcagc gctttttcct
     4621 tggcttccag taacggcgcg aggtctgagc gctcgctgtg tccgccgacg agaaacaca
//
LOCUS       DATIRS010001281         2183 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_687292, whole genome shotgun sequence.
ACCESSION   DATIRS010001281 DATIRS010000000
VERSION     DATIRS010001281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2183
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_687292"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..387
                     /locus_tag="VLM90_16525"
     CDS             <1..387
                     /locus_tag="VLM90_16525"
                     /inference="COORDINATES: protein motif:HMM:NF013624.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14633.1"
                     /translation="MVVGLGQSSRPRIEVETRATNRRRASKSGAPRSITAGGKAWMPA
                     TMPLKVTRPAAKSINAGDYVCNFSMYVMLEELERQDHNSRFAFVHIPFNHDRQAACRY
                     VERIVGKCFNIADTLEPDRAAKWLGG"
     gene            complement(376..1245)
                     /locus_tag="VLM90_16530"
     CDS             complement(376..1245)
                     /locus_tag="VLM90_16530"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: protein motif:HMM:NF010568.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HSQ14634.1"
                     /translation="MPDTILSGLTLHSRGKVRDIYDLGDKLLMVASDRISAFDVILPT
                     PIPEKGKILTQLSEFWFGQIGDIVPHHLLSTKVDDFPAVCQPHRAALEGRSMLVKKST
                     PAPVECIVRGYITGSGWKDYQKTGAVCGIALPPGLLEAARLDQPIFTPSTKAAVGDHD
                     INITFAEMTDKIGKVKAERMRDATVAIYQRARVVAETKGIIIADTKFEFGMEGDDILL
                     IDEVLTPDSSRFWPMDGYRAGKTPDSFDKQFVRDYLLKLNWDMKAPAPELPPDIVRKT
                     QDKYFEALRRLTA"
     gene            complement(1379..>2183)
                     /locus_tag="VLM90_16535"
     CDS             complement(1379..>2183)
                     /locus_tag="VLM90_16535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14635.1"
                     /translation="IPHHADITVVFTPMARIVDHTTLENLHYFQEQCLRDGRKCELRG
                     LEIFHRFSSHPLSGGLHDAKLHKEKEQLTVRQQGLSEFARNRRWEFAPTVISALNEHN
                     FLYLARGSAKEESNVITGWHKGLAIKMFDYSFTDILQYSAETRHTMILMKVHDGAPYF
                     PDCVLEPDGFVGGHLIYDRDIHYTEGIHFPQRYHLHGPDEQAVRAFFSADLIRFFDTY
                     PEFYVETRGNWLLAFRVNAELEEPASLAVLLSLADAIAHVCVERTDLSA"
BASE COUNT          441 a          598 c          658 g          486 t
ORIGIN      
        1 atggtcgtgg gtttgggcca aagttcgcgg ccgagaatcg aggtcgaaac gcgcgcgact
       61 aatcgccgcc gggccagtaa gtccggtgcg ccgcggtcga ttaccgcagg cggaaaagct
      121 tggatgccgg caaccatgcc gctcaaggtg acccgacccg cggcgaagtc gatcaacgcc
      181 ggcgactatg tctgcaactt ctcgatgtat gtgatgctag aggagcttga acggcaagac
      241 cacaatagcc gcttcgcctt tgttcacatt ccctttaatc acgaccgcca ggcggcgtgc
      301 cgctacgtcg aacggatcgt cggcaagtgt ttcaatatcg ctgatacgtt ggagcccgat
      361 cgcgccgcca agtggctagg cggttagccg ccggagcgct tcgaaatatt tgtcctgggt
      421 tttcctgacg atgtcgggcg gcaattccgg cgccggcgct ttcatgtccc aattgagttt
      481 gagcagatag tcgcgcacga actgtttatc gaaactgtcc ggggtcttgc ccgctcggta
      541 gccgtccatg ggccagaagc gtgacgagtc gggggtcagc acttcgtcga tgagcaggat
      601 gtcgtcgcct tccatgccga attcgaactt ggtatcggcg atgatgatgc ccttggtctc
      661 ggccacgacg cgggcgcgct gatagatcgc cacggtggcg tcgcgcatcc tctccgcttt
      721 caccttgccg atcttgtcgg tcatttcagc gaaagtaatg ttgatatcat gatcgccgac
      781 ggcggccttg gtcgacggcg taaagatcgg ttggtcgagc cgcgccgctt cgagcaagcc
      841 tggcggtagg gcgatgccgc acaccgcgcc ggttttttgg taatccttcc agcccgagcc
      901 ggtgatataa ccgcgcacga tgcactccac cggcgccggc gtgcttttct tcaccagcat
      961 gctacggcct tcgagagcgg cgcgatgggg ttggcagacg gcggggaagt cgtcgacctt
     1021 ggtgctgagc aaatgatgcg gcacgatatc gccgatctgg ccaaaccaaa attccgacag
     1081 ctgggtgagg atcttgcctt tttcgggaat cggcgtcggc aggatcacgt cgaaggctga
     1141 gattcggtcg ctggcgacca taagcagctt atcgccgaga tcgtagatgt cgcgcacttt
     1201 gccgcggctg tggagagtta atccagaaag tatcgtgtct ggcataggga acctttctca
     1261 tcagacgctt taaggttcgc tcgggcgccg caacggtgtt gccaaaacac cagtggccgc
     1321 cgcctttcaa cgactggcca atcgtcgatg gaagcgcgct agattagctc aagcctaatt
     1381 aggcgctcaa gtccgtgcgc tcgacgcaga catgggctat ggcgtcggct aaagataaca
     1441 aaaccgctag cgatgctggc tcttcgagct cggcgttgac gcgaaatgcc agcagccaat
     1501 tgccgcgtgt ctctacgtaa aattctggat aggtatcgaa aaacctaatt aggtcggcgc
     1561 taaaaaatgc tcgcaccgct tgttcgtcgg ggccgtgcaa atgataacgt tggggaaagt
     1621 ggattccctc ggtgtagtga atgtctcgat cgtagattag atggccgccg acgaaaccgt
     1681 ccggctcgag gacgcagtcg ggaaaatacg gcgcgccatc gtgtactttc atcaagatca
     1741 tggtgtggcg ggtttcagcc gaatactgca atatatccgt gaaactgtag tcgaacatct
     1801 tgatggcgag gcctttgtgc cagccggtaa tgacgttgct ttcttctttc gccgaaccgc
     1861 gcgcaagata gagaaaatta tgctcgttga gcgcgcttat gacggtcggc gcgaactccc
     1921 agcgacggtt tctggcgaac tccgacaacc cctgctggcg caccgttagc tgctctttct
     1981 ccttgtgcaa tttggcgtca tggagcccgc ccgataacgg atggctggag aagcggtgaa
     2041 aaatttccag cccgcgaagt tcgcatttac gcccgtcgcg caagcactgt tcttgaaagt
     2101 agtgcaggtt ctccaaggtt gtgtggtcga cgattcgggc catcggcgtg aataccaccg
     2161 tgatgtccgc gtggtgcggt atc
//
LOCUS       DATIRS010001282         1899 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_293615, whole genome shotgun sequence.
ACCESSION   DATIRS010001282 DATIRS010000000
VERSION     DATIRS010001282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1899
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_293615"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..450
                     /locus_tag="VLM90_16540"
     CDS             <1..450
                     /locus_tag="VLM90_16540"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HSQ14636.1"
                     /translation="MGEEKGVAFMRELAKQVGLRNGRTILAQLVAAGEFKGALSAYSQ
                     TFETMKPAGAPVDWVYLNPVFANIHPVGISAKAPHPNAAKLFIDFVLSKRGQELVRGM
                     SRIPDRTDTPPEQARFIEGIKPAFAPAEVLENFEGYAKTFHEVFGGR"
     gene            636..>1899
                     /locus_tag="VLM90_16545"
     CDS             636..>1899
                     /locus_tag="VLM90_16545"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ14637.1"
                     /translation="MSQDLRSYISLIREHKLLLDIKKEVDPLTNLAGLAYRGENERGK
                     ATMFHNLKGYPNWSAVSYMCGSREKMALGLGTTKDKALTELGGRIAKGLIKPKIVEDG
                     PVKEIIWKGDDADLGRIPIHVHSDSDRGVPLIGSAMQFVKDPETGTQNIALQRDHIKG
                     PKKMGIFVHPKRHTDICMQKYWKEGKPMPVATVIGHHPAYYIASTWTTGYETDEIDIT
                     GALLQEPVNVVRCESIDVMVPADAEIVIEGEVPPNYMEDEGPFCEHAGMTHGTLQHPV
                     INVKCITMRKNAIYYALQGGRPISESQPLDGFPMELVLYARIKDVGGFIDVKDVVALP
                     YAGGSHIIVVQMTPRKMGEVRSTLMALLSSPYLHPKIGIAVDEDIDPHNAQAIMYAMS
                     TRVNPKSDVFIIPDTLCHTGDLTAELLPN"
BASE COUNT          431 a          546 c          547 g          375 t
ORIGIN      
        1 atgggcgaag agaagggggt ggcttttatg cgcgagctcg ccaaacaggt cggactgcgc
       61 aatggccgga cgatccttgc tcagctggtt gccgccggtg aatttaaagg ggcgttaagc
      121 gcctactcgc aaaccttcga aacgatgaaa ccggccggcg cgccggtgga ttgggtttat
      181 ttaaatcctg tgttcgccaa cattcacccc gtcggcatct ccgccaaagc gcctcatccc
      241 aacgccgcca aactgtttat cgacttcgtg ctgtcgaagc gcggccagga gctggtgcgg
      301 ggcatgagcc gcatccctga ccgcacggac acgccgcccg agcaagcgcg cttcatcgaa
      361 ggcatcaaac ccgccttcgc gcctgctgaa gtgctggaaa acttcgaggg ctacgccaaa
      421 acctttcatg aagtcttcgg tgggaggtag ggcgccaaac gcggttgcgg cccttcgaca
      481 ttgctcagga catggtttcg tttctcgggt tgcggctttg cggaaacaga ttgccggcgc
      541 gccaacattt gacctgccca acctagggtt gattgcaatt gaccgccggg ttgcattaca
      601 accattctac aaattcaatc aggagtgctg aagccatgtc ccaggacctg cgcagttata
      661 ttagtttaat tcgcgagcac aaactgctgc tcgatattaa aaaggaagtc gacccgctga
      721 ccaacctggc cggcctcgct tatcgcggcg agaacgagcg gggcaaggcg accatgttcc
      781 acaatctcaa ggggtatccc aactggtccg cggtcagtta catgtgcggc agccgggaaa
      841 agatggcgtt gggtttgggc acgaccaagg acaaagcgtt gacggagttg ggcggacgca
      901 tcgcgaaagg attgatcaaa ccgaaaatcg tcgaagacgg gccggtaaaa gaaatcatct
      961 ggaaaggcga tgatgccgat ctggggcgga ttccgatcca tgttcattcc gacagcgacc
     1021 gcggagtgcc gttaatcggc tcggcgatgc aattcgtcaa ggatcctgag accggcacgc
     1081 agaatatcgc cttgcagcgc gatcacatca aaggtccgaa gaagatgggc atcttcgttc
     1141 accccaagcg ccacactgat atttgcatgc agaaatactg gaaagagggc aagccgatgc
     1201 cggtggccac cgtgatcggt catcacccgg cctattatat cgcgtcgacc tggacgaccg
     1261 gttacgaaac cgatgagatc gatattaccg gcgccttgtt gcaagagccg gtcaacgtgg
     1321 tgcgctgcga gtccatcgac gtcatggtgc cggcggatgc cgagatcgtc atcgaaggcg
     1381 aggtgccgcc caactacatg gaagacgaag ggccgttttg cgagcatgcc ggcatgaccc
     1441 atggcacgct gcagcacccg gtcatcaatg ttaaatgcat caccatgcgc aagaatgcga
     1501 tttattacgc tctccaaggc ggccggccga tttccgaatc gcagccgctg gacggtttcc
     1561 cgatggaatt ggttctctac gcgcgcatca aagatgtcgg cggcttcatc gacgtcaaag
     1621 acgtcgtcgc cttgccctat gccggcggca gccacatcat cgtcgtgcag atgacgccgc
     1681 gcaagatggg cgaagtgcgc agcaccctga tggcgctcct gtcgagtccc tatttgcacc
     1741 cgaagatcgg catcgccgtg gacgaggata tcgacccgca caacgcccaa gcgatcatgt
     1801 acgcgatgtc gacccgggtg aatcccaaat cggatgtctt cattattccc gatacgctgt
     1861 gtcacaccgg cgatctcacc gccgaactgc tgcccaatc
//
LOCUS       DATIRS010001283         1536 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_96809, whole genome shotgun sequence.
ACCESSION   DATIRS010001283 DATIRS010000000
VERSION     DATIRS010001283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1536
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96809"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            118..1092
                     /locus_tag="VLM90_16550"
     CDS             118..1092
                     /locus_tag="VLM90_16550"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14638.1"
                     /translation="MTAQLIIAAVLLLTLPRFSSAQKLLLAHVAINPGQSMFHVAKDS
                     GILAKYGFSGDVVLIPGTPRTIQALIAGDLDYVLAGAPASLRARAQGADVTILSTLSS
                     YSSQRVFVRPDSKLTSFNELKGKIIGVTQYGSGGDTFLRAALRKSGIKEPEVTILQMG
                     GTPGVAQGLESGRIEVGVLGDSGLLLVFRGRAKPLKGASAREMGFRGTDAPLTTTDRK
                     IKSDRAGVVRFMQAYLETIHYFQTNKAGTARILKKYMGGTSEEDISLWCDDLRGILKP
                     VPYADEEALRAELEMMNIPGNQIPAGYINNSILDELKKSGFIDKLWKN"
     gene            1110..1475
                     /locus_tag="VLM90_16555"
     CDS             1110..1475
                     /locus_tag="VLM90_16555"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSQ14639.1"
                     /translation="MGKIRHIAIKVEDQEKAANFYKQTFGMTEAWRGPVRDDGNRSIY
                     LTDGYINMAVLPARGGREGIDHFGFQVEDLDGTLKSAQASGAKADAEVKPKDGRFAEM
                     GVHDPVGQLVDVTVHGWKS"
BASE COUNT          346 a          392 c          479 g          319 t
ORIGIN      
        1 cctttgcgcc ctgtgcgtgg tttgcgcgag gtattgcaaa tttcggttgc ggctatgccg
       61 cgctaggtaa atcgtcgcca ttgacatgcc gcgacgacgg cagtaaatcc aaaggctatg
      121 acggcgcaat taatcatcgc agcggttttg ctcttaacct tgccgcggtt ctcgtcggcg
      181 cagaaactgc tcttggctca tgtggcgatc aatccggggc aaagtatgtt tcatgtcgcc
      241 aaggactcgg ggattctcgc caaatacggc ttttcggggg atgtagtgct gatcccgggg
      301 acgccgcgga caatccaagc cctgatcgcc ggcgacctgg attacgtcct cgccggcgcc
      361 ccggcctcgc tccgcgcccg cgcccagggc gccgacgtta cgattctttc gacactgtcg
      421 agttattctt cgcagcgcgt gttcgtcagg ccggattcga agttgacgag ctttaatgaa
      481 ttgaaaggca aaattatcgg cgtcacgcag tatggttcgg gcggcgatac ttttctgcgc
      541 gcggcgctgc gcaaatccgg cattaaagaa cctgaagtga cgattcttca gatgggcggg
      601 acgccgggtg tggctcaagg cttggagtcg ggacgaatcg aggtcggcgt gctcggcgac
      661 tcaggcttgc tactggtgtt tcgcggcagg gccaagccct tgaaaggcgc gagcgcgcgg
      721 gaaatgggct tccgcggcac cgacgctccg ctgacgacga ccgatcgaaa gatcaagagc
      781 gatcgcgccg gcgtcgtccg cttcatgcag gcttatcttg aaacgataca ctatttccaa
      841 accaacaagg ctgggacggc gcgcatcttg aaaaaataca tgggcggcac cagcgaggaa
      901 gatatctcgc tgtggtgcga cgatctgcgc ggaatcctca aaccggtgcc ctatgccgac
      961 gaggaggcgc tgcgcgctga gctggagatg atgaacatac cgggaaacca aatccccgcc
     1021 ggctatatca acaatagtat tctcgacgag ttaaaaaaga gtgggttcat agacaaactg
     1081 tggaaaaatt aaaaaggagg attcggacca tgggaaagat cagacatatc gcgatcaagg
     1141 tggaggatca ggagaaggcg gccaattttt ataagcagac cttcggcatg actgaagcct
     1201 ggcgcggccc ggtgcgcgac gacggtaatc ggtcgattta cttgaccgac ggttacatca
     1261 acatggccgt gctgccggcg cgcggcggcc gcgaaggcat cgatcatttc ggtttccaag
     1321 tggaagactt ggatgggacg ctaaaaagcg ctcaagcctc cggcgcgaaa gccgacgcag
     1381 aggtgaagcc aaaagacggc cgcttcgccg agatgggcgt gcatgatccg gtgggacagt
     1441 tggtcgatgt cacggtgcat gggtggaagt catgagatga cattttggat tttcgatttt
     1501 ggattttgga ttggggaata gcgggtgcat aaaaca
//
LOCUS       DATIRS010001284         1984 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1179735, whole genome shotgun sequence.
ACCESSION   DATIRS010001284 DATIRS010000000
VERSION     DATIRS010001284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1984)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1984)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1984
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1179735"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..970)
                     /locus_tag="VLM90_16560"
     CDS             complement(<1..970)
                     /locus_tag="VLM90_16560"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ14640.1"
                     /translation="MNLEPTFAQANYYQGKTITFIVGTKAGDVYDLYPRLLAEYMPKY
                     IPGNPNIIIQNVAGAASLIAANQVYGIAKPDGLTLGAIYPALYFDQLVKRPEVKYDWS
                     KFAWIGSPVGSNHMMYMRSDTPFKTIDDVRGAATPPKCGTSGTTSTGYYIPKLLEEAV
                     GAKFDIVTGYQAGQDVDLAVERGEVVCRSFTITAFHAREPYFSWRKRKFVHVLYQTGN
                     KRDGRLKDVPTMYELMDRYKTTEPVRKLAKVILIASDLGRPIVAPPGVPAERLKIIRD
                     AFNKSVSDPAFLAEAEKRRLEIDPSTWDELEPLAKEAMATPADVIER"
     gene            complement(1096..>1984)
                     /locus_tag="VLM90_16565"
     CDS             complement(1096..>1984)
                     /locus_tag="VLM90_16565"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HSQ14641.1"
                     /translation="LLAEFLPKYIPGNPNIIIQNVAGAASLIAANQLYNIAKPDGLSL
                     GAIYPALYLDQLVNRPEVKYDWNKFAWIGSPVSSNHMMYMRADTPYKTIDDVRAATHP
                     PKCGTSGITSTGYYIPKLMEEAIGAKFDIVAGYQAGLDVELAVERGEVVCRSFTITTF
                     HSREPFFTWRKKNFVRVLYQTGTKRDARLKEVPTMYEIMDRYKTAEPVRKLAKVILIA
                     SDLGRPIIAPPGVPADRLKILRDAFIKTVNDPAFLAEAERRKLEIDPSSWEEIESLVK
                     EAMATPADVVERMKKVLGM"
BASE COUNT          394 a          542 c          589 g          459 t
ORIGIN      
        1 tgcgttcaat cacatcggct ggcgtcgcca tggcttcctt ggccaagggt tcgagctcat
       61 cccaagtcga tggatcgatt tccaaccggc gcttttccgc ctcggctaag aatgccgggt
      121 cgctcaccga cttgttaaag gcatcgcgga tgattttcaa gcgctcggcc ggcacgcccg
      181 gcggggcgac gatgggccgg cccaggtcgc tggcgattaa aataaccttg gcgagcttgc
      241 gcaccggctc ggtggttttg tagcggtcca tcaattcgta catggtcggc acatccttca
      301 accgcccgtc gcgcttgttg ccggtttgat agagcacgtg gacgaatttg cgcttgcgcc
      361 agctgaagta gggctcgcgg gcgtgaaacg ccgtgatggt gaatgagcgg cagaccacct
      421 cgccgcgctc gacggcgagg tctacgtcct ggccggcctg gtaaccggtg acgatatcga
      481 atttggcgcc gaccgcttct tccaagagtt tgggaatata atagccggtc gacgtggtgc
      541 ccgaggtgcc gcatttgggc ggcgtcgcgg cgccgcgcac atcgtcaatc gtcttgaagg
      601 gcgtgtcgct gcgcatgtac atcatgtggt tggagcccac cggactgccg atccaggcaa
      661 acttgctcca gtcgtatttc acctccggcc gtttcaccaa ttgatcgaaa taaagcgccg
      721 gataaatcgc gccgagcgtc aacccgtcgg gcttggcgat gccgtacacc tggttcgccg
      781 cgatcagcga cgccgcgccg gcgacgtttt gaatgatgat gttaggattg ccgggaatat
      841 acttcggcat gtactccgcc aacagccgcg ggtagagatc gtaaacatcg ccagccttgg
      901 tgccgacgat aaacgtgatg gttttgcctt ggtaataatt cgcttgcgcg aatgttggtt
      961 caaggttcaa ggggttcaag agttcaaggg tcagaataag aaacccgaaa agagtccgat
     1021 tgaacccttg aacccttgaa cttttgcacg cgtattttgt tcgatgcgtc atgcaaacct
     1081 cacacttggt tgccgttaca tgcccaagac ttttttcatg cgttcgacca catcggcagg
     1141 cgtcgccatc gcttctttaa ccaacgactc gatctcctcc caagacgatg gatcgatttc
     1201 gagcttgcgc cgttccgcct cggctaagaa agccgggtcg ttgaccgtct tgatgaaagc
     1261 atcacggaga attttgagac gatccgcggg aactccaggc ggagcgatga tcggcctgcc
     1321 gagatcgctg gcgattaaga tcaccttggc gagcttgcgc accggctccg ccgtcttgta
     1381 gcggtccatg atctcataca tggtcggcac ttctttgagg cgcgcgtcgc gtttcgtgcc
     1441 ggtttgatag agcacgcgca cgaagttttt cttgcgccaa gtaaaaaaag gctcgcggga
     1501 atgaaaggtc gtaatggtga atgaccggca gaccacctcg ccgcgctcga cggcgagttc
     1561 gacatccagg ccggcttgat agccggcgac gatatcgaat ttggcgccga tggcttcttc
     1621 catgagtttg ggaatgtagt agccggtcga ggtaatgccg ctggtgccgc atttcggtgg
     1681 gtgcgtcgcg gcgcgcacgt cgtcgatggt tttgtagggc gtgtcggcgc gcatgtacat
     1741 catgtggttg gaactcaccg gactgccgat ccaggcgaac ttattccagt catacttgac
     1801 ctccggtcta ttcaccagtt ggtccaagta aagcgcggga tagatcgccc caaggctcaa
     1861 gccgtcgggc ttagctatgt tgtagagctg gtttgccgcg atcagtgaag ccgcaccggc
     1921 gacattctga atgatgatgt tgggattgcc gggaatatat ttcggcaaga attccgccag
     1981 caat
//
LOCUS       DATIRS010001285         2718 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_687687, whole genome shotgun sequence.
ACCESSION   DATIRS010001285 DATIRS010000000
VERSION     DATIRS010001285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2718
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_687687"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(16..1107)
                     /locus_tag="VLM90_16570"
     CDS             complement(16..1107)
                     /locus_tag="VLM90_16570"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HSQ14642.1"
                     /translation="MKIKSIRSQVIRLPVDEPLADGPPSGRAHNMFVTVRIETSDGVE
                     GVGATFFGGVLSATLKQAIDQLGAMIVGDDPLRIEALTQKLRTAAASAGPGGILTLAI
                     SAIDMALWDVKGKVLGQSLGTMLGGLRERVPTYASGALVRSYPLDHLLKACRTLVERG
                     FKQMKTQMALPGDVTPAQEAERARLTREAVGPDIDLMCDINQRWSVNQAIDIGRRVED
                     LHFFWLEDVTVHDDFTGLARVANALATPLASGECLYGITPFRHTIETGAADIIMIDLI
                     RVGGIANWMKVAAMAEAFNLPVVSHLLPEIHVHLVSAIPNGLTVEYMPWSFRLWQEVP
                     APIKGELVVPTKPGLGLEFSRELDRYVVG"
     gene            1450..2034
                     /locus_tag="VLM90_16575"
     CDS             1450..2034
                     /locus_tag="VLM90_16575"
                     /inference="COORDINATES: protein motif:HMM:NF014052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stage II sporulation protein M"
                     /protein_id="HSQ14643.1"
                     /translation="MNRHQRRAYLRELRPFLIASLIFFTVGVAFGVAVANRFPGMADH
                     FGDSITGFLKTFRGLPKPQLAVAIFLNNSVKTLAAILLGLAMGIVPALFLVVNGVVLG
                     VVFFLSSQSRGVWPSLLAILPHGVLELAAVFLGTAIGLMLGDLVLKRVLRKSDAKIRP
                     ALGRALRFFAIVIVPMLLIAALIEAFVTTALLGT"
     gene            complement(2132..2557)
                     /locus_tag="VLM90_16580"
     CDS             complement(2132..2557)
                     /locus_tag="VLM90_16580"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HSQ14644.1"
                     /translation="MARFEIHPQLLADCHRLGKFAFCHVLLNKTAVLPWFILVPQTDV
                     NDLLDLPDEQRIAAINEAAMIGQFIKRHLGYGKINFAAIGNVVPQLHLHIVGRKPDDP
                     CWPAPVWGHLTESREFPIQRVAEIRELLVRYCSLKVESR"
BASE COUNT          581 a          835 c          735 g          567 t
ORIGIN      
        1 ctcgatgatc caaacttaac ccacgacata tcgatccaac tcccggctaa actccaaacc
       61 caaccccggt ttagtcggca ccaccagttc accttttatc ggcgccggca cttcctgcca
      121 caagcggaac gaccagggca tgtattcgac ggtcaagccg ttgggaatcg ccgaaactag
      181 atggacatgg atctccggca acagatggct taccaccggc aaattgaacg cctcggccat
      241 ggccgcgact ttcatccagt tggcaatacc gccgacccgg atcaaatcga tcatgatgat
      301 atcggcggcg ccggtttcga tggtgtggcg aaacggcgtg atgccgtaca agcactcgcc
      361 gctggccagt ggtgtggcca aggcattggc gacacgcgcc aaaccggtga aatcgtcatg
      421 gacggtgacg tcttcgagcc aaaagaaatg caaatcctcg acccgccggc caatgtcgat
      481 ggcctgattg accgaccagc gttgattgat atcgcacata agatcgatgt cgggccccac
      541 cgcttcgcgg gtcaagcggg cgcgctcggc ctcctgcgcc ggcgtgacat cgccgggcaa
      601 tgccatttgg gttttcattt gcttgaagcc gcgctcgacc agcgtgcggc aagctttgag
      661 cagatgatcg agcggatagc tgcgcaccag cgcgccgctg gcgtaggtcg gaacgcgctc
      721 gcgcaggccg ccaagcatgg tgccaaggga ttggccgagg actttacctt tgacatccca
      781 tagcgccata tcgatggccg agatcgccaa agtgagaatg ccgccgggcc cggcgctcgc
      841 cgccgccgtg cgcagtttct gcgtcagcgc ttcgatgcgc agcggatcat cgccgacgat
      901 catggcgccc aactgatcga tcgcctgctt gagcgtcgca ctgagcacgc cgccaaagaa
      961 cgtcgcgccg acgccttcga caccatcgga agtctcgatc cgaactgtga cgaacatgtt
     1021 atgcgctcgt cccgatggcg ggccatcggc caaaggctcg tcgacgggta ggcgaatcac
     1081 ttgggaacgg atgcttttga ttttcatagt tagccctttg ctcctcgcac tactttagcg
     1141 atcctccacc gataccacag cgtaacaaat actagaagat tcaagattgc gtacaccgca
     1201 acataacacc actgcgccgg cgccgaatga ccgaccgact cgatgccata gctcgctaca
     1261 agccaggacc aaagcggcaa caagataaag taacggcgag cctcagtgga atgcagccga
     1321 gcagcacagc acctatgcgc agcggagcac ccatcgtcac cctaaattcc ggcaatcgag
     1381 ccgactcaat ccattgatag cttgcagttg ggtatctagc acgcacggtt tctgttagga
     1441 ctacctttca tgaatcgcca ccaacgacgc gcttacttac gcgaactgcg ccccttcttg
     1501 atcgctagtc taatattctt caccgtcggg gtggcattcg gcgtggccgt ggcgaaccgc
     1561 tttccaggga tggccgatca tttcggcgac tccatcaccg gttttctcaa aaccttccgc
     1621 ggcctgccca agccacaact cgccgtcgcg atctttctca acaattcagt gaagacattg
     1681 gcggcgatct tgttaggctt agccatgggc atcgtgccgg cgttgtttct ggtcgtcaac
     1741 ggcgtcgtcc tcggcgtggt cttttttctc tcatcccaaa gccgcggcgt gtggccgtcg
     1801 ctattggcga tcttgcccca cggtgtcctc gaactcgccg cggtatttct cggcaccgcc
     1861 atcggcctca tgctcggcga tctggtgctg aaacgagtgc tgcgaaaatc cgacgcgaaa
     1921 attcgccccg ctctcggccg cgccctgcgc tttttcgcca tcgtcatcgt gccgatgttg
     1981 ctcatcgccg cattgatcga agccttcgtc accaccgccc tgctcggaac ctaatgatgc
     2041 gccatggagt tagcaggccg ccgaccccgt tcggaatgga atctaacttg cggaaatatc
     2101 tcgaagccat tttcgacgaa cctctgacgc atcatcggga ttctacttta agcgaacaat
     2161 agcgcaccag taattcacga atctctgcga cccgttggat tggaaattct cgcgattcgg
     2221 taagatggcc ccacaccggc gccggccagc agggatcgtc tggttttctg ccaacgatat
     2281 gcagatgcag ctggggcacg acgttaccga tggcggcaaa gtttattttg ccgtagccga
     2341 gatgtcgttt aatgaactgg ccaatcatcg ccgcctcgtt tatcgcggca attctctgct
     2401 catcagggag atcaagtaga tcattgacgt cggtttgcgg aacgagaatg aaccagggca
     2461 acacggcagt cttgttgagc aggacatggc agaaagcgaa ctttcccagc cggtgacagt
     2521 cagcgagcag ctggggatga atttcaaatc gagccatgga ccatgcgcct caagaataga
     2581 ttacttcaca gcgctagcgc agcgaaagcc aacgctatca tcacggtgct cgggcggcgc
     2641 atgcatccgc ttcgtgctgg tcagccgttc gggggcatcg taccagccgc cgccgcgcag
     2701 cactttgtcg gtgccgct
//
LOCUS       DATIRS010001286         1621 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_687740, whole genome shotgun sequence.
ACCESSION   DATIRS010001286 DATIRS010000000
VERSION     DATIRS010001286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1621
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_687740"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..279)
                     /locus_tag="VLM90_16585"
     CDS             complement(<1..279)
                     /locus_tag="VLM90_16585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14645.1"
                     /translation="MSSVFAAAAPRKVVITPASFSEREGILIVAQNQGFFRKHNLAVE
                     LVLMPSAPVAFAALAAGESQFYFGTTSGTSLGAVVNGLDGVFVAGFINK"
     gene            716..>1621
                     /locus_tag="VLM90_16590"
     CDS             716..>1621
                     /locus_tag="VLM90_16590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14646.1"
                     /translation="MATNENVKRLRIILDGSTAEQKLPGIVVHALDADGKVLESAPLR
                     DEGTLQISARMTRAAKLLIGPADAKPDTRRTFYVLGAEELKRAIAVGEIAIAGKIWQP
                     WFPIRRCVSGAVRRCFPYLDVIDGLLVDHRLAALPSVRKVTGSRAIVRWPWHRCSPLC
                     FGTVEVYRRICCCEPPVIFDPPFDWGDLPIEVNPDFPPIPPEDPIGPIGPRPEPNPAP
                     FELQNLIVTGGAVDQRKVQLLRAKAQLPKLSGSLRQDFIVRHPFLWCHCGVTQKVAQG
                     FIQDGGNFSVCWSEPPRILLPHCHEE"
BASE COUNT          329 a          510 c          439 g          343 t
ORIGIN      
        1 tttgttaatg aaaccggcga cgaatacccc atcgagccca ttcaccaccg cgcccaagct
       61 cgtgcccgag gtcgtcccga agtaaaactg cgactccccc gccgccaacg cggcgaatgc
      121 cacaggcgcg ctcggcatca acaccaactc cacagcgaga ttgtgcttgc gaaaaaaccc
      181 ctggttctgc gcgacgatga gaattccctc gcgctcgcta aaactcgccg gcgtgatgac
      241 caccttccgc ggcgccgccg cggcgaatac tgacgacacg ctcgaactca agattgtgac
      301 acacacgaaa agaagcttca gaacattcat tgagttttcc cgctttcggt tgaggcaatt
      361 gaagaacgac tcgctaatct accatccaat atggtctgaa cgacgcagag gatcaagacg
      421 agattcttta gcgagttctt ttccattgtg ccaactgcct gcgcgcgttt ttttcaatct
      481 cgcgacaggt gaagccattt gttcacccac tgtcgacgaa agcatacagt gccgtttacg
      541 cagctggaca gtcgccgcgc caacttgtca gccgctgtca cctgcgcact tccagtgaca
      601 tgaatcgcat caatttctag tttctggccc ccgcgttgct cctgtatcga ttggtctgtc
      661 acgagttgtc acaacccggc gggagaacaa tctgtttttg aaggagagga gttctatggc
      721 gaccaatgaa aacgttaaac gtctgcgaat tatactcgac ggcagcacgg cggagcagaa
      781 gcttcccggc atcgtcgtgc acgcgctgga tgccgacggc aaggttcttg agtcagcgcc
      841 attgcgcgat gaaggcacgc tgcagatcag cgctcgcatg acccgagccg ccaaactgct
      901 catcggtccg gcggatgcca aaccggacac gcgccggact ttttatgtcc tcggcgcaga
      961 ggagctcaag cgggcgatcg ccgtagggga aattgccatt gccggaaaga tctggcaacc
     1021 ctggtttccg attcgccgct gcgtcagcgg cgcggtgcgc cgctgttttc cgtatctcga
     1081 cgtcatcgac ggcttgctcg tcgatcatcg gctcgcggcg cttcccagtg tgcgcaaagt
     1141 gaccggcagc cgcgccatcg tccgctggcc ctggcatcgc tgttctccgc tgtgcttcgg
     1201 caccgtcgag gtctaccggc gcatttgctg ctgcgaaccg ccggttattt tcgatccgcc
     1261 gttcgattgg ggcgatctgc ccatcgaagt caatccggac tttccgccaa tcccacccga
     1321 agatccgatc ggccccatcg gtccgcgccc ggagcccaat cccgcgccct tcgagttgca
     1381 gaatcttatt gtaacgggcg gcgcggtcga ccagcgcaaa gttcaactgc tgcgcgccaa
     1441 agcgcaattg cccaagctgt ccggcagctt gcggcaggat ttcattgttc ggcatccgtt
     1501 cctttggtgt cactgcggcg tgacgcagaa agtcgcccag ggtttcattc aagatggcgg
     1561 caacttcagc gtctgctggt cggagccgcc gcgcatattg ctgccgcact gccacgaaga
     1621 a
//
LOCUS       DATIRS010001287         2809 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1769866, whole genome shotgun sequence.
ACCESSION   DATIRS010001287 DATIRS010000000
VERSION     DATIRS010001287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2809)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2809)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2809
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1769866"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1774
                     /locus_tag="VLM90_16595"
     CDS             <1..1774
                     /locus_tag="VLM90_16595"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HSQ14647.1"
                     /translation="TLAAMLGVEQGKLVGGKFTRFVARDAQDALYLHQHAVLGADVRQ
                     ECDLRLRRADGKTFAARMETIGIRDGVSAACHYRSAIIDITERNRAEQALRDNEERLR
                     LAVDGAGMGTWDVELKTGATVWNRRHYQIMGFDPSNGPPNWEMWRSRIHPDDLDRVMA
                     ARKSALETQGLYNPEHRIIRADNGEIRWVAPFARYIYNDAGAAIRFAGVDFDITESKH
                     AEQALRESEERFRSTFENVAVGIAHVAPDGRWLRVNDKFCQIVGYRREQLLAKTFQDI
                     THADDVSANLALLRRALAGEIETYAMEKRYIRSDGSAVWVNVTTSLVREARTQVPLYF
                     ISVVENISKRKRAEDQLRGFAEDLERQVAARTAELRASREQLRALAERVHELQEEERA
                     QLARELHDEFGAAFTALKVDLHWIMARLPKSVDGVEEKARVMSDLIDNSVESVRRTAS
                     LLRPRLLDDFGLVAAIEWQTAEFQRRTAIQCVTRLPEEVELDQAMSTALYRILQETLT
                     NVARHAKATKVHIGLQIDGGKVLLDVQDNGIGFDPEAAMHDRSFGLFGVQERAYAFGG
                     HVRFESRPLHGATVIVEIPLSRNA"
     gene            1779..2414
                     /locus_tag="VLM90_16600"
     CDS             1779..2414
                     /locus_tag="VLM90_16600"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HSQ14648.1"
                     /translation="MARILIVEDHPIYRRGVRDILAGNRNFTDFGEAGDASRAAELLR
                     KERWDAVVLDINLPGKSGLEFLKEVRLAYPKLPVLVLSGYAEEQYALRMLKAGASGYF
                     TKSRTPEELIGALTRLLQGKKYISESIAEKALAQLQPGAEKPAHELLSDREFEVLKLI
                     VQGIAPRDICLQLCISPRTVSTYRARLLQKFNFKSNAQLVQYAIANKLFDD"
BASE COUNT          599 a          811 c          862 g          537 t
ORIGIN      
        1 gacattggcg gcgatgctcg gcgtcgaaca gggcaaactc gtcggcggca aattcacccg
       61 ctttgtcgcc cgcgacgcgc aggacgcgct ctacctgcac cagcacgcag tgctcggcgc
      121 tgacgtgcgc caggaatgcg acctgcgcct gcgccgggcg gatggtaaga ccttcgcagc
      181 gagaatggaa accatcggca tccgcgacgg cgtttcggct gcttgccact accgcagcgc
      241 gatcatcgac atcaccgagc gcaaccgggc agagcaggcg ttgcgcgaca acgaagagcg
      301 gctgcggttg gcggttgacg gcgccggcat ggggacctgg gacgtggaat tgaaaactgg
      361 ggcaacggtg tggaaccggc gccattatca aataatggga tttgatccga gcaacggccc
      421 gcctaactgg gagatgtggc gctcgcgcat tcatcccgat gatctcgatc gcgtcatggc
      481 ggcgcgaaag tctgctctag agacacaggg tttgtataac cccgagcatc gaattattcg
      541 cgccgacaac ggcgagattc gttgggtcgc gccgtttgcg cgttatatct acaacgacgc
      601 cggcgcagcg atccgtttcg ccggcgtcga ttttgacatc accgagagca agcatgccga
      661 gcaggcgctg cgcgagagcg aggagcgttt ccggtcgacc ttcgagaatg tcgctgttgg
      721 aatcgctcat gtggcgccgg acgggcgatg gctaagagtg aacgacaagt tctgtcaaat
      781 tgtcggctat cgccgggaac agttattggc taagactttc caagatatca ctcatgccga
      841 tgatgtcagc gccaatctgg ccttgctgcg gcgagcactg gctggggaga tcgagaccta
      901 cgcgatggaa aagcgctata tccgcagcga tggttcagcg gtttgggtca acgtgacgac
      961 atctctcgtt cgtgaggcgc gaacccaggt gccgctctat ttcatctctg tggtcgagaa
     1021 tattagcaaa cgtaaacgcg ccgaggatca actgcgcggg tttgccgagg atctggaacg
     1081 gcaagtcgcg gcgcgaaccg ccgagctgag agcatcgcga gagcagctca gggccctcgc
     1141 cgagcgtgtg cacgaactcc aagaagaaga gcgcgcgcag ctggcgcgcg agcttcatga
     1201 cgagttcggc gccgcattca ccgcgctaaa agtcgatctt cactggatca tggcgcggct
     1261 ccctaagagc gtcgatgggg ttgaagaaaa ggcgcgagtg atgtcggatc tgatcgacaa
     1321 ctctgtcgag tcggtgcgac ggacggctag tctcttgcgg ccccgcctat tggatgattt
     1381 tggcctggtg gcggccatcg agtggcaaac cgcggaattt cagcggcgaa ccgccatcca
     1441 gtgcgtcacc aggttgcccg aggaagttga attggatcag gcaatgtcga cagcgctata
     1501 ccgcattttg caagagactc tcaccaatgt ggcgcgtcat gccaaggcaa ccaaggttca
     1561 cattggctta cagatcgacg gcggcaaggt gttgctcgac gtccaggaca acggcatcgg
     1621 cttcgacccc gaggcggcca tgcatgaccg ttctttcggt ctcttcggcg tgcaagaacg
     1681 cgcctacgcc ttcggcggcc atgttcgctt cgaaagccgg ccccttcacg gcgccacggt
     1741 gatcgtcgaa ataccgctct cgagaaatgc ttagtgccat ggccagaatc ttaatcgtcg
     1801 aagatcatcc gatttatcgc cgcggtgtgc gcgacattct ggccggcaac cgcaacttta
     1861 ccgatttcgg cgaagccgga gacgccagcc gggcggccga attgctgcgt aaagaacgtt
     1921 gggacgccgt ggtgctggac attaacttac cgggcaagag cggtctggag tttttgaagg
     1981 aagtgcggct cgcttatccc aaactaccgg tgctcgtctt gagcggttac gccgaggagc
     2041 agtatgctct gcgcatgctc aaggccggcg cctccggcta tttcaccaag agtcgcacgc
     2101 cggaagaatt gatcggcgct ctgaccagac tgctgcaggg caaaaaatac atcagcgagt
     2161 cgatcgccga gaaagcgcta gcgcaactcc aacctggagc ggaaaagccg gcccatgaac
     2221 tgctctccga ccgggaattc gaagtgctga aactgatcgt ccagggaatc gcgccgagag
     2281 atatttgcct ccagctctgc atcagcccgc gcaccgtcag cacctatcgc gcccgcttgc
     2341 tgcaaaagtt taatttcaag agtaacgcgc aactggtcca atacgcgatc gccaacaagc
     2401 tcttcgacga ctaaccgctg agattgaccg gcccagcctg gacggcgatt gcaatgtcca
     2461 aatcagggat ggttgcaatc gctcgcccct tggatccgtc ggcccaggcg cagcacgctc
     2521 agggattgct tgaggcgaag ggaagttccg tcatgccgac gcagtgcctg cccccggacc
     2581 cgatccgggg caggtatccc agggtgacgt tgggtgggaa aatgcaaaac cgggattccc
     2641 gctttcgcgg gaaagacgag atagagcaaa tcgcgttcga gtcgatgcat cgaaatccct
     2701 cggcttcgag ctgcgggtag tttaatttcc ccgccaggga gatcacccct cgccgtgaag
     2761 ctcgcccaga tcacggcttc gggctcttgc cctccagcaa gcgcggtta
//
LOCUS       DATIRS010001288         1770 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_392937, whole genome shotgun sequence.
ACCESSION   DATIRS010001288 DATIRS010000000
VERSION     DATIRS010001288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1770)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1770)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1770
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_392937"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..318)
                     /gene="larC"
                     /locus_tag="VLM90_16605"
     CDS             complement(<1..318)
                     /gene="larC"
                     /locus_tag="VLM90_16605"
                     /EC_number="4.99.1.12"
                     /inference="COORDINATES: protein motif:HMM:NF014072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel insertion protein"
                     /protein_id="HSQ14649.1"
                     /translation="MRLAYGDLIGGISGDMFVAALIDLGLPLAKLKAELKTISTLRFA
                     VKTAKKTVHAVRATQFQVICPRQEPPRSWQQIRRLIEGSKLSAPVKTTAIDIFTRLAQ
                     AEAK"
     gene            complement(396..1607)
                     /locus_tag="VLM90_16610"
     CDS             complement(396..1607)
                     /locus_tag="VLM90_16610"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HSQ14650.1"
                     /translation="MRIETERKMKRWREQRWILDQVIQTRGIDWDQGRTGKIIRNCGP
                     TVEKDLTELCSRIKKFVDIPREFSQAAARREEQGRLAEAAGKLNEARDHYYIAACFYT
                     NAMWAIYEDGNRERIHWQERKRATYDKFIQYAGRRIERVELPYDGKKVQALLHLPVNR
                     KAGEKVPCVMYIPGMDGVKEDHPASGDPFIERGFALLSVDCPGHGETREGGIKCTASN
                     VEDVAKLVADYLVTRPEIDAERLGIMASSMGSYWAPRVVAAEKRFKACAVSGVCMEPG
                     QFAIFNMSSPTFKLNYMYMSGYDDEAAFDEFCKSLSLEGVTAKITCPYMIVAGEDDEH
                     CDMKFVYKLMGEAPAPKLLYVFEGERHSIRNPKARPLVIDWLIDTLLGKPFKPEIIRI
                     ETSGKEVHREW"
BASE COUNT          313 a          488 c          540 g          429 t
ORIGIN      
        1 ctttgcttcg gcttgagcga gccgggtgaa gatatcgatg gcggtggttt taactggagc
       61 ggataattta ctgccctcga tcaatcggcg gatctgttgc caggagcgcg gcggctcttg
      121 gcgcgggcat atcacttgga actgggtggc gcggacggcg tggaccgtct tcttcgcggt
      181 cttgacggcg aacctcaggg ttgaaatcgt tttcagctcc gctttgagct tggccagcgg
      241 caagccaaga tcgatcagcg cggcgacgaa catgtcgccg ctgatgccgc cgatgaggtc
      301 gccgtaggct aatcgcatgt cgtgctcgtg gctcgtgctc gtggctcgtg gctcgtggct
      361 cgtgctcgga atccctacga tcacgaacac gattctcacc actcccggtg cacttccttg
      421 ccgctggttt cgatgcggat gatttccggc ttgaaaggtt tgccgagcag ggtatcgatg
      481 agccagtcga tcaccagcgg gcgcgccttg ggatttctaa tcgagtggcg ttcgccttcg
      541 aagacgtaaa gcagcttggg cgcgggagct tcacccatta gcttgtagac gaatttcatg
      601 tcgcagtgct cgtcgtcttc gccggcgacg atcatgtagg gacaagtgat tttcgcggtg
      661 acgccttcga gggacaaaga tttgcagaat tcgtcgaagg cggcttcgtc gtcgtagccg
      721 gacatgtaca tgtagttcaa tttaaacgtc ggcgacgaca tgttgaagat cgcgaactgg
      781 cccggctcca tgcagacgcc gctgacggcg caggctttga aacgcttttc cgccgcgacc
      841 acccgggggg cccagtagga gcccatgctc gaagccatga tgccaagacg ttcggcgtca
      901 atctcagggc gggtgaccag atagtcggcg acgagtttgg cgacatcctc gacgttggac
      961 gcggtgcatt tgatgccgcc ttcacgggtc tcgccatggc cggggcagtc gacggataac
     1021 agcgcgaagc cgcgctcgat gaacggatca ccgctggcag ggtggtcttc tttgacgccg
     1081 tccatgccgg ggatatacat gacgcagggc accttctcgc cggctttgcg attaaccggt
     1141 aggtgcaaca gtgcctggac cttcttgcca tcatagggca gctcgacgcg ttcgatccgc
     1201 cttccggcat attgaatgaa cttgtcgtag gtggcgcgtt tgcgctcttg ccagtggatg
     1261 cgctcgcggt tgccgtcttc gtagatcgcc cacatggcat tggtgtagaa gcatgcggcg
     1321 atatagtagt ggtcgcgagc ttcatttaac ttgccggccg cctcggccag gcgcccctgc
     1381 tcttcgcggc gcgccgccgc ctgggagaac tcgcgcggga tatcgacgaa tttttttatt
     1441 cggctgcaca actcggtcaa atctttttcg accgtagggc cgcagttacg gatgattttc
     1501 ccggtgcggc cctggtccca gtcgatgccg cgggtttgga tcacctggtc caagatccag
     1561 cgctgttcgc gccaacgttt cattttgcgt tcggtttcaa tgcgcatggt tcgacccttc
     1621 tttgtctact gttttgaact cggattatct ctcgctaagg cgcaaaggcc gcaaaggtcg
     1681 gaaaataacg gtaaataagt cttcgagata atttgtctct tcccctccga acttggcgcg
     1741 ctttgcgtct tggcgggagt acattctttg
//
LOCUS       DATIRS010001289         1596 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_97277, whole genome shotgun sequence.
ACCESSION   DATIRS010001289 DATIRS010000000
VERSION     DATIRS010001289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1596
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97277"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..797
                     /locus_tag="VLM90_16615"
     CDS             <1..797
                     /locus_tag="VLM90_16615"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14651.1"
                     /translation="KAEGLNALVVIMQNQVVVNGVLSRHVDYGGTFSNFVGAAMSGAP
                     ARIVMSVMDGADHFLVTSPNIKRVEDLKGKTFGISSFGGTPHSEAVAILRKYGLNPEK
                     DVTFLQVGGSSARYLALESGSIQAAMIVPPFNHLAKKRGFNQILGFNDIMSMPVGGLA
                     VHTQKMKEKPDEIVKMIRALIKSLEFIRTRKPDILAIIDKHWGVKEADVREEMYREML
                     GLFSRNGIPSDEAMRNVIRLVRESRKNASEVGIADVADWSFARKAQ"
     gene            complement(901..>1596)
                     /locus_tag="VLM90_16620"
     CDS             complement(901..>1596)
                     /locus_tag="VLM90_16620"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HSQ14652.1"
                     /translation="DLRVLGASYNKFPYSFVVKPDIRSPKDLRGRKVGILNFGGSNDL
                     ALQLAFKEWGIKLNEVTILLGGDAPTRLQSLLAGRIDAAILSPPHLTRAIQTGHRVLA
                     DMGEMTANFPQSSLYVKGSLIKENRDQVKRFVRAYAEAVHVIRTDKARTQRVFTQRMR
                     MDDKEMLNTTYDYFAPRFSFPPRINMAGVRDTYSFYAEKDADLRGKTGEEFIDNSFMD
                     ELEKEGFFKKLGG"
BASE COUNT          364 a          443 c          465 g          324 t
ORIGIN      
        1 tcaaagccga ggggctgaac gcgctcgtcg tcatcatgca gaaccaggtg gtggtcaacg
       61 gtgtgctcag ccgacatgtc gattacggcg gcacgttttc caacttcgtc ggcgcggcga
      121 tgtcgggggc gccggcgcgc atcgtcatgt cggtgatgga cggcgccgat cactttctcg
      181 tgaccagccc gaatatcaaa cgcgtggaag atctaaaggg taagaccttt ggcatcagca
      241 gcttcggcgg cacgccgcac agcgaagccg tcgcgatact gcgcaagtac gggttgaacc
      301 cggaaaaaga cgtgacattc ttgcaagtcg gtggcagttc ggcgcgctat ctggcgctcg
      361 agagcggctc gattcaggcc gctatgattg tgccaccgtt caatcacctg gcgaaaaagc
      421 gcggcttcaa ccagatcttg ggtttcaacg acatcatgag catgccggtt ggcggcttgg
      481 cggtgcacac gcagaagatg aaagaaaagc cggacgagat cgtcaaaatg atccgcgctt
      541 tgatcaaaag tttggaattc atccgcaccc gcaaacccga tatcctcgcc atcatcgaca
      601 agcactgggg cgtcaaggaa gccgacgtca gagaagagat gtaccgggaa atgctcggcc
      661 tgttcagccg caacggcatc ccctcggatg aagcgatgag aaacgtcatc cgcttggtgc
      721 gcgaatcccg caagaacgcg tcggaggtcg gcattgccga tgtcgccgac tggagttttg
      781 cccgcaaggc gcagtgacgg aaacgtgttc gtgctcgtga tcgtgatcgt gatcgtaatt
      841 cagaccggcc taaaaacgaa aacgaacacg atcacgaatc acgaacacgg cttttgtttt
      901 ctagccgccg agttttttaa agaacccttc cttctccagt tcatccataa aggaattatc
      961 gatgaactct tcgccggttt tgccgcgcag atcggcatct ttctcggcgt agaaactata
     1021 ggtatcgcgc acgcccgcca tgttgatgcg cggcgggaag gaaaaacgcg gcgcgaaata
     1081 gtcgtaagtc gtattgagca tctccttgtc gtccattcgc atgcgctggg tgaagactct
     1141 ttgcgtgcgc gccttgtcgg tgcggatcac gtgaaccgct tcggcgtagg cgcgcacgaa
     1201 gcgcttgacc tggtcgcgat tttccttgat caagctcccc ttcacataaa gcgacgactg
     1261 gggaaaattg gcggtcatct cgcccatatc ggccaggacc cggtgacctg tctggatcgc
     1321 ccgagtcagg tgcggcggcg agaggatcgc ggcatcgatg cggccggcga gcaacgattg
     1381 caacctcgtc ggcgcatcac cgccgagcaa aatcgtcact tcgttgagct tgatgcccca
     1441 ttccttaaac gccaactgaa gcgccaaatc gttggagccg ccaaagttga gaatgccaac
     1501 tttgcggcca cgcaagtcct tcggcgagcg gatgtccggc ttgacgacga aggagtaagg
     1561 gaacttattg tacgaagctc cgagaacgcg caaatc
//
LOCUS       DATIRS010001290         1842 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_982451, whole genome shotgun sequence.
ACCESSION   DATIRS010001290 DATIRS010000000
VERSION     DATIRS010001290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1842)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1842)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1842
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_982451"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(77..787)
                     /locus_tag="VLM90_16625"
     CDS             complement(77..787)
                     /locus_tag="VLM90_16625"
                     /inference="COORDINATES: protein motif:HMM:NF014373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HSQ14653.1"
                     /translation="MSPVHLSDGIYFDIALRLVASLVIGGLIGLERSYHGRPAGFRTH
                     SLVCLSTSLLMLVTVYETHWFPSLSEGRISLDPTRMAQGIMTGIGFLGAGTIMKDGLS
                     VRGLTTAASIWITAAIGILIGIGFYVPAVIATVLTLGTLSVFRWIESQIPTQLYAQLL
                     VRFRRSEAMSDSEMRRLLTDHGFTVGNLTFRLDADSDSLEDQMIIRSTGEENASRLAS
                     ALNRLASVKEFRISPTGD"
     gene            complement(965..1423)
                     /locus_tag="VLM90_16630"
     CDS             complement(965..1423)
                     /locus_tag="VLM90_16630"
                     /inference="COORDINATES: protein motif:HMM:NF019032.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1499 domain-containing protein"
                     /protein_id="HSQ14654.1"
                     /translation="MNPTLRFITFVILVMPLFSCAGTRPSNLGVKDSRLAPCPSSPNC
                     VSSDDADAAHLIPSFQLAVPAADAWRAVRSTVAGLPRTKIVTETDDYLHAECSSAFFG
                     FVDDLELHLRPAQNLIAARSAARLGKSDFGVNRQRVENLRALLVKQGTIR"
     gene            complement(1437..1787)
                     /locus_tag="VLM90_16635"
     CDS             complement(1437..1787)
                     /locus_tag="VLM90_16635"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HSQ14655.1"
                     /translation="MSEHYHDENDLKLMREMRKLAPDDFNAWLGLNNIVGRENGAIPR
                     KYRELIAIAVSCATQCPYCMEAHAKAAHAAGATREEVVEASLVAAALRAGAAATHGTM
                     ALKFFDKQAEQKKE"
BASE COUNT          387 a          564 c          532 g          359 t
ORIGIN      
        1 cgtgtttcgc gtcgtactac cgcgcagtta cgacgcaaac tgaccgcctc taatccgcaa
       61 gtgtctccca acactgctaa tctccggtcg gcgagattct gaattccttc accgacgcga
      121 gacggttgag cgcgctggcc aatctactag cgttctcctc gccggtactg cgaatgatca
      181 tctggtcttc caacgaatcc gagtcagcgt caagccggaa cgtcagattg cccaccgtga
      241 aaccatgatc cgtcaacaag cgccgcattt cgctgtcgga catcgcttcg ctgcgccgga
      301 atcgcaccaa gagttgtgcg tataactgcg tcggaatttg gctttcaatc catcggaaca
      361 ccgagagcgt gcccagagtg agcacggtcg cgatgaccgc gggaacgtaa aaaccgatgc
      421 cgatcagaat gccgatcgcg gcggtgatcc agatcgacgc cgccgtggtg agcccgcgca
      481 ccgacaaacc gtccttcatg atcgtcccgg cgccaagaaa gccgatgccg gtcatgatgc
      541 cttgcgccat gcgcgtgggg tcgagggata tacggccttc agagaggctc ggaaaccaat
      601 gtgtctcata cacggtcacg agcatcagca ggctcgtgga cagacacacc agcgaatggg
      661 tgcggaatcc tgcaggccga ccatgatagc tccgctcaag tccgatcagc ccgccgatca
      721 ccagggacgc gaccagccga agtgcgatat cgaaatagat tccgtcggaa aggtgtaccg
      781 gactcatacc ggcgcgggtt cttgaatcat gaagcgatat tgcctattcg ccgaggcaat
      841 gtccatgatt tttagcaggc gaccaatctt agcacgaccc agccgcggag tcgccttcat
      901 gcttgacacg agccattcaa cgactttgca tcacggcatc gcggtcgatg tggcaagtcg
      961 aaactcacct aatcgttccc tgcttcacca gcagcgcgcg gagattttcc acccgctggc
     1021 ggttgacgcc gaagtcgctt ttgcccaggc gtgccgccga gcgcgcggcg atgaggtttt
     1081 gcgccgggcg caagtgaagc tccagatcgt cgacgaagcc gaagaacgca ctgctgcatt
     1141 ccgcatggag ataatcgtcg gtttcggtga cgatcttggt tcgcggcagg cccgcgaccg
     1201 tcgaacgaac cgcccgccaa gcgtcggccg caggcaccgc gagttgaaac gatgggatta
     1261 gatgtgcggc gtcggcgtca tcgctcgaca cgcagttggg cgacgacggg cacggcgcga
     1321 gccgagagtc tttgacgccc aaattggatg gccttgtgcc ggcgcaggag aacagcggca
     1381 tgacgaggat aacaaaggtg atgaagcgca gcgttggatt caaagacgcc gcgcgcctac
     1441 tctttcttct gctcggcctg tttgtcgaaa aacttgagcg ccatggtgcc gtgggtggcc
     1501 gcagccccag cgcgcaaagc cgccgcgact agcgaagcct cgacaacctc ttcgcgcgtg
     1561 gcgccggcgg catgcgccgc cttcgcgtgc gcctccatgc agtagggaca ttgcgtcgcg
     1621 cacgagaccg cgatggcgat caattcacgg tacttcctcg ggatcgcgcc gttctcccgg
     1681 ccgacgatgt tgttcagccc tagccacgcg ttgaaatcat ccggcgccag cttgcgcatc
     1741 tcgcgcatga gttttaaatc attctcatcg tggtagtgtt ccgacatagc aacaaacctc
     1801 ctgacgctcg ccgcattatt cctgtatttg aaatgcgaat gc
//
LOCUS       DATIRS010001291         2935 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_588918, whole genome shotgun sequence.
ACCESSION   DATIRS010001291 DATIRS010000000
VERSION     DATIRS010001291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2935)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2935)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2935
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_588918"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            278..679
                     /locus_tag="VLM90_16640"
     CDS             278..679
                     /locus_tag="VLM90_16640"
                     /inference="COORDINATES: protein motif:HMM:NF015862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HSQ14656.1"
                     /translation="MAIPGEKAIQMVRNAHTQAAQLDIAVTAVVVDQSGRMIALGRMD
                     KARPITVEIALNKGYTAASFQQQTKDLAGVANQAWFQSLVVSSSGKVMPGGGAIPVVE
                     GGNVVGAIAVSGGTDDQDQKCAEVALAAYQG"
     gene            781..2097
                     /locus_tag="VLM90_16645"
     CDS             781..2097
                     /locus_tag="VLM90_16645"
                     /inference="COORDINATES: protein motif:HMM:NF024877.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reductive dehalogenase domain-containing
                     protein"
                     /protein_id="HSQ14657.1"
                     /translation="MSKVETPNPNPNGNGGGEFPTPYLGRTVRIVGKFENVDMNQSPH
                     PKNQRGELGKPLFNWYHNTVSKDPLTRVSAPNHFADRRHFLSTVVNQAAKGKINPQKV
                     PVNDPAAMARHIKAVAHYMGADIVRIAKAHPDFLYAAGGGRYVQDGTAKDEYAAHTPE
                     QMARKFPYIIMATTAWDYNKLQAHRHLIGDAAYHISQIKGNMILKALEGYIKELGYTA
                     LRGVAVPQAVGVASGVGELGRNGLVISKEYGARVHMPDPIMTDLPLVGDEPIDIGVDD
                     FCKVCRKCANTCPTNSIPVGDKVVHNGVEKYKINWLTCYKLRPYVHDHWGSCLTCATV
                     CPYTKPKTWWHNMATSSLHYCPYVLRPVLVKFLKWVDDRFWGLVRNARVTWLGYDSGV
                     KPGEHACTVAGCNASHEKAGAKAVAGSVGYYAPLKENTNRFVKREP"
     gene            2098..2667
                     /locus_tag="VLM90_16650"
     CDS             2098..2667
                     /locus_tag="VLM90_16650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14658.1"
                     /translation="MALKFPWSGKNSHKDDPFWEFFINTPPADLTNTVTELIRNAPAG
                     NIFPHKAELHTPEITSSHVKGMAQYFGTELIGIAKLDADAPSNSSQLPFAILCAVHAD
                     YDPRQAKGIGGQMPVQNGLFITCVLSSWIRELGFRATVVRDANVDALAAKAGLGTMNG
                     SGRLVTREFGAGVYVADAIYTDLPLAADG"
BASE COUNT          661 a          885 c          830 g          559 t
ORIGIN      
        1 atttcgcgtc gtccactgcg gccgagctta gactagatcg attcaagtgc gcaacttggc
       61 ggaaggcgat tgaaattccc ggcgcgcgaa ccaccaatcc cttaggggcg tcccctgtgg
      121 tcgccccttt cagagggcag acacagggat ttgccccttg acgattcgtt gaatccagag
      181 tggaccactg ccggtatccc tttccgcttg actgcgcata cccattccct gttaaagtag
      241 ccgtaacagc ccagcaagag gaggttcccc ggcaactatg gctatacctg gagaaaaagc
      301 gattcagatg gtgcgcaatg cgcataccca agcggcgcag ttggacattg ccgtgactgc
      361 ggtggtggtc gaccagagtg ggcgcatgat cgcgctcggg cgcatggaca aagcgcggcc
      421 gatcacggta gagatcgccc tcaacaaagg ttacactgcg gcgagcttcc agcagcagac
      481 caaagatttg gccggcgtgg ccaaccaagc ctggtttcaa agtctggtgg tgtcgagcag
      541 tggcaaagta atgccgggtg gcggcgccat accggtggtc gaaggcggca acgtcgtcgg
      601 cgccatcgca gtctcgggcg gcaccgacga tcaagatcaa aaatgcgccg aagtggcgct
      661 ggcggcttat caaggatgaa gtgacagaga tgcgagacag agaccgcccc ggcgctttct
      721 taactttctt tctctgtctc tatctcatgt ctctatctga ctaaacccgg agggcaaacg
      781 atgtccaaag ttgaaactcc caaccccaac cctaacggca acggtggcgg cgagttcccg
      841 acgccctatc tcggccgcac cgtgcgcatc gtcggcaagt ttgaaaacgt cgacatgaat
      901 cagtcgccgc acccgaaaaa ccagcgcggc gaactgggca agccgttgtt caattggtac
      961 cacaacacgg tatccaaaga tccactgacc agggtatcgg cgccaaacca tttcgccgat
     1021 cgcagacatt tcttgagcac ggtggttaac caggcggcca agggcaaaat caatccgcag
     1081 aaagttccgg tgaacgaccc cgccgccatg gcgcgccata tcaaagcggt agcgcactac
     1141 atgggcgcgg atatcgtccg catcgccaag gctcatccag attttcttta tgctgccggc
     1201 ggcggccgct atgtccaaga cggcacggcc aaggacgaat acgcagccca cacgccggag
     1261 cagatggcgc gcaaatttcc ctacatcatc atggcgacca ccgcgtggga ctacaacaaa
     1321 ctgcaagcgc accgccatct gatcggcgac gccgcctatc acatctcgca aatcaagggc
     1381 aacatgatcc tgaaagccct cgaaggttac atcaaagaac tcggctacac ggcgctgcgc
     1441 ggcgtggcgg tgccccaagc ggtgggcgtg gcctcaggcg tcggcgaatt gggccgcaat
     1501 gggctggtca tcagcaagga gtacggcgcc cgcgtgcata tgccagaccc gatcatgacc
     1561 gacctgccgc tggtgggcga cgagcccatt gacatcggcg tcgacgattt ctgcaaagtc
     1621 tgccgcaagt gcgccaacac ctgcccgacc aacagcatcc ctgtcggcga caaggtcgtc
     1681 cacaacggcg tcgagaaata caagatcaac tggctcacct gctacaagct gcgcccctac
     1741 gtgcacgatc actggggcag ctgcctgacc tgcgctacgg tgtgtcccta caccaaaccg
     1801 aaaacctggt ggcacaatat ggcgacgtcg tcattgcact attgccccta tgtcctgcgg
     1861 ccggtgctgg tgaagtttct caaatgggtc gatgaccgat tctggggttt ggtgcgtaac
     1921 gcgcgggtga cttggctggg ctacgactcc ggcgtcaaac ccggcgagca tgcctgcact
     1981 gtcgccggct gcaacgcgtc ccatgagaaa gccggcgcca aagccgttgc cggcagcgtc
     2041 ggctactatg cgccgcttaa ggaaaacact aaccgattcg tcaagcggga accgtaagtg
     2101 gctttgaagt ttccctggtc cggcaagaac tctcataagg acgatccctt ctgggagttt
     2161 ttcatcaata cgccgcccgc cgatctcact aatacggtga cggaactgat ccgcaacgca
     2221 ccggcgggga atatttttcc ccataaagca gagctgcaca cgcccgagat cacttccagt
     2281 catgtcaaag gcatggcgca gtacttcggc acggagctga tcggcatcgc caagcttgac
     2341 gccgatgcgc caagcaactc gagccaactg ccgttcgcca tactatgcgc cgtccatgcc
     2401 gactacgacc cgcgccaagc caaaggcatt ggcggccaga tgccggtgca aaacggcctg
     2461 ttcatcactt gtgtcttgag ttcatggatt cgcgaattgg ggtttcgcgc cactgtggtg
     2521 cgcgacgcca acgtcgacgc gctggcggcc aaagcaggct tgggaacgat gaatggcagc
     2581 ggcagattgg tgactcgcga attcggcgcc ggtgtttacg tcgccgatgc gatctacacc
     2641 gatctgccgc tagccgcgga cggctaggcc ttcagccatt ccagattaca aatttcagat
     2701 ttcaaattgc cggtctgaac tctggaatat gtaatttgga atctggaatt aggtatttcg
     2761 agcgaagcga ggaccccgtg ccctacatca tcaccgaact ttgtaccaat gacggcgcct
     2821 gcgtcgaagt ttgtccggta gcttgcatcc acaccaaacc gggcgcgtcg caattctacg
     2881 tcgacccgga agtctgcatc gactgcgagc agtgcgagat cgtctgcccg gtgga
//
LOCUS       DATIRS010001292         1600 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_589072, whole genome shotgun sequence.
ACCESSION   DATIRS010001292 DATIRS010000000
VERSION     DATIRS010001292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_589072"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(485..925)
                     /locus_tag="VLM90_16655"
     CDS             complement(485..925)
                     /locus_tag="VLM90_16655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14659.1"
                     /translation="MIGNERFLHCRRCNEVHRVTPFDQAPIYELQGSNMREIPTDDRR
                     QFMERHAGHAIEELASVDEDWLKPQSAIDPMAESYVFVANERYFFLLQRSRRSITDPI
                     VYQVMPRQLLPSALNLEALSQWRRSLRAHWLLSKARLRRKLVGG"
     gene            complement(1058..>1600)
                     /locus_tag="VLM90_16660"
     CDS             complement(1058..>1600)
                     /locus_tag="VLM90_16660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14660.1"
                     /translation="VIIENCNVCHLTLATHGEARRNAEFCVMCHNPSNTDEDKRKAAK
                     GPLPPENIHYKRLIHRIHTGAAAVESLIIYGGPPVKPGPIEMGDVRFPGDRRNCVKCH
                     VPGANEPPLPAGLLPTLIPQKDGTVKAIQPITSACIACHTKEPAKIHMDTMTNINGQE
                     ACVTCHGVGRAFAVEKVHRR"
BASE COUNT          312 a          461 c          467 g          360 t
ORIGIN      
        1 aaggtgcgga cggctacctc ctgcggcagc gcgccgtcat tcgccgcaac gaagagctgg
       61 tcaacctcga agaacgcaat gactacacgg tctattgcga cgacgaagac tgcaaataac
      121 agcctggcaa gcggccgtcg ccgctgcaat gtttcatcgt ctccagcgat ttctgcaggc
      181 tcagccagtt gaagcggcta gccgccaagt cggaagccgc gcttgacgac cgcgagatgg
      241 actcgcgcgc gacctgcgat ctgagcggca agtttccgat cagagttttt tccgccgcca
      301 tccaacaaat ccaatatgtt ttcctgatcc atagcaaagc atccaactcg ccaagctgca
      361 aagagttgcc acacggtgaa tcccgtgcgc acgcgcatgc cggtgttcgc ttccgctctg
      421 tggcgaataa ggttattttt tagcgtgccg attcggctgg agtaaagagc gtgagctaat
      481 tgagctagcc gccaaccaac ttgcggcgta gccgagcttt gctaagcagc caatgggcgc
      541 gcaggctgcg ccgccactgg ctcagcgcct cgagattgag ggccgagggc aaaagttggc
      601 gcggcattac ctggtagacg atcgggtcgg tgatgctgcg gcgcgagcgc tgcaggagga
      661 aaaagtagcg ctcgttggca acaaaaacgt agctctcggc catcggatcg atggcgcttt
      721 gcggcttcaa ccaatcttca tccacgctcg ctagctcttc gatggcatga cccgcgtgcc
      781 gttccatgaa ttggcgccgg tcatccgtcg ggatctcgcg catgtttgag ccttgcagtt
      841 cgtagatcgg cgcttgatcg aagggcgtga ccctgtgcac ttcgttgcac ctgcggcagt
      901 gtaggaagcg ctcgttacct atcataattt ggtaacctac actcatcggt ttaagattta
      961 gccgcgcgaa cttcagtaaa gctactcccc tcgcaatcga actggcattg ttttctcgtc
     1021 gagtcgctag cgcacgccgt gcctgtccgt aacgcggcta tctccgatgt actttctcaa
     1081 cagcaaaggc gcggccgacg ccatggcagg tgacgcaggc ttcttggccg tttatgttgg
     1141 tcatcgtgtc catgtgaatt ttcgccggct ccttggtgtg acaagcgatg caggcgctgg
     1201 tgatgggctg gatcgccttc acggtgccat ccttttgcgg gatcagtgtc ggcaaaagtc
     1261 ccgccggcaa tggcggctcg ttcgctccgg gcacatggca cttcacgcag ttgcgccggt
     1321 cgccgggaaa acgcacgtcg cccatttcga tggggcccgg cttcaccggc ggaccgccgt
     1381 agatgattag ggactcgacc gcagccgcac cggtatgaat tcgatgaatc agccgcttgt
     1441 agtgaatgtt ttccggtggc agcggtccct tagccgcttt gcgtttgtcc tcgtcggtat
     1501 tggatgggtt gtggcacatg acgcagaact cggcgttgcg ccgtgcttcg ccatgagtcg
     1561 ccaacgtcaa atggcagacg ttgcagtttt caattatcac
//
LOCUS       DATIRS010001293         1527 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_589089, whole genome shotgun sequence.
ACCESSION   DATIRS010001293 DATIRS010000000
VERSION     DATIRS010001293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_589089"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..690
                     /locus_tag="VLM90_16665"
     CDS             <1..690
                     /locus_tag="VLM90_16665"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HSQ14661.1"
                     /translation="VRQDAPAYAERLNENLKGLRVGVLRKFLAGVDGPVREAFLAALK
                     VFAEAGCEIIDLDVAELSYAAMTSMLISSAESAGINRRWFRERAQDYVPHVARGIAVG
                     MAITASEYLTAQRARHRIREAVRAAYDKVDIIAAPTTARGAPLLAQGVQGNGDDSRHA
                     SYNQSNLLRFPSMLGLPGCSLPCGMDADGLPSGMQLIGAWFADQTVLNTAAAYQSATA
                     WHDRKPALVGA"
     gene            876..>1527
                     /locus_tag="VLM90_16670"
     CDS             876..>1527
                     /locus_tag="VLM90_16670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14662.1"
                     /translation="MSTVEPKGAVHWIDHYVVGTNDLPGWSYWALNATGLPIRPINGL
                     TTNMRKKNTPIFCFMWWDDESCRIGAFLQPENYPKAKELGKDMPRCGFYIRPADIESH
                     LKRLDRHKIPHTDPVKTAEGGEEGTVICFADPDGNQYEFWAPEKMPEGAMEVISPEKV
                     GRISHCVYGSRDLARTAGFFEKYCGMESERSAKTPEGTLVLRMRAGARLIYKLVDQL"
BASE COUNT          324 a          497 c          426 g          280 t
ORIGIN      
        1 gtgcgccagg acgcgccggc ctacgccgag cgcttgaatg aaaacctcaa aggcctgcgc
       61 gtcggcgtgc tgcgcaaatt cctcgccggc gtcgatggcc cggtgcgcga ggcgtttctc
      121 gccgcgctca aagtcttcgc cgaagccggc tgtgagatta tcgacctcga tgttgccgaa
      181 ctcagctatg cggcgatgac ttccatgctc atcagctcgg ccgagagcgc cggcatcaat
      241 cgccgctggt ttcgcgaacg cgcccaagac tatgtccccc atgtcgcccg cggcatcgcc
      301 gtcggcatgg cgatcaccgc ttcggaatac ctcacggccc agcgcgcccg ccaccgcatc
      361 cgcgaagcgg tcagagctgc ctacgacaag gtcgatatca tcgccgcgcc gaccaccgcg
      421 cgcggggcgc cgttgctggc gcaaggcgtc cagggcaacg gcgacgactc gcgccacgcg
      481 agctacaatc agtctaattt actgcgcttc ccgagtatgc tcggcctacc cggctgctcg
      541 cttccctgcg gcatggatgc cgacggcctg ccgagtggca tgcaactgat cggcgcatgg
      601 ttcgccgatc aaaccgtctt aaacaccgcc gccgcgtacc aaagcgcgac ggcctggcac
      661 gaccgcaaac cggcattggt gggggcgtaa aatttttcgc ccaactagcc gcaatatccc
      721 gcttggaccc ttggccgaat cgaatcaaaa acggcatgaa cgttttgacc aattggaaca
      781 cactagttgt aagttatccc cttgacgccc gcaccacggt ctgttacccc aagcacaata
      841 tagcggtcat cacgtttcct actggaggat ttcccatgtc aaccgtcgaa cccaaaggcg
      901 cagttcactg gatcgatcac tatgtcgtcg gcaccaacga tttaccgggt tggagttact
      961 gggcgcttaa cgccaccggc ctaccgatcc ggccgatcaa tggactgacc accaacatgc
     1021 gcaagaaaaa cacgccgatc ttttgcttta tgtggtggga cgacgaatcc tgccgcatcg
     1081 gcgccttcct ccagccggag aactatccga aggcgaagga gcttggcaaa gatatgccgc
     1141 gctgcggctt ttacatccgc cctgcggata tcgaatcgca tctcaaacga ctcgaccggc
     1201 ataaaatccc ccacaccgat ccggtcaaaa cagctgaagg cggcgaggaa ggcaccgtga
     1261 tctgctttgc cgacccagac ggcaatcagt atgaattctg ggcgccggag aaaatgcccg
     1321 agggcgcaat ggaagtcatc tcgccggaaa aagtcggccg catcagccac tgcgtctacg
     1381 ggtcgcgcga tctcgccaga accgcgggct ttttcgagaa atattgcggc atggaatccg
     1441 agcgcagcgc caagactccc gaggggacgc tcgttttgcg catgcgcgca ggcgcccggt
     1501 tgatttacaa gctagtcgat cagctcg
//
LOCUS       DATIRS010001294         2144 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_1964063, whole genome shotgun sequence.
ACCESSION   DATIRS010001294 DATIRS010000000
VERSION     DATIRS010001294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2144
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1964063"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            126..1961
                     /gene="typA"
                     /locus_tag="VLM90_16675"
     CDS             126..1961
                     /gene="typA"
                     /locus_tag="VLM90_16675"
                     /inference="COORDINATES: protein motif:HMM:TIGR01394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HSQ14663.1"
                     /translation="MTQSQLTRRDDLRNIAIIAHVDHGKTTLVDALLHQSGIFRANEH
                     VAERIMDSMDLERERGITIMAKNTTIHYAKVQINIVDTPGHADFGGEVERTLAMVDGV
                     MLLVDASEGPLPQTRFVLKKALEAKLTPIVCINKIDRADARIAVVLDEIYDLFIDLDA
                     SEDQLDFPVVYTNARAGTATLDLKQPGENLKPMFELIVNTLPGPSYDPAMPTQFQANN
                     LDYNDYVGRLAVGRVKNGTLTPGQFLLCRVGGKQEVVKITQVYGWQGLKRVEVASVRA
                     GDIAAIAGIEDIGIGDTITDREKPQALPPLRIDEPTIAMLFCANNSPWSGREGEHVTS
                     RKLRERLFFEARRNVSLRVEETAQPDAFQVTGRGEFALAIVIETMRREGYEMMVSKPT
                     VITREIGGVIHEPMELLVIDIPEDFIGVVSQLLAMRKGKMTKMIHAGTSRVRLEFAVP
                     SRGLIGFRSRFLTDTRGTGIMNALFNGWEPWHGMIQSRTNAAMVADREGSAPPYAIYH
                     LQERGVMFIAPGTKVYEGMVVGEYSRENDLNVNVCKEKKLTNMRASGKDENIIISPHR
                     EMGLEAGLEWISDDELVEVTPQSIRLRKKILKQADRPRRRHEEED"
BASE COUNT          484 a          676 c          585 g          399 t
ORIGIN      
        1 tgtaatccct aaaaatactc tacgccctgg gtaatcgcaa ggtaaacaaa gtcaacgctc
       61 gagaattgcg gacattttcg ccgctcgctt gacttcggag gaggcaactt tgatactcat
      121 cggttatgac tcaatctcaa ctcacccgcc gcgacgatct gcgcaacatc gcgatcatcg
      181 cccacgtcga tcacggcaag accactctgg tcgacgcctt gctgcaccag agcggtattt
      241 tccgcgccaa cgagcatgtc gccgagcgca tcatggattc catggatctc gagcgcgaac
      301 gcggcatcac gatcatggcg aagaatacca cgatccatta cgccaaggtc cagatcaaca
      361 tcgtcgacac tcccggccat gccgactttg gcggcgaagt ggaacgcacc ttggcgatgg
      421 tcgacggcgt catgctgctg gtcgacgcct cggaagggcc gctgccgcag acccgctttg
      481 tattgaagaa agcgcttgaa gccaaactca caccgatcgt ctgcatcaat aagatcgacc
      541 gggccgacgc gcgtatcgcc gtggtgctcg atgaaattta tgacctgttc atcgatctcg
      601 acgccagcga agaccagctc gatttcccgg tggtctatac caacgcccgc gccggcaccg
      661 cgacactcga tttgaaacaa cccggtgaaa atttgaagcc gatgttcgag ctgatcgtca
      721 acacactgcc cggcccaagc tatgacccgg cgatgccgac gcaattccaa gccaacaatc
      781 tcgattacaa cgactatgtc ggccggctcg ccgtcggccg agtgaaaaac ggcacgctca
      841 cgcccgggca atttttgctt tgccgcgtcg gcggcaagca agaggtagtc aagatcaccc
      901 aggtctatgg ctggcagggg ctcaaacgcg tcgaagtcgc atccgtgcga gccggcgaca
      961 tcgccgccat cgccggcatc gaggacatcg gcatcggtga taccatcacc gaccgcgaaa
     1021 aacctcaggc gctgccgccg ctgcgcatcg acgaaccgac catcgccatg ctgttctgcg
     1081 ccaataattc accctggtcc ggccgcgaag gcgaacatgt cacctcgcgc aagctgcgcg
     1141 aacgattgtt cttcgaagct cggcgcaacg tcagtctgcg ggtcgaggaa accgcccagc
     1201 cggatgcctt tcaagtcacc ggccgcggcg aattcgccct ggccatcgtc atcgagacca
     1261 tgcgccgcga aggctacgag atgatggtct ccaagcccac cgtcatcacc cgcgaaatcg
     1321 gcggcgtgat ccatgaaccg atggaactct tggtgatcga tattcccgag gattttatcg
     1381 gcgtggtgtc gcagctgctg gccatgcgca agggtaagat gaccaagatg atccacgccg
     1441 gcaccagccg cgtgcgtttg gaattcgccg tgccgtcgcg cggcctgatc ggctttcgct
     1501 cgcgctttct caccgacacc cgcggcaccg gcatcatgaa cgccctgttc aacggctggg
     1561 aaccctggca tggcatgatt caatcgcgca ccaacgccgc gatggtcgcc gaccgcgaag
     1621 gctccgcccc gccctacgcg atttatcact tgcaagaacg cggcgtcatg ttcatcgcgc
     1681 cgggcaccaa agtctacgaa ggcatggtgg tcggcgagta ctcgcgtgaa aatgacttga
     1741 acgtcaacgt ctgcaaagag aaaaagctca ccaacatgcg cgcatcgggc aaggacgaaa
     1801 acatcatcat ctcgccgcac cgcgagatgg ggctggaagc cggcttggaa tggatctctg
     1861 acgatgagtt ggtcgaagtc acgccgcagt ccatcagact gcgcaagaag attctcaaac
     1921 aagccgaccg gccacgccgg cgccacgagg aggaagatta gcctgtataa gtcaacatgg
     1981 cgcttcagcg gccagcgaca cgcgtcgcgg ctgagcggcc ttcctgttac ggctgtaatc
     2041 aaactgcatt gcccatcaac tgaatcctaa ggtcctgtgc tgcccaaggt cggttcggaa
     2101 actgtcgccg tcacagcgtc ctgacatacc ttttagcggt ttaa
//
LOCUS       DATIRS010001295         3031 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_589428, whole genome shotgun sequence.
ACCESSION   DATIRS010001295 DATIRS010000000
VERSION     DATIRS010001295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 3031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3031
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_589428"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..508
                     /locus_tag="VLM90_16680"
     CDS             <1..508
                     /locus_tag="VLM90_16680"
                     /inference="COORDINATES: protein motif:HMM:NF023044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="type II secretion system protein GspJ"
                     /protein_id="HSQ14664.1"
                     /translation="VEKSAASFNRNQKTRSIGDLLATYIRSAYPYRKSIQEQAIFFDG
                     GHESVTFVSAYSHAMGGRGMAKIAIVKDEADNGRALVRLAETAPVRVGDDAGDGGQSH
                     SLVILEGIRDFQLAYLDAEGEKENWEERWDGNERRRLPRALRMTFIDAEGKEVRWVFP
                     FMLAVLSQ"
     gene            517..1521
                     /locus_tag="VLM90_16685"
     CDS             517..1521
                     /locus_tag="VLM90_16685"
                     /inference="COORDINATES: protein motif:HMM:NF045433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14665.1"
                     /translation="MAISANPLLGNQRGVALIVVLWMFIFLFVVAFDFSASVREEAEA
                     THRFSDETQGYYLAVAGFERGLYDFIHQASGGNRQADPAKVDLFDGSWREEKLGSGGF
                     RVRLVDEGGKINLNRVNEQVLRRVFTNLGVDDSVVDILVDSIMDWRDPDELHRTNGAE
                     SDYYGLLSPAYSAKNGPLDSVEDLLWIRGMTPALYYGSADDSDARSERSPRVGLREVF
                     TIDSPIDRVNLRTATAQVIHAMTGIPVEKCRSFVEERKRLSEKTLTDLLPLLGIGSGD
                     PVLQSFIFTNPSVVAVDAEGRPTDARAARRVKGVVRLGGAQGFEMLRWLDREIGLSQP
                     "
     gene            1572..>3031
                     /locus_tag="VLM90_16690"
     CDS             1572..>3031
                     /locus_tag="VLM90_16690"
                     /inference="COORDINATES: protein motif:HMM:NF022554.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspL"
                     /protein_id="HSQ14666.1"
                     /translation="MAIGQRLQDLSRADFLRSVGLYVMQDRLVMVRLRKSLLNVALLD
                     QQDRELPHSDTRPAIADITGWVAEDVKEIALKAENDSRERSLRQAMVSLLPHFNAGRD
                     AVYLCIPQDQVIMQQIFLPLAAQDTIEQVLQYEIERQMPFRRDEIYYDYLATGKKGER
                     LSLYVIAVQKKIVDGLVSLLESFGIKPAGVEPDVTALLNYALYATGPNNSRTAILAAS
                     EHSWDLLGVESKATNWSASQQFLFAHRMPHSEWAQGAGRELLLQNLADVDKCYRWGNL
                     GDMTGLPAEKFAAAEELQGLDGHRFRGLKSPLPEAALPAVGAALRGIREAAVIGNFLR
                     HENPEPAGGNSLSMLNAVLGGLLALALVAWGLSYPIKDEMRLRQLQRENQKFEAAIEA
                     LRREENQLQQLSKEVGTLAELQGRRGEVLKILDELSKVVPNNAHLSNLRYRAGVLEVQ
                     GNAENASALIPLLERSPVFENVAFNAPSNRGRDNRET"
BASE COUNT          602 a          854 c          939 g          636 t
ORIGIN      
        1 ggtagaaaaa tccgcggcga gttttaatcg caaccaaaag acccgttcca tcggcgacct
       61 gctggcgacc tatatccgat ccgcttaccc ctaccgcaag tcgattcaag agcaagcgat
      121 ttttttcgac ggcgggcacg aaagtgtgac tttcgtatcg gcctattccc acgccatggg
      181 cggccgcggc atggccaaga tcgctatagt aaaggacgag gctgacaacg gccgcgcgct
      241 ggtacgcctg gcggagactg cgccggttcg ggtcggcgac gatgccggtg acggcgggca
      301 aagccatagc ttggtcattc tcgaaggcat ccgcgatttc cagctcgctt atctcgatgc
      361 cgagggggaa aaggaaaact gggaagagcg ctgggacggc aatgagcggc gccgcctgcc
      421 gcgcgctctg cgcatgacct ttatcgacgc cgagggcaaa gaggtgcgct gggtattccc
      481 cttcatgttg gcggtgcttt cccaatgaag ccggtcatgg caattagcgc caatccattg
      541 ctcggcaacc aacgcggcgt ggcgctgatc gtggttttgt ggatgtttat ttttctcttc
      601 gtcgtcgctt tcgactttag cgcctcggtg cgtgaagaag cggaggcgac ccatcgtttc
      661 agcgatgaga cccaaggtta ttaccttgcc gtagcaggtt ttgagcgcgg cttgtacgat
      721 ttcatccatc aggccagcgg cggcaatcgg caggccgatc ctgcgaaggt cgatttgttt
      781 gacggtagtt ggcgcgagga gaagcttggc agcggcgggt ttcgtgtgcg gctggtcgac
      841 gagggcggta agatcaacct caatcgcgtc aacgaacagg ttttacgccg ggtattcacc
      901 aatctcgggg tggacgactc ggtggtggac attcttgtcg attcgattat ggactggcgc
      961 gatcccgacg agctgcaccg caccaacggc gccgaaagcg attattatgg gttactgtca
     1021 ccggcctatt cggcgaagaa cggtcccctc gatagcgtcg aggatctctt gtggattcgc
     1081 ggtatgacgc cagcgctcta ttatggctcc gcggacgaca gcgatgcacg gtcggagcgc
     1141 tcgccgcggg tcggtttgcg cgaggtcttc accatcgaca gtcccatcga ccgggtcaac
     1201 ctgcgtaccg cgacggcgca ggtgattcac gccatgaccg gtattccggt ggagaaatgc
     1261 cgcagcttcg tcgaggaacg caaacgttta tcggaaaaaa ccttgaccga tttgctgccc
     1321 ctcctgggta ttggatcggg tgacccggtg ttgcagtcgt ttatttttac caacccatcg
     1381 gtggtcgccg tcgacgccga aggccggcca accgatgccc gcgcggcgcg ccgggtcaaa
     1441 ggggtggtcc ggctcggcgg cgcccaaggc ttcgagatgc tccgttggct cgatcgggaa
     1501 attggactat cgcaaccttg agctttaatg taaaatgggt tcgttaacat cattttgaac
     1561 cgcgaataca tatggctata gggcagcgct tacaagatct ttcgcgcgcc gactttctca
     1621 gaagcgtcgg gctttacgtc atgcaggacc gtctggtgat ggtgcgcctg cgtaagagct
     1681 tgctcaacgt agcgctgctc gaccagcagg accgagagtt gccacacagc gacacgcggc
     1741 cggcgatcgc cgatatcacc ggctgggttg ccgaagacgt taaggagatc gcacttaagg
     1801 ccgagaacga ttcgcgcgag cgcagtctgc gccaggcgat ggtttctcta ttgccccatt
     1861 ttaatgccgg gcgcgacgcg gtttatctgt gtattccgca agaccaggtg atcatgcagc
     1921 agatcttcct gccgctggcg gcgcaggata ccatcgagca agttttgcag tacgagatcg
     1981 agcggcagat gccctttcgc cgcgatgaaa tctattacga ctatctcgcc accggcaaaa
     2041 aaggcgagag gttgagcctt tacgtcattg ccgtgcagaa aaagatcgtt gacggcctgg
     2101 tgagtttgct ggagtccttc ggcatcaagc ccgccggcgt cgagcccgac gtcacggcgc
     2161 tgctcaatta cgcgctttat gccactggcc ccaataactc ccgtacggcg attttagcgg
     2221 cgagcgagca tagctgggac ctcctcgggg tcgagtccaa ggcgacgaat tggagcgctt
     2281 cgcagcaatt cttgttcgca caccgcatgc cccattcaga atgggcccag ggtgcgggcc
     2341 gagagttgct gctacagaat ctcgccgatg tcgacaagtg ctatcgctgg ggtaatctcg
     2401 gcgacatgac agggctgccg gcggaaaaat tcgctgccgc cgaggagctg caaggcttgg
     2461 acgggcaccg cttccgcggc ctaaaatcgc ccctccctga ggcggcactg cccgctgttg
     2521 gcgccgcgct gcgcgggatt cgtgaagccg cggtgatcgg caattttctg cgtcatgaaa
     2581 accccgaacc ggcgggtggt aattcgctgt ccatgctcaa tgccgtcctg ggtgggctgt
     2641 tagcgctcgc gctggtcgcc tgggggctca gttatccgat caaggatgag atgcgcctgc
     2701 gtcagttgca gcgcgagaac cagaagttcg aggcggccat cgaagccctg cgccgcgaag
     2761 agaatcagtt acagcaactg agcaaagagg tcggcacttt ggccgaactg cagggtcggc
     2821 gcggcgaggt actcaaaatc ctcgacgaac tgtcgaaagt cgtgcccaac aacgctcatc
     2881 tttccaatct gcgttaccgg gccggtgtct tagaggtcca gggcaacgcg gaaaatgcct
     2941 ccgcgttgat tccgttgttg gagcgctcac cggtgttcga gaatgtcgcg ttcaatgcgc
     3001 cgtcgaaccg tggccgggac aaccgcgaaa c
//
LOCUS       DATIRS010001296         2061 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_589758, whole genome shotgun sequence.
ACCESSION   DATIRS010001296 DATIRS010000000
VERSION     DATIRS010001296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2061
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_589758"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..277)
                     /locus_tag="VLM90_16695"
     CDS             complement(<1..277)
                     /locus_tag="VLM90_16695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HSQ14667.1"
                     /translation="MKTVGCLAIFVLSLCQVVSLQAQTIDEVYKRALAEGGTLNFYAT
                     LAQINAEIILPAFEKRFPGLKVNHVDATADQLAARIIAESRGGRILAD"
     gene            complement(375..1820)
                     /locus_tag="VLM90_16700"
     CDS             complement(375..1820)
                     /locus_tag="VLM90_16700"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HSQ14668.1"
                     /translation="MPKSLSTFLDECRREIPNEVVHIGKTIDPAHYDATAVIKHLGAQ
                     KKFPIAIFDRPLNLHGQVSDFPLVLNCEISQRKTQIALGMPRSLTRSEMAEACLAREA
                     KPIPPIGIDTKDAPVKRNIKRGADVDLFQLPFMRHYEMDGGPYSTLSTIAKDRKSGIY
                     NCSYHRMEIKSPNRTALYASPRHLWRMYRDYEEQNMECPVATVMGHHPAYHIGACYTG
                     PFEVSEFDIIGGYLQEPLRLTPSATWGDDLLIPADAEIVIEGALIPGKRVVEGPFGEA
                     PGYLGPQRYVRCVEYEVRAINYRNGAMYQSVITPEGDKPWMDLPREGAYLRRCREAVP
                     GVTAVCKLGRQANYNIFIAMKKMSEGDPGRAAAAALTFDHAKNVFVFDDDIDVFNPTD
                     VLWAIATRVQPHLQVSITPPIFRGNMLDPSLNNEIKTSCMIVDATKPLDRPFSPVSKC
                     PDEAMARIKLEDFVPGEILQHIPIDRTTYWA"
BASE COUNT          424 a          601 c          576 g          460 t
ORIGIN      
        1 cgtcggcgag tatccgtccg ccgcgcgatt ccgcgatgat ccgcgccgcc aactgatccg
       61 ccgtcgcgtc gacatggttc actttgagac cgggaaaacg cttctcgaac gccggcaaaa
      121 tgatctcggc attgatctgc gccaaggtag cgtagaaatt cagtgtgccg ccttcggcga
      181 gcgcccgctt ataaacttcg tcgatagttt gcgcctgtaa cgaaacgact tggcacagcg
      241 ataaaacaaa aattgccaga caaccaactg ttttcataac gtctctcctt ctcgcctttc
      301 cgataccgat aaacgttttg aacggcttga acgattggaa cgactggaac aagcgccatc
      361 tttggcgctg atgttcacgc ccaatacgtc gtccgatcga tggggatatg ctgcaaaatt
      421 tctcccggca cgaagtcttc cagcttgatt cgcgccatcg cctcgtcggg gcatttcgac
      481 accggcgaga acggccggtc gagcggcttg gtggcgtcga cgatcatgca ggaagtcttg
      541 atctcgttgt tgagcgacgg atcgagcatg ttgccgcgga aaatcggcgg cgtgatcgag
      601 acttgcaggt gcggctgcac gcgggtcgcg atcgcccaca agacatcggt cggattaaaa
      661 acgtcaatat cgtcgtcgaa gacgaaaaca tttttcgcgt gatcgaaggt caacgccgcc
      721 gccgcggccc ggcctggatc gccttcggac atttttttca tggcaatgaa aatattgtag
      781 ttcgcctgcc ggccgagctt gcacaccgcc gtgacgcccg gcaccgcttc gcggcagcgc
      841 cgcaaatacg cgccctcgcg cggcagatcc atccacggct tatcgccctc cggcgtaatg
      901 accgactggt acatggcgcc gttacgataa ttaatcgccc gcacttcgta ctcgacacaa
      961 cggacatagc gctgcggccc gagataaccg ggcgcttcgc cgaacggccc ttcgacgacc
     1021 cgcttgccgg ggatcaacgc gccttcgatg acgatctcgg catcggcggg aatcagcaag
     1081 tcgtcgcccc aggtcgccga tggagtcagc cgcagcggct cttgcagata accgccgatg
     1141 atatcgaact cgctgacctc gaacggcccg gtgtagcaag cgccaatgtg ataggccgga
     1201 tgatggccca tcactgtggc caccggacac tccatatttt gctcttcgta gtcgcggtac
     1261 atgcgccaga gatggcgcgg cgaggcgtac agcgcggtgc ggttcggtga cttgatctcc
     1321 atgcggtggt acgagcagtt gtaaataccg ctcttgcggt ctttggcgat ggtcgacagc
     1381 gtgctatagg gaccaccgtc catctcgtag tggcgcatga acggcagctg aaacagatcg
     1441 acatcggcgc cgcgtttgat gttccgcttc accggcgcgt ctttcgtgtc gatgccgatc
     1501 ggcggaattg gcttggcttc ccttgccagg caggcttcag ccatctcact gcgcgtcaag
     1561 ctgcgcggca tgccgagtgc gatctgggtc tttcgctgcg aaatttcgca attgagcaca
     1621 agcgggaagt cgctcacctg gccatgcaaa ttgagcggcc tatcgaagat cgcgatggga
     1681 aactttttct gcgcgccgag gtgcttgatg accgccgtcg cgtcataatg cgccggatcg
     1741 atggtcttgc cgatgtgaac gacttcgtta ggaatctccc ggcgacactc atcgagaaac
     1801 gtgctcaagc tcttcggcat ggaatctcca ggggatcaat gaatcatagt ttcaccacga
     1861 agacacgaag gacacgaagg attcggatga acaatactcc aaacttcgtg ctcttcgtgt
     1921 ccttcgtggt aaaaattctt tcccatgtgg ttctttactt cgccgggtaa cgcttggcca
     1981 tttcgttgaa gaagccttcc ttttctagct cctgcaagaa acttaggtcg acgaactgtt
     2041 tcggtttcgc cgtcttggcc t
//
LOCUS       DATIRS010001297         2268 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_196112, whole genome shotgun sequence.
ACCESSION   DATIRS010001297 DATIRS010000000
VERSION     DATIRS010001297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 2268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2268
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196112"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..497)
                     /locus_tag="VLM90_16705"
     CDS             complement(<1..497)
                     /locus_tag="VLM90_16705"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HSQ14669.1"
                     /translation="MFAQLRHMAIVTSNVNHEGDFYHDIFGMKRSGVTRAGGAVVCHD
                     GYVGLNLNPRAPGRQAGFDHFGFEVQDTEVVFARLKDKYPQIQVLHRPSNRPFAGISM
                     HDPNGNVFDLSQLNMENRKDLYTDKIEERKRRVGHIGLRCVDADLCGEFYRDVFELQE
                     LEKPNG"
     gene            complement(668..2131)
                     /locus_tag="VLM90_16710"
     CDS             complement(668..2131)
                     /locus_tag="VLM90_16710"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HSQ14670.1"
                     /translation="MAKMFIGGESVDSVTKNTSEVRNPATGATVDTVPQGNDKDVQQA
                     ISAAEDAFKVWADVSPEDRGNALMNAGELIKKNTAEIAQLLTQEQGKTLFEAGLEIHH
                     LVHGLEFYAGLASKVRGSHVPLPQKNAYGMVVRQPIGVCGGIVPWNFPLTLMGTKLGP
                     ALAAGNTIIIKPASTTPLATIKVIELIAQATFGEGKAQKPLPKGTVNIVTGPGGSVGE
                     ELLRNPRVRRIAFTGSTPIGRHVMEVAGREIKRVTLELGGSDPMIVMEDSNVDLAVKM
                     ADVGRYFNCGQMCLGVKRLFLQESIADNFIGALVEILKKKTVGNGMSKETRMGPIHVG
                     AQRQEVEEQVEDAKARGGKVLFGGERPKGAEFDNGFYYLPTLMTNVPEDSRLTKEEVF
                     GPALPVYTFKTLDEALEKANASEFGLGSSIWTRNLLHANKAIDKLQAGNVWVNSLHYG
                     YDELPFGGVKSSGVGREHGPEALDYYLEPKGVVVVNI"
BASE COUNT          441 a          625 c          659 g          543 t
ORIGIN      
        1 ccgttgggtt tttccagttc ctgcaattca aatacatcgc gataaaactc gccgcagaga
       61 tcggcgtcga cgcagcgcag gccgatatgg ccgacgcgcc gtttgcgctc ttcgattttg
      121 tcggtataga ggtccttgcg gttttccatg ttgagctggg acagatcgaa aacattgccg
      181 ttgggatcgt gcatgctgat gccggcgaag gggcggttgc tcggccgatg cagcacttgg
      241 atttgaggat acttgtcttt aagccgggcg aagacgacct cggtgtcttg gacctcgaag
      301 ccgaaatgat cgaagccggc ctgtcgtccc ggcgcgcgcg gattcagatt caacccgacg
      361 tagccgtcgt ggcagaccac cgcgccgccc gcgcgcgtga cacccgaccg tttcatgcca
      421 aaaatatcat ggtaaaaatc accttcatga ttgacgttgc tggtgacgat ggccatgtgt
      481 ctcaattgtg cgaacatagc gggctccttt tgtgcgggtt agactgccgc taccctagtt
      541 gaagcgtgag caacttgtca accgcaaaca aactggagtg atggagtatt ggagtggtgg
      601 agtgatgggt ggaatccgaa aacccaatac tccgtaactc caacactcca gtactccaat
      661 tctttcgtca gatgttgacg acgaccacgc ccttgggctc gaggtaatag tcgagcgctt
      721 cggggccatg ctcgcggccg acgccgctgg atttcacgcc gccgaagggc agttcgtcgt
      781 agccgtaatg cagtgaattg acccacacgt tgccggcttg gagcttgtcg atagctttgt
      841 tggcgtgcag caagttgcgc gtccagatcg atgagccgag gccaaactcg gacgcgttgg
      901 ctttctccag ggcttcgtcg agagtcttga aggtgtagac tggcagcgcc ggaccgaaga
      961 cctcttcttt ggtcaggcgc gagtcctctg gcacgttggt catgagggtc ggcagatagt
     1021 aaaagccgtt gtcgaactcg gcgcccttgg ggcgctcacc gccgaagagg accttgccgc
     1081 cacgggcttt ggcgtcttcg acttgctctt cgacttcttg gcgctgggcg ccgacatgga
     1141 tcggccccat gcgggtttcc ttgctcatgc cgttgccgac ggtcttcttt ttcaagattt
     1201 ccaccagtgc gccgatgaaa ttgtcggcga tggattcttg caggaacaaa cgcttcacgc
     1261 ccaagcacat ctggccgcag ttaaaatagc ggccgacatc ggccatcttc accgccaggt
     1321 cgacattgct gtcttccatg acgatcattg gatcgctgcc gcccaattcc agagtcacac
     1381 gcttgatttc gcggccagcg acttccatga catggcggcc gattggcgtc gatccggtaa
     1441 aggcgatgcg gcgcacgcgc ggattgcgca ggagttcttc gccgacgctg ccgccggggc
     1501 cggtgacaat attcaccgtg cctttgggca atggtttttg cgctttgcct tcgccgaagg
     1561 tcgcctgggc gatgagttcg atgactttga tcgtcgccaa cggcgtggtg ctagccggct
     1621 tgatgatgat cgtgttgcca gcggccaacg ctggacccaa cttggtgccc attaaagtca
     1681 gcgggaaatt ccatggcacg atgccgccgc acacgccgat cggttggcgc acgaccatgc
     1741 cgtaggcgtt tttctgcggc agcggcacat gggagccgcg cactttggag gcgaggccgg
     1801 cgtagaattc cagcccatga acgagatgat gaatctccaa gcccgcttcg aacaatgtct
     1861 tgccttgctc ttgggtaagt agttgggcga tttccgcggt atttttcttg atcagctcgc
     1921 cggcgttcat cagcgcattg ccgcgatctt ccggcgagac atcggcccag accttaaaag
     1981 cgtcttccgc cgcggagatc gcttgctgga cgtccttgtc attgccctgc ggtaccgtgt
     2041 cgaccgtcgc gccggtggcg ggattacgta cctcgctagt attcttggtt actgaatcga
     2101 cggattcgcc gccgatgaac atcttggcca ttacttaacc tccatgaaag taaaaagtta
     2161 aaaggaaaaa gtaaaaagcc gtccgagtaa aagttttagc tttttaattt tgaattttgc
     2221 cctggctggt tatttgccgg tgaatttcgc cgtgcgtttt tccagata
//
LOCUS       DATIRS010001298         1846 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Deferrimicrobium sp. isolate SMAG_U15909
            k141_196312, whole genome shotgun sequence.
ACCESSION   DATIRS010001298 DATIRS010000000
VERSION     DATIRS010001298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37936619
            Sequence Read Archive: SRR9691031
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Deferrimicrobium sp. (soil metagenome)
  ORGANISM  Candidatus Deferrimicrobium sp.
            Bacteria; Candidatus Deferrimicrobiota; Candidatus Deferrimicrobia;
            Candidatus Deferrimicrobiales; Candidatus Deferrimicrobiaceae;
            Candidatus Deferrimicrobium.
REFERENCE   1  (bases 1 to 1846)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1846)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/04/2024 08:36:34
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,344
            CDSs (total)                      :: 3,340
            Genes (coding)                    :: 3,311
            CDSs (with protein)               :: 3,311
            Genes (RNA)                       :: 4
            tRNAs                             :: 3
            ncRNAs                            :: 1
            Pseudo Genes (total)              :: 29
            CDSs (without protein)            :: 29
            Pseudo Genes (ambiguous residues) :: 0 of 29
            Pseudo Genes (frameshifted)       :: 3 of 29
            Pseudo Genes (incomplete)         :: 16 of 29
            Pseudo Genes (internal stop)      :: 14 of 29
            Pseudo Genes (multiple problems)  :: 4 of 29
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1846
                     /organism="Candidatus Deferrimicrobium sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196312"
                     /isolate="SMAG_U15909"
                     /isolation_source="soil"
                     /db_xref="taxon:3060586"
                     /environmental_sample
                     /country="China"
                     /lat_lon="31.6 N 100 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..347)
                     /locus_tag="VLM90_16715"
     CDS             complement(<1..347)
                     /locus_tag="VLM90_16715"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HSQ14671.1"
                     /translation="MAGCLDGIKVLELGNFISGPYGAMLLADMGAEVIKVENPKGGDP
                     FRGWDFGGDQPNFWAYNRGKKSVTLNLQTPEGREVFYGLVKQSDVVMDNYRPGATKKL
                     GIDFESLSKINPK"
     gene            485..>1846
                     /locus_tag="VLM90_16720"
     CDS             485..>1846
                     /locus_tag="VLM90_16720"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HSQ14672.1"
                     /translation="MATPPPVTDLLARFVNDTDMSTMSGKTLAEAKLHILDTLGVALA
                     GVSTEVAAIALNYCQGLGARNESSIWGTPAKASVSTAAFANGLLAHALDYDDWDAFIH
                     VGHPSSMIVGAALPLAEHLGASGQDLLKAYVLGIEVICKIAANAPNVQDRGFHSTPVF
                     GSLGATIACASLLKLPIDKIKAALGVAASGAGGIHRQQGSMVKPFHAGNSARNGAEAA
                     ILASKGFTADAAIFEAPRGFCDTFFGPDTCDYDKMVTNIGAPYFLDSPGIGLKWHPCS
                     APQFLAADAALQLKRQHKINFADVAKMEVSIPPKRYARHYSAEVKTGLRGKFAINYVV
                     AMCFLDGKLEIATFTDEKVNRPEVQDAFNKVQVICDESIPEPGPYCPVSVELKNGTRH
                     SYTAKVAKGDPRNPMTEDEVTEKFLGNVKTVLSEDRARNLVTAVQNLETVDNVQKLAS
                     LLTP"
BASE COUNT          400 a          602 c          476 g          368 t
ORIGIN      
        1 attttcggat tgatcttgct cagcgactcg aagtcgatgc cgagcttctt ggtcgcgccg
       61 ggacgatagt tatccatcac cacgtcagac tgcttgacca aaccgtagaa gacttccctg
      121 ccttcgggag tttgcaaatt cagcgtgacg ctcttcttgc cgcgattata ggcccagaag
      181 ttcggctgat cgccgccgaa atcccaaccg cgaaacgggt cgccgccctt gggattctcg
      241 actttaataa cttccgcgcc catgtccgcc agcaacatcg cgccgtacgg tccggaaata
      301 aaattaccca actccaaaac cttgatgccg tctaaacaac ctgccatcgt tacatctcct
      361 ctttcgatct gaaatatgaa atctggaatc tgaaattcct cgcgccagcg aggcccgcct
      421 gttgcctagt ggcgccttaa tccggtaatg aactttcata tcgtccattt cgcgggagaa
      481 caagatggca acacctcctc cggtcaccga cctgctcgca cgctttgtta acgacactga
      541 catgtcgacc atgtcgggga aaactttggc cgaagccaag ctgcatatcc tcgacaccct
      601 cggcgtcgcc cttgctggcg tgtccaccga ggtcgcggcg atcgcgctca attattgcca
      661 aggactgggc gcgcgtaacg agtcgtcgat ctggggcacc ccggcaaaag cctctgtcag
      721 caccgccgcc ttcgccaatg gcctgctggc ccacgccctc gattacgacg actgggatgc
      781 ctttatccat gtcggtcatc cgtcgagtat gatcgtcggc gcggcgttgc cgttggcaga
      841 gcatctcggc gcttccggcc aagacctgct caaagcctac gtgctcggca tcgaagtgat
      901 ttgtaagatc gccgccaacg cgcccaatgt ccaggaccgc ggctttcaca gcacgccggt
      961 ctttggcagc ctcggcgcca ccatcgcctg tgccagcttg ttgaagcttc ccatcgacaa
     1021 aatcaaagcc gctctcggtg tcgccgcctc cggcgccggc ggtatccatc gtcagcaagg
     1081 atcgatggtg aaaccctttc atgccggcaa ttccgcgcgc aacggcgccg aggctgcaat
     1141 cctggcgagc aaagggttca ccgcggacgc cgccatcttc gaggcgccgc gcggcttctg
     1201 cgacaccttc ttcggcccgg acacctgcga ttacgataaa atggtgacca acatcggcgc
     1261 accttacttt ctcgattcgc ccggcattgg cctcaaatgg cacccatgca gcgcgccgca
     1321 gttcctcgcc gccgacgccg cgttgcaatt gaagcgtcaa cacaaaatca attttgccga
     1381 tgtcgccaag atggaagtca gcattccgcc caaacgctac gcgcgccact actcggccga
     1441 ggtcaaaacc ggcctgcgcg gcaagttcgc catcaactac gtcgtcgcca tgtgcttcct
     1501 cgacggcaag ttggagatcg cgaccttcac cgacgaaaag gtcaaccggc cggaagtcca
     1561 agacgccttc aacaaagtcc aggtcatctg cgacgagtcg atccccgaac ccggccccta
     1621 ctgtccggtt agcgtcgagc tgaaaaacgg cacccgccat agttacacgg cgaaggtcgc
     1681 taaaggcgac ccgcgcaacc ccatgaccga agatgaagtg accgagaaat ttctcggcaa
     1741 cgtgaaaacg gtgctatccg aggatcgcgc gcgcaattta gtgacagcgg tgcaaaatct
     1801 tgaaaccgtc gacaacgtgc aaaagctggc gagcctgctg acgccg
//
